BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 040279
         (626 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|359479583|ref|XP_002275680.2| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Vitis vinifera]
 gi|297735515|emb|CBI17955.3| unnamed protein product [Vitis vinifera]
          Length = 627

 Score =  618 bits (1593), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 313/590 (53%), Positives = 407/590 (68%), Gaps = 42/590 (7%)

Query: 14  ETVSKVKLSSLFKSP------------RQIAAVSSPETQLNEFLHENCKSGIINLNEARY 61
            T  + KLSSLF+ P            +   + +    QL  FL  NCKSG I  +EA  
Sbjct: 19  RTTPRCKLSSLFEHPHRPISPGPISLTKDTVSNAPDRGQLENFLKSNCKSGHIKRSEAFS 78

Query: 62  FFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFG 121
            F ++  MQP+PPISSFN L GAVAK + Y  VIS Y+++  IGL PDF+TLNILINC+ 
Sbjct: 79  VFNHLIDMQPTPPISSFNTLLGAVAKIKRYFDVISLYKRMSLIGLAPDFITLNILINCYC 138

Query: 122 NKE----------------------------RGLCVENRIKEATWLFKNMIAFGVRPDVI 153
           N                              +GLC+ +RI EAT L + M+  G RP+V+
Sbjct: 139 NLNKVDFGLAVLGEMLRRGHSPNTVTFTSLVKGLCLGSRISEATGLLRKMVRMGYRPNVV 198

Query: 154 TYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAK 213
           TYGTL+NG C TGN  +A++LH++M++G+   G+  K N+  Y  IIDSLCK+GL+DK K
Sbjct: 199 TYGTLLNGLCMTGNTMLAVKLHEEMLNGNGGFGVTIKPNLVCYCTIIDSLCKDGLIDKGK 258

Query: 214 ELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCL 273
           ELFLEMKGRGI+P VV  +++IHG C  G WE   GLF EM+D G  PN++TFNV+ID L
Sbjct: 259 ELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEGVHPNVVTFNVLIDAL 318

Query: 274 CKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTV 333
           CK GK+ EAN LL+LMIQRG +PD FTYN+L+DG+CL GRID AR++F+SM SKG +   
Sbjct: 319 CKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGFCLEGRIDDARDLFVSMESKGIETDA 378

Query: 334 VSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDE 393
           VSYN+LINGYCK   + EA  LYR+++   +  TVITYNTLL+GLF+ G+   A  LF E
Sbjct: 379 VSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNTLLTGLFREGKVRDAWNLFGE 438

Query: 394 MKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGR 453
           MK++++ P+  TYNIL+DGLCKNN + EA++LFH LE + F+  I+IFNCLIDGLCKA +
Sbjct: 439 MKVHDLTPESCTYNILLDGLCKNNHLSEAMELFHYLENHDFQPSIQIFNCLIDGLCKARK 498

Query: 454 LDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNT 513
           ++ A ELF++L  +GL P V+TY++MIHGLC+ G+LE A D  L ME+ GCAPN+VTFNT
Sbjct: 499 IEIARELFNRLSHEGLEPNVITYTVMIHGLCKSGQLENAKDLFLGMEEKGCAPNLVTFNT 558

Query: 514 LMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
           LM GF QN++  KVVELL +MA  E++  PD +T SIVVDLL+KDEKY E
Sbjct: 559 LMRGFCQNDEMQKVVELLQEMA--EKDFSPDASTISIVVDLLSKDEKYRE 606



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 112/396 (28%), Positives = 195/396 (49%), Gaps = 13/396 (3%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
           P +  +  +  ++ K+   D     + ++   G+ PD +  + +I+       G+C   R
Sbjct: 236 PNLVCYCTIIDSLCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIH-------GMCHTGR 288

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
            + A  LF  M+  GV P+V+T+  LI+  C+ G +  A  L K M+            +
Sbjct: 289 WEGAKGLFNEMVDEGVHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRG------ESPD 342

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
            F+Y+ +ID  C EG +D A++LF+ M+ +GI    V    LI+G+C +G   E   L+ 
Sbjct: 343 TFTYNTLIDGFCLEGRIDDARDLFVSMESKGIETDAVSYNVLINGYCKSGRMVEAKKLYR 402

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
           EM+     P ++T+N ++  L + GK+ +A  L   M    L P+  TYN L+DG C   
Sbjct: 403 EMMCKEIMPTVITYNTLLTGLFREGKVRDAWNLFGEMKVHDLTPESCTYNILLDGLCKNN 462

Query: 313 RIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYN 372
            +  A E+F  + +   + ++  +N LI+G CK   +E A  L+ ++   G+   VITY 
Sbjct: 463 HLSEAMELFHYLENHDFQPSIQIFNCLIDGLCKARKIEIARELFNRLSHEGLEPNVITYT 522

Query: 373 TLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMN 432
            ++ GL ++GQ   A+ LF  M+     P+L T+N L+ G C+N+ +Q+ V+L   +   
Sbjct: 523 VMIHGLCKSGQLENAKDLFLGMEEKGCAPNLVTFNTLMRGFCQNDEMQKVVELLQEMAEK 582

Query: 433 KFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKG 468
            F       + ++D L K  +      L    P +G
Sbjct: 583 DFSPDASTISIVVDLLSKDEKYREYLHLLPTFPAQG 618


>gi|449520325|ref|XP_004167184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 605

 Score =  560 bits (1444), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 284/581 (48%), Positives = 388/581 (66%), Gaps = 34/581 (5%)

Query: 12  SSETVSKVKLSSLFKSPRQIAAVSSPETQLNEFLHENCKSGIINLNEARYFFGYMTHMQP 71
           S+ ++    LSSLF      +A+ SP  Q+  FL  +CK+G +    A +FF  M    P
Sbjct: 10  SASSIRNSNLSSLFTHS---SAIPSPNPQIAFFL-RHCKTGNVTATHALHFFHLMMRSTP 65

Query: 72  SPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKER------ 125
           +P +SSFN L   +AK +HY  V S Y ++   GL  D  TLNIL+NC  N  R      
Sbjct: 66  TPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNILLNCLCNVNRLREGFA 125

Query: 126 ----------------------GLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFC 163
                                 GLC+E+RI EAT LF  M   G  PDV+TYGTLI G C
Sbjct: 126 AFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLC 185

Query: 164 RTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRG 223
            TGN+++AL+LH++M++      +  K N+ +Y+II+D LCK G  D+AK+LF EMK +G
Sbjct: 186 GTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQG 245

Query: 224 INPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEAN 283
           + P+++   +LIHGFCCAG WEE   L  EMLD G +P+++TFNV+ID LCK GK+ EA 
Sbjct: 246 MIPSIISYNSLIHGFCCAGKWEESKRLLDEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAK 305

Query: 284 GLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGY 343
            LL +MI+ G+ PD  TYNSL++G+C+VG +++ARE+F+SM SKGC+  V+SYN+LINGY
Sbjct: 306 KLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGY 365

Query: 344 CKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDL 403
            K L VEEAM LY +++  G R  VITY++LL G+F AG+   A+KLF  MK + +  + 
Sbjct: 366 SKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENS 425

Query: 404 STYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHK 463
            TY I +DGLCKN+C+ EA+KLF  L+ + F+  IE  NCLIDGLCKAG+L+ AWELF K
Sbjct: 426 YTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEK 485

Query: 464 LPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNK 523
           L  +G  P VVTY+IMIHG CR+G+++KAN  +  ME NGC P+++T+NTLM GF ++NK
Sbjct: 486 LSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNK 545

Query: 524 TSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHEC 564
             +VV+LLH+MA  ++++ PD  T SIVVD+L+KDEKY EC
Sbjct: 546 LEEVVQLLHRMA--QKDVSPDAITCSIVVDMLSKDEKYQEC 584



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 107/398 (26%), Positives = 202/398 (50%), Gaps = 14/398 (3%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
           P + ++N++   + K    D     + ++ + G++P  ++ N LI+       G C   +
Sbjct: 213 PNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPSIISYNSLIH-------GFCCAGK 265

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
            +E+  L   M+  G++PD++T+  LI+  C+ G +  A +L   M+    E+G++   +
Sbjct: 266 WEESKRLLDEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMI----ESGIVP--D 319

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
           + +Y+ +I+  C  G ++ A+ELF+ M  +G  P V+    LI+G+      EE   L+ 
Sbjct: 320 LVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYN 379

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
           EML +G RPN++T++ ++  +   GK+++A  L  +M   G+  + +TY   +DG C   
Sbjct: 380 EMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKND 439

Query: 313 RIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYN 372
            +  A ++F  + S   K  + + N LI+G CK   +E A  L+ ++ + G    V+TY 
Sbjct: 440 CLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYT 499

Query: 373 TLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMN 432
            ++ G  + GQ   A  L  +M+     PD+ TYN L+ G  ++N ++E V+L H +   
Sbjct: 500 IMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQK 559

Query: 433 KFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLP-QKGL 469
                    + ++D L K  +      L  + P QKG+
Sbjct: 560 DVSPDAITCSIVVDMLSKDEKYQECLHLLPRFPIQKGV 597



 Score = 92.4 bits (228), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 61/231 (26%), Positives = 107/231 (46%), Gaps = 4/231 (1%)

Query: 384 AGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNC 443
           A +A   F  M      P LS++N L+ GL K     +   L++ + ++         N 
Sbjct: 50  ATHALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNI 109

Query: 444 LIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNG 503
           L++ LC   RL   +  F  + ++G  P +VTY+ +I GLC + ++ +A    L M+K G
Sbjct: 110 LLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLG 169

Query: 504 CAPNVVTFNTLMHGFLQNNKTSKVV----ELLHKMAEPERNLVPDDTTFSIVVDLLAKDE 559
           C P+VVT+ TL+ G       +  +    E+L+ ++  E N  P+  T++I+VD L K  
Sbjct: 170 CTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVG 229

Query: 560 KYHECSAVSKSSYRACLYVTIFQPSSLGSMIGCTVRLMPQPEMSDTLGDDG 610
           +  E   + +      +  +I   +SL     C  +      + D + D G
Sbjct: 230 REDEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKRLLDEMLDQG 280


>gi|449529622|ref|XP_004171797.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 618

 Score =  543 bits (1398), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 279/585 (47%), Positives = 379/585 (64%), Gaps = 35/585 (5%)

Query: 12  SSETVSKVKLSSLFKSPRQI--AAVSSPETQLNEFLH---ENCKSGIINLNEARYFFGYM 66
           SS   S +  +S    P  I  AA +  E   +  L     NCK+G I   +A +FF  M
Sbjct: 23  SSTIPSSIPQTSSTHHPNPILPAAFNREEISFHHPLSLFLRNCKTGNITAIQAFHFFDLM 82

Query: 67  THMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKER- 125
               P PPISSFN L G +AK  HY  + S Y ++   GL PD  TL+IL NC  N  R 
Sbjct: 83  MRSHPIPPISSFNRLLGGLAKINHYSQLFSLYNEMRLAGLSPDLFTLSILANCLCNVNRV 142

Query: 126 ---------------------------GLCVENRIKEATWLFKNMIAFGVRPDVITYGTL 158
                                      GLC+E+RI EAT LF  M   G  P+ +TYGTL
Sbjct: 143 SEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRISEATRLFLRMQKLGCTPNAVTYGTL 202

Query: 159 INGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLE 218
           I G C+TGN+++AL+LHK+M++   + G+  K  + +YSIIID LCK G  D+AKELF E
Sbjct: 203 IKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVITYSIIIDGLCKVGREDEAKELFEE 262

Query: 219 MKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGK 278
           MK +G+ P V+  +TLIHGFCCAG W++   LF EM+D G +P+++TF+V+ID LCK GK
Sbjct: 263 MKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQPDMVTFSVLIDTLCKEGK 322

Query: 279 INEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNI 338
           + EA  LLE+MIQRG+ P+  TYNSL+DG+C+VG +++ARE+FLSM SKG +   +SY  
Sbjct: 323 VTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSARELFLSMPSKGLEPDEISYTT 382

Query: 339 LINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYN 398
           LINGYCK   V+EAM+LY +++  G    V TY TLL GLFQ G+ G A+KLF  MK Y 
Sbjct: 383 LINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKVGDAKKLFGVMKTYG 442

Query: 399 VEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAW 458
           V  +   Y I +DGLCKN+C+ EA++LF+ L+   F+  IE ++CLIDGLCKAG+L+ AW
Sbjct: 443 VSANSQIYGIFLDGLCKNDCLFEAMELFNELKSYNFKLNIENYSCLIDGLCKAGKLETAW 502

Query: 459 ELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGF 518
           ELF KL Q+GL P VVTY+IMIHG C+ G+++ AN     ME+NGC P+++ +NTL+ GF
Sbjct: 503 ELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNANILFEKMEENGCTPDIIAYNTLLCGF 562

Query: 519 LQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
            + NK  +V++LLHKM   ++++ P+  + +IVVD+L KDEKY +
Sbjct: 563 CEGNKLEEVIKLLHKMV--QKDVSPNAASCTIVVDMLCKDEKYKK 605



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 111/393 (28%), Positives = 204/393 (51%), Gaps = 13/393 (3%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
           P + +++++   + K    D     + ++ + G++PD ++ + LI+       G C   +
Sbjct: 235 PGVITYSIIIDGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIH-------GFCCAGK 287

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
             ++  LF  M+  GV+PD++T+  LI+  C+ G ++ A +L + M+    + G++   N
Sbjct: 288 WDQSKHLFDEMVDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMI----QRGIVP--N 341

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
           + +Y+ +ID  C  G ++ A+ELFL M  +G+ P  +  TTLI+G+C     +E   L+ 
Sbjct: 342 LITYNSLIDGFCMVGDLNSARELFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYN 401

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
           EML +G  PN+ T+  ++  L + GK+ +A  L  +M   G++ +   Y   +DG C   
Sbjct: 402 EMLQVGKSPNVTTYGTLLKGLFQKGKVGDAKKLFGVMKTYGVSANSQIYGIFLDGLCKND 461

Query: 313 RIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYN 372
            +  A E+F  + S   K  + +Y+ LI+G CK   +E A  L+ ++   G++  V+TYN
Sbjct: 462 CLFEAMELFNELKSYNFKLNIENYSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYN 521

Query: 373 TLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMN 432
            ++ G  + GQ   A  LF++M+     PD+  YN L+ G C+ N ++E +KL H +   
Sbjct: 522 IMIHGFCKVGQVDNANILFEKMEENGCTPDIIAYNTLLCGFCEGNKLEEVIKLLHKMVQK 581

Query: 433 KFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLP 465
                      ++D LCK  +     +L  K P
Sbjct: 582 DVSPNAASCTIVVDMLCKDEKYKKFVDLLPKFP 614



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 59/228 (25%), Positives = 104/228 (45%), Gaps = 4/228 (1%)

Query: 387 AQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLID 446
           A   FD M   +  P +S++N L+ GL K N   +   L++ + +      +   + L +
Sbjct: 75  AFHFFDLMMRSHPIPPISSFNRLLGGLAKINHYSQLFSLYNEMRLAGLSPDLFTLSILAN 134

Query: 447 GLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAP 506
            LC   R+  A      + ++G +P VVTY+ +I GLC + ++ +A    L M+K GC P
Sbjct: 135 CLCNVNRVSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRISEATRLFLRMQKLGCTP 194

Query: 507 NVVTFNTLMHGFLQNNKTSKVV----ELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYH 562
           N VT+ TL+ G  Q    +  +    E+L+  ++   N  P   T+SI++D L K  +  
Sbjct: 195 NAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVITYSIIIDGLCKVGRED 254

Query: 563 ECSAVSKSSYRACLYVTIFQPSSLGSMIGCTVRLMPQPEMSDTLGDDG 610
           E   + +      +   +   S+L     C  +      + D + D G
Sbjct: 255 EAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQG 302


>gi|449520323|ref|XP_004167183.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 605

 Score =  531 bits (1367), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 272/553 (49%), Positives = 360/553 (65%), Gaps = 29/553 (5%)

Query: 17  SKVKLSSLFKSPRQIAAVSSPETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPIS 76
           S V   SL  SP+      S + QL+ FLH NCK+G I   +A  FF  M +  P+PP+S
Sbjct: 39  SAVHHKSLNVSPQNFNTPISFQQQLSMFLH-NCKTGNITATQAFQFFHLMMYSNPTPPLS 97

Query: 77  SFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKER----------- 125
           SF  L   +AK +HY  V   Y ++   G+ PD  TLNIL+NC  N  R           
Sbjct: 98  SFTHLLSGLAKIKHYSQVFYLYNQMRLSGISPDCCTLNILLNCLCNVNRVGEGLAVMAGI 157

Query: 126 -----------------GLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
                            GLC+E+RI +A  LF  M   G  P+ ITYGTL+ G CRTGN+
Sbjct: 158 LRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCTPNAITYGTLMKGLCRTGNI 217

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
           S+AL+LH++M++     G+  K  + SYSIIID+LCK+   D+A++LF EMK +G+ P V
Sbjct: 218 SIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQGMTPTV 277

Query: 229 VVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLEL 288
           +  T+LIHGFCC G WEE   LF EM++ G +PN++TFNV+ID LCK GK+ EA  LLE+
Sbjct: 278 ISYTSLIHGFCCGGKWEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEV 337

Query: 289 MIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILN 348
           MIQRG+ P+  TYNSL++G+CLVG +++ARE+F+SM SKGC+  V+ Y +LINGYCK   
Sbjct: 338 MIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSK 397

Query: 349 VEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNI 408
           VEEAM LY  ++  G R  V TY  LL+GLFQ G+ G A+KLF  MK+Y +  DL  Y I
Sbjct: 398 VEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGI 457

Query: 409 LIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKG 468
            ++GLCKN C+ EA++LF+ L+    +  IE FNCLIDGLCKAG+L+ AWELF KLPQ+ 
Sbjct: 458 FLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEE 517

Query: 469 LVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVV 528
           L P VVTY+IMIH  CR G++ KAN     MEKNGC P+ +T+ TL+ GF ++ K  KVV
Sbjct: 518 LQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNGCTPDKITYATLIRGFFESKKLEKVV 577

Query: 529 ELLHKMAEPERNL 541
           ELLH M + + +L
Sbjct: 578 ELLHMMVQRDVSL 590



 Score =  178 bits (452), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 102/365 (27%), Positives = 189/365 (51%), Gaps = 10/365 (2%)

Query: 204 CKEG--LVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRP 261
           CK G     +A + F  M      P +   T L+ G     ++ +V  L+ +M   G  P
Sbjct: 70  CKTGNITATQAFQFFHLMMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISP 129

Query: 262 NLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIF 321
           +  T N++++CLC   ++ E   ++  +++RG  PD  TY +L+ G C+  RI  A  +F
Sbjct: 130 DCCTLNILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLF 189

Query: 322 LSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNG------VRQTVITYNTLL 375
             M   GC    ++Y  L+ G C+  N+  A+ L+++++++        +  VI+Y+ ++
Sbjct: 190 TRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIII 249

Query: 376 SGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFE 435
             L +  +   A+ LF+EMK+  + P + +Y  LI G C     +EA +LF+ +     +
Sbjct: 250 DALCKDRREDEARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWEEAKRLFNEMVNQGVQ 309

Query: 436 FGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDF 495
             +  FN LID LCK G++  A +L   + Q+G+VP ++TY+ +I G C  G L  A + 
Sbjct: 310 PNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSAREL 369

Query: 496 LLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLL 555
            + M   GC P+V+ +  L++G+ + +K  + ++L + M +  +   PD  T+  ++  L
Sbjct: 370 FVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKR--PDVKTYGALLTGL 427

Query: 556 AKDEK 560
            +  K
Sbjct: 428 FQGGK 432



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 72/292 (24%), Positives = 125/292 (42%), Gaps = 33/292 (11%)

Query: 274 CKGGKIN--EANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKH 331
           CK G I   +A     LM+     P   ++  L+ G   +        ++  M   G   
Sbjct: 70  CKTGNITATQAFQFFHLMMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISP 129

Query: 332 TVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLF 391
              + NIL+N  C +  V E +++   I+  G    ++TY TL+ GL    +   A  LF
Sbjct: 130 DCCTLNILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLF 189

Query: 392 DEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKA 451
             M+     P+  TY  L+ GLC+   +  A+KL   +  +   +GI             
Sbjct: 190 TRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGIN------------ 237

Query: 452 GRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTF 511
                              P V++YSI+I  LC+  + ++A D    M+  G  P V+++
Sbjct: 238 -----------------FKPVVISYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISY 280

Query: 512 NTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
            +L+HGF    K  +   L ++M    + + P+  TF++++D+L K+ K  E
Sbjct: 281 TSLIHGFCCGGKWEEAKRLFNEMVN--QGVQPNVVTFNVLIDVLCKEGKVIE 330


>gi|255559961|ref|XP_002520999.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223539836|gb|EEF41416.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 628

 Score =  527 bits (1358), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 288/627 (45%), Positives = 388/627 (61%), Gaps = 75/627 (11%)

Query: 1   MASRTQFRCLFSSET----VSKVKLSSLFKS------------------------PRQIA 32
           MA +T    L+++ +     S  KLSSLF S                         + + 
Sbjct: 1   MARKTSSSSLYTATSSLSAASTAKLSSLFTSLHTHAISNLKTSPKISNEQFINFKSKTLP 60

Query: 33  AVSSPETQ----LNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKN 88
             S+P TQ    L +FL  NCKSG   L+EA +FF  M HMQ +P +S FN LFGA+AK 
Sbjct: 61  INSTPNTQSDNPLEQFLEINCKSGDFTLHEALHFFNQMIHMQTTPALSRFNNLFGALAKK 120

Query: 89  RHYDAVISFYRKLVSIGLLPDFLTLNILINC----------------------------F 120
           + Y  VIS   ++ SIGLL +F++LNIL+NC                            F
Sbjct: 121 KQYLHVISMCGRMNSIGLLKNFISLNILLNCLCSVKRVFEGFVVFGMILRKGYRPNTRTF 180

Query: 121 GNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVS 180
            N  +GLC+E +I EA  +FK M  F  RP  IT G LI+G CRTGN   AL+LH+ M++
Sbjct: 181 TNLVKGLCLEGKIGEAVRVFKIMGVFDCRPSAITCGVLISGLCRTGNTCNALKLHEAMIN 240

Query: 181 GDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCC 240
           G+ + G+  K  + SYS IIDSLCK+GLV++AKE F+EMK +GI P VV  T+L+HG C 
Sbjct: 241 GNSDFGINCKPTVVSYSCIIDSLCKDGLVERAKEFFVEMKEKGIFPNVVTYTSLLHGLCS 300

Query: 241 AGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFT 300
           A  WEE   LFIEM+D G  P+++TF+V+I  LCK GK+ EA+GL +LM+QR + P   T
Sbjct: 301 ASEWEEAKRLFIEMVDHGLLPDVVTFSVLIGALCKVGKVKEASGLFDLMVQRYVEPSTRT 360

Query: 301 YNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQII 360
           YN L++GYCL G +D  ++IFLSM +K C+H   SY+IL+  YCK   V  AM LYR+++
Sbjct: 361 YNILIEGYCLAGMVDEGKKIFLSMVNKRCQHDAGSYSILMKAYCKDSEVHGAMILYREMM 420

Query: 361 SNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPD---LSTYNILIDGLCKNN 417
             G++ TVITY+          + G A+KLF E++  ++  D    S YN+ +DGLCKN 
Sbjct: 421 DRGIQPTVITYS----------KVGDARKLFGEIQFQDMVLDSISYSIYNVYLDGLCKNG 470

Query: 418 CVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYS 477
           CV EA+ +F+ LE  KF   + IFN LI+G+C++ +L+ AWELF++L  + L P VVTY+
Sbjct: 471 CVSEALDVFYGLENCKFASNVAIFNSLINGMCRSEKLEIAWELFNRLCNEALQPDVVTYT 530

Query: 478 IMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEP 537
           IMI+GLC+ G+ +KA D  L ME+ GCAPNVVTFNTLM G   N++  K+VELLHKMA  
Sbjct: 531 IMIYGLCKVGQPQKAYDLFLEMEEKGCAPNVVTFNTLMRGLCLNSERPKIVELLHKMA-- 588

Query: 538 ERNLVPDDTTFSIVVDLLAKDEKYHEC 564
            R L PD +T  IV+D+L KDE YHEC
Sbjct: 589 ARKLSPDASTLLIVMDILLKDENYHEC 615



 Score =  115 bits (288), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 84/296 (28%), Positives = 132/296 (44%), Gaps = 33/296 (11%)

Query: 274 CKGGK--INEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKH 331
           CK G   ++EA      MI     P    +N+L        +      +   M+S G   
Sbjct: 81  CKSGDFTLHEALHFFNQMIHMQTTPALSRFNNLFGALAKKKQYLHVISMCGRMNSIGLLK 140

Query: 332 TVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLF 391
             +S NIL+N  C +  V E   ++  I+  G R    T+  L+ GL   G+ G A ++F
Sbjct: 141 NFISLNILLNCLCSVKRVFEGFVVFGMILRKGYRPNTRTFTNLVKGLCLEGKIGEAVRVF 200

Query: 392 DEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKA 451
             M +++  P   T  +LI GLC+      A+KL   +     +FGI          CK 
Sbjct: 201 KIMGVFDCRPSAITCGVLISGLCRTGNTCNALKLHEAMINGNSDFGIN---------CK- 250

Query: 452 GRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTF 511
                              PTVV+YS +I  LC+ G +E+A +F + M++ G  PNVVT+
Sbjct: 251 -------------------PTVVSYSCIIDSLCKDGLVERAKEFFVEMKEKGIFPNVVTY 291

Query: 512 NTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAV 567
            +L+HG    ++  +   L  +M +    L+PD  TFS+++  L K  K  E S +
Sbjct: 292 TSLLHGLCSASEWEEAKRLFIEMVD--HGLLPDVVTFSVLIGALCKVGKVKEASGL 345


>gi|449462479|ref|XP_004148968.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 580

 Score =  515 bits (1326), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 271/581 (46%), Positives = 371/581 (63%), Gaps = 59/581 (10%)

Query: 12  SSETVSKVKLSSLFKSPRQIAAVSSPETQLNEFLHENCKSGIINLNEARYFFGYMTHMQP 71
           S+ ++    LSSLF      +A+ SP  Q+  FL  +CK+G +    A +FF  M    P
Sbjct: 10  SASSIRNSNLSSLFTHS---SAIPSPNPQIAFFL-RHCKTGNVTATHALHFFHLMMRSTP 65

Query: 72  SPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKER------ 125
           +P +SSFN L   +AK +HY  V S Y ++   GL  D  TLNIL+NC  N  R      
Sbjct: 66  TPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNILLNCLCNVNRLREGFA 125

Query: 126 ----------------------GLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFC 163
                                 GLC+E+RI EAT LF  M   G  PDV+TYGTLI G C
Sbjct: 126 AFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLC 185

Query: 164 RTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRG 223
            TGN+++AL+LH++M++      +  K N+ +Y+II+D LCK G  D+AK+LF EMK +G
Sbjct: 186 GTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQG 245

Query: 224 INPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEAN 283
           + P                          EMLD G +P+++TFNV+ID LCK GK+ EA 
Sbjct: 246 MIPN-------------------------EMLDQGLQPDMVTFNVLIDTLCKEGKVIEAK 280

Query: 284 GLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGY 343
            LL +MI+ G+ PD  TYNSL++G+C+VG +++ARE+F+SM SKGC+  V+SYN+LINGY
Sbjct: 281 KLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGY 340

Query: 344 CKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDL 403
            K L VEEAM LY +++  G R  VITY++LL G+F AG+   A+KLF  MK + +  + 
Sbjct: 341 SKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENS 400

Query: 404 STYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHK 463
            TY I +DGLCKN+C+ EA+KLF  L+ + F+  IE  NCLIDGLCKAG+L+ AWELF K
Sbjct: 401 YTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEK 460

Query: 464 LPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNK 523
           L  +G  P VVTY+IMIHG CR+G+++KAN  +  ME NGC P+++T+NTLM GF ++NK
Sbjct: 461 LSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNK 520

Query: 524 TSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHEC 564
             +VV+LLH+MA  ++++ PD  T SIVVD+L+KDEKY EC
Sbjct: 521 LEEVVQLLHRMA--QKDVSPDAITCSIVVDMLSKDEKYQEC 559


>gi|449462477|ref|XP_004148967.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 597

 Score =  504 bits (1299), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 265/553 (47%), Positives = 354/553 (64%), Gaps = 37/553 (6%)

Query: 17  SKVKLSSLFKSPRQIAAVSSPETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPIS 76
           S V   SL  SP+      S + QL+ FLH NCK+G I   +A  FF  M +  P+PP+S
Sbjct: 39  SAVHHKSLNVSPQNFNTPISFQQQLSMFLH-NCKTGNITAIQAFQFFHLMMYSNPTPPLS 97

Query: 77  SFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKER----------- 125
           SF  L   +AK +HY  V   Y ++   G+ PD  TLNIL+NC  N  R           
Sbjct: 98  SFTHLLSGLAKIKHYSQVFYLYNQMRLSGISPDCCTLNILLNCLCNVNRVGEGLAVMAGI 157

Query: 126 -----------------GLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
                            GLC+E+RI +A  LF  M   G  P+ ITYGTL+ G CRTGN+
Sbjct: 158 LRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCTPNAITYGTLMKGLCRTGNI 217

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
           S+AL+LH++M++     G+  K  + SYSIIID+LCK+   D+A++LF EMK +G+ P V
Sbjct: 218 SIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQGMTPTV 277

Query: 229 VVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLEL 288
           +  T+L+        WEE   LF EM++ G +PN++TFNV+ID LCK GK+ EA  LLE+
Sbjct: 278 ISYTSLM--------WEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEV 329

Query: 289 MIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILN 348
           MIQRG+ P+  TYNSL++G+CLVG +++ARE+F+SM SKGC+  V+ Y +LINGYCK   
Sbjct: 330 MIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSK 389

Query: 349 VEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNI 408
           VEEAM LY  ++  G R  V TY  LL+GLFQ G+ G A+KLF  MK+Y +  DL  Y I
Sbjct: 390 VEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGI 449

Query: 409 LIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKG 468
            ++GLCKN C+ EA++LF+ L+    +  IE FNCLIDGLCKAG+L+ AWELF KLPQ+ 
Sbjct: 450 FLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEE 509

Query: 469 LVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVV 528
           L P VVTY+IMIH  CR G++ KAN     MEKNGC P+ +T+ TL+ GF ++ K  KVV
Sbjct: 510 LQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNGCTPDKITYATLIRGFFESKKLEKVV 569

Query: 529 ELLHKMAEPERNL 541
           ELLH M + + +L
Sbjct: 570 ELLHMMVQRDVSL 582



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 97/353 (27%), Positives = 183/353 (51%), Gaps = 18/353 (5%)

Query: 204 CKEGLVD--KAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRP 261
           CK G +   +A + F  M      P +   T L+ G     ++ +V  L+ +M   G  P
Sbjct: 70  CKTGNITAIQAFQFFHLMMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISP 129

Query: 262 NLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIF 321
           +  T N++++CLC   ++ E   ++  +++RG  PD  TY +L+ G C+  RI  A  +F
Sbjct: 130 DCCTLNILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLF 189

Query: 322 LSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNG------VRQTVITYNTLL 375
             M   GC    ++Y  L+ G C+  N+  A+ L+++++++        +  VI+Y+ ++
Sbjct: 190 TRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIII 249

Query: 376 SGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFE 435
             L +  +   A+ LF+EMK+  + P + +Y  L+         +EA +LF+ +     +
Sbjct: 250 DALCKDRREDEARDLFEEMKVQGMTPTVISYTSLM--------WEEAKRLFNEMVNQGVQ 301

Query: 436 FGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDF 495
             +  FN LID LCK G++  A +L   + Q+G+VP ++TY+ +I G C  G L  A + 
Sbjct: 302 PNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSAREL 361

Query: 496 LLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTF 548
            + M   GC P+V+ +  L++G+ + +K  + ++L + M +  +   PD  T+
Sbjct: 362 FVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKR--PDVKTY 412



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 69/292 (23%), Positives = 121/292 (41%), Gaps = 41/292 (14%)

Query: 274 CKGGKIN--EANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKH 331
           CK G I   +A     LM+     P   ++  L+ G   +        ++  M   G   
Sbjct: 70  CKTGNITAIQAFQFFHLMMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISP 129

Query: 332 TVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLF 391
              + NIL+N  C +  V E +++   I+  G    ++TY TL+ GL    +   A  LF
Sbjct: 130 DCCTLNILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLF 189

Query: 392 DEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKA 451
             M+     P+  TY  L+ GLC+   +  A+KL   +  +   +GI             
Sbjct: 190 TRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGI------------- 236

Query: 452 GRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTF 511
                              P V++YSI+I  LC+  + ++A D    M+  G  P V+++
Sbjct: 237 ----------------NFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISY 280

Query: 512 NTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
            +LM          +   L ++M    + + P+  TF++++D+L K+ K  E
Sbjct: 281 TSLMW--------EEAKRLFNEMVN--QGVQPNVVTFNVLIDVLCKEGKVIE 322



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 56/206 (27%), Positives = 95/206 (46%), Gaps = 9/206 (4%)

Query: 367 TVITYNTLLSGLFQAGQAG-----YAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQE 421
           T I++   LS      + G      A + F  M   N  P LS++  L+ GL K     +
Sbjct: 55  TPISFQQQLSMFLHNCKTGNITAIQAFQFFHLMMYSNPTPPLSSFTHLLSGLAKIKHYSQ 114

Query: 422 AVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIH 481
              L++ + ++         N L++ LC   R+     +   + ++G +P +VTY+ +I 
Sbjct: 115 VFYLYNQMRLSGISPDCCTLNILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIK 174

Query: 482 GLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPER-- 539
           GLC + ++ KA      M+K GC PN +T+ TLM G  +    S  ++L  +M       
Sbjct: 175 GLCMEHRISKAALLFTRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLY 234

Query: 540 --NLVPDDTTFSIVVDLLAKDEKYHE 563
             N  P   ++SI++D L KD +  E
Sbjct: 235 GINFKPVVISYSIIIDALCKDRREDE 260


>gi|449444228|ref|XP_004139877.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Cucumis sativus]
 gi|449492643|ref|XP_004159059.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Cucumis sativus]
          Length = 585

 Score =  457 bits (1177), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 253/567 (44%), Positives = 344/567 (60%), Gaps = 74/567 (13%)

Query: 28  PRQIAAVS---SPETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGA 84
           P+ + A+S   S +  L  F+H NCK G I   +A  FF  M        I SFNLL GA
Sbjct: 47  PKSLHALSERISLQHGLPMFIH-NCKKGNITSTQALQFFDLMMR-----SIISFNLLLGA 100

Query: 85  VAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKER------------------- 125
           +AK +HY  V S Y+K+   GL P+F TLNILINC  N  R                   
Sbjct: 101 LAKIKHYSQVFSLYKKMHLAGLSPNFFTLNILINCLCNVNRVREGLSAMAGIMRRGYIPD 160

Query: 126 ---------GLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHK 176
                    GLC+E+RI EAT LF  M   G  P+V+TYGTLI G CRTGN+++AL+LH+
Sbjct: 161 VVTYTSLIKGLCMEHRISEATRLFIRMQKLGCWPNVVTYGTLIKGLCRTGNINLALKLHQ 220

Query: 177 KMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIH 236
           +M++G     +  K NIFSY+IIID LCK                               
Sbjct: 221 EMLNGTSPYAINCKPNIFSYNIIIDELCK------------------------------- 249

Query: 237 GFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNP 296
                G W+E   LF EM+D G RP+++TF+ +ID LCK G + EA   LE M+ RG+ P
Sbjct: 250 ----IGKWKEAKRLFNEMVDQGVRPDVVTFSALIDTLCKEGMVIEAKKFLETMMLRGIVP 305

Query: 297 DRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLY 356
           D FT+ SL++G+CLVG +D+A+E+FLSM SKG +  V+SY +LI GYCK  NVEEAM LY
Sbjct: 306 DLFTFTSLIEGFCLVGDLDSAKELFLSMPSKGYEPDVISYTVLIYGYCKTFNVEEAMKLY 365

Query: 357 RQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKN 416
            +++  G    + T+  LL GLF AG+ G A+KLF  +K + V  +L   ++ +DGLCKN
Sbjct: 366 NEMLRVGKWPDMKTFCVLLKGLFLAGKVGDAKKLFGVVKPHAVPKNLYICSVFLDGLCKN 425

Query: 417 NCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTY 476
            C+ EA++LF+ L+    +  IE FNCLIDGLCKA +L+ AWELF KL Q+GL P VVTY
Sbjct: 426 GCLFEAMELFNELKSYNMKLDIESFNCLIDGLCKARKLETAWELFEKLSQEGLQPDVVTY 485

Query: 477 SIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAE 536
            IMI+G C+ G+++ AN     ME+NGC PN++T++ L+HGF +NNK  +VV+LLHKM +
Sbjct: 486 CIMINGFCKNGQVDNANILFQMMEENGCTPNLLTYSALLHGFYKNNKLEEVVKLLHKMIQ 545

Query: 537 PERNLVPDDTTFSIVVDLLAKDEKYHE 563
            + +L    + ++IV D+++KDEK  E
Sbjct: 546 KDVSLAA--SIYTIVEDMVSKDEKCRE 570


>gi|449444222|ref|XP_004139874.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Cucumis sativus]
 gi|449492651|ref|XP_004159061.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Cucumis sativus]
          Length = 588

 Score =  449 bits (1154), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 249/569 (43%), Positives = 340/569 (59%), Gaps = 75/569 (13%)

Query: 23  SLFKSPRQIAAVSSPETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLF 82
           SL  SP +I    S +  +  FLH+ CK+G I++ +A  FF  M        I SFN L 
Sbjct: 49  SLHASPERI----SFQHGIPMFLHK-CKTGSISVTQAHQFFDLMMR-----SIFSFNRLL 98

Query: 83  GAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKER----------------- 125
             +AK  HY  V S Y+++   GL PD LTLNILINC  N  R                 
Sbjct: 99  AGLAKIEHYSQVFSLYKQMHLAGLWPDLLTLNILINCLCNVNRINEGLAAMAGIMRRGYI 158

Query: 126 -----------GLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRL 174
                      GLCVE+RI EAT LF  M   G  P+V+TYGTLI G C  GN+++AL+ 
Sbjct: 159 PDVVTFTTLIKGLCVEHRIIEATKLFMRMQKLGCTPNVVTYGTLIKGLCALGNINIALKW 218

Query: 175 HKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTL 234
           H++M++         + N+ SYSIIID                                 
Sbjct: 219 HQEMLNDTSPYVFNCRPNVISYSIIID--------------------------------- 245

Query: 235 IHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGL 294
             G C  GNWEE   LF EM+D G +PN++TF+V+ID LCK G++ +A  LLE+MIQ G+
Sbjct: 246 --GLCKVGNWEEAICLFNEMVDQGVQPNVVTFSVLIDMLCKEGQVIKAKKLLEMMIQIGI 303

Query: 295 NPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMS 354
            P+ FTY SL+ G+CLVG +++A+E+F+SM SKG +  V+SYN+LINGYCK L VEEAM 
Sbjct: 304 VPNLFTYTSLIKGFCLVGDLNSAKELFVSMPSKGYEPDVISYNMLINGYCKTLKVEEAMK 363

Query: 355 LYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLC 414
           L+ +++  G+   V T   LL  LF AG+   A++LF  +K Y +  DL    I +DGLC
Sbjct: 364 LFNEMLHVGMWPDVKTSGVLLKALFLAGKVDDAKELFRVIKPYAMPKDLCICCIFLDGLC 423

Query: 415 KNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVV 474
           KN  + EA+KLF+ LE    +  IE F CLIDGLCKAG+L+ AWELF KL ++G+ P  +
Sbjct: 424 KNGYIFEAMKLFNELESYNMKLDIETFGCLIDGLCKAGKLETAWELFEKLYEEGIQPDAM 483

Query: 475 TYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKM 534
            YS MIHG C+KG+++KAN     ME+NGC+P+++T++ LM GF ++NK  KVV+LLH+M
Sbjct: 484 AYSSMIHGFCKKGQVDKANILFQKMEENGCSPDLITYSILMRGFYESNKLEKVVQLLHRM 543

Query: 535 AEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
              E+++ PDD  ++IV D++ KDEKY E
Sbjct: 544 I--EKDVWPDDGIYAIVEDMVCKDEKYKE 570


>gi|147768816|emb|CAN62673.1| hypothetical protein VITISV_031897 [Vitis vinifera]
          Length = 653

 Score =  405 bits (1042), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 215/531 (40%), Positives = 312/531 (58%), Gaps = 36/531 (6%)

Query: 56  LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNI 115
           L+EA   F  M H QP P    FN L  ++AK +H+  ++S  R++ S G+ PD  TL I
Sbjct: 51  LDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAI 110

Query: 116 LIN--CFGNKE--------------------------RGLCVENRIKEATWLFKNMIAFG 147
           +IN  C  N+                           RGLCVE +I EA  LF  MI  G
Sbjct: 111 VINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEG 170

Query: 148 VRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEG 207
            +P+V+TYGTLING C+ GN S A+RL + M  G+       + N+  +S +IDSLCK+ 
Sbjct: 171 FQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGN------CQPNVVVFSTLIDSLCKDR 224

Query: 208 LVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFN 267
            V +A  +F EM  +GI+P +V   +LIHG C    W+ V  L  EM+D    P++ T N
Sbjct: 225 QVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLN 284

Query: 268 VMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSK 327
            ++D LCK G + EA+ ++++MI RG+ P+  TYN+LMDG+CL   +D A ++F +M  K
Sbjct: 285 TVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHK 344

Query: 328 GCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYA 387
            C   V+SYN LINGYCKI +V++AM L+ ++    +    +TYNTL+ GL   G+   A
Sbjct: 345 DCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDA 404

Query: 388 QKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDG 447
             LF EM      PDL TY  L D LCKN  + +A+ L   +E + ++  I+I+  ++DG
Sbjct: 405 ISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDG 464

Query: 448 LCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPN 507
           +C+AG L++A +LF  L  KGL P V TY+IMIHGLC++G L +A+     M KNGC+PN
Sbjct: 465 MCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPN 524

Query: 508 VVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKD 558
             T+N +  GFL+NN+  + +ELL +M    R    D +T +++V +L+ D
Sbjct: 525 DCTYNLITRGFLRNNEALRTIELLEEML--ARGFSVDVSTTTLLVGMLSDD 573



 Score =  195 bits (495), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 109/353 (30%), Positives = 177/353 (50%), Gaps = 2/353 (0%)

Query: 218 EMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGG 277
           +M   GI P V     +I+  C     +       ++L LG +P+  TF  +I  LC  G
Sbjct: 95  QMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEG 154

Query: 278 KINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYN 337
           KI EA  L + MI  G  P+  TY +L++G C VG    A  +  SM    C+  VV ++
Sbjct: 155 KIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFS 214

Query: 338 ILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLY 397
            LI+  CK   V EA +++ ++I+ G+   ++TYN+L+ GL +  +  +   L +EM   
Sbjct: 215 TLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDS 274

Query: 398 NVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNA 457
            + PD+ T N ++D LCK   V EA  +  M+     E  +  +N L+DG C    +D A
Sbjct: 275 KIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVA 334

Query: 458 WELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHG 517
            ++F  +  K  V  V++Y+ +I+G C+   ++KA      M +    PN VT+NTL+HG
Sbjct: 335 VKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHG 394

Query: 518 FLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKS 570
                +    + L H+M    R  +PD  T+  + D L K+    +  A+ K+
Sbjct: 395 LCHVGRLQDAISLFHEMV--ARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKA 445



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 117/370 (31%), Positives = 190/370 (51%), Gaps = 14/370 (3%)

Query: 55  NLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLN 114
            + EA   F  M     SP I ++N L   + K   +  V +   ++V   ++PD  TLN
Sbjct: 225 QVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLN 284

Query: 115 ILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRL 174
            +++        LC E  + EA  +   MI  GV P+V+TY  L++G C    + VA+++
Sbjct: 285 TVVD-------ALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKV 337

Query: 175 HKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTL 234
              MV  D         N+ SY+ +I+  CK   VDKA  LF EM  + + P  V   TL
Sbjct: 338 FDTMVHKD------CVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTL 391

Query: 235 IHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGL 294
           IHG C  G  ++   LF EM+  G  P+L+T+  + D LCK   +++A  LL+ +     
Sbjct: 392 IHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNW 451

Query: 295 NPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMS 354
           +PD   Y +++DG C  G ++ AR++F ++ SKG +  V +YNI+I+G CK   + EA  
Sbjct: 452 DPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASK 511

Query: 355 LYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLC 414
           L+ ++  NG      TYN +  G  +  +A    +L +EM       D+ST  +L+ G+ 
Sbjct: 512 LFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLV-GML 570

Query: 415 KNNCVQEAVK 424
            ++ + ++VK
Sbjct: 571 SDDGLDQSVK 580


>gi|225452994|ref|XP_002263091.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 588

 Score =  405 bits (1042), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 215/531 (40%), Positives = 312/531 (58%), Gaps = 36/531 (6%)

Query: 56  LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNI 115
           L+EA   F  M H QP P    FN L  ++AK +H+  ++S  R++ S G+ PD  TL I
Sbjct: 51  LDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAI 110

Query: 116 LIN--CFGNKE--------------------------RGLCVENRIKEATWLFKNMIAFG 147
           +IN  C  N+                           RGLCVE +I EA  LF  MI  G
Sbjct: 111 VINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEG 170

Query: 148 VRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEG 207
            +P+V+TYGTLING C+ GN S A+RL + M  G+       + N+  +S +IDSLCK+ 
Sbjct: 171 FQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGN------CQPNVVVFSTLIDSLCKDR 224

Query: 208 LVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFN 267
            V +A  +F EM  +GI+P +V   +LIHG C    W+ V  L  EM+D    P++ T N
Sbjct: 225 QVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLN 284

Query: 268 VMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSK 327
            ++D LCK G + EA+ ++++MI RG+ P+  TYN+LMDG+CL   +D A ++F +M  K
Sbjct: 285 TVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHK 344

Query: 328 GCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYA 387
            C   V+SYN LINGYCKI +V++AM L+ ++    +    +TYNTL+ GL   G+   A
Sbjct: 345 DCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDA 404

Query: 388 QKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDG 447
             LF EM      PDL TY  L D LCKN  + +A+ L   +E + ++  I+I+  ++DG
Sbjct: 405 ISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDG 464

Query: 448 LCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPN 507
           +C+AG L++A +LF  L  KGL P V TY+IMIHGLC++G L +A+     M KNGC+PN
Sbjct: 465 MCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPN 524

Query: 508 VVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKD 558
             T+N +  GFL+NN+  + +ELL +M    R    D +T +++V +L+ D
Sbjct: 525 DCTYNLITRGFLRNNEALRTIELLEEML--ARGFSVDVSTTTLLVGMLSDD 573



 Score =  195 bits (496), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 109/353 (30%), Positives = 177/353 (50%), Gaps = 2/353 (0%)

Query: 218 EMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGG 277
           +M   GI P V     +I+  C     +       ++L LG +P+  TF  +I  LC  G
Sbjct: 95  QMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEG 154

Query: 278 KINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYN 337
           KI EA  L + MI  G  P+  TY +L++G C VG    A  +  SM    C+  VV ++
Sbjct: 155 KIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFS 214

Query: 338 ILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLY 397
            LI+  CK   V EA +++ ++I+ G+   ++TYN+L+ GL +  +  +   L +EM   
Sbjct: 215 TLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDS 274

Query: 398 NVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNA 457
            + PD+ T N ++D LCK   V EA  +  M+     E  +  +N L+DG C    +D A
Sbjct: 275 KIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVA 334

Query: 458 WELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHG 517
            ++F  +  K  V  V++Y+ +I+G C+   ++KA      M +    PN VT+NTL+HG
Sbjct: 335 VKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHG 394

Query: 518 FLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKS 570
                +    + L H+M    R  +PD  T+  + D L K+    +  A+ K+
Sbjct: 395 LCHVGRLQDAISLFHEMV--ARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKA 445



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 117/369 (31%), Positives = 190/369 (51%), Gaps = 14/369 (3%)

Query: 56  LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNI 115
           + EA   F  M     SP I ++N L   + K   +  V +   ++V   ++PD  TLN 
Sbjct: 226 VTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNT 285

Query: 116 LINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLH 175
           +++        LC E  + EA  +   MI  GV P+V+TY  L++G C    + VA+++ 
Sbjct: 286 VVD-------ALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVF 338

Query: 176 KKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLI 235
             MV  D         N+ SY+ +I+  CK   VDKA  LF EM  + + P  V   TLI
Sbjct: 339 DTMVHKD------CVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLI 392

Query: 236 HGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLN 295
           HG C  G  ++   LF EM+  G  P+L+T+  + D LCK   +++A  LL+ +     +
Sbjct: 393 HGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWD 452

Query: 296 PDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSL 355
           PD   Y +++DG C  G ++ AR++F ++ SKG +  V +YNI+I+G CK   + EA  L
Sbjct: 453 PDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKL 512

Query: 356 YRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCK 415
           + ++  NG      TYN +  G  +  +A    +L +EM       D+ST  +L+ G+  
Sbjct: 513 FSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLV-GMLS 571

Query: 416 NNCVQEAVK 424
           ++ + ++VK
Sbjct: 572 DDGLDQSVK 580


>gi|225451354|ref|XP_002275019.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 744

 Score =  405 bits (1041), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 222/565 (39%), Positives = 326/565 (57%), Gaps = 39/565 (6%)

Query: 25  FKSPRQIAAVSSPETQLNEFLHENCKSGIINLN---EARYFFGYMTHMQPSPPISSFNLL 81
           F SP   A + SP          N  S  ++ N   +A   F  + HM P P I  F  L
Sbjct: 3   FSSPGSGACMLSPPLPFFSSSQNNFHSKSLHFNTLDDALSSFNRLLHMHPPPSIVDFAKL 62

Query: 82  FGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCF-------------------GN 122
             ++AK +HY  V+S   ++ S G+ P+  TLNILIN F                   G+
Sbjct: 63  LTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSVLAKILKLGH 122

Query: 123 KE---------RGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALR 173
           +          RGLCVE +I EA  LF  MI  G +P+V+TYGTLING C+ GN S A+R
Sbjct: 123 QPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIR 182

Query: 174 LHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTT 233
           L + M  G+       + ++  Y+ IIDSLCK+  V +A  LF +M G+GI+P +   T+
Sbjct: 183 LLRSMEQGN------CQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTS 236

Query: 234 LIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRG 293
           L+H  C    W+ V  L  +M++    P+++ F+ ++D LCK GK+ EA+ ++++MIQRG
Sbjct: 237 LVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRG 296

Query: 294 LNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAM 353
           + PD  TY +LMDG+CL   +D A ++F  M  KG    V+SY  LINGYCKI  +++AM
Sbjct: 297 VEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAM 356

Query: 354 SLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGL 413
            L+ ++          TYNTL+ GL   G+   A  LF EM      PDL TY+IL+D L
Sbjct: 357 YLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSL 416

Query: 414 CKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTV 473
           CKN  ++EA+ L   +E +     I+++N +IDG+C+AG L+ A +LF  L  KGL P+V
Sbjct: 417 CKNCHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSV 476

Query: 474 VTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHK 533
            TY+IMIHGLC++G L +AN   + M+ N C+P+  T+NT+  GFLQNN+T + ++LL +
Sbjct: 477 WTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEE 536

Query: 534 MAEPERNLVPDDTTFSIVVDLLAKD 558
           M    R    D +T +++V++L+ D
Sbjct: 537 ML--ARGFSADVSTTTLLVEMLSDD 559



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 113/379 (29%), Positives = 187/379 (49%), Gaps = 2/379 (0%)

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
           +I  ++ ++ S+ K         L  +M   G+ P V     LI+ FC          + 
Sbjct: 55  SIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSVL 114

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
            ++L LG +P+  TF  +I  LC  GKI EA  L + MI  G  P+  TY +L++G C V
Sbjct: 115 AKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKV 174

Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
           G    A  +  SM    C+  VV Y  +I+  CK   V EA +L+ Q++  G+   + TY
Sbjct: 175 GNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTY 234

Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
            +L+  L    +  +   L ++M    + PD+  ++ ++D LCK   V EA ++  M+  
Sbjct: 235 TSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQ 294

Query: 432 NKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEK 491
              E  +  +  L+DG C    +D A ++F  + +KG  P V++Y+ +I+G C+  K++K
Sbjct: 295 RGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDK 354

Query: 492 ANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIV 551
           A      M +    P+  T+NTLMHG     +    + L H+M    R  +PD  T+SI+
Sbjct: 355 AMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIALFHEMV--ARGQMPDLVTYSIL 412

Query: 552 VDLLAKDEKYHECSAVSKS 570
           +D L K+    E  A+ K+
Sbjct: 413 LDSLCKNCHLEEAMALLKA 431



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 124/415 (29%), Positives = 205/415 (49%), Gaps = 25/415 (6%)

Query: 55  NLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLN 114
            + EA   F  M     SP I ++  L  A+     +  V +   ++V+  +LPD +  +
Sbjct: 211 QVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFS 270

Query: 115 ILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRL 174
            +++        LC E ++ EA  +   MI  GV PDV+TY TL++G C    +  A+++
Sbjct: 271 TVVD-------ALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKV 323

Query: 175 HKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTL 234
              MV   +        ++ SY+ +I+  CK   +DKA  LF EM  +   P      TL
Sbjct: 324 FDMMVRKGF------APDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTL 377

Query: 235 IHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGL 294
           +HG C  G  ++   LF EM+  G  P+L+T+++++D LCK   + EA  LL+ +    L
Sbjct: 378 MHGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNCHLEEAMALLKAIEASNL 437

Query: 295 NPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMS 354
           NPD   YN ++DG C  G ++ AR++F ++ SKG   +V +YNI+I+G CK   + EA  
Sbjct: 438 NPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANK 497

Query: 355 LYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILI---- 410
           L+ ++  N       TYNT+  G  Q  +   A +L +EM       D+ST  +L+    
Sbjct: 498 LFMEMDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGFSADVSTTTLLVEMLS 557

Query: 411 -DGLCKNNC------VQEAVKLFHMLEMNKFE-FGIEIFNCLIDGLCKAGRLDNA 457
            DGL +++C      + E  + + +     F+  G E   C +  L K G +  +
Sbjct: 558 DDGLDQSSCFLMLSVLSEDDRRYFIFIPEGFDLLGWEFMRCKLKELAKIGEVSKS 612


>gi|449491568|ref|XP_004158939.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 412

 Score =  402 bits (1033), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 215/439 (48%), Positives = 280/439 (63%), Gaps = 34/439 (7%)

Query: 105 GLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCR 164
           GL PD  TLNIL NC       LC  NR+ E       ++  G  PD++TY TLI G CR
Sbjct: 5   GLSPDLFTLNILANC-------LCNLNRVSEGLAAMTGILRRGYIPDIVTYNTLIKGLCR 57

Query: 165 TGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGI 224
              +SVA                          IIID LCK G  D+AKE+F EMK +G+
Sbjct: 58  VHRISVAT------------------------CIIIDGLCKVGHEDEAKEIFEEMKAQGM 93

Query: 225 NPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANG 284
            P V+  ++L+HGFCCAG  EE   LF EM+D G +PNL+ FNV+ID LCK GK+ EA  
Sbjct: 94  IPNVISYSSLVHGFCCAGKLEESKRLFNEMVDQGVQPNLVQFNVLIDILCKEGKVIEAKK 153

Query: 285 LLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYC 344
           LLE+ IQRG+  D  TYNSL+DG+C +G + +AR++FLSM SKGC+H  +SY ILINGYC
Sbjct: 154 LLEVTIQRGIILDLVTYNSLIDGFCKIGDLSSARKLFLSMPSKGCEHNEISYTILINGYC 213

Query: 345 KILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLS 404
           KI  VEEAM+LY ++   G R  V TY+TLL+GL Q G+ G A KLF  MK   +  D  
Sbjct: 214 KIWKVEEAMNLYNEMPQVGKRPNVKTYSTLLTGLLQTGKVGDANKLFGVMKASGISVDSC 273

Query: 405 TYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKL 464
            Y I +DGLCKN  + EA++LF+ L+   F+   E ++ LIDGLCKAG+++ AWE F +L
Sbjct: 274 IYVIFLDGLCKNGVLFEAMELFNELKSYNFKLDFESYSRLIDGLCKAGKVEIAWEFFKQL 333

Query: 465 PQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEK---NGCAPNVVTFNTLMHGFLQN 521
            Q+GL P VVT +IMIHG CR  +++KAN     MEK   NGC P+++T+NTL+ GF ++
Sbjct: 334 SQEGLQPNVVTCNIMIHGFCRVEQVDKANILFEKMEKMEENGCTPDIITYNTLLRGFCES 393

Query: 522 NKTSKVVELLHKMAEPERN 540
           NK  +VV LLHKM +  R+
Sbjct: 394 NKLEEVVNLLHKMFKRMRH 412



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 123/409 (30%), Positives = 205/409 (50%), Gaps = 19/409 (4%)

Query: 72  SPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKER------ 125
           SP + + N+L   +         ++    ++  G +PD +T N LI       R      
Sbjct: 7   SPDLFTLNILANCLCNLNRVSEGLAAMTGILRRGYIPDIVTYNTLIKGLCRVHRISVATC 66

Query: 126 ----GLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSG 181
               GLC      EA  +F+ M A G+ P+VI+Y +L++GFC  G L  + RL  +MV  
Sbjct: 67  IIIDGLCKVGHEDEAKEIFEEMKAQGMIPNVISYSSLVHGFCCAGKLEESKRLFNEMV-- 124

Query: 182 DYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCA 241
             + G+  + N+  ++++ID LCKEG V +AK+L      RGI   +V   +LI GFC  
Sbjct: 125 --DQGV--QPNLVQFNVLIDILCKEGKVIEAKKLLEVTIQRGIILDLVTYNSLIDGFCKI 180

Query: 242 GNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTY 301
           G+      LF+ M   G   N +++ ++I+  CK  K+ EA  L   M Q G  P+  TY
Sbjct: 181 GDLSSARKLFLSMPSKGCEHNEISYTILINGYCKIWKVEEAMNLYNEMPQVGKRPNVKTY 240

Query: 302 NSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIIS 361
           ++L+ G    G++  A ++F  M + G       Y I ++G CK   + EAM L+ ++ S
Sbjct: 241 STLLTGLLQTGKVGDANKLFGVMKASGISVDSCIYVIFLDGLCKNGVLFEAMELFNELKS 300

Query: 362 NGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQE 421
              +    +Y+ L+ GL +AG+   A + F ++    ++P++ T NI+I G C+   V +
Sbjct: 301 YNFKLDFESYSRLIDGLCKAGKVEIAWEFFKQLSQEGLQPNVVTCNIMIHGFCRVEQVDK 360

Query: 422 AVKLFHMLEM---NKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQK 467
           A  LF  +E    N     I  +N L+ G C++ +L+    L HK+ ++
Sbjct: 361 ANILFEKMEKMEENGCTPDIITYNTLLRGFCESNKLEEVVNLLHKMFKR 409



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 76/278 (27%), Positives = 136/278 (48%), Gaps = 25/278 (8%)

Query: 324 MHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTL--------- 374
           MH  G    + + NIL N  C +  V E ++    I+  G    ++TYNTL         
Sbjct: 1   MHLAGLSPDLFTLNILANCLCNLNRVSEGLAAMTGILRRGYIPDIVTYNTLIKGLCRVHR 60

Query: 375 --------LSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLF 426
                   + GL + G    A+++F+EMK   + P++ +Y+ L+ G C    ++E+ +LF
Sbjct: 61  ISVATCIIIDGLCKVGHEDEAKEIFEEMKAQGMIPNVISYSSLVHGFCCAGKLEESKRLF 120

Query: 427 HMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRK 486
           + +     +  +  FN LID LCK G++  A +L     Q+G++  +VTY+ +I G C+ 
Sbjct: 121 NEMVDQGVQPNLVQFNVLIDILCKEGKVIEAKKLLEVTIQRGIILDLVTYNSLIDGFCKI 180

Query: 487 GKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDT 546
           G L  A    L M   GC  N +++  L++G+ +  K  + + L ++M  P+    P+  
Sbjct: 181 GDLSSARKLFLSMPSKGCEHNEISYTILINGYCKIWKVEEAMNLYNEM--PQVGKRPNVK 238

Query: 547 TFSIVVDLLAKDEKYHECSAV------SKSSYRACLYV 578
           T+S ++  L +  K  + + +      S  S  +C+YV
Sbjct: 239 TYSTLLTGLLQTGKVGDANKLFGVMKASGISVDSCIYV 276



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 42/138 (30%), Positives = 64/138 (46%), Gaps = 12/138 (8%)

Query: 44  FLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVS 103
           FL   CK+G+  L EA   F  +          S++ L   + K    +    F+++L  
Sbjct: 278 FLDGLCKNGV--LFEAMELFNELKSYNFKLDFESYSRLIDGLCKAGKVEIAWEFFKQLSQ 335

Query: 104 IGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAF---GVRPDVITYGTLIN 160
            GL P+ +T NI+I+       G C   ++ +A  LF+ M      G  PD+ITY TL+ 
Sbjct: 336 EGLQPNVVTCNIMIH-------GFCRVEQVDKANILFEKMEKMEENGCTPDIITYNTLLR 388

Query: 161 GFCRTGNLSVALRLHKKM 178
           GFC +  L   + L  KM
Sbjct: 389 GFCESNKLEEVVNLLHKM 406


>gi|147810269|emb|CAN75824.1| hypothetical protein VITISV_004157 [Vitis vinifera]
          Length = 1512

 Score =  402 bits (1033), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 223/614 (36%), Positives = 336/614 (54%), Gaps = 81/614 (13%)

Query: 21   LSSLFKSPRQIAAVSSPETQL---------NEFLHENCKSGIINLNEARYFFGYMTHMQP 71
            LSSLFK+P Q +  +S   ++           ++ + C+ GII LN+A   F      +P
Sbjct: 883  LSSLFKNPPQRSGSNSKSEKIGTKASLSPFERYVRDQCRFGIIKLNDAIKLFDRSLCSEP 942

Query: 72   SPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINC------------ 119
             P   +FN L  +VAK  +Y  V   YRK+  +G+ PD  TLNILI+C            
Sbjct: 943  MPCTDTFNHLLASVAKLGYYSTVFPMYRKINDVGIQPDLYTLNILIHCCCSLRAVGCGFG 1002

Query: 120  ----------------FGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFC 163
                                 +G+ +EN I +A  LF  M   G+  D  TYG LING C
Sbjct: 1003 VFGGFLKRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTKKGLLGDAKTYGILINGLC 1062

Query: 164  RTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRG 223
            +     +A++LH+KM           K ++F+Y +IID+LCK+G+  +A ++F EM G G
Sbjct: 1063 KARKTGLAIKLHEKMKGN-------CKGDVFTYGMIIDALCKDGMTTEALDMFSEMIGAG 1115

Query: 224  INPAVVVCTTL-----------------------------------IHGFCCAGNWEEVN 248
            I P VVV ++L                                   IHG   AG W+EV 
Sbjct: 1116 ILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVT 1175

Query: 249  GLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGY 308
                 M+D G  P+  TF ++ID LCK GK+ EA  +LELM  +G  PD  TYN+LM+G 
Sbjct: 1176 WFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMRHKGKEPDILTYNTLMNGL 1235

Query: 309  CLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTV 368
            CLVG+++ A ++F S+  +G K  V SYNILINGYCK   ++EA   + ++   G++ + 
Sbjct: 1236 CLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPST 1295

Query: 369  ITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHM 428
            +TYNTL+  L Q+G+   AQKLF EM+       LSTY +L+DGLCKN  ++EA+ LF  
Sbjct: 1296 VTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQS 1355

Query: 429  LEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGK 488
            ++  + +  IE+F+ L+DG+C+AG+L+ AW+ F ++ + GL P  + Y+I+I+GLC KG 
Sbjct: 1356 IKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGM 1415

Query: 489  LEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTF 548
            L +A   L  ME+ GC P+ +TFN ++   L+ N+  + ++LL +M    RN  PD+   
Sbjct: 1416 LSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMR--NRNFSPDEAVT 1473

Query: 549  SIVVDLLAKDEKYH 562
            S+++ L + D ++H
Sbjct: 1474 SMLLCLASFDPQWH 1487



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 94/317 (29%), Positives = 157/317 (49%), Gaps = 13/317 (4%)

Query: 257  LGPRPNLLTFNVMIDCLCKGG--KINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRI 314
            +G + +L  F   +   C+ G  K+N+A  L +  +     P   T+N L+     +G  
Sbjct: 903  IGTKASLSPFERYVRDQCRFGIIKLNDAIKLFDRSLCSEPMPCTDTFNHLLASVAKLGYY 962

Query: 315  DTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTL 374
             T   ++  ++  G +  + + NILI+  C +  V     ++   +  G     +T  TL
Sbjct: 963  STVFPMYRKINDVGIQPDLYTLNILIHCCCSLRAVGCGFGVFGGFLKRGFEPDAVTVTTL 1022

Query: 375  LSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMN-- 432
            + G++       A +LFDEM    +  D  TY ILI+GLCK      A+KL   ++ N  
Sbjct: 1023 VKGVWMENGIPDAVQLFDEMTKKGLLGDAKTYGILINGLCKARKTGLAIKLHEKMKGNCK 1082

Query: 433  --KFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLE 490
               F +G+     +ID LCK G    A ++F ++   G++P VV YS ++ GLCR G+L+
Sbjct: 1083 GDVFTYGM-----IIDALCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLK 1137

Query: 491  KANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSI 550
            +A +F   ME  G + +V T+N+L+HG  +     +V   L+ M +  R   PD  TF+I
Sbjct: 1138 EALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVD--RGFSPDAFTFTI 1195

Query: 551  VVDLLAKDEKYHECSAV 567
            ++D L K+ K  E   +
Sbjct: 1196 LIDGLCKEGKVGEAQQI 1212


>gi|359488050|ref|XP_002263119.2| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Vitis vinifera]
          Length = 686

 Score =  398 bits (1023), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 214/531 (40%), Positives = 310/531 (58%), Gaps = 36/531 (6%)

Query: 56  LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNI 115
           L++A   F  M HM P P    F  L  ++AK +HY  V+S   ++ S G+ PD  TLNI
Sbjct: 131 LDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNI 190

Query: 116 LINCFGNKER----------------------------GLCVENRIKEATWLFKNMIAFG 147
           LIN F +  R                            GLCVE +I EA  LF   I  G
Sbjct: 191 LINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEG 250

Query: 148 VRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEG 207
            +PDV+TYGTL+NG C+ GN S A+RL + MV  +       + N+ +Y+ IIDSLCK+ 
Sbjct: 251 FQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKN------CRPNVIAYNTIIDSLCKDR 304

Query: 208 LVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFN 267
            V +A  LF EM  +GI+P +    +LIH  C    W+ V  L  EM++    PN++ F+
Sbjct: 305 QVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFS 364

Query: 268 VMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSK 327
            ++D LCK G I  A+ ++++MI+RG+ PD  TY +LMDG+CL   +D A ++F +M  K
Sbjct: 365 TVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHK 424

Query: 328 GCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYA 387
           GC   V SYNILINGYC+I  +++AM L  Q+   G+    +TYNTL+ GL   G+  +A
Sbjct: 425 GCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHA 484

Query: 388 QKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDG 447
             LF EM      PDL TY IL+D LCKN+ + EA+ L   +E +  +  I ++N  IDG
Sbjct: 485 IALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDG 544

Query: 448 LCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPN 507
           +C+AG L+ A +LF  L  KGL P V TY+IMIHGLC++G L++AN     M++NGC+ +
Sbjct: 545 MCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKMDENGCSRD 604

Query: 508 VVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKD 558
              +NT++ GFL++N+T    +LL +M         D +T +++V++L+ D
Sbjct: 605 GCIYNTIIRGFLRSNETFGATQLLQEML--AEGFSADVSTTTLIVEMLSDD 653



 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 119/399 (29%), Positives = 193/399 (48%), Gaps = 15/399 (3%)

Query: 172 LRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVC 231
           L +H    + D+   L S   +  YS ++              L  +M   GI P V   
Sbjct: 142 LHMHPPPSTVDFTKLLTSIAKMKHYSTVL-------------SLSTQMDSFGIPPDVYTL 188

Query: 232 TTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQ 291
             LI+ FC          +  ++L LG +P+  TFN +I  LC  GKI EA  L +  I 
Sbjct: 189 NILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIG 248

Query: 292 RGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEE 351
            G  PD  TY +LM+G C VG    A  +  SM  K C+  V++YN +I+  CK   V E
Sbjct: 249 EGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTE 308

Query: 352 AMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILID 411
           A +L+ ++I+ G+   + TYN+L+  L    +  +   L +EM    + P++  ++ ++D
Sbjct: 309 AFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVD 368

Query: 412 GLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVP 471
            LCK   +  A  +  M+     E  +  +  L+DG C    +D A ++F  +  KG VP
Sbjct: 369 ALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVP 428

Query: 472 TVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELL 531
            V +Y+I+I+G C+  +++KA   L  M   G   + VT+NTL+HG     +    + L 
Sbjct: 429 NVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALF 488

Query: 532 HKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKS 570
           H+M    +  +PD  T+ I++D L K+    E   + K+
Sbjct: 489 HEMVASGQ--IPDLVTYRILLDYLCKNHHLAEAMVLLKA 525



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 118/409 (28%), Positives = 201/409 (49%), Gaps = 26/409 (6%)

Query: 30  QIAAVSSPETQLNEFLHENCKSGIINLN-------------EARYFFGYMTHMQPSPPIS 76
           ++   S+    L   + +NC+  +I  N             EA   F  M     SP I 
Sbjct: 267 KVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIF 326

Query: 77  SFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEA 136
           ++N L  A+     +  V +   ++V+  ++P+ +  + +++        LC E  I  A
Sbjct: 327 TYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVD-------ALCKEGMIAIA 379

Query: 137 TWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSY 196
             +   MI  GV PDV+TY  L++G C    +  A+++   MV      G +   N+ SY
Sbjct: 380 HDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMV----HKGCVP--NVRSY 433

Query: 197 SIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLD 256
           +I+I+  C+   +DKA  L  +M  +G+    V   TLIHG C  G  +    LF EM+ 
Sbjct: 434 NILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVA 493

Query: 257 LGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDT 316
            G  P+L+T+ +++D LCK   + EA  LL+ +    L+ D   YN  +DG C  G ++ 
Sbjct: 494 SGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEA 553

Query: 317 AREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLS 376
           AR++F ++ SKG +  V +YNI+I+G CK   ++EA  L+R++  NG  +    YNT++ 
Sbjct: 554 ARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKMDENGCSRDGCIYNTIIR 613

Query: 377 GLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKL 425
           G  ++ +   A +L  EM       D+ST  ++++ L  +   Q   +L
Sbjct: 614 GFLRSNETFGATQLLQEMLAEGFSADVSTTTLIVEMLSDDGLDQSFERL 662


>gi|359488009|ref|XP_003633686.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 579

 Score =  397 bits (1020), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 218/542 (40%), Positives = 316/542 (58%), Gaps = 42/542 (7%)

Query: 45  LHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSI 104
           LH N   G I+       F  M  MQP P    FN L  ++AK +H+  ++S   ++ S 
Sbjct: 37  LHFNTIDGAIS------SFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSF 90

Query: 105 GLLPDFLTLNILINCF-------------------GNKE---------RGLCVENRIKEA 136
           G+ P+  TL+ILIN F                   G++          RG+ VE +I EA
Sbjct: 91  GIPPNIYTLHILINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGIYVEGKIGEA 150

Query: 137 TWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSY 196
             LF  MI  G RPDV+TYGTLING C+ GN S A+RL   MV  +       + N+F+Y
Sbjct: 151 LHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKN------CQPNVFAY 204

Query: 197 SIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLD 256
           + IIDSLCK+  V +A  LF EM  +GI+P +    +LIH  C    W+ V  L  EM+D
Sbjct: 205 NTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVD 264

Query: 257 LGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDT 316
               P++++FN ++D LCK GK+ EA+ +++ MIQRG+ P+  TY +LMDG+CL+  +D 
Sbjct: 265 SKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDE 324

Query: 317 AREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLS 376
           A ++F +M  KGC   V+SYN LINGYCKI  +++AM L+ ++    +    +TY+TL+ 
Sbjct: 325 AVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIH 384

Query: 377 GLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEF 436
           GL    +   A  LF EM   +  P+L TY IL+D LCKN  + EA+ L   +E +  + 
Sbjct: 385 GLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDP 444

Query: 437 GIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFL 496
            I++ N  IDG+C+AG L+ A +LF  L  KGL P V TYSIMI+GLCR+G L++A+   
Sbjct: 445 DIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLF 504

Query: 497 LYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLA 556
             M++NGC  N   +NT+  GFL+NN+TS+ ++LL +M    R    D +T ++ V +L+
Sbjct: 505 REMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMV--ARGFSADASTMTLFVKMLS 562

Query: 557 KD 558
            D
Sbjct: 563 DD 564



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 115/408 (28%), Positives = 197/408 (48%), Gaps = 12/408 (2%)

Query: 173 RLHKKMVSGDYENGLISKTN----------IFSYSIIIDSLCKEGLVDKAKELFLEMKGR 222
           R H K +  +  +G IS  N             ++ ++ S+ K         L  +M   
Sbjct: 31  RFHSKSLHFNTIDGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSF 90

Query: 223 GINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEA 282
           GI P +     LI+ FC          +  ++L LG +P+  TF  +I  +   GKI EA
Sbjct: 91  GIPPNIYTLHILINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGIYVEGKIGEA 150

Query: 283 NGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILING 342
             L + MI  G  PD  TY +L++G C VG    A  +  SM  K C+  V +YN +I+ 
Sbjct: 151 LHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDS 210

Query: 343 YCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPD 402
            CK   V EA +L+ ++++ G+   + TYN+L+  L    +  +   L +EM    + PD
Sbjct: 211 LCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPD 270

Query: 403 LSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFH 462
           + ++N ++D LCK   V EA  +   +     E  +  +  L+DG C    +D A ++F 
Sbjct: 271 VVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFD 330

Query: 463 KLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNN 522
            +  KG +P V++Y+ +I+G C+  +++KA      M +    P+ VT++TL+HG     
Sbjct: 331 TMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVE 390

Query: 523 KTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKS 570
           +    + L H+M    +  +P+  T+ I++D L K+    E  A+ K+
Sbjct: 391 RLQDAIALFHEMVACSQ--IPNLVTYRILLDYLCKNRYLAEAMALLKA 436


>gi|147788022|emb|CAN69338.1| hypothetical protein VITISV_032632 [Vitis vinifera]
          Length = 585

 Score =  395 bits (1016), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 209/532 (39%), Positives = 313/532 (58%), Gaps = 36/532 (6%)

Query: 56  LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNI 115
           L++A   F  M HM P P    FN L  ++AK + Y  V S   ++ S G+ PD  TLNI
Sbjct: 48  LDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNI 107

Query: 116 LIN--CFGNKE--------------------------RGLCVENRIKEATWLFKNMIAFG 147
           LIN  C  N+                           RGLCVE +I +A  LF  MI  G
Sbjct: 108 LINSFCHLNRPGFAFSVLAKILKLGLQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEG 167

Query: 148 VRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEG 207
            +P+V+TYGTLING C+ GN + A+RL + M  G+       + ++  Y+ IIDSLCK+ 
Sbjct: 168 FQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGN------CQPDVVVYTSIIDSLCKDR 221

Query: 208 LVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFN 267
            V +A  LF +M G+GI+P +   T+LIH  C    W+ V  L  +M++    P+++ F+
Sbjct: 222 QVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFS 281

Query: 268 VMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSK 327
            ++D LCK GKI EA+ ++++MI RG+ P+  TYN+LMDG+CL   +D A ++F +M   
Sbjct: 282 TVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHN 341

Query: 328 GCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYA 387
           G    V+SYN LINGYCKI  +++A  L+ ++    +    +TYNTL+ GL   G+   A
Sbjct: 342 GYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHGLCHVGRLQDA 401

Query: 388 QKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDG 447
             LF EM  +   PDL+TY IL+D LCK + + EA+ L   +E +  +  I+I+  +IDG
Sbjct: 402 IALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDG 461

Query: 448 LCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPN 507
           +C+AG L+ A ++F  L  KGL P V TY+IMI+GLCR+G L++AN   + M+ NGC+P+
Sbjct: 462 MCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPD 521

Query: 508 VVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDE 559
             T+NT+  G LQN +  + ++LL +M    R    D +T +++V++L  D+
Sbjct: 522 GCTYNTITQGLLQNKEALRAIQLLQEML--ARGFSADVSTTTLLVEMLCDDK 571



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 124/406 (30%), Positives = 193/406 (47%), Gaps = 36/406 (8%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CK G  N N A      M      P +  +  +  ++ K+R      + + K+V  G+ P
Sbjct: 183 CKVG--NTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISP 240

Query: 109 DFLT--------------------LNILINC--------FGNKERGLCVENRIKEATWLF 140
           D  T                    LN +IN         F      LC E +I EA  + 
Sbjct: 241 DIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVV 300

Query: 141 KNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIII 200
             MI  GV P+V+TY  L++G C    +  A+++   MV   Y        N+ SY+ +I
Sbjct: 301 DMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGY------APNVISYNTLI 354

Query: 201 DSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPR 260
           +  CK   +DKA  LF EM  + + P  V   TL+HG C  G  ++   LF EM+  G  
Sbjct: 355 NGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHGLCHVGRLQDAIALFHEMVAHGQI 414

Query: 261 PNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREI 320
           P+L T+ +++D LCK   ++EA  LL+ +    ++PD   Y  ++DG C  G ++ AR+I
Sbjct: 415 PDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDI 474

Query: 321 FLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQ 380
           F ++ SKG +  V +Y I+ING C+   ++EA  L+ ++  NG      TYNT+  GL Q
Sbjct: 475 FSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQ 534

Query: 381 AGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLF 426
             +A  A +L  EM       D+ST  +L++ LC +   Q   ++ 
Sbjct: 535 NKEALRAIQLLQEMLARGFSADVSTTTLLVEMLCDDKLDQSVKQIL 580



 Score =  108 bits (270), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 71/254 (27%), Positives = 118/254 (46%), Gaps = 2/254 (0%)

Query: 314 IDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNT 373
           +D A   F  M       + V +N L+    K        SL  Q+ S G+   V T N 
Sbjct: 48  LDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNI 107

Query: 374 LLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNK 433
           L++      + G+A  +  ++    ++PD +T+  LI GLC    + +A+ LF  +    
Sbjct: 108 LINSFCHLNRPGFAFSVLAKILKLGLQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEG 167

Query: 434 FEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKAN 493
           F+  +  +  LI+GLCK G  + A  L   + Q    P VV Y+ +I  LC+  ++ +A 
Sbjct: 168 FQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAF 227

Query: 494 DFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
           +    M   G +P++ T+ +L+H      +   V  LL++M   +  ++PD   FS VVD
Sbjct: 228 NLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSK--IMPDVVIFSTVVD 285

Query: 554 LLAKDEKYHECSAV 567
            L K+ K  E   V
Sbjct: 286 ALCKEGKITEAHDV 299


>gi|147771990|emb|CAN69053.1| hypothetical protein VITISV_022963 [Vitis vinifera]
          Length = 2021

 Score =  395 bits (1016), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 216/541 (39%), Positives = 313/541 (57%), Gaps = 37/541 (6%)

Query: 25  FKSPRQIAAVSSPETQLNEFLHENCKSGIINLN---EARYFFGYMTHMQPSPPISSFNLL 81
           F SP   A + SP          N  S  ++ N   +A   F  + HM P P I  F  L
Sbjct: 12  FSSPGSGACMLSPPLPFFSSSQNNFHSKSLHFNTLDDALSSFNRLLHMHPPPSIVDFAKL 71

Query: 82  FGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCF-------------------GN 122
             ++AK +HY  V+S   ++ S G+ P+  TLNILIN F                   G+
Sbjct: 72  LTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSVLAKILKLGH 131

Query: 123 KE---------RGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALR 173
           +          RGLCVE +I EA  LF  MI  G +P+V+TYGTLING C+ GN S A+R
Sbjct: 132 QPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIR 191

Query: 174 LHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTT 233
           L + M  G+       + ++  Y+ IIDSLCK+  V +A  LF +M G+GI+P +   T+
Sbjct: 192 LLRSMEQGN------CQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTS 245

Query: 234 LIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRG 293
           L+H  C    W+ V  L  +M++    P+++ F+ ++D LCK GK+ EA+ ++++MIQRG
Sbjct: 246 LVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRG 305

Query: 294 LNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAM 353
           + PD  TY +LMDG+CL   +D A ++F  M  KG    V+SY  LINGYCKI  +++AM
Sbjct: 306 VEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAM 365

Query: 354 SLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGL 413
            L+ ++          TYNTL+ GL   G+   A  LF EM      PDL TY+IL+D L
Sbjct: 366 YLFEEMCRKEWIPDTKTYNTLMYGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSL 425

Query: 414 CKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTV 473
           CKN  ++EA+ L   +E +     I+++N +IDG+C+AG L+ A +LF  L  KGL P+V
Sbjct: 426 CKNRHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSV 485

Query: 474 VTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHK 533
            TY+IMIHGLC++G L +AN   + M+ N C+P+  T+NT+  GFLQNN+T + ++LL +
Sbjct: 486 WTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEE 545

Query: 534 M 534
           M
Sbjct: 546 M 546



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 112/379 (29%), Positives = 187/379 (49%), Gaps = 2/379 (0%)

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
           +I  ++ ++ S+ K         L  +M   G+ P V     LI+ FC          + 
Sbjct: 64  SIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSVL 123

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
            ++L LG +P+  TF  +I  LC  GKI EA  L + MI  G  P+  TY +L++G C V
Sbjct: 124 AKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKV 183

Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
           G    A  +  SM    C+  VV Y  +I+  CK   V EA +L+ Q++  G+   + TY
Sbjct: 184 GNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTY 243

Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
            +L+  L    +  +   L ++M    + PD+  ++ ++D LCK   V EA ++  M+  
Sbjct: 244 TSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQ 303

Query: 432 NKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEK 491
              E  +  +  L+DG C    +D A ++F  + +KG  P V++Y+ +I+G C+  K++K
Sbjct: 304 RGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDK 363

Query: 492 ANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIV 551
           A      M +    P+  T+NTLM+G     +    + L H+M    R  +PD  T+SI+
Sbjct: 364 AMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRLQDAIALFHEMV--ARGQMPDLVTYSIL 421

Query: 552 VDLLAKDEKYHECSAVSKS 570
           +D L K+    E  A+ K+
Sbjct: 422 LDSLCKNRHLEEAMALLKA 440



 Score =  111 bits (278), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 70/243 (28%), Positives = 117/243 (48%), Gaps = 13/243 (5%)

Query: 55  NLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLN 114
            ++EA   F  M     +P + S+  L     K    D  +  + ++     +PD  T N
Sbjct: 325 EMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYN 384

Query: 115 ILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRL 174
            L+        GLC   R+++A  LF  M+A G  PD++TY  L++  C+  +L  A+ L
Sbjct: 385 TLMY-------GLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNRHLEEAMAL 437

Query: 175 HKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTL 234
            K + + +         +I  Y+IIID +C+ G ++ A++LF  +  +G++P+V     +
Sbjct: 438 LKAIEASNL------NPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIM 491

Query: 235 IHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGL 294
           IHG C  G   E N LF+EM      P+  T+N +     +  +   A  LLE M+ RG 
Sbjct: 492 IHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGF 551

Query: 295 NPD 297
           + D
Sbjct: 552 SAD 554


>gi|359485438|ref|XP_003633275.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 572

 Score =  394 bits (1013), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 210/532 (39%), Positives = 311/532 (58%), Gaps = 36/532 (6%)

Query: 55  NLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLN 114
            +++A   F  M  M+P P I  F+ L  ++ + +HY  V+S Y+++ S G+  +  TLN
Sbjct: 34  TIDDALSLFNRMLRMRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLN 93

Query: 115 ILINCFGNKER----------------------------GLCVENRIKEATWLFKNMIAF 146
           ILIN F +  R                            GLCVE +I EA  LF  M   
Sbjct: 94  ILINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGE 153

Query: 147 GVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKE 206
           G +PDV+TYGTLING C+ GN S A+R  + M   +       +  +  YS IIDSLCK+
Sbjct: 154 GFQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRN------CRPTVVVYSTIIDSLCKD 207

Query: 207 GLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTF 266
             + +A  LF +M  +GI+P     ++LIHG C  G+W+E   LF  M+     P+ LTF
Sbjct: 208 RQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTF 267

Query: 267 NVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHS 326
           N ++D LCK G + +A+ ++++MIQ  L PD  TYNSLMDG+CL   +     +F +M  
Sbjct: 268 NTLVDALCKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVR 327

Query: 327 KGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGY 386
           KGC  +V+SY  LINGYCKI  +++AM L+ ++   G+    +TYNTL+ GL   G+   
Sbjct: 328 KGCVPSVISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRD 387

Query: 387 AQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLID 446
           A  LF EM +Y   PDL TY IL D LCKN+ + EA+ L  ++E    +  I I++ ++D
Sbjct: 388 AIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMD 447

Query: 447 GLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAP 506
           G+C+AG L+ A +LF KL  KGL P V TY+IMI+GLC++G L +A+     M++NGC+P
Sbjct: 448 GMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGEMDENGCSP 507

Query: 507 NVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKD 558
           N  T+N +  GFL+NN+T + ++L  +M    R    D +T +++V++L+ D
Sbjct: 508 NACTYNLITRGFLRNNETLRAIQLFQEML--SRGFSIDVSTTTLLVEMLSDD 557



 Score =  119 bits (298), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 70/248 (28%), Positives = 120/248 (48%), Gaps = 2/248 (0%)

Query: 311 VGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVIT 370
           V  ID A  +F  M       ++V ++ L+    ++ +    +SLY+Q+ S G+     T
Sbjct: 32  VNTIDDALSLFNRMLRMRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYT 91

Query: 371 YNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLE 430
            N L++      + G+A  +  ++     +P  +T+  LI GLC    + EA++LF  + 
Sbjct: 92  LNILINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMT 151

Query: 431 MNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLE 490
              F+  +  +  LI+GLCK G    A      + Q+   PTVV YS +I  LC+  +L 
Sbjct: 152 GEGFQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQLT 211

Query: 491 KANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSI 550
           +A      M   G +PN  T+++L+HG        + + L + M    R ++PD  TF+ 
Sbjct: 212 EALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMI--HRKIMPDQLTFNT 269

Query: 551 VVDLLAKD 558
           +VD L K+
Sbjct: 270 LVDALCKE 277



 Score = 75.5 bits (184), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 45/177 (25%), Positives = 80/177 (45%), Gaps = 2/177 (1%)

Query: 387 AQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLID 446
           A  LF+ M      P +  ++ L+  + +       + L+  ++           N LI+
Sbjct: 38  ALSLFNRMLRMRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNILIN 97

Query: 447 GLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAP 506
             C   RL  A+ +   + + G  P+  T++ +I GLC +GK+ +A      M   G  P
Sbjct: 98  SFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQP 157

Query: 507 NVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
           +V+T+ TL++G  +   TS  +  L  M +  RN  P    +S ++D L KD +  E
Sbjct: 158 DVLTYGTLINGLCKVGNTSTAIRFLRSMEQ--RNCRPTVVVYSTIIDSLCKDRQLTE 212



 Score = 68.9 bits (167), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 62/237 (26%), Positives = 101/237 (42%), Gaps = 18/237 (7%)

Query: 20  KLSSLFKSPRQIAAVSSPET-QLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSF 78
           K   LF+   Q   +  P+T   N  +H  C  G   L +A   F  M      P + ++
Sbjct: 352 KAMGLFEEMSQQGLI--PDTVTYNTLIHGLCHVG--RLRDAIALFHEMVVYGQIPDLVTY 407

Query: 79  NLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATW 138
            +LF  + KN      +   + +    L PD    +I+++       G+C    ++ A  
Sbjct: 408 RILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMD-------GMCRAGELEAARD 460

Query: 139 LFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSI 198
           LF  + + G+ PDV TY  +ING C+ G L+ A +L  +M     ENG     N  +Y++
Sbjct: 461 LFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGEM----DENG--CSPNACTYNL 514

Query: 199 IIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEML 255
           I     +     +A +LF EM  RG +  V   T L+      G  + V  +  E +
Sbjct: 515 ITRGFLRNNETLRAIQLFQEMLSRGFSIDVSTTTLLVEMLSDDGLDQSVKQILCEFV 571


>gi|359488005|ref|XP_002263693.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 586

 Score =  387 bits (995), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 207/532 (38%), Positives = 312/532 (58%), Gaps = 37/532 (6%)

Query: 56  LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNI 115
           L++A   F  M HM P P    FN L  ++AK + Y  V S   ++ S G+ PD  TLNI
Sbjct: 50  LDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNI 109

Query: 116 LINCF-------------------GNKE---------RGLCVENRIKEATWLFKNMIAFG 147
           LIN F                   G++          RGLCVE +I +A  LF  MI  G
Sbjct: 110 LINSFCHLNRLGFAFSVLAKILKLGHQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEG 169

Query: 148 VRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEG 207
            +P+V+TYGTLING C+ GN + A+RL + M  G+       + ++  Y+ IIDSLCK+ 
Sbjct: 170 FQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGN------CQPDVVVYTSIIDSLCKDR 223

Query: 208 LVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFN 267
            V +A  LF +M G+GI+P +   T+LIH  C    W+ V  L  +M++    P+++ F+
Sbjct: 224 QVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFS 283

Query: 268 VMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSK 327
            ++D LCK GKI EA+ ++++MI RG+ P+  TYN+LMDG+CL   +D A ++F +M   
Sbjct: 284 TVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHN 343

Query: 328 GCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYA 387
           G    V+SYN LINGYCKI  +++A  L+ ++    +    +TYNTL+      G+   A
Sbjct: 344 GYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHXC-HVGRLQDA 402

Query: 388 QKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDG 447
             LF EM  +   PDL+TY IL+D LCK + + EA+ L   +E +  +  I+I+  +IDG
Sbjct: 403 IALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDG 462

Query: 448 LCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPN 507
           +C+AG L+ A ++F  L  KGL P V TY+IMI+GLCR+G L++AN   + M+ NGC+P+
Sbjct: 463 MCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPD 522

Query: 508 VVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDE 559
             T+NT+  G LQN +  + ++LL +M    R    D +T +++V++L  D+
Sbjct: 523 GCTYNTITQGLLQNKEALRAIQLLQEML--ARGFSADVSTTTLLVEMLCDDK 572



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 117/423 (27%), Positives = 205/423 (48%), Gaps = 9/423 (2%)

Query: 131 NRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISK 190
           N + +A   F  M+     P  + +  L+    +T        L  +M      +     
Sbjct: 48  NTLDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQM------DSFGIP 101

Query: 191 TNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGL 250
            ++++ +I+I+S C    +  A  +  ++   G  P     TTLI G C  G   +   L
Sbjct: 102 PDVYTLNILINSFCHLNRLGFAFSVLAKILKLGHQPDTATFTTLIRGLCVEGKIGDALHL 161

Query: 251 FIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCL 310
           F +M+  G +PN++T+  +I+ LCK G  N A  LL  M Q    PD   Y S++D  C 
Sbjct: 162 FDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCK 221

Query: 311 VGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVIT 370
             ++  A  +F  M  +G    + +Y  LI+  C +   +   +L  Q+I++ +   V+ 
Sbjct: 222 DRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVI 281

Query: 371 YNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLE 430
           ++T++  L + G+   A  + D M +  VEP++ TYN L+DG C  + + EAVK+F  + 
Sbjct: 282 FSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMV 341

Query: 431 MNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLE 490
            N +   +  +N LI+G CK  R+D A  LF ++ QK L+P  VTY+ ++H  C  G+L+
Sbjct: 342 HNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMH-XCHVGRLQ 400

Query: 491 KANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSI 550
            A      M  +G  P++ T+  L+    + +   + + LL  +     N+ PD   ++I
Sbjct: 401 DAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIE--GSNMDPDIQIYTI 458

Query: 551 VVD 553
           V+D
Sbjct: 459 VID 461



 Score =  189 bits (479), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 123/406 (30%), Positives = 192/406 (47%), Gaps = 37/406 (9%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CK G  N N A      M      P +  +  +  ++ K+R      + + K+V  G+ P
Sbjct: 185 CKVG--NTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISP 242

Query: 109 DFLT--------------------LNILINC--------FGNKERGLCVENRIKEATWLF 140
           D  T                    LN +IN         F      LC E +I EA  + 
Sbjct: 243 DIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVV 302

Query: 141 KNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIII 200
             MI  GV P+V+TY  L++G C    +  A+++   MV   Y        N+ SY+ +I
Sbjct: 303 DMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGY------APNVISYNTLI 356

Query: 201 DSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPR 260
           +  CK   +DKA  LF EM  + + P  V   TL+H  C  G  ++   LF EM+  G  
Sbjct: 357 NGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMH-XCHVGRLQDAIALFHEMVAHGQI 415

Query: 261 PNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREI 320
           P+L T+ +++D LCK   ++EA  LL+ +    ++PD   Y  ++DG C  G ++ AR+I
Sbjct: 416 PDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDI 475

Query: 321 FLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQ 380
           F ++ SKG +  V +Y I+ING C+   ++EA  L+ ++  NG      TYNT+  GL Q
Sbjct: 476 FSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQ 535

Query: 381 AGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLF 426
             +A  A +L  EM       D+ST  +L++ LC +   Q   ++ 
Sbjct: 536 NKEALRAIQLLQEMLARGFSADVSTTTLLVEMLCDDKLDQSVKQIL 581



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 108/357 (30%), Positives = 177/357 (49%), Gaps = 11/357 (3%)

Query: 218 EMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGG 277
           +M   GI P V     LI+ FC          +  ++L LG +P+  TF  +I  LC  G
Sbjct: 94  QMDSFGIPPDVYTLNILINSFCHLNRLGFAFSVLAKILKLGHQPDTATFTTLIRGLCVEG 153

Query: 278 KINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYN 337
           KI +A  L + MI  G  P+  TY +L++G C VG  + A  +  SM    C+  VV Y 
Sbjct: 154 KIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYT 213

Query: 338 ILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLY 397
            +I+  CK   V EA +L+ +++  G+   + TY +L+  L    +  +   L ++M   
Sbjct: 214 SIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINS 273

Query: 398 NVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNA 457
            + PD+  ++ ++D LCK   + EA  +  M+ +   E  +  +N L+DG C    +D A
Sbjct: 274 KIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEA 333

Query: 458 WELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMH- 516
            ++F  +   G  P V++Y+ +I+G C+  +++KA      M +    PN VT+NTLMH 
Sbjct: 334 VKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHX 393

Query: 517 ---GFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKS 570
              G LQ+      + L H+M       +PD  T+ I++D L K     E  A+ K+
Sbjct: 394 CHVGRLQD-----AIALFHEMV--AHGQIPDLATYRILLDYLCKKSHLDEAMALLKT 443


>gi|147771991|emb|CAN69054.1| hypothetical protein VITISV_022964 [Vitis vinifera]
          Length = 586

 Score =  386 bits (992), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 207/531 (38%), Positives = 312/531 (58%), Gaps = 36/531 (6%)

Query: 56  LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNI 115
           L++A   F  M HM P P I+ F  L  ++ K +HY  V+S   ++ S G+ P+  TLNI
Sbjct: 49  LDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNI 108

Query: 116 LINCFGNKER----------------------------GLCVENRIKEATWLFKNMIAFG 147
           LIN F + +R                            GLCVE +I E   LF  MI  G
Sbjct: 109 LINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEG 168

Query: 148 VRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEG 207
            +P+V+TYGTLING C+ G+ S A+RL + M  G+       + ++  Y+ IIDSLCK+ 
Sbjct: 169 FQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGN------CQPDVVVYTSIIDSLCKDR 222

Query: 208 LVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFN 267
            V +A  LF EM  +GI+P++    +LIH  C    W+ V  L  EM++    PN++ F+
Sbjct: 223 QVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFS 282

Query: 268 VMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSK 327
            ++D LCK GK+ EA+ ++++MI+RG+ P+  TYN+LMDG+CL   +D A ++F +M  K
Sbjct: 283 TVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCK 342

Query: 328 GCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYA 387
           G    VVSY+ LINGYCKI  +E+AM L+ ++    +    +TY+TL+ GL   G+   A
Sbjct: 343 GFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDA 402

Query: 388 QKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDG 447
             LF EM      PD  +Y IL+D LCKN  + EA+ L   +E +  +  I+I+  +IDG
Sbjct: 403 IALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDG 462

Query: 448 LCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPN 507
           +C+AG L+ A +LF  L  KGL P V TY+IMI+GLC++G L +A+     M++ G +PN
Sbjct: 463 MCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPN 522

Query: 508 VVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKD 558
             T+N +  GFL+NN+T + ++LL +M    R    D +T +++V++L+ D
Sbjct: 523 GCTYNLITRGFLRNNETLRGIQLLQEML--ARGFSADVSTSTVLVEMLSDD 571



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 51/191 (26%), Positives = 86/191 (45%), Gaps = 2/191 (1%)

Query: 370 TYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHML 429
           ++NT  S          A   F+ M   +  P ++ +  L+  + K       + L H +
Sbjct: 35  SHNTFHSKSLNFNTLDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQM 94

Query: 430 EMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKL 489
           +       I   N LI+  C   RL  A+ +  K+ + G  P + T++ +I GLC +GK+
Sbjct: 95  DSFGIPPNIYTLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKI 154

Query: 490 EKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFS 549
            +       M   G  PNVVT+ TL++G  +   TS  + LL  M +   N  PD   ++
Sbjct: 155 GEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQG--NCQPDVVVYT 212

Query: 550 IVVDLLAKDEK 560
            ++D L KD +
Sbjct: 213 SIIDSLCKDRQ 223


>gi|147787958|emb|CAN73849.1| hypothetical protein VITISV_021776 [Vitis vinifera]
          Length = 671

 Score =  386 bits (991), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 229/623 (36%), Positives = 334/623 (53%), Gaps = 99/623 (15%)

Query: 45  LHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSI 104
           LH N   G I+       F  M  MQP P    FN L  ++AK +H+  ++S   ++ S 
Sbjct: 37  LHFNTIDGAIS------SFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSF 90

Query: 105 GLLPDFLTLNILINCF-------------------GNKE---------RGLCVENRIKEA 136
           G+ P+  TL+ILIN F                   G++          RG+CVE +I EA
Sbjct: 91  GIPPNIYTLHILINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGICVEGKIGEA 150

Query: 137 TWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSY 196
             LF  MI  G RPDV+TYGTLING C+ GN S A+RL   MV  +       + N+F+Y
Sbjct: 151 LHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKN------CQPNVFAY 204

Query: 197 SIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLD 256
           + IIDSLCK+  V +A  LF EM  +GI+P +    +LIH  C    W+ V  L  EM+D
Sbjct: 205 NTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVD 264

Query: 257 LGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDT 316
               P++++FN ++D LCK GK+ EA+ +++ MIQRG+ P+  TY +LMDG+CL+  +D 
Sbjct: 265 SKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDE 324

Query: 317 AREIFLSMHSKGCKHTVVSYNILINGYCKI-------------------LNVEEAMSLYR 357
           A ++F +M  KGC   V+SYN LINGYCKI                   LN++EA+ ++ 
Sbjct: 325 AVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAIHYTXLMDXXCCYLNMDEAVKVFD 384

Query: 358 QIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEM-----------------KLYNVE 400
            ++  G    VI+YNTL++G  +  +   A  LF EM                  L +VE
Sbjct: 385 TMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVE 444

Query: 401 ------------------PDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFN 442
                             P+L TY IL+D LCKN  + EA+ L   +E +  +  I++ N
Sbjct: 445 RLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNN 504

Query: 443 CLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKN 502
             IDG+C+AG L+ A +LF  L  KGL P V TYSIMI+GLCR+G L++A+     M++N
Sbjct: 505 IAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDEN 564

Query: 503 GCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYH 562
           GC  N   +NT+  GFL+NN+TS+ ++LL +M    R    D +T ++ V +L+ D    
Sbjct: 565 GCTLNGCIYNTITRGFLRNNETSRAIQLLQEMV--ARGFSADASTMTLFVKMLSDDGLDQ 622

Query: 563 ECSAVSKSSYRACLYVTIFQPSS 585
               + ++    C +++ F  SS
Sbjct: 623 SLKQILRN---GCKWISTFDSSS 642



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 121/433 (27%), Positives = 205/433 (47%), Gaps = 38/433 (8%)

Query: 173 RLHKKMVSGDYENGLISKTN----------IFSYSIIIDSLCKEGLVDKAKELFLEMKGR 222
           R H K +  +  +G IS  N             ++ ++ S+ K         L  +M   
Sbjct: 31  RFHSKSLHFNTIDGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSF 90

Query: 223 GINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEA 282
           GI P +     LI+ FC          +  ++L LG +P+  TF  +I  +C  GKI EA
Sbjct: 91  GIPPNIYTLHILINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGICVEGKIGEA 150

Query: 283 NGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILING 342
             L + MI  G  PD  TY +L++G C VG    A  +  SM  K C+  V +YN +I+ 
Sbjct: 151 LHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDS 210

Query: 343 YCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPD 402
            CK   V EA +L+ ++++ G+   + TYN+L+  L    +  +   L +EM    + PD
Sbjct: 211 LCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPD 270

Query: 403 LSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFH 462
           + ++N ++D LCK   V EA  +   +     E  +  +  L+DG C    +D A ++F 
Sbjct: 271 VVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFD 330

Query: 463 KLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEK-------------------NG 503
            +  KG +P V++Y+ +I+G C+  +++KA  +   M+                     G
Sbjct: 331 TMVCKGCMPNVISYNTLINGYCKIQRIDKAIHYTXLMDXXCCYLNMDEAVKVFDTMVCKG 390

Query: 504 CAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEK--- 560
           C PNV+++NTL++G+ +  +  K + L  +M   E  L+PD  T+S ++  L   E+   
Sbjct: 391 CMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQE--LIPDTVTYSTLIHGLCHVERLQD 448

Query: 561 ----YHECSAVSK 569
               +HE  A S+
Sbjct: 449 AIALFHEMVACSQ 461


>gi|225451352|ref|XP_002274891.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 577

 Score =  386 bits (991), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 207/531 (38%), Positives = 312/531 (58%), Gaps = 36/531 (6%)

Query: 56  LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNI 115
           L++A   F  M HM P P I+ F  L  ++ K +HY  V+S   ++ S G+ P+  TLNI
Sbjct: 40  LDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNI 99

Query: 116 LINCFGNKER----------------------------GLCVENRIKEATWLFKNMIAFG 147
           LIN F + +R                            GLCVE +I E   LF  MI  G
Sbjct: 100 LINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEG 159

Query: 148 VRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEG 207
            +P+V+TYGTLING C+ G+ S A+RL + M  G+       + ++  Y+ IIDSLCK+ 
Sbjct: 160 FQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGN------CQPDVVVYTSIIDSLCKDR 213

Query: 208 LVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFN 267
            V +A  LF EM  +GI+P++    +LIH  C    W+ V  L  EM++    PN++ F+
Sbjct: 214 QVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFS 273

Query: 268 VMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSK 327
            ++D LCK GK+ EA+ ++++MI+RG+ P+  TYN+LMDG+CL   +D A ++F +M  K
Sbjct: 274 TVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCK 333

Query: 328 GCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYA 387
           G    VVSY+ LINGYCKI  +E+AM L+ ++    +    +TY+TL+ GL   G+   A
Sbjct: 334 GFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDA 393

Query: 388 QKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDG 447
             LF EM      PD  +Y IL+D LCKN  + EA+ L   +E +  +  I+I+  +IDG
Sbjct: 394 IALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDG 453

Query: 448 LCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPN 507
           +C+AG L+ A +LF  L  KGL P V TY+IMI+GLC++G L +A+     M++ G +PN
Sbjct: 454 MCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPN 513

Query: 508 VVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKD 558
             T+N +  GFL+NN+T + ++LL +M    R    D +T +++V++L+ D
Sbjct: 514 GCTYNLITRGFLRNNETLRGIQLLQEML--ARGFSADVSTSTVLVEMLSDD 562



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 51/191 (26%), Positives = 86/191 (45%), Gaps = 2/191 (1%)

Query: 370 TYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHML 429
           ++NT  S          A   F+ M   +  P ++ +  L+  + K       + L H +
Sbjct: 26  SHNTFHSKSLNFNTLDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQM 85

Query: 430 EMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKL 489
           +       I   N LI+  C   RL  A+ +  K+ + G  P + T++ +I GLC +GK+
Sbjct: 86  DSFGIPPNIYTLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKI 145

Query: 490 EKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFS 549
            +       M   G  PNVVT+ TL++G  +   TS  + LL  M +   N  PD   ++
Sbjct: 146 GEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQG--NCQPDVVVYT 203

Query: 550 IVVDLLAKDEK 560
            ++D L KD +
Sbjct: 204 SIIDSLCKDRQ 214


>gi|334182516|ref|NP_172730.3| helicase domain and pentatricopeptide repeat-containing protein
           [Arabidopsis thaliana]
 gi|332190794|gb|AEE28915.1| helicase domain and pentatricopeptide repeat-containing protein
           [Arabidopsis thaliana]
          Length = 735

 Score =  385 bits (989), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 207/587 (35%), Positives = 335/587 (57%), Gaps = 51/587 (8%)

Query: 21  LSSLFKS-PRQIAAVSSPETQLNEFLHENCKSGIINL--NEARYFFGYMTHMQPSPPISS 77
           +SS F S  R  +++S+     N    E  +SGI+++  ++A   F  M   +P P +  
Sbjct: 35  ISSFFSSCERDFSSISNG----NVCFRERLRSGIVDIKKDDAIALFQEMIRSRPLPSLVD 90

Query: 78  FNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCF----------------- 120
           F+  F A+A+ + ++ V+ F ++L   G+  +  TLNI+INCF                 
Sbjct: 91  FSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVM 150

Query: 121 -----------GNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLS 169
                          +GL +E ++ EA  L   M+  G +PDV+TY +++NG CR+G+ S
Sbjct: 151 KLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTS 210

Query: 170 VALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVV 229
           +AL L +KM   +       K ++F+YS IIDSLC++G +D A  LF EM+ +GI  +VV
Sbjct: 211 LALDLLRKMEERNV------KADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVV 264

Query: 230 VCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELM 289
              +L+ G C AG W +   L  +M+     PN++TFNV++D   K GK+ EAN L + M
Sbjct: 265 TYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEM 324

Query: 290 IQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNV 349
           I RG++P+  TYN+LMDGYC+  R+  A  +   M    C   +V++  LI GYC +  V
Sbjct: 325 ITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRV 384

Query: 350 EEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNIL 409
           ++ M ++R I   G+    +TY+ L+ G  Q+G+   A++LF EM  + V PD+ TY IL
Sbjct: 385 DDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGIL 444

Query: 410 IDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGL 469
           +DGLC N  +++A+++F  L+ +K + GI ++  +I+G+CK G++++AW LF  LP KG+
Sbjct: 445 LDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGV 504

Query: 470 VPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVE 529
            P V+TY++MI GLC+KG L +AN  L  ME++G APN  T+NTL+   L++   +   +
Sbjct: 505 KPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAK 564

Query: 530 LLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKSSYRACL 576
           L+ +M         D ++  +V+D+L         SA+ + + R CL
Sbjct: 565 LIEEMKSC--GFSADASSIKMVIDMLL--------SAMKRLTLRYCL 601


>gi|9502386|gb|AAF88093.1|AC025417_21 T12C24.22 [Arabidopsis thaliana]
          Length = 1245

 Score =  385 bits (989), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 207/587 (35%), Positives = 335/587 (57%), Gaps = 51/587 (8%)

Query: 21  LSSLFKS-PRQIAAVSSPETQLNEFLHENCKSGIINL--NEARYFFGYMTHMQPSPPISS 77
           +SS F S  R  +++S+     N    E  +SGI+++  ++A   F  M   +P P +  
Sbjct: 25  ISSFFSSCERDFSSISNG----NVCFRERLRSGIVDIKKDDAIALFQEMIRSRPLPSLVD 80

Query: 78  FNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCF----------------- 120
           F+  F A+A+ + ++ V+ F ++L   G+  +  TLNI+INCF                 
Sbjct: 81  FSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVM 140

Query: 121 -----------GNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLS 169
                          +GL +E ++ EA  L   M+  G +PDV+TY +++NG CR+G+ S
Sbjct: 141 KLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTS 200

Query: 170 VALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVV 229
           +AL L +KM   +       K ++F+YS IIDSLC++G +D A  LF EM+ +GI  +VV
Sbjct: 201 LALDLLRKMEERNV------KADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVV 254

Query: 230 VCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELM 289
              +L+ G C AG W +   L  +M+     PN++TFNV++D   K GK+ EAN L + M
Sbjct: 255 TYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEM 314

Query: 290 IQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNV 349
           I RG++P+  TYN+LMDGYC+  R+  A  +   M    C   +V++  LI GYC +  V
Sbjct: 315 ITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRV 374

Query: 350 EEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNIL 409
           ++ M ++R I   G+    +TY+ L+ G  Q+G+   A++LF EM  + V PD+ TY IL
Sbjct: 375 DDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGIL 434

Query: 410 IDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGL 469
           +DGLC N  +++A+++F  L+ +K + GI ++  +I+G+CK G++++AW LF  LP KG+
Sbjct: 435 LDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGV 494

Query: 470 VPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVE 529
            P V+TY++MI GLC+KG L +AN  L  ME++G APN  T+NTL+   L++   +   +
Sbjct: 495 KPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAK 554

Query: 530 LLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKSSYRACL 576
           L+ +M         D ++  +V+D+L         SA+ + + R CL
Sbjct: 555 LIEEMKSC--GFSADASSIKMVIDML--------LSAMKRLTLRYCL 591



 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 132/539 (24%), Positives = 236/539 (43%), Gaps = 71/539 (13%)

Query: 23  SLFKSPRQIAAVSSPETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLF 82
           SLFK   +   + S     N  +   CK+G    N+       M   +  P + +FN+L 
Sbjct: 239 SLFKE-METKGIKSSVVTYNSLVRGLCKAG--KWNDGALLLKDMVSREIVPNVITFNVLL 295

Query: 83  GAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILIN--CFGNKE---------------- 124
               K          Y+++++ G+ P+ +T N L++  C  N+                 
Sbjct: 296 DVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCS 355

Query: 125 ----------RGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRL 174
                     +G C+  R+ +   +F+N+   G+  + +TY  L+ GFC++G + +A  L
Sbjct: 356 PDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEEL 415

Query: 175 HKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTL 234
            ++MVS    +G++   ++ +Y I++D LC  G ++KA E+F +++   ++  +V+ TT+
Sbjct: 416 FQEMVS----HGVLP--DVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTI 469

Query: 235 IHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGL 294
           I G C  G  E+   LF  +   G +PN++T+ VMI  LCK G ++EAN LL  M + G 
Sbjct: 470 IEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGN 529

Query: 295 NPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILIN-----------GY 343
            P+  TYN+L+  +   G +  + ++   M S G      S  ++I+            Y
Sbjct: 530 APNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLSAMKRLTLRY 589

Query: 344 CKILNVEEAMSLYRQIISNGVRQTVITY------NTLLSGL----FQAGQAGYAQKLFDE 393
           C     +    L     S  +R + +T+      NT+ + L     +A     A+   D 
Sbjct: 590 CLSKGSKSRQDLLELSGSEKIRLSSLTFVKMFPCNTITTSLNVNTIEARGMNSAELNRDL 649

Query: 394 MKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGR 453
            KL          N  +  L  N  +   ++      M   E   +     +    +AGR
Sbjct: 650 RKLRRSSVLKKFKNRDVRVLVTNELLTWGLEDAECDLMVDLELPTDA----VHYAHRAGR 705

Query: 454 LD---------NAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNG 503
           +           A EL  ++ Q+G+ P  +TYS +I G C++ +L++AN  L  M   G
Sbjct: 706 MRRPGRKMTVVTAEELHKEMIQRGIAPNTITYSSLIDGFCKENRLDEANQMLDLMVTKG 764



 Score = 46.2 bits (108), Expect = 0.051,   Method: Compositional matrix adjust.
 Identities = 21/56 (37%), Positives = 35/56 (62%)

Query: 250 LFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLM 305
           L  EM+  G  PN +T++ +ID  CK  +++EAN +L+LM+ +G +  R+    LM
Sbjct: 721 LHKEMIQRGIAPNTITYSSLIDGFCKENRLDEANQMLDLMVTKGDSDIRYLLAGLM 776


>gi|224130786|ref|XP_002328376.1| predicted protein [Populus trichocarpa]
 gi|222838091|gb|EEE76456.1| predicted protein [Populus trichocarpa]
          Length = 599

 Score =  385 bits (988), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 211/534 (39%), Positives = 311/534 (58%), Gaps = 36/534 (6%)

Query: 54  INLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTL 113
           I++++A   F  M  M P P +  F    G++AK + Y  V+S   ++   G+  +  +L
Sbjct: 71  ISIDDALASFYRMLRMNPRPSVVEFGRFLGSIAKKKQYSTVVSLCNQMDLFGVTHNVYSL 130

Query: 114 NILINC----------------------------FGNKERGLCVENRIKEATWLFKNMIA 145
           NILINC                            F     G C+E  IKEA  LF  M+ 
Sbjct: 131 NILINCLCRLNHVVFAISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVR 190

Query: 146 FGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCK 205
            G +PDVI+Y T+ING C++GN S+AL+L +KM     E G   K N+ +Y+ IIDSLCK
Sbjct: 191 RGHQPDVISYSTVINGLCKSGNTSMALQLLRKM----EEKG--CKPNLVAYTTIIDSLCK 244

Query: 206 EGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLT 265
           + LV+ A +L  EM  RGI P VV  +T++HGFC  G+  E   LF EM+     PN +T
Sbjct: 245 DTLVNDAMDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVT 304

Query: 266 FNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMH 325
           F +++D LCK G ++EA  + E M ++G  P+ +TYN+LMDGYCL  ++D A+++   M 
Sbjct: 305 FTILVDGLCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMV 364

Query: 326 SKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAG 385
            KGC   V SYNILINGYCK   ++EA SL  ++    +    +TY+TL+ GL Q G+  
Sbjct: 365 DKGCAPVVHSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQ 424

Query: 386 YAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLI 445
            A  LF EM    + PDL TY+ L+DGLCK+  + EA+KL   ++ +K E  I ++N LI
Sbjct: 425 EALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPDIVLYNILI 484

Query: 446 DGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCA 505
           +G+  AG+L+ A ELF KL   G+ PT+ TY+IMI GL ++G  ++A +    ME +G  
Sbjct: 485 EGMFIAGKLEVAKELFSKLFADGIQPTIRTYTIMIKGLLKEGLSDEAYELFRKMEDDGFL 544

Query: 506 PNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDE 559
           PN  ++N ++ GFLQN  +S  + L+ +M    +    D +TF +++DL ++DE
Sbjct: 545 PNSCSYNVIIQGFLQNQDSSTAIRLIDEMV--GKRFSADSSTFQMLLDLESRDE 596



 Score =  208 bits (529), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 131/439 (29%), Positives = 212/439 (48%), Gaps = 45/439 (10%)

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKT- 191
           I +A   F  M+    RP V+ +G  +    +    S  + L  +M        L   T 
Sbjct: 73  IDDALASFYRMLRMNPRPSVVEFGRFLGSIAKKKQYSTVVSLCNQM-------DLFGVTH 125

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
           N++S +I+I+ LC+                  +N  V   + L                 
Sbjct: 126 NVYSLNILINCLCR------------------LNHVVFAISVLG---------------- 151

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
            +M  LG +P+ +TFN +I+  C  G+I EA GL   M++RG  PD  +Y+++++G C  
Sbjct: 152 -KMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRRGHQPDVISYSTVINGLCKS 210

Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
           G    A ++   M  KGCK  +V+Y  +I+  CK   V +AM L  +++  G+   V+TY
Sbjct: 211 GNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAMDLLSEMVDRGIPPDVVTY 270

Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
           +T+L G    G    A  LF+EM   NV P+  T+ IL+DGLCK   V EA  +F  +  
Sbjct: 271 STILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDGLCKEGMVSEARCVFEAMTK 330

Query: 432 NKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEK 491
              E     +N L+DG C   ++D A ++   +  KG  P V +Y+I+I+G C++ +L++
Sbjct: 331 KGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPVVHSYNILINGYCKRRRLDE 390

Query: 492 ANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIV 551
           A   L+ M +    P+ VT++TLM G  Q  +  + + L  +M      L+PD  T+S +
Sbjct: 391 AKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSS--GLLPDLMTYSTL 448

Query: 552 VDLLAKDEKYHECSAVSKS 570
           +D L K     E   + KS
Sbjct: 449 LDGLCKHGHLDEALKLLKS 467


>gi|193806393|sp|P0C7Q7.1|PPR38_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial; Flags: Precursor
          Length = 602

 Score =  383 bits (984), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 203/570 (35%), Positives = 328/570 (57%), Gaps = 43/570 (7%)

Query: 21  LSSLFKS-PRQIAAVSSPETQLNEFLHENCKSGIINL--NEARYFFGYMTHMQPSPPISS 77
           +SS F S  R  +++S+     N    E  +SGI+++  ++A   F  M   +P P +  
Sbjct: 35  ISSFFSSCERDFSSISNG----NVCFRERLRSGIVDIKKDDAIALFQEMIRSRPLPSLVD 90

Query: 78  FNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCF----------------- 120
           F+  F A+A+ + ++ V+ F ++L   G+  +  TLNI+INCF                 
Sbjct: 91  FSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVM 150

Query: 121 -----------GNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLS 169
                          +GL +E ++ EA  L   M+  G +PDV+TY +++NG CR+G+ S
Sbjct: 151 KLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTS 210

Query: 170 VALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVV 229
           +AL L +KM   +       K ++F+YS IIDSLC++G +D A  LF EM+ +GI  +VV
Sbjct: 211 LALDLLRKMEERNV------KADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVV 264

Query: 230 VCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELM 289
              +L+ G C AG W +   L  +M+     PN++TFNV++D   K GK+ EAN L + M
Sbjct: 265 TYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEM 324

Query: 290 IQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNV 349
           I RG++P+  TYN+LMDGYC+  R+  A  +   M    C   +V++  LI GYC +  V
Sbjct: 325 ITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRV 384

Query: 350 EEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNIL 409
           ++ M ++R I   G+    +TY+ L+ G  Q+G+   A++LF EM  + V PD+ TY IL
Sbjct: 385 DDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGIL 444

Query: 410 IDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGL 469
           +DGLC N  +++A+++F  L+ +K + GI ++  +I+G+CK G++++AW LF  LP KG+
Sbjct: 445 LDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGV 504

Query: 470 VPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVE 529
            P V+TY++MI GLC+KG L +AN  L  ME++G APN  T+NTL+   L++   +   +
Sbjct: 505 KPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAK 564

Query: 530 LLHKMAEPERNLVPDDTTFSIVVDLLAKDE 559
           L+ +M         D ++  +V+D+L   E
Sbjct: 565 LIEEMKSC--GFSADASSIKMVIDMLLSGE 592



 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 66/255 (25%), Positives = 123/255 (48%), Gaps = 2/255 (0%)

Query: 315 DTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTL 374
           D A  +F  M       ++V ++   +   +       +   +Q+  NG+   + T N +
Sbjct: 70  DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIM 129

Query: 375 LSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKF 434
           ++   +  +  +A  +  ++     EPD +T+N LI GL     V EAV L   +  N  
Sbjct: 130 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGC 189

Query: 435 EFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKAND 494
           +  +  +N +++G+C++G    A +L  K+ ++ +   V TYS +I  LCR G ++ A  
Sbjct: 190 QPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAIS 249

Query: 495 FLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDL 554
               ME  G   +VVT+N+L+ G  +  K +    LL  M    R +VP+  TF++++D+
Sbjct: 250 LFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVS--REIVPNVITFNVLLDV 307

Query: 555 LAKDEKYHECSAVSK 569
             K+ K  E + + K
Sbjct: 308 FVKEGKLQEANELYK 322


>gi|225452992|ref|XP_002263038.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 644

 Score =  383 bits (983), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 206/545 (37%), Positives = 311/545 (57%), Gaps = 42/545 (7%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
           +++LH N       L++A   F  M HM P P I  F  +  ++ K + Y  V+S  RK+
Sbjct: 47  SKYLHFN------TLDDALSSFNRMLHMHPPPSIVDFAKILTSITKVKRYSTVLSLSRKM 100

Query: 102 VSIGLLPDFLTLNILINCFGNKER----------------------------GLCVENRI 133
            S G+  +  TLN+LIN F +  R                            GLC+E +I
Sbjct: 101 DSFGIPHNVYTLNVLINSFCHLNRVNFAFSVLAKILKLGCQPDTASFTTLIKGLCLEGQI 160

Query: 134 KEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNI 193
            EA  LF  MI  G +PDV+ Y TLING C+TG+ S A+RL + M  G+       + ++
Sbjct: 161 GEALHLFDKMIWEGFQPDVVIYATLINGLCKTGHTSAAIRLLRSMEKGN------CQPDV 214

Query: 194 FSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIE 253
             Y  +I SLCK+    +A  LF EM  +GI+P +V C +L++  C  G W+ VN L  E
Sbjct: 215 VVYGTLIHSLCKDRQQTQAFNLFSEMITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNE 274

Query: 254 MLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGR 313
           M+D    PN ++   ++D LCK G + +A+ ++++M Q G+ PD  TY +L+DG+CL   
Sbjct: 275 MVDSKIMPNAISLTTVVDALCKEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDGHCLRSE 334

Query: 314 IDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNT 373
           +D A ++F  M  KGC   V SYN LINGYCKI  +++AM L+ ++    +    +TYNT
Sbjct: 335 MDEAVKVFDMMVHKGCAPNVFSYNTLINGYCKIERMDKAMYLFEEMCRQKLIPNTVTYNT 394

Query: 374 LLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNK 433
           L+ GL   G+   A  LF EM      PDL TY IL+D LCKN  + +A+ L   +E + 
Sbjct: 395 LIHGLCHVGRLQDAIALFREMVACGQIPDLVTYRILLDYLCKNCHLDKAMALLKAIEGSN 454

Query: 434 FEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKAN 493
            +  I+I+  +IDG+C+AG L++A +LF  L  KGL P V TY+IM HGLC++G L++A 
Sbjct: 455 LDPDIQIYTIVIDGMCRAGELEDARDLFSNLSSKGLKPNVWTYNIMTHGLCKRGLLDEAT 514

Query: 494 DFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
              + M++N C+ +  T+NT+  GFL+NN+TS+ ++LL +M    R    D +T +++V 
Sbjct: 515 KLFMEMDENACSADGCTYNTITQGFLRNNETSRAIQLLEEML--ARGFSCDVSTTTLLVG 572

Query: 554 LLAKD 558
           +L+ D
Sbjct: 573 MLSDD 577


>gi|225427482|ref|XP_002263209.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 592

 Score =  380 bits (975), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 201/531 (37%), Positives = 305/531 (57%), Gaps = 36/531 (6%)

Query: 56  LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNI 115
           ++EA   F  M HMQP P +  F  +  ++A  +HY  V+S  +++ S+G+  D  TL I
Sbjct: 55  IDEALSSFNRMLHMQPPPSVVDFAKILTSIANMKHYSTVLSLSKQMDSLGIPSDVYTLAI 114

Query: 116 LINCF-------------------GNKE---------RGLCVENRIKEATWLFKNMIAFG 147
           +IN F                   G++          RGLCVE +I EA  LF  M+  G
Sbjct: 115 VINSFCHLNRVDFGFSVLAKIFKLGHQPDTATFTTLIRGLCVEGKIGEALHLFDKMVGEG 174

Query: 148 VRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEG 207
            +P+ +TYGTLI+G C+ GN   A+RL + MV  + E       N+ +Y+ IID L K+ 
Sbjct: 175 FQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKNCE------PNVITYNTIIDCLFKDR 228

Query: 208 LVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFN 267
            V++A  +F EM  +GI+P V    ++IHG C    W+ V  L  EM+D    PN++ F 
Sbjct: 229 QVNEALNIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFT 288

Query: 268 VMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSK 327
            ++D LCK G +  A+ ++++MIQRG+ PD  TY +LMDG+CL   +D A ++F +M  K
Sbjct: 289 TLVDALCKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTMVRK 348

Query: 328 GCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYA 387
           GC   V+SY+ LINGYCKI  +++AM L+ ++    +   ++TYNTL+ GL   G+   A
Sbjct: 349 GCAPNVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRLRDA 408

Query: 388 QKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDG 447
             LF EM      PDL TY IL+D LCK   + +A+ +   +E +     I+ +N +IDG
Sbjct: 409 IALFHEMVASGQIPDLVTYRILLDYLCKTRHLDQAMAMLKAIEGSNLAPDIQSYNIVIDG 468

Query: 448 LCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPN 507
           +C+ G L+ A +LF  L  KGL P V TY+IMI+GLC +G L +A      M  +GC+P+
Sbjct: 469 MCRVGELEAAGDLFSSLSSKGLHPDVWTYTIMINGLCLQGLLAEATKLFREMNTDGCSPD 528

Query: 508 VVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKD 558
             T+N +  GFL+NN+T   ++LL +M    R    D +T +++V++L+ D
Sbjct: 529 DCTYNLITRGFLRNNETLSAIQLLQEML--GRGFSADASTITLIVEMLSDD 577



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 128/423 (30%), Positives = 209/423 (49%), Gaps = 8/423 (1%)

Query: 131 NRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISK 190
           N I EA   F  M+     P V+ +  ++       + S  L L K+M      + L   
Sbjct: 53  NTIDEALSSFNRMLHMQPPPSVVDFAKILTSIANMKHYSTVLSLSKQM------DSLGIP 106

Query: 191 TNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGL 250
           +++++ +I+I+S C    VD    +  ++   G  P     TTLI G C  G   E   L
Sbjct: 107 SDVYTLAIVINSFCHLNRVDFGFSVLAKIFKLGHQPDTATFTTLIRGLCVEGKIGEALHL 166

Query: 251 FIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCL 310
           F +M+  G +PN +T+  +I  LCK G    A  LL  M+Q+   P+  TYN+++D    
Sbjct: 167 FDKMVGEGFQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKNCEPNVITYNTIIDCLFK 226

Query: 311 VGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVIT 370
             +++ A  IF  M +KG    V +YN +I+G CK    +   +L  +++ + +   V+ 
Sbjct: 227 DRQVNEALNIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVI 286

Query: 371 YNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLE 430
           + TL+  L + G    A  + D M    VEPD+ TY  L+DG C  + + EA K+F  + 
Sbjct: 287 FTTLVDALCKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTMV 346

Query: 431 MNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLE 490
                  +  ++ LI+G CK  R+D A  LF ++ Q+ LVP +VTY+ +IHGLC  G+L 
Sbjct: 347 RKGCAPNVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRLR 406

Query: 491 KANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSI 550
            A      M  +G  P++VT+  L+    +     + + +L   A    NL PD  +++I
Sbjct: 407 DAIALFHEMVASGQIPDLVTYRILLDYLCKTRHLDQAMAMLK--AIEGSNLAPDIQSYNI 464

Query: 551 VVD 553
           V+D
Sbjct: 465 VID 467



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 36/120 (30%), Positives = 63/120 (52%), Gaps = 2/120 (1%)

Query: 444 LIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNG 503
           +I+  C   R+D  + +  K+ + G  P   T++ +I GLC +GK+ +A      M   G
Sbjct: 115 VINSFCHLNRVDFGFSVLAKIFKLGHQPDTATFTTLIRGLCVEGKIGEALHLFDKMVGEG 174

Query: 504 CAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
             PN VT+ TL+HG  +   +   + LL  M +  +N  P+  T++ ++D L KD + +E
Sbjct: 175 FQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQ--KNCEPNVITYNTIIDCLFKDRQVNE 232


>gi|225189439|emb|CAR70003.1| pentatricopeptide repeat(PPR)-containing protein At1g12700
           [Arabidopsis thaliana]
          Length = 602

 Score =  379 bits (973), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 197/554 (35%), Positives = 320/554 (57%), Gaps = 38/554 (6%)

Query: 36  SPETQLNEFLHENCKSGIINL--NEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDA 93
           S  T  N    E  +SGI+++  ++A   F  M   +P P +  F+  F A+A+ + ++ 
Sbjct: 47  SSITNGNVCFRERLRSGIVDIKKDDAIALFQEMIRSRPLPGLVDFSRFFSAIARTKQFNL 106

Query: 94  VISFYRKLVSIGLLPDFLTLNILINCF-------------GNKER--------------- 125
           V+ F ++L   G+  +  TLNI+INCF             G   +               
Sbjct: 107 VLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIN 166

Query: 126 GLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYEN 185
           GLC+E ++ +A  L   M+  G +PD++TY +++NG CR+G+ S+A  + +KM   +   
Sbjct: 167 GLCLEGKVSKAVVLVDRMVENGCQPDMVTYNSIVNGICRSGDTSLAFDMLRKMEERNV-- 224

Query: 186 GLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWE 245
               K ++F+YS IIDSLC++G +D A  LF EM+ +GI  +VV   +L+ G C AG W 
Sbjct: 225 ----KADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWN 280

Query: 246 EVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLM 305
           +   L  +M+     PN++TFNV++D   K GK+ EAN L + MI RG++P+  TYN+LM
Sbjct: 281 DGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLM 340

Query: 306 DGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVR 365
           DGYC+  R+  A  +   M    C   +V++  LI GYC +  V++ M ++R I   G+ 
Sbjct: 341 DGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLV 400

Query: 366 QTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKL 425
              +TY+ L+ G  Q+G+   A++LF EM  + V PD+ TY IL+DGLC N  +++A+++
Sbjct: 401 ANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEI 460

Query: 426 FHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCR 485
           F  L+ +K + GI ++  +I+G+CK G++++AW LF  LP KG+ P V+TY++MI GLC+
Sbjct: 461 FEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCK 520

Query: 486 KGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDD 545
           KG L +AN  L  ME++G APN  T+NTL+   L++   +   +L+ +M         D 
Sbjct: 521 KGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSC--GFSADA 578

Query: 546 TTFSIVVDLLAKDE 559
           ++  +V+D+L   E
Sbjct: 579 SSIKMVIDMLLSGE 592



 Score =  108 bits (271), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 60/213 (28%), Positives = 113/213 (53%), Gaps = 2/213 (0%)

Query: 357 RQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKN 416
           +Q+  NG+   + T N +++   +  +  +A  +  ++     EPD +T+N LI+GLC  
Sbjct: 112 KQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLE 171

Query: 417 NCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTY 476
             V +AV L   +  N  +  +  +N +++G+C++G    A+++  K+ ++ +   V TY
Sbjct: 172 GKVSKAVVLVDRMVENGCQPDMVTYNSIVNGICRSGDTSLAFDMLRKMEERNVKADVFTY 231

Query: 477 SIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAE 536
           S +I  LCR G ++ A      ME  G   +VVT+N+L+ G  +  K +    LL  M  
Sbjct: 232 STIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVS 291

Query: 537 PERNLVPDDTTFSIVVDLLAKDEKYHECSAVSK 569
             R +VP+  TF++++D+  K+ K  E + + K
Sbjct: 292 --REIVPNVITFNVLLDVFVKEGKLQEANELYK 322


>gi|296087909|emb|CBI35192.3| unnamed protein product [Vitis vinifera]
          Length = 1001

 Score =  379 bits (972), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 198/503 (39%), Positives = 295/503 (58%), Gaps = 15/503 (2%)

Query: 56  LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNI 115
           L+EA   F  M H QP P    FN L  ++AK +H+  ++S  R++ S G+ PD  TL I
Sbjct: 26  LDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAI 85

Query: 116 LINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLH 175
           +IN        LC  NR+  A      ++  G +PD  T+ TLI G C  G +  AL L 
Sbjct: 86  VIN-------SLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLF 138

Query: 176 KKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLI 235
            KM+   ++       N+ +Y  +I+ LCK+  V +A  +F EM  +GI+P +V   +LI
Sbjct: 139 DKMIGEGFQ------PNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLI 192

Query: 236 HGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLN 295
           HG C    W+ V  L  EM+D    P++ T N ++D LCK G + EA+ ++++MI RG+ 
Sbjct: 193 HGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVE 252

Query: 296 PDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSL 355
           P+  TYN+LMDG+CL   +D A ++F +M  K C   V+SYN LINGYCKI +V++AM L
Sbjct: 253 PNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYL 312

Query: 356 YRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCK 415
           + ++    +    +TYNTL+ GL   G+   A  LF EM      PDL TY  L D LCK
Sbjct: 313 FEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCK 372

Query: 416 NNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVT 475
           N  + +A+ L   +E + ++  I+I+  ++DG+C+AG L++A +LF  L  KGL P V T
Sbjct: 373 NRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWT 432

Query: 476 YSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMA 535
           Y+IMIHGLC++G L +A+     M KNGC+PN  T+N +  GFL+NN+  + +ELL +M 
Sbjct: 433 YNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEML 492

Query: 536 EPERNLVPDDTTFSIVVDLLAKD 558
              R    D +T +++V +L+ D
Sbjct: 493 --ARGFSVDVSTTTLLVGMLSDD 513



 Score =  281 bits (719), Expect = 7e-73,   Method: Compositional matrix adjust.
 Identities = 160/452 (35%), Positives = 234/452 (51%), Gaps = 61/452 (13%)

Query: 56  LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNI 115
           L++A   F  M HM P P    F  L  ++AK +HY  V+S                   
Sbjct: 562 LDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLS------------------- 602

Query: 116 LINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLH 175
                                  L   M +FG+ PDV T   LIN FC    L  A  + 
Sbjct: 603 -----------------------LSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSVL 639

Query: 176 KKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLI 235
            K++   ++       ++ +Y  +++ LCK             M  +GI+P +    +LI
Sbjct: 640 AKLLKLGFQ------PDVVTYGTLMNGLCK-------------MITKGISPDIFTYNSLI 680

Query: 236 HGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLN 295
           H  C    W+ V  L  EM++    PN++ F+ ++D LCK G I  A+ ++++MI+RG+ 
Sbjct: 681 HALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVE 740

Query: 296 PDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSL 355
           PD  TY +LMDG+CL   +D A ++F +M  KGC   V SYNILINGYC+I  +++AM L
Sbjct: 741 PDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGL 800

Query: 356 YRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCK 415
             Q+   G+    +TYNTL+ GL   G+  +A  LF EM      PDL TY IL+D LCK
Sbjct: 801 LEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCK 860

Query: 416 NNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVT 475
           N+ + EA+ L   +E +  +  I ++N  IDG+C+AG L+ A +LF  L  KGL P V T
Sbjct: 861 NHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRT 920

Query: 476 YSIMIHGLCRKGKLEKANDFLLYMEKNGCAPN 507
           Y+IMIHGLC++G L++AN     M++N    N
Sbjct: 921 YNIMIHGLCKRGLLDEANKLFRKMDENDIWSN 952



 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 140/593 (23%), Positives = 242/593 (40%), Gaps = 111/593 (18%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISF---- 97
           N  +H  C  G   L +A   F  M      P + ++  L   + KNRH D  ++     
Sbjct: 329 NTLIHGLCHVG--RLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAI 386

Query: 98  -------------------------------YRKLVSIGLLPDFLTLNILINCFGNKERG 126
                                          +  L S GL P+  T NI+I+       G
Sbjct: 387 EGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIH-------G 439

Query: 127 LCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENG 186
           LC +  + EA+ LF  M   G  P+  TY  +  GF R       + L ++M++  +   
Sbjct: 440 LCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFS-- 497

Query: 187 LISKTNIFSYSIIIDSLCKEGL-------------------------------------- 208
                ++ + ++++  L  +GL                                      
Sbjct: 498 ----VDVSTTTLLVGMLSDDGLDQSVKQILCKPSSSSRPSGTQMRSLPPLFLSSSHNSLH 553

Query: 209 --------VDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPR 260
                   +D A   F  M      P+ V  T L+       ++  V  L  +M   G  
Sbjct: 554 SRSPHFNTLDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIP 613

Query: 261 PNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREI 320
           P++ T N++I+  C   ++  A  +L  +++ G  PD  TY +LM+G C           
Sbjct: 614 PDVYTLNILINSFCHLRRLGYAFSVLAKLLKLGFQPDVVTYGTLMNGLC----------- 662

Query: 321 FLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQ 380
              M +KG    + +YN LI+  C +   +   +L  +++++ +   V+ ++T++  L +
Sbjct: 663 --KMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCK 720

Query: 381 AGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEI 440
            G    A  + D M    VEPD+ TY  L+DG C  + + EAVK+F  +        +  
Sbjct: 721 EGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRS 780

Query: 441 FNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYME 500
           +N LI+G C+  R+D A  L  ++  +GL+   VTY+ +IHGLC  G+L+ A      M 
Sbjct: 781 YNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMV 840

Query: 501 KNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
            +G  P++VT+  L+    +N+  ++ + LL   A    NL  D   ++I +D
Sbjct: 841 ASGQIPDLVTYRILLDYLCKNHHLAEAMVLLK--AIEGSNLDADILVYNIAID 891



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 129/534 (24%), Positives = 224/534 (41%), Gaps = 60/534 (11%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
           N  +H  CK G+  L EA   F  M     SP   ++NL+     +N      I    ++
Sbjct: 434 NIMIHGLCKQGL--LAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEM 491

Query: 102 VSIGLLPDFLTLNILINCFGNK------ERGLCVE------------------------- 130
           ++ G   D  T  +L+    +       ++ LC                           
Sbjct: 492 LARGFSVDVSTTTLLVGMLSDDGLDQSVKQILCKPSSSSRPSGTQMRSLPPLFLSSSHNS 551

Query: 131 --------NRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGD 182
                   N + +A   F  M+     P  + +  L+    +  + S  L L  +M S  
Sbjct: 552 LHSRSPHFNTLDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFG 611

Query: 183 YENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAG 242
                    ++++ +I+I+S C    +  A  +  ++   G  P VV   TL++G C   
Sbjct: 612 I------PPDVYTLNILINSFCHLRRLGYAFSVLAKLLKLGFQPDVVTYGTLMNGLC--- 662

Query: 243 NWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYN 302
                     +M+  G  P++ T+N +I  LC   +      LL  M+   + P+   ++
Sbjct: 663 ----------KMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFS 712

Query: 303 SLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISN 362
           +++D  C  G I  A ++   M  +G +  VV+Y  L++G+C    ++EA+ ++  ++  
Sbjct: 713 TVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHK 772

Query: 363 GVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEA 422
           G    V +YN L++G  Q  +   A  L ++M L  +  D  TYN LI GLC    +Q A
Sbjct: 773 GCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHA 832

Query: 423 VKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHG 482
           + LFH +  +     +  +  L+D LCK   L  A  L   +    L   ++ Y+I I G
Sbjct: 833 IALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDG 892

Query: 483 LCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAE 536
           +CR G+LE A D    +   G  P+V T+N ++HG  +     +  +L  KM E
Sbjct: 893 MCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKMDE 946



 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 43/151 (28%), Positives = 66/151 (43%), Gaps = 9/151 (5%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
           N  +H  C  G   L  A   F  M      P + ++ +L   + KN H    +   + +
Sbjct: 817 NTLIHGLCHVG--RLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAI 874

Query: 102 VSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLING 161
               L  D L  NI I+       G+C    ++ A  LF N+ + G++PDV TY  +I+G
Sbjct: 875 EGSNLDADILVYNIAID-------GMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHG 927

Query: 162 FCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
            C+ G L  A +L +KM   D  +   S  N
Sbjct: 928 LCKRGLLDEANKLFRKMDENDIWSNSTSSRN 958


>gi|297849642|ref|XP_002892702.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297338544|gb|EFH68961.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 667

 Score =  377 bits (967), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 199/540 (36%), Positives = 314/540 (58%), Gaps = 38/540 (7%)

Query: 47  ENCKSGIINLNE--ARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSI 104
           E  +SGI+++ E  A   F  M   +P P +  F+  F  VA  + ++ V+ F +K+   
Sbjct: 35  ERLRSGIVDIKEDDAIDLFQEMIRSRPLPSLVDFSRFFSGVASTKQFNLVLDFCKKMELN 94

Query: 105 GLLPDFLTLNILINCF-------------GNKER---------------GLCVENRIKEA 136
           G+  +  TLNI+INCF             G   +               GLC+E+++ EA
Sbjct: 95  GIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLESKVSEA 154

Query: 137 TWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSY 196
             L   M+  G +P+V+TY +++NG C++G+ S+AL L +KM   D  N    K ++F+Y
Sbjct: 155 VVLVARMVENGCQPNVVTYNSIVNGICKSGDTSLALDLLRKM---DERN---VKADVFTY 208

Query: 197 SIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLD 256
           S IIDSLC++G +D A  LF EM+ +GI  ++V   +L+ G C AG W +   L  +M  
Sbjct: 209 STIIDSLCRDGCIDAAISLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTS 268

Query: 257 LGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDT 316
               PN++TFNV+ID   K GK+ EAN L + MI +G++P+  TYNSLMDGYC+  R+  
Sbjct: 269 RKIIPNVITFNVLIDVFVKEGKLQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLSE 328

Query: 317 AREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLS 376
           A  +   M    C   +V++  LI GYCK+  V+E M L+R+I   G+    +TY+ L+ 
Sbjct: 329 ANNMLDLMVRNNCSPDIVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQ 388

Query: 377 GLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEF 436
           G  Q+G+   A++LF EM    V PD+ TY IL+DGLC N  +++A+++F  L+ +K   
Sbjct: 389 GFCQSGKLEIAEELFQEMVSLGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMNL 448

Query: 437 GIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFL 496
            I ++  +I+G+CK G++++AW LF  LP KG+ P V+TY++MI GLC+KG L +AN  L
Sbjct: 449 DIVMYTIIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILL 508

Query: 497 LYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLA 556
             ME++G  PN  T+NTL+   L++   +   +L+ +M         D ++  +V+D+L+
Sbjct: 509 RKMEEDGNEPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSC--GFSADASSIKMVIDMLS 566



 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 137/445 (30%), Positives = 226/445 (50%), Gaps = 8/445 (1%)

Query: 119 CFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKM 178
           C+G + R   V+ +  +A  LF+ MI     P ++ +    +G   T   ++ L   KKM
Sbjct: 32  CYGERLRSGIVDIKEDDAIDLFQEMIRSRPLPSLVDFSRFFSGVASTKQFNLVLDFCKKM 91

Query: 179 VSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGF 238
                 NG+    NI++ +I+I+  C+      A  +  ++   G  P      TLI+G 
Sbjct: 92  ----ELNGIAH--NIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGL 145

Query: 239 CCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDR 298
           C      E   L   M++ G +PN++T+N +++ +CK G  + A  LL  M +R +  D 
Sbjct: 146 CLESKVSEAVVLVARMVENGCQPNVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADV 205

Query: 299 FTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQ 358
           FTY++++D  C  G ID A  +F  M +KG K ++V+YN L+ G CK     + + L + 
Sbjct: 206 FTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKD 265

Query: 359 IISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNC 418
           + S  +   VIT+N L+    + G+   A +L+ EM    + P+  TYN L+DG C  N 
Sbjct: 266 MTSRKIIPNVITFNVLIDVFVKEGKLQEANELYKEMITKGISPNTITYNSLMDGYCMQNR 325

Query: 419 VQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSI 478
           + EA  +  ++  N     I  F  LI G CK  R+D   +LF K+ ++GLV   VTYSI
Sbjct: 326 LSEANNMLDLMVRNNCSPDIVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSI 385

Query: 479 MIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPE 538
           ++ G C+ GKLE A +    M   G  P+V+T+  L+ G   N K  K +E+   + + +
Sbjct: 386 LVQGFCQSGKLEIAEELFQEMVSLGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSK 445

Query: 539 RNLVPDDTTFSIVVDLLAKDEKYHE 563
            NL  D   ++I+++ + K  K  +
Sbjct: 446 MNL--DIVMYTIIIEGMCKGGKVED 468



 Score =  115 bits (289), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 70/277 (25%), Positives = 137/277 (49%), Gaps = 2/277 (0%)

Query: 293 GLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEA 352
           G++  R  Y   +    +  + D A ++F  M       ++V ++   +G          
Sbjct: 25  GISDGRVCYGERLRSGIVDIKEDDAIDLFQEMIRSRPLPSLVDFSRFFSGVASTKQFNLV 84

Query: 353 MSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDG 412
           +   +++  NG+   + T N +++   +  +  +A  +  ++     EPD +T+N LI+G
Sbjct: 85  LDFCKKMELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLING 144

Query: 413 LCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPT 472
           LC  + V EAV L   +  N  +  +  +N +++G+CK+G    A +L  K+ ++ +   
Sbjct: 145 LCLESKVSEAVVLVARMVENGCQPNVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKAD 204

Query: 473 VVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLH 532
           V TYS +I  LCR G ++ A      ME  G   ++VT+N+L+ G  +  K +  V+LL 
Sbjct: 205 VFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLK 264

Query: 533 KMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSK 569
            M    R ++P+  TF++++D+  K+ K  E + + K
Sbjct: 265 DMT--SRKIIPNVITFNVLIDVFVKEGKLQEANELYK 299


>gi|357518651|ref|XP_003629614.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355523636|gb|AET04090.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 592

 Score =  375 bits (963), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 207/558 (37%), Positives = 312/558 (55%), Gaps = 38/558 (6%)

Query: 36  SPETQLNEFLHENCKSGII-NLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAV 94
           S +TQ   F+   CKSG + +++EA  FF  M  M P P +  F LL G + K +HY   
Sbjct: 35  SNKTQFLNFMRNQCKSGKLKSIDEALNFFHTMAKMNPLPSVIDFTLLLGFIVKMKHYTTA 94

Query: 95  ISFYRKL-VSIGLLPDFLTLNILINCFGNKE----------------------------R 125
           IS  +++  S+G+ PD   LN++IN   + +                             
Sbjct: 95  ISLVKEMHSSLGIKPDTFILNVVINSLCHLKLVAFGFSVLGTMLKLGLEPSVVTFTILIN 154

Query: 126 GLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYEN 185
           GLCV+  +  A  L  ++   G R DV TYG LING C+ G  S A+   +KM   ++  
Sbjct: 155 GLCVKGDVGRAVELVDHVEKTGYRSDVKTYGVLINGLCKMGKTSEAVGWLRKMEERNW-- 212

Query: 186 GLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWE 245
                 N+  YS ++D LCK+GLV +A  L LEM G+GI P +V  T LI G C  G W+
Sbjct: 213 ----NPNVVVYSTVMDGLCKDGLVSEALGLCLEMSGKGIKPNLVTYTCLIQGLCNFGRWK 268

Query: 246 EVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLM 305
           E   L  EM+ +G  P+L + N+++D LCK GKI +A  ++  MI  G  PD FTYNSL+
Sbjct: 269 EAGSLLDEMMKMGVMPDLQSLNILVDVLCKEGKIMQAKSVIGFMILVGEVPDVFTYNSLI 328

Query: 306 DGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVR 365
           D YCL  ++D A  +F  M S+GC   +V+Y  LI+G+CKI N+ +AM L  ++I  G  
Sbjct: 329 DRYCLQNQMDEATRVFELMVSRGCLPDIVAYTSLIHGWCKIKNINKAMHLLDEMIKVGFT 388

Query: 366 QTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKL 425
             V+T+ TL+ G  Q G+   A++LF  M  Y   P+L T  I++DGLCK+  + EA+ L
Sbjct: 389 PDVVTWTTLIGGFCQVGRPLAAKELFLNMHKYGQVPNLQTCAIILDGLCKSQLLSEALSL 448

Query: 426 FHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCR 485
           FH +E +  +  I I++ ++DG+C AG+L+ A ELF  LP KGL   V  Y+IMI+G  +
Sbjct: 449 FHAMEKSNLDLNIVIYSIILDGMCSAGKLNTALELFSCLPAKGLQINVYAYTIMINGFAK 508

Query: 486 KGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDD 545
           +G L+KA D L  ME+NGC P+  T+N  + G +   + ++ ++ L  M   ++    D 
Sbjct: 509 QGLLDKAEDLLSNMEENGCMPDSCTYNVFVQGLVAEREIARSIKYLTMMR--DKGFSVDA 566

Query: 546 TTFSIVVDLLAKDEKYHE 563
           TT  ++++ L+ ++  +E
Sbjct: 567 TTTEMIINYLSTNQGDNE 584



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 77/282 (27%), Positives = 136/282 (48%), Gaps = 8/282 (2%)

Query: 290 IQRGLNPDRFTYNSLMDGYCLVGR---IDTAREIFLSMHSKGCKHTVVSYNILINGYCKI 346
           IQ   N  +F   + M   C  G+   ID A   F +M       +V+ + +L+    K+
Sbjct: 31  IQSHSNKTQFL--NFMRNQCKSGKLKSIDEALNFFHTMAKMNPLPSVIDFTLLLGFIVKM 88

Query: 347 LNVEEAMSLYRQIISN-GVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLST 405
            +   A+SL +++ S+ G++      N +++ L       +   +   M    +EP + T
Sbjct: 89  KHYTTAISLVKEMHSSLGIKPDTFILNVVINSLCHLKLVAFGFSVLGTMLKLGLEPSVVT 148

Query: 406 YNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLP 465
           + ILI+GLC    V  AV+L   +E   +   ++ +  LI+GLCK G+   A     K+ 
Sbjct: 149 FTILINGLCVKGDVGRAVELVDHVEKTGYRSDVKTYGVLINGLCKMGKTSEAVGWLRKME 208

Query: 466 QKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTS 525
           ++   P VV YS ++ GLC+ G + +A    L M   G  PN+VT+  L+ G     +  
Sbjct: 209 ERNWNPNVVVYSTVMDGLCKDGLVSEALGLCLEMSGKGIKPNLVTYTCLIQGLCNFGRWK 268

Query: 526 KVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAV 567
           +   LL +M +    ++PD  + +I+VD+L K+ K  +  +V
Sbjct: 269 EAGSLLDEMMK--MGVMPDLQSLNILVDVLCKEGKIMQAKSV 308


>gi|224145304|ref|XP_002336216.1| predicted protein [Populus trichocarpa]
 gi|222832672|gb|EEE71149.1| predicted protein [Populus trichocarpa]
          Length = 616

 Score =  374 bits (959), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 202/531 (38%), Positives = 304/531 (57%), Gaps = 37/531 (6%)

Query: 46  HENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHY-DAVISFYRKLVSI 104
           H+N  S   N+++A  +F +M H +P P I  FN L  A+ K RHY DAVIS  +++   
Sbjct: 92  HQNDASSFRNIDDALAYFNHMLHRKPRPCIIQFNKLLSAIVKMRHYHDAVISLSKQMELA 151

Query: 105 GLLPDFLTLNILINCFGNKER----------------------------GLCVENRIKEA 136
           GL PD  TL++LINCF   +R                            GLC   +  +A
Sbjct: 152 GLSPDTYTLHMLINCFFQLQRVDLGFSVLAKIIKLGLQLTIVTFNTLINGLCKVGKFGQA 211

Query: 137 TWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSY 196
             LF +M+A G +PDV TY T+ING C+ G    A  L +KM           + ++ +Y
Sbjct: 212 VELFDDMVARGYQPDVHTYTTIINGLCKIGETVAAAGLFRKMGEAG------CQPDVVTY 265

Query: 197 SIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLD 256
           S IIDSLCK+  V++A ++F  MK +GI+P +    +LI G C    W E + +  EM+ 
Sbjct: 266 STIIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMS 325

Query: 257 LGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDT 316
           L   PN++TF+++I+  CK G + EA G+L+ M + G+ P+  TY+SLM+GY L   +  
Sbjct: 326 LNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVE 385

Query: 317 AREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLS 376
           AR++F  M +KGCK  V SYNILINGYCK   + EA  L+ ++I  G+   +++YNTL+ 
Sbjct: 386 ARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLID 445

Query: 377 GLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEF 436
           GL Q G+   A  LF  M      PDL TY+IL+DG CK   + +A +LF  ++    + 
Sbjct: 446 GLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKP 505

Query: 437 GIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFL 496
            + ++N LID +CK+  L  A +LF +L  +GL P V  Y+ +I+GLC++G L++A +  
Sbjct: 506 NMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQPNVQIYTTIINGLCKEGLLDEALEAF 565

Query: 497 LYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTT 547
             ME++GC PN  ++N ++ GFLQ+   S+ V+L+ +M   E+  V D  T
Sbjct: 566 RNMEEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMR--EKGFVADVAT 614



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 71/258 (27%), Positives = 135/258 (52%), Gaps = 3/258 (1%)

Query: 314 IDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEA-MSLYRQIISNGVRQTVITYN 372
           ID A   F  M  +  +  ++ +N L++   K+ +  +A +SL +Q+   G+     T +
Sbjct: 102 IDDALAYFNHMLHRKPRPCIIQFNKLLSAIVKMRHYHDAVISLSKQMELAGLSPDTYTLH 161

Query: 373 TLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMN 432
            L++  FQ  +      +  ++    ++  + T+N LI+GLCK     +AV+LF  +   
Sbjct: 162 MLINCFFQLQRVDLGFSVLAKIIKLGLQLTIVTFNTLINGLCKVGKFGQAVELFDDMVAR 221

Query: 433 KFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKA 492
            ++  +  +  +I+GLCK G    A  LF K+ + G  P VVTYS +I  LC+  ++ +A
Sbjct: 222 GYQPDVHTYTTIINGLCKIGETVAAAGLFRKMGEAGCQPDVVTYSTIIDSLCKDRRVNEA 281

Query: 493 NDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVV 552
            D   YM+  G +PN+ T+N+L+ G    ++  +   +L++M     N++P+  TFS+++
Sbjct: 282 LDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMS--LNIMPNIVTFSLLI 339

Query: 553 DLLAKDEKYHECSAVSKS 570
           ++  K+    E   V K+
Sbjct: 340 NIFCKEGNVFEARGVLKT 357


>gi|22128589|gb|AAM52340.1| fertility restorer-like protein [Petunia x hybrida]
          Length = 591

 Score =  373 bits (957), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 203/546 (37%), Positives = 313/546 (57%), Gaps = 43/546 (7%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
           NEF +  C      L++A   F  M   +P P ++SF+ L  A+   +HY +V+S +R++
Sbjct: 45  NEFQNVKC------LDDAFSLFRQMVRTKPLPSVASFSKLLKAMVHMKHYSSVVSLFREI 98

Query: 102 VSIGLLPDFLTLNILIN----------------------------CFGNKERGLCVENRI 133
             + +      L+I++N                             F    RGL  EN++
Sbjct: 99  HKLRIPVHEFILSIVVNSCCLMHRTDLGFSVLAIHFKKGIPYNEVTFTTLIRGLFAENKV 158

Query: 134 KEATWLFKNMIAFGV-RPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
           K+A  LFK ++   +  P+ + YGT++NG C+ G+   A  L + M  G       +K N
Sbjct: 159 KDAVHLFKKLVRENICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGS------TKPN 212

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
             +Y+I+ID+ CK+G++D A  L  EMK + I P +   +TLI   C    WE V  LF+
Sbjct: 213 TRTYTIVIDAFCKDGMLDGATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFL 272

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
           EM+ L   PN+ TFN +ID LCK GK+ +A  ++  MI++G++PD  TYN ++DGY L G
Sbjct: 273 EMIHLNIYPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRG 332

Query: 313 RIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYN 372
           ++D AREIF SM +K  +  ++SYNILINGY +   ++EAM + R+I   G++ +++T N
Sbjct: 333 QVDRAREIFDSMINKSIEPDIISYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCN 392

Query: 373 TLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMN 432
            LL GLF+ G+   AQ  FDEM      PDL T+  L+ G  KN  V+EA+  FH LE  
Sbjct: 393 VLLHGLFELGRTKSAQNFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERR 452

Query: 433 KFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKA 492
           + +  I+I+  +IDGLCK G+LD A   F KLP  GL P V+TY+ MI G C++G L++A
Sbjct: 453 REDTNIQIYTAVIDGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEA 512

Query: 493 NDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVV 552
            D L  ME NGC  +  T+N ++ GFL++NK S++   L ++A   ++   +  T  +++
Sbjct: 513 KDMLRKMEDNGCLADNRTYNVIVRGFLRSNKVSEMKAFLEEIA--GKSFSFEAATVELLM 570

Query: 553 DLLAKD 558
           D++A+D
Sbjct: 571 DIIAED 576



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 62/265 (23%), Positives = 113/265 (42%), Gaps = 38/265 (14%)

Query: 341 NGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNV- 399
           N +  +  +++A SL+RQ++      +V +++ LL  +           LF E+    + 
Sbjct: 45  NEFQNVKCLDDAFSLFRQMVRTKPLPSVASFSKLLKAMVHMKHYSSVVSLFREIHKLRIP 104

Query: 400 -----------------EPDLS-----------------TYNILIDGLCKNNCVQEAVKL 425
                              DL                  T+  LI GL   N V++AV L
Sbjct: 105 VHEFILSIVVNSCCLMHRTDLGFSVLAIHFKKGIPYNEVTFTTLIRGLFAENKVKDAVHL 164

Query: 426 FH-MLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLC 484
           F  ++  N  E    ++  +++GLCK G    A++L   + Q    P   TY+I+I   C
Sbjct: 165 FKKLVRENICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTRTYTIVIDAFC 224

Query: 485 RKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPD 544
           + G L+ A   L  M++    P++ T++TL+    + ++   V  L  +M     N+ P+
Sbjct: 225 KDGMLDGATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIH--LNIYPN 282

Query: 545 DTTFSIVVDLLAKDEKYHECSAVSK 569
             TF+ V+D L K+ K  +   + +
Sbjct: 283 VCTFNSVIDGLCKEGKVEDAEEIMR 307



 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 58/265 (21%), Positives = 112/265 (42%), Gaps = 36/265 (13%)

Query: 55  NLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLN 114
            ++ AR  F  M +    P I S+N+L    A+ +  D  +   R++   GL P  +T N
Sbjct: 333 QVDRAREIFDSMINKSIEPDIISYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCN 392

Query: 115 ILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVAL-- 172
           +L++       GL    R K A   F  M++ G  PD+ T+ TL+ G+ + G +  A+  
Sbjct: 393 VLLH-------GLFELGRTKSAQNFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSH 445

Query: 173 -------------RLHKKMVSGDYENGLISKT--------------NIFSYSIIIDSLCK 205
                        +++  ++ G  +NG + K               ++ +Y+ +I   C+
Sbjct: 446 FHKLERRREDTNIQIYTAVIDGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQ 505

Query: 206 EGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLT 265
           EGL+D+AK++  +M+  G          ++ GF  +    E+     E+          T
Sbjct: 506 EGLLDEAKDMLRKMEDNGCLADNRTYNVIVRGFLRSNKVSEMKAFLEEIAGKSFSFEAAT 565

Query: 266 FNVMIDCLCKGGKINEANGLLELMI 290
             +++D + +   I      ++L I
Sbjct: 566 VELLMDIIAEDPSITRKMHWIKLHI 590


>gi|359488007|ref|XP_002263892.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Vitis vinifera]
          Length = 539

 Score =  372 bits (955), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 194/503 (38%), Positives = 298/503 (59%), Gaps = 15/503 (2%)

Query: 56  LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNI 115
           L++A   F  M HM P PPI  F  L  ++AK +HY  V+S  +K+ S G+ PD  TL I
Sbjct: 37  LDDALSSFHRMLHMHPPPPIFEFAKLLTSIAKMKHYSTVLSLSKKMDSFGIPPDVYTLTI 96

Query: 116 LINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLH 175
           +IN F       C  NR+  A  +   ++  G +PD  T+ TL+ G C  G +  AL + 
Sbjct: 97  VINSF-------CHLNRVDFALSVLAKILKLGHQPDTATFTTLVRGLCVVGKIGEALDVF 149

Query: 176 KKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLI 235
            KMV   ++       N+ +Y  +++ LCK+  + +A  LF EM  +GI+P +    +LI
Sbjct: 150 DKMVGEGFQ------PNVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGISPDIFTYNSLI 203

Query: 236 HGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLN 295
           H  C    W+ V  L  EM+     PN+++ N+++D LCK GK+ EA+ ++++MIQ G+ 
Sbjct: 204 HALCNLCEWKHVTTLLNEMVKSKIMPNVVSLNIVVDALCKEGKVTEAHDVVDMMIQGGVE 263

Query: 296 PDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSL 355
           PD  TY +LMDG+CL   +D A ++F  M   GC   VVSYN LINGYCKI  +++AM L
Sbjct: 264 PDVVTYAALMDGHCLRSEMDEAVKVFDMMVRNGCVCNVVSYNTLINGYCKIQRIDKAMYL 323

Query: 356 YRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCK 415
           + ++    +    +TY+TL+ GL   G+   A  LF+EM      P+L TY+IL+D LCK
Sbjct: 324 FEEMCRQELIPNTMTYSTLIHGLCHVGRLQDAIALFNEMVACGQIPNLVTYSILLDYLCK 383

Query: 416 NNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVT 475
           N+ + EA+ L   +E +  +  ++++N  IDG+C+AG L+ A +LF  L  +GL P V T
Sbjct: 384 NHRLAEAMALLKAIEGSNLDPDVQVYNIAIDGMCRAGDLEAARDLFSNLAPRGLQPDVWT 443

Query: 476 YSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMA 535
           ++IMI GLC++G L++A+     M++NGC  N  T+NT+  G LQNNKTS+ ++LL +M 
Sbjct: 444 HNIMIRGLCKRGLLDEASKLFREMDENGCLRNGCTYNTITQGLLQNNKTSRAIQLLEEML 503

Query: 536 EPERNLVPDDTTFSIVVDLLAKD 558
              R    D +T +++V +L+ D
Sbjct: 504 --ARGFSADVSTTALLVKMLSDD 524



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 120/372 (32%), Positives = 197/372 (52%), Gaps = 13/372 (3%)

Query: 55  NLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLN 114
            L EA   F  M     SP I ++N L  A+     +  V +   ++V   ++P+ ++LN
Sbjct: 176 QLTEALNLFSEMIAKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVKSKIMPNVVSLN 235

Query: 115 ILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRL 174
           I+++        LC E ++ EA  +   MI  GV PDV+TY  L++G C    +  A+++
Sbjct: 236 IVVD-------ALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALMDGHCLRSEMDEAVKV 288

Query: 175 HKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTL 234
              MV     NG +   N+ SY+ +I+  CK   +DKA  LF EM  + + P  +  +TL
Sbjct: 289 FDMMV----RNGCVC--NVVSYNTLINGYCKIQRIDKAMYLFEEMCRQELIPNTMTYSTL 342

Query: 235 IHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGL 294
           IHG C  G  ++   LF EM+  G  PNL+T+++++D LCK  ++ EA  LL+ +    L
Sbjct: 343 IHGLCHVGRLQDAIALFNEMVACGQIPNLVTYSILLDYLCKNHRLAEAMALLKAIEGSNL 402

Query: 295 NPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMS 354
           +PD   YN  +DG C  G ++ AR++F ++  +G +  V ++NI+I G CK   ++EA  
Sbjct: 403 DPDVQVYNIAIDGMCRAGDLEAARDLFSNLAPRGLQPDVWTHNIMIRGLCKRGLLDEASK 462

Query: 355 LYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLC 414
           L+R++  NG  +   TYNT+  GL Q  +   A +L +EM       D+ST  +L+  L 
Sbjct: 463 LFREMDENGCLRNGCTYNTITQGLLQNNKTSRAIQLLEEMLARGFSADVSTTALLVKMLS 522

Query: 415 KNNCVQEAVKLF 426
            +   Q   ++ 
Sbjct: 523 DDGLDQSVKQIL 534



 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 105/382 (27%), Positives = 194/382 (50%), Gaps = 8/382 (2%)

Query: 189 SKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVN 248
           S+ N  S S+  ++L      D A   F  M      P +     L+       ++  V 
Sbjct: 23  SQNNFQSKSLHFNTL------DDALSSFHRMLHMHPPPPIFEFAKLLTSIAKMKHYSTVL 76

Query: 249 GLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGY 308
            L  +M   G  P++ T  ++I+  C   +++ A  +L  +++ G  PD  T+ +L+ G 
Sbjct: 77  SLSKKMDSFGIPPDVYTLTIVINSFCHLNRVDFALSVLAKILKLGHQPDTATFTTLVRGL 136

Query: 309 CLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTV 368
           C+VG+I  A ++F  M  +G +  VV+Y  L+NG CK   + EA++L+ ++I+ G+   +
Sbjct: 137 CVVGKIGEALDVFDKMVGEGFQPNVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGISPDI 196

Query: 369 ITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHM 428
            TYN+L+  L    +  +   L +EM    + P++ + NI++D LCK   V EA  +  M
Sbjct: 197 FTYNSLIHALCNLCEWKHVTTLLNEMVKSKIMPNVVSLNIVVDALCKEGKVTEAHDVVDM 256

Query: 429 LEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGK 488
           +     E  +  +  L+DG C    +D A ++F  + + G V  VV+Y+ +I+G C+  +
Sbjct: 257 MIQGGVEPDVVTYAALMDGHCLRSEMDEAVKVFDMMVRNGCVCNVVSYNTLINGYCKIQR 316

Query: 489 LEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTF 548
           ++KA      M +    PN +T++TL+HG     +    + L ++M    +  +P+  T+
Sbjct: 317 IDKAMYLFEEMCRQELIPNTMTYSTLIHGLCHVGRLQDAIALFNEMVACGQ--IPNLVTY 374

Query: 549 SIVVDLLAKDEKYHECSAVSKS 570
           SI++D L K+ +  E  A+ K+
Sbjct: 375 SILLDYLCKNHRLAEAMALLKA 396


>gi|22128591|gb|AAM52341.1| fertility restorer-like protein [Petunia x hybrida]
          Length = 592

 Score =  370 bits (951), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 204/546 (37%), Positives = 311/546 (56%), Gaps = 43/546 (7%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
           NEF +  C      L++A   F  M   +P P + SF+ L  A+   +HY +V+S +R++
Sbjct: 45  NEFENVKC------LDDAFSLFRQMVRTKPLPSVVSFSKLLKALVHMKHYSSVVSLFREI 98

Query: 102 VSIGLLPDFLTLNILINC----------------------------FGNKERGLCVENRI 133
             + +      L+I++N                             F    RGL  EN++
Sbjct: 99  HKLRIPVHEFILSIVVNSCCLMHRTDLGFSVLAIHFKKGIPFNQVIFNTLLRGLFAENKV 158

Query: 134 KEATWLFKNMIAFGV-RPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
           K+A  LFK ++   +  P+ + YGT++NG C+ G+   A  L + M  G       +K N
Sbjct: 159 KDAVHLFKKLVRENICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGS------TKPN 212

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
              YSI+ID+ CK+G++D A  L  EMK + I P +   +TLI   C    WE V  LF+
Sbjct: 213 TCIYSIVIDAFCKDGMLDGATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFL 272

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
           EM+ L   PN+ TFN +ID LCK GK+ +A  ++  MI++G++PD  TYN ++DGY L G
Sbjct: 273 EMIHLNIYPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRG 332

Query: 313 RIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYN 372
           ++D AREIF SM +K  +  ++SYNILINGY +   ++EAM + R+I   G++ +++T N
Sbjct: 333 QVDRAREIFDSMINKSIEPNIISYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCN 392

Query: 373 TLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMN 432
            LL GLF+ G+   AQ  FDEM      PDL T+  L+ G  KN  V+EA+  FH LE  
Sbjct: 393 VLLHGLFELGRTKSAQNFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERR 452

Query: 433 KFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKA 492
           + +  I+I+  +IDGLCK G+LD A   F KLP  GL P V+TY+ MI G C++G L++A
Sbjct: 453 REDTNIQIYTAVIDGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEA 512

Query: 493 NDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVV 552
            D L  ME NGC  +  T+N ++ GFL++NK S++   L ++A   ++   +  T  +++
Sbjct: 513 KDMLRKMEDNGCLADNRTYNVIVRGFLRSNKVSEMKAFLEEIA--GKSFSFEAATVELLM 570

Query: 553 DLLAKD 558
           D++A+D
Sbjct: 571 DIIAED 576



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 61/257 (23%), Positives = 110/257 (42%), Gaps = 38/257 (14%)

Query: 349 VEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNV--------- 399
           +++A SL+RQ++      +V++++ LL  L           LF E+    +         
Sbjct: 53  LDDAFSLFRQMVRTKPLPSVVSFSKLLKALVHMKHYSSVVSLFREIHKLRIPVHEFILSI 112

Query: 400 ---------EPDLS-----------------TYNILIDGLCKNNCVQEAVKLFH-MLEMN 432
                      DL                   +N L+ GL   N V++AV LF  ++  N
Sbjct: 113 VVNSCCLMHRTDLGFSVLAIHFKKGIPFNQVIFNTLLRGLFAENKVKDAVHLFKKLVREN 172

Query: 433 KFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKA 492
             E    ++  +++GLCK G    A++L   + Q    P    YSI+I   C+ G L+ A
Sbjct: 173 ICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTCIYSIVIDAFCKDGMLDGA 232

Query: 493 NDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVV 552
              L  M++    P++ T++TL+    + ++   V  L  +M     N+ P+  TF+ V+
Sbjct: 233 TSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIH--LNIYPNVCTFNSVI 290

Query: 553 DLLAKDEKYHECSAVSK 569
           D L K+ K  +   + +
Sbjct: 291 DGLCKEGKVEDAEEIMR 307


>gi|8778650|gb|AAF79658.1|AC025416_32 F5O11.4 [Arabidopsis thaliana]
          Length = 975

 Score =  369 bits (946), Expect = 4e-99,   Method: Compositional matrix adjust.
 Identities = 207/584 (35%), Positives = 317/584 (54%), Gaps = 66/584 (11%)

Query: 46  HENCKSGIINL--NEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVS 103
            E  +SG++++  ++A   F  M H +P P +  F+ LF A+AK + YD V++  +++  
Sbjct: 155 RERLRSGLVDIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMEL 214

Query: 104 IGLLPDFLTLNILINCFGNKER----------------------------GLCVENRIKE 135
            G+  +  TL+I+INCF    +                            GLC+E R+ E
Sbjct: 215 KGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSE 274

Query: 136 ATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLIS------ 189
           A  L   M+  G +PD+IT  TL+NG C +G  + A+ L  KMV    +   ++      
Sbjct: 275 ALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLN 334

Query: 190 -----------------------KTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINP 226
                                  K +   YSIIID LCK G +D A  LF EM+ +GI  
Sbjct: 335 VMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITT 394

Query: 227 AVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLL 286
            ++    LI GFC AG W++   L  +M+     PN++TF+V+ID   K GK+ EA  L 
Sbjct: 395 NIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELH 454

Query: 287 ELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKI 346
           + MI RG+ PD  TY SL+DG+C    +D A ++   M SKGC   + ++NILINGYCK 
Sbjct: 455 KEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKA 514

Query: 347 LNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTY 406
             +++ + L+R++   GV    +TYNTL+ G  + G+   A++LF EM    V P++ TY
Sbjct: 515 NRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTY 574

Query: 407 NILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQ 466
            IL+DGLC N   ++A+++F  +E +K E  I I+N +I G+C A ++D+AW+LF  LP 
Sbjct: 575 KILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPL 634

Query: 467 KGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSK 526
           KG+ P V TY+IMI GLC+KG L +A      ME++G AP+  T+N L+   L +   +K
Sbjct: 635 KGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATK 694

Query: 527 VVELLHKMAEPERNLVPDDTTFSIVVDLLAKDE-----KYHECS 565
            V+L+ ++         D +T  +V+D+L+ D+     KYH CS
Sbjct: 695 SVKLIEELKRC--GFSVDASTIKMVIDMLSDDKANYFSKYHNCS 736


>gi|356528294|ref|XP_003532739.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 594

 Score =  367 bits (943), Expect = 8e-99,   Method: Compositional matrix adjust.
 Identities = 201/541 (37%), Positives = 298/541 (55%), Gaps = 38/541 (7%)

Query: 49  CKSGII-NLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLV-SIGL 106
           CKSG + N++EA   F  M  M+P P +  F LL G + + +HY   IS  + +  S+G+
Sbjct: 49  CKSGKVKNIDEALDLFQGMASMKPLPSVKDFTLLLGVIVRLKHYTTAISLVKHIFSSLGI 108

Query: 107 LPDFLTLNILINCFGNKE----------------------------RGLCVENRIKEATW 138
             D +TLNI+INC    +                             GLCV+  + +A  
Sbjct: 109 EADTITLNIVINCLCRLKLVAFGFSVLGTMFKLGLEPTVMTLTALINGLCVQGNVAQAVG 168

Query: 139 LFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSI 198
           L  +M       DV TYG LING C+TG+   A+   +KM   ++      K N+  YS 
Sbjct: 169 LVDHMEKMRYPLDVYTYGVLINGLCKTGDTLAAVEWLRKMEERNW------KPNVVVYST 222

Query: 199 IIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLG 258
           I+D LCK+GLV +A  L  EM G+G+ P +V    LI G C  G W+E   L  EM+ +G
Sbjct: 223 IMDGLCKDGLVSEALNLCSEMSGKGVRPNLVTYACLIQGLCNFGRWKETGSLLDEMIKMG 282

Query: 259 PRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAR 318
            R +L T N+++D  CK GK+ +A  ++  MI  G  PD FTYNSL+  YCL  +++ A 
Sbjct: 283 MRLDLQTLNILVDAFCKEGKVMQAKSVIGFMILTGEGPDVFTYNSLIHIYCLQNKMNEAM 342

Query: 319 EIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGL 378
            +F  M S+GC   +V +  LI+G+CK  N+ + M L  ++   G    V+T+ TL+ G 
Sbjct: 343 RVFHLMVSRGCLPDIVVFTSLIHGWCKDKNINKVMHLLEEMAKMGFVPDVVTWTTLIGGF 402

Query: 379 FQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGI 438
            QAG+   A++LF  M  Y   P+L T  +++DGLCK N + EAV L   +E +  +  I
Sbjct: 403 CQAGRPLAAKELFLNMHKYGQVPNLQTCAVILDGLCKGNLLSEAVSLAEAMEKSNLDLNI 462

Query: 439 EIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLY 498
            I++ L+DG+C AG+L+ AWELF  LP KGL   V TY+IMI GLC++G L+KA D L+ 
Sbjct: 463 VIYSILLDGMCSAGKLNAAWELFSSLPGKGLQINVYTYTIMIKGLCKQGSLDKAEDLLIN 522

Query: 499 MEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKD 558
           ME+NGC P+  T+N  + G L   + ++ ++ L  M   ++    D  T  I ++ L+ +
Sbjct: 523 MEENGCLPDNCTYNVFVQGLLTKKEIARSIKYLTIMR--DKGFSVDAATTEITINYLSTN 580

Query: 559 E 559
           E
Sbjct: 581 E 581



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 129/432 (29%), Positives = 206/432 (47%), Gaps = 10/432 (2%)

Query: 125 RGLCVENRIK---EATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSG 181
           R LC   ++K   EA  LF+ M +    P V  +  L+    R  + + A+ L K + S 
Sbjct: 46  RNLCKSGKVKNIDEALDLFQGMASMKPLPSVKDFTLLLGVIVRLKHYTTAISLVKHIFSS 105

Query: 182 DYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCA 241
                L  + +  + +I+I+ LC+  LV     +   M   G+ P V+  T LI+G C  
Sbjct: 106 -----LGIEADTITLNIVINCLCRLKLVAFGFSVLGTMFKLGLEPTVMTLTALINGLCVQ 160

Query: 242 GNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTY 301
           GN  +  GL   M  +    ++ T+ V+I+ LCK G    A   L  M +R   P+   Y
Sbjct: 161 GNVAQAVGLVDHMEKMRYPLDVYTYGVLINGLCKTGDTLAAVEWLRKMEERNWKPNVVVY 220

Query: 302 NSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIIS 361
           +++MDG C  G +  A  +   M  KG +  +V+Y  LI G C     +E  SL  ++I 
Sbjct: 221 STIMDGLCKDGLVSEALNLCSEMSGKGVRPNLVTYACLIQGLCNFGRWKETGSLLDEMIK 280

Query: 362 NGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQE 421
            G+R  + T N L+    + G+   A+ +   M L    PD+ TYN LI   C  N + E
Sbjct: 281 MGMRLDLQTLNILVDAFCKEGKVMQAKSVIGFMILTGEGPDVFTYNSLIHIYCLQNKMNE 340

Query: 422 AVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIH 481
           A+++FH++        I +F  LI G CK   ++    L  ++ + G VP VVT++ +I 
Sbjct: 341 AMRVFHLMVSRGCLPDIVVFTSLIHGWCKDKNINKVMHLLEEMAKMGFVPDVVTWTTLIG 400

Query: 482 GLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNL 541
           G C+ G+   A +  L M K G  PN+ T   ++ G  + N  S+ V L   M   + NL
Sbjct: 401 GFCQAGRPLAAKELFLNMHKYGQVPNLQTCAVILDGLCKGNLLSEAVSLAEAM--EKSNL 458

Query: 542 VPDDTTFSIVVD 553
             +   +SI++D
Sbjct: 459 DLNIVIYSILLD 470



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 91/350 (26%), Positives = 155/350 (44%), Gaps = 47/350 (13%)

Query: 256 DLGPRPNLLTFNVMIDCLCKGGK---INEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
           D     N   F + +  LCK GK   I+EA  L + M      P    +  L+     + 
Sbjct: 31  DTDSHSNGTQFLISMRNLCKSGKVKNIDEALDLFQGMASMKPLPSVKDFTLLLGVIVRLK 90

Query: 313 RIDTA----REIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTV 368
              TA    + IF S+   G +   ++ NI+IN  C++  V    S+   +   G+  TV
Sbjct: 91  HYTTAISLVKHIFSSL---GIEADTITLNIVINCLCRLKLVAFGFSVLGTMFKLGLEPTV 147

Query: 369 ITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHM 428
           +T   L++GL   G    A  L D M+      D+ TY +LI+GLCK      AV+    
Sbjct: 148 MTLTALINGLCVQGNVAQAVGLVDHMEKMRYPLDVYTYGVLINGLCKTGDTLAAVEWLRK 207

Query: 429 LEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGL----- 483
           +E   ++  + +++ ++DGLCK G +  A  L  ++  KG+ P +VTY+ +I GL     
Sbjct: 208 MEERNWKPNVVVYSTIMDGLCKDGLVSEALNLCSEMSGKGVRPNLVTYACLIQGLCNFGR 267

Query: 484 ------------------------------CRKGKLEKANDFLLYMEKNGCAPNVVTFNT 513
                                         C++GK+ +A   + +M   G  P+V T+N+
Sbjct: 268 WKETGSLLDEMIKMGMRLDLQTLNILVDAFCKEGKVMQAKSVIGFMILTGEGPDVFTYNS 327

Query: 514 LMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
           L+H +   NK ++ + + H M    R  +PD   F+ ++    KD+  ++
Sbjct: 328 LIHIYCLQNKMNEAMRVFHLMV--SRGCLPDIVVFTSLIHGWCKDKNINK 375


>gi|79369396|ref|NP_176481.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806495|sp|Q9LQ14.2|PPR96_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62930, chloroplastic; Flags: Precursor
 gi|332195902|gb|AEE34023.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 629

 Score =  365 bits (936), Expect = 6e-98,   Method: Compositional matrix adjust.
 Identities = 205/565 (36%), Positives = 309/565 (54%), Gaps = 71/565 (12%)

Query: 54  INLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVIS----------------- 96
           + L++A   FG M   +P P I  FN L  A+AK   +D VIS                 
Sbjct: 59  LKLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSY 118

Query: 97  ------FYR------------KLVSIGLLPDFLTLNILINCFGNKER------------- 125
                 F R            K++ +G  PD +TL+ L+N + + +R             
Sbjct: 119 NILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFV 178

Query: 126 ---------------GLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSV 170
                          GL + N+  EA  L   M+A G +PD+ TYGT++NG C+ G++ +
Sbjct: 179 MEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDL 238

Query: 171 ALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVV 230
           AL L KKM  G  E       ++  Y+ IID+LC    V+ A  LF EM  +GI P VV 
Sbjct: 239 ALSLLKKMEKGKIE------ADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVT 292

Query: 231 CTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMI 290
             +LI   C  G W + + L  +M++    PN++TF+ +ID   K GK+ EA  L + MI
Sbjct: 293 YNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMI 352

Query: 291 QRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVE 350
           +R ++PD FTY+SL++G+C+  R+D A+ +F  M SK C   VV+YN LI G+CK   VE
Sbjct: 353 KRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVE 412

Query: 351 EAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILI 410
           E M L+R++   G+    +TYNTL+ GLFQAG    AQK+F +M    V PD+ TY+IL+
Sbjct: 413 EGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILL 472

Query: 411 DGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLV 470
           DGLCK   +++A+ +F  L+ +K E  I  +N +I+G+CKAG++++ W+LF  L  KG+ 
Sbjct: 473 DGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVK 532

Query: 471 PTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVEL 530
           P V+ Y+ MI G CRKG  E+A+     M+++G  PN  T+NTL+   L++   +   EL
Sbjct: 533 PNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAEL 592

Query: 531 LHKMAEPERNLVPDDTTFSIVVDLL 555
           + +M       V D +T S+V+++L
Sbjct: 593 IKEMRSC--GFVGDASTISMVINML 615



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 125/433 (28%), Positives = 220/433 (50%), Gaps = 8/433 (1%)

Query: 125 RGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYE 184
           R + ++ ++ +A  LF  M+     P ++ +  L++   +     + + L ++M     +
Sbjct: 53  RNVLLDLKLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERM-----Q 107

Query: 185 NGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNW 244
           N  IS  +++SY+I+I+  C+   +  A  +  +M   G  P +V  ++L++G+C     
Sbjct: 108 NLRIS-YDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRI 166

Query: 245 EEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSL 304
            E   L  +M  +  +PN +TFN +I  L    K +EA  L++ M+ RG  PD FTY ++
Sbjct: 167 SEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTV 226

Query: 305 MDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGV 364
           ++G C  G ID A  +   M     +  VV Y  +I+  C   NV +A++L+ ++ + G+
Sbjct: 227 VNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGI 286

Query: 365 RQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVK 424
           R  V+TYN+L+  L   G+   A +L  +M    + P++ T++ LID   K   + EA K
Sbjct: 287 RPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEK 346

Query: 425 LFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLC 484
           L+  +     +  I  ++ LI+G C   RLD A  +F  +  K   P VVTY+ +I G C
Sbjct: 347 LYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFC 406

Query: 485 RKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPD 544
           +  ++E+  +    M + G   N VT+NTL+ G  Q        ++  KM      + PD
Sbjct: 407 KAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSD--GVPPD 464

Query: 545 DTTFSIVVDLLAK 557
             T+SI++D L K
Sbjct: 465 IITYSILLDGLCK 477



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 88/323 (27%), Positives = 152/323 (47%), Gaps = 7/323 (2%)

Query: 264 LTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLS 323
           L+ NV++D      K+++A  L   M+Q    P    +N L+     + + D    +   
Sbjct: 51  LSRNVLLDL-----KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGER 105

Query: 324 MHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQ 383
           M +    + + SYNILIN +C+   +  A+++  +++  G    ++T ++LL+G     +
Sbjct: 106 MQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKR 165

Query: 384 AGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNC 443
              A  L D+M +   +P+  T+N LI GL  +N   EAV L   +     +  +  +  
Sbjct: 166 ISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGT 225

Query: 444 LIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNG 503
           +++GLCK G +D A  L  K+ +  +   VV Y+ +I  LC    +  A +    M+  G
Sbjct: 226 VVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKG 285

Query: 504 CAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
             PNVVT+N+L+       + S    LL  M E  R + P+  TFS ++D   K+ K  E
Sbjct: 286 IRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIE--RKINPNVVTFSALIDAFVKEGKLVE 343

Query: 564 CSAVSKSSYRACLYVTIFQPSSL 586
              +     +  +   IF  SSL
Sbjct: 344 AEKLYDEMIKRSIDPDIFTYSSL 366



 Score = 82.0 bits (201), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 66/250 (26%), Positives = 107/250 (42%), Gaps = 36/250 (14%)

Query: 56  LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNI 115
           L+EA++ F  M      P + ++N L     K +  +  +  +R++   GL+ + +T N 
Sbjct: 376 LDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNT 435

Query: 116 LINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRL- 174
           LI       +GL        A  +FK M++ GV PD+ITY  L++G C+ G L  AL + 
Sbjct: 436 LI-------QGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVF 488

Query: 175 --------------HKKMVSGDYENGLIS--------------KTNIFSYSIIIDSLCKE 206
                         +  M+ G  + G +               K N+  Y+ +I   C++
Sbjct: 489 EYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRK 548

Query: 207 GLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTF 266
           GL ++A  LF EMK  G  P      TLI      G+      L  EM   G   +  T 
Sbjct: 549 GLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTI 608

Query: 267 NVMIDCLCKG 276
           +++I+ L  G
Sbjct: 609 SMVINMLHDG 618


>gi|224123318|ref|XP_002319049.1| predicted protein [Populus trichocarpa]
 gi|222857425|gb|EEE94972.1| predicted protein [Populus trichocarpa]
          Length = 585

 Score =  364 bits (935), Expect = 6e-98,   Method: Compositional matrix adjust.
 Identities = 203/527 (38%), Positives = 298/527 (56%), Gaps = 38/527 (7%)

Query: 63  FGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINC--- 119
           F  +  ++P PP+  FN L G++ K +HY  VIS  +++    + P+  TL ILINC   
Sbjct: 57  FNQLLGIRPLPPVVVFNKLLGSLVKKKHYSTVISLCKQMDLSNIRPNVYTLTILINCLCH 116

Query: 120 ---------------------------FGNKERGLCVENRIKEATWLFKNMIAFGVRPDV 152
                                      FG    GLC + +I +A  LF  +   G  P +
Sbjct: 117 SNRDHVHFAFSALGKMFKLGLQPTHVTFGTLLNGLCSKAKIIDAVKLFDEIGKMGFAPSL 176

Query: 153 ITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKA 212
           ITY T+I G C+ G+ + AL+L KKM     E G   K ++ +Y+ +IDSLCK+   ++A
Sbjct: 177 ITYTTIIKGLCKIGHTTNALQLLKKM----EEKG--CKPDVVAYNTVIDSLCKDRRANEA 230

Query: 213 KELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDC 272
              F EM  +GI P VV  ++++HGFC  G   E   LF +M+     PN +TF +++D 
Sbjct: 231 MYFFSEMVDQGIPPNVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDG 290

Query: 273 LCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHT 332
           LCK G I EA  + E+M + G+ PD +TY++LMDGYCL  ++D A+++F  M  KG   +
Sbjct: 291 LCKEGMILEARRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPS 350

Query: 333 VVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFD 392
           V  YNILING+CK   + EA +L  ++    +    +TY+TL+ G  QAG+   AQKLF 
Sbjct: 351 VRVYNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFK 410

Query: 393 EMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAG 452
           EM  Y + PD  TY+IL+DGLCK+  + EA +L   ++ +K E  I I+N LI G+C  G
Sbjct: 411 EMCSYGLLPDSITYSILLDGLCKHGHLDEAFRLLKAMQESKIEPHICIYNILIQGMCNFG 470

Query: 453 RLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFN 512
           +L+ A ELF  L  KG+ P+VVTY++MI GL ++G   +A +    M  NGC PN  T+N
Sbjct: 471 KLEAARELFSNLFVKGIQPSVVTYTVMISGLLKEGLSNEACEMFRKMVVNGCLPNSCTYN 530

Query: 513 TLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDE 559
             + GFL+N   S  V L+ +M    R    D +TF +++DL + DE
Sbjct: 531 VAIQGFLRNGDPSNAVRLIEEMV--GRGFSADSSTFQMLLDLESNDE 575



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 140/446 (31%), Positives = 219/446 (49%), Gaps = 22/446 (4%)

Query: 148 VRPDVITYGTLINGFCRTGN--LSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCK 205
           + P  IT G    GFC   N   SVA      + S +   G+     +  ++ ++ SL K
Sbjct: 30  ISPSSITNG----GFCSNYNNLHSVA----DAVASFNQLLGIRPLPPVVVFNKLLGSLVK 81

Query: 206 EGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI---EMLDLGPRPN 262
           +        L  +M    I P V   T LI+  C   N + V+  F    +M  LG +P 
Sbjct: 82  KKHYSTVISLCKQMDLSNIRPNVYTLTILINCLC-HSNRDHVHFAFSALGKMFKLGLQPT 140

Query: 263 LLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFL 322
            +TF  +++ LC   KI +A  L + + + G  P   TY +++ G C +G    A ++  
Sbjct: 141 HVTFGTLLNGLCSKAKIIDAVKLFDEIGKMGFAPSLITYTTIIKGLCKIGHTTNALQLLK 200

Query: 323 SMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAG 382
            M  KGCK  VV+YN +I+  CK     EAM  + +++  G+   V+TY+++L G    G
Sbjct: 201 KMEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPPNVVTYSSILHGFCNLG 260

Query: 383 QAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFN 442
           Q   A  LF +M   NV P+  T+ IL+DGLCK   + EA ++F M+  N  E     ++
Sbjct: 261 QLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEARRVFEMMTENGVEPDAYTYS 320

Query: 443 CLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKN 502
            L+DG C   ++D A +LF  +  KG  P+V  Y+I+I+G C+  +L +A   L  M   
Sbjct: 321 ALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILINGHCKSRRLNEAKTLLSEMYDR 380

Query: 503 GCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAK----D 558
              P+ VT++TLM GF Q  +     +L  +M      L+PD  T+SI++D L K    D
Sbjct: 381 DLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCS--YGLLPDSITYSILLDGLCKHGHLD 438

Query: 559 EKYHECSAVSKSSYRA--CLYVTIFQ 582
           E +    A+ +S      C+Y  + Q
Sbjct: 439 EAFRLLKAMQESKIEPHICIYNILIQ 464



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 110/355 (30%), Positives = 184/355 (51%), Gaps = 13/355 (3%)

Query: 57  NEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNIL 116
           NEA YFF  M      P + +++ +          +   S +++++   ++P+ +T  IL
Sbjct: 228 NEAMYFFSEMVDQGIPPNVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTIL 287

Query: 117 INCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHK 176
           ++       GLC E  I EA  +F+ M   GV PD  TY  L++G+C    +  A +L  
Sbjct: 288 VD-------GLCKEGMILEARRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFD 340

Query: 177 KMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIH 236
            MV   +        ++  Y+I+I+  CK   +++AK L  EM  R + P  V  +TL+ 
Sbjct: 341 IMVGKGF------APSVRVYNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQ 394

Query: 237 GFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNP 296
           GFC AG  +    LF EM   G  P+ +T+++++D LCK G ++EA  LL+ M +  + P
Sbjct: 395 GFCQAGRPQVAQKLFKEMCSYGLLPDSITYSILLDGLCKHGHLDEAFRLLKAMQESKIEP 454

Query: 297 DRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLY 356
               YN L+ G C  G+++ ARE+F ++  KG + +VV+Y ++I+G  K     EA  ++
Sbjct: 455 HICIYNILIQGMCNFGKLEAARELFSNLFVKGIQPSVVTYTVMISGLLKEGLSNEACEMF 514

Query: 357 RQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILID 411
           R+++ NG      TYN  + G  + G    A +L +EM       D ST+ +L+D
Sbjct: 515 RKMVVNGCLPNSCTYNVAIQGFLRNGDPSNAVRLIEEMVGRGFSADSSTFQMLLD 569



 Score =  125 bits (315), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 79/252 (31%), Positives = 125/252 (49%), Gaps = 13/252 (5%)

Query: 55  NLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLN 114
            ++EA+  F  M     +P +  +N+L     K+R  +   +   ++    L PD +T +
Sbjct: 331 QMDEAQKLFDIMVGKGFAPSVRVYNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYS 390

Query: 115 ILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRL 174
            L+       +G C   R + A  LFK M ++G+ PD ITY  L++G C+ G+L  A RL
Sbjct: 391 TLM-------QGFCQAGRPQVAQKLFKEMCSYGLLPDSITYSILLDGLCKHGHLDEAFRL 443

Query: 175 HKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTL 234
            K M     E       +I  Y+I+I  +C  G ++ A+ELF  +  +GI P+VV  T +
Sbjct: 444 LKAMQESKIE------PHICIYNILIQGMCNFGKLEAARELFSNLFVKGIQPSVVTYTVM 497

Query: 235 IHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGL 294
           I G    G   E   +F +M+  G  PN  T+NV I    + G  + A  L+E M+ RG 
Sbjct: 498 ISGLLKEGLSNEACEMFRKMVVNGCLPNSCTYNVAIQGFLRNGDPSNAVRLIEEMVGRGF 557

Query: 295 NPDRFTYNSLMD 306
           + D  T+  L+D
Sbjct: 558 SADSSTFQMLLD 569


>gi|8493580|gb|AAF75803.1|AC011000_6 Contains weak similarity to leaf protein from Ipomea nil gb|D85101
           and contains a RepB PF|01051 protein and multiple PPR
           PF|01535 repeats [Arabidopsis thaliana]
          Length = 613

 Score =  364 bits (934), Expect = 8e-98,   Method: Compositional matrix adjust.
 Identities = 205/565 (36%), Positives = 309/565 (54%), Gaps = 71/565 (12%)

Query: 54  INLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVIS----------------- 96
           + L++A   FG M   +P P I  FN L  A+AK   +D VIS                 
Sbjct: 43  LKLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSY 102

Query: 97  ------FYR------------KLVSIGLLPDFLTLNILINCFGNKER------------- 125
                 F R            K++ +G  PD +TL+ L+N + + +R             
Sbjct: 103 NILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFV 162

Query: 126 ---------------GLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSV 170
                          GL + N+  EA  L   M+A G +PD+ TYGT++NG C+ G++ +
Sbjct: 163 MEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDL 222

Query: 171 ALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVV 230
           AL L KKM  G  E       ++  Y+ IID+LC    V+ A  LF EM  +GI P VV 
Sbjct: 223 ALSLLKKMEKGKIE------ADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVT 276

Query: 231 CTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMI 290
             +LI   C  G W + + L  +M++    PN++TF+ +ID   K GK+ EA  L + MI
Sbjct: 277 YNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMI 336

Query: 291 QRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVE 350
           +R ++PD FTY+SL++G+C+  R+D A+ +F  M SK C   VV+YN LI G+CK   VE
Sbjct: 337 KRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVE 396

Query: 351 EAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILI 410
           E M L+R++   G+    +TYNTL+ GLFQAG    AQK+F +M    V PD+ TY+IL+
Sbjct: 397 EGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILL 456

Query: 411 DGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLV 470
           DGLCK   +++A+ +F  L+ +K E  I  +N +I+G+CKAG++++ W+LF  L  KG+ 
Sbjct: 457 DGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVK 516

Query: 471 PTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVEL 530
           P V+ Y+ MI G CRKG  E+A+     M+++G  PN  T+NTL+   L++   +   EL
Sbjct: 517 PNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAEL 576

Query: 531 LHKMAEPERNLVPDDTTFSIVVDLL 555
           + +M       V D +T S+V+++L
Sbjct: 577 IKEMRSC--GFVGDASTISMVINML 599



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 125/433 (28%), Positives = 220/433 (50%), Gaps = 8/433 (1%)

Query: 125 RGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYE 184
           R + ++ ++ +A  LF  M+     P ++ +  L++   +     + + L ++M     +
Sbjct: 37  RNVLLDLKLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERM-----Q 91

Query: 185 NGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNW 244
           N  IS  +++SY+I+I+  C+   +  A  +  +M   G  P +V  ++L++G+C     
Sbjct: 92  NLRIS-YDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRI 150

Query: 245 EEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSL 304
            E   L  +M  +  +PN +TFN +I  L    K +EA  L++ M+ RG  PD FTY ++
Sbjct: 151 SEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTV 210

Query: 305 MDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGV 364
           ++G C  G ID A  +   M     +  VV Y  +I+  C   NV +A++L+ ++ + G+
Sbjct: 211 VNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGI 270

Query: 365 RQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVK 424
           R  V+TYN+L+  L   G+   A +L  +M    + P++ T++ LID   K   + EA K
Sbjct: 271 RPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEK 330

Query: 425 LFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLC 484
           L+  +     +  I  ++ LI+G C   RLD A  +F  +  K   P VVTY+ +I G C
Sbjct: 331 LYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFC 390

Query: 485 RKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPD 544
           +  ++E+  +    M + G   N VT+NTL+ G  Q        ++  KM      + PD
Sbjct: 391 KAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSD--GVPPD 448

Query: 545 DTTFSIVVDLLAK 557
             T+SI++D L K
Sbjct: 449 IITYSILLDGLCK 461



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 88/323 (27%), Positives = 152/323 (47%), Gaps = 7/323 (2%)

Query: 264 LTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLS 323
           L+ NV++D      K+++A  L   M+Q    P    +N L+     + + D    +   
Sbjct: 35  LSRNVLLDL-----KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGER 89

Query: 324 MHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQ 383
           M +    + + SYNILIN +C+   +  A+++  +++  G    ++T ++LL+G     +
Sbjct: 90  MQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKR 149

Query: 384 AGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNC 443
              A  L D+M +   +P+  T+N LI GL  +N   EAV L   +     +  +  +  
Sbjct: 150 ISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGT 209

Query: 444 LIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNG 503
           +++GLCK G +D A  L  K+ +  +   VV Y+ +I  LC    +  A +    M+  G
Sbjct: 210 VVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKG 269

Query: 504 CAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
             PNVVT+N+L+       + S    LL  M E  R + P+  TFS ++D   K+ K  E
Sbjct: 270 IRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIE--RKINPNVVTFSALIDAFVKEGKLVE 327

Query: 564 CSAVSKSSYRACLYVTIFQPSSL 586
              +     +  +   IF  SSL
Sbjct: 328 AEKLYDEMIKRSIDPDIFTYSSL 350



 Score = 82.0 bits (201), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 66/250 (26%), Positives = 107/250 (42%), Gaps = 36/250 (14%)

Query: 56  LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNI 115
           L+EA++ F  M      P + ++N L     K +  +  +  +R++   GL+ + +T N 
Sbjct: 360 LDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNT 419

Query: 116 LINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRL- 174
           LI       +GL        A  +FK M++ GV PD+ITY  L++G C+ G L  AL + 
Sbjct: 420 LI-------QGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVF 472

Query: 175 --------------HKKMVSGDYENGLIS--------------KTNIFSYSIIIDSLCKE 206
                         +  M+ G  + G +               K N+  Y+ +I   C++
Sbjct: 473 EYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRK 532

Query: 207 GLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTF 266
           GL ++A  LF EMK  G  P      TLI      G+      L  EM   G   +  T 
Sbjct: 533 GLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTI 592

Query: 267 NVMIDCLCKG 276
           +++I+ L  G
Sbjct: 593 SMVINMLHDG 602


>gi|297835244|ref|XP_002885504.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297331344|gb|EFH61763.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 618

 Score =  363 bits (933), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 204/570 (35%), Positives = 310/570 (54%), Gaps = 61/570 (10%)

Query: 46  HENCKSGIINL--NEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVS 103
            E  ++GI+++  NEA   F  M   +P P +  F+ LF AVA+ + YD V+ F +++  
Sbjct: 38  KERLRNGIVDIKVNEAIDLFESMIQSRPLPSLIDFSKLFSAVARRKEYDLVLGFCKEMDL 97

Query: 104 IGLLPDFLTLNILINCFGNKER----------------------------GLCVENRIKE 135
            G+  +  T+NI+INCF  K +                            G C+E R+ E
Sbjct: 98  NGIEHNMYTMNIMINCFCRKRKLLFAFSVVGRALKFGFEPNTITFSTLINGFCLEGRVSE 157

Query: 136 ATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLIS------ 189
           A  L   M+    RP+V+T  TLING C  G ++ AL L  +MV    E   I+      
Sbjct: 158 AVALVDRMVEMKYRPNVVTVNTLINGLCLKGRVTEALVLIDRMVKYGCEANEITYGPVLN 217

Query: 190 -----------------------KTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINP 226
                                  K ++  YSI+IDSLCK+G +D A  LF EM+ +GI  
Sbjct: 218 RMCKSGNTALALDLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDALSLFNEMEMKGIKA 277

Query: 227 AVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLL 286
            VV  +++I G C  G W++   +  EM+     PN++TF+ +ID   K GK+ EA  L 
Sbjct: 278 DVVAYSSIIGGLCNDGRWDDGAKMLREMIGRNIIPNVVTFSALIDVFVKEGKLLEAKELY 337

Query: 287 ELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKI 346
             M+ RG+ PD  TY+SL+DG+C   R+  A ++   M SKGC+  +V+Y+ILIN YCK 
Sbjct: 338 NEMVARGIAPDTITYSSLIDGFCKENRLGEANQMLDLMVSKGCEPNIVTYSILINSYCKA 397

Query: 347 LNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTY 406
             V+  M L+ +I S G+    +TYNTL+ G  Q+G+   A++LF EM    V P + TY
Sbjct: 398 KRVDNGMRLFCEISSKGLVADTVTYNTLVQGFCQSGKLNVAKELFQEMVSRGVPPSVVTY 457

Query: 407 NILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQ 466
            IL+DGLC N  +Q+A+++F  ++ ++   GI I+N +I G+C A ++D+AW LF  L  
Sbjct: 458 GILLDGLCDNGELQKALEIFEKMQKSRMILGIGIYNIIIHGMCNASKVDDAWSLFCSLSV 517

Query: 467 KGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSK 526
           KG+ P V+TY++MI GLC+KG L +A+     M+++GCAP+  T+N L+   L  +    
Sbjct: 518 KGVKPDVLTYNVMIGGLCKKGSLSEADMLFRKMKEDGCAPSDCTYNILIRAHLGGSGVIS 577

Query: 527 VVELLHKMAEPERNLVPDDTTFSIVVDLLA 556
            VEL+ +M    R    D +T  +VV +L+
Sbjct: 578 SVELIEEM--KMRGFAADASTIKMVVVMLS 605



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 99/352 (28%), Positives = 189/352 (53%), Gaps = 2/352 (0%)

Query: 209 VDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNV 268
           V++A +LF  M      P+++  + L         ++ V G   EM   G   N+ T N+
Sbjct: 50  VNEAIDLFESMIQSRPLPSLIDFSKLFSAVARRKEYDLVLGFCKEMDLNGIEHNMYTMNI 109

Query: 269 MIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKG 328
           MI+C C+  K+  A  ++   ++ G  P+  T+++L++G+CL GR+  A  +   M    
Sbjct: 110 MINCFCRKRKLLFAFSVVGRALKFGFEPNTITFSTLINGFCLEGRVSEAVALVDRMVEMK 169

Query: 329 CKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQ 388
            +  VV+ N LING C    V EA+ L  +++  G     ITY  +L+ + ++G    A 
Sbjct: 170 YRPNVVTVNTLINGLCLKGRVTEALVLIDRMVKYGCEANEITYGPVLNRMCKSGNTALAL 229

Query: 389 KLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGL 448
            LF +M+  +++  +  Y+I+ID LCK+  + +A+ LF+ +EM   +  +  ++ +I GL
Sbjct: 230 DLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDALSLFNEMEMKGIKADVVAYSSIIGGL 289

Query: 449 CKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNV 508
           C  GR D+  ++  ++  + ++P VVT+S +I    ++GKL +A +    M   G AP+ 
Sbjct: 290 CNDGRWDDGAKMLREMIGRNIIPNVVTFSALIDVFVKEGKLLEAKELYNEMVARGIAPDT 349

Query: 509 VTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEK 560
           +T+++L+ GF + N+  +  ++L  M    +   P+  T+SI+++   K ++
Sbjct: 350 ITYSSLIDGFCKENRLGEANQMLDLMV--SKGCEPNIVTYSILINSYCKAKR 399



 Score =  129 bits (323), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 91/321 (28%), Positives = 140/321 (43%), Gaps = 37/321 (11%)

Query: 278 KINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYN 337
           K+NEA  L E MIQ    P    ++ L          D        M   G +H + + N
Sbjct: 49  KVNEAIDLFESMIQSRPLPSLIDFSKLFSAVARRKEYDLVLGFCKEMDLNGIEHNMYTMN 108

Query: 338 ILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLY 397
           I+IN +C+   +  A S+  + +  G     IT++TL++G    G+   A  L D M   
Sbjct: 109 IMINCFCRKRKLLFAFSVVGRALKFGFEPNTITFSTLINGFCLEGRVSEAVALVDRMVEM 168

Query: 398 NVEPDLSTYNILIDGLCKNNCVQE-----------------------------------A 422
              P++ T N LI+GLC    V E                                   A
Sbjct: 169 KYRPNVVTVNTLINGLCLKGRVTEALVLIDRMVKYGCEANEITYGPVLNRMCKSGNTALA 228

Query: 423 VKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHG 482
           + LF  +E    +  +  ++ +ID LCK G LD+A  LF+++  KG+   VV YS +I G
Sbjct: 229 LDLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDALSLFNEMEMKGIKADVVAYSSIIGG 288

Query: 483 LCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLV 542
           LC  G+ +     L  M      PNVVTF+ L+  F++  K  +  EL ++M    R + 
Sbjct: 289 LCNDGRWDDGAKMLREMIGRNIIPNVVTFSALIDVFVKEGKLLEAKELYNEMV--ARGIA 346

Query: 543 PDDTTFSIVVDLLAKDEKYHE 563
           PD  T+S ++D   K+ +  E
Sbjct: 347 PDTITYSSLIDGFCKENRLGE 367



 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 67/236 (28%), Positives = 114/236 (48%), Gaps = 4/236 (1%)

Query: 324 MHSKGCKHTVVSYN-ILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAG 382
           +H        VSY   L NG   I  V EA+ L+  +I +    ++I ++ L S + +  
Sbjct: 25  LHYSCISEAKVSYKERLRNGIVDI-KVNEAIDLFESMIQSRPLPSLIDFSKLFSAVARRK 83

Query: 383 QAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFN 442
           +         EM L  +E ++ T NI+I+  C+   +  A  +        FE     F+
Sbjct: 84  EYDLVLGFCKEMDLNGIEHNMYTMNIMINCFCRKRKLLFAFSVVGRALKFGFEPNTITFS 143

Query: 443 CLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKN 502
            LI+G C  GR+  A  L  ++ +    P VVT + +I+GLC KG++ +A   +  M K 
Sbjct: 144 TLINGFCLEGRVSEAVALVDRMVEMKYRPNVVTVNTLINGLCLKGRVTEALVLIDRMVKY 203

Query: 503 GCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKD 558
           GC  N +T+  +++   ++  T+  ++L  KM   ER++      +SIV+D L KD
Sbjct: 204 GCEANEITYGPVLNRMCKSGNTALALDLFRKM--EERSIKASVVQYSIVIDSLCKD 257


>gi|18391414|ref|NP_563911.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75167758|sp|Q9ASZ8.1|PPR37_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g12620
 gi|13605505|gb|AAK32746.1|AF361578_1 At1g12620/T12C24_25 [Arabidopsis thaliana]
 gi|24111307|gb|AAN46777.1| At1g12620/T12C24_25 [Arabidopsis thaliana]
 gi|332190781|gb|AEE28902.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 621

 Score =  363 bits (931), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 203/587 (34%), Positives = 317/587 (54%), Gaps = 63/587 (10%)

Query: 29  RQIAAVSSPETQLNEFLHENCKSGIINLNE--ARYFFGYMTHMQPSPPISSFNLLFGAVA 86
           R  ++VS  + +++    E  +SGI+++ E  A   F  MT  +P P +  F+ LF  VA
Sbjct: 26  RVFSSVSDGKGKVS--YRERLRSGIVDIKEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVA 83

Query: 87  KNRHYDAVISFYRKLVSIGLLPDFLTLNILINC--------------------------- 119
           + + YD V+   +++   G+  +  TL+I+INC                           
Sbjct: 84  RTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTV 143

Query: 120 -FGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKM 178
            F     GLC+E R+ EA  L   M+  G +P +IT   L+NG C  G +S A+ L  +M
Sbjct: 144 TFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRM 203

Query: 179 VSGDYENGLIS-----------------------------KTNIFSYSIIIDSLCKEGLV 209
           V   ++   ++                             K +   YSIIID LCK+G +
Sbjct: 204 VETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSL 263

Query: 210 DKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVM 269
           D A  LF EM+ +G    +++ TTLI GFC AG W++   L  +M+     P+++ F+ +
Sbjct: 264 DNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSAL 323

Query: 270 IDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGC 329
           IDC  K GK+ EA  L + MIQRG++PD  TY SL+DG+C   ++D A  +   M SKGC
Sbjct: 324 IDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGC 383

Query: 330 KHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQK 389
              + ++NILINGYCK   +++ + L+R++   GV    +TYNTL+ G  + G+   A++
Sbjct: 384 GPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKE 443

Query: 390 LFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLC 449
           LF EM    V PD+ +Y IL+DGLC N   ++A+++F  +E +K E  I I+N +I G+C
Sbjct: 444 LFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMC 503

Query: 450 KAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVV 509
            A ++D+AW+LF  LP KG+ P V TY+IMI GLC+KG L +A+     ME++G +PN  
Sbjct: 504 NASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGC 563

Query: 510 TFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLA 556
           T+N L+   L     +K  +L+ ++         D +T  +VVD+L+
Sbjct: 564 TYNILIRAHLGEGDATKSAKLIEEIKRC--GFSVDASTVKMVVDMLS 608



 Score =  125 bits (314), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 82/293 (27%), Positives = 138/293 (47%), Gaps = 2/293 (0%)

Query: 278 KINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYN 337
           K ++A  L + M +    P    ++ L        + D   ++   M  KG  H + + +
Sbjct: 52  KEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLS 111

Query: 338 ILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLY 397
           I+IN  C+   +  A S   +II  G     +T++TL++GL   G+   A +L D M   
Sbjct: 112 IMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEM 171

Query: 398 NVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNA 457
             +P L T N L++GLC N  V +AV L   +    F+     +  ++  +CK+G+   A
Sbjct: 172 GHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALA 231

Query: 458 WELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHG 517
            EL  K+ ++ +    V YSI+I GLC+ G L+ A +    ME  G   +++ + TL+ G
Sbjct: 232 MELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRG 291

Query: 518 FLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKS 570
           F    +     +LL  M   +R + PD   FS ++D   K+ K  E   + K 
Sbjct: 292 FCYAGRWDDGAKLLRDMI--KRKITPDVVAFSALIDCFVKEGKLREAEELHKE 342



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 68/275 (24%), Positives = 118/275 (42%), Gaps = 47/275 (17%)

Query: 36  SPETQ-----LNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRH 90
           SP+T      ++ F  EN       L++A +    M      P I +FN+L     K   
Sbjct: 349 SPDTVTYTSLIDGFCKEN------QLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANL 402

Query: 91  YDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRP 150
            D  +  +RK+   G++ D +T N LI       +G C   +++ A  LF+ M++  VRP
Sbjct: 403 IDDGLELFRKMSLRGVVADTVTYNTLI-------QGFCELGKLEVAKELFQEMVSRRVRP 455

Query: 151 DVITYGTLINGFCRTGNLSVALRLHKKMVSGDYE----------NGLIS----------- 189
           D+++Y  L++G C  G    AL + +K+     E          +G+ +           
Sbjct: 456 DIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLF 515

Query: 190 --------KTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCA 241
                   K ++ +Y+I+I  LCK+G + +A  LF +M+  G +P       LI      
Sbjct: 516 CSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGE 575

Query: 242 GNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKG 276
           G+  +   L  E+   G   +  T  +++D L  G
Sbjct: 576 GDATKSAKLIEEIKRCGFSVDASTVKMVVDMLSDG 610


>gi|449462483|ref|XP_004148970.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 917

 Score =  363 bits (931), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 195/508 (38%), Positives = 297/508 (58%), Gaps = 17/508 (3%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
           P +++ ++L   + K             ++  G + D +T + LI       +GLC+E+R
Sbjct: 345 PDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLI-------KGLCMEHR 397

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
           I EATWLF +M   G RPD ITYGTL+ G C+TGN+++AL+LH++M++     G+  K  
Sbjct: 398 ISEATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPT 457

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
           + SYSIIID LCK+   D+A+ELF EMK +GI P V+  TTLIHGFC +G WE+   LF 
Sbjct: 458 LISYSIIIDGLCKDRREDEARELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFN 517

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
           EMLD+G +P++ T +V+ID LCK GK+ EAN LLE++IQRG   D  T  +L+ G C+  
Sbjct: 518 EMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCILDVVTCTTLVKGLCMKH 577

Query: 313 RIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISN------GVRQ 366
           RI  A ++FL M   GC   VV+   L+ G C+  N++ A+ L++ ++S+        + 
Sbjct: 578 RISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKP 637

Query: 367 TVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLF 426
             I+Y+ ++ GL + G+   A++LF EMK   V PD+ +Y  LI G C++   ++A  LF
Sbjct: 638 NAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLF 697

Query: 427 HMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRK 486
           + +     +  +  F+ LID LCK G++  A EL   + Q+G +P  VTY+ ++ GLC  
Sbjct: 698 NEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMN 757

Query: 487 GKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKM----AEPERNLV 542
            ++ +A    + M+K GC P+VVT+ TLM G  Q       +EL  KM     +   N  
Sbjct: 758 DRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFK 817

Query: 543 PDDTTFSIVVDLLAKDEKYHECSAVSKS 570
           PD  ++SI++D L K  +  E   + K 
Sbjct: 818 PDVISYSIIIDGLCKHGREDEARELFKE 845



 Score =  327 bits (838), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 181/504 (35%), Positives = 293/504 (58%), Gaps = 22/504 (4%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
           P +++ ++L   + K             ++  G + D +T + LI       +GLC+E+R
Sbjct: 52  PDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLI-------KGLCMEHR 104

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
           I EATWLF +M   G RPD ITYGTL+ G C+TGN+++AL+LH++M++     G+  K  
Sbjct: 105 ISEATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPT 164

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
           + SYSIIID LCK+   D+A+ELF EMK +G+ P V+  T+LIHGFC +G WE+   LF 
Sbjct: 165 LISYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFN 224

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
           EMLD+G +P++ T  V+ID  CK GK+ EAN LLE+M+ RG   D  TY++L+ G C+  
Sbjct: 225 EMLDVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVHRGCILDIVTYSTLIKGLCMKH 284

Query: 313 RIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNG-------VR 365
           RI  A ++F+SM   GC+   ++Y  L+ G C+   +  A+ L+++++++        +R
Sbjct: 285 RISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCIR 344

Query: 366 QTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKL 425
             V T + L+  L + G+   A +L + M       D+ TY+ LI GLC  + + EA  L
Sbjct: 345 PDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWL 404

Query: 426 FHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKL----PQKGL--VPTVVTYSIM 479
           F  ++          +  L+ GLC+ G ++ A +L  ++     + G+   PT+++YSI+
Sbjct: 405 FMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSII 464

Query: 480 IHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPER 539
           I GLC+  + ++A +    M+  G  P+V+++ TL+HGF  + K  K   L ++M +   
Sbjct: 465 IDGLCKDRREDEARELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDV-- 522

Query: 540 NLVPDDTTFSIVVDLLAKDEKYHE 563
            + PD TT S+++D+L K  K  E
Sbjct: 523 GIQPDVTTSSVLIDMLCKKGKVIE 546



 Score =  266 bits (681), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 172/587 (29%), Positives = 284/587 (48%), Gaps = 78/587 (13%)

Query: 57  NEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNIL 116
           +EAR  F  M      P + S+  L      +  ++     + +++ +G+ PD  T  +L
Sbjct: 182 DEARELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVGIQPDVTTSGVL 241

Query: 117 INCFGNKE----------------------------RGLCVENRIKEATWLFKNMIAFGV 148
           I+ F  +                             +GLC+++RI EAT LF +M   G 
Sbjct: 242 IDMFCKEGKVIEANELLEVMVHRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKKLGC 301

Query: 149 RPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLIS-KTNIFSYSIIIDSLCKEG 207
           RPD I YGTL+ G C+TG +++AL LH++M++   + G+   + ++ + S++ID LCKEG
Sbjct: 302 RPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCIRPDVTTSSMLIDILCKEG 361

Query: 208 LVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPN----- 262
            V +A EL   M  RG    +V  +TLI G C      E   LF+ M  LG RP+     
Sbjct: 362 KVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITYG 421

Query: 263 ------------------------------------LLTFNVMIDCLCKGGKINEANGLL 286
                                               L++++++ID LCK  + +EA  L 
Sbjct: 422 TLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELF 481

Query: 287 ELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKI 346
           E M  +G+ PD  +Y +L+ G+CL G+ + A+ +F  M   G +  V + ++LI+  CK 
Sbjct: 482 EEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKK 541

Query: 347 LNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTY 406
             V EA  L   +I  G    V+T  TL+ GL    +   A +LF +M+     P++ T 
Sbjct: 542 GKVIEANKLLEVVIQRGCILDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTC 601

Query: 407 NILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEI------FNCLIDGLCKAGRLDNAWEL 460
             L+ GLC++  ++ A++L   +  +   +GI        ++ +IDGLCK GR D A EL
Sbjct: 602 ATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEAREL 661

Query: 461 FHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQ 520
           F ++   G++P V++Y+ +IHG CR GK + A      M   G  P+V TF+ L+    +
Sbjct: 662 FKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCK 721

Query: 521 NNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAV 567
             K  +  ELL  M   +R  +P+  T++ +V  L  +++  E + +
Sbjct: 722 EGKVIEANELLEVMI--QRGCIPNTVTYTTLVKGLCMNDRISEATQL 766



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 146/511 (28%), Positives = 228/511 (44%), Gaps = 91/511 (17%)

Query: 105 GLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCR 164
           GL PD  T NILINC       LC   R+ E       ++  G  PD++TY         
Sbjct: 5   GLFPDSFTFNILINC-------LCNVKRVNEGLAAMAGIMRRGYIPDIVTYSI------- 50

Query: 165 TGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGI 224
                                    + ++ + S++ID LCKEG V +A EL   M  RG 
Sbjct: 51  -------------------------RPDVTTSSMLIDILCKEGKVIEANELLEVMIQRGC 85

Query: 225 NPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPN---------------------- 262
              +V  +TLI G C      E   LF+ M  LG RP+                      
Sbjct: 86  ILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQ 145

Query: 263 -------------------LLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNS 303
                              L++++++ID LCK  + +EA  L + M  +G+ PD  +Y S
Sbjct: 146 LHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTS 205

Query: 304 LMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNG 363
           L+ G+C  G+ + A+ +F  M   G +  V +  +LI+ +CK   V EA  L   ++  G
Sbjct: 206 LIHGFCHSGKWEKAKCLFNEMLDVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVHRG 265

Query: 364 VRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAV 423
               ++TY+TL+ GL    +   A +LF  MK     PD   Y  L+ GLC+   +  A+
Sbjct: 266 CILDIVTYSTLIKGLCMKHRISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIAL 325

Query: 424 KLFHMLEMNKFEFGIEIF-------NCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTY 476
            L   +  +  ++GI+         + LID LCK G++  A EL   + Q+G +  +VTY
Sbjct: 326 HLHQEMLNDTSQYGIKCIRPDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTY 385

Query: 477 SIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAE 536
           S +I GLC + ++ +A    + M+K GC P+ +T+ TLM G  Q    +  ++L  +M  
Sbjct: 386 STLIKGLCMEHRISEATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLN 445

Query: 537 PER----NLVPDDTTFSIVVDLLAKDEKYHE 563
                     P   ++SI++D L KD +  E
Sbjct: 446 DTGRYGIKCKPTLISYSIIIDGLCKDRREDE 476



 Score =  188 bits (477), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 102/261 (39%), Positives = 149/261 (57%), Gaps = 12/261 (4%)

Query: 23  SLFKSPRQIAAVSSPET-QLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLL 81
            LFK  + +  +  P+       +H  C+SG     +A+Y F  M  +   P +++F++L
Sbjct: 660 ELFKEMKALGVI--PDVISYTSLIHGFCRSG--KWKDAKYLFNEMVDIGVQPDVTTFSVL 715

Query: 82  FGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFK 141
              + K             ++  G +P+ +T   L+       +GLC+ +RI EAT LF 
Sbjct: 716 IDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLV-------KGLCMNDRISEATQLFM 768

Query: 142 NMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIID 201
            M   G  PDV+TYGTL+ G C+TGN+  AL LHKKM+S   + G   K ++ SYSIIID
Sbjct: 769 KMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIID 828

Query: 202 SLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRP 261
            LCK G  D+A+ELF EMK  G+ P V+  T+LIHGFC +G  E+   LF EM+D G + 
Sbjct: 829 GLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQL 888

Query: 262 NLLTFNVMIDCLCKGGKINEA 282
           N +T++VMI   CK G+I++A
Sbjct: 889 NAVTYSVMIHGFCKEGQIDKA 909



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 57/190 (30%), Positives = 92/190 (48%), Gaps = 13/190 (6%)

Query: 394 MKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNC---------L 444
           M+L  + PD  T+NILI+ LC    V E +     +    +   I  ++          L
Sbjct: 1   MRLAGLFPDSFTFNILINCLCNVKRVNEGLAAMAGIMRRGYIPDIVTYSIRPDVTTSSML 60

Query: 445 IDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGC 504
           ID LCK G++  A EL   + Q+G +  +VTYS +I GLC + ++ +A    + M+K GC
Sbjct: 61  IDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGC 120

Query: 505 APNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPER----NLVPDDTTFSIVVDLLAKDEK 560
            P+ +T+ TLM G  Q    +  ++L  +M            P   ++SI++D L KD +
Sbjct: 121 RPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRR 180

Query: 561 YHECSAVSKS 570
             E   + K 
Sbjct: 181 EDEARELFKE 190


>gi|255764587|gb|ACU33853.1| PPR1 protein [Capsicum annuum]
          Length = 577

 Score =  362 bits (930), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 195/542 (35%), Positives = 309/542 (57%), Gaps = 37/542 (6%)

Query: 46  HENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIG 105
           H N    +  L++A   F  M  M+P P +  F+ LF  +   +HY AV+S +R++  +G
Sbjct: 33  HINFDKEVSCLDDAVSLFHRMVRMKPLPSVIDFSKLFKTMINMKHYSAVVSLFREMRILG 92

Query: 106 LLPDFLTLNILINCFGNKER----------------------------GLCVENRIKEAT 137
           +      LNI+ N +  + R                            GL  EN++ +A 
Sbjct: 93  IPISDSILNIVTNSYCLRHRIDCAFSVLPIYLKTGIPFNVVTFNTLLGGLFAENKVTDAV 152

Query: 138 WLFKNMIAFGV-RPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSY 196
            LFK ++   +  P+ + YGT++NG  + G+    L L + M  G+      +K ++ +Y
Sbjct: 153 VLFKKLVREKICEPNEVMYGTVMNGLSKRGHTEKTLSLLRIMEQGN------TKPDVRTY 206

Query: 197 SIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLD 256
           SI+ID+LCK+  +D A  L  EMK + I P +    +LI G C  G WE+V  L  EM++
Sbjct: 207 SIVIDALCKDINLDAAINLLNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVN 266

Query: 257 LGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDT 316
           L   PN+ TF+++ID LCK GK+ +A+ ++  MI++G+ PD  TY+++MDGYCL G++D 
Sbjct: 267 LNINPNVHTFSILIDGLCKEGKVEDADEVMRHMIEKGVEPDIITYSAIMDGYCLRGQVDR 326

Query: 317 AREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLS 376
           AR +F  +  KG K  + SY+ILINGYCK  N+ +AM L+ +I   G++   +TY+T+L 
Sbjct: 327 ARRVFNVLRDKGIKPNIFSYSILINGYCKKKNLAKAMQLFGEISQKGLKPDTVTYSTILH 386

Query: 377 GLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEF 436
           GL + G+ G A+K+FDEM      PD+  ++ L+ G  K   V+EA+ LF  LE N+ + 
Sbjct: 387 GLIEVGRIGDAKKIFDEMLRVGPTPDICLHSTLLFGYFKYGLVEEAMLLFSKLERNREDT 446

Query: 437 GIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFL 496
            I  +  +I+GLCK  R+  A  +F KLP  GL+P V TY++MI G CR+G  ++    L
Sbjct: 447 NISFYTVVINGLCKNDRVREAHAIFEKLPSIGLIPDVRTYNVMITGFCREGLFDEVKGIL 506

Query: 497 LYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLA 556
             ME NGC  N +T+N +M GF ++NK S++V  + +MA   R    D TT  +++++L 
Sbjct: 507 RKMEDNGCPANNITYNVIMQGFFRSNKISEIVSFMKEMA--GRGFSFDATTTGVLINVLK 564

Query: 557 KD 558
           ++
Sbjct: 565 EN 566



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 107/375 (28%), Positives = 189/375 (50%), Gaps = 15/375 (4%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CK   INL+ A      M      P I ++N L   + K   ++ V +   ++V++ + P
Sbjct: 214 CKD--INLDAAINLLNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLNINP 271

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           +  T +ILI+       GLC E ++++A  + ++MI  GV PD+ITY  +++G+C  G +
Sbjct: 272 NVHTFSILID-------GLCKEGKVEDADEVMRHMIEKGVEPDIITYSAIMDGYCLRGQV 324

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
             A R+   +     + G+  K NIFSYSI+I+  CK+  + KA +LF E+  +G+ P  
Sbjct: 325 DRARRVFNVL----RDKGI--KPNIFSYSILINGYCKKKNLAKAMQLFGEISQKGLKPDT 378

Query: 229 VVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLEL 288
           V  +T++HG    G   +   +F EML +GP P++   + ++    K G + EA  L   
Sbjct: 379 VTYSTILHGLIEVGRIGDAKKIFDEMLRVGPTPDICLHSTLLFGYFKYGLVEEAMLLFSK 438

Query: 289 MIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILN 348
           + +   + +   Y  +++G C   R+  A  IF  + S G    V +YN++I G+C+   
Sbjct: 439 LERNREDTNISFYTVVINGLCKNDRVREAHAIFEKLPSIGLIPDVRTYNVMITGFCREGL 498

Query: 349 VEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNI 408
            +E   + R++  NG     ITYN ++ G F++ +         EM       D +T  +
Sbjct: 499 FDEVKGILRKMEDNGCPANNITYNVIMQGFFRSNKISEIVSFMKEMAGRGFSFDATTTGV 558

Query: 409 LIDGLCKNNCVQEAV 423
           LI+ L +N  + + +
Sbjct: 559 LINVLKENPSIVDMI 573



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 62/257 (24%), Positives = 108/257 (42%), Gaps = 38/257 (14%)

Query: 349 VEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNI 408
           +++A+SL+ +++      +VI ++ L   +           LF EM++  +    S  NI
Sbjct: 43  LDDAVSLFHRMVRMKPLPSVIDFSKLFKTMINMKHYSAVVSLFREMRILGIPISDSILNI 102

Query: 409 LIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKL---- 464
           + +  C  + +  A  +  +       F +  FN L+ GL    ++ +A  LF KL    
Sbjct: 103 VTNSYCLRHRIDCAFSVLPIYLKTGIPFNVVTFNTLLGGLFAENKVTDAVVLFKKLVREK 162

Query: 465 --------------------------------PQKGLVPTVVTYSIMIHGLCRKGKLEKA 492
                                            Q    P V TYSI+I  LC+   L+ A
Sbjct: 163 ICEPNEVMYGTVMNGLSKRGHTEKTLSLLRIMEQGNTKPDVRTYSIVIDALCKDINLDAA 222

Query: 493 NDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVV 552
            + L  M++    PN+ T+N+L+ G  +  +  KV  LL +M     N+ P+  TFSI++
Sbjct: 223 INLLNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMV--NLNINPNVHTFSILI 280

Query: 553 DLLAKDEKYHECSAVSK 569
           D L K+ K  +   V +
Sbjct: 281 DGLCKEGKVEDADEVMR 297


>gi|224130828|ref|XP_002328386.1| predicted protein [Populus trichocarpa]
 gi|222838101|gb|EEE76466.1| predicted protein [Populus trichocarpa]
          Length = 617

 Score =  362 bits (929), Expect = 3e-97,   Method: Compositional matrix adjust.
 Identities = 198/537 (36%), Positives = 299/537 (55%), Gaps = 36/537 (6%)

Query: 51  SGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDF 110
           S  I++++A   F  M  M P P +  F    G++AK + Y + +S   ++   G+  + 
Sbjct: 72  SNDISIDDALTSFYRMVRMNPRPSVVEFGKFLGSIAKKKQYSSAVSLCNQMDLFGVTHNV 131

Query: 111 LTLNILINC----------------------------FGNKERGLCVENRIKEATWLFKN 142
            +LN+LINC                            F     GLC E +IKEA  LF  
Sbjct: 132 YSLNVLINCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNE 191

Query: 143 MIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDS 202
           M+  G  P+VI+Y T+ING C+ GN  +A+R+ +KM           K N+ +Y+ IIDS
Sbjct: 192 MVWSGHEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNR------GKPNVVTYNTIIDS 245

Query: 203 LCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPN 262
           LCK+ LV++A E   EM  RGI P VV   T++HGFC  G   E   LF EM+     P+
Sbjct: 246 LCKDRLVNEAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPD 305

Query: 263 LLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFL 322
            +TFN+++D LCK G ++EA  + E M ++G  P+ +TYN+LMDGYCL  ++D A ++  
Sbjct: 306 TVTFNILVDGLCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLG 365

Query: 323 SMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAG 382
            M  KGC   + SYNILINGYCK   + EA  L  ++    +    +TY+TL+ GL Q G
Sbjct: 366 IMIGKGCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVG 425

Query: 383 QAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFN 442
           +   A  LF EM    + PDL  Y+IL+DG CK+  + EA+KL   +   + +  I ++ 
Sbjct: 426 RPREALNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERRIKPNIILYT 485

Query: 443 CLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKN 502
            LI G+  AG+L+ A ELF KL   G+ P + TY++MI GL ++G  ++A +F   ME +
Sbjct: 486 ILIRGMFIAGKLEVAKELFSKLSADGIRPDIWTYNVMIKGLLKEGLSDEAYEFFRKMEDD 545

Query: 503 GCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDE 559
           G  P+  ++N ++ GFLQN  +S  ++L+ +M    +    D +TF +++DL + DE
Sbjct: 546 GFLPDSCSYNVIIQGFLQNQDSSTAIQLIDEMV--GKRFSADSSTFQMLLDLESHDE 600



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/257 (32%), Positives = 133/257 (51%), Gaps = 2/257 (0%)

Query: 314 IDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNT 373
           ID A   F  M     + +VV +   +    K      A+SL  Q+   GV   V + N 
Sbjct: 77  IDDALTSFYRMVRMNPRPSVVEFGKFLGSIAKKKQYSSAVSLCNQMDLFGVTHNVYSLNV 136

Query: 374 LLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNK 433
           L++ L +     +A  +  +M    ++PD  T+N LI+GLC    ++EAV LF+ +  + 
Sbjct: 137 LINCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWSG 196

Query: 434 FEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKAN 493
            E  +  +N +I+GLCK G    A  +F K+ Q    P VVTY+ +I  LC+   + +A 
Sbjct: 197 HEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEAV 256

Query: 494 DFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
           +FL  M   G  P+VVT+NT++HGF    + ++   L  +M    RN++PD  TF+I+VD
Sbjct: 257 EFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVG--RNVMPDTVTFNILVD 314

Query: 554 LLAKDEKYHECSAVSKS 570
            L K+    E   VS++
Sbjct: 315 GLCKEGMVSEARCVSET 331


>gi|449531171|ref|XP_004172561.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Cucumis sativus]
          Length = 761

 Score =  362 bits (929), Expect = 3e-97,   Method: Compositional matrix adjust.
 Identities = 199/537 (37%), Positives = 306/537 (56%), Gaps = 19/537 (3%)

Query: 44  FLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVS 103
            +H  C+SG     +A+  F  M  +     +++ ++L   + K             ++ 
Sbjct: 162 LIHGFCRSG--KWEKAKCLFNEMLDVGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQ 219

Query: 104 IGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFC 163
            G + D +T + LI       +GLC+++RI EAT LF +M   G RPD I YGTL+ G C
Sbjct: 220 RGCILDIVTYSTLI-------KGLCMKHRISEATRLFMSMQKLGCRPDAIAYGTLMKGLC 272

Query: 164 RTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRG 223
           +TGN++ AL+LH++M++     G+  K  + SYSIIID LCK+   D+A+ELF EMK +G
Sbjct: 273 QTGNINTALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQG 332

Query: 224 INPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEAN 283
           I P V+  TTLIHGFC +G WE+   LF EMLD+G +P++ T +V+ID LCK GK+ EAN
Sbjct: 333 IMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEAN 392

Query: 284 GLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGY 343
            LLE++IQRG  PD  T  +L+ G C+  RI  A ++FL M   GC   VV+   L+ G 
Sbjct: 393 KLLEVVIQRGCIPDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGL 452

Query: 344 CKILNVEEAMSLYRQIISN------GVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLY 397
           C+  N++ A+ L++ ++S+        +   I+Y+ ++ GL + G+   A++LF EMK  
Sbjct: 453 CQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKAL 512

Query: 398 NVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNA 457
            V PD+ +Y  LI G C++   ++A  LF+ +     +  +  F+ LID LCK G++  A
Sbjct: 513 GVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEA 572

Query: 458 WELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHG 517
            EL   + Q+G +P  VTY+ ++ GLC   ++ +A    + M+K GC P+VVT+ TLM G
Sbjct: 573 NELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKG 632

Query: 518 FLQNNKTSKVVELLHKM----AEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKS 570
             Q       +EL  KM     +   N  PD  ++SI++D L K  +  E   + K 
Sbjct: 633 LCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKE 689



 Score =  345 bits (884), Expect = 6e-92,   Method: Compositional matrix adjust.
 Identities = 189/502 (37%), Positives = 291/502 (57%), Gaps = 17/502 (3%)

Query: 66  MTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKER 125
           M H+   P +++  +L     K             +V  G + D +T + LI       +
Sbjct: 1   MLHVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLI-------K 53

Query: 126 GLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYEN 185
           GLC+++RI EAT LF +M   G RPD I YGTL+ G C+TG +++AL LH++M++   + 
Sbjct: 54  GLCMKHRISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQY 113

Query: 186 GLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWE 245
           G+  K  + SYSIIID LCK+   D+A+ELF EMK +G+ P V+  T+LIHGFC +G WE
Sbjct: 114 GIKCKPTLVSYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWE 173

Query: 246 EVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLM 305
           +   LF EMLD+G R ++ T +++ID LCK GK+ EAN LLE+MIQRG   D  TY++L+
Sbjct: 174 KAKCLFNEMLDVGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLI 233

Query: 306 DGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVR 365
            G C+  RI  A  +F+SM   GC+   ++Y  L+ G C+  N+  A+ L+++++++  R
Sbjct: 234 KGLCMKHRISEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGR 293

Query: 366 ------QTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCV 419
                  T+I+Y+ ++ GL +  +   A++LF EMK   + PD+ +Y  LI G C +   
Sbjct: 294 YGIKCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKW 353

Query: 420 QEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIM 479
           ++A  LF+ +     +  +   + LID LCK G++  A +L   + Q+G +P VVT + +
Sbjct: 354 EKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTL 413

Query: 480 IHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPER 539
           + GLC K ++ KA    L M+K GC PNVVT  TLM G  Q+      +EL   M     
Sbjct: 414 VKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTS 473

Query: 540 ----NLVPDDTTFSIVVDLLAK 557
               N  P+  ++SI++D L K
Sbjct: 474 PYGINCKPNAISYSIIIDGLCK 495



 Score =  297 bits (761), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 159/427 (37%), Positives = 250/427 (58%), Gaps = 17/427 (3%)

Query: 44  FLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVS 103
            +H  C SG     +A+  F  M  +   P +++ ++L   + K             ++ 
Sbjct: 343 LIHGFCLSG--KWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQ 400

Query: 104 IGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFC 163
            G +PD +T   L+       +GLC+++RI +AT LF  M   G  P+V+T  TL+ G C
Sbjct: 401 RGCIPDVVTCTTLV-------KGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLC 453

Query: 164 RTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRG 223
           ++GN+ +AL LHK M+S     G+  K N  SYSIIID LCK G  D+A+ELF EMK  G
Sbjct: 454 QSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALG 513

Query: 224 INPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEAN 283
           + P V+  T+LIHGFC +G W++   LF EM+D+G +P++ TF+V+ID LCK GK+ EAN
Sbjct: 514 VIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEAN 573

Query: 284 GLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGY 343
            LLE+MIQRG  P+  TY +L+ G C+  RI  A ++F+ M   GC   VV+Y  L+ G 
Sbjct: 574 ELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGL 633

Query: 344 CKILNVEEAMSLYRQIISN------GVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLY 397
           C+  N++ A+ L+++++S+        +  VI+Y+ ++ GL + G+   A++LF EMK  
Sbjct: 634 CQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKAL 693

Query: 398 NVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNA 457
            V P++ +Y  LI G C++  +++A  LF+ +     +     ++ +I G CK G++D A
Sbjct: 694 GVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIHGFCKEGQIDKA 753

Query: 458 WELFHKL 464
             LF K+
Sbjct: 754 --LFQKM 758


>gi|291622145|emb|CBJ23782.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
          Length = 630

 Score =  362 bits (929), Expect = 3e-97,   Method: Compositional matrix adjust.
 Identities = 195/526 (37%), Positives = 298/526 (56%), Gaps = 15/526 (2%)

Query: 30  QIAAVSSPETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNR 89
           Q+  +  P       +  NC      L  A    G M  +   P I + + L       +
Sbjct: 106 QMQNLGIPHNHYTYSILLNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGK 165

Query: 90  HYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVR 149
                ++   ++V +G  PD +T N LI+       GL + N+  EA  L   M+A G +
Sbjct: 166 RISEAVALVDQMVEMGYKPDTVTFNTLIH-------GLFLHNKASEAVALIDRMVARGCQ 218

Query: 150 PDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLV 209
           PD+ TYGT++NG C+ G++ +AL L KKM  G  E       N+  Y+ IID LCK   +
Sbjct: 219 PDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIE------ANVVIYNTIIDGLCKYKHM 272

Query: 210 DKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVM 269
           D A +LF +M+ +GI P V    +LI   C  G W + + L  +M++    PN++TFN +
Sbjct: 273 DDAFDLFNKMETKGIKPDVFTYNSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSL 332

Query: 270 IDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGC 329
           ID   K GK+ EA  L + MIQR ++P+  TYNSL++G+C+  R+D A++IF  M SK C
Sbjct: 333 IDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDC 392

Query: 330 KHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQK 389
              VV+YN LI G+CK   VEE M L+R++   G+    +TYNTL+ GLFQAG    AQK
Sbjct: 393 LPDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQK 452

Query: 390 LFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLC 449
           +F +M    V PD+ TY+IL+DGLCK   +++A+ +F  L+ +K E  I  +N +I+G+C
Sbjct: 453 IFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPNIYTYNIMIEGMC 512

Query: 450 KAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVV 509
           KAG++++ W+LF  L  KG+ P V+ Y+ MI G CRKG  E+A+     M+++G  P+  
Sbjct: 513 KAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSG 572

Query: 510 TFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLL 555
            +NTL+   L++   +   EL+ +M       V D +T S+V+++L
Sbjct: 573 CYNTLIRARLRDGDKAASAELIKEMRSC--GFVGDASTISMVINML 616



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 129/428 (30%), Positives = 220/428 (51%), Gaps = 8/428 (1%)

Query: 130 ENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLIS 189
           E ++ +A  LF  M+     P +I +  L++   +     V + L ++M        L  
Sbjct: 59  ELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQM------QNLGI 112

Query: 190 KTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNG 249
             N ++YSI+++  C+   +  A  +  +M   G  P +V  ++L++G+C      E   
Sbjct: 113 PHNHYTYSILLNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVA 172

Query: 250 LFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYC 309
           L  +M+++G +P+ +TFN +I  L    K +EA  L++ M+ RG  PD FTY ++++G C
Sbjct: 173 LVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLC 232

Query: 310 LVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVI 369
             G ID A  +   M     +  VV YN +I+G CK  ++++A  L+ ++ + G++  V 
Sbjct: 233 KRGDIDLALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVF 292

Query: 370 TYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHML 429
           TYN+L+S L   G+   A +L  +M    + P++ T+N LID   K   + EA KLF  +
Sbjct: 293 TYNSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEM 352

Query: 430 EMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKL 489
                +  I  +N LI+G C   RLD A ++F  +  K  +P VVTY+ +I G C+  ++
Sbjct: 353 IQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRV 412

Query: 490 EKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFS 549
           E+  +    M + G   N VT+NTL+ G  Q        ++  KM      + PD  T+S
Sbjct: 413 EEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSD--GVPPDIITYS 470

Query: 550 IVVDLLAK 557
           I++D L K
Sbjct: 471 ILLDGLCK 478



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 66/250 (26%), Positives = 106/250 (42%), Gaps = 36/250 (14%)

Query: 56  LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNI 115
           L+EA+  F  M      P + ++N L     K +  +  +  +R++   GL+ + +T N 
Sbjct: 377 LDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNT 436

Query: 116 LINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRL- 174
           LI       +GL        A  +FK M++ GV PD+ITY  L++G C+ G L  AL + 
Sbjct: 437 LI-------QGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVF 489

Query: 175 --------------HKKMVSGDYENGLIS--------------KTNIFSYSIIIDSLCKE 206
                         +  M+ G  + G +               K N+  Y+ +I   C++
Sbjct: 490 EYLQKSKMEPNIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRK 549

Query: 207 GLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTF 266
           GL ++A  LF EMK  G  P      TLI      G+      L  EM   G   +  T 
Sbjct: 550 GLKEEADALFREMKEDGTLPDSGCYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTI 609

Query: 267 NVMIDCLCKG 276
           +++I+ L  G
Sbjct: 610 SMVINMLHDG 619


>gi|11994279|dbj|BAB01462.1| unnamed protein product [Arabidopsis thaliana]
          Length = 648

 Score =  362 bits (928), Expect = 5e-97,   Method: Compositional matrix adjust.
 Identities = 203/570 (35%), Positives = 307/570 (53%), Gaps = 61/570 (10%)

Query: 46  HENCKSGIINL--NEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVS 103
            E  ++GI+++  N+A   F  M   +P P    FN L  AVA+ + YD V+ F + +  
Sbjct: 68  KERLRNGIVDIKVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMEL 127

Query: 104 IGLLPDFLTLNILINCFGNKER----------------------------GLCVENRIKE 135
            G+  D  T+ I+INC+  K++                            G C+E R+ E
Sbjct: 128 NGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSE 187

Query: 136 ATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLIS------ 189
           A  L   M+    RPD++T  TLING C  G +S AL L  +MV   ++   ++      
Sbjct: 188 AVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLN 247

Query: 190 -----------------------KTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINP 226
                                  K ++  YSI+IDSLCK+G  D A  LF EM+ +GI  
Sbjct: 248 RLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKA 307

Query: 227 AVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLL 286
            VV  ++LI G C  G W++   +  EM+     P+++TF+ +ID   K GK+ EA  L 
Sbjct: 308 DVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELY 367

Query: 287 ELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKI 346
             MI RG+ PD  TYNSL+DG+C    +  A ++F  M SKGC+  +V+Y+ILIN YCK 
Sbjct: 368 NEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKA 427

Query: 347 LNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTY 406
             V++ M L+R+I S G+    ITYNTL+ G  Q+G+   A++LF EM    V P + TY
Sbjct: 428 KRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTY 487

Query: 407 NILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQ 466
            IL+DGLC N  + +A+++F  ++ ++   GI I+N +I G+C A ++D+AW LF  L  
Sbjct: 488 GILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSD 547

Query: 467 KGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSK 526
           KG+ P VVTY++MI GLC+KG L +A+     M+++GC P+  T+N L+   L  +    
Sbjct: 548 KGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLIS 607

Query: 527 VVELLHKMAEPERNLVPDDTTFSIVVDLLA 556
            VEL+ +M         D +T  +V+D+L+
Sbjct: 608 SVELIEEMKVC--GFSADSSTIKMVIDMLS 635



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 94/330 (28%), Positives = 176/330 (53%), Gaps = 14/330 (4%)

Query: 234 LIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRG 293
           L+ GFC      E+NG+           ++ T  +MI+C C+  K+  A  +L    + G
Sbjct: 117 LVLGFC---KGMELNGI---------EHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLG 164

Query: 294 LNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAM 353
             PD  T+++L++G+CL GR+  A  +   M     +  +V+ + LING C    V EA+
Sbjct: 165 YEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEAL 224

Query: 354 SLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGL 413
            L  +++  G +   +TY  +L+ L ++G +  A  LF +M+  N++  +  Y+I+ID L
Sbjct: 225 VLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSL 284

Query: 414 CKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTV 473
           CK+    +A+ LF+ +EM   +  +  ++ LI GLC  G+ D+  ++  ++  + ++P V
Sbjct: 285 CKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDV 344

Query: 474 VTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHK 533
           VT+S +I    ++GKL +A +    M   G AP+ +T+N+L+ GF + N   +  ++   
Sbjct: 345 VTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDL 404

Query: 534 MAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
           M    +   PD  T+SI+++   K ++  +
Sbjct: 405 MV--SKGCEPDIVTYSILINSYCKAKRVDD 432



 Score =  149 bits (375), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 91/318 (28%), Positives = 160/318 (50%), Gaps = 2/318 (0%)

Query: 250 LFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYC 309
           LF  M+   P P  + FN +   + +  + +   G  + M   G+  D +T   +++ YC
Sbjct: 86  LFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYC 145

Query: 310 LVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVI 369
              ++  A  +       G +   ++++ L+NG+C    V EA++L  +++    R  ++
Sbjct: 146 RKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLV 205

Query: 370 TYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHML 429
           T +TL++GL   G+   A  L D M  Y  +PD  TY  +++ LCK+     A+ LF  +
Sbjct: 206 TVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKM 265

Query: 430 EMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKL 489
           E    +  +  ++ +ID LCK G  D+A  LF+++  KG+   VVTYS +I GLC  GK 
Sbjct: 266 EERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKW 325

Query: 490 EKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFS 549
           +     L  M      P+VVTF+ L+  F++  K  +  EL ++M    R + PD  T++
Sbjct: 326 DDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMI--TRGIAPDTITYN 383

Query: 550 IVVDLLAKDEKYHECSAV 567
            ++D   K+   HE + +
Sbjct: 384 SLIDGFCKENCLHEANQM 401



 Score =  132 bits (333), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 87/286 (30%), Positives = 138/286 (48%), Gaps = 2/286 (0%)

Query: 278 KINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYN 337
           K+N+A  L E MIQ    P    +N L        + D        M   G +H + +  
Sbjct: 79  KVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMT 138

Query: 338 ILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLY 397
           I+IN YC+   +  A S+  +    G     IT++TL++G    G+   A  L D M   
Sbjct: 139 IMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEM 198

Query: 398 NVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNA 457
              PDL T + LI+GLC    V EA+ L   +    F+     +  +++ LCK+G    A
Sbjct: 199 KQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALA 258

Query: 458 WELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHG 517
            +LF K+ ++ +  +VV YSI+I  LC+ G  + A      ME  G   +VVT+++L+ G
Sbjct: 259 LDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGG 318

Query: 518 FLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
              + K     ++L +M    RN++PD  TFS ++D+  K+ K  E
Sbjct: 319 LCNDGKWDDGAKMLREMI--GRNIIPDVVTFSALIDVFVKEGKLLE 362


>gi|224145829|ref|XP_002325779.1| predicted protein [Populus trichocarpa]
 gi|222862654|gb|EEF00161.1| predicted protein [Populus trichocarpa]
          Length = 586

 Score =  361 bits (927), Expect = 5e-97,   Method: Compositional matrix adjust.
 Identities = 194/531 (36%), Positives = 307/531 (57%), Gaps = 37/531 (6%)

Query: 46  HENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNR-HYDAVISFYRKLVSI 104
           +++  S   N+++A   F +M H +P P I  FN L  A+ + R +YDAVIS  +++   
Sbjct: 61  NDDASSSFRNIDDALASFNHMLHRKPLPCIIQFNKLLSAIVRMRQYYDAVISLSKQMELA 120

Query: 105 GLLPDFLTLNILINCFGNKER----------------------------GLCVENRIKEA 136
           GL P+  TLNILINCF   +                             GLC      +A
Sbjct: 121 GLSPNTCTLNILINCFCLMQHVDLGFSVLAKVIKLGLQPTIITFTTLINGLCKAGEFAQA 180

Query: 137 TWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSY 196
             LF +M+A G +PDV TY T+ING C+ G  + A  L KKM        +  + ++ +Y
Sbjct: 181 LELFDDMVARGCQPDVYTYTTIINGLCKMGETAAAAGLIKKM------GEVGCQPDVVTY 234

Query: 197 SIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLD 256
           S +IDSLCK+ LV++A ++F  MK +GI+P VV  T+LI G C    W+E + +  EM  
Sbjct: 235 STLIDSLCKDRLVNEALDIFSYMKAKGISPTVVSYTSLIQGLCSFSRWKEASAMLNEMTS 294

Query: 257 LGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDT 316
           L   P+++TF+++ID  CK G + EA G+L+ M + G+ P+  TYNSLM GY L   +  
Sbjct: 295 LNIMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNVITYNSLMHGYSLQMEVVE 354

Query: 317 AREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLS 376
           AR++F  M ++GCK  V SY+ILINGYC +  ++EA  L+ ++I  G+    ++Y TL+ 
Sbjct: 355 ARKLFDVMITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNTVSYTTLIH 414

Query: 377 GLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEF 436
              Q G+   A++LF +M      PDL TY++L++G CK   + +A +LF  ++    + 
Sbjct: 415 AFCQLGKLREARELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFRAMQGTYLKP 474

Query: 437 GIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFL 496
            + ++  LID +CK+G L++A +LF +L   GL P V  Y+ +I+GLC++G L++A +  
Sbjct: 475 NLVMYTILIDSMCKSGNLNHARKLFSELFVHGLQPDVQIYTTIINGLCKEGLLDEALEAF 534

Query: 497 LYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTT 547
             ME++GC PN  ++N ++ GFLQ+   S+ V+L+ +M   ++  V D+ T
Sbjct: 535 RKMEEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMR--DKGFVADEGT 583



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 103/348 (29%), Positives = 178/348 (51%), Gaps = 2/348 (0%)

Query: 210 DKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVM 269
           D    L  +M+  G++P       LI+ FC   + +    +  +++ LG +P ++TF  +
Sbjct: 108 DAVISLSKQMELAGLSPNTCTLNILINCFCLMQHVDLGFSVLAKVIKLGLQPTIITFTTL 167

Query: 270 IDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGC 329
           I+ LCK G+  +A  L + M+ RG  PD +TY ++++G C +G    A  +   M   GC
Sbjct: 168 INGLCKAGEFAQALELFDDMVARGCQPDVYTYTTIINGLCKMGETAAAAGLIKKMGEVGC 227

Query: 330 KHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQK 389
           +  VV+Y+ LI+  CK   V EA+ ++  + + G+  TV++Y +L+ GL    +   A  
Sbjct: 228 QPDVVTYSTLIDSLCKDRLVNEALDIFSYMKAKGISPTVVSYTSLIQGLCSFSRWKEASA 287

Query: 390 LFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLC 449
           + +EM   N+ PD+ T+++LID  CK   V EA  +   +     E  +  +N L+ G  
Sbjct: 288 MLNEMTSLNIMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNVITYNSLMHGYS 347

Query: 450 KAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVV 509
               +  A +LF  +  +G  P V +YSI+I+G C   ++++A      M   G  PN V
Sbjct: 348 LQMEVVEARKLFDVMITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNTV 407

Query: 510 TFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAK 557
           ++ TL+H F Q  K  +  EL   M       +PD  T+S++++   K
Sbjct: 408 SYTTLIHAFCQLGKLREARELFKDMH--TNGYLPDLCTYSVLLEGFCK 453



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 108/420 (25%), Positives = 184/420 (43%), Gaps = 73/420 (17%)

Query: 209 VDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNW-EEVNGLFIEMLDLGPRPNLLTFN 267
           +D A   F  M  R   P ++    L+        + + V  L  +M   G  PN  T N
Sbjct: 71  IDDALASFNHMLHRKPLPCIIQFNKLLSAIVRMRQYYDAVISLSKQMELAGLSPNTCTLN 130

Query: 268 VMIDC-----------------------------------LCKGGKINEANGLLELMIQR 292
           ++I+C                                   LCK G+  +A  L + M+ R
Sbjct: 131 ILINCFCLMQHVDLGFSVLAKVIKLGLQPTIITFTTLINGLCKAGEFAQALELFDDMVAR 190

Query: 293 GLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEA 352
           G  PD +TY ++++G C +G    A  +   M   GC+  VV+Y+ LI+  CK   V EA
Sbjct: 191 GCQPDVYTYTTIINGLCKMGETAAAAGLIKKMGEVGCQPDVVTYSTLIDSLCKDRLVNEA 250

Query: 353 MSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDG 412
           + ++  + + G+  TV++Y +L+ GL    +   A  + +EM   N+ PD+ T+++LID 
Sbjct: 251 LDIFSYMKAKGISPTVVSYTSLIQGLCSFSRWKEASAMLNEMTSLNIMPDIVTFSLLIDI 310

Query: 413 LCKNNCVQEAVKLFHMLE--------------MNKFEFGIEI------------------ 440
            CK   V EA  +   +               M+ +   +E+                  
Sbjct: 311 FCKEGNVLEAQGVLKTMTEMGVEPNVITYNSLMHGYSLQMEVVEARKLFDVMITRGCKPD 370

Query: 441 ---FNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLL 497
              ++ LI+G C   R+D A +LF+++  +GL P  V+Y+ +IH  C+ GKL +A +   
Sbjct: 371 VFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNTVSYTTLIHAFCQLGKLREARELFK 430

Query: 498 YMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAK 557
            M  NG  P++ T++ L+ GF +     K   L   M      L P+   ++I++D + K
Sbjct: 431 DMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFRAMQGT--YLKPNLVMYTILIDSMCK 488


>gi|15228763|ref|NP_188886.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75223290|sp|Q6NQ83.1|PP247_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g22470, mitochondrial; Flags: Precursor
 gi|34365775|gb|AAQ65199.1| At3g22470 [Arabidopsis thaliana]
 gi|51968798|dbj|BAD43091.1| hypothetical protein [Arabidopsis thaliana]
 gi|332643122|gb|AEE76643.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 619

 Score =  361 bits (927), Expect = 5e-97,   Method: Compositional matrix adjust.
 Identities = 203/570 (35%), Positives = 307/570 (53%), Gaps = 61/570 (10%)

Query: 46  HENCKSGIINL--NEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVS 103
            E  ++GI+++  N+A   F  M   +P P    FN L  AVA+ + YD V+ F + +  
Sbjct: 39  KERLRNGIVDIKVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMEL 98

Query: 104 IGLLPDFLTLNILINCFGNKER----------------------------GLCVENRIKE 135
            G+  D  T+ I+INC+  K++                            G C+E R+ E
Sbjct: 99  NGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSE 158

Query: 136 ATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLIS------ 189
           A  L   M+    RPD++T  TLING C  G +S AL L  +MV   ++   ++      
Sbjct: 159 AVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLN 218

Query: 190 -----------------------KTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINP 226
                                  K ++  YSI+IDSLCK+G  D A  LF EM+ +GI  
Sbjct: 219 RLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKA 278

Query: 227 AVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLL 286
            VV  ++LI G C  G W++   +  EM+     P+++TF+ +ID   K GK+ EA  L 
Sbjct: 279 DVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELY 338

Query: 287 ELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKI 346
             MI RG+ PD  TYNSL+DG+C    +  A ++F  M SKGC+  +V+Y+ILIN YCK 
Sbjct: 339 NEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKA 398

Query: 347 LNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTY 406
             V++ M L+R+I S G+    ITYNTL+ G  Q+G+   A++LF EM    V P + TY
Sbjct: 399 KRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTY 458

Query: 407 NILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQ 466
            IL+DGLC N  + +A+++F  ++ ++   GI I+N +I G+C A ++D+AW LF  L  
Sbjct: 459 GILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSD 518

Query: 467 KGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSK 526
           KG+ P VVTY++MI GLC+KG L +A+     M+++GC P+  T+N L+   L  +    
Sbjct: 519 KGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLIS 578

Query: 527 VVELLHKMAEPERNLVPDDTTFSIVVDLLA 556
            VEL+ +M         D +T  +V+D+L+
Sbjct: 579 SVELIEEMKVC--GFSADSSTIKMVIDMLS 606



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 94/330 (28%), Positives = 176/330 (53%), Gaps = 14/330 (4%)

Query: 234 LIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRG 293
           L+ GFC      E+NG+           ++ T  +MI+C C+  K+  A  +L    + G
Sbjct: 88  LVLGFC---KGMELNGI---------EHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLG 135

Query: 294 LNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAM 353
             PD  T+++L++G+CL GR+  A  +   M     +  +V+ + LING C    V EA+
Sbjct: 136 YEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEAL 195

Query: 354 SLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGL 413
            L  +++  G +   +TY  +L+ L ++G +  A  LF +M+  N++  +  Y+I+ID L
Sbjct: 196 VLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSL 255

Query: 414 CKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTV 473
           CK+    +A+ LF+ +EM   +  +  ++ LI GLC  G+ D+  ++  ++  + ++P V
Sbjct: 256 CKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDV 315

Query: 474 VTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHK 533
           VT+S +I    ++GKL +A +    M   G AP+ +T+N+L+ GF + N   +  ++   
Sbjct: 316 VTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDL 375

Query: 534 MAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
           M    +   PD  T+SI+++   K ++  +
Sbjct: 376 MV--SKGCEPDIVTYSILINSYCKAKRVDD 403



 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 91/314 (28%), Positives = 158/314 (50%), Gaps = 2/314 (0%)

Query: 250 LFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYC 309
           LF  M+   P P  + FN +   + +  + +   G  + M   G+  D +T   +++ YC
Sbjct: 57  LFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYC 116

Query: 310 LVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVI 369
              ++  A  +       G +   ++++ L+NG+C    V EA++L  +++    R  ++
Sbjct: 117 RKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLV 176

Query: 370 TYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHML 429
           T +TL++GL   G+   A  L D M  Y  +PD  TY  +++ LCK+     A+ LF  +
Sbjct: 177 TVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKM 236

Query: 430 EMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKL 489
           E    +  +  ++ +ID LCK G  D+A  LF+++  KG+   VVTYS +I GLC  GK 
Sbjct: 237 EERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKW 296

Query: 490 EKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFS 549
           +     L  M      P+VVTF+ L+  F++  K  +  EL ++M    R + PD  T++
Sbjct: 297 DDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMI--TRGIAPDTITYN 354

Query: 550 IVVDLLAKDEKYHE 563
            ++D   K+   HE
Sbjct: 355 SLIDGFCKENCLHE 368



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 87/286 (30%), Positives = 138/286 (48%), Gaps = 2/286 (0%)

Query: 278 KINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYN 337
           K+N+A  L E MIQ    P    +N L        + D        M   G +H + +  
Sbjct: 50  KVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMT 109

Query: 338 ILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLY 397
           I+IN YC+   +  A S+  +    G     IT++TL++G    G+   A  L D M   
Sbjct: 110 IMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEM 169

Query: 398 NVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNA 457
              PDL T + LI+GLC    V EA+ L   +    F+     +  +++ LCK+G    A
Sbjct: 170 KQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALA 229

Query: 458 WELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHG 517
            +LF K+ ++ +  +VV YSI+I  LC+ G  + A      ME  G   +VVT+++L+ G
Sbjct: 230 LDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGG 289

Query: 518 FLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
              + K     ++L +M    RN++PD  TFS ++D+  K+ K  E
Sbjct: 290 LCNDGKWDDGAKMLREMI--GRNIIPDVVTFSALIDVFVKEGKLLE 333


>gi|356510925|ref|XP_003524184.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 594

 Score =  361 bits (927), Expect = 5e-97,   Method: Compositional matrix adjust.
 Identities = 204/554 (36%), Positives = 301/554 (54%), Gaps = 38/554 (6%)

Query: 36  SPETQLNEFLHENCKSGII-NLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAV 94
           S  TQL   +   C SG + N++EA   F  M  M+P P +  F LL GA+ + +HY   
Sbjct: 36  SNGTQLLISMRNLCWSGKLKNIDEALDLFQGMARMKPLPSVKDFTLLLGAIVRLKHYTTA 95

Query: 95  ISFYRKLVS-IGLLPDFLTLNILINCFGNKE----------------------------R 125
           IS  + + S +G+  D +TLNI+INC    +                             
Sbjct: 96  ISLVKHMFSSLGIEADTITLNIVINCLCRLKLVAFGFSVLGTMFKLGLEPTVMTLTTLIN 155

Query: 126 GLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYEN 185
           GLCV+  + +A  L  +M       DV TYG LING C+TG+   A+   +KM   ++  
Sbjct: 156 GLCVQGNVAQAVGLADHMEKMWYPLDVYTYGVLINGLCKTGDTLAAVGWLRKMEERNW-- 213

Query: 186 GLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWE 245
               K N+  YS I+D LCK+GLV +A  L  EM G+G+ P +V    LI G C  G W+
Sbjct: 214 ----KPNVVVYSTIMDGLCKDGLVSEALNLCSEMNGKGVRPNLVTYACLIQGLCNFGRWK 269

Query: 246 EVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLM 305
           E   L  EM+ +G RP+L   N+++D  CK GK+ +A  ++  MI  G  PD FTYNSL+
Sbjct: 270 EAGSLLDEMMKMGMRPDLQMLNILVDAFCKEGKVMQAKSVIGFMILTGEGPDVFTYNSLI 329

Query: 306 DGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVR 365
             YCL  +++ A  +F  M S+G    +V +  LI+G+CK  N+ +AM L  ++   G  
Sbjct: 330 HIYCLQNKMNEAMRVFHLMVSRGRLPDIVVFTSLIHGWCKDKNINKAMHLLEEMSKMGFV 389

Query: 366 QTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKL 425
             V T+ TL+ G  QAG+   A++LF  M  Y   P+L T  +++DGLCK N + EAV L
Sbjct: 390 PDVATWTTLIGGFCQAGRPLAAKELFLNMHKYGQVPNLQTCAVILDGLCKENLLSEAVSL 449

Query: 426 FHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCR 485
              +E +  +  I I++ L+DG+C AG+L+ AWELF  LP KGL   V  Y+IMI GLC+
Sbjct: 450 AKAMEKSNLDLNIVIYSILLDGMCSAGKLNAAWELFSSLPGKGLQINVYIYTIMIKGLCK 509

Query: 486 KGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDD 545
           +G L+KA D L+ ME+NGC PN  T+N  + G L   + ++ ++ L  M   ++    D 
Sbjct: 510 QGSLDKAEDLLINMEENGCLPNNCTYNVFVQGLLTKKEIARSIKYLTIMR--DKGFSVDA 567

Query: 546 TTFSIVVDLLAKDE 559
            T   +++ L+ +E
Sbjct: 568 ATTEFIINYLSTNE 581



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 117/434 (26%), Positives = 193/434 (44%), Gaps = 47/434 (10%)

Query: 189 SKTNIFSYSIIIDSLCKEGL---VDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWE 245
           S +N     I + +LC  G    +D+A +LF  M      P+V   T L+       ++ 
Sbjct: 34  SHSNGTQLLISMRNLCWSGKLKNIDEALDLFQGMARMKPLPSVKDFTLLLGAIVRLKHYT 93

Query: 246 EVNGLFIEMLD-LGPRPNLLTFNVMIDCLCK----------------------------- 275
               L   M   LG   + +T N++I+CLC+                             
Sbjct: 94  TAISLVKHMFSSLGIEADTITLNIVINCLCRLKLVAFGFSVLGTMFKLGLEPTVMTLTTL 153

Query: 276 ------GGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGC 329
                  G + +A GL + M +     D +TY  L++G C  G    A      M  +  
Sbjct: 154 INGLCVQGNVAQAVGLADHMEKMWYPLDVYTYGVLINGLCKTGDTLAAVGWLRKMEERNW 213

Query: 330 KHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQK 389
           K  VV Y+ +++G CK   V EA++L  ++   GVR  ++TY  L+ GL   G+   A  
Sbjct: 214 KPNVVVYSTIMDGLCKDGLVSEALNLCSEMNGKGVRPNLVTYACLIQGLCNFGRWKEAGS 273

Query: 390 LFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLC 449
           L DEM    + PDL   NIL+D  CK   V +A  +   + +      +  +N LI   C
Sbjct: 274 LLDEMMKMGMRPDLQMLNILVDAFCKEGKVMQAKSVIGFMILTGEGPDVFTYNSLIHIYC 333

Query: 450 KAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVV 509
              +++ A  +FH +  +G +P +V ++ +IHG C+   + KA   L  M K G  P+V 
Sbjct: 334 LQNKMNEAMRVFHLMVSRGRLPDIVVFTSLIHGWCKDKNINKAMHLLEEMSKMGFVPDVA 393

Query: 510 TFNTLMHGFLQNNKTSKVVEL---LHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSA 566
           T+ TL+ GF Q  +     EL   +HK  +     VP+  T ++++D L K+    E  +
Sbjct: 394 TWTTLIGGFCQAGRPLAAKELFLNMHKYGQ-----VPNLQTCAVILDGLCKENLLSEAVS 448

Query: 567 VSKSSYRACLYVTI 580
           ++K+  ++ L + I
Sbjct: 449 LAKAMEKSNLDLNI 462


>gi|224130706|ref|XP_002328356.1| predicted protein [Populus trichocarpa]
 gi|222838071|gb|EEE76436.1| predicted protein [Populus trichocarpa]
          Length = 613

 Score =  361 bits (926), Expect = 8e-97,   Method: Compositional matrix adjust.
 Identities = 199/485 (41%), Positives = 287/485 (59%), Gaps = 15/485 (3%)

Query: 75  ISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIK 134
           + S N+L   + +  H D  +S   K+  +G+ PD +T N LIN       GLC E +IK
Sbjct: 128 VYSLNILINCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNALIN-------GLCNEGKIK 180

Query: 135 EATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIF 194
           EA  LF  M+  G  P+VI+Y T+ING C+TGN S+A+ + KKM     +NG   K N+ 
Sbjct: 181 EAVELFNEMVKRGHEPNVISYTTVINGLCKTGNTSMAVDVFKKM----EQNG--CKPNVV 234

Query: 195 SYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEM 254
           +YS IIDSLCK+ LV+ A E   EM  RGI P V    +++HGFC  G   E   LF EM
Sbjct: 235 TYSTIIDSLCKDRLVNDAMEFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEM 294

Query: 255 LDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRI 314
           +     PN +TF +++D LCK G ++EA  + E M ++G+ PD  TYN+LMDGYCL   +
Sbjct: 295 VGRDVMPNTVTFTILVDGLCKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLM 354

Query: 315 DTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTL 374
           + A+++F  M  KGC     SYNILINGYCK   ++EA SL  ++    +    +TY+TL
Sbjct: 355 NEAKKVFEIMIRKGCAPGAHSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTL 414

Query: 375 LSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKF 434
           + GL Q G+   A  LF EM  Y   P+L TY IL+DG CK+  + EA+KL   ++  K 
Sbjct: 415 MQGLCQLGRPKEALNLFKEMCSYGPHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKL 474

Query: 435 EFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKAND 494
           E  I  +  LI+G+  AG+L+ A ELF KL   G  P + TY++MI GL ++G  ++A D
Sbjct: 475 EPNIVHYTILIEGMFIAGKLEVAKELFSKLFGDGTRPDIRTYTVMIKGLLKEGLSDEAYD 534

Query: 495 FLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDL 554
               ME +G  PN  ++N ++ GFLQN  +S  + L+ +M    +    + +TF +++DL
Sbjct: 535 LFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEMV--GKRFSVNLSTFQMLLDL 592

Query: 555 LAKDE 559
            ++DE
Sbjct: 593 ESQDE 597



 Score =  224 bits (572), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 131/433 (30%), Positives = 225/433 (51%), Gaps = 14/433 (3%)

Query: 122 NKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSG 181
           N    +CV+    +A   F  M+    RP V+ +G  +  F +    S  + L  +M   
Sbjct: 67  NNSNNVCVD----DALASFYRMVRINPRPSVVEFGKFLGSFAKKKQYSTVVSLCNQM--- 119

Query: 182 DYENGLISKT-NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCC 240
                L   T N++S +I+I+ LC+   VD +  +  +M   GI+P  +    LI+G C 
Sbjct: 120 ----DLFRVTHNVYSLNILINCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCN 175

Query: 241 AGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFT 300
            G  +E   LF EM+  G  PN++++  +I+ LCK G  + A  + + M Q G  P+  T
Sbjct: 176 EGKIKEAVELFNEMVKRGHEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVT 235

Query: 301 YNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQII 360
           Y++++D  C    ++ A E    M  +G    V +YN +++G+C +  + EA  L+++++
Sbjct: 236 YSTIIDSLCKDRLVNDAMEFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMV 295

Query: 361 SNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQ 420
              V    +T+  L+ GL + G    A+ +F+ M    VEPD+STYN L+DG C    + 
Sbjct: 296 GRDVMPNTVTFTILVDGLCKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMN 355

Query: 421 EAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMI 480
           EA K+F ++       G   +N LI+G CK+ R+D A  L  ++  K L P  VTYS ++
Sbjct: 356 EAKKVFEIMIRKGCAPGAHSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLM 415

Query: 481 HGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERN 540
            GLC+ G+ ++A +    M   G  PN+VT+  L+ GF ++    + ++LL  M   E+ 
Sbjct: 416 QGLCQLGRPKEALNLFKEMCSYGPHPNLVTYVILLDGFCKHGHLDEALKLLKSMK--EKK 473

Query: 541 LVPDDTTFSIVVD 553
           L P+   ++I+++
Sbjct: 474 LEPNIVHYTILIE 486



 Score =  125 bits (313), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 77/254 (30%), Positives = 128/254 (50%), Gaps = 2/254 (0%)

Query: 314 IDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNT 373
           +D A   F  M     + +VV +   +  + K       +SL  Q+    V   V + N 
Sbjct: 74  VDDALASFYRMVRINPRPSVVEFGKFLGSFAKKKQYSTVVSLCNQMDLFRVTHNVYSLNI 133

Query: 374 LLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNK 433
           L++ L +     ++  +  +M    + PD  T+N LI+GLC    ++EAV+LF+ +    
Sbjct: 134 LINCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRG 193

Query: 434 FEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKAN 493
            E  +  +  +I+GLCK G    A ++F K+ Q G  P VVTYS +I  LC+   +  A 
Sbjct: 194 HEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAM 253

Query: 494 DFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
           +FL  M + G  PNV T+N+++HGF    + ++   L  +M    R+++P+  TF+I+VD
Sbjct: 254 EFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVG--RDVMPNTVTFTILVD 311

Query: 554 LLAKDEKYHECSAV 567
            L K+    E   V
Sbjct: 312 GLCKEGMVSEARLV 325


>gi|15221282|ref|NP_172694.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122242333|sp|Q0WKV3.1|PPR36_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g12300, mitochondrial; Flags: Precursor
 gi|110741411|dbj|BAF02254.1| hypothetical protein [Arabidopsis thaliana]
 gi|332190743|gb|AEE28864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 637

 Score =  360 bits (925), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 201/570 (35%), Positives = 310/570 (54%), Gaps = 61/570 (10%)

Query: 46  HENCKSGIINL--NEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVS 103
            E  +SG++++  ++A   F  M H +P P +  F+ LF A+AK + YD V++  +++  
Sbjct: 57  RERLRSGLVDIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMEL 116

Query: 104 IGLLPDFLTLNILINCFGNKER----------------------------GLCVENRIKE 135
            G+  +  TL+I+INCF    +                            GLC+E R+ E
Sbjct: 117 KGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSE 176

Query: 136 ATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLIS------ 189
           A  L   M+  G +PD+IT  TL+NG C +G  + A+ L  KMV    +   ++      
Sbjct: 177 ALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLN 236

Query: 190 -----------------------KTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINP 226
                                  K +   YSIIID LCK G +D A  LF EM+ +GI  
Sbjct: 237 VMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITT 296

Query: 227 AVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLL 286
            ++    LI GFC AG W++   L  +M+     PN++TF+V+ID   K GK+ EA  L 
Sbjct: 297 NIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELH 356

Query: 287 ELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKI 346
           + MI RG+ PD  TY SL+DG+C    +D A ++   M SKGC   + ++NILINGYCK 
Sbjct: 357 KEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKA 416

Query: 347 LNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTY 406
             +++ + L+R++   GV    +TYNTL+ G  + G+   A++LF EM    V P++ TY
Sbjct: 417 NRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTY 476

Query: 407 NILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQ 466
            IL+DGLC N   ++A+++F  +E +K E  I I+N +I G+C A ++D+AW+LF  LP 
Sbjct: 477 KILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPL 536

Query: 467 KGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSK 526
           KG+ P V TY+IMI GLC+KG L +A      ME++G AP+  T+N L+   L +   +K
Sbjct: 537 KGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATK 596

Query: 527 VVELLHKMAEPERNLVPDDTTFSIVVDLLA 556
            V+L+ ++         D +T  +V+D+L+
Sbjct: 597 SVKLIEELKRC--GFSVDASTIKMVIDMLS 624



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 62/251 (24%), Positives = 106/251 (42%), Gaps = 36/251 (14%)

Query: 55  NLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLN 114
           +L++A      M      P I +FN+L     K    D  +  +RK+   G++ D +T N
Sbjct: 383 HLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYN 442

Query: 115 ILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRL 174
            LI       +G C   ++  A  LF+ M++  V P+++TY  L++G C  G    AL +
Sbjct: 443 TLI-------QGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEI 495

Query: 175 HKKMVSGDYE----------NGLIS-------------------KTNIFSYSIIIDSLCK 205
            +K+     E          +G+ +                   K  + +Y+I+I  LCK
Sbjct: 496 FEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCK 555

Query: 206 EGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLT 265
           +G + +A+ LF +M+  G  P       LI      G+  +   L  E+   G   +  T
Sbjct: 556 KGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDAST 615

Query: 266 FNVMIDCLCKG 276
             ++ID L  G
Sbjct: 616 IKMVIDMLSDG 626


>gi|224130702|ref|XP_002328355.1| predicted protein [Populus trichocarpa]
 gi|222838070|gb|EEE76435.1| predicted protein [Populus trichocarpa]
          Length = 608

 Score =  359 bits (922), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 200/534 (37%), Positives = 302/534 (56%), Gaps = 36/534 (6%)

Query: 54  INLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTL 113
           I++++A   F  M  M P P ++ F    G+ AK + Y  V+S   ++   G+  +  +L
Sbjct: 67  ISIDDALASFYRMVRMNPRPSVAEFGKFLGSFAKKKQYSTVVSLCNQMDLFGVTHNVYSL 126

Query: 114 NILINC----------------------------FGNKERGLCVENRIKEATWLFKNMIA 145
           N+LINC                            F     GLC E +IKEA  LF  M+ 
Sbjct: 127 NVLINCLCRLNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMVR 186

Query: 146 FGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCK 205
            G  P+VI+Y T+ING C+TGN S+A+ + KKM     +NG   K ++ +Y+ IIDSLCK
Sbjct: 187 RGHEPNVISYNTIINGLCKTGNTSMAVDVFKKM----EQNG--CKPDVVTYNTIIDSLCK 240

Query: 206 EGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLT 265
           + LV+ A E   EM  RGI P V     ++HGFC  G   E   LF EM+     P+ +T
Sbjct: 241 DRLVNDAMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVT 300

Query: 266 FNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMH 325
             +++D LCK G ++EA  + E M ++G+ P+  TYN+LMDGYCL   ++ A+++F  M 
Sbjct: 301 LTILVDGLCKEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVFEIMI 360

Query: 326 SKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAG 385
            +GC   V SYNILING+CK   ++EA SL  ++    +    +TY+TL+ GL Q G+  
Sbjct: 361 RQGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPK 420

Query: 386 YAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLI 445
            A  +F EM  Y + P+L TY+IL+DG CK+  + EA+KL   ++  K E  I     LI
Sbjct: 421 EALNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQEKKLEPNIVHHTILI 480

Query: 446 DGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCA 505
           +G+  AG+L+ A ELF KL   G+ PT+ TY++MI GL ++G  ++A D    ME +G  
Sbjct: 481 EGMFIAGKLEVAKELFSKLFADGIRPTIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFL 540

Query: 506 PNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDE 559
           PN  ++N ++ GFLQN  +S  + L+ +M    +    + +TF +++DL ++DE
Sbjct: 541 PNSCSYNVMIQGFLQNQDSSTAIRLIDEMV--GKRFSANLSTFQMLLDLESQDE 592



 Score =  205 bits (521), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 131/439 (29%), Positives = 206/439 (46%), Gaps = 45/439 (10%)

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKT- 191
           I +A   F  M+    RP V  +G  +  F +    S  + L  +M        L   T 
Sbjct: 69  IDDALASFYRMVRMNPRPSVAEFGKFLGSFAKKKQYSTVVSLCNQM-------DLFGVTH 121

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
           N++S +++I+ LC+   VD A  +     G+                             
Sbjct: 122 NVYSLNVLINCLCRLNHVDFAVSIL----GK----------------------------- 148

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
             M  LG  P   TFN +I+ LC  GKI EA  L   M++RG  P+  +YN++++G C  
Sbjct: 149 --MFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMVRRGHEPNVISYNTIINGLCKT 206

Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
           G    A ++F  M   GCK  VV+YN +I+  CK   V +AM    +++  G+   V TY
Sbjct: 207 GNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDAMEFLSEMLDRGIPPNVFTY 266

Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
           N ++ G    GQ   A +LF EM   +V PD  T  IL+DGLCK   V EA  +F  +  
Sbjct: 267 NCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILVDGLCKEGMVSEARLVFETMTE 326

Query: 432 NKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEK 491
              E  I  +N L+DG C    ++ A ++F  + ++G  P V +Y+I+I+G C+  ++++
Sbjct: 327 KGVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQGCAPGVHSYNILINGFCKSRRMDE 386

Query: 492 ANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIV 551
           A   L  M      P+ VT++TLM G  Q  +  + + +  +M      L+P+  T+SI+
Sbjct: 387 AKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKEALNIFKEMC--SYGLLPNLVTYSIL 444

Query: 552 VDLLAKDEKYHECSAVSKS 570
           +D   K     E   + KS
Sbjct: 445 LDGFCKHGHLDEALKLLKS 463



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 94/341 (27%), Positives = 171/341 (50%), Gaps = 14/341 (4%)

Query: 251 FIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCL 310
           F  M+ + PRP++  F   +    K  + +    L   M   G+  + ++ N L++  C 
Sbjct: 76  FYRMVRMNPRPSVAEFGKFLGSFAKKKQYSTVVSLCNQMDLFGVTHNVYSLNVLINCLCR 135

Query: 311 VGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVIT 370
           +  +D A  I   M   G   T  ++N LING C    ++EA+ L+ +++  G    VI+
Sbjct: 136 LNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMVRRGHEPNVIS 195

Query: 371 YNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLE 430
           YNT+++GL + G    A  +F +M+    +PD+ TYN +ID LCK+  V +A++    + 
Sbjct: 196 YNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDAMEFLSEML 255

Query: 431 MNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLE 490
                  +  +NC++ G C  G+L+ A  LF ++  + ++P  VT +I++ GLC++G + 
Sbjct: 256 DRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILVDGLCKEGMVS 315

Query: 491 KANDFLLYMEKNGCAPNVVTFNTLMHGF-LQN--NKTSKVVELLHKMAEPERNLVPDDTT 547
           +A      M + G  PN+ T+N LM G+ LQ   N+  KV E++ +     +   P   +
Sbjct: 316 EARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIR-----QGCAPGVHS 370

Query: 548 FSIVVDLLAKDEKYHECSAVSKSSYRACL------YVTIFQ 582
           ++I+++   K  +  E  ++    Y   L      Y T+ Q
Sbjct: 371 YNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQ 411


>gi|22128587|gb|AAM52339.1| fertility restorer [Petunia x hybrida]
          Length = 592

 Score =  358 bits (920), Expect = 3e-96,   Method: Compositional matrix adjust.
 Identities = 196/546 (35%), Positives = 312/546 (57%), Gaps = 43/546 (7%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
           NEF +  C      L++A   F  M   +P P   SF+ L  A+   +HY +V+S +R++
Sbjct: 45  NEFENVKC------LDDAFSLFRQMVTTKPLPSAVSFSKLLKALVHMKHYSSVVSIFREI 98

Query: 102 VSIGLLPDFLTLNILIN----------------------------CFGNKERGLCVENRI 133
             + +  D   L+ ++N                             F    RGL  EN++
Sbjct: 99  HKLRIPVDAFALSTVVNSCCLMHRTDLGFSVLAIHFKKGIPYNEVTFTTLIRGLFAENKV 158

Query: 134 KEATWLFKNMIAFGV-RPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
           K+A  LFK ++   +  PD + YGT+++G C+ G+   A  L + M  G      I+K +
Sbjct: 159 KDAVHLFKKLVRENICEPDEVMYGTVMDGLCKKGHTQKAFDLLRLMEQG------ITKPD 212

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
              Y+I+ID+ CK+G++D A  L  EMK + I P ++  T+LI G      WE+V  LF+
Sbjct: 213 TCIYNIVIDAFCKDGMLDGATSLLNEMKQKNIPPDIITYTSLIDGLGKLSQWEKVRTLFL 272

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
           EM+ L   P++ TFN +ID LCK GK+ +A  ++  MI++G+ P+  TYN +MDGYCL G
Sbjct: 273 EMIHLNIYPDVCTFNSVIDGLCKEGKVEDAEEIMTYMIEKGVEPNEITYNVVMDGYCLRG 332

Query: 313 RIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYN 372
           ++  AR IF SM  KG +  ++SY  LINGY +   +++AM L+R+I  NG++ +++T +
Sbjct: 333 QMGRARRIFDSMIDKGIEPDIISYTALINGYVEKKKMDKAMQLFREISQNGLKPSIVTCS 392

Query: 373 TLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMN 432
            LL GLF+ G+   A+  FDEM+     P+L T+  L+ G  KN  V+EA+  FH LE  
Sbjct: 393 VLLRGLFEVGRTECAKIFFDEMQAAGHIPNLYTHCTLLGGYFKNGLVEEAMSHFHKLERR 452

Query: 433 KFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKA 492
           + +  I+I+  +I+GLCK G+LD A   F KLP  GL P V+TY+ MI G C++G L++A
Sbjct: 453 REDTNIQIYTAVINGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEA 512

Query: 493 NDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVV 552
            D L  ME NGC P+  T+N ++ GF +++K S++   L ++A   ++   +  T  +++
Sbjct: 513 KDMLRKMEDNGCLPDNRTYNVIVRGFFRSSKVSEMKAFLKEIA--GKSFSFEAATVELLM 570

Query: 553 DLLAKD 558
           D++A+D
Sbjct: 571 DIIAED 576


>gi|224092336|ref|XP_002309564.1| predicted protein [Populus trichocarpa]
 gi|222855540|gb|EEE93087.1| predicted protein [Populus trichocarpa]
          Length = 593

 Score =  358 bits (920), Expect = 4e-96,   Method: Compositional matrix adjust.
 Identities = 195/511 (38%), Positives = 298/511 (58%), Gaps = 35/511 (6%)

Query: 55  NLNEARYFFGYMTHMQPSPPISSFNLLFGAVAK-NRHYDAVISFYRKLVSIGLLPDFLTL 113
           N+++A   F +M H +P P I  F  L  A+ K  ++YD VIS  +++   GL P+  TL
Sbjct: 77  NIDDALASFNHMLHRKPLPCIIQFTKLLSAIVKMGQYYDTVISLTKQMELAGLSPNIYTL 136

Query: 114 NILINCFGNKER----------------------------GLCVENRIKEATWLFKNMIA 145
           +ILINCF + +R                             LC   +  +A  LF +M+A
Sbjct: 137 SILINCFSHLQRVDLAFSVLAKIIKLGLQPTIVTFTTLINWLCKVGKFAQAMELFDDMVA 196

Query: 146 FGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCK 205
            G RPDV TY T+ING C+ G  + A  L KKM     E G   + N+ +YS IIDS  K
Sbjct: 197 RGCRPDVYTYTTIINGLCKIGETAAAAGLLKKM----EEAG--CQPNVVTYSTIIDSHRK 250

Query: 206 EGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLT 265
           +  V++A ++F  MK +GI+P +    +LI G C    W+E + L  EM  L   P+++T
Sbjct: 251 DRRVNEALDIFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVT 310

Query: 266 FNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMH 325
           FNV++D +CK GK++EA G+L+ M + G+ PD  TY+SLM GY L   +  AR++F +M 
Sbjct: 311 FNVLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMI 370

Query: 326 SKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAG 385
           +KGCK  V SYNILINGYCK+  ++EA  L+ ++I  G+    ++YNTL+ GL Q G   
Sbjct: 371 TKGCKPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLR 430

Query: 386 YAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLI 445
            A+ LF  M      P+L TY+IL+DG CK     +A +LF  ++    +  + ++N LI
Sbjct: 431 EARNLFKNMHTNGNLPNLFTYSILLDGFCKQGYFGKAFRLFRAMQSTYSKPNLVMYNILI 490

Query: 446 DGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCA 505
           D +CK+G L +A +LF +L  KGL P    Y+ +I+GLC++G L++A +    ME++GC 
Sbjct: 491 DAMCKSGNLRDARKLFSELFVKGLQPNAQIYTTIINGLCKEGLLDEALEAFRNMEEDGCP 550

Query: 506 PNVVTFNTLMHGFLQNNKTSKVVELLHKMAE 536
           P+ +++N ++ GFL +   S+ V+L+ +M +
Sbjct: 551 PDEISYNVIIRGFLHHKDESRAVQLIGEMRD 581



 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 117/429 (27%), Positives = 205/429 (47%), Gaps = 43/429 (10%)

Query: 193 IFSYSIIIDSLCKEG-LVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
           I  ++ ++ ++ K G   D    L  +M+  G++P +   + LI+ F      +    + 
Sbjct: 97  IIQFTKLLSAIVKMGQYYDTVISLTKQMELAGLSPNIYTLSILINCFSHLQRVDLAFSVL 156

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
            +++ LG +P ++TF  +I+ LCK GK  +A  L + M+ RG  PD +TY ++++G C +
Sbjct: 157 AKIIKLGLQPTIVTFTTLINWLCKVGKFAQAMELFDDMVARGCRPDVYTYTTIINGLCKI 216

Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
           G    A  +   M   GC+  VV+Y+ +I+ + K   V EA+ ++  +   G+   + TY
Sbjct: 217 GETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHRKDRRVNEALDIFSYMKVKGISPDIFTY 276

Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAV-------- 423
           N+L+ GL    Q   A  L +EM+  N+ PD+ T+N+L+D +CK   V EA         
Sbjct: 277 NSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVTFNVLVDTICKEGKVSEAQGVLKTMTE 336

Query: 424 ---------------------------KLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDN 456
                                      KLF  +     +  +  +N LI+G CK  R+D 
Sbjct: 337 MGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMITKGCKPDVFSYNILINGYCKVKRIDE 396

Query: 457 AWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMH 516
           A +LF+++  +GL P  V+Y+ +IHGLC+ G L +A +    M  NG  PN+ T++ L+ 
Sbjct: 397 AKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLREARNLFKNMHTNGNLPNLFTYSILLD 456

Query: 517 GFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKSSYRACL 576
           GF +     K   L   M        P+   ++I++D + K     +   +        L
Sbjct: 457 GFCKQGYFGKAFRLFRAMQSTYSK--PNLVMYNILIDAMCKSGNLRDARKLFSE-----L 509

Query: 577 YVTIFQPSS 585
           +V   QP++
Sbjct: 510 FVKGLQPNA 518



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 82/326 (25%), Positives = 143/326 (43%), Gaps = 40/326 (12%)

Query: 271 DCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRI-DTAREIFLSMHSKGC 329
           D  C    I++A      M+ R   P    +  L+     +G+  DT   +   M   G 
Sbjct: 70  DDACSFRNIDDALASFNHMLHRKPLPCIIQFTKLLSAIVKMGQYYDTVISLTKQMELAGL 129

Query: 330 KHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQK 389
              + + +ILIN +  +  V+ A S+  +II  G++ T++T+ T                
Sbjct: 130 SPNIYTLSILINCFSHLQRVDLAFSVLAKIIKLGLQPTIVTFTT---------------- 173

Query: 390 LFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLC 449
                              LI+ LCK     +A++LF  +        +  +  +I+GLC
Sbjct: 174 -------------------LINWLCKVGKFAQAMELFDDMVARGCRPDVYTYTTIINGLC 214

Query: 450 KAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVV 509
           K G    A  L  K+ + G  P VVTYS +I    +  ++ +A D   YM+  G +P++ 
Sbjct: 215 KIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHRKDRRVNEALDIFSYMKVKGISPDIF 274

Query: 510 TFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSK 569
           T+N+L+ G    ++  +   LL++M     N++PD  TF+++VD + K+ K  E   V K
Sbjct: 275 TYNSLIQGLCNFSQWKEASALLNEMRS--LNIMPDIVTFNVLVDTICKEGKVSEAQGVLK 332

Query: 570 SSYRACLYVTIFQPSSLGSMIGCTVR 595
           +     +   +   SSL  M G ++R
Sbjct: 333 TMTEMGVEPDVVTYSSL--MYGYSLR 356


>gi|297737176|emb|CBI26377.3| unnamed protein product [Vitis vinifera]
          Length = 572

 Score =  358 bits (919), Expect = 4e-96,   Method: Compositional matrix adjust.
 Identities = 190/493 (38%), Positives = 287/493 (58%), Gaps = 51/493 (10%)

Query: 105 GLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCR 164
           G  PD +T+  L+       +G+ +EN I +A  LF  M   G+  D  TYG LING C+
Sbjct: 72  GFEPDAVTVTTLV-------KGVWMENGIPDAVQLFDEMTEKGLFGDAKTYGILINGLCK 124

Query: 165 TGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGI 224
                +A++LH+KM           K ++F+Y +IIDSLCK+G+  +A ++F EM G GI
Sbjct: 125 ARKTGLAIKLHEKMKGN-------CKGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGI 177

Query: 225 NPAVVVCTTL-----------------------------------IHGFCCAGNWEEVNG 249
            P VVV ++L                                   IHG   AG W+EV  
Sbjct: 178 LPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTW 237

Query: 250 LFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYC 309
               M+D G  P+  TF ++ID LCK GK+ EA  +LELM  +G  PD  TYN+LM+G C
Sbjct: 238 FLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLC 297

Query: 310 LVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVI 369
           LVG+++ A ++F S+  +G K  V SYNILINGYCK   ++EA  L+ ++   G++ + +
Sbjct: 298 LVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTV 357

Query: 370 TYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHML 429
           TYNTL+  L Q+G+   AQKLF EM+       LSTY +L+DGLCKN  ++EA+ LF  +
Sbjct: 358 TYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSI 417

Query: 430 EMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKL 489
           +  + +  IE+F+ L+DG+C+AG+L+ AW+ F ++ + GL P  + Y+I+I+GLC KG L
Sbjct: 418 KKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGML 477

Query: 490 EKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFS 549
            +A   L  ME+ GC P+ +TFN ++   L+ N+  + ++LL +M    RN  PD+   S
Sbjct: 478 SEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMR--NRNFSPDEAVTS 535

Query: 550 IVVDLLAKDEKYH 562
           +++ L + D ++H
Sbjct: 536 MLLCLASFDPQWH 548



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 72/212 (33%), Positives = 112/212 (52%), Gaps = 11/212 (5%)

Query: 360 ISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCV 419
           +  G     +T  TL+ G++       A +LFDEM    +  D  TY ILI+GLCK    
Sbjct: 69  LKRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTEKGLFGDAKTYGILINGLCKARKT 128

Query: 420 QEAVKLFHMLEMN----KFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVT 475
             A+KL   ++ N     F +G+     +ID LCK G    A ++F ++   G++P VV 
Sbjct: 129 GLAIKLHEKMKGNCKGDVFTYGM-----IIDSLCKDGMTTEALDMFSEMIGAGILPDVVV 183

Query: 476 YSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMA 535
           YS ++ GLCR G+L++A +F   ME  G + +V T+N+L+HG  +     +V   L+ M 
Sbjct: 184 YSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMV 243

Query: 536 EPERNLVPDDTTFSIVVDLLAKDEKYHECSAV 567
           +  R   PD  TF+I++D L K+ K  E   +
Sbjct: 244 D--RGFSPDAFTFTILIDGLCKEGKVGEAQQI 273


>gi|9502388|gb|AAF88095.1|AC025417_23 T12C24.15 [Arabidopsis thaliana]
          Length = 735

 Score =  358 bits (918), Expect = 6e-96,   Method: Compositional matrix adjust.
 Identities = 197/565 (34%), Positives = 307/565 (54%), Gaps = 61/565 (10%)

Query: 29  RQIAAVSSPETQLNEFLHENCKSGIINLNE--ARYFFGYMTHMQPSPPISSFNLLFGAVA 86
           R  ++VS  + +++    E  +SGI+++ E  A   F  MT  +P P +  F+ LF  VA
Sbjct: 26  RVFSSVSDGKGKVS--YRERLRSGIVDIKEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVA 83

Query: 87  KNRHYDAVISFYRKLVSIGLLPDFLTLNILINC--------------------------- 119
           + + YD V+   +++   G+  +  TL+I+INC                           
Sbjct: 84  RTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTV 143

Query: 120 -FGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKM 178
            F     GLC+E R+ EA  L   M+  G +P +IT   L+NG C  G +S A+ L  +M
Sbjct: 144 TFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRM 203

Query: 179 VSGDYENGLIS-----------------------------KTNIFSYSIIIDSLCKEGLV 209
           V   ++   ++                             K +   YSIIID LCK+G +
Sbjct: 204 VETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSL 263

Query: 210 DKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVM 269
           D A  LF EM+ +G    +++ TTLI GFC AG W++   L  +M+     P+++ F+ +
Sbjct: 264 DNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSAL 323

Query: 270 IDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGC 329
           IDC  K GK+ EA  L + MIQRG++PD  TY SL+DG+C   ++D A  +   M SKGC
Sbjct: 324 IDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGC 383

Query: 330 KHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQK 389
              + ++NILINGYCK   +++ + L+R++   GV    +TYNTL+ G  + G+   A++
Sbjct: 384 GPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKE 443

Query: 390 LFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLC 449
           LF EM    V PD+ +Y IL+DGLC N   ++A+++F  +E +K E  I I+N +I G+C
Sbjct: 444 LFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMC 503

Query: 450 KAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVV 509
            A ++D+AW+LF  LP KG+ P V TY+IMI GLC+KG L +A+     ME++G +PN  
Sbjct: 504 NASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGC 563

Query: 510 TFNTLMHGFLQNNKTSKVVELLHKM 534
           T+N L+   L     +K  +L+ ++
Sbjct: 564 TYNILIRAHLGEGDATKSAKLIEEI 588



 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 115/378 (30%), Positives = 190/378 (50%), Gaps = 37/378 (9%)

Query: 210 DKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVM 269
           D A +LF EM      P ++  + L         ++ V  L  +M   G   NL T ++M
Sbjct: 54  DDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIM 113

Query: 270 IDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGC 329
           I+C C+  K++ A   +  +I+ G  PD  T+++L++G CL GR+  A E+   M   G 
Sbjct: 114 INCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGH 173

Query: 330 KHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQK 389
           K T+++ N L+NG C    V +A+ L  +++  G +   +TY  +L  + ++GQ   A +
Sbjct: 174 KPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAME 233

Query: 390 LFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLC 449
           L  +M+   ++ D   Y+I+IDGLCK+  +  A  LF+ +E+  F+  I I+  LI G C
Sbjct: 234 LLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFC 293

Query: 450 KAGRLDN-----------------------------------AWELFHKLPQKGLVPTVV 474
            AGR D+                                   A EL  ++ Q+G+ P  V
Sbjct: 294 YAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTV 353

Query: 475 TYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKM 534
           TY+ +I G C++ +L+KAN  L  M   GC PN+ TFN L++G+ + N     +EL  KM
Sbjct: 354 TYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKM 413

Query: 535 AEPERNLVPDDTTFSIVV 552
           +   R +V D  T++ ++
Sbjct: 414 S--LRGVVADTVTYNTLI 429



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 116/402 (28%), Positives = 179/402 (44%), Gaps = 41/402 (10%)

Query: 55  NLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLN 114
            L EA      M     SP   ++  L     K    D        +VS G  P+  T N
Sbjct: 332 KLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFN 391

Query: 115 ILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRL 174
           ILIN       G C  N I +   LF+ M   GV  D +TY TLI GFC  G L VA  L
Sbjct: 392 ILIN-------GYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKEL 444

Query: 175 HKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTL 234
            ++MVS         + +I SY I++D LC  G  +KA E+F +++   +   + +   +
Sbjct: 445 FQEMVSRRV------RPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNII 498

Query: 235 IHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGL 294
           IHG C A   ++   LF  +   G +P++ T+N+MI  LCK G ++EA+ L   M + G 
Sbjct: 499 IHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGH 558

Query: 295 NPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTV--------------------- 333
           +P+  TYN L+  +  +G  D  +   L    K C  +V                     
Sbjct: 559 SPNGCTYNILIRAH--LGEGDATKSAKLIEEIKRCGFSVDASTLRFALSTLARMLKAGHE 616

Query: 334 ---VSYNILINGYCKILN--VEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQ 388
               ++  L+  +C   N  V +A +L++ + + G +  V+TYNT++ GL          
Sbjct: 617 PDVFTFTTLLRPFCLEENASVYDAPTLFKNMKAMGYKPNVVTYNTVIKGLLNGNMISQVP 676

Query: 389 KLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLE 430
            + D+M     +P+  T +  I GLCK +    A+ L   +E
Sbjct: 677 GVLDQMFERGCQPNAVTKSTFISGLCKQDLHGSAILLLRKME 718



 Score =  125 bits (314), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 82/293 (27%), Positives = 138/293 (47%), Gaps = 2/293 (0%)

Query: 278 KINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYN 337
           K ++A  L + M +    P    ++ L        + D   ++   M  KG  H + + +
Sbjct: 52  KEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLS 111

Query: 338 ILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLY 397
           I+IN  C+   +  A S   +II  G     +T++TL++GL   G+   A +L D M   
Sbjct: 112 IMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEM 171

Query: 398 NVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNA 457
             +P L T N L++GLC N  V +AV L   +    F+     +  ++  +CK+G+   A
Sbjct: 172 GHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALA 231

Query: 458 WELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHG 517
            EL  K+ ++ +    V YSI+I GLC+ G L+ A +    ME  G   +++ + TL+ G
Sbjct: 232 MELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRG 291

Query: 518 FLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKS 570
           F    +     +LL  M   +R + PD   FS ++D   K+ K  E   + K 
Sbjct: 292 FCYAGRWDDGAKLLRDMI--KRKITPDVVAFSALIDCFVKEGKLREAEELHKE 342



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 82/303 (27%), Positives = 136/303 (44%), Gaps = 39/303 (12%)

Query: 31  IAAVSSPETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRH 90
           +  V +     N  +   C+ G   L  A+  F  M   +  P I S+ +L   +  N  
Sbjct: 415 LRGVVADTVTYNTLIQGFCELG--KLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGE 472

Query: 91  YDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRP 150
            +  +  + K+    +  D    NI+I+       G+C  +++ +A  LF ++   GV+P
Sbjct: 473 PEKALEIFEKIEKSKMELDIGIYNIIIH-------GMCNASKVDDAWDLFCSLPLKGVKP 525

Query: 151 DVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVD 210
           DV TY  +I G C+ G+LS A  L +KM     E+G     N  +Y+I+I +   EG   
Sbjct: 526 DVKTYNIMIGGLCKKGSLSEADLLFRKM----EEDG--HSPNGCTYNILIRAHLGEGDAT 579

Query: 211 KAKELFLEMKGRGIN----------------------PAVVVCTTLIHGFCCAGNWE--E 246
           K+ +L  E+K  G +                      P V   TTL+  FC   N    +
Sbjct: 580 KSAKLIEEIKRCGFSVDASTLRFALSTLARMLKAGHEPDVFTFTTLLRPFCLEENASVYD 639

Query: 247 VNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMD 306
              LF  M  +G +PN++T+N +I  L  G  I++  G+L+ M +RG  P+  T ++ + 
Sbjct: 640 APTLFKNMKAMGYKPNVVTYNTVIKGLLNGNMISQVPGVLDQMFERGCQPNAVTKSTFIS 699

Query: 307 GYC 309
           G C
Sbjct: 700 GLC 702


>gi|354726093|emb|CCD31439.1| RNA processing factor 3 [Arabidopsis thaliana]
          Length = 629

 Score =  357 bits (915), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 200/565 (35%), Positives = 307/565 (54%), Gaps = 71/565 (12%)

Query: 54  INLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVIS----------------- 96
           + L++A   FG M   +P P I  FN L  A+AK + +D VIS                 
Sbjct: 59  LKLDDAIGLFGEMVQSRPLPSIVEFNKLLSAIAKMKKFDLVISLGERMQNLRISYDLYSY 118

Query: 97  ------FYR------------KLVSIGLLPDFLTLNILINCFGNKER------------- 125
                 F R            K++ +G  PD +TL+ L+N + + +R             
Sbjct: 119 NILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVE 178

Query: 126 ---------------GLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSV 170
                          GL + N+  EA  L   M+  G +PD++TYG ++NG C+ G++ +
Sbjct: 179 MGYKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDL 238

Query: 171 ALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVV 230
           AL L KKM  G  E       ++  Y+ IID LCK   +D A  LF +M+ +GI P V  
Sbjct: 239 ALSLLKKMEKGKIE------ADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFT 292

Query: 231 CTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMI 290
             +LI   C  G W + + L   M++    PN++TF+ +ID   K GK+ EA  L + MI
Sbjct: 293 YNSLISCLCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMI 352

Query: 291 QRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVE 350
           +R ++PD FTY+SL++G+C+  R+D A+ +F  M SK C   VV+YN LI G+CK   VE
Sbjct: 353 KRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVE 412

Query: 351 EAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILI 410
           E M L+R++   G+    +TYNTL+ GLFQAG    AQK+F +M    V PD+ TY+IL+
Sbjct: 413 EGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILL 472

Query: 411 DGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLV 470
           DGLCK   +++A+ +F  L+ +K E  I  +N +I+G+CKAG++++ W+LF  L  KG+ 
Sbjct: 473 DGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVK 532

Query: 471 PTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVEL 530
           P V+ Y+ MI G CRKG  E+A+     M+++G  P+   +NTL+   L++   +   EL
Sbjct: 533 PNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARLRDGDKAASAEL 592

Query: 531 LHKMAEPERNLVPDDTTFSIVVDLL 555
           + +M       V D +T S+V+++L
Sbjct: 593 IKEMRSC--GFVGDASTISMVINML 615



 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 125/426 (29%), Positives = 222/426 (52%), Gaps = 8/426 (1%)

Query: 132 RIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKT 191
           ++ +A  LF  M+     P ++ +  L++   +     + + L ++M     +N  IS  
Sbjct: 60  KLDDAIGLFGEMVQSRPLPSIVEFNKLLSAIAKMKKFDLVISLGERM-----QNLRIS-Y 113

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
           +++SY+I+I+  C+   +  A  +  +M   G  P +V  ++L++G+C +    +   L 
Sbjct: 114 DLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALV 173

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
            +M+++G +P+ +TFN +I  L    K +EA  L++ M+QRG  PD  TY ++++G C  
Sbjct: 174 DQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKR 233

Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
           G ID A  +   M     +  VV YN +I+G CK  ++++A +L+ ++ + G+R  V TY
Sbjct: 234 GDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTY 293

Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
           N+L+S L   G+   A +L   M    + P++ T++ LID   K   + EA KL+  +  
Sbjct: 294 NSLISCLCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIK 353

Query: 432 NKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEK 491
              +  I  ++ LI+G C   RLD A  +F  +  K   P VVTY+ +I G C+  ++E+
Sbjct: 354 RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEE 413

Query: 492 ANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIV 551
             +    M + G   N VT+NTL+ G  Q        ++  KM      + PD  T+SI+
Sbjct: 414 GMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSD--GVPPDIITYSIL 471

Query: 552 VDLLAK 557
           +D L K
Sbjct: 472 LDGLCK 477



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 86/309 (27%), Positives = 147/309 (47%), Gaps = 2/309 (0%)

Query: 278 KINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYN 337
           K+++A GL   M+Q    P    +N L+     + + D    +   M +    + + SYN
Sbjct: 60  KLDDAIGLFGEMVQSRPLPSIVEFNKLLSAIAKMKKFDLVISLGERMQNLRISYDLYSYN 119

Query: 338 ILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLY 397
           ILIN +C+   +  A+++  +++  G    ++T ++LL+G   + +   A  L D+M   
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 179

Query: 398 NVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNA 457
             +PD  T+N LI GL  +N   EAV L   +     +  +  +  +++GLCK G +D A
Sbjct: 180 GYKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLA 239

Query: 458 WELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHG 517
             L  K+ +  +   VV Y+ +I GLC+   ++ A      ME  G  P+V T+N+L+  
Sbjct: 240 LSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISC 299

Query: 518 FLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKSSYRACLY 577
                + S    LL  M E  R + P+  TFS ++D   K+ K  E   +     +  + 
Sbjct: 300 LCNYGRWSDASRLLSNMIE--RKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID 357

Query: 578 VTIFQPSSL 586
             IF  SSL
Sbjct: 358 PDIFTYSSL 366



 Score = 82.0 bits (201), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 66/250 (26%), Positives = 107/250 (42%), Gaps = 36/250 (14%)

Query: 56  LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNI 115
           L+EA++ F  M      P + ++N L     K +  +  +  +R++   GL+ + +T N 
Sbjct: 376 LDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNT 435

Query: 116 LINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRL- 174
           LI       +GL        A  +FK M++ GV PD+ITY  L++G C+ G L  AL + 
Sbjct: 436 LI-------QGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVF 488

Query: 175 --------------HKKMVSGDYENGLIS--------------KTNIFSYSIIIDSLCKE 206
                         +  M+ G  + G +               K N+  Y+ +I   C++
Sbjct: 489 EYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRK 548

Query: 207 GLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTF 266
           GL ++A  LF EMK  G  P      TLI      G+      L  EM   G   +  T 
Sbjct: 549 GLKEEADALFREMKEDGTLPDSGCYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTI 608

Query: 267 NVMIDCLCKG 276
           +++I+ L  G
Sbjct: 609 SMVINMLHDG 618


>gi|79317869|ref|NP_001031033.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75178969|sp|Q9LPX2.1|PPR39_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g12775, mitochondrial; Flags: Precursor
 gi|8698724|gb|AAF78482.1|AC012187_2 Contains similarity to an unknown protein F16M19.7 gi|6598837 from
           Arabidopsis thaliana BAC F16M19 gb|AC010795 and contains
           multiple PPR PF|01535 repeats. EST gb|AI999079 comes
           from this gene [Arabidopsis thaliana]
 gi|332190806|gb|AEE28927.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 644

 Score =  356 bits (913), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 197/573 (34%), Positives = 310/573 (54%), Gaps = 61/573 (10%)

Query: 46  HENCKSGIINL--NEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVS 103
            +   SG++ +  ++A   F  M   +P P +  FN LF A+AK + Y+ V++  +++ S
Sbjct: 57  RDKLSSGLVGIKADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMES 116

Query: 104 IGLLPDFLTLNILINCFGNKER----------------------------GLCVENRIKE 135
            G+     TL+I+INCF    +                            GLC+E R+ E
Sbjct: 117 KGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSE 176

Query: 136 ATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLIS------ 189
           A  L   M+  G +P +IT  TL+NG C  G +S A+ L  +MV   ++   ++      
Sbjct: 177 ALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLN 236

Query: 190 -----------------------KTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINP 226
                                  K +   YSIIID LCK+G +D A  LF EM+ +G   
Sbjct: 237 VMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKA 296

Query: 227 AVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLL 286
            ++   TLI GFC AG W++   L  +M+     PN++TF+V+ID   K GK+ EA+ LL
Sbjct: 297 DIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLL 356

Query: 287 ELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKI 346
           + M+QRG+ P+  TYNSL+DG+C   R++ A ++   M SKGC   ++++NILINGYCK 
Sbjct: 357 KEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKA 416

Query: 347 LNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTY 406
             +++ + L+R++   GV    +TYNTL+ G  Q+G+   A+KLF EM    V PD+ +Y
Sbjct: 417 NRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSY 476

Query: 407 NILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQ 466
            IL+DGLC N  +++A+++F  +E +K E  I I+  +I G+C A ++D+AW+LF  LP 
Sbjct: 477 KILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPL 536

Query: 467 KGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSK 526
           KG+      Y+IMI  LCRK  L KA+     M + G AP+ +T+N L+   L ++  + 
Sbjct: 537 KGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATT 596

Query: 527 VVELLHKMAEPERNLVPDDTTFSIVVDLLAKDE 559
             EL+ +M         D +T  +V+++L+  E
Sbjct: 597 AAELIEEMKSS--GFPADVSTVKMVINMLSSGE 627



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 87/294 (29%), Positives = 144/294 (48%), Gaps = 2/294 (0%)

Query: 276 GGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVS 335
           G K ++A  L   MIQ    P    +N L        + +    +   M SKG  H++ +
Sbjct: 66  GIKADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYT 125

Query: 336 YNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMK 395
            +I+IN +C+   +  A S   +I+  G     + +NTLL+GL    +   A +L D M 
Sbjct: 126 LSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMV 185

Query: 396 LYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLD 455
               +P L T N L++GLC N  V +AV L   +    F+     +  +++ +CK+G+  
Sbjct: 186 EMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTA 245

Query: 456 NAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLM 515
            A EL  K+ ++ +    V YSI+I GLC+ G L+ A +    ME  G   +++T+NTL+
Sbjct: 246 LAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLI 305

Query: 516 HGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSK 569
            GF    +     +LL  M   +R + P+  TFS+++D   K+ K  E   + K
Sbjct: 306 GGFCNAGRWDDGAKLLRDMI--KRKISPNVVTFSVLIDSFVKEGKLREADQLLK 357



 Score = 69.3 bits (168), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 46/189 (24%), Positives = 89/189 (47%), Gaps = 2/189 (1%)

Query: 369 ITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHM 428
           ++Y   LS      +A  A  LF +M      P +  +N L   + K    +  + L   
Sbjct: 54  LSYRDKLSSGLVGIKADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQ 113

Query: 429 LEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGK 488
           +E       I   + +I+  C+  +L  A+    K+ + G  P  V ++ +++GLC + +
Sbjct: 114 MESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECR 173

Query: 489 LEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTF 548
           + +A + +  M + G  P ++T NTL++G   N K S  V L+ +M E      P++ T+
Sbjct: 174 VSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVET--GFQPNEVTY 231

Query: 549 SIVVDLLAK 557
             V++++ K
Sbjct: 232 GPVLNVMCK 240


>gi|224092696|ref|XP_002309701.1| predicted protein [Populus trichocarpa]
 gi|222855677|gb|EEE93224.1| predicted protein [Populus trichocarpa]
          Length = 597

 Score =  354 bits (909), Expect = 6e-95,   Method: Compositional matrix adjust.
 Identities = 195/531 (36%), Positives = 304/531 (57%), Gaps = 38/531 (7%)

Query: 44  FLHEN-CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAK-NRHYDAVISFYRKL 101
           + H+N   S   N+++A   F +M H +P P I  F  L  A+ K  ++YD VIS  +++
Sbjct: 60  YQHKNDASSSFRNIDDALASFNHMLHRKPLPCIIQFAKLLSAIVKMGQYYDVVISLSKQM 119

Query: 102 VSIGLLPDFLTLNILINCFGNKER----------------------------GLCVENRI 133
             +GL P+  TL+I +NCF   +R                            GLC     
Sbjct: 120 ELVGLSPNIYTLSIFMNCFCQLQRVDLGFSVLAKVIKLGLQPTIVTFTTLINGLCKVGEF 179

Query: 134 KEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNI 193
            +A  LF +M+A G +PDV TY T+ING C+ G  + A  L KKM     E G   + N+
Sbjct: 180 AQAVELFDDMVAKGCQPDVYTYNTIINGLCKIGETAAAAGLLKKM----EEAG--CQPNM 233

Query: 194 FSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIE 253
            +YS +IDSLC++ LV++A ++F  MK +GI+P +   T+LI G C    W+E + L  E
Sbjct: 234 VTYSTLIDSLCRDRLVNEALDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEASALLNE 293

Query: 254 MLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGR 313
           M  L   P+++TFNV++D  CK GK++EA G+L+ M + G+ P+  TY+SLM GY L   
Sbjct: 294 MTSLNIMPDIVTFNVLVDTFCKEGKVSEALGVLKTMTEMGVEPNVVTYSSLMYGYSLWTD 353

Query: 314 IDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNT 373
           +  AR++F  M +KGCK  + SYNILINGYCK   ++EAM L+ ++I  G+    ++YNT
Sbjct: 354 VVEARKLFHVMITKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNT 413

Query: 374 LLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNK 433
           L+ G  Q G+   AQ LF  M      PDL TY+IL+DG CK   + +A +LF  ++   
Sbjct: 414 LIHGFCQLGKLREAQDLFRNMCTNGNLPDLFTYSILLDGFCKQGYLGKAFRLFRAMQSTY 473

Query: 434 FEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKAN 493
            +  + ++  L+  +CK+G   +A +LF +L  +GL P V  Y+ +I+GLC++G L++A 
Sbjct: 474 LKPNLVMYTILVHAMCKSGNHKDARKLFSELFVQGLQPHVQLYTTIINGLCKEGLLDEAL 533

Query: 494 DFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPD 544
           +    ME +GC P+ +++N ++ G LQ+   S+ + L+ +M   +R  + D
Sbjct: 534 EAFRNMEADGCPPDEISYNVIIRGLLQHKDESRALLLVGEMR--DRGFIAD 582



 Score =  175 bits (443), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 120/446 (26%), Positives = 198/446 (44%), Gaps = 78/446 (17%)

Query: 209 VDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVN-GLFIEMLDLGPRPNLLTFN 267
           +D A   F  M  R   P ++    L+      G + +V   L  +M  +G  PN+ T +
Sbjct: 73  IDDALASFNHMLHRKPLPCIIQFAKLLSAIVKMGQYYDVVISLSKQMELVGLSPNIYTLS 132

Query: 268 VMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSK 327
           + ++C C+  +++    +L  +I+ GL P   T+ +L++G C VG    A E+F  M +K
Sbjct: 133 IFMNCFCQLQRVDLGFSVLAKVIKLGLQPTIVTFTTLINGLCKVGEFAQAVELFDDMVAK 192

Query: 328 GCKHTVVSYNILINGYCKILN-----------------------------------VEEA 352
           GC+  V +YN +ING CKI                                     V EA
Sbjct: 193 GCQPDVYTYNTIINGLCKIGETAAAAGLLKKMEEAGCQPNMVTYSTLIDSLCRDRLVNEA 252

Query: 353 MSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDG 412
           + ++  + + G+   + TY +L+ GL +  +   A  L +EM   N+ PD+ T+N+L+D 
Sbjct: 253 LDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIMPDIVTFNVLVDT 312

Query: 413 LCKNNCVQEAV-----------------------------------KLFHMLEMNKFEFG 437
            CK   V EA+                                   KLFH++     +  
Sbjct: 313 FCKEGKVSEALGVLKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEARKLFHVMITKGCKPN 372

Query: 438 IEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLL 497
           I  +N LI+G CKA R+D A +LF+++  +GL P  V+Y+ +IHG C+ GKL +A D   
Sbjct: 373 IFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREAQDLFR 432

Query: 498 YMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAK 557
            M  NG  P++ T++ L+ GF +     K   L   M      L P+   ++I+V  + K
Sbjct: 433 NMCTNGNLPDLFTYSILLDGFCKQGYLGKAFRLFRAMQSTY--LKPNLVMYTILVHAMCK 490

Query: 558 DEKYHECSAVSKSSYRACLYVTIFQP 583
              + +   +        L+V   QP
Sbjct: 491 SGNHKDARKLFSE-----LFVQGLQP 511



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 72/272 (26%), Positives = 131/272 (48%), Gaps = 3/272 (1%)

Query: 300 TYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEA-MSLYRQ 358
           TY    D       ID A   F  M  +     ++ +  L++   K+    +  +SL +Q
Sbjct: 59  TYQHKNDASSSFRNIDDALASFNHMLHRKPLPCIIQFAKLLSAIVKMGQYYDVVISLSKQ 118

Query: 359 IISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNC 418
           +   G+   + T +  ++   Q  +      +  ++    ++P + T+  LI+GLCK   
Sbjct: 119 MELVGLSPNIYTLSIFMNCFCQLQRVDLGFSVLAKVIKLGLQPTIVTFTTLINGLCKVGE 178

Query: 419 VQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSI 478
             +AV+LF  +     +  +  +N +I+GLCK G    A  L  K+ + G  P +VTYS 
Sbjct: 179 FAQAVELFDDMVAKGCQPDVYTYNTIINGLCKIGETAAAAGLLKKMEEAGCQPNMVTYST 238

Query: 479 MIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPE 538
           +I  LCR   + +A D   YM+  G +P++ T+ +L+ G  + ++  +   LL++M    
Sbjct: 239 LIDSLCRDRLVNEALDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTS-- 296

Query: 539 RNLVPDDTTFSIVVDLLAKDEKYHECSAVSKS 570
            N++PD  TF+++VD   K+ K  E   V K+
Sbjct: 297 LNIMPDIVTFNVLVDTFCKEGKVSEALGVLKT 328



 Score = 63.2 bits (152), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 50/190 (26%), Positives = 80/190 (42%), Gaps = 15/190 (7%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
           N  +H  C+ G   L EA+  F  M      P + ++++L     K  +       +R +
Sbjct: 412 NTLIHGFCQLG--KLREAQDLFRNMCTNGNLPDLFTYSILLDGFCKQGYLGKAFRLFRAM 469

Query: 102 VSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLING 161
            S  L P+ +   IL++        +C     K+A  LF  +   G++P V  Y T+ING
Sbjct: 470 QSTYLKPNLVMYTILVH-------AMCKSGNHKDARKLFSELFVQGLQPHVQLYTTIING 522

Query: 162 FCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKG 221
            C+ G L  AL   + M +           +  SY++II  L +     +A  L  EM+ 
Sbjct: 523 LCKEGLLDEALEAFRNMEADG------CPPDEISYNVIIRGLLQHKDESRALLLVGEMRD 576

Query: 222 RGINPAVVVC 231
           RG    V  C
Sbjct: 577 RGFIADVRPC 586


>gi|334183590|ref|NP_176479.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75179661|sp|Q9LQ16.1|PPR94_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62910
 gi|8493578|gb|AAF75801.1|AC011000_4 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
           repeats [Arabidopsis thaliana]
 gi|332195899|gb|AEE34020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 632

 Score =  353 bits (906), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 198/568 (34%), Positives = 298/568 (52%), Gaps = 71/568 (12%)

Query: 51  SGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDF 110
           S II +++A   FG M   +P P I  FN L  AVAK   ++ VIS   ++ ++G+  D 
Sbjct: 59  SDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDL 118

Query: 111 LTLNILINCFGNKER----------------------------GLCVENRIKEATWLFKN 142
            T +I INCF  + +                            G C   RI +A  L   
Sbjct: 119 YTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQ 178

Query: 143 MIAFGVR-----------------------------------PDVITYGTLINGFCRTGN 167
           M+  G +                                   PD++TYGT++NG C+ G+
Sbjct: 179 MVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGD 238

Query: 168 LSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPA 227
           + +AL L KKM  G  E       ++  Y+ IID LCK   +D A  LF EM  +GI P 
Sbjct: 239 IDLALSLLKKMEKGKIE------ADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPD 292

Query: 228 VVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLE 287
           V   ++LI   C  G W + + L  +M++    PN++TF+ +ID   K GK+ EA  L +
Sbjct: 293 VFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYD 352

Query: 288 LMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKIL 347
            MI+R ++PD FTY+SL++G+C+  R+D A+ +F  M SK C   VV+Y+ LI G+CK  
Sbjct: 353 EMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAK 412

Query: 348 NVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYN 407
            VEE M L+R++   G+    +TY TL+ G FQA     AQ +F +M    V P++ TYN
Sbjct: 413 RVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYN 472

Query: 408 ILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQK 467
           IL+DGLCKN  + +A+ +F  L+ +  E  I  +N +I+G+CKAG++++ WELF  L  K
Sbjct: 473 ILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLK 532

Query: 468 GLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKV 527
           G+ P V+ Y+ MI G CRKG  E+A+  L  M+++G  PN  T+NTL+   L++      
Sbjct: 533 GVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREAS 592

Query: 528 VELLHKMAEPERNLVPDDTTFSIVVDLL 555
            EL+ +M         D +T  +V ++L
Sbjct: 593 AELIKEMRSC--GFAGDASTIGLVTNML 618



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 139/529 (26%), Positives = 256/529 (48%), Gaps = 30/529 (5%)

Query: 54  INLNEARYFFGYMTHMQPSPP-ISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLT 112
           I+L   R F  +      +PP + SF  L G+    R + +    YR+++    L D + 
Sbjct: 5   ISLTAKRLFVHWNLQGIGNPPTVPSFFNLCGSGCWERSFASASGDYREILR-NRLSDII- 62

Query: 113 LNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVAL 172
                              ++ +A  LF +M+     P ++ +  L++   +     + +
Sbjct: 63  -------------------KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVI 103

Query: 173 RLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCT 232
            L ++M +      L    ++++YSI I+  C+   +  A  +  +M   G  P +V  +
Sbjct: 104 SLGEQMQT------LGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLS 157

Query: 233 TLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQR 292
           +L++G+C +    +   L  +M+++G +P+  TF  +I  L    K +EA  L++ M+QR
Sbjct: 158 SLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQR 217

Query: 293 GLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEA 352
           G  PD  TY ++++G C  G ID A  +   M     +  VV YN +I+G CK  ++++A
Sbjct: 218 GCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDA 277

Query: 353 MSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDG 412
           ++L+ ++ + G+R  V TY++L+S L   G+   A +L  +M    + P++ T++ LID 
Sbjct: 278 LNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDA 337

Query: 413 LCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPT 472
             K   + EA KL+  +     +  I  ++ LI+G C   RLD A  +F  +  K   P 
Sbjct: 338 FVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPN 397

Query: 473 VVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLH 532
           VVTYS +I G C+  ++E+  +    M + G   N VT+ TL+HGF Q         +  
Sbjct: 398 VVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFK 457

Query: 533 KMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKSSYRACLYVTIF 581
           +M      + P+  T++I++D L K+ K  +   V +   R+ +   I+
Sbjct: 458 QMVSV--GVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIY 504



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 97/380 (25%), Positives = 172/380 (45%), Gaps = 24/380 (6%)

Query: 212 AKELFLEMKGRGI-NPAVVVCTTLIHGFCCAGNWEE----VNGLFIEMLDLGPRPNLLTF 266
           AK LF+    +GI NP  V         C +G WE      +G + E+L           
Sbjct: 9   AKRLFVHWNLQGIGNPPTVPS---FFNLCGSGCWERSFASASGDYREILR---------- 55

Query: 267 NVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHS 326
           N + D +    K+++A  L   M++    P    +N L+     + + +    +   M +
Sbjct: 56  NRLSDII----KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQT 111

Query: 327 KGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGY 386
            G  H + +Y+I IN +C+   +  A+++  +++  G    ++T ++LL+G   + +   
Sbjct: 112 LGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISD 171

Query: 387 AQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLID 446
           A  L D+M     +PD  T+  LI GL  +N   EAV L   +     +  +  +  +++
Sbjct: 172 AVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVN 231

Query: 447 GLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAP 506
           GLCK G +D A  L  K+ +  +   VV Y+ +I GLC+   ++ A +    M+  G  P
Sbjct: 232 GLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRP 291

Query: 507 NVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSA 566
           +V T+++L+       + S    LL  M E  R + P+  TFS ++D   K+ K  E   
Sbjct: 292 DVFTYSSLISCLCNYGRWSDASRLLSDMIE--RKINPNVVTFSALIDAFVKEGKLVEAEK 349

Query: 567 VSKSSYRACLYVTIFQPSSL 586
           +     +  +   IF  SSL
Sbjct: 350 LYDEMIKRSIDPDIFTYSSL 369



 Score = 68.9 bits (167), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 56/250 (22%), Positives = 103/250 (41%), Gaps = 36/250 (14%)

Query: 56  LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNI 115
           L+EA++ F  M      P + +++ L     K +  +  +  +R++   GL+ + +T   
Sbjct: 379 LDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTT 438

Query: 116 LINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRL- 174
           LI+       G         A  +FK M++ GV P+++TY  L++G C+ G L+ A+ + 
Sbjct: 439 LIH-------GFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVF 491

Query: 175 --------------HKKMVSGDYENGLIS--------------KTNIFSYSIIIDSLCKE 206
                         +  M+ G  + G +                 N+ +Y+ +I   C++
Sbjct: 492 EYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRK 551

Query: 207 GLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTF 266
           G  ++A  L  +MK  G  P      TLI      G+ E    L  EM   G   +  T 
Sbjct: 552 GSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTI 611

Query: 267 NVMIDCLCKG 276
            ++ + L  G
Sbjct: 612 GLVTNMLHDG 621


>gi|224092332|ref|XP_002309562.1| predicted protein [Populus trichocarpa]
 gi|222855538|gb|EEE93085.1| predicted protein [Populus trichocarpa]
          Length = 590

 Score =  353 bits (906), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 192/515 (37%), Positives = 291/515 (56%), Gaps = 35/515 (6%)

Query: 51  SGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAK-NRHYDAVISFYRKLVSIGLLPD 109
           S   N+++A   F +M H +P P I  F  L  A+ K  ++Y AVIS  +++   GL PD
Sbjct: 70  SSFRNIDDALASFNHMLHREPLPCIIQFTKLLSAIVKMGQYYGAVISLSKQMELAGLSPD 129

Query: 110 FLTLNILINCFGNKER----------------------------GLCVENRIKEATWLFK 141
             TL+ILI+CF + +R                            GLC   +  +A   F 
Sbjct: 130 IYTLSILIDCFSHLQRVDLAFSVFSKMIKLGLQPDAVTFNTLINGLCKVGKFAQAVEFFD 189

Query: 142 NMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIID 201
           +  A G +P V TY T+ING C+ G  + A  L KKM           + N+ +Y+I+ID
Sbjct: 190 DFEASGCQPTVYTYTTIINGLCKIGETTAAAGLFKKMEEAG------CQPNVVTYNILID 243

Query: 202 SLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRP 261
           SLCK+ LV++A ++F  MK + I+P +    +LI G C    W+E + L  EM  L   P
Sbjct: 244 SLCKDKLVNEALDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSLNIMP 303

Query: 262 NLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIF 321
           N+ TFNV++D +CK GK++EA G+ + M + G+ PD  TY+SLM GY L   I  AR++F
Sbjct: 304 NIFTFNVLVDAICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEARKLF 363

Query: 322 LSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQA 381
            +M +KGCK    SYNILI GYCK   ++EA  L+ ++I  G+    + YNTL+ GL Q 
Sbjct: 364 DAMITKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQL 423

Query: 382 GQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIF 441
           G+   AQ LF  M      PDL TY++L+DG CK   + +A +LF +++    +  I ++
Sbjct: 424 GRLREAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAMY 483

Query: 442 NCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEK 501
           N LID +CK G L +A +LF +L  +GL+P V  Y+ +I+ LC++G L++A +    ME 
Sbjct: 484 NILIDAMCKFGNLKDARKLFSELFVQGLLPNVQIYTTIINNLCKEGLLDEALEAFRNMEG 543

Query: 502 NGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAE 536
           +GC P+  ++N ++ GFLQ    S+  +L+ +M +
Sbjct: 544 DGCPPDEFSYNVIIRGFLQYKDESRAAQLIGEMRD 578



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 113/375 (30%), Positives = 185/375 (49%), Gaps = 37/375 (9%)

Query: 218 EMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGG 277
           +M+  G++P +   + LI  F      +    +F +M+ LG +P+ +TFN +I+ LCK G
Sbjct: 120 QMELAGLSPDIYTLSILIDCFSHLQRVDLAFSVFSKMIKLGLQPDAVTFNTLINGLCKVG 179

Query: 278 KINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYN 337
           K  +A    +     G  P  +TY ++++G C +G    A  +F  M   GC+  VV+YN
Sbjct: 180 KFAQAVEFFDDFEASGCQPTVYTYTTIINGLCKIGETTAAAGLFKKMEEAGCQPNVVTYN 239

Query: 338 ILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLY 397
           ILI+  CK   V EA+ ++  + +  +   + TYN+L+ GL    +   A  L +EM   
Sbjct: 240 ILIDSLCKDKLVNEALDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSL 299

Query: 398 NVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLE--------------MNKFEFGIEI--- 440
           N+ P++ T+N+L+D +CK   V EA  +F  +               M  +   +EI   
Sbjct: 300 NIMPNIFTFNVLVDAICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEA 359

Query: 441 ------------------FNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHG 482
                             +N LI G CKA R+D A +LF+++  +GL P  V Y+ +IHG
Sbjct: 360 RKLFDAMITKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHG 419

Query: 483 LCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLV 542
           LC+ G+L +A D    M  NG  P++ T++ L+ GF +     K   L   M      L 
Sbjct: 420 LCQLGRLREAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTY--LK 477

Query: 543 PDDTTFSIVVDLLAK 557
           PD   ++I++D + K
Sbjct: 478 PDIAMYNILIDAMCK 492



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 80/284 (28%), Positives = 141/284 (49%), Gaps = 5/284 (1%)

Query: 314 IDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEA-MSLYRQIISNGVRQTVITYN 372
           ID A   F  M  +     ++ +  L++   K+     A +SL +Q+   G+   + T +
Sbjct: 75  IDDALASFNHMLHREPLPCIIQFTKLLSAIVKMGQYYGAVISLSKQMELAGLSPDIYTLS 134

Query: 373 TLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMN 432
            L+       +   A  +F +M    ++PD  T+N LI+GLCK     +AV+ F   E +
Sbjct: 135 ILIDCFSHLQRVDLAFSVFSKMIKLGLQPDAVTFNTLINGLCKVGKFAQAVEFFDDFEAS 194

Query: 433 KFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKA 492
             +  +  +  +I+GLCK G    A  LF K+ + G  P VVTY+I+I  LC+   + +A
Sbjct: 195 GCQPTVYTYTTIINGLCKIGETTAAAGLFKKMEEAGCQPNVVTYNILIDSLCKDKLVNEA 254

Query: 493 NDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVV 552
            D   YM+    +P++ T+N+L+ G     +  +   LL++M     N++P+  TF+++V
Sbjct: 255 LDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEMTS--LNIMPNIFTFNVLV 312

Query: 553 DLLAKDEKYHECSAVSKSSYRACLYVTIFQPSSLGSMIGCTVRL 596
           D + K+ K  E   V K+     +   +   SSL  M G ++R+
Sbjct: 313 DAICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSL--MYGYSLRM 354


>gi|15221674|ref|NP_176496.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169918|sp|Q9CAN5.1|PPR98_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g63080, mitochondrial; Flags: Precursor
 gi|12323262|gb|AAG51614.1|AC010795_18 unknown protein; 41955-40111 [Arabidopsis thaliana]
 gi|332195930|gb|AEE34051.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 614

 Score =  353 bits (905), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 199/565 (35%), Positives = 295/565 (52%), Gaps = 71/565 (12%)

Query: 54  INLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTL 113
           + L+EA   FG M   +P P I  F+ L  A+AK + +D VISF  K+  +G+  +  T 
Sbjct: 44  LKLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTY 103

Query: 114 NILINCFGNKER----------------------------GLCVENRIKEATWLFKNMIA 145
           NI+INC   + +                            G C  NRI EA  L   M+ 
Sbjct: 104 NIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVE 163

Query: 146 FGV-----------------------------------RPDVITYGTLINGFCRTGNLSV 170
            G                                    +PD++TYG +ING C+ G   +
Sbjct: 164 MGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDL 223

Query: 171 ALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVV 230
           AL L  KM  G  E       ++  YS +IDSLCK   VD A  LF EM  +GI P V  
Sbjct: 224 ALNLLNKMEKGKIE------ADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFT 277

Query: 231 CTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMI 290
            ++LI   C  G W + + L  +ML+    PN++TFN +ID   K GK+ EA  L + MI
Sbjct: 278 YSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMI 337

Query: 291 QRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVE 350
           QR ++P+  TYNSL++G+C+  R+D A++IF  M SK C   VV+YN LING+CK   V 
Sbjct: 338 QRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVV 397

Query: 351 EAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILI 410
           + M L+R +   G+    +TY TL+ G FQA     AQ +F +M    V P++ TYN L+
Sbjct: 398 DGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLL 457

Query: 411 DGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLV 470
           DGLCKN  +++A+ +F  L+ +K E  I  +N + +G+CKAG++++ W+LF  L  KG+ 
Sbjct: 458 DGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVK 517

Query: 471 PTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVEL 530
           P V+ Y+ MI G C+KG  E+A    + M+++G  P+  T+NTL+   L++   +   EL
Sbjct: 518 PDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAEL 577

Query: 531 LHKMAEPERNLVPDDTTFSIVVDLL 555
           + +M         D +T+ +V D+L
Sbjct: 578 IKEMRSCR--FAGDASTYGLVTDML 600



 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 123/436 (28%), Positives = 222/436 (50%), Gaps = 8/436 (1%)

Query: 132 RIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKT 191
           ++ EA  LF  M+     P ++ +  L++   +     + +   +KM        L    
Sbjct: 45  KLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKM------EILGVSH 98

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
           N+++Y+I+I+ LC+   +  A  +  +M   G  P++V   +L++GFC      E   L 
Sbjct: 99  NLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALV 158

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
            +M+++G +P+ +TF  ++  L +  K +EA  L+E M+ +G  PD  TY ++++G C  
Sbjct: 159 DQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKR 218

Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
           G  D A  +   M     +  VV Y+ +I+  CK  +V++A++L+ ++ + G+R  V TY
Sbjct: 219 GEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTY 278

Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
           ++L+S L   G+   A +L  +M    + P++ T+N LID   K   + EA KLF  +  
Sbjct: 279 SSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQ 338

Query: 432 NKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEK 491
              +  I  +N LI+G C   RLD A ++F  +  K  +P VVTY+ +I+G C+  K+  
Sbjct: 339 RSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVD 398

Query: 492 ANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIV 551
             +    M + G   N VT+ TL+HGF Q +       +  +M      + P+  T++ +
Sbjct: 399 GMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSD--GVHPNIMTYNTL 456

Query: 552 VDLLAKDEKYHECSAV 567
           +D L K+ K  +   V
Sbjct: 457 LDGLCKNGKLEKAMVV 472



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 77/307 (25%), Positives = 121/307 (39%), Gaps = 64/307 (20%)

Query: 41  LNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRK 100
            N  +    K G   L EA   F  M      P I ++N L      +   D     +  
Sbjct: 313 FNSLIDAFAKEG--KLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTL 370

Query: 101 LVSIGLLPDFLTLNILINCFGNKE--------------RGLCVENRI------------- 133
           +VS   LPD +T N LIN F   +              RGL V N +             
Sbjct: 371 MVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGL-VGNTVTYTTLIHGFFQAS 429

Query: 134 --KEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHK-----KMVSGDYENG 186
               A  +FK M++ GV P+++TY TL++G C+ G L  A+ + +     KM    Y   
Sbjct: 430 DCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYN 489

Query: 187 LIS------------------------KTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGR 222
           ++S                        K ++ +Y+ +I   CK+GL ++A  LF++MK  
Sbjct: 490 IMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKED 549

Query: 223 GINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEA 282
           G  P      TLI      G+      L  EM       +  T+ ++ D L   G++++ 
Sbjct: 550 GPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDML-HDGRLDK- 607

Query: 283 NGLLELM 289
            G LE++
Sbjct: 608 -GFLEVL 613


>gi|224123314|ref|XP_002319048.1| predicted protein [Populus trichocarpa]
 gi|222857424|gb|EEE94971.1| predicted protein [Populus trichocarpa]
          Length = 497

 Score =  352 bits (904), Expect = 3e-94,   Method: Compositional matrix adjust.
 Identities = 190/474 (40%), Positives = 282/474 (59%), Gaps = 15/474 (3%)

Query: 86  AKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIA 145
           + + H+    S    +  +GL P+ +T + L+N       GL  + +I +A  LF  M+ 
Sbjct: 23  SNHDHFHFAFSVLGNMFKLGLQPNHVTFSTLLN-------GLSSKAKIIDAVKLFDEMVK 75

Query: 146 FGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCK 205
            G  PDVITY T+ING C+ G+ ++A++L KKM     E G   K N+  YS IIDSLCK
Sbjct: 76  MGYEPDVITYSTIINGLCKMGSTTMAIQLLKKM----EEKG--CKPNVVVYSTIIDSLCK 129

Query: 206 EGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLT 265
           + L+ +A E   EM  RGI+P VV  ++++HGFC  G   E   LF +M++    P+ +T
Sbjct: 130 DKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVERNVMPDTVT 189

Query: 266 FNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMH 325
           FN+++D L K G I EA  + E MI++G+ P+  TYN+LMDGYC   ++D A+++F  M 
Sbjct: 190 FNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLFNIMV 249

Query: 326 SKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAG 385
            KGC  +V SYNILI G+CK   ++EA  L  ++    +    +TY+TL+ G  Q G+  
Sbjct: 250 RKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQ 309

Query: 386 YAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLI 445
            AQKL +EM+ Y + PDL TY+I++DGLCK   + EA +L   ++ +K E  I I+  LI
Sbjct: 310 DAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQESKIEPNIFIYTILI 369

Query: 446 DGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCA 505
            G+C  G+L+ A ELF  L  KG+ P VVTY++MI GL + G   +A +    M  +GC 
Sbjct: 370 QGMCNFGKLEAARELFSNLFVKGIQPDVVTYTVMISGLLKGGLSNEACELFRDMAVHGCL 429

Query: 506 PNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDE 559
           PN  T+N ++ GFL+N  TS    L+ +M    R    D +TF ++ DL ++DE
Sbjct: 430 PNSCTYNVIIQGFLRNGDTSNAGRLIEEMV--GRGFSADSSTFQMLSDLESRDE 481



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 121/362 (33%), Positives = 198/362 (54%), Gaps = 10/362 (2%)

Query: 224 INPAVVVCTTLIHGFCCAGNWEEVNGLFI---EMLDLGPRPNLLTFNVMIDCLCKGGKIN 280
           I P V   T LI+ FC + N +  +  F     M  LG +PN +TF+ +++ L    KI 
Sbjct: 6   IRPDVYTLTILINCFCHS-NHDHFHFAFSVLGNMFKLGLQPNHVTFSTLLNGLSSKAKII 64

Query: 281 EANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILI 340
           +A  L + M++ G  PD  TY+++++G C +G    A ++   M  KGCK  VV Y+ +I
Sbjct: 65  DAVKLFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTII 124

Query: 341 NGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVE 400
           +  CK   + EAM    ++++ G+   V+TY+++L G    G++  A  LF +M   NV 
Sbjct: 125 DSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVERNVM 184

Query: 401 PDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWEL 460
           PD  T+NIL+DGL K   + EA  +F  +     E  +  +N L+DG C   ++D A +L
Sbjct: 185 PDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKL 244

Query: 461 FHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQ 520
           F+ + +KG  P+V +Y+I+I G C+ G++++A   L  M      P+ VT++TLM GF Q
Sbjct: 245 FNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQ 304

Query: 521 NNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAK----DEKYHECSAVSKSSYRACL 576
           + +     +LL +M      L+PD  T+SIV+D L K    DE +    A+ +S     +
Sbjct: 305 DGRPQDAQKLLEEMRS--YGLLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQESKIEPNI 362

Query: 577 YV 578
           ++
Sbjct: 363 FI 364



 Score =  211 bits (538), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 143/489 (29%), Positives = 232/489 (47%), Gaps = 28/489 (5%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFN-LLFGAVAKNRHYDAVISFYRKLVSIGLL 107
           C S   + + A    G M  +   P   +F+ LL G  +K +  DAV   + ++V +G  
Sbjct: 21  CHSNHDHFHFAFSVLGNMFKLGLQPNHVTFSTLLNGLSSKAKIIDAV-KLFDEMVKMGYE 79

Query: 108 PDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGN 167
           PD +T + +IN       GLC       A  L K M   G +P+V+ Y T+I+  C+   
Sbjct: 80  PDVITYSTIIN-------GLCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTIIDSLCKDKL 132

Query: 168 LSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPA 227
           ++ A+    +MV     N  IS  N+ +YS I+   C  G  ++A  LF +M  R + P 
Sbjct: 133 ITEAMEFLSEMV-----NRGISP-NVVTYSSILHGFCNLGRSNEATSLFKQMVERNVMPD 186

Query: 228 VVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLE 287
            V    L+ G    G   E   +F  M++ G  PN+ T+N ++D  C   +++EA  L  
Sbjct: 187 TVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLFN 246

Query: 288 LMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKIL 347
           +M+++G  P   +YN L+ G+C  GRID A+ +   M  K      V+Y+ L+ G+C+  
Sbjct: 247 IMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDG 306

Query: 348 NVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYN 407
             ++A  L  ++ S G+   ++TY+ +L GL + G    A +L   M+   +EP++  Y 
Sbjct: 307 RPQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQESKIEPNIFIYT 366

Query: 408 ILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQK 467
           ILI G+C    ++ A +LF  L +   +  +  +  +I GL K G  + A ELF  +   
Sbjct: 367 ILIQGMCNFGKLEAARELFSNLFVKGIQPDVVTYTVMISGLLKGGLSNEACELFRDMAVH 426

Query: 468 GLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTL------------- 514
           G +P   TY+++I G  R G    A   +  M   G + +  TF  L             
Sbjct: 427 GCLPNSCTYNVIIQGFLRNGDTSNAGRLIEEMVGRGFSADSSTFQMLSDLESRDEIISLF 486

Query: 515 MHGFLQNNK 523
           MHG  Q  K
Sbjct: 487 MHGSSQGRK 495



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 65/211 (30%), Positives = 103/211 (48%), Gaps = 39/211 (18%)

Query: 394 MKLYNVEPDLSTYNILIDGLCKNNC----------------------------------- 418
           M L N+ PD+ T  ILI+  C +N                                    
Sbjct: 1   MDLSNIRPDVYTLTILINCFCHSNHDHFHFAFSVLGNMFKLGLQPNHVTFSTLLNGLSSK 60

Query: 419 --VQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTY 476
             + +AVKLF  +    +E  +  ++ +I+GLCK G    A +L  K+ +KG  P VV Y
Sbjct: 61  AKIIDAVKLFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVY 120

Query: 477 SIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAE 536
           S +I  LC+   + +A +FL  M   G +PNVVT+++++HGF    ++++   L  +M  
Sbjct: 121 STIIDSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMV- 179

Query: 537 PERNLVPDDTTFSIVVDLLAKDEKYHECSAV 567
            ERN++PD  TF+I+VD L+K+    E   V
Sbjct: 180 -ERNVMPDTVTFNILVDGLSKEGMILEAQCV 209


>gi|12324362|gb|AAG52154.1|AC022355_15 unknown protein; 19199-17308 [Arabidopsis thaliana]
          Length = 558

 Score =  352 bits (903), Expect = 3e-94,   Method: Compositional matrix adjust.
 Identities = 192/532 (36%), Positives = 302/532 (56%), Gaps = 38/532 (7%)

Query: 54  INLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVIS--FYRKLVSIGLLPDFL 111
           + L++A   FG M   +P P I  FN L  A+AK + +D VIS     K++ +G  P  +
Sbjct: 21  LKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLALLGKMMKLGYEPSIV 80

Query: 112 TLNILINCFGNKER----------------------------GLCVENRIKEATWLFKNM 143
           TL+ L+N + + +R                            GL + N+  EA  L   M
Sbjct: 81  TLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRM 140

Query: 144 IAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSL 203
           +  G +P+++TYG ++NG C+ G++ +A  L  KM +   E       ++  ++ IIDSL
Sbjct: 141 VQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIE------ADVVIFNTIIDSL 194

Query: 204 CKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNL 263
           CK   VD A  LF EM+ +GI P VV  ++LI   C  G W + + L  +M++    PNL
Sbjct: 195 CKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNL 254

Query: 264 LTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLS 323
           +TFN +ID   K GK  EA  L + MI+R ++PD FTYNSL++G+C+  R+D A+++F  
Sbjct: 255 VTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEF 314

Query: 324 MHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQ 383
           M SK C   + +YN LI G+CK   VE+   L+R++   G+    +TY TL+ GLF  G 
Sbjct: 315 MVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGD 374

Query: 384 AGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNC 443
              AQK+F +M    V PD+ TY+IL+DGLC N  +++A+++F  ++ ++ +  I I+  
Sbjct: 375 CDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTT 434

Query: 444 LIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNG 503
           +I+G+CKAG++D+ W+LF  L  KG+ P VVTY+ MI GLC K  L++A   L  M+++G
Sbjct: 435 MIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDG 494

Query: 504 CAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLL 555
             P+  T+NTL+   L++   +   EL+ +M       V D +T  +V ++L
Sbjct: 495 PLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCR--FVGDASTIGLVANML 544


>gi|224125496|ref|XP_002319601.1| predicted protein [Populus trichocarpa]
 gi|222857977|gb|EEE95524.1| predicted protein [Populus trichocarpa]
          Length = 460

 Score =  351 bits (901), Expect = 6e-94,   Method: Compositional matrix adjust.
 Identities = 190/459 (41%), Positives = 276/459 (60%), Gaps = 15/459 (3%)

Query: 101 LVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLIN 160
           +  +GL P  +T N L++       GLC + +I +A  LF  M+  G  PDVITY T+IN
Sbjct: 1   MFKLGLQPTLVTFNTLLS-------GLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIIN 53

Query: 161 GFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMK 220
           G C+ GN ++AL+L KKM     E G   K N+ +Y+ IIDSLCK+ LV +A + F EM 
Sbjct: 54  GLCKMGNTTMALQLLKKM----EEKG--CKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMV 107

Query: 221 GRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKIN 280
             GI P V   ++++HGFC  G   E   LF +M++    PN +TF ++ID LCK   I+
Sbjct: 108 KEGIPPDVFTYSSILHGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMIS 167

Query: 281 EANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILI 340
           EA  + E M ++GL PD +TYN+L+DGYC   ++D A+++F  M  KGC   V SYNILI
Sbjct: 168 EAWLVFETMTEKGLEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILI 227

Query: 341 NGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVE 400
           NG+CK   ++EA  L  ++    +   + TY+TL+ G  Q G+   AQ+L  EM  Y + 
Sbjct: 228 NGHCKSGRIDEAKGLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLL 287

Query: 401 PDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWEL 460
           P+L TY+I++DGLCK+  + EA +L   ++ +K E  I I+  LI+G+C  G+L+ A EL
Sbjct: 288 PNLITYSIVLDGLCKHGHLDEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAAREL 347

Query: 461 FHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQ 520
           F  L  KG+ PTVVTY++MI GL + G   +A +    M  NGC PN  T+N ++ GFL+
Sbjct: 348 FSNLFVKGIQPTVVTYTVMISGLLKGGLSNEACELFREMAVNGCLPNSCTYNVIIQGFLR 407

Query: 521 NNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDE 559
           N  T   V L+ +M    +    D +TF ++ DL + DE
Sbjct: 408 NGDTPNAVRLIEEMV--GKGFSADSSTFRMLSDLESSDE 444



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 114/329 (34%), Positives = 183/329 (55%), Gaps = 6/329 (1%)

Query: 254 MLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGR 313
           M  LG +P L+TFN ++  LC   KI +A  L + M++ G  PD  TY+++++G C +G 
Sbjct: 1   MFKLGLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGN 60

Query: 314 IDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNT 373
              A ++   M  KGCK  VV+YN +I+  CK   V EAM  + +++  G+   V TY++
Sbjct: 61  TTMALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSS 120

Query: 374 LLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNK 433
           +L G    G+   A  LF +M   NV P+  T+ ILIDGLCK   + EA  +F  +    
Sbjct: 121 ILHGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKG 180

Query: 434 FEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKAN 493
            E  +  +N L+DG C   ++D A +LF+ + +KG  P V +Y+I+I+G C+ G++++A 
Sbjct: 181 LEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAK 240

Query: 494 DFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
             L  M      P++ T++TLM GF Q  +  +  ELL +M      L+P+  T+SIV+D
Sbjct: 241 GLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCS--YGLLPNLITYSIVLD 298

Query: 554 LLAK----DEKYHECSAVSKSSYRACLYV 578
            L K    DE +    A+ +S     +++
Sbjct: 299 GLCKHGHLDEAFELLKAMQESKIEPNIFI 327



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 134/437 (30%), Positives = 225/437 (51%), Gaps = 36/437 (8%)

Query: 72  SPPISSFN-LLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCF---GN----- 122
            P + +FN LL G  +K +  DAV   + ++V +G  PD +T + +IN     GN     
Sbjct: 7   QPTLVTFNTLLSGLCSKAKIMDAV-KLFDEMVKMGHEPDVITYSTIINGLCKMGNTTMAL 65

Query: 123 ------KERG--------------LCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGF 162
                 +E+G              LC +  + EA   F  M+  G+ PDV TY ++++GF
Sbjct: 66  QLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSILHGF 125

Query: 163 CRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGR 222
           C  G ++ A  L K+MV    E  +I   N  +++I+ID LCK+ ++ +A  +F  M  +
Sbjct: 126 CNLGRVNEATSLFKQMV----ERNVIP--NKVTFTILIDGLCKKRMISEAWLVFETMTEK 179

Query: 223 GINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEA 282
           G+ P V     L+ G+C     +E   LF  M   G  PN+ ++N++I+  CK G+I+EA
Sbjct: 180 GLEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEA 239

Query: 283 NGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILING 342
            GLL  M  + L PD FTY++LM G+C VGR   A+E+   M S G    +++Y+I+++G
Sbjct: 240 KGLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDG 299

Query: 343 YCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPD 402
            CK  +++EA  L + +  + +   +  Y  L+ G+   G+   A++LF  + +  ++P 
Sbjct: 300 LCKHGHLDEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQPT 359

Query: 403 LSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFH 462
           + TY ++I GL K     EA +LF  + +N        +N +I G  + G   NA  L  
Sbjct: 360 VVTYTVMISGLLKGGLSNEACELFREMAVNGCLPNSCTYNVIIQGFLRNGDTPNAVRLIE 419

Query: 463 KLPQKGLVPTVVTYSIM 479
           ++  KG      T+ ++
Sbjct: 420 EMVGKGFSADSSTFRML 436



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 120/391 (30%), Positives = 193/391 (49%), Gaps = 36/391 (9%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CK G  N   A      M      P + ++N +  ++ K+R     + F+ ++V  G+ P
Sbjct: 56  CKMG--NTTMALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPP 113

Query: 109 DFLTLNILINCFGNKER----------------------------GLCVENRIKEATWLF 140
           D  T + +++ F N  R                            GLC +  I EA  +F
Sbjct: 114 DVFTYSSILHGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVF 173

Query: 141 KNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIII 200
           + M   G+ PDV TY  L++G+C    +  A +L   M   D +       N+ SY+I+I
Sbjct: 174 ETMTEKGLEPDVYTYNALVDGYCSRSQMDEAQKLFNIM---DRKG---CAPNVRSYNILI 227

Query: 201 DSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPR 260
           +  CK G +D+AK L  EM  + + P +   +TL+ GFC  G  +E   L  EM   G  
Sbjct: 228 NGHCKSGRIDEAKGLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLL 287

Query: 261 PNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREI 320
           PNL+T+++++D LCK G ++EA  LL+ M +  + P+ F Y  L++G C  G+++ ARE+
Sbjct: 288 PNLITYSIVLDGLCKHGHLDEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAAREL 347

Query: 321 FLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQ 380
           F ++  KG + TVV+Y ++I+G  K     EA  L+R++  NG      TYN ++ G  +
Sbjct: 348 FSNLFVKGIQPTVVTYTVMISGLLKGGLSNEACELFREMAVNGCLPNSCTYNVIIQGFLR 407

Query: 381 AGQAGYAQKLFDEMKLYNVEPDLSTYNILID 411
            G    A +L +EM       D ST+ +L D
Sbjct: 408 NGDTPNAVRLIEEMVGKGFSADSSTFRMLSD 438


>gi|145336953|ref|NP_176455.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806497|sp|Q3ECK2.2|PPR92_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62680, mitochondrial; Flags: Precursor
 gi|332195872|gb|AEE33993.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 548

 Score =  350 bits (897), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 185/481 (38%), Positives = 271/481 (56%), Gaps = 21/481 (4%)

Query: 54  INLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTL 113
           I LN+A   F  M   +P P I  FN L  A+ K + YD VIS  +K+  +G+  D  T 
Sbjct: 64  IKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTF 123

Query: 114 NILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALR 173
           NI+INCF       C   ++  A  +   M+  G  PD +T G+L+NGFCR   +S A+ 
Sbjct: 124 NIVINCF-------CCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVS 176

Query: 174 LHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTT 233
           L  KMV   Y      K +I +Y+ IIDSLCK   V+ A + F E++ +GI P VV  T 
Sbjct: 177 LVDKMVEIGY------KPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTA 230

Query: 234 LIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRG 293
           L++G C +  W +   L  +M+     PN++T++ ++D   K GK+ EA  L E M++  
Sbjct: 231 LVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMS 290

Query: 294 LNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAM 353
           ++PD  TY+SL++G CL  RID A ++F  M SKGC   VVSYN LING+CK   VE+ M
Sbjct: 291 IDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGM 350

Query: 354 SLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGL 413
            L+R++   G+    +TYNTL+ G FQAG    AQ+ F +M  + + PD+ TYNIL+ GL
Sbjct: 351 KLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGL 410

Query: 414 CKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTV 473
           C N  +++A+ +F  ++  + +  I  +  +I G+CK G+++ AW LF  L  KGL P +
Sbjct: 411 CDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDI 470

Query: 474 VTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHK 533
           VTY+ M+ GLC KG L +       M++ G   N  T        L +   +   EL+ K
Sbjct: 471 VTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCT--------LSDGDITLSAELIKK 522

Query: 534 M 534
           M
Sbjct: 523 M 523



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 128/441 (29%), Positives = 218/441 (49%), Gaps = 25/441 (5%)

Query: 48  NCKSGIINLNEARYFFGYMTHMQPSPP-ISSFNLLFGAVAKNRHYDAVISFYRKLVSIGL 106
           NC      ++ A    G M  +   P  ++  +L+ G   +NR  DAV S   K+V IG 
Sbjct: 128 NCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAV-SLVDKMVEIGY 186

Query: 107 LPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTG 166
            PD +  N +I+        LC   R+ +A   FK +   G+RP+V+TY  L+NG C + 
Sbjct: 187 KPDIVAYNAIID-------SLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSS 239

Query: 167 NLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINP 226
             S A RL   M+            N+ +YS ++D+  K G V +AKELF EM    I+P
Sbjct: 240 RWSDAARLLSDMIKKKIT------PNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDP 293

Query: 227 AVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLL 286
            +V  ++LI+G C     +E N +F  M+  G   +++++N +I+  CK  ++ +   L 
Sbjct: 294 DIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLF 353

Query: 287 ELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKI 346
             M QRGL  +  TYN+L+ G+   G +D A+E F  M   G    + +YNIL+ G C  
Sbjct: 354 REMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDN 413

Query: 347 LNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTY 406
             +E+A+ ++  +    +   ++TY T++ G+ + G+   A  LF  + L  ++PD+ TY
Sbjct: 414 GELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTY 473

Query: 407 NILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQ 466
             ++ GLC    + E   L+  ++      G+   +C +      G +  + EL  K+  
Sbjct: 474 TTMMSGLCTKGLLHEVEALYTKMKQE----GLMKNDCTLSD----GDITLSAELIKKMLS 525

Query: 467 KGLVPTVVTYSIMIHGLCRKG 487
            G  P+++    +  G+C+K 
Sbjct: 526 CGYAPSLL--KDIKSGVCKKA 544



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 108/372 (29%), Positives = 199/372 (53%), Gaps = 2/372 (0%)

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
           +I  ++ ++ ++ K    D    L  +M+  GI   +     +I+ FCC         + 
Sbjct: 84  SIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSIL 143

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
            +ML LG  P+ +T   +++  C+  ++++A  L++ M++ G  PD   YN+++D  C  
Sbjct: 144 GKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKT 203

Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
            R++ A + F  +  KG +  VV+Y  L+NG C      +A  L   +I   +   VITY
Sbjct: 204 KRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITY 263

Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
           + LL    + G+   A++LF+EM   +++PD+ TY+ LI+GLC ++ + EA ++F ++  
Sbjct: 264 SALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVS 323

Query: 432 NKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEK 491
                 +  +N LI+G CKA R+++  +LF ++ Q+GLV   VTY+ +I G  + G ++K
Sbjct: 324 KGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDK 383

Query: 492 ANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIV 551
           A +F   M+  G +P++ T+N L+ G   N +  K + +   M + E +L  D  T++ V
Sbjct: 384 AQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDL--DIVTYTTV 441

Query: 552 VDLLAKDEKYHE 563
           +  + K  K  E
Sbjct: 442 IRGMCKTGKVEE 453



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 116/436 (26%), Positives = 220/436 (50%), Gaps = 8/436 (1%)

Query: 132 RIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKT 191
           ++ +A  LF +M+     P ++ +  L++   +     V + L KKM        L  + 
Sbjct: 65  KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKM------EVLGIRN 118

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
           ++++++I+I+  C    V  A  +  +M   G  P  V   +L++GFC      +   L 
Sbjct: 119 DLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLV 178

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
            +M+++G +P+++ +N +ID LCK  ++N+A    + + ++G+ P+  TY +L++G C  
Sbjct: 179 DKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNS 238

Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
            R   A  +   M  K     V++Y+ L++ + K   V EA  L+ +++   +   ++TY
Sbjct: 239 SRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTY 298

Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
           ++L++GL    +   A ++FD M       D+ +YN LI+G CK   V++ +KLF  +  
Sbjct: 299 SSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQ 358

Query: 432 NKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEK 491
                    +N LI G  +AG +D A E F ++   G+ P + TY+I++ GLC  G+LEK
Sbjct: 359 RGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEK 418

Query: 492 ANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIV 551
           A      M+K     ++VT+ T++ G  +  K  +   L   ++   + L PD  T++ +
Sbjct: 419 ALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLS--LKGLKPDIVTYTTM 476

Query: 552 VDLLAKDEKYHECSAV 567
           +  L      HE  A+
Sbjct: 477 MSGLCTKGLLHEVEAL 492



 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 63/242 (26%), Positives = 122/242 (50%), Gaps = 6/242 (2%)

Query: 347 LNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTY 406
           + + +A+ L+  ++ +    +++ +N LLS + +  +      L  +M++  +  DL T+
Sbjct: 64  IKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTF 123

Query: 407 NILIDGLCKNNCVQEAVKLFHMLEMNK--FEFGIEIFNCLIDGLCKAGRLDNAWELFHKL 464
           NI+I+  C   C Q ++ L  + +M K  +E        L++G C+  R+ +A  L  K+
Sbjct: 124 NIVINCFC--CCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 181

Query: 465 PQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKT 524
            + G  P +V Y+ +I  LC+  ++  A DF   +E+ G  PNVVT+  L++G   +++ 
Sbjct: 182 VEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRW 241

Query: 525 SKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKSSYRACLYVTIFQPS 584
           S    LL  M +  + + P+  T+S ++D   K+ K  E   + +   R  +   I   S
Sbjct: 242 SDAARLLSDMIK--KKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYS 299

Query: 585 SL 586
           SL
Sbjct: 300 SL 301


>gi|6630464|gb|AAF19552.1|AC007190_20 F23N19.4 [Arabidopsis thaliana]
          Length = 1244

 Score =  350 bits (897), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 185/481 (38%), Positives = 271/481 (56%), Gaps = 21/481 (4%)

Query: 54  INLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTL 113
           I LN+A   F  M   +P P I  FN L  A+ K + YD VIS  +K+  +G+  D  T 
Sbjct: 167 IKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTF 226

Query: 114 NILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALR 173
           NI+INCF       C   ++  A  +   M+  G  PD +T G+L+NGFCR   +S A+ 
Sbjct: 227 NIVINCF-------CCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVS 279

Query: 174 LHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTT 233
           L  KMV   Y      K +I +Y+ IIDSLCK   V+ A + F E++ +GI P VV  T 
Sbjct: 280 LVDKMVEIGY------KPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTA 333

Query: 234 LIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRG 293
           L++G C +  W +   L  +M+     PN++T++ ++D   K GK+ EA  L E M++  
Sbjct: 334 LVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMS 393

Query: 294 LNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAM 353
           ++PD  TY+SL++G CL  RID A ++F  M SKGC   VVSYN LING+CK   VE+ M
Sbjct: 394 IDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGM 453

Query: 354 SLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGL 413
            L+R++   G+    +TYNTL+ G FQAG    AQ+ F +M  + + PD+ TYNIL+ GL
Sbjct: 454 KLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGL 513

Query: 414 CKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTV 473
           C N  +++A+ +F  ++  + +  I  +  +I G+CK G+++ AW LF  L  KGL P +
Sbjct: 514 CDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDI 573

Query: 474 VTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHK 533
           VTY+ M+ GLC KG L +       M++ G   N  T        L +   +   EL+ K
Sbjct: 574 VTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCT--------LSDGDITLSAELIKK 625

Query: 534 M 534
           M
Sbjct: 626 M 626



 Score =  345 bits (886), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 193/565 (34%), Positives = 296/565 (52%), Gaps = 71/565 (12%)

Query: 54   INLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTL 113
            + L++A   FG M   +P P I  F+ L  A+AK   +D VIS   ++ ++G+  +  T 
Sbjct: 674  LKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTY 733

Query: 114  NILINCFGNKER----------------------------GLCVENRIKEAT-------- 137
            +ILINCF  + +                            G C   RI EA         
Sbjct: 734  SILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFV 793

Query: 138  ---------------------------WLFKNMIAFGVRPDVITYGTLINGFCRTGNLSV 170
                                        L   M+A G +PD++TYG ++NG C+ G+  +
Sbjct: 794  TGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDL 853

Query: 171  ALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVV 230
            A  L  KM  G  E G      +  Y+ IID LCK   +D A  LF EM+ +GI P VV 
Sbjct: 854  AFNLLNKMEQGKLEPG------VLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVT 907

Query: 231  CTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMI 290
             ++LI   C  G W + + L  +M++    P++ TF+ +ID   K GK+ EA  L + M+
Sbjct: 908  YSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMV 967

Query: 291  QRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVE 350
            +R ++P   TY+SL++G+C+  R+D A+++F  M SK C   VV+YN LI G+CK   VE
Sbjct: 968  KRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVE 1027

Query: 351  EAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILI 410
            E M ++R++   G+    +TYN L+ GLFQAG    AQ++F EM    V P++ TYN L+
Sbjct: 1028 EGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLL 1087

Query: 411  DGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLV 470
            DGLCKN  +++A+ +F  L+ +K E  I  +N +I+G+CKAG++++ W+LF  L  KG+ 
Sbjct: 1088 DGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVK 1147

Query: 471  PTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVEL 530
            P VV Y+ MI G CRKG  E+A+     M+++G  PN   +NTL+   L++       EL
Sbjct: 1148 PDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAEL 1207

Query: 531  LHKMAEPERNLVPDDTTFSIVVDLL 555
            + +M         D +T  +V ++L
Sbjct: 1208 IKEMRSC--GFAGDASTIGLVTNML 1230



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 126/452 (27%), Positives = 227/452 (50%), Gaps = 8/452 (1%)

Query: 130  ENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLIS 189
            E ++ +A  LF  M+     P +I +  L++   +     V + L ++M        L  
Sbjct: 673  ELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQM------QNLGI 726

Query: 190  KTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNG 249
              N ++YSI+I+  C+   +  A  +  +M   G  P +V  ++L++G+C +    E   
Sbjct: 727  PHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVA 786

Query: 250  LFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYC 309
            L  +M   G +PN +TFN +I  L    K +EA  L++ M+ +G  PD  TY  +++G C
Sbjct: 787  LVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLC 846

Query: 310  LVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVI 369
              G  D A  +   M     +  V+ YN +I+G CK  ++++A++L++++ + G+R  V+
Sbjct: 847  KRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVV 906

Query: 370  TYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHML 429
            TY++L+S L   G+   A +L  +M    + PD+ T++ LID   K   + EA KL+  +
Sbjct: 907  TYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEM 966

Query: 430  EMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKL 489
                 +  I  ++ LI+G C   RLD A ++F  +  K   P VVTY+ +I G C+  ++
Sbjct: 967  VKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRV 1026

Query: 490  EKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFS 549
            E+  +    M + G   N VT+N L+ G  Q        E+  +M      + P+  T++
Sbjct: 1027 EEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSD--GVPPNIMTYN 1084

Query: 550  IVVDLLAKDEKYHECSAVSKSSYRACLYVTIF 581
             ++D L K+ K  +   V +   R+ +  TI+
Sbjct: 1085 TLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIY 1116



 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 154/608 (25%), Positives = 267/608 (43%), Gaps = 104/608 (17%)

Query: 48  NCKSGIINLNEARYFFGYMTHMQPSPP-ISSFNLLFGAVAKNRHYDAVISFYRKLVSIGL 106
           NC      ++ A    G M  +   P  ++  +L+ G   +NR  DAV S   K+V IG 
Sbjct: 231 NCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAV-SLVDKMVEIGY 289

Query: 107 LPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTG 166
            PD +  N +I+        LC   R+ +A   FK +   G+RP+V+TY  L+NG C + 
Sbjct: 290 KPDIVAYNAIID-------SLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSS 342

Query: 167 NLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINP 226
             S A RL   M+            N+ +YS ++D+  K G V +AKELF EM    I+P
Sbjct: 343 RWSDAARLLSDMIKKKI------TPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDP 396

Query: 227 AVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLL 286
            +V  ++LI+G C     +E N +F  M+  G   +++++N +I+  CK  ++ +   L 
Sbjct: 397 DIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLF 456

Query: 287 ELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKI 346
             M QRGL  +  TYN+L+ G+   G +D A+E F  M   G    + +YNIL+ G C  
Sbjct: 457 REMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDN 516

Query: 347 LNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTY 406
             +E+A+ ++  +    +   ++TY T++ G+ + G+   A  LF  + L  ++PD+ TY
Sbjct: 517 GELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTY 576

Query: 407 NILIDGLCKNNCVQEAVKLFHMLEMNKF----------------EFGIEIFNC------- 443
             ++ GLC    + E   L+  ++                    E   ++ +C       
Sbjct: 577 TTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLSDGDITLSAELIKKMLSCGYAPSLL 636

Query: 444 --LIDGLCKAG---------------------------RLDNAWELFHKLPQKGLVPTVV 474
             +  G+CK                             +LD+A  LF ++ +    P+++
Sbjct: 637 KDIKSGVCKKALSLLRAFSGKTSYDYREKLSRNGLSELKLDDAVALFGEMVKSRPFPSII 696

Query: 475 TYSIMIHGL-----------------------------------CRKGKLEKANDFLLYM 499
            +S ++  +                                   CR+ +L  A   L  M
Sbjct: 697 EFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKM 756

Query: 500 EKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDE 559
            K G  PN+VT ++L++G+  + + S+ V L+ +M        P+  TF+ ++  L    
Sbjct: 757 MKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVT--GYQPNTVTFNTLIHGLFLHN 814

Query: 560 KYHECSAV 567
           K  E  A+
Sbjct: 815 KASEAMAL 822



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 108/372 (29%), Positives = 199/372 (53%), Gaps = 2/372 (0%)

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
           +I  ++ ++ ++ K    D    L  +M+  GI   +     +I+ FCC         + 
Sbjct: 187 SIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSIL 246

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
            +ML LG  P+ +T   +++  C+  ++++A  L++ M++ G  PD   YN+++D  C  
Sbjct: 247 GKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKT 306

Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
            R++ A + F  +  KG +  VV+Y  L+NG C      +A  L   +I   +   VITY
Sbjct: 307 KRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITY 366

Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
           + LL    + G+   A++LF+EM   +++PD+ TY+ LI+GLC ++ + EA ++F ++  
Sbjct: 367 SALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVS 426

Query: 432 NKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEK 491
                 +  +N LI+G CKA R+++  +LF ++ Q+GLV   VTY+ +I G  + G ++K
Sbjct: 427 KGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDK 486

Query: 492 ANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIV 551
           A +F   M+  G +P++ T+N L+ G   N +  K + +   M + E +L  D  T++ V
Sbjct: 487 AQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDL--DIVTYTTV 544

Query: 552 VDLLAKDEKYHE 563
           +  + K  K  E
Sbjct: 545 IRGMCKTGKVEE 556



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 116/436 (26%), Positives = 220/436 (50%), Gaps = 8/436 (1%)

Query: 132 RIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKT 191
           ++ +A  LF +M+     P ++ +  L++   +     V + L KKM        L  + 
Sbjct: 168 KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKM------EVLGIRN 221

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
           ++++++I+I+  C    V  A  +  +M   G  P  V   +L++GFC      +   L 
Sbjct: 222 DLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLV 281

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
            +M+++G +P+++ +N +ID LCK  ++N+A    + + ++G+ P+  TY +L++G C  
Sbjct: 282 DKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNS 341

Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
            R   A  +   M  K     V++Y+ L++ + K   V EA  L+ +++   +   ++TY
Sbjct: 342 SRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTY 401

Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
           ++L++GL    +   A ++FD M       D+ +YN LI+G CK   V++ +KLF  +  
Sbjct: 402 SSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQ 461

Query: 432 NKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEK 491
                    +N LI G  +AG +D A E F ++   G+ P + TY+I++ GLC  G+LEK
Sbjct: 462 RGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEK 521

Query: 492 ANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIV 551
           A      M+K     ++VT+ T++ G  +  K  +   L   ++   + L PD  T++ +
Sbjct: 522 ALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLS--LKGLKPDIVTYTTM 579

Query: 552 VDLLAKDEKYHECSAV 567
           +  L      HE  A+
Sbjct: 580 MSGLCTKGLLHEVEAL 595



 Score =  188 bits (478), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 150/588 (25%), Positives = 261/588 (44%), Gaps = 86/588 (14%)

Query: 24  LFKSPRQIAAVSSPETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFG 83
           LF+   Q   VS+  T  N  +    ++G  ++++A+ FF  M     SP I ++N+L G
Sbjct: 455 LFREMSQRGLVSNTVT-YNTLIQGFFQAG--DVDKAQEFFSQMDFFGISPDIWTYNILLG 511

Query: 84  AVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNM 143
            +  N   +  +  +  +    +  D +T   +I       RG+C   +++EA  LF ++
Sbjct: 512 GLCDNGELEKALVIFEDMQKREMDLDIVTYTTVI-------RGMCKTGKVEEAWSLFCSL 564

Query: 144 IAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSL 203
              G++PD++TY T+++G C  G L     L+ KM     + GL+            D  
Sbjct: 565 SLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKM----KQEGLMKN----------DCT 610

Query: 204 CKEGLVDKAKELFLEMKGRGINPAVV------VCT---TLIHGFCCAGNWE--------- 245
             +G +  + EL  +M   G  P+++      VC    +L+  F    +++         
Sbjct: 611 LSDGDITLSAELIKKMLSCGYAPSLLKDIKSGVCKKALSLLRAFSGKTSYDYREKLSRNG 670

Query: 246 -------EVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDR 298
                  +   LF EM+   P P+++ F+ ++  + K  K +    L E M   G+  + 
Sbjct: 671 LSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNH 730

Query: 299 FTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQ 358
           +TY+ L++ +C   ++  A  +   M   G +  +V+ + L+NGYC    + EA++L  Q
Sbjct: 731 YTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQ 790

Query: 359 IISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNC 418
           +   G +   +T+NTL+ GLF   +A  A  L D M     +PDL TY ++++G      
Sbjct: 791 MFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNG------ 844

Query: 419 VQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSI 478
                                        LCK G  D A+ L +K+ Q  L P V+ Y+ 
Sbjct: 845 -----------------------------LCKRGDTDLAFNLLNKMEQGKLEPGVLIYNT 875

Query: 479 MIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPE 538
           +I GLC+   ++ A +    ME  G  PNVVT+++L+       + S    LL  M E  
Sbjct: 876 IIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIE-- 933

Query: 539 RNLVPDDTTFSIVVDLLAKDEKYHECSAVSKSSYRACLYVTIFQPSSL 586
           R + PD  TFS ++D   K+ K  E   +     +  +  +I   SSL
Sbjct: 934 RKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSL 981



 Score = 98.6 bits (244), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 63/242 (26%), Positives = 122/242 (50%), Gaps = 6/242 (2%)

Query: 347 LNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTY 406
           + + +A+ L+  ++ +    +++ +N LLS + +  +      L  +M++  +  DL T+
Sbjct: 167 IKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTF 226

Query: 407 NILIDGLCKNNCVQEAVKLFHMLEMNK--FEFGIEIFNCLIDGLCKAGRLDNAWELFHKL 464
           NI+I+  C   C Q ++ L  + +M K  +E        L++G C+  R+ +A  L  K+
Sbjct: 227 NIVINCFC--CCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 284

Query: 465 PQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKT 524
            + G  P +V Y+ +I  LC+  ++  A DF   +E+ G  PNVVT+  L++G   +++ 
Sbjct: 285 VEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRW 344

Query: 525 SKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKSSYRACLYVTIFQPS 584
           S    LL  M +  + + P+  T+S ++D   K+ K  E   + +   R  +   I   S
Sbjct: 345 SDAARLLSDMIK--KKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYS 402

Query: 585 SL 586
           SL
Sbjct: 403 SL 404



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 63/250 (25%), Positives = 108/250 (43%), Gaps = 36/250 (14%)

Query: 56   LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNI 115
            L+EA+  F +M      P + ++N L     K +  +  +  +R++   GL+ + +T NI
Sbjct: 991  LDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNI 1050

Query: 116  LINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRL- 174
            LI       +GL        A  +FK M++ GV P+++TY TL++G C+ G L  A+ + 
Sbjct: 1051 LI-------QGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVF 1103

Query: 175  --------------HKKMVSGDYENGLIS--------------KTNIFSYSIIIDSLCKE 206
                          +  M+ G  + G +               K ++ +Y+ +I   C++
Sbjct: 1104 EYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRK 1163

Query: 207  GLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTF 266
            G  ++A  LF EMK  G  P      TLI      G+ E    L  EM   G   +  T 
Sbjct: 1164 GSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTI 1223

Query: 267  NVMIDCLCKG 276
             ++ + L  G
Sbjct: 1224 GLVTNMLHDG 1233


>gi|110741592|dbj|BAE98744.1| PPR-repeat protein [Arabidopsis thaliana]
          Length = 548

 Score =  350 bits (897), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 185/481 (38%), Positives = 271/481 (56%), Gaps = 21/481 (4%)

Query: 54  INLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTL 113
           I LN+A   F  M   +P P I  FN L  A+ K + YD VIS  +K+  +G+  D  T 
Sbjct: 64  IKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTF 123

Query: 114 NILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALR 173
           NI+INCF       C   ++  A  +   M+  G  PD +T G+L+NGFCR   +S A+ 
Sbjct: 124 NIVINCF-------CCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVS 176

Query: 174 LHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTT 233
           L  KMV   Y      K +I +Y+ IIDSLCK   V+ A + F E++ +GI P VV  T 
Sbjct: 177 LVDKMVEIGY------KPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTA 230

Query: 234 LIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRG 293
           L++G C +  W +   L  +M+     PN++T++ ++D   K GK+ EA  L E M++  
Sbjct: 231 LVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMS 290

Query: 294 LNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAM 353
           ++PD  TY+SL++G CL  RID A ++F  M SKGC   VVSYN LING+CK   VE+ M
Sbjct: 291 IDPDIVTYSSLVNGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGM 350

Query: 354 SLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGL 413
            L+R++   G+    +TYNTL+ G FQAG    AQ+ F +M  + + PD+ TYNIL+ GL
Sbjct: 351 KLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGL 410

Query: 414 CKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTV 473
           C N  +++A+ +F  ++  + +  I  +  +I G+CK G+++ AW LF  L  KGL P +
Sbjct: 411 CDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDI 470

Query: 474 VTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHK 533
           VTY+ M+ GLC KG L +       M++ G   N  T        L +   +   EL+ K
Sbjct: 471 VTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCT--------LSDGDITLSAELIKK 522

Query: 534 M 534
           M
Sbjct: 523 M 523



 Score =  198 bits (504), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 127/441 (28%), Positives = 218/441 (49%), Gaps = 25/441 (5%)

Query: 48  NCKSGIINLNEARYFFGYMTHMQPSPP-ISSFNLLFGAVAKNRHYDAVISFYRKLVSIGL 106
           NC      ++ A    G M  +   P  ++  +L+ G   +NR  DAV S   K+V IG 
Sbjct: 128 NCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAV-SLVDKMVEIGY 186

Query: 107 LPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTG 166
            PD +  N +I+        LC   R+ +A   FK +   G+RP+V+TY  L+NG C + 
Sbjct: 187 KPDIVAYNAIID-------SLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSS 239

Query: 167 NLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINP 226
             S A RL   M+            N+ +YS ++D+  K G V +AKELF EM    I+P
Sbjct: 240 RWSDAARLLSDMIKKKIT------PNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDP 293

Query: 227 AVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLL 286
            +V  ++L++G C     +E N +F  M+  G   +++++N +I+  CK  ++ +   L 
Sbjct: 294 DIVTYSSLVNGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLF 353

Query: 287 ELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKI 346
             M QRGL  +  TYN+L+ G+   G +D A+E F  M   G    + +YNIL+ G C  
Sbjct: 354 REMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDN 413

Query: 347 LNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTY 406
             +E+A+ ++  +    +   ++TY T++ G+ + G+   A  LF  + L  ++PD+ TY
Sbjct: 414 GELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTY 473

Query: 407 NILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQ 466
             ++ GLC    + E   L+  ++      G+   +C +      G +  + EL  K+  
Sbjct: 474 TTMMSGLCTKGLLHEVEALYTKMKQE----GLMKNDCTLSD----GDITLSAELIKKMLS 525

Query: 467 KGLVPTVVTYSIMIHGLCRKG 487
            G  P+++    +  G+C+K 
Sbjct: 526 CGYAPSLL--KDIKSGVCKKA 544



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 107/372 (28%), Positives = 199/372 (53%), Gaps = 2/372 (0%)

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
           +I  ++ ++ ++ K    D    L  +M+  GI   +     +I+ FCC         + 
Sbjct: 84  SIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSIL 143

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
            +ML LG  P+ +T   +++  C+  ++++A  L++ M++ G  PD   YN+++D  C  
Sbjct: 144 GKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKT 203

Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
            R++ A + F  +  KG +  VV+Y  L+NG C      +A  L   +I   +   VITY
Sbjct: 204 KRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITY 263

Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
           + LL    + G+   A++LF+EM   +++PD+ TY+ L++GLC ++ + EA ++F ++  
Sbjct: 264 SALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNGLCLHDRIDEANQMFDLMVS 323

Query: 432 NKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEK 491
                 +  +N LI+G CKA R+++  +LF ++ Q+GLV   VTY+ +I G  + G ++K
Sbjct: 324 KGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDK 383

Query: 492 ANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIV 551
           A +F   M+  G +P++ T+N L+ G   N +  K + +   M + E +L  D  T++ V
Sbjct: 384 AQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDL--DIVTYTTV 441

Query: 552 VDLLAKDEKYHE 563
           +  + K  K  E
Sbjct: 442 IRGMCKTGKVEE 453



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 116/436 (26%), Positives = 220/436 (50%), Gaps = 8/436 (1%)

Query: 132 RIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKT 191
           ++ +A  LF +M+     P ++ +  L++   +     V + L KKM        L  + 
Sbjct: 65  KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKM------EVLGIRN 118

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
           ++++++I+I+  C    V  A  +  +M   G  P  V   +L++GFC      +   L 
Sbjct: 119 DLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLV 178

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
            +M+++G +P+++ +N +ID LCK  ++N+A    + + ++G+ P+  TY +L++G C  
Sbjct: 179 DKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNS 238

Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
            R   A  +   M  K     V++Y+ L++ + K   V EA  L+ +++   +   ++TY
Sbjct: 239 SRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTY 298

Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
           ++L++GL    +   A ++FD M       D+ +YN LI+G CK   V++ +KLF  +  
Sbjct: 299 SSLVNGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQ 358

Query: 432 NKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEK 491
                    +N LI G  +AG +D A E F ++   G+ P + TY+I++ GLC  G+LEK
Sbjct: 359 RGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEK 418

Query: 492 ANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIV 551
           A      M+K     ++VT+ T++ G  +  K  +   L   ++   + L PD  T++ +
Sbjct: 419 ALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLS--LKGLKPDIVTYTTM 476

Query: 552 VDLLAKDEKYHECSAV 567
           +  L      HE  A+
Sbjct: 477 MSGLCTKGLLHEVEAL 492



 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 67/266 (25%), Positives = 131/266 (49%), Gaps = 6/266 (2%)

Query: 347 LNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTY 406
           + + +A+ L+  ++ +    +++ +N LLS + +  +      L  +M++  +  DL T+
Sbjct: 64  IKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTF 123

Query: 407 NILIDGLCKNNCVQEAVKLFHMLEMNK--FEFGIEIFNCLIDGLCKAGRLDNAWELFHKL 464
           NI+I+  C   C Q ++ L  + +M K  +E        L++G C+  R+ +A  L  K+
Sbjct: 124 NIVINCFC--CCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 181

Query: 465 PQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKT 524
            + G  P +V Y+ +I  LC+  ++  A DF   +E+ G  PNVVT+  L++G   +++ 
Sbjct: 182 VEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRW 241

Query: 525 SKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKSSYRACLYVTIFQPS 584
           S    LL  M +  + + P+  T+S ++D   K+ K  E   + +   R  +   I   S
Sbjct: 242 SDAARLLSDMIK--KKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYS 299

Query: 585 SLGSMIGCTVRLMPQPEMSDTLGDDG 610
           SL + +    R+    +M D +   G
Sbjct: 300 SLVNGLCLHDRIDEANQMFDLMVSKG 325


>gi|15221691|ref|NP_176501.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169915|sp|Q9CAN0.1|PPR99_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g63130, mitochondrial; Flags: Precursor
 gi|12323261|gb|AAG51613.1|AC010795_17 unknown protein; 64081-65973 [Arabidopsis thaliana]
 gi|22136016|gb|AAM91590.1| unknown protein [Arabidopsis thaliana]
 gi|23197834|gb|AAN15444.1| unknown protein [Arabidopsis thaliana]
 gi|332195938|gb|AEE34059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 630

 Score =  349 bits (896), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 202/565 (35%), Positives = 302/565 (53%), Gaps = 71/565 (12%)

Query: 54  INLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVIS----------------- 96
           + L++A   FG M   +P P I  F+ L  A+AK   +D VIS                 
Sbjct: 60  LKLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTY 119

Query: 97  ------FYR------------KLVSIGLLPDFLTLNILIN--CFGNKE------------ 124
                 F R            K++ +G  PD +TLN L+N  C GN+             
Sbjct: 120 SILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVE 179

Query: 125 --------------RGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSV 170
                          GL   NR  EA  L   M+  G +PD++TYG ++NG C+ G++ +
Sbjct: 180 MGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDL 239

Query: 171 ALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVV 230
           AL L KKM  G  E G++       Y+ IID+LC    V+ A  LF EM  +GI P VV 
Sbjct: 240 ALSLLKKMEQGKIEPGVVI------YNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVT 293

Query: 231 CTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMI 290
             +LI   C  G W + + L  +M++    PN++TF+ +ID   K GK+ EA  L + MI
Sbjct: 294 YNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMI 353

Query: 291 QRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVE 350
           +R ++PD FTY+SL++G+C+  R+D A+ +F  M SK C   VV+YN LI G+CK   V+
Sbjct: 354 KRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVD 413

Query: 351 EAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILI 410
           E M L+R++   G+    +TY TL+ G FQA +   AQ +F +M    V PD+ TY+IL+
Sbjct: 414 EGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILL 473

Query: 411 DGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLV 470
           DGLC N  V+ A+ +F  L+ +K E  I  +N +I+G+CKAG++++ W+LF  L  KG+ 
Sbjct: 474 DGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVK 533

Query: 471 PTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVEL 530
           P VVTY+ M+ G CRKG  E+A+     M++ G  P+  T+NTL+   L++   +   EL
Sbjct: 534 PNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAEL 593

Query: 531 LHKMAEPERNLVPDDTTFSIVVDLL 555
           + +M       V D +T  +V ++L
Sbjct: 594 IREMRSCR--FVGDASTIGLVTNML 616



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 122/429 (28%), Positives = 221/429 (51%), Gaps = 8/429 (1%)

Query: 132 RIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKT 191
           ++ +A  LF +M+     P ++ +  L++   +     + + L ++M     +N  IS  
Sbjct: 61  KLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQM-----QNLGISH- 114

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
           N+++YSI+I+  C+   +  A  +  +M   G  P +V   +L++GFC      +   L 
Sbjct: 115 NLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLV 174

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
            +M+++G +P+  TFN +I  L +  + +EA  L++ M+ +G  PD  TY  +++G C  
Sbjct: 175 GQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKR 234

Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
           G ID A  +   M     +  VV YN +I+  C   NV +A++L+ ++ + G+R  V+TY
Sbjct: 235 GDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTY 294

Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
           N+L+  L   G+   A +L  +M    + P++ T++ LID   K   + EA KL+  +  
Sbjct: 295 NSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIK 354

Query: 432 NKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEK 491
              +  I  ++ LI+G C   RLD A  +F  +  K   P VVTY+ +I G C+  ++++
Sbjct: 355 RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDE 414

Query: 492 ANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIV 551
             +    M + G   N VT+ TL+HGF Q  +      +  +M      ++PD  T+SI+
Sbjct: 415 GMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSD--GVLPDIMTYSIL 472

Query: 552 VDLLAKDEK 560
           +D L  + K
Sbjct: 473 LDGLCNNGK 481



 Score =  132 bits (331), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 85/309 (27%), Positives = 147/309 (47%), Gaps = 2/309 (0%)

Query: 278 KINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYN 337
           K+++A  L   M++    P    ++ L+     + + D    +   M + G  H + +Y+
Sbjct: 61  KLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 120

Query: 338 ILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLY 397
           ILIN +C+   +  A+++  +++  G    ++T N+LL+G     +   A  L  +M   
Sbjct: 121 ILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEM 180

Query: 398 NVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNA 457
             +PD  T+N LI GL ++N   EAV L   + +   +  +  +  +++GLCK G +D A
Sbjct: 181 GYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLA 240

Query: 458 WELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHG 517
             L  K+ Q  + P VV Y+ +I  LC    +  A +    M+  G  PNVVT+N+L+  
Sbjct: 241 LSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 300

Query: 518 FLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKSSYRACLY 577
                + S    LL  M E  R + P+  TFS ++D   K+ K  E   +     +  + 
Sbjct: 301 LCNYGRWSDASRLLSDMIE--RKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID 358

Query: 578 VTIFQPSSL 586
             IF  SSL
Sbjct: 359 PDIFTYSSL 367


>gi|356529507|ref|XP_003533332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 546

 Score =  348 bits (894), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 191/510 (37%), Positives = 295/510 (57%), Gaps = 34/510 (6%)

Query: 53  IINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLT 112
           I N+++A   F  M  M+ +PPI  FN +  + AK +HY   +S   +L   G+ PD +T
Sbjct: 37  IQNVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKIKHYSTAVSLSHRLELKGIQPDLIT 96

Query: 113 LNILINCFGNKE----------------------------RGLCVENRIKEATWLFKNMI 144
           LNILINCF +                              +GLC++ ++ +A      ++
Sbjct: 97  LNILINCFCHMGQITFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLL 156

Query: 145 AFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLC 204
           A G++ D ++YGTLING C+ G+   A++L +K+      +G ++K N+  Y+ IID+LC
Sbjct: 157 AQGIKFDQVSYGTLINGVCKIGDTRGAIKLVRKI------DGRLTKPNVEMYNTIIDALC 210

Query: 205 KEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLL 264
           K  LV +A  LF EM  +GI+  VV  TTLI+GFC A   +E  GL  EM+     PN+ 
Sbjct: 211 KYQLVSEAYGLFSEMTAKGISADVVTYTTLIYGFCIASKLKEAIGLLNEMVLKTINPNVY 270

Query: 265 TFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSM 324
           T+N+++D LCK GK+ EA  +L +M++  + PD  TY++LMDGY LV  +  A+ +F +M
Sbjct: 271 TYNILVDALCKEGKVKEAKNVLAVMLKACVKPDVITYSTLMDGYFLVYELKKAQHVFNAM 330

Query: 325 HSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQA 384
              G    V SY ILING+CK   V+EA++L++++    +   ++TY++L+ GL ++G+ 
Sbjct: 331 SLMGVTPDVHSYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRI 390

Query: 385 GYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCL 444
            Y   L DEM+   +  ++ TYN LIDGLCKN  +  A+ LF+ ++          F  L
Sbjct: 391 SYVWDLIDEMRDRGIPANVITYNSLIDGLCKNGHLDRAIALFNKMKDQGIRPCSFTFTIL 450

Query: 445 IDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGC 504
           +DGLCK GRL +A E F  L  KG    V  Y++MI+G C++G LE+A   L  ME+NGC
Sbjct: 451 LDGLCKGGRLKDAQEAFQDLLTKGYHLDVYKYNVMINGHCKQGLLEEALTMLSKMEENGC 510

Query: 505 APNVVTFNTLMHGFLQNNKTSKVVELLHKM 534
            PN VTF+ +++   + ++  K  +LL +M
Sbjct: 511 VPNAVTFDIIINALFKKDENDKAEKLLRQM 540



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 118/394 (29%), Positives = 198/394 (50%), Gaps = 13/394 (3%)

Query: 77  SFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEA 136
           S+  L   V K       I   RK+      P+    N +I+        LC    + EA
Sbjct: 166 SYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIID-------ALCKYQLVSEA 218

Query: 137 TWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSY 196
             LF  M A G+  DV+TY TLI GFC    L  A+ L  +MV            N+++Y
Sbjct: 219 YGLFSEMTAKGISADVVTYTTLIYGFCIASKLKEAIGLLNEMVLKTIN------PNVYTY 272

Query: 197 SIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLD 256
           +I++D+LCKEG V +AK +   M    + P V+  +TL+ G+      ++   +F  M  
Sbjct: 273 NILVDALCKEGKVKEAKNVLAVMLKACVKPDVITYSTLMDGYFLVYELKKAQHVFNAMSL 332

Query: 257 LGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDT 316
           +G  P++ ++ ++I+  CK   ++EA  L + M Q+ + P   TY+SL+DG C  GRI  
Sbjct: 333 MGVTPDVHSYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISY 392

Query: 317 AREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLS 376
             ++   M  +G    V++YN LI+G CK  +++ A++L+ ++   G+R    T+  LL 
Sbjct: 393 VWDLIDEMRDRGIPANVITYNSLIDGLCKNGHLDRAIALFNKMKDQGIRPCSFTFTILLD 452

Query: 377 GLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEF 436
           GL + G+   AQ+ F ++       D+  YN++I+G CK   ++EA+ +   +E N    
Sbjct: 453 GLCKGGRLKDAQEAFQDLLTKGYHLDVYKYNVMINGHCKQGLLEEALTMLSKMEENGCVP 512

Query: 437 GIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLV 470
               F+ +I+ L K    D A +L  ++  +GL+
Sbjct: 513 NAVTFDIIINALFKKDENDKAEKLLRQMICRGLL 546



 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 70/259 (27%), Positives = 126/259 (48%), Gaps = 4/259 (1%)

Query: 330 KHT--VVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYA 387
           +HT  ++ +N +++ + KI +   A+SL  ++   G++  +IT N L++     GQ  + 
Sbjct: 54  RHTPPIIQFNKILDSFAKIKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFG 113

Query: 388 QKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDG 447
             +  ++     +P   T+  LI GLC    V +A+     L     +F    +  LI+G
Sbjct: 114 FSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQGIKFDQVSYGTLING 173

Query: 448 LCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPN 507
           +CK G    A +L  K+  +   P V  Y+ +I  LC+   + +A      M   G + +
Sbjct: 174 VCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGISAD 233

Query: 508 VVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAV 567
           VVT+ TL++GF   +K  + + LL++M     N  P+  T++I+VD L K+ K  E   V
Sbjct: 234 VVTYTTLIYGFCIASKLKEAIGLLNEMVLKTIN--PNVYTYNILVDALCKEGKVKEAKNV 291

Query: 568 SKSSYRACLYVTIFQPSSL 586
                +AC+   +   S+L
Sbjct: 292 LAVMLKACVKPDVITYSTL 310


>gi|22531122|gb|AAM97065.1| putative membrane-associated salt-inducible protein [Arabidopsis
           thaliana]
 gi|62320656|dbj|BAD95323.1| putative membrane-associated salt-inducible protein [Arabidopsis
           thaliana]
          Length = 596

 Score =  347 bits (891), Expect = 8e-93,   Method: Compositional matrix adjust.
 Identities = 186/507 (36%), Positives = 290/507 (57%), Gaps = 17/507 (3%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           C+   I+L  A    G M  +   P I + + L       +     ++   ++V +G  P
Sbjct: 93  CRRSQISL--ALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRP 150

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           D +T   LI+       GL + N+  EA  L   M+  G +P+++TYG ++NG C+ G+ 
Sbjct: 151 DTITFTTLIH-------GLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDT 203

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
            +AL L  KM +   E       ++  ++ IIDSLCK   VD A  LF EM+ +GI P V
Sbjct: 204 DLALNLLNKMEAAKIE------ADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNV 257

Query: 229 VVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLEL 288
           V  ++LI   C  G W + + L  +M++    PNL+TFN +ID   K GK  EA  L + 
Sbjct: 258 VTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDD 317

Query: 289 MIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILN 348
           MI+R ++PD FTYNSL++G+C+  R+D A+++F  M SK C   VV+YN LI G+CK   
Sbjct: 318 MIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKR 377

Query: 349 VEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNI 408
           VE+   L+R++   G+    +TY TL+ GLF  G    AQK+F +M    V PD+ TY+I
Sbjct: 378 VEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSI 437

Query: 409 LIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKG 468
           L+DGLC N  +++A+++F  ++ ++ +  I I+  +I+G+CKAG++D+ W+LF  L  KG
Sbjct: 438 LLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKG 497

Query: 469 LVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVV 528
           + P VVTY+ MI GLC K  L++A   L  M+++G  PN  T+NTL+   L++   +   
Sbjct: 498 VKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASA 557

Query: 529 ELLHKMAEPERNLVPDDTTFSIVVDLL 555
           EL+ +M       V D +T  +V ++L
Sbjct: 558 ELIREMRSCR--FVGDASTIGLVANML 582



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 124/451 (27%), Positives = 227/451 (50%), Gaps = 12/451 (2%)

Query: 132 RIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKT 191
           ++ +A  LF  M+     P ++ +  L++   +     V + L +KM   +  +GL    
Sbjct: 27  KLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGL---- 82

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
             ++Y+I+I+  C+   +  A  L  +M   G  P++V  ++L++G+C      +   L 
Sbjct: 83  --YTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALV 140

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
            +M+++G RP+ +TF  +I  L    K +EA  L++ M+QRG  P+  TY  +++G C  
Sbjct: 141 DQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKR 200

Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
           G  D A  +   M +   +  VV +N +I+  CK  +V++A++L++++ + G+R  V+TY
Sbjct: 201 GDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTY 260

Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
           ++L+S L   G+   A +L  +M    + P+L T+N LID   K     EA KL+  +  
Sbjct: 261 SSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIK 320

Query: 432 NKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEK 491
              +  I  +N L++G C   RLD A ++F  +  K   P VVTY+ +I G C+  ++E 
Sbjct: 321 RSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVED 380

Query: 492 ANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIV 551
             +    M   G   + VT+ TL+ G   +       ++  +M      + PD  T+SI+
Sbjct: 381 GTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSD--GVPPDIMTYSIL 438

Query: 552 VDLLAKDEKYHECSAV----SKSSYRACLYV 578
           +D L  + K  +   V     KS  +  +Y+
Sbjct: 439 LDGLCNNGKLEKALEVFDYMQKSEIKLDIYI 469



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 57/220 (25%), Positives = 112/220 (50%), Gaps = 3/220 (1%)

Query: 338 ILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLY 397
           IL NG    + +++A+ L+  ++ +    +++ +N LLS + +  +      L ++M+  
Sbjct: 18  ILRNGLHD-MKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRL 76

Query: 398 NVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNA 457
            +   L TYNILI+  C+ + +  A+ L   +    +E  I   + L++G C   R+ +A
Sbjct: 77  EIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDA 136

Query: 458 WELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHG 517
             L  ++ + G  P  +T++ +IHGL    K  +A   +  M + GC PN+VT+  +++G
Sbjct: 137 VALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNG 196

Query: 518 FLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAK 557
             +   T   + LL+KM   +  +  D   F+ ++D L K
Sbjct: 197 LCKRGDTDLALNLLNKMEAAK--IEADVVIFNTIIDSLCK 234


>gi|15221515|ref|NP_176447.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75213223|sp|Q9SXD8.1|PPR90_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62590
 gi|5454201|gb|AAD43616.1|AC005698_15 T3P18.15 [Arabidopsis thaliana]
 gi|332195860|gb|AEE33981.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 634

 Score =  347 bits (891), Expect = 9e-93,   Method: Compositional matrix adjust.
 Identities = 186/507 (36%), Positives = 290/507 (57%), Gaps = 17/507 (3%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           C+   I+L  A    G M  +   P I + + L       +     ++   ++V +G  P
Sbjct: 131 CRRSQISL--ALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRP 188

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           D +T   LI+       GL + N+  EA  L   M+  G +P+++TYG ++NG C+ G+ 
Sbjct: 189 DTITFTTLIH-------GLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDT 241

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
            +AL L  KM +   E       ++  ++ IIDSLCK   VD A  LF EM+ +GI P V
Sbjct: 242 DLALNLLNKMEAAKIE------ADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNV 295

Query: 229 VVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLEL 288
           V  ++LI   C  G W + + L  +M++    PNL+TFN +ID   K GK  EA  L + 
Sbjct: 296 VTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDD 355

Query: 289 MIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILN 348
           MI+R ++PD FTYNSL++G+C+  R+D A+++F  M SK C   VV+YN LI G+CK   
Sbjct: 356 MIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKR 415

Query: 349 VEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNI 408
           VE+   L+R++   G+    +TY TL+ GLF  G    AQK+F +M    V PD+ TY+I
Sbjct: 416 VEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSI 475

Query: 409 LIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKG 468
           L+DGLC N  +++A+++F  ++ ++ +  I I+  +I+G+CKAG++D+ W+LF  L  KG
Sbjct: 476 LLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKG 535

Query: 469 LVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVV 528
           + P VVTY+ MI GLC K  L++A   L  M+++G  PN  T+NTL+   L++   +   
Sbjct: 536 VKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASA 595

Query: 529 ELLHKMAEPERNLVPDDTTFSIVVDLL 555
           EL+ +M       V D +T  +V ++L
Sbjct: 596 ELIREMRSCR--FVGDASTIGLVANML 620



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 124/451 (27%), Positives = 227/451 (50%), Gaps = 12/451 (2%)

Query: 132 RIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKT 191
           ++ +A  LF  M+     P ++ +  L++   +     V + L +KM   +  +GL    
Sbjct: 65  KLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGL---- 120

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
             ++Y+I+I+  C+   +  A  L  +M   G  P++V  ++L++G+C      +   L 
Sbjct: 121 --YTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALV 178

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
            +M+++G RP+ +TF  +I  L    K +EA  L++ M+QRG  P+  TY  +++G C  
Sbjct: 179 DQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKR 238

Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
           G  D A  +   M +   +  VV +N +I+  CK  +V++A++L++++ + G+R  V+TY
Sbjct: 239 GDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTY 298

Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
           ++L+S L   G+   A +L  +M    + P+L T+N LID   K     EA KL+  +  
Sbjct: 299 SSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIK 358

Query: 432 NKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEK 491
              +  I  +N L++G C   RLD A ++F  +  K   P VVTY+ +I G C+  ++E 
Sbjct: 359 RSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVED 418

Query: 492 ANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIV 551
             +    M   G   + VT+ TL+ G   +       ++  +M      + PD  T+SI+
Sbjct: 419 GTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSD--GVPPDIMTYSIL 476

Query: 552 VDLLAKDEKYHECSAV----SKSSYRACLYV 578
           +D L  + K  +   V     KS  +  +Y+
Sbjct: 477 LDGLCNNGKLEKALEVFDYMQKSEIKLDIYI 507



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 57/220 (25%), Positives = 112/220 (50%), Gaps = 3/220 (1%)

Query: 338 ILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLY 397
           IL NG    + +++A+ L+  ++ +    +++ +N LLS + +  +      L ++M+  
Sbjct: 56  ILRNGLHD-MKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRL 114

Query: 398 NVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNA 457
            +   L TYNILI+  C+ + +  A+ L   +    +E  I   + L++G C   R+ +A
Sbjct: 115 EIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDA 174

Query: 458 WELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHG 517
             L  ++ + G  P  +T++ +IHGL    K  +A   +  M + GC PN+VT+  +++G
Sbjct: 175 VALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNG 234

Query: 518 FLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAK 557
             +   T   + LL+KM   +  +  D   F+ ++D L K
Sbjct: 235 LCKRGDTDLALNLLNKMEAAK--IEADVVIFNTIIDSLCK 272


>gi|356529503|ref|XP_003533330.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 546

 Score =  347 bits (890), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 191/510 (37%), Positives = 294/510 (57%), Gaps = 34/510 (6%)

Query: 53  IINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLT 112
           I N+++A   F  M  M+ +PPI  FN +  + AK +HY   +S   +L   G+ PD +T
Sbjct: 37  IQNVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLIT 96

Query: 113 LNILINCFGNKE----------------------------RGLCVENRIKEATWLFKNMI 144
           LNILINCF +                              +GLC++ ++K+A      ++
Sbjct: 97  LNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLL 156

Query: 145 AFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLC 204
           A G + + ++Y TLING C+ G+   A++L +K+      +G ++K N+  YS IID+LC
Sbjct: 157 AQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKI------DGRLTKPNVEMYSTIIDALC 210

Query: 205 KEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLL 264
           K  LV +A  LF EM  +GI+  VV  +TLI+GFC  G  +E  GL  EM+     PN+ 
Sbjct: 211 KYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVY 270

Query: 265 TFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSM 324
           T+N+++D LCK GK+ EA  +L +M++  + PD  TY++LMDGY LV  +  A+ +F +M
Sbjct: 271 TYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAM 330

Query: 325 HSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQA 384
              G    V +Y ILING+CK   V+EA++L++++    +   ++TY++L+ GL ++G+ 
Sbjct: 331 SLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRI 390

Query: 385 GYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCL 444
            Y   L DEM+      D+ TY+ LIDGLCKN  +  A+ LF+ ++  +    I  F  L
Sbjct: 391 PYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTIL 450

Query: 445 IDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGC 504
           +DGLCK GRL +A E+F  L  KG    V TY++MI+G C++G LE+A   L  ME NGC
Sbjct: 451 LDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGC 510

Query: 505 APNVVTFNTLMHGFLQNNKTSKVVELLHKM 534
            PN  TF T++    + ++  K  +LL +M
Sbjct: 511 IPNAFTFETIIIALFKKDENDKAEKLLRQM 540



 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 96/338 (28%), Positives = 166/338 (49%), Gaps = 15/338 (4%)

Query: 27  SPRQIAAVSSPETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVA 86
           S   +  +S+     +  ++  C  G   L EA      M     +P + ++N+L  A+ 
Sbjct: 223 SEMTVKGISADVVTYSTLIYGFCIEG--KLKEAIGLLNEMVLKTINPNVYTYNILVDALC 280

Query: 87  KNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAF 146
           K        S    ++   + PD +T + L++       G  +   +K+A  +F  M   
Sbjct: 281 KEGKVKEAKSVLAVMLKACVKPDVITYSTLMD-------GYFLVYEVKKAQHVFNAMSLM 333

Query: 147 GVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKE 206
           GV PDV TY  LINGFC+   +  AL L K+M   +   G+++      YS +ID LCK 
Sbjct: 334 GVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVT------YSSLIDGLCKS 387

Query: 207 GLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTF 266
           G +    +L  EM+ RG    V+  ++LI G C  G+ +    LF +M D   RPN+ TF
Sbjct: 388 GRIPYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTF 447

Query: 267 NVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHS 326
            +++D LCKGG++ +A  + + ++ +G + + +TYN +++G+C  G ++ A  +   M  
Sbjct: 448 TILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMED 507

Query: 327 KGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGV 364
            GC     ++  +I    K    ++A  L RQ+I+ G+
Sbjct: 508 NGCIPNAFTFETIIIALFKKDENDKAEKLLRQMIARGL 545



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 96/368 (26%), Positives = 183/368 (49%), Gaps = 2/368 (0%)

Query: 243 NWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYN 302
           N ++    F  ML +   P ++ FN ++D   K    + A  L   +  +G+ PD  T N
Sbjct: 39  NVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLN 98

Query: 303 SLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISN 362
            L++ +C +G+I     +   +  +G     V+ N LI G C    V++A+  + ++++ 
Sbjct: 99  ILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQ 158

Query: 363 GVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEA 422
           G +   ++Y TL++G+ + G    A KL  ++     +P++  Y+ +ID LCK   V EA
Sbjct: 159 GFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEA 218

Query: 423 VKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHG 482
             LF  + +      +  ++ LI G C  G+L  A  L +++  K + P V TY+I++  
Sbjct: 219 YGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDA 278

Query: 483 LCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLV 542
           LC++GK+++A   L  M K    P+V+T++TLM G+    +  K   + + M+     + 
Sbjct: 279 LCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMS--LMGVT 336

Query: 543 PDDTTFSIVVDLLAKDEKYHECSAVSKSSYRACLYVTIFQPSSLGSMIGCTVRLMPQPEM 602
           PD  T++I+++   K++   E   + K  ++  +   I   SSL   +  + R+    ++
Sbjct: 337 PDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDL 396

Query: 603 SDTLGDDG 610
            D + D G
Sbjct: 397 IDEMRDRG 404


>gi|357498921|ref|XP_003619749.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494764|gb|AES75967.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 680

 Score =  346 bits (888), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 189/555 (34%), Positives = 301/555 (54%), Gaps = 40/555 (7%)

Query: 14  ETVSKVKLSSLFKS--PRQIAAVSSPETQLNEFLHENCKSGIINLN----EARYFFGYMT 67
            + S + L S+F+   P++      PE     F+H    S   + N    +A   F  + 
Sbjct: 3   HSSSSMLLRSVFRVSVPKKFHPFQFPENTHFYFIHSFSTSTTFHNNNDVVDAVSLFNCLL 62

Query: 68  HMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCF------- 120
              P+PP   F  + G++ K++HY  V+S ++K+   G+ P+F+  NILINCF       
Sbjct: 63  RQNPTPPDMEFGQILGSLVKSKHYHTVLSLFQKMEYRGIKPNFVNFNILINCFCQLGLIP 122

Query: 121 ---------------------GNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLI 159
                                    +G C++ +I +A      ++A G   D ++YGTLI
Sbjct: 123 FAFSVLAKILKMGYEPDTITLNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLI 182

Query: 160 NGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEM 219
           NG C+ G    AL L +++      +G + + ++  YS IIDS+CK+  V+ A +L+ EM
Sbjct: 183 NGLCKVGETRAALELLRRV------DGKLVQLDVVMYSTIIDSMCKDKNVNDAFDLYSEM 236

Query: 220 KGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKI 279
             R I+  +V  + LI GFC  G  ++  GLF +M      P++ TFN+++D  CK G++
Sbjct: 237 VSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVDAFCKEGRV 296

Query: 280 NEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNIL 339
            EA   L +M+++G+ PD  TYNSLMDGYCLV  ++ A+ I  +M  +G   TV SYNI+
Sbjct: 297 KEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHRGVTATVRSYNIV 356

Query: 340 INGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNV 399
           ING+CKI  V++AM L++++    +   VITYN+L+ GL ++G+  YA +L D M     
Sbjct: 357 INGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGRISYALELIDLMHDRGQ 416

Query: 400 EPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWE 459
           +PD+ TY+ ++D LCKN+ V +A+ L   L+       +  +  LIDGLCK GRL++A  
Sbjct: 417 QPDIITYSSILDALCKNHLVDKAIALLIKLKDQGIRPNMYTYTILIDGLCKGGRLEDARN 476

Query: 460 LFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFL 519
           +F  L  KG   TV TY++MI G C  G  ++A   L  M+ N C P+ +T+  ++    
Sbjct: 477 IFEDLLVKGYNLTVNTYTVMIQGFCSHGLFDEALSLLSKMKDNSCIPDAITYEIIICSLF 536

Query: 520 QNNKTSKVVELLHKM 534
             ++  K  +LL +M
Sbjct: 537 DKDENDKAEKLLREM 551



 Score =  191 bits (486), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 134/481 (27%), Positives = 229/481 (47%), Gaps = 49/481 (10%)

Query: 55  NLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLN 114
           N+N+A   +  M   + S  I +++ L             I  + K+ S  + PD  T N
Sbjct: 225 NVNDAFDLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKMTSENINPDVYTFN 284

Query: 115 ILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRL 174
           IL++ F       C E R+KEA      M+  G++PD++TY +L++G+C    +++A   
Sbjct: 285 ILVDAF-------CKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVNMA--- 334

Query: 175 HKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTL 234
            K +++     G+ +   + SY+I+I+  CK  +VD+A +LF EM  + I P V+   +L
Sbjct: 335 -KSILNTMSHRGVTA--TVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSL 391

Query: 235 IHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGL 294
           I G C +G       L   M D G +P+++T++ ++D LCK   +++A  LL  +  +G+
Sbjct: 392 IDGLCKSGRISYALELIDLMHDRGQQPDIITYSSILDALCKNHLVDKAIALLIKLKDQGI 451

Query: 295 NPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMS 354
            P+ +TY  L+DG C  GR++ AR IF  +  KG   TV +Y ++I G+C     +EA+S
Sbjct: 452 RPNMYTYTILIDGLCKGGRLEDARNIFEDLLVKGYNLTVNTYTVMIQGFCSHGLFDEALS 511

Query: 355 LYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTY-------- 406
           L  ++  N      ITY  ++  LF   +   A+KL  EM    +      Y        
Sbjct: 512 LLSKMKDNSCIPDAITYEIIICSLFDKDENDKAEKLLREMITRGLLYSFLEYGSWSLSFM 571

Query: 407 ----NILIDGLCKNNCVQEAVKLFHML-----------EMNKFEFGIEIFNCLIDGLCKA 451
               + L +   +    QE+     +L           + N  +  +E  + +I   C  
Sbjct: 572 AAPAHFLNNDSLQCTSSQESGNWAKLLLERIYCDCVLTKSNMRDKDVECPSVIIYSTCD- 630

Query: 452 GRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTF 511
                 W       ++G +  V TY++MI G C  G  +++   L  ME NGC P+ VT+
Sbjct: 631 ------WS------KQGYILDVNTYTVMIQGFCSHGLFDESLALLSKMEVNGCIPDAVTY 678

Query: 512 N 512
           +
Sbjct: 679 D 679


>gi|291622148|emb|CBJ23784.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
          Length = 630

 Score =  345 bits (885), Expect = 5e-92,   Method: Compositional matrix adjust.
 Identities = 207/617 (33%), Positives = 315/617 (51%), Gaps = 74/617 (11%)

Query: 2   ASRTQFRCLFSSETVSKVKLSSLFKSPRQIAAVSSPETQLNEFLHENCKSGIINLNEARY 61
           A R   R L     V+ V  S  F   R  +  +S + +  E L  N  S +  L++A  
Sbjct: 11  AKRFVHRSLVVRGNVATVSPSFSFFWRRAFSGKTSYDYR--EKLSRNGLSEL-KLDDAVA 67

Query: 62  FFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFG 121
            FG M   +P P I  F+ L  A+AK   +D VIS   ++ ++G+  +  T +ILINCF 
Sbjct: 68  LFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGMPHNHYTYSILINCFC 127

Query: 122 NKER----------------------------GLCVENRI-------------------- 133
            + +                            G C   RI                    
Sbjct: 128 RRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTV 187

Query: 134 ---------------KEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKM 178
                           EA  L   M+A G +PD++TYG ++NG C+ G+  +A  L  KM
Sbjct: 188 TFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFILLNKM 247

Query: 179 VSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGF 238
             G  E G      +  Y+ IID LCK   +D A  LF EM+ +GI P VV  ++LI   
Sbjct: 248 EQGKLEPG------VLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCL 301

Query: 239 CCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDR 298
           C  G W + + L  +M++    P++ TF+ +ID   K GK+ EA  L + M++R ++P  
Sbjct: 302 CNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSI 361

Query: 299 FTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQ 358
            TY+SL++G+C+  R+D A+++F  M SK C   VVSY+ LI G+CK   V+E M L+R+
Sbjct: 362 VTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFRE 421

Query: 359 IISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNC 418
           +   G+    +TY TL+ GLFQAG    AQ++F EM    V P++ TYN L+DGLCKN  
Sbjct: 422 MSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGK 481

Query: 419 VQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSI 478
           +++A+ +F  L+ +K E  I  +N +I+G+CKAG++++ W+LF  L  KG+ P VV Y+ 
Sbjct: 482 LEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNT 541

Query: 479 MIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPE 538
           MI G CRKG  E+A+     M+++G  PN   +NTL+   L++       EL+ +M    
Sbjct: 542 MISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSC- 600

Query: 539 RNLVPDDTTFSIVVDLL 555
                D +T  +V ++L
Sbjct: 601 -GFAGDASTIGLVTNML 616



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 124/452 (27%), Positives = 226/452 (50%), Gaps = 8/452 (1%)

Query: 130 ENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLIS 189
           E ++ +A  LF  M+     P +I +  L++   +     V + L ++M        L  
Sbjct: 59  ELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQM------QNLGM 112

Query: 190 KTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNG 249
             N ++YSI+I+  C+   +  A  +  +M   G  P +V  ++L++G+C +    E   
Sbjct: 113 PHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVA 172

Query: 250 LFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYC 309
           L  +M   G +PN +TFN +I  L    K +EA  L++ M+ +G  PD  TY  +++G C
Sbjct: 173 LVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLC 232

Query: 310 LVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVI 369
             G  D A  +   M     +  V+ Y  +I+G CK  ++++A++L++++ + G+R  V+
Sbjct: 233 KRGDTDLAFILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVV 292

Query: 370 TYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHML 429
           TY++L+S L   G+   A +L  +M    + PD+ T++ LID   K   + EA KL+  +
Sbjct: 293 TYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEM 352

Query: 430 EMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKL 489
                +  I  ++ LI+G C   RLD A ++F  +  K   P VV+YS +I G C+  ++
Sbjct: 353 VKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRV 412

Query: 490 EKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFS 549
           ++  +    M + G   N VT+ TL+ G  Q        E+  +M      + P+  T++
Sbjct: 413 DEGMELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSD--GVPPNIMTYN 470

Query: 550 IVVDLLAKDEKYHECSAVSKSSYRACLYVTIF 581
            ++D L K+ K  +   V +   R+ +  TI+
Sbjct: 471 TLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIY 502



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 85/309 (27%), Positives = 151/309 (48%), Gaps = 2/309 (0%)

Query: 278 KINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYN 337
           K+++A  L   M++    P    ++ L+     + + D    +   M + G  H   +Y+
Sbjct: 61  KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGMPHNHYTYS 120

Query: 338 ILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLY 397
           ILIN +C+   +  A+++  +++  G    ++T ++LL+G   + +   A  L D+M + 
Sbjct: 121 ILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVT 180

Query: 398 NVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNA 457
             +P+  T+N LI GL  +N   EAV L   +     +  +  +  +++GLCK G  D A
Sbjct: 181 GYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLA 240

Query: 458 WELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHG 517
           + L +K+ Q  L P V+ Y+ +I GLC+   ++ A +    ME  G  PNVVT+++L+  
Sbjct: 241 FILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISC 300

Query: 518 FLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKSSYRACLY 577
                + S    LL  M E  R + PD  TFS ++D   K+ K  E   +     +  + 
Sbjct: 301 LCNYGRWSDASRLLSDMIE--RKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSID 358

Query: 578 VTIFQPSSL 586
            +I   SSL
Sbjct: 359 PSIVTYSSL 367



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 62/250 (24%), Positives = 106/250 (42%), Gaps = 36/250 (14%)

Query: 56  LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNI 115
           L+EA+  F +M      P + S++ L     K +  D  +  +R++   GL+ + +T   
Sbjct: 377 LDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTT 436

Query: 116 LINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRL- 174
           LI       +GL        A  +FK M++ GV P+++TY TL++G C+ G L  A+ + 
Sbjct: 437 LI-------QGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVF 489

Query: 175 --------------HKKMVSGDYENGLIS--------------KTNIFSYSIIIDSLCKE 206
                         +  M+ G  + G +               K ++ +Y+ +I   C++
Sbjct: 490 EYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRK 549

Query: 207 GLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTF 266
           G  ++A  LF EMK  G  P      TLI      G+ E    L  EM   G   +  T 
Sbjct: 550 GSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTI 609

Query: 267 NVMIDCLCKG 276
            ++ + L  G
Sbjct: 610 GLVTNMLHDG 619


>gi|15221549|ref|NP_176454.1| RNA processing factor 2 [Arabidopsis thaliana]
 gi|193806496|sp|Q9SXD1.2|PPR91_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62670, mitochondrial; Flags: Precursor
 gi|332195871|gb|AEE33992.1| RNA processing factor 2 [Arabidopsis thaliana]
          Length = 630

 Score =  344 bits (883), Expect = 7e-92,   Method: Compositional matrix adjust.
 Identities = 193/565 (34%), Positives = 296/565 (52%), Gaps = 71/565 (12%)

Query: 54  INLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTL 113
           + L++A   FG M   +P P I  F+ L  A+AK   +D VIS   ++ ++G+  +  T 
Sbjct: 60  LKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTY 119

Query: 114 NILINCFGNKER----------------------------GLCVENRIKEAT-------- 137
           +ILINCF  + +                            G C   RI EA         
Sbjct: 120 SILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFV 179

Query: 138 ---------------------------WLFKNMIAFGVRPDVITYGTLINGFCRTGNLSV 170
                                       L   M+A G +PD++TYG ++NG C+ G+  +
Sbjct: 180 TGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDL 239

Query: 171 ALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVV 230
           A  L  KM  G  E G      +  Y+ IID LCK   +D A  LF EM+ +GI P VV 
Sbjct: 240 AFNLLNKMEQGKLEPG------VLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVT 293

Query: 231 CTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMI 290
            ++LI   C  G W + + L  +M++    P++ TF+ +ID   K GK+ EA  L + M+
Sbjct: 294 YSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMV 353

Query: 291 QRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVE 350
           +R ++P   TY+SL++G+C+  R+D A+++F  M SK C   VV+YN LI G+CK   VE
Sbjct: 354 KRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVE 413

Query: 351 EAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILI 410
           E M ++R++   G+    +TYN L+ GLFQAG    AQ++F EM    V P++ TYN L+
Sbjct: 414 EGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLL 473

Query: 411 DGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLV 470
           DGLCKN  +++A+ +F  L+ +K E  I  +N +I+G+CKAG++++ W+LF  L  KG+ 
Sbjct: 474 DGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVK 533

Query: 471 PTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVEL 530
           P VV Y+ MI G CRKG  E+A+     M+++G  PN   +NTL+   L++       EL
Sbjct: 534 PDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAEL 593

Query: 531 LHKMAEPERNLVPDDTTFSIVVDLL 555
           + +M         D +T  +V ++L
Sbjct: 594 IKEMRSC--GFAGDASTIGLVTNML 616



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 126/452 (27%), Positives = 227/452 (50%), Gaps = 8/452 (1%)

Query: 130 ENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLIS 189
           E ++ +A  LF  M+     P +I +  L++   +     V + L ++M        L  
Sbjct: 59  ELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQM------QNLGI 112

Query: 190 KTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNG 249
             N ++YSI+I+  C+   +  A  +  +M   G  P +V  ++L++G+C +    E   
Sbjct: 113 PHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVA 172

Query: 250 LFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYC 309
           L  +M   G +PN +TFN +I  L    K +EA  L++ M+ +G  PD  TY  +++G C
Sbjct: 173 LVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLC 232

Query: 310 LVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVI 369
             G  D A  +   M     +  V+ YN +I+G CK  ++++A++L++++ + G+R  V+
Sbjct: 233 KRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVV 292

Query: 370 TYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHML 429
           TY++L+S L   G+   A +L  +M    + PD+ T++ LID   K   + EA KL+  +
Sbjct: 293 TYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEM 352

Query: 430 EMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKL 489
                +  I  ++ LI+G C   RLD A ++F  +  K   P VVTY+ +I G C+  ++
Sbjct: 353 VKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRV 412

Query: 490 EKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFS 549
           E+  +    M + G   N VT+N L+ G  Q        E+  +M      + P+  T++
Sbjct: 413 EEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSD--GVPPNIMTYN 470

Query: 550 IVVDLLAKDEKYHECSAVSKSSYRACLYVTIF 581
            ++D L K+ K  +   V +   R+ +  TI+
Sbjct: 471 TLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIY 502



 Score =  142 bits (357), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 95/342 (27%), Positives = 158/342 (46%), Gaps = 37/342 (10%)

Query: 245 EEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSL 304
           ++   LF EM+   P P+++ F+ ++  + K  K +    L E M   G+  + +TY+ L
Sbjct: 63  DDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSIL 122

Query: 305 MDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGV 364
           ++ +C   ++  A  +   M   G +  +V+ + L+NGYC    + EA++L  Q+   G 
Sbjct: 123 INCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGY 182

Query: 365 RQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVK 424
           +   +T+NTL+ GLF   +A  A  L D M     +PDL TY ++++G            
Sbjct: 183 QPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNG------------ 230

Query: 425 LFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLC 484
                                  LCK G  D A+ L +K+ Q  L P V+ Y+ +I GLC
Sbjct: 231 -----------------------LCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLC 267

Query: 485 RKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPD 544
           +   ++ A +    ME  G  PNVVT+++L+       + S    LL  M E  R + PD
Sbjct: 268 KYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIE--RKINPD 325

Query: 545 DTTFSIVVDLLAKDEKYHECSAVSKSSYRACLYVTIFQPSSL 586
             TFS ++D   K+ K  E   +     +  +  +I   SSL
Sbjct: 326 VFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSL 367



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 63/250 (25%), Positives = 108/250 (43%), Gaps = 36/250 (14%)

Query: 56  LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNI 115
           L+EA+  F +M      P + ++N L     K +  +  +  +R++   GL+ + +T NI
Sbjct: 377 LDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNI 436

Query: 116 LINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRL- 174
           LI       +GL        A  +FK M++ GV P+++TY TL++G C+ G L  A+ + 
Sbjct: 437 LI-------QGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVF 489

Query: 175 --------------HKKMVSGDYENGLIS--------------KTNIFSYSIIIDSLCKE 206
                         +  M+ G  + G +               K ++ +Y+ +I   C++
Sbjct: 490 EYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRK 549

Query: 207 GLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTF 266
           G  ++A  LF EMK  G  P      TLI      G+ E    L  EM   G   +  T 
Sbjct: 550 GSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTI 609

Query: 267 NVMIDCLCKG 276
            ++ + L  G
Sbjct: 610 GLVTNMLHDG 619


>gi|356529465|ref|XP_003533312.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 546

 Score =  344 bits (883), Expect = 8e-92,   Method: Compositional matrix adjust.
 Identities = 187/511 (36%), Positives = 292/511 (57%), Gaps = 34/511 (6%)

Query: 52  GIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFL 111
            I N+++A   F  M  M+ +PPI  FN +  + AK +HY   +S   +L   G+ PD +
Sbjct: 36  SIQNVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLI 95

Query: 112 TLNILINCFGNKE----------------------------RGLCVENRIKEATWLFKNM 143
           TLNILINCF +                              +GLC++ ++K+A      +
Sbjct: 96  TLNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKL 155

Query: 144 IAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSL 203
           +A G + + ++Y TLING C+ G+   A++  +K+      +G ++K ++  Y+ IID++
Sbjct: 156 LAQGFQLNQVSYATLINGVCKIGDTRAAIKFLRKI------DGRLTKPDVVMYNTIIDAM 209

Query: 204 CKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNL 263
           CK  LV +A  LF EM  +GI+  VV   TLI+GFC  G  +E  GL  EM+     PN+
Sbjct: 210 CKYQLVSEAYGLFSEMAVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLKTINPNV 269

Query: 264 LTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLS 323
            T+N+++D LCK GK+ EA  +L +M++  + PD  TY++LMDGY LV  +  A+ +F +
Sbjct: 270 YTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNA 329

Query: 324 MHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQ 383
           M   G    V +Y ILING+CK   V+EA++L++++    +   ++TY++L+ GL ++G+
Sbjct: 330 MSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGR 389

Query: 384 AGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNC 443
             Y   L DEM+      D+ TY+ LIDGLCKN  +  A+ LF+ ++  +    I  F  
Sbjct: 390 ISYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTI 449

Query: 444 LIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNG 503
           L+DGLCK GRL +A E+F  L  KG    V TY++MI+G C++G LE+A   L  ME NG
Sbjct: 450 LLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNG 509

Query: 504 CAPNVVTFNTLMHGFLQNNKTSKVVELLHKM 534
           C PN  TF T++    + ++  K  +LL +M
Sbjct: 510 CIPNAFTFETIIIALFKKDENDKAEKLLRQM 540



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 97/338 (28%), Positives = 166/338 (49%), Gaps = 15/338 (4%)

Query: 27  SPRQIAAVSSPETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVA 86
           S   +  +S+     N  ++  C  G   L EA      M     +P + ++N+L  A+ 
Sbjct: 223 SEMAVKGISADVVTYNTLIYGFCIVG--KLKEAIGLLNEMVLKTINPNVYTYNILVDALC 280

Query: 87  KNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAF 146
           K        S    ++   + PD +T + L++       G  +   +K+A  +F  M   
Sbjct: 281 KEGKVKEAKSVLAVMLKACVKPDVITYSTLMD-------GYFLVYEVKKAQHVFNAMSLM 333

Query: 147 GVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKE 206
           GV PDV TY  LINGFC+   +  AL L K+M   +   G+++      YS +ID LCK 
Sbjct: 334 GVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVT------YSSLIDGLCKS 387

Query: 207 GLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTF 266
           G +    +L  EM+ RG    V+  ++LI G C  G+ +    LF +M D   RPN+ TF
Sbjct: 388 GRISYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTF 447

Query: 267 NVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHS 326
            +++D LCKGG++ +A  + + ++ +G + + +TYN +++G+C  G ++ A  +   M  
Sbjct: 448 TILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMED 507

Query: 327 KGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGV 364
            GC     ++  +I    K    ++A  L RQ+I+ G+
Sbjct: 508 NGCIPNAFTFETIIIALFKKDENDKAEKLLRQMIARGL 545



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 97/368 (26%), Positives = 182/368 (49%), Gaps = 2/368 (0%)

Query: 243 NWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYN 302
           N ++    F  ML +   P ++ FN ++D   K    + A  L   +  +G+ PD  T N
Sbjct: 39  NVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLN 98

Query: 303 SLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISN 362
            L++ +C +G+I     +   +  +G     V+ N LI G C    V++A+  + ++++ 
Sbjct: 99  ILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQ 158

Query: 363 GVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEA 422
           G +   ++Y TL++G+ + G    A K   ++     +PD+  YN +ID +CK   V EA
Sbjct: 159 GFQLNQVSYATLINGVCKIGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSEA 218

Query: 423 VKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHG 482
             LF  + +      +  +N LI G C  G+L  A  L +++  K + P V TY+I++  
Sbjct: 219 YGLFSEMAVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLKTINPNVYTYNILVDA 278

Query: 483 LCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLV 542
           LC++GK+++A   L  M K    P+V+T++TLM G+    +  K   + + M+     + 
Sbjct: 279 LCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMS--LMGVT 336

Query: 543 PDDTTFSIVVDLLAKDEKYHECSAVSKSSYRACLYVTIFQPSSLGSMIGCTVRLMPQPEM 602
           PD  T++I+++   K++   E   + K  ++  +   I   SSL   +  + R+    ++
Sbjct: 337 PDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDL 396

Query: 603 SDTLGDDG 610
            D + D G
Sbjct: 397 IDEMRDRG 404


>gi|356561387|ref|XP_003548963.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 520

 Score =  343 bits (881), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 190/516 (36%), Positives = 283/516 (54%), Gaps = 38/516 (7%)

Query: 66  MTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCF----- 120
           M  ++  PPI  F  + G++ K +HY  VIS  +++ + G++PD +TL+ILINCF     
Sbjct: 1   MLLLRHIPPIIEFGKILGSLVKMKHYPTVISLSKQMEAKGIVPDLVTLSILINCFCHLGQ 60

Query: 121 -----------------------GNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGT 157
                                      +GLC++  +K++      ++A G + D ++YG 
Sbjct: 61  MAFSFSVLGKILKLGYQPNTIILNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYGI 120

Query: 158 LINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFL 217
           L+NG C+ G    A++L + +          ++ ++  YS IID LCK+ LVD+A +L+ 
Sbjct: 121 LLNGLCKIGETRCAIKLLRTIEDRS------TRPDVVMYSTIIDGLCKDKLVDEAYDLYS 174

Query: 218 EMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGG 277
           EM  RGI P V+  TTLI GFC AG   E  GL  EM+     PN+ T+N +ID LCK G
Sbjct: 175 EMNARGIFPDVITYTTLICGFCLAGQLMEAFGLLNEMILKNINPNIYTYNTLIDTLCKEG 234

Query: 278 KINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYN 337
           K+ E+  LL +M ++G+ PD   Y+ LMDGYCLVG +  A++IFL M   G    V SYN
Sbjct: 235 KVKESKNLLAVMTKKGVKPDVVIYSILMDGYCLVGEVQKAKQIFLVMVQTGVNPDVYSYN 294

Query: 338 ILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLY 397
           I+ING CK   V+EAM+L R+++   +    +TY++L+ GL + G+      L  EM   
Sbjct: 295 IIINGLCKGKRVDEAMNLLREMLHKNMIPDTVTYSSLIDGLCKLGRITTILDLTKEMHHR 354

Query: 398 NVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNA 457
               +L TYN L+DGLCKN  + +A+ LF  ++    +     +  LIDGLCK GRL   
Sbjct: 355 GQPANLVTYNSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGGRLKKG 414

Query: 458 WELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHG 517
             LF  L  KG    V TY++MI GLC++G  ++A      ME NGC PN VTF  ++  
Sbjct: 415 QALFQHLLVKGYCIDVWTYTVMISGLCKEGMFDEALAMKSKMEDNGCIPNAVTFEIIIRS 474

Query: 518 FLQNNKTSKVVELLHKMAE----PERNLVPDDTTFS 549
            L+ ++  K  +LLH+M      P RN   + ++ +
Sbjct: 475 LLEKDENDKAEKLLHEMIAKGLLPFRNFHSERSSVT 510



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 113/418 (27%), Positives = 214/418 (51%), Gaps = 8/418 (1%)

Query: 150 PDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLV 209
           P +I +G ++    +  +    + L K+M +     G++   ++ + SI+I+  C  G +
Sbjct: 8   PPIIEFGKILGSLVKMKHYPTVISLSKQMEA----KGIVP--DLVTLSILINCFCHLGQM 61

Query: 210 DKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVM 269
             +  +  ++   G  P  ++  TL+ G C  G  ++      +++  G + + +++ ++
Sbjct: 62  AFSFSVLGKILKLGYQPNTIILNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYGIL 121

Query: 270 IDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGC 329
           ++ LCK G+   A  LL  +  R   PD   Y++++DG C    +D A +++  M+++G 
Sbjct: 122 LNGLCKIGETRCAIKLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGI 181

Query: 330 KHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQK 389
              V++Y  LI G+C    + EA  L  ++I   +   + TYNTL+  L + G+   ++ 
Sbjct: 182 FPDVITYTTLICGFCLAGQLMEAFGLLNEMILKNINPNIYTYNTLIDTLCKEGKVKESKN 241

Query: 390 LFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLC 449
           L   M    V+PD+  Y+IL+DG C    VQ+A ++F ++        +  +N +I+GLC
Sbjct: 242 LLAVMTKKGVKPDVVIYSILMDGYCLVGEVQKAKQIFLVMVQTGVNPDVYSYNIIINGLC 301

Query: 450 KAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVV 509
           K  R+D A  L  ++  K ++P  VTYS +I GLC+ G++    D    M   G   N+V
Sbjct: 302 KGKRVDEAMNLLREMLHKNMIPDTVTYSSLIDGLCKLGRITTILDLTKEMHHRGQPANLV 361

Query: 510 TFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAV 567
           T+N+L+ G  +N    K + L  KM   ER + P+  T++ ++D L K  +  +  A+
Sbjct: 362 TYNSLLDGLCKNQNLDKAIALFMKMK--ERGIQPNKYTYTALIDGLCKGGRLKKGQAL 417



 Score =  135 bits (341), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 91/341 (26%), Positives = 164/341 (48%), Gaps = 41/341 (12%)

Query: 254 MLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGR 313
           ML L   P ++ F  ++  L K         L + M  +G+ PD  T + L++ +C +G+
Sbjct: 1   MLLLRHIPPIIEFGKILGSLVKMKHYPTVISLSKQMEAKGIVPDLVTLSILINCFCHLGQ 60

Query: 314 IDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNT 373
           +  +  +   +   G +   +  N L+ G C    V++++  + ++++ G +   ++Y  
Sbjct: 61  MAFSFSVLGKILKLGYQPNTIILNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYGI 120

Query: 374 LLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNK 433
           LL+GL + G+   A KL   ++  +  PD+  Y+ +IDGLCK+  V EA  L+   EMN 
Sbjct: 121 LLNGLCKIGETRCAIKLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVDEAYDLYS--EMNA 178

Query: 434 F------------------------EFG-------------IEIFNCLIDGLCKAGRLDN 456
                                     FG             I  +N LID LCK G++  
Sbjct: 179 RGIFPDVITYTTLICGFCLAGQLMEAFGLLNEMILKNINPNIYTYNTLIDTLCKEGKVKE 238

Query: 457 AWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMH 516
           +  L   + +KG+ P VV YSI++ G C  G+++KA    L M + G  P+V ++N +++
Sbjct: 239 SKNLLAVMTKKGVKPDVVIYSILMDGYCLVGEVQKAKQIFLVMVQTGVNPDVYSYNIIIN 298

Query: 517 GFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAK 557
           G  +  +  + + LL +M    +N++PD  T+S ++D L K
Sbjct: 299 GLCKGKRVDEAMNLLREML--HKNMIPDTVTYSSLIDGLCK 337



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 85/287 (29%), Positives = 133/287 (46%), Gaps = 15/287 (5%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
           N  +   CK G   + E++     MT     P +  +++L                +  +
Sbjct: 224 NTLIDTLCKEG--KVKESKNLLAVMTKKGVKPDVVIYSILMDGYCLVGEVQKAKQIFLVM 281

Query: 102 VSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLING 161
           V  G+ PD  + NI+IN       GLC   R+ EA  L + M+   + PD +TY +LI+G
Sbjct: 282 VQTGVNPDVYSYNIIIN-------GLCKGKRVDEAMNLLREMLHKNMIPDTVTYSSLIDG 334

Query: 162 FCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKG 221
            C+ G ++  L L K+M    +  G     N+ +Y+ ++D LCK   +DKA  LF++MK 
Sbjct: 335 LCKLGRITTILDLTKEM----HHRG--QPANLVTYNSLLDGLCKNQNLDKAIALFMKMKE 388

Query: 222 RGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINE 281
           RGI P     T LI G C  G  ++   LF  +L  G   ++ T+ VMI  LCK G  +E
Sbjct: 389 RGIQPNKYTYTALIDGLCKGGRLKKGQALFQHLLVKGYCIDVWTYTVMISGLCKEGMFDE 448

Query: 282 ANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKG 328
           A  +   M   G  P+  T+  ++         D A ++   M +KG
Sbjct: 449 ALAMKSKMEDNGCIPNAVTFEIIIRSLLEKDENDKAEKLLHEMIAKG 495



 Score =  112 bits (279), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 73/243 (30%), Positives = 124/243 (51%), Gaps = 13/243 (5%)

Query: 56  LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNI 115
           + +A+  F  M     +P + S+N++   + K +  D  ++  R+++   ++PD +T + 
Sbjct: 271 VQKAKQIFLVMVQTGVNPDVYSYNIIINGLCKGKRVDEAMNLLREMLHKNMIPDTVTYSS 330

Query: 116 LINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLH 175
           LI+       GLC   RI     L K M   G   +++TY +L++G C+  NL  A+ L 
Sbjct: 331 LID-------GLCKLGRITTILDLTKEMHHRGQPANLVTYNSLLDGLCKNQNLDKAIALF 383

Query: 176 KKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLI 235
            KM     E G+  + N ++Y+ +ID LCK G + K + LF  +  +G    V   T +I
Sbjct: 384 MKM----KERGI--QPNKYTYTALIDGLCKGGRLKKGQALFQHLLVKGYCIDVWTYTVMI 437

Query: 236 HGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLN 295
            G C  G ++E   +  +M D G  PN +TF ++I  L +  + ++A  LL  MI +GL 
Sbjct: 438 SGLCKEGMFDEALAMKSKMEDNGCIPNAVTFEIIIRSLLEKDENDKAEKLLHEMIAKGLL 497

Query: 296 PDR 298
           P R
Sbjct: 498 PFR 500


>gi|357502217|ref|XP_003621397.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355496412|gb|AES77615.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 550

 Score =  343 bits (879), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 191/515 (37%), Positives = 286/515 (55%), Gaps = 36/515 (6%)

Query: 50  KSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAK--NRHYDAVISFYRKLVSIGLL 107
           KS   ++N     F  M  M+P+P I  FN + G++ K  N HY   IS   +L   G+ 
Sbjct: 32  KSNDFDVNNDVSSFHRMLRMRPTPSIVEFNKILGSIVKANNNHYTTAISLSHQLELKGIT 91

Query: 108 PDFLTLNILINC----------------------------FGNKERGLCVENRIKEATWL 139
           P  +T NIL+NC                            F     G+C+  ++KEA   
Sbjct: 92  PTIVTFNILVNCYCHLGEMTFAFSIFAKILKLGYHPTTITFNTLINGICLNGKLKEALHF 151

Query: 140 FKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSII 199
             ++IA G   D ++Y TLING C+ G    AL++ KK+       G +  T++  Y+II
Sbjct: 152 HDHVIALGFHLDQVSYRTLINGLCKIGETRAALQMLKKI------EGKLVNTDVVMYNII 205

Query: 200 IDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGP 259
           I+SLCK+  V  A +L+ EM  + I+P VV   +LI GFC  G  +E  GLF EM+    
Sbjct: 206 INSLCKDKAVSDAYQLYSEMITKRISPDVVTFNSLILGFCVVGQLKEAFGLFHEMVLKNI 265

Query: 260 RPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTARE 319
            P++ TF++++D LCK G I  A  +L +M+++G+ PD  TY+SLMDGYCLV  ++ A+ 
Sbjct: 266 NPDVYTFSILVDALCKDGNITRAKNMLAVMMKQGVIPDVVTYSSLMDGYCLVNEVNKAKH 325

Query: 320 IFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLF 379
           +F +M   G      SYNI+ING  KI  V+EA+SL++++   G+    +TYN+L+ GL 
Sbjct: 326 VFSTMSRLGVAPHAHSYNIMINGLGKIKMVDEALSLFKEMCCKGIAPDTVTYNSLIDGLC 385

Query: 380 QAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIE 439
           + G+  YA +L DEM    +  D+ TYN LID LCKN+ + +A+ L   ++    +  + 
Sbjct: 386 KLGRISYAWQLVDEMHNNGIPADILTYNSLIDVLCKNHHIDKAIALVKKIKDQGIQPSMY 445

Query: 440 IFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYM 499
            +N LIDGLCK GRL NA ++F  L  KG      TY+IMI+GLC++G   +A   L  M
Sbjct: 446 TYNILIDGLCKGGRLKNAQDVFQDLLIKGYSVNAWTYNIMINGLCKEGLFNEAEVLLSKM 505

Query: 500 EKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKM 534
           E NG  P+ VT+ T++    + ++  K  +LL +M
Sbjct: 506 ENNGIIPDAVTYETIIRALFRKDENEKAEKLLREM 540



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 136/464 (29%), Positives = 228/464 (49%), Gaps = 51/464 (10%)

Query: 37  PET-QLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVI 95
           P T   N  ++  C +G   L EA +F  ++  +       S+  L   + K     A +
Sbjct: 127 PTTITFNTLINGICLNG--KLKEALHFHDHVIALGFHLDQVSYRTLINGLCKIGETRAAL 184

Query: 96  SFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITY 155
              +K+    +  D +  NI+IN        LC +  + +A  L+  MI   + PDV+T+
Sbjct: 185 QMLKKIEGKLVNTDVVMYNIIIN-------SLCKDKAVSDAYQLYSEMITKRISPDVVTF 237

Query: 156 GTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKEL 215
            +LI GFC  G L  A  L  +MV  +         +++++SI++D+LCK+G + +AK +
Sbjct: 238 NSLILGFCVVGQLKEAFGLFHEMVLKNIN------PDVYTFSILVDALCKDGNITRAKNM 291

Query: 216 FLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCK 275
              M  +G+ P VV  ++L+ G+C      +   +F  M  LG  P+  ++N+MI+ L K
Sbjct: 292 LAVMMKQGVIPDVVTYSSLMDGYCLVNEVNKAKHVFSTMSRLGVAPHAHSYNIMINGLGK 351

Query: 276 GGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVS 335
              ++EA  L + M  +G+ PD  TYNSL+DG C +GRI  A ++   MH+ G    +++
Sbjct: 352 IKMVDEALSLFKEMCCKGIAPDTVTYNSLIDGLCKLGRISYAWQLVDEMHNNGIPADILT 411

Query: 336 YNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMK 395
           YN LI+  CK  ++++A++L ++I   G++ ++ TYN L+ GL + G+   AQ +F ++ 
Sbjct: 412 YNSLIDVLCKNHHIDKAIALVKKIKDQGIQPSMYTYNILIDGLCKGGRLKNAQDVFQDLL 471

Query: 396 LYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLD 455
           +     +  TYNI+I+GLCK                                    G  +
Sbjct: 472 IKGYSVNAWTYNIMINGLCKE-----------------------------------GLFN 496

Query: 456 NAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYM 499
            A  L  K+   G++P  VTY  +I  L RK + EKA   L  M
Sbjct: 497 EAEVLLSKMENNGIIPDAVTYETIIRALFRKDENEKAEKLLREM 540



 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 107/359 (29%), Positives = 190/359 (52%), Gaps = 4/359 (1%)

Query: 212 AKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMID 271
           A  L  +++ +GI P +V    L++ +C  G       +F ++L LG  P  +TFN +I+
Sbjct: 78  AISLSHQLELKGITPTIVTFNILVNCYCHLGEMTFAFSIFAKILKLGYHPTTITFNTLIN 137

Query: 272 CLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKH 331
            +C  GK+ EA    + +I  G + D+ +Y +L++G C +G    A ++   +  K    
Sbjct: 138 GICLNGKLKEALHFHDHVIALGFHLDQVSYRTLINGLCKIGETRAALQMLKKIEGKLVNT 197

Query: 332 TVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLF 391
            VV YNI+IN  CK   V +A  LY ++I+  +   V+T+N+L+ G    GQ   A  LF
Sbjct: 198 DVVMYNIIINSLCKDKAVSDAYQLYSEMITKRISPDVVTFNSLILGFCVVGQLKEAFGLF 257

Query: 392 DEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKA 451
            EM L N+ PD+ T++IL+D LCK+  +  A  +  ++        +  ++ L+DG C  
Sbjct: 258 HEMVLKNINPDVYTFSILVDALCKDGNITRAKNMLAVMMKQGVIPDVVTYSSLMDGYCLV 317

Query: 452 GRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTF 511
             ++ A  +F  + + G+ P   +Y+IMI+GL +   +++A      M   G AP+ VT+
Sbjct: 318 NEVNKAKHVFSTMSRLGVAPHAHSYNIMINGLGKIKMVDEALSLFKEMCCKGIAPDTVTY 377

Query: 512 NTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDT-TFSIVVDLLAKDEKYHECSAVSK 569
           N+L+ G  +  + S   +L+ +M     N +P D  T++ ++D+L K+    +  A+ K
Sbjct: 378 NSLIDGLCKLGRISYAWQLVDEM---HNNGIPADILTYNSLIDVLCKNHHIDKAIALVK 433


>gi|18407744|ref|NP_564809.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169913|sp|Q9CAM8.1|PP100_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63150
 gi|12323259|gb|AAG51611.1|AC010795_15 unknown protein; 70626-72515 [Arabidopsis thaliana]
 gi|15810427|gb|AAL07101.1| unknown protein [Arabidopsis thaliana]
 gi|24030501|gb|AAN41397.1| unknown protein [Arabidopsis thaliana]
 gi|332195941|gb|AEE34062.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 629

 Score =  342 bits (876), Expect = 4e-91,   Method: Compositional matrix adjust.
 Identities = 198/568 (34%), Positives = 298/568 (52%), Gaps = 74/568 (13%)

Query: 51  SGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDF 110
           S II +++A   FG M   +P P I  FN L  AVAK   ++ VIS   ++ ++G+  D 
Sbjct: 59  SDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDL 118

Query: 111 LTLNILINCFGNKER----------------------------GLCVENRIKEATWLFKN 142
            T +I INCF  + +                            G C   RI +A  L   
Sbjct: 119 YTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQ 178

Query: 143 MIAFGVR-----------------------------------PDVITYGTLINGFCRTGN 167
           M+  G +                                   PD++TYGT++NG C+ G+
Sbjct: 179 MVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGD 238

Query: 168 LSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPA 227
           + +AL L  KM +         K N+  ++ IIDSLCK   V+ A +LF EM+ +GI P 
Sbjct: 239 IDLALNLLNKMEAARI------KANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPN 292

Query: 228 VVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLE 287
           VV   +LI+  C  G W + + L   ML+    PN++TFN +ID   K GK+ EA  L E
Sbjct: 293 VVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHE 352

Query: 288 LMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKIL 347
            MIQR ++PD  TYN L++G+C+  R+D A+++F  M SK C   + +YN LING+CK  
Sbjct: 353 EMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCK 412

Query: 348 NVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYN 407
            VE+ + L+R++   G+    +TY T++ G FQAG    AQ +F +M    V  D+ TY+
Sbjct: 413 RVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYS 472

Query: 408 ILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQK 467
           IL+ GLC    +  A+ +F  L+ ++ E  I I+N +I+G+CKAG++  AW+LF  L  K
Sbjct: 473 ILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIK 532

Query: 468 GLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKV 527
              P VVTY+ MI GLC K  L++A+D    M+++G  PN  T+NTL+   L++   +  
Sbjct: 533 ---PDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAAS 589

Query: 528 VELLHKMAEPERNLVPDDTTFSIVVDLL 555
            EL+ +M       V D +T S+V ++L
Sbjct: 590 AELIKEMRSS--GFVGDASTISLVTNML 615



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 138/530 (26%), Positives = 250/530 (47%), Gaps = 32/530 (6%)

Query: 54  INLNEARYFFGYMTHMQPSPP-ISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLT 112
           I+L   R F  +      +PP + SF  L G+    R + +    YR+++    L D + 
Sbjct: 5   ISLTAKRLFVHWNLQGIGNPPTVPSFFNLCGSGCWERSFASASGDYREILR-NRLSDII- 62

Query: 113 LNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVAL 172
                              ++ +A  LF +M+     P ++ +  L++   +     + +
Sbjct: 63  -------------------KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVI 103

Query: 173 RLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCT 232
            L ++M +      L    ++++YSI I+  C+   +  A  +  +M   G  P +V  +
Sbjct: 104 SLGEQMQT------LGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLS 157

Query: 233 TLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQR 292
           +L++G+C +    +   L  +M+++G +P+  TF  +I  L    K +EA  L++ M+QR
Sbjct: 158 SLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQR 217

Query: 293 GLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEA 352
           G  PD  TY ++++G C  G ID A  +   M +   K  VV +N +I+  CK  +VE A
Sbjct: 218 GCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVA 277

Query: 353 MSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDG 412
           + L+ ++ + G+R  V+TYN+L++ L   G+   A +L   M    + P++ T+N LID 
Sbjct: 278 VDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDA 337

Query: 413 LCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPT 472
             K   + EA KL   +     +     +N LI+G C   RLD A ++F  +  K  +P 
Sbjct: 338 FFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPN 397

Query: 473 VVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLH 532
           + TY+ +I+G C+  ++E   +    M + G   N VT+ T++ GF Q         +  
Sbjct: 398 IQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFK 457

Query: 533 KMAEPERNLVPDDT-TFSIVVDLLAKDEKYHECSAVSKSSYRACLYVTIF 581
           +M     N VP D  T+SI++  L    K      + K   ++ + + IF
Sbjct: 458 QMVS---NRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIF 504


>gi|357499777|ref|XP_003620177.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495192|gb|AES76395.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 612

 Score =  342 bits (876), Expect = 5e-91,   Method: Compositional matrix adjust.
 Identities = 184/500 (36%), Positives = 284/500 (56%), Gaps = 34/500 (6%)

Query: 63  FGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCF-- 120
           F  + ++ P+PPI  F  + G++ K   Y   IS +R++   G+  D +T NILINCF  
Sbjct: 44  FNRILNINPTPPIFEFGKILGSLVKINCYQTAISLHREMEFNGIASDLVTFNILINCFSQ 103

Query: 121 -GNKE-------------------------RGLCVENRIKEATWLFKNMIAFGVRPDVIT 154
            G+                           +GLC++ +I +A      ++A G   + + 
Sbjct: 104 LGHTHFSFSVFANILKKGYEPNAITLTTLIKGLCLKGQIHQALHFHDKVVALGFHLNKVC 163

Query: 155 YGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKE 214
           YGTLING C+ G  S AL+L +++      +G + + N+  Y+ IIDS+CK  LV++A +
Sbjct: 164 YGTLINGLCKVGQTSAALQLLRRV------DGKLVQPNVVMYNTIIDSMCKVKLVNEAFD 217

Query: 215 LFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLC 274
           L+ EM  +GI+P VV  + LI GFC  G   +  GLF +M+     P++ TF++++D  C
Sbjct: 218 LYSEMVSKGISPDVVTYSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFC 277

Query: 275 KGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVV 334
           K G++ EA  +L +M+++G+ PD  TY SLMDGYCLV +++ A+ IF +M   G    V 
Sbjct: 278 KEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQ 337

Query: 335 SYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEM 394
           SYNI+ING+CKI  V+EAM+L++++    +   V+TYN+L+ GL ++G+  YA KL DEM
Sbjct: 338 SYNIMINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEM 397

Query: 395 KLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRL 454
               V  D  TYN ++D LCKN+ V +A+ L   ++    +  +  +  LIDGLCK GRL
Sbjct: 398 HDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDGLCKGGRL 457

Query: 455 DNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTL 514
            +A  +F  L  KG   TV TY++MI G C     +KA   L  ME NGC PN  T+  +
Sbjct: 458 KDAQNIFEDLLVKGYNITVYTYTVMIQGFCDNDLFDKALALLSKMEDNGCIPNAKTYEII 517

Query: 515 MHGFLQNNKTSKVVELLHKM 534
           +    + ++     +LL +M
Sbjct: 518 ILSLFEKDENDMAEKLLREM 537



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 114/393 (29%), Positives = 204/393 (51%), Gaps = 13/393 (3%)

Query: 78  FNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEAT 137
           +  L   + K     A +   R++    + P+ +  N +I+        +C    + EA 
Sbjct: 164 YGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIID-------SMCKVKLVNEAF 216

Query: 138 WLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYS 197
            L+  M++ G+ PDV+TY  LI+GFC  G L+ A+ L  KM+S +         +++++S
Sbjct: 217 DLYSEMVSKGISPDVVTYSALISGFCILGKLNDAIGLFNKMISEEIN------PDVYTFS 270

Query: 198 IIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDL 257
           I++D  CKEG V +AK +   M  +GI P VV   +L+ G+C      +   +F  M   
Sbjct: 271 ILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQG 330

Query: 258 GPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTA 317
           G   N+ ++N+MI+  CK  K++EA  L + M  + + PD  TYNSL+DG C  G+I  A
Sbjct: 331 GVTANVQSYNIMINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYA 390

Query: 318 REIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSG 377
            ++   MH +G  H  ++YN +++  CK   V++A++L  ++   G++  + TY  L+ G
Sbjct: 391 LKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDG 450

Query: 378 LFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFG 437
           L + G+   AQ +F+++ +      + TY ++I G C N+   +A+ L   +E N     
Sbjct: 451 LCKGGRLKDAQNIFEDLLVKGYNITVYTYTVMIQGFCDNDLFDKALALLSKMEDNGCIPN 510

Query: 438 IEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLV 470
            + +  +I  L +    D A +L  ++  +GL+
Sbjct: 511 AKTYEIIILSLFEKDENDMAEKLLREMIARGLL 543



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 113/418 (27%), Positives = 218/418 (52%), Gaps = 8/418 (1%)

Query: 140 FKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSII 199
           F  ++     P +  +G ++    +      A+ LH++M      NG+ S  ++ +++I+
Sbjct: 44  FNRILNINPTPPIFEFGKILGSLVKINCYQTAISLHREMEF----NGIAS--DLVTFNIL 97

Query: 200 IDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGP 259
           I+   + G    +  +F  +  +G  P  +  TTLI G C  G   +      +++ LG 
Sbjct: 98  INCFSQLGHTHFSFSVFANILKKGYEPNAITLTTLIKGLCLKGQIHQALHFHDKVVALGF 157

Query: 260 RPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTARE 319
             N + +  +I+ LCK G+ + A  LL  +  + + P+   YN+++D  C V  ++ A +
Sbjct: 158 HLNKVCYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFD 217

Query: 320 IFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLF 379
           ++  M SKG    VV+Y+ LI+G+C +  + +A+ L+ ++IS  +   V T++ L+ G  
Sbjct: 218 LYSEMVSKGISPDVVTYSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFC 277

Query: 380 QAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIE 439
           + G+   A+ +   M    ++PD+ TY  L+DG C    V +A  +F+ +        ++
Sbjct: 278 KEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQ 337

Query: 440 IFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYM 499
            +N +I+G CK  ++D A  LF ++  K ++P VVTY+ +I GLC+ GK+  A   +  M
Sbjct: 338 SYNIMINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEM 397

Query: 500 EKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAK 557
              G   + +T+N+++    +N++  K + LL KM   +  + PD  T++I++D L K
Sbjct: 398 HDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMK--DEGIQPDMYTYTILIDGLCK 453



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 117/396 (29%), Positives = 206/396 (52%), Gaps = 12/396 (3%)

Query: 182 DYENGLISKTN----------IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVC 231
           D E+ L+S  N          IF +  I+ SL K      A  L  EM+  GI   +V  
Sbjct: 35  DDEHSLVSSFNRILNINPTPPIFEFGKILGSLVKINCYQTAISLHREMEFNGIASDLVTF 94

Query: 232 TTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQ 291
             LI+ F   G+      +F  +L  G  PN +T   +I  LC  G+I++A    + ++ 
Sbjct: 95  NILINCFSQLGHTHFSFSVFANILKKGYEPNAITLTTLIKGLCLKGQIHQALHFHDKVVA 154

Query: 292 RGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEE 351
            G + ++  Y +L++G C VG+   A ++   +  K  +  VV YN +I+  CK+  V E
Sbjct: 155 LGFHLNKVCYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNE 214

Query: 352 AMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILID 411
           A  LY +++S G+   V+TY+ L+SG    G+   A  LF++M    + PD+ T++IL+D
Sbjct: 215 AFDLYSEMVSKGISPDVVTYSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVD 274

Query: 412 GLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVP 471
           G CK   V+EA  +  M+     +  +  +  L+DG C   +++ A  +F+ + Q G+  
Sbjct: 275 GFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTA 334

Query: 472 TVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELL 531
            V +Y+IMI+G C+  K+++A +    M      P+VVT+N+L+ G  ++ K S  ++L+
Sbjct: 335 NVQSYNIMINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLV 394

Query: 532 HKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAV 567
            +M   +R +  D  T++ ++D L K+ +  +  A+
Sbjct: 395 DEMH--DRGVPHDKITYNSILDALCKNHQVDKAIAL 428



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 109/373 (29%), Positives = 187/373 (50%), Gaps = 13/373 (3%)

Query: 72  SPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVEN 131
            P +  +N +  ++ K +  +     Y ++VS G+ PD +T + LI+       G C+  
Sbjct: 193 QPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYSALIS-------GFCILG 245

Query: 132 RIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKT 191
           ++ +A  LF  MI+  + PDV T+  L++GFC+ G +  A    K +++   + G+  K 
Sbjct: 246 KLNDAIGLFNKMISEEINPDVYTFSILVDGFCKEGRVKEA----KNVLAMMMKQGI--KP 299

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
           ++ +Y  ++D  C    V+KAK +F  M   G+   V     +I+GFC     +E   LF
Sbjct: 300 DVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMINGFCKIKKVDEAMNLF 359

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
            EM      P+++T+N +ID LCK GKI+ A  L++ M  RG+  D+ TYNS++D  C  
Sbjct: 360 KEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRGVPHDKITYNSILDALCKN 419

Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
            ++D A  +   M  +G +  + +Y ILI+G CK   +++A +++  ++  G   TV TY
Sbjct: 420 HQVDKAIALLTKMKDEGIQPDMYTYTILIDGLCKGGRLKDAQNIFEDLLVKGYNITVYTY 479

Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
             ++ G         A  L  +M+     P+  TY I+I  L + +    A KL   +  
Sbjct: 480 TVMIQGFCDNDLFDKALALLSKMEDNGCIPNAKTYEIIILSLFEKDENDMAEKLLREMIA 539

Query: 432 NKFEFGIEIFNCL 444
               FG +   CL
Sbjct: 540 RGLLFGWKKAYCL 552


>gi|334183602|ref|NP_176522.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806282|sp|Q9C8T7.2|PP101_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63330
 gi|332195966|gb|AEE34087.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 559

 Score =  342 bits (876), Expect = 5e-91,   Method: Compositional matrix adjust.
 Identities = 182/507 (35%), Positives = 289/507 (57%), Gaps = 17/507 (3%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           C+   I+L  A    G M  +   P I + + L       +     ++   ++V +G  P
Sbjct: 56  CRRSQISL--ALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRP 113

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           D +T   LI+       GL + N+  EA  L   M+  G +P+++TYG ++NG C+ G++
Sbjct: 114 DTITFTTLIH-------GLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDI 166

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
            +A  L  KM +   E       ++  ++ IIDSLCK   VD A  LF EM+ +GI P V
Sbjct: 167 DLAFNLLNKMEAAKIE------ADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNV 220

Query: 229 VVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLEL 288
           V  ++LI   C  G W + + L  +M++    PNL+TFN +ID   K GK  EA  L + 
Sbjct: 221 VTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDD 280

Query: 289 MIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILN 348
           MI+R ++PD FTYNSL++G+C+  R+D A+++F  M SK C   + +YN LI G+CK   
Sbjct: 281 MIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKR 340

Query: 349 VEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNI 408
           VE+   L+R++   G+    +TY TL+ GLF  G    AQK+F +M    V PD+ TY+I
Sbjct: 341 VEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSI 400

Query: 409 LIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKG 468
           L+DGLC N  +++A+++F  ++ ++ +  I I+  +I+G+CKAG++D+ W+LF  L  KG
Sbjct: 401 LLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKG 460

Query: 469 LVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVV 528
           + P VVTY+ MI GLC K  L++A   L  M+++G  P+  T+NTL+   L++   +   
Sbjct: 461 VKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASA 520

Query: 529 ELLHKMAEPERNLVPDDTTFSIVVDLL 555
           EL+ +M       V D +T  +V ++L
Sbjct: 521 ELIREMRSCR--FVGDASTIGLVANML 545



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 119/433 (27%), Positives = 216/433 (49%), Gaps = 12/433 (2%)

Query: 150 PDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLV 209
           P +  +  L++   +     + + L +KM        L    N+++Y+I+I+  C+   +
Sbjct: 8   PSIFEFNKLLSAIAKMKKFDLVISLGEKM------QRLGISHNLYTYNILINCFCRRSQI 61

Query: 210 DKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVM 269
             A  L  +M   G  P++V  ++L++G+C      +   L  +M+++G RP+ +TF  +
Sbjct: 62  SLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTL 121

Query: 270 IDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGC 329
           I  L    K +EA  L++ M+QRG  P+  TY  +++G C  G ID A  +   M +   
Sbjct: 122 IHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKI 181

Query: 330 KHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQK 389
           +  VV +N +I+  CK  +V++A++L++++ + G+R  V+TY++L+S L   G+   A +
Sbjct: 182 EADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQ 241

Query: 390 LFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLC 449
           L  +M    + P+L T+N LID   K     EA KL   +     +  I  +N LI+G C
Sbjct: 242 LLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFC 301

Query: 450 KAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVV 509
              RLD A ++F  +  K   P + TY+ +I G C+  ++E   +    M   G   + V
Sbjct: 302 MHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTV 361

Query: 510 TFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAV-- 567
           T+ TL+ G   +       ++  +M      + PD  T+SI++D L  + K  +   V  
Sbjct: 362 TYTTLIQGLFHDGDCDNAQKVFKQMVSD--GVPPDIMTYSILLDGLCNNGKLEKALEVFD 419

Query: 568 --SKSSYRACLYV 578
              KS  +  +Y+
Sbjct: 420 YMQKSEIKLDIYI 432



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 98/300 (32%), Positives = 164/300 (54%), Gaps = 2/300 (0%)

Query: 254 MLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGR 313
           M+   P P++  FN ++  + K  K +    L E M + G++ + +TYN L++ +C   +
Sbjct: 1   MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60

Query: 314 IDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNT 373
           I  A  +   M   G + ++V+ + L+NGYC    + +A++L  Q++  G R   IT+ T
Sbjct: 61  ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 120

Query: 374 LLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNK 433
           L+ GLF   +A  A  L D M     +P+L TY ++++GLCK   +  A  L + +E  K
Sbjct: 121 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAK 180

Query: 434 FEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKAN 493
            E  + IFN +ID LCK   +D+A  LF ++  KG+ P VVTYS +I  LC  G+   A+
Sbjct: 181 IEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDAS 240

Query: 494 DFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
             L  M +    PN+VTFN L+  F++  K  +  +L   M   +R++ PD  T++ +++
Sbjct: 241 QLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMI--KRSIDPDIFTYNSLIN 298


>gi|357499785|ref|XP_003620181.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495196|gb|AES76399.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 559

 Score =  342 bits (876), Expect = 5e-91,   Method: Compositional matrix adjust.
 Identities = 181/501 (36%), Positives = 286/501 (57%), Gaps = 35/501 (6%)

Query: 63  FGYMTHMQ-PSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFG 121
           F  + H + P P I  F  + G++ K+ HY  V+S +R++   G+  D + L+ILINCF 
Sbjct: 59  FNRLLHQKNPKPSIFQFGKILGSLVKSNHYSTVVSLHRQMEFNGITSDLVILSILINCFS 118

Query: 122 NKE----------------------------RGLCVENRIKEATWLFKNMIAFGVRPDVI 153
                                          +GLC++ +I +A      ++A G   + +
Sbjct: 119 QLGQNPLSFSVLAKILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKVVALGFHLNKV 178

Query: 154 TYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAK 213
           +YGTLING C+ G  S AL+L +++      +G + + N+  Y+ IIDS+CK  LV++A 
Sbjct: 179 SYGTLINGLCKVGQTSAALQLLRRV------DGKLVQPNVVMYNTIIDSMCKVKLVNEAF 232

Query: 214 ELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCL 273
           +L+ EM  +GI+P VV    LI GFC  G  ++   LF +M+     PN+ TFN+++D  
Sbjct: 233 DLYSEMVSKGISPDVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGF 292

Query: 274 CKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTV 333
           CK  ++ EA  +L +M+++G+ PD FTYNSLMD YCLV  ++ A+ IF ++  +G    +
Sbjct: 293 CKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNI 352

Query: 334 VSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDE 393
            SY+I+I+G+CKI  V+EAM+L++++  N +   V+TYN+L+ GL + G+  YA KL DE
Sbjct: 353 HSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDE 412

Query: 394 MKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGR 453
           M    V  D  TYN ++D LCKN+ V +A+ L   ++    +  I  +  L+DGLCK GR
Sbjct: 413 MHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGLCKNGR 472

Query: 454 LDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNT 513
           L++A  +F  L  KG +  V  Y+ MI G C  G  +++ D L  ME+NGC PN VT+  
Sbjct: 473 LEDARIVFEDLLVKGYILDVNIYTAMIQGFCSHGLFDESLDLLSKMEENGCIPNAVTYEI 532

Query: 514 LMHGFLQNNKTSKVVELLHKM 534
           ++      ++  K  +LL +M
Sbjct: 533 IICSLFDKDENDKAEKLLREM 553



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 114/378 (30%), Positives = 206/378 (54%), Gaps = 2/378 (0%)

Query: 190 KTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNG 249
           K +IF +  I+ SL K         L  +M+  GI   +V+ + LI+ F   G       
Sbjct: 69  KPSIFQFGKILGSLVKSNHYSTVVSLHRQMEFNGITSDLVILSILINCFSQLGQNPLSFS 128

Query: 250 LFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYC 309
           +  ++L +G  PN++T   +I  LC  G+I++A    + ++  G + ++ +Y +L++G C
Sbjct: 129 VLAKILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKVVALGFHLNKVSYGTLINGLC 188

Query: 310 LVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVI 369
            VG+   A ++   +  K  +  VV YN +I+  CK+  V EA  LY +++S G+   V+
Sbjct: 189 KVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVV 248

Query: 370 TYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHML 429
           TYN L+SG    G+   A  LF++M   N+ P++ T+NIL+DG CK   ++EA  +  M+
Sbjct: 249 TYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKERRLKEAKNVLAMM 308

Query: 430 EMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKL 489
                +  +  +N L+D  C    ++ A  +F+ + Q+G+ P + +YSIMIHG C+  K+
Sbjct: 309 MKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKV 368

Query: 490 EKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFS 549
           ++A +    M  N   P+VVT+N+L+ G  +  K S  ++L+ +M   +R +  D  T++
Sbjct: 369 DEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMH--DRGVPHDKITYN 426

Query: 550 IVVDLLAKDEKYHECSAV 567
            ++D L K+ +  +  A+
Sbjct: 427 SILDALCKNHQVDKAIAL 444



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 114/419 (27%), Positives = 214/419 (51%), Gaps = 8/419 (1%)

Query: 149 RPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGL 208
           +P +  +G ++    ++ + S  + LH++M      NG+ S   I S  I+I+   + G 
Sbjct: 69  KPSIFQFGKILGSLVKSNHYSTVVSLHRQMEF----NGITSDLVILS--ILINCFSQLGQ 122

Query: 209 VDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNV 268
              +  +  ++   G  P V+  TTLI G C  G   +      +++ LG   N +++  
Sbjct: 123 NPLSFSVLAKILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKVVALGFHLNKVSYGT 182

Query: 269 MIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKG 328
           +I+ LCK G+ + A  LL  +  + + P+   YN+++D  C V  ++ A +++  M SKG
Sbjct: 183 LINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKG 242

Query: 329 CKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQ 388
               VV+YN LI+G+C +  +++A  L+ ++I   +   V T+N L+ G  +  +   A+
Sbjct: 243 ISPDVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKERRLKEAK 302

Query: 389 KLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGL 448
            +   M    ++PD+ TYN L+D  C    V +A  +F+ +        I  ++ +I G 
Sbjct: 303 NVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGF 362

Query: 449 CKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNV 508
           CK  ++D A  LF ++    ++P VVTY+ +I GLC+ GK+  A   +  M   G   + 
Sbjct: 363 CKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPHDK 422

Query: 509 VTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAV 567
           +T+N+++    +N++  K + LL KM   +  + PD  T++ +VD L K+ +  +   V
Sbjct: 423 ITYNSILDALCKNHQVDKAIALLTKMK--DEGIQPDICTYTTLVDGLCKNGRLEDARIV 479



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 76/305 (24%), Positives = 155/305 (50%), Gaps = 2/305 (0%)

Query: 259 PRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAR 318
           P+P++  F  ++  L K    +    L   M   G+  D    + L++ +  +G+   + 
Sbjct: 68  PKPSIFQFGKILGSLVKSNHYSTVVSLHRQMEFNGITSDLVILSILINCFSQLGQNPLSF 127

Query: 319 EIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGL 378
            +   +   G +  V++   LI G C    + +A+  + ++++ G     ++Y TL++GL
Sbjct: 128 SVLAKILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKVVALGFHLNKVSYGTLINGL 187

Query: 379 FQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGI 438
            + GQ   A +L   +    V+P++  YN +ID +CK   V EA  L+  +        +
Sbjct: 188 CKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDV 247

Query: 439 EIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLY 498
             +N LI G C  G++ +A +LF+K+  + + P V T++I++ G C++ +L++A + L  
Sbjct: 248 VTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKERRLKEAKNVLAM 307

Query: 499 MEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKD 558
           M K G  P+V T+N+LM  +    + +K   + + ++  +R + P+  ++SI++    K 
Sbjct: 308 MMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTIS--QRGVNPNIHSYSIMIHGFCKI 365

Query: 559 EKYHE 563
           +K  E
Sbjct: 366 KKVDE 370



 Score =  112 bits (279), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 74/276 (26%), Positives = 131/276 (47%), Gaps = 2/276 (0%)

Query: 278 KINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYN 337
           K N  +    L+ Q+   P  F +  ++          T   +   M   G    +V  +
Sbjct: 52  KHNLVSSFNRLLHQKNPKPSIFQFGKILGSLVKSNHYSTVVSLHRQMEFNGITSDLVILS 111

Query: 338 ILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLY 397
           ILIN + ++     + S+  +I+  G    VIT  TL+ GL   GQ   A +  D++   
Sbjct: 112 ILINCFSQLGQNPLSFSVLAKILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKVVAL 171

Query: 398 NVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNA 457
               +  +Y  LI+GLCK      A++L   ++    +  + ++N +ID +CK   ++ A
Sbjct: 172 GFHLNKVSYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEA 231

Query: 458 WELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHG 517
           ++L+ ++  KG+ P VVTY+ +I G C  GK++ A D    M      PNV TFN L+ G
Sbjct: 232 FDLYSEMVSKGISPDVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDG 291

Query: 518 FLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
           F +  +  +   +L  M   ++ + PD  T++ ++D
Sbjct: 292 FCKERRLKEAKNVLAMMM--KQGIKPDVFTYNSLMD 325



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 69/263 (26%), Positives = 125/263 (47%), Gaps = 2/263 (0%)

Query: 324 MHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQ 383
           +H K  K ++  +  ++    K  +    +SL+RQ+  NG+   ++  + L++   Q GQ
Sbjct: 63  LHQKNPKPSIFQFGKILGSLVKSNHYSTVVSLHRQMEFNGITSDLVILSILINCFSQLGQ 122

Query: 384 AGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNC 443
              +  +  ++     EP++ T   LI GLC    + +A++    +    F      +  
Sbjct: 123 NPLSFSVLAKILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKVVALGFHLNKVSYGT 182

Query: 444 LIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNG 503
           LI+GLCK G+   A +L  ++  K + P VV Y+ +I  +C+   + +A D    M   G
Sbjct: 183 LINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKG 242

Query: 504 CAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
            +P+VVT+N L+ GF    K     +L +KM     N+ P+  TF+I+VD   K+ +  E
Sbjct: 243 ISPDVVTYNALISGFCIVGKMKDATDLFNKMIF--ENINPNVYTFNILVDGFCKERRLKE 300

Query: 564 CSAVSKSSYRACLYVTIFQPSSL 586
              V     +  +   +F  +SL
Sbjct: 301 AKNVLAMMMKQGIKPDVFTYNSL 323


>gi|297837161|ref|XP_002886462.1| binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297332303|gb|EFH62721.1| binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 550

 Score =  342 bits (876), Expect = 5e-91,   Method: Compositional matrix adjust.
 Identities = 176/454 (38%), Positives = 262/454 (57%), Gaps = 13/454 (2%)

Query: 54  INLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTL 113
           I L++A   F  M   +P P I  FN L  A+ K + YD VIS  +K+  +G+  D  T 
Sbjct: 64  IKLHDAINLFREMVKTRPFPSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRNDLYTF 123

Query: 114 NILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALR 173
           NI+INCF       C   ++  A  +   M+  G  PD +T G+L+NGFCR   +S A+ 
Sbjct: 124 NIVINCF-------CCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVS 176

Query: 174 LHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTT 233
           L  KMV   Y      + +I +Y+ IIDSLCK   V+ A + F E+  +GI P VV  T 
Sbjct: 177 LVDKMVEIGY------RPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTA 230

Query: 234 LIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRG 293
           L++G C +G W +   L  +M+     PN++T++ ++D   K GK+ EA  + E M++  
Sbjct: 231 LVNGLCNSGRWNDAARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMS 290

Query: 294 LNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAM 353
           ++PD  TY+SL++G CL  RID A ++F  M SKGC   VVSYN LING+CK   VE+ M
Sbjct: 291 IDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGM 350

Query: 354 SLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGL 413
            L+R++   G+    +TYNTL+ G FQ G    AQ+ F +M  + V PD+ TYNIL+ GL
Sbjct: 351 KLFRKMSQRGLVNNTVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNILLGGL 410

Query: 414 CKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTV 473
           C N  +++A+ +F  ++ ++ +  I  +  +I G+CK G++++AW LF  L  KGL P +
Sbjct: 411 CDNGLLEKALVIFEDMQKSEMDLDIVTYTTVIQGMCKTGKVEDAWGLFCSLSLKGLKPDI 470

Query: 474 VTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPN 507
           VTY+ M+ GLC KG   +       M++ G   N
Sbjct: 471 VTYTTMMSGLCTKGLQHEVEALYTKMKQEGLMKN 504



 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 128/428 (29%), Positives = 216/428 (50%), Gaps = 21/428 (4%)

Query: 48  NCKSGIINLNEARYFFGYMTHMQPSPP-ISSFNLLFGAVAKNRHYDAVISFYRKLVSIGL 106
           NC      ++ A    G M  +   P  ++  +L+ G   +NR  DAV S   K+V IG 
Sbjct: 128 NCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAV-SLVDKMVEIGY 186

Query: 107 LPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTG 166
            PD +  N +I+        LC   R+ +A   FK +   G+RP+V+TY  L+NG C +G
Sbjct: 187 RPDIVAYNAIID-------SLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSG 239

Query: 167 NLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINP 226
             + A RL + M+            N+ +YS ++D+  K G V +AKE+F EM    I+P
Sbjct: 240 RWNDAARLLRDMIKRKIT------PNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDP 293

Query: 227 AVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLL 286
            +V  ++LI+G C     +E N +F  M+  G  P+++++N +I+  CK  ++ +   L 
Sbjct: 294 DIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLF 353

Query: 287 ELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKI 346
             M QRGL  +  TYN+L+ G+  VG +D A+E F  M S G    + +YNIL+ G C  
Sbjct: 354 RKMSQRGLVNNTVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNILLGGLCDN 413

Query: 347 LNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTY 406
             +E+A+ ++  +  + +   ++TY T++ G+ + G+   A  LF  + L  ++PD+ TY
Sbjct: 414 GLLEKALVIFEDMQKSEMDLDIVTYTTVIQGMCKTGKVEDAWGLFCSLSLKGLKPDIVTY 473

Query: 407 NILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQ 466
             ++ GLC      E   L+  ++         +  CL D     G +  + EL  K+  
Sbjct: 474 TTMMSGLCTKGLQHEVEALYTKMKQEGLMKNDSML-CLGD-----GDITISAELIKKMLS 527

Query: 467 KGLVPTVV 474
            G  P+++
Sbjct: 528 CGYAPSLL 535



 Score =  195 bits (495), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 116/436 (26%), Positives = 221/436 (50%), Gaps = 8/436 (1%)

Query: 132 RIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKT 191
           ++ +A  LF+ M+     P ++ +  L++   +     V + L KKM        L  + 
Sbjct: 65  KLHDAINLFREMVKTRPFPSIVDFNRLLSAIVKMKKYDVVISLGKKM------EVLGIRN 118

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
           ++++++I+I+  C    V  A  +  +M   G  P  V   +L++GFC      +   L 
Sbjct: 119 DLYTFNIVINCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLV 178

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
            +M+++G RP+++ +N +ID LCK  ++N+A    + + ++G+ P+  TY +L++G C  
Sbjct: 179 DKMVEIGYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNS 238

Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
           GR + A  +   M  +     V++Y+ L++ + K   V EA  ++ +++   +   ++TY
Sbjct: 239 GRWNDAARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTY 298

Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
           ++L++GL    +   A ++FD M      PD+ +YN LI+G CK   V++ +KLF  +  
Sbjct: 299 SSLINGLCLHDRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQ 358

Query: 432 NKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEK 491
                    +N LI G  + G +D A E F ++   G+ P + TY+I++ GLC  G LEK
Sbjct: 359 RGLVNNTVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNILLGGLCDNGLLEK 418

Query: 492 ANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIV 551
           A      M+K+    ++VT+ T++ G  +  K      L   ++   + L PD  T++ +
Sbjct: 419 ALVIFEDMQKSEMDLDIVTYTTVIQGMCKTGKVEDAWGLFCSLS--LKGLKPDIVTYTTM 476

Query: 552 VDLLAKDEKYHECSAV 567
           +  L      HE  A+
Sbjct: 477 MSGLCTKGLQHEVEAL 492



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 63/242 (26%), Positives = 122/242 (50%), Gaps = 6/242 (2%)

Query: 347 LNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTY 406
           + + +A++L+R+++      +++ +N LLS + +  +      L  +M++  +  DL T+
Sbjct: 64  IKLHDAINLFREMVKTRPFPSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRNDLYTF 123

Query: 407 NILIDGLCKNNCVQEAVKLFHMLEMNK--FEFGIEIFNCLIDGLCKAGRLDNAWELFHKL 464
           NI+I+  C   C Q ++ L  + +M K  +E        L++G C+  R+ +A  L  K+
Sbjct: 124 NIVINCFC--CCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 181

Query: 465 PQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKT 524
            + G  P +V Y+ +I  LC+  ++  A DF   + + G  PNVVT+  L++G   + + 
Sbjct: 182 VEIGYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRW 241

Query: 525 SKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKSSYRACLYVTIFQPS 584
           +    LL  M +  R + P+  T+S ++D   K+ K  E   + +   R  +   I   S
Sbjct: 242 NDAARLLRDMIK--RKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYS 299

Query: 585 SL 586
           SL
Sbjct: 300 SL 301


>gi|147742764|gb|ABQ50546.1| hypothetical protein [Brassica rapa]
          Length = 650

 Score =  341 bits (875), Expect = 6e-91,   Method: Compositional matrix adjust.
 Identities = 203/621 (32%), Positives = 329/621 (52%), Gaps = 81/621 (13%)

Query: 10  LFSSETVSKVKLSSLFKSPRQ----IAAVS--SPETQLNEFLHENCKSGIINL--NEARY 61
           L S+ET   ++ ++ F+SP +    +   S  + + +++ +  E  +SG++++  ++A  
Sbjct: 19  LRSTET-GTLRNAAFFQSPYEFFFCVQGFSGLTSDRKMSSY-KERLRSGLVDIKKDDAVA 76

Query: 62  FFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFG 121
            F  M   +P P +  FN LFG +A+ + YD V++  +++   G+  D  TLNI+INCF 
Sbjct: 77  LFQSMLRSRPLPTVIDFNRLFGLLARTKQYDLVLALCKQMELKGIAYDLYTLNIMINCFC 136

Query: 122 NKER----------------------------GLCVE----------------------- 130
            + +                            GLC+E                       
Sbjct: 137 RRRKLGFAFSAMGKIFKLGYEPNTVTFNTLLNGLCLEGRVFEAVELVDCMVLSQHVPDLI 196

Query: 131 ------------NRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKM 178
                       +R+ EA  L   M+A G +P+  TYG ++N  C++GN + AL L +KM
Sbjct: 197 TLNTIVNGLCLKDRVSEAVDLIARMMANGCQPNQFTYGPILNRMCKSGNTASALDLLRKM 256

Query: 179 VSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGF 238
                E+  I K ++ +Y+IIID+LCK+G +D A   F EM+ +GI   V    +LI  F
Sbjct: 257 -----EHRKI-KPHVVTYTIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGSF 310

Query: 239 CCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDR 298
           C  G W++   L  +M+     PN++TF+ +ID L K GK+ EA  L   MI RG+ P+ 
Sbjct: 311 CSFGRWDDGAQLLRDMITRKITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNT 370

Query: 299 FTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQ 358
            TYNSL+ G C   R+D A ++   M SKGC   + +YNILING+CK   V++ M L+R+
Sbjct: 371 ITYNSLIYGLCNDKRLDEANQMMDLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRK 430

Query: 359 IISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNC 418
           +   G+    +TY+TL+ G  Q+ +   A+K+F EM    V P + TY IL+DGLC N  
Sbjct: 431 MSLRGMIADTVTYSTLIQGFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAILLDGLCDNGE 490

Query: 419 VQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSI 478
           ++EA+ +   +   K E  I I+N +I G+C A ++D+AW LF  LP KG+   + +Y+I
Sbjct: 491 LEEALGILDQMHKCKMELDIGIYNIIIHGMCNANKVDDAWSLFCSLPSKGVKRDIQSYNI 550

Query: 479 MIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPE 538
           M+ GLC++  L +A+     M+++G  P+  T+NTL+   L+ N  +  V+L+ +M    
Sbjct: 551 MLSGLCKRSSLSEADALFRKMKEDGYEPDGCTYNTLIRAHLRGNDITTSVQLIEEMKRC- 609

Query: 539 RNLVPDDTTFSIVVDLLAKDE 559
                D +T  IV+D+L+  E
Sbjct: 610 -GFSSDASTVKIVMDMLSSGE 629



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 137/503 (27%), Positives = 228/503 (45%), Gaps = 48/503 (9%)

Query: 111 LTLNILINCFGNKERGLCVENRIKEATWLFKNM---------IAF--------------- 146
           LT +  ++ +  + R   V+ +  +A  LF++M         I F               
Sbjct: 49  LTSDRKMSSYKERLRSGLVDIKKDDAVALFQSMLRSRPLPTVIDFNRLFGLLARTKQYDL 108

Query: 147 -----------GVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFS 195
                      G+  D+ T   +IN FCR   L  A     K+    YE       N  +
Sbjct: 109 VLALCKQMELKGIAYDLYTLNIMINCFCRRRKLGFAFSAMGKIFKLGYE------PNTVT 162

Query: 196 YSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEML 255
           ++ +++ LC EG V +A EL   M      P ++   T+++G C      E   L   M+
Sbjct: 163 FNTLLNGLCLEGRVFEAVELVDCMVLSQHVPDLITLNTIVNGLCLKDRVSEAVDLIARMM 222

Query: 256 DLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRID 315
             G +PN  T+  +++ +CK G    A  LL  M  R + P   TY  ++D  C  GR+D
Sbjct: 223 ANGCQPNQFTYGPILNRMCKSGNTASALDLLRKMEHRKIKPHVVTYTIIIDNLCKDGRLD 282

Query: 316 TAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLL 375
            A   F  M +KG K  V +YN LI  +C     ++   L R +I+  +   V+T++ L+
Sbjct: 283 DALSFFSEMETKGIKANVFTYNSLIGSFCSFGRWDDGAQLLRDMITRKITPNVVTFSALI 342

Query: 376 SGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFE 435
             L + G+   A+ L++EM    +EP+  TYN LI GLC +  + EA ++  ++     +
Sbjct: 343 DSLVKEGKLTEAKDLYNEMITRGIEPNTITYNSLIYGLCNDKRLDEANQMMDLMVSKGCD 402

Query: 436 FGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDF 495
             I  +N LI+G CKA ++D+   LF K+  +G++   VTYS +I G C+  KL  A   
Sbjct: 403 PDIWTYNILINGFCKAKQVDDGMRLFRKMSLRGMIADTVTYSTLIQGFCQSRKLIVAKKV 462

Query: 496 LLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLL 555
              M   G  P ++T+  L+ G   N +  + + +L +M + +  L  D   ++I++  +
Sbjct: 463 FQEMVSQGVHPGIMTYAILLDGLCDNGELEEALGILDQMHKCKMEL--DIGIYNIIIHGM 520

Query: 556 AKDEKYHE-----CSAVSKSSYR 573
               K  +     CS  SK   R
Sbjct: 521 CNANKVDDAWSLFCSLPSKGVKR 543



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 112/414 (27%), Positives = 198/414 (47%), Gaps = 23/414 (5%)

Query: 185 NGLISKTNIFSYSIIIDSLCKEGLVDKAKE----LFLEMKGRGINPAVVVCTTLIHGFCC 240
           +GL S   + SY        + GLVD  K+    LF  M      P V+    L      
Sbjct: 47  SGLTSDRKMSSYK----ERLRSGLVDIKKDDAVALFQSMLRSRPLPTVIDFNRLFGLLAR 102

Query: 241 AGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFT 300
              ++ V  L  +M   G   +L T N+MI+C C+  K+  A   +  + + G  P+  T
Sbjct: 103 TKQYDLVLALCKQMELKGIAYDLYTLNIMINCFCRRRKLGFAFSAMGKIFKLGYEPNTVT 162

Query: 301 YNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQII 360
           +N+L++G CL GR+  A E+   M        +++ N ++NG C    V EA+ L  +++
Sbjct: 163 FNTLLNGLCLEGRVFEAVELVDCMVLSQHVPDLITLNTIVNGLCLKDRVSEAVDLIARMM 222

Query: 361 SNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQ 420
           +NG +    TY  +L+ + ++G    A  L  +M+   ++P + TY I+ID LCK+  + 
Sbjct: 223 ANGCQPNQFTYGPILNRMCKSGNTASALDLLRKMEHRKIKPHVVTYTIIIDNLCKDGRLD 282

Query: 421 EAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMI 480
           +A+  F  +E    +  +  +N LI   C  GR D+  +L   +  + + P VVT+S +I
Sbjct: 283 DALSFFSEMETKGIKANVFTYNSLIGSFCSFGRWDDGAQLLRDMITRKITPNVVTFSALI 342

Query: 481 HGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERN 540
             L ++GKL +A D    M   G  PN +T+N+L++G   + +  +  +++  M    + 
Sbjct: 343 DSLVKEGKLTEAKDLYNEMITRGIEPNTITYNSLIYGLCNDKRLDEANQMMDLMV--SKG 400

Query: 541 LVPDDTTFSIVVDLLAKDEKYHECSAVSKSSYRACLYVTIFQPSSLGSMIGCTV 594
             PD  T++I+++   K ++  +              + +F+  SL  MI  TV
Sbjct: 401 CDPDIWTYNILINGFCKAKQVDDG-------------MRLFRKMSLRGMIADTV 441


>gi|357458533|ref|XP_003599547.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355488595|gb|AES69798.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 636

 Score =  340 bits (873), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 187/511 (36%), Positives = 282/511 (55%), Gaps = 36/511 (7%)

Query: 54  INLNEARYFFGYMTHMQPSPPISSFNLLFGAVAK--NRHYDAVISFYRKLVSIGLLPDFL 111
           I+++     F ++   +P+  I  FN + G++ K  N HY   IS  R+L   G+ PD  
Sbjct: 45  IDVDNVVSSFNHLLRTKPTSSIIEFNKILGSLVKSNNNHYPTAISLSRRLEFHGITPDIF 104

Query: 112 TLNILINC----------------------------FGNKERGLCVENRIKEATWLFKNM 143
           T NILINC                            F    +GLC+  ++KEA     ++
Sbjct: 105 TFNILINCYCHMAEMNFAFSMMAKILKMGYEPDTITFNTLIKGLCLNGKVKEALHFHDHV 164

Query: 144 IAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSL 203
           +A G   D  +YGTLING C+ G    AL++ +K+      +G + K N+  Y+ IIDSL
Sbjct: 165 LALGFHLDQFSYGTLINGLCKIGETRTALQMLRKI------DGKLVKINVVMYNTIIDSL 218

Query: 204 CKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNL 263
           CK  LV  A EL+ +M  + I+P VV  + LI+GFC  G  EE  GLF EM+     P+ 
Sbjct: 219 CKHKLVIDAYELYSQMIAKKISPDVVTFSALIYGFCIVGQLEEAFGLFREMVLKNINPDY 278

Query: 264 LTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLS 323
            TFN+++D LCK G +  A  +L +M++ G+ P+  TY+SLMDGYCLV +++ A+ +  +
Sbjct: 279 YTFNILVDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYCLVNQVNKAKHVLNT 338

Query: 324 MHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQ 383
           +   G      SY  +ING+CKI  V+EA+SL+  +   G+    +TYN+L+ GL ++G+
Sbjct: 339 ISQMGAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKVTYNSLIDGLCKSGR 398

Query: 384 AGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNC 443
             YA +L DEM       ++ TYN LID LCKN+ V +A+ L   ++    +  +  FN 
Sbjct: 399 ISYAWELVDEMHDNGQPANIFTYNCLIDALCKNHHVDQAIALVKKIKDQGIQPDMYTFNI 458

Query: 444 LIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNG 503
           LI GLCK GRL NA ++F  L  KG      TY+IM++GLC++G  ++A   L  M+ NG
Sbjct: 459 LIYGLCKVGRLKNAQDVFQDLLSKGYSVNAWTYNIMVNGLCKEGLFDEAEALLSKMDDNG 518

Query: 504 CAPNVVTFNTLMHGFLQNNKTSKVVELLHKM 534
             P+ VT+ TL+      ++  K  +LL +M
Sbjct: 519 IIPDAVTYETLIQALFHKDENEKAEKLLREM 549



 Score =  198 bits (503), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 133/480 (27%), Positives = 214/480 (44%), Gaps = 69/480 (14%)

Query: 48  NCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLL 107
           NC   +  +N A      +  M   P   +FN L   +  N      + F+  ++++G  
Sbjct: 111 NCYCHMAEMNFAFSMMAKILKMGYEPDTITFNTLIKGLCLNGKVKEALHFHDHVLALGFH 170

Query: 108 PDFLTLNILIN--CFGNKER--------------------------GLCVENRIKEATWL 139
            D  +   LIN  C   + R                           LC    + +A  L
Sbjct: 171 LDQFSYGTLINGLCKIGETRTALQMLRKIDGKLVKINVVMYNTIIDSLCKHKLVIDAYEL 230

Query: 140 FKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSII 199
           +  MIA  + PDV+T+  LI GFC  G L  A  L ++MV  +         + ++++I+
Sbjct: 231 YSQMIAKKISPDVVTFSALIYGFCIVGQLEEAFGLFREMVLKNI------NPDYYTFNIL 284

Query: 200 IDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGP 259
           +D+LCKEG +  AK + + M   G+ P VV  ++L+ G+C      +   +   +  +G 
Sbjct: 285 VDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYCLVNQVNKAKHVLNTISQMGA 344

Query: 260 RPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTARE 319
            PN  ++  MI+  CK   ++EA  L   M  +G+ PD+ TYNSL+DG C  GRI  A E
Sbjct: 345 APNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKVTYNSLIDGLCKSGRISYAWE 404

Query: 320 IFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLF 379
           +   MH  G    + +YN LI+  CK  +V++A++L ++I   G++  + T+N L+ GL 
Sbjct: 405 LVDEMHDNGQPANIFTYNCLIDALCKNHHVDQAIALVKKIKDQGIQPDMYTFNILIYGLC 464

Query: 380 QAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIE 439
           + G+   AQ +F ++       +  TYNI+++GLCK                        
Sbjct: 465 KVGRLKNAQDVFQDLLSKGYSVNAWTYNIMVNGLCKE----------------------- 501

Query: 440 IFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYM 499
                       G  D A  L  K+   G++P  VTY  +I  L  K + EKA   L  M
Sbjct: 502 ------------GLFDEAEALLSKMDDNGIIPDAVTYETLIQALFHKDENEKAEKLLREM 549



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 110/382 (28%), Positives = 194/382 (50%), Gaps = 6/382 (1%)

Query: 191 TNIFSYSIIIDSLCKEG--LVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVN 248
           ++I  ++ I+ SL K        A  L   ++  GI P +     LI+ +C         
Sbjct: 64  SSIIEFNKILGSLVKSNNNHYPTAISLSRRLEFHGITPDIFTFNILINCYCHMAEMNFAF 123

Query: 249 GLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGY 308
            +  ++L +G  P+ +TFN +I  LC  GK+ EA    + ++  G + D+F+Y +L++G 
Sbjct: 124 SMMAKILKMGYEPDTITFNTLIKGLCLNGKVKEALHFHDHVLALGFHLDQFSYGTLINGL 183

Query: 309 CLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTV 368
           C +G   TA ++   +  K  K  VV YN +I+  CK   V +A  LY Q+I+  +   V
Sbjct: 184 CKIGETRTALQMLRKIDGKLVKINVVMYNTIIDSLCKHKLVIDAYELYSQMIAKKISPDV 243

Query: 369 ITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHM 428
           +T++ L+ G    GQ   A  LF EM L N+ PD  T+NIL+D LCK   ++ A  +  +
Sbjct: 244 VTFSALIYGFCIVGQLEEAFGLFREMVLKNINPDYYTFNILVDALCKEGNLKGAKNMLVV 303

Query: 429 LEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGK 488
           +        +  ++ L+DG C   +++ A  + + + Q G  P   +Y  MI+G C+   
Sbjct: 304 MMKEGVMPNVVTYSSLMDGYCLVNQVNKAKHVLNTISQMGAAPNAHSYCTMINGFCKIKM 363

Query: 489 LEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDT-T 547
           +++A      M+  G AP+ VT+N+L+ G  ++ + S   EL+ +M +   N  P +  T
Sbjct: 364 VDEALSLFNDMQFKGIAPDKVTYNSLIDGLCKSGRISYAWELVDEMHD---NGQPANIFT 420

Query: 548 FSIVVDLLAKDEKYHECSAVSK 569
           ++ ++D L K+    +  A+ K
Sbjct: 421 YNCLIDALCKNHHVDQAIALVK 442


>gi|356532716|ref|XP_003534917.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 527

 Score =  340 bits (871), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 180/497 (36%), Positives = 277/497 (55%), Gaps = 34/497 (6%)

Query: 66  MTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCF----- 120
           M  ++ +PPI  FN + G++ K +HY   IS ++++   G+ PD  TLNILINCF     
Sbjct: 1   MLLVRDTPPIMEFNKIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQ 60

Query: 121 -----------------------GNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGT 157
                                      +GLC++  +K++      ++A G + D ++Y T
Sbjct: 61  MTFSFTVLGKILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYAT 120

Query: 158 LINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFL 217
           L+NG C+ G    AL+L + +          ++ N+  Y+ IID LCK+ LV++A +L+ 
Sbjct: 121 LLNGLCKIGETRSALKLLRMIEDRS------TRPNVVMYNTIIDGLCKDKLVNEAYDLYS 174

Query: 218 EMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGG 277
           EM  RGI P V+  +TLI+GFC AG   E  GL  EM+     PN+ T+ +++D LCK G
Sbjct: 175 EMDARGIFPNVITYSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEG 234

Query: 278 KINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYN 337
           K+ EA  LL +M + G+ P+  +YN+LMDGYCL+G +  A+++F +M  KG    V SYN
Sbjct: 235 KVKEAKNLLAVMTKEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYN 294

Query: 338 ILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLY 397
           I+I+  CK   V+EAM+L R+++   +    +TY++L+ G  + G+   A  L  EM   
Sbjct: 295 IMIDRLCKSKRVDEAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEMYHR 354

Query: 398 NVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNA 457
               D+ TY  L+D LCKN  + +A  LF  ++    +     +  LIDGLCK GR  NA
Sbjct: 355 GQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPNKYTYTALIDGLCKGGRHKNA 414

Query: 458 WELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHG 517
            +LF  L  KG    V TY++MI GLC++G L++A      ME+NGC P+ VTF  ++  
Sbjct: 415 QKLFQHLLVKGCRINVWTYNVMISGLCKEGMLDEALAMKSKMEENGCIPDAVTFEIIIRS 474

Query: 518 FLQNNKTSKVVELLHKM 534
             + ++  K  +LLH+M
Sbjct: 475 LFEKDQNDKAEKLLHEM 491



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 118/375 (31%), Positives = 206/375 (54%), Gaps = 2/375 (0%)

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
           I  ++ I+ SL K      A  LF +M+ +GI P +     LI+ FC  G       +  
Sbjct: 10  IMEFNKIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTFSFTVLG 69

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
           ++L LG +PN +T N ++  LC  G++ ++    + ++ +G   D+ +Y +L++G C +G
Sbjct: 70  KILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLCKIG 129

Query: 313 RIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYN 372
              +A ++   +  +  +  VV YN +I+G CK   V EA  LY ++ + G+   VITY+
Sbjct: 130 ETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVITYS 189

Query: 373 TLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMN 432
           TL+ G   AGQ   A  L +EM L N+ P++ TY IL+D LCK   V+EA  L  ++   
Sbjct: 190 TLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVMTKE 249

Query: 433 KFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKA 492
             +  +  +N L+DG C  G + NA ++FH + QKG+ P V +Y+IMI  LC+  ++++A
Sbjct: 250 GVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVDEA 309

Query: 493 NDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVV 552
            + L  +      PN VT+++L+ GF +  + +  ++LL +M    R    D  T++ ++
Sbjct: 310 MNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEMY--HRGQPADVVTYTSLL 367

Query: 553 DLLAKDEKYHECSAV 567
           D L K++   + +A+
Sbjct: 368 DALCKNQNLDKATAL 382



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 87/279 (31%), Positives = 136/279 (48%), Gaps = 15/279 (5%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CK G   + EA+     MT     P + S+N L                +  +V  G+ P
Sbjct: 231 CKEG--KVKEAKNLLAVMTKEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNP 288

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           +  + NI+I+        LC   R+ EA  L + ++   + P+ +TY +LI+GFC+ G +
Sbjct: 289 NVYSYNIMID-------RLCKSKRVDEAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRI 341

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
           + AL L K+M    Y  G     ++ +Y+ ++D+LCK   +DKA  LF++MK RGI P  
Sbjct: 342 TSALDLLKEM----YHRG--QPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPNK 395

Query: 229 VVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLEL 288
              T LI G C  G  +    LF  +L  G R N+ T+NVMI  LCK G ++EA  +   
Sbjct: 396 YTYTALIDGLCKGGRHKNAQKLFQHLLVKGCRINVWTYNVMISGLCKEGMLDEALAMKSK 455

Query: 289 MIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSK 327
           M + G  PD  T+  ++       + D A ++   M +K
Sbjct: 456 MEENGCIPDAVTFEIIIRSLFEKDQNDKAEKLLHEMIAK 494



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 83/307 (27%), Positives = 145/307 (47%), Gaps = 26/307 (8%)

Query: 63  FGYMTHM---QPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINC 119
           FG +  M     +P + ++ +L  A+ K        +    +   G+ P+ ++ N L++ 
Sbjct: 205 FGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVMTKEGVKPNVVSYNTLMD- 263

Query: 120 FGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRL----- 174
                 G C+   ++ A  +F  M+  GV P+V +Y  +I+  C++  +  A+ L     
Sbjct: 264 ------GYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVDEAMNLLREVL 317

Query: 175 HKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTL 234
           HK MV            N  +YS +ID  CK G +  A +L  EM  RG    VV  T+L
Sbjct: 318 HKNMVP-----------NTVTYSSLIDGFCKLGRITSALDLLKEMYHRGQPADVVTYTSL 366

Query: 235 IHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGL 294
           +   C   N ++   LF++M + G +PN  T+  +ID LCKGG+   A  L + ++ +G 
Sbjct: 367 LDALCKNQNLDKATALFMKMKERGIQPNKYTYTALIDGLCKGGRHKNAQKLFQHLLVKGC 426

Query: 295 NPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMS 354
             + +TYN ++ G C  G +D A  +   M   GC    V++ I+I    +    ++A  
Sbjct: 427 RINVWTYNVMISGLCKEGMLDEALAMKSKMEENGCIPDAVTFEIIIRSLFEKDQNDKAEK 486

Query: 355 LYRQIIS 361
           L  ++I+
Sbjct: 487 LLHEMIA 493



 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 67/236 (28%), Positives = 116/236 (49%), Gaps = 13/236 (5%)

Query: 59  ARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILIN 118
           A+  F  M     +P + S+N++   + K++  D  ++  R+++   ++P+ +T + LI+
Sbjct: 274 AKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVDEAMNLLREVLHKNMVPNTVTYSSLID 333

Query: 119 CFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKM 178
                  G C   RI  A  L K M   G   DV+TY +L++  C+  NL  A  L  KM
Sbjct: 334 -------GFCKLGRITSALDLLKEMYHRGQPADVVTYTSLLDALCKNQNLDKATALFMKM 386

Query: 179 VSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGF 238
                E G+  + N ++Y+ +ID LCK G    A++LF  +  +G    V     +I G 
Sbjct: 387 ----KERGI--QPNKYTYTALIDGLCKGGRHKNAQKLFQHLLVKGCRINVWTYNVMISGL 440

Query: 239 CCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGL 294
           C  G  +E   +  +M + G  P+ +TF ++I  L +  + ++A  LL  MI + L
Sbjct: 441 CKEGMLDEALAMKSKMEENGCIPDAVTFEIIIRSLFEKDQNDKAEKLLHEMIAKDL 496


>gi|255570422|ref|XP_002526170.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223534547|gb|EEF36246.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 504

 Score =  339 bits (870), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 182/494 (36%), Positives = 285/494 (57%), Gaps = 50/494 (10%)

Query: 105 GLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCR 164
           G  P+ +T++ L+       +G+C E ++ +A  LF  M   G + D++ YG LIN   +
Sbjct: 4   GYQPNLVTVSTLV-------KGMCFEGKVMDALELFDKMTRSGFQGDILLYGYLINALRK 56

Query: 165 TGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGI 224
           T     A+ LH++M+S       I   N F+Y ++IDSLCK+GL  K  ++F EM   GI
Sbjct: 57  TRQARRAVELHRRMLSE------ICSGNFFTYGLVIDSLCKDGLAIKGLKMFREMINMGI 110

Query: 225 NPAVVVCTTLIHGFCCAGN-----------------------------------WEEVNG 249
            P V+V ++LI+G C  G                                    W+E   
Sbjct: 111 CPNVIVYSSLINGLCRVGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATR 170

Query: 250 LFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYC 309
            F +M+  G  P+++TF  +ID L K GK+ EA  + ELMI++G  P+  TYNSL++G C
Sbjct: 171 TFSQMVGEGILPDVVTFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLC 230

Query: 310 LVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVI 369
           L  ++D A  +F  M  +G K  V+SYN LINGYC     EEAM+L+R++    +  ++ 
Sbjct: 231 LHHQMDHAVRLFEVMVERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEELTPSIT 290

Query: 370 TYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHML 429
           TY  LL  L+Q G+   A++LF+ M++    P L TY +L+DGLCKN C++EA+ +F  L
Sbjct: 291 TYTILLKALYQNGRIRTAKELFNNMQICGQSPSLDTYTVLLDGLCKNGCIEEAIDVFRSL 350

Query: 430 EMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKL 489
           +  K++  I I++ LI G+ +A R ++A E+F ++P  GLVP +VTY+IMI+GLC++GKL
Sbjct: 351 KSIKYKPSIRIYSILIGGMFQARRWESAMEIFDEIPTVGLVPNIVTYNIMINGLCKEGKL 410

Query: 490 EKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFS 549
            +A    + ME++GC  + ++FN ++ GFLQ N+  K +E L +M   E+N  P+D+   
Sbjct: 411 LEAERLFVQMEESGCEQDEISFNFIIRGFLQENQVQKAMEFLKRMR--EKNFSPNDSVTL 468

Query: 550 IVVDLLAKDEKYHE 563
           ++V+L A D +  E
Sbjct: 469 MLVNLYAADAQSSE 482



 Score =  132 bits (331), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 88/336 (26%), Positives = 150/336 (44%), Gaps = 59/336 (17%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           C+ G   L EA   F  M        + ++N L  A  +   +      + ++V  G+LP
Sbjct: 125 CRVG--KLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGILP 182

Query: 109 DFLTLNILINCFGNKER----------------------------GLCVENRIKEATWLF 140
           D +T   LI+    K +                            GLC+ +++  A  LF
Sbjct: 183 DVVTFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVRLF 242

Query: 141 KNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKM---------------VSGDYEN 185
           + M+  G++ DVI+Y TLING+C +G    A+ L +KM               +   Y+N
Sbjct: 243 EVMVERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEELTPSITTYTILLKALYQN 302

Query: 186 GLISKT--------------NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVC 231
           G I                 ++ +Y++++D LCK G +++A ++F  +K     P++ + 
Sbjct: 303 GRIRTAKELFNNMQICGQSPSLDTYTVLLDGLCKNGCIEEAIDVFRSLKSIKYKPSIRIY 362

Query: 232 TTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQ 291
           + LI G   A  WE    +F E+  +G  PN++T+N+MI+ LCK GK+ EA  L   M +
Sbjct: 363 SILIGGMFQARRWESAMEIFDEIPTVGLVPNIVTYNIMINGLCKEGKLLEAERLFVQMEE 422

Query: 292 RGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSK 327
            G   D  ++N ++ G+    ++  A E    M  K
Sbjct: 423 SGCEQDEISFNFIIRGFLQENQVQKAMEFLKRMREK 458



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 77/264 (29%), Positives = 138/264 (52%), Gaps = 2/264 (0%)

Query: 290 IQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNV 349
           ++ G  P+  T ++L+ G C  G++  A E+F  M   G +  ++ Y  LIN   K    
Sbjct: 1   MKSGYQPNLVTVSTLVKGMCFEGKVMDALELFDKMTRSGFQGDILLYGYLINALRKTRQA 60

Query: 350 EEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNIL 409
             A+ L+R+++S        TY  ++  L + G A    K+F EM    + P++  Y+ L
Sbjct: 61  RRAVELHRRMLSEICSGNFFTYGLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSL 120

Query: 410 IDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGL 469
           I+GLC+   ++EAV LF  +     +  +  +N LI   C+ G    A   F ++  +G+
Sbjct: 121 INGLCRVGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGI 180

Query: 470 VPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVE 529
           +P VVT++ +I  L +KGK+++A      M K G APN+VT+N+L++G   +++    V 
Sbjct: 181 LPDVVTFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVR 240

Query: 530 LLHKMAEPERNLVPDDTTFSIVVD 553
           L   M   ER +  D  +++ +++
Sbjct: 241 LFEVMV--ERGIKIDVISYNTLIN 262



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/191 (25%), Positives = 89/191 (46%), Gaps = 20/191 (10%)

Query: 4   RTQFRCLFSSETVSKVKLSSLFKSPR-----------QIAAVSSPETQLNEFLHENCKSG 52
           + Q+  L  S T   + L +L+++ R           QI   S         L   CK+G
Sbjct: 279 KMQYEELTPSITTYTILLKALYQNGRIRTAKELFNNMQICGQSPSLDTYTVLLDGLCKNG 338

Query: 53  IINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLT 112
            I   EA   F  +  ++  P I  +++L G + + R +++ +  + ++ ++GL+P+ +T
Sbjct: 339 CIE--EAIDVFRSLKSIKYKPSIRIYSILIGGMFQARRWESAMEIFDEIPTVGLVPNIVT 396

Query: 113 LNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVAL 172
            NI+IN       GLC E ++ EA  LF  M   G   D I++  +I GF +   +  A+
Sbjct: 397 YNIMIN-------GLCKEGKLLEAERLFVQMEESGCEQDEISFNFIIRGFLQENQVQKAM 449

Query: 173 RLHKKMVSGDY 183
              K+M   ++
Sbjct: 450 EFLKRMREKNF 460


>gi|356551942|ref|XP_003544331.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Glycine max]
          Length = 545

 Score =  338 bits (868), Expect = 4e-90,   Method: Compositional matrix adjust.
 Identities = 184/508 (36%), Positives = 279/508 (54%), Gaps = 34/508 (6%)

Query: 55  NLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLN 114
           N ++A   F +M H+ P+P    FN +  ++   + Y   IS Y+++    + PD+ TLN
Sbjct: 38  NADDAVSQFNHMFHVHPTPHTFHFNKILISLVNVKRYPTAISLYKQMELSEVEPDYFTLN 97

Query: 115 ILINCF----------------------------GNKERGLCVENRIKEATWLFKNMIAF 146
           I+INCF                                +GLC+E ++KEA      ++A 
Sbjct: 98  IIINCFCHFGQVVLAFSGVSKILKLGYQPNTITLNTLMKGLCLEGKVKEALRFHDKVLAQ 157

Query: 147 GVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKE 206
           G R   I+YG LING C+ G    A+RL +++     E   I + N+  YS+IID LCK+
Sbjct: 158 GFRLSGISYGILINGVCKIGETRAAIRLLRRI-----ERWSI-RPNVVIYSMIIDRLCKD 211

Query: 207 GLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTF 266
            LVD+A +L+ EM G+GI+P VV  + L+ GFC  G       L  EM+     P++ T+
Sbjct: 212 TLVDEAYDLYTEMVGKGISPDVVTYSILVSGFCIVGQLNRAIDLLNEMVLENINPDIYTY 271

Query: 267 NVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHS 326
            +++D LCK GK+ EA  +L +M++  +N D   Y++LMDGYCLV  ++ A+ +F +M  
Sbjct: 272 TILVDALCKEGKVKEAENVLAVMVKACVNLDVVVYSTLMDGYCLVNEVNNAKRVFYTMTQ 331

Query: 327 KGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGY 386
            G    V  Y+I+ING CKI  V+EA++L+ +I    +    +TY +L+  L ++G+  Y
Sbjct: 332 MGVTPDVHCYSIMINGLCKIKRVDEALNLFEEIHQKNMVPDTVTYTSLIDCLCKSGRISY 391

Query: 387 AQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLID 446
              LFDEM      PD+ TYN LID LCKN  +  A+ LF+ ++       +  F  L+D
Sbjct: 392 VWDLFDEMLDRGQPPDVITYNNLIDALCKNGHLDRAIALFNKMKDQAIRPNVYTFTILLD 451

Query: 447 GLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAP 506
           GLCK GRL NA E F  L  KG    V TY++MI+GLC++G L++A      ME NGC  
Sbjct: 452 GLCKVGRLKNALEFFQDLLTKGYCLNVRTYTVMINGLCKEGLLDEALALQSRMEDNGCIS 511

Query: 507 NVVTFNTLMHGFLQNNKTSKVVELLHKM 534
           + VTF  ++  F   ++  K  +L+ +M
Sbjct: 512 DAVTFEIMIRAFFDKDENDKAEKLVREM 539



 Score =  195 bits (495), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 119/394 (30%), Positives = 205/394 (52%), Gaps = 13/394 (3%)

Query: 77  SFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEA 136
           S+ +L   V K     A I   R++    + P+ +  +++I+        LC +  + EA
Sbjct: 165 SYGILINGVCKIGETRAAIRLLRRIERWSIRPNVVIYSMIID-------RLCKDTLVDEA 217

Query: 137 TWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSY 196
             L+  M+  G+ PDV+TY  L++GFC  G L+ A+ L  +MV    EN      +I++Y
Sbjct: 218 YDLYTEMVGKGISPDVVTYSILVSGFCIVGQLNRAIDLLNEMV---LEN---INPDIYTY 271

Query: 197 SIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLD 256
           +I++D+LCKEG V +A+ +   M    +N  VVV +TL+ G+C          +F  M  
Sbjct: 272 TILVDALCKEGKVKEAENVLAVMVKACVNLDVVVYSTLMDGYCLVNEVNNAKRVFYTMTQ 331

Query: 257 LGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDT 316
           +G  P++  +++MI+ LCK  +++EA  L E + Q+ + PD  TY SL+D  C  GRI  
Sbjct: 332 MGVTPDVHCYSIMINGLCKIKRVDEALNLFEEIHQKNMVPDTVTYTSLIDCLCKSGRISY 391

Query: 317 AREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLS 376
             ++F  M  +G    V++YN LI+  CK  +++ A++L+ ++    +R  V T+  LL 
Sbjct: 392 VWDLFDEMLDRGQPPDVITYNNLIDALCKNGHLDRAIALFNKMKDQAIRPNVYTFTILLD 451

Query: 377 GLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEF 436
           GL + G+   A + F ++       ++ TY ++I+GLCK   + EA+ L   +E N    
Sbjct: 452 GLCKVGRLKNALEFFQDLLTKGYCLNVRTYTVMINGLCKEGLLDEALALQSRMEDNGCIS 511

Query: 437 GIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLV 470
               F  +I         D A +L  ++  +GL+
Sbjct: 512 DAVTFEIMIRAFFDKDENDKAEKLVREMIARGLL 545



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 106/365 (29%), Positives = 188/365 (51%), Gaps = 2/365 (0%)

Query: 194 FSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIE 253
           F ++ I+ SL        A  L+ +M+   + P       +I+ FC  G          +
Sbjct: 59  FHFNKILISLVNVKRYPTAISLYKQMELSEVEPDYFTLNIIINCFCHFGQVVLAFSGVSK 118

Query: 254 MLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGR 313
           +L LG +PN +T N ++  LC  GK+ EA    + ++ +G      +Y  L++G C +G 
Sbjct: 119 ILKLGYQPNTITLNTLMKGLCLEGKVKEALRFHDKVLAQGFRLSGISYGILINGVCKIGE 178

Query: 314 IDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNT 373
              A  +   +     +  VV Y+++I+  CK   V+EA  LY +++  G+   V+TY+ 
Sbjct: 179 TRAAIRLLRRIERWSIRPNVVIYSMIIDRLCKDTLVDEAYDLYTEMVGKGISPDVVTYSI 238

Query: 374 LLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNK 433
           L+SG    GQ   A  L +EM L N+ PD+ TY IL+D LCK   V+EA  +  ++    
Sbjct: 239 LVSGFCIVGQLNRAIDLLNEMVLENINPDIYTYTILVDALCKEGKVKEAENVLAVMVKAC 298

Query: 434 FEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKAN 493
               + +++ L+DG C    ++NA  +F+ + Q G+ P V  YSIMI+GLC+  ++++A 
Sbjct: 299 VNLDVVVYSTLMDGYCLVNEVNNAKRVFYTMTQMGVTPDVHCYSIMINGLCKIKRVDEAL 358

Query: 494 DFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
           +    + +    P+ VT+ +L+    ++ + S V +L  +M   +R   PD  T++ ++D
Sbjct: 359 NLFEEIHQKNMVPDTVTYTSLIDCLCKSGRISYVWDLFDEML--DRGQPPDVITYNNLID 416

Query: 554 LLAKD 558
            L K+
Sbjct: 417 ALCKN 421



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 111/423 (26%), Positives = 205/423 (48%), Gaps = 8/423 (1%)

Query: 135 EATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIF 194
           +A   F +M      P    +  ++           A+ L+K+M   + E       + F
Sbjct: 41  DAVSQFNHMFHVHPTPHTFHFNKILISLVNVKRYPTAISLYKQMELSEVE------PDYF 94

Query: 195 SYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEM 254
           + +III+  C  G V  A     ++   G  P  +   TL+ G C  G  +E      ++
Sbjct: 95  TLNIIINCFCHFGQVVLAFSGVSKILKLGYQPNTITLNTLMKGLCLEGKVKEALRFHDKV 154

Query: 255 LDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRI 314
           L  G R + +++ ++I+ +CK G+   A  LL  + +  + P+   Y+ ++D  C    +
Sbjct: 155 LAQGFRLSGISYGILINGVCKIGETRAAIRLLRRIERWSIRPNVVIYSMIIDRLCKDTLV 214

Query: 315 DTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTL 374
           D A +++  M  KG    VV+Y+IL++G+C +  +  A+ L  +++   +   + TY  L
Sbjct: 215 DEAYDLYTEMVGKGISPDVVTYSILVSGFCIVGQLNRAIDLLNEMVLENINPDIYTYTIL 274

Query: 375 LSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKF 434
           +  L + G+   A+ +   M    V  D+  Y+ L+DG C  N V  A ++F+ +     
Sbjct: 275 VDALCKEGKVKEAENVLAVMVKACVNLDVVVYSTLMDGYCLVNEVNNAKRVFYTMTQMGV 334

Query: 435 EFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKAND 494
              +  ++ +I+GLCK  R+D A  LF ++ QK +VP  VTY+ +I  LC+ G++    D
Sbjct: 335 TPDVHCYSIMINGLCKIKRVDEALNLFEEIHQKNMVPDTVTYTSLIDCLCKSGRISYVWD 394

Query: 495 FLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDL 554
               M   G  P+V+T+N L+    +N    + + L +KM   ++ + P+  TF+I++D 
Sbjct: 395 LFDEMLDRGQPPDVITYNNLIDALCKNGHLDRAIALFNKMK--DQAIRPNVYTFTILLDG 452

Query: 555 LAK 557
           L K
Sbjct: 453 LCK 455



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 81/321 (25%), Positives = 167/321 (52%), Gaps = 2/321 (0%)

Query: 243 NWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYN 302
           N ++    F  M  + P P+   FN ++  L    +   A  L + M    + PD FT N
Sbjct: 38  NADDAVSQFNHMFHVHPTPHTFHFNKILISLVNVKRYPTAISLYKQMELSEVEPDYFTLN 97

Query: 303 SLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISN 362
            +++ +C  G++  A      +   G +   ++ N L+ G C    V+EA+  + ++++ 
Sbjct: 98  IIINCFCHFGQVVLAFSGVSKILKLGYQPNTITLNTLMKGLCLEGKVKEALRFHDKVLAQ 157

Query: 363 GVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEA 422
           G R + I+Y  L++G+ + G+   A +L   ++ +++ P++  Y+++ID LCK+  V EA
Sbjct: 158 GFRLSGISYGILINGVCKIGETRAAIRLLRRIERWSIRPNVVIYSMIIDRLCKDTLVDEA 217

Query: 423 VKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHG 482
             L+  +        +  ++ L+ G C  G+L+ A +L +++  + + P + TY+I++  
Sbjct: 218 YDLYTEMVGKGISPDVVTYSILVSGFCIVGQLNRAIDLLNEMVLENINPDIYTYTILVDA 277

Query: 483 LCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLV 542
           LC++GK+++A + L  M K     +VV ++TLM G+   N+ +    + + M   +  + 
Sbjct: 278 LCKEGKVKEAENVLAVMVKACVNLDVVVYSTLMDGYCLVNEVNNAKRVFYTMT--QMGVT 335

Query: 543 PDDTTFSIVVDLLAKDEKYHE 563
           PD   +SI+++ L K ++  E
Sbjct: 336 PDVHCYSIMINGLCKIKRVDE 356



 Score =  106 bits (264), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 76/265 (28%), Positives = 131/265 (49%), Gaps = 9/265 (3%)

Query: 325 HSKGCKHTVVSYNILINGYCKILNVEE---AMSLYRQIISNGVRQTVITYNTLLSGLFQA 381
           H     HT     ILI+    ++NV+    A+SLY+Q+  + V     T N +++     
Sbjct: 51  HVHPTPHTFHFNKILIS----LVNVKRYPTAISLYKQMELSEVEPDYFTLNIIINCFCHF 106

Query: 382 GQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIF 441
           GQ   A     ++     +P+  T N L+ GLC    V+EA++    +    F      +
Sbjct: 107 GQVVLAFSGVSKILKLGYQPNTITLNTLMKGLCLEGKVKEALRFHDKVLAQGFRLSGISY 166

Query: 442 NCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEK 501
             LI+G+CK G    A  L  ++ +  + P VV YS++I  LC+   +++A D    M  
Sbjct: 167 GILINGVCKIGETRAAIRLLRRIERWSIRPNVVIYSMIIDRLCKDTLVDEAYDLYTEMVG 226

Query: 502 NGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKY 561
            G +P+VVT++ L+ GF    + ++ ++LL++M     N+ PD  T++I+VD L K+ K 
Sbjct: 227 KGISPDVVTYSILVSGFCIVGQLNRAIDLLNEMVL--ENINPDIYTYTILVDALCKEGKV 284

Query: 562 HECSAVSKSSYRACLYVTIFQPSSL 586
            E   V     +AC+ + +   S+L
Sbjct: 285 KEAENVLAVMVKACVNLDVVVYSTL 309


>gi|356529495|ref|XP_003533326.1| PREDICTED: uncharacterized protein LOC100779660 [Glycine max]
          Length = 1205

 Score =  335 bits (858), Expect = 5e-89,   Method: Compositional matrix adjust.
 Identities = 188/512 (36%), Positives = 289/512 (56%), Gaps = 34/512 (6%)

Query: 53  IINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLT 112
           I N+++A   F  M  M+ +PPI  FN +  + AK +HY   +S   +L   G+ PD +T
Sbjct: 37  IQNVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLIT 96

Query: 113 LNILINCFGNKE----------------------------RGLCVENRIKEATWLFKNMI 144
           LNILINCF +                              +GLC++ ++K+A      ++
Sbjct: 97  LNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLL 156

Query: 145 AFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLC 204
           A G + + ++YGTLING C+ G+   A++L +K+      +G ++K N+  YS IID+LC
Sbjct: 157 AQGFQLNQVSYGTLINGVCKIGDTRAAIKLLQKI------DGRLTKPNVVMYSTIIDALC 210

Query: 205 KEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLL 264
           K  LV +A  LF EM  +GI+  VV  +TLI+GFC  G  +E  GL  EM+     PN+ 
Sbjct: 211 KYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVY 270

Query: 265 TFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSM 324
           T+N+++D LCK GK+ EA  +L +M++  + PD  TY++LMDGY LV  +  A+ +F +M
Sbjct: 271 TYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAM 330

Query: 325 HSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQA 384
              G    V +Y ILING+CK   V+EA++L++++    +   ++TY++L+ GL ++G+ 
Sbjct: 331 SLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRI 390

Query: 385 GYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCL 444
            Y   L DEM       ++ TY+ LIDGLCKN  +  A+ LF+ ++          F  L
Sbjct: 391 PYVWDLIDEMHDRGQPANVITYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPNTFTFTIL 450

Query: 445 IDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGC 504
           +DGLCK GRL +A E+F  L  KG    V TY++MI G C++G LE+A   L  ME NGC
Sbjct: 451 LDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMIDGHCKQGLLEEALTMLSKMEDNGC 510

Query: 505 APNVVTFNTLMHGFLQNNKTSKVVELLHKMAE 536
            P+ VTF  ++    + ++    V    K+ E
Sbjct: 511 IPDAVTFEIIIIALFKKDENGGNVGFDKKVWE 542



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 99/349 (28%), Positives = 174/349 (49%), Gaps = 2/349 (0%)

Query: 209 VDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNV 268
           VD A   F  M      P ++    ++  F    ++     L   +   G +P+L+T N+
Sbjct: 40  VDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNI 99

Query: 269 MIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKG 328
           +I+C C  G+I     +L  +++RG  PD  T N+L+ G CL G++  A      + ++G
Sbjct: 100 LINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQG 159

Query: 329 CKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQ 388
            +   VSY  LING CKI +   A+ L ++I     +  V+ Y+T++  L +      A 
Sbjct: 160 FQLNQVSYGTLINGVCKIGDTRAAIKLLQKIDGRLTKPNVVMYSTIIDALCKYQLVSEAY 219

Query: 389 KLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGL 448
            LF EM +  +  D+ TY+ LI G C    ++EA+ L + + +      +  +N L+D L
Sbjct: 220 GLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDAL 279

Query: 449 CKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNV 508
           CK G++  A  +   + +  + P V+TYS ++ G     +++KA      M   G  P+V
Sbjct: 280 CKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDV 339

Query: 509 VTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAK 557
            T+  L++GF +N    + + L  +M +  +N+VP   T+S ++D L K
Sbjct: 340 HTYTILINGFCKNKMVDEALNLFKEMHQ--KNMVPGIVTYSSLIDGLCK 386



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 78/245 (31%), Positives = 134/245 (54%), Gaps = 2/245 (0%)

Query: 292  RGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEE 351
            +G+ PD FT N L++ +C +G+I     I   +  +G     +++  LING C    V +
Sbjct: 955  KGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLINGLCLKGQVNK 1014

Query: 352  AMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILID 411
            A+  + ++++ G +   ++Y TL++G+ + G    A KL  ++     +PD+  YN +ID
Sbjct: 1015 ALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKPDVVMYNTIID 1074

Query: 412  GLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVP 471
             LCK+  V +A  LF  + +      +  +N LI G C  G+L  A  L +K+  K + P
Sbjct: 1075 ALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNKMVLKTINP 1134

Query: 472  TVVTYSIMIHGLCRKGK--LEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVE 529
             V TY+I++  LC++GK  L+++   L  ME NGC  N VTF  ++    + ++  KV +
Sbjct: 1135 NVRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEIIISALFEKDENDKVEK 1194

Query: 530  LLHKM 534
            LLH+M
Sbjct: 1195 LLHEM 1199



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 79/248 (31%), Positives = 129/248 (52%), Gaps = 2/248 (0%)

Query: 258  GPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTA 317
            G +P+L T N++I+C C  G+I     +L  +++RG +PD  T+ +L++G CL G+++ A
Sbjct: 956  GIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLINGLCLKGQVNKA 1015

Query: 318  REIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSG 377
                  + ++G +   VSY  LING CKI +   A+ L R+I     +  V+ YNT++  
Sbjct: 1016 LHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKPDVVMYNTIIDA 1075

Query: 378  LFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFG 437
            L +      A  LF EM +  +  D+ TYN LI G C    ++EA+ L + + +      
Sbjct: 1076 LCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNKMVLKTINPN 1135

Query: 438  IEIFNCLIDGLCKAGR--LDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDF 495
            +  +N L+D LCK G+  LD +  +  K+   G     VT+ I+I  L  K + +K    
Sbjct: 1136 VRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEIIISALFEKDENDKVEKL 1195

Query: 496  LLYMEKNG 503
            L  M   G
Sbjct: 1196 LHEMIARG 1203



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 84/270 (31%), Positives = 137/270 (50%), Gaps = 36/270 (13%)

Query: 89   RHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKER----------------------- 125
            +HY   +S   +L   G+ PD  TLNILINCF +  +                       
Sbjct: 940  KHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITF 999

Query: 126  -----GLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVS 180
                 GLC++ ++ +A      ++A G + + ++YGTLING C+ G+   A++L +K+  
Sbjct: 1000 TTLINGLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKI-- 1057

Query: 181  GDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCC 240
                +G ++K ++  Y+ IID+LCK  LV KA  LF EM  +GI+  VV   TLI+GFC 
Sbjct: 1058 ----DGRLTKPDVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCI 1113

Query: 241  AGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGK--INEANGLLELMIQRGLNPDR 298
             G  +E  GL  +M+     PN+ T+N+++D LCK GK  ++E+  +L  M   G   + 
Sbjct: 1114 VGKLKEAIGLLNKMVLKTINPNVRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANA 1173

Query: 299  FTYNSLMDGYCLVGRIDTAREIFLSMHSKG 328
             T+  ++         D   ++   M ++G
Sbjct: 1174 VTFEIIISALFEKDENDKVEKLLHEMIARG 1203



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 74/256 (28%), Positives = 132/256 (51%), Gaps = 4/256 (1%)

Query: 217  LEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKG 276
            LE+KG  I P +     LI+ FC  G       +  ++L  G  P+ +TF  +I+ LC  
Sbjct: 952  LELKG--IQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLINGLCLK 1009

Query: 277  GKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSY 336
            G++N+A    + ++ +G   ++ +Y +L++G C +G    A ++   +  +  K  VV Y
Sbjct: 1010 GQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKPDVVMY 1069

Query: 337  NILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKL 396
            N +I+  CK   V +A  L+ ++   G+   V+TYNTL+ G    G+   A  L ++M L
Sbjct: 1070 NTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNKMVL 1129

Query: 397  YNVEPDLSTYNILIDGLCK--NNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRL 454
              + P++ TYNIL+D LCK   + + E++ +   +E N  +     F  +I  L +    
Sbjct: 1130 KTINPNVRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEIIISALFEKDEN 1189

Query: 455  DNAWELFHKLPQKGLV 470
            D   +L H++  +GL+
Sbjct: 1190 DKVEKLLHEMIARGLL 1205



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 73/259 (28%), Positives = 129/259 (49%), Gaps = 4/259 (1%)

Query: 330 KHT--VVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYA 387
           +HT  ++ +N +++ + K+ +   A+SL  ++   G++  +IT N L++     GQ  + 
Sbjct: 54  RHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFG 113

Query: 388 QKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDG 447
             +  ++      PD  T N LI GLC    V++A+     L    F+     +  LI+G
Sbjct: 114 FSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYGTLING 173

Query: 448 LCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPN 507
           +CK G    A +L  K+  +   P VV YS +I  LC+   + +A      M   G + +
Sbjct: 174 VCKIGDTRAAIKLLQKIDGRLTKPNVVMYSTIIDALCKYQLVSEAYGLFSEMTVKGISAD 233

Query: 508 VVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAV 567
           VVT++TL++GF    K  + + LL++M     N  P+  T++I+VD L K+ K  E  +V
Sbjct: 234 VVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTIN--PNVYTYNILVDALCKEGKVKEAKSV 291

Query: 568 SKSSYRACLYVTIFQPSSL 586
                +AC+   +   S+L
Sbjct: 292 LAVMLKACVKPDVITYSTL 310



 Score =  105 bits (263), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 73/247 (29%), Positives = 123/247 (49%), Gaps = 5/247 (2%)

Query: 316  TAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLL 375
            TA  +   +  KG +  + + NILIN +C +  +    S+  +I+  G     IT+ TL+
Sbjct: 944  TAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLI 1003

Query: 376  SGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFE 435
            +GL   GQ   A    D++     + +  +Y  LI+G+CK    + A+KL   ++    +
Sbjct: 1004 NGLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTK 1063

Query: 436  FGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDF 495
              + ++N +ID LCK   +  A+ LF ++  KG+   VVTY+ +I+G C  GKL++A   
Sbjct: 1064 PDVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGL 1123

Query: 496  LLYMEKNGCAPNVVTFNTLMHGFLQNNKT--SKVVELLHKMAEPERNLVPDDTTFSIVVD 553
            L  M      PNV T+N L+    +  K    + + +L KM   +     +  TF I++ 
Sbjct: 1124 LNKMVLKTINPNVRTYNILVDALCKEGKDLLDESLSMLSKME--DNGCKANAVTFEIIIS 1181

Query: 554  -LLAKDE 559
             L  KDE
Sbjct: 1182 ALFEKDE 1188



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 64/242 (26%), Positives = 119/242 (49%), Gaps = 2/242 (0%)

Query: 190  KTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNG 249
            + ++F+ +I+I+  C  G +     +  ++  RG +P  +  TTLI+G C  G   +   
Sbjct: 958  QPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLINGLCLKGQVNKALH 1017

Query: 250  LFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYC 309
               ++L  G + N +++  +I+ +CK G    A  LL  +  R   PD   YN+++D  C
Sbjct: 1018 FHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKPDVVMYNTIIDALC 1077

Query: 310  LVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVI 369
                +  A  +F  M+ KG    VV+YN LI G+C +  ++EA+ L  +++   +   V 
Sbjct: 1078 KHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNKMVLKTINPNVR 1137

Query: 370  TYNTLLSGLFQAGQAGYAQKL--FDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFH 427
            TYN L+  L + G+    + L    +M+    + +  T+ I+I  L + +   +  KL H
Sbjct: 1138 TYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEIIISALFEKDENDKVEKLLH 1197

Query: 428  ML 429
             +
Sbjct: 1198 EM 1199



 Score = 62.4 bits (150), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 48/190 (25%), Positives = 87/190 (45%), Gaps = 18/190 (9%)

Query: 40   QLNEFLHENCKSGIINLNEARYFFGYMTHMQ---PSPPISSFNLLFGAVAKNRHYDAVIS 96
            QLN+  +    +G+  + + R     +  +      P +  +N +  A+ K++       
Sbjct: 1028 QLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKPDVVMYNTIIDALCKHQLVSKAYG 1087

Query: 97   FYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYG 156
             + ++   G+  D +T N LI        G C+  ++KEA  L   M+   + P+V TY 
Sbjct: 1088 LFFEMNVKGISADVVTYNTLI-------YGFCIVGKLKEAIGLLNKMVLKTINPNVRTYN 1140

Query: 157  TLINGFCRTGN--LSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKE 214
             L++  C+ G   L  +L +  KM     +NG   K N  ++ III +L ++   DK ++
Sbjct: 1141 ILVDALCKEGKDLLDESLSMLSKM----EDNG--CKANAVTFEIIISALFEKDENDKVEK 1194

Query: 215  LFLEMKGRGI 224
            L  EM  RG+
Sbjct: 1195 LLHEMIARGL 1204


>gi|357442837|ref|XP_003591696.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355480744|gb|AES61947.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 543

 Score =  335 bits (858), Expect = 5e-89,   Method: Compositional matrix adjust.
 Identities = 184/500 (36%), Positives = 286/500 (57%), Gaps = 49/500 (9%)

Query: 63  FGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCF-- 120
           F  M  + P+P +  F  +  ++ K +HY  VIS + +L   G+ P+ ++L+ILINC+  
Sbjct: 59  FHRMLLLNPAPSVIEFGKILSSLVKLKHYPTVISLFYQLEFNGIKPNIVSLSILINCYCH 118

Query: 121 -GNKE-------------------------RGLCVENRIKEATWLFKNMIAFGVRPDVIT 154
            G                            +G C+ +++KEA     +++A G   + ++
Sbjct: 119 LGQMRFAFSIFAKILKMGYHPNTITLTTLVKGFCLNHKVKEALHFHDHVLALGFHFNQVS 178

Query: 155 YGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKE 214
           YGTLING C+ G    AL++ +++     E  L+S T++  YS IID LCK+ LV+ A E
Sbjct: 179 YGTLINGLCKIGETRAALQMLRQI-----EGKLVS-TDVVMYSTIIDGLCKDKLVNDAYE 232

Query: 215 LFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLC 274
           L+ EM  + I+P VV   +LI+G+C  G ++E  GL  EM+     P++ TFN+++D LC
Sbjct: 233 LYSEMITKRISPTVVTLNSLIYGYCIVGQFKEAFGLLREMVLKNINPDVYTFNILVDALC 292

Query: 275 KGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVV 334
           K GKI EA   + +M++ G+ PD  TY+SLMDGYCLV  ++ A+ +              
Sbjct: 293 KEGKIKEAKSGIAVMMKEGVMPDVVTYSSLMDGYCLVNEVNKAKHV-------------- 338

Query: 335 SYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEM 394
            Y+I+ING+CKI  V++A+SL+ ++    +    +TYN+L+ GL ++G+  YA +L DEM
Sbjct: 339 -YSIVINGFCKIKMVDKALSLFYEMRCRRIAPDTVTYNSLIDGLCKSGRISYAWELVDEM 397

Query: 395 KLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRL 454
           +      D+ TYN LID LCKN+ V +A+ L   ++    +  +  +N LIDGLCK GRL
Sbjct: 398 RDSGQPADIITYNSLIDALCKNHHVDKAIALVKKIKDQGIQLDMYTYNILIDGLCKQGRL 457

Query: 455 DNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTL 514
            +A  +F  L  KG   TV TY+IMI+GLC +G L +A   L  ME NGC P+ VT  T+
Sbjct: 458 KDAQVIFQDLLIKGYNLTVWTYTIMINGLCLEGLLNEAETLLSKMEDNGCVPDAVTCETI 517

Query: 515 MHGFLQNNKTSKVVELLHKM 534
           +    +N+K  +  +LL +M
Sbjct: 518 IRALFENDKNERAEKLLREM 537



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 106/396 (26%), Positives = 199/396 (50%), Gaps = 22/396 (5%)

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
           ++  +  I+ SL K         LF +++  GI P +V  + LI+ +C  G       +F
Sbjct: 70  SVIEFGKILSSLVKLKHYPTVISLFYQLEFNGIKPNIVSLSILINCYCHLGQMRFAFSIF 129

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
            ++L +G  PN +T   ++   C   K+ EA    + ++  G + ++ +Y +L++G C +
Sbjct: 130 AKILKMGYHPNTITLTTLVKGFCLNHKVKEALHFHDHVLALGFHFNQVSYGTLINGLCKI 189

Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
           G    A ++   +  K     VV Y+ +I+G CK   V +A  LY ++I+  +  TV+T 
Sbjct: 190 GETRAALQMLRQIEGKLVSTDVVMYSTIIDGLCKDKLVNDAYELYSEMITKRISPTVVTL 249

Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEA--------- 422
           N+L+ G    GQ   A  L  EM L N+ PD+ T+NIL+D LCK   ++EA         
Sbjct: 250 NSLIYGYCIVGQFKEAFGLLREMVLKNINPDVYTFNILVDALCKEGKIKEAKSGIAVMMK 309

Query: 423 -------VKLFHMLE----MNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVP 471
                  V    +++    +N+      +++ +I+G CK   +D A  LF+++  + + P
Sbjct: 310 EGVMPDVVTYSSLMDGYCLVNEVNKAKHVYSIVINGFCKIKMVDKALSLFYEMRCRRIAP 369

Query: 472 TVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELL 531
             VTY+ +I GLC+ G++  A + +  M  +G   +++T+N+L+    +N+   K + L+
Sbjct: 370 DTVTYNSLIDGLCKSGRISYAWELVDEMRDSGQPADIITYNSLIDALCKNHHVDKAIALV 429

Query: 532 HKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAV 567
            K+ +    L  D  T++I++D L K  +  +   +
Sbjct: 430 KKIKDQGIQL--DMYTYNILIDGLCKQGRLKDAQVI 463



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 91/352 (25%), Positives = 166/352 (47%), Gaps = 25/352 (7%)

Query: 29  RQIAA--VSSPETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVA 86
           RQI    VS+     +  +   CK  ++N  +A   +  M   + SP + + N L     
Sbjct: 200 RQIEGKLVSTDVVMYSTIIDGLCKDKLVN--DAYELYSEMITKRISPTVVTLNSLIYGYC 257

Query: 87  KNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAF 146
               +       R++V   + PD  T NIL++        LC E +IKEA      M+  
Sbjct: 258 IVGQFKEAFGLLREMVLKNINPDVYTFNILVD-------ALCKEGKIKEAKSGIAVMMKE 310

Query: 147 GVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKT--------------N 192
           GV PDV+TY +L++G+C    ++ A  ++  +++G  +  ++ K               +
Sbjct: 311 GVMPDVVTYSSLMDGYCLVNEVNKAKHVYSIVINGFCKIKMVDKALSLFYEMRCRRIAPD 370

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
             +Y+ +ID LCK G +  A EL  EM+  G    ++   +LI   C   + ++   L  
Sbjct: 371 TVTYNSLIDGLCKSGRISYAWELVDEMRDSGQPADIITYNSLIDALCKNHHVDKAIALVK 430

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
           ++ D G + ++ T+N++ID LCK G++ +A  + + ++ +G N   +TY  +++G CL G
Sbjct: 431 KIKDQGIQLDMYTYNILIDGLCKQGRLKDAQVIFQDLLIKGYNLTVWTYTIMINGLCLEG 490

Query: 313 RIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGV 364
            ++ A  +   M   GC    V+   +I    +    E A  L R++I+ G+
Sbjct: 491 LLNEAETLLSKMEDNGCVPDAVTCETIIRALFENDKNERAEKLLREMIARGL 542


>gi|356529489|ref|XP_003533323.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Glycine max]
          Length = 550

 Score =  334 bits (856), Expect = 8e-89,   Method: Compositional matrix adjust.
 Identities = 176/497 (35%), Positives = 279/497 (56%), Gaps = 34/497 (6%)

Query: 50  KSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPD 109
           KSG   +++A   F  +  M P P +  FN++ G++ K +HY   IS  +++   G+ P 
Sbjct: 53  KSGFDAIDDAVALFTRLITMHPLPSVVEFNMILGSIVKMKHYPTAISLSKQMGLRGITPS 112

Query: 110 FLTLNILINCF----------------------------GNKERGLCVENRIKEATWLFK 141
            +TL+ILINC+                                +GLC+   +++A     
Sbjct: 113 IVTLSILINCYCHLGHMGFAFSVLGMVLKRGYQLNAITLTTIMKGLCINGEVRKALEFHD 172

Query: 142 NMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIID 201
           +++A G   D +TYGTLING C+ G    A  L  KM       G + + N+  Y++I+D
Sbjct: 173 SVVAQGFLLDEVTYGTLINGLCKIGLTREAFELLHKM------EGQVVRPNVVIYNMIVD 226

Query: 202 SLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRP 261
            LCK+GLV +A++L+ ++ GRGI+P V   T LIHGFC  G W EV  L  +M+D     
Sbjct: 227 GLCKDGLVTEARDLYSDVVGRGIDPDVFTYTCLIHGFCGLGQWREVTRLLCDMVDRNVNL 286

Query: 262 NLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIF 321
           N+ T+N++ID LCK G + +A+ +  LMI+RG  PD  T+N+LM GYCL   +  AR++F
Sbjct: 287 NVYTYNILIDALCKKGMLGKAHDMRNLMIERGQRPDLVTFNTLMSGYCLYNDVVEARKLF 346

Query: 322 LSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQA 381
            +    G    V SYNILI GYCK   ++EA+SL+ ++    +   ++TY++L+ GL ++
Sbjct: 347 DTFAECGITPDVWSYNILIIGYCKNNRIDEALSLFNKMNYKKLAPNIVTYSSLIDGLCKS 406

Query: 382 GQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIF 441
           G+  YA +LF  +      P++ TYNI++D LCK   V +A++LF+++        +  +
Sbjct: 407 GRISYAWELFSAIHDGGPSPNVITYNIMLDALCKIQLVDKAIELFNLMFERGLTPNVSSY 466

Query: 442 NCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEK 501
           N LI+G CK+ R+D A  LF ++ ++ LVP  VTY+ +I GLC+ G++  A +    M  
Sbjct: 467 NILINGYCKSKRIDEAMNLFEEMHRRNLVPDSVTYNCLIDGLCKSGRISHAWELFNVMHD 526

Query: 502 NGCAPNVVTFNTLMHGF 518
            G   +V+T+N L   F
Sbjct: 527 GGPPVDVITYNILFDAF 543



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 94/275 (34%), Positives = 140/275 (50%), Gaps = 13/275 (4%)

Query: 75  ISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIK 134
           + ++N+L  A+ K             ++  G  PD +T N L++       G C+ N + 
Sbjct: 288 VYTYNILIDALCKKGMLGKAHDMRNLMIERGQRPDLVTFNTLMS-------GYCLYNDVV 340

Query: 135 EATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIF 194
           EA  LF      G+ PDV +Y  LI G+C+   +  AL L  KM   +Y+       NI 
Sbjct: 341 EARKLFDTFAECGITPDVWSYNILIIGYCKNNRIDEALSLFNKM---NYKK---LAPNIV 394

Query: 195 SYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEM 254
           +YS +ID LCK G +  A ELF  +   G +P V+    ++   C     ++   LF  M
Sbjct: 395 TYSSLIDGLCKSGRISYAWELFSAIHDGGPSPNVITYNIMLDALCKIQLVDKAIELFNLM 454

Query: 255 LDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRI 314
            + G  PN+ ++N++I+  CK  +I+EA  L E M +R L PD  TYN L+DG C  GRI
Sbjct: 455 FERGLTPNVSSYNILINGYCKSKRIDEAMNLFEEMHRRNLVPDSVTYNCLIDGLCKSGRI 514

Query: 315 DTAREIFLSMHSKGCKHTVVSYNILINGYCKILNV 349
             A E+F  MH  G    V++YNIL + + KI +V
Sbjct: 515 SHAWELFNVMHDGGPPVDVITYNILFDAFSKIQHV 549


>gi|356529513|ref|XP_003533335.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 794

 Score =  334 bits (856), Expect = 9e-89,   Method: Compositional matrix adjust.
 Identities = 182/490 (37%), Positives = 281/490 (57%), Gaps = 34/490 (6%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKE-------- 124
           PPI  FN +  + AK +HY   +S   +L   G+ PD  TLNILINCF +          
Sbjct: 305 PPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFGFSV 364

Query: 125 --------------------RGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCR 164
                               +GLC++ ++K+A      ++A G + + ++Y TLING C+
Sbjct: 365 LAKILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCK 424

Query: 165 TGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGI 224
            G+   A++L +K+      +G ++K N+  YS IID+LCK  LV +A  LF EM  +GI
Sbjct: 425 IGDTRGAIKLLRKI------DGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGI 478

Query: 225 NPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANG 284
           +  VV  +TLI+GFC  G  +E  GL  EM+     P++ T+ +++D L K GK+ EA  
Sbjct: 479 SADVVTYSTLIYGFCIVGKLKEAIGLLNEMVLKTINPDVRTYTILVDALGKEGKVKEAKS 538

Query: 285 LLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYC 344
           +L +M++  + PD FTYN+LM+GY LV  +  A+ +F +M   G    V +Y ILING+C
Sbjct: 539 VLAVMLKACVKPDVFTYNTLMNGYLLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFC 598

Query: 345 KILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLS 404
           K   V+EA++L++++    +    +TY++L+ GL ++G+  Y   L DEM+      D+ 
Sbjct: 599 KSKMVDEALNLFKEMHQKNMVPDTVTYSSLVDGLCKSGRISYVWDLIDEMRDRGQPADVI 658

Query: 405 TYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKL 464
           TYN LIDGLCKN  + +A+ LF+ ++          F  L+DGLCK GRL +A E+F  L
Sbjct: 659 TYNSLIDGLCKNGHLDKAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDL 718

Query: 465 PQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKT 524
             KG    V  Y++MI+G C++G LE+A   L  ME+NGC PN VTF+ +++   + ++ 
Sbjct: 719 LTKGYHLDVYIYNVMIYGHCKQGLLEEALTMLSKMEENGCIPNAVTFDIIINALFKKDEN 778

Query: 525 SKVVELLHKM 534
            K  +LL +M
Sbjct: 779 DKAEKLLRQM 788



 Score =  269 bits (687), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 173/531 (32%), Positives = 278/531 (52%), Gaps = 52/531 (9%)

Query: 92  DAV-ISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRP 150
           DAV +S   K++  G  PD +TLN LI       +GLC++ ++KEA      ++A G + 
Sbjct: 44  DAVSLSVLTKILKRGYPPDTVTLNTLI-------KGLCLKGQVKEALHFHDKLLAQGFQL 96

Query: 151 DVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVD 210
           + ++Y TLING CR G+   A++  +K+      +G ++K N+  Y+ IID+LCK  LV 
Sbjct: 97  NQVSYATLINGVCRIGDTRAAIKFLRKI------DGRLAKPNVEMYNTIIDALCKYQLVS 150

Query: 211 KAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMI 270
           +A  LF EM  +GI+  VV  +TLI+GFC  G  +E  GL   M+     PN+ T+N+++
Sbjct: 151 EAYGLFSEMTVKGISANVVTYSTLIYGFCIVGKLKEALGLLNVMVLKTINPNVCTYNILV 210

Query: 271 DCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCK 330
           D LCK GK+ EA  +L +M++  +  +  TY++LMDGY LV  +  A+ +F +M   G  
Sbjct: 211 DALCKEGKVKEAKSVLAVMLKACVKSNVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVT 270

Query: 331 HTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKL 390
             V SYNI+ING+CKI  V++A++L++++I +     +I +N +L    +      A  L
Sbjct: 271 PDVHSYNIMINGFCKIKRVDKALNLFKEMILSRF-PPIIQFNKILDSFAKMKHYSTAVSL 329

Query: 391 FDEMKLYNVEPDLSTYNILID-----------------------------------GLCK 415
              ++L  ++PDL T NILI+                                   GLC 
Sbjct: 330 SHRLELKGIQPDLFTLNILINCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCL 389

Query: 416 NNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVT 475
              V++A+     L    F+     +  LI+G+CK G    A +L  K+  +   P V  
Sbjct: 390 KGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEM 449

Query: 476 YSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMA 535
           YS +I  LC+   + +A      M   G + +VVT++TL++GF    K  + + LL++M 
Sbjct: 450 YSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIVGKLKEAIGLLNEMV 509

Query: 536 EPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKSSYRACLYVTIFQPSSL 586
               N  PD  T++I+VD L K+ K  E  +V     +AC+   +F  ++L
Sbjct: 510 LKTIN--PDVRTYTILVDALGKEGKVKEAKSVLAVMLKACVKPDVFTYNTL 558



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 159/635 (25%), Positives = 272/635 (42%), Gaps = 122/635 (19%)

Query: 40  QLNEFLHENCKSGIINLNEARYFFGYMTHMQ---PSPPISSFNLLFGAVAKNRHYDAVIS 96
           QLN+  +    +G+  + + R    ++  +      P +  +N +  A+ K +       
Sbjct: 95  QLNQVSYATLINGVCRIGDTRAAIKFLRKIDGRLAKPNVEMYNTIIDALCKYQLVSEAYG 154

Query: 97  FYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYG 156
            + ++   G+  + +T + LI        G C+  ++KEA  L   M+   + P+V TY 
Sbjct: 155 LFSEMTVKGISANVVTYSTLI-------YGFCIVGKLKEALGLLNVMVLKTINPNVCTYN 207

Query: 157 TLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELF 216
            L++  C+ G +  A  +   M+          K+N+ +YS ++D       V KA+ +F
Sbjct: 208 ILVDALCKEGKVKEAKSVLAVMLKA------CVKSNVITYSTLMDGYFLVYEVKKAQHVF 261

Query: 217 LEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEM---------------------- 254
             M   G+ P V     +I+GFC     ++   LF EM                      
Sbjct: 262 NAMSLMGVTPDVHSYNIMINGFCKIKRVDKALNLFKEMILSRFPPIIQFNKILDSFAKMK 321

Query: 255 -----------LDL-GPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYN 302
                      L+L G +P+L T N++I+C C  G+I     +L  +++RG  P   T N
Sbjct: 322 HYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFGFSVLAKILKRGYPPSTVTLN 381

Query: 303 SLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILN-------------- 348
           +L+ G CL G++  A      + ++G +   VSY  LING CKI +              
Sbjct: 382 TLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGR 441

Query: 349 ---------------------VEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYA 387
                                V EA  L+ ++   G+   V+TY+TL+ G    G+   A
Sbjct: 442 LTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIVGKLKEA 501

Query: 388 QKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEA------------------------- 422
             L +EM L  + PD+ TY IL+D L K   V+EA                         
Sbjct: 502 IGLLNEMVLKTINPDVRTYTILVDALGKEGKVKEAKSVLAVMLKACVKPDVFTYNTLMNG 561

Query: 423 ------VK----LFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPT 472
                 VK    +F+ + +      +  +  LI+G CK+  +D A  LF ++ QK +VP 
Sbjct: 562 YLLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKSKMVDEALNLFKEMHQKNMVPD 621

Query: 473 VVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLH 532
            VTYS ++ GLC+ G++    D +  M   G   +V+T+N+L+ G  +N    K + L +
Sbjct: 622 TVTYSSLVDGLCKSGRISYVWDLIDEMRDRGQPADVITYNSLIDGLCKNGHLDKAIALFN 681

Query: 533 KMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAV 567
           KM   ++ + P+  TF+I++D L K  +  +   V
Sbjct: 682 KMK--DQGIRPNTFTFTILLDGLCKGGRLKDAQEV 714



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 108/345 (31%), Positives = 182/345 (52%), Gaps = 6/345 (1%)

Query: 126 GLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYEN 185
            LC    + EA  LF  M   G+  DV+TY TLI GFC  G L  A+ L  +MV      
Sbjct: 456 ALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIVGKLKEAIGLLNEMVLKTIN- 514

Query: 186 GLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWE 245
                 ++ +Y+I++D+L KEG V +AK +   M    + P V    TL++G+      +
Sbjct: 515 -----PDVRTYTILVDALGKEGKVKEAKSVLAVMLKACVKPDVFTYNTLMNGYLLVYEVK 569

Query: 246 EVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLM 305
           +   +F  M  +G  P++ T+ ++I+  CK   ++EA  L + M Q+ + PD  TY+SL+
Sbjct: 570 KAQHVFNAMSLMGVTPDVHTYTILINGFCKSKMVDEALNLFKEMHQKNMVPDTVTYSSLV 629

Query: 306 DGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVR 365
           DG C  GRI    ++   M  +G    V++YN LI+G CK  ++++A++L+ ++   G+R
Sbjct: 630 DGLCKSGRISYVWDLIDEMRDRGQPADVITYNSLIDGLCKNGHLDKAIALFNKMKDQGIR 689

Query: 366 QTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKL 425
               T+  LL GL + G+   AQ++F ++       D+  YN++I G CK   ++EA+ +
Sbjct: 690 PNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLDVYIYNVMIYGHCKQGLLEEALTM 749

Query: 426 FHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLV 470
              +E N        F+ +I+ L K    D A +L  ++  +GL+
Sbjct: 750 LSKMEENGCIPNAVTFDIIINALFKKDENDKAEKLLRQMIARGLL 794



 Score =  162 bits (409), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 100/338 (29%), Positives = 168/338 (49%), Gaps = 15/338 (4%)

Query: 27  SPRQIAAVSSPETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVA 86
           S   +  +S+     +  ++  C  G   L EA      M     +P + ++ +L  A+ 
Sbjct: 471 SEMTVKGISADVVTYSTLIYGFCIVG--KLKEAIGLLNEMVLKTINPDVRTYTILVDALG 528

Query: 87  KNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAF 146
           K        S    ++   + PD  T N L+N       G  +   +K+A  +F  M   
Sbjct: 529 KEGKVKEAKSVLAVMLKACVKPDVFTYNTLMN-------GYLLVYEVKKAQHVFNAMSLM 581

Query: 147 GVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKE 206
           GV PDV TY  LINGFC++  +  AL L K+M    ++  ++  T   +YS ++D LCK 
Sbjct: 582 GVTPDVHTYTILINGFCKSKMVDEALNLFKEM----HQKNMVPDT--VTYSSLVDGLCKS 635

Query: 207 GLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTF 266
           G +    +L  EM+ RG    V+   +LI G C  G+ ++   LF +M D G RPN  TF
Sbjct: 636 GRISYVWDLIDEMRDRGQPADVITYNSLIDGLCKNGHLDKAIALFNKMKDQGIRPNTFTF 695

Query: 267 NVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHS 326
            +++D LCKGG++ +A  + + ++ +G + D + YN ++ G+C  G ++ A  +   M  
Sbjct: 696 TILLDGLCKGGRLKDAQEVFQDLLTKGYHLDVYIYNVMIYGHCKQGLLEEALTMLSKMEE 755

Query: 327 KGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGV 364
            GC    V+++I+IN   K    ++A  L RQ+I+ G+
Sbjct: 756 NGCIPNAVTFDIIINALFKKDENDKAEKLLRQMIARGL 793


>gi|357449185|ref|XP_003594869.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355483917|gb|AES65120.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 545

 Score =  333 bits (854), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 174/492 (35%), Positives = 279/492 (56%), Gaps = 34/492 (6%)

Query: 71  PSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKE------ 124
           P PP   F  + G++ K + Y   +S  +++   G+ PDF+T N+L+NCF          
Sbjct: 54  PIPPAIEFGKILGSLLKAKQYQTALSLSQQMEFNGIKPDFITCNLLMNCFSQLGHIKFSF 113

Query: 125 ----------------------RGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGF 162
                                 +GLC++  + +A +    ++A G + D ++YGTLING 
Sbjct: 114 SVFAKILKKGYHPDAVTFTILIKGLCLKGEVHKALYFHDKVVAQGFQLDQVSYGTLINGL 173

Query: 163 CRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGR 222
           CR G    A++L +++      +G + + N+  YS IIDS+CK+ LV+ A +L+ EM  +
Sbjct: 174 CRVGETKAAVQLLRRV------DGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSK 227

Query: 223 GINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEA 282
            I+P VV  ++LI GFC  G  +    LF  M+     PN+ TF+++ID  CK GK+ EA
Sbjct: 228 RISPDVVTYSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKEGKVREA 287

Query: 283 NGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILING 342
             +L +M+++ +  D  TYNSLMDGYCLV +++ A+ +F  M  +G    V SY+I+ING
Sbjct: 288 KNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDVWSYSIMING 347

Query: 343 YCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPD 402
           +CKI  V+EAM L+ ++    +   V+TYN+L+ GL ++G+   A +L DEM       +
Sbjct: 348 FCKIKMVDEAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGRTSCALELVDEMHDRGQPSN 407

Query: 403 LSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFH 462
           + TYN ++D +CKNN V +A+ L   ++    +  I  +  LI+GLCK GRLD+A ++F 
Sbjct: 408 IITYNSILDAICKNNHVDKAIVLLTKIKEKGIQPDIFTYTVLINGLCKVGRLDDAQKVFE 467

Query: 463 KLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNN 522
            L  KG  P + TY+ +I+G C KG  ++    L  M+ NGC PN +T+  L+H   + +
Sbjct: 468 DLLVKGYSPNIYTYTSLINGFCNKGFFDEGLAMLSKMKDNGCIPNAITYEILIHSLFEKD 527

Query: 523 KTSKVVELLHKM 534
           +  K  +LL +M
Sbjct: 528 ENDKAEKLLREM 539



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 91/351 (25%), Positives = 167/351 (47%), Gaps = 50/351 (14%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CK  ++N  +A   +  M   + SP + +++ L             +  + +++S  + P
Sbjct: 209 CKDKLVN--DAFDLYCEMVSKRISPDVVTYSSLISGFCVVGKLKYAVDLFNRMISDNINP 266

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           +  T +ILI+       G C E +++EA  +   M+   V+ DV+TY +L++G+C    +
Sbjct: 267 NVYTFSILID-------GFCKEGKVREAKNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQV 319

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
           + A  L   M     + G+    +++SYSI+I+  CK  +VD+A +LF EM  + I P V
Sbjct: 320 NKAKSLFNVMA----QRGVTP--DVWSYSIMINGFCKIKMVDEAMKLFEEMHCKQIFPNV 373

Query: 229 VVCTTLIHGFCCAGNWEEVNGLFIEMLDLGP----------------------------- 259
           V   +L+ G C +G       L  EM D G                              
Sbjct: 374 VTYNSLVDGLCKSGRTSCALELVDEMHDRGQPSNIITYNSILDAICKNNHVDKAIVLLTK 433

Query: 260 ------RPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGR 313
                 +P++ T+ V+I+ LCK G++++A  + E ++ +G +P+ +TY SL++G+C  G 
Sbjct: 434 IKEKGIQPDIFTYTVLINGLCKVGRLDDAQKVFEDLLVKGYSPNIYTYTSLINGFCNKGF 493

Query: 314 IDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGV 364
            D    +   M   GC    ++Y ILI+   +    ++A  L R++I+ G+
Sbjct: 494 FDEGLAMLSKMKDNGCIPNAITYEILIHSLFEKDENDKAEKLLREMIARGL 544


>gi|356532718|ref|XP_003534918.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 529

 Score =  333 bits (853), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 181/497 (36%), Positives = 274/497 (55%), Gaps = 34/497 (6%)

Query: 66  MTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCF----- 120
           M  ++ +PPI  FN + G++AK + Y   IS  +++   G+  +F+TLNILINCF     
Sbjct: 1   MLLVRHTPPIIEFNKILGSLAKMKQYLTAISLSKQMEVKGIRANFVTLNILINCFCHLGQ 60

Query: 121 -----------------------GNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGT 157
                                      +GLC++  +K++      ++A G + D ++YGT
Sbjct: 61  MAFSFSVLGKILKLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGT 120

Query: 158 LINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFL 217
           L+NG C+ G    A++L + +          ++ N+  Y+ IID LCK+ LV++A +L+ 
Sbjct: 121 LLNGLCKIGETRCAVKLLRMIEDRS------TRPNVVMYNTIIDGLCKDKLVNEAYDLYS 174

Query: 218 EMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGG 277
           EM  RGI P  +  TTLI+GFC  G       L  EM+     P +  +N++I+ LCK G
Sbjct: 175 EMDARGIFPDAITYTTLIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEG 234

Query: 278 KINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYN 337
            + EA  LL +M + G+ P   TY++LMDGYCLVG +  A++IF +M   G    V SYN
Sbjct: 235 NVKEAKNLLAVMTKEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYN 294

Query: 338 ILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLY 397
           I+ING CK   V+EAM+L R+++   +    +TYN+L+ GL ++G+   A  L +EM   
Sbjct: 295 IMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHR 354

Query: 398 NVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNA 457
               D+ TY  L+D LCKN  + +A  LF  ++    +  +  +  LIDGLCK GRL NA
Sbjct: 355 GQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNA 414

Query: 458 WELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHG 517
            ELF  L  KG    V TY++MI GLC++G  ++A      ME NGC PN VTF  ++  
Sbjct: 415 QELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRS 474

Query: 518 FLQNNKTSKVVELLHKM 534
             + ++  K  +LLH+M
Sbjct: 475 LFEKDENDKAEKLLHEM 491



 Score =  224 bits (572), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 132/394 (33%), Positives = 207/394 (52%), Gaps = 13/394 (3%)

Query: 77  SFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEA 136
           S+  L   + K       +   R +      P+ +  N +I+       GLC +  + EA
Sbjct: 117 SYGTLLNGLCKIGETRCAVKLLRMIEDRSTRPNVVMYNTIID-------GLCKDKLVNEA 169

Query: 137 TWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSY 196
             L+  M A G+ PD ITY TLI GFC  G L  A  L  +M+  +   G      ++ Y
Sbjct: 170 YDLYSEMDARGIFPDAITYTTLIYGFCLLGQLMGAFSLLDEMILKNINPG------VYIY 223

Query: 197 SIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLD 256
           +I+I++LCKEG V +AK L   M   GI P VV  +TL+ G+C  G  +    +F  M+ 
Sbjct: 224 NILINALCKEGNVKEAKNLLAVMTKEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQ 283

Query: 257 LGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDT 316
           +G  PN+ ++N+MI+ LCK  +++EA  LL  M+ + + PD  TYNSL+DG C  GRI +
Sbjct: 284 MGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITS 343

Query: 317 AREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLS 376
           A  +   MH +G    VV+Y  L++  CK  N+++A +L+ ++   G++ T+ TY  L+ 
Sbjct: 344 ALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALID 403

Query: 377 GLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEF 436
           GL + G+   AQ+LF  + +     D+ TY ++I GLCK     EA+ +   +E N    
Sbjct: 404 GLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIP 463

Query: 437 GIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLV 470
               F  +I  L +    D A +L H++  KGL+
Sbjct: 464 NAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGLL 497



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 74/239 (30%), Positives = 121/239 (50%), Gaps = 13/239 (5%)

Query: 56  LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNI 115
           +  A+  F  M  M  +P + S+N++   + K +  D  ++  R+++   ++PD +T N 
Sbjct: 271 VQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNS 330

Query: 116 LINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLH 175
           LI+       GLC   RI  A  L   M   G   DV+TY +L++  C+  NL  A  L 
Sbjct: 331 LID-------GLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALF 383

Query: 176 KKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLI 235
            KM     E G+  +  +++Y+ +ID LCK G +  A+ELF  +  +G    V   T +I
Sbjct: 384 MKM----KERGI--QPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMI 437

Query: 236 HGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGL 294
            G C  G ++E   +  +M D G  PN +TF ++I  L +  + ++A  LL  MI +GL
Sbjct: 438 SGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGL 496


>gi|358347566|ref|XP_003637827.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503762|gb|AES84965.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 639

 Score =  332 bits (850), Expect = 5e-88,   Method: Compositional matrix adjust.
 Identities = 188/530 (35%), Positives = 296/530 (55%), Gaps = 35/530 (6%)

Query: 41  LNEFLH-ENCKSGIINLNEARYFFGYMTHMQ-PSPPISSFNLLFGAVAKNRHYDAVISFY 98
           LN  LH +   S I NL++A   F ++ HM   +PPI  FN +  ++ K  H+   ISF 
Sbjct: 17  LNRRLHIQPLPSFIDNLDDAVSSFNHILHMNNHTPPIFEFNKILSSLVKMNHFKIAISFS 76

Query: 99  RKLVSIGLLPDFLTLNILINCFGN----------------------------KERGLCVE 130
           +++   G+ P+  T NILINCF +                              RGLC+ 
Sbjct: 77  QQMELKGIQPEMFTFNILINCFSHLCQLNFAFSMVAKILKLGYQPDTVTVNTLLRGLCLN 136

Query: 131 NRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISK 190
            ++KEA     ++I      D ++YGTLING C++G    AL+L +K+     E  L+ +
Sbjct: 137 GKVKEALNFHDHVIRKRFHLDQVSYGTLINGLCKSGETRAALQLLRKI-----EGLLLVR 191

Query: 191 TNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGL 250
            ++  Y+ IIDS CK+ LV  A +L+ EM  + I P VV   +LI+GFC  G  +E  GL
Sbjct: 192 PDVIMYTAIIDSFCKDKLVIDAYDLYSEMIVKKIYPNVVTFNSLIYGFCIVGQLKEAVGL 251

Query: 251 FIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCL 310
             EM      PN+ TFN++ID LCK G++ +A  +L +MI++G+ P+  TY SLMDGY L
Sbjct: 252 LNEMSLNNVNPNVYTFNILIDGLCKEGEVKKATSVLSVMIKQGVEPNVVTYTSLMDGYFL 311

Query: 311 VGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVIT 370
           V  ++ A+ +F ++  +G    V SY+++ING CK   V+EA+ L++++    +    +T
Sbjct: 312 VKEVNKAKHVFNTISLRGVTPNVHSYSVMINGLCKNKMVDEAVKLFKEMHLKNMTPNTVT 371

Query: 371 YNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLE 430
           Y++L+ GL ++G+      L DE+       ++ TYN L++GLCKN+ V +A+ L   ++
Sbjct: 372 YSSLIDGLCKSGRISDVWDLIDEINNRGQPANIITYNSLLNGLCKNHQVDKAIALLTKMK 431

Query: 431 MNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLE 490
               +  +  +  L+DGLCK GRL +A  ++  L  KG    +  Y++MI+GLC++G  +
Sbjct: 432 DEGIQPDMSTYTTLVDGLCKNGRLKDAQRIYQDLLCKGYPLNIRMYTVMINGLCKEGFFD 491

Query: 491 KANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERN 540
           +A   L  ME NGC P+ VT+ TL+    +NNK  K V+LL +M   E +
Sbjct: 492 EALSLLSQMEDNGCMPDAVTYETLISALFKNNKNGKAVKLLREMIARESD 541



 Score =  138 bits (348), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 86/313 (27%), Positives = 164/313 (52%), Gaps = 3/313 (0%)

Query: 261 PNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREI 320
           P +  FN ++  L K      A    + M  +G+ P+ FT+N L++ +  + +++ A  +
Sbjct: 51  PPIFEFNKILSSLVKMNHFKIAISFSQQMELKGIQPEMFTFNILINCFSHLCQLNFAFSM 110

Query: 321 FLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQ 380
              +   G +   V+ N L+ G C    V+EA++ +  +I        ++Y TL++GL +
Sbjct: 111 VAKILKLGYQPDTVTVNTLLRGLCLNGKVKEALNFHDHVIRKRFHLDQVSYGTLINGLCK 170

Query: 381 AGQAGYAQKLFDEMK-LYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIE 439
           +G+   A +L  +++ L  V PD+  Y  +ID  CK+  V +A  L+  + + K    + 
Sbjct: 171 SGETRAALQLLRKIEGLLLVRPDVIMYTAIIDSFCKDKLVIDAYDLYSEMIVKKIYPNVV 230

Query: 440 IFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYM 499
            FN LI G C  G+L  A  L +++    + P V T++I+I GLC++G+++KA   L  M
Sbjct: 231 TFNSLIYGFCIVGQLKEAVGLLNEMSLNNVNPNVYTFNILIDGLCKEGEVKKATSVLSVM 290

Query: 500 EKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDE 559
            K G  PNVVT+ +LM G+    + +K   + + ++   R + P+  ++S++++ L K++
Sbjct: 291 IKQGVEPNVVTYTSLMDGYFLVKEVNKAKHVFNTIS--LRGVTPNVHSYSVMINGLCKNK 348

Query: 560 KYHECSAVSKSSY 572
              E   + K  +
Sbjct: 349 MVDEAVKLFKEMH 361



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 68/245 (27%), Positives = 124/245 (50%), Gaps = 3/245 (1%)

Query: 324 MHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQ 383
           +H       +  +N +++   K+ + + A+S  +Q+   G++  + T+N L++      Q
Sbjct: 44  LHMNNHTPPIFEFNKILSSLVKMNHFKIAISFSQQMELKGIQPEMFTFNILINCFSHLCQ 103

Query: 384 AGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNC 443
             +A  +  ++     +PD  T N L+ GLC N  V+EA+     +   +F      +  
Sbjct: 104 LNFAFSMVAKILKLGYQPDTVTVNTLLRGLCLNGKVKEALNFHDHVIRKRFHLDQVSYGT 163

Query: 444 LIDGLCKAGRLDNAWELFHKLPQKGLV-PTVVTYSIMIHGLCRKGKLEKANDFLLYMEKN 502
           LI+GLCK+G    A +L  K+    LV P V+ Y+ +I   C+   +  A D    M   
Sbjct: 164 LINGLCKSGETRAALQLLRKIEGLLLVRPDVIMYTAIIDSFCKDKLVIDAYDLYSEMIVK 223

Query: 503 GCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYH 562
              PNVVTFN+L++GF    +  + V LL++M+    N+ P+  TF+I++D L K+ +  
Sbjct: 224 KIYPNVVTFNSLIYGFCIVGQLKEAVGLLNEMS--LNNVNPNVYTFNILIDGLCKEGEVK 281

Query: 563 ECSAV 567
           + ++V
Sbjct: 282 KATSV 286


>gi|357439843|ref|XP_003590199.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355479247|gb|AES60450.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 834

 Score =  331 bits (848), Expect = 7e-88,   Method: Compositional matrix adjust.
 Identities = 183/510 (35%), Positives = 287/510 (56%), Gaps = 34/510 (6%)

Query: 55  NLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLN 114
           NLN+A   F  M  M+P PPI  F  + G++ K +HY  VI  ++++   G+  +++TLN
Sbjct: 29  NLNDAIDSFNRMLRMRPPPPIIKFGKILGSLVKTKHYPIVIHLFQRMELHGIQSNYITLN 88

Query: 115 ILINCFGNKE----------------------------RGLCVENRIKEATWLFKNMIAF 146
           ILIN + +                              RGLC+  ++KE+      +++ 
Sbjct: 89  ILINSYCHLRQINSAFSVFAKILKLGYQPDIITYTTLIRGLCLNGQVKESLNFHDRLVSQ 148

Query: 147 GVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKE 206
           G++ D ++YGTLING C+ G    ALRL +K+       G I + ++  Y+ IID LCK+
Sbjct: 149 GIKLDHVSYGTLINGLCKIGQTGPALRLLRKI------EGEICRPDVVMYNTIIDGLCKD 202

Query: 207 GLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTF 266
            LV  A +L+ EM  + + P VV  T+LI+GFC  G  ++  GL  EM+     PN+ TF
Sbjct: 203 KLVRDAFDLYCEMFEKRVFPNVVTYTSLIYGFCIVGQLDKAFGLLNEMVLKNVNPNVCTF 262

Query: 267 NVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHS 326
           N ++D LCK GK+ EA  L+ +M++ G+ PD FTYN+LMDGY LV     A+ +F  M  
Sbjct: 263 NTLVDGLCKEGKMREAKSLVAVMMKEGVGPDVFTYNALMDGYFLVKEAGKAKNVFNIMAQ 322

Query: 327 KGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGY 386
            G    V SY+++I+G  K+  ++EAM L+  + +  V   V+ Y++L+ GL ++G+   
Sbjct: 323 MGVTCDVHSYSVMISGLSKMKMLDEAMDLFEGMRNENVIPDVVAYSSLIDGLCKSGRINS 382

Query: 387 AQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLID 446
           A K  DEM      P++ TY  LID LCK++ V +A+ L   ++    +  +  +N L+D
Sbjct: 383 ALKYVDEMHDRGQPPNVITYTSLIDALCKSHQVDKAIALLKKIKDQGIQANMYTYNILVD 442

Query: 447 GLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAP 506
           GLCK GRL +A ++F  L  KG    VVTYSIMI+GLC++   ++A   L  ME  GC P
Sbjct: 443 GLCKDGRLTDAQKVFQDLLMKGHNVDVVTYSIMINGLCKESLFDEALTLLSKMEDKGCVP 502

Query: 507 NVVTFNTLMHGFLQNNKTSKVVELLHKMAE 536
           + + + T+++ F + +   K  +LL +M +
Sbjct: 503 DAIAYETIINAFFEKDMNDKAEKLLREMID 532



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 116/428 (27%), Positives = 216/428 (50%), Gaps = 8/428 (1%)

Query: 140 FKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSII 199
           F  M+     P +I +G ++    +T +  + + L ++M      +G+  ++N  + +I+
Sbjct: 37  FNRMLRMRPPPPIIKFGKILGSLVKTKHYPIVIHLFQRMEL----HGI--QSNYITLNIL 90

Query: 200 IDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGP 259
           I+S C    ++ A  +F ++   G  P ++  TTLI G C  G  +E       ++  G 
Sbjct: 91  INSYCHLRQINSAFSVFAKILKLGYQPDIITYTTLIRGLCLNGQVKESLNFHDRLVSQGI 150

Query: 260 RPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTARE 319
           + + +++  +I+ LCK G+   A  LL  +      PD   YN+++DG C    +  A +
Sbjct: 151 KLDHVSYGTLINGLCKIGQTGPALRLLRKIEGEICRPDVVMYNTIIDGLCKDKLVRDAFD 210

Query: 320 IFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLF 379
           ++  M  K     VV+Y  LI G+C +  +++A  L  +++   V   V T+NTL+ GL 
Sbjct: 211 LYCEMFEKRVFPNVVTYTSLIYGFCIVGQLDKAFGLLNEMVLKNVNPNVCTFNTLVDGLC 270

Query: 380 QAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIE 439
           + G+   A+ L   M    V PD+ TYN L+DG        +A  +F+++        + 
Sbjct: 271 KEGKMREAKSLVAVMMKEGVGPDVFTYNALMDGYFLVKEAGKAKNVFNIMAQMGVTCDVH 330

Query: 440 IFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYM 499
            ++ +I GL K   LD A +LF  +  + ++P VV YS +I GLC+ G++  A  ++  M
Sbjct: 331 SYSVMISGLSKMKMLDEAMDLFEGMRNENVIPDVVAYSSLIDGLCKSGRINSALKYVDEM 390

Query: 500 EKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDE 559
              G  PNV+T+ +L+    ++++  K + LL K+   ++ +  +  T++I+VD L KD 
Sbjct: 391 HDRGQPPNVITYTSLIDALCKSHQVDKAIALLKKIK--DQGIQANMYTYNILVDGLCKDG 448

Query: 560 KYHECSAV 567
           +  +   V
Sbjct: 449 RLTDAQKV 456



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 48/205 (23%), Positives = 98/205 (47%), Gaps = 2/205 (0%)

Query: 348 NVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYN 407
           N+ +A+  + +++       +I +  +L  L +         LF  M+L+ ++ +  T N
Sbjct: 29  NLNDAIDSFNRMLRMRPPPPIIKFGKILGSLVKTKHYPIVIHLFQRMELHGIQSNYITLN 88

Query: 408 ILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQK 467
           ILI+  C    +  A  +F  +    ++  I  +  LI GLC  G++  +     +L  +
Sbjct: 89  ILINSYCHLRQINSAFSVFAKILKLGYQPDIITYTTLIRGLCLNGQVKESLNFHDRLVSQ 148

Query: 468 GLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKV 527
           G+    V+Y  +I+GLC+ G+   A   L  +E   C P+VV +NT++ G  ++      
Sbjct: 149 GIKLDHVSYGTLINGLCKIGQTGPALRLLRKIEGEICRPDVVMYNTIIDGLCKDKLVRDA 208

Query: 528 VELLHKMAEPERNLVPDDTTFSIVV 552
            +L  +M   E+ + P+  T++ ++
Sbjct: 209 FDLYCEMF--EKRVFPNVVTYTSLI 231


>gi|356519375|ref|XP_003528348.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 589

 Score =  330 bits (847), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 188/532 (35%), Positives = 286/532 (53%), Gaps = 39/532 (7%)

Query: 59  ARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILIN 118
           A  FF  M  M P P    F  LFG + K +HY   IS  + + S+G+ PD  TL I+IN
Sbjct: 55  ALSFFHKMVVMNPLPREKDFTKLFGIIVKMKHYATTISLIKHIYSLGIKPDVYTLTIIIN 114

Query: 119 CFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKM 178
           C       LC  N       +   M   GV P V+T+ TLING C  GN++ A R    +
Sbjct: 115 C-------LCHLNHTVFGFSVLGVMFKIGVDPTVVTFATLINGLCAEGNVARAARFADSL 167

Query: 179 ----------VSGDYENGLISKTN--------------------IFSYSIIIDSLCKEGL 208
                       G   NGL    +                    + +YS I+DSLCK+G+
Sbjct: 168 EDMGHQSNSYTYGAIINGLCKAGDTSGAILYLEKIKGRNCDLDVVIAYSTIMDSLCKDGM 227

Query: 209 VDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNV 268
           V +A  LF  M  +GI P +V   +LIHG C  G W+E   L   M+  G  PN+ TFNV
Sbjct: 228 VCEALNLFSGMTSKGIQPDLVAYNSLIHGLCNFGRWKEATTLLGNMMRKGIMPNVQTFNV 287

Query: 269 MIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKG 328
           ++D  CK G I+ A  ++  M+  G+ PD  TYNS++ G+CL+ ++  A ++F  M  KG
Sbjct: 288 LVDNFCKDGMISRAKTIMGFMVHVGVEPDVVTYNSVISGHCLLSQMGDAVKVFELMIHKG 347

Query: 329 CKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQ 388
               +V+Y+ LI+G+CK  N+ +A+ L  +++++G+   V+T++TL+ G  +AG+   A+
Sbjct: 348 FLPNLVTYSSLIHGWCKTKNINKALFLLGEMVNSGLNPDVVTWSTLIGGFCKAGKPEAAK 407

Query: 389 KLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGL 448
           +LF  M  ++  P+L T  I++DGL K     EA+ LF  +E    E  + I+N ++DG+
Sbjct: 408 ELFCTMHEHDQHPNLQTCAIILDGLFKCQFHSEAISLFREMEKMNLELNVVIYNIVLDGM 467

Query: 449 CKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNV 508
           C  G+L++A ELF  LP KG+   VV Y+ MI GLC++G L+ A + L+ ME+NGC PN 
Sbjct: 468 CSFGKLNDAQELFSCLPSKGIKIDVVAYTTMIKGLCKEGLLDDAENLLMKMEENGCLPNE 527

Query: 509 VTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEK 560
            T+N  + G LQ    S+  + L  M    + L  D TT  +++   + +++
Sbjct: 528 FTYNVFVRGLLQRYDISRSTKYLLLM--KGKGLSADATTTELLISYFSANKE 577



 Score =  119 bits (299), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 78/309 (25%), Positives = 144/309 (46%), Gaps = 3/309 (0%)

Query: 245 EEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSL 304
           E     F +M+ + P P    F  +   + K         L++ +   G+ PD +T   +
Sbjct: 53  EAALSFFHKMVVMNPLPREKDFTKLFGIIVKMKHYATTISLIKHIYSLGIKPDVYTLTII 112

Query: 305 MDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGV 364
           ++  C +        +   M   G   TVV++  LING C   NV  A      +   G 
Sbjct: 113 INCLCHLNHTVFGFSVLGVMFKIGVDPTVVTFATLINGLCAEGNVARAARFADSLEDMGH 172

Query: 365 RQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLS-TYNILIDGLCKNNCVQEAV 423
           +    TY  +++GL +AG    A    +++K  N + D+   Y+ ++D LCK+  V EA+
Sbjct: 173 QSNSYTYGAIINGLCKAGDTSGAILYLEKIKGRNCDLDVVIAYSTIMDSLCKDGMVCEAL 232

Query: 424 KLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGL 483
            LF  +     +  +  +N LI GLC  GR   A  L   + +KG++P V T+++++   
Sbjct: 233 NLFSGMTSKGIQPDLVAYNSLIHGLCNFGRWKEATTLLGNMMRKGIMPNVQTFNVLVDNF 292

Query: 484 CRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVP 543
           C+ G + +A   + +M   G  P+VVT+N+++ G    ++    V++   M    +  +P
Sbjct: 293 CKDGMISRAKTIMGFMVHVGVEPDVVTYNSVISGHCLLSQMGDAVKVFELMI--HKGFLP 350

Query: 544 DDTTFSIVV 552
           +  T+S ++
Sbjct: 351 NLVTYSSLI 359


>gi|357499049|ref|XP_003619813.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494828|gb|AES76031.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 614

 Score =  330 bits (847), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 187/513 (36%), Positives = 294/513 (57%), Gaps = 35/513 (6%)

Query: 51  SGIINLNEARYFFGYMTHMQ-PSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPD 109
           S I N+++A   F ++ HM+ P  PI  FN +  ++ K  H+   ISF +++    + PD
Sbjct: 39  SFIDNVDDAVSSFNHILHMRNPVQPIFEFNKILSSLVKLNHFHTAISFSKQMELKQIQPD 98

Query: 110 FLTLNILINCFGNKE----------------------------RGLCVENRIKEATWLFK 141
             T NILINCF +                              +GLC+  +++EA     
Sbjct: 99  LFTFNILINCFCHLGHLNFAFSVLAKIFKLGFHPDTVTITTLIKGLCLNGKVREALHFHD 158

Query: 142 NMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIID 201
           ++IA G   D ++YGTLING C+TG    AL++ +K+      +GL+ + N+  Y+ IID
Sbjct: 159 DVIAKGFHLDQVSYGTLINGLCKTGETRAALQVLRKI------DGLLVQPNVVMYNTIID 212

Query: 202 SLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRP 261
           SLCK+ LV  A +L  EM  + I P VV  TTLI+G    G  +E  GLF +ML    +P
Sbjct: 213 SLCKDKLVIHASDLCSEMIVKRIFPDVVTYTTLIYGCLIVGRLKEAVGLFNQMLLKNIKP 272

Query: 262 NLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIF 321
           ++ TFN+++D LCK G++ +A  +L +MI++G++ +  TYNSLMDGY LV + + A  +F
Sbjct: 273 DVYTFNILVDGLCKEGEMKKARNVLAVMIKQGVDSNIVTYNSLMDGYFLVKQENKATFVF 332

Query: 322 LSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQA 381
            +M  +G    V SY+I+ING CK   V+EA++L++++ S  +    +TYN+L+ GL + 
Sbjct: 333 NTMARRGVTPDVQSYSIMINGLCKTKMVDEAVNLFKEMHSKSMAPNTVTYNSLIDGLLKY 392

Query: 382 GQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIF 441
           G+   A  L +EM       D+ TY+ L+D LCKN+ V +A+ L   ++    +  I  +
Sbjct: 393 GRISDAWDLVNEMHNRGQPADVITYSSLLDALCKNHQVDKAITLITKIKDQGIQPNIYTY 452

Query: 442 NCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEK 501
             L+DGLCK GRL +A  ++  L  KG    V  Y++M++GLC++G  ++A   +  ME 
Sbjct: 453 TILVDGLCKNGRLKDAQAVYQDLLIKGYHLDVKMYNVMVNGLCKEGLFDEALSLVSKMED 512

Query: 502 NGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKM 534
           NGC P+ VT+ TL+    +N+K  K V+LL +M
Sbjct: 513 NGCIPDAVTYETLVRALFENDKNDKAVKLLREM 545



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 126/465 (27%), Positives = 223/465 (47%), Gaps = 45/465 (9%)

Query: 148 VRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEG 207
           V+P +  +  +++   +  +   A+   K+M     +       ++F+++I+I+  C  G
Sbjct: 61  VQP-IFEFNKILSSLVKLNHFHTAISFSKQMELKQIQ------PDLFTFNILINCFCHLG 113

Query: 208 LVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEE---------VNGLFIEMLDLG 258
            ++ A  +  ++   G +P  V  TTLI G C  G   E           G  ++ +  G
Sbjct: 114 HLNFAFSVLAKIFKLGFHPDTVTITTLIKGLCLNGKVREALHFHDDVIAKGFHLDQVSYG 173

Query: 259 P--------------------------RPNLLTFNVMIDCLCKGGKINEANGLLELMIQR 292
                                      +PN++ +N +ID LCK   +  A+ L   MI +
Sbjct: 174 TLINGLCKTGETRAALQVLRKIDGLLVQPNVVMYNTIIDSLCKDKLVIHASDLCSEMIVK 233

Query: 293 GLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEA 352
            + PD  TY +L+ G  +VGR+  A  +F  M  K  K  V ++NIL++G CK   +++A
Sbjct: 234 RIFPDVVTYTTLIYGCLIVGRLKEAVGLFNQMLLKNIKPDVYTFNILVDGLCKEGEMKKA 293

Query: 353 MSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDG 412
            ++   +I  GV   ++TYN+L+ G F   Q   A  +F+ M    V PD+ +Y+I+I+G
Sbjct: 294 RNVLAVMIKQGVDSNIVTYNSLMDGYFLVKQENKATFVFNTMARRGVTPDVQSYSIMING 353

Query: 413 LCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPT 472
           LCK   V EAV LF  +           +N LIDGL K GR+ +AW+L +++  +G    
Sbjct: 354 LCKTKMVDEAVNLFKEMHSKSMAPNTVTYNSLIDGLLKYGRISDAWDLVNEMHNRGQPAD 413

Query: 473 VVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLH 532
           V+TYS ++  LC+  +++KA   +  ++  G  PN+ T+  L+ G  +N +      +  
Sbjct: 414 VITYSSLLDALCKNHQVDKAITLITKIKDQGIQPNIYTYTILVDGLCKNGRLKDAQAVYQ 473

Query: 533 KMAEPERNLVPDDTTFSIVVDLLAKDEKYHEC-SAVSKSSYRACL 576
            +     +L  D   ++++V+ L K+  + E  S VSK     C+
Sbjct: 474 DLLIKGYHL--DVKMYNVMVNGLCKEGLFDEALSLVSKMEDNGCI 516


>gi|15222409|ref|NP_176529.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75205330|sp|Q9SH26.1|PP102_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63400
 gi|6633845|gb|AAF19704.1|AC008047_11 F2K11.22 [Arabidopsis thaliana]
 gi|332195974|gb|AEE34095.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 577

 Score =  330 bits (846), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 188/541 (34%), Positives = 279/541 (51%), Gaps = 71/541 (13%)

Query: 33  AVSSPETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYD 92
           A SS      E L     S  + L++A   FG M   +P P I  FN L  A+AK + +D
Sbjct: 45  AFSSGSGDYREILRNGLHS--MKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFD 102

Query: 93  AVISFYRKLVSIGLLPDFLTLNILINCFGNKER--------------------------- 125
            VIS   K+  +G+  +  T NILINCF  + +                           
Sbjct: 103 LVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLL 162

Query: 126 -GLCVENRIKEATWLFKNMIAFGVRPDVI------------------------------- 153
            G C   RI +A  L   M+  G RPD I                               
Sbjct: 163 NGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQ 222

Query: 154 ----TYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLV 209
               TYG ++NG C+ G++ +A  L  KM +   E       N+  YS +IDSLCK    
Sbjct: 223 PNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIE------ANVVIYSTVIDSLCKYRHE 276

Query: 210 DKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVM 269
           D A  LF EM+ +G+ P V+  ++LI   C    W + + L  +M++    PN++TFN +
Sbjct: 277 DDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNAL 336

Query: 270 IDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGC 329
           ID   K GK+ EA  L + MI+R ++PD FTY+SL++G+C+  R+D A+ +F  M SK C
Sbjct: 337 IDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDC 396

Query: 330 KHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQK 389
              VV+YN LING+CK   ++E + L+R++   G+    +TY TL+ G FQA     AQ 
Sbjct: 397 FPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQM 456

Query: 390 LFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLC 449
           +F +M    V P++ TYN L+DGLCKN  +++A+ +F  L+ +K E  I  +N +I+G+C
Sbjct: 457 VFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMC 516

Query: 450 KAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVV 509
           KAG++++ W+LF  L  KG+ P V+ Y+ MI G CRKG  E+A+     M ++G  P+  
Sbjct: 517 KAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDSG 576

Query: 510 T 510
           T
Sbjct: 577 T 577



 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 102/361 (28%), Positives = 191/361 (52%), Gaps = 2/361 (0%)

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
           +IF ++ ++ ++ K    D    L  +M+  GI+  +     LI+ FC          L 
Sbjct: 84  SIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALL 143

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
            +M+ LG  P+++T + +++  C G +I++A  L++ M++ G  PD  T+ +L+ G  L 
Sbjct: 144 GKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLH 203

Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
            +   A  +   M  +GC+  +V+Y +++NG CK  +++ A +L  ++ +  +   V+ Y
Sbjct: 204 NKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIY 263

Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
           +T++  L +      A  LF EM+   V P++ TY+ LI  LC      +A +L   +  
Sbjct: 264 STVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIE 323

Query: 432 NKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEK 491
            K    +  FN LID   K G+L  A +L+ ++ ++ + P + TYS +I+G C   +L++
Sbjct: 324 RKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDE 383

Query: 492 ANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIV 551
           A      M    C PNVVT+NTL++GF +  +  + VEL  +M+  +R LV +  T++ +
Sbjct: 384 AKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMS--QRGLVGNTVTYTTL 441

Query: 552 V 552
           +
Sbjct: 442 I 442



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 100/319 (31%), Positives = 171/319 (53%), Gaps = 2/319 (0%)

Query: 245 EEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSL 304
           ++  GLF  M+   P P++  FN ++  + K  K +    L E M + G++ + +TYN L
Sbjct: 67  DDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNIL 126

Query: 305 MDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGV 364
           ++ +C   +I  A  +   M   G + ++V+ + L+NGYC    + +A++L  Q++  G 
Sbjct: 127 INCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGY 186

Query: 365 RQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVK 424
           R   IT+ TL+ GLF   +A  A  L D M     +P+L TY ++++GLCK   +  A  
Sbjct: 187 RPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFN 246

Query: 425 LFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLC 484
           L + +E  K E  + I++ +ID LCK    D+A  LF ++  KG+ P V+TYS +I  LC
Sbjct: 247 LLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLC 306

Query: 485 RKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPD 544
              +   A+  L  M +    PNVVTFN L+  F++  K  +  +L  +M   +R++ PD
Sbjct: 307 NYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMI--KRSIDPD 364

Query: 545 DTTFSIVVDLLAKDEKYHE 563
             T+S +++     ++  E
Sbjct: 365 IFTYSSLINGFCMHDRLDE 383



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 60/222 (27%), Positives = 113/222 (50%), Gaps = 7/222 (3%)

Query: 338 ILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLY 397
           IL NG    + +++A+ L+  ++ +    ++  +N LLS + +  +      L ++M+  
Sbjct: 56  ILRNGL-HSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRL 114

Query: 398 NVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNA 457
            +  +L TYNILI+  C+ + +  A+ L   +    +E  I   + L++G C   R+ +A
Sbjct: 115 GISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDA 174

Query: 458 WELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHG 517
             L  ++ + G  P  +T++ +IHGL    K  +A   +  M + GC PN+VT+  +++G
Sbjct: 175 VALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNG 234

Query: 518 FLQNNKTSKVVELLHKM--AEPERNLVPDDTTFSIVVDLLAK 557
             +         LL+KM  A+ E N+V     +S V+D L K
Sbjct: 235 LCKRGDIDLAFNLLNKMEAAKIEANVV----IYSTVIDSLCK 272


>gi|357499681|ref|XP_003620129.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495144|gb|AES76347.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 543

 Score =  330 bits (846), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 178/514 (34%), Positives = 289/514 (56%), Gaps = 37/514 (7%)

Query: 37  PETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVIS 96
           P + ++   H N      ++ +A   F  +    P+PP   FN + G++ K++HY  V+S
Sbjct: 43  PYSSISTTFHNNN-----DVVDAFSLFSRLLRQNPTPPAIEFNKILGSLVKSKHYHTVLS 97

Query: 97  FYRKL----------------VSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLF 140
             +++                  +G  P+ +T   LI       +GLC++ +I +A    
Sbjct: 98  LSQQMEFEGINPVLFHFQHPHQLMGYHPNTITFTTLI-------KGLCLKGQIHQALLFH 150

Query: 141 KNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIII 200
            N++A G + D + YGTLI+G C+ G    AL L +++      +G + + N+  YS II
Sbjct: 151 DNVVAMGFQLDQVGYGTLIHGLCKVGETRAALDLLRRV------DGNLVQPNVVMYSTII 204

Query: 201 DSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPR 260
           D +CK+  V+ A +L+ EM  +GI+P VV  + LI GF   G  ++   LF +M+    +
Sbjct: 205 DGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGQLKDAIDLFNKMILENIK 264

Query: 261 PNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREI 320
           P++ TFN+++D  CK GK+ E   +  +M+++G+ P+  TY SLMDGYCLV  ++ A+ I
Sbjct: 265 PDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKEVNKAKSI 324

Query: 321 FLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQ 380
             +M  +G    + SYNILI+G+CKI  V+EAM+L++++    +   V+TYN+L+ GL +
Sbjct: 325 LYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLFKEMHHKHIIPDVVTYNSLIDGLCK 384

Query: 381 AGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEI 440
            G+  YA KL DEM    V PD+ TY+ ++D LCKN+ V +A+ L   L+       +  
Sbjct: 385 LGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQGIRPNMYT 444

Query: 441 FNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYME 500
           +  LIDGLCK GRL++A  +F  L  KG   TV TY++MIHG C KG  ++A   L  M+
Sbjct: 445 YTILIDGLCKGGRLEDAHNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEALALLSKMK 504

Query: 501 KNGCAPNVVTFNTLMHGFL---QNNKTSKVVELL 531
            N C P+ VT+  ++       +N+K  K+ E++
Sbjct: 505 DNSCIPDAVTYEIIIRSLFDKDENDKAEKLREMI 538



 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 108/372 (29%), Positives = 196/372 (52%), Gaps = 21/372 (5%)

Query: 196 YSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEML 255
           ++ I+ SL K         L  +M+  GINP +              +++  + L     
Sbjct: 79  FNKILGSLVKSKHYHTVLSLSQQMEFEGINPVLF-------------HFQHPHQL----- 120

Query: 256 DLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRID 315
            +G  PN +TF  +I  LC  G+I++A    + ++  G   D+  Y +L+ G C VG   
Sbjct: 121 -MGYHPNTITFTTLIKGLCLKGQIHQALLFHDNVVAMGFQLDQVGYGTLIHGLCKVGETR 179

Query: 316 TAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLL 375
            A ++   +     +  VV Y+ +I+G CK  +V +A  LY +++S G+   V+TY+ L+
Sbjct: 180 AALDLLRRVDGNLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALI 239

Query: 376 SGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFE 435
           SG F  GQ   A  LF++M L N++PD+ T+NIL+DG CK+  ++E   +F M+     +
Sbjct: 240 SGFFTVGQLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIK 299

Query: 436 FGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDF 495
             +  +  L+DG C    ++ A  + + + Q+G+ P + +Y+I+I G C+  K+++A + 
Sbjct: 300 PNVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNL 359

Query: 496 LLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLL 555
              M      P+VVT+N+L+ G  +  K S  ++L+ +M +  R + PD  T+S ++D L
Sbjct: 360 FKEMHHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHD--RGVPPDIITYSSILDAL 417

Query: 556 AKDEKYHECSAV 567
            K+ +  +  A+
Sbjct: 418 CKNHQVDKAIAL 429



 Score =  115 bits (289), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 72/239 (30%), Positives = 126/239 (52%), Gaps = 14/239 (5%)

Query: 56  LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNI 115
           +N+A+     M+    +P I S+N+L     K +  D  ++ ++++    ++PD +T N 
Sbjct: 318 VNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLFKEMHHKHIIPDVVTYNS 377

Query: 116 LINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLH 175
           LI+       GLC   +I  A  L   M   GV PD+ITY ++++  C+   +  A+ L 
Sbjct: 378 LID-------GLCKLGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALL 430

Query: 176 KKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLI 235
            K+     + G+  + N+++Y+I+ID LCK G ++ A  +F ++  +G N  V   T +I
Sbjct: 431 TKL----KDQGI--RPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVKGYNITVNTYTVMI 484

Query: 236 HGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGL 294
           HGFC  G ++E   L  +M D    P+ +T+ ++I  L    + ++A  L E MI RGL
Sbjct: 485 HGFCNKGLFDEALALLSKMKDNSCIPDAVTYEIIIRSLFDKDENDKAEKLRE-MITRGL 542



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 69/238 (28%), Positives = 109/238 (45%), Gaps = 22/238 (9%)

Query: 348 NVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEM------------- 394
           +V +A SL+ +++        I +N +L  L ++        L  +M             
Sbjct: 56  DVVDAFSLFSRLLRQNPTPPAIEFNKILGSLVKSKHYHTVLSLSQQMEFEGINPVLFHFQ 115

Query: 395 ---KLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFH--MLEMNKFEFGIEIFNCLIDGLC 449
              +L    P+  T+  LI GLC    + +A+ LFH  ++ M  F+     +  LI GLC
Sbjct: 116 HPHQLMGYHPNTITFTTLIKGLCLKGQIHQAL-LFHDNVVAMG-FQLDQVGYGTLIHGLC 173

Query: 450 KAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVV 509
           K G    A +L  ++    + P VV YS +I G+C+   +  A D    M   G +PNVV
Sbjct: 174 KVGETRAALDLLRRVDGNLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVV 233

Query: 510 TFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAV 567
           T++ L+ GF    +    ++L +KM     N+ PD  TF+I+VD   KD K  E   V
Sbjct: 234 TYSALISGFFTVGQLKDAIDLFNKMIL--ENIKPDVYTFNILVDGFCKDGKMKEGKTV 289


>gi|358344944|ref|XP_003636545.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355502480|gb|AES83683.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1280

 Score =  328 bits (842), Expect = 4e-87,   Method: Compositional matrix adjust.
 Identities = 180/487 (36%), Positives = 276/487 (56%), Gaps = 21/487 (4%)

Query: 63  FGYMTHMQPSPPISSFNLLFGAVAKNR-HYDAVISFYRKLVSIGLLPDFLTLNILINCFG 121
           F  M  ++ +P I  FN +   + K + HY  V+S   ++ S G+ PD  TL+ILINC+ 
Sbjct: 54  FNRMRQIRQTPSIVEFNKILTYLIKTKNHYPTVLSLSTQMESKGVKPDLFTLSILINCYC 113

Query: 122 NK--------------ERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGN 167
           +               + GLC+  ++ EA     +++A G   + +TYG LING C+ G 
Sbjct: 114 HLGQMTFAFSVFAKILKMGLCLNGKVNEALLFHDHVLALGFHLNHVTYGILINGLCKMGQ 173

Query: 168 LSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPA 227
              AL++ +++       G +  TN+  YS IID LCK+ LV  A  L+ EM  + I P 
Sbjct: 174 TRAALQVLRQI------EGKLVNTNVVMYSTIIDGLCKDKLVTDAYGLYSEMIVKRIPPT 227

Query: 228 VVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLE 287
           VV  ++LI+GFC  G +++   LF EM+     P+  TFN+++D LCK GKI EA  ++ 
Sbjct: 228 VVTFSSLIYGFCIVGKFKDAFRLFNEMVMKNINPDAYTFNILVDALCKEGKIKEAKNVIA 287

Query: 288 LMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKIL 347
           +M++ G+ P   TYN+LMDGYCLV  +  A+ +   +          SYNI+ING+CKI 
Sbjct: 288 VMMKEGVEPTVVTYNTLMDGYCLVNEVGKAKHVLSIISRMRVAPNSRSYNIMINGFCKIK 347

Query: 348 NVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYN 407
            V+EA+ L+ ++   G+    +TYN+L+ GL +AG+  YA +L DEM    +  D+ TYN
Sbjct: 348 MVDEALCLFHEMCCRGIAPHKVTYNSLIDGLCKAGRIPYAWELVDEMHNNCIPADIVTYN 407

Query: 408 ILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQK 467
            LID  CKN  V +A+ L   ++ +  +  +  +N LIDGLCK G+L NA ++F  L  K
Sbjct: 408 SLIDVFCKNQHVDKAIALVKKIKEHGIQPNMCTYNILIDGLCKGGQLKNAQDVFQDLLIK 467

Query: 468 GLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKV 527
           G      TY+IMI+GLC++G  ++A   L  ME NG  P+ VT+ T++      ++  K 
Sbjct: 468 GYNVNAWTYNIMINGLCKEGLFDEAEVLLSKMEDNGIIPDAVTYETIIQALFHKDENEKA 527

Query: 528 VELLHKM 534
            +LL +M
Sbjct: 528 QKLLREM 534



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 78/261 (29%), Positives = 118/261 (45%), Gaps = 29/261 (11%)

Query: 314 IDTAREIFLSMHSKGCKHTVVSYNILINGYCKILN-VEEAMSLYRQIISNGVRQTVITYN 372
           +D A   F  M       ++V +N ++    K  N     +SL  Q+ S GV+  + T +
Sbjct: 47  VDNAVLSFNRMRQIRQTPSIVEFNKILTYLIKTKNHYPTVLSLSTQMESKGVKPDLFTLS 106

Query: 373 TLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFH----- 427
            L++     GQ  +A  +F +              IL  GLC N  V EA+ LFH     
Sbjct: 107 ILINCYCHLGQMTFAFSVFAK--------------ILKMGLCLNGKVNEAL-LFHDHVLA 151

Query: 428 -MLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRK 486
               +N   +GI     LI+GLCK G+   A ++  ++  K +   VV YS +I GLC+ 
Sbjct: 152 LGFHLNHVTYGI-----LINGLCKMGQTRAALQVLRQIEGKLVNTNVVMYSTIIDGLCKD 206

Query: 487 GKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDT 546
             +  A      M      P VVTF++L++GF    K      L ++M    +N+ PD  
Sbjct: 207 KLVTDAYGLYSEMIVKRIPPTVVTFSSLIYGFCIVGKFKDAFRLFNEMVM--KNINPDAY 264

Query: 547 TFSIVVDLLAKDEKYHECSAV 567
           TF+I+VD L K+ K  E   V
Sbjct: 265 TFNILVDALCKEGKIKEAKNV 285


>gi|357499975|ref|XP_003620276.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495291|gb|AES76494.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 590

 Score =  328 bits (841), Expect = 5e-87,   Method: Compositional matrix adjust.
 Identities = 171/508 (33%), Positives = 288/508 (56%), Gaps = 34/508 (6%)

Query: 55  NLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLN 114
           ++++A   F  +     +PP   FN + G++ K++HY  V+   +K+   G+ P+ +  N
Sbjct: 65  DVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCN 124

Query: 115 ILINCF----------------------------GNKERGLCVENRIKEATWLFKNMIAF 146
           ILINCF                                +GLC++ +I++A      ++A 
Sbjct: 125 ILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLCLKGQIQQAFLFHDKVVAL 184

Query: 147 GVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKE 206
           G   D I+YGTLI+G C+ G    AL L +++      +G + + N+  Y+ IIDS+CK 
Sbjct: 185 GFHFDQISYGTLIHGLCKVGETRAALDLLQRV------DGNLVQPNVVMYNTIIDSMCKV 238

Query: 207 GLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTF 266
            LV++A +LF EM  +GI+P VV  + LI GFC  G  ++   LF +M+    +P++ TF
Sbjct: 239 KLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMILENIKPDVYTF 298

Query: 267 NVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHS 326
           N++++  CK GK+ E   + ++M+++G+ P+  TYNSLMDGYCLV  ++ A+ IF +M  
Sbjct: 299 NILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQ 358

Query: 327 KGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGY 386
            G    + SY+I+ING+CKI   +EAM+L++++    +   V+TY++L+ GL ++G+  Y
Sbjct: 359 GGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISY 418

Query: 387 AQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLID 446
           A +L D+M    V P++ TYN ++D LCK + V +A+ L    +   F+  I  ++ LI 
Sbjct: 419 ALQLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSILIK 478

Query: 447 GLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAP 506
           GLC++G+L++A ++F  L  KG    V  Y+IMI G C +G   +A   L  ME NGC P
Sbjct: 479 GLCQSGKLEDARKVFEDLLVKGYNLDVYAYTIMIQGFCVEGLFNEALALLSKMEDNGCIP 538

Query: 507 NVVTFNTLMHGFLQNNKTSKVVELLHKM 534
           +  T+  ++    + ++     +LL +M
Sbjct: 539 DAKTYEIIILSLFKKDENDMAEKLLREM 566



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 112/414 (27%), Positives = 199/414 (48%), Gaps = 37/414 (8%)

Query: 189 SKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVN 248
           SK N  SYS    +      VD A  LF  +  R   P       ++     + ++  V 
Sbjct: 46  SKINFISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVL 105

Query: 249 GLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGY 308
            L  +M   G +PNL+  N++I+C C+ G I  A  +   +++ G  PD  T+ +L  G 
Sbjct: 106 YLSQKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGL 165

Query: 309 CLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILN-------------------- 348
           CL G+I  A      + + G     +SY  LI+G CK+                      
Sbjct: 166 CLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNV 225

Query: 349 ---------------VEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDE 393
                          V EA  L+ +++S G+   V+TY+ L+SG    G+   A  LF++
Sbjct: 226 VMYNTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNK 285

Query: 394 MKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGR 453
           M L N++PD+ T+NIL++  CK+  ++E   +F M+     +     +N L+DG C    
Sbjct: 286 MILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKE 345

Query: 454 LDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNT 513
           ++ A  +F+ + Q G+ P + +YSIMI+G C+  K ++A +    M +    P+VVT+++
Sbjct: 346 VNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSS 405

Query: 514 LMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAV 567
           L+ G  ++ + S  ++L+ +M   +R + P+  T++ ++D L K  +  +  A+
Sbjct: 406 LIDGLSKSGRISYALQLVDQMH--DRGVPPNICTYNSILDALCKTHQVDKAIAL 457


>gi|147768815|emb|CAN62672.1| hypothetical protein VITISV_031896 [Vitis vinifera]
          Length = 530

 Score =  327 bits (839), Expect = 9e-87,   Method: Compositional matrix adjust.
 Identities = 178/441 (40%), Positives = 251/441 (56%), Gaps = 34/441 (7%)

Query: 56  LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNI 115
           L++A   F  M HM P P    F  L  ++AK +HY  V+S   ++ S G+ PD  TLNI
Sbjct: 93  LDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNI 152

Query: 116 LINCFGNKER----------------------------GLCVENRIKEATWLFKNMIAFG 147
           LIN F +  R                            GLCVE +I EA  LF   I  G
Sbjct: 153 LINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEG 212

Query: 148 VRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEG 207
            +PDV+TYGTL+NG C+ GN S A+RL + MV  +       + N+ +Y+ IIDSLCK+ 
Sbjct: 213 FQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKN------CRPNVIAYNTIIDSLCKDR 266

Query: 208 LVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFN 267
            V +A  LF EM  +GI+P +    +LIH  C    W+ V  L  EM++    PN++ F+
Sbjct: 267 QVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFS 326

Query: 268 VMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSK 327
            ++D LCK G I  A+ ++++MI+RG+ PD  TY +LMDG+CL   +D A ++F +M  K
Sbjct: 327 TVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHK 386

Query: 328 GCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYA 387
           GC   V SYNILINGYC+I  +++AM L  Q+   G+    +TYNTL+ GL   G+  +A
Sbjct: 387 GCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHA 446

Query: 388 QKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDG 447
             LF EM      PDL TY IL+D LCKN+ + EA+ L   +E +  +  I ++N  IDG
Sbjct: 447 IALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDG 506

Query: 448 LCKAGRLDNAWELFHKLPQKG 468
           +C+AG L+ A +LF  L  +G
Sbjct: 507 MCRAGELEAARDLFSNLSCQG 527



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 119/399 (29%), Positives = 193/399 (48%), Gaps = 15/399 (3%)

Query: 172 LRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVC 231
           L +H    + D+   L S   +  YS ++              L  +M   GI P V   
Sbjct: 104 LHMHPPPSTVDFTKLLTSIAKMKHYSTVL-------------SLSTQMDSFGIPPDVYTL 150

Query: 232 TTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQ 291
             LI+ FC          +  ++L LG +P+  TFN +I  LC  GKI EA  L +  I 
Sbjct: 151 NILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIG 210

Query: 292 RGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEE 351
            G  PD  TY +LM+G C VG    A  +  SM  K C+  V++YN +I+  CK   V E
Sbjct: 211 EGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTE 270

Query: 352 AMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILID 411
           A +L+ ++I+ G+   + TYN+L+  L    +  +   L +EM    + P++  ++ ++D
Sbjct: 271 AFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVD 330

Query: 412 GLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVP 471
            LCK   +  A  +  M+     E  +  +  L+DG C    +D A ++F  +  KG VP
Sbjct: 331 ALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVP 390

Query: 472 TVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELL 531
            V +Y+I+I+G C+  +++KA   L  M   G   + VT+NTL+HG     +    + L 
Sbjct: 391 NVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALF 450

Query: 532 HKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKS 570
           H+M    +  +PD  T+ I++D L K+    E   + K+
Sbjct: 451 HEMVASGQ--IPDLVTYRILLDYLCKNHHLAEAMVLLKA 487



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 114/423 (26%), Positives = 206/423 (48%), Gaps = 8/423 (1%)

Query: 131 NRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISK 190
           N + +A   F  M+     P  + +  L+    +  + S  L L  +M S          
Sbjct: 91  NTLDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGI------P 144

Query: 191 TNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGL 250
            ++++ +I+I+S C    +  A  +  ++   G  P      TLI G C  G   E   L
Sbjct: 145 PDVYTLNILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHL 204

Query: 251 FIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCL 310
           F + +  G +P+++T+  +++ LCK G  + A  LL  M+Q+   P+   YN+++D  C 
Sbjct: 205 FDKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCK 264

Query: 311 VGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVIT 370
             ++  A  +F  M +KG    + +YN LI+  C +   +   +L  +++++ +   V+ 
Sbjct: 265 DRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVV 324

Query: 371 YNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLE 430
           ++T++  L + G    A  + D M    VEPD+ TY  L+DG C  + + EAVK+F  + 
Sbjct: 325 FSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMV 384

Query: 431 MNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLE 490
                  +  +N LI+G C+  R+D A  L  ++  +GL+   VTY+ +IHGLC  G+L+
Sbjct: 385 HKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQ 444

Query: 491 KANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSI 550
            A      M  +G  P++VT+  L+    +N+  ++ + LL   A    NL  D   ++I
Sbjct: 445 HAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLK--AIEGSNLDADILVYNI 502

Query: 551 VVD 553
            +D
Sbjct: 503 AID 505



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 69/245 (28%), Positives = 117/245 (47%), Gaps = 2/245 (0%)

Query: 314 IDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNT 373
           +D A   F  M       + V +  L+    K+ +    +SL  Q+ S G+   V T N 
Sbjct: 93  LDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNI 152

Query: 374 LLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNK 433
           L++      + GYA  +  ++     +PD +T+N LI GLC    + EA+ LF       
Sbjct: 153 LINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEG 212

Query: 434 FEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKAN 493
           F+  +  +  L++GLCK G    A  L   + QK   P V+ Y+ +I  LC+  ++ +A 
Sbjct: 213 FQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAF 272

Query: 494 DFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
           +    M   G +P++ T+N+L+H      +   V  LL++M   +  ++P+   FS VVD
Sbjct: 273 NLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSK--IMPNVVVFSTVVD 330

Query: 554 LLAKD 558
            L K+
Sbjct: 331 ALCKE 335


>gi|356502394|ref|XP_003520004.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 525

 Score =  327 bits (839), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 188/522 (36%), Positives = 279/522 (53%), Gaps = 39/522 (7%)

Query: 69  MQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLC 128
           M P PP   F  LFG + K +HY   IS  +   S+G+ PD  TL I+INC       LC
Sbjct: 1   MNPLPPDKDFATLFGVIVKMKHYATAISLIKHTYSLGVKPDVHTLTIVINC-------LC 53

Query: 129 VENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYE---- 184
                     +   M   GV P V+T+ TLING C  GN+  A R    +    YE    
Sbjct: 54  HLKHTVFGFSVLGAMFKIGVEPTVVTFATLINGLCAEGNVGAAARFADSLEDMGYESNSY 113

Query: 185 ------NGL---------------ISKTN-----IFSYSIIIDSLCKEGLVDKAKELFLE 218
                 NGL               I   N     + +YS I+DSLCK+G++  A   F  
Sbjct: 114 THGTIINGLCKVGDTAGAISYLEKIEGRNRGFDLLIAYSTIMDSLCKDGMLCLALNFFSG 173

Query: 219 MKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGK 278
           M  +GI P +V   +LIHG C  G W E   L   M+  G  PN+ TFNV++D  CK GK
Sbjct: 174 MTCKGIQPDLVAYNSLIHGLCSFGRWNEATTLLGNMMRKGIMPNVQTFNVLVDNFCKEGK 233

Query: 279 INEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNI 338
           I+ A  ++  M+  G+ PD  TYNS++ G+CL+ +++ A ++F  M  KG    VV+Y+ 
Sbjct: 234 ISRAKTIMCFMVHVGVEPDVVTYNSVISGHCLLSQMNDAVKVFELMIHKGLLPNVVTYSS 293

Query: 339 LINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYN 398
           LI+G+CK  N+ +A+ +  ++++NG+   V+T++TL+ G  +AG+   A +LF  M  ++
Sbjct: 294 LIHGWCKTRNINKAIFVLDEMVNNGLNLDVVTWSTLIGGFCKAGRPEAAIELFCTMHEHH 353

Query: 399 VEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAW 458
             P+L T  I++DGL K     EA+ LF  +E    E  I  +N ++DG+C  G+ ++A 
Sbjct: 354 QLPNLQTCAIILDGLFKCQFHSEAISLFRKMEKMNLELNIVTYNIVLDGMCSFGKFNDAR 413

Query: 459 ELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGF 518
           ELF  LP KG+   VV Y+ MI GLC++G L+ A D L+ ME+NGC PN  T+N L+ G 
Sbjct: 414 ELFSCLPSKGIQIDVVAYTTMIKGLCKEGLLDDAEDLLMKMEENGCPPNEFTYNVLVRGL 473

Query: 519 LQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEK 560
           LQ    S+  + L  M    + L  D TT  +++   + +++
Sbjct: 474 LQRYDISRSTKYL--MLMKGKGLSADATTTELLISYFSANKE 513



 Score =  162 bits (409), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 115/368 (31%), Positives = 181/368 (49%), Gaps = 15/368 (4%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CK G++ L  A  FF  MT     P + ++N L   +     ++   +    ++  G++P
Sbjct: 159 CKDGMLCL--ALNFFSGMTCKGIQPDLVAYNSLIHGLCSFGRWNEATTLLGNMMRKGIMP 216

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           +  T N+L++ F       C E +I  A  +   M+  GV PDV+TY ++I+G C    +
Sbjct: 217 NVQTFNVLVDNF-------CKEGKISRAKTIMCFMVHVGVEPDVVTYNSVISGHCLLSQM 269

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
           + A+++ + M+      GL+   N+ +YS +I   CK   ++KA  +  EM   G+N  V
Sbjct: 270 NDAVKVFELMI----HKGLLP--NVVTYSSLIHGWCKTRNINKAIFVLDEMVNNGLNLDV 323

Query: 229 VVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLEL 288
           V  +TLI GFC AG  E    LF  M +    PNL T  +++D L K    +EA  L   
Sbjct: 324 VTWSTLIGGFCKAGRPEAAIELFCTMHEHHQLPNLQTCAIILDGLFKCQFHSEAISLFRK 383

Query: 289 MIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILN 348
           M +  L  +  TYN ++DG C  G+ + ARE+F  + SKG +  VV+Y  +I G CK   
Sbjct: 384 MEKMNLELNIVTYNIVLDGMCSFGKFNDARELFSCLPSKGIQIDVVAYTTMIKGLCKEGL 443

Query: 349 VEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNI 408
           +++A  L  ++  NG      TYN L+ GL Q      + K    MK   +  D +T  +
Sbjct: 444 LDDAEDLLMKMEENGCPPNEFTYNVLVRGLLQRYDISRSTKYLMLMKGKGLSADATTTEL 503

Query: 409 LIDGLCKN 416
           LI     N
Sbjct: 504 LISYFSAN 511



 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 96/351 (27%), Positives = 172/351 (49%), Gaps = 18/351 (5%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
           N  +H  C  G    NEA    G M      P + +FN+L     K        +    +
Sbjct: 187 NSLIHGLCSFG--RWNEATTLLGNMMRKGIMPNVQTFNVLVDNFCKEGKISRAKTIMCFM 244

Query: 102 VSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLING 161
           V +G+ PD +T N +I+       G C+ +++ +A  +F+ MI  G+ P+V+TY +LI+G
Sbjct: 245 VHVGVEPDVVTYNSVIS-------GHCLLSQMNDAVKVFELMIHKGLLPNVVTYSSLIHG 297

Query: 162 FCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKG 221
           +C+T N++ A+ +  +MV+    NGL    ++ ++S +I   CK G  + A ELF  M  
Sbjct: 298 WCKTRNINKAIFVLDEMVN----NGL--NLDVVTWSTLIGGFCKAGRPEAAIELFCTMHE 351

Query: 222 RGINPAVVVCTTLIHG-FCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKIN 280
               P +  C  ++ G F C  + E ++ LF +M  +    N++T+N+++D +C  GK N
Sbjct: 352 HHQLPNLQTCAIILDGLFKCQFHSEAIS-LFRKMEKMNLELNIVTYNIVLDGMCSFGKFN 410

Query: 281 EANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILI 340
           +A  L   +  +G+  D   Y +++ G C  G +D A ++ + M   GC     +YN+L+
Sbjct: 411 DARELFSCLPSKGIQIDVVAYTTMIKGLCKEGLLDDAEDLLMKMEENGCPPNEFTYNVLV 470

Query: 341 NGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLF 391
            G  +  ++  +      +   G+     T   L+S  F A +   A ++F
Sbjct: 471 RGLLQRYDISRSTKYLMLMKGKGLSADATTTELLIS-YFSANKENSALQVF 520



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 62/237 (26%), Positives = 107/237 (45%), Gaps = 9/237 (3%)

Query: 345 KILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLS 404
           K+ +   A+SL +   S GV+  V T   +++ L       +   +   M    VEP + 
Sbjct: 19  KMKHYATAISLIKHTYSLGVKPDVHTLTIVINCLCHLKHTVFGFSVLGAMFKIGVEPTVV 78

Query: 405 TYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKL 464
           T+  LI+GLC    V  A +    LE   +E        +I+GLCK G    A     K+
Sbjct: 79  TFATLINGLCAEGNVGAAARFADSLEDMGYESNSYTHGTIINGLCKVGDTAGAISYLEKI 138

Query: 465 PQKGL-VPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNK 523
             +      ++ YS ++  LC+ G L  A +F   M   G  P++V +N+L+HG     +
Sbjct: 139 EGRNRGFDLLIAYSTIMDSLCKDGMLCLALNFFSGMTCKGIQPDLVAYNSLIHGLCSFGR 198

Query: 524 TSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKSSYRACLYVTI 580
            ++   LL  M    + ++P+  TF+++VD   K+ K      +S++    C  V +
Sbjct: 199 WNEATTLLGNMMR--KGIMPNVQTFNVLVDNFCKEGK------ISRAKTIMCFMVHV 247


>gi|145336957|ref|NP_176459.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75206054|sp|Q9SI78.1|PPR93_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62720
 gi|6630449|gb|AAF19537.1|AC007190_5 F23N19.8 [Arabidopsis thaliana]
 gi|62320514|dbj|BAD95075.1| PPR-repeat protein [Arabidopsis thaliana]
 gi|332195876|gb|AEE33997.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 485

 Score =  326 bits (835), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 176/457 (38%), Positives = 265/457 (57%), Gaps = 16/457 (3%)

Query: 50  KSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPD 109
           K   +NL E    F  M   +P P I  F+ +   +AK+++YD VIS +  +   G+  D
Sbjct: 44  KRSSMNLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHD 103

Query: 110 FLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLS 169
             + NI+INC       LC  +R   A  +   M+ FG  PDV+T  +LINGFC+   + 
Sbjct: 104 LYSYNIVINC-------LCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVF 156

Query: 170 VALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVV 229
            A+ L  KM     E G   + ++  Y+ IID  CK GLV+ A ELF  M+  G+    V
Sbjct: 157 DAIDLVSKM----EEMGF--RPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAV 210

Query: 230 VCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELM 289
              +L+ G CC+G W +   L  +M+     PN++TF  +ID   K GK +EA  L E M
Sbjct: 211 TYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEM 270

Query: 290 IQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNV 349
            +R ++PD FTYNSL++G C+ GR+D A+++   M +KGC   VV+YN LING+CK   V
Sbjct: 271 TRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRV 330

Query: 350 EEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNIL 409
           +E   L+R++   G+    ITYNT++ G FQAG+   AQ++F  M   +  P++ TY+IL
Sbjct: 331 DEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRM---DSRPNIRTYSIL 387

Query: 410 IDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGL 469
           + GLC N  V++A+ LF  ++ ++ E  I  +N +I G+CK G +++AW+LF  L  KGL
Sbjct: 388 LYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGL 447

Query: 470 VPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAP 506
            P VV+Y+ MI G CRK + +K++     M+++G  P
Sbjct: 448 KPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484



 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 128/450 (28%), Positives = 210/450 (46%), Gaps = 44/450 (9%)

Query: 120 FGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRL-HKKM 178
           F  K   + +E  I     LF  MI     P ++ +  +++   ++ N  + + L H   
Sbjct: 41  FSTKRSSMNLEEEID----LFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHME 96

Query: 179 VSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGF 238
           V G          +++SY+I+I+ LC+      A  +  +M   G  P VV  ++LI+GF
Sbjct: 97  VCG-------IGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGF 149

Query: 239 CCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDR 298
           C      +   L  +M ++G RP+++ +N +ID  CK G +N+A  L + M + G+  D 
Sbjct: 150 CQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADA 209

Query: 299 FTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQ 358
            TYNSL+ G C  GR   A  +   M  +     V+++  +I+ + K     EAM LY +
Sbjct: 210 VTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEE 269

Query: 359 IISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNC 418
           +    V   V TYN+L++GL   G+   A+++ D M      PD+ TYN LI+G CK+  
Sbjct: 270 MTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKR 329

Query: 419 VQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPT------ 472
           V E  KLF  +           +N +I G  +AGR D A E+F ++  +  + T      
Sbjct: 330 VDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRPNIRTYSILLY 389

Query: 473 --------------------------VVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAP 506
                                     + TY+I+IHG+C+ G +E A D    +   G  P
Sbjct: 390 GLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKP 449

Query: 507 NVVTFNTLMHGFLQNNKTSKVVELLHKMAE 536
           +VV++ T++ GF +  +  K   L  KM E
Sbjct: 450 DVVSYTTMISGFCRKRQWDKSDLLYRKMQE 479



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 98/339 (28%), Positives = 185/339 (54%), Gaps = 5/339 (1%)

Query: 214 ELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCL 273
           +LF +M      P++V  + ++     + N++ V  LF  M   G   +L ++N++I+CL
Sbjct: 55  DLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCL 114

Query: 274 CKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTV 333
           C+  +   A  ++  M++ G  PD  T +SL++G+C   R+  A ++   M   G +  V
Sbjct: 115 CRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDV 174

Query: 334 VSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDE 393
           V YN +I+G CKI  V +A+ L+ ++  +GVR   +TYN+L++GL  +G+   A +L  +
Sbjct: 175 VIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRD 234

Query: 394 MKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGR 453
           M + ++ P++ T+  +ID   K     EA+KL+  +     +  +  +N LI+GLC  GR
Sbjct: 235 MVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGR 294

Query: 454 LDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNT 513
           +D A ++   +  KG +P VVTY+ +I+G C+  ++++       M + G   + +T+NT
Sbjct: 295 VDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNT 354

Query: 514 LMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVV 552
           ++ G+ Q  +     E+  +M        P+  T+SI++
Sbjct: 355 IIQGYFQAGRPDAAQEIFSRMDSR-----PNIRTYSILL 388



 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 94/310 (30%), Positives = 163/310 (52%), Gaps = 2/310 (0%)

Query: 243 NWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYN 302
           N EE   LF +M+   P P+++ F+ ++  + K    +    L   M   G+  D ++YN
Sbjct: 49  NLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYN 108

Query: 303 SLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISN 362
            +++  C   R   A  +   M   G +  VV+ + LING+C+   V +A+ L  ++   
Sbjct: 109 IVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEM 168

Query: 363 GVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEA 422
           G R  V+ YNT++ G  + G    A +LFD M+   V  D  TYN L+ GLC +    +A
Sbjct: 169 GFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDA 228

Query: 423 VKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHG 482
            +L   + M      +  F  +ID   K G+   A +L+ ++ ++ + P V TY+ +I+G
Sbjct: 229 ARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLING 288

Query: 483 LCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLV 542
           LC  G++++A   L  M   GC P+VVT+NTL++GF ++ +  +  +L  +MA  +R LV
Sbjct: 289 LCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMA--QRGLV 346

Query: 543 PDDTTFSIVV 552
            D  T++ ++
Sbjct: 347 GDTITYNTII 356



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 67/242 (27%), Positives = 132/242 (54%), Gaps = 6/242 (2%)

Query: 347 LNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTY 406
           +N+EE + L+ ++I +    +++ ++ +LS + ++        LF  M++  +  DL +Y
Sbjct: 48  MNLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSY 107

Query: 407 NILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEI--FNCLIDGLCKAGRLDNAWELFHKL 464
           NI+I+ LC+  C +  + L  + +M KF +  ++   + LI+G C+  R+ +A +L  K+
Sbjct: 108 NIVINCLCR--CSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKM 165

Query: 465 PQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKT 524
            + G  P VV Y+ +I G C+ G +  A +    ME++G   + VT+N+L+ G   + + 
Sbjct: 166 EEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRW 225

Query: 525 SKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKSSYRACLYVTIFQPS 584
           S    L+  M    R++VP+  TF+ V+D+  K+ K+ E   + +   R C+   +F  +
Sbjct: 226 SDAARLMRDMV--MRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYN 283

Query: 585 SL 586
           SL
Sbjct: 284 SL 285


>gi|224079730|ref|XP_002305930.1| predicted protein [Populus trichocarpa]
 gi|222848894|gb|EEE86441.1| predicted protein [Populus trichocarpa]
          Length = 470

 Score =  325 bits (834), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 179/476 (37%), Positives = 270/476 (56%), Gaps = 15/476 (3%)

Query: 72  SPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVEN 131
           SP   + N+L     + +  D   S   K + +GL P  +T   LIN       GL    
Sbjct: 7   SPNTCTLNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLIN-------GLGKVG 59

Query: 132 RIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKT 191
           +  +A  LF +M+A G +PD  TY T+ING C+ G  ++A  L KKM           + 
Sbjct: 60  KFAQAVELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAG------CQL 113

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
           N+ +YS +I SLCK   V++A ++F  MK + I+P +   T+LI G C    W+E + L 
Sbjct: 114 NVVTYSTLIHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALL 173

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
            EM  L   PN++TFNV++D  CK GK+  A G+L+ M + G+ PD  TYNSLM GY + 
Sbjct: 174 NEMTSLNIMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMW 233

Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
             +  AR++F  M +KGCK  V SY+ILINGYCK   ++EA  L+ ++I  G     ++Y
Sbjct: 234 TEVVEARKLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSY 293

Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
           NTL+ GL Q G+   AQ LF  M      P+L TY IL+DG CK   + +A +LF  ++ 
Sbjct: 294 NTLIHGLCQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQS 353

Query: 432 NKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEK 491
              +  + ++N L++ +CK+G L +A ELF +L   GL P V  Y+ +I+GLC++G L++
Sbjct: 354 TYLKPNLVMYNILVNAMCKSGNLKDARELFSELFVIGLQPNVQIYTTIINGLCKEGLLDE 413

Query: 492 ANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTT 547
           A +    ME +GC P+  ++N ++ GFLQ+   S+ V L+ +M   +R  + D  T
Sbjct: 414 ALEAFRNMEDDGCPPDEFSYNVIIRGFLQHKDESRAVHLIGEMR--DRGFITDAGT 467



 Score =  178 bits (451), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 109/352 (30%), Positives = 169/352 (48%), Gaps = 15/352 (4%)

Query: 44  FLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVS 103
            +H  CK     +NEA   F YM     SP I ++  L   +     +    +   ++ S
Sbjct: 121 LIHSLCKYR--RVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTS 178

Query: 104 IGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFC 163
           + ++P+ +T N+L++ F       C E ++  A  + K M   GV PDV+TY +L+ G+ 
Sbjct: 179 LNIMPNVVTFNVLVDTF-------CKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYS 231

Query: 164 RTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRG 223
               +  A +L   M++         K ++FSYSI+I+  CK   +D+AK+LF EM  +G
Sbjct: 232 MWTEVVEARKLFDVMITKG------CKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQG 285

Query: 224 INPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEAN 283
             P  V   TLIHG C  G   E   LF  M   G  PNL T+ +++D  CK G + +A 
Sbjct: 286 STPNNVSYNTLIHGLCQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAF 345

Query: 284 GLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGY 343
            L   M    L P+   YN L++  C  G +  ARE+F  +   G +  V  Y  +ING 
Sbjct: 346 RLFRAMQSTYLKPNLVMYNILVNAMCKSGNLKDARELFSELFVIGLQPNVQIYTTIINGL 405

Query: 344 CKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMK 395
           CK   ++EA+  +R +  +G      +YN ++ G  Q      A  L  EM+
Sbjct: 406 CKEGLLDEALEAFRNMEDDGCPPDEFSYNVIIRGFLQHKDESRAVHLIGEMR 457



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 97/335 (28%), Positives = 160/335 (47%), Gaps = 37/335 (11%)

Query: 258 GPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTA 317
           G  PN  T N++I+C C+  +++    +L   I+ GL P   T+ +L++G   VG+   A
Sbjct: 5   GLSPNTCTLNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGKFAQA 64

Query: 318 REIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSG 377
            E+F  M ++GC+    +Y  +ING CKI     A  L++++   G +  V+TY+TL+  
Sbjct: 65  VELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYSTLIHS 124

Query: 378 LFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFG 437
           L +  +   A  +F  MK  ++ P + TY  LI GLC  +  +EA  L + +        
Sbjct: 125 LCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLNIMPN 184

Query: 438 IEIFNCLIDGLCKAGRLDNA----------------------------W-------ELFH 462
           +  FN L+D  CK G++  A                            W       +LF 
Sbjct: 185 VVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEARKLFD 244

Query: 463 KLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNN 522
            +  KG  P V +YSI+I+G C+  ++++A      M   G  PN V++NTL+HG  Q  
Sbjct: 245 VMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGLCQLG 304

Query: 523 KTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAK 557
           +  +  +L   M     NL P+  T++I++D   K
Sbjct: 305 RLREAQDLFKNM-HTNGNL-PNLYTYAILLDGFCK 337



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 73/226 (32%), Positives = 118/226 (52%), Gaps = 2/226 (0%)

Query: 324 MHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQ 383
           M   G      + NILIN +C++  V+   S+  + I  G++ T++T+ TL++GL + G+
Sbjct: 1   MELAGLSPNTCTLNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGK 60

Query: 384 AGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNC 443
              A +LFD+M     +PD  TY  +I+GLCK      A  LF  +E    +  +  ++ 
Sbjct: 61  FAQAVELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYST 120

Query: 444 LIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNG 503
           LI  LCK  R++ A ++F  +  K + PT+ TY+ +I GLC   + ++A+  L  M    
Sbjct: 121 LIHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLN 180

Query: 504 CAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFS 549
             PNVVTFN L+  F +  K      +L  M   E  + PD  T++
Sbjct: 181 IMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMT--EMGVEPDVVTYN 224


>gi|357521609|ref|XP_003631093.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355525115|gb|AET05569.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 788

 Score =  324 bits (831), Expect = 7e-86,   Method: Compositional matrix adjust.
 Identities = 182/544 (33%), Positives = 292/544 (53%), Gaps = 38/544 (6%)

Query: 46  HENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIG 105
           H+NC+    N+++A   F  M  + P PP S F+ L GA+ +  HY   IS + +L S G
Sbjct: 28  HKNCR--FRNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKG 85

Query: 106 LLPDFLTLNILINCFGNKER----------------------------GLCVENRIKEAT 137
           + P   T  ILINC+ ++                              G C+   I +A 
Sbjct: 86  ISPSIATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKAL 145

Query: 138 WLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYS 197
              +N++A G   D  TYGTLING  + G +  AL L ++M     +       N+  YS
Sbjct: 146 DFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQ------PNLVMYS 199

Query: 198 IIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDL 257
            +ID LCK+G V  A  L  ++  RGI    V   +LI G C  G W+EV  L  +M+  
Sbjct: 200 ALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRE 259

Query: 258 GPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTA 317
              P+  TFN++ID LCK G+I EA G+L +M +RG  PD  TYN+LM+GYC    +  A
Sbjct: 260 NVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEA 319

Query: 318 REIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSG 377
           RE+F  M  +G +  V++YN+LI+GYCK   V+EAM L++++ +  +  T+ +YN+L+ G
Sbjct: 320 RELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDG 379

Query: 378 LFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFG 437
           L  +G+  + +KL DEM      PD+ TYNILID LCK   + EA+ +  M+     +  
Sbjct: 380 LCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPN 439

Query: 438 IEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLL 497
           I  +N ++DG C    ++ A ++F+++ + GL P ++ Y+++I+G C+   +++A     
Sbjct: 440 IVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFK 499

Query: 498 YMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAK 557
            M      P++ ++N+L+ G     +   V ELL +M +  ++  PD  T++I++D   K
Sbjct: 500 EMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQS--PDVITYNILLDAFCK 557

Query: 558 DEKY 561
            + +
Sbjct: 558 TQPF 561



 Score =  277 bits (709), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 155/458 (33%), Positives = 245/458 (53%), Gaps = 14/458 (3%)

Query: 77  SFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEA 136
           ++N L         +  V     K+V   + PD  T NILI+        LC E RI EA
Sbjct: 232 TYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILID-------ALCKEGRILEA 284

Query: 137 TWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSY 196
             +   M   G +PD++TY  L+ G+C   N+  A  L  +MV    E       ++ +Y
Sbjct: 285 QGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLE------PDVLNY 338

Query: 197 SIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLD 256
           +++ID  CK  +VD+A  LF E+  + + P +    +LI G C +G    V  L  EM  
Sbjct: 339 NVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHG 398

Query: 257 LGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDT 316
               P+++T+N++ID LCK G+I EA G+L +M+++G+ P+  TYN++MDGYCL   ++ 
Sbjct: 399 SAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNV 458

Query: 317 AREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLS 376
           A++IF  M   G +  +++YN+LINGYCK   V+EA+ L++++    +   + +YN+L+ 
Sbjct: 459 AKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLID 518

Query: 377 GLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEF 436
           GL   G+  + Q+L DEM      PD+ TYNIL+D  CK     +A+ LF  + +     
Sbjct: 519 GLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQI-VEGIWP 577

Query: 437 GIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFL 496
                + ++D LCK  +L  A +    L   G  P V TY+I+I+ LC+ G   +A   L
Sbjct: 578 DFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLL 637

Query: 497 LYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKM 534
             ME N   P+ +TF  ++   LQ N+T K  +L  +M
Sbjct: 638 SKMEDNDRPPDAITFEIIIGVLLQRNETDKAEKLREEM 675



 Score =  204 bits (520), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 127/437 (29%), Positives = 215/437 (49%), Gaps = 16/437 (3%)

Query: 34  VSSPETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDA 93
           V   +   N  +   CK G I   EA+     M+     P I ++N L        +   
Sbjct: 261 VDPDDYTFNILIDALCKEGRIL--EAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHE 318

Query: 94  VISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVI 153
               + ++V  GL PD L  N+LI+       G C    + EA  LFK +    + P + 
Sbjct: 319 ARELFNRMVKRGLEPDVLNYNVLID-------GYCKTKMVDEAMVLFKELCNKNLVPTIA 371

Query: 154 TYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAK 213
           +Y +LI+G C +G +S   +L  +M      +G     ++ +Y+I+ID+LCKEG + +A 
Sbjct: 372 SYNSLIDGLCNSGRISHVKKLLDEM------HGSAQPPDVVTYNILIDALCKEGRILEAL 425

Query: 214 ELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCL 273
            + + M  +G+ P +V    ++ G+C   N      +F  M+  G  P++L +NV+I+  
Sbjct: 426 GVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGY 485

Query: 274 CKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTV 333
           CK   ++EA  L + M  + L PD  +YNSL+DG C +GRI   +E+   M   G    V
Sbjct: 486 CKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDV 545

Query: 334 VSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDE 393
           ++YNIL++ +CK    ++A+SL+RQI+  G+     T + ++  L +  +   A+     
Sbjct: 546 ITYNILLDAFCKTQPFDKAISLFRQIVE-GIWPDFYTNHAIVDNLCKGEKLKMAEDALKH 604

Query: 394 MKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGR 453
           + ++   P++ TY ILI+ LCK+    EA+ L   +E N        F  +I  L +   
Sbjct: 605 LLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSKMEDNDRPPDAITFEIIIGVLLQRNE 664

Query: 454 LDNAWELFHKLPQKGLV 470
            D A +L  ++  +GLV
Sbjct: 665 TDKAEKLREEMIARGLV 681



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 116/408 (28%), Positives = 205/408 (50%), Gaps = 14/408 (3%)

Query: 163 CRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGR 222
           CR  N+  A+    +MV       +        +  ++ ++ + G    A  LF +++ +
Sbjct: 31  CRFRNVDDAVTCFNRMVR------VFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSK 84

Query: 223 GINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEA 282
           GI+P++   T LI+ +    +      L   +L  G +PNL+TFN +I+  C  G I +A
Sbjct: 85  GISPSIATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKA 144

Query: 283 NGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILING 342
               + ++ +G   D+FTY +L++G    G+I  A  +   M     +  +V Y+ LI+G
Sbjct: 145 LDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDG 204

Query: 343 YCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPD 402
            CK   V +A+ L  QI   G+    +TYN+L+ G    G+     +L  +M   NV+PD
Sbjct: 205 LCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPD 264

Query: 403 LSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFH 462
             T+NILID LCK   + EA  +  M+     +  I  +N L++G C    +  A ELF+
Sbjct: 265 DYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFN 324

Query: 463 KLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNN 522
           ++ ++GL P V+ Y+++I G C+   +++A      +      P + ++N+L+ G   + 
Sbjct: 325 RMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSG 384

Query: 523 KTSKVVELLHKM---AEPERNLVPDDTTFSIVVDLLAKDEKYHECSAV 567
           + S V +LL +M   A+P     PD  T++I++D L K+ +  E   V
Sbjct: 385 RISHVKKLLDEMHGSAQP-----PDVVTYNILIDALCKEGRILEALGV 427



 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 97/351 (27%), Positives = 171/351 (48%), Gaps = 2/351 (0%)

Query: 236 HGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLN 295
           H  C   N ++    F  M+ + P P    F+ ++  + + G    A  L   +  +G++
Sbjct: 28  HKNCRFRNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGIS 87

Query: 296 PDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSL 355
           P   T+  L++ Y        A  +  ++   G +  +V++N +ING+C    + +A+  
Sbjct: 88  PSIATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDF 147

Query: 356 YRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCK 415
            + +++ G      TY TL++GL + GQ   A  L  EM+  +V+P+L  Y+ LIDGLCK
Sbjct: 148 CQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCK 207

Query: 416 NNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVT 475
           +  V +A+ L   +           +N LIDG C  GR     +L  K+ ++ + P   T
Sbjct: 208 DGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYT 267

Query: 476 YSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMA 535
           ++I+I  LC++G++ +A   L  M K G  P++VT+N LM G+       +  EL ++M 
Sbjct: 268 FNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMV 327

Query: 536 EPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKSSYRACLYVTIFQPSSL 586
             +R L PD   +++++D   K +   E   + K      L  TI   +SL
Sbjct: 328 --KRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSL 376


>gi|356530056|ref|XP_003533600.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 694

 Score =  324 bits (831), Expect = 9e-86,   Method: Compositional matrix adjust.
 Identities = 178/507 (35%), Positives = 280/507 (55%), Gaps = 34/507 (6%)

Query: 56  LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNI 115
           +++A   F  M  M+ +P I  F  + G++ K +H+   IS  +++   G+ PD +TL+I
Sbjct: 113 VHDAVSQFNGMLLMRNTPSIIEFGKILGSLVKMKHFPTAISLSKQMEVKGIEPDLVTLSI 172

Query: 116 LINCF----------------------------GNKERGLCVENRIKEATWLFKNMIAFG 147
           LINCF                                +GLC++  +K++      ++A G
Sbjct: 173 LINCFCHLGQMAFSFSVLGKILKLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQG 232

Query: 148 VRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEG 207
            + + ++YGTL+NG C+ G    A++L + +          ++ ++  Y+ IID LCK+ 
Sbjct: 233 FQMNQVSYGTLLNGLCKIGETRCAIKLLRMIEDRS------TRPDVVMYNTIIDGLCKDK 286

Query: 208 LVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFN 267
           LV++A + + EM  RGI P V+  +TLI GFC AG       L  EM      P++ T+ 
Sbjct: 287 LVNEAYDFYTEMNSRGIFPDVITYSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYT 346

Query: 268 VMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSK 327
           ++ID LCK GK+ EA  LL +M + G+ P+  TY++LMDGYCLVG +  A++IF +M   
Sbjct: 347 ILIDALCKEGKLKEAKNLLGVMTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQT 406

Query: 328 GCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYA 387
               +V SYNI+ING CK  +V+EAM+L R+++   V    +TYN+L+ GL ++G+   A
Sbjct: 407 EVNPSVCSYNIMINGLCKGKSVDEAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGRITSA 466

Query: 388 QKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDG 447
             L  E+       D+ TY  L+DGLCKN  + +A+ LF  ++    +     +  LIDG
Sbjct: 467 LDLMKELHHRGQPADVITYTSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDG 526

Query: 448 LCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPN 507
           LCK  RL NA +LF  +  KG    V TY++MI GLC++G L++A      ME NGC P+
Sbjct: 527 LCKGARLKNAQKLFQHILVKGCCIDVYTYNVMIGGLCKEGMLDEALAMKSKMEDNGCIPD 586

Query: 508 VVTFNTLMHGFLQNNKTSKVVELLHKM 534
            VTF  ++    + ++  K  +LLH+M
Sbjct: 587 AVTFEIIIRSLFEKDENDKAEKLLHEM 613



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 103/346 (29%), Positives = 175/346 (50%), Gaps = 15/346 (4%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CK  ++N  EA  F+  M      P + +++ L              S   ++    + P
Sbjct: 283 CKDKLVN--EAYDFYTEMNSRGIFPDVITYSTLICGFCLAGQLMGAFSLLNEMTLKNINP 340

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           D  T  ILI+        LC E ++KEA  L   M   GV+P+V+TY TL++G+C  G +
Sbjct: 341 DVYTYTILID-------ALCKEGKLKEAKNLLGVMTKEGVKPNVVTYSTLMDGYCLVGEV 393

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
             A ++   MV  +         ++ SY+I+I+ LCK   VD+A  L  EM  + + P  
Sbjct: 394 HNAKQIFHAMVQTEVN------PSVCSYNIMINGLCKGKSVDEAMNLLREMLHKNVVPNT 447

Query: 229 VVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLEL 288
           V   +LI G C +G       L  E+   G   +++T+  ++D LCK   +++A  L   
Sbjct: 448 VTYNSLIDGLCKSGRITSALDLMKELHHRGQPADVITYTSLLDGLCKNQNLDKAIALFMK 507

Query: 289 MIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILN 348
           M +RG+ P+++TY +L+DG C   R+  A+++F  +  KGC   V +YN++I G CK   
Sbjct: 508 MKERGIQPNKYTYTALIDGLCKGARLKNAQKLFQHILVKGCCIDVYTYNVMIGGLCKEGM 567

Query: 349 VEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEM 394
           ++EA+++  ++  NG     +T+  ++  LF+  +   A+KL  EM
Sbjct: 568 LDEALAMKSKMEDNGCIPDAVTFEIIIRSLFEKDENDKAEKLLHEM 613



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 98/385 (25%), Positives = 170/385 (44%), Gaps = 60/385 (15%)

Query: 40  QLNEFLHENCKSGIINLNEARYFFGYMTHMQ---PSPPISSFNLLFGAVAKNRHYDAVIS 96
           Q+N+  +    +G+  + E R     +  ++     P +  +N +   + K++  +    
Sbjct: 234 QMNQVSYGTLLNGLCKIGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYD 293

Query: 97  FYRKLVSIGLLPDFLTLNILIN--CFGNKERG--------------------------LC 128
           FY ++ S G+ PD +T + LI   C   +  G                          LC
Sbjct: 294 FYTEMNSRGIFPDVITYSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDALC 353

Query: 129 VENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYE---- 184
            E ++KEA  L   M   GV+P+V+TY TL++G+C  G +  A ++   MV  +      
Sbjct: 354 KEGKLKEAKNLLGVMTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTEVNPSVC 413

Query: 185 ------NGLISKT-------------------NIFSYSIIIDSLCKEGLVDKAKELFLEM 219
                 NGL                       N  +Y+ +ID LCK G +  A +L  E+
Sbjct: 414 SYNIMINGLCKGKSVDEAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGRITSALDLMKEL 473

Query: 220 KGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKI 279
             RG    V+  T+L+ G C   N ++   LF++M + G +PN  T+  +ID LCKG ++
Sbjct: 474 HHRGQPADVITYTSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGARL 533

Query: 280 NEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNIL 339
             A  L + ++ +G   D +TYN ++ G C  G +D A  +   M   GC    V++ I+
Sbjct: 534 KNAQKLFQHILVKGCCIDVYTYNVMIGGLCKEGMLDEALAMKSKMEDNGCIPDAVTFEII 593

Query: 340 INGYCKILNVEEAMSLYRQIISNGV 364
           I    +    ++A  L  ++I+ G+
Sbjct: 594 IRSLFEKDENDKAEKLLHEMIAKGL 618



 Score =  125 bits (315), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 85/283 (30%), Positives = 132/283 (46%), Gaps = 15/283 (5%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CK G   L EA+   G MT     P + +++ L                +  +V   + P
Sbjct: 353 CKEG--KLKEAKNLLGVMTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTEVNP 410

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
              + NI+IN       GLC    + EA  L + M+   V P+ +TY +LI+G C++G +
Sbjct: 411 SVCSYNIMIN-------GLCKGKSVDEAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGRI 463

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
           + AL L K++    +  G     ++ +Y+ ++D LCK   +DKA  LF++MK RGI P  
Sbjct: 464 TSALDLMKEL----HHRG--QPADVITYTSLLDGLCKNQNLDKAIALFMKMKERGIQPNK 517

Query: 229 VVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLEL 288
              T LI G C     +    LF  +L  G   ++ T+NVMI  LCK G ++EA  +   
Sbjct: 518 YTYTALIDGLCKGARLKNAQKLFQHILVKGCCIDVYTYNVMIGGLCKEGMLDEALAMKSK 577

Query: 289 MIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKH 331
           M   G  PD  T+  ++         D A ++   M +KG  H
Sbjct: 578 MEDNGCIPDAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGLLH 620



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 84/357 (23%), Positives = 154/357 (43%), Gaps = 53/357 (14%)

Query: 258 GPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYC-----LVG 312
           G  PNL+T +++I+CL   G++  +  +L  +++ G  P+  T  +LM G       L  
Sbjct: 6   GIVPNLVTLSILINCLRHLGQMAFSFSVLGKILKLGYQPNSITLTTLMKGETRCAIKLPR 65

Query: 313 RIDTAREIFLSMHSKGCKHTVV---------SYNILINGYCKILN--VEEAMSLYRQIIS 361
            I+      L   S    H++          ++    +     ++  V +A+S +  ++ 
Sbjct: 66  MIEDRSTRPLMWLSSSLSHSIPNFPPFLPNPTFPFYFHSQPPSIHDVVHDAVSQFNGMLL 125

Query: 362 NGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILID---------- 411
                ++I +  +L  L +      A  L  +M++  +EPDL T +ILI+          
Sbjct: 126 MRNTPSIIEFGKILGSLVKMKHFPTAISLSKQMEVKGIEPDLVTLSILINCFCHLGQMAF 185

Query: 412 -------------------------GLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLID 446
                                    GLC    V++++     +    F+     +  L++
Sbjct: 186 SFSVLGKILKLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQGFQMNQVSYGTLLN 245

Query: 447 GLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAP 506
           GLCK G    A +L   +  +   P VV Y+ +I GLC+   + +A DF   M   G  P
Sbjct: 246 GLCKIGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYDFYTEMNSRGIFP 305

Query: 507 NVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
           +V+T++TL+ GF    +      LL++M    +N+ PD  T++I++D L K+ K  E
Sbjct: 306 DVITYSTLICGFCLAGQLMGAFSLLNEMT--LKNINPDVYTYTILIDALCKEGKLKE 360


>gi|144923530|gb|ABE80159.2| Tetratricopeptide-like helical [Medicago truncatula]
          Length = 695

 Score =  323 bits (828), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 182/546 (33%), Positives = 293/546 (53%), Gaps = 38/546 (6%)

Query: 46  HENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIG 105
           H+NC+    N+++A   F  M  + P PP S F+ L GA+ +  HY   IS + +L S G
Sbjct: 28  HKNCR--FRNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKG 85

Query: 106 LLPDFLTLNILINCFGNKER----------------------------GLCVENRIKEAT 137
           + P   T  ILINC+ ++                              G C+   I +A 
Sbjct: 86  ISPSIATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKAL 145

Query: 138 WLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYS 197
              +N++A G   D  TYGTLING  + G +  AL L ++M     +       N+  YS
Sbjct: 146 DFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQ------PNLVMYS 199

Query: 198 IIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDL 257
            +ID LCK+G V  A  L  ++  RGI    V   +LI G C  G W+EV  L  +M+  
Sbjct: 200 ALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRE 259

Query: 258 GPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTA 317
              P+  TFN++ID LCK G+I EA G+L +M +RG  PD  TYN+LM+GYC    +  A
Sbjct: 260 NVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEA 319

Query: 318 REIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSG 377
           RE+F  M  +G +  V++YN+LI+GYCK   V+EAM L++++ +  +  T+ +YN+L+ G
Sbjct: 320 RELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDG 379

Query: 378 LFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFG 437
           L  +G+  + +KL DEM      PD+ TYNILID LCK   + EA+ +  M+     +  
Sbjct: 380 LCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPN 439

Query: 438 IEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLL 497
           I  +N ++DG C    ++ A ++F+++ + GL P ++ Y+++I+G C+   +++A     
Sbjct: 440 IVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFK 499

Query: 498 YMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAK 557
            M      P++ ++N+L+ G     +   V ELL +M +  ++  PD  T++I++D   K
Sbjct: 500 EMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQS--PDVITYNILLDAFCK 557

Query: 558 DEKYHE 563
            + + +
Sbjct: 558 TQPFDK 563



 Score =  276 bits (706), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 155/458 (33%), Positives = 245/458 (53%), Gaps = 14/458 (3%)

Query: 77  SFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEA 136
           ++N L         +  V     K+V   + PD  T NILI+        LC E RI EA
Sbjct: 232 TYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILID-------ALCKEGRILEA 284

Query: 137 TWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSY 196
             +   M   G +PD++TY  L+ G+C   N+  A  L  +MV    E       ++ +Y
Sbjct: 285 QGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLE------PDVLNY 338

Query: 197 SIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLD 256
           +++ID  CK  +VD+A  LF E+  + + P +    +LI G C +G    V  L  EM  
Sbjct: 339 NVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHG 398

Query: 257 LGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDT 316
               P+++T+N++ID LCK G+I EA G+L +M+++G+ P+  TYN++MDGYCL   ++ 
Sbjct: 399 SAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNV 458

Query: 317 AREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLS 376
           A++IF  M   G +  +++YN+LINGYCK   V+EA+ L++++    +   + +YN+L+ 
Sbjct: 459 AKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLID 518

Query: 377 GLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEF 436
           GL   G+  + Q+L DEM      PD+ TYNIL+D  CK     +A+ LF  + +     
Sbjct: 519 GLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQI-VEGIWP 577

Query: 437 GIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFL 496
                + ++D LCK  +L  A +    L   G  P V TY+I+I+ LC+ G   +A   L
Sbjct: 578 DFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLL 637

Query: 497 LYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKM 534
             ME N   P+ +TF  ++   LQ N+T K  +L  +M
Sbjct: 638 SKMEDNDRPPDAITFEIIIGVLLQRNETDKAEKLREEM 675



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 127/437 (29%), Positives = 215/437 (49%), Gaps = 16/437 (3%)

Query: 34  VSSPETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDA 93
           V   +   N  +   CK G I   EA+     M+     P I ++N L        +   
Sbjct: 261 VDPDDYTFNILIDALCKEGRIL--EAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHE 318

Query: 94  VISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVI 153
               + ++V  GL PD L  N+LI+       G C    + EA  LFK +    + P + 
Sbjct: 319 ARELFNRMVKRGLEPDVLNYNVLID-------GYCKTKMVDEAMVLFKELCNKNLVPTIA 371

Query: 154 TYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAK 213
           +Y +LI+G C +G +S   +L  +M      +G     ++ +Y+I+ID+LCKEG + +A 
Sbjct: 372 SYNSLIDGLCNSGRISHVKKLLDEM------HGSAQPPDVVTYNILIDALCKEGRILEAL 425

Query: 214 ELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCL 273
            + + M  +G+ P +V    ++ G+C   N      +F  M+  G  P++L +NV+I+  
Sbjct: 426 GVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGY 485

Query: 274 CKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTV 333
           CK   ++EA  L + M  + L PD  +YNSL+DG C +GRI   +E+   M   G    V
Sbjct: 486 CKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDV 545

Query: 334 VSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDE 393
           ++YNIL++ +CK    ++A+SL+RQI+  G+     T + ++  L +  +   A+     
Sbjct: 546 ITYNILLDAFCKTQPFDKAISLFRQIVE-GIWPDFYTNHAIVDNLCKGEKLKMAEDALKH 604

Query: 394 MKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGR 453
           + ++   P++ TY ILI+ LCK+    EA+ L   +E N        F  +I  L +   
Sbjct: 605 LLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSKMEDNDRPPDAITFEIIIGVLLQRNE 664

Query: 454 LDNAWELFHKLPQKGLV 470
            D A +L  ++  +GLV
Sbjct: 665 TDKAEKLREEMIARGLV 681



 Score =  181 bits (459), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 116/408 (28%), Positives = 205/408 (50%), Gaps = 14/408 (3%)

Query: 163 CRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGR 222
           CR  N+  A+    +MV       +        +  ++ ++ + G    A  LF +++ +
Sbjct: 31  CRFRNVDDAVTCFNRMVR------VFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSK 84

Query: 223 GINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEA 282
           GI+P++   T LI+ +    +      L   +L  G +PNL+TFN +I+  C  G I +A
Sbjct: 85  GISPSIATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKA 144

Query: 283 NGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILING 342
               + ++ +G   D+FTY +L++G    G+I  A  +   M     +  +V Y+ LI+G
Sbjct: 145 LDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDG 204

Query: 343 YCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPD 402
            CK   V +A+ L  QI   G+    +TYN+L+ G    G+     +L  +M   NV+PD
Sbjct: 205 LCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPD 264

Query: 403 LSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFH 462
             T+NILID LCK   + EA  +  M+     +  I  +N L++G C    +  A ELF+
Sbjct: 265 DYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFN 324

Query: 463 KLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNN 522
           ++ ++GL P V+ Y+++I G C+   +++A      +      P + ++N+L+ G   + 
Sbjct: 325 RMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSG 384

Query: 523 KTSKVVELLHKM---AEPERNLVPDDTTFSIVVDLLAKDEKYHECSAV 567
           + S V +LL +M   A+P     PD  T++I++D L K+ +  E   V
Sbjct: 385 RISHVKKLLDEMHGSAQP-----PDVVTYNILIDALCKEGRILEALGV 427



 Score =  151 bits (382), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 97/351 (27%), Positives = 171/351 (48%), Gaps = 2/351 (0%)

Query: 236 HGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLN 295
           H  C   N ++    F  M+ + P P    F+ ++  + + G    A  L   +  +G++
Sbjct: 28  HKNCRFRNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGIS 87

Query: 296 PDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSL 355
           P   T+  L++ Y        A  +  ++   G +  +V++N +ING+C    + +A+  
Sbjct: 88  PSIATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDF 147

Query: 356 YRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCK 415
            + +++ G      TY TL++GL + GQ   A  L  EM+  +V+P+L  Y+ LIDGLCK
Sbjct: 148 CQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCK 207

Query: 416 NNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVT 475
           +  V +A+ L   +           +N LIDG C  GR     +L  K+ ++ + P   T
Sbjct: 208 DGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYT 267

Query: 476 YSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMA 535
           ++I+I  LC++G++ +A   L  M K G  P++VT+N LM G+       +  EL ++M 
Sbjct: 268 FNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMV 327

Query: 536 EPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKSSYRACLYVTIFQPSSL 586
             +R L PD   +++++D   K +   E   + K      L  TI   +SL
Sbjct: 328 --KRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSL 376


>gi|224130790|ref|XP_002328377.1| predicted protein [Populus trichocarpa]
 gi|222838092|gb|EEE76457.1| predicted protein [Populus trichocarpa]
          Length = 688

 Score =  323 bits (827), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 186/548 (33%), Positives = 285/548 (52%), Gaps = 36/548 (6%)

Query: 51  SGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDF 110
           S  I++++A   F  M  M P P I  F    G++AK + Y  V+    ++   G+    
Sbjct: 69  SNTISVDDALASFYRMARMNPRPSIVEFGKFLGSIAKMKQYSTVVYLCNQMDLFGVTHTV 128

Query: 111 LTLNILINC----------------------------FGNKERGLCVENRIKEATWLFKN 142
            +LNILINC                            F     G+C E +IK A  L+  
Sbjct: 129 YSLNILINCLCRLNHVDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELYNE 188

Query: 143 MIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDS 202
           M+  G  PDVI+Y TLING C +GN ++A+ + KKM     +NG   K N+ +Y+ IIDS
Sbjct: 189 MVRSGHEPDVISYNTLINGLCNSGNTNMAVHVFKKM----EQNG--CKPNVVTYNTIIDS 242

Query: 203 LCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPN 262
           LCK+ LV+ A +   EM GRGI P  +   +++HG CC G   E   LF  M   G +P+
Sbjct: 243 LCKDRLVNDAMDFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPD 302

Query: 263 LLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFL 322
           ++T+N++ID L K   +N+A   L  M+ +G+ PD  TY +++ G C +G+++ A  +F 
Sbjct: 303 VVTYNIIIDSLYKDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFK 362

Query: 323 SMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAG 382
            M  KGCK  VV+YN +I+  CK   V +AM    +++  G+    +TY+T+L G    G
Sbjct: 363 KMEQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLG 422

Query: 383 QAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFN 442
           Q   A +LF EM   NV P+  T++IL+DGLC+   V EA  +F  +     E  I  +N
Sbjct: 423 QLDEATQLFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYN 482

Query: 443 CLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKN 502
            L++G C   +++ A ++F  +  KG  P + +Y+I+I+G C   +++KA   L  M   
Sbjct: 483 ALMNGYCLRCKMNEARKVFEIMVGKGCAPDLHSYNILINGYCNSRRMDKAKALLTQMSVK 542

Query: 503 GCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYH 562
              PN VT+NT+M G     +     EL  KM      ++P   T+SI+++ L K     
Sbjct: 543 KLTPNTVTYNTIMKGLCYVGRLLDAQELFKKMC--SSGMLPTLMTYSILLNGLCKHGHLD 600

Query: 563 ECSAVSKS 570
           E   + KS
Sbjct: 601 EALKLFKS 608



 Score =  293 bits (749), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 172/486 (35%), Positives = 267/486 (54%), Gaps = 50/486 (10%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
           N  ++  C SG  N N A + F  M      P + ++N +  ++ K+R  +  + F  ++
Sbjct: 202 NTLINGLCNSG--NTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDAMDFLSEM 259

Query: 102 VSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFK-------------------- 141
           V  G+ PD +T N +++       GLC   ++ EAT LFK                    
Sbjct: 260 VGRGIPPDAITYNSIVH-------GLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDS 312

Query: 142 ---------------NMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENG 186
                           M+  G+ PDV+TY T+++G C  G L+ A+RL KKM        
Sbjct: 313 LYKDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKG---- 368

Query: 187 LISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEE 246
              K ++ +Y+ IIDSLCK+ LV+ A E   EM  RGI P  V  +T++HGFC  G  +E
Sbjct: 369 --CKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDE 426

Query: 247 VNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMD 306
              LF EM+     PN LTF++++D LC+ G ++EA  + E M ++G+ P+ +TYN+LM+
Sbjct: 427 ATQLFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNALMN 486

Query: 307 GYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQ 366
           GYCL  +++ AR++F  M  KGC   + SYNILINGYC    +++A +L  Q+    +  
Sbjct: 487 GYCLRCKMNEARKVFEIMVGKGCAPDLHSYNILINGYCNSRRMDKAKALLTQMSVKKLTP 546

Query: 367 TVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLF 426
             +TYNT++ GL   G+   AQ+LF +M    + P L TY+IL++GLCK+  + EA+KLF
Sbjct: 547 NTVTYNTIMKGLCYVGRLLDAQELFKKMCSSGMLPTLMTYSILLNGLCKHGHLDEALKLF 606

Query: 427 HMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRK 486
             ++  K E  I ++  LI+G+   G+L+ A  LF KL   G+ P   TY++MI GL ++
Sbjct: 607 KSMKEKKLEPDIILYTILIEGMFIGGKLEVAKGLFSKLSADGIQPPGRTYNVMIKGLLKE 666

Query: 487 GKLEKA 492
           G  ++A
Sbjct: 667 GLSDEA 672



 Score =  272 bits (696), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 164/547 (29%), Positives = 278/547 (50%), Gaps = 40/547 (7%)

Query: 48  NCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLL 107
           NC   + +++ A   +G M  +   P + +F  L   V         +  Y ++V  G  
Sbjct: 136 NCLCRLNHVDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELYNEMVRSGHE 195

Query: 108 PDFLTLNILINCFGN--------------KERG--------------LCVENRIKEATWL 139
           PD ++ N LIN   N              ++ G              LC +  + +A   
Sbjct: 196 PDVISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDAMDF 255

Query: 140 FKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSII 199
              M+  G+ PD ITY ++++G C  G L+ A RL K+M     +NG   K ++ +Y+II
Sbjct: 256 LSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRM----EQNG--CKPDVVTYNII 309

Query: 200 IDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGP 259
           IDSL K+ LV+ A +   EM  +GI P VV  TT++HG C  G   E   LF +M   G 
Sbjct: 310 IDSLYKDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGC 369

Query: 260 RPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTARE 319
           +P+++ +N +ID LCK   +N+A   L  M+ RG+ P+  TY++++ G+C +G++D A +
Sbjct: 370 KPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQ 429

Query: 320 IFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLF 379
           +F  M  +      ++++IL++G C+   V EA  ++  +   GV   + TYN L++G  
Sbjct: 430 LFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNALMNGYC 489

Query: 380 QAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIE 439
              +   A+K+F+ M      PDL +YNILI+G C +  + +A  L   + + K      
Sbjct: 490 LRCKMNEARKVFEIMVGKGCAPDLHSYNILINGYCNSRRMDKAKALLTQMSVKKLTPNTV 549

Query: 440 IFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYM 499
            +N ++ GLC  GRL +A ELF K+   G++PT++TYSI+++GLC+ G L++A      M
Sbjct: 550 TYNTIMKGLCYVGRLLDAQELFKKMCSSGMLPTLMTYSILLNGLCKHGHLDEALKLFKSM 609

Query: 500 EKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAK-- 557
           ++    P+++ +  L+ G     K      L  K++     + P   T+++++  L K  
Sbjct: 610 KEKKLEPDIILYTILIEGMFIGGKLEVAKGLFSKLS--ADGIQPPGRTYNVMIKGLLKEG 667

Query: 558 --DEKYH 562
             DE Y 
Sbjct: 668 LSDEAYE 674


>gi|356522850|ref|XP_003530056.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Glycine max]
          Length = 545

 Score =  322 bits (825), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 196/553 (35%), Positives = 301/553 (54%), Gaps = 47/553 (8%)

Query: 11  FSSETVSKVKLSSLFKSPRQIAAVSSPETQLNEFLHENCKSGIINLNEARYFFGYMTHMQ 70
           F +     V LS+L K P  +   S P  +L+   H    S   N+++A + F  M  M+
Sbjct: 3   FPTRLRFSVSLSTL-KFPSFLPNPSLP--KLHSHFHSRPPS-FENVDDALFQFHRMLCMR 58

Query: 71  PSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCF---------- 120
            +PPI  FN +  + AK +HY  V+S  R+L    + PDF TLNILINCF          
Sbjct: 59  HTPPIIQFNKILDSFAKMKHYPTVVSLSRRLELKAIQPDFFTLNILINCFCHLGQINLAF 118

Query: 121 ---------GNKE---------RGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGF 162
                    G +          +GLC++ ++K+A      ++A G R D ++YGTLING 
Sbjct: 119 SVLSKILKWGYQPDTVTLTTLIKGLCLKGQVKKALHFHDKLLAQGFRLDQVSYGTLINGV 178

Query: 163 CRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGR 222
           C+ G    A++L +++      +G +++ N+  Y+ IID LCK  LV +A  LF EM  +
Sbjct: 179 CKIGETRAAIQLLRRI------DGRLTEPNVVMYNTIIDCLCKRKLVSEACNLFSEMSVK 232

Query: 223 GINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEA 282
           GI+  VV  + +IHGFC  G   E  G   EM+     P++  +N ++D L K GK+ EA
Sbjct: 233 GISANVVTYSAIIHGFCIVGKLTEALGFLNEMVLKAINPDVYIYNTLVDALHKEGKVKEA 292

Query: 283 NGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILING 342
             +L ++++  L P+  TYN+L+DGY        A+ +F ++   G    V SYNI+IN 
Sbjct: 293 KNVLAVIVKTCLKPNVITYNTLIDGY--------AKHVFNAVGLMGVTPDVWSYNIMINR 344

Query: 343 YCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPD 402
            CKI  VEEA++LY+++    +    +TYN+L+ GL ++G+  YA  L DEM       +
Sbjct: 345 LCKIKRVEEALNLYKEMHQKNMVPNTVTYNSLIDGLCKSGRISYAWDLIDEMHDRGHHAN 404

Query: 403 LSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDG-LCKAGRLDNAWELF 461
           + TYN LI+GLCKN  + +A+ L + ++    +  +   N L+ G LCK  RL NA  LF
Sbjct: 405 VITYNSLINGLCKNGQLDKAIALINKMKDQGIQPDMYTLNILLHGLLCKGKRLKNAQGLF 464

Query: 462 HKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQN 521
             L  KG  P V TY+I+I+G C++G L++A      ME +GC+PN +TF  ++   L+ 
Sbjct: 465 QDLLDKGYHPNVYTYNIIIYGHCKEGLLDEAYALQSKMEDSGCSPNAITFKIIICALLEK 524

Query: 522 NKTSKVVELLHKM 534
            +T K  +LL +M
Sbjct: 525 GETDKAEKLLCEM 537



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 111/415 (26%), Positives = 187/415 (45%), Gaps = 65/415 (15%)

Query: 209 VDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNV 268
           VD A   F  M      P ++    ++  F    ++  V  L   +     +P+  T N+
Sbjct: 44  VDDALFQFHRMLCMRHTPPIIQFNKILDSFAKMKHYPTVVSLSRRLELKAIQPDFFTLNI 103

Query: 269 MIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKG 328
           +I+C C  G+IN A  +L  +++ G  PD  T  +L+ G CL G++  A      + ++G
Sbjct: 104 LINCFCHLGQINLAFSVLSKILKWGYQPDTVTLTTLIKGLCLKGQVKKALHFHDKLLAQG 163

Query: 329 CKHTVVSYNILINGYCKILN-----------------------------------VEEAM 353
            +   VSY  LING CKI                                     V EA 
Sbjct: 164 FRLDQVSYGTLINGVCKIGETRAAIQLLRRIDGRLTEPNVVMYNTIIDCLCKRKLVSEAC 223

Query: 354 SLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGL 413
           +L+ ++   G+   V+TY+ ++ G    G+   A    +EM L  + PD+  YN L+D L
Sbjct: 224 NLFSEMSVKGISANVVTYSAIIHGFCIVGKLTEALGFLNEMVLKAINPDVYIYNTLVDAL 283

Query: 414 CKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDG-------------------------- 447
            K   V+EA  +  ++     +  +  +N LIDG                          
Sbjct: 284 HKEGKVKEAKNVLAVIVKTCLKPNVITYNTLIDGYAKHVFNAVGLMGVTPDVWSYNIMIN 343

Query: 448 -LCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAP 506
            LCK  R++ A  L+ ++ QK +VP  VTY+ +I GLC+ G++  A D +  M   G   
Sbjct: 344 RLCKIKRVEEALNLYKEMHQKNMVPNTVTYNSLIDGLCKSGRISYAWDLIDEMHDRGHHA 403

Query: 507 NVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVD-LLAKDEK 560
           NV+T+N+L++G  +N +  K + L++KM   ++ + PD  T +I++  LL K ++
Sbjct: 404 NVITYNSLINGLCKNGQLDKAIALINKMK--DQGIQPDMYTLNILLHGLLCKGKR 456



 Score =  135 bits (341), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 98/361 (27%), Positives = 171/361 (47%), Gaps = 27/361 (7%)

Query: 5   TQFRCLFSSETVSKVKLSSLFKSPRQIAAVSSPETQLNEFLHENCKSGIINLNEARYFFG 64
           T   CL   + VS+    +LF S   +  +S+     +  +H  C  G   L EA  F  
Sbjct: 208 TIIDCLCKRKLVSEA--CNLF-SEMSVKGISANVVTYSAIIHGFCIVG--KLTEALGFLN 262

Query: 65  YMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKE 124
            M     +P +  +N L  A+ K        +    +V   L P+ +T N LI+ +    
Sbjct: 263 EMVLKAINPDVYIYNTLVDALHKEGKVKEAKNVLAVIVKTCLKPNVITYNTLIDGY---- 318

Query: 125 RGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYE 184
                      A  +F  +   GV PDV +Y  +IN  C+   +  AL L+K+M    ++
Sbjct: 319 -----------AKHVFNAVGLMGVTPDVWSYNIMINRLCKIKRVEEALNLYKEM----HQ 363

Query: 185 NGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNW 244
             ++   N  +Y+ +ID LCK G +  A +L  EM  RG +  V+   +LI+G C  G  
Sbjct: 364 KNMVP--NTVTYNSLIDGLCKSGRISYAWDLIDEMHDRGHHANVITYNSLINGLCKNGQL 421

Query: 245 EEVNGLFIEMLDLGPRPNLLTFNVMID-CLCKGGKINEANGLLELMIQRGLNPDRFTYNS 303
           ++   L  +M D G +P++ T N+++   LCKG ++  A GL + ++ +G +P+ +TYN 
Sbjct: 422 DKAIALINKMKDQGIQPDMYTLNILLHGLLCKGKRLKNAQGLFQDLLDKGYHPNVYTYNI 481

Query: 304 LMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNG 363
           ++ G+C  G +D A  +   M   GC    +++ I+I    +    ++A  L  ++I+ G
Sbjct: 482 IIYGHCKEGLLDEAYALQSKMEDSGCSPNAITFKIIICALLEKGETDKAEKLLCEMIARG 541

Query: 364 V 364
           +
Sbjct: 542 L 542



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 68/275 (24%), Positives = 127/275 (46%), Gaps = 5/275 (1%)

Query: 315 DTAREIFLSMHSKGC-KHT--VVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
           +   +     H   C +HT  ++ +N +++ + K+ +    +SL R++    ++    T 
Sbjct: 42  ENVDDALFQFHRMLCMRHTPPIIQFNKILDSFAKMKHYPTVVSLSRRLELKAIQPDFFTL 101

Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
           N L++     GQ   A  +  ++  +  +PD  T   LI GLC    V++A+     L  
Sbjct: 102 NILINCFCHLGQINLAFSVLSKILKWGYQPDTVTLTTLIKGLCLKGQVKKALHFHDKLLA 161

Query: 432 NKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEK 491
             F      +  LI+G+CK G    A +L  ++  +   P VV Y+ +I  LC++  + +
Sbjct: 162 QGFRLDQVSYGTLINGVCKIGETRAAIQLLRRIDGRLTEPNVVMYNTIIDCLCKRKLVSE 221

Query: 492 ANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIV 551
           A +    M   G + NVVT++ ++HGF    K ++ +  L++M     N  PD   ++ +
Sbjct: 222 ACNLFSEMSVKGISANVVTYSAIIHGFCIVGKLTEALGFLNEMVLKAIN--PDVYIYNTL 279

Query: 552 VDLLAKDEKYHECSAVSKSSYRACLYVTIFQPSSL 586
           VD L K+ K  E   V     + CL   +   ++L
Sbjct: 280 VDALHKEGKVKEAKNVLAVIVKTCLKPNVITYNTL 314


>gi|357498963|ref|XP_003619770.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494785|gb|AES75988.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 582

 Score =  322 bits (824), Expect = 5e-85,   Method: Compositional matrix adjust.
 Identities = 174/501 (34%), Positives = 277/501 (55%), Gaps = 34/501 (6%)

Query: 62  FFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFG 121
           F   + H  P+PPI  FN +  ++ K +H+   +S ++++   G++ DF T NILINCF 
Sbjct: 57  FNSLLHHKNPTPPIIQFNKILSSLVKAKHHSTALSLHQQMELNGIVSDFFTFNILINCFS 116

Query: 122 NKE----------------------------RGLCVENRIKEATWLFKNMIAFGVRPDVI 153
                                          +GLC++  I +A      ++A G   D +
Sbjct: 117 QLGLNSLSFSVFGKILKKGFDPNAITFNTLIKGLCLKGHIHQALNFHDKVVAQGFHLDQV 176

Query: 154 TYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAK 213
           +YGTLING C+ G ++ AL+L K++      +G + + N   Y++IID++CK  LV+ A 
Sbjct: 177 SYGTLINGLCKVGRITAALQLLKRV------DGKLVQPNAVMYNMIIDNMCKAKLVNDAF 230

Query: 214 ELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCL 273
           +L+ +M  + I+P    C +LI+GFC  G  +E  GL  +M+     P + TF++++D  
Sbjct: 231 DLYSQMVAKRISPDDFTCNSLIYGFCIMGQLKEAVGLLHKMILENINPRMYTFSILVDAF 290

Query: 274 CKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTV 333
           CK GK+ EA  +L + +++ +  D  TYNSLMDGYCLV  I+ A++IF SM S+G    V
Sbjct: 291 CKEGKVKEAKMMLGVTMKKDIILDVVTYNSLMDGYCLVKEINKAKDIFDSMASRGVIANV 350

Query: 334 VSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDE 393
            SY  +ING CKI  V+EA++L+ ++    +   V+TYN+L+ GL + G+     KL DE
Sbjct: 351 QSYTTMINGLCKIKMVDEAVNLFEEMRCRKIIPNVVTYNSLIDGLGKLGKISCVLKLVDE 410

Query: 394 MKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGR 453
           M      P++ TYN ++D LCKN+ V +A+ L   L+       +  +  LI GLC++G+
Sbjct: 411 MHDRGQPPNIITYNSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTVLIKGLCQSGK 470

Query: 454 LDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNT 513
           L++A ++F  L  KG    V TY++MI G C KG  + A   L  ME NGC PN  T+  
Sbjct: 471 LEDAQKVFEDLLVKGYNLDVYTYTVMIQGFCVKGLFDAALALLSKMEDNGCIPNAKTYEI 530

Query: 514 LMHGFLQNNKTSKVVELLHKM 534
           ++    + ++     +LL +M
Sbjct: 531 VILSLFEKDENDMAEKLLREM 551



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 132/488 (27%), Positives = 224/488 (45%), Gaps = 45/488 (9%)

Query: 21  LSSLFKSPRQIAAVS-SPETQLNEFLHE--------NCKSGIINLNEARY-FFGYMTHMQ 70
           LSSL K+     A+S   + +LN  + +        NC S +  LN   +  FG +    
Sbjct: 77  LSSLVKAKHHSTALSLHQQMELNGIVSDFFTFNILINCFSQL-GLNSLSFSVFGKILKKG 135

Query: 71  PSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKER----- 125
             P   +FN L   +    H    ++F+ K+V+ G   D ++   LIN      R     
Sbjct: 136 FDPNAITFNTLIKGLCLKGHIHQALNFHDKVVAQGFHLDQVSYGTLINGLCKVGRITAAL 195

Query: 126 -----------------------GLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGF 162
                                   +C    + +A  L+  M+A  + PD  T  +LI GF
Sbjct: 196 QLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRISPDDFTCNSLIYGF 255

Query: 163 CRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGR 222
           C  G L  A+ L  KM+    EN       ++++SI++D+ CKEG V +AK +      +
Sbjct: 256 CIMGQLKEAVGLLHKMI---LEN---INPRMYTFSILVDAFCKEGKVKEAKMMLGVTMKK 309

Query: 223 GINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEA 282
            I   VV   +L+ G+C      +   +F  M   G   N+ ++  MI+ LCK   ++EA
Sbjct: 310 DIILDVVTYNSLMDGYCLVKEINKAKDIFDSMASRGVIANVQSYTTMINGLCKIKMVDEA 369

Query: 283 NGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILING 342
             L E M  R + P+  TYNSL+DG   +G+I    ++   MH +G    +++YN +++ 
Sbjct: 370 VNLFEEMRCRKIIPNVVTYNSLIDGLGKLGKISCVLKLVDEMHDRGQPPNIITYNSILDA 429

Query: 343 YCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPD 402
            CK  +V++A++L   +   G+R  + TY  L+ GL Q+G+   AQK+F+++ +     D
Sbjct: 430 LCKNHHVDKAIALLTNLKDQGIRPDMYTYTVLIKGLCQSGKLEDAQKVFEDLLVKGYNLD 489

Query: 403 LSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFH 462
           + TY ++I G C       A+ L   +E N      + +  +I  L +    D A +L  
Sbjct: 490 VYTYTVMIQGFCVKGLFDAALALLSKMEDNGCIPNAKTYEIVILSLFEKDENDMAEKLLR 549

Query: 463 KLPQKGLV 470
           ++  +GL+
Sbjct: 550 EMIARGLL 557



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 68/241 (28%), Positives = 118/241 (48%), Gaps = 2/241 (0%)

Query: 324 MHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQ 383
           +H K     ++ +N +++   K  +   A+SL++Q+  NG+     T+N L++   Q G 
Sbjct: 61  LHHKNPTPPIIQFNKILSSLVKAKHHSTALSLHQQMELNGIVSDFFTFNILINCFSQLGL 120

Query: 384 AGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNC 443
              +  +F ++     +P+  T+N LI GLC    + +A+     +    F      +  
Sbjct: 121 NSLSFSVFGKILKKGFDPNAITFNTLIKGLCLKGHIHQALNFHDKVVAQGFHLDQVSYGT 180

Query: 444 LIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNG 503
           LI+GLCK GR+  A +L  ++  K + P  V Y+++I  +C+   +  A D    M    
Sbjct: 181 LINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKR 240

Query: 504 CAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
            +P+  T N+L++GF    +  + V LLHKM     N+ P   TFSI+VD   K+ K  E
Sbjct: 241 ISPDDFTCNSLIYGFCIMGQLKEAVGLLHKMIL--ENINPRMYTFSILVDAFCKEGKVKE 298

Query: 564 C 564
            
Sbjct: 299 A 299


>gi|357499959|ref|XP_003620268.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495283|gb|AES76486.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 652

 Score =  321 bits (823), Expect = 6e-85,   Method: Compositional matrix adjust.
 Identities = 171/508 (33%), Positives = 287/508 (56%), Gaps = 34/508 (6%)

Query: 55  NLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLN 114
           ++++A   F  +     +PP   FN + G++ K++HY  V+   +K+   G+ P+ +  N
Sbjct: 65  DVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCN 124

Query: 115 ILINCF----------------------------GNKERGLCVENRIKEATWLFKNMIAF 146
           ILINCF                                +GLC++ +I++A      ++A 
Sbjct: 125 ILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLCLKGQIQQAFLFHDKVVAL 184

Query: 147 GVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKE 206
           G   D I+YGTLI+G C+ G    AL L +++      +G + + N+  Y+ IIDS+CK 
Sbjct: 185 GFHFDQISYGTLIHGLCKVGETRAALDLLQRV------DGNLVQPNVVMYNTIIDSMCKV 238

Query: 207 GLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTF 266
            LV++A +LF EM  +GI+P VV  + LI GFC  G   +   LF +M+    +P++ TF
Sbjct: 239 KLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMILENIKPDVYTF 298

Query: 267 NVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHS 326
           N++++  CK GK+ E   + ++M+++G+ P+  TYNSLMDGYCLV  ++ A+ IF +M  
Sbjct: 299 NILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQ 358

Query: 327 KGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGY 386
            G    + SY+I+ING+CKI   +EAM+L++++    +   V+TY++L+ GL ++G+  Y
Sbjct: 359 GGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISY 418

Query: 387 AQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLID 446
           A +L D+M    V P + TYN ++D LCK + V +A+ L   L+    +  +  ++ LI 
Sbjct: 419 ALQLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILIK 478

Query: 447 GLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAP 506
           GLC++G+L++A ++F  L  KG    V TY+IMI G C +G   +A   L  ME NGC P
Sbjct: 479 GLCQSGKLEDARKVFEGLLVKGHNLNVDTYTIMIQGFCVEGLFNEALALLSKMEDNGCIP 538

Query: 507 NVVTFNTLMHGFLQNNKTSKVVELLHKM 534
           +  T+  ++    + ++     +LL +M
Sbjct: 539 DAKTYEIIILSLFKKDENDMAEKLLREM 566



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 112/404 (27%), Positives = 195/404 (48%), Gaps = 37/404 (9%)

Query: 189 SKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVN 248
           SK N  SYS    +      VD A  LF  +  R   P       ++     + ++  V 
Sbjct: 46  SKINFISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVL 105

Query: 249 GLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGY 308
            L  +M   G +PNL+  N++I+C C+ G I  A  +   +++ G  PD  T+ +L+ G 
Sbjct: 106 YLSQKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGL 165

Query: 309 CLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILN-------------------- 348
           CL G+I  A      + + G     +SY  LI+G CK+                      
Sbjct: 166 CLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNV 225

Query: 349 ---------------VEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDE 393
                          V EA  L+ ++IS G+   V+TY+ L+SG    G+   A  LF++
Sbjct: 226 VMYNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNK 285

Query: 394 MKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGR 453
           M L N++PD+ T+NIL++  CK+  ++E   +F M+     +     +N L+DG C    
Sbjct: 286 MILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKE 345

Query: 454 LDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNT 513
           ++ A  +F+ + Q G+ P + +YSIMI+G C+  K ++A +    M +    P+VVT+++
Sbjct: 346 VNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSS 405

Query: 514 LMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAK 557
           L+ G  ++ + S  ++L+ +M   +R + P   T++ ++D L K
Sbjct: 406 LIDGLSKSGRISYALQLVDQMH--DRGVPPTIRTYNSILDALCK 447



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 98/373 (26%), Positives = 181/373 (48%), Gaps = 2/373 (0%)

Query: 238 FCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPD 297
           F    + ++   LF  +L     P    FN ++  L K    +    L + M  RG+ P+
Sbjct: 60  FHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPN 119

Query: 298 RFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYR 357
               N L++ +C +G I  A  +F  +   G     +++  LI G C    +++A   + 
Sbjct: 120 LVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLCLKGQIQQAFLFHD 179

Query: 358 QIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNN 417
           ++++ G     I+Y TL+ GL + G+   A  L   +    V+P++  YN +ID +CK  
Sbjct: 180 KVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVK 239

Query: 418 CVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYS 477
            V EA  LF  +        +  ++ LI G C  G+L++A +LF+K+  + + P V T++
Sbjct: 240 LVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMILENIKPDVYTFN 299

Query: 478 IMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEP 537
           I+++  C+ GK+++       M K G  PN VT+N+LM G+    + +K   + + MA+ 
Sbjct: 300 ILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQG 359

Query: 538 ERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKSSYRACLYVTIFQPSSLGSMIGCTVRLM 597
             N  PD  ++SI+++   K +K+ E   + K  +R  +   +   SSL   +  + R+ 
Sbjct: 360 GVN--PDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRIS 417

Query: 598 PQPEMSDTLGDDG 610
              ++ D + D G
Sbjct: 418 YALQLVDQMHDRG 430


>gi|6692112|gb|AAF24577.1|AC007764_19 F22C12.14 [Arabidopsis thaliana]
          Length = 661

 Score =  321 bits (823), Expect = 6e-85,   Method: Compositional matrix adjust.
 Identities = 188/504 (37%), Positives = 274/504 (54%), Gaps = 29/504 (5%)

Query: 63  FGYMTHMQPSPPISSFN-LLFGAVAKNRHYDAVI---------SFYRKLVSIGLLPDFLT 112
           FG +T +   P + +FN LL G   ++R  +A+          S + ++V IGL P  +T
Sbjct: 164 FGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGSLFDQMVEIGLTPVVIT 223

Query: 113 LNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVAL 172
            N LIN       GLC+E R+ EA  L   M+  G+  DV+TYGT++NG C+ G+   AL
Sbjct: 224 FNTLIN-------GLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSAL 276

Query: 173 RLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCT 232
            L  KM     E   I K ++  YS IID LCK+G    A+ LF EM  +GI P V    
Sbjct: 277 NLLSKM-----EETHI-KPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYN 330

Query: 233 TLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQR 292
            +I GFC  G W +   L  +M++    P++LTFN +I    K GK+ EA  L + M+ R
Sbjct: 331 CMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHR 390

Query: 293 GLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEA 352
            + PD  TYNS++ G+C   R D A+ +F  M S      VV++N +I+ YC+   V+E 
Sbjct: 391 CIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPD----VVTFNTIIDVYCRAKRVDEG 446

Query: 353 MSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDG 412
           M L R+I   G+     TYNTL+ G  +      AQ LF EM  + V PD  T NIL+ G
Sbjct: 447 MQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYG 506

Query: 413 LCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPT 472
            C+N  ++EA++LF +++M+K +     +N +I G+CK  ++D AW+LF  LP  G+ P 
Sbjct: 507 FCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPD 566

Query: 473 VVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLH 532
           V TY++MI G C K  +  AN     M+ NG  P+  T+NTL+ G L+  +  K +EL+ 
Sbjct: 567 VQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELIS 626

Query: 533 KMAEPERNLVPDDTTFSIVVDLLA 556
           +M         D  T  +V DL+ 
Sbjct: 627 EMR--SNGFSGDAFTIKMVADLIT 648



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 130/451 (28%), Positives = 212/451 (47%), Gaps = 57/451 (12%)

Query: 158 LINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFL 217
           +I  F R     VA+ L++KM     E   I   NI+S++I+I   C    +  +   F 
Sbjct: 112 VIGVFVRMNRPDVAISLYRKM-----EIRRIP-LNIYSFNILIKCFCDCHKLSFSLSTFG 165

Query: 218 EMKGRGINPAVVVCTTLIHGFCCA----------GNWEEVNGLFIEMLDLGPRPNLLTFN 267
           ++   G  P VV   TL+HG C            G   E   LF +M+++G  P ++TFN
Sbjct: 166 KLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGSLFDQMVEIGLTPVVITFN 225

Query: 268 VMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDT----------- 316
            +I+ LC  G++ EA  L+  M+ +GL+ D  TY ++++G C +G   +           
Sbjct: 226 TLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEET 285

Query: 317 ------------------------AREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEA 352
                                   A+ +F  M  KG    V +YN +I+G+C      +A
Sbjct: 286 HIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDA 345

Query: 353 MSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDG 412
             L R +I   +   V+T+N L+S   + G+   A+KL DEM    + PD  TYN +I G
Sbjct: 346 QRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYG 405

Query: 413 LCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPT 472
            CK+N   +A  +F ++        +  FN +ID  C+A R+D   +L  ++ ++GLV  
Sbjct: 406 FCKHNRFDDAKHMFDLMASPD----VVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVAN 461

Query: 473 VVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLH 532
             TY+ +IHG C    L  A D    M  +G  P+ +T N L++GF +N K  + +EL  
Sbjct: 462 TTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFE 521

Query: 533 KMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
            +   + +L  D   ++I++  + K  K  E
Sbjct: 522 VIQMSKIDL--DTVAYNIIIHGMCKGSKVDE 550



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 80/286 (27%), Positives = 131/286 (45%), Gaps = 12/286 (4%)

Query: 302 NSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIIS 361
           N ++  +  + R D A  ++  M  +     + S+NILI  +C    +  ++S + ++  
Sbjct: 110 NKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTK 169

Query: 362 NGVRQTVITYNTLLSGLFQAGQAGYA----------QKLFDEMKLYNVEPDLSTYNILID 411
            G +  V+T+NTLL GL    +   A            LFD+M    + P + T+N LI+
Sbjct: 170 LGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGSLFDQMVEIGLTPVVITFNTLIN 229

Query: 412 GLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVP 471
           GLC    V EA  L + +        +  +  +++G+CK G   +A  L  K+ +  + P
Sbjct: 230 GLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKP 289

Query: 472 TVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELL 531
            VV YS +I  LC+ G    A      M + G APNV T+N ++ GF    + S    LL
Sbjct: 290 DVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLL 349

Query: 532 HKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKSSYRACLY 577
             M E E N  PD  TF+ ++    K+ K  E   +       C++
Sbjct: 350 RDMIEREIN--PDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIF 393



 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 55/226 (24%), Positives = 113/226 (50%), Gaps = 12/226 (5%)

Query: 348 NVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYN 407
           ++++A+  +  ++ +    T +  N ++    +  +   A  L+ +M++  +  ++ ++N
Sbjct: 86  SLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFN 145

Query: 408 ILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAW--------- 458
           ILI   C  + +  ++  F  L    F+  +  FN L+ GLC   R+  A          
Sbjct: 146 ILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVET 205

Query: 459 -ELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHG 517
             LF ++ + GL P V+T++ +I+GLC +G++ +A   +  M   G   +VVT+ T+++G
Sbjct: 206 GSLFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNG 265

Query: 518 FLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
             +   T   + LL KM E   ++ PD   +S ++D L KD  + +
Sbjct: 266 MCKMGDTKSALNLLSKMEET--HIKPDVVIYSAIIDRLCKDGHHSD 309



 Score = 72.8 bits (177), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 67/270 (24%), Positives = 111/270 (41%), Gaps = 43/270 (15%)

Query: 37  PET-QLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVI 95
           P+T   N  ++  CK      ++A++ F  M     SP + +FN +     + +  D  +
Sbjct: 394 PDTVTYNSMIYGFCKHN--RFDDAKHMFDLMA----SPDVVTFNTIIDVYCRAKRVDEGM 447

Query: 96  SFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITY 155
              R++   GL+ +  T N LI+       G C  + +  A  LF+ MI+ GV PD IT 
Sbjct: 448 QLLREISRRGLVANTTTYNTLIH-------GFCEVDNLNAAQDLFQEMISHGVCPDTITC 500

Query: 156 GTLINGFCRTGNLSVALRLHK--KMVSGDYE--------NGLIS---------------- 189
             L+ GFC    L  AL L +  +M   D +        +G+                  
Sbjct: 501 NILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPI 560

Query: 190 ---KTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEE 246
              + ++ +Y+++I   C +  +  A  LF +MK  G  P      TLI G   AG  ++
Sbjct: 561 HGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDK 620

Query: 247 VNGLFIEMLDLGPRPNLLTFNVMIDCLCKG 276
              L  EM   G   +  T  ++ D +  G
Sbjct: 621 SIELISEMRSNGFSGDAFTIKMVADLITDG 650


>gi|46518447|gb|AAS99705.1| At1g62720 [Arabidopsis thaliana]
          Length = 426

 Score =  321 bits (822), Expect = 8e-85,   Method: Compositional matrix adjust.
 Identities = 171/441 (38%), Positives = 259/441 (58%), Gaps = 16/441 (3%)

Query: 66  MTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKER 125
           M   +P P I  F+ +   +AK+++YD VIS +  +   G+  D  + NI+INC      
Sbjct: 1   MIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINC------ 54

Query: 126 GLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYEN 185
            LC  +R   A  +   M+ FG  PDV+T  +LINGFC+   +  A+ L  KM     E 
Sbjct: 55  -LCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKM----EEM 109

Query: 186 GLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWE 245
           G   + ++  Y+ IID  CK GLV+ A ELF  M+  G+    V   +L+ G CC+G W 
Sbjct: 110 GF--RPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWS 167

Query: 246 EVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLM 305
           +   L  +M+     PN++TF  +ID   K GK +EA  L E M +R ++PD FTYNSL+
Sbjct: 168 DAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLI 227

Query: 306 DGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVR 365
           +G C+ GR+D A+++   M +KGC   VV+YN LING+CK   V+E   L+R++   G+ 
Sbjct: 228 NGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLV 287

Query: 366 QTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKL 425
              ITYNT++ G FQAG+   AQ++F  M   +  P++ TY+IL+ GLC N  V++A+ L
Sbjct: 288 GDTITYNTIIQGYFQAGRPDAAQEIFSRM---DSRPNIRTYSILLYGLCMNWRVEKALVL 344

Query: 426 FHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCR 485
           F  ++ ++ E  I  +N +I G+CK G +++AW+LF  L  KGL P VV+Y+ MI G CR
Sbjct: 345 FENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCR 404

Query: 486 KGKLEKANDFLLYMEKNGCAP 506
           K + +K++     M+++G  P
Sbjct: 405 KRQWDKSDLLYRKMQEDGLLP 425



 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 120/420 (28%), Positives = 200/420 (47%), Gaps = 40/420 (9%)

Query: 150 PDVITYGTLINGFCRTGNLSVALRL-HKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGL 208
           P ++ +  +++   ++ N  + + L H   V G          +++SY+I+I+ LC+   
Sbjct: 8   PSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCG-------IGHDLYSYNIVINCLCRCSR 60

Query: 209 VDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNV 268
              A  +  +M   G  P VV  ++LI+GFC      +   L  +M ++G RP+++ +N 
Sbjct: 61  FVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNT 120

Query: 269 MIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKG 328
           +ID  CK G +N+A  L + M + G+  D  TYNSL+ G C  GR   A  +   M  + 
Sbjct: 121 IIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRD 180

Query: 329 CKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQ 388
               V+++  +I+ + K     EAM LY ++    V   V TYN+L++GL   G+   A+
Sbjct: 181 IVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAK 240

Query: 389 KLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGL 448
           ++ D M      PD+ TYN LI+G CK+  V E  KLF  +           +N +I G 
Sbjct: 241 QMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGY 300

Query: 449 CKAGRLDNAWELFHKLPQKGLVPT--------------------------------VVTY 476
            +AGR D A E+F ++  +  + T                                + TY
Sbjct: 301 FQAGRPDAAQEIFSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTY 360

Query: 477 SIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAE 536
           +I+IHG+C+ G +E A D    +   G  P+VV++ T++ GF +  +  K   L  KM E
Sbjct: 361 NIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQE 420



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 95/327 (29%), Positives = 180/327 (55%), Gaps = 5/327 (1%)

Query: 226 PAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGL 285
           P++V  + ++     + N++ V  LF  M   G   +L ++N++I+CLC+  +   A  +
Sbjct: 8   PSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSV 67

Query: 286 LELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCK 345
           +  M++ G  PD  T +SL++G+C   R+  A ++   M   G +  VV YN +I+G CK
Sbjct: 68  VGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCK 127

Query: 346 ILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLST 405
           I  V +A+ L+ ++  +GVR   +TYN+L++GL  +G+   A +L  +M + ++ P++ T
Sbjct: 128 IGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVIT 187

Query: 406 YNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLP 465
           +  +ID   K     EA+KL+  +     +  +  +N LI+GLC  GR+D A ++   + 
Sbjct: 188 FTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMV 247

Query: 466 QKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTS 525
            KG +P VVTY+ +I+G C+  ++++       M + G   + +T+NT++ G+ Q  +  
Sbjct: 248 TKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPD 307

Query: 526 KVVELLHKMAEPERNLVPDDTTFSIVV 552
              E+  +M        P+  T+SI++
Sbjct: 308 AAQEIFSRMDSR-----PNIRTYSILL 329



 Score =  152 bits (383), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 89/299 (29%), Positives = 157/299 (52%), Gaps = 2/299 (0%)

Query: 254 MLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGR 313
           M+   P P+++ F+ ++  + K    +    L   M   G+  D ++YN +++  C   R
Sbjct: 1   MIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSR 60

Query: 314 IDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNT 373
              A  +   M   G +  VV+ + LING+C+   V +A+ L  ++   G R  V+ YNT
Sbjct: 61  FVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNT 120

Query: 374 LLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNK 433
           ++ G  + G    A +LFD M+   V  D  TYN L+ GLC +    +A +L   + M  
Sbjct: 121 IIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRD 180

Query: 434 FEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKAN 493
               +  F  +ID   K G+   A +L+ ++ ++ + P V TY+ +I+GLC  G++++A 
Sbjct: 181 IVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAK 240

Query: 494 DFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVV 552
             L  M   GC P+VVT+NTL++GF ++ +  +  +L  +MA  +R LV D  T++ ++
Sbjct: 241 QMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMA--QRGLVGDTITYNTII 297



 Score =  108 bits (271), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 71/241 (29%), Positives = 112/241 (46%), Gaps = 16/241 (6%)

Query: 56  LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNI 115
            +EA   +  MT     P + ++N L   +  +   D        +V+ G LPD +T N 
Sbjct: 201 FSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNT 260

Query: 116 LINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLH 175
           LIN       G C   R+ E T LF+ M   G+  D ITY T+I G+ + G    A  + 
Sbjct: 261 LIN-------GFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIF 313

Query: 176 KKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLI 235
            +M          S+ NI +YSI++  LC    V+KA  LF  M+   I   +     +I
Sbjct: 314 SRM---------DSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVI 364

Query: 236 HGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLN 295
           HG C  GN E+   LF  +   G +P+++++  MI   C+  + ++++ L   M + GL 
Sbjct: 365 HGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLL 424

Query: 296 P 296
           P
Sbjct: 425 P 425



 Score =  106 bits (264), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 62/222 (27%), Positives = 120/222 (54%), Gaps = 6/222 (2%)

Query: 367 TVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLF 426
           +++ ++ +LS + ++        LF  M++  +  DL +YNI+I+ LC+  C +  + L 
Sbjct: 9   SIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCR--CSRFVIALS 66

Query: 427 HMLEMNKFEFGIEIF--NCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLC 484
            + +M KF +  ++   + LI+G C+  R+ +A +L  K+ + G  P VV Y+ +I G C
Sbjct: 67  VVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSC 126

Query: 485 RKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPD 544
           + G +  A +    ME++G   + VT+N+L+ G   + + S    L+  M    R++VP+
Sbjct: 127 KIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVM--RDIVPN 184

Query: 545 DTTFSIVVDLLAKDEKYHECSAVSKSSYRACLYVTIFQPSSL 586
             TF+ V+D+  K+ K+ E   + +   R C+   +F  +SL
Sbjct: 185 VITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSL 226


>gi|356524676|ref|XP_003530954.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g12700, mitochondrial-like
           [Glycine max]
          Length = 555

 Score =  320 bits (820), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 182/512 (35%), Positives = 271/512 (52%), Gaps = 37/512 (7%)

Query: 63  FGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGN 122
           F  M    P PPI  F+ L GA+ +  HY   IS + +L S G+ P   TL ILINC+ +
Sbjct: 43  FNRMLRKHPPPPIFVFDKLLGAIVRMGHYPTAISLFSQLHSKGITPSIATLTILINCYCH 102

Query: 123 KER----------------------------GLCVENRIKEATWLFKNMIAFGVRPDVIT 154
           +                              G C+   + +A     +++A G   D  +
Sbjct: 103 QAHLSFAFSLLGTILKMGFQPNMVTFNTLINGFCINGMVSKAMAFRLDLMAKGYPLDEFS 162

Query: 155 YGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKE 214
           YG+LING C+ G    AL+L +KM     E  L+ + N+ +YS +ID LCK+ L+  A  
Sbjct: 163 YGSLINGLCKNGQTRDALQLLQKM-----EEDLV-RPNLITYSTVIDGLCKDRLIADALR 216

Query: 215 LFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLC 274
           LF  +  RGI   VV   +LIHG C  G W E   L   M+     P+  TFN+++D LC
Sbjct: 217 LFSLVTSRGILVDVVAYNSLIHGCCSVGQWREATRLLTMMVRGNINPDDYTFNILVDALC 276

Query: 275 KGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVV 334
           K G+I EA G+  +M++RG  PD  TYN+LM+G+CL   +  ARE+F  M  +G +  V+
Sbjct: 277 KEGRIVEAQGVFAVMMKRGEKPDIVTYNALMEGFCLSNNVSEARELFNRMVKRGLEPDVL 336

Query: 335 SYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEM 394
           +YN+LINGYCKI  V+EAM L+++I    +   + TYN+L+ GL + G+    Q+L DEM
Sbjct: 337 NYNVLINGYCKIDMVDEAMVLFKEIRCKNLVPNLATYNSLIDGLCKLGRMSCVQELVDEM 396

Query: 395 KLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRL 454
                 PD+ TYNI +D  CK+   ++A+ LF  +    +     +++ +++  CK  +L
Sbjct: 397 CDRGQSPDIVTYNIFLDAFCKSKPYEKAISLFRQIVQGIWP-DFYMYDVIVENFCKGEKL 455

Query: 455 DNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTL 514
             A E    L   G  P V TY+IMI+ LC+    ++A   L  M+ N C P+ VTF T+
Sbjct: 456 KIAEEALQHLLIHGCCPNVRTYTIMINALCKDCSFDEAMTLLSKMDDNDCPPDAVTFETI 515

Query: 515 MHGFLQNNKTSKVVELLHKMAEPERNLVPDDT 546
           +    + N+T K  +L  +M   ER LV D+ 
Sbjct: 516 IGALQERNETDKAEKLRLEMI--ERGLVNDEA 545



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 106/371 (28%), Positives = 198/371 (53%), Gaps = 2/371 (0%)

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
           IF +  ++ ++ + G    A  LF ++  +GI P++   T LI+ +C   +      L  
Sbjct: 55  IFVFDKLLGAIVRMGHYPTAISLFSQLHSKGITPSIATLTILINCYCHQAHLSFAFSLLG 114

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
            +L +G +PN++TFN +I+  C  G +++A      ++ +G   D F+Y SL++G C  G
Sbjct: 115 TILKMGFQPNMVTFNTLINGFCINGMVSKAMAFRLDLMAKGYPLDEFSYGSLINGLCKNG 174

Query: 313 RIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYN 372
           +   A ++   M     +  +++Y+ +I+G CK   + +A+ L+  + S G+   V+ YN
Sbjct: 175 QTRDALQLLQKMEEDLVRPNLITYSTVIDGLCKDRLIADALRLFSLVTSRGILVDVVAYN 234

Query: 373 TLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMN 432
           +L+ G    GQ   A +L   M   N+ PD  T+NIL+D LCK   + EA  +F ++   
Sbjct: 235 SLIHGCCSVGQWREATRLLTMMVRGNINPDDYTFNILVDALCKEGRIVEAQGVFAVMMKR 294

Query: 433 KFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKA 492
             +  I  +N L++G C +  +  A ELF+++ ++GL P V+ Y+++I+G C+   +++A
Sbjct: 295 GEKPDIVTYNALMEGFCLSNNVSEARELFNRMVKRGLEPDVLNYNVLINGYCKIDMVDEA 354

Query: 493 NDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVV 552
                 +      PN+ T+N+L+ G  +  + S V EL+ +M   +R   PD  T++I +
Sbjct: 355 MVLFKEIRCKNLVPNLATYNSLIDGLCKLGRMSCVQELVDEMC--DRGQSPDIVTYNIFL 412

Query: 553 DLLAKDEKYHE 563
           D   K + Y +
Sbjct: 413 DAFCKSKPYEK 423



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 128/452 (28%), Positives = 221/452 (48%), Gaps = 37/452 (8%)

Query: 48  NCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLL 107
           NC     +L+ A    G +  M   P + +FN L      N      ++F   L++ G  
Sbjct: 98  NCYCHQAHLSFAFSLLGTILKMGFQPNMVTFNTLINGFCINGMVSKAMAFRLDLMAKGYP 157

Query: 108 PDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGN 167
            D  +   LIN       GLC   + ++A  L + M    VRP++ITY T+I+G C+   
Sbjct: 158 LDEFSYGSLIN-------GLCKNGQTRDALQLLQKMEEDLVRPNLITYSTVIDGLCKDRL 210

Query: 168 LSVALRLHKKMVS--------------------GDYENG-----LISKTNI----FSYSI 198
           ++ ALRL   + S                    G +        ++ + NI    ++++I
Sbjct: 211 IADALRLFSLVTSRGILVDVVAYNSLIHGCCSVGQWREATRLLTMMVRGNINPDDYTFNI 270

Query: 199 IIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLG 258
           ++D+LCKEG + +A+ +F  M  RG  P +V    L+ GFC + N  E   LF  M+  G
Sbjct: 271 LVDALCKEGRIVEAQGVFAVMMKRGEKPDIVTYNALMEGFCLSNNVSEARELFNRMVKRG 330

Query: 259 PRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAR 318
             P++L +NV+I+  CK   ++EA  L + +  + L P+  TYNSL+DG C +GR+   +
Sbjct: 331 LEPDVLNYNVLINGYCKIDMVDEAMVLFKEIRCKNLVPNLATYNSLIDGLCKLGRMSCVQ 390

Query: 319 EIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGL 378
           E+   M  +G    +V+YNI ++ +CK    E+A+SL+RQI+  G+      Y+ ++   
Sbjct: 391 ELVDEMCDRGQSPDIVTYNIFLDAFCKSKPYEKAISLFRQIVQ-GIWPDFYMYDVIVENF 449

Query: 379 FQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGI 438
            +  +   A++    + ++   P++ TY I+I+ LCK+    EA+ L   ++ N      
Sbjct: 450 CKGEKLKIAEEALQHLLIHGCCPNVRTYTIMINALCKDCSFDEAMTLLSKMDDNDCPPDA 509

Query: 439 EIFNCLIDGLCKAGRLDNAWELFHKLPQKGLV 470
             F  +I  L +    D A +L  ++ ++GLV
Sbjct: 510 VTFETIIGALQERNETDKAEKLRLEMIERGLV 541



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 99/349 (28%), Positives = 175/349 (50%), Gaps = 2/349 (0%)

Query: 209 VDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNV 268
           VD     F  M  +   P + V   L+      G++     LF ++   G  P++ T  +
Sbjct: 36  VDDTLLSFNRMLRKHPPPPIFVFDKLLGAIVRMGHYPTAISLFSQLHSKGITPSIATLTI 95

Query: 269 MIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKG 328
           +I+C C    ++ A  LL  +++ G  P+  T+N+L++G+C+ G +  A    L + +KG
Sbjct: 96  LINCYCHQAHLSFAFSLLGTILKMGFQPNMVTFNTLINGFCINGMVSKAMAFRLDLMAKG 155

Query: 329 CKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQ 388
                 SY  LING CK     +A+ L +++  + VR  +ITY+T++ GL +      A 
Sbjct: 156 YPLDEFSYGSLINGLCKNGQTRDALQLLQKMEEDLVRPNLITYSTVIDGLCKDRLIADAL 215

Query: 389 KLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGL 448
           +LF  +    +  D+  YN LI G C     +EA +L  M+           FN L+D L
Sbjct: 216 RLFSLVTSRGILVDVVAYNSLIHGCCSVGQWREATRLLTMMVRGNINPDDYTFNILVDAL 275

Query: 449 CKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNV 508
           CK GR+  A  +F  + ++G  P +VTY+ ++ G C    + +A +    M K G  P+V
Sbjct: 276 CKEGRIVEAQGVFAVMMKRGEKPDIVTYNALMEGFCLSNNVSEARELFNRMVKRGLEPDV 335

Query: 509 VTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAK 557
           + +N L++G+ + +   + + L  ++    +NLVP+  T++ ++D L K
Sbjct: 336 LNYNVLINGYCKIDMVDEAMVLFKEIR--CKNLVPNLATYNSLIDGLCK 382



 Score =  125 bits (315), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 85/323 (26%), Positives = 146/323 (45%), Gaps = 16/323 (4%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
           N  +H  C  G     EA      M     +P   +FN+L  A+ K          +  +
Sbjct: 234 NSLIHGCCSVG--QWREATRLLTMMVRGNINPDDYTFNILVDALCKEGRIVEAQGVFAVM 291

Query: 102 VSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLING 161
           +  G  PD +T N L+        G C+ N + EA  LF  M+  G+ PDV+ Y  LING
Sbjct: 292 MKRGEKPDIVTYNALM-------EGFCLSNNVSEARELFNRMVKRGLEPDVLNYNVLING 344

Query: 162 FCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKG 221
           +C+   +  A+ L K++   +         N+ +Y+ +ID LCK G +   +EL  EM  
Sbjct: 345 YCKIDMVDEAMVLFKEIRCKNL------VPNLATYNSLIDGLCKLGRMSCVQELVDEMCD 398

Query: 222 RGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINE 281
           RG +P +V     +  FC +  +E+   LF +++  G  P+   ++V+++  CKG K+  
Sbjct: 399 RGQSPDIVTYNIFLDAFCKSKPYEKAISLFRQIVQ-GIWPDFYMYDVIVENFCKGEKLKI 457

Query: 282 ANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILIN 341
           A   L+ ++  G  P+  TY  +++  C     D A  +   M    C    V++  +I 
Sbjct: 458 AEEALQHLLIHGCCPNVRTYTIMINALCKDCSFDEAMTLLSKMDDNDCPPDAVTFETIIG 517

Query: 342 GYCKILNVEEAMSLYRQIISNGV 364
              +    ++A  L  ++I  G+
Sbjct: 518 ALQERNETDKAEKLRLEMIERGL 540



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 69/258 (26%), Positives = 122/258 (47%), Gaps = 5/258 (1%)

Query: 313 RIDTAREIFLSMHSKGCKHT---VVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVI 369
           +  T  +  LS +    KH    +  ++ L+    ++ +   A+SL+ Q+ S G+  ++ 
Sbjct: 32  KFHTVDDTLLSFNRMLRKHPPPPIFVFDKLLGAIVRMGHYPTAISLFSQLHSKGITPSIA 91

Query: 370 TYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHML 429
           T   L++         +A  L   +     +P++ T+N LI+G C N  V +A+     L
Sbjct: 92  TLTILINCYCHQAHLSFAFSLLGTILKMGFQPNMVTFNTLINGFCINGMVSKAMAFRLDL 151

Query: 430 EMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKL 489
               +      +  LI+GLCK G+  +A +L  K+ +  + P ++TYS +I GLC+   +
Sbjct: 152 MAKGYPLDEFSYGSLINGLCKNGQTRDALQLLQKMEEDLVRPNLITYSTVIDGLCKDRLI 211

Query: 490 EKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFS 549
             A      +   G   +VV +N+L+HG     +  +   LL  M     N+ PDD TF+
Sbjct: 212 ADALRLFSLVTSRGILVDVVAYNSLIHGCCSVGQWREATRLLTMMVRG--NINPDDYTFN 269

Query: 550 IVVDLLAKDEKYHECSAV 567
           I+VD L K+ +  E   V
Sbjct: 270 ILVDALCKEGRIVEAQGV 287



 Score = 92.8 bits (229), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 63/243 (25%), Positives = 112/243 (46%), Gaps = 14/243 (5%)

Query: 55  NLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLN 114
           N++EAR  F  M      P + ++N+L     K    D  +  ++++    L+P+  T N
Sbjct: 315 NVSEARELFNRMVKRGLEPDVLNYNVLINGYCKIDMVDEAMVLFKEIRCKNLVPNLATYN 374

Query: 115 ILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRL 174
            LI+       GLC   R+     L   M   G  PD++TY   ++ FC++     A+ L
Sbjct: 375 SLID-------GLCKLGRMSCVQELVDEMCDRGQSPDIVTYNIFLDAFCKSKPYEKAISL 427

Query: 175 HKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTL 234
            +++V G +        + + Y +I+++ CK   +  A+E    +   G  P V   T +
Sbjct: 428 FRQIVQGIW-------PDFYMYDVIVENFCKGEKLKIAEEALQHLLIHGCCPNVRTYTIM 480

Query: 235 IHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGL 294
           I+  C   +++E   L  +M D    P+ +TF  +I  L +  + ++A  L   MI+RGL
Sbjct: 481 INALCKDCSFDEAMTLLSKMDDNDCPPDAVTFETIIGALQERNETDKAEKLRLEMIERGL 540

Query: 295 NPD 297
             D
Sbjct: 541 VND 543


>gi|18407969|ref|NP_564822.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806279|sp|Q9SH60.2|PP103_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g64100
 gi|332196071|gb|AEE34192.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 666

 Score =  320 bits (819), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 187/509 (36%), Positives = 275/509 (54%), Gaps = 34/509 (6%)

Query: 63  FGYMTHMQPSPPISSFN-LLFGAVAKNRHYDAV--------------ISFYRKLVSIGLL 107
           FG +T +   P + +FN LL G   ++R  +A+              ++ + ++V IGL 
Sbjct: 164 FGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLT 223

Query: 108 PDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGN 167
           P  +T N LIN       GLC+E R+ EA  L   M+  G+  DV+TYGT++NG C+ G+
Sbjct: 224 PVVITFNTLIN-------GLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGD 276

Query: 168 LSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPA 227
              AL L  KM     E   I K ++  YS IID LCK+G    A+ LF EM  +GI P 
Sbjct: 277 TKSALNLLSKM-----EETHI-KPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPN 330

Query: 228 VVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLE 287
           V     +I GFC  G W +   L  +M++    P++LTFN +I    K GK+ EA  L +
Sbjct: 331 VFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCD 390

Query: 288 LMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKIL 347
            M+ R + PD  TYNS++ G+C   R D A+ +F  M S      VV++N +I+ YC+  
Sbjct: 391 EMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPD----VVTFNTIIDVYCRAK 446

Query: 348 NVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYN 407
            V+E M L R+I   G+     TYNTL+ G  +      AQ LF EM  + V PD  T N
Sbjct: 447 RVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCN 506

Query: 408 ILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQK 467
           IL+ G C+N  ++EA++LF +++M+K +     +N +I G+CK  ++D AW+LF  LP  
Sbjct: 507 ILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIH 566

Query: 468 GLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKV 527
           G+ P V TY++MI G C K  +  AN     M+ NG  P+  T+NTL+ G L+  +  K 
Sbjct: 567 GVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKS 626

Query: 528 VELLHKMAEPERNLVPDDTTFSIVVDLLA 556
           +EL+ +M         D  T  +V DL+ 
Sbjct: 627 IELISEMR--SNGFSGDAFTIKMVADLIT 653



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 129/456 (28%), Positives = 212/456 (46%), Gaps = 62/456 (13%)

Query: 158 LINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFL 217
           +I  F R     VA+ L++KM     E   I   NI+S++I+I   C    +  +   F 
Sbjct: 112 VIGVFVRMNRPDVAISLYRKM-----EIRRIP-LNIYSFNILIKCFCDCHKLSFSLSTFG 165

Query: 218 EMKGRGINPAVVVCTTLIHGFCCAGN---------------WEEVNGLFIEMLDLGPRPN 262
           ++   G  P VV   TL+HG C                   + E   LF +M+++G  P 
Sbjct: 166 KLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPV 225

Query: 263 LLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDT------ 316
           ++TFN +I+ LC  G++ EA  L+  M+ +GL+ D  TY ++++G C +G   +      
Sbjct: 226 VITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLS 285

Query: 317 -----------------------------AREIFLSMHSKGCKHTVVSYNILINGYCKIL 347
                                        A+ +F  M  KG    V +YN +I+G+C   
Sbjct: 286 KMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFG 345

Query: 348 NVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYN 407
              +A  L R +I   +   V+T+N L+S   + G+   A+KL DEM    + PD  TYN
Sbjct: 346 RWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYN 405

Query: 408 ILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQK 467
            +I G CK+N   +A  +F ++        +  FN +ID  C+A R+D   +L  ++ ++
Sbjct: 406 SMIYGFCKHNRFDDAKHMFDLMASPD----VVTFNTIIDVYCRAKRVDEGMQLLREISRR 461

Query: 468 GLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKV 527
           GLV    TY+ +IHG C    L  A D    M  +G  P+ +T N L++GF +N K  + 
Sbjct: 462 GLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEA 521

Query: 528 VELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
           +EL   +   + +L  D   ++I++  + K  K  E
Sbjct: 522 LELFEVIQMSKIDL--DTVAYNIIIHGMCKGSKVDE 555



 Score =  119 bits (299), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 82/291 (28%), Positives = 133/291 (45%), Gaps = 17/291 (5%)

Query: 302 NSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIIS 361
           N ++  +  + R D A  ++  M  +     + S+NILI  +C    +  ++S + ++  
Sbjct: 110 NKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTK 169

Query: 362 NGVRQTVITYNTLLSGLFQAGQA-------GY--------AQKLFDEMKLYNVEPDLSTY 406
            G +  V+T+NTLL GL    +        GY        A  LFD+M    + P + T+
Sbjct: 170 LGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITF 229

Query: 407 NILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQ 466
           N LI+GLC    V EA  L + +        +  +  +++G+CK G   +A  L  K+ +
Sbjct: 230 NTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEE 289

Query: 467 KGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSK 526
             + P VV YS +I  LC+ G    A      M + G APNV T+N ++ GF    + S 
Sbjct: 290 THIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSD 349

Query: 527 VVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKSSYRACLY 577
              LL  M E E N  PD  TF+ ++    K+ K  E   +       C++
Sbjct: 350 AQRLLRDMIEREIN--PDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIF 398



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 55/231 (23%), Positives = 113/231 (48%), Gaps = 17/231 (7%)

Query: 348 NVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYN 407
           ++++A+  +  ++ +    T +  N ++    +  +   A  L+ +M++  +  ++ ++N
Sbjct: 86  SLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFN 145

Query: 408 ILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAW--------- 458
           ILI   C  + +  ++  F  L    F+  +  FN L+ GLC   R+  A          
Sbjct: 146 ILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVET 205

Query: 459 ------ELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFN 512
                  LF ++ + GL P V+T++ +I+GLC +G++ +A   +  M   G   +VVT+ 
Sbjct: 206 GFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYG 265

Query: 513 TLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
           T+++G  +   T   + LL KM E   ++ PD   +S ++D L KD  + +
Sbjct: 266 TIVNGMCKMGDTKSALNLLSKMEET--HIKPDVVIYSAIIDRLCKDGHHSD 314



 Score = 72.8 bits (177), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 67/270 (24%), Positives = 111/270 (41%), Gaps = 43/270 (15%)

Query: 37  PET-QLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVI 95
           P+T   N  ++  CK      ++A++ F  M     SP + +FN +     + +  D  +
Sbjct: 399 PDTVTYNSMIYGFCKHN--RFDDAKHMFDLMA----SPDVVTFNTIIDVYCRAKRVDEGM 452

Query: 96  SFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITY 155
              R++   GL+ +  T N LI+       G C  + +  A  LF+ MI+ GV PD IT 
Sbjct: 453 QLLREISRRGLVANTTTYNTLIH-------GFCEVDNLNAAQDLFQEMISHGVCPDTITC 505

Query: 156 GTLINGFCRTGNLSVALRLHK--KMVSGDYE--------NGLIS---------------- 189
             L+ GFC    L  AL L +  +M   D +        +G+                  
Sbjct: 506 NILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPI 565

Query: 190 ---KTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEE 246
              + ++ +Y+++I   C +  +  A  LF +MK  G  P      TLI G   AG  ++
Sbjct: 566 HGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDK 625

Query: 247 VNGLFIEMLDLGPRPNLLTFNVMIDCLCKG 276
              L  EM   G   +  T  ++ D +  G
Sbjct: 626 SIELISEMRSNGFSGDAFTIKMVADLITDG 655


>gi|242058301|ref|XP_002458296.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
 gi|241930271|gb|EES03416.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
          Length = 1035

 Score =  319 bits (818), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 192/554 (34%), Positives = 292/554 (52%), Gaps = 41/554 (7%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CK+ + +  EA   F  M      P I ++N L         +  V+    ++ + G  P
Sbjct: 249 CKAQLFDRAEA--VFQQMIDNGVKPNIDTYNCLIHGYLSIGKWKEVVRMLEEMSAGGPKP 306

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           +  T   L+N        LC   R +EA + F +MI  G++P V TYG +++G+   G L
Sbjct: 307 NCCTYGSLLNY-------LCKNGRCREARFFFDSMIGKGIKPSVTTYGIMLHGYATKGAL 359

Query: 169 SVALRLHKKMV---------------SGDYENGLISKT-NIF-------------SYSII 199
           S    L   MV               S   + G+I K  +IF             SY  +
Sbjct: 360 SEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGIIDKAMDIFNKMRQQGLSPDAVSYGAL 419

Query: 200 IDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGP 259
           ID+LCK G VD A+  F +M   G+ P +VV ++L++G C    WE+V  LF EML++G 
Sbjct: 420 IDALCKLGRVDDAEVKFNQMINEGVTPDIVVFSSLVYGLCTVDKWEKVEELFFEMLNVGI 479

Query: 260 RPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTARE 319
            PN++ FN ++  LCK G++ E   L++ +   G+ PD  +YN+L+DG+CL G ID A +
Sbjct: 480 HPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASK 539

Query: 320 IFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLF 379
           +   M S G K    SYN L++GYCK   ++ A S +R+++SNG+   V+TYNT+L GLF
Sbjct: 540 LLEGMVSVGLKPDSFSYNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLF 599

Query: 380 QAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIE 439
           Q  +   A++L+  M     + D+ TYNI+++GLCK+NCV EA+K+F  L     +  I 
Sbjct: 600 QTKRFSEAKELYLNMINSGTKWDIYTYNIILNGLCKSNCVDEAIKMFQNLCSKGLQLNII 659

Query: 440 IFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYM 499
            FN +I  L K GR ++A +LF  +P  GLV  VVTY +++  L  +G LE+ +     M
Sbjct: 660 TFNIMIGALLKGGRKEDAMDLFAAIPANGLVQNVVTYRLVVENLIEEGSLEEFDSLFSAM 719

Query: 500 EKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDE 559
           EKNG APN    N L+   L     S+    L K+   ERN   + +T S+++ + + DE
Sbjct: 720 EKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKL--DERNFSVEASTTSMLISIFSSDE 777

Query: 560 KYHECSAVSKSSYR 573
             H   ++ K  YR
Sbjct: 778 YQHHAKSLPK-KYR 790



 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 170/636 (26%), Positives = 283/636 (44%), Gaps = 110/636 (17%)

Query: 29  RQIAAVSSPETQLNEFLHENCKSGIINLNEA-RYFFGYMTHMQPSPPISSFNLLFGAVAK 87
           R+++AV     +L   + +  +SG + L +A + F   + H +P+  + +FN L  AV++
Sbjct: 3   RRVSAVRDRCLELERVIADRARSGSLGLGDALKLFDELLPHARPAS-VVAFNHLLAAVSR 61

Query: 88  N-------RHYDAVISFYRKLVS---IGLLPDFLTLNILINCF---GNKER--------- 125
           +          + V+S + ++V    I + P+  T +ILI CF   G+ E          
Sbjct: 62  SSGRRSTTSESETVVSLFNRMVRDCYIKVAPNRCTYSILIGCFCRMGHLEHGFAAFGLIL 121

Query: 126 ----------------GLCVENRIKEA-TWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
                           GLC   R+ EA   L + M   G  PD ++Y  L+ G C     
Sbjct: 122 KTGWRMDHIVINQLLNGLCDGKRVGEAMDVLLQRMPELGCMPDTVSYNILLKGLCNEKRA 181

Query: 169 SVALRL------------------HKKMVSGDYENGLISK--------------TNIFSY 196
             AL L                  +  +++G +  G + K               ++ +Y
Sbjct: 182 EEALELLHMMADDQVWSCPPNVVSYSTVINGFFTEGQVDKPYNLFLEMMDRGIPPDVVTY 241

Query: 197 SIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLD 256
           + +ID LCK  L D+A+ +F +M   G+ P +     LIHG+   G W+EV  +  EM  
Sbjct: 242 TTVIDGLCKAQLFDRAEAVFQQMIDNGVKPNIDTYNCLIHGYLSIGKWKEVVRMLEEMSA 301

Query: 257 LGPRPNLLTFNVMIDCLCKGGKINEA---------------------------------- 282
            GP+PN  T+  +++ LCK G+  EA                                  
Sbjct: 302 GGPKPNCCTYGSLLNYLCKNGRCREARFFFDSMIGKGIKPSVTTYGIMLHGYATKGALSE 361

Query: 283 -NGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILIN 341
            + LL LM+  G++P+   +N     Y   G ID A +IF  M  +G     VSY  LI+
Sbjct: 362 MHDLLNLMVANGISPNHHIFNIFFSAYAKCGIIDKAMDIFNKMRQQGLSPDAVSYGALID 421

Query: 342 GYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEP 401
             CK+  V++A   + Q+I+ GV   ++ +++L+ GL    +    ++LF EM    + P
Sbjct: 422 ALCKLGRVDDAEVKFNQMINEGVTPDIVVFSSLVYGLCTVDKWEKVEELFFEMLNVGIHP 481

Query: 402 DLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELF 461
           ++  +N ++  LCK   V E  +L   +E       +  +N LIDG C AG +D A +L 
Sbjct: 482 NIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLL 541

Query: 462 HKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQN 521
             +   GL P   +Y+ ++HG C+ G+++ A      M  NG  P VVT+NT++HG  Q 
Sbjct: 542 EGMVSVGLKPDSFSYNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQT 601

Query: 522 NKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAK 557
            + S+  EL   M         D  T++I+++ L K
Sbjct: 602 KRFSEAKELYLNMINSGTKW--DIYTYNIILNGLCK 635



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 157/561 (27%), Positives = 267/561 (47%), Gaps = 46/561 (8%)

Query: 41   LNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRK 100
             N  L   CK G   + E +     +  M   P + S+N L          D        
Sbjct: 486  FNTILCNLCKEG--RVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEG 543

Query: 101  LVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLIN 160
            +VS+GL PD  + N L++       G C   RI  A   F+ M++ G+ P V+TY T+++
Sbjct: 544  MVSVGLKPDSFSYNTLLH-------GYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILH 596

Query: 161  GFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMK 220
            G  +T   S A  L+  M++        +K +I++Y+II++ LCK   VD+A ++F  + 
Sbjct: 597  GLFQTKRFSEAKELYLNMINSG------TKWDIYTYNIILNGLCKSNCVDEAIKMFQNLC 650

Query: 221  GRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKIN 280
             +G+   ++    +I      G  E+   LF  +   G   N++T+ ++++ L + G + 
Sbjct: 651  SKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVQNVVTYRLVVENLIEEGSLE 710

Query: 281  EANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILI 340
            E + L   M + G  P+    N+L+      G I  A      +  +       + ++LI
Sbjct: 711  EFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSMLI 770

Query: 341  NGYC---------------KILN-------------VEEAMSLYRQIISNGVRQTVITYN 372
            + +                +ILN             +++A SL+R+++  G+   V+TYN
Sbjct: 771  SIFSSDEYQHHAKSLPKKYRILNEANSSALIKKARRIDDAYSLFREMLMKGLTPDVVTYN 830

Query: 373  TLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMN 432
            T+L GLFQ G+   A++L+  M     + ++ TYNI+++GLCK+NCV EA K+F  L   
Sbjct: 831  TILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIILNGLCKSNCVDEAFKMFQSLCSK 890

Query: 433  KFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKA 492
              +  I  FN +I  L K GR ++A +LF  +P  GLVP VVTY ++   L  +G LE+ 
Sbjct: 891  GLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVPDVVTYRLVAENLIEEGSLEEF 950

Query: 493  NDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVV 552
            +   L MEK+G   +    N L+   LQ    S+    L K+   E+N   + +T S ++
Sbjct: 951  DGLFLTMEKSGTPLDSRLLNALVRRLLQRGDISRAGAYLSKL--DEKNFSLEASTTSELI 1008

Query: 553  DLLAKDEKYHECSAVSKSSYR 573
             L ++ E  H   ++ +  YR
Sbjct: 1009 SLFSRGEYQHHAKSLPE-KYR 1028



 Score = 98.6 bits (244), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 61/235 (25%), Positives = 121/235 (51%), Gaps = 16/235 (6%)

Query: 347 LNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQA-GQAGYAQKLFDEMKLYN------- 398
           L + +A+ L+ +++ +    +V+ +N LL+ + ++ G+     +    + L+N       
Sbjct: 28  LGLGDALKLFDELLPHARPASVVAFNHLLAAVSRSSGRRSTTSESETVVSLFNRMVRDCY 87

Query: 399 --VEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDN 456
             V P+  TY+ILI   C+   ++     F ++    +     + N L++GLC   R+  
Sbjct: 88  IKVAPNRCTYSILIGCFCRMGHLEHGFAAFGLILKTGWRMDHIVINQLLNGLCDGKRVGE 147

Query: 457 AWE-LFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKN---GCAPNVVTFN 512
           A + L  ++P+ G +P  V+Y+I++ GLC + + E+A + L  M  +    C PNVV+++
Sbjct: 148 AMDVLLQRMPELGCMPDTVSYNILLKGLCNEKRAEEALELLHMMADDQVWSCPPNVVSYS 207

Query: 513 TLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAV 567
           T+++GF    +  K   L  +M +  R + PD  T++ V+D L K + +    AV
Sbjct: 208 TVINGFFTEGQVDKPYNLFLEMMD--RGIPPDVVTYTTVIDGLCKAQLFDRAEAV 260


>gi|5454208|gb|AAD43623.1|AC005698_22 T3P18.22 [Arabidopsis thaliana]
          Length = 425

 Score =  319 bits (817), Expect = 4e-84,   Method: Compositional matrix adjust.
 Identities = 162/417 (38%), Positives = 249/417 (59%), Gaps = 8/417 (1%)

Query: 139 LFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSI 198
           L   M+A G +PD++TYG ++NG C+ G+  +A  L  KM  G  E G      +  Y+ 
Sbjct: 3   LIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPG------VLIYNT 56

Query: 199 IIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLG 258
           IID LCK   +D A  LF EM+ +GI P VV  ++LI   C  G W + + L  +M++  
Sbjct: 57  IIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERK 116

Query: 259 PRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAR 318
             P++ TF+ +ID   K GK+ EA  L + M++R ++P   TY+SL++G+C+  R+D A+
Sbjct: 117 INPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAK 176

Query: 319 EIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGL 378
           ++F  M SK C   VV+YN LI G+CK   VEE M ++R++   G+    +TYN L+ GL
Sbjct: 177 QMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGL 236

Query: 379 FQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGI 438
           FQAG    AQ++F EM    V P++ TYN L+DGLCKN  +++A+ +F  L+ +K E  I
Sbjct: 237 FQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTI 296

Query: 439 EIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLY 498
             +N +I+G+CKAG++++ W+LF  L  KG+ P VV Y+ MI G CRKG  E+A+     
Sbjct: 297 YTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKE 356

Query: 499 MEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLL 555
           M+++G  PN   +NTL+   L++       EL+ +M         D +T  +V ++L
Sbjct: 357 MKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSC--GFAGDASTIGLVTNML 411



 Score =  201 bits (511), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 124/421 (29%), Positives = 212/421 (50%), Gaps = 14/421 (3%)

Query: 72  SPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVEN 131
            P + ++ ++   + K    D   +   K+    L P  L  N +I+       GLC   
Sbjct: 13  QPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIID-------GLCKYK 65

Query: 132 RIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKT 191
            + +A  LFK M   G+RP+V+TY +LI+  C  G  S A RL   M+            
Sbjct: 66  HMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKI------NP 119

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
           ++F++S +ID+  KEG + +A++L+ EM  R I+P++V  ++LI+GFC     +E   +F
Sbjct: 120 DVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMF 179

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
             M+     P+++T+N +I   CK  ++ E   +   M QRGL  +  TYN L+ G    
Sbjct: 180 EFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQA 239

Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
           G  D A+EIF  M S G    +++YN L++G CK   +E+AM ++  +  + +  T+ TY
Sbjct: 240 GDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTY 299

Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
           N ++ G+ +AG+      LF  + L  V+PD+  YN +I G C+    +EA  LF  ++ 
Sbjct: 300 NIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKE 359

Query: 432 NKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEK 491
           +        +N LI    + G  + + EL  ++   G      T  ++ + L   G+L+K
Sbjct: 360 DGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNML-HDGRLDK 418

Query: 492 A 492
           +
Sbjct: 419 S 419



 Score =  142 bits (357), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 86/307 (28%), Positives = 149/307 (48%), Gaps = 13/307 (4%)

Query: 57  NEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNIL 116
           ++A      M   + +P + +F+ L  A  K          Y ++V   + P  +T + L
Sbjct: 103 SDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSL 162

Query: 117 INCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHK 176
           IN       G C+ +R+ EA  +F+ M++    PDV+TY TLI GFC+   +   + + +
Sbjct: 163 IN-------GFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFR 215

Query: 177 KMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIH 236
           +M     + GL+   N  +Y+I+I  L + G  D A+E+F EM   G+ P ++   TL+ 
Sbjct: 216 EMS----QRGLVG--NTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLD 269

Query: 237 GFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNP 296
           G C  G  E+   +F  +      P + T+N+MI+ +CK GK+ +   L   +  +G+ P
Sbjct: 270 GLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKP 329

Query: 297 DRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLY 356
           D   YN+++ G+C  G  + A  +F  M   G       YN LI    +  + E +  L 
Sbjct: 330 DVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELI 389

Query: 357 RQIISNG 363
           +++ S G
Sbjct: 390 KEMRSCG 396



 Score =  125 bits (314), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 83/271 (30%), Positives = 135/271 (49%), Gaps = 17/271 (6%)

Query: 56  LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNI 115
           L+EA+  F +M      P + ++N L     K +  +  +  +R++   GL+ + +T NI
Sbjct: 172 LDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNI 231

Query: 116 LINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLH 175
           LI       +GL        A  +FK M++ GV P+++TY TL++G C+ G      +L 
Sbjct: 232 LI-------QGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNG------KLE 278

Query: 176 KKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLI 235
           K MV  +Y      +  I++Y+I+I+ +CK G V+   +LF  +  +G+ P VV   T+I
Sbjct: 279 KAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMI 338

Query: 236 HGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLN 295
            GFC  G+ EE + LF EM + G  PN   +N +I    + G    +  L++ M   G  
Sbjct: 339 SGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFA 398

Query: 296 PDRFTYNSLMDGYCLVGRIDTAREIFLSMHS 326
            D  T   L+      GR+D +   FL M S
Sbjct: 399 GDASTI-GLVTNMLHDGRLDKS---FLDMLS 425



 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 63/235 (26%), Positives = 119/235 (50%), Gaps = 37/235 (15%)

Query: 353 MSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDG 412
           M+L  ++++ G +  ++TY  +++GL + G    A  L ++M+   +EP +  YN +IDG
Sbjct: 1   MALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDG 60

Query: 413 LCKNNCVQEAVKLFHMLEMN-----------------------------------KFEFG 437
           LCK   + +A+ LF  +E                                     K    
Sbjct: 61  LCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPD 120

Query: 438 IEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLL 497
           +  F+ LID   K G+L  A +L+ ++ ++ + P++VTYS +I+G C   +L++A     
Sbjct: 121 VFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFE 180

Query: 498 YMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVV 552
           +M    C P+VVT+NTL+ GF +  +  + +E+  +M+  +R LV +  T++I++
Sbjct: 181 FMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMS--QRGLVGNTVTYNILI 233



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 47/146 (32%), Positives = 74/146 (50%), Gaps = 2/146 (1%)

Query: 441 FNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYME 500
           +  +++GLCK G  D A+ L +K+ Q  L P V+ Y+ +I GLC+   ++ A +    ME
Sbjct: 19  YGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEME 78

Query: 501 KNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEK 560
             G  PNVVT+++L+       + S    LL  M E  R + PD  TFS ++D   K+ K
Sbjct: 79  TKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIE--RKINPDVFTFSALIDAFVKEGK 136

Query: 561 YHECSAVSKSSYRACLYVTIFQPSSL 586
             E   +     +  +  +I   SSL
Sbjct: 137 LVEAEKLYDEMVKRSIDPSIVTYSSL 162


>gi|356497996|ref|XP_003517841.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 600

 Score =  318 bits (814), Expect = 7e-84,   Method: Compositional matrix adjust.
 Identities = 198/580 (34%), Positives = 306/580 (52%), Gaps = 42/580 (7%)

Query: 11  FSSETVSKVKLSSLFKSPRQIAAVSSPETQLNEFLH--ENCKSGIINLNEARYFFGYMTH 68
           F+S + SK  L     S    + VS  +T   +FL    N KS  + L+    F+  M  
Sbjct: 21  FASSSNSKPFLLHPSHSSSTFSFVSDSDTSRAQFLDSMRNAKSVDVALD----FYHKMVT 76

Query: 69  MQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINC--------- 119
           M+P P +  FNLLF  VAK +HY   IS  + +  IG+ P   TLNI+INC         
Sbjct: 77  MKPFPCVKDFNLLFSIVAKMKHYTTAISLIKHMSYIGVKPTVHTLNIVINCLCRLSHAVF 136

Query: 120 -------------------FGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLIN 160
                              F     GLCVE  + +A     ++   G   D  T G + N
Sbjct: 137 GFSVLGLMFKIGVEPSIVTFNTIVNGLCVEGNVAQAIRFVDHLKDMGYESDSYTCGAITN 196

Query: 161 GFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMK 220
           G C+ G+ S AL   KKM   +         ++ +YS ++D LCK+G+V +A  LF +M 
Sbjct: 197 GLCKVGHSSAALSYLKKMEEKN------CNLDVTAYSGVVDGLCKDGMVFEALNLFSQMT 250

Query: 221 GRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKIN 280
           G+GI P +     LIHG C    W+E   L   M+  G  P++ TFNV+     K G I+
Sbjct: 251 GKGIQPDLFTYNCLIHGLCNFDRWKEAAPLLANMMRKGIMPDVQTFNVIAGRFFKTGMIS 310

Query: 281 EANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILI 340
            A  +   M+  G+  D  TY S++  +C++ ++  A E+F  M SKGC   +V+Y  LI
Sbjct: 311 RAKSIFSFMVHMGIEHDVVTYTSIIGAHCMLNQMKDAMEVFDLMISKGCLPNIVTYTSLI 370

Query: 341 NGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVE 400
           +G+C+  N+ +AM    ++++NG+   V+T++TL+ G+ +AG+   A++LF  M  +   
Sbjct: 371 HGWCETKNMNKAMYFLGEMVNNGLDPNVVTWSTLIGGVCKAGKPVAAKELFLVMHKHGQL 430

Query: 401 PDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWEL 460
           P+L T  I++DGL K N   EA+ LF  LE   ++  I I+N ++DG+C +G+L++A EL
Sbjct: 431 PNLQTCAIILDGLFKCNFHSEAMSLFRELEKMNWDLNIIIYNIILDGMCSSGKLNDALEL 490

Query: 461 FHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQ 520
           F  L  KG+   VVTY+IMI GLC++G L+ A D L+ ME+NGC PN  T+N  + G L+
Sbjct: 491 FSYLSSKGVKIDVVTYNIMIKGLCKEGLLDDAEDLLMKMEENGCPPNECTYNVFVQGLLR 550

Query: 521 NNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEK 560
             + SK  + L  M   ++    D TT   +++  + +++
Sbjct: 551 RYQISKSTKYL--MFMKDKGFQADATTTKFLINYFSANKE 588


>gi|356497981|ref|XP_003517834.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 543

 Score =  317 bits (813), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 180/527 (34%), Positives = 286/527 (54%), Gaps = 36/527 (6%)

Query: 62  FFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINC-- 119
           F+  M  M+P P +  FNLLFG VAK +HY   IS  + +  IG+ P+  T NI+INC  
Sbjct: 13  FYHKMVTMKPFPCVKDFNLLFGIVAKMKHYTTAISLIKHMSYIGVKPNVSTHNIVINCLC 72

Query: 120 --------------------------FGNKERGLCVENRIKEATWLFKNMIAFGVRPDVI 153
                                     F     GLCVE  + +A     ++   G   D  
Sbjct: 73  RLNHTVFGFSVLGLMFKIGVEPSIVTFTTIVNGLCVEGNVAQAIRFVDHLKDMGYESDRY 132

Query: 154 TYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAK 213
           T G +ING C+ G+ S AL   KKM   +         ++ +YS ++D LCK+G+V +A 
Sbjct: 133 TRGAIINGLCKVGHSSAALSYLKKMEEQN------CNLDVTAYSAVVDGLCKDGMVFEAL 186

Query: 214 ELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCL 273
           +LF +M G+GI P +     LIHG C    W+E   L   M+  G  P++ TFNV+    
Sbjct: 187 DLFSQMTGKGIQPNLFTYNCLIHGLCNFDRWKEAAPLLANMMRKGIMPDVQTFNVIAGRF 246

Query: 274 CKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTV 333
            K G I+ A  +   M   G+  +  TYNS++  +C++ ++  A E+F  M  KGC   +
Sbjct: 247 LKTGMISRAKSIFSFMGHMGIEHNVVTYNSIIGAHCMLNQMKDAMEVFDLMIRKGCLPNI 306

Query: 334 VSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDE 393
           V+YN LI+G+C+  N+ +AM    ++++NG+   V+T++TL+ G  +AG+   A++LF  
Sbjct: 307 VTYNSLIHGWCETKNMNKAMYFLGEMVNNGLDPDVVTWSTLIGGFCKAGKPVAAKELFFV 366

Query: 394 MKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGR 453
           M  +   PDL T  I++DGL K +   EA+ LF  LE    +  I I++ +++G+C +G+
Sbjct: 367 MHKHGQLPDLQTCAIILDGLFKCHFHSEAMSLFRELEKMNSDLDIIIYSIILNGMCSSGK 426

Query: 454 LDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNT 513
           L++A ELF  L  KG+   VVTY+IMI+GLC++G L+ A D L+ ME+NGC P+  T+N 
Sbjct: 427 LNDALELFSYLSSKGVKIDVVTYNIMINGLCKEGLLDDAEDLLMKMEENGCPPDECTYNV 486

Query: 514 LMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEK 560
            + G L+  + SK  + L  M    +    + TT  ++++  + +++
Sbjct: 487 FVQGLLRRYEISKSTKYL--MFMKGKGFRANATTTKLLINYFSANKE 531



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 103/368 (27%), Positives = 170/368 (46%), Gaps = 15/368 (4%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CK G++   EA   F  MT     P + ++N L   +     +         ++  G++P
Sbjct: 177 CKDGMVF--EALDLFSQMTGKGIQPNLFTYNCLIHGLCNFDRWKEAAPLLANMMRKGIMP 234

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           D  T N++   F   + G+     I  A  +F  M   G+  +V+TY ++I   C    +
Sbjct: 235 DVQTFNVIAGRF--LKTGM-----ISRAKSIFSFMGHMGIEHNVVTYNSIIGAHCMLNQM 287

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
             A+ +   M+      G +   NI +Y+ +I   C+   ++KA     EM   G++P V
Sbjct: 288 KDAMEVFDLMI----RKGCLP--NIVTYNSLIHGWCETKNMNKAMYFLGEMVNNGLDPDV 341

Query: 229 VVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLEL 288
           V  +TLI GFC AG       LF  M   G  P+L T  +++D L K    +EA  L   
Sbjct: 342 VTWSTLIGGFCKAGKPVAAKELFFVMHKHGQLPDLQTCAIILDGLFKCHFHSEAMSLFRE 401

Query: 289 MIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILN 348
           + +   + D   Y+ +++G C  G+++ A E+F  + SKG K  VV+YNI+ING CK   
Sbjct: 402 LEKMNSDLDIIIYSIILNGMCSSGKLNDALELFSYLSSKGVKIDVVTYNIMINGLCKEGL 461

Query: 349 VEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNI 408
           +++A  L  ++  NG      TYN  + GL +  +   + K    MK      + +T  +
Sbjct: 462 LDDAEDLLMKMEENGCPPDECTYNVFVQGLLRRYEISKSTKYLMFMKGKGFRANATTTKL 521

Query: 409 LIDGLCKN 416
           LI+    N
Sbjct: 522 LINYFSAN 529



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 63/247 (25%), Positives = 114/247 (46%), Gaps = 2/247 (0%)

Query: 311 VGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVIT 370
           V  +D A + +  M +      V  +N+L     K+ +   A+SL + +   GV+  V T
Sbjct: 4   VKSVDVALDFYHKMVTMKPFPCVKDFNLLFGIVAKMKHYTTAISLIKHMSYIGVKPNVST 63

Query: 371 YNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLE 430
           +N +++ L +     +   +   M    VEP + T+  +++GLC    V +A++    L+
Sbjct: 64  HNIVINCLCRLNHTVFGFSVLGLMFKIGVEPSIVTFTTIVNGLCVEGNVAQAIRFVDHLK 123

Query: 431 MNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLE 490
              +E        +I+GLCK G    A     K+ ++     V  YS ++ GLC+ G + 
Sbjct: 124 DMGYESDRYTRGAIINGLCKVGHSSAALSYLKKMEEQNCNLDVTAYSAVVDGLCKDGMVF 183

Query: 491 KANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSI 550
           +A D    M   G  PN+ T+N L+HG    ++  +   LL  M    + ++PD  TF++
Sbjct: 184 EALDLFSQMTGKGIQPNLFTYNCLIHGLCNFDRWKEAAPLLANMM--RKGIMPDVQTFNV 241

Query: 551 VVDLLAK 557
           +     K
Sbjct: 242 IAGRFLK 248



 Score = 83.2 bits (204), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 65/251 (25%), Positives = 112/251 (44%), Gaps = 19/251 (7%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
           N  +H  C++   N+N+A YF G M +    P + +++ L G   K     A    +  +
Sbjct: 310 NSLIHGWCETK--NMNKAMYFLGEMVNNGLDPDVVTWSTLIGGFCKAGKPVAAKELFFVM 367

Query: 102 VSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLING 161
              G LPD  T  I+++       GL   +   EA  LF+ +       D+I Y  ++NG
Sbjct: 368 HKHGQLPDLQTCAIILD-------GLFKCHFHSEAMSLFRELEKMNSDLDIIIYSIILNG 420

Query: 162 FCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKG 221
            C +G L+ AL L   + S         K ++ +Y+I+I+ LCKEGL+D A++L ++M+ 
Sbjct: 421 MCSSGKLNDALELFSYLSSKGV------KIDVVTYNIMINGLCKEGLLDDAEDLLMKMEE 474

Query: 222 RGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINE 281
            G  P        + G        +     + M   G R N  T  ++I+        N+
Sbjct: 475 NGCPPDECTYNVFVQGLLRRYEISKSTKYLMFMKGKGFRANATTTKLLINYF----SANK 530

Query: 282 ANGLLELMIQR 292
            N   ++ +Q+
Sbjct: 531 ENRAFQVFLQK 541


>gi|145326646|ref|NP_001077770.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332196072|gb|AEE34193.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 806

 Score =  317 bits (811), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 182/487 (37%), Positives = 268/487 (55%), Gaps = 32/487 (6%)

Query: 63  FGYMTHMQPSPPISSFN-LLFGAVAKNRHYDAV--------------ISFYRKLVSIGLL 107
           FG +T +   P + +FN LL G   ++R  +A+              ++ + ++V IGL 
Sbjct: 164 FGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLT 223

Query: 108 PDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGN 167
           P  +T N LIN       GLC+E R+ EA  L   M+  G+  DV+TYGT++NG C+ G+
Sbjct: 224 PVVITFNTLIN-------GLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGD 276

Query: 168 LSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPA 227
              AL L  KM     E   I K ++  YS IID LCK+G    A+ LF EM  +GI P 
Sbjct: 277 TKSALNLLSKM-----EETHI-KPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPN 330

Query: 228 VVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLE 287
           V     +I GFC  G W +   L  +M++    P++LTFN +I    K GK+ EA  L +
Sbjct: 331 VFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCD 390

Query: 288 LMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKIL 347
            M+ R + PD  TYNS++ G+C   R D A+ +F  M S      VV++N +I+ YC+  
Sbjct: 391 EMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPD----VVTFNTIIDVYCRAK 446

Query: 348 NVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYN 407
            V+E M L R+I   G+     TYNTL+ G  +      AQ LF EM  + V PD  T N
Sbjct: 447 RVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCN 506

Query: 408 ILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQK 467
           IL+ G C+N  ++EA++LF +++M+K +     +N +I G+CK  ++D AW+LF  LP  
Sbjct: 507 ILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIH 566

Query: 468 GLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKV 527
           G+ P V TY++MI G C K  +  AN     M+ NG  P+  T+NTL+ G L+  +  K 
Sbjct: 567 GVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKS 626

Query: 528 VELLHKM 534
           +EL+ +M
Sbjct: 627 IELISEM 633



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 129/456 (28%), Positives = 212/456 (46%), Gaps = 62/456 (13%)

Query: 158 LINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFL 217
           +I  F R     VA+ L++KM     E   I   NI+S++I+I   C    +  +   F 
Sbjct: 112 VIGVFVRMNRPDVAISLYRKM-----EIRRIP-LNIYSFNILIKCFCDCHKLSFSLSTFG 165

Query: 218 EMKGRGINPAVVVCTTLIHGFCCAGN---------------WEEVNGLFIEMLDLGPRPN 262
           ++   G  P VV   TL+HG C                   + E   LF +M+++G  P 
Sbjct: 166 KLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPV 225

Query: 263 LLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDT------ 316
           ++TFN +I+ LC  G++ EA  L+  M+ +GL+ D  TY ++++G C +G   +      
Sbjct: 226 VITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLS 285

Query: 317 -----------------------------AREIFLSMHSKGCKHTVVSYNILINGYCKIL 347
                                        A+ +F  M  KG    V +YN +I+G+C   
Sbjct: 286 KMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFG 345

Query: 348 NVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYN 407
              +A  L R +I   +   V+T+N L+S   + G+   A+KL DEM    + PD  TYN
Sbjct: 346 RWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYN 405

Query: 408 ILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQK 467
            +I G CK+N   +A  +F ++        +  FN +ID  C+A R+D   +L  ++ ++
Sbjct: 406 SMIYGFCKHNRFDDAKHMFDLMASPD----VVTFNTIIDVYCRAKRVDEGMQLLREISRR 461

Query: 468 GLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKV 527
           GLV    TY+ +IHG C    L  A D    M  +G  P+ +T N L++GF +N K  + 
Sbjct: 462 GLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEA 521

Query: 528 VELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
           +EL   +   + +L  D   ++I++  + K  K  E
Sbjct: 522 LELFEVIQMSKIDL--DTVAYNIIIHGMCKGSKVDE 555



 Score =  119 bits (298), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 82/291 (28%), Positives = 133/291 (45%), Gaps = 17/291 (5%)

Query: 302 NSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIIS 361
           N ++  +  + R D A  ++  M  +     + S+NILI  +C    +  ++S + ++  
Sbjct: 110 NKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTK 169

Query: 362 NGVRQTVITYNTLLSGLFQAGQA-------GY--------AQKLFDEMKLYNVEPDLSTY 406
            G +  V+T+NTLL GL    +        GY        A  LFD+M    + P + T+
Sbjct: 170 LGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITF 229

Query: 407 NILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQ 466
           N LI+GLC    V EA  L + +        +  +  +++G+CK G   +A  L  K+ +
Sbjct: 230 NTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEE 289

Query: 467 KGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSK 526
             + P VV YS +I  LC+ G    A      M + G APNV T+N ++ GF    + S 
Sbjct: 290 THIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSD 349

Query: 527 VVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKSSYRACLY 577
              LL  M E E N  PD  TF+ ++    K+ K  E   +       C++
Sbjct: 350 AQRLLRDMIEREIN--PDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIF 398



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 55/226 (24%), Positives = 111/226 (49%), Gaps = 17/226 (7%)

Query: 348 NVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYN 407
           ++++A+  +  ++ +    T +  N ++    +  +   A  L+ +M++  +  ++ ++N
Sbjct: 86  SLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFN 145

Query: 408 ILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAW--------- 458
           ILI   C  + +  ++  F  L    F+  +  FN L+ GLC   R+  A          
Sbjct: 146 ILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVET 205

Query: 459 ------ELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFN 512
                  LF ++ + GL P V+T++ +I+GLC +G++ +A   +  M   G   +VVT+ 
Sbjct: 206 GFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYG 265

Query: 513 TLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKD 558
           T+++G  +   T   + LL KM E   ++ PD   +S ++D L KD
Sbjct: 266 TIVNGMCKMGDTKSALNLLSKMEET--HIKPDVVIYSAIIDRLCKD 309


>gi|356497979|ref|XP_003517833.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 595

 Score =  317 bits (811), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 188/564 (33%), Positives = 300/564 (53%), Gaps = 42/564 (7%)

Query: 27  SPRQIAAVSSPETQLNEFLH--ENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGA 84
           S    +  +S  T   +FL    N KS  + L+    F+  M  M+P P +  FNLLFG 
Sbjct: 32  SSSTFSTYASINTSRAQFLDSLRNVKSVDVALD----FYHKMVTMKPFPCVKDFNLLFGI 87

Query: 85  VAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINC------------------------- 119
           VAK +HY   IS  + +  IG+ P+  T NI+INC                         
Sbjct: 88  VAKMKHYTTAISLIKHMSYIGVKPNVPTHNIVINCLCRLNHTVFGFSVLGLMFKIGVEPS 147

Query: 120 ---FGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHK 176
              F     GLCVE  + +A     ++   G   D  T G +ING C+ G+ S AL   K
Sbjct: 148 IVTFTTIVNGLCVEGNVAQAIRFVDHLKDMGYESDRYTRGAIINGLCKVGHSSAALSYLK 207

Query: 177 KMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIH 236
           KM   +         ++ +Y+ ++D LCK+G+V +A +LF +M G+GI P +     LIH
Sbjct: 208 KMEEQN------CNLDVTAYNAVVDGLCKDGMVFEAWDLFSQMTGKGIQPDLFTYNCLIH 261

Query: 237 GFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNP 296
           G C    W+E   L   M+  G  P++ TFNV+     K G I+ A  +   M   G+  
Sbjct: 262 GLCNFDRWKEAAPLLANMMRKGIMPDVQTFNVIGGRFLKTGMISRAKSIFSFMGHMGIEH 321

Query: 297 DRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLY 356
           D  TY+S++  +C++ ++  A E+F  M  KGC   +V+Y  LI+G+C+I N+ +AM   
Sbjct: 322 DVVTYSSIIGVHCMLNQMKDAMEVFDLMIRKGCLPNIVTYTSLIHGWCEIKNMNKAMYFL 381

Query: 357 RQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKN 416
            ++++NG+   ++T+NTL+ G  +AG+   A++LF  M  +   PDL T  I++DGL K 
Sbjct: 382 GEMVNNGLDPNIVTWNTLIGGFCKAGKPVAAKELFFVMHKHGQLPDLQTCAIILDGLFKC 441

Query: 417 NCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTY 476
           +   EA+ LF  LE    +  I I++ +++G+C +G+L++A ELF  L  KG+   VVTY
Sbjct: 442 HFHSEAMSLFRELEKMNSDLDIIIYSIILNGMCSSGKLNDALELFSYLSSKGVKIDVVTY 501

Query: 477 SIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAE 536
           +IMI+GLC++G L+ A D L+ ME+NGC P+  T+N  + G L+  + SK  + L  M  
Sbjct: 502 NIMINGLCKEGLLDDAEDLLMKMEENGCPPDECTYNVFVQGLLRRYEISKSTKYL--MFM 559

Query: 537 PERNLVPDDTTFSIVVDLLAKDEK 560
             +    + TT  ++++  + +++
Sbjct: 560 KGKGFRANATTTKLLINYFSANKE 583


>gi|255547572|ref|XP_002514843.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223545894|gb|EEF47397.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 594

 Score =  316 bits (810), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 188/532 (35%), Positives = 277/532 (52%), Gaps = 37/532 (6%)

Query: 42  NEFLHENCKSGII-NLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRK 100
           N  + + CK G   N ++A  +F  M HM P P I+ FN L  A+ + +HYD+V+S YRK
Sbjct: 70  NFAVRDKCKGGSFSNFDDALAYFNQMVHMNPFPCITQFNQLLAALVRMKHYDSVVSIYRK 129

Query: 101 LVSIGLLPDFLTLNILINC----------------------------FGNKERGLCVENR 132
           +   G+     TL ILINC                            F     GLC+E R
Sbjct: 130 MEFFGVSCSVYTLTILINCLCHLHLVGLGFSVLGKIFKLGFKPSIITFNTLINGLCIEGR 189

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
           I EA      +++ G +P V T+  ++NG C+ G  S A+   KKMV  D E        
Sbjct: 190 IVEAMEQLDYIMSRGYQPTVYTHTMIVNGLCKIGKTSAAIVWMKKMVELDCE------PE 243

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
           + SYSIIIDSLCK  LV++A +LF  M+  GI+P VV   +LI+G C +G W++ + LF 
Sbjct: 244 VVSYSIIIDSLCKNRLVNEAVDLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFK 303

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
           EML+   +P+++TF++++D LCK G + EA  +   MIQ  + PD  TY+SL+ G C   
Sbjct: 304 EMLEWNMKPDVVTFSILVDALCKEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSS 363

Query: 313 RIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYN 372
               +  +   M S+  +  VV+++I ++ +CK   V EA S+   +I  G+R  V+TYN
Sbjct: 364 LWKESSTLLNEMLSRNIRPDVVTFSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYN 423

Query: 373 TLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMN 432
           +L+ G     Q   A+K+FD M      PD+ +YNILI G CK+  + EA +LF  +   
Sbjct: 424 SLMDGYCLHSQMDEARKVFDIMVNKGCAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHK 483

Query: 433 KFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKA 492
                      LI GLC+AGR   A ELF K+   G  P ++TYS ++ G C+ G L++A
Sbjct: 484 GLTPNSITHTTLISGLCQAGRPYAAKELFKKMGSHGCPPDLITYSTLLSGFCKHGHLDEA 543

Query: 493 NDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPD 544
                 ++K+   PN V    L+ G  +  K     EL   ++  E  L PD
Sbjct: 544 LALFEALKKSQLKPNHVICKILLGGMCKAGKLEDAKELFSSLSIEE--LQPD 593



 Score =  284 bits (726), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 154/416 (37%), Positives = 244/416 (58%), Gaps = 13/416 (3%)

Query: 58  EARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILI 117
           EA     Y+      P + +  ++   + K     A I + +K+V +   P+ ++ +I+I
Sbjct: 192 EAMEQLDYIMSRGYQPTVYTHTMIVNGLCKIGKTSAAIVWMKKMVELDCEPEVVSYSIII 251

Query: 118 NCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKK 177
           +        LC    + EA  LF +M + G+ P V+TY +LI G C +G    A  L K+
Sbjct: 252 D-------SLCKNRLVNEAVDLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKE 304

Query: 178 MVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHG 237
           M+  +       K ++ ++SI++D+LCKEG+V +A  +F +M    + P +V  ++LIHG
Sbjct: 305 MLEWNM------KPDVVTFSILVDALCKEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHG 358

Query: 238 FCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPD 297
            C +  W+E + L  EML    RP+++TF++ +D  CK G ++EA  ++ LMI+RGL P+
Sbjct: 359 VCKSSLWKESSTLLNEMLSRNIRPDVVTFSIWVDVFCKKGMVSEAQSIINLMIERGLRPN 418

Query: 298 RFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYR 357
             TYNSLMDGYCL  ++D AR++F  M +KGC   V+SYNILI GYCK   ++EA  L+ 
Sbjct: 419 VVTYNSLMDGYCLHSQMDEARKVFDIMVNKGCAPDVLSYNILIKGYCKSERIDEAKQLFD 478

Query: 358 QIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNN 417
           ++   G+    IT+ TL+SGL QAG+   A++LF +M  +   PDL TY+ L+ G CK+ 
Sbjct: 479 EMSHKGLTPNSITHTTLISGLCQAGRPYAAKELFKKMGSHGCPPDLITYSTLLSGFCKHG 538

Query: 418 CVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTV 473
            + EA+ LF  L+ ++ +    I   L+ G+CKAG+L++A ELF  L  + L P V
Sbjct: 539 HLDEALALFEALKKSQLKPNHVICKILLGGMCKAGKLEDAKELFSSLSIEELQPDV 594



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 63/226 (27%), Positives = 115/226 (50%), Gaps = 2/226 (0%)

Query: 333 VVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFD 392
           +  +N L+    ++ + +  +S+YR++   GV  +V T   L++ L      G    +  
Sbjct: 104 ITQFNQLLAALVRMKHYDSVVSIYRKMEFFGVSCSVYTLTILINCLCHLHLVGLGFSVLG 163

Query: 393 EMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAG 452
           ++     +P + T+N LI+GLC    + EA++    +    ++  +     +++GLCK G
Sbjct: 164 KIFKLGFKPSIITFNTLINGLCIEGRIVEAMEQLDYIMSRGYQPTVYTHTMIVNGLCKIG 223

Query: 453 RLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFN 512
           +   A     K+ +    P VV+YSI+I  LC+   + +A D   +M   G +P VVT+N
Sbjct: 224 KTSAAIVWMKKMVELDCEPEVVSYSIIIDSLCKNRLVNEAVDLFYHMRSIGISPTVVTYN 283

Query: 513 TLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKD 558
           +L++G   + +  +   L  +M E   N+ PD  TFSI+VD L K+
Sbjct: 284 SLIYGMCNSGQWKQASILFKEMLE--WNMKPDVVTFSILVDALCKE 327


>gi|134302847|gb|ABO70667.1| restorer-of-fertility [Raphanus sativus]
          Length = 687

 Score =  316 bits (809), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 195/620 (31%), Positives = 306/620 (49%), Gaps = 78/620 (12%)

Query: 9   CLFSSETVSKVKLSSLF--KSPRQIAAVSSPETQLNEFLHENCK--SG---IINLNEARY 61
           C F   +      + LF  +S R   A +S E+    F  E+ K  SG   I  L +A  
Sbjct: 6   CGFKCSSSPAESAARLFCTRSIRDTLAKASGESCEAGFGGESLKLQSGFHEIKGLEDAID 65

Query: 62  FFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFG 121
            F  M   +P P +  F  L G V +    D VIS Y+K+    +  D  + NILI CF 
Sbjct: 66  LFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNILIKCFC 125

Query: 122 NKER----------------------------GLCVENRIKEATWLFKNMIAFGVRPDVI 153
           +  +                            GLCVE+R+ EA  LF  M     RP+V+
Sbjct: 126 SCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALNLFHQMFETTCRPNVV 185

Query: 154 TYGTLINGFCRTGNLSVALRLHKKMVS----------GDYENGLISK------------- 190
           T+ TL+NG CR G +  A+ L  +M+           G   +G+  K             
Sbjct: 186 TFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKM 245

Query: 191 -------TNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGN 243
                   N+  YS IIDSLCK+G    A+ LF EM+ +GI P +    ++I GFC +G 
Sbjct: 246 EEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGR 305

Query: 244 WEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNS 303
           W +   L  EML+    P+++T+N +I+   K GK  EA  L + M+ RG+ P+  TY+S
Sbjct: 306 WSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSS 365

Query: 304 LMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNG 363
           ++DG+C   R+D A  +F  M +KGC   ++++N LI+GYC    +++ M L  ++   G
Sbjct: 366 MIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETG 425

Query: 364 VRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAV 423
           +     TYNTL+ G +  G    A  L  EM    + PD+ T + L+DGLC N  +++A+
Sbjct: 426 LVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDAL 485

Query: 424 KLFHMLEMNK-----------FEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPT 472
           ++F +++ +K            E  ++ +N LI GL   G+   A EL+ ++P +G+VP 
Sbjct: 486 EMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPD 545

Query: 473 VVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLH 532
            +TYS MI GLC++ +L++A      M     +PNVVTF TL++G+ +  +    +EL  
Sbjct: 546 TITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFC 605

Query: 533 KMAEPERNLVPDDTTFSIVV 552
           +M    R +V +  T+  ++
Sbjct: 606 EMG--RRGIVANAITYITLI 623



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 147/521 (28%), Positives = 251/521 (48%), Gaps = 53/521 (10%)

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
           +++A  LF +M+     P V+ +  L+    R     + + L++KM     E   I + +
Sbjct: 60  LEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKM-----ERKQI-RCD 113

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
           I+S++I+I   C    +  A   F ++   G++P VV  TTL+HG C      E   LF 
Sbjct: 114 IYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALNLFH 173

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV- 311
           +M +   RPN++TF  +++ LC+ G+I EA  LL+ M++ GL P + TY +++DG C   
Sbjct: 174 QMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKG 233

Query: 312 -----------------------------------GRIDTAREIFLSMHSKGCKHTVVSY 336
                                              GR   A+ +F  M  KG    + +Y
Sbjct: 234 DTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTY 293

Query: 337 NILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKL 396
           N +I G+C      +A  L ++++   +   V+TYN L++   + G+   A++L+DEM  
Sbjct: 294 NSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLP 353

Query: 397 YNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDN 456
             + P+  TY+ +IDG CK N +  A  +F+++        +  FN LIDG C A R+D+
Sbjct: 354 RGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDD 413

Query: 457 AWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMH 516
             EL H++ + GLV    TY+ +IHG    G L  A D L  M  +G  P++VT +TL+ 
Sbjct: 414 GMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLD 473

Query: 517 GFLQNNKTSKVVELLHKMAEPERNL---------VPDDTTFSIVVDLLAKDEKYHECSAV 567
           G   N K    +E+   M + +++L          PD  T++I++  L  + K+ E   +
Sbjct: 474 GLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEEL 533

Query: 568 -SKSSYRACLYVTIFQPSSLGSMIGCTVRLMPQPEMSDTLG 607
             +  +R  +  TI   S +  +   + RL    +M D++G
Sbjct: 534 YEEMPHRGIVPDTITYSSMIDGLCKQS-RLDEATQMFDSMG 573



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 122/395 (30%), Positives = 195/395 (49%), Gaps = 26/395 (6%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           C SG    ++A      M   + SP + ++N L  A  K   +      Y +++  G++P
Sbjct: 301 CSSG--RWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIP 358

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           + +T + +I+       G C +NR+  A  +F  M   G  P++IT+ TLI+G+C    +
Sbjct: 359 NTITYSSMID-------GFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRI 411

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
              + L  +M     E GL++ T   +Y+ +I      G ++ A +L  EM   G+ P +
Sbjct: 412 DDGMELLHEMT----ETGLVADTT--TYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDI 465

Query: 229 VVCTTLIHGFCCAGNWEEVNGLFIEM------LDL-----GPRPNLLTFNVMIDCLCKGG 277
           V C TL+ G C  G  ++   +F  M      LD      G  P++ T+N++I  L   G
Sbjct: 466 VTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEG 525

Query: 278 KINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYN 337
           K  EA  L E M  RG+ PD  TY+S++DG C   R+D A ++F SM SK     VV++ 
Sbjct: 526 KFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFT 585

Query: 338 ILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLY 397
            LINGYCK   V++ + L+ ++   G+    ITY TL+ G  + G    A  +F EM   
Sbjct: 586 TLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISS 645

Query: 398 NVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMN 432
            V PD  T   ++ GL     ++ AV +   L+M+
Sbjct: 646 GVYPDTITIRNMLTGLWSKEELKRAVAMLEKLQMS 680



 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 59/248 (23%), Positives = 126/248 (50%), Gaps = 1/248 (0%)

Query: 339 LINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYN 398
           L +G+ +I  +E+A+ L+  ++ +    +V+ +  L+  + +  +      L+ +M+   
Sbjct: 50  LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109

Query: 399 VEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAW 458
           +  D+ ++NILI   C  + +  A+  F  +        +  F  L+ GLC   R+  A 
Sbjct: 110 IRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEAL 169

Query: 459 ELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGF 518
            LFH++ +    P VVT++ +++GLCR+G++ +A   L  M ++G  P  +T+ T++ G 
Sbjct: 170 NLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGM 229

Query: 519 LQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKSSYRACLYV 578
            +   T   + LL KM E   +++P+   +S ++D L KD ++ +   +        ++ 
Sbjct: 230 CKKGDTVSALNLLRKMEEVS-HIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFP 288

Query: 579 TIFQPSSL 586
            +F  +S+
Sbjct: 289 DLFTYNSM 296


>gi|221554580|gb|ACM24117.1| PPR protein [Raphanus sativus]
          Length = 688

 Score =  316 bits (809), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 198/612 (32%), Positives = 302/612 (49%), Gaps = 78/612 (12%)

Query: 9   CLFSSETVSKVKLSSLF--KSPRQIAAVSSPETQLNEFLHENCK--SG---IINLNEARY 61
           C F   +      + LF  +S R   A +S E+    F  E+ K  SG   I  L +A  
Sbjct: 6   CGFKCSSSPAESAARLFCTRSIRDTLAKASGESCEAGFGGESLKLQSGFHEIKGLEDAID 65

Query: 62  FFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFG 121
            F  M   +P P +  F  L G V +    D VIS Y+K+    +  D  + NILI CF 
Sbjct: 66  LFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNILIKCFC 125

Query: 122 NKER----------------------------GLCVENRIKEATWLFKNMIAFGVRPDVI 153
           +  +                            GLCVE+R+ EA   F  M     RP+V+
Sbjct: 126 SCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETTCRPNVV 185

Query: 154 TYGTLINGFCRTGNLSVALRLHKKMVS----------GDYENGLISK------------- 190
           T+ TL+NG CR G +  A+ L  +M+           G   +G+  K             
Sbjct: 186 TFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKM 245

Query: 191 -------TNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGN 243
                   N+  YS IIDSLCK+G    A+ LF EM+ +GI P +    ++I GFC +G 
Sbjct: 246 EEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGR 305

Query: 244 WEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNS 303
           W +   L  EML+    P+++T+N +I+   K GK  EA  L + M+ RG+ P+  TYNS
Sbjct: 306 WSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNS 365

Query: 304 LMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNG 363
           ++DG+C   R+D A ++F  M +KGC   V ++  LI+GYC    +++ M L  ++   G
Sbjct: 366 MIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRG 425

Query: 364 VRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAV 423
           +    +TYNTL+ G    G    A  L  +M    V PD+ T N L+DGLC N  +++A+
Sbjct: 426 LVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDAL 485

Query: 424 KLFHMLEMNKFEF-------GIE----IFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPT 472
           ++F  ++ +K +        G+E     +N LI GL   G+   A EL+ ++P +G+VP 
Sbjct: 486 EMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPD 545

Query: 473 VVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLH 532
            +TYS MI GLC++ +L++A    + M     +PNVVTFNTL++G+ +  +    +EL  
Sbjct: 546 TITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFC 605

Query: 533 KMAEPERNLVPD 544
           +M    R +V D
Sbjct: 606 EMG--RRGIVAD 615



 Score =  226 bits (576), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 139/476 (29%), Positives = 230/476 (48%), Gaps = 51/476 (10%)

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
           +++A  LF +M+     P V+ +  L+    R     + + L++KM     E   I + +
Sbjct: 60  LEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKM-----ERKQI-RCD 113

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
           I+S++I+I   C    +  A   F ++   G++P VV  TTL+HG C      E    F 
Sbjct: 114 IYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFH 173

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV- 311
           +M +   RPN++TF  +++ LC+ G+I EA  LL+ M++ GL P + TY +++DG C   
Sbjct: 174 QMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKG 233

Query: 312 -----------------------------------GRIDTAREIFLSMHSKGCKHTVVSY 336
                                              GR   A+ +F  M  KG    + +Y
Sbjct: 234 DTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTY 293

Query: 337 NILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKL 396
           N +I G+C      +A  L ++++   +   V+TYN L++   + G+   A +L+DEM  
Sbjct: 294 NSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAAELYDEMLP 353

Query: 397 YNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDN 456
             + P+  TYN +IDG CK + +  A  +F+++        +  F  LIDG C A R+D+
Sbjct: 354 RGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDD 413

Query: 457 AWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMH 516
             EL H++P++GLV   VTY+ +IHG C  G L  A D    M  +G  P++VT NTL+ 
Sbjct: 414 GMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLD 473

Query: 517 GFLQNNKTSKVVELLHKM---------AEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
           G   N K    +E+   M         + P   + PD  T++I++  L  + K+ E
Sbjct: 474 GLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLE 529



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 122/395 (30%), Positives = 196/395 (49%), Gaps = 26/395 (6%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           C SG    ++A      M   + SP + ++N L  A  K   +      Y +++  G++P
Sbjct: 301 CSSG--RWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIP 358

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           + +T N +I+       G C ++R+  A  +F  M   G  PDV T+ TLI+G+C    +
Sbjct: 359 NTITYNSMID-------GFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRI 411

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
              + L  +M       GL++  N  +Y+ +I   C  G ++ A +L  +M   G+ P +
Sbjct: 412 DDGMELLHEMP----RRGLVA--NTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDI 465

Query: 229 VVCTTLIHGFCCAGNWEEVNGLFIEM----LDL-------GPRPNLLTFNVMIDCLCKGG 277
           V C TL+ G C  G  ++   +F  M    +DL       G  P++LT+N++I  L   G
Sbjct: 466 VTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEG 525

Query: 278 KINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYN 337
           K  EA  L E M  RG+ PD  TY+S++DG C   R+D A ++F+SM SK     VV++N
Sbjct: 526 KFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFN 585

Query: 338 ILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLY 397
            LINGYCK   V++ + L+ ++   G+    I Y TL+ G  + G    A  +F EM   
Sbjct: 586 TLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISS 645

Query: 398 NVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMN 432
            V PD  T   ++ G      ++ AV +   L+M+
Sbjct: 646 GVYPDTITIRNMLTGFWSKEELERAVAMLEDLQMS 680



 Score =  108 bits (271), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 69/300 (23%), Positives = 139/300 (46%), Gaps = 38/300 (12%)

Query: 304 LMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNG 363
           L  G+  +  ++ A ++F  M       +VV +  L+    ++   +  +SLY+++    
Sbjct: 50  LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109

Query: 364 VRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAV 423
           +R  + ++N L+       +  +A   F ++    + PD+ T+  L+ GLC  + V EA+
Sbjct: 110 IRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEAL 169

Query: 424 KLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGL 483
             FH +        +  F  L++GLC+ GR+  A  L  ++ + GL PT +TY  ++ G+
Sbjct: 170 DFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGM 229

Query: 484 CRKG----------KLEK--------------------------ANDFLLYMEKNGCAPN 507
           C+KG          K+E+                          A +    M++ G  P+
Sbjct: 230 CKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPD 289

Query: 508 VVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAV 567
           + T+N+++ GF  + + S   +LL +M   ER + PD  T++ +++   K+ K+ E + +
Sbjct: 290 LFTYNSMIVGFCSSGRWSDAEQLLQEML--ERKISPDVVTYNALINAFVKEGKFFEAAEL 347



 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 58/248 (23%), Positives = 126/248 (50%), Gaps = 1/248 (0%)

Query: 339 LINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYN 398
           L +G+ +I  +E+A+ L+  ++ +    +V+ +  L+  + +  +      L+ +M+   
Sbjct: 50  LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109

Query: 399 VEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAW 458
           +  D+ ++NILI   C  + +  A+  F  +        +  F  L+ GLC   R+  A 
Sbjct: 110 IRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEAL 169

Query: 459 ELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGF 518
           + FH++ +    P VVT++ +++GLCR+G++ +A   L  M ++G  P  +T+ T++ G 
Sbjct: 170 DFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGM 229

Query: 519 LQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKSSYRACLYV 578
            +   T   + LL KM E   +++P+   +S ++D L KD ++ +   +        ++ 
Sbjct: 230 CKKGDTVSALNLLRKMEEVS-HIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFP 288

Query: 579 TIFQPSSL 586
            +F  +S+
Sbjct: 289 DLFTYNSM 296


>gi|238908350|emb|CAZ40335.1| non restoring pentatricopeptide repeat [Raphanus sativus]
          Length = 683

 Score =  315 bits (806), Expect = 5e-83,   Method: Compositional matrix adjust.
 Identities = 187/562 (33%), Positives = 279/562 (49%), Gaps = 77/562 (13%)

Query: 53  IINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRK------------ 100
           I  L +A   F  M   +P P +  FN L GAV +    D VIS Y+K            
Sbjct: 59  IKGLEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYS 118

Query: 101 -----------------------LVSIGLLPDFLTLNILIN------------------- 118
                                  L  +GL PD +T   L++                   
Sbjct: 119 FTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQIC 178

Query: 119 -----CFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALR 173
                 F     GLC E R+ EA  L   M+  G++PD ITYGT ++G C+ G+   AL 
Sbjct: 179 RPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALN 238

Query: 174 LHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTT 233
           L +KM     E     K N+  YS IID LCK+G    +  LF+EM+ +GI P +V    
Sbjct: 239 LLRKM-----EEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNC 293

Query: 234 LIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRG 293
           +I GFC +G W     L  EML+    PN++T+N +I+   K GK  EA  L + M+ RG
Sbjct: 294 MIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRG 353

Query: 294 LNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAM 353
           + P+  TYNS++DG+C   R+D A ++F  M +KGC   V ++  LI+GYC    +++ M
Sbjct: 354 IIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGM 413

Query: 354 SLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGL 413
            L  ++   G+    +TYNTL+ G    G    A  L  +M    V PD+ T N L+DGL
Sbjct: 414 ELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGL 473

Query: 414 CKNNCVQEAVKLFHMLEMNKFEF-------GIE----IFNCLIDGLCKAGRLDNAWELFH 462
           C N  +++A+++F  ++ +K +        G+E     +N LI GL   G+   A EL+ 
Sbjct: 474 CDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYE 533

Query: 463 KLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNN 522
           ++P +G+VP  +TYS MI GLC++ +L++A    + M     +PNVVTFNTL++G+ +  
Sbjct: 534 EMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAG 593

Query: 523 KTSKVVELLHKMAEPERNLVPD 544
           +    +EL  +M    R +V D
Sbjct: 594 RVDDGLELFCEMG--RRGIVAD 613



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 122/398 (30%), Positives = 196/398 (49%), Gaps = 26/398 (6%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           C SG    + A+     M   + SP + ++N L  A  K   +      Y +++  G++P
Sbjct: 299 CISG--RWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIP 356

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           + +T N +I+       G C ++R+  A  +F  M   G  PDV T+ TLI+G+C    +
Sbjct: 357 NTITYNSMID-------GFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRI 409

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
              + L  +M       GL++  N  +Y+ +I   C  G ++ A +L  +M   G+ P +
Sbjct: 410 DDGMELLHEMP----RRGLVA--NTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDI 463

Query: 229 VVCTTLIHGFCCAGNWEEVNGLFIEM----LDL-------GPRPNLLTFNVMIDCLCKGG 277
           V C TL+ G C  G  ++   +F  M    +DL       G  P++LT+N++I  L   G
Sbjct: 464 VTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEG 523

Query: 278 KINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYN 337
           K  EA  L E M  RG+ PD  TY+S++DG C   R+D A ++F+SM SK     VV++N
Sbjct: 524 KFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFN 583

Query: 338 ILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLY 397
            LINGYCK   V++ + L+ ++   G+    I Y TL+ G  + G    A  +F EM   
Sbjct: 584 TLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISS 643

Query: 398 NVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFE 435
            V PD  T   ++ G      ++ AV +   L+  + E
Sbjct: 644 GVYPDTITIRNMLTGFWSKEELERAVAMLEDLQRYQLE 681



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 94/317 (29%), Positives = 167/317 (52%), Gaps = 7/317 (2%)

Query: 245 EEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSL 304
           E+   LF +ML   P P+++ FN ++  + +  + +    L + M ++ +  D +++  L
Sbjct: 63  EDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTIL 122

Query: 305 MDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGV 364
           +  +C   ++  A   F  +   G    VV++  L++G C    V EA+ L+ QI     
Sbjct: 123 IKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQI----C 178

Query: 365 RQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVK 424
           R  V+T+ TL++GL + G+   A  L D M    ++PD  TY   +DG+CK      A+ 
Sbjct: 179 RPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALN 238

Query: 425 LFH-MLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGL 483
           L   M E++  +  + I++ +IDGLCK GR  ++  LF ++  KG+ P +VTY+ MI G 
Sbjct: 239 LLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGF 298

Query: 484 CRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVP 543
           C  G+   A   L  M +   +PNVVT+N L++ F++  K  +  EL  +M    R ++P
Sbjct: 299 CISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEML--PRGIIP 356

Query: 544 DDTTFSIVVDLLAKDEK 560
           +  T++ ++D   K ++
Sbjct: 357 NTITYNSMIDGFCKQDR 373



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 67/290 (23%), Positives = 133/290 (45%), Gaps = 42/290 (14%)

Query: 314 IDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNT 373
           ++ A ++F  M       +V+ +N L+    ++   +  +SLY+++    +R  + ++  
Sbjct: 62  LEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTI 121

Query: 374 LLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNK 433
           L+       +  +A   F ++    + PD+ T+  L+ GLC ++ V EA+ LFH +    
Sbjct: 122 LIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQI---- 177

Query: 434 FEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLV----------------------- 470
               +  F  L++GLC+ GR+  A  L  ++ + GL                        
Sbjct: 178 CRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSAL 237

Query: 471 -------------PTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHG 517
                        P VV YS +I GLC+ G+   +++  + M+  G  PN+VT+N ++ G
Sbjct: 238 NLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGG 297

Query: 518 FLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAV 567
           F  + + S    LL +M   ER + P+  T++ +++   K+ K+ E + +
Sbjct: 298 FCISGRWSAAQRLLQEML--ERKISPNVVTYNALINAFVKEGKFFEAAEL 345



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 55/184 (29%), Positives = 86/184 (46%), Gaps = 6/184 (3%)

Query: 374 LLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNK 433
           L SG ++      A  LF +M      P +  +N L+  + +       + L+  +E  +
Sbjct: 52  LRSGSYEIKGLEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQ 111

Query: 434 FEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKAN 493
               I  F  LI   C   +L  A   F KL + GL P VVT++ ++HGLC   ++ +A 
Sbjct: 112 IRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEAL 171

Query: 494 DFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
           D    +    C P+V+TF TLM+G  +  +  + V LL +M   E  L PD  T+   VD
Sbjct: 172 DLFHQI----CRPDVLTFTTLMNGLCREGRVVEAVALLDRMV--ENGLQPDQITYGTFVD 225

Query: 554 LLAK 557
            + K
Sbjct: 226 GMCK 229


>gi|32527604|gb|AAP86199.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
          Length = 686

 Score =  315 bits (806), Expect = 6e-83,   Method: Compositional matrix adjust.
 Identities = 187/562 (33%), Positives = 279/562 (49%), Gaps = 77/562 (13%)

Query: 53  IINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRK------------ 100
           I  L +A   F  M   +P P +  FN L GAV +    D VIS Y+K            
Sbjct: 59  IKGLEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYS 118

Query: 101 -----------------------LVSIGLLPDFLTLNILIN------------------- 118
                                  L  +GL PD +T   L++                   
Sbjct: 119 FTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQIC 178

Query: 119 -----CFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALR 173
                 F     GLC E R+ EA  L   M+  G++PD ITYGT ++G C+ G+   AL 
Sbjct: 179 RPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALN 238

Query: 174 LHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTT 233
           L +KM     E     K N+  YS IID LCK+G    +  LF+EM+ +GI P +V    
Sbjct: 239 LLRKM-----EEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNC 293

Query: 234 LIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRG 293
           +I GFC +G W     L  EML+    PN++T+N +I+   K GK  EA  L + M+ RG
Sbjct: 294 MIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRG 353

Query: 294 LNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAM 353
           + P+  TYNS++DG+C   R+D A ++F  M +KGC   V ++  LI+GYC    +++ M
Sbjct: 354 IIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGM 413

Query: 354 SLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGL 413
            L  ++   G+    +TYNTL+ G    G    A  L  +M    V PD+ T N L+DGL
Sbjct: 414 ELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGL 473

Query: 414 CKNNCVQEAVKLFHMLEMNKFEF-------GIE----IFNCLIDGLCKAGRLDNAWELFH 462
           C N  +++A+++F  ++ +K +        G+E     +N LI GL   G+   A EL+ 
Sbjct: 474 CDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYE 533

Query: 463 KLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNN 522
           ++P +G+VP  +TYS MI GLC++ +L++A    + M     +PNVVTFNTL++G+ +  
Sbjct: 534 EMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAG 593

Query: 523 KTSKVVELLHKMAEPERNLVPD 544
           +    +EL  +M    R +V D
Sbjct: 594 RVDDGLELFCEMG--RRGIVAD 613



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 122/395 (30%), Positives = 196/395 (49%), Gaps = 26/395 (6%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           C SG    + A+     M   + SP + ++N L  A  K   +      Y +++  G++P
Sbjct: 299 CISG--RWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIP 356

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           + +T N +I+       G C ++R+  A  +F  M   G  PDV T+ TLI+G+C    +
Sbjct: 357 NTITYNSMID-------GFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRI 409

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
              + L  +M       GL++  N  +Y+ +I   C  G ++ A +L  +M   G+ P +
Sbjct: 410 DDGMELLHEMP----RRGLVA--NTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDI 463

Query: 229 VVCTTLIHGFCCAGNWEEVNGLFIEM----LDL-------GPRPNLLTFNVMIDCLCKGG 277
           V C TL+ G C  G  ++   +F  M    +DL       G  P++LT+N++I  L   G
Sbjct: 464 VTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEG 523

Query: 278 KINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYN 337
           K  EA  L E M  RG+ PD  TY+S++DG C   R+D A ++F+SM SK     VV++N
Sbjct: 524 KFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFN 583

Query: 338 ILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLY 397
            LINGYCK   V++ + L+ ++   G+    I Y TL+ G  + G    A  +F EM   
Sbjct: 584 TLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISS 643

Query: 398 NVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMN 432
            V PD  T   ++ G      ++ AV +   L+M+
Sbjct: 644 GVYPDTITIRNMLTGFWSKEELERAVAMLEDLQMS 678



 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 94/317 (29%), Positives = 167/317 (52%), Gaps = 7/317 (2%)

Query: 245 EEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSL 304
           E+   LF +ML   P P+++ FN ++  + +  + +    L + M ++ +  D +++  L
Sbjct: 63  EDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTIL 122

Query: 305 MDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGV 364
           +  +C   ++  A   F  +   G    VV++  L++G C    V EA+ L+ QI     
Sbjct: 123 IKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQI----C 178

Query: 365 RQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVK 424
           R  V+T+ TL++GL + G+   A  L D M    ++PD  TY   +DG+CK      A+ 
Sbjct: 179 RPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALN 238

Query: 425 LFH-MLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGL 483
           L   M E++  +  + I++ +IDGLCK GR  ++  LF ++  KG+ P +VTY+ MI G 
Sbjct: 239 LLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGF 298

Query: 484 CRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVP 543
           C  G+   A   L  M +   +PNVVT+N L++ F++  K  +  EL  +M    R ++P
Sbjct: 299 CISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEML--PRGIIP 356

Query: 544 DDTTFSIVVDLLAKDEK 560
           +  T++ ++D   K ++
Sbjct: 357 NTITYNSMIDGFCKQDR 373



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 67/290 (23%), Positives = 133/290 (45%), Gaps = 42/290 (14%)

Query: 314 IDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNT 373
           ++ A ++F  M       +V+ +N L+    ++   +  +SLY+++    +R  + ++  
Sbjct: 62  LEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTI 121

Query: 374 LLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNK 433
           L+       +  +A   F ++    + PD+ T+  L+ GLC ++ V EA+ LFH +    
Sbjct: 122 LIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQI---- 177

Query: 434 FEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLV----------------------- 470
               +  F  L++GLC+ GR+  A  L  ++ + GL                        
Sbjct: 178 CRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSAL 237

Query: 471 -------------PTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHG 517
                        P VV YS +I GLC+ G+   +++  + M+  G  PN+VT+N ++ G
Sbjct: 238 NLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGG 297

Query: 518 FLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAV 567
           F  + + S    LL +M   ER + P+  T++ +++   K+ K+ E + +
Sbjct: 298 FCISGRWSAAQRLLQEML--ERKISPNVVTYNALINAFVKEGKFFEAAEL 345



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 55/184 (29%), Positives = 86/184 (46%), Gaps = 6/184 (3%)

Query: 374 LLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNK 433
           L SG ++      A  LF +M      P +  +N L+  + +       + L+  +E  +
Sbjct: 52  LRSGSYEIKGLEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQ 111

Query: 434 FEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKAN 493
               I  F  LI   C   +L  A   F KL + GL P VVT++ ++HGLC   ++ +A 
Sbjct: 112 IRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEAL 171

Query: 494 DFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
           D    +    C P+V+TF TLM+G  +  +  + V LL +M   E  L PD  T+   VD
Sbjct: 172 DLFHQI----CRPDVLTFTTLMNGLCREGRVVEAVALLDRMV--ENGLQPDQITYGTFVD 225

Query: 554 LLAK 557
            + K
Sbjct: 226 GMCK 229


>gi|224126843|ref|XP_002319940.1| predicted protein [Populus trichocarpa]
 gi|222858316|gb|EEE95863.1| predicted protein [Populus trichocarpa]
          Length = 555

 Score =  315 bits (806), Expect = 6e-83,   Method: Compositional matrix adjust.
 Identities = 176/482 (36%), Positives = 269/482 (55%), Gaps = 38/482 (7%)

Query: 55  NLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLN 114
           N+N+A   F +M +  P P I  F  LF A+ + +HY  V+S  +++   G+  D L+L 
Sbjct: 71  NINDALSAFNHMVNTNPLPSIVKFGELFSALVRMKHYKTVVSLSKQMEMAGISHDVLSLT 130

Query: 115 ILINCF----------------------------GNKERGLCVENRIKEATWLFKNMIAF 146
           ILINCF                                 G C+E +I  A  LF  M+A 
Sbjct: 131 ILINCFCRLCHVDYGFSVLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVAR 190

Query: 147 GVRPDVITYGTLINGFCRTGNLSVALRL--HKKMVSGDYENGLISKTNIFSYSIIIDSLC 204
           G +P+V +Y  +I G CR G  +  ++L  H K+V          + ++  Y+ I+D LC
Sbjct: 191 GYKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVG--------CEPDVVIYNTIVDRLC 242

Query: 205 KEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLL 264
           K+ LV++A  +F +MKG GI P VV  T+LIHG    G W+E  GL  EM      P+L+
Sbjct: 243 KDRLVNEAVHIFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLV 302

Query: 265 TFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSM 324
            F+V+ID +CK G+++EA  +L+ M + G+ PD  TYN+LM+GYCL   +  AR++F  M
Sbjct: 303 AFSVLIDIMCKEGEVSEARVILKTMTEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVM 362

Query: 325 HSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQA 384
            SKG    V S++IL+NGYCK   ++EA  L+ ++   G+    ++YNTL+SGL QA + 
Sbjct: 363 ISKGRMPDVFSFSILVNGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQARRP 422

Query: 385 GYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCL 444
             A++LF +M      P+L TY+IL+D L K   + +A+ LF  +E +  +  +  +N +
Sbjct: 423 LEAEELFKDMHSNGYPPNLVTYSILLDCLSKQGYLDQAMGLFRAMENSGLKPDLVTYNIM 482

Query: 445 IDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGC 504
           IDG+CK G+  +A ELF +L  KGL P     +  I G+C+ G L++A+     MEK+ C
Sbjct: 483 IDGMCKYGKFKDARELFAELSVKGLQPNNWVCTPTIDGVCKGGLLDEAHKAFRQMEKDDC 542

Query: 505 AP 506
           +P
Sbjct: 543 SP 544



 Score =  182 bits (461), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 123/427 (28%), Positives = 209/427 (48%), Gaps = 45/427 (10%)

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
           I +A   F +M+     P ++ +G L +   R  +    + L K+M     E   IS  +
Sbjct: 72  INDALSAFNHMVNTNPLPSIVKFGELFSALVRMKHYKTVVSLSKQM-----EMAGISH-D 125

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
           + S +I+I+  C+   VD                         +GF   G          
Sbjct: 126 VLSLTILINCFCRLCHVD-------------------------YGFSVLG---------- 150

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
           +++ LG  PN++TF+ +I+  C  GKI  A  L ++M+ RG  P+  +Y+ ++ G C VG
Sbjct: 151 KIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVARGYKPNVHSYSIIIKGLCRVG 210

Query: 313 RIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYN 372
           +     ++   M   GC+  VV YN +++  CK   V EA+ ++ ++   G+  TV+TY 
Sbjct: 211 KTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEAVHIFCKMKGTGILPTVVTYT 270

Query: 373 TLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEA-VKLFHMLEM 431
           +L+ GL   G+   A  L +EMK  N+ PDL  +++LID +CK   V EA V L  M EM
Sbjct: 271 SLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLIDIMCKEGEVSEARVILKTMTEM 330

Query: 432 NKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEK 491
              E  +  +N L++G C    +  A ++F  +  KG +P V ++SI+++G C+  ++++
Sbjct: 331 G-VEPDVATYNTLMNGYCLRMEVVEARKVFEVMISKGRMPDVFSFSILVNGYCKAKRIDE 389

Query: 492 ANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIV 551
           A      M   G  P+ V++NTL+ G  Q  +  +  EL   M        P+  T+SI+
Sbjct: 390 AKQLFDEMTHRGLIPDTVSYNTLISGLCQARRPLEAEELFKDMH--SNGYPPNLVTYSIL 447

Query: 552 VDLLAKD 558
           +D L+K 
Sbjct: 448 LDCLSKQ 454



 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 92/375 (24%), Positives = 184/375 (49%), Gaps = 8/375 (2%)

Query: 243 NWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYN 302
           N  +    F  M++  P P+++ F  +   L +         L + M   G++ D  +  
Sbjct: 71  NINDALSAFNHMVNTNPLPSIVKFGELFSALVRMKHYKTVVSLSKQMEMAGISHDVLSLT 130

Query: 303 SLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISN 362
            L++ +C +  +D    +   +   G +  V++++ LING+C    +  A+ L+  +++ 
Sbjct: 131 ILINCFCRLCHVDYGFSVLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVAR 190

Query: 363 GVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEA 422
           G +  V +Y+ ++ GL + G+     KL + MK+   EPD+  YN ++D LCK+  V EA
Sbjct: 191 GYKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEA 250

Query: 423 VKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHG 482
           V +F  ++       +  +  LI GL   GR   A+ L +++    ++P +V +S++I  
Sbjct: 251 VHIFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLIDI 310

Query: 483 LCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLV 542
           +C++G++ +A   L  M + G  P+V T+NTLM+G+    +  +  ++   M    R  +
Sbjct: 311 MCKEGEVSEARVILKTMTEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMISKGR--M 368

Query: 543 PDDTTFSIVVDLLAKDEKYHECSAV-SKSSYRACLYVTIFQPSSLGSMIGCTVRLMPQPE 601
           PD  +FSI+V+   K ++  E   +  + ++R  +  T+   + +  +  C  R   +P 
Sbjct: 369 PDVFSFSILVNGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTLISGL--CQAR---RPL 423

Query: 602 MSDTLGDDGDGNAGP 616
            ++ L  D   N  P
Sbjct: 424 EAEELFKDMHSNGYP 438



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 51/180 (28%), Positives = 87/180 (48%), Gaps = 17/180 (9%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CK+    ++EA+  F  MTH    P   S+N L   + + R        ++ + S G  P
Sbjct: 382 CKAK--RIDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQARRPLEAEELFKDMHSNGYPP 439

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           + +T +IL++C       L  +  + +A  LF+ M   G++PD++TY  +I+G C+ G  
Sbjct: 440 NLVTYSILLDC-------LSKQGYLDQAMGLFRAMENSGLKPDLVTYNIMIDGMCKYGKF 492

Query: 169 SVALRLHKKM-VSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPA 227
             A  L  ++ V G   N  +    I       D +CK GL+D+A + F +M+    +PA
Sbjct: 493 KDARELFAELSVKGLQPNNWVCTPTI-------DGVCKGGLLDEAHKAFRQMEKDDCSPA 545


>gi|30840221|emb|CAD61285.1| fertility restorer [Raphanus sativus]
 gi|32452380|emb|CAD80165.1| restorer of fertility pentatricopeptide repeat [Raphanus sativus]
 gi|32527602|gb|AAP86198.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
 gi|90903522|gb|ABE02309.1| Rf [Raphanus sativus]
 gi|90903524|gb|ABE02310.1| Rf [Raphanus sativus]
 gi|157931524|gb|ABW04886.1| PPR [Raphanus sativus]
          Length = 687

 Score =  315 bits (806), Expect = 7e-83,   Method: Compositional matrix adjust.
 Identities = 194/620 (31%), Positives = 305/620 (49%), Gaps = 78/620 (12%)

Query: 9   CLFSSETVSKVKLSSLF--KSPRQIAAVSSPETQLNEFLHENCK--SG---IINLNEARY 61
           C F   +      + LF  +S R   A +S E+    F  E+ K  SG   I  L +A  
Sbjct: 6   CGFKCSSSPAESAARLFCTRSIRDTLAKASGESCEAGFGGESLKLQSGFHEIKGLEDAID 65

Query: 62  FFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFG 121
            F  M   +P P +  F  L G V +    D VIS Y+K+    +  D  + NILI CF 
Sbjct: 66  LFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNILIKCFC 125

Query: 122 NKER----------------------------GLCVENRIKEATWLFKNMIAFGVRPDVI 153
           +  +                            GLCVE+R+ EA   F  M     RP+V+
Sbjct: 126 SCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETTCRPNVV 185

Query: 154 TYGTLINGFCRTGNLSVALRLHKKMVS----------GDYENGLISK------------- 190
           T+ TL+NG CR G +  A+ L  +M+           G   +G+  K             
Sbjct: 186 TFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKM 245

Query: 191 -------TNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGN 243
                   N+  YS IIDSLCK+G    A+ LF EM+ +GI P +    ++I GFC +G 
Sbjct: 246 EEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGR 305

Query: 244 WEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNS 303
           W +   L  EML+    P+++T+N +I+   K GK  EA  L + M+ RG+ P+  TY+S
Sbjct: 306 WSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSS 365

Query: 304 LMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNG 363
           ++DG+C   R+D A  +F  M +KGC   ++++N LI+GYC    +++ M L  ++   G
Sbjct: 366 MIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETG 425

Query: 364 VRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAV 423
           +     TYNTL+ G +  G    A  L  EM    + PD+ T + L+DGLC N  +++A+
Sbjct: 426 LVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDAL 485

Query: 424 KLFHMLEMNK-----------FEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPT 472
           ++F +++ +K            E  ++ +N LI GL   G+   A EL+ ++P +G+VP 
Sbjct: 486 EMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPD 545

Query: 473 VVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLH 532
            +TYS MI GLC++ +L++A      M     +PNVVTF TL++G+ +  +    +EL  
Sbjct: 546 TITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFC 605

Query: 533 KMAEPERNLVPDDTTFSIVV 552
           +M    R +V +  T+  ++
Sbjct: 606 EMG--RRGIVANAITYITLI 623



 Score =  222 bits (565), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 146/521 (28%), Positives = 250/521 (47%), Gaps = 53/521 (10%)

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
           +++A  LF +M+     P V+ +  L+    R     + + L++KM     E   I + +
Sbjct: 60  LEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKM-----ERKQI-RCD 113

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
           I+S++I+I   C    +  A   F ++   G++P VV  TTL+HG C      E    F 
Sbjct: 114 IYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFH 173

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV- 311
           +M +   RPN++TF  +++ LC+ G+I EA  LL+ M++ GL P + TY +++DG C   
Sbjct: 174 QMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKG 233

Query: 312 -----------------------------------GRIDTAREIFLSMHSKGCKHTVVSY 336
                                              GR   A+ +F  M  KG    + +Y
Sbjct: 234 DTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTY 293

Query: 337 NILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKL 396
           N +I G+C      +A  L ++++   +   V+TYN L++   + G+   A++L+DEM  
Sbjct: 294 NSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLP 353

Query: 397 YNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDN 456
             + P+  TY+ +IDG CK N +  A  +F+++        +  FN LIDG C A R+D+
Sbjct: 354 RGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDD 413

Query: 457 AWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMH 516
             EL H++ + GLV    TY+ +IHG    G L  A D L  M  +G  P++VT +TL+ 
Sbjct: 414 GMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLD 473

Query: 517 GFLQNNKTSKVVELLHKMAEPERNL---------VPDDTTFSIVVDLLAKDEKYHECSAV 567
           G   N K    +E+   M + +++L          PD  T++I++  L  + K+ E   +
Sbjct: 474 GLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEEL 533

Query: 568 -SKSSYRACLYVTIFQPSSLGSMIGCTVRLMPQPEMSDTLG 607
             +  +R  +  TI   S +  +   + RL    +M D++G
Sbjct: 534 YEEMPHRGIVPDTITYSSMIDGLCKQS-RLDEATQMFDSMG 573



 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 122/395 (30%), Positives = 195/395 (49%), Gaps = 26/395 (6%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           C SG    ++A      M   + SP + ++N L  A  K   +      Y +++  G++P
Sbjct: 301 CSSG--RWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIP 358

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           + +T + +I+       G C +NR+  A  +F  M   G  P++IT+ TLI+G+C    +
Sbjct: 359 NTITYSSMID-------GFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRI 411

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
              + L  +M     E GL++ T   +Y+ +I      G ++ A +L  EM   G+ P +
Sbjct: 412 DDGMELLHEMT----ETGLVADTT--TYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDI 465

Query: 229 VVCTTLIHGFCCAGNWEEVNGLFIEM------LDL-----GPRPNLLTFNVMIDCLCKGG 277
           V C TL+ G C  G  ++   +F  M      LD      G  P++ T+N++I  L   G
Sbjct: 466 VTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEG 525

Query: 278 KINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYN 337
           K  EA  L E M  RG+ PD  TY+S++DG C   R+D A ++F SM SK     VV++ 
Sbjct: 526 KFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFT 585

Query: 338 ILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLY 397
            LINGYCK   V++ + L+ ++   G+    ITY TL+ G  + G    A  +F EM   
Sbjct: 586 TLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISS 645

Query: 398 NVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMN 432
            V PD  T   ++ GL     ++ AV +   L+M+
Sbjct: 646 GVYPDTITIRNMLTGLWSKEELKRAVAMLEKLQMS 680



 Score =  102 bits (253), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 58/248 (23%), Positives = 126/248 (50%), Gaps = 1/248 (0%)

Query: 339 LINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYN 398
           L +G+ +I  +E+A+ L+  ++ +    +V+ +  L+  + +  +      L+ +M+   
Sbjct: 50  LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109

Query: 399 VEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAW 458
           +  D+ ++NILI   C  + +  A+  F  +        +  F  L+ GLC   R+  A 
Sbjct: 110 IRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEAL 169

Query: 459 ELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGF 518
           + FH++ +    P VVT++ +++GLCR+G++ +A   L  M ++G  P  +T+ T++ G 
Sbjct: 170 DFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGM 229

Query: 519 LQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKSSYRACLYV 578
            +   T   + LL KM E   +++P+   +S ++D L KD ++ +   +        ++ 
Sbjct: 230 CKKGDTVSALNLLRKMEEVS-HIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFP 288

Query: 579 TIFQPSSL 586
            +F  +S+
Sbjct: 289 DLFTYNSM 296


>gi|152717466|dbj|BAF73724.1| pentatricopeptide repeat protein [Raphanus sativus]
          Length = 687

 Score =  314 bits (804), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 194/620 (31%), Positives = 305/620 (49%), Gaps = 78/620 (12%)

Query: 9   CLFSSETVSKVKLSSLF--KSPRQIAAVSSPETQLNEFLHENCK--SG---IINLNEARY 61
           C F   +      + LF  +S R   A +S E+    F  E+ K  SG   I  L +A  
Sbjct: 6   CGFKCSSSPAESAARLFCTRSIRDTLAKASGESCEAGFGGESLKLQSGFHEIKGLEDAID 65

Query: 62  FFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFG 121
            F  M   +P P +  F  L G V +    D VIS Y+K+    +  D  +  ILI CF 
Sbjct: 66  LFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFC 125

Query: 122 NKER----------------------------GLCVENRIKEATWLFKNMIAFGVRPDVI 153
           +  +                            GLCVE+R+ EA  LF  M     RP+V+
Sbjct: 126 SCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVV 185

Query: 154 TYGTLINGFCRTGNLSVALRLHKKMVS----------GDYENGLISK------------- 190
           T+ TL+NG CR G +  A+ L  +M+           G   +G+  K             
Sbjct: 186 TFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKM 245

Query: 191 -------TNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGN 243
                   N+  YS IIDSLCK+G    A+ LF EM+ +GI P +    ++I GFC +G 
Sbjct: 246 EEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGR 305

Query: 244 WEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNS 303
           W +   L  EML+    P+++T+N +I+   K GK  EA  L + M+ RG+ P+  TY+S
Sbjct: 306 WSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSS 365

Query: 304 LMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNG 363
           ++DG+C   R+D A  +F  M +KGC   ++++N LI+GYC    +++ M L  ++   G
Sbjct: 366 MIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETG 425

Query: 364 VRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAV 423
           +     TYNTL+ G +  G    A  L  EM    + PD+ T + L+DGLC N  +++A+
Sbjct: 426 LVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDAL 485

Query: 424 KLFHMLEMNK-----------FEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPT 472
           ++F +++ +K            E  ++ +N LI GL   G+   A EL+ ++P +G+VP 
Sbjct: 486 EMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPD 545

Query: 473 VVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLH 532
            +TYS MI GLC++ +L++A      M     +PNVVTF TL++G+ +  +    +EL  
Sbjct: 546 TITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFC 605

Query: 533 KMAEPERNLVPDDTTFSIVV 552
           +M    R +V +  T+  ++
Sbjct: 606 EMG--RRGIVANAITYITLI 623



 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 146/521 (28%), Positives = 250/521 (47%), Gaps = 53/521 (10%)

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
           +++A  LF +M+     P V+ +  L+    R     + + L++KM     E   I + +
Sbjct: 60  LEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKM-----ERKQI-RCD 113

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
           I+S++I+I   C    +  A   F ++   G++P VV   TL+HG C      E   LF 
Sbjct: 114 IYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFH 173

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV- 311
           +M +   RPN++TF  +++ LC+ G+I EA  LL+ M++ GL P + TY +++DG C   
Sbjct: 174 QMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKG 233

Query: 312 -----------------------------------GRIDTAREIFLSMHSKGCKHTVVSY 336
                                              GR   A+ +F  M  KG    + +Y
Sbjct: 234 DTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTY 293

Query: 337 NILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKL 396
           N +I G+C      +A  L ++++   +   V+TYN L++   + G+   A++L+DEM  
Sbjct: 294 NSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLP 353

Query: 397 YNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDN 456
             + P+  TY+ +IDG CK N +  A  +F+++        +  FN LIDG C A R+D+
Sbjct: 354 RGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDD 413

Query: 457 AWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMH 516
             EL H++ + GLV    TY+ +IHG    G L  A D L  M  +G  P++VT +TL+ 
Sbjct: 414 GMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLD 473

Query: 517 GFLQNNKTSKVVELLHKMAEPERNL---------VPDDTTFSIVVDLLAKDEKYHECSAV 567
           G   N K    +E+   M + +++L          PD  T++I++  L  + K+ E   +
Sbjct: 474 GLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEEL 533

Query: 568 -SKSSYRACLYVTIFQPSSLGSMIGCTVRLMPQPEMSDTLG 607
             +  +R  +  TI   S +  +   + RL    +M D++G
Sbjct: 534 YEEMPHRGIVPDTITYSSMIDGLCKQS-RLDEATQMFDSMG 573



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 122/395 (30%), Positives = 195/395 (49%), Gaps = 26/395 (6%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           C SG    ++A      M   + SP + ++N L  A  K   +      Y +++  G++P
Sbjct: 301 CSSG--RWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIP 358

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           + +T + +I+       G C +NR+  A  +F  M   G  P++IT+ TLI+G+C    +
Sbjct: 359 NTITYSSMID-------GFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRI 411

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
              + L  +M     E GL++ T   +Y+ +I      G ++ A +L  EM   G+ P +
Sbjct: 412 DDGMELLHEMT----ETGLVADTT--TYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDI 465

Query: 229 VVCTTLIHGFCCAGNWEEVNGLFIEM------LDL-----GPRPNLLTFNVMIDCLCKGG 277
           V C TL+ G C  G  ++   +F  M      LD      G  P++ T+N++I  L   G
Sbjct: 466 VTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEG 525

Query: 278 KINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYN 337
           K  EA  L E M  RG+ PD  TY+S++DG C   R+D A ++F SM SK     VV++ 
Sbjct: 526 KFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFT 585

Query: 338 ILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLY 397
            LINGYCK   V++ + L+ ++   G+    ITY TL+ G  + G    A  +F EM   
Sbjct: 586 TLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISS 645

Query: 398 NVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMN 432
            V PD  T   ++ GL     ++ AV +   L+M+
Sbjct: 646 GVYPDTITIRNMLTGLWSKEELKRAVAMLEKLQMS 680



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 60/248 (24%), Positives = 126/248 (50%), Gaps = 1/248 (0%)

Query: 339 LINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYN 398
           L +G+ +I  +E+A+ L+  ++ +    +V+ +  L+  + +  +      L+ +M+   
Sbjct: 50  LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109

Query: 399 VEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAW 458
           +  D+ ++ ILI   C  + +  A+  F  L        +  FN L+ GLC   R+  A 
Sbjct: 110 IRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEAL 169

Query: 459 ELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGF 518
            LFH++ +    P VVT++ +++GLCR+G++ +A   L  M ++G  P  +T+ T++ G 
Sbjct: 170 NLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGM 229

Query: 519 LQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKSSYRACLYV 578
            +   T   + LL KM E   +++P+   +S ++D L KD ++ +   +        ++ 
Sbjct: 230 CKKGDTVSALNLLRKMEEVS-HIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFP 288

Query: 579 TIFQPSSL 586
            +F  +S+
Sbjct: 289 DLFTYNSM 296


>gi|30840327|emb|CAD61286.1| fertility restorer homologue [Raphanus sativus]
 gi|134302843|gb|ABO70665.1| restorer-of-fertility [Raphanus sativus]
 gi|157931526|gb|ABW04887.1| PPR [Raphanus sativus]
 gi|194295008|gb|ABO70666.2| restorer-of-fertility [Raphanus sativus]
          Length = 687

 Score =  314 bits (804), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 194/620 (31%), Positives = 305/620 (49%), Gaps = 78/620 (12%)

Query: 9   CLFSSETVSKVKLSSLF--KSPRQIAAVSSPETQLNEFLHENCK--SG---IINLNEARY 61
           C F   +      + LF  +S R   A +S E+    F  E+ K  SG   I  L +A  
Sbjct: 6   CGFKCSSSPAESAARLFCTRSIRDTLAKASGESCEAGFGGESLKLQSGFHEIKGLEDAID 65

Query: 62  FFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFG 121
            F  M   +P P +  F  L G V +    D VIS Y+K+    +  D  +  ILI CF 
Sbjct: 66  LFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFC 125

Query: 122 NKER----------------------------GLCVENRIKEATWLFKNMIAFGVRPDVI 153
           +  +                            GLCVE+R+ EA  LF  M     RP+V+
Sbjct: 126 SCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVV 185

Query: 154 TYGTLINGFCRTGNLSVALRLHKKMVS----------GDYENGLISK------------- 190
           T+ TL+NG CR G +  A+ L  +M+           G   +G+  K             
Sbjct: 186 TFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKM 245

Query: 191 -------TNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGN 243
                   N+  YS IIDSLCK+G    A+ LF EM+ +GI P +    ++I GFC +G 
Sbjct: 246 EEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGR 305

Query: 244 WEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNS 303
           W +   L  EML+    P+++T+N +I+   K GK  EA  L + M+ RG+ P+  TY+S
Sbjct: 306 WSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSS 365

Query: 304 LMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNG 363
           ++DG+C   R+D A  +F  M +KGC   ++++N LI+GYC    +++ M L  ++   G
Sbjct: 366 MIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETG 425

Query: 364 VRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAV 423
           +     TYNTL+ G +  G    A  L  EM    + PD+ T + L+DGLC N  +++A+
Sbjct: 426 LVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDAL 485

Query: 424 KLFHMLEMNK-----------FEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPT 472
           ++F +++ +K            E  ++ +N LI GL   G+   A EL+ ++P +G+VP 
Sbjct: 486 EMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPD 545

Query: 473 VVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLH 532
            +TYS MI GLC++ +L++A      M     +PNVVTF TL++G+ +  +    +EL  
Sbjct: 546 TITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFC 605

Query: 533 KMAEPERNLVPDDTTFSIVV 552
           +M    R +V +  T+  ++
Sbjct: 606 EMG--RRGIVANAITYITLI 623



 Score =  222 bits (565), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 146/521 (28%), Positives = 250/521 (47%), Gaps = 53/521 (10%)

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
           +++A  LF +M+     P V+ +  L+    R     + + L++KM     E   I + +
Sbjct: 60  LEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKM-----ERKQI-RCD 113

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
           I+S++I+I   C    +  A   F ++   G++P VV   TL+HG C      E   LF 
Sbjct: 114 IYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFH 173

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV- 311
           +M +   RPN++TF  +++ LC+ G+I EA  LL+ M++ GL P + TY +++DG C   
Sbjct: 174 QMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKG 233

Query: 312 -----------------------------------GRIDTAREIFLSMHSKGCKHTVVSY 336
                                              GR   A+ +F  M  KG    + +Y
Sbjct: 234 DTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTY 293

Query: 337 NILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKL 396
           N +I G+C      +A  L ++++   +   V+TYN L++   + G+   A++L+DEM  
Sbjct: 294 NSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLP 353

Query: 397 YNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDN 456
             + P+  TY+ +IDG CK N +  A  +F+++        +  FN LIDG C A R+D+
Sbjct: 354 RGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDD 413

Query: 457 AWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMH 516
             EL H++ + GLV    TY+ +IHG    G L  A D L  M  +G  P++VT +TL+ 
Sbjct: 414 GMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLD 473

Query: 517 GFLQNNKTSKVVELLHKMAEPERNL---------VPDDTTFSIVVDLLAKDEKYHECSAV 567
           G   N K    +E+   M + +++L          PD  T++I++  L  + K+ E   +
Sbjct: 474 GLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEEL 533

Query: 568 -SKSSYRACLYVTIFQPSSLGSMIGCTVRLMPQPEMSDTLG 607
             +  +R  +  TI   S +  +   + RL    +M D++G
Sbjct: 534 YEEMPHRGIVPDTITYSSMIDGLCKQS-RLDEATQMFDSMG 573



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 122/395 (30%), Positives = 195/395 (49%), Gaps = 26/395 (6%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           C SG    ++A      M   + SP + ++N L  A  K   +      Y +++  G++P
Sbjct: 301 CSSG--RWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIP 358

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           + +T + +I+       G C +NR+  A  +F  M   G  P++IT+ TLI+G+C    +
Sbjct: 359 NTITYSSMID-------GFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRI 411

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
              + L  +M     E GL++ T   +Y+ +I      G ++ A +L  EM   G+ P +
Sbjct: 412 DDGMELLHEMT----ETGLVADTT--TYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDI 465

Query: 229 VVCTTLIHGFCCAGNWEEVNGLFIEM------LDL-----GPRPNLLTFNVMIDCLCKGG 277
           V C TL+ G C  G  ++   +F  M      LD      G  P++ T+N++I  L   G
Sbjct: 466 VTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEG 525

Query: 278 KINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYN 337
           K  EA  L E M  RG+ PD  TY+S++DG C   R+D A ++F SM SK     VV++ 
Sbjct: 526 KFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFT 585

Query: 338 ILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLY 397
            LINGYCK   V++ + L+ ++   G+    ITY TL+ G  + G    A  +F EM   
Sbjct: 586 TLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISS 645

Query: 398 NVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMN 432
            V PD  T   ++ GL     ++ AV +   L+M+
Sbjct: 646 GVYPDTITIRNMLTGLWSKEELKRAVAMLEKLQMS 680



 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 59/248 (23%), Positives = 126/248 (50%), Gaps = 1/248 (0%)

Query: 339 LINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYN 398
           L +G+ +I  +E+A+ L+  ++ +    +V+ +  L+  + +  +      L+ +M+   
Sbjct: 50  LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109

Query: 399 VEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAW 458
           +  D+ ++ ILI   C  + +  A+  F  +        +  FN L+ GLC   R+  A 
Sbjct: 110 IRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEAL 169

Query: 459 ELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGF 518
            LFH++ +    P VVT++ +++GLCR+G++ +A   L  M ++G  P  +T+ T++ G 
Sbjct: 170 NLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGM 229

Query: 519 LQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKSSYRACLYV 578
            +   T   + LL KM E   +++P+   +S ++D L KD ++ +   +        ++ 
Sbjct: 230 CKKGDTVSALNLLRKMEEVS-HIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFP 288

Query: 579 TIFQPSSL 586
            +F  +S+
Sbjct: 289 DLFTYNSM 296


>gi|152717462|dbj|BAF73723.1| pentatricopeptide repeat protein [Raphanus sativus]
          Length = 687

 Score =  313 bits (802), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 196/620 (31%), Positives = 306/620 (49%), Gaps = 78/620 (12%)

Query: 9   CLFSSETVSKVKLSSLF--KSPRQIAAVSSPETQLNEFLHENCK--SG---IINLNEARY 61
           C F   +      + LF  +S R   A +S E+    F  E+ K  SG   I  L +A  
Sbjct: 6   CGFKCSSSPAESAARLFCTRSIRDTLAKASGESCEAGFGGESLKLQSGFHEIKGLEDAID 65

Query: 62  FFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFG 121
            F  M   +P P +  F  L G V +    D VIS Y+K+    +  D  +  ILI CF 
Sbjct: 66  LFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFC 125

Query: 122 NKER----------------------------GLCVENRIKEATWLFKNMIAFGVRPDVI 153
           +  +                            GLCVE+R+ EA  LF  M     RP+V+
Sbjct: 126 SCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVV 185

Query: 154 TYGTLINGFCRTGNLSVALRLHKKMVS--------------------GDYENGL------ 187
           T+ TL+NG CR G +  A+ L  +M+                     GD  + L      
Sbjct: 186 TFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKIGDTVSALDLLRKM 245

Query: 188 --ISKT--NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGN 243
             IS    N+  YS IIDSLCK+G    A+ LF EM+ +GI P +    ++I GFC +G 
Sbjct: 246 EEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGR 305

Query: 244 WEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNS 303
           W +   L  EML+    P+++T+N +I+   K GK  EA  L + M+ RG+ P+  TY+S
Sbjct: 306 WSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSS 365

Query: 304 LMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNG 363
           ++DG+C   R+D A  +F  M +KGC   ++++N LI+GYC    +++ M L  ++   G
Sbjct: 366 MIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETG 425

Query: 364 VRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAV 423
           +     TYNTL+ G +  G    A  L  EM    + PD+ T + L+DGLC N  +++A+
Sbjct: 426 LVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDAL 485

Query: 424 KLFHMLEMNK-----------FEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPT 472
           ++F +++ +K            E  ++ +N LI GL   G+   A EL+ ++P +G+VP 
Sbjct: 486 EMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPD 545

Query: 473 VVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLH 532
            +TYS MI GLC++ +L++A      M     +PNVVTF TL++G+ +  +    +EL  
Sbjct: 546 TITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFC 605

Query: 533 KMAEPERNLVPDDTTFSIVV 552
           +M    R +V +  T+  ++
Sbjct: 606 EMG--RRGIVANAITYITLI 623



 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 146/521 (28%), Positives = 251/521 (48%), Gaps = 53/521 (10%)

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
           +++A  LF +M+     P V+ +  L+    R     + + L++KM     E   I + +
Sbjct: 60  LEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKM-----ERKQI-RCD 113

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
           I+S++I+I   C    +  A   F ++   G++P VV   TL+HG C      E   LF 
Sbjct: 114 IYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFH 173

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV- 311
           +M +   RPN++TF  +++ LC+ G+I EA  LL+ M++ GL P + TY +++DG C + 
Sbjct: 174 QMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKIG 233

Query: 312 -----------------------------------GRIDTAREIFLSMHSKGCKHTVVSY 336
                                              GR   A+ +F  M  KG    + +Y
Sbjct: 234 DTVSALDLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTY 293

Query: 337 NILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKL 396
           N +I G+C      +A  L ++++   +   V+TYN L++   + G+   A++L+DEM  
Sbjct: 294 NSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLP 353

Query: 397 YNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDN 456
             + P+  TY+ +IDG CK N +  A  +F+++        +  FN LIDG C A R+D+
Sbjct: 354 RGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDD 413

Query: 457 AWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMH 516
             EL H++ + GLV    TY+ +IHG    G L  A D L  M  +G  P++VT +TL+ 
Sbjct: 414 GMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLD 473

Query: 517 GFLQNNKTSKVVELLHKMAEPERNL---------VPDDTTFSIVVDLLAKDEKYHECSAV 567
           G   N K    +E+   M + +++L          PD  T++I++  L  + K+ E   +
Sbjct: 474 GLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEEL 533

Query: 568 -SKSSYRACLYVTIFQPSSLGSMIGCTVRLMPQPEMSDTLG 607
             +  +R  +  TI   S +  +   + RL    +M D++G
Sbjct: 534 YEEMPHRGIVPDTITYSSMIDGLCKQS-RLDEATQMFDSMG 573



 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 122/395 (30%), Positives = 195/395 (49%), Gaps = 26/395 (6%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           C SG    ++A      M   + SP + ++N L  A  K   +      Y +++  G++P
Sbjct: 301 CSSG--RWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIP 358

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           + +T + +I+       G C +NR+  A  +F  M   G  P++IT+ TLI+G+C    +
Sbjct: 359 NTITYSSMID-------GFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRI 411

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
              + L  +M     E GL++ T   +Y+ +I      G ++ A +L  EM   G+ P +
Sbjct: 412 DDGMELLHEMT----ETGLVADTT--TYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDI 465

Query: 229 VVCTTLIHGFCCAGNWEEVNGLFIEM------LDL-----GPRPNLLTFNVMIDCLCKGG 277
           V C TL+ G C  G  ++   +F  M      LD      G  P++ T+N++I  L   G
Sbjct: 466 VTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEG 525

Query: 278 KINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYN 337
           K  EA  L E M  RG+ PD  TY+S++DG C   R+D A ++F SM SK     VV++ 
Sbjct: 526 KFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFT 585

Query: 338 ILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLY 397
            LINGYCK   V++ + L+ ++   G+    ITY TL+ G  + G    A  +F EM   
Sbjct: 586 TLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISS 645

Query: 398 NVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMN 432
            V PD  T   ++ GL     ++ AV +   L+M+
Sbjct: 646 GVYPDTITIRNMLTGLWSKEELKRAVAMLEKLQMS 680



 Score =  102 bits (254), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 59/248 (23%), Positives = 127/248 (51%), Gaps = 1/248 (0%)

Query: 339 LINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYN 398
           L +G+ +I  +E+A+ L+  ++ +    +V+ +  L+  + +  +      L+ +M+   
Sbjct: 50  LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109

Query: 399 VEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAW 458
           +  D+ ++ ILI   C  + +  A+  F  +        +  FN L+ GLC   R+  A 
Sbjct: 110 IRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEAL 169

Query: 459 ELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGF 518
            LFH++ +    P VVT++ +++GLCR+G++ +A   L  M ++G  P  +T+ T++ G 
Sbjct: 170 NLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGM 229

Query: 519 LQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKSSYRACLYV 578
            +   T   ++LL KM E   +++P+   +S ++D L KD ++ +   +        ++ 
Sbjct: 230 CKIGDTVSALDLLRKMEEIS-HIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFP 288

Query: 579 TIFQPSSL 586
            +F  +S+
Sbjct: 289 DLFTYNSM 296


>gi|356561716|ref|XP_003549125.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62930,
           chloroplastic-like [Glycine max]
          Length = 556

 Score =  313 bits (801), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 181/506 (35%), Positives = 270/506 (53%), Gaps = 34/506 (6%)

Query: 57  NEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNIL 116
           N+A   F  M  M+P PP   FN +  ++ K + +   IS  + L   G+  D +TLNIL
Sbjct: 51  NDAVALFNRMLLMRPPPPTFQFNNILSSLVKMQRFPTAISLSKHLDFKGITSDLVTLNIL 110

Query: 117 INCFGNKE----------------------------RGLCVENRIKEATWLFKNMIAFGV 148
           INCF +                              +GLC+   +K+A     +++A   
Sbjct: 111 INCFCHLGQITLSFSVLATILKRGYHPDVITLTTLIKGLCLRGEVKKALKFHDDVVALEF 170

Query: 149 RPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGL 208
           + D I+YGTLING C+ G    A++L + +           K ++  Y+IIIDSLCK  L
Sbjct: 171 QLDRISYGTLINGLCKIGETKAAIQLMRNLEERSI------KPDVVMYNIIIDSLCKNKL 224

Query: 209 VDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNV 268
           V +A  L+ EM  + I P VV  TTLI+GFC  G   E   L  EM      P++ TF++
Sbjct: 225 VGEACNLYSEMNAKQIYPNVVTYTTLIYGFCIMGCLIEAVALLNEMKLKNINPDVYTFSI 284

Query: 269 MIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKG 328
           +ID L K GK+  A  +L +M++  + PD  TYNSL+DGY LV  +  A+ +F SM   G
Sbjct: 285 LIDALGKEGKMKAAKIVLAVMMKAYVKPDVVTYNSLVDGYFLVNEVKHAKYVFNSMAQSG 344

Query: 329 CKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQ 388
               V SY I+I+G CK   V+EA+SL+ ++    V    IT+N+L+ GL ++G+  Y  
Sbjct: 345 VTPGVQSYTIMIDGLCKTKMVDEAISLFEEMKHKNVIPNTITFNSLIDGLCKSGRIAYVW 404

Query: 389 KLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGL 448
            L D+M+  +   D+ TY+ LID LCKN  + +A+ LF  +   + +  +  +  LIDGL
Sbjct: 405 DLVDKMRDRSQLADVITYSSLIDALCKNCHLDQAIALFKKMITQEIQPDMYTYTILIDGL 464

Query: 449 CKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNV 508
           CK GRL  A E+F  L  KG    + TY++MI G C+ G  ++A   L  ME NGC PN 
Sbjct: 465 CKGGRLKIAQEVFQHLLIKGYHLDIRTYTVMISGFCKAGLFDEALALLSKMEDNGCIPNA 524

Query: 509 VTFNTLMHGFLQNNKTSKVVELLHKM 534
           +TF+ ++    + ++  K  +LL +M
Sbjct: 525 ITFDIIICALFEKDENDKAEKLLREM 550



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 111/428 (25%), Positives = 214/428 (50%), Gaps = 8/428 (1%)

Query: 130 ENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLIS 189
            N   +A  LF  M+     P    +  +++   +      A+ L K +   D++ G+ S
Sbjct: 47  HNDHNDAVALFNRMLLMRPPPPTFQFNNILSSLVKMQRFPTAISLSKHL---DFK-GITS 102

Query: 190 KTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNG 249
             ++ + +I+I+  C  G +  +  +   +  RG +P V+  TTLI G C  G  ++   
Sbjct: 103 --DLVTLNILINCFCHLGQITLSFSVLATILKRGYHPDVITLTTLIKGLCLRGEVKKALK 160

Query: 250 LFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYC 309
              +++ L  + + +++  +I+ LCK G+   A  L+  + +R + PD   YN ++D  C
Sbjct: 161 FHDDVVALEFQLDRISYGTLINGLCKIGETKAAIQLMRNLEERSIKPDVVMYNIIIDSLC 220

Query: 310 LVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVI 369
               +  A  ++  M++K     VV+Y  LI G+C +  + EA++L  ++    +   V 
Sbjct: 221 KNKLVGEACNLYSEMNAKQIYPNVVTYTTLIYGFCIMGCLIEAVALLNEMKLKNINPDVY 280

Query: 370 TYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHML 429
           T++ L+  L + G+   A+ +   M    V+PD+ TYN L+DG    N V+ A  +F+ +
Sbjct: 281 TFSILIDALGKEGKMKAAKIVLAVMMKAYVKPDVVTYNSLVDGYFLVNEVKHAKYVFNSM 340

Query: 430 EMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKL 489
             +    G++ +  +IDGLCK   +D A  LF ++  K ++P  +T++ +I GLC+ G++
Sbjct: 341 AQSGVTPGVQSYTIMIDGLCKTKMVDEAISLFEEMKHKNVIPNTITFNSLIDGLCKSGRI 400

Query: 490 EKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFS 549
               D +  M       +V+T+++L+    +N    + + L  KM   E  + PD  T++
Sbjct: 401 AYVWDLVDKMRDRSQLADVITYSSLIDALCKNCHLDQAIALFKKMITQE--IQPDMYTYT 458

Query: 550 IVVDLLAK 557
           I++D L K
Sbjct: 459 ILIDGLCK 466



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 107/365 (29%), Positives = 188/365 (51%), Gaps = 2/365 (0%)

Query: 194 FSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIE 253
           F ++ I+ SL K      A  L   +  +GI   +V    LI+ FC  G       +   
Sbjct: 70  FQFNNILSSLVKMQRFPTAISLSKHLDFKGITSDLVTLNILINCFCHLGQITLSFSVLAT 129

Query: 254 MLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGR 313
           +L  G  P+++T   +I  LC  G++ +A    + ++      DR +Y +L++G C +G 
Sbjct: 130 ILKRGYHPDVITLTTLIKGLCLRGEVKKALKFHDDVVALEFQLDRISYGTLINGLCKIGE 189

Query: 314 IDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNT 373
              A ++  ++  +  K  VV YNI+I+  CK   V EA +LY ++ +  +   V+TY T
Sbjct: 190 TKAAIQLMRNLEERSIKPDVVMYNIIIDSLCKNKLVGEACNLYSEMNAKQIYPNVVTYTT 249

Query: 374 LLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNK 433
           L+ G    G    A  L +EMKL N+ PD+ T++ILID L K   ++ A  +  ++    
Sbjct: 250 LIYGFCIMGCLIEAVALLNEMKLKNINPDVYTFSILIDALGKEGKMKAAKIVLAVMMKAY 309

Query: 434 FEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKAN 493
            +  +  +N L+DG      + +A  +F+ + Q G+ P V +Y+IMI GLC+   +++A 
Sbjct: 310 VKPDVVTYNSLVDGYFLVNEVKHAKYVFNSMAQSGVTPGVQSYTIMIDGLCKTKMVDEAI 369

Query: 494 DFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
                M+     PN +TFN+L+ G  ++ + + V +L+ KM   +R+ + D  T+S ++D
Sbjct: 370 SLFEEMKHKNVIPNTITFNSLIDGLCKSGRIAYVWDLVDKMR--DRSQLADVITYSSLID 427

Query: 554 LLAKD 558
            L K+
Sbjct: 428 ALCKN 432



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 80/309 (25%), Positives = 154/309 (49%), Gaps = 13/309 (4%)

Query: 56  LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNI 115
           L EA      M     +P + +F++L  A+ K     A       ++   + PD +T N 
Sbjct: 260 LIEAVALLNEMKLKNINPDVYTFSILIDALGKEGKMKAAKIVLAVMMKAYVKPDVVTYNS 319

Query: 116 LINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLH 175
           L++       G  + N +K A ++F +M   GV P V +Y  +I+G C+T  +  A+ L 
Sbjct: 320 LVD-------GYFLVNEVKHAKYVFNSMAQSGVTPGVQSYTIMIDGLCKTKMVDEAISLF 372

Query: 176 KKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLI 235
           ++M    ++N +    N  +++ +ID LCK G +    +L  +M+ R     V+  ++LI
Sbjct: 373 EEM---KHKNVI---PNTITFNSLIDGLCKSGRIAYVWDLVDKMRDRSQLADVITYSSLI 426

Query: 236 HGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLN 295
              C   + ++   LF +M+    +P++ T+ ++ID LCKGG++  A  + + ++ +G +
Sbjct: 427 DALCKNCHLDQAIALFKKMITQEIQPDMYTYTILIDGLCKGGRLKIAQEVFQHLLIKGYH 486

Query: 296 PDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSL 355
            D  TY  ++ G+C  G  D A  +   M   GC    ++++I+I    +    ++A  L
Sbjct: 487 LDIRTYTVMISGFCKAGLFDEALALLSKMEDNGCIPNAITFDIIICALFEKDENDKAEKL 546

Query: 356 YRQIISNGV 364
            R++I+ G+
Sbjct: 547 LREMIARGL 555



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 66/246 (26%), Positives = 105/246 (42%), Gaps = 50/246 (20%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CK+ +++  EA   F  M H    P   +FN L   + K+     V     K+     L 
Sbjct: 360 CKTKMVD--EAISLFEEMKHKNVIPNTITFNSLIDGLCKSGRIAYVWDLVDKMRDRSQLA 417

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           D +T + LI+        LC    + +A  LFK MI   ++PD+ TY  LI+G C+ G L
Sbjct: 418 DVITYSSLID-------ALCKNCHLDQAIALFKKMITQEIQPDMYTYTILIDGLCKGGRL 470

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
            +A  + + ++   Y        +I +Y+++I   CK GL D+A  L  +M+        
Sbjct: 471 KIAQEVFQHLLIKGYH------LDIRTYTVMISGFCKAGLFDEALALLSKME-------- 516

Query: 229 VVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLEL 288
                                      D G  PN +TF+++I  L +  + ++A  LL  
Sbjct: 517 ---------------------------DNGCIPNAITFDIIICALFEKDENDKAEKLLRE 549

Query: 289 MIQRGL 294
           MI RGL
Sbjct: 550 MIARGL 555


>gi|242067349|ref|XP_002448951.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
 gi|241934794|gb|EES07939.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
          Length = 799

 Score =  312 bits (799), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 188/553 (33%), Positives = 277/553 (50%), Gaps = 40/553 (7%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CK+ + +  E    F  M      P   ++N L         +  V+    ++ + GL P
Sbjct: 245 CKAQLFDRAEG--VFQQMIDNGFKPNNYTYNCLIHGYLSIGKWKEVVQMLEEMSARGLKP 302

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           D  T   L+N        LC   R +EA + F +MI  G++P V TYG LI+G+   G L
Sbjct: 303 DCYTYGSLLNY-------LCKNGRCREARFFFDSMIRKGIKPKVSTYGILIHGYATKGAL 355

Query: 169 SVALRLHKKMV---------------SGDYENGLISKT--------------NIFSYSII 199
           S        MV               S   + G+I K               N+ +Y  +
Sbjct: 356 SEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGAL 415

Query: 200 IDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGP 259
           ID+LCK G VD A+  F +M   G+ P +VV  +L++G C    WE    L  EMLD G 
Sbjct: 416 IDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGI 475

Query: 260 RPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTARE 319
            PN + FN +I  LC  G++ E   L++LM   G+ PD F+Y  L+ GYCL GR D A +
Sbjct: 476 CPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLTGRTDEAEK 535

Query: 320 IFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLF 379
           +F  M S G   T V+YN L++GYC    +++A  L+R+++  GV   V+TYNT+L GLF
Sbjct: 536 VFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLF 595

Query: 380 QAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIE 439
           Q  +   A++L+  M     + D+ TYNI+++GLCK+NCV EA K+F  L     +  I 
Sbjct: 596 QTKRFSEAKELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNII 655

Query: 440 IFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYM 499
            F  +I  L K GR ++A +LF  +P  GLVP VVTY ++   L  +G LE+ +     M
Sbjct: 656 TFTIMIGALLKGGRKEDAMDLFAAIPANGLVPNVVTYRLVAENLIEEGSLEEFDSLFSAM 715

Query: 500 EKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDE 559
           EKNG APN    N L+   L     S+    L K+   ERN   + +T S+++ +   DE
Sbjct: 716 EKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKL--DERNFSVEASTTSLLMSIFTSDE 773

Query: 560 KYHECSAVSKSSY 572
             H   ++ +  +
Sbjct: 774 YQHHAKSLPEKYH 786



 Score =  241 bits (616), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 167/559 (29%), Positives = 262/559 (46%), Gaps = 40/559 (7%)

Query: 29  RQIAAVSSPETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKN 88
           R++ A  +   +L   + E  +S  + L++A   F  + H      + +FN L  AV++ 
Sbjct: 3   RRVGAAPARCLELERIIAERARSRSLGLDDALKLFDELLHHARPASVRAFNHLLTAVSRA 62

Query: 89  RHYDA---VISFYRKLV---SIGLLPDFLTLNILINCF---GNKE--------------- 124
           R   A    +S + ++V   S  + P+  T +ILI  F   G+ E               
Sbjct: 63  RCSSASELAVSHFNRMVRECSDKVAPNLCTYSILIGRFCRMGHLEHGFAAFGLILKTGWR 122

Query: 125 ----------RGLCVENRIKEA-TWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALR 173
                     +GLC   R+ EA   L + M   G  PD ++Y  L+ G C       AL 
Sbjct: 123 MDHIAINQLLKGLCHGKRVGEAMDVLLQRMPELGCMPDTVSYTILLKGLCNEKRAEEALE 182

Query: 174 LHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTT 233
           L   M     ++G     N+ SYSI+I+    EG VDK   LFLEM  RGI P VV  TT
Sbjct: 183 LLHMMAD---DHGRRCPPNVVSYSIVINGFFTEGQVDKPYNLFLEMIDRGIPPDVVTYTT 239

Query: 234 LIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRG 293
           +I G C A  ++   G+F +M+D G +PN  T+N +I      GK  E   +LE M  RG
Sbjct: 240 VIDGLCKAQLFDRAEGVFQQMIDNGFKPNNYTYNCLIHGYLSIGKWKEVVQMLEEMSARG 299

Query: 294 LNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAM 353
           L PD +TY SL++  C  GR   AR  F SM  KG K  V +Y ILI+GY     + E  
Sbjct: 300 LKPDCYTYGSLLNYLCKNGRCREARFFFDSMIRKGIKPKVSTYGILIHGYATKGALSEMH 359

Query: 354 SLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGL 413
           S    ++ NG+      +N   S   + G    A  +F++M+ + + P++  Y  LID L
Sbjct: 360 SFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDAL 419

Query: 414 CKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTV 473
           CK   V +A   F+ +        I +FN L+ GLC   + + A EL +++  +G+ P  
Sbjct: 420 CKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNA 479

Query: 474 VTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHK 533
           V ++ +I  LC  G++ +    +  ME  G  P+  ++  L+ G+    +T +  ++   
Sbjct: 480 VFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLTGRTDEAEKVFDG 539

Query: 534 MAEPERNLVPDDTTFSIVV 552
           M      L P + T++ ++
Sbjct: 540 MVSI--GLSPTEVTYNTLL 556



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 101/338 (29%), Positives = 167/338 (49%), Gaps = 6/338 (1%)

Query: 224 INPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEA- 282
           + P +   + LI  FC  G+ E     F  +L  G R + +  N ++  LC G ++ EA 
Sbjct: 86  VAPNLCTYSILIGRFCRMGHLEHGFAAFGLILKTGWRMDHIAINQLLKGLCHGKRVGEAM 145

Query: 283 NGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSM---HSKGCKHTVVSYNIL 339
           + LL+ M + G  PD  +Y  L+ G C   R + A E+   M   H + C   VVSY+I+
Sbjct: 146 DVLLQRMPELGCMPDTVSYTILLKGLCNEKRAEEALELLHMMADDHGRRCPPNVVSYSIV 205

Query: 340 INGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNV 399
           ING+     V++  +L+ ++I  G+   V+TY T++ GL +A     A+ +F +M     
Sbjct: 206 INGFFTEGQVDKPYNLFLEMIDRGIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGF 265

Query: 400 EPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWE 459
           +P+  TYN LI G       +E V++   +     +     +  L++ LCK GR   A  
Sbjct: 266 KPNNYTYNCLIHGYLSIGKWKEVVQMLEEMSARGLKPDCYTYGSLLNYLCKNGRCREARF 325

Query: 460 LFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFL 519
            F  + +KG+ P V TY I+IHG   KG L + + FL  M +NG +P+   FN     + 
Sbjct: 326 FFDSMIRKGIKPKVSTYGILIHGYATKGALSEMHSFLDLMVENGLSPDHHIFNIFFSAYA 385

Query: 520 QNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAK 557
           +     K +++ +KM   +  L P+   +  ++D L K
Sbjct: 386 KCGMIDKAMDIFNKMR--QHGLSPNVVNYGALIDALCK 421



 Score = 95.1 bits (235), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 61/233 (26%), Positives = 117/233 (50%), Gaps = 12/233 (5%)

Query: 345 KILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQA---GQAGYAQKLFDEMKLY---N 398
           + L +++A+ L+ +++ +    +V  +N LL+ + +A     +  A   F+ M       
Sbjct: 26  RSLGLDDALKLFDELLHHARPASVRAFNHLLTAVSRARCSSASELAVSHFNRMVRECSDK 85

Query: 399 VEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAW 458
           V P+L TY+ILI   C+   ++     F ++    +       N L+ GLC   R+  A 
Sbjct: 86  VAPNLCTYSILIGRFCRMGHLEHGFAAFGLILKTGWRMDHIAINQLLKGLCHGKRVGEAM 145

Query: 459 E-LFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNG---CAPNVVTFNTL 514
           + L  ++P+ G +P  V+Y+I++ GLC + + E+A + L  M  +    C PNVV+++ +
Sbjct: 146 DVLLQRMPELGCMPDTVSYTILLKGLCNEKRAEEALELLHMMADDHGRRCPPNVVSYSIV 205

Query: 515 MHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAV 567
           ++GF    +  K   L  +M   +R + PD  T++ V+D L K + +     V
Sbjct: 206 INGFFTEGQVDKPYNLFLEMI--DRGIPPDVVTYTTVIDGLCKAQLFDRAEGV 256


>gi|357499033|ref|XP_003619805.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494820|gb|AES76023.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 548

 Score =  312 bits (799), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 169/497 (34%), Positives = 269/497 (54%), Gaps = 34/497 (6%)

Query: 66  MTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKE- 124
           + H  P+PP   FN +  ++ K +H+   +S ++++   G+  DF T NILINCF     
Sbjct: 52  LLHKNPTPPTFQFNKILSSLVKAKHHSTALSLHQQMELNGIESDFFTFNILINCFSQLGL 111

Query: 125 ---------------------------RGLCVENRIKEATWLFKNMIAFGVRPDVITYGT 157
                                      +GLC++  I +A      ++A G   D ++YGT
Sbjct: 112 NSLSFSIFAKILKKGYHPTAITFNTLIKGLCLKGHIHQALHFHDKVVAQGFHLDQVSYGT 171

Query: 158 LINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFL 217
           LING C+ G ++ AL+L K++      +G + + N   Y++IID++CK  LV+ A +L+ 
Sbjct: 172 LINGLCKVGRITAALQLLKRV------DGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYS 225

Query: 218 EMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGG 277
           +M  + I P V     LI GF           LF +M      PN+ TFN+++D  CK G
Sbjct: 226 QMVAKRICPDVFTYNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKEG 285

Query: 278 KINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYN 337
           K+N+A  +L +M++  + PD  TYNSLMDGYC + +++ A++IF SM S G    V  Y 
Sbjct: 286 KVNDAKVVLAIMMKDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQIYT 345

Query: 338 ILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLY 397
            ++NG+CKI  V+EA++L+ ++    +   V+TY++L+ GL + G+  YA KL DEM   
Sbjct: 346 TMVNGFCKIKMVDEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDR 405

Query: 398 NVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNA 457
              P++ TY+ ++D LCKN+ V +A+ L   L+       +  +  LI GLC++GRL++A
Sbjct: 406 GQPPNIVTYSSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTILIKGLCQSGRLEDA 465

Query: 458 WELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHG 517
             +F  L  KG    V  Y++MI G C KG  +KA   L  ME NGC PN  T+  ++  
Sbjct: 466 QNVFEDLLVKGYNLDVYAYTVMIQGFCDKGFFDKALALLSKMEDNGCIPNAKTYELVILS 525

Query: 518 FLQNNKTSKVVELLHKM 534
             + ++     +LL +M
Sbjct: 526 LFEKDENDTAEKLLREM 542



 Score =  174 bits (442), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 103/353 (29%), Positives = 181/353 (51%), Gaps = 15/353 (4%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
           N  +   CK+ ++N  +A   +  M   +  P + ++N L    +     +  I  + K+
Sbjct: 205 NMIIDNMCKAKLVN--DAFDLYSQMVAKRICPDVFTYNALISGFSAVSKLNYAIDLFNKM 262

Query: 102 VSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLING 161
               + P+  T NIL++       G C E ++ +A  +   M+   ++PDV+TY +L++G
Sbjct: 263 KKENINPNVYTFNILVD-------GFCKEGKVNDAKVVLAIMMKDDIKPDVVTYNSLMDG 315

Query: 162 FCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKG 221
           +C    ++ A  +   M SG    G+I+   I  Y+ +++  CK  +VD+A  LF EM+ 
Sbjct: 316 YCSINKVNKAKDIFDSMASG----GVIANVQI--YTTMVNGFCKIKMVDEAINLFEEMRC 369

Query: 222 RGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINE 281
           R I P VV  ++LI G C  G       L  EM D G  PN++T++ ++D LCK   +++
Sbjct: 370 RKIIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRGQPPNIVTYSSILDALCKNHHVDK 429

Query: 282 ANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILIN 341
           A  LL  +  +G+ PD +TY  L+ G C  GR++ A+ +F  +  KG    V +Y ++I 
Sbjct: 430 AIALLTNLKDQGIRPDMYTYTILIKGLCQSGRLEDAQNVFEDLLVKGYNLDVYAYTVMIQ 489

Query: 342 GYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEM 394
           G+C     ++A++L  ++  NG      TY  ++  LF+  +   A+KL  EM
Sbjct: 490 GFCDKGFFDKALALLSKMEDNGCIPNAKTYELVILSLFEKDENDTAEKLLREM 542



 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 129/488 (26%), Positives = 220/488 (45%), Gaps = 45/488 (9%)

Query: 21  LSSLFKSPRQIAAVS-SPETQLNEFLHE--------NCKSGIINLNEARY-FFGYMTHMQ 70
           LSSL K+     A+S   + +LN    +        NC S +  LN   +  F  +    
Sbjct: 68  LSSLVKAKHHSTALSLHQQMELNGIESDFFTFNILINCFSQL-GLNSLSFSIFAKILKKG 126

Query: 71  PSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKER----- 125
             P   +FN L   +    H    + F+ K+V+ G   D ++   LIN      R     
Sbjct: 127 YHPTAITFNTLIKGLCLKGHIHQALHFHDKVVAQGFHLDQVSYGTLINGLCKVGRITAAL 186

Query: 126 -----------------------GLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGF 162
                                   +C    + +A  L+  M+A  + PDV TY  LI+GF
Sbjct: 187 QLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRICPDVFTYNALISGF 246

Query: 163 CRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGR 222
                L+ A+ L  KM   +         N+++++I++D  CKEG V+ AK +   M   
Sbjct: 247 SAVSKLNYAIDLFNKMKKENIN------PNVYTFNILVDGFCKEGKVNDAKVVLAIMMKD 300

Query: 223 GINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEA 282
            I P VV   +L+ G+C      +   +F  M   G   N+  +  M++  CK   ++EA
Sbjct: 301 DIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQIYTTMVNGFCKIKMVDEA 360

Query: 283 NGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILING 342
             L E M  R + P+  TY+SL+DG C +GRI  A ++   MH +G    +V+Y+ +++ 
Sbjct: 361 INLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRGQPPNIVTYSSILDA 420

Query: 343 YCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPD 402
            CK  +V++A++L   +   G+R  + TY  L+ GL Q+G+   AQ +F+++ +     D
Sbjct: 421 LCKNHHVDKAIALLTNLKDQGIRPDMYTYTILIKGLCQSGRLEDAQNVFEDLLVKGYNLD 480

Query: 403 LSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFH 462
           +  Y ++I G C      +A+ L   +E N      + +  +I  L +    D A +L  
Sbjct: 481 VYAYTVMIQGFCDKGFFDKALALLSKMEDNGCIPNAKTYELVILSLFEKDENDTAEKLLR 540

Query: 463 KLPQKGLV 470
           ++  +GL+
Sbjct: 541 EMIVRGLL 548



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 78/280 (27%), Positives = 137/280 (48%), Gaps = 6/280 (2%)

Query: 278 KINEANGLL----ELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTV 333
           K +E N L+     L++ +   P  F +N ++          TA  +   M   G +   
Sbjct: 37  KQDEENNLISSFNHLLLHKNPTPPTFQFNKILSSLVKAKHHSTALSLHQQMELNGIESDF 96

Query: 334 VSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDE 393
            ++NILIN + ++     + S++ +I+  G   T IT+NTL+ GL   G    A    D+
Sbjct: 97  FTFNILINCFSQLGLNSLSFSIFAKILKKGYHPTAITFNTLIKGLCLKGHIHQALHFHDK 156

Query: 394 MKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGR 453
           +       D  +Y  LI+GLCK   +  A++L   ++    +    ++N +ID +CKA  
Sbjct: 157 VVAQGFHLDQVSYGTLINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKL 216

Query: 454 LDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNT 513
           +++A++L+ ++  K + P V TY+ +I G     KL  A D    M+K    PNV TFN 
Sbjct: 217 VNDAFDLYSQMVAKRICPDVFTYNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNI 276

Query: 514 LMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
           L+ GF +  K +    +L  M + +  + PD  T++ ++D
Sbjct: 277 LVDGFCKEGKVNDAKVVLAIMMKDD--IKPDVVTYNSLMD 314



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 64/233 (27%), Positives = 115/233 (49%), Gaps = 2/233 (0%)

Query: 335 SYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEM 394
            +N +++   K  +   A+SL++Q+  NG+     T+N L++   Q G    +  +F ++
Sbjct: 63  QFNKILSSLVKAKHHSTALSLHQQMELNGIESDFFTFNILINCFSQLGLNSLSFSIFAKI 122

Query: 395 KLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRL 454
                 P   T+N LI GLC    + +A+     +    F      +  LI+GLCK GR+
Sbjct: 123 LKKGYHPTAITFNTLIKGLCLKGHIHQALHFHDKVVAQGFHLDQVSYGTLINGLCKVGRI 182

Query: 455 DNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTL 514
             A +L  ++  K + P  V Y+++I  +C+   +  A D    M      P+V T+N L
Sbjct: 183 TAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRICPDVFTYNAL 242

Query: 515 MHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAV 567
           + GF   +K +  ++L +KM +   N+ P+  TF+I+VD   K+ K ++   V
Sbjct: 243 ISGFSAVSKLNYAIDLFNKMKK--ENINPNVYTFNILVDGFCKEGKVNDAKVV 293


>gi|297830278|ref|XP_002883021.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297328861|gb|EFH59280.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 504

 Score =  311 bits (797), Expect = 6e-82,   Method: Compositional matrix adjust.
 Identities = 160/460 (34%), Positives = 260/460 (56%), Gaps = 15/460 (3%)

Query: 50  KSGIINL--NEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLL 107
           ++G+ NL  NEA   F  M H +P P I  F  L   +AK + +D VIS + ++  +G+ 
Sbjct: 55  RNGLHNLQFNEALDLFTRMVHSRPLPSIVDFTRLLSVIAKMKRFDVVISLFEQMQILGIS 114

Query: 108 PDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGN 167
           P   T NI++NC       +C  ++   A+     M+  G  PD++T+ +L++GFC    
Sbjct: 115 PVLYTCNIVMNC-------VCRSSQPCRASCFLGKMMKLGFEPDLVTFTSLLHGFCHWNR 167

Query: 168 LSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPA 227
           +  AL L  ++V      G+  + N+ +Y+ +I  LCK   ++ A E+F +M   GI P 
Sbjct: 168 IEDALALFDQIV------GMGFRPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPN 221

Query: 228 VVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLE 287
           VV   +L+ G C  G W +   L  +M+  G +PN++TF  +ID   K GKI EA  L +
Sbjct: 222 VVTYNSLVSGLCEIGRWSDAAWLLRDMMKRGIQPNVITFTALIDAFVKVGKIMEAKELYK 281

Query: 288 LMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKIL 347
           +MIQ  + PD FTY +L++G C  GR+D AR++F  M S G     V+Y  LI+G+CK  
Sbjct: 282 VMIQMSVYPDVFTYTALINGLCTYGRLDEARQMFYLMESNGYYPNEVTYTTLIHGFCKSK 341

Query: 348 NVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYN 407
            VE+   ++ ++   G+    ITY  L+ G    G+   AQ++F++M      PD+ TYN
Sbjct: 342 RVEDGTKIFYEMSQKGLVANTITYTVLIQGYCLVGRPDVAQEVFNQMGSRRAPPDIRTYN 401

Query: 408 ILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQK 467
           +L+DGLC N  V++A+ +F  +   + +  I  +  +I G+CK G++++A++LF  L  K
Sbjct: 402 VLLDGLCYNGYVEKALMIFKYMRKREMDINIVTYTIIIQGMCKVGKVEDAFDLFCSLFSK 461

Query: 468 GLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPN 507
           G+ P V+TY+ MI G CR+G + +A+     M+++G  PN
Sbjct: 462 GMKPNVITYTTMISGFCRRGFIHEADALFKKMKEDGFLPN 501



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 120/438 (27%), Positives = 214/438 (48%), Gaps = 8/438 (1%)

Query: 132 RIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKT 191
           +  EA  LF  M+     P ++ +  L++   +     V + L ++M        L    
Sbjct: 62  QFNEALDLFTRMVHSRPLPSIVDFTRLLSVIAKMKRFDVVISLFEQM------QILGISP 115

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
            +++ +I+++ +C+     +A     +M   G  P +V  T+L+HGFC     E+   LF
Sbjct: 116 VLYTCNIVMNCVCRSSQPCRASCFLGKMMKLGFEPDLVTFTSLLHGFCHWNRIEDALALF 175

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
            +++ +G RPN++T+  +I CLCK   +N A  +   M   G+ P+  TYNSL+ G C +
Sbjct: 176 DQIVGMGFRPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPNVVTYNSLVSGLCEI 235

Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
           GR   A  +   M  +G +  V+++  LI+ + K+  + EA  LY+ +I   V   V TY
Sbjct: 236 GRWSDAAWLLRDMMKRGIQPNVITFTALIDAFVKVGKIMEAKELYKVMIQMSVYPDVFTY 295

Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
             L++GL   G+   A+++F  M+     P+  TY  LI G CK+  V++  K+F+ +  
Sbjct: 296 TALINGLCTYGRLDEARQMFYLMESNGYYPNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQ 355

Query: 432 NKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEK 491
                    +  LI G C  GR D A E+F+++  +   P + TY++++ GLC  G +EK
Sbjct: 356 KGLVANTITYTVLIQGYCLVGRPDVAQEVFNQMGSRRAPPDIRTYNVLLDGLCYNGYVEK 415

Query: 492 ANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIV 551
           A     YM K     N+VT+  ++ G  +  K     +L   +    + + P+  T++ +
Sbjct: 416 ALMIFKYMRKREMDINIVTYTIIIQGMCKVGKVEDAFDLFCSLF--SKGMKPNVITYTTM 473

Query: 552 VDLLAKDEKYHECSAVSK 569
           +    +    HE  A+ K
Sbjct: 474 ISGFCRRGFIHEADALFK 491



 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 66/240 (27%), Positives = 120/240 (50%), Gaps = 2/240 (0%)

Query: 347 LNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTY 406
           L   EA+ L+ +++ +    +++ +  LLS + +  +      LF++M++  + P L T 
Sbjct: 61  LQFNEALDLFTRMVHSRPLPSIVDFTRLLSVIAKMKRFDVVISLFEQMQILGISPVLYTC 120

Query: 407 NILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQ 466
           NI+++ +C+++    A      +    FE  +  F  L+ G C   R+++A  LF ++  
Sbjct: 121 NIVMNCVCRSSQPCRASCFLGKMMKLGFEPDLVTFTSLLHGFCHWNRIEDALALFDQIVG 180

Query: 467 KGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSK 526
            G  P VVTY+ +IH LC+   L  A +    M  NG  PNVVT+N+L+ G  +  + S 
Sbjct: 181 MGFRPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWSD 240

Query: 527 VVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKSSYRACLYVTIFQPSSL 586
              LL  M   +R + P+  TF+ ++D   K  K  E   + K   +  +Y  +F  ++L
Sbjct: 241 AAWLLRDMM--KRGIQPNVITFTALIDAFVKVGKIMEAKELYKVMIQMSVYPDVFTYTAL 298


>gi|356566887|ref|XP_003551657.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Glycine max]
          Length = 525

 Score =  310 bits (793), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 188/496 (37%), Positives = 269/496 (54%), Gaps = 36/496 (7%)

Query: 55  NLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGL-LPDFLTL 113
             ++A   F  M H+ P P I S N L  ++ K +HY  V+S    L S G   P  +TL
Sbjct: 35  TFDDAVSTFHRMLHLHPPPSIVSLNKLLSSIMKTKHYPTVVSLCSHLDSKGTPKPSLVTL 94

Query: 114 NILINC---------------------FGNKE-------RGLCVENRIKEATWLFKNMIA 145
           +I IN                      FG          +GLC++ R  EA  L+ + ++
Sbjct: 95  SIFINSLTHLGQMGLAFSVMAKIVKRGFGVDPFTLTTLMKGLCLKGRTFEALNLYDHAVS 154

Query: 146 FGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCK 205
            G   D + YGTLING C+ G    A+ L +KM  G        + N+  Y++++D LCK
Sbjct: 155 KGFSFDEVCYGTLINGLCKMGKTRDAIELLRKMEKGGV------RPNLIMYNMVVDGLCK 208

Query: 206 EGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEM-LDLGPRPNLL 264
           EGLV +A  L  EM G+GI   V    +LIHGFC AG ++    L  EM +    RP++ 
Sbjct: 209 EGLVTEACGLCSEMVGKGICIDVFTYNSLIHGFCGAGQFQGAVRLLNEMVMKEDVRPDVY 268

Query: 265 TFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSM 324
           TFN+++D LCK G + EA  +  LMI+RGL PD  + N+LM+G+CL G +  A+E+F  M
Sbjct: 269 TFNILVDALCKLGMVAEARNVFGLMIKRGLEPDVVSCNALMNGWCLRGCMSEAKEVFDRM 328

Query: 325 HSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQA 384
             +G    V+SY+ LINGYCK+  V+EA+ L  ++    +    +TYN LL GL ++G+ 
Sbjct: 329 VERGKLPNVISYSTLINGYCKVKMVDEALRLLTEMHQRNLVPDTVTYNCLLDGLSKSGRV 388

Query: 385 GYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCL 444
            Y   L + M+     PDL TYN+L+D   K  C+ +A+ LF  +        I  +N L
Sbjct: 389 LYEWDLVEAMRASGQAPDLITYNVLLDDYLKRECLDKALALFQHIVDTGISPNIRTYNIL 448

Query: 445 IDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGC 504
           IDGLCK GR+  A E+F  L  KG  P + TY+IMI+GL R+G L++A   LL M  +G 
Sbjct: 449 IDGLCKGGRMKAAKEIFQLLSVKGCRPNIRTYNIMINGLRREGLLDEAEALLLEMVDDGF 508

Query: 505 APNVVTFNTLMHGFLQ 520
            PN VTF+ L+   L+
Sbjct: 509 PPNAVTFDPLVRALLE 524



 Score = 39.3 bits (90), Expect = 6.4,   Method: Compositional matrix adjust.
 Identities = 32/122 (26%), Positives = 53/122 (43%), Gaps = 13/122 (10%)

Query: 41  LNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRK 100
           L+++L   C      L++A   F ++     SP I ++N+L   + K     A    ++ 
Sbjct: 414 LDDYLKREC------LDKALALFQHIVDTGISPNIRTYNILIDGLCKGGRMKAAKEIFQL 467

Query: 101 LVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLIN 160
           L   G  P+  T NI+IN       GL  E  + EA  L   M+  G  P+ +T+  L+ 
Sbjct: 468 LSVKGCRPNIRTYNIMIN-------GLRREGLLDEAEALLLEMVDDGFPPNAVTFDPLVR 520

Query: 161 GF 162
             
Sbjct: 521 AL 522


>gi|91806021|gb|ABE65739.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 450

 Score =  309 bits (792), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 176/456 (38%), Positives = 252/456 (55%), Gaps = 19/456 (4%)

Query: 101 LVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLIN 160
           +V IGL P  +T N LIN       GLC+E R+ EA  L   M+  G+  DV+TYGT++N
Sbjct: 1   MVEIGLTPVVITFNTLIN-------GLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVN 53

Query: 161 GFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMK 220
           G C+ G+   AL L  KM     E   I K ++  YS IID LCK+G    A+ LF EM 
Sbjct: 54  GMCKMGDTKSALNLLSKM-----EETHI-KPDVVIYSAIIDRLCKDGHHSDAQYLFSEML 107

Query: 221 GRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKIN 280
            +GI P V     +I GFC  G W +   L  +M++    P++LTFN +I    K GK+ 
Sbjct: 108 EKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLF 167

Query: 281 EANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILI 340
           EA  L + M+ R + PD  TYNS++ G+C   R D A+ +F  M S      VV++N +I
Sbjct: 168 EAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASP----DVVTFNTII 223

Query: 341 NGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVE 400
           + YC+   V+E M L R+I   G+     TYNTL+ G  +      AQ LF EM  + V 
Sbjct: 224 DVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVC 283

Query: 401 PDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWEL 460
           PD  T NIL+ G C+N  ++EA++LF +++M+K +     +N +I G+CK  ++D AW+L
Sbjct: 284 PDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDL 343

Query: 461 FHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQ 520
           F  LP  G+ P V TY++MI G C K  +  AN     M+ NG  P+  T+NTL+ G L+
Sbjct: 344 FCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLK 403

Query: 521 NNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLA 556
             +  K +EL+ +M         D  T  +V DL+ 
Sbjct: 404 AGEIDKSIELISEMR--SNGFSGDAFTIKMVADLIT 437



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 132/445 (29%), Positives = 221/445 (49%), Gaps = 17/445 (3%)

Query: 66  MTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKER 125
           M  +  +P + +FN L   +          +   K+V  GL  D +T   ++N       
Sbjct: 1   MVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVN------- 53

Query: 126 GLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYEN 185
           G+C     K A  L   M    ++PDV+ Y  +I+  C+ G+ S A  L  +M+    E 
Sbjct: 54  GMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEML----EK 109

Query: 186 GLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWE 245
           G+    N+F+Y+ +ID  C  G    A+ L  +M  R INP V+    LI      G   
Sbjct: 110 GI--APNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLF 167

Query: 246 EVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLM 305
           E   L  EML     P+ +T+N MI   CK  + ++A  + +LM     +PD  T+N+++
Sbjct: 168 EAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA----SPDVVTFNTII 223

Query: 306 DGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVR 365
           D YC   R+D   ++   +  +G      +YN LI+G+C++ N+  A  L++++IS+GV 
Sbjct: 224 DVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVC 283

Query: 366 QTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKL 425
              IT N LL G  +  +   A +LF+ +++  ++ D   YNI+I G+CK + V EA  L
Sbjct: 284 PDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDL 343

Query: 426 FHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCR 485
           F  L ++  E  ++ +N +I G C    + +A  LFHK+   G  P   TY+ +I G  +
Sbjct: 344 FCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLK 403

Query: 486 KGKLEKANDFLLYMEKNGCAPNVVT 510
            G+++K+ + +  M  NG + +  T
Sbjct: 404 AGEIDKSIELISEMRSNGFSGDAFT 428



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 98/363 (26%), Positives = 172/363 (47%), Gaps = 19/363 (5%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CK G  + ++A+Y F  M     +P + ++N +         +       R ++   + P
Sbjct: 91  CKDG--HHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINP 148

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           D LT N LI+           E ++ EA  L   M+   + PD +TY ++I GFC+    
Sbjct: 149 DVLTFNALIS-------ASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCK---- 197

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
                 H +     +   L++  ++ +++ IID  C+   VD+  +L  E+  RG+    
Sbjct: 198 ------HNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANT 251

Query: 229 VVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLEL 288
               TLIHGFC   N      LF EM+  G  P+ +T N+++   C+  K+ EA  L E+
Sbjct: 252 TTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEV 311

Query: 289 MIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILN 348
           +    ++ D   YN ++ G C   ++D A ++F S+   G +  V +YN++I+G+C    
Sbjct: 312 IQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSA 371

Query: 349 VEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNI 408
           + +A  L+ ++  NG      TYNTL+ G  +AG+   + +L  EM+      D  T  +
Sbjct: 372 ISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKM 431

Query: 409 LID 411
           + D
Sbjct: 432 VAD 434



 Score =  115 bits (289), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 92/320 (28%), Positives = 148/320 (46%), Gaps = 29/320 (9%)

Query: 11  FSSETVSKVKLSSLFKSPR----QIAAVSSPET-QLNEFLHENCKSGIINLNEARYFFGY 65
           F++   + VK   LF++ +     +     P+T   N  ++  CK      ++A++ F  
Sbjct: 153 FNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHN--RFDDAKHMFDL 210

Query: 66  MTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKER 125
           M     SP + +FN +     + +  D  +   R++   GL+ +  T N LI+       
Sbjct: 211 MA----SPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIH------- 259

Query: 126 GLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYEN 185
           G C  + +  A  LF+ MI+ GV PD IT   L+ GFC    L  AL L        +E 
Sbjct: 260 GFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALEL--------FEV 311

Query: 186 GLISKTNI--FSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGN 243
             +SK ++   +Y+III  +CK   VD+A +LF  +   G+ P V     +I GFC    
Sbjct: 312 IQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSA 371

Query: 244 WEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNS 303
             + N LF +M D G  P+  T+N +I    K G+I+++  L+  M   G + D FT   
Sbjct: 372 ISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKM 431

Query: 304 LMDGYCLVGRIDTAREIFLS 323
           + D     GR+D +    LS
Sbjct: 432 VAD-LITDGRLDKSFSDMLS 450



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 54/177 (30%), Positives = 83/177 (46%), Gaps = 2/177 (1%)

Query: 401 PDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWEL 460
           P + T+N LI+GLC    V EA  L + +        +  +  +++G+CK G   +A  L
Sbjct: 8   PVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNL 67

Query: 461 FHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQ 520
             K+ +  + P VV YS +I  LC+ G    A      M + G APNV T+N ++ GF  
Sbjct: 68  LSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCS 127

Query: 521 NNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKSSYRACLY 577
             + S    LL  M E E N  PD  TF+ ++    K+ K  E   +       C++
Sbjct: 128 FGRWSDAQRLLRDMIEREIN--PDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIF 182


>gi|297840249|ref|XP_002888006.1| binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297333847|gb|EFH64265.1| binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 485

 Score =  309 bits (792), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 171/453 (37%), Positives = 257/453 (56%), Gaps = 16/453 (3%)

Query: 54  INLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTL 113
           +NL+EA   F  M   +P P I  F+ L   +AK+++YD VIS +  +   G+  D  T 
Sbjct: 48  MNLDEAIDLFCNMIQSRPLPSIVEFSKLLSNIAKSKNYDLVISLFHNMEICGIGHDLYTY 107

Query: 114 NILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALR 173
           NI+INC       LC  +R   A  +   M+ FG  PDV+T  +LINGFC+   +  A+ 
Sbjct: 108 NIVINC-------LCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFGAVD 160

Query: 174 LHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTT 233
           L  KM        +  K ++  Y+ IID  CK GLV+ A  LF  M+  G+    V   +
Sbjct: 161 LVSKM------EEMRCKLDVVIYNTIIDGFCKTGLVNNALVLFGRMERDGVRADTVTYNS 214

Query: 234 LIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRG 293
           L+ G CC+G   +   L  +M+     PN++TF  +I+   + GK  EA    E MI+R 
Sbjct: 215 LVTGLCCSGRRSDAARLMRDMVMRDIVPNVITFTALINAFVREGKFLEAKKFYEEMIRRC 274

Query: 294 LNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAM 353
           ++PD FTYNS++ G C+ G++D A++I   M +KGC   VV+YN LING+CK   V+E  
Sbjct: 275 IDPDVFTYNSMIHGLCMHGQVDEAKQILDLMVTKGCFPDVVTYNTLINGFCKTKRVDEGT 334

Query: 354 SLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGL 413
            L R++   G+    +T+NT++ G FQAG+   AQ++F  M      P++ TY+IL+ GL
Sbjct: 335 KLVREMSQRGLVVDTVTFNTIIQGYFQAGRPDAAQEIFSRM---GSRPNIRTYSILLYGL 391

Query: 414 CKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTV 473
           C N  V++A+ LF  ++ ++ E  I  +N +I G+C  G +++AW+LF  L  KGL P V
Sbjct: 392 CYNWRVEKALVLFESMQKSEMELDITTYNIVIHGMCMIGNVEDAWDLFCSLSFKGLEPDV 451

Query: 474 VTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAP 506
           VTY+ MI G CRK   +KA+     M+++G  P
Sbjct: 452 VTYTTMISGFCRKRLWDKADFLYRKMQEDGLLP 484



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 123/437 (28%), Positives = 197/437 (45%), Gaps = 40/437 (9%)

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRL-HKKMVSGDYENGLISKT 191
           + EA  LF NMI     P ++ +  L++   ++ N  + + L H   + G          
Sbjct: 50  LDEAIDLFCNMIQSRPLPSIVEFSKLLSNIAKSKNYDLVISLFHNMEICG-------IGH 102

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
           ++++Y+I+I+ LC+      A  +  +M   G  P VV  ++LI+GFC          L 
Sbjct: 103 DLYTYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFGAVDLV 162

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
            +M ++  + +++ +N +ID  CK G +N A  L   M + G+  D  TYNSL+ G C  
Sbjct: 163 SKMEEMRCKLDVVIYNTIIDGFCKTGLVNNALVLFGRMERDGVRADTVTYNSLVTGLCCS 222

Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
           GR   A  +   M  +     V+++  LIN + +     EA   Y ++I   +   V TY
Sbjct: 223 GRRSDAARLMRDMVMRDIVPNVITFTALINAFVREGKFLEAKKFYEEMIRRCIDPDVFTY 282

Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
           N+++ GL   GQ   A+++ D M      PD+ TYN LI+G CK   V E  KL   +  
Sbjct: 283 NSMIHGLCMHGQVDEAKQILDLMVTKGCFPDVVTYNTLINGFCKTKRVDEGTKLVREMSQ 342

Query: 432 NKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPT------------------- 472
                    FN +I G  +AGR D A E+F ++  +  + T                   
Sbjct: 343 RGLVVDTVTFNTIIQGYFQAGRPDAAQEIFSRMGSRPNIRTYSILLYGLCYNWRVEKALV 402

Query: 473 -------------VVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFL 519
                        + TY+I+IHG+C  G +E A D    +   G  P+VVT+ T++ GF 
Sbjct: 403 LFESMQKSEMELDITTYNIVIHGMCMIGNVEDAWDLFCSLSFKGLEPDVVTYTTMISGFC 462

Query: 520 QNNKTSKVVELLHKMAE 536
           +     K   L  KM E
Sbjct: 463 RKRLWDKADFLYRKMQE 479



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 100/344 (29%), Positives = 184/344 (53%), Gaps = 5/344 (1%)

Query: 209 VDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNV 268
           +D+A +LF  M      P++V  + L+     + N++ V  LF  M   G   +L T+N+
Sbjct: 50  LDEAIDLFCNMIQSRPLPSIVEFSKLLSNIAKSKNYDLVISLFHNMEICGIGHDLYTYNI 109

Query: 269 MIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKG 328
           +I+CLC+  +   A  ++  M++ G  PD  T +SL++G+C   R+  A ++   M    
Sbjct: 110 VINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFGAVDLVSKMEEMR 169

Query: 329 CKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQ 388
           CK  VV YN +I+G+CK   V  A+ L+ ++  +GVR   +TYN+L++GL  +G+   A 
Sbjct: 170 CKLDVVIYNTIIDGFCKTGLVNNALVLFGRMERDGVRADTVTYNSLVTGLCCSGRRSDAA 229

Query: 389 KLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGL 448
           +L  +M + ++ P++ T+  LI+   +     EA K +  +     +  +  +N +I GL
Sbjct: 230 RLMRDMVMRDIVPNVITFTALINAFVREGKFLEAKKFYEEMIRRCIDPDVFTYNSMIHGL 289

Query: 449 CKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNV 508
           C  G++D A ++   +  KG  P VVTY+ +I+G C+  ++++    +  M + G   + 
Sbjct: 290 CMHGQVDEAKQILDLMVTKGCFPDVVTYNTLINGFCKTKRVDEGTKLVREMSQRGLVVDT 349

Query: 509 VTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVV 552
           VTFNT++ G+ Q  +     E+  +M        P+  T+SI++
Sbjct: 350 VTFNTIIQGYFQAGRPDAAQEIFSRMGSR-----PNIRTYSILL 388



 Score =  149 bits (375), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 91/310 (29%), Positives = 157/310 (50%), Gaps = 2/310 (0%)

Query: 243 NWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYN 302
           N +E   LF  M+   P P+++ F+ ++  + K    +    L   M   G+  D +TYN
Sbjct: 49  NLDEAIDLFCNMIQSRPLPSIVEFSKLLSNIAKSKNYDLVISLFHNMEICGIGHDLYTYN 108

Query: 303 SLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISN 362
            +++  C   R   A  +   M   G +  VV+ + LING+C+   V  A+ L  ++   
Sbjct: 109 IVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFGAVDLVSKMEEM 168

Query: 363 GVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEA 422
             +  V+ YNT++ G  + G    A  LF  M+   V  D  TYN L+ GLC +    +A
Sbjct: 169 RCKLDVVIYNTIIDGFCKTGLVNNALVLFGRMERDGVRADTVTYNSLVTGLCCSGRRSDA 228

Query: 423 VKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHG 482
            +L   + M      +  F  LI+   + G+   A + + ++ ++ + P V TY+ MIHG
Sbjct: 229 ARLMRDMVMRDIVPNVITFTALINAFVREGKFLEAKKFYEEMIRRCIDPDVFTYNSMIHG 288

Query: 483 LCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLV 542
           LC  G++++A   L  M   GC P+VVT+NTL++GF +  +  +  +L+ +M+  +R LV
Sbjct: 289 LCMHGQVDEAKQILDLMVTKGCFPDVVTYNTLINGFCKTKRVDEGTKLVREMS--QRGLV 346

Query: 543 PDDTTFSIVV 552
            D  TF+ ++
Sbjct: 347 VDTVTFNTII 356



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 63/242 (26%), Positives = 126/242 (52%), Gaps = 6/242 (2%)

Query: 347 LNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTY 406
           +N++EA+ L+  +I +    +++ ++ LLS + ++        LF  M++  +  DL TY
Sbjct: 48  MNLDEAIDLFCNMIQSRPLPSIVEFSKLLSNIAKSKNYDLVISLFHNMEICGIGHDLYTY 107

Query: 407 NILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEI--FNCLIDGLCKAGRLDNAWELFHKL 464
           NI+I+ LC+  C +  + L  + +M KF +  ++   + LI+G C+  R+  A +L  K+
Sbjct: 108 NIVINCLCR--CSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFGAVDLVSKM 165

Query: 465 PQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKT 524
            +      VV Y+ +I G C+ G +  A      ME++G   + VT+N+L+ G   + + 
Sbjct: 166 EEMRCKLDVVIYNTIIDGFCKTGLVNNALVLFGRMERDGVRADTVTYNSLVTGLCCSGRR 225

Query: 525 SKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKSSYRACLYVTIFQPS 584
           S    L+  M    R++VP+  TF+ +++   ++ K+ E     +   R C+   +F  +
Sbjct: 226 SDAARLMRDMV--MRDIVPNVITFTALINAFVREGKFLEAKKFYEEMIRRCIDPDVFTYN 283

Query: 585 SL 586
           S+
Sbjct: 284 SM 285


>gi|15221671|ref|NP_176495.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169919|sp|Q9CAN6.1|PPR97_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g63070, mitochondrial; Flags: Precursor
 gi|12323265|gb|AAG51617.1|AC010795_21 unknown protein; 38394-36551 [Arabidopsis thaliana]
 gi|332195929|gb|AEE34050.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 590

 Score =  309 bits (792), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 185/580 (31%), Positives = 299/580 (51%), Gaps = 46/580 (7%)

Query: 8   RCLFSSETVSKVKLSSLFKSPRQIAAVSSPETQLNEFLHENCKSGIIN---LNEARYFFG 64
           +CL     + K    +     R  A  SS + +      EN    ++    L++A   FG
Sbjct: 11  KCLHRHTVLLKGNPRTTLCWERSFAGASSDDCR------ENLSRKVLQDLKLDDAIGLFG 64

Query: 65  YMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKE 124
            M   +P P I  F+ L  A+AK   +D VIS   ++ ++G+  +  T +I IN F  + 
Sbjct: 65  DMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRS 124

Query: 125 R----------------------------GLCVENRIKEATWLFKNMIAFGVRPDVITYG 156
           +                            G C  NRI EA  L   M+  G +PD +T+ 
Sbjct: 125 QLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFT 184

Query: 157 TLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELF 216
           TL++G  +    S A+ L ++MV    +  L++      Y  +I+ LCK G  D A  L 
Sbjct: 185 TLVHGLFQHNKASEAVALVERMVVKGCQPDLVT------YGAVINGLCKRGEPDLALNLL 238

Query: 217 LEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKG 276
            +M+   I   VV+  T+I G C   + ++   LF +M   G +P++ T+N +I CLC  
Sbjct: 239 NKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNY 298

Query: 277 GKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSM-HSKGCKHTVVS 335
           G+ ++A+ LL  M+++ +NPD   +N+L+D +   G++  A +++  M  SK C   VV+
Sbjct: 299 GRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVA 358

Query: 336 YNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMK 395
           YN LI G+CK   VEE M ++R++   G+    +TY TL+ G FQA     AQ +F +M 
Sbjct: 359 YNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMV 418

Query: 396 LYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLD 455
              V PD+ TYNIL+DGLC N  V+ A+ +F  ++    +  I  +  +I+ LCKAG+++
Sbjct: 419 SDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVE 478

Query: 456 NAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLM 515
           + W+LF  L  KG+ P VVTY+ M+ G CRKG  E+A+   + M+++G  PN  T+NTL+
Sbjct: 479 DGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLI 538

Query: 516 HGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLL 555
              L++   +   EL+ +M         D +TF +V ++L
Sbjct: 539 RARLRDGDEAASAELIKEMRSC--GFAGDASTFGLVTNML 576



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 126/447 (28%), Positives = 229/447 (51%), Gaps = 9/447 (2%)

Query: 118 NCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKK 177
           +C  N  R +  + ++ +A  LF +M+     P ++ +  L++   +     + + L ++
Sbjct: 41  DCRENLSRKVLQDLKLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQ 100

Query: 178 MVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHG 237
           M     +N  IS  N+++YSI I+  C+   +  A  +  +M   G  P++V   +L++G
Sbjct: 101 M-----QNLGISH-NLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNG 154

Query: 238 FCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPD 297
           FC      E   L  +M+++G +P+ +TF  ++  L +  K +EA  L+E M+ +G  PD
Sbjct: 155 FCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPD 214

Query: 298 RFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYR 357
             TY ++++G C  G  D A  +   M     +  VV YN +I+G CK  ++++A  L+ 
Sbjct: 215 LVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFN 274

Query: 358 QIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNN 417
           ++ + G++  V TYN L+S L   G+   A +L  +M   N+ PDL  +N LID   K  
Sbjct: 275 KMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEG 334

Query: 418 CVQEAVKLFHMLEMNKFEF-GIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTY 476
            + EA KL+  +  +K  F  +  +N LI G CK  R++   E+F ++ Q+GLV   VTY
Sbjct: 335 KLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTY 394

Query: 477 SIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAE 536
           + +IHG  +    + A      M  +G  P+++T+N L+ G   N      + +   M  
Sbjct: 395 TTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQ- 453

Query: 537 PERNLVPDDTTFSIVVDLLAKDEKYHE 563
            +R++  D  T++ +++ L K  K  +
Sbjct: 454 -KRDMKLDIVTYTTMIEALCKAGKVED 479



 Score = 75.9 bits (185), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 56/233 (24%), Positives = 98/233 (42%), Gaps = 36/233 (15%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
           P + ++N L     K +  +  +  +R++   GL+ + +T   LI+       G      
Sbjct: 354 PDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIH-------GFFQARD 406

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLIS--- 189
              A  +FK M++ GV PD++TY  L++G C  GN+  AL + + M   D +  +++   
Sbjct: 407 CDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTT 466

Query: 190 --------------------------KTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRG 223
                                     K N+ +Y+ ++   C++GL ++A  LF+EMK  G
Sbjct: 467 MIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDG 526

Query: 224 INPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKG 276
             P      TLI      G+      L  EM   G   +  TF ++ + L  G
Sbjct: 527 PLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTFGLVTNMLHDG 579


>gi|357499119|ref|XP_003619848.1| CCP [Medicago truncatula]
 gi|355494863|gb|AES76066.1| CCP [Medicago truncatula]
          Length = 556

 Score =  309 bits (791), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 167/491 (34%), Positives = 267/491 (54%), Gaps = 34/491 (6%)

Query: 56  LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNI 115
           +++A   F ++ +MQP P +  FN + G+V K +H    IS  +++V  G+ P   TL+I
Sbjct: 65  IDDAVTLFNHLINMQPLPSVIQFNTIIGSVVKMKHCPVAISLLKQMVFKGVTPSIFTLSI 124

Query: 116 LINCF----------------------------GNKERGLCVENRIKEATWLFKNMIAFG 147
            INC+                                +GLC+   +++A     N+ A G
Sbjct: 125 WINCYCHLGEMGFAFSVLGIVLKRGYQPNNITLTTVMKGLCINGEVQKAMDFHDNVAAQG 184

Query: 148 VRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEG 207
           +  D + YGTLING C+ G    A +L ++M       G + K NI  Y++IIDS CK+ 
Sbjct: 185 MLLDEVCYGTLINGLCKIGRSIDAFQLLQEM------EGQVVKPNIVIYNMIIDSFCKDE 238

Query: 208 LVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFN 267
           L  KA++L+L++   GI+P ++  T+LI GFC  G W EV  L  EM++    PN+ TFN
Sbjct: 239 LTCKARDLYLKIVDMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFN 298

Query: 268 VMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSK 327
           V+ID  C+ GK+ EA G+  LM++RG  PD  T+N+L+ G+CL G +  AR++F ++  +
Sbjct: 299 VLIDAFCRKGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFER 358

Query: 328 GCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYA 387
           G    V SY ILI GYCK   ++EA+SL+ ++    +   ++ Y++L+ GL ++G+  YA
Sbjct: 359 GILPDVWSYTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYA 418

Query: 388 QKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDG 447
            +LF  +      P++ TYNILID  CK   +   ++LF ++        +  +N LI+G
Sbjct: 419 WELFSTINNDGPPPNVITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILING 478

Query: 448 LCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPN 507
            CK+ R+  A  L   +  K L P  +TY+ +  GLC+ G++  A +    M   G   +
Sbjct: 479 YCKSKRIREAMNLLSVMQSKNLAPDSITYNSLFDGLCKSGRISDAWELFKVMHVGGPPVD 538

Query: 508 VVTFNTLMHGF 518
           V T+N L+  F
Sbjct: 539 VATYNVLLDAF 549



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 99/301 (32%), Positives = 145/301 (48%), Gaps = 15/301 (4%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           C++G     E +     M +   +P + +FN+L  A  +          +  +V  G  P
Sbjct: 270 CRTG--QWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCRKGKMIEAQGMFNLMVKRGQQP 327

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           D +T N LI+       G C+   + EA  LF  +   G+ PDV +Y  LI G+C+   +
Sbjct: 328 DIVTFNTLIS-------GHCLHGNVLEARKLFDTVFERGILPDVWSYTILIIGYCKCKRI 380

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
             A+ L  +M   +         +I  YS +ID LCK G +  A ELF  +   G  P V
Sbjct: 381 DEAVSLFNEMRCKNMV------LDIVLYSSLIDGLCKSGRISYAWELFSTINNDGPPPNV 434

Query: 229 VVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLEL 288
           +    LI  FC   + +    LF  M   G  P +LT+N++I+  CK  +I EA  LL +
Sbjct: 435 ITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILINGYCKSKRIREAMNLLSV 494

Query: 289 MIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILN 348
           M  + L PD  TYNSL DG C  GRI  A E+F  MH  G    V +YN+L++ +CK  +
Sbjct: 495 MQSKNLAPDSITYNSLFDGLCKSGRISDAWELFKVMHVGGPPVDVATYNVLLDAFCKAQD 554

Query: 349 V 349
           V
Sbjct: 555 V 555



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 43/149 (28%), Positives = 64/149 (42%), Gaps = 30/149 (20%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CKSG   ++ A   F  + +  P P + ++N+L  A  K +  D  I  ++ +   GL P
Sbjct: 410 CKSG--RISYAWELFSTINNDGPPPNVITYNILIDAFCKIQDIDMGIELFKLMCGKGLTP 467

Query: 109 DFLTLNILINCFGNKER----------------------------GLCVENRIKEATWLF 140
             LT NILIN +   +R                            GLC   RI +A  LF
Sbjct: 468 TVLTYNILINGYCKSKRIREAMNLLSVMQSKNLAPDSITYNSLFDGLCKSGRISDAWELF 527

Query: 141 KNMIAFGVRPDVITYGTLINGFCRTGNLS 169
           K M   G   DV TY  L++ FC+  +++
Sbjct: 528 KVMHVGGPPVDVATYNVLLDAFCKAQDVA 556


>gi|356561677|ref|XP_003549106.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Glycine max]
          Length = 511

 Score =  308 bits (789), Expect = 5e-81,   Method: Compositional matrix adjust.
 Identities = 173/469 (36%), Positives = 254/469 (54%), Gaps = 34/469 (7%)

Query: 63  FGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGN 122
           F  M  M+P PP   FN +  ++  N+HY  VIS +++    G+ PD  TL+ILINCF +
Sbjct: 45  FNLMLLMRPPPPTFHFNNILSSLVNNKHYPTVISLFKQFEPNGITPDLCTLSILINCFCH 104

Query: 123 KE----------------------------RGLCVENRIKEATWLFKNMIAFGVRPDVIT 154
           +                             +GLC    IK+A +    ++A G + D ++
Sbjct: 105 QAHITLAFSVFANILKRGFHPNAITLNTLIKGLCFRGEIKKALYFHDQLVAQGFQLDQVS 164

Query: 155 YGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKE 214
           YGTLING C+TG      RL +K+       G   K ++  Y+ II+SLCK  L+  A +
Sbjct: 165 YGTLINGLCKTGETKAVARLLRKL------EGHSVKPDVVMYNTIINSLCKNKLLGDACD 218

Query: 215 LFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLC 274
           ++ EM  +GI+P VV  TTLIHGFC  G+ +E   L  EM      PN+ TFN++ID L 
Sbjct: 219 VYSEMIVKGISPDVVTYTTLIHGFCIMGHLKEAFSLLNEMKLKNINPNVCTFNILIDALS 278

Query: 275 KGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVV 334
           K GK+ EA  LL +M++  + PD FTYNSL+DGY LV  +  A+ +F SM  +G    V 
Sbjct: 279 KEGKMKEAKILLAVMMKACIKPDVFTYNSLIDGYFLVDEVKHAKYVFYSMAQRGVTPDVQ 338

Query: 335 SYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEM 394
            Y  +ING CK   V+EAMSL+ ++    +   ++TYN+L+ GL +      A  L   M
Sbjct: 339 CYTNMINGLCKTKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALCKRM 398

Query: 395 KLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRL 454
           K   ++PD+ +Y IL+DGLCK+  +++A ++F  L    +   +  +  LI+ LCKAG  
Sbjct: 399 KEQGIQPDVYSYTILLDGLCKSGRLEDAKEIFQRLLAKGYHLNVHAYTVLINRLCKAGFF 458

Query: 455 DNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNG 503
           D A +L  K+  KG +P  VT+ I+I  L  K + +KA   L  M   G
Sbjct: 459 DEALDLKSKMEDKGCMPDAVTFDIIIRALFEKDENDKAEKILREMIARG 507



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 83/323 (25%), Positives = 156/323 (48%), Gaps = 15/323 (4%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
           N  ++  CK+ +  L +A   +  M     SP + ++  L        H     S   ++
Sbjct: 201 NTIINSLCKNKL--LGDACDVYSEMIVKGISPDVVTYTTLIHGFCIMGHLKEAFSLLNEM 258

Query: 102 VSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLING 161
               + P+  T NILI+        L  E ++KEA  L   M+   ++PDV TY +LI+G
Sbjct: 259 KLKNINPNVCTFNILID-------ALSKEGKMKEAKILLAVMMKACIKPDVFTYNSLIDG 311

Query: 162 FCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKG 221
           +     +  A  +   M     + G+    ++  Y+ +I+ LCK  +VD+A  LF EMK 
Sbjct: 312 YFLVDEVKHAKYVFYSMA----QRGVTP--DVQCYTNMINGLCKTKMVDEAMSLFEEMKH 365

Query: 222 RGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINE 281
           + + P +V   +LI G C   + E    L   M + G +P++ ++ +++D LCK G++ +
Sbjct: 366 KNMIPDIVTYNSLIDGLCKNHHLERAIALCKRMKEQGIQPDVYSYTILLDGLCKSGRLED 425

Query: 282 ANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILIN 341
           A  + + ++ +G + +   Y  L++  C  G  D A ++   M  KGC    V+++I+I 
Sbjct: 426 AKEIFQRLLAKGYHLNVHAYTVLINRLCKAGFFDEALDLKSKMEDKGCMPDAVTFDIIIR 485

Query: 342 GYCKILNVEEAMSLYRQIISNGV 364
              +    ++A  + R++I+ G+
Sbjct: 486 ALFEKDENDKAEKILREMIARGL 508



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 69/234 (29%), Positives = 112/234 (47%), Gaps = 2/234 (0%)

Query: 353 MSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDG 412
           +SL++Q   NG+   + T + L++          A  +F  +      P+  T N LI G
Sbjct: 77  ISLFKQFEPNGITPDLCTLSILINCFCHQAHITLAFSVFANILKRGFHPNAITLNTLIKG 136

Query: 413 LCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPT 472
           LC    +++A+     L    F+     +  LI+GLCK G       L  KL    + P 
Sbjct: 137 LCFRGEIKKALYFHDQLVAQGFQLDQVSYGTLINGLCKTGETKAVARLLRKLEGHSVKPD 196

Query: 473 VVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLH 532
           VV Y+ +I+ LC+   L  A D    M   G +P+VVT+ TL+HGF       +   LL+
Sbjct: 197 VVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVTYTTLIHGFCIMGHLKEAFSLLN 256

Query: 533 KMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKSSYRACLYVTIFQPSSL 586
           +M    +N+ P+  TF+I++D L+K+ K  E   +     +AC+   +F  +SL
Sbjct: 257 EMKL--KNINPNVCTFNILIDALSKEGKMKEAKILLAVMMKACIKPDVFTYNSL 308


>gi|215794293|gb|ACJ70132.1| restorer-of-fertility [Brassica napus]
          Length = 667

 Score =  308 bits (789), Expect = 5e-81,   Method: Compositional matrix adjust.
 Identities = 189/597 (31%), Positives = 297/597 (49%), Gaps = 82/597 (13%)

Query: 26  KSPRQIAAVSSPETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAV 85
           KS  +         +L    HE     I  L++A   FGYM   +P P +  F  L G V
Sbjct: 32  KSSGKAGGFGGERLKLQSGFHE-----IKGLDDAIDLFGYMVRSRPLPCVIDFCKLLGVV 86

Query: 86  AKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKER-------------------- 125
            +    D VIS +RK+    +  +  +  ILI CF +  +                    
Sbjct: 87  VRMERPDVVISLHRKMEMRRIPCNIYSFTILIKCFCSCSKLPFALSTFGKITKLGFHPSL 146

Query: 126 --------GLCVENRIKEATWLFK-----NMIAF-------------------------- 146
                   GLCVE+R+ EA   F      N+IAF                          
Sbjct: 147 VTFSTLLHGLCVEDRVSEALHFFHQICKPNVIAFTTLMNGLCREGRVVEAVALLDRMVED 206

Query: 147 GVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKE 206
           G++P+ ITYGT+++G C+ G+   AL L +KM     E     K N+  YS IID L K+
Sbjct: 207 GLQPNQITYGTIVDGMCKMGDTVSALNLLRKM-----EEVSRIKPNVVIYSAIIDGLWKD 261

Query: 207 GLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTF 266
           G    A+ LF EM+ +GI+P +     +I+GFC +G W E   L  EM +    P+++TF
Sbjct: 262 GRQTDAQNLFSEMQEKGISPNLFTYNCMINGFCSSGRWSEAQRLLREMFERKMSPDVVTF 321

Query: 267 NVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHS 326
           +V+I+ L K GK  EA  L   M+ RG+ P+  TYNS++DG+    R+D A  +F  M +
Sbjct: 322 SVLINALVKEGKFFEAEELYNEMLPRGIIPNTITYNSMIDGFSKQNRLDAAERMFYLMAT 381

Query: 327 KGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGY 386
           KGC   V++++ILI+GYC    V++ M L  ++   G+    ITY TL+ G  Q G    
Sbjct: 382 KGCSPDVITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVANTITYTTLIHGFCQLGNLNA 441

Query: 387 AQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEF---------- 436
           A  L  EM    V P++ T N L+DGLC N  +++A+++F +++ +K +           
Sbjct: 442 ALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLKDALEMFKVMQKSKMDLDASHPFNDVE 501

Query: 437 -GIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDF 495
             ++ +N LI GL   G+   A EL+ ++P +GLVP  +TY+ +I GLC++ +L++A   
Sbjct: 502 PDVQTYNILICGLINEGKFSEAEELYEEMPHRGLVPDTITYNSVIDGLCKQSRLDEATQM 561

Query: 496 LLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVV 552
              M   G +P+VVTF TL++G+ +  +    +E+  +M    R +V +  T+  ++
Sbjct: 562 FDSMGSKGFSPDVVTFTTLINGYCKVGRVGDGLEVFCEMG--RRGIVANAITYRTLI 616



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 125/387 (32%), Positives = 196/387 (50%), Gaps = 26/387 (6%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           C SG    +EA+     M   + SP + +F++L  A+ K   +      Y +++  G++P
Sbjct: 294 CSSG--RWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIP 351

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           + +T N +I+ F         +NR+  A  +F  M   G  PDVIT+  LI+G+C    +
Sbjct: 352 NTITYNSMIDGFSK-------QNRLDAAERMFYLMATKGCSPDVITFSILIDGYCGAKRV 404

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
              ++L  +M       GL++  N  +Y+ +I   C+ G ++ A +L  EM   G+ P V
Sbjct: 405 DDGMKLLHEM----SRRGLVA--NTITYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNV 458

Query: 229 VVCTTLIHGFCCAGNWEEVNGLFIEM----LDLGP-------RPNLLTFNVMIDCLCKGG 277
           V C TL+ G C  G  ++   +F  M    +DL          P++ T+N++I  L   G
Sbjct: 459 VTCNTLLDGLCNNGKLKDALEMFKVMQKSKMDLDASHPFNDVEPDVQTYNILICGLINEG 518

Query: 278 KINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYN 337
           K +EA  L E M  RGL PD  TYNS++DG C   R+D A ++F SM SKG    VV++ 
Sbjct: 519 KFSEAEELYEEMPHRGLVPDTITYNSVIDGLCKQSRLDEATQMFDSMGSKGFSPDVVTFT 578

Query: 338 ILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLY 397
            LINGYCK+  V + + ++ ++   G+    ITY TL+ G  Q G    A  +F EM   
Sbjct: 579 TLINGYCKVGRVGDGLEVFCEMGRRGIVANAITYRTLIHGFCQVGNINGALDIFQEMISS 638

Query: 398 NVEPDLSTYNILIDGLCKNNCVQEAVK 424
            V PD  T   ++ GL     ++ AV+
Sbjct: 639 GVYPDTITIRNMLTGLWSKEELKRAVQ 665



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 56/222 (25%), Positives = 114/222 (51%), Gaps = 5/222 (2%)

Query: 339 LINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYN 398
           L +G+ +I  +++A+ L+  ++ +     VI +  LL  + +  +      L  +M++  
Sbjct: 47  LQSGFHEIKGLDDAIDLFGYMVRSRPLPCVIDFCKLLGVVVRMERPDVVISLHRKMEMRR 106

Query: 399 VEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAW 458
           +  ++ ++ ILI   C  + +  A+  F  +    F   +  F+ L+ GLC   R+  A 
Sbjct: 107 IPCNIYSFTILIKCFCSCSKLPFALSTFGKITKLGFHPSLVTFSTLLHGLCVEDRVSEAL 166

Query: 459 ELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGF 518
             FH++ +    P V+ ++ +++GLCR+G++ +A   L  M ++G  PN +T+ T++ G 
Sbjct: 167 HFFHQICK----PNVIAFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGM 222

Query: 519 LQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEK 560
            +   T   + LL KM E  R + P+   +S ++D L KD +
Sbjct: 223 CKMGDTVSALNLLRKMEEVSR-IKPNVVIYSAIIDGLWKDGR 263


>gi|356529360|ref|XP_003533262.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 594

 Score =  307 bits (787), Expect = 9e-81,   Method: Compositional matrix adjust.
 Identities = 192/567 (33%), Positives = 296/567 (52%), Gaps = 45/567 (7%)

Query: 27  SPRQIAAVSSPETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVA 86
           SP  I+  +     LN          ++ ++    FF  M  + P P I  FNLLFG VA
Sbjct: 30  SPPPISDAAHRTLLLNSIRTLETADAVVAVD----FFHRMLTLTPFPCIQDFNLLFGLVA 85

Query: 87  KNRHYDAVISFYRKLVSIGL-LPDFLTLNILINCFGNKER-------------------- 125
           K++HY   IS  + L S+G    D  TLNI INC  +  +                    
Sbjct: 86  KSQHYATAISLIKILHSLGDGSADVCTLNIAINCLCHMRKTTLGFAVLGLMTKIGLEPTL 145

Query: 126 --------GLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKK 177
                   GLC+E  +  A WL + M   G   +  TYG L+NG C+ G+ S AL   KK
Sbjct: 146 VTLNTIVNGLCIEGDVNHALWLVEKMENLGYHCNARTYGALVNGLCKIGDTSGALECLKK 205

Query: 178 MVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHG 237
           MV  +         N+  Y+ I+D LCK GLV +A  L  EM    + P VV    LI G
Sbjct: 206 MVKRNL------GPNVVVYNAILDGLCKRGLVGEALGLLHEMGVVNVEPNVVTYNCLIQG 259

Query: 238 FCCA-GNWEEVNGLFIEML-DLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLN 295
            C   G W E  GLF EM+ + G  P++ TF++++D  CK G +  A  ++  M++ G+ 
Sbjct: 260 LCGEFGGWREGVGLFNEMVAEKGIVPDVQTFSILVDGFCKEGLLLRAESVVGFMVRIGVE 319

Query: 296 PDRFTYNSLMDGYCLVGRIDTAREIFLSM--HSKGCKHTVVSYNILINGYCKILNVEEAM 353
           P+  TYNSL+ GYCL  +++ A  +F  M    +GC  +VV++N LI+G+CK+  V++AM
Sbjct: 320 PNVVTYNSLIAGYCLRSQMEEAMRVFGLMVREGEGCLPSVVTHNSLIHGWCKVKEVDKAM 379

Query: 354 SLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGL 413
           SL  +++  G+   V T+ +L+ G  +  +   A++LF  MK +   P+L T  +++DGL
Sbjct: 380 SLLSEMVGKGLDPDVFTWTSLIGGFCEVKKPLAARELFFTMKEHGQVPNLQTCAVVLDGL 439

Query: 414 CKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTV 473
            K     EAV LF  +  +  +  I I+N ++DG+CK G+L++A +L   +  KGL    
Sbjct: 440 LKCWLDSEAVTLFRAMMKSGLDLDIVIYNIMLDGMCKMGKLNDARKLLSCVLVKGLKIDS 499

Query: 474 VTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHK 533
            TY+IMI GLCR+G L+ A + L  M++NGC PN  ++N  + G L+    ++  + L  
Sbjct: 500 YTYNIMIKGLCREGLLDDAEELLRKMKENGCPPNKCSYNVFVQGLLRKYDIARSRKYLQI 559

Query: 534 MAEPERNLVPDDTTFSIVVDLLAKDEK 560
           M   ++    D TT  +++  L+ +E+
Sbjct: 560 MK--DKGFPVDATTAELLIRFLSANEE 584


>gi|297807691|ref|XP_002871729.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297317566|gb|EFH47988.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 504

 Score =  307 bits (787), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 167/464 (35%), Positives = 263/464 (56%), Gaps = 15/464 (3%)

Query: 46  HENCKSGI--INLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVS 103
            E  ++GI  + L+++   F +M   +P P I+ F+ L  A++K + YD VI  + ++  
Sbjct: 50  REMLRNGIRYMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQM 109

Query: 104 IGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFC 163
           +G+  +  T NIL+NCF       C  +++  A      M+  G  PD++T+G+L+NGFC
Sbjct: 110 LGIPHNLCTCNILLNCF-------CRCSQLSLALSFLGKMMKLGHEPDIVTFGSLLNGFC 162

Query: 164 RTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRG 223
           R   +  AL +  +MV   YE       N+  Y+ IID LCK   VD A +L   M+  G
Sbjct: 163 RGDRIYDALYMFDRMVEMGYE------PNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDG 216

Query: 224 INPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEAN 283
           I P  V   +LI G C +G W++   +   M      P++ TFN +ID   K G+I+EA 
Sbjct: 217 IRPDAVTYNSLISGLCNSGRWDDATRMVSCMTKREIYPDVFTFNALIDACVKEGRISEAE 276

Query: 284 GLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGY 343
            L E MI+R L+PD  TY+ L+ G C+  R+D A ++F  M SKGC   VV+Y+ILINGY
Sbjct: 277 ELYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEQMFGFMVSKGCFPDVVTYSILINGY 336

Query: 344 CKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDL 403
           CK   VE  M L+ ++   GV +  +TY  L+ G  +AG+   A+++F  M    V P++
Sbjct: 337 CKSKKVEHGMKLFCEMSQRGVVRNTVTYTVLIQGYCRAGKLNVAEEIFKWMVFCGVPPNI 396

Query: 404 STYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHK 463
            TYN+L+ GLC N  +++A+ +   ++ +  +  I  +N +I G+CKAG + +AW+L+  
Sbjct: 397 ITYNVLLHGLCDNGKIEKALVILADMQKSGMDADIVTYNIIIRGMCKAGEVADAWDLYCS 456

Query: 464 LPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPN 507
           L  KGL P + TY+ M+ GL +KG   +A+     M+++G  PN
Sbjct: 457 LNLKGLTPDIWTYTAMMLGLYKKGLRGEADALFRKMKEDGILPN 500



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 119/421 (28%), Positives = 215/421 (51%), Gaps = 8/421 (1%)

Query: 132 RIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKT 191
           ++ ++  LF +M+     P +  +  L++   +     V + L ++M        L    
Sbjct: 61  KLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQM------QMLGIPH 114

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
           N+ + +I+++  C+   +  A     +M   G  P +V   +L++GFC      +   +F
Sbjct: 115 NLCTCNILLNCFCRCSQLSLALSFLGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDALYMF 174

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
             M+++G  PN++ +N +ID LCK  +++ A  LL  M   G+ PD  TYNSL+ G C  
Sbjct: 175 DRMVEMGYEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNS 234

Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
           GR D A  +   M  +     V ++N LI+   K   + EA  LY ++I   +   ++TY
Sbjct: 235 GRWDDATRMVSCMTKREIYPDVFTFNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTY 294

Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
           + L+ GL    +   A+++F  M      PD+ TY+ILI+G CK+  V+  +KLF  +  
Sbjct: 295 SLLIYGLCMYSRLDEAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQ 354

Query: 432 NKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEK 491
                    +  LI G C+AG+L+ A E+F  +   G+ P ++TY++++HGLC  GK+EK
Sbjct: 355 RGVVRNTVTYTVLIQGYCRAGKLNVAEEIFKWMVFCGVPPNIITYNVLLHGLCDNGKIEK 414

Query: 492 ANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIV 551
           A   L  M+K+G   ++VT+N ++ G  +  + +   +L   +    + L PD  T++ +
Sbjct: 415 ALVILADMQKSGMDADIVTYNIIIRGMCKAGEVADAWDLYCSLN--LKGLTPDIWTYTAM 472

Query: 552 V 552
           +
Sbjct: 473 M 473



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 59/244 (24%), Positives = 125/244 (51%), Gaps = 6/244 (2%)

Query: 335 SYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEM 394
            Y  ++    + + +++++ L+  ++      ++  ++ LLS + +  +      L+++M
Sbjct: 48  DYREMLRNGIRYMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQM 107

Query: 395 KLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKF--EFGIEIFNCLIDGLCKAG 452
           ++  +  +L T NIL++  C+  C Q ++ L  + +M K   E  I  F  L++G C+  
Sbjct: 108 QMLGIPHNLCTCNILLNCFCR--CSQLSLALSFLGKMMKLGHEPDIVTFGSLLNGFCRGD 165

Query: 453 RLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFN 512
           R+ +A  +F ++ + G  P VV Y+ +I GLC+  +++ A D L  ME +G  P+ VT+N
Sbjct: 166 RIYDALYMFDRMVEMGYEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYN 225

Query: 513 TLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKSSY 572
           +L+ G   + +      ++  M   +R + PD  TF+ ++D   K+ +  E   + +   
Sbjct: 226 SLISGLCNSGRWDDATRMVSCMT--KREIYPDVFTFNALIDACVKEGRISEAEELYEEMI 283

Query: 573 RACL 576
           R  L
Sbjct: 284 RRSL 287


>gi|15237384|ref|NP_197167.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171647|sp|Q9FMD3.1|PP389_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g16640, mitochondrial; Flags: Precursor
 gi|10176973|dbj|BAB10191.1| unnamed protein product [Arabidopsis thaliana]
 gi|110737318|dbj|BAF00605.1| hypothetical protein [Arabidopsis thaliana]
 gi|332004938|gb|AED92321.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 504

 Score =  307 bits (786), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 166/464 (35%), Positives = 263/464 (56%), Gaps = 15/464 (3%)

Query: 46  HENCKSGI--INLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVS 103
            E  ++GI  + L+++   F +M   +P P I+ F+ L  A++K + YD VI  + ++  
Sbjct: 50  REMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQM 109

Query: 104 IGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFC 163
           +G+  +  T NIL+NCF       C  +++  A      MI  G  P ++T+G+L+NGFC
Sbjct: 110 LGIPHNLCTCNILLNCF-------CRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFC 162

Query: 164 RTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRG 223
           R   +  AL +  +MV      G+  K N+  Y+ IID LCK   VD A +L   M+  G
Sbjct: 163 RGDRVYDALYMFDQMV------GMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDG 216

Query: 224 INPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEAN 283
           I P VV   +LI G C +G W +   +   M      P++ TFN +ID   K G+++EA 
Sbjct: 217 IGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAE 276

Query: 284 GLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGY 343
              E MI+R L+PD  TY+ L+ G C+  R+D A E+F  M SKGC   VV+Y+ILINGY
Sbjct: 277 EFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGY 336

Query: 344 CKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDL 403
           CK   VE  M L+ ++   GV +  +TY  L+ G  +AG+   A+++F  M    V P++
Sbjct: 337 CKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNI 396

Query: 404 STYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHK 463
            TYN+L+ GLC N  +++A+ +   ++ N  +  I  +N +I G+CKAG + +AW+++  
Sbjct: 397 ITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCS 456

Query: 464 LPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPN 507
           L  +GL+P + TY+ M+ GL +KG   +A+     M+++G  PN
Sbjct: 457 LNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILPN 500



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 122/438 (27%), Positives = 224/438 (51%), Gaps = 8/438 (1%)

Query: 132 RIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKT 191
           ++ ++  LF +M+     P +  +  L++   +     V + L ++M        L    
Sbjct: 61  KLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQM------QMLGIPH 114

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
           N+ + +I+++  C+   +  A     +M   G  P++V   +L++GFC      +   +F
Sbjct: 115 NLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMF 174

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
            +M+ +G +PN++ +N +ID LCK  +++ A  LL  M + G+ PD  TYNSL+ G C  
Sbjct: 175 DQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSS 234

Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
           GR   A  +   M  +     V ++N LI+   K   V EA   Y ++I   +   ++TY
Sbjct: 235 GRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTY 294

Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
           + L+ GL    +   A+++F  M      PD+ TY+ILI+G CK+  V+  +KLF  +  
Sbjct: 295 SLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQ 354

Query: 432 NKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEK 491
                    +  LI G C+AG+L+ A E+F ++   G+ P ++TY++++HGLC  GK+EK
Sbjct: 355 RGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEK 414

Query: 492 ANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIV 551
           A   L  M+KNG   ++VT+N ++ G  +  + +   ++   +    + L+PD  T++ +
Sbjct: 415 ALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLN--CQGLMPDIWTYTTM 472

Query: 552 VDLLAKDEKYHECSAVSK 569
           +  L K     E  A+ +
Sbjct: 473 MLGLYKKGLRREADALFR 490



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 59/221 (26%), Positives = 120/221 (54%), Gaps = 6/221 (2%)

Query: 345 KILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLS 404
           + + +++++ L+  ++      ++  ++ LLS + +  +      L+++M++  +  +L 
Sbjct: 58  RFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLC 117

Query: 405 TYNILIDGLCKNNCVQEAVKLFHMLEMNKF--EFGIEIFNCLIDGLCKAGRLDNAWELFH 462
           T NIL++  C+  C Q ++ L  + +M K   E  I  F  L++G C+  R+ +A  +F 
Sbjct: 118 TCNILLNCFCR--CSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFD 175

Query: 463 KLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNN 522
           ++   G  P VV Y+ +I GLC+  +++ A D L  MEK+G  P+VVT+N+L+ G   + 
Sbjct: 176 QMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSG 235

Query: 523 KTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
           + S    ++  M   +R + PD  TF+ ++D   K+ +  E
Sbjct: 236 RWSDATRMVSCMT--KREIYPDVFTFNALIDACVKEGRVSE 274


>gi|357499981|ref|XP_003620279.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495294|gb|AES76497.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 585

 Score =  306 bits (784), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 167/480 (34%), Positives = 270/480 (56%), Gaps = 24/480 (5%)

Query: 55  NLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLN 114
           ++++A   F  +    P+PP   FN + G++ K++HY  V+S  +K+   G+ P+    N
Sbjct: 66  DVDDAVSLFNRLLRQNPTPPAFEFNKILGSLVKSKHYHTVLSLSQKMEFRGIKPNLFNCN 125

Query: 115 ILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRL 174
           ILI CF   + GL +  +I +A      ++A G   D ++YGTLI+G C+ G    AL L
Sbjct: 126 ILIYCFC--QLGL-IPCQIHQAFLFHDKLVALGFHLDQVSYGTLIHGLCKVGETRAALDL 182

Query: 175 HKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTL 234
            +++      +G + + N   Y+ +I  +CK+  V+ A +L+ EM  +GI+P VV  + L
Sbjct: 183 LQRV------DGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSAL 236

Query: 235 IHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGL 294
           I GF   G  ++   LF +++    +P+  TFN+++D  CK  K+ E   +  +M+++G+
Sbjct: 237 ISGFFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGI 296

Query: 295 NPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMS 354
            PD  TYNSLMDGYCLV  ++TA+ IF +M   G    + SYNILING+CKI  V++AM+
Sbjct: 297 IPDVVTYNSLMDGYCLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMN 356

Query: 355 LYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLC 414
           L+ ++    +   V+TYN+L+ GL ++G+  YA +L D+M    V P++ TYN +ID L 
Sbjct: 357 LFNEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDALF 416

Query: 415 KNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVV 474
           K + V +A+ L    +    +  +  +  LIDGLCK                +G   TV 
Sbjct: 417 KTHQVDKAIALITKFKDQGIQPSMYTYTILIDGLCKV---------------EGYDITVN 461

Query: 475 TYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKM 534
           TY++MIHG C+KG  ++A   L  M+ + C PN VT+   +   L NN+  K  +L  +M
Sbjct: 462 TYNVMIHGFCKKGLFDEALSLLSKMKDSSCIPNAVTYEITIRSLLDNNENDKAEKLFREM 521



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 112/385 (29%), Positives = 203/385 (52%), Gaps = 6/385 (1%)

Query: 187 LISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEE 246
           L++K N  SYS    +      VD A  LF  +  +   P       ++     + ++  
Sbjct: 45  LLTKINFISYSSTSTTFHSNNDVDDAVSLFNRLLRQNPTPPAFEFNKILGSLVKSKHYHT 104

Query: 247 VNGLFIEMLDLGPRPNLLTFNVMIDCLCKGG----KINEANGLLELMIQRGLNPDRFTYN 302
           V  L  +M   G +PNL   N++I C C+ G    +I++A    + ++  G + D+ +Y 
Sbjct: 105 VLSLSQKMEFRGIKPNLFNCNILIYCFCQLGLIPCQIHQAFLFHDKLVALGFHLDQVSYG 164

Query: 303 SLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISN 362
           +L+ G C VG    A ++   +  K  +   V YN +I G CK  +V +A  LY +++S 
Sbjct: 165 TLIHGLCKVGETRAALDLLQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSK 224

Query: 363 GVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEA 422
           G+   V+TY+ L+SG F  G+   A  LF+++ L N++PD  T+NIL+DG CK+  ++E 
Sbjct: 225 GISPNVVTYSALISGFFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEG 284

Query: 423 VKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHG 482
             +F M+        +  +N L+DG C    ++ A  +F+ + Q G+ P + +Y+I+I+G
Sbjct: 285 KTVFAMMMKQGIIPDVVTYNSLMDGYCLVKEVNTAKSIFNTMAQGGVNPDIRSYNILING 344

Query: 483 LCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLV 542
            C+  K++KA +    M      PNVVT+N+L+ G  ++ + S  ++L+ +M   +R + 
Sbjct: 345 FCKIKKVDKAMNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMH--DRGVP 402

Query: 543 PDDTTFSIVVDLLAKDEKYHECSAV 567
           P+  T++ ++D L K  +  +  A+
Sbjct: 403 PNILTYNSIIDALFKTHQVDKAIAL 427



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 96/355 (27%), Positives = 159/355 (44%), Gaps = 36/355 (10%)

Query: 40  QLNEFLHENCKSGII---NLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVIS 96
           QLN  ++     G+    ++N+A   +  M     SP + +++ L             I 
Sbjct: 192 QLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFVVGKLKDAID 251

Query: 97  FYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYG 156
            + K++   + PD  T NIL++       G C + ++KE   +F  M+  G+ PDV+TY 
Sbjct: 252 LFNKIILENIKPDGYTFNILVD-------GFCKDRKMKEGKTVFAMMMKQGIIPDVVTYN 304

Query: 157 TLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELF 216
           +L++G+C    ++ A  +   M  G          +I SY+I+I+  CK   VDKA  LF
Sbjct: 305 SLMDGYCLVKEVNTAKSIFNTMAQGGVN------PDIRSYNILINGFCKIKKVDKAMNLF 358

Query: 217 LEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKG 276
            EM  + I P VV   +LI G   +G       L  +M D G  PN+LT+N +ID L K 
Sbjct: 359 NEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDALFKT 418

Query: 277 GKINEANGLLELMIQRGLNPDRFTY--------------------NSLMDGYCLVGRIDT 316
            ++++A  L+     +G+ P  +TY                    N ++ G+C  G  D 
Sbjct: 419 HQVDKAIALITKFKDQGIQPSMYTYTILIDGLCKVEGYDITVNTYNVMIHGFCKKGLFDE 478

Query: 317 AREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
           A  +   M    C    V+Y I I         ++A  L+R++I+ G+     +Y
Sbjct: 479 ALSLLSKMKDSSCIPNAVTYEITIRSLLDNNENDKAEKLFREMITRGLLNRSASY 533



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 72/315 (22%), Positives = 149/315 (47%), Gaps = 6/315 (1%)

Query: 250 LFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYC 309
             I  L L  + N ++++           +++A  L   ++++   P  F +N ++    
Sbjct: 38  FLISFLILLTKINFISYSSTSTTFHSNNDVDDAVSLFNRLLRQNPTPPAFEFNKILGSLV 97

Query: 310 LVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKI----LNVEEAMSLYRQIISNGVR 365
                 T   +   M  +G K  + + NILI  +C++      + +A   + ++++ G  
Sbjct: 98  KSKHYHTVLSLSQKMEFRGIKPNLFNCNILIYCFCQLGLIPCQIHQAFLFHDKLVALGFH 157

Query: 366 QTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKL 425
              ++Y TL+ GL + G+   A  L   +    V+ +   YN +I G+CK+  V +A  L
Sbjct: 158 LDQVSYGTLIHGLCKVGETRAALDLLQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDL 217

Query: 426 FHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCR 485
           +  +        +  ++ LI G    G+L +A +LF+K+  + + P   T++I++ G C+
Sbjct: 218 YSEMVSKGISPNVVTYSALISGFFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCK 277

Query: 486 KGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDD 545
             K+++       M K G  P+VVT+N+LM G+    + +    + + MA+   N  PD 
Sbjct: 278 DRKMKEGKTVFAMMMKQGIIPDVVTYNSLMDGYCLVKEVNTAKSIFNTMAQGGVN--PDI 335

Query: 546 TTFSIVVDLLAKDEK 560
            +++I+++   K +K
Sbjct: 336 RSYNILINGFCKIKK 350


>gi|356561776|ref|XP_003549154.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 567

 Score =  306 bits (784), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 195/548 (35%), Positives = 299/548 (54%), Gaps = 34/548 (6%)

Query: 27  SPRQIAAVSSPETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVA 86
           SP  I+  ++    LN       +S    ++ +  FF  M  + P P I  FNLLFG VA
Sbjct: 30  SPPSISDAAARTRLLNSI--RTLQSADAAVSVSVDFFHRMLTLNPFPCIQDFNLLFGIVA 87

Query: 87  KNRHYDAVISFYRKLVSIGL-LPDFLTLNILINCFGNKERGLCVENRIKEATWLFKN--- 142
           K++H+   IS  + L S+G  + D  TLNILINC       LC   R+++ T  F     
Sbjct: 88  KSQHFATAISLIKTLHSLGYEIADVCTLNILINC-------LC---RLRKTTLGFAVLGL 137

Query: 143 MIAFGVRPDVITYGTL------INGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSY 196
           M   G+ P ++T  T+      +NG C+ G+ S AL   KKMV  + E       N+  Y
Sbjct: 138 MTKIGLEPTLVTLNTIANGLCIVNGLCKIGDTSGALESLKKMVKRNLE------PNVVVY 191

Query: 197 SIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCC-AGNWEEVNGLFIEML 255
           + I+D LCK GLV +A  LF EM    + P VV    LI G C   G W E  GLF EM+
Sbjct: 192 NAILDGLCKRGLVGEALGLFYEMGVVNVEPNVVTYNCLIQGLCGEVGGWREGVGLFNEMV 251

Query: 256 -DLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRI 314
            + G  P++ TF+++++  CK G +  A  ++  MI+ G+  +  TYNSL+ GYCL  R+
Sbjct: 252 AEKGIVPDVQTFSILVNGFCKEGLLLRAESMVGFMIRIGVELNVVTYNSLISGYCLRNRM 311

Query: 315 DTAREIFLSM--HSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYN 372
           + A  +F  M    +GC  +VV+YN LI+G+CK+  V +AMSL  +++  G+   V T+ 
Sbjct: 312 EEAVRVFDLMVREGEGCLPSVVTYNSLIHGWCKVKKVNKAMSLLSEMVGKGLDPDVFTWT 371

Query: 373 TLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMN 432
           +L+ G F+ G+   A++LF  MK     P L T  +++DGL K     EA+ LF  +E +
Sbjct: 372 SLIGGFFEVGKPLAAKELFITMKDQGQVPILQTCAVVLDGLYKCWLDSEAMTLFRAMEKS 431

Query: 433 KFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKA 492
             +  I I+N ++DG+CK G+L++A +L   +  KGL     T++IMI GLCR+G L+ A
Sbjct: 432 GLDLDIVIYNIMLDGMCKMGKLNDARKLLSFVLVKGLKIDSYTWNIMIKGLCREGLLDDA 491

Query: 493 NDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVV 552
            + L  M++NGC PN  ++N  + G L+    S+  + L  M   ++    D TT  +++
Sbjct: 492 EELLRKMKENGCPPNKCSYNVFVQGLLRKYDISRSRKYLQIMK--DKGFPVDATTAELLI 549

Query: 553 DLLAKDEK 560
             L+ +E+
Sbjct: 550 RFLSANEE 557



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 85/305 (27%), Positives = 154/305 (50%), Gaps = 9/305 (2%)

Query: 316 TAREIFLSMHSKGCK-HTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTL 374
           TA  +  ++HS G +   V + NILIN  C++       ++   +   G+  T++T NT+
Sbjct: 94  TAISLIKTLHSLGYEIADVCTLNILINCLCRLRKTTLGFAVLGLMTKIGLEPTLVTLNTI 153

Query: 375 ------LSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHM 428
                 ++GL + G    A +   +M   N+EP++  YN ++DGLCK   V EA+ LF+ 
Sbjct: 154 ANGLCIVNGLCKIGDTSGALESLKKMVKRNLEPNVVVYNAILDGLCKRGLVGEALGLFYE 213

Query: 429 LEMNKFEFGIEIFNCLIDGLC-KAGRLDNAWELFHKL-PQKGLVPTVVTYSIMIHGLCRK 486
           + +   E  +  +NCLI GLC + G       LF+++  +KG+VP V T+SI+++G C++
Sbjct: 214 MGVVNVEPNVVTYNCLIQGLCGEVGGWREGVGLFNEMVAEKGIVPDVQTFSILVNGFCKE 273

Query: 487 GKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDT 546
           G L +A   + +M + G   NVVT+N+L+ G+   N+  + V +   M       +P   
Sbjct: 274 GLLLRAESMVGFMIRIGVELNVVTYNSLISGYCLRNRMEEAVRVFDLMVREGEGCLPSVV 333

Query: 547 TFSIVVDLLAKDEKYHECSAVSKSSYRACLYVTIFQPSSLGSMIGCTVRLMPQPEMSDTL 606
           T++ ++    K +K ++  ++        L   +F  +SL        + +   E+  T+
Sbjct: 334 TYNSLIHGWCKVKKVNKAMSLLSEMVGKGLDPDVFTWTSLIGGFFEVGKPLAAKELFITM 393

Query: 607 GDDGD 611
            D G 
Sbjct: 394 KDQGQ 398


>gi|115482712|ref|NP_001064949.1| Os10g0495200 [Oryza sativa Japonica Group]
 gi|78708847|gb|ABB47822.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113639558|dbj|BAF26863.1| Os10g0495200 [Oryza sativa Japonica Group]
          Length = 782

 Score =  306 bits (783), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 169/510 (33%), Positives = 268/510 (52%), Gaps = 21/510 (4%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPS---PPISSFNLLFGAVAKNRHYDAVISFY 98
           N  LH  C SG     + +   G +  M+     P + +++ L   + KN         +
Sbjct: 275 NSILHGYCSSG-----QPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIF 329

Query: 99  RKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTL 158
             +   GL PD  T   L+  +  K         + E   L   M+  G++PD   +  L
Sbjct: 330 DSMTKRGLEPDIATYRTLLQGYATK-------GALVEMHALLDLMVRNGIQPDHHVFNIL 382

Query: 159 INGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLE 218
           I  + +   +  A+ +  KM     ++GL    N+  Y  +ID LCK G VD A   F +
Sbjct: 383 ICAYAKQEKVDQAMLVFSKM----RQHGL--NPNVVCYGTVIDVLCKSGSVDDAMLYFEQ 436

Query: 219 MKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGK 278
           M   G+ P ++V T+LIHG C    W++   L +EMLD G   N + FN +ID  CK G+
Sbjct: 437 MIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGR 496

Query: 279 INEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNI 338
           + E+  L +LM++ G+ PD  TYN+L+DG CL G++D A ++  SM S G K  +V+Y  
Sbjct: 497 VIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGT 556

Query: 339 LINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYN 398
           LINGYC++  +++A++L+++++S+GV   +ITYN +L GLF   +   A++L+  +    
Sbjct: 557 LINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSG 616

Query: 399 VEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAW 458
            + +LSTYNI++ GLCKNN   EA+++F  L +   +     FN +I  L K GR+D A 
Sbjct: 617 TQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAK 676

Query: 459 ELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGF 518
           +LF      GLVP V TYS+M   L  +G LE+ +D  L ME+NGC+ +    N+++   
Sbjct: 677 DLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKL 736

Query: 519 LQNNKTSKVVELLHKMAEPERNLVPDDTTF 548
           LQ    ++    L  + E   +L     +F
Sbjct: 737 LQRGDITRAGTYLFMIDEKHFSLEASTASF 766



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 144/502 (28%), Positives = 239/502 (47%), Gaps = 21/502 (4%)

Query: 58  EARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIG---LLPDFLTLN 114
           +AR+ F  +        I   N     VA++    A +S Y ++   G   + P   T  
Sbjct: 38  DARHVFDELLRRGRGASIYGLNRALADVARHSPA-AAVSRYNRMARAGAGKVTPTVHTYA 96

Query: 115 ILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRL 174
           ILI C        C   R+        N++  G R D IT+  L+ G C     S A+ +
Sbjct: 97  ILIGC-------CCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDI 149

Query: 175 HKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEM---KGRGINPAVVVC 231
             + ++   E G I   ++FSY+ ++  LC E    +A EL   M   +G G  P VV  
Sbjct: 150 VLRRMT---ELGCIP--DVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSY 204

Query: 232 TTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQ 291
            T+++GF   G+ ++    + EMLD G  P+++T++ +I  LCK   +++A  +L  M++
Sbjct: 205 NTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVK 264

Query: 292 RGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEE 351
            G+ PD  TYNS++ GYC  G+   A      M S G +  VV+Y+ L+N  CK     E
Sbjct: 265 NGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTE 324

Query: 352 AMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILID 411
           A  ++  +   G+   + TY TLL G    G       L D M    ++PD   +NILI 
Sbjct: 325 ARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILIC 384

Query: 412 GLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVP 471
              K   V +A+ +F  +  +     +  +  +ID LCK+G +D+A   F ++  +GL P
Sbjct: 385 AYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTP 444

Query: 472 TVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELL 531
            ++ Y+ +IHGLC   K +KA + +L M   G   N + FN+++    +  +  +  +L 
Sbjct: 445 NIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLF 504

Query: 532 HKMAEPERNLVPDDTTFSIVVD 553
             M      + PD  T++ ++D
Sbjct: 505 DLMVRI--GVKPDIITYNTLID 524



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 114/462 (24%), Positives = 217/462 (46%), Gaps = 38/462 (8%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CK+G     EAR  F  MT     P I+++  L    A       + +    +V  G+ P
Sbjct: 317 CKNG--RSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQP 374

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           D    NILI  +  +E+       + +A  +F  M   G+ P+V+ YGT+I+  C++G++
Sbjct: 375 DHHVFNILICAYAKQEK-------VDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSV 427

Query: 169 SVALRLHKKMVSGDYENGLISKT-----------------------------NIFSYSII 199
             A+   ++M+       +I  T                             N   ++ I
Sbjct: 428 DDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSI 487

Query: 200 IDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGP 259
           IDS CKEG V ++++LF  M   G+ P ++   TLI G C AG  +E   L   M+ +G 
Sbjct: 488 IDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGV 547

Query: 260 RPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTARE 319
           +P+++T+  +I+  C+  ++++A  L + M+  G++P+  TYN ++ G     R   A+E
Sbjct: 548 KPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKE 607

Query: 320 IFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLF 379
           +++S+   G +  + +YNI+++G CK    +EA+ +++ +    ++    T+N ++  L 
Sbjct: 608 LYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALL 667

Query: 380 QAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIE 439
           + G+   A+ LF       + PD+ TY+++ + L +   ++E   LF  +E N       
Sbjct: 668 KCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSR 727

Query: 440 IFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIH 481
           + N ++  L + G +  A      + +K       T S ++ 
Sbjct: 728 MLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLEASTASFLLE 769



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 71/300 (23%), Positives = 127/300 (42%), Gaps = 38/300 (12%)

Query: 41  LNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRK 100
            N  +  +CK G   + E+   F  M  +   P I ++N L          D        
Sbjct: 484 FNSIIDSHCKEG--RVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLAS 541

Query: 101 LVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLIN 160
           +VS+G+ PD +T   LIN       G C  +R+ +A  LFK M++ GV P++ITY  ++ 
Sbjct: 542 MVSVGVKPDIVTYGTLIN-------GYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQ 594

Query: 161 GFCRTGNLSVALRLHKKMVSGDYENGL---------ISKTNIF----------------- 194
           G   T   + A  L+  +     +  L         + K N+                  
Sbjct: 595 GLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQL 654

Query: 195 ---SYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
              +++I+I +L K G +D+AK+LF      G+ P V   + +       G+ EE++ LF
Sbjct: 655 ETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLF 714

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
           + M + G   +    N ++  L + G I  A   L ++ ++  + +  T + L++   +V
Sbjct: 715 LSMEENGCSADSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLEASTASFLLESSPIV 774


>gi|242067353|ref|XP_002448953.1| hypothetical protein SORBIDRAFT_05g002330 [Sorghum bicolor]
 gi|241934796|gb|EES07941.1| hypothetical protein SORBIDRAFT_05g002330 [Sorghum bicolor]
          Length = 734

 Score =  305 bits (781), Expect = 4e-80,   Method: Compositional matrix adjust.
 Identities = 178/529 (33%), Positives = 275/529 (51%), Gaps = 36/529 (6%)

Query: 68  HMQPSPP-ISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERG 126
           H +  PP + ++  +   + K + +D     +++++  G+ P+  T N LI+       G
Sbjct: 199 HGRSCPPNVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGVKPNNDTYNCLIH-------G 251

Query: 127 LCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLH-KKMVSGDY-- 183
                + KE   + + M A G++PD  TYG+L+N  C    +   L L  +  +S D+  
Sbjct: 252 YLSIGKWKEVVQMLEKMSARGLKPDCYTYGSLLNYLCALSEMHSFLDLMVENGLSPDHHI 311

Query: 184 ---------ENGLISKT--------------NIFSYSIIIDSLCKEGLVDKAKELFLEMK 220
                    + G+I K               N+ +Y  +ID+LCK G VD A+  F +M 
Sbjct: 312 FNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMI 371

Query: 221 GRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKIN 280
             G+ P +VV  +L++G C    WE    L  EMLD G  PN + FN +I  LC  G++ 
Sbjct: 372 NEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVM 431

Query: 281 EANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILI 340
           E   L++LM   G+ PD F+Y  L+ GYCL GR D A ++F  M S G   T V+YN L+
Sbjct: 432 EGRRLIDLMEHVGVRPDAFSYTPLISGYCLAGRTDEAEKVFDGMVSIGLSPTEVTYNTLL 491

Query: 341 NGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVE 400
           +GYC    +++A  L+R+++  GV   V+TYNT+L GLFQ  +   A++L+  M     +
Sbjct: 492 HGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTK 551

Query: 401 PDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWEL 460
            D+ TYNI+++GLCK+NCV EA K+F  L     +  I  F  +I  L K GR ++A +L
Sbjct: 552 CDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDL 611

Query: 461 FHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQ 520
           F  +P  GLVP VVTY ++   L  +G LE+ +     MEKNG APN    N L+   L 
Sbjct: 612 FAAIPANGLVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLH 671

Query: 521 NNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSK 569
               S+    L K+   ERN   + +T S+++ +   DE  H   ++ +
Sbjct: 672 RGDISRAGAYLSKL--DERNFSVEASTTSLLISIFTSDEYQHHAKSLPE 718



 Score =  244 bits (622), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 166/574 (28%), Positives = 270/574 (47%), Gaps = 53/574 (9%)

Query: 28  PRQIAAVSSPETQLNEFLHENCKSGIINLNEA-RYFFGYMTHMQPSPPISSFNLLFGAVA 86
           PR ++ V     +L   +    +SG + L++A + F   + H +P+  + +FN +  AV+
Sbjct: 2   PRCVSTVRDRCLELERIIAARARSGSLGLDDALKLFDELLIHARPAS-VVAFNQILNAVS 60

Query: 87  KNRHYDA-----------VISFYRKLV---SIGLLPDFLTLNILINCFGNKER------- 125
           +                 V+S + ++V   SI + P+  T +ILI C     R       
Sbjct: 61  RASRASGRRSSSTSESELVVSLFNRMVRECSIKVAPNTCTYSILIGCLCRMGRLKHSFAT 120

Query: 126 ---------------------GLCVENRIKEA-TWLFKNMIAFGVRPDVITYGTLINGFC 163
                                GLC   R+ EA   L + M   G  PD ++Y  L+ GFC
Sbjct: 121 FGLILKTGWRVNDIVINQLLKGLCDGKRVGEAMDVLLQRMPELGCTPDTVSYSILLKGFC 180

Query: 164 RTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRG 223
                  AL L + M +   ++G     N+ +Y+ +ID LCK  L D+A+ +F +M   G
Sbjct: 181 NENRAEEALELLRMMAN---DHGRSCPPNVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNG 237

Query: 224 INPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEAN 283
           + P       LIHG+   G W+EV  +  +M   G +P+  T+  +++ LC    ++E +
Sbjct: 238 VKPNNDTYNCLIHGYLSIGKWKEVVQMLEKMSARGLKPDCYTYGSLLNYLC---ALSEMH 294

Query: 284 GLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGY 343
             L+LM++ GL+PD   +N     Y   G ID A +IF  M   G    VV+Y  LI+  
Sbjct: 295 SFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDAL 354

Query: 344 CKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDL 403
           CK+  V++A   + Q+I+ GV   ++ +N+L+ GL    +   A++L  EM    + P+ 
Sbjct: 355 CKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNA 414

Query: 404 STYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHK 463
             +N LI  LC    V E  +L  ++E          +  LI G C AGR D A ++F  
Sbjct: 415 VFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLAGRTDEAEKVFDG 474

Query: 464 LPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNK 523
           +   GL PT VTY+ ++HG C   +++ A      M + G  P VVT+NT++HG  Q  +
Sbjct: 475 MVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKR 534

Query: 524 TSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAK 557
            S+  EL   M         D  T++I+++ L K
Sbjct: 535 FSEAKELYLNMINSGTKC--DIYTYNIILNGLCK 566



 Score =  109 bits (272), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 74/261 (28%), Positives = 126/261 (48%), Gaps = 15/261 (5%)

Query: 58  EARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILI 117
           E R     M H+   P   S+  L          D     +  +VSIGL P  +T N L+
Sbjct: 432 EGRRLIDLMEHVGVRPDAFSYTPLISGYCLAGRTDEAEKVFDGMVSIGLSPTEVTYNTLL 491

Query: 118 NCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKK 177
           +       G C  +RI +A  LF+ M+  GV P V+TY T+++G  +T   S A  L+  
Sbjct: 492 H-------GYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLN 544

Query: 178 MVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHG 237
           M++        +K +I++Y+II++ LCK   VD+A ++F  +  +G+   ++  T +I  
Sbjct: 545 MINSG------TKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGA 598

Query: 238 FCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPD 297
               G  E+   LF  +   G  PN++T+ ++ + L + G + E + L   M + G  P+
Sbjct: 599 LLKGGRKEDAMDLFAAIPANGLVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPN 658

Query: 298 RFTYNSLMDGYCLVGRIDTAR 318
               N+L+    L+ R D +R
Sbjct: 659 SQMLNALVRR--LLHRGDISR 677



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 37/148 (25%), Positives = 65/148 (43%), Gaps = 40/148 (27%)

Query: 460 LFHKLPQK---GLVPTVVTYSIMIHGLCRKGKLE--------------KANDFLL----- 497
           LF+++ ++    + P   TYSI+I  LCR G+L+              + ND ++     
Sbjct: 82  LFNRMVRECSIKVAPNTCTYSILIGCLCRMGRLKHSFATFGLILKTGWRVNDIVINQLLK 141

Query: 498 -----------------YMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPE-R 539
                             M + GC P+ V+++ L+ GF   N+  + +ELL  MA    R
Sbjct: 142 GLCDGKRVGEAMDVLLQRMPELGCTPDTVSYSILLKGFCNENRAEEALELLRMMANDHGR 201

Query: 540 NLVPDDTTFSIVVDLLAKDEKYHECSAV 567
           +  P+  T++ V+D L K + +     V
Sbjct: 202 SCPPNVVTYTTVIDGLCKAQLFDRAEGV 229


>gi|22128712|gb|AAM92824.1| putative chloroplast RNA processing protein [Oryza sativa Japonica
           Group]
          Length = 878

 Score =  305 bits (780), Expect = 6e-80,   Method: Compositional matrix adjust.
 Identities = 169/510 (33%), Positives = 269/510 (52%), Gaps = 21/510 (4%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPS---PPISSFNLLFGAVAKNRHYDAVISFY 98
           N  LH  C SG     + +   G +  M+     P + +++ L   + KN         +
Sbjct: 275 NSILHGYCSSG-----QPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIF 329

Query: 99  RKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTL 158
             +   GL PD  T   L+       +G   +  + E   L   M+  G++PD   +  L
Sbjct: 330 DSMTKRGLEPDIATYRTLL-------QGYATKGALVEMHALLDLMVRNGIQPDHHVFNIL 382

Query: 159 INGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLE 218
           I  + +   +  A+ +  KM     ++GL    N+  Y  +ID LCK G VD A   F +
Sbjct: 383 ICAYAKQEKVDQAMLVFSKM----RQHGL--NPNVVCYGTVIDVLCKSGSVDDAMLYFEQ 436

Query: 219 MKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGK 278
           M   G+ P ++V T+LIHG C    W++   L +EMLD G   N + FN +ID  CK G+
Sbjct: 437 MIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGR 496

Query: 279 INEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNI 338
           + E+  L +LM++ G+ PD  TYN+L+DG CL G++D A ++  SM S G K  +V+Y  
Sbjct: 497 VIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGT 556

Query: 339 LINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYN 398
           LINGYC++  +++A++L+++++S+GV   +ITYN +L GLF   +   A++L+  +    
Sbjct: 557 LINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSG 616

Query: 399 VEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAW 458
            + +LSTYNI++ GLCKNN   EA+++F  L +   +     FN +I  L K GR+D A 
Sbjct: 617 TQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAK 676

Query: 459 ELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGF 518
           +LF      GLVP V TYS+M   L  +G LE+ +D  L ME+NGC+ +    N+++   
Sbjct: 677 DLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKL 736

Query: 519 LQNNKTSKVVELLHKMAEPERNLVPDDTTF 548
           LQ    ++    L  + E   +L     +F
Sbjct: 737 LQRGDITRAGTYLFMIDEKHFSLEASTASF 766



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 144/502 (28%), Positives = 239/502 (47%), Gaps = 21/502 (4%)

Query: 58  EARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIG---LLPDFLTLN 114
           +AR+ F  +        I   N     VA++    A +S Y ++   G   + P   T  
Sbjct: 38  DARHVFDELLRRGRGASIYGLNRALADVARHSPA-AAVSRYNRMARAGAGKVTPTVHTYA 96

Query: 115 ILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRL 174
           ILI C        C   R+        N++  G R D IT+  L+ G C     S A+ +
Sbjct: 97  ILIGC-------CCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDI 149

Query: 175 HKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEM---KGRGINPAVVVC 231
             + ++   E G I   ++FSY+ ++  LC E    +A EL   M   +G G  P VV  
Sbjct: 150 VLRRMT---ELGCIP--DVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSY 204

Query: 232 TTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQ 291
            T+++GF   G+ ++    + EMLD G  P+++T++ +I  LCK   +++A  +L  M++
Sbjct: 205 NTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVK 264

Query: 292 RGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEE 351
            G+ PD  TYNS++ GYC  G+   A      M S G +  VV+Y+ L+N  CK     E
Sbjct: 265 NGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTE 324

Query: 352 AMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILID 411
           A  ++  +   G+   + TY TLL G    G       L D M    ++PD   +NILI 
Sbjct: 325 ARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILIC 384

Query: 412 GLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVP 471
              K   V +A+ +F  +  +     +  +  +ID LCK+G +D+A   F ++  +GL P
Sbjct: 385 AYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTP 444

Query: 472 TVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELL 531
            ++ Y+ +IHGLC   K +KA + +L M   G   N + FN+++    +  +  +  +L 
Sbjct: 445 NIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLF 504

Query: 532 HKMAEPERNLVPDDTTFSIVVD 553
             M      + PD  T++ ++D
Sbjct: 505 DLMVRI--GVKPDIITYNTLID 524


>gi|262316879|emb|CAZ44328.1| restoring pentatricopeptide repeat protein homologue [Raphanus
           sativus]
          Length = 681

 Score =  305 bits (780), Expect = 7e-80,   Method: Compositional matrix adjust.
 Identities = 185/590 (31%), Positives = 283/590 (47%), Gaps = 80/590 (13%)

Query: 32  AAVSSPETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHY 91
           A       +L    HE     I  L +A   F  M   +P P +  FN L G V +    
Sbjct: 39  AGFRGESLKLRSGFHE-----IKGLEDAIDLFSDMVRSRPLPSVIDFNKLMGVVVRMERP 93

Query: 92  DAVISFYRKLVSIGLLPDFLTLNILINCFGNKER-------------------------- 125
           D VIS Y+K+    +  D  + NILI CF +  +                          
Sbjct: 94  DLVISLYQKMERKQIPCDVYSFNILIKCFCSCSKLPFALSTFGKITKLGFQPDVVTFSTL 153

Query: 126 --GLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDY 183
             GLCVE+R+ EA  LF  M     RP+V+T+ TL+NG CR G +  A+ L  +MV    
Sbjct: 154 LHGLCVEDRVSEALDLFHQM----CRPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGL 209

Query: 184 ENGLIS------------------------------KTNIFSYSIIIDSLCKEGLVDKAK 213
           +   I+                              K N+  YS IID L K+G    A 
Sbjct: 210 QPNQITYGTIVDGMCKIGDTVSALNLLRKMEEMSHIKPNVVIYSAIIDGLWKDGRHSDAH 269

Query: 214 ELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCL 273
            L+ EM+ +GI P +     +I GFC +G W E   L  EML+    PN++T++ +I+  
Sbjct: 270 NLYTEMQEKGIFPDLFTYNCMIDGFCSSGRWSEAQRLLQEMLERKINPNVVTYSALINAY 329

Query: 274 CKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTV 333
            K  K  EA  L + M+ RG+ P+  TYNS++DG+C   R+D A  +F  M +KGC   V
Sbjct: 330 VKERKFFEAEELYDEMLPRGIIPNTITYNSMIDGFCKQNRLDAAEHMFYVMATKGCSPDV 389

Query: 334 VSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDE 393
            ++N LI+GYC    +++   L  ++   G+     TYNTL+ G    G    A  L  +
Sbjct: 390 FTFNTLIDGYCGAKRIDDGTELLHEMTETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQ 449

Query: 394 MKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEF-----------GIEIFN 442
           M    V PD+ T N L+DGLC N  +++A+++F  ++ +K +             ++ +N
Sbjct: 450 MISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASRPFNGVEPDVQTYN 509

Query: 443 CLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKN 502
            LI GL   G+   A EL+ ++P +G+VP  +TYS MI+GLC++ +L++A      M   
Sbjct: 510 ILISGLINEGKFLEAEELYKEMPHRGIVPNTITYSSMINGLCKQSRLDEATQMFDSMGSK 569

Query: 503 GCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVV 552
             +P+VVTFNTL+ G+ +  +    +EL  +M    R +V D  T+  ++
Sbjct: 570 SFSPDVVTFNTLVSGYCKAGRVDDGLELFCEMG--RRGIVADAITYITLI 617



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 121/401 (30%), Positives = 199/401 (49%), Gaps = 27/401 (6%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           C SG    +EA+     M   + +P + +++ L  A  K R +      Y +++  G++P
Sbjct: 295 CSSG--RWSEAQRLLQEMLERKINPNVVTYSALINAYVKERKFFEAEELYDEMLPRGIIP 352

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           + +T N +I+       G C +NR+  A  +F  M   G  PDV T+ TLI+G+C    +
Sbjct: 353 NTITYNSMID-------GFCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRI 405

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
                L  +M     E GL++ T   +Y+ +I   C  G ++ A +L  +M   G+ P +
Sbjct: 406 DDGTELLHEMT----ETGLVADTT--TYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDI 459

Query: 229 VVCTTLIHGFCCAGNWEEVNGLFIEM----LDL-------GPRPNLLTFNVMIDCLCKGG 277
           V C TL+ G C  G  ++   +F  M    +DL       G  P++ T+N++I  L   G
Sbjct: 460 VTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASRPFNGVEPDVQTYNILISGLINEG 519

Query: 278 KINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYN 337
           K  EA  L + M  RG+ P+  TY+S+++G C   R+D A ++F SM SK     VV++N
Sbjct: 520 KFLEAEELYKEMPHRGIVPNTITYSSMINGLCKQSRLDEATQMFDSMGSKSFSPDVVTFN 579

Query: 338 ILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLY 397
            L++GYCK   V++ + L+ ++   G+    ITY TL+ G  + G    A  +F EM   
Sbjct: 580 TLVSGYCKAGRVDDGLELFCEMGRRGIVADAITYITLIHGFRKVGNINGALDIFQEMISS 639

Query: 398 NVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMN-KFEFG 437
            V PD  T   ++  L     ++ AV +   L+M+    FG
Sbjct: 640 GVYPDTITIRSMLTVLWSKEELKRAVAMLEDLQMSMDLSFG 680



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 92/328 (28%), Positives = 172/328 (52%), Gaps = 7/328 (2%)

Query: 234 LIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRG 293
           L  GF      E+   LF +M+   P P+++ FN ++  + +  + +    L + M ++ 
Sbjct: 48  LRSGFHEIKGLEDAIDLFSDMVRSRPLPSVIDFNKLMGVVVRMERPDLVISLYQKMERKQ 107

Query: 294 LNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAM 353
           +  D +++N L+  +C   ++  A   F  +   G +  VV+++ L++G C    V EA+
Sbjct: 108 IPCDVYSFNILIKCFCSCSKLPFALSTFGKITKLGFQPDVVTFSTLLHGLCVEDRVSEAL 167

Query: 354 SLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGL 413
            L+ Q+     R  V+T+ TL++GL + G+   A  L D M    ++P+  TY  ++DG+
Sbjct: 168 DLFHQM----CRPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGM 223

Query: 414 CKNNCVQEAVKLFH-MLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPT 472
           CK      A+ L   M EM+  +  + I++ +IDGL K GR  +A  L+ ++ +KG+ P 
Sbjct: 224 CKIGDTVSALNLLRKMEEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPD 283

Query: 473 VVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLH 532
           + TY+ MI G C  G+  +A   L  M +    PNVVT++ L++ +++  K  +  EL  
Sbjct: 284 LFTYNCMIDGFCSSGRWSEAQRLLQEMLERKINPNVVTYSALINAYVKERKFFEAEELYD 343

Query: 533 KMAEPERNLVPDDTTFSIVVDLLAKDEK 560
           +M    R ++P+  T++ ++D   K  +
Sbjct: 344 EML--PRGIIPNTITYNSMIDGFCKQNR 369



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 81/286 (28%), Positives = 142/286 (49%), Gaps = 7/286 (2%)

Query: 279 INEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNI 338
           + +A  L   M++    P    +N LM     + R D    ++  M  K     V S+NI
Sbjct: 58  LEDAIDLFSDMVRSRPLPSVIDFNKLMGVVVRMERPDLVISLYQKMERKQIPCDVYSFNI 117

Query: 339 LINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYN 398
           LI  +C    +  A+S + +I   G +  V+T++TLL GL    +   A  LF +M    
Sbjct: 118 LIKCFCSCSKLPFALSTFGKITKLGFQPDVVTFSTLLHGLCVEDRVSEALDLFHQM---- 173

Query: 399 VEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAW 458
             P++ T+  L++GLC+   V EAV L   +  +  +     +  ++DG+CK G   +A 
Sbjct: 174 CRPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKIGDTVSAL 233

Query: 459 ELFHKLPQKGLV-PTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHG 517
            L  K+ +   + P VV YS +I GL + G+   A++    M++ G  P++ T+N ++ G
Sbjct: 234 NLLRKMEEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCMIDG 293

Query: 518 FLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
           F  + + S+   LL +M   ER + P+  T+S +++   K+ K+ E
Sbjct: 294 FCSSGRWSEAQRLLQEML--ERKINPNVVTYSALINAYVKERKFFE 337



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 61/225 (27%), Positives = 123/225 (54%), Gaps = 5/225 (2%)

Query: 339 LINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYN 398
           L +G+ +I  +E+A+ L+  ++ +    +VI +N L+  + +  +      L+ +M+   
Sbjct: 48  LRSGFHEIKGLEDAIDLFSDMVRSRPLPSVIDFNKLMGVVVRMERPDLVISLYQKMERKQ 107

Query: 399 VEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAW 458
           +  D+ ++NILI   C  + +  A+  F  +    F+  +  F+ L+ GLC   R+  A 
Sbjct: 108 IPCDVYSFNILIKCFCSCSKLPFALSTFGKITKLGFQPDVVTFSTLLHGLCVEDRVSEAL 167

Query: 459 ELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGF 518
           +LFH++ +    P VVT++ +++GLCR+G++ +A   L  M ++G  PN +T+ T++ G 
Sbjct: 168 DLFHQMCR----PNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGM 223

Query: 519 LQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
            +   T   + LL KM E   ++ P+   +S ++D L KD ++ +
Sbjct: 224 CKIGDTVSALNLLRKMEEMS-HIKPNVVIYSAIIDGLWKDGRHSD 267



 Score =  102 bits (253), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 64/261 (24%), Positives = 129/261 (49%), Gaps = 7/261 (2%)

Query: 304 LMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNG 363
           L  G+  +  ++ A ++F  M       +V+ +N L+    ++   +  +SLY+++    
Sbjct: 48  LRSGFHEIKGLEDAIDLFSDMVRSRPLPSVIDFNKLMGVVVRMERPDLVISLYQKMERKQ 107

Query: 364 VRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAV 423
           +   V ++N L+       +  +A   F ++     +PD+ T++ L+ GLC  + V EA+
Sbjct: 108 IPCDVYSFNILIKCFCSCSKLPFALSTFGKITKLGFQPDVVTFSTLLHGLCVEDRVSEAL 167

Query: 424 KLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGL 483
            LFH +        +  F  L++GLC+ GR+  A  L  ++ + GL P  +TY  ++ G+
Sbjct: 168 DLFHQM----CRPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGM 223

Query: 484 CRKGKLEKANDFLLYMEK-NGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLV 542
           C+ G    A + L  ME+ +   PNVV ++ ++ G  ++ + S    L  +M   E+ + 
Sbjct: 224 CKIGDTVSALNLLRKMEEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQ--EKGIF 281

Query: 543 PDDTTFSIVVDLLAKDEKYHE 563
           PD  T++ ++D      ++ E
Sbjct: 282 PDLFTYNCMIDGFCSSGRWSE 302


>gi|302809105|ref|XP_002986246.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
 gi|300146105|gb|EFJ12777.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
          Length = 725

 Score =  304 bits (779), Expect = 7e-80,   Method: Compositional matrix adjust.
 Identities = 194/615 (31%), Positives = 303/615 (49%), Gaps = 78/615 (12%)

Query: 29  RQIAAVSSPET-QLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAK 87
           R+++    P++   N  ++   KS    L++A      M     +P + S+N +     K
Sbjct: 34  REMSKTCPPDSVTYNTMINGLSKSD--RLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCK 91

Query: 88  NRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFG 147
               +  +    ++V  G  PD ++   +IN       GLC  +++ EA  +   MI  G
Sbjct: 92  ANRVENALWLLEQMVMRGCPPDVVSYTTVIN-------GLCKLDQVDEACRVMDKMIQRG 144

Query: 148 VRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNI-------------- 193
            +P+VITYGTL++GFCR G+L  A+ L +KM    Y    I+  NI              
Sbjct: 145 CQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHGLCSGRKLDSAL 204

Query: 194 ----------------FSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHG 237
                           F+YS I+DSL K G VD A  L   M  +G +P VV  ++L+HG
Sbjct: 205 QLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYSSLLHG 264

Query: 238 FCCAGNWEEVNGLFI-----------------------------------EMLDLGPRPN 262
            C AG  +E   L                                     EM+D G +PN
Sbjct: 265 LCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPN 324

Query: 263 LLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFL 322
           ++T+ V++D  CK GK  +A GL+E+M+++G  P+ FTYNSL+D +C    ++ A ++  
Sbjct: 325 VVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLS 384

Query: 323 SMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAG 382
           SM  KGC   VVSYN +I G CK   V E + L  Q++SN     ++T+NT++  + +  
Sbjct: 385 SMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTY 444

Query: 383 QAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLF-HMLEMNKFEFGIEIF 441
           +   A +LF+ ++     P+L TYN L+ GLCK+    +A  L   M         I  +
Sbjct: 445 RVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITY 504

Query: 442 NCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEK 501
           N +IDGLCK+ R+D A++LF ++   GL P  VTYSI+I  LC+   +++AN+ L  M K
Sbjct: 505 NTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLK 564

Query: 502 NGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKY 561
           NG  P  +T+ TL+ GF +     K +E+L  +    +   PD  TFSI +D L+K  + 
Sbjct: 565 NGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLS--KGSYPDVVTFSIFIDWLSKRGRL 622

Query: 562 HECSAVSKSSYRACL 576
            +   + ++  RA L
Sbjct: 623 RQAGELLETMLRAGL 637



 Score =  278 bits (710), Expect = 8e-72,   Method: Compositional matrix adjust.
 Identities = 171/532 (32%), Positives = 273/532 (51%), Gaps = 20/532 (3%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPP-ISSFNLLFGAVAKNRHYDAVISFYRK 100
           N  +H  C      L+ A   F  M      PP + +++ +  ++ K+   D        
Sbjct: 188 NNIMHGLCSGR--KLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEA 245

Query: 101 LVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLIN 160
           +VS G  P+ +T + L++       GLC   ++ EAT L + M   G  P+++TY T+I+
Sbjct: 246 MVSKGCSPNVVTYSSLLH-------GLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIID 298

Query: 161 GFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMK 220
           G C+ G +  A  L ++MV G        + N+ +Y++++D+ CK G  + A  L   M 
Sbjct: 299 GHCKLGRIDEAYHLLEEMVDGG------CQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMV 352

Query: 221 GRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKIN 280
            +G  P +    +L+  FC     E    L   M+  G  PN++++N +I  LCK  K++
Sbjct: 353 EKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVH 412

Query: 281 EANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILI 340
           E   LLE M+     PD  T+N+++D  C   R+D A E+F  +   GC   +V+YN L+
Sbjct: 413 EGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLV 472

Query: 341 NGYCKILNVEEAMSLYRQII-SNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNV 399
           +G CK    ++A  L R++    G    +ITYNT++ GL ++ +   A KLF +M    +
Sbjct: 473 HGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGL 532

Query: 400 EPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWE 459
            PD  TY+I+I  LCK   + EA  +  ++  N F+ G   +  LIDG CK G LD A E
Sbjct: 533 APDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALE 592

Query: 460 LFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFL 519
           +   L  KG  P VVT+SI I  L ++G+L +A + L  M + G  P+ VT+NTL+ GF 
Sbjct: 593 ILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFC 652

Query: 520 QNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSA-VSKS 570
             ++T   V+L   M +      PD+ T++ +V  L   + Y +  A VSKS
Sbjct: 653 DASRTEDAVDLFEVMRQC--GCEPDNATYTTLVGHLVDKKSYKDLLAEVSKS 702



 Score =  265 bits (677), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 163/545 (29%), Positives = 269/545 (49%), Gaps = 77/545 (14%)

Query: 79  NLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATW 138
           ++L G     +  DAV+ F  + +S    PD +T N +IN       GL   +R+ +A  
Sbjct: 15  SILRGLCDAGQCSDAVLHF--REMSKTCPPDSVTYNTMIN-------GLSKSDRLDDAIR 65

Query: 139 LFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKT------- 191
           L + M+  G  P+V +Y T+++GFC+   +  AL L ++MV       ++S T       
Sbjct: 66  LLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPDVVSYTTVINGLC 125

Query: 192 ----------------------NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVV 229
                                 N+ +Y  ++D  C+ G +D A EL  +M  RG  P  +
Sbjct: 126 KLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAI 185

Query: 230 VCTTLIHGFCCAGNWEEVNGLFIEMLDLGP-RPNLLTFNVMIDCLCKGGKINEANGLLEL 288
               ++HG C     +    LF EM + G   P++ T++ ++D L K GK+++A  L+E 
Sbjct: 186 TYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEA 245

Query: 289 MIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILN 348
           M+ +G +P+  TY+SL+ G C  G++D A  +   M   GC   +V+YN +I+G+CK+  
Sbjct: 246 MVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGR 305

Query: 349 VEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQA-------------GYAQKLFDEMK 395
           ++EA  L  +++  G +  V+TY  LL    + G+A             GY   LF    
Sbjct: 306 IDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNS 365

Query: 396 LYN-------VE---------------PDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNK 433
           L +       VE               P++ +YN +I GLCK   V E V L   +  N 
Sbjct: 366 LLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNN 425

Query: 434 FEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKAN 493
               I  FN +ID +CK  R+D A+ELF+ + + G  P +VTY+ ++HGLC+  + ++A 
Sbjct: 426 CVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAE 485

Query: 494 DFLLYM-EKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVV 552
             L  M  K GC+P+++T+NT++ G  ++ +  +  +L  +M      L PDD T+SIV+
Sbjct: 486 YLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSD--GLAPDDVTYSIVI 543

Query: 553 DLLAK 557
             L K
Sbjct: 544 SSLCK 548



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 127/421 (30%), Positives = 224/421 (53%), Gaps = 16/421 (3%)

Query: 147 GVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKT---NIFSYSIIIDSL 203
           G++     + +++ G C  G  S A+   ++M          SKT   +  +Y+ +I+ L
Sbjct: 5   GLKAHAGVHKSILRGLCDAGQCSDAVLHFREM----------SKTCPPDSVTYNTMINGL 54

Query: 204 CKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNL 263
            K   +D A  L  EM   G  P V    T++HGFC A   E    L  +M+  G  P++
Sbjct: 55  SKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPDV 114

Query: 264 LTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLS 323
           +++  +I+ LCK  +++EA  +++ MIQRG  P+  TY +L+DG+C VG +D A E+   
Sbjct: 115 VSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRK 174

Query: 324 MHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNG-VRQTVITYNTLLSGLFQAG 382
           M  +G +   ++YN +++G C    ++ A+ L++++  +G     V TY+T++  L ++G
Sbjct: 175 MTERGYRPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSG 234

Query: 383 QAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFN 442
           +   A +L + M      P++ TY+ L+ GLCK   + EA  L   +  +     I  +N
Sbjct: 235 KVDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYN 294

Query: 443 CLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKN 502
            +IDG CK GR+D A+ L  ++   G  P VVTY++++   C+ GK E A   +  M + 
Sbjct: 295 TIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEK 354

Query: 503 GCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYH 562
           G  PN+ T+N+L+  F + ++  +  +LL  M   ++  VP+  +++ V+  L K  K H
Sbjct: 355 GYVPNLFTYNSLLDMFCKKDEVERACQLLSSMI--QKGCVPNVVSYNTVIAGLCKATKVH 412

Query: 563 E 563
           E
Sbjct: 413 E 413



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 113/340 (33%), Positives = 188/340 (55%), Gaps = 4/340 (1%)

Query: 219 MKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGK 278
           M  +G+     V  +++ G C AG   +    F EM    P P+ +T+N MI+ L K  +
Sbjct: 1   MNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREMSKTCP-PDSVTYNTMINGLSKSDR 59

Query: 279 INEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNI 338
           +++A  LLE M+  G  P+ F+YN+++ G+C   R++ A  +   M  +GC   VVSY  
Sbjct: 60  LDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPDVVSYTT 119

Query: 339 LINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYN 398
           +ING CK+  V+EA  +  ++I  G +  VITY TL+ G  + G    A +L  +M    
Sbjct: 120 VINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERG 179

Query: 399 VEPDLSTYNILIDGLCKNNCVQEAVKLF-HMLEMNKFEFGIEIFNCLIDGLCKAGRLDNA 457
             P+  TYN ++ GLC    +  A++LF  M E       +  ++ ++D L K+G++D+A
Sbjct: 180 YRPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDA 239

Query: 458 WELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHG 517
             L   +  KG  P VVTYS ++HGLC+ GKL++A   L  M ++GC+PN+VT+NT++ G
Sbjct: 240 CRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDG 299

Query: 518 FLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAK 557
             +  +  +   LL +M +      P+  T+++++D   K
Sbjct: 300 HCKLGRIDEAYHLLEEMVDG--GCQPNVVTYTVLLDAFCK 337



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 87/287 (30%), Positives = 150/287 (52%), Gaps = 4/287 (1%)

Query: 289 MIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILN 348
           M ++GL      + S++ G C  G+   A   F  M SK C    V+YN +ING  K   
Sbjct: 1   MNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREM-SKTCPPDSVTYNTMINGLSKSDR 59

Query: 349 VEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNI 408
           +++A+ L  +++ NG    V +YNT+L G  +A +   A  L ++M +    PD+ +Y  
Sbjct: 60  LDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPDVVSYTT 119

Query: 409 LIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKG 468
           +I+GLCK + V EA ++   +     +  +  +  L+DG C+ G LD A EL  K+ ++G
Sbjct: 120 VINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERG 179

Query: 469 LVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNG-CAPNVVTFNTLMHGFLQNNKTSKV 527
             P  +TY+ ++HGLC   KL+ A      ME++G C P+V T++T++   +++ K    
Sbjct: 180 YRPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDA 239

Query: 528 VELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKSSYRA 574
             L+  M    +   P+  T+S ++  L K  K  E +A+ +   R+
Sbjct: 240 CRLVEAMV--SKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRS 284


>gi|186510147|ref|NP_188293.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75274280|sp|Q9LUR2.1|PP238_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g16710, mitochondrial; Flags: Precursor
 gi|11994626|dbj|BAB02763.1| unnamed protein product [Arabidopsis thaliana]
 gi|332642334|gb|AEE75855.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 507

 Score =  303 bits (775), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 162/477 (33%), Positives = 257/477 (53%), Gaps = 19/477 (3%)

Query: 31  IAAVSSPETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRH 90
           I A SS    L   LH       +  N+A   F  M H +P P I  F  L   +AK   
Sbjct: 45  IRAFSSYRKILRNGLHN------LQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNR 98

Query: 91  YDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRP 150
           YD VIS + ++  +G+ P   T NI+++C       +C+ ++   A+     M+  G  P
Sbjct: 99  YDVVISLFEQMQILGIPPLLCTCNIVMHC-------VCLSSQPCRASCFLGKMMKLGFEP 151

Query: 151 DVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVD 210
           D++T+ +L+NG+C    +  A+ L  +++      G+  K N+ +Y+ +I  LCK   ++
Sbjct: 152 DLVTFTSLLNGYCHWNRIEDAIALFDQIL------GMGFKPNVVTYTTLIRCLCKNRHLN 205

Query: 211 KAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMI 270
            A ELF +M   G  P VV    L+ G C  G W +   L  +M+     PN++TF  +I
Sbjct: 206 HAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALI 265

Query: 271 DCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCK 330
           D   K GK+ EA  L  +MIQ  + PD FTY SL++G C+ G +D AR++F  M   GC 
Sbjct: 266 DAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCY 325

Query: 331 HTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKL 390
              V Y  LI+G+CK   VE+ M ++ ++   GV    ITY  L+ G    G+   AQ++
Sbjct: 326 PNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEV 385

Query: 391 FDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCK 450
           F++M      PD+ TYN+L+DGLC N  V++A+ +F  +   + +  I  +  +I G+CK
Sbjct: 386 FNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCK 445

Query: 451 AGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPN 507
            G++++A++LF  L  KG+ P V+TY+ MI G CR+G + +A+     M+++G  PN
Sbjct: 446 LGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPN 502



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 106/383 (27%), Positives = 197/383 (51%), Gaps = 7/383 (1%)

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
           +I  ++ ++  + K    D    LF +M+  GI P +  C  ++H  C +      +   
Sbjct: 82  SIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFL 141

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
            +M+ LG  P+L+TF  +++  C   +I +A  L + ++  G  P+  TY +L+   C  
Sbjct: 142 GKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKN 201

Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
             ++ A E+F  M + G +  VV+YN L+ G C+I    +A  L R ++   +   VIT+
Sbjct: 202 RHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITF 261

Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
             L+    + G+   A++L++ M   +V PD+ TY  LI+GLC    + EA ++F+++E 
Sbjct: 262 TALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMER 321

Query: 432 NKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEK 491
           N       I+  LI G CK+ R+++  ++F+++ QKG+V   +TY+++I G C  G+ + 
Sbjct: 322 NGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDV 381

Query: 492 ANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIV 551
           A +    M      P++ T+N L+ G   N K  K + +   M + E ++  +  T++I+
Sbjct: 382 AQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDI--NIVTYTII 439

Query: 552 VDLLAKDEKYHE-----CSAVSK 569
           +  + K  K  +     CS  SK
Sbjct: 440 IQGMCKLGKVEDAFDLFCSLFSK 462


>gi|262316881|emb|CAZ44330.1| homologue to restoring pentatricopeptide repeat protein [Raphanus
           sativus]
          Length = 686

 Score =  303 bits (775), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 194/629 (30%), Positives = 309/629 (49%), Gaps = 85/629 (13%)

Query: 1   MASRTQFRCLFSSETVSKVKLSSLFKSPRQIAAVSSPETQLNE--FLHENCK--SG---I 53
           M +R +    +SS  VS  +L    +S R   A  S + + +E  F  E+ K  SG   I
Sbjct: 1   MLARVRRSGSYSSPAVSAARLFCT-RSIRDTLAKKSRDGESDEAGFGGESLKLQSGFHEI 59

Query: 54  INLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL------------ 101
             L++A   FGYM   +P P +  F  L G V +    D VIS ++K+            
Sbjct: 60  KGLDDAIDLFGYMVRSRPLPSVIDFCKLMGVVVRMGRPDVVISLHKKMEMLRMPCNAYSF 119

Query: 102 -----------------------VSIGLLPDFLTLNILINCFGNKER------------- 125
                                    +G  P  +T N L++    ++R             
Sbjct: 120 TILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFNTLLHGLCVEDRISEALDLFHQMCK 179

Query: 126 -----------GLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRL 174
                      GLC E R+ EA  L   M+  G++P+ ITYGT+++G C+ G+   AL L
Sbjct: 180 PNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNL 239

Query: 175 HKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTL 234
            +KM    +   +I   N+  Y+ IID L K+G    A  LF+EM+ + I P +V    +
Sbjct: 240 LRKMEEVSH---IIP--NVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNCM 294

Query: 235 IHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGL 294
           I+GFC +G W +   L  EML+    P+++TF+ +I+   K GK  EA  L + M+ R +
Sbjct: 295 INGFCISGRWSDAEQLLQEMLERKINPDVVTFSALINAFVKEGKFFEAEELYDEMLPRSI 354

Query: 295 NPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMS 354
            P   TY+S++DG+C   R+D A  +F    +KGC   ++++N LI GYC+   V++ + 
Sbjct: 355 IPSTVTYSSMIDGFCKQNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIK 414

Query: 355 LYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLC 414
           L  ++   G+    ITY TL+ G  Q G    AQ L  EM    V P++ T N L+DGLC
Sbjct: 415 LLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLC 474

Query: 415 KNNCVQEAVKLFHMLEMNKF-----------EFGIEIFNCLIDGLCKAGRLDNAWELFHK 463
            N  +++A+++F  ++ +K            E  ++ +N LI GL   G+   A EL+ +
Sbjct: 475 DNGKLKDALEMFKAMQKSKMDIDASRPFNGVEPDVQTYNILICGLINEGKFLEAEELYEE 534

Query: 464 LPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNK 523
           +P +G+VP  +TYS MI GLC++ +L++A      M     +P+VVTFNTL+ G+ +   
Sbjct: 535 MPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLITGYCKAGM 594

Query: 524 TSKVVELLHKMAEPERNLVPDDTTFSIVV 552
               +EL  +M   +R +V D  T+  ++
Sbjct: 595 VDDGLELFCEMG--QRGIVADAITYITLI 621



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 121/395 (30%), Positives = 196/395 (49%), Gaps = 26/395 (6%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           C SG    ++A      M   + +P + +F+ L  A  K   +      Y +++   ++P
Sbjct: 299 CISG--RWSDAEQLLQEMLERKINPDVVTFSALINAFVKEGKFFEAEELYDEMLPRSIIP 356

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
             +T + +I+       G C +NR+  A  +F      G  PD+IT+ TLI G+CR   +
Sbjct: 357 STVTYSSMID-------GFCKQNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRV 409

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
              ++L  +M     E GL++  N  +Y+ +I   C+ G ++ A++L  EM   G+ P V
Sbjct: 410 DDGIKLLHEMT----EAGLVA--NTITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNV 463

Query: 229 VVCTTLIHGFCCAGNWEEVNGLFIEM----LDL-------GPRPNLLTFNVMIDCLCKGG 277
           V C TL+ G C  G  ++   +F  M    +D+       G  P++ T+N++I  L   G
Sbjct: 464 VTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASRPFNGVEPDVQTYNILICGLINEG 523

Query: 278 KINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYN 337
           K  EA  L E M  RG+ PD  TY+S++DG C   R+D A ++F SM SK     VV++N
Sbjct: 524 KFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPDVVTFN 583

Query: 338 ILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLY 397
            LI GYCK   V++ + L+ ++   G+    ITY TL+ G  +      A  +F EM   
Sbjct: 584 TLITGYCKAGMVDDGLELFCEMGQRGIVADAITYITLIYGFRKVDNIDGALDIFQEMISS 643

Query: 398 NVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMN 432
            V PD  T   ++ GL     ++ AV +   L+M+
Sbjct: 644 GVYPDTITIRNMLTGLWSKEELERAVAMLEDLQMS 678



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 104/382 (27%), Positives = 186/382 (48%), Gaps = 17/382 (4%)

Query: 180 SGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFC 239
           SG Y +  +S   +F    I D+L K+    ++ E      G  +         L  GF 
Sbjct: 8   SGSYSSPAVSAARLFCTRSIRDTLAKKSRDGESDEAGF--GGESLK--------LQSGFH 57

Query: 240 CAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRF 299
                ++   LF  M+   P P+++ F  ++  + + G+ +    L + M    +  + +
Sbjct: 58  EIKGLDDAIDLFGYMVRSRPLPSVIDFCKLMGVVVRMGRPDVVISLHKKMEMLRMPCNAY 117

Query: 300 TYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQI 359
           ++  LM  +C   ++  A   F  +   G   TVV++N L++G C    + EA+ L+ Q+
Sbjct: 118 SFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFNTLLHGLCVEDRISEALDLFHQM 177

Query: 360 ISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCV 419
                +  V+T+ TL++GL + G+   A  L D M    ++P+  TY  ++DG+CK    
Sbjct: 178 ----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDT 233

Query: 420 QEAVKLFH-MLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSI 478
             A+ L   M E++     + I+N +IDGL K GR  +A  LF ++ +K + P +VTY+ 
Sbjct: 234 VSALNLLRKMEEVSHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNC 293

Query: 479 MIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPE 538
           MI+G C  G+   A   L  M +    P+VVTF+ L++ F++  K  +  EL  +M    
Sbjct: 294 MINGFCISGRWSDAEQLLQEMLERKINPDVVTFSALINAFVKEGKFFEAEELYDEML--P 351

Query: 539 RNLVPDDTTFSIVVDLLAKDEK 560
           R+++P   T+S ++D   K  +
Sbjct: 352 RSIIPSTVTYSSMIDGFCKQNR 373



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 80/286 (27%), Positives = 143/286 (50%), Gaps = 7/286 (2%)

Query: 279 INEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNI 338
           +++A  L   M++    P    +  LM     +GR D    +   M          S+ I
Sbjct: 62  LDDAIDLFGYMVRSRPLPSVIDFCKLMGVVVRMGRPDVVISLHKKMEMLRMPCNAYSFTI 121

Query: 339 LINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYN 398
           L+  +C    +  A+S + +I   G   TV+T+NTLL GL    +   A  LF +M    
Sbjct: 122 LMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFNTLLHGLCVEDRISEALDLFHQM---- 177

Query: 399 VEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAW 458
            +P++ T+  L++GLC+   V EAV L   +  +  +     +  ++DG+CK G   +A 
Sbjct: 178 CKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSAL 237

Query: 459 ELFHKLPQ-KGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHG 517
            L  K+ +   ++P VV Y+ +I GL + G+   A++  + M++    P++VT+N +++G
Sbjct: 238 NLLRKMEEVSHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNCMING 297

Query: 518 FLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
           F  + + S   +LL +M   ER + PD  TFS +++   K+ K+ E
Sbjct: 298 FCISGRWSDAEQLLQEML--ERKINPDVVTFSALINAFVKEGKFFE 341



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 57/225 (25%), Positives = 121/225 (53%), Gaps = 5/225 (2%)

Query: 339 LINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYN 398
           L +G+ +I  +++A+ L+  ++ +    +VI +  L+  + + G+      L  +M++  
Sbjct: 52  LQSGFHEIKGLDDAIDLFGYMVRSRPLPSVIDFCKLMGVVVRMGRPDVVISLHKKMEMLR 111

Query: 399 VEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAW 458
           +  +  ++ IL+   C  + +  A+  F  +    F   +  FN L+ GLC   R+  A 
Sbjct: 112 MPCNAYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFNTLLHGLCVEDRISEAL 171

Query: 459 ELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGF 518
           +LFH++ +    P VVT++ +++GLCR+G++ +A   L  M ++G  PN +T+ T++ G 
Sbjct: 172 DLFHQMCK----PNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGM 227

Query: 519 LQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
            +   T   + LL KM E   +++P+   ++ ++D L KD ++ +
Sbjct: 228 CKMGDTVSALNLLRKMEEVS-HIIPNVVIYNTIIDGLWKDGRHSD 271



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 39/149 (26%), Positives = 74/149 (49%), Gaps = 6/149 (4%)

Query: 419 VQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSI 478
           + +A+ LF  +  ++    +  F  L+  + + GR D    L  K+    +     +++I
Sbjct: 62  LDDAIDLFGYMVRSRPLPSVIDFCKLMGVVVRMGRPDVVISLHKKMEMLRMPCNAYSFTI 121

Query: 479 MIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPE 538
           ++   C   KL  A      + K G  P VVTFNTL+HG    ++ S+ ++L H+M +P 
Sbjct: 122 LMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFNTLLHGLCVEDRISEALDLFHQMCKP- 180

Query: 539 RNLVPDDTTFSIVVDLLAKDEKYHECSAV 567
            N+V    TF+ +++ L ++ +  E  A+
Sbjct: 181 -NVV----TFTTLMNGLCREGRVVEAVAL 204


>gi|296087921|emb|CBI35204.3| unnamed protein product [Vitis vinifera]
          Length = 543

 Score =  302 bits (773), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 171/497 (34%), Positives = 269/497 (54%), Gaps = 49/497 (9%)

Query: 63  FGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGN 122
           F  M  MQP P    FN L  ++AK +H+  ++S   ++ S G+ P+  TL+ILIN F +
Sbjct: 49  FNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCH 108

Query: 123 KERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGD 182
             RG     +I EA  LF  MI  G RPDV+TYGTLING C+ GN S A+RL   MV  +
Sbjct: 109 LNRG-----KIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKN 163

Query: 183 YENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAG 242
                  + N+F+Y+ IIDSLCK+  V +A  LF EM  +GI+P +    +LIH  C   
Sbjct: 164 ------CQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLC 217

Query: 243 NWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQR-GLNPDRFTY 301
            W+ V  L  EM+D    P++++FN ++D LCK GK+ EA+ +++ MIQR G  P+  +Y
Sbjct: 218 EWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGGCMPNVISY 277

Query: 302 NSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIIS 361
           N+L++GYC + RID A  +F  M  +      V+Y+ LI+G C +  +++A++L+ ++++
Sbjct: 278 NTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVA 337

Query: 362 NGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQE 421
                 ++TY  LL  L +      A  L   ++  N++PD+   NI IDG+C+   ++ 
Sbjct: 338 CSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEA 397

Query: 422 AVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIH 481
           A  LF  L     +  +  ++ +I+GLC+ G LD A +LF ++ + G             
Sbjct: 398 ARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENG------------- 444

Query: 482 GLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNL 541
                                 C  N   +NT+  GFL+NN+TS+ ++LL +M    R  
Sbjct: 445 ----------------------CTLNGCIYNTITRGFLRNNETSRAIQLLQEMV--ARGF 480

Query: 542 VPDDTTFSIVVDLLAKD 558
             D +T ++ V +L+ D
Sbjct: 481 SADASTMTLFVKMLSDD 497



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 84/284 (29%), Positives = 146/284 (51%), Gaps = 12/284 (4%)

Query: 296 PDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKIL--NVEEAM 353
           P    +N L+     +    T   +   M S G    + + +ILIN +C +    + EA+
Sbjct: 59  PSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRGKIGEAL 118

Query: 354 SLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGL 413
            L+ ++I  G R  V+TY TL++GL + G    A +L   M   N +P++  YN +ID L
Sbjct: 119 HLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSL 178

Query: 414 CKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTV 473
           CK+  V EA  LF  +        I  +N LI  LC      +   L +++    ++P V
Sbjct: 179 CKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDV 238

Query: 474 VTYSIMIHGLCRKGKLEKANDFLLYM-EKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLH 532
           V+++ ++  LC++GK+ +A+D +  M ++ GC PNV+++NTL++G+ +  +  K + L  
Sbjct: 239 VSFNTVVDALCKEGKVTEAHDVVDKMIQRGGCMPNVISYNTLINGYCKIQRIDKAMYLFG 298

Query: 533 KMAEPERNLVPDDTTFSIVVDLLAKDEK-------YHECSAVSK 569
           +M   E  L+PD  T+S ++  L   E+       +HE  A S+
Sbjct: 299 EMCRQE--LIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQ 340



 Score = 95.5 bits (236), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 59/221 (26%), Positives = 109/221 (49%), Gaps = 4/221 (1%)

Query: 349 VEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNI 408
           ++ A+S + +++      + + +N LL+ + +         L  +M  + + P++ T +I
Sbjct: 42  IDGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHI 101

Query: 409 LIDGLCKNN--CVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQ 466
           LI+  C  N   + EA+ LF  +    F   +  +  LI+GLCK G    A  L   + Q
Sbjct: 102 LINSFCHLNRGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQ 161

Query: 467 KGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSK 526
           K   P V  Y+ +I  LC+  ++ +A +    M   G +P++ T+N+L+H      +   
Sbjct: 162 KNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKH 221

Query: 527 VVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAV 567
           V  LL++M + +  ++PD  +F+ VVD L K+ K  E   V
Sbjct: 222 VATLLNEMVDSK--IMPDVVSFNTVVDALCKEGKVTEAHDV 260


>gi|224133106|ref|XP_002327962.1| predicted protein [Populus trichocarpa]
 gi|222837371|gb|EEE75750.1| predicted protein [Populus trichocarpa]
          Length = 487

 Score =  301 bits (772), Expect = 5e-79,   Method: Compositional matrix adjust.
 Identities = 160/430 (37%), Positives = 250/430 (58%), Gaps = 34/430 (7%)

Query: 53  IINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLT 112
           + N+ +A + F +M H  P P I  F+ L  A+ + +HY  V+S  +++  + +  D   
Sbjct: 62  LTNIEDALFSFNHMIHKHPLPCIVEFDKLLSALVRIKHYGTVLSLSKRIELLRIERDVFH 121

Query: 113 LNILINCFGNKER----------------------------GLCVENRIKEATWLFKNMI 144
            NILINCF   +R                            GLC E++   A   F  M+
Sbjct: 122 FNILINCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDEMV 181

Query: 145 AFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLC 204
           A G +P++ TY T+I GFC+ G  +VA+ L KKM   D   G   + +I  Y+ IID LC
Sbjct: 182 ASGYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKM---DKAGG---RPDIVIYNTIIDGLC 235

Query: 205 KEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLL 264
           K+ LV +A ++F E+KG+G+ P V   + L+HG C +   EE + LF EM+ L   P+++
Sbjct: 236 KDRLVSEALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVV 295

Query: 265 TFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSM 324
           TFN+++D LCK G ++EA G++++MI++G+ P+  TYNSLM+GYCL  ++  AR +F +M
Sbjct: 296 TFNILVDKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAM 355

Query: 325 HSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQA 384
            +KGC   VVSYNILINGYCK   ++EA  L+ ++   G+      YNTL+SGL QAG+ 
Sbjct: 356 ITKGCMPNVVSYNILINGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQAGRH 415

Query: 385 GYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCL 444
             A++LF +M+     PDL T  IL+D LCK   +  A++LF  ++ +  +  +  ++ L
Sbjct: 416 CEARELFKDMQAQGCSPDLVTCTILLDSLCKLGYLDNALRLFRAMQDSCLKPNLVTYDIL 475

Query: 445 IDGLCKAGRL 454
           I  + K+G++
Sbjct: 476 IRAMYKSGKI 485



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 130/436 (29%), Positives = 219/436 (50%), Gaps = 8/436 (1%)

Query: 128 CVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGL 187
           C    I++A + F +MI     P ++ +  L++   R  +    L L K++        L
Sbjct: 60  CSLTNIEDALFSFNHMIHKHPLPCIVEFDKLLSALVRIKHYGTVLSLSKRI------ELL 113

Query: 188 ISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEV 247
             + ++F ++I+I+   +   VD A  +  ++   G  P  V  ++LI+G C    +   
Sbjct: 114 RIERDVFHFNILINCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARA 173

Query: 248 NGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDG 307
              F EM+  G +PNL T+N +I   CK GK   A GLL+ M + G  PD   YN+++DG
Sbjct: 174 MEFFDEMVASGYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDG 233

Query: 308 YCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQT 367
            C    +  A +IF  +  KG +  V +Y+IL++G C     EEA +L+ +++S  +   
Sbjct: 234 LCKDRLVSEALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPD 293

Query: 368 VITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFH 427
           V+T+N L+  L + G    AQ +   M    VEP+ +TYN L++G C  N V EA  +F 
Sbjct: 294 VVTFNILVDKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFD 353

Query: 428 MLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKG 487
            +        +  +N LI+G CKA R+D A ELF ++  +GL+P    Y+ +I GLC+ G
Sbjct: 354 AMITKGCMPNVVSYNILINGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQAG 413

Query: 488 KLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTT 547
           +  +A +    M+  GC+P++VT   L+    +       + L   M +    L P+  T
Sbjct: 414 RHCEARELFKDMQAQGCSPDLVTCTILLDSLCKLGYLDNALRLFRAMQDS--CLKPNLVT 471

Query: 548 FSIVVDLLAKDEKYHE 563
           + I++  + K  K + 
Sbjct: 472 YDILIRAMYKSGKIYR 487



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 68/261 (26%), Positives = 130/261 (49%), Gaps = 2/261 (0%)

Query: 309 CLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTV 368
           C +  I+ A   F  M  K     +V ++ L++   +I +    +SL ++I    + + V
Sbjct: 60  CSLTNIEDALFSFNHMIHKHPLPCIVEFDKLLSALVRIKHYGTVLSLSKRIELLRIERDV 119

Query: 369 ITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHM 428
             +N L++   +  +  +A  +  ++     EPD  T++ LI+GLC  +    A++ F  
Sbjct: 120 FHFNILINCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDE 179

Query: 429 LEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGK 488
           +  + ++  +  +N +I G CK G+   A  L  K+ + G  P +V Y+ +I GLC+   
Sbjct: 180 MVASGYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRL 239

Query: 489 LEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTF 548
           + +A D    ++  G  P+V T++ LMHG   +++  +   L ++M     N++PD  TF
Sbjct: 240 VSEALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMS--LNIMPDVVTF 297

Query: 549 SIVVDLLAKDEKYHECSAVSK 569
           +I+VD L K+    E   + K
Sbjct: 298 NILVDKLCKEGMLSEAQGIIK 318


>gi|297801450|ref|XP_002868609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297314445|gb|EFH44868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 526

 Score =  300 bits (769), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 173/488 (35%), Positives = 271/488 (55%), Gaps = 20/488 (4%)

Query: 54  INLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTL 113
           +  NEA   F +M   +P P I  F  L   +AK + +D VI+  + L  +G+  D  T 
Sbjct: 50  LQFNEALDLFSHMVESRPLPSIIDFTRLLNVIAKMKKFDVVINLCKHLQIMGVSNDLYTC 109

Query: 114 NILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALR 173
           N+L+NCF       C  ++   A+     ++  G  PD+ T+ +LINGFC    +  A+ 
Sbjct: 110 NLLMNCF-------CQSSQPCLASSFLGKLMKLGFEPDIFTFTSLINGFCLGNRIEEAMS 162

Query: 174 LHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTT 233
           +  +MV    E G+  K ++  Y+ IIDSLCK G VD A  LF +M+  GI P VV+ T+
Sbjct: 163 MVNQMV----EMGI--KPDVVIYTTIIDSLCKNGHVDNALSLFNQMENYGIRPDVVMYTS 216

Query: 234 LIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRG 293
           L++G C +G W + + L   M+    +P+++TFN +ID   K GK+ +A  L   MIQ  
Sbjct: 217 LVNGLCNSGRWRDADLLLRGMMKRKIKPDVITFNALIDAFVKEGKLLDAKELYNEMIQMS 276

Query: 294 LNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAM 353
           + P+ FTY SL++G C+ GR+D AR++F  M +KGC   VV+Y  LING+CK   VE+AM
Sbjct: 277 IAPNIFTYTSLINGLCMEGRLDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVEDAM 336

Query: 354 SLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGL 413
            ++ ++   G+    ITY TL+ G    G+   AQ++F  M    V P++ TYN+L+  L
Sbjct: 337 KIFYEMSQKGLTGNTITYTTLIQGFGLVGKPNVAQEVFGHMVSRGVPPNIRTYNVLLHCL 396

Query: 414 CKNNCVQEAVKLFHMLEMNKFEF-----GIEIFNCLIDGLCKAGRLDNAWELFHKLPQKG 468
           C N  V +A+ +F   +M K E       I  +N L+ GLC  G+L+ A  +F  + ++ 
Sbjct: 397 CYNGKVNKALMIFE--DMQKREIDGVPPNIRTYNVLLHGLCYNGKLEKALMVFGDMQKRD 454

Query: 469 LVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVV 528
           +   ++TY+I+I G+C+ GK++ A +    +   G  PNVVT+ T++ G  +     +  
Sbjct: 455 MDIGIITYTIIIQGMCKAGKVKDALNLFCSLPSKGVKPNVVTYTTMISGLFREGLMLEAH 514

Query: 529 ELLHKMAE 536
            L  KM E
Sbjct: 515 VLFRKMKE 522



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 112/410 (27%), Positives = 203/410 (49%), Gaps = 9/410 (2%)

Query: 132 RIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKT 191
           +  EA  LF +M+     P +I +  L+N   +     V + L K +      N      
Sbjct: 51  QFNEALDLFSHMVESRPLPSIIDFTRLLNVIAKMKKFDVVINLCKHLQIMGVSN------ 104

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
           ++++ +++++  C+      A     ++   G  P +   T+LI+GFC     EE   + 
Sbjct: 105 DLYTCNLLMNCFCQSSQPCLASSFLGKLMKLGFEPDIFTFTSLINGFCLGNRIEEAMSMV 164

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
            +M+++G +P+++ +  +ID LCK G ++ A  L   M   G+ PD   Y SL++G C  
Sbjct: 165 NQMVEMGIKPDVVIYTTIIDSLCKNGHVDNALSLFNQMENYGIRPDVVMYTSLVNGLCNS 224

Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
           GR   A  +   M  +  K  V+++N LI+ + K   + +A  LY ++I   +   + TY
Sbjct: 225 GRWRDADLLLRGMMKRKIKPDVITFNALIDAFVKEGKLLDAKELYNEMIQMSIAPNIFTY 284

Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
            +L++GL   G+   A+++F  M+     PD+  Y  LI+G CK   V++A+K+F+ +  
Sbjct: 285 TSLINGLCMEGRLDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVEDAMKIFYEMSQ 344

Query: 432 NKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEK 491
                    +  LI G    G+ + A E+F  +  +G+ P + TY++++H LC  GK+ K
Sbjct: 345 KGLTGNTITYTTLIQGFGLVGKPNVAQEVFGHMVSRGVPPNIRTYNVLLHCLCYNGKVNK 404

Query: 492 ANDFLLYMEK---NGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPE 538
           A      M+K   +G  PN+ T+N L+HG   N K  K + +   M + +
Sbjct: 405 ALMIFEDMQKREIDGVPPNIRTYNVLLHGLCYNGKLEKALMVFGDMQKRD 454



 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 102/377 (27%), Positives = 196/377 (51%), Gaps = 1/377 (0%)

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
           +I  ++ +++ + K    D    L   ++  G++  +  C  L++ FC +      +   
Sbjct: 70  SIIDFTRLLNVIAKMKKFDVVINLCKHLQIMGVSNDLYTCNLLMNCFCQSSQPCLASSFL 129

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
            +++ LG  P++ TF  +I+  C G +I EA  ++  M++ G+ PD   Y +++D  C  
Sbjct: 130 GKLMKLGFEPDIFTFTSLINGFCLGNRIEEAMSMVNQMVEMGIKPDVVIYTTIIDSLCKN 189

Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
           G +D A  +F  M + G +  VV Y  L+NG C      +A  L R ++   ++  VIT+
Sbjct: 190 GHVDNALSLFNQMENYGIRPDVVMYTSLVNGLCNSGRWRDADLLLRGMMKRKIKPDVITF 249

Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
           N L+    + G+   A++L++EM   ++ P++ TY  LI+GLC    + EA ++F+++E 
Sbjct: 250 NALIDAFVKEGKLLDAKELYNEMIQMSIAPNIFTYTSLINGLCMEGRLDEARQMFYLMET 309

Query: 432 NKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEK 491
                 +  +  LI+G CK  ++++A ++F+++ QKGL    +TY+ +I G    GK   
Sbjct: 310 KGCFPDVVAYTSLINGFCKCKKVEDAMKIFYEMSQKGLTGNTITYTTLIQGFGLVGKPNV 369

Query: 492 ANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDT-TFSI 550
           A +   +M   G  PN+ T+N L+H    N K +K + +   M + E + VP +  T+++
Sbjct: 370 AQEVFGHMVSRGVPPNIRTYNVLLHCLCYNGKVNKALMIFEDMQKREIDGVPPNIRTYNV 429

Query: 551 VVDLLAKDEKYHECSAV 567
           ++  L  + K  +   V
Sbjct: 430 LLHGLCYNGKLEKALMV 446



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 94/319 (29%), Positives = 153/319 (47%), Gaps = 18/319 (5%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           C SG     +A      M   +  P + +FN L  A  K          Y +++ + + P
Sbjct: 222 CNSG--RWRDADLLLRGMMKRKIKPDVITFNALIDAFVKEGKLLDAKELYNEMIQMSIAP 279

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           +  T   LIN       GLC+E R+ EA  +F  M   G  PDV+ Y +LINGFC+   +
Sbjct: 280 NIFTYTSLIN-------GLCMEGRLDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKV 332

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
             A+++  +M     + GL    N  +Y+ +I      G  + A+E+F  M  RG+ P +
Sbjct: 333 EDAMKIFYEMS----QKGLTG--NTITYTTLIQGFGLVGKPNVAQEVFGHMVSRGVPPNI 386

Query: 229 VVCTTLIHGFCCAGNWEEVNGLFIEMLDL---GPRPNLLTFNVMIDCLCKGGKINEANGL 285
                L+H  C  G   +   +F +M      G  PN+ T+NV++  LC  GK+ +A  +
Sbjct: 387 RTYNVLLHCLCYNGKVNKALMIFEDMQKREIDGVPPNIRTYNVLLHGLCYNGKLEKALMV 446

Query: 286 LELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCK 345
              M +R ++    TY  ++ G C  G++  A  +F S+ SKG K  VV+Y  +I+G  +
Sbjct: 447 FGDMQKRDMDIGIITYTIIIQGMCKAGKVKDALNLFCSLPSKGVKPNVVTYTTMISGLFR 506

Query: 346 ILNVEEAMSLYRQIISNGV 364
              + EA  L+R++  +GV
Sbjct: 507 EGLMLEAHVLFRKMKEDGV 525



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 64/249 (25%), Positives = 117/249 (46%), Gaps = 3/249 (1%)

Query: 338 ILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLY 397
           IL NG    L   EA+ L+  ++ +    ++I +  LL+ + +  +      L   +++ 
Sbjct: 42  ILRNGL-HSLQFNEALDLFSHMVESRPLPSIIDFTRLLNVIAKMKKFDVVINLCKHLQIM 100

Query: 398 NVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNA 457
            V  DL T N+L++  C+++    A      L    FE  I  F  LI+G C   R++ A
Sbjct: 101 GVSNDLYTCNLLMNCFCQSSQPCLASSFLGKLMKLGFEPDIFTFTSLINGFCLGNRIEEA 160

Query: 458 WELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHG 517
             + +++ + G+ P VV Y+ +I  LC+ G ++ A      ME  G  P+VV + +L++G
Sbjct: 161 MSMVNQMVEMGIKPDVVIYTTIIDSLCKNGHVDNALSLFNQMENYGIRPDVVMYTSLVNG 220

Query: 518 FLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKSSYRACLY 577
              + +      LL  M   +R + PD  TF+ ++D   K+ K  +   +     +  + 
Sbjct: 221 LCNSGRWRDADLLLRGMM--KRKIKPDVITFNALIDAFVKEGKLLDAKELYNEMIQMSIA 278

Query: 578 VTIFQPSSL 586
             IF  +SL
Sbjct: 279 PNIFTYTSL 287



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 43/208 (20%), Positives = 94/208 (45%), Gaps = 17/208 (8%)

Query: 356 YRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCK 415
           YR+I+ NG+    + +N  L       ++     + D  +L NV   +  ++++I+ LCK
Sbjct: 39  YREILRNGLHS--LQFNEALDLFSHMVESRPLPSIIDFTRLLNVIAKMKKFDVVIN-LCK 95

Query: 416 NNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVT 475
           +            L++      +   N L++  C++ +   A     KL + G  P + T
Sbjct: 96  H------------LQIMGVSNDLYTCNLLMNCFCQSSQPCLASSFLGKLMKLGFEPDIFT 143

Query: 476 YSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMA 535
           ++ +I+G C   ++E+A   +  M + G  P+VV + T++    +N      + L ++M 
Sbjct: 144 FTSLINGFCLGNRIEEAMSMVNQMVEMGIKPDVVIYTTIIDSLCKNGHVDNALSLFNQME 203

Query: 536 EPERNLVPDDTTFSIVVDLLAKDEKYHE 563
                + PD   ++ +V+ L    ++ +
Sbjct: 204 --NYGIRPDVVMYTSLVNGLCNSGRWRD 229


>gi|15237575|ref|NP_198933.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75309191|sp|Q9FLL3.1|PP412_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g41170, mitochondrial; Flags: Precursor
 gi|9759163|dbj|BAB09719.1| salt-inducible protein-like [Arabidopsis thaliana]
 gi|66792708|gb|AAY56456.1| At5g41170 [Arabidopsis thaliana]
 gi|332007267|gb|AED94650.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 527

 Score =  300 bits (769), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 170/486 (34%), Positives = 271/486 (55%), Gaps = 16/486 (3%)

Query: 54  INLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTL 113
           +  NEA   F +M   +P P I  F  L   +AK + +D VI+    L  +G+  D  T 
Sbjct: 51  LQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTC 110

Query: 114 NILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALR 173
           N+L+NCF       C  ++   A+     M+  G  PD++T+ +LINGFC    +  A+ 
Sbjct: 111 NLLMNCF-------CQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMS 163

Query: 174 LHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTT 233
           +  +MV    E G+  K ++  Y+ IIDSLCK G V+ A  LF +M+  GI P VV+ T+
Sbjct: 164 MVNQMV----EMGI--KPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTS 217

Query: 234 LIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRG 293
           L++G C +G W + + L   M     +P+++TFN +ID   K GK  +A  L   MI+  
Sbjct: 218 LVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMS 277

Query: 294 LNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAM 353
           + P+ FTY SL++G+C+ G +D AR++F  M +KGC   VV+Y  LING+CK   V++AM
Sbjct: 278 IAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAM 337

Query: 354 SLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGL 413
            ++ ++   G+    ITY TL+ G  Q G+   AQ++F  M    V P++ TYN+L+  L
Sbjct: 338 KIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCL 397

Query: 414 CKNNCVQEAVKLFHML---EMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLV 470
           C N  V++A+ +F  +   EM+     I  +N L+ GLC  G+L+ A  +F  + ++ + 
Sbjct: 398 CYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMD 457

Query: 471 PTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVEL 530
             ++TY+I+I G+C+ GK++ A +    +   G  PNVVT+ T++ G  +     +   L
Sbjct: 458 IGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVL 517

Query: 531 LHKMAE 536
             KM E
Sbjct: 518 FRKMKE 523



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 115/410 (28%), Positives = 204/410 (49%), Gaps = 9/410 (2%)

Query: 132 RIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKT 191
           +  EA  LF +M+     P +I +  L+N   +     V + L       D+   +    
Sbjct: 52  QFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINL------CDHLQIMGVSH 105

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
           ++++ +++++  C+      A     +M   G  P +V  T+LI+GFC     EE   + 
Sbjct: 106 DLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMV 165

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
            +M+++G +P+++ +  +ID LCK G +N A  L + M   G+ PD   Y SL++G C  
Sbjct: 166 NQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNS 225

Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
           GR   A  +   M  +  K  V+++N LI+ + K     +A  LY ++I   +   + TY
Sbjct: 226 GRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTY 285

Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
            +L++G    G    A+++F  M+     PD+  Y  LI+G CK   V +A+K+F+ +  
Sbjct: 286 TSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQ 345

Query: 432 NKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEK 491
                    +  LI G  + G+ + A E+F  +  +G+ P + TY++++H LC  GK++K
Sbjct: 346 KGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKK 405

Query: 492 ANDFLLYMEK---NGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPE 538
           A      M+K   +G APN+ T+N L+HG   N K  K + +   M + E
Sbjct: 406 ALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKRE 455



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 102/370 (27%), Positives = 195/370 (52%), Gaps = 1/370 (0%)

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
           +I  ++ +++ + K    D    L   ++  G++  +  C  L++ FC +      +   
Sbjct: 71  SIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFL 130

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
            +M+ LG  P+++TF  +I+  C G ++ EA  ++  M++ G+ PD   Y +++D  C  
Sbjct: 131 GKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKN 190

Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
           G ++ A  +F  M + G +  VV Y  L+NG C      +A SL R +    ++  VIT+
Sbjct: 191 GHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITF 250

Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
           N L+    + G+   A++L++EM   ++ P++ TY  LI+G C   CV EA ++F+++E 
Sbjct: 251 NALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMET 310

Query: 432 NKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEK 491
                 +  +  LI+G CK  ++D+A ++F+++ QKGL    +TY+ +I G  + GK   
Sbjct: 311 KGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNV 370

Query: 492 ANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERN-LVPDDTTFSI 550
           A +   +M   G  PN+ T+N L+H    N K  K + +   M + E + + P+  T+++
Sbjct: 371 AQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNV 430

Query: 551 VVDLLAKDEK 560
           ++  L  + K
Sbjct: 431 LLHGLCYNGK 440



 Score =  135 bits (340), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 95/320 (29%), Positives = 157/320 (49%), Gaps = 20/320 (6%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           C SG     +A      MT  +  P + +FN L  A  K   +      Y +++ + + P
Sbjct: 223 CNSG--RWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAP 280

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           +  T   LIN       G C+E  + EA  +F  M   G  PDV+ Y +LINGFC+   +
Sbjct: 281 NIFTYTSLIN-------GFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKV 333

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
             A+++  +M     + GL    N  +Y+ +I    + G  + A+E+F  M  RG+ P +
Sbjct: 334 DDAMKIFYEMS----QKGLTG--NTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNI 387

Query: 229 VVCTTLIHGFCCAGNWEEVNGLFIEM----LDLGPRPNLLTFNVMIDCLCKGGKINEANG 284
                L+H  C  G  ++   +F +M    +D G  PN+ T+NV++  LC  GK+ +A  
Sbjct: 388 RTYNVLLHCLCYNGKVKKALMIFEDMQKREMD-GVAPNIWTYNVLLHGLCYNGKLEKALM 446

Query: 285 LLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYC 344
           + E M +R ++    TY  ++ G C  G++  A  +F S+ SKG K  VV+Y  +I+G  
Sbjct: 447 VFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLF 506

Query: 345 KILNVEEAMSLYRQIISNGV 364
           +     EA  L+R++  +GV
Sbjct: 507 REGLKHEAHVLFRKMKEDGV 526



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 65/249 (26%), Positives = 118/249 (47%), Gaps = 3/249 (1%)

Query: 338 ILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLY 397
           IL NG    L   EA+ L+  ++ +    ++I +  LL+ + +  +      L D +++ 
Sbjct: 43  ILRNGL-HSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIM 101

Query: 398 NVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNA 457
            V  DL T N+L++  C+++    A      +    FE  I  F  LI+G C   R++ A
Sbjct: 102 GVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEA 161

Query: 458 WELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHG 517
             + +++ + G+ P VV Y+ +I  LC+ G +  A      ME  G  P+VV + +L++G
Sbjct: 162 MSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNG 221

Query: 518 FLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKSSYRACLY 577
              + +      LL  M   +R + PD  TF+ ++D   K+ K+ +   +     R  + 
Sbjct: 222 LCNSGRWRDADSLLRGMT--KRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIA 279

Query: 578 VTIFQPSSL 586
             IF  +SL
Sbjct: 280 PNIFTYTSL 288



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 66/255 (25%), Positives = 121/255 (47%), Gaps = 16/255 (6%)

Query: 41  LNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRK 100
           +N F  E C      ++EAR  F  M      P + ++  L     K +  D  +  + +
Sbjct: 289 INGFCMEGC------VDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYE 342

Query: 101 LVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLIN 160
           +   GL  + +T   LI  FG          +   A  +F +M++ GV P++ TY  L++
Sbjct: 343 MSQKGLTGNTITYTTLIQGFGQ-------VGKPNVAQEVFSHMVSRGVPPNIRTYNVLLH 395

Query: 161 GFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMK 220
             C  G +  AL + + M   + +       NI++Y++++  LC  G ++KA  +F +M+
Sbjct: 396 CLCYNGKVKKALMIFEDMQKREMDG---VAPNIWTYNVLLHGLCYNGKLEKALMVFEDMR 452

Query: 221 GRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKIN 280
            R ++  ++  T +I G C AG  +    LF  +   G +PN++T+  MI  L + G  +
Sbjct: 453 KREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKH 512

Query: 281 EANGLLELMIQRGLN 295
           EA+ L   M + G++
Sbjct: 513 EAHVLFRKMKEDGVS 527


>gi|6633829|gb|AAF19688.1|AC009519_22 F1N19.15 [Arabidopsis thaliana]
          Length = 1048

 Score =  300 bits (767), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 170/461 (36%), Positives = 253/461 (54%), Gaps = 21/461 (4%)

Query: 44  FLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVS 103
           FLH       I   +A   F  M H QP P I  F  L  A A  R Y+ VI F +K+  
Sbjct: 46  FLHS------IRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMEL 99

Query: 104 IGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFC 163
            G+  D  +  ILI+CF       C  +R+  A  +   M+  G  P ++T+G+L++GFC
Sbjct: 100 YGISHDLYSFTILIHCF-------CRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFC 152

Query: 164 RTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRG 223
               +  A  L   MV   YE       N+  Y+ +ID LCK G ++ A EL  EM+ +G
Sbjct: 153 LVNRIGDAFSLVILMVKSGYE------PNVVVYNTLIDGLCKNGELNIALELLNEMEKKG 206

Query: 224 INPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEAN 283
           +   VV   TL+ G C +G W +   +  +M+     P+++TF  +ID   K G ++EA 
Sbjct: 207 LGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQ 266

Query: 284 GLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGY 343
            L + MIQ  ++P+  TYNS+++G C+ GR+  A++ F  M SKGC   VV+YN LI+G+
Sbjct: 267 ELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGF 326

Query: 344 CKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDL 403
           CK   V+E M L++++   G    + TYNTL+ G  Q G+   A  +F  M    V PD+
Sbjct: 327 CKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDI 386

Query: 404 STYNILIDGLCKNNCVQEA-VKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFH 462
            T+ IL+ GLC N  ++ A VK   M E  K+  GI  +N +I GLCKA +++ AWELF 
Sbjct: 387 ITHCILLHGLCVNGEIESALVKFDDMRESEKY-IGIVAYNIMIHGLCKADKVEKAWELFC 445

Query: 463 KLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNG 503
           +LP +G+ P   TY+IMI GLC+ G   +A++ +  M++ G
Sbjct: 446 RLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEEG 486



 Score =  285 bits (729), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 168/483 (34%), Positives = 259/483 (53%), Gaps = 17/483 (3%)

Query: 54   INLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTL 113
            I  ++A   F  M   +P P I  F  +   +AK   +D VI  Y K+ ++G+  D  + 
Sbjct: 583  IKFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSF 642

Query: 114  NILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALR 173
             ILI+CF       C  +R+  A  L   M+  G RP ++T G+L+NGFC+      A+ 
Sbjct: 643  TILIHCF-------CRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVS 695

Query: 174  LHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTT 233
            L   M      +G     N+  Y+ +I+ LCK   ++ A E+F  M+ +GI    V   T
Sbjct: 696  LVDSM------DGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNT 749

Query: 234  LIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRG 293
            LI G   +G W +   L  +M+     PN++ F  +ID   K G + EA  L + MI+R 
Sbjct: 750  LISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRS 809

Query: 294  LNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAM 353
            + P+ FTYNSL++G+C+ G +  A+ +F  M SKGC   VV+YN LI G+CK   VE+ M
Sbjct: 810  VVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGM 869

Query: 354  SLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGL 413
             L+ ++   G+     TYNTL+ G  QAG+   AQK+F+ M    V PD+ TYNIL+D L
Sbjct: 870  KLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCL 929

Query: 414  CKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTV 473
            C N  +++A+ +   L+ ++ +  I  +N +I GLC+  +L  AW LF  L +KG+ P  
Sbjct: 930  CNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDA 989

Query: 474  VTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHK 533
            + Y  MI GLCRKG   +A+     M+++G  P+   ++      L+++ TS   EL+  
Sbjct: 990  IAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYDET----LRDHYTSLSAELIKA 1045

Query: 534  MAE 536
              E
Sbjct: 1046 AHE 1048



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 134/473 (28%), Positives = 221/473 (46%), Gaps = 52/473 (10%)

Query: 132 RIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKT 191
           R ++A  LF  M+     P ++ +  L+            +   +KM     E   IS  
Sbjct: 51  RFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKM-----ELYGISH- 104

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
           +++S++I+I   C+   +  A  +  +M   G  P++V   +L+HGFC      +   L 
Sbjct: 105 DLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLV 164

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
           I M+  G  PN++ +N +ID LCK G++N A  LL  M ++GL  D  TYN+L+ G C  
Sbjct: 165 ILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYS 224

Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
           GR   A  +   M  +     VV++  LI+ + K  N++EA  LY+++I + V    +TY
Sbjct: 225 GRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTY 284

Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
           N++++GL   G+   A+K FD M      P++ TYN LI G CK   V E +KLF  +  
Sbjct: 285 NSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSC 344

Query: 432 NKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVT---------------- 475
             F   I  +N LI G C+ G+L  A ++F  +  + + P ++T                
Sbjct: 345 EGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIES 404

Query: 476 -------------------YSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMH 516
                              Y+IMIHGLC+  K+EKA +    +   G  P+  T+  ++ 
Sbjct: 405 ALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMIL 464

Query: 517 GFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSK 569
           G  +N    +  EL+ +M E             I+  + A+D+   E S+ +K
Sbjct: 465 GLCKNGPRREADELIRRMKEE-----------GIICQMNAEDDHLEEHSSSNK 506



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 108/382 (28%), Positives = 194/382 (50%), Gaps = 2/382 (0%)

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
           +I  ++ ++  + K    D    L+ +M+  GI+  +   T LIH FC          L 
Sbjct: 603 SIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALL 662

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
            +M+ LG RP+++T   +++  C+G +  EA  L++ M   G  P+   YN++++G C  
Sbjct: 663 GKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKN 722

Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
             ++ A E+F  M  KG +   V+YN LI+G        +A  L R ++   +   VI +
Sbjct: 723 RDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFF 782

Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
             L+    + G    A+ L+ EM   +V P++ TYN LI+G C + C+ +A  +F ++  
Sbjct: 783 TALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVS 842

Query: 432 NKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEK 491
                 +  +N LI G CK+ R+++  +LF ++  +GLV    TY+ +IHG C+ GKL  
Sbjct: 843 KGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNV 902

Query: 492 ANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIV 551
           A      M   G +P++VT+N L+     N K  K + ++  + + E ++  D  T++I+
Sbjct: 903 AQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDV--DIITYNII 960

Query: 552 VDLLAKDEKYHECSAVSKSSYR 573
           +  L + +K  E   + +S  R
Sbjct: 961 IQGLCRTDKLKEAWCLFRSLTR 982



 Score =  158 bits (399), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 101/351 (28%), Positives = 168/351 (47%), Gaps = 37/351 (10%)

Query: 237 GFCCAGNWEEVNGLFIEMLDLGPRP----------------------------------- 261
           GF  +  +E+   LF EM+   P P                                   
Sbjct: 45  GFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISH 104

Query: 262 NLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIF 321
           +L +F ++I C C+  +++ A  +L  M++ G  P   T+ SL+ G+CLV RI  A  + 
Sbjct: 105 DLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLV 164

Query: 322 LSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQA 381
           + M   G +  VV YN LI+G CK   +  A+ L  ++   G+   V+TYNTLL+GL  +
Sbjct: 165 ILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYS 224

Query: 382 GQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIF 441
           G+   A ++  +M   ++ PD+ T+  LID   K   + EA +L+  +  +  +     +
Sbjct: 225 GRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTY 284

Query: 442 NCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEK 501
           N +I+GLC  GRL +A + F  +  KG  P VVTY+ +I G C+   +++       M  
Sbjct: 285 NSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSC 344

Query: 502 NGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVV 552
            G   ++ T+NTL+HG+ Q  K    +++   M    R + PD  T  I++
Sbjct: 345 EGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMV--SRRVTPDIITHCILL 393



 Score =  152 bits (383), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 144/560 (25%), Positives = 245/560 (43%), Gaps = 72/560 (12%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
           N  +H  C+ G   L  A   F +M   + +P I +  +L   +  N   ++ +  +  +
Sbjct: 355 NTLIHGYCQVG--KLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDM 412

Query: 102 VSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLING 161
                    +  NI+I+       GLC  +++++A  LF  +   GV+PD  TY  +I G
Sbjct: 413 RESEKYIGIVAYNIMIH-------GLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILG 465

Query: 162 FCRTGNLSVALRLHKKMVSGDYENGLI------------------------------SKT 191
            C+ G    A  L ++M     E G+I                              SK+
Sbjct: 466 LCKNGPRREADELIRRM----KEEGIICQMNAEDDHLEEHSSSNKEISLSLREIWERSKS 521

Query: 192 NIFSYSIIID---SLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGN----- 243
           N F    +I    S   +G V +   L LE   RG NP     T+L   F  A +     
Sbjct: 522 NPFWMQRLIPIAFSSSVKGFV-RRHYLLLE---RGNNPE----TSLSRSFSGASHHHHYR 573

Query: 244 -----------WEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQR 292
                      +++   LF EML   P P+++ F  ++  + K  K +    L   M   
Sbjct: 574 ERLRNELHCIKFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENL 633

Query: 293 GLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEA 352
           G++ D +++  L+  +C   R+  A  +   M   G + ++V+   L+NG+C+    +EA
Sbjct: 634 GISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEA 693

Query: 353 MSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDG 412
           +SL   +   G    V+ YNT+++GL +      A ++F  M+   +  D  TYN LI G
Sbjct: 694 VSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISG 753

Query: 413 LCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPT 472
           L  +    +A +L   +   K +  +  F  LID   K G L  A  L+ ++ ++ +VP 
Sbjct: 754 LSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPN 813

Query: 473 VVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLH 532
           V TY+ +I+G C  G L  A      M   GC P+VVT+NTL+ GF ++ +    ++L  
Sbjct: 814 VFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFC 873

Query: 533 KMAEPERNLVPDDTTFSIVV 552
           +M    + LV D  T++ ++
Sbjct: 874 EMT--YQGLVGDAFTYNTLI 891



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 144/577 (24%), Positives = 240/577 (41%), Gaps = 93/577 (16%)

Query: 55  NLNEARYFFGYMTHMQPSPPISSFN-LLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTL 113
           NL+EA+  +  M      P   ++N ++ G     R YDA  +F   + S G  P+ +T 
Sbjct: 261 NLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTF-DLMASKGCFPNVVTY 319

Query: 114 NILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALR 173
           N LI+       G C    + E   LF+ M   G   D+ TY TLI+G+C+ G L VAL 
Sbjct: 320 NTLIS-------GFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALD 372

Query: 174 --------------------LHKKMVSGDYENGLISKTN---------IFSYSIIIDSLC 204
                               LH   V+G+ E+ L+   +         I +Y+I+I  LC
Sbjct: 373 IFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLC 432

Query: 205 KEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLL 264
           K   V+KA ELF  +   G+ P     T +I G C  G   E + L   M + G    + 
Sbjct: 433 KADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEEGI---IC 489

Query: 265 TFNVMIDCLCKGGKINE-------------------------------ANGLLE---LMI 290
             N   D L +    N+                                 G +    L++
Sbjct: 490 QMNAEDDHLEEHSSSNKEISLSLREIWERSKSNPFWMQRLIPIAFSSSVKGFVRRHYLLL 549

Query: 291 QRGLNPDRFTYNSLMDG--------------YCLVGRIDTAREIFLSMHSKGCKHTVVSY 336
           +RG NP+     S                  +C+  + D A  +F  M       ++V +
Sbjct: 550 ERGNNPETSLSRSFSGASHHHHYRERLRNELHCI--KFDDAFSLFCEMLQSRPIPSIVDF 607

Query: 337 NILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKL 396
             ++    K+   +  + LY ++ + G+   + ++  L+    +  +   A  L  +M  
Sbjct: 608 TRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMK 667

Query: 397 YNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDN 456
               P + T   L++G C+ N  QEAV L   ++   F   + I+N +I+GLCK   L+N
Sbjct: 668 LGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNN 727

Query: 457 AWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMH 516
           A E+F+ + +KG+    VTY+ +I GL   G+   A   L  M K    PNV+ F  L+ 
Sbjct: 728 ALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALID 787

Query: 517 GFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
            F++     +   L  +M    R++VP+  T++ +++
Sbjct: 788 TFVKEGNLLEARNLYKEMI--RRSVVPNVFTYNSLIN 822



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 63/250 (25%), Positives = 121/250 (48%), Gaps = 2/250 (0%)

Query: 304 LMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNG 363
           L  G+    R + A  +F  M       ++V +  L+     +   E  +   +++   G
Sbjct: 42  LRTGFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYG 101

Query: 364 VRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAV 423
           +   + ++  L+    +  +  +A  +  +M     EP + T+  L+ G C  N + +A 
Sbjct: 102 ISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAF 161

Query: 424 KLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGL 483
            L  ++  + +E  + ++N LIDGLCK G L+ A EL +++ +KGL   VVTY+ ++ GL
Sbjct: 162 SLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGL 221

Query: 484 CRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVP 543
           C  G+   A   L  M K    P+VVTF  L+  F++     +  EL  +M +   +  P
Sbjct: 222 CYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVD--P 279

Query: 544 DDTTFSIVVD 553
           ++ T++ +++
Sbjct: 280 NNVTYNSIIN 289


>gi|334183628|ref|NP_001185309.1| tetratricopeptide repeat-like protein [Arabidopsis thaliana]
 gi|193806276|sp|P0C7R3.1|PP106_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g64583, mitochondrial; Flags: Precursor
 gi|332196135|gb|AEE34256.1| tetratricopeptide repeat-like protein [Arabidopsis thaliana]
          Length = 512

 Score =  300 bits (767), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 170/461 (36%), Positives = 253/461 (54%), Gaps = 21/461 (4%)

Query: 44  FLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVS 103
           FLH       I   +A   F  M H QP P I  F  L  A A  R Y+ VI F +K+  
Sbjct: 46  FLHS------IRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMEL 99

Query: 104 IGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFC 163
            G+  D  +  ILI+CF       C  +R+  A  +   M+  G  P ++T+G+L++GFC
Sbjct: 100 YGISHDLYSFTILIHCF-------CRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFC 152

Query: 164 RTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRG 223
               +  A  L   MV   YE       N+  Y+ +ID LCK G ++ A EL  EM+ +G
Sbjct: 153 LVNRIGDAFSLVILMVKSGYE------PNVVVYNTLIDGLCKNGELNIALELLNEMEKKG 206

Query: 224 INPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEAN 283
           +   VV   TL+ G C +G W +   +  +M+     P+++TF  +ID   K G ++EA 
Sbjct: 207 LGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQ 266

Query: 284 GLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGY 343
            L + MIQ  ++P+  TYNS+++G C+ GR+  A++ F  M SKGC   VV+YN LI+G+
Sbjct: 267 ELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGF 326

Query: 344 CKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDL 403
           CK   V+E M L++++   G    + TYNTL+ G  Q G+   A  +F  M    V PD+
Sbjct: 327 CKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDI 386

Query: 404 STYNILIDGLCKNNCVQEA-VKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFH 462
            T+ IL+ GLC N  ++ A VK   M E  K+  GI  +N +I GLCKA +++ AWELF 
Sbjct: 387 ITHCILLHGLCVNGEIESALVKFDDMRESEKY-IGIVAYNIMIHGLCKADKVEKAWELFC 445

Query: 463 KLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNG 503
           +LP +G+ P   TY+IMI GLC+ G   +A++ +  M++ G
Sbjct: 446 RLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEEG 486



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 134/473 (28%), Positives = 221/473 (46%), Gaps = 52/473 (10%)

Query: 132 RIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKT 191
           R ++A  LF  M+     P ++ +  L+            +   +KM     E   IS  
Sbjct: 51  RFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKM-----ELYGISH- 104

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
           +++S++I+I   C+   +  A  +  +M   G  P++V   +L+HGFC      +   L 
Sbjct: 105 DLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLV 164

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
           I M+  G  PN++ +N +ID LCK G++N A  LL  M ++GL  D  TYN+L+ G C  
Sbjct: 165 ILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYS 224

Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
           GR   A  +   M  +     VV++  LI+ + K  N++EA  LY+++I + V    +TY
Sbjct: 225 GRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTY 284

Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
           N++++GL   G+   A+K FD M      P++ TYN LI G CK   V E +KLF  +  
Sbjct: 285 NSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSC 344

Query: 432 NKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVT---------------- 475
             F   I  +N LI G C+ G+L  A ++F  +  + + P ++T                
Sbjct: 345 EGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIES 404

Query: 476 -------------------YSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMH 516
                              Y+IMIHGLC+  K+EKA +    +   G  P+  T+  ++ 
Sbjct: 405 ALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMIL 464

Query: 517 GFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSK 569
           G  +N    +  EL+ +M E             I+  + A+D+   E S+ +K
Sbjct: 465 GLCKNGPRREADELIRRMKEE-----------GIICQMNAEDDHLEEHSSSNK 506



 Score =  158 bits (399), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 101/351 (28%), Positives = 168/351 (47%), Gaps = 37/351 (10%)

Query: 237 GFCCAGNWEEVNGLFIEMLDLGPRP----------------------------------- 261
           GF  +  +E+   LF EM+   P P                                   
Sbjct: 45  GFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISH 104

Query: 262 NLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIF 321
           +L +F ++I C C+  +++ A  +L  M++ G  P   T+ SL+ G+CLV RI  A  + 
Sbjct: 105 DLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLV 164

Query: 322 LSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQA 381
           + M   G +  VV YN LI+G CK   +  A+ L  ++   G+   V+TYNTLL+GL  +
Sbjct: 165 ILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYS 224

Query: 382 GQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIF 441
           G+   A ++  +M   ++ PD+ T+  LID   K   + EA +L+  +  +  +     +
Sbjct: 225 GRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTY 284

Query: 442 NCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEK 501
           N +I+GLC  GRL +A + F  +  KG  P VVTY+ +I G C+   +++       M  
Sbjct: 285 NSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSC 344

Query: 502 NGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVV 552
            G   ++ T+NTL+HG+ Q  K    +++   M    R + PD  T  I++
Sbjct: 345 EGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMV--SRRVTPDIITHCILL 393



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 63/250 (25%), Positives = 121/250 (48%), Gaps = 2/250 (0%)

Query: 304 LMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNG 363
           L  G+    R + A  +F  M       ++V +  L+     +   E  +   +++   G
Sbjct: 42  LRTGFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYG 101

Query: 364 VRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAV 423
           +   + ++  L+    +  +  +A  +  +M     EP + T+  L+ G C  N + +A 
Sbjct: 102 ISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAF 161

Query: 424 KLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGL 483
            L  ++  + +E  + ++N LIDGLCK G L+ A EL +++ +KGL   VVTY+ ++ GL
Sbjct: 162 SLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGL 221

Query: 484 CRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVP 543
           C  G+   A   L  M K    P+VVTF  L+  F++     +  EL  +M +   +  P
Sbjct: 222 CYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVD--P 279

Query: 544 DDTTFSIVVD 553
           ++ T++ +++
Sbjct: 280 NNVTYNSIIN 289


>gi|357442883|ref|XP_003591719.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|357501105|ref|XP_003620841.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355480767|gb|AES61970.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495856|gb|AES77059.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 524

 Score =  298 bits (763), Expect = 5e-78,   Method: Compositional matrix adjust.
 Identities = 175/522 (33%), Positives = 276/522 (52%), Gaps = 54/522 (10%)

Query: 43  EFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAK--NRHYDAVISFYRK 100
            + H    S  +++++A   F  M  M PSP I  FN + G++ K  N +Y   IS Y +
Sbjct: 14  HYSHSKFNSNHVDVHDAISSFYRMLRMNPSPSIIEFNKILGSLVKSNNNNYPIAISLYHR 73

Query: 101 LVSIGLLPDFLTLNILINCF---GNKE-------------------------RGLCVENR 132
           L    + P  +T N +INC+   G  +                         +GLC+  +
Sbjct: 74  LQLNAITPSIVTFNTVINCYCHLGEMDFAFSVLAKILKMGYHPDTITLTTLIKGLCLNGK 133

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
           + EA     ++IA G R + ++YG LING C+ G    AL++ +K+      +G +  TN
Sbjct: 134 VHEALHFHDHVIARGFRLNEVSYGILINGLCKMGETRAALQVLRKI------DGKLVNTN 187

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
           +  YS IIDSLCKE LV +A EL+ +M  + ++P VV  + LI+GFC  G ++E  GLF 
Sbjct: 188 VVMYSTIIDSLCKEKLVTEAYELYSQMIVKKVSPDVVTFSALIYGFCMVGQFKEAFGLFH 247

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
           EM+     P++ TFN+++D LCK G   E   +L +M++                   V 
Sbjct: 248 EMVLTNINPDVCTFNILVDALCKEGSTKETKNVLAVMMKE------------------VN 289

Query: 313 RIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYN 372
           +++ A+ +F  +  +     V SY I+I   CKI  V+EA+SL+ ++   G+    +TY+
Sbjct: 290 QVNKAKHVFNIIGKRRVTPDVHSYTIIIKRLCKIKMVDEALSLFNEMRCKGITPDKVTYS 349

Query: 373 TLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMN 432
           +L+ GL ++ +  +A +L D+M       D+ TY   +  LCKN+ V +AV L   ++  
Sbjct: 350 SLIDGLCKSERISHAWELLDQMHARGQPADVITYTSFLHALCKNHQVDKAVALVKKIKDQ 409

Query: 433 KFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKA 492
             +  I  +N LIDGLCK GR +NA  +F  L  KG   TV TY+IMI+GLC +G  ++A
Sbjct: 410 GIQPNINTYNILIDGLCKEGRFENAQVIFQDLLIKGYKVTVWTYNIMINGLCLEGLFDEA 469

Query: 493 NDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKM 534
              L  ME NGC P+VVT+ T++    +N++  K  +LL +M
Sbjct: 470 MTLLEKMEDNGCTPDVVTYETIIRALFKNDENHKAEKLLREM 511



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 74/322 (22%), Positives = 136/322 (42%), Gaps = 48/322 (14%)

Query: 251 FIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCL 310
           F  ML + P P+++ FN ++  L K    N                              
Sbjct: 34  FYRMLRMNPSPSIIEFNKILGSLVKSNNNNYP---------------------------- 65

Query: 311 VGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVIT 370
                 A  ++  +       ++V++N +IN YC +  ++ A S+  +I+  G     IT
Sbjct: 66  -----IAISLYHRLQLNAITPSIVTFNTVINCYCHLGEMDFAFSVLAKILKMGYHPDTIT 120

Query: 371 YNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLE 430
             TL+ GL   G+   A    D +       +  +Y ILI+GLCK    + A+++   ++
Sbjct: 121 LTTLIKGLCLNGKVHEALHFHDHVIARGFRLNEVSYGILINGLCKMGETRAALQVLRKID 180

Query: 431 MNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLE 490
                  + +++ +ID LCK   +  A+EL+ ++  K + P VVT+S +I+G C  G+ +
Sbjct: 181 GKLVNTNVVMYSTIIDSLCKEKLVTEAYELYSQMIVKKVSPDVVTFSALIYGFCMVGQFK 240

Query: 491 KANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEP------------- 537
           +A      M      P+V TFN L+    +   T +   +L  M +              
Sbjct: 241 EAFGLFHEMVLTNINPDVCTFNILVDALCKEGSTKETKNVLAVMMKEVNQVNKAKHVFNI 300

Query: 538 --ERNLVPDDTTFSIVVDLLAK 557
             +R + PD  +++I++  L K
Sbjct: 301 IGKRRVTPDVHSYTIIIKRLCK 322


>gi|242069919|ref|XP_002450236.1| hypothetical protein SORBIDRAFT_05g002360 [Sorghum bicolor]
 gi|241936079|gb|EES09224.1| hypothetical protein SORBIDRAFT_05g002360 [Sorghum bicolor]
          Length = 833

 Score =  298 bits (763), Expect = 6e-78,   Method: Compositional matrix adjust.
 Identities = 177/545 (32%), Positives = 282/545 (51%), Gaps = 60/545 (11%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
           P + S+N +     +    D   + + +++  G+ PD +T N +I+       GLC    
Sbjct: 302 PDVVSYNTVINGFFREGQVDKAYNLFLQMIDRGIPPDVVTYNTVID-------GLCKAQV 354

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
           +  A  +F+ M+  GV+P   TY  LI+G+  TG     +RL ++M + D E       +
Sbjct: 355 VDRAKAVFQQMLDKGVKPSNGTYNCLIHGYLSTGKWKEVVRLLEEMSTHDLE------PD 408

Query: 193 IFSYSIIIDSLCKEG---------------------LVDKAKELFLEMKGRGINPAVVVC 231
            F Y++++D LCK G                     ++D+A  +F +M+ +G++P VV  
Sbjct: 409 CFIYALLLDYLCKNGRCTEARNIFDSVIRKGIKPDAMIDEAVCIFDKMRQQGLSPNVVNY 468

Query: 232 TTLI-----------------------HGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNV 268
             LI                       +G C    WE+   L  EMLD G R +++ FN 
Sbjct: 469 GALIDALCKLGRVDDAILKFNQMINEVYGLCTVEKWEKAEELVFEMLDQGIRLDVVVFNT 528

Query: 269 MIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKG 328
           ++  LC+ G++ EA  L+ELM++ G+ PD  +YN+L+DG+CL GR D A ++   M S G
Sbjct: 529 LMCDLCREGRVMEAQRLIELMLRVGVRPDVISYNTLVDGHCLTGRTDEAAKLLDVMVSIG 588

Query: 329 CKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQ 388
            K    +YN L++GYCK   +++A SL R+++ NG    V+TYNT+L GLFQ G+   A+
Sbjct: 589 LKPNEFTYNTLLHGYCKARRIDDAYSLLREMLMNGPTPDVVTYNTILHGLFQTGRFSEAK 648

Query: 389 KLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGL 448
           +L+  M     + D+ TYNI+++GLCKNNCV EA K+F  L     +  I  FN +I  L
Sbjct: 649 ELYLNMINSRTQWDMYTYNIILNGLCKNNCVDEAFKMFQSLCSKGLQLHIITFNIMIGAL 708

Query: 449 CKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNV 508
            K G+ ++A +LF  +   GLVP V TY ++   L ++G LE+       ME+NG APN 
Sbjct: 709 LKGGKKEDAMDLFATISAYGLVPDVETYCLIAENLIKEGSLEELGVLFSAMEENGTAPNS 768

Query: 509 VTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVS 568
              N L+  FL     S+    L K+   E+N   + +T S+++ L ++ E Y + +   
Sbjct: 769 RMLNALVRRFLHRGDISRAGAYLSKL--DEKNFSLEASTASMLISLYSRGE-YQQLAKSL 825

Query: 569 KSSYR 573
              YR
Sbjct: 826 PEKYR 830



 Score =  245 bits (625), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 187/612 (30%), Positives = 282/612 (46%), Gaps = 99/612 (16%)

Query: 40  QLNEFLHENCKSGIINLNEARYFFGYM-THMQPSPPISSFNLLFGAV--AKNRH----YD 92
           QL  F+ +  +SG +  ++A   F  +  H +P+  +++FN L  AV  A  RH      
Sbjct: 116 QLERFIADRAQSGSLASHDALKLFDLLLPHARPAS-VTAFNHLLTAVSRASGRHSTLESQ 174

Query: 93  AVISFYRKLV---SIGLLPDFLTLNILINCF---GNKE---------------------- 124
             IS + ++V   S  + PD  T +ILI CF   G  E                      
Sbjct: 175 LGISLFDRMVRECSDKVAPDRCTYSILIGCFCRMGRLEHGFAVFGLILKTGWRVNHIVFN 234

Query: 125 ---RGLCVENRIKEAT-WLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVS 180
              +GLC   R+ EAT  L   M  FG  P+V++Y TL+ GFC       AL L   M  
Sbjct: 235 QLLKGLCDAKRLDEATNILLWRMPEFGCTPNVVSYNTLVKGFCNENRAEEALELLHVMAD 294

Query: 181 GDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCC 240
              + GL    ++ SY+ +I+   +EG VDKA  LFL+M  RGI P VV   T+I G C 
Sbjct: 295 ---DQGLSCPPDVVSYNTVINGFFREGQVDKAYNLFLQMIDRGIPPDVVTYNTVIDGLCK 351

Query: 241 AGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFT 300
           A   +    +F +MLD G +P+  T+N +I      GK  E   LLE M    L PD F 
Sbjct: 352 AQVVDRAKAVFQQMLDKGVKPSNGTYNCLIHGYLSTGKWKEVVRLLEEMSTHDLEPDCFI 411

Query: 301 YNSLMDGYCLVGRIDTAREIFLS---------------------MHSKGCKHTVVSYNIL 339
           Y  L+D  C  GR   AR IF S                     M  +G    VV+Y  L
Sbjct: 412 YALLLDYLCKNGRCTEARNIFDSVIRKGIKPDAMIDEAVCIFDKMRQQGLSPNVVNYGAL 471

Query: 340 INGYCKILNVEEAMSLYRQIIS-----------------------NGVRQTVITYNTLLS 376
           I+  CK+  V++A+  + Q+I+                        G+R  V+ +NTL+ 
Sbjct: 472 IDALCKLGRVDDAILKFNQMINEVYGLCTVEKWEKAEELVFEMLDQGIRLDVVVFNTLMC 531

Query: 377 GLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHM-----LEM 431
            L + G+   AQ+L + M    V PD+ +YN L+DG C      EA KL  +     L+ 
Sbjct: 532 DLCREGRVMEAQRLIELMLRVGVRPDVISYNTLVDGHCLTGRTDEAAKLLDVMVSIGLKP 591

Query: 432 NKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEK 491
           N+F      +N L+ G CKA R+D+A+ L  ++   G  P VVTY+ ++HGL + G+  +
Sbjct: 592 NEF-----TYNTLLHGYCKARRIDDAYSLLREMLMNGPTPDVVTYNTILHGLFQTGRFSE 646

Query: 492 ANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIV 551
           A +  L M  +    ++ T+N +++G  +NN   +  ++   +    + L     TF+I+
Sbjct: 647 AKELYLNMINSRTQWDMYTYNIILNGLCKNNCVDEAFKMFQSLC--SKGLQLHIITFNIM 704

Query: 552 VDLLAKDEKYHE 563
           +  L K  K  +
Sbjct: 705 IGALLKGGKKED 716



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 77/305 (25%), Positives = 138/305 (45%), Gaps = 15/305 (4%)

Query: 41  LNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRK 100
            N  + + C+ G   + EA+     M  +   P + S+N L          D        
Sbjct: 526 FNTLMCDLCREG--RVMEAQRLIELMLRVGVRPDVISYNTLVDGHCLTGRTDEAAKLLDV 583

Query: 101 LVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLIN 160
           +VSIGL P+  T N L++       G C   RI +A  L + M+  G  PDV+TY T+++
Sbjct: 584 MVSIGLKPNEFTYNTLLH-------GYCKARRIDDAYSLLREMLMNGPTPDVVTYNTILH 636

Query: 161 GFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMK 220
           G  +TG  S A  L+  M++        ++ ++++Y+II++ LCK   VD+A ++F  + 
Sbjct: 637 GLFQTGRFSEAKELYLNMINSR------TQWDMYTYNIILNGLCKNNCVDEAFKMFQSLC 690

Query: 221 GRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKIN 280
            +G+   ++    +I      G  E+   LF  +   G  P++ T+ ++ + L K G + 
Sbjct: 691 SKGLQLHIITFNIMIGALLKGGKKEDAMDLFATISAYGLVPDVETYCLIAENLIKEGSLE 750

Query: 281 EANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILI 340
           E   L   M + G  P+    N+L+  +   G I  A      +  K       + ++LI
Sbjct: 751 ELGVLFSAMEENGTAPNSRMLNALVRRFLHRGDISRAGAYLSKLDEKNFSLEASTASMLI 810

Query: 341 NGYCK 345
           + Y +
Sbjct: 811 SLYSR 815



 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 67/234 (28%), Positives = 117/234 (50%), Gaps = 15/234 (6%)

Query: 347 LNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAG------QAGYAQKLFDEMKLY--- 397
           L   +A+ L+  ++ +    +V  +N LL+ + +A       ++     LFD M      
Sbjct: 130 LASHDALKLFDLLLPHARPASVTAFNHLLTAVSRASGRHSTLESQLGISLFDRMVRECSD 189

Query: 398 NVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNA 457
            V PD  TY+ILI   C+   ++    +F ++    +     +FN L+ GLC A RLD A
Sbjct: 190 KVAPDRCTYSILIGCFCRMGRLEHGFAVFGLILKTGWRVNHIVFNQLLKGLCDAKRLDEA 249

Query: 458 WE-LFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKN---GCAPNVVTFNT 513
              L  ++P+ G  P VV+Y+ ++ G C + + E+A + L  M  +    C P+VV++NT
Sbjct: 250 TNILLWRMPEFGCTPNVVSYNTLVKGFCNENRAEEALELLHVMADDQGLSCPPDVVSYNT 309

Query: 514 LMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAV 567
           +++GF +  +  K   L  +M   +R + PD  T++ V+D L K +      AV
Sbjct: 310 VINGFFREGQVDKAYNLFLQMI--DRGIPPDVVTYNTVIDGLCKAQVVDRAKAV 361


>gi|18071404|gb|AAL58263.1|AC068923_5 putative membrane-associated protein [Oryza sativa Japonica Group]
          Length = 1219

 Score =  298 bits (762), Expect = 8e-78,   Method: Compositional matrix adjust.
 Identities = 184/529 (34%), Positives = 280/529 (52%), Gaps = 52/529 (9%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
           P   ++N +      +      I F +K+ S G+ PD +T N L++        LC   R
Sbjct: 267 PNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDY-------LCKNGR 319

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
             EA  +F +M   G++P++ TYGTL+ G+   G L     L   MV     NG+    N
Sbjct: 320 CTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMV----RNGI--HPN 373

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVV----------------------- 229
            + +SI+I +  K+G VD+A  +F +M+ +G+NP  V                       
Sbjct: 374 HYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFE 433

Query: 230 ------------VCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGG 277
                       V  +LIH  C    W++   L +EMLD G   + + FN +ID  CK G
Sbjct: 434 QMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEG 493

Query: 278 KINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYN 337
           ++ E+  L +LM++ G+ PD  TY++L+DGYCL G++D A ++  SM S G K   V+YN
Sbjct: 494 RVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYN 553

Query: 338 ILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLY 397
            LINGYCKI  +E+A+ L+R++ S+GV   +ITYN +L GLFQ  +   A++L+  +   
Sbjct: 554 TLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITES 613

Query: 398 NVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNA 457
             + +LSTYNI++ GLCKNN   EA+++F  L +   +     FN +I  L K GR D A
Sbjct: 614 GTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEA 673

Query: 458 WELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHG 517
            +LF  L   GLVP V TYS+M   L  +G LE+ +D  L ME+NGC  N    N+++  
Sbjct: 674 KDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRK 733

Query: 518 FLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLA--KDEKYHEC 564
            LQ    ++    L  + E   +L  + +T S+ +DLL+  K ++YH C
Sbjct: 734 LLQRGDITRAGTYLFMIDEKHFSL--EASTASLFLDLLSGGKYQEYHSC 780



 Score =  246 bits (627), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 166/562 (29%), Positives = 275/562 (48%), Gaps = 55/562 (9%)

Query: 80  LLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWL 139
           LL G  A  R  DA+    R++  +G +P+  + NIL+       +GLC ENR +EA  L
Sbjct: 132 LLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILL-------KGLCDENRSQEALEL 184

Query: 140 FKNMIAFG--VRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYS 197
            + M   G    PDV++Y T+INGF + G+L  A   + +M+    + G++   N+ +YS
Sbjct: 185 LQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEML----DRGILP--NVVTYS 238

Query: 198 IIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDL 257
            II +LCK   +DKA E+   M   G+ P      +++HG+C +G  +E  G   +M   
Sbjct: 239 SIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSD 298

Query: 258 GPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYC----LV-- 311
           G  P+++T+N ++D LCK G+  EA  + + M +RGL P+  TY +L+ GY     LV  
Sbjct: 299 GVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEM 358

Query: 312 -----------------------------GRIDTAREIFLSMHSKGCKHTVVSYNILING 342
                                        G++D A  +F  M  +G     V+Y  +I  
Sbjct: 359 HGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGI 418

Query: 343 YCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPD 402
            CK   VE+AM  + Q+I   +    I YN+L+  L    +   A++L  EM    +  D
Sbjct: 419 LCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLD 478

Query: 403 LSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFH 462
              +N +ID  CK   V E+ KLF ++     +  I  ++ LIDG C AG++D A +L  
Sbjct: 479 TIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLA 538

Query: 463 KLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNN 522
            +   G+ P  VTY+ +I+G C+  ++E A      ME +G +P+++T+N ++ G  Q  
Sbjct: 539 SMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTR 598

Query: 523 KTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKSSYRACLYVTIFQ 582
           +T+   EL   + E    L  + +T++I++  L K+    E   + ++    CL     +
Sbjct: 599 RTAAAKELYVGITESGTQL--ELSTYNIILHGLCKNNLTDEALRMFQN---LCLTDLQLE 653

Query: 583 PSSLGSMIGCTVRLMPQPEMSD 604
             +   MIG  +++    E  D
Sbjct: 654 TRTFNIMIGALLKVGRNDEAKD 675



 Score =  214 bits (546), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 157/582 (26%), Positives = 262/582 (45%), Gaps = 78/582 (13%)

Query: 58  EARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIG---LLPDFLTLN 114
           +AR+ F  +        I   N     VA++    A +S Y ++   G   + P+  T  
Sbjct: 37  DARHVFDELLRRGRGASIYGLNCALADVARHSPA-AAVSRYNRMARAGADEVTPNLCTYG 95

Query: 115 ILIN---CFGNKE-------------------------RGLCVENRIKEA-TWLFKNMIA 145
           ILI    C G  +                         +GLC + R  +A   + + M  
Sbjct: 96  ILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQ 155

Query: 146 FGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCK 205
            G  P+V +Y  L+ G C       AL L + M     ++G     ++ SY+ +I+   K
Sbjct: 156 LGCIPNVFSYNILLKGLCDENRSQEALELLQMMP----DDGGDCPPDVVSYTTVINGFFK 211

Query: 206 EGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLT 265
           EG +DKA   + EM  RGI P VV  +++I   C A   ++   +   M+  G  PN  T
Sbjct: 212 EGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRT 271

Query: 266 FNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMH 325
           +N ++   C  G+  EA G L+ M   G+ PD  TYNSLMD  C  GR   AR++F SM 
Sbjct: 272 YNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMT 331

Query: 326 SKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAG 385
            +G K  + +Y  L+ GY     + E   L   ++ NG+      ++ L+    + G+  
Sbjct: 332 KRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVD 391

Query: 386 YAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLF-HMLE-------------- 430
            A  +F +M+   + PD  TY  +I  LCK+  V++A++ F  M++              
Sbjct: 392 QAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLI 451

Query: 431 -----MNKFEFGIEI---------------FNCLIDGLCKAGRLDNAWELFHKLPQKGLV 470
                 +K++   E+               FN +ID  CK GR+  + +LF  + + G+ 
Sbjct: 452 HSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVK 511

Query: 471 PTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVEL 530
           P ++TYS +I G C  GK+++A   L  M   G  P+ VT+NTL++G+ + ++    + L
Sbjct: 512 PDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVL 571

Query: 531 LHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKSSY 572
             +M      + PD  T++I++  L +  +    +A +K  Y
Sbjct: 572 FREMESS--GVSPDIITYNIILQGLFQTRR----TAAAKELY 607


>gi|357115764|ref|XP_003559656.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 867

 Score =  297 bits (760), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 178/559 (31%), Positives = 293/559 (52%), Gaps = 55/559 (9%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
           N  +H  CK+  ++  E      +   +QP   ++   ++ G     R  +A    ++++
Sbjct: 311 NSIVHALCKARAMDKAELVLRQMFDNSIQPDE-VTYTAMIHGYSCLGRWKEAA-KMFKEM 368

Query: 102 VSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLING 161
              GL+PD +T N L++        LC   R KEA  +F ++   G +PD+I+Y  L++G
Sbjct: 369 TREGLIPDIVTFNSLMD-------SLCKHKRSKEAAEIFHSIATKGHKPDIISYSILLHG 421

Query: 162 FCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKG 221
           +   G       L   M     +NG+++ ++ F+  I+I++  K G++D+A  +F EM+G
Sbjct: 422 YATEGRFVDMNNLFHSMT----DNGIVADSHCFN--ILINAHAKRGMMDEALLIFTEMRG 475

Query: 222 RGINPAVVVCTT-----------------------------------LIHGFCCAGNWEE 246
           +G++P VV   T                                   LI GFC  G+  +
Sbjct: 476 QGVSPNVVTYATVIAALCRMGRLADAMEKLSQMISIGLKPNTVVYHSLIQGFCTHGDLIK 535

Query: 247 VNGLFIEMLDLG-PRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLM 305
              L  EM+D G PRPN+  F+ +I  LC  G++  A  +  L+I  G  PD FT+NSL+
Sbjct: 536 AKELVSEMMDQGIPRPNITFFSSIIHSLCNEGRVMNAQDVFNLVIHIGDRPDIFTFNSLI 595

Query: 306 DGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVR 365
           DGYCLVG++D A  +  +M S G +  VV+Y+ LINGY K   +++ + L+R+++   V+
Sbjct: 596 DGYCLVGKMDKAFGVLDAMVSAGTEPDVVTYSTLINGYFKSGRIDDGLILFREMLCKRVK 655

Query: 366 QTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKL 425
            T +TY+ +L GLF+AG+   A+K+F EM        +STY I++ GLC+NNC  EA+ L
Sbjct: 656 PTTVTYSLVLDGLFRAGRTSAAKKMFHEMIESGTAMSISTYTIILQGLCRNNCTDEAITL 715

Query: 426 FHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCR 485
           FH L     +F I I N +I  L K  R + A +LF  +   GLVP   TY +MI  L +
Sbjct: 716 FHKLGAMNLKFEIAILNTMIHALYKVKRREEAHDLFASVSASGLVPNASTYGVMIINLLK 775

Query: 486 KGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVP-D 544
           +G +E+A+     MEK GCAP+    N ++   LQ     ++V+  + M++ +  ++  +
Sbjct: 776 EGSVEEADIMFSSMEKTGCAPSSRLLNDIIRMLLQKG---EIVKAGYYMSKVDGTIISLE 832

Query: 545 DTTFSIVVDLLAKDEKYHE 563
            +T S+++ L A   +Y E
Sbjct: 833 ASTTSLLISLFASKGRYRE 851



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 134/519 (25%), Positives = 228/519 (43%), Gaps = 30/519 (5%)

Query: 50  KSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDA-------VISFYRKLV 102
           ++G  +  +A + F  +          + N    A+A+ R   A        ++ + ++ 
Sbjct: 93  RAGTFSTEDAHHLFDELLRQDTPVHGRALNGFLAALARARDSVACSDAPALAVALFNRIC 152

Query: 103 SIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGF 162
                P  + L +  + +G      C   R       F  ++  G+R D I   T +   
Sbjct: 153 REEAGPRVVPLTV--HTYGILMDCCCRARRPDLGPAFFARLLRAGLRTDGIVTNTFLKCL 210

Query: 163 CRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEM-KG 221
           C       AL +    +S   E G +   + FSY+ +I SLC      +A ++ L M KG
Sbjct: 211 CYAKRTDEALSMLLHRMS---ELGCVP--DAFSYNTVIKSLCGGSRSQEALDMLLRMTKG 265

Query: 222 RGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINE 281
            G +P VV  T +IHG    G   +   LF EM+  G  PN++T+N ++  LCK   +++
Sbjct: 266 DGCSPDVVSYTMVIHGLFMEGEISKACNLFNEMVQKGVVPNVVTYNSIVHALCKARAMDK 325

Query: 282 ANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILIN 341
           A  +L  M    + PD  TY +++ GY  +GR   A ++F  M  +G    +V++N L++
Sbjct: 326 AELVLRQMFDNSIQPDEVTYTAMIHGYSCLGRWKEAAKMFKEMTREGLIPDIVTFNSLMD 385

Query: 342 GYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEP 401
             CK    +EA  ++  I + G +  +I+Y+ LL G    G+      LF  M    +  
Sbjct: 386 SLCKHKRSKEAAEIFHSIATKGHKPDIISYSILLHGYATEGRFVDMNNLFHSMTDNGIVA 445

Query: 402 DLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELF 461
           D   +NILI+   K   + EA+ +F  +        +  +  +I  LC+ GRL +A E  
Sbjct: 446 DSHCFNILINAHAKRGMMDEALLIFTEMRGQGVSPNVVTYATVIAALCRMGRLADAMEKL 505

Query: 462 HKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCA-PNVVTFNTLMHGFLQ 520
            ++   GL P  V Y  +I G C  G L KA + +  M   G   PN+  F++++H    
Sbjct: 506 SQMISIGLKPNTVVYHSLIQGFCTHGDLIKAKELVSEMMDQGIPRPNITFFSSIIHSLCN 565

Query: 521 NNKTSKVVELLHKMAEPERNLV------PDDTTFSIVVD 553
             +     ++         NLV      PD  TF+ ++D
Sbjct: 566 EGRVMNAQDVF--------NLVIHIGDRPDIFTFNSLID 596



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 113/419 (26%), Positives = 205/419 (48%), Gaps = 12/419 (2%)

Query: 78  FNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEAT 137
           FN+L  A AK    D  +  + ++   G+ P+ +T   +I         LC   R+ +A 
Sbjct: 450 FNILINAHAKRGMMDEALLIFTEMRGQGVSPNVVTYATVIA-------ALCRMGRLADAM 502

Query: 138 WLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYS 197
                MI+ G++P+ + Y +LI GFC  G+L  A    K++VS   + G I + NI  +S
Sbjct: 503 EKLSQMISIGLKPNTVVYHSLIQGFCTHGDLIKA----KELVSEMMDQG-IPRPNITFFS 557

Query: 198 IIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDL 257
            II SLC EG V  A+++F  +   G  P +    +LI G+C  G  ++  G+   M+  
Sbjct: 558 SIIHSLCNEGRVMNAQDVFNLVIHIGDRPDIFTFNSLIDGYCLVGKMDKAFGVLDAMVSA 617

Query: 258 GPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTA 317
           G  P+++T++ +I+   K G+I++   L   M+ + + P   TY+ ++DG    GR   A
Sbjct: 618 GTEPDVVTYSTLINGYFKSGRIDDGLILFREMLCKRVKPTTVTYSLVLDGLFRAGRTSAA 677

Query: 318 REIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSG 377
           +++F  M   G   ++ +Y I++ G C+    +EA++L+ ++ +  ++  +   NT++  
Sbjct: 678 KKMFHEMIESGTAMSISTYTIILQGLCRNNCTDEAITLFHKLGAMNLKFEIAILNTMIHA 737

Query: 378 LFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFG 437
           L++  +   A  LF  +    + P+ STY ++I  L K   V+EA  +F  +E       
Sbjct: 738 LYKVKRREEAHDLFASVSASGLVPNASTYGVMIINLLKEGSVEEADIMFSSMEKTGCAPS 797

Query: 438 IEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFL 496
             + N +I  L + G +  A     K+    +     T S++I     KG+  +   FL
Sbjct: 798 SRLLNDIIRMLLQKGEIVKAGYYMSKVDGTIISLEASTTSLLISLFASKGRYREQIKFL 856



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 69/241 (28%), Positives = 119/241 (49%), Gaps = 4/241 (1%)

Query: 332 TVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYA-QKL 390
           TV +Y IL++  C+    +   + + +++  G+R   I  NT L  L  A +   A   L
Sbjct: 164 TVHTYGILMDCCCRARRPDLGPAFFARLLRAGLRTDGIVTNTFLKCLCYAKRTDEALSML 223

Query: 391 FDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVK-LFHMLEMNKFEFGIEIFNCLIDGLC 449
              M      PD  +YN +I  LC  +  QEA+  L  M + +     +  +  +I GL 
Sbjct: 224 LHRMSELGCVPDAFSYNTVIKSLCGGSRSQEALDMLLRMTKGDGCSPDVVSYTMVIHGLF 283

Query: 450 KAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVV 509
             G +  A  LF+++ QKG+VP VVTY+ ++H LC+   ++KA   L  M  N   P+ V
Sbjct: 284 MEGEISKACNLFNEMVQKGVVPNVVTYNSIVHALCKARAMDKAELVLRQMFDNSIQPDEV 343

Query: 510 TFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSK 569
           T+  ++HG+    +  +  ++  +M      L+PD  TF+ ++D L K ++  E + +  
Sbjct: 344 TYTAMIHGYSCLGRWKEAAKMFKEMT--REGLIPDIVTFNSLMDSLCKHKRSKEAAEIFH 401

Query: 570 S 570
           S
Sbjct: 402 S 402


>gi|222613080|gb|EEE51212.1| hypothetical protein OsJ_32033 [Oryza sativa Japonica Group]
          Length = 1144

 Score =  297 bits (760), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 184/529 (34%), Positives = 280/529 (52%), Gaps = 52/529 (9%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
           P   ++N +      +      I F +K+ S G+ PD +T N L++        LC   R
Sbjct: 267 PNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDY-------LCKNGR 319

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
             EA  +F +M   G++P++ TYGTL+ G+   G L     L   MV     NG+    N
Sbjct: 320 CTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMV----RNGI--HPN 373

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVV----------------------- 229
            + +SI+I +  K+G VD+A  +F +M+ +G+NP  V                       
Sbjct: 374 HYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFE 433

Query: 230 ------------VCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGG 277
                       V  +LIH  C    W++   L +EMLD G   + + FN +ID  CK G
Sbjct: 434 QMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEG 493

Query: 278 KINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYN 337
           ++ E+  L +LM++ G+ PD  TY++L+DGYCL G++D A ++  SM S G K   V+YN
Sbjct: 494 RVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYN 553

Query: 338 ILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLY 397
            LINGYCKI  +E+A+ L+R++ S+GV   +ITYN +L GLFQ  +   A++L+  +   
Sbjct: 554 TLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITES 613

Query: 398 NVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNA 457
             + +LSTYNI++ GLCKNN   EA+++F  L +   +     FN +I  L K GR D A
Sbjct: 614 GTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEA 673

Query: 458 WELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHG 517
            +LF  L   GLVP V TYS+M   L  +G LE+ +D  L ME+NGC  N    N+++  
Sbjct: 674 KDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRK 733

Query: 518 FLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLA--KDEKYHEC 564
            LQ    ++    L  + E   +L  + +T S+ +DLL+  K ++YH C
Sbjct: 734 LLQRGDITRAGTYLFMIDEKHFSL--EASTASLFLDLLSGGKYQEYHSC 780



 Score =  245 bits (625), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 166/562 (29%), Positives = 275/562 (48%), Gaps = 55/562 (9%)

Query: 80  LLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWL 139
           LL G  A  R  DA+    R++  +G +P+  + NIL+       +GLC ENR +EA  L
Sbjct: 132 LLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILL-------KGLCDENRSQEALEL 184

Query: 140 FKNMIAFG--VRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYS 197
            + M   G    PDV++Y T+INGF + G+L  A   + +M+    + G++   N+ +YS
Sbjct: 185 LQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEML----DRGILP--NVVTYS 238

Query: 198 IIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDL 257
            II +LCK   +DKA E+   M   G+ P      +++HG+C +G  +E  G   +M   
Sbjct: 239 SIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSD 298

Query: 258 GPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYC----LV-- 311
           G  P+++T+N ++D LCK G+  EA  + + M +RGL P+  TY +L+ GY     LV  
Sbjct: 299 GVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEM 358

Query: 312 -----------------------------GRIDTAREIFLSMHSKGCKHTVVSYNILING 342
                                        G++D A  +F  M  +G     V+Y  +I  
Sbjct: 359 HGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGI 418

Query: 343 YCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPD 402
            CK   VE+AM  + Q+I   +    I YN+L+  L    +   A++L  EM    +  D
Sbjct: 419 LCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLD 478

Query: 403 LSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFH 462
              +N +ID  CK   V E+ KLF ++     +  I  ++ LIDG C AG++D A +L  
Sbjct: 479 TIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLA 538

Query: 463 KLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNN 522
            +   G+ P  VTY+ +I+G C+  ++E A      ME +G +P+++T+N ++ G  Q  
Sbjct: 539 SMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTR 598

Query: 523 KTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKSSYRACLYVTIFQ 582
           +T+   EL   + E    L  + +T++I++  L K+    E   + ++    CL     +
Sbjct: 599 RTAAAKELYVGITESGTQL--ELSTYNIILHGLCKNNLTDEALRMFQN---LCLTDLQLE 653

Query: 583 PSSLGSMIGCTVRLMPQPEMSD 604
             +   MIG  +++    E  D
Sbjct: 654 TRTFNIMIGALLKVGRNDEAKD 675



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 157/582 (26%), Positives = 262/582 (45%), Gaps = 78/582 (13%)

Query: 58  EARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIG---LLPDFLTLN 114
           +AR+ F  +        I   N     VA++    A +S Y ++   G   + P+  T  
Sbjct: 37  DARHVFDELLRRGRGASIYGLNCALADVARHSPA-AAVSRYNRMARAGADEVTPNLCTYG 95

Query: 115 ILIN---CFGNKE-------------------------RGLCVENRIKEA-TWLFKNMIA 145
           ILI    C G  +                         +GLC + R  +A   + + M  
Sbjct: 96  ILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQ 155

Query: 146 FGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCK 205
            G  P+V +Y  L+ G C       AL L + M     ++G     ++ SY+ +I+   K
Sbjct: 156 LGCIPNVFSYNILLKGLCDENRSQEALELLQMMP----DDGGDCPPDVVSYTTVINGFFK 211

Query: 206 EGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLT 265
           EG +DKA   + EM  RGI P VV  +++I   C A   ++   +   M+  G  PN  T
Sbjct: 212 EGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRT 271

Query: 266 FNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMH 325
           +N ++   C  G+  EA G L+ M   G+ PD  TYNSLMD  C  GR   AR++F SM 
Sbjct: 272 YNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMT 331

Query: 326 SKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAG 385
            +G K  + +Y  L+ GY     + E   L   ++ NG+      ++ L+    + G+  
Sbjct: 332 KRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVD 391

Query: 386 YAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLF-HMLE-------------- 430
            A  +F +M+   + PD  TY  +I  LCK+  V++A++ F  M++              
Sbjct: 392 QAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLI 451

Query: 431 -----MNKFEFGIEI---------------FNCLIDGLCKAGRLDNAWELFHKLPQKGLV 470
                 +K++   E+               FN +ID  CK GR+  + +LF  + + G+ 
Sbjct: 452 HSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVK 511

Query: 471 PTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVEL 530
           P ++TYS +I G C  GK+++A   L  M   G  P+ VT+NTL++G+ + ++    + L
Sbjct: 512 PDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVL 571

Query: 531 LHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKSSY 572
             +M      + PD  T++I++  L +  +    +A +K  Y
Sbjct: 572 FREMESS--GVSPDIITYNIILQGLFQTRR----TAAAKELY 607


>gi|242067235|ref|XP_002448894.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
 gi|241934737|gb|EES07882.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
          Length = 796

 Score =  296 bits (757), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 179/553 (32%), Positives = 290/553 (52%), Gaps = 52/553 (9%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CK+ +++  E    F  M      P I ++  L         +  V+   +++ + GL P
Sbjct: 250 CKAQVVDRAEG--VFQQMIDKGVRPNIVTYTCLIHGYLSIGQWKEVVRMLKEMSAHGLEP 307

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           D  T  +L++        LC + +  EA  LF +MI  G++PDV  YG +++G+   G L
Sbjct: 308 DCFTYGLLLDY-------LCKKGKCTEARKLFDSMIRKGIKPDVSIYGIILHGYATKGAL 360

Query: 169 S-----------------------VALRLHKKMVSGD--------YENGLISKTNIFSYS 197
           S                       V     KK + G+         + GL    N+ +Y+
Sbjct: 361 SEMHSFLDLMVGNGISPNHYIFNIVFCAFAKKAMIGEAMDIFNKMRQQGL--SPNVVNYA 418

Query: 198 IIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDL 257
            +ID+LCK G VD A+  F +M   G+ P +VV T+L++G C    WE+   LF EM++ 
Sbjct: 419 TLIDALCKLGRVDDAELKFNQMINEGVAPNIVVFTSLVYGLCTIDKWEKAGELFFEMVNQ 478

Query: 258 GPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTA 317
           G  PN++ FN ++  LC  G++ +A  L++LM + G  PD  +YN+L+ G+CLVG+ D A
Sbjct: 479 GIHPNVVFFNTIMCNLCTEGRVMKAQRLIDLMERVGTRPDIISYNALIRGHCLVGKTDEA 538

Query: 318 REIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSG 377
            ++   M S G K    +YN L++GYC+   +++A S++++++SNG+   V+TYNT+L G
Sbjct: 539 SKLLDIMLSVGLKPNECTYNTLLHGYCRDGRIDDAYSVFQEMLSNGITPVVVTYNTILHG 598

Query: 378 LFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFG 437
           LF+  +   A++L+  M     +  + TYNI+++GL KNNCV EA+K+F  L     +  
Sbjct: 599 LFKTRRFSEAKELYLNMITSGKQWSIYTYNIILNGLSKNNCVDEALKMFQSLCSKDLQVD 658

Query: 438 IEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLL 497
           I  FN +I  L K GR ++A  LF  +   GLVP V TY ++   L  +G LE+ +    
Sbjct: 659 IITFNIMIGALLKDGRKEDAMNLFATISANGLVPDVTTYRLIAENLIEEGSLEEFDGMFS 718

Query: 498 YMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAK 557
            MEK+GCAPN +  N L+   L     S+    L K+   E+N   + +T S+++ L ++
Sbjct: 719 EMEKSGCAPNSLMLNFLVRRLLLRGDISRAGAYLSKI--DEKNFSLEASTTSMLISLFSR 776

Query: 558 D--------EKYH 562
           +        EKYH
Sbjct: 777 EEHQAKSLPEKYH 789



 Score =  244 bits (622), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 167/580 (28%), Positives = 272/580 (46%), Gaps = 44/580 (7%)

Query: 27  SPRQIAAVSSPETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVA 86
           S R   AVS    +L   +    ++G +++++A   F    H      I +FN L  AV+
Sbjct: 2   SRRVSTAVSDRCLELERIIGARARAGSLSVDDALKLFDEFLHHARPASIIAFNQLLAAVS 61

Query: 87  KNRHY------DAVISFYRKLVS---IGLLPDFLTLNILINCF---GNKE---------- 124
                      + V+S + +++      + PD  T +IL+ CF   G  E          
Sbjct: 62  SASRRGSSSTSELVVSCFNRMIRDCCSKVAPDVFTYSILVGCFCRMGRLEHGFAAFGLIL 121

Query: 125 ----------------RGLCVENRIKEATW-LFKNMIAFGVRPDVITYGTLINGFCRTGN 167
                           +GLC   R+ EA   L + M   G  P+V++Y TL+ GFC    
Sbjct: 122 KTGWRVNDVVVVNRLLKGLCDAKRVGEAMGVLLRRMSELGCTPNVVSYNTLLKGFCDENR 181

Query: 168 LSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPA 227
              AL L   M  G   +      N+ SY+ +I+    EG VDKA  LFL+M  +GI P 
Sbjct: 182 AEEALELLHMMADGQVRS---CPPNLVSYNTVINGFFTEGQVDKAYNLFLDMTDQGIPPN 238

Query: 228 VVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLE 287
           VV  T +I G C A   +   G+F +M+D G RPN++T+  +I      G+  E   +L+
Sbjct: 239 VVTYTIVIDGLCKAQVVDRAEGVFQQMIDKGVRPNIVTYTCLIHGYLSIGQWKEVVRMLK 298

Query: 288 LMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKIL 347
            M   GL PD FTY  L+D  C  G+   AR++F SM  KG K  V  Y I+++GY    
Sbjct: 299 EMSAHGLEPDCFTYGLLLDYLCKKGKCTEARKLFDSMIRKGIKPDVSIYGIILHGYATKG 358

Query: 348 NVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYN 407
            + E  S    ++ NG+      +N +     +    G A  +F++M+   + P++  Y 
Sbjct: 359 ALSEMHSFLDLMVGNGISPNHYIFNIVFCAFAKKAMIGEAMDIFNKMRQQGLSPNVVNYA 418

Query: 408 ILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQK 467
            LID LCK   V +A   F+ +        I +F  L+ GLC   + + A ELF ++  +
Sbjct: 419 TLIDALCKLGRVDDAELKFNQMINEGVAPNIVVFTSLVYGLCTIDKWEKAGELFFEMVNQ 478

Query: 468 GLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKV 527
           G+ P VV ++ ++  LC +G++ KA   +  ME+ G  P+++++N L+ G     KT + 
Sbjct: 479 GIHPNVVFFNTIMCNLCTEGRVMKAQRLIDLMERVGTRPDIISYNALIRGHCLVGKTDEA 538

Query: 528 VELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAV 567
            +LL  M      L P++ T++ ++    +D +  +  +V
Sbjct: 539 SKLLDIMLSV--GLKPNECTYNTLLHGYCRDGRIDDAYSV 576


>gi|357507167|ref|XP_003623872.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355498887|gb|AES80090.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 539

 Score =  296 bits (757), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 175/473 (36%), Positives = 259/473 (54%), Gaps = 38/473 (8%)

Query: 78  FNLLFGAVAKNRHYDAVISFYRKLVSIGLL-PDFLTLNILINCFGNK------------- 123
           FN L   + K + Y+AV+S Y  L S   + P  +T +ILIN F                
Sbjct: 72  FNKLLSTLIKLKRYNAVVSLYTILQSKPTIKPSLITFSILINAFAQLGQMGFAFSLLGNI 131

Query: 124 ---------------ERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
                           +GLC++ R+ EA  L    +  G R D + YGT+ING C+ G  
Sbjct: 132 LKMGFQIDVRILTTLMKGLCLKGRVLEAVSLLHEYVDRGFRFDEVCYGTIINGLCKIGKT 191

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
             A+++  KM        +    N+  Y+ +ID LCK+GLVD+A  L  EM   GI   V
Sbjct: 192 RDAIQMFPKM------KKIRVYPNLIMYNTVIDGLCKQGLVDEACGLCTEMVENGIELDV 245

Query: 229 VVCTTLIHGFCCAGNWEEVNGLFIEMLDLGP-RPNLLTFNVMIDCLCKGGKINEANGLLE 287
               ++IHGFC  G ++    L  EM+  G   P++ TFN++ID LCK G+++EA  ++ 
Sbjct: 246 YSYNSMIHGFCSVGRFQAAVKLLDEMVVRGKVYPDVYTFNILIDGLCKLGRVSEAYNVVA 305

Query: 288 LMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKIL 347
           +MI+RG  PD  +YN+LM+GYCL G +  A+++F  M  +     V+SY  LINGYCK+ 
Sbjct: 306 VMIKRGWKPDIVSYNALMNGYCLSGSVGEAKQVFDKMVERTALPNVISYCTLINGYCKVR 365

Query: 348 NVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYN 407
            V+EAM L  ++ +  +    +TYN LL GL ++G++ Y   L + M+      DL TYN
Sbjct: 366 MVDEAMVLLTEMHNKNLVPDTVTYNCLLDGLSKSGRSLYEWDLVEAMRASGQPADLITYN 425

Query: 408 ILIDGLCKNNCVQEAVKLF-HMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQ 466
           +L+D   K+    +A+ LF H++E+      I  +N L+DGLCK+GRL  A E+F  L  
Sbjct: 426 VLLDDYFKHEKFDKALALFQHIIEIG-ISPNIRTYNILLDGLCKSGRLKYAKEIFQLLSA 484

Query: 467 KGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFL 519
           KG  P + TY+IMIHGLC++G L++A   L  M  N   PN +TF+T++   L
Sbjct: 485 KGCQPNIRTYNIMIHGLCKEGFLDEAEALLYKMVNNNYLPNYITFDTIVRAIL 537



 Score =  214 bits (546), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 130/441 (29%), Positives = 219/441 (49%), Gaps = 44/441 (9%)

Query: 148 VRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEG 207
           ++P +IT+  LIN F + G +  A  L   ++   ++       ++   + ++  LC +G
Sbjct: 101 IKPSLITFSILINAFAQLGQMGFAFSLLGNILKMGFQ------IDVRILTTLMKGLCLKG 154

Query: 208 LVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFN 267
            V +A  L  E   RG     V   T+I+G C  G   +   +F +M  +   PNL+ +N
Sbjct: 155 RVLEAVSLLHEYVDRGFRFDEVCYGTIINGLCKIGKTRDAIQMFPKMKKIRVYPNLIMYN 214

Query: 268 VMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSK 327
            +ID LCK G ++EA GL   M++ G+  D ++YNS++ G+C VGR   A ++   M  +
Sbjct: 215 TVIDGLCKQGLVDEACGLCTEMVENGIELDVYSYNSMIHGFCSVGRFQAAVKLLDEMVVR 274

Query: 328 GCKH-TVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGY 386
           G  +  V ++NILI+G CK+  V EA ++   +I  G +  +++YN L++G   +G  G 
Sbjct: 275 GKVYPDVYTFNILIDGLCKLGRVSEAYNVVAVMIKRGWKPDIVSYNALMNGYCLSGSVGE 334

Query: 387 AQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLID 446
           A+++FD+M      P++ +Y  LI+G CK   V EA+ L   +           +NCL+D
Sbjct: 335 AKQVFDKMVERTALPNVISYCTLINGYCKVRMVDEAMVLLTEMHNKNLVPDTVTYNCLLD 394

Query: 447 GLCKAGR-----------------------------------LDNAWELFHKLPQKGLVP 471
           GL K+GR                                    D A  LF  + + G+ P
Sbjct: 395 GLSKSGRSLYEWDLVEAMRASGQPADLITYNVLLDDYFKHEKFDKALALFQHIIEIGISP 454

Query: 472 TVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELL 531
            + TY+I++ GLC+ G+L+ A +    +   GC PN+ T+N ++HG  +     +   LL
Sbjct: 455 NIRTYNILLDGLCKSGRLKYAKEIFQLLSAKGCQPNIRTYNIMIHGLCKEGFLDEAEALL 514

Query: 532 HKMAEPERNLVPDDTTFSIVV 552
           +KM     N +P+  TF  +V
Sbjct: 515 YKMV--NNNYLPNYITFDTIV 533


>gi|357498969|ref|XP_003619773.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494788|gb|AES75991.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 452

 Score =  295 bits (756), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 165/464 (35%), Positives = 267/464 (57%), Gaps = 21/464 (4%)

Query: 71  PSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVE 130
           P+P I  F  +F ++ K  H+  VIS   ++   G+  D + LNIL+NCF +  + +C+ 
Sbjct: 4   PTPTIFEFGKIFASLVKINHFHTVISLSHQMELRGIQTDLVNLNILVNCFCHLGQ-VCLN 62

Query: 131 NRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISK 190
           +++KE      ++IA G + + ++YGTLI+G C+ G    A+++ + +      +GL+ +
Sbjct: 63  DKVKETLHFHDDVIAKGFQLNQVSYGTLIDGLCKAGETRAAMQVLRNI------DGLLVQ 116

Query: 191 TNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGL 250
            N+  YS II SLCK+ LV  A +L+ +M  + I+P V+   TL++G    G  +E  GL
Sbjct: 117 PNVVMYSTIIYSLCKDKLVIDAFDLYSQMLLKRISPDVITYNTLMYGCLIVGRLKEAVGL 176

Query: 251 FIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCL 310
           F +ML    +P++ TFN+++D LCK G++ +A  +L +MI++ ++PD  TYNSLMDGY L
Sbjct: 177 FNQMLLKNIKPDIYTFNILVDGLCKEGEMKKARNVLAVMIKQSVDPDVITYNSLMDGYFL 236

Query: 311 VGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVIT 370
           V + + A  +F +M  +G    V SY+++ING CK   V+EA++L +++ S  +    +T
Sbjct: 237 VKQENKATFVFNTMARRGVTPDVHSYSVMINGLCKTKMVDEAVNLLKEMHSKSMAPNTVT 296

Query: 371 YNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLE 430
           Y++L+ GL ++G+   A  L +EM       D+ TYN L+D LCKN+ V +A+ L   ++
Sbjct: 297 YSSLIDGLHKSGRIFDAWDLVNEMHNRGQPADVITYNSLLDALCKNHQVDKAITLLTKIK 356

Query: 431 MNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLE 490
               +  I  +  L+DGLCK GRL +A E++  L              +I G       +
Sbjct: 357 DQGIQPDIYTYTILVDGLCKNGRLKDAQEVYQIL--------------LIKGYHLDSLFD 402

Query: 491 KANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKM 534
           KA   L  ME NGC PN VTF  L+    +N+   K VELL +M
Sbjct: 403 KALSLLSKMEDNGCTPNPVTFEILIRALFENDMNDKAVELLREM 446



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 101/381 (26%), Positives = 189/381 (49%), Gaps = 8/381 (2%)

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNW------EE 246
           IF +  I  SL K         L  +M+ RGI   +V    L++ FC  G        +E
Sbjct: 8   IFEFGKIFASLVKINHFHTVISLSHQMELRGIQTDLVNLNILVNCFCHLGQVCLNDKVKE 67

Query: 247 VNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMD 306
                 +++  G + N +++  +ID LCK G+   A  +L  +    + P+   Y++++ 
Sbjct: 68  TLHFHDDVIAKGFQLNQVSYGTLIDGLCKAGETRAAMQVLRNIDGLLVQPNVVMYSTIIY 127

Query: 307 GYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQ 366
             C    +  A +++  M  K     V++YN L+ G   +  ++EA+ L+ Q++   ++ 
Sbjct: 128 SLCKDKLVIDAFDLYSQMLLKRISPDVITYNTLMYGCLIVGRLKEAVGLFNQMLLKNIKP 187

Query: 367 TVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLF 426
            + T+N L+ GL + G+   A+ +   M   +V+PD+ TYN L+DG        +A  +F
Sbjct: 188 DIYTFNILVDGLCKEGEMKKARNVLAVMIKQSVDPDVITYNSLMDGYFLVKQENKATFVF 247

Query: 427 HMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRK 486
           + +        +  ++ +I+GLCK   +D A  L  ++  K + P  VTYS +I GL + 
Sbjct: 248 NTMARRGVTPDVHSYSVMINGLCKTKMVDEAVNLLKEMHSKSMAPNTVTYSSLIDGLHKS 307

Query: 487 GKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDT 546
           G++  A D +  M   G   +V+T+N+L+    +N++  K + LL K+   ++ + PD  
Sbjct: 308 GRIFDAWDLVNEMHNRGQPADVITYNSLLDALCKNHQVDKAITLLTKIK--DQGIQPDIY 365

Query: 547 TFSIVVDLLAKDEKYHECSAV 567
           T++I+VD L K+ +  +   V
Sbjct: 366 TYTILVDGLCKNGRLKDAQEV 386



 Score =  135 bits (339), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 98/329 (29%), Positives = 167/329 (50%), Gaps = 36/329 (10%)

Query: 58  EARYFFGYMTHMQPSPPISSFN-LLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNIL 116
           +A   +  M   + SP + ++N L++G +   R  +AV  F + L+   + PD  T NIL
Sbjct: 137 DAFDLYSQMLLKRISPDVITYNTLMYGCLIVGRLKEAVGLFNQMLLK-NIKPDIYTFNIL 195

Query: 117 INCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHK 176
           ++       GLC E  +K+A  +   MI   V PDVITY +L++G+      + A  +  
Sbjct: 196 VD-------GLCKEGEMKKARNVLAVMIKQSVDPDVITYNSLMDGYFLVKQENKATFVFN 248

Query: 177 KMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIH 236
            M       G+    ++ SYS++I+ LCK  +VD+A  L  EM  + + P  V  ++LI 
Sbjct: 249 TMA----RRGVTP--DVHSYSVMINGLCKTKMVDEAVNLLKEMHSKSMAPNTVTYSSLID 302

Query: 237 GFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNP 296
           G   +G   +   L  EM + G   +++T+N ++D LCK  ++++A  LL  +  +G+ P
Sbjct: 303 GLHKSGRIFDAWDLVNEMHNRGQPADVITYNSLLDALCKNHQVDKAITLLTKIKDQGIQP 362

Query: 297 DRFTYNSLMDGYCLVGRIDTAREIF-----------------LSMHSK----GCKHTVVS 335
           D +TY  L+DG C  GR+  A+E++                 LS+ SK    GC    V+
Sbjct: 363 DIYTYTILVDGLCKNGRLKDAQEVYQILLIKGYHLDSLFDKALSLLSKMEDNGCTPNPVT 422

Query: 336 YNILINGYCKILNVEEAMSLYRQIISNGV 364
           + ILI    +    ++A+ L R++I+ G+
Sbjct: 423 FEILIRALFENDMNDKAVELLREMIARGL 451



 Score = 95.9 bits (237), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 70/267 (26%), Positives = 117/267 (43%), Gaps = 36/267 (13%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CK G   + +AR     M      P + ++N L       +  +     +  +   G+ P
Sbjct: 200 CKEG--EMKKARNVLAVMIKQSVDPDVITYNSLMDGYFLVKQENKATFVFNTMARRGVTP 257

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           D  + +++IN       GLC    + EA  L K M +  + P+ +TY +LI+G  ++G +
Sbjct: 258 DVHSYSVMIN-------GLCKTKMVDEAVNLLKEMHSKSMAPNTVTYSSLIDGLHKSGRI 310

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
             A  L  +M    +  G     ++ +Y+ ++D+LCK   VDKA  L  ++K +GI P +
Sbjct: 311 FDAWDLVNEM----HNRG--QPADVITYNSLLDALCKNHQVDKAITLLTKIKDQGIQPDI 364

Query: 229 VVCTTLIHGFCCAGNWEEVN---------------------GLFIEMLDLGPRPNLLTFN 267
              T L+ G C  G  ++                        L  +M D G  PN +TF 
Sbjct: 365 YTYTILVDGLCKNGRLKDAQEVYQILLIKGYHLDSLFDKALSLLSKMEDNGCTPNPVTFE 424

Query: 268 VMIDCLCKGGKINEANGLLELMIQRGL 294
           ++I  L +    ++A  LL  MI RGL
Sbjct: 425 ILIRALFENDMNDKAVELLREMIARGL 451


>gi|32527606|gb|AAP86200.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
          Length = 654

 Score =  295 bits (756), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 178/546 (32%), Positives = 282/546 (51%), Gaps = 58/546 (10%)

Query: 53  IINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLT 112
           I  L +A   FG M   +P P +  F  L G V +    D VIS +RK+    +  +  +
Sbjct: 56  IKGLEDAIDLFGDMVRSRPLPSVIDFCKLMGVVVRMGRLDVVISLHRKMEMRRVPCNAYS 115

Query: 113 LNILINCFGNKER----------------------------GLCVENRIKEATWLFKNMI 144
             IL+ CF +  +                            GLCVE+RI EA  LF  M 
Sbjct: 116 FTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFSTLLHGLCVEDRISEALDLFHQM- 174

Query: 145 AFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLC 204
               +P+V+T+ TL+NG CR G +  A+ L  +M+    E+GL  + N  +Y  I+D +C
Sbjct: 175 ---CKPNVVTFTTLMNGLCREGRVVEAVALLDRML----EDGL--QPNQITYGTIVDGMC 225

Query: 205 KEGLVDKAKELFLEMKG-RGINPAVVVC-----TTLIHGFCCAGNWEEVNGLFIEMLDLG 258
           K G    A  L  +M+    I P VV+      T +I+GFC +G W E   L  EML+  
Sbjct: 226 KMGDTVSALNLLRKMEEVSHIKPNVVIWPLERRTCMINGFCSSGRWSEAQQLLQEMLERK 285

Query: 259 P-RPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTA 317
              P+++T+N +I+   K GK  EA  L + M+ RG+ P   TY+S++DG+C   R+D A
Sbjct: 286 KISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDGFCKQNRLDAA 345

Query: 318 REIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSG 377
             +F  M +KGC   ++++N LI GYC+   V++ + L  ++   G+    ITY TL+ G
Sbjct: 346 EHMFYLMATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHG 405

Query: 378 LFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKF--- 434
             Q G    AQ L  EM    V P++ T N L+DGLC N  +++A+++F  ++ +K    
Sbjct: 406 FCQVGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDID 465

Query: 435 --------EFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRK 486
                   E  ++ +N LI GL   G+   A EL+ ++P +G+VP  +TY+ +IHGLC++
Sbjct: 466 ASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYNSVIHGLCKQ 525

Query: 487 GKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDT 546
            +L++A      M     +PNVVTF TL++G+ +  +    +EL  +M    R +V +  
Sbjct: 526 SRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMG--RRGIVANAI 583

Query: 547 TFSIVV 552
           T+  ++
Sbjct: 584 TYITLI 589



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 142/489 (29%), Positives = 231/489 (47%), Gaps = 61/489 (12%)

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
           +++A  LF +M+     P VI +  L+    R G L V + LH+KM             N
Sbjct: 59  LEDAIDLFGDMVRSRPLPSVIDFCKLMGVVVRMGRLDVVISLHRKMEMRRV------PCN 112

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
            +S++I++   C    +  A   F ++   G +P VV  +TL+HG C      E   LF 
Sbjct: 113 AYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFSTLLHGLCVEDRISEALDLFH 172

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
           +M     +PN++TF  +++ LC+ G++ EA  LL+ M++ GL P++ TY +++DG C +G
Sbjct: 173 QMC----KPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMG 228

Query: 313 RIDTAREIFLSMHS-KGCKHTVVSYNI-----LINGYCKILNVEEAMSLYRQIIS-NGVR 365
              +A  +   M      K  VV + +     +ING+C      EA  L ++++    + 
Sbjct: 229 DTVSALNLLRKMEEVSHIKPNVVIWPLERRTCMINGFCSSGRWSEAQQLLQEMLERKKIS 288

Query: 366 QTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKL 425
             V+TYN L++   + G+   A++L+DEM    + P   TY+ +IDG CK N +  A  +
Sbjct: 289 PDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDGFCKQNRLDAAEHM 348

Query: 426 FHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCR 485
           F+++        I  FN LI G C+A R+D+  +L H++ + GLV   +TY+ +IHG C+
Sbjct: 349 FYLMATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQ 408

Query: 486 KGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAE--------- 536
            G L  A D L  M  +G  PNVVT NTL+ G   N K    +E+   M +         
Sbjct: 409 VGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASH 468

Query: 537 -----------------------------------PERNLVPDDTTFSIVVDLLAKDEKY 561
                                              P R +VPD  T++ V+  L K  + 
Sbjct: 469 PFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYNSVIHGLCKQSRL 528

Query: 562 HECSAVSKS 570
            E + +  S
Sbjct: 529 DEATQMFDS 537



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 126/396 (31%), Positives = 199/396 (50%), Gaps = 27/396 (6%)

Query: 49  CKSGIINLNEARYFFGYMTHMQP-SPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLL 107
           C SG    +EA+     M   +  SP + ++N L  A  K   +      Y +++  G++
Sbjct: 266 CSSG--RWSEAQQLLQEMLERKKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGII 323

Query: 108 PDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGN 167
           P  +T + +I+       G C +NR+  A  +F  M   G  PD+IT+ TLI G+CR   
Sbjct: 324 PSTITYSSMID-------GFCKQNRLDAAEHMFYLMATKGCSPDIITFNTLIAGYCRAKR 376

Query: 168 LSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPA 227
           +   ++L  +M     E GL++  N  +Y+ +I   C+ G ++ A++L  EM   G+ P 
Sbjct: 377 VDDGIKLLHEMT----EAGLVA--NTITYTTLIHGFCQVGDLNAAQDLLQEMVSSGVCPN 430

Query: 228 VVVCTTLIHGFCCAGNWEEVNGLFIEM----LDL-------GPRPNLLTFNVMIDCLCKG 276
           VV C TL+ G C  G  ++   +F  M    +D+       G  P++ T+N++I  L   
Sbjct: 431 VVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASHPFNGVEPDVQTYNILISGLINE 490

Query: 277 GKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSY 336
           GK  EA  L E M  RG+ PD  TYNS++ G C   R+D A ++F SM SK     VV++
Sbjct: 491 GKFLEAEELYEEMPHRGIVPDTITYNSVIHGLCKQSRLDEATQMFDSMGSKSFSPNVVTF 550

Query: 337 NILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKL 396
             LINGYCK   V++ + L+ ++   G+    ITY TL+ G  + G    A  +F EM  
Sbjct: 551 TTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLIHGFRKVGNINGALDIFQEMMA 610

Query: 397 YNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMN 432
             V PD  T   ++ GL     ++ AV +   L+M+
Sbjct: 611 SGVYPDTITIRNMLTGLWSKEELKRAVAMLEDLQMS 646



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 63/266 (23%), Positives = 131/266 (49%), Gaps = 11/266 (4%)

Query: 304 LMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNG 363
           L  G+  +  ++ A ++F  M       +V+ +  L+    ++  ++  +SL+R++    
Sbjct: 49  LRSGFHEIKGLEDAIDLFGDMVRSRPLPSVIDFCKLMGVVVRMGRLDVVISLHRKMEMRR 108

Query: 364 VRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAV 423
           V     ++  L+       +  +A   F ++      P + T++ L+ GLC  + + EA+
Sbjct: 109 VPCNAYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFSTLLHGLCVEDRISEAL 168

Query: 424 KLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGL 483
            LFH +     +  +  F  L++GLC+ GR+  A  L  ++ + GL P  +TY  ++ G+
Sbjct: 169 DLFHQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGM 224

Query: 484 CRKGKLEKANDFLLYMEK-NGCAPNVVTF-----NTLMHGFLQNNKTSKVVELLHKMAEP 537
           C+ G    A + L  ME+ +   PNVV +       +++GF  + + S+  +LL +M E 
Sbjct: 225 CKMGDTVSALNLLRKMEEVSHIKPNVVIWPLERRTCMINGFCSSGRWSEAQQLLQEMLE- 283

Query: 538 ERNLVPDDTTFSIVVDLLAKDEKYHE 563
            + + PD  T++ +++   K+ K+ E
Sbjct: 284 RKKISPDVVTYNALINAFVKEGKFFE 309


>gi|356536611|ref|XP_003536830.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 578

 Score =  295 bits (756), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 184/546 (33%), Positives = 291/546 (53%), Gaps = 59/546 (10%)

Query: 55  NLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLN 114
           ++++A   F  M  M P P I  F  + G +AK R+Y   I  Y  +   G++P  +T N
Sbjct: 34  SIDDAVALFHRMVDMHPLPSIVEFTKILGTIAKMRYYATAIDLYTLMEYKGVVPFTVTFN 93

Query: 115 ILINCF---GNKE-------------------------RGLCVENRIKEATWLFKNMIAF 146
           ILINCF   G  +                         +G CV +++ +A +++  M+A 
Sbjct: 94  ILINCFCHMGQMDFAFSVMGKILKWGCRPNVVTFTTLMKGFCVNDKMLDALYIYDEMVAR 153

Query: 147 GVRPDVITYGTLINGFCRT--GNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLC 204
            +R D + YGTLING C++  G    A++L +KM     E   + K N+  Y+ ++  LC
Sbjct: 154 RIRFDDVLYGTLINGLCKSKIGKPRAAVQLLQKM-----EERQLVKPNLIMYNTVVHGLC 208

Query: 205 KEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEV----NG----------- 249
           K+G +++A+ L  +M  +GI P +   ++LI+G C AG  +EV    NG           
Sbjct: 209 KDGNINEARVLCSKMIVQGIFPDIFTYSSLIYGLCRAGQRKEVTSLLNGFCLNNKVDEAR 268

Query: 250 -LFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGY 308
            LF  M++ G + +++ +N++++  C   K+ EA  L  +M++RG  PD  TY  LM GY
Sbjct: 269 ELFNVMIERGEQHDIINYNILMNGYCLNNKVGEARKLFHMMVERGEQPDTITYTILMHGY 328

Query: 309 CLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTV 368
           CL+ ++D AR +F  M  +G    V SYNILI GYCK   V EAM+L   +    +   +
Sbjct: 329 CLIDKVDEARNLFHGMIERGLVPDVWSYNILIKGYCKFERVGEAMNLLEDMFLKNLVPNI 388

Query: 369 ITYNTLLSGLFQAGQAGYAQKLFDEMKL-YNVEPDLSTYNILIDGLCKNNCVQEAVKLF- 426
           ITYN+++ GL ++G    A KL DEM       PD++TYNIL++ LC+  CV++A+  F 
Sbjct: 389 ITYNSVVDGLCKSGGILDAWKLVDEMHYCCQPPPDVTTYNILLESLCRIECVEKAIAFFK 448

Query: 427 HMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRK 486
           H++    F   +  +N LI G CK  RLD A  LF+ +  K LVP +VTY+I++  L   
Sbjct: 449 HLIFERSFAPNVWSYNILISGCCKNRRLDEAINLFNHMCFKNLVPDIVTYNILLDALFNG 508

Query: 487 GKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNN--KTSKVVELLHKMAEPERNLVPD 544
            +L+KA   L+ +   G +PN+ T+N L++G  +    KT++ + L   +    R   PD
Sbjct: 509 QQLDKAIALLVQIVDQGISPNLRTYNILINGLHKGGRPKTAQKISLYLSI----RGYHPD 564

Query: 545 DTTFSI 550
             T+ I
Sbjct: 565 VKTYII 570



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 120/444 (27%), Positives = 223/444 (50%), Gaps = 36/444 (8%)

Query: 163 CRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGR 222
           C+  ++  A+ L  +MV       +    +I  ++ I+ ++ K      A +L+  M+ +
Sbjct: 30  CKFDSIDDAVALFHRMVD------MHPLPSIVEFTKILGTIAKMRYYATAIDLYTLMEYK 83

Query: 223 GINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEA 282
           G+ P  V    LI+ FC  G  +    +  ++L  G RPN++TF  ++   C   K+ +A
Sbjct: 84  GVVPFTVTFNILINCFCHMGQMDFAFSVMGKILKWGCRPNVVTFTTLMKGFCVNDKMLDA 143

Query: 283 NGLLELMIQRGLNPDRFTYNSLMDGYC--LVGRIDTAREIFLSMHSKG-CKHTVVSYNIL 339
             + + M+ R +  D   Y +L++G C   +G+   A ++   M  +   K  ++ YN +
Sbjct: 144 LYIYDEMVARRIRFDDVLYGTLINGLCKSKIGKPRAAVQLLQKMEERQLVKPNLIMYNTV 203

Query: 340 INGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQ---------------- 383
           ++G CK  N+ EA  L  ++I  G+   + TY++L+ GL +AGQ                
Sbjct: 204 VHGLCKDGNINEARVLCSKMIVQGIFPDIFTYSSLIYGLCRAGQRKEVTSLLNGFCLNNK 263

Query: 384 AGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNC 443
              A++LF+ M     + D+  YNIL++G C NN V EA KLFHM+     +     +  
Sbjct: 264 VDEARELFNVMIERGEQHDIINYNILMNGYCLNNKVGEARKLFHMMVERGEQPDTITYTI 323

Query: 444 LIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNG 503
           L+ G C   ++D A  LFH + ++GLVP V +Y+I+I G C+  ++ +A + L  M    
Sbjct: 324 LMHGYCLIDKVDEARNLFHGMIERGLVPDVWSYNILIKGYCKFERVGEAMNLLEDMFLKN 383

Query: 504 CAPNVVTFNTLMHGFLQNN---KTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEK 560
             PN++T+N+++ G  ++       K+V+ +H   +P     PD TT++I+++ L +   
Sbjct: 384 LVPNIITYNSVVDGLCKSGGILDAWKLVDEMHYCCQPP----PDVTTYNILLESLCRI-- 437

Query: 561 YHECSAVSKSSYRACLYVTIFQPS 584
             EC   + + ++  ++   F P+
Sbjct: 438 --ECVEKAIAFFKHLIFERSFAPN 459



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 111/389 (28%), Positives = 198/389 (50%), Gaps = 21/389 (5%)

Query: 188 ISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEV 247
           + + ++ S  +   S CK   +D A  LF  M      P++V  T ++        +   
Sbjct: 14  VRRIHLHSQPLPSQSTCKFDSIDDAVALFHRMVDMHPLPSIVEFTKILGTIAKMRYYATA 73

Query: 248 NGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDG 307
             L+  M   G  P  +TFN++I+C C  G+++ A  ++  +++ G  P+  T+ +LM G
Sbjct: 74  IDLYTLMEYKGVVPFTVTFNILINCFCHMGQMDFAFSVMGKILKWGCRPNVVTFTTLMKG 133

Query: 308 YCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYC--KILNVEEAMSLYRQIISNG-V 364
           +C+  ++  A  I+  M ++  +   V Y  LING C  KI     A+ L +++     V
Sbjct: 134 FCVNDKMLDALYIYDEMVARRIRFDDVLYGTLINGLCKSKIGKPRAAVQLLQKMEERQLV 193

Query: 365 RQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCK--------- 415
           +  +I YNT++ GL + G    A+ L  +M +  + PD+ TY+ LI GLC+         
Sbjct: 194 KPNLIMYNTVVHGLCKDGNINEARVLCSKMIVQGIFPDIFTYSSLIYGLCRAGQRKEVTS 253

Query: 416 -------NNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKG 468
                  NN V EA +LF+++     +  I  +N L++G C   ++  A +LFH + ++G
Sbjct: 254 LLNGFCLNNKVDEARELFNVMIERGEQHDIINYNILMNGYCLNNKVGEARKLFHMMVERG 313

Query: 469 LVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVV 528
             P  +TY+I++HG C   K+++A +    M + G  P+V ++N L+ G+ +  +  + +
Sbjct: 314 EQPDTITYTILMHGYCLIDKVDEARNLFHGMIERGLVPDVWSYNILIKGYCKFERVGEAM 373

Query: 529 ELLHKMAEPERNLVPDDTTFSIVVDLLAK 557
            LL  M    +NLVP+  T++ VVD L K
Sbjct: 374 NLLEDMF--LKNLVPNIITYNSVVDGLCK 400



 Score = 92.4 bits (228), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 67/251 (26%), Positives = 116/251 (46%), Gaps = 15/251 (5%)

Query: 53  IINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLT 112
           I  ++EAR  F  M      P + S+N+L     K       ++    +    L+P+ +T
Sbjct: 331 IDKVDEARNLFHGMIERGLVPDVWSYNILIKGYCKFERVGEAMNLLEDMFLKNLVPNIIT 390

Query: 113 LNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVR--PDVITYGTLINGFCRTGNLSV 170
            N +++       GLC    I +A W   + + +  +  PDV TY  L+   CR   +  
Sbjct: 391 YNSVVD-------GLCKSGGILDA-WKLVDEMHYCCQPPPDVTTYNILLESLCRIECVEK 442

Query: 171 ALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVV 230
           A+   K ++   +E       N++SY+I+I   CK   +D+A  LF  M  + + P +V 
Sbjct: 443 AIAFFKHLI---FERSF--APNVWSYNILISGCCKNRRLDEAINLFNHMCFKNLVPDIVT 497

Query: 231 CTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMI 290
              L+         ++   L ++++D G  PNL T+N++I+ L KGG+   A  +   + 
Sbjct: 498 YNILLDALFNGQQLDKAIALLVQIVDQGISPNLRTYNILINGLHKGGRPKTAQKISLYLS 557

Query: 291 QRGLNPDRFTY 301
            RG +PD  TY
Sbjct: 558 IRGYHPDVKTY 568


>gi|242069921|ref|XP_002450237.1| hypothetical protein SORBIDRAFT_05g002370 [Sorghum bicolor]
 gi|241936080|gb|EES09225.1| hypothetical protein SORBIDRAFT_05g002370 [Sorghum bicolor]
          Length = 757

 Score =  295 bits (755), Expect = 5e-77,   Method: Compositional matrix adjust.
 Identities = 175/540 (32%), Positives = 287/540 (53%), Gaps = 40/540 (7%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CK+ +++   A+  F +M      P   ++  L         +  V+   +++ + GL P
Sbjct: 213 CKAQMVD--RAKGVFQHMIDKGVRPNNHTYTCLIHGYLSIGKWKEVVQMLQEMSTHGLQP 270

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           D     +L++        LC   R  EA  +F ++I  G++P+V  YG L++G+   G+L
Sbjct: 271 DCYIYAVLLDY-------LCKNGRCTEARNIFDSVIRKGIKPNVTIYGILLHGYATEGSL 323

Query: 169 SVALRLHKKMV----SGDY-----------ENGLISKT--------------NIFSYSII 199
           S        MV    S D+           +  +I +               NI +Y  +
Sbjct: 324 SEMHSFLDLMVGNGVSPDHHIFNIMFCAYAKKAMIDEAMHIFDKMRQQRLSPNIVTYGAL 383

Query: 200 IDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGP 259
           ID+LCK G VD A   F +M   G+ P + V ++L++G C    WE+   LF E+LD G 
Sbjct: 384 IDALCKLGRVDDAVLKFNQMIDEGMTPDIFVFSSLVYGLCTVDKWEKAEELFFEVLDQGI 443

Query: 260 RPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTARE 319
           R + + FN ++  LC+ G++ EA  L++LM++ G+ PD  +YN+L+DG+CL GRID A +
Sbjct: 444 RLDTVFFNTLMCNLCREGRVMEAQRLIDLMLRVGVRPDVISYNTLVDGHCLTGRIDEAAK 503

Query: 320 IFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLF 379
           +   + S G K   V+YN L++GYCK   +++A SL+R+++  G+   V+TYNT+L GLF
Sbjct: 504 LLDVIVSIGLKPDKVTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLF 563

Query: 380 QAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIE 439
           Q G+   A++L+  M     + ++ TYNI+I+GLCKNN V EA K+FH L     +  I 
Sbjct: 564 QTGRFSEAKELYLSMINSRTQMNIYTYNIIINGLCKNNFVDEAFKMFHSLCSKDLQLDIF 623

Query: 440 IFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYM 499
             N +I  L K GR ++A +LF  +   GLVP V TY ++   L ++G LE+ ++    M
Sbjct: 624 TANIMIGALLKGGRKEDAMDLFATISAYGLVPDVETYCLIAENLIKEGSLEELDELFSAM 683

Query: 500 EKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDE 559
           E+NG APN    N L+   L     ++    L K+   E+N   + +T S+++ + ++ E
Sbjct: 684 EENGTAPNSRMLNALVRWLLHRGDINRAGAYLSKL--DEKNFSLEASTTSMLISIYSRGE 741



 Score =  260 bits (665), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 181/637 (28%), Positives = 289/637 (45%), Gaps = 115/637 (18%)

Query: 29  RQIAAVSSPETQLNEFLHENCKSGIINLNEARYFFGYM-THMQPSPPISSFNLLFGAVAK 87
           R++ A +    +L   + +   SG + LN+A   F  M TH +P+  + +FN L  AV++
Sbjct: 5   RRVTAAADRCLELERVIADRAHSGSLGLNDALKLFDEMLTHARPA-SVRAFNQLLTAVSR 63

Query: 88  NRHYDA---VISFYRKLV---SIGLLPDFLTLNILINCFGNKER---------------- 125
            R   A   V+S + +++   SI + P   T  ILI CF    R                
Sbjct: 64  ARCSSASELVVSLFNRMIRECSIKVAPSSFTYTILIGCFCRMGRLKHGFAAFGLILKTGW 123

Query: 126 -------------GLCVENRIKEAT-WLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVA 171
                        GLC   R+ EAT  L + M  FG  PDV +Y  L+ GFC       A
Sbjct: 124 RVNDTVIFSQLLKGLCDAKRVDEATDILLRRMPEFGCTPDVFSYSILLKGFCNEKRAEEA 183

Query: 172 LRLHKKMVSGDYENGLISKT-NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVV 230
           L L   M     ++G  S T N+ +Y+ +ID LCK  +VD+AK +F  M  +G+ P    
Sbjct: 184 LELLSMMA----DDGDGSHTPNVVTYTTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHT 239

Query: 231 CTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMI 290
            T LIHG+   G W+EV  +  EM   G +P+   + V++D LCK G+  EA  + + +I
Sbjct: 240 YTCLIHGYLSIGKWKEVVQMLQEMSTHGLQPDCYIYAVLLDYLCKNGRCTEARNIFDSVI 299

Query: 291 QRGLNPDRFTYNSLMDGYCLVGR-----------------------------------ID 315
           ++G+ P+   Y  L+ GY   G                                    ID
Sbjct: 300 RKGIKPNVTIYGILLHGYATEGSLSEMHSFLDLMVGNGVSPDHHIFNIMFCAYAKKAMID 359

Query: 316 TAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAM---------------------- 353
            A  IF  M  +     +V+Y  LI+  CK+  V++A+                      
Sbjct: 360 EAMHIFDKMRQQRLSPNIVTYGALIDALCKLGRVDDAVLKFNQMIDEGMTPDIFVFSSLV 419

Query: 354 -------------SLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVE 400
                         L+ +++  G+R   + +NTL+  L + G+   AQ+L D M    V 
Sbjct: 420 YGLCTVDKWEKAEELFFEVLDQGIRLDTVFFNTLMCNLCREGRVMEAQRLIDLMLRVGVR 479

Query: 401 PDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWEL 460
           PD+ +YN L+DG C    + EA KL  ++     +     +N L+ G CKA R+D+A+ L
Sbjct: 480 PDVISYNTLVDGHCLTGRIDEAAKLLDVIVSIGLKPDKVTYNTLLHGYCKARRIDDAYSL 539

Query: 461 FHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQ 520
           F ++  KGL P VVTY+ ++HGL + G+  +A +  L M  +    N+ T+N +++G  +
Sbjct: 540 FREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIIINGLCK 599

Query: 521 NNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAK 557
           NN   +  ++ H +    ++L  D  T +I++  L K
Sbjct: 600 NNFVDEAFKMFHSLC--SKDLQLDIFTANIMIGALLK 634



 Score = 46.6 bits (109), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 34/127 (26%), Positives = 56/127 (44%), Gaps = 9/127 (7%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
           N  LH   ++G    +EA+  +  M + +    I ++N++   + KN   D     +  L
Sbjct: 556 NTILHGLFQTG--RFSEAKELYLSMINSRTQMNIYTYNIIINGLCKNNFVDEAFKMFHSL 613

Query: 102 VSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLING 161
            S  L  D  T NI+I         L    R ++A  LF  + A+G+ PDV TY  +   
Sbjct: 614 CSKDLQLDIFTANIMIG-------ALLKGGRKEDAMDLFATISAYGLVPDVETYCLIAEN 666

Query: 162 FCRTGNL 168
             + G+L
Sbjct: 667 LIKEGSL 673


>gi|302774715|ref|XP_002970774.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
 gi|300161485|gb|EFJ28100.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
          Length = 497

 Score =  293 bits (751), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 166/496 (33%), Positives = 271/496 (54%), Gaps = 26/496 (5%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
           P + ++N L   + KN   D     +  + S+   P  +T N L++       GL    +
Sbjct: 8   PNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLD-------GLFRTGK 60

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
           ++ A  LF+ M+      DVI++  L+ G CR G +  AL   +KM             N
Sbjct: 61  LERAMALFQEMLDRRSH-DVISFNILVTGLCRAGKIETALEFFRKMDDR-------CSPN 112

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFC----CAGNWEEVN 248
           + +YS++ID LCK   V +A EL   MK RG +P V+  T L+ G C     A  WE   
Sbjct: 113 VITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWE--- 169

Query: 249 GLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGY 308
            +  EMLD G  PNL+T+N ++  LC+  ++++A  L+  M  RG  P+  TY +L+DG 
Sbjct: 170 -VLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGL 228

Query: 309 CLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTV 368
           C VGR+  A  +   M  KG    ++ YN+LING CK   V+E+++L R+ +S G++  V
Sbjct: 229 CKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDV 288

Query: 369 ITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHM 428
           +TY++++ GL ++ +   A +L   +K     PD+  Y+ LIDGLCK   V EA  L+ +
Sbjct: 289 VTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEV 348

Query: 429 LEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGK 488
           +  +  +  +  ++ LIDGLCKAGR+D A  L  ++ + G  P+ +TY+ +I GLC    
Sbjct: 349 MTGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNH 408

Query: 489 LEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKT-SKVVELLHKMAEPERNLVPDDTT 547
           L++A + +  ME++ CAP+ VT+N L+HG  +  +  S  ++   +M   +  ++PD  T
Sbjct: 409 LDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAALDYFQEMI--DNGVIPDHIT 466

Query: 548 FSIVVDLLAKDEKYHE 563
           +SI+++ L K +  HE
Sbjct: 467 YSILLEGLKKSKDLHE 482



 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 143/443 (32%), Positives = 235/443 (53%), Gaps = 16/443 (3%)

Query: 56  LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNI 115
           L  A   F  M   + S  + SFN+L   + +    +  + F+RK+      P+ +T ++
Sbjct: 61  LERAMALFQEMLDRR-SHDVISFNILVTGLCRAGKIETALEFFRKM-DDRCSPNVITYSV 118

Query: 116 LINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLH 175
           LI+       GLC  NR+ +A  L ++M A G  PDVITY  L++G C+   ++ A  + 
Sbjct: 119 LID-------GLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVL 171

Query: 176 KKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLI 235
           ++M+    + G +   N+ +Y+ ++  LC+   V  A  L  +M  RG  P VV   TLI
Sbjct: 172 REML----DAGCVP--NLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLI 225

Query: 236 HGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLN 295
            G C  G  ++   +  +M+D G  P+L+ +N++I+ LCK  +++E+  LL   +  G+ 
Sbjct: 226 DGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIK 285

Query: 296 PDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSL 355
           PD  TY+S++ G C   R+D A  + L + S+GC   V+ Y+ LI+G CK   V+EA  L
Sbjct: 286 PDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDL 345

Query: 356 YRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCK 415
           Y  +  +G    V+TY+TL+ GL +AG+   A  L   M      P   TYN LI GLC 
Sbjct: 346 YEVMTGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCD 405

Query: 416 NNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNA-WELFHKLPQKGLVPTVV 474
            N + EA++L   +E +        +N LI G+C+  R+D+A  + F ++   G++P  +
Sbjct: 406 LNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAALDYFQEMIDNGVIPDHI 465

Query: 475 TYSIMIHGLCRKGKLEKANDFLL 497
           TYSI++ GL +   L +    +L
Sbjct: 466 TYSILLEGLKKSKDLHELRHLVL 488



 Score =  195 bits (495), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 118/378 (31%), Positives = 188/378 (49%), Gaps = 35/378 (9%)

Query: 219 MKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGK 278
           M+  G  P VV   +LI G C     +    LF  M  +   P+++T+N ++D L + GK
Sbjct: 1   MRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGK 60

Query: 279 INEANGLLELMIQR-------------GL--------------------NPDRFTYNSLM 305
           +  A  L + M+ R             GL                    +P+  TY+ L+
Sbjct: 61  LERAMALFQEMLDRRSHDVISFNILVTGLCRAGKIETALEFFRKMDDRCSPNVITYSVLI 120

Query: 306 DGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVR 365
           DG C   R+  A E+  SM ++GC   V++Y IL++G CK   V  A  + R+++  G  
Sbjct: 121 DGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCV 180

Query: 366 QTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKL 425
             ++TYN+LL GL +A +   A  L  +M      P++ TY  LIDGLCK   V++A  +
Sbjct: 181 PNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAM 240

Query: 426 FHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCR 485
              +        + I+N LI+GLCKA ++D +  L  +    G+ P VVTYS +I+GLCR
Sbjct: 241 LADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCR 300

Query: 486 KGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDD 545
             +L++A   LLY++  GC P+V+ ++TL+ G  +  K  +  +L   M     +   D 
Sbjct: 301 SNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMTGDGCD--ADV 358

Query: 546 TTFSIVVDLLAKDEKYHE 563
            T+S ++D L K  +  E
Sbjct: 359 VTYSTLIDGLCKAGRVDE 376



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 106/335 (31%), Positives = 174/335 (51%), Gaps = 10/335 (2%)

Query: 254 MLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGR 313
           M D G  PN++T+N +ID LCK  + + A  L E M     +P   TYN+L+DG    G+
Sbjct: 1   MRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGK 60

Query: 314 IDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNT 373
           ++ A  +F  M  +   H V+S+NIL+ G C+   +E A+  +R+ + +     VITY+ 
Sbjct: 61  LERAMALFQEMLDRR-SHDVISFNILVTGLCRAGKIETALEFFRK-MDDRCSPNVITYSV 118

Query: 374 LLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNK 433
           L+ GL +A +   A +L + MK     PD+ TY IL+DGLCK + V  A ++   +    
Sbjct: 119 LIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAG 178

Query: 434 FEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKAN 493
               +  +N L+ GLC+A R+ +A  L   +  +G  P VVTY  +I GLC+ G+++ A 
Sbjct: 179 CVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDAC 238

Query: 494 DFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
             L  M   G  P+++ +N L++G  + ++  + + LL +       + PD  T+S V+ 
Sbjct: 239 AMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSG--GIKPDVVTYSSVIY 296

Query: 554 LLAKDEKYHE-CSAVSKSSYRAC-----LYVTIFQ 582
            L +  +  E C  +     R C     LY T+  
Sbjct: 297 GLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLID 331



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 82/260 (31%), Positives = 129/260 (49%), Gaps = 16/260 (6%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CK G   + +A      M     +P +  +N+L   + K    D  I+  R+ VS G+ P
Sbjct: 229 CKVG--RVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKP 286

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           D +T + +I        GLC  NR+ EA  L   + + G  PDVI Y TLI+G C+ G +
Sbjct: 287 DVVTYSSVI-------YGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKV 339

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
             A  L++ M +GD         ++ +YS +ID LCK G VD+A  L   M   G  P+ 
Sbjct: 340 DEAFDLYEVM-TGDG-----CDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPST 393

Query: 229 VVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEAN-GLLE 287
           +   +LI G C   + +E   L  EM      P+ +T+N++I  +C+  +++ A     +
Sbjct: 394 MTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAALDYFQ 453

Query: 288 LMIQRGLNPDRFTYNSLMDG 307
            MI  G+ PD  TY+ L++G
Sbjct: 454 EMIDNGVIPDHITYSILLEG 473



 Score = 56.2 bits (134), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 36/121 (29%), Positives = 53/121 (43%), Gaps = 10/121 (8%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CK+G   ++EA      M  M   P   ++N L   +    H D  I    ++      P
Sbjct: 369 CKAG--RVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAP 426

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATW-LFKNMIAFGVRPDVITYGTLINGFCRTGN 167
             +T NILI+       G+C   R+  A    F+ MI  GV PD ITY  L+ G  ++ +
Sbjct: 427 SAVTYNILIH-------GMCRMERVDSAALDYFQEMIDNGVIPDHITYSILLEGLKKSKD 479

Query: 168 L 168
           L
Sbjct: 480 L 480


>gi|41152687|dbj|BAD08212.1| hypothetical protein [Oryza sativa Indica Group]
 gi|46091163|dbj|BAD13710.1| PPR protein [Oryza sativa Indica Group]
 gi|67906116|dbj|BAE00068.1| PPR protein [Oryza sativa Indica Group]
 gi|114437073|gb|ABI74690.1| fertility restorer [Oryza sativa Indica Group]
          Length = 683

 Score =  293 bits (751), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 187/588 (31%), Positives = 293/588 (49%), Gaps = 67/588 (11%)

Query: 34  VSSPETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDA 93
           V S  T +N F  E       +L++    +  M   + SP + ++N +  A+ K +  D 
Sbjct: 88  VVSYSTVINGFFKEG------DLDKTYSTYNEMLDQRISPNVVTYNSIIAALCKAQTVDK 141

Query: 94  VISFYRKLVSIGLLPDFLTLNILINCF---GNKERG------------------------ 126
            +     +V  G++PD +T N +++ F   G  +                          
Sbjct: 142 AMEVLTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMD 201

Query: 127 -LCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMV-SGDYE 184
            LC   R  EA  +F +M   G++P++ TYGTL+ G+   G L     L   MV +G + 
Sbjct: 202 YLCKNGRCTEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHP 261

Query: 185 NGLI---------------------SKT-------NIFSYSIIIDSLCKEGLVDKAKELF 216
           N  +                     SK        N  +Y  +I  LCK G V+ A   F
Sbjct: 262 NHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYF 321

Query: 217 LEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKG 276
            +M   G++P  +V  +LIHG C    WE    L +EMLD G   N + FN +ID  CK 
Sbjct: 322 EQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKE 381

Query: 277 GKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSY 336
           G++ E+  L +LM++ G+ PD  TY++L+DGYCL G++D A ++  SM S G K   V+Y
Sbjct: 382 GRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTY 441

Query: 337 NILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKL 396
           + LINGYCKI  +++A+ L+R++ S+GV   +ITYN +L GLFQ  +   A++L+  +  
Sbjct: 442 STLINGYCKISRMKDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITK 501

Query: 397 YNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDN 456
              + +LSTYNI++ GLCKN    +A+++F  L +   +     FN +ID L K GR D 
Sbjct: 502 SGRQLELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNDE 561

Query: 457 AWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMH 516
           A +LF      GLVP   TY +M   +  +G LE+ +   L ME NGC  +    N ++ 
Sbjct: 562 AKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVR 621

Query: 517 GFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLA--KDEKYH 562
             LQ  + ++    L  + E   +L  + +T S+ +DLL+  K ++YH
Sbjct: 622 ELLQRGEITRAGTYLSMIDEKHFSL--EASTASLFIDLLSGGKYQEYH 667



 Score =  232 bits (591), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 149/490 (30%), Positives = 245/490 (50%), Gaps = 52/490 (10%)

Query: 107 LPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFG--VRPDVITYGTLINGFCR 164
           +PD  + NIL+N       GLC ENR +EA  L   M   G    PDV++Y T+INGF +
Sbjct: 48  IPDVFSYNILLN-------GLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVINGFFK 100

Query: 165 TGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGI 224
            G+L      + +M+     +  IS  N+ +Y+ II +LCK   VDKA E+   M   G+
Sbjct: 101 EGDLDKTYSTYNEML-----DQRISP-NVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGV 154

Query: 225 NPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANG 284
            P  +   +++HGFC +G  +E      +M   G  P+++T+N ++D LCK G+  EA  
Sbjct: 155 MPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARK 214

Query: 285 LLELMIQRGLNPDRFTYNSLMDGYCLVG-------------------------------- 312
           + + M +RGL P+  TY +L+ GY   G                                
Sbjct: 215 IFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYA 274

Query: 313 ---RIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVI 369
              +++ A  +F  M  +G     V+Y  +I   CK   VE+AM  + Q+I  G+    I
Sbjct: 275 KQEKVEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNI 334

Query: 370 TYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHML 429
            YN+L+ GL    +   A++L  EM    +  +   +N +ID  CK   V E+ KLF ++
Sbjct: 335 VYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLM 394

Query: 430 EMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKL 489
                +  I  ++ LIDG C AG++D A +L   +   G+ P  VTYS +I+G C+  ++
Sbjct: 395 VRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYSTLINGYCKISRM 454

Query: 490 EKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFS 549
           + A      ME +G +P+++T+N ++ G  Q  +T+   EL   + +  R L  + +T++
Sbjct: 455 KDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITKSGRQL--ELSTYN 512

Query: 550 IVVDLLAKDE 559
           I++  L K++
Sbjct: 513 IILHGLCKNK 522



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 140/478 (29%), Positives = 229/478 (47%), Gaps = 54/478 (11%)

Query: 134 KEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNI 193
           ++A  +F  ++  G+ PDV +Y  L+NG C       AL L   M     ++G     ++
Sbjct: 34  EDARHVFDELLRRGI-PDVFSYNILLNGLCDENRSQEALELLHIMA----DDGGDCPPDV 88

Query: 194 FSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIE 253
            SYS +I+   KEG +DK    + EM  + I+P VV   ++I   C A   ++   +   
Sbjct: 89  VSYSTVINGFFKEGDLDKTYSTYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTT 148

Query: 254 MLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGR 313
           M+  G  P+ +T+N ++   C  G+  EA   L+ M   G+ PD  TYNSLMD  C  GR
Sbjct: 149 MVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGR 208

Query: 314 IDTAREIFLSMHSKGCKHTVVSYNILING------------------------------- 342
              AR+IF SM  +G K  + +Y  L+ G                               
Sbjct: 209 CTEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSI 268

Query: 343 ----YCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYN 398
               Y K   VEEAM ++ ++   G+    +TY  ++  L ++G+   A   F++M    
Sbjct: 269 LVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEG 328

Query: 399 VEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEI----FNCLIDGLCKAGRL 454
           + P    YN LI GLC  N  + A +L  +LEM   + GI +    FN +ID  CK GR+
Sbjct: 329 LSPGNIVYNSLIHGLCTCNKWERAEEL--ILEM--LDRGICLNTIFFNSIIDSHCKEGRV 384

Query: 455 DNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTL 514
             + +LF  + + G+ P ++TYS +I G C  GK+++A   L  M   G  P+ VT++TL
Sbjct: 385 IESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYSTL 444

Query: 515 MHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKSSY 572
           ++G+ + ++    + L  +M      + PD  T++I++  L +  +    +A +K  Y
Sbjct: 445 INGYCKISRMKDALVLFREMESS--GVSPDIITYNIILQGLFQTRR----TAAAKELY 496


>gi|42408236|dbj|BAD09393.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|125601932|gb|EAZ41257.1| hypothetical protein OsJ_25765 [Oryza sativa Japonica Group]
          Length = 798

 Score =  293 bits (750), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 185/532 (34%), Positives = 272/532 (51%), Gaps = 18/532 (3%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
           N  LH  C SG    N+A   F  M      P + ++N L G + KN         +  +
Sbjct: 277 NSLLHGYCSSG--KPNDAIGVFKRMCRDGVEPDVFTYNTLMGYLCKNGRSMEARKIFDSM 334

Query: 102 VSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLING 161
           V  G  P+  T   L++       G   E  + +   L   M+  G++PD   +  LI  
Sbjct: 335 VKRGHKPNSATYGTLLH-------GYATEGSLVKMHHLLDMMVRNGIQPDHYIFNILIGT 387

Query: 162 FCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKG 221
           + + G +  A+ L  KM       GL   T   +Y I++D+LC  G VD A   F  +  
Sbjct: 388 YTKHGKVDDAMLLFSKM----RRQGLNPDT--VTYGIVMDALCMVGKVDDAMAQFGRLIS 441

Query: 222 RGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINE 281
            G+ P  VV   LIHG C    W++   L +EM+  G  PN + FN +++ LCK G +  
Sbjct: 442 EGLTPDAVVFRNLIHGLCARDKWDKAEELAVEMIGRGICPNNIFFNTLLNHLCKEGMVAR 501

Query: 282 ANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILIN 341
           A  + +LM++  +  D  TYN+L+DGYCL G++D A ++   M   G K   V+YN +IN
Sbjct: 502 AKNIFDLMVRVDVQRDVITYNTLIDGYCLHGKVDEAAKLLEGMVLDGVKPNEVTYNTMIN 561

Query: 342 GYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEP 401
           GYCK   +E+A SL+RQ+ S GV   ++TY+T+L GLFQA +   A++L+  M    ++ 
Sbjct: 562 GYCKNGRIEDAFSLFRQMASKGVNPGIVTYSTILQGLFQARRTAAAKELYLWMIKSGIKF 621

Query: 402 DLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELF 461
           D+ TYNI++ GLC+NNC  +A+++F  L +  F      FN +ID L K GR D A +LF
Sbjct: 622 DIGTYNIILLGLCQNNCTDDALRIFQNLYLIDFHLENRTFNIMIDALLKGGRHDEAKDLF 681

Query: 462 HKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQN 521
             L  +GLVP VVTY +M+  L  +G LE+ +D  L +EKNGC  N    N L+   LQ 
Sbjct: 682 ASLLARGLVPNVVTYWLMMKSLIEQGLLEELDDLFLSLEKNGCTANSRMLNALVGKLLQK 741

Query: 522 NKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKSSYR 573
            +  K    L K+   E N   + +T   +V LL    KY +        YR
Sbjct: 742 GEVRKAGVYLSKI--DENNFSLEASTAESLV-LLVSSGKYDQHINAIPEKYR 790



 Score =  214 bits (546), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 166/624 (26%), Positives = 280/624 (44%), Gaps = 74/624 (11%)

Query: 8   RCLFSSETVSKVKLSSLFK-SPRQIAAVSSPETQ-----LNEFLHENCKSGIINLNEA-- 59
           R + S+   +KV   +L K   RQ AA +  ++       +E LH    S I++LN A  
Sbjct: 3   RRVLSAPDGTKVSRFNLMKLQGRQEAAAAGTDSHHAHHAFDELLHRPTTSSIVDLNRALS 62

Query: 60  -----------RYFFGYMTHMQPS--PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGL 106
                        F   +   +P   P + +++++    ++  H D   +   +++  G 
Sbjct: 63  DAARHSPAVAISLFRRMVMVARPKVPPNLITYSVVIDCCSRVGHLDLAFAALGRVIRSGW 122

Query: 107 LPDFLTLNILINCFGNKERGLCVENRIKEATWL-FKNMIAFGVRPDVITYGTLINGFCRT 165
             + +T + L+       + LC + R  EA  +  + M   G  P+V +Y  L+ G C  
Sbjct: 123 TAEAITFSPLL-------KALCDKKRTSEAMDIALRRMPVLGCTPNVFSYTILLKGLCDE 175

Query: 166 GNLSVALRL-HKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGL-VDKAKELFLEMKGRG 223
                AL L H  MV+ D   G     ++ SY+ +I+ L +EG  +D A  LF +M  +G
Sbjct: 176 NRSQQALHLLHTMMVADDTRGGY--PPDVVSYNTVINGLLREGRQLDTAYHLFDQMLDQG 233

Query: 224 INPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEAN 283
           ++P VV   ++I     A   ++   + + M+  G  PN +T N ++   C  GK N+A 
Sbjct: 234 LSPDVVTYNSIISALSKARAMDKAAVVLVRMVKNGAMPNRITHNSLLHGYCSSGKPNDAI 293

Query: 284 GLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGY 343
           G+ + M + G+ PD FTYN+LM   C  GR   AR+IF SM  +G K    +Y  L++GY
Sbjct: 294 GVFKRMCRDGVEPDVFTYNTLMGYLCKNGRSMEARKIFDSMVKRGHKPNSATYGTLLHGY 353

Query: 344 CKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDL 403
               ++ +   L   ++ NG++     +N L+    + G+   A  LF +M+   + PD 
Sbjct: 354 ATEGSLVKMHHLLDMMVRNGIQPDHYIFNILIGTYTKHGKVDDAMLLFSKMRRQGLNPDT 413

Query: 404 STYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHK 463
            TY I++D LC    V +A+  F  L          +F  LI GLC   + D A EL  +
Sbjct: 414 VTYGIVMDALCMVGKVDDAMAQFGRLISEGLTPDAVVFRNLIHGLCARDKWDKAEELAVE 473

Query: 464 LPQKGLVPT-----------------------------------VVTYSIMIHGLCRKGK 488
           +  +G+ P                                    V+TY+ +I G C  GK
Sbjct: 474 MIGRGICPNNIFFNTLLNHLCKEGMVARAKNIFDLMVRVDVQRDVITYNTLIDGYCLHGK 533

Query: 489 LEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTF 548
           +++A   L  M  +G  PN VT+NT+++G+ +N +      L  +MA    N  P   T+
Sbjct: 534 VDEAAKLLEGMVLDGVKPNEVTYNTMINGYCKNGRIEDAFSLFRQMASKGVN--PGIVTY 591

Query: 549 SIVVDLLAKDEKYHECSAVSKSSY 572
           S ++  L +  +    +A +K  Y
Sbjct: 592 STILQGLFQARR----TAAAKELY 611


>gi|242067351|ref|XP_002448952.1| hypothetical protein SORBIDRAFT_05g002320 [Sorghum bicolor]
 gi|241934795|gb|EES07940.1| hypothetical protein SORBIDRAFT_05g002320 [Sorghum bicolor]
          Length = 455

 Score =  293 bits (750), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 163/458 (35%), Positives = 255/458 (55%), Gaps = 16/458 (3%)

Query: 116 LINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLH 175
           +++ +GNK         + E   L   M+A G+ P+   +    + + + G +  A+ + 
Sbjct: 1   MLHGYGNK-------GALSEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGMIDKAMDIF 53

Query: 176 KKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLI 235
            KM     ++GL    +  SY  +ID+LCK G VD A+  F +M   G+ P +VV ++L+
Sbjct: 54  NKM----RQHGL--SPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFSSLV 107

Query: 236 HGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLN 295
           +G C    WE+V  LF EML++G  PN++ FN ++  LCK G++ E   L++ +   G+ 
Sbjct: 108 YGLCSIDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVR 167

Query: 296 PDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSL 355
           PD  +YN+L+DG+CL G ID A ++   M S G K    SYN L++GYCK   ++ A SL
Sbjct: 168 PDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPNSFSYNTLLHGYCKAGRIDSAYSL 227

Query: 356 YRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCK 415
           +R+++SNG+   V+TYNT+L GLFQ  +   A++L+  M     +  + TYN +++GLCK
Sbjct: 228 FRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKWGIYTYNTILNGLCK 287

Query: 416 NNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVT 475
           +NCV EA K+F  L     +  I  F  +I  L K GR ++A +LF  +P  GLVP VVT
Sbjct: 288 SNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPDVVT 347

Query: 476 YSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMA 535
           Y ++   L  +G LE+ +     MEKNG APN    N L+   L     S+    L K+ 
Sbjct: 348 YRVVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKL- 406

Query: 536 EPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKSSYR 573
             ERN   + +T S+++ + + DE  H   ++ K  YR
Sbjct: 407 -DERNFSVEASTTSMLISIFSSDEYQHHAKSLPK-KYR 442



 Score =  195 bits (495), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 119/425 (28%), Positives = 204/425 (48%), Gaps = 13/425 (3%)

Query: 56  LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNI 115
           L+E       M     SP    FN+ F A AK    D  +  + K+   GL PD ++   
Sbjct: 11  LSEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPDAVSYGA 70

Query: 116 LINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLH 175
           LI+        LC   R+ +A   F  MI  GV P+++ + +L+ G C          L 
Sbjct: 71  LID-------ALCKLGRVDDAEVKFNQMINEGVTPNIVVFSSLVYGLCSIDKWEKVEELF 123

Query: 176 KKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLI 235
            +M++           NI  ++ I+ +LCKEG V + + L   ++  G+ P V+   TLI
Sbjct: 124 FEMLNVGIH------PNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLI 177

Query: 236 HGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLN 295
            G C AG  +E + L   M+ +G +PN  ++N ++   CK G+I+ A  L   M+  G+ 
Sbjct: 178 DGHCLAGTIDEASKLLEGMVSVGLKPNSFSYNTLLHGYCKAGRIDSAYSLFRKMLSNGIT 237

Query: 296 PDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSL 355
           P   TYN+++ G     R   A+E++L+M + G K  + +YN ++NG CK   V+EA  +
Sbjct: 238 PGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKWGIYTYNTILNGLCKSNCVDEAFKM 297

Query: 356 YRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCK 415
           ++ + S G++  +IT+  ++  L + G+   A  LF  +    + PD+ TY ++ + L +
Sbjct: 298 FQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPDVVTYRVVAENLIE 357

Query: 416 NNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVT 475
              ++E   LF  +E N      ++ N L+  L   G +  A     KL ++       T
Sbjct: 358 EGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEAST 417

Query: 476 YSIMI 480
            S++I
Sbjct: 418 TSMLI 422



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 73/264 (27%), Positives = 122/264 (46%), Gaps = 15/264 (5%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
           N  +  +C +G I+  EA      M  +   P   S+N L     K    D+  S +RK+
Sbjct: 174 NTLIDGHCLAGTID--EASKLLEGMVSVGLKPNSFSYNTLLHGYCKAGRIDSAYSLFRKM 231

Query: 102 VSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLING 161
           +S G+ P  +T N +++       GL    R  EA  L+ NMI  G +  + TY T++NG
Sbjct: 232 LSNGITPGVVTYNTILH-------GLFQTKRFSEAKELYLNMINSGTKWGIYTYNTILNG 284

Query: 162 FCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKG 221
            C++  +  A ++ + + S     GL  + NI +++I+I +L K G  + A +LF  +  
Sbjct: 285 LCKSNCVDEAFKMFQSLCS----KGL--QLNIITFTIMIGALLKGGRKEDAMDLFAAIPA 338

Query: 222 RGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINE 281
            G+ P VV    +       G+ EE + LF  M   G  PN    N ++  L   G I+ 
Sbjct: 339 NGLVPDVVTYRVVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISR 398

Query: 282 ANGLLELMIQRGLNPDRFTYNSLM 305
           A   L  + +R  + +  T + L+
Sbjct: 399 AGAYLSKLDERNFSVEASTTSMLI 422


>gi|115482730|ref|NP_001064958.1| Os10g0497300 [Oryza sativa Japonica Group]
 gi|41152691|dbj|BAD08215.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|113639567|dbj|BAF26872.1| Os10g0497300 [Oryza sativa Japonica Group]
 gi|215693996|dbj|BAG89195.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 794

 Score =  293 bits (749), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 183/528 (34%), Positives = 279/528 (52%), Gaps = 52/528 (9%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
           P   ++N +      +      I F +K+ S G+ PD +T N L++        LC   R
Sbjct: 267 PNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDY-------LCKNGR 319

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
             EA  +F +M   G++P++ TYGTL+ G+   G L     L   MV     NG+    N
Sbjct: 320 CTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMV----RNGI--HPN 373

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVV----------------------- 229
            + +SI+I +  K+G VD+A  +F +M+ +G+NP  V                       
Sbjct: 374 HYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFE 433

Query: 230 ------------VCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGG 277
                       V  +LIH  C    W++   L +EMLD G   + + FN +ID  CK G
Sbjct: 434 QMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEG 493

Query: 278 KINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYN 337
           ++ E+  L +LM++ G+ PD  TY++L+DGYCL G++D A ++  SM S G K   V+YN
Sbjct: 494 RVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYN 553

Query: 338 ILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLY 397
            LINGYCKI  +E+A+ L+R++ S+GV   +ITYN +L GLFQ  +   A++L+  +   
Sbjct: 554 TLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITES 613

Query: 398 NVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNA 457
             + +LSTYNI++ GLCKNN   EA+++F  L +   +     FN +I  L K GR D A
Sbjct: 614 GTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEA 673

Query: 458 WELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHG 517
            +LF  L   GLVP V TYS+M   L  +G LE+ +D  L ME+NGC  N    N+++  
Sbjct: 674 KDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRK 733

Query: 518 FLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLA--KDEKYHE 563
            LQ    ++    L  + E   +L  + +T S+ +DLL+  K ++YH 
Sbjct: 734 LLQRGDITRAGTYLFMIDEKHFSL--EASTASLFLDLLSGGKYQEYHR 779



 Score =  244 bits (624), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 166/562 (29%), Positives = 275/562 (48%), Gaps = 55/562 (9%)

Query: 80  LLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWL 139
           LL G  A  R  DA+    R++  +G +P+  + NIL+       +GLC ENR +EA  L
Sbjct: 132 LLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILL-------KGLCDENRSQEALEL 184

Query: 140 FKNMIAFG--VRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYS 197
            + M   G    PDV++Y T+INGF + G+L  A   + +M+    + G++   N+ +YS
Sbjct: 185 LQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEML----DRGILP--NVVTYS 238

Query: 198 IIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDL 257
            II +LCK   +DKA E+   M   G+ P      +++HG+C +G  +E  G   +M   
Sbjct: 239 SIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSD 298

Query: 258 GPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYC----LV-- 311
           G  P+++T+N ++D LCK G+  EA  + + M +RGL P+  TY +L+ GY     LV  
Sbjct: 299 GVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEM 358

Query: 312 -----------------------------GRIDTAREIFLSMHSKGCKHTVVSYNILING 342
                                        G++D A  +F  M  +G     V+Y  +I  
Sbjct: 359 HGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGI 418

Query: 343 YCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPD 402
            CK   VE+AM  + Q+I   +    I YN+L+  L    +   A++L  EM    +  D
Sbjct: 419 LCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLD 478

Query: 403 LSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFH 462
              +N +ID  CK   V E+ KLF ++     +  I  ++ LIDG C AG++D A +L  
Sbjct: 479 TIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLA 538

Query: 463 KLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNN 522
            +   G+ P  VTY+ +I+G C+  ++E A      ME +G +P+++T+N ++ G  Q  
Sbjct: 539 SMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTR 598

Query: 523 KTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKSSYRACLYVTIFQ 582
           +T+   EL   + E    L  + +T++I++  L K+    E   + ++    CL     +
Sbjct: 599 RTAAAKELYVGITESGTQL--ELSTYNIILHGLCKNNLTDEALRMFQN---LCLTDLQLE 653

Query: 583 PSSLGSMIGCTVRLMPQPEMSD 604
             +   MIG  +++    E  D
Sbjct: 654 TRTFNIMIGALLKVGRNDEAKD 675



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 157/582 (26%), Positives = 262/582 (45%), Gaps = 78/582 (13%)

Query: 58  EARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIG---LLPDFLTLN 114
           +AR+ F  +        I   N     VA++    A +S Y ++   G   + P+  T  
Sbjct: 37  DARHVFDELLRRGRGASIYGLNCALADVARHSPA-AAVSRYNRMARAGADEVTPNLCTYG 95

Query: 115 ILIN---CFGNKE-------------------------RGLCVENRIKEA-TWLFKNMIA 145
           ILI    C G  +                         +GLC + R  +A   + + M  
Sbjct: 96  ILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQ 155

Query: 146 FGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCK 205
            G  P+V +Y  L+ G C       AL L + M     ++G     ++ SY+ +I+   K
Sbjct: 156 LGCIPNVFSYNILLKGLCDENRSQEALELLQMMP----DDGGDCPPDVVSYTTVINGFFK 211

Query: 206 EGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLT 265
           EG +DKA   + EM  RGI P VV  +++I   C A   ++   +   M+  G  PN  T
Sbjct: 212 EGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRT 271

Query: 266 FNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMH 325
           +N ++   C  G+  EA G L+ M   G+ PD  TYNSLMD  C  GR   AR++F SM 
Sbjct: 272 YNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMT 331

Query: 326 SKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAG 385
            +G K  + +Y  L+ GY     + E   L   ++ NG+      ++ L+    + G+  
Sbjct: 332 KRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVD 391

Query: 386 YAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLF-HMLE-------------- 430
            A  +F +M+   + PD  TY  +I  LCK+  V++A++ F  M++              
Sbjct: 392 QAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLI 451

Query: 431 -----MNKFEFGIEI---------------FNCLIDGLCKAGRLDNAWELFHKLPQKGLV 470
                 +K++   E+               FN +ID  CK GR+  + +LF  + + G+ 
Sbjct: 452 HSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVK 511

Query: 471 PTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVEL 530
           P ++TYS +I G C  GK+++A   L  M   G  P+ VT+NTL++G+ + ++    + L
Sbjct: 512 PDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVL 571

Query: 531 LHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKSSY 572
             +M      + PD  T++I++  L +  +    +A +K  Y
Sbjct: 572 FREMESS--GVSPDIITYNIILQGLFQTRR----TAAAKELY 607


>gi|357499659|ref|XP_003620118.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
 gi|355495133|gb|AES76336.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
          Length = 841

 Score =  293 bits (749), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 161/456 (35%), Positives = 256/456 (56%), Gaps = 18/456 (3%)

Query: 100 KLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLI 159
           K++  G  PD +TL   I       +G C++ +I +A      +IA G   D ++YGTLI
Sbjct: 253 KILKNGYEPDTITLTTFI-------KGFCLKGQIHQALHFHDKVIAMGFHLDQVSYGTLI 305

Query: 160 NGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEM 219
           NG C+ G    AL L ++       +G + + ++  Y+ IID +CK+  V+ A +L+ E 
Sbjct: 306 NGLCKVGETKAALELLRR------NDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEK 359

Query: 220 KGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKI 279
             + I P V     LI GFC  G  ++   LF +M      P++ TF++++D  CK G I
Sbjct: 360 VSKRIFPDVFTYNALISGFCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNI 419

Query: 280 NEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNIL 339
            EA  +L +M+++ + PD  TY+SLMDGYCLV  ++ A  IF +M  +G    V SYNI+
Sbjct: 420 KEAKNVLAMMMKQSIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIM 479

Query: 340 INGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNV 399
           ING+CKI  V+EAM L++++    +   VITY++L+ GL ++G+  YA +L DEM     
Sbjct: 480 INGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQ 539

Query: 400 EPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWE 459
           +PD+ TYN ++D LCK + V +A+ L   L+       +  +  L+ GLC++G+L++A +
Sbjct: 540 QPDIITYNSILDALCKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDARK 599

Query: 460 LFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFL 519
           +F  L  KG    V  Y++MI G C KG  ++A   L  ME+NGC P+  T+  ++    
Sbjct: 600 VFEDLLVKGYNLDVYAYTVMIQGFCDKGLFDEALALLSKMEENGCIPDAKTYEIIILSLF 659

Query: 520 QNNKTSKVVELLHKMAEPERNL---VPDDTTFSIVV 552
           + ++     +LL +M    R L   + DD   SI+V
Sbjct: 660 EKDENDMAEKLLREMI--MRGLLVALTDDLVASILV 693



 Score =  207 bits (528), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 153/582 (26%), Positives = 266/582 (45%), Gaps = 85/582 (14%)

Query: 55  NLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLN 114
           N N+A   F  +    P+PP   F  + G++ K++HY  V+S  +K+   G+  +FL  N
Sbjct: 90  NNNDAVSLFYRLLRQNPTPPDIEFGKILGSLVKSKHYHTVLSLSQKMEFKGIKLNFLNCN 149

Query: 115 ILIN----------CFGNKERGL--------CVENR----------IKEATWLFKNM--- 143
           ILIN           F    RG+        C + +          I    W FK +   
Sbjct: 150 ILINSFCQLGLIPFAFSVLTRGVYWIEILKDCFDRKNLEDFKRLCWIVLILWDFKRLFLK 209

Query: 144 ---------IAFGVRPDVITYGTLINGFCRTGNLSVALRLH-KKMVSGDYENGLISKTNI 193
                    +    +  +  + T I   C   +  +++     K++   YE   I+ T  
Sbjct: 210 DFLQSRLFNVLHSFKILIEYHKTFIKQKCLLKSFEISIEYTPPKILKNGYEPDTITLTT- 268

Query: 194 FSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIE 253
                 I   C +G + +A     ++   G +   V   TLI+G C  G  +    L   
Sbjct: 269 -----FIKGFCLKGQIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVGETKAALELLRR 323

Query: 254 MLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGR 313
                 +P+++ +N +ID +CK   +N+A  L    + + + PD FTYN+L+ G+C+VG+
Sbjct: 324 NDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNALISGFCIVGK 383

Query: 314 IDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNT 373
           +  A ++F  M SK     V +++IL++G+CK  N++EA ++   ++   ++  V+TY++
Sbjct: 384 LKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDVVTYSS 443

Query: 374 LLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNK 433
           L+ G     +   A+ +F+ M    V  ++ +YNI+I+G CK   V EA+KLF  +   +
Sbjct: 444 LMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQ 503

Query: 434 FEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKAN 493
               +  ++ LIDGLCK+GR+  A EL  ++  +G  P ++TY+ ++  LC+K  ++KA 
Sbjct: 504 IFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDALCKKHHVDKAI 563

Query: 494 DFLLYMEKNGCAPNVVTFNTLMHGFLQNNK---TSKVVE--------------------- 529
             L  ++  G  P++ T+  L+ G  Q+ K     KV E                     
Sbjct: 564 TLLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTVMIQGF 623

Query: 530 -----------LLHKMAEPERNLVPDDTTFSIVV-DLLAKDE 559
                      LL KM   E   +PD  T+ I++  L  KDE
Sbjct: 624 CDKGLFDEALALLSKM--EENGCIPDAKTYEIIILSLFEKDE 663



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 105/360 (29%), Positives = 175/360 (48%), Gaps = 13/360 (3%)

Query: 72  SPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVEN 131
            P +  +N +   + K++H +     Y + VS  + PD  T N LI+       G C+  
Sbjct: 330 QPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNALIS-------GFCIVG 382

Query: 132 RIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKT 191
           ++K+A  LF  M +  + PDV T+  L++GFC+ GN+  A  +   M+          K 
Sbjct: 383 KLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSI------KP 436

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
           ++ +YS ++D  C    V+KA+ +F  M  RG+   V     +I+GFC     +E   LF
Sbjct: 437 DVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLF 496

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
            EM      P+++T++ +ID LCK G+I+ A  L++ M  RG  PD  TYNS++D  C  
Sbjct: 497 KEMHHKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDALCKK 556

Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
             +D A  +   +  +G +  + +Y IL+ G C+   +E+A  ++  ++  G    V  Y
Sbjct: 557 HHVDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYNLDVYAY 616

Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
             ++ G    G    A  L  +M+     PD  TY I+I  L + +    A KL   + M
Sbjct: 617 TVMIQGFCDKGLFDEALALLSKMEENGCIPDAKTYEIIILSLFEKDENDMAEKLLREMIM 676



 Score =  169 bits (427), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 100/340 (29%), Positives = 176/340 (51%), Gaps = 13/340 (3%)

Query: 55  NLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLN 114
           ++N+A   +      +  P + ++N L             I  + K+ S  ++PD  T +
Sbjct: 348 HVNDAFDLYSEKVSKRIFPDVFTYNALISGFCIVGKLKDAIDLFNKMTSKNIIPDVYTFS 407

Query: 115 ILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRL 174
           IL++       G C +  IKEA  +   M+   ++PDV+TY +L++G+C    ++ A  +
Sbjct: 408 ILVD-------GFCKDGNIKEAKNVLAMMMKQSIKPDVVTYSSLMDGYCLVNEVNKAESI 460

Query: 175 HKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTL 234
              M       G+ +  N+ SY+I+I+  CK  +VD+A +LF EM  + I P V+  ++L
Sbjct: 461 FNTMS----HRGVTA--NVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSSL 514

Query: 235 IHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGL 294
           I G C +G       L  EM   G +P+++T+N ++D LCK   +++A  LL  +  +G+
Sbjct: 515 IDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDALCKKHHVDKAITLLTKLKGQGI 574

Query: 295 NPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMS 354
            PD  TY  L+ G C  G+++ AR++F  +  KG    V +Y ++I G+C     +EA++
Sbjct: 575 RPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTVMIQGFCDKGLFDEALA 634

Query: 355 LYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEM 394
           L  ++  NG      TY  ++  LF+  +   A+KL  EM
Sbjct: 635 LLSKMEENGCIPDAKTYEIIILSLFEKDENDMAEKLLREM 674



 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 65/239 (27%), Positives = 122/239 (51%), Gaps = 13/239 (5%)

Query: 56  LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNI 115
           +N+A   F  M+H   +  + S+N++     K +  D  +  ++++    + PD +T + 
Sbjct: 454 VNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSS 513

Query: 116 LINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLH 175
           LI+       GLC   RI  A  L   M   G +PD+ITY ++++  C+  ++  A+ L 
Sbjct: 514 LID-------GLCKSGRISYALELVDEMHYRGQQPDIITYNSILDALCKKHHVDKAITLL 566

Query: 176 KKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLI 235
            K+       G   + ++ +Y+I++  LC+ G ++ A+++F ++  +G N  V   T +I
Sbjct: 567 TKL------KGQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTVMI 620

Query: 236 HGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGL 294
            GFC  G ++E   L  +M + G  P+  T+ ++I  L +  + + A  LL  MI RGL
Sbjct: 621 QGFCDKGLFDEALALLSKMEENGCIPDAKTYEIIILSLFEKDENDMAEKLLREMIMRGL 679



 Score = 85.9 bits (211), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 57/170 (33%), Positives = 80/170 (47%), Gaps = 6/170 (3%)

Query: 400 EPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWE 459
           EPD  T    I G C    + +A+     +    F      +  LI+GLCK G    A E
Sbjct: 260 EPDTITLTTFIKGFCLKGQIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVGETKAALE 319

Query: 460 LFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEK--NGCAPNVVTFNTLMHG 517
           L  +   K + P VV Y+ +I G+C+   +  A D  LY EK      P+V T+N L+ G
Sbjct: 320 LLRRNDGKLVQPDVVMYNTIIDGMCKDKHVNDAFD--LYSEKVSKRIFPDVFTYNALISG 377

Query: 518 FLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAV 567
           F    K    ++L +KM    +N++PD  TFSI+VD   KD    E   V
Sbjct: 378 FCIVGKLKDAIDLFNKMTS--KNIIPDVYTFSILVDGFCKDGNIKEAKNV 425



 Score = 85.9 bits (211), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 68/216 (31%), Positives = 102/216 (47%), Gaps = 20/216 (9%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CKSG I+   A      M +    P I ++N +  A+ K  H D  I+   KL   G+ P
Sbjct: 519 CKSGRISY--ALELVDEMHYRGQQPDIITYNSILDALCKKHHVDKAITLLTKLKGQGIRP 576

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           D  T  IL+       +GLC   ++++A  +F++++  G   DV  Y  +I GFC  G  
Sbjct: 577 DMNTYTILV-------KGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTVMIQGFCDKGLF 629

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
             AL L  KM     ENG I      +Y III SL ++   D A++L  EM  RG+  A+
Sbjct: 630 DEALALLSKM----EENGCIPDAK--TYEIIILSLFEKDENDMAEKLLREMIMRGLLVAL 683

Query: 229 ---VVCTTLIHGFCCA--GNWEEVNGLFIEMLDLGP 259
              +V + L+    CA    W     L + +++L P
Sbjct: 684 TDDLVASILVRRTWCARLALWVTFISLLLRVIELKP 719


>gi|46091165|dbj|BAD13711.1| PPR protein [Oryza sativa Indica Group]
          Length = 794

 Score =  293 bits (749), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 183/528 (34%), Positives = 279/528 (52%), Gaps = 52/528 (9%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
           P   ++N +      +      I F +K+ S G+ PD +T N L++        LC   R
Sbjct: 267 PNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDY-------LCKNGR 319

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
             EA  +F +M   G++P++ TYGTL+ G+   G L     L   MV     NG+    N
Sbjct: 320 CTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMV----RNGI--HPN 373

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVV----------------------- 229
            + +SI+I +  K+G VD+A  +F +M+ +G+NP  V                       
Sbjct: 374 HYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFE 433

Query: 230 ------------VCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGG 277
                       V  +LIH  C    W++   L +EMLD G   + + FN +ID  CK G
Sbjct: 434 QMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEG 493

Query: 278 KINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYN 337
           ++ E+  L +LM++ G+ PD  TY++L+DGYCL G++D A ++  SM S G K   V+YN
Sbjct: 494 RVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYN 553

Query: 338 ILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLY 397
            LINGYCKI  +E+A+ L+R++ S+GV   +ITYN +L GLFQ  +   A++L+  +   
Sbjct: 554 TLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITES 613

Query: 398 NVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNA 457
             + +LSTYNI++ GLCKNN   EA+++F  L +   +     FN +I  L K GR D A
Sbjct: 614 GTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEA 673

Query: 458 WELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHG 517
            +LF  L   GLVP V TYS+M   L  +G LE+ +D  L ME+NGC  N    N+++  
Sbjct: 674 KDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRK 733

Query: 518 FLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLA--KDEKYHE 563
            LQ    ++    L  + E   +L  + +T S+ +DLL+  K ++YH 
Sbjct: 734 LLQRGDITRAGTYLFMIDEKHFSL--EASTASLFLDLLSGGKYQEYHR 779



 Score =  243 bits (619), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 164/562 (29%), Positives = 275/562 (48%), Gaps = 55/562 (9%)

Query: 80  LLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWL 139
           +L G  A  R  DA+    R++  +G +P+  + NIL+       +GLC +NR +EA  L
Sbjct: 132 MLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILL-------KGLCDDNRSQEALEL 184

Query: 140 FKNMIAFG--VRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYS 197
            + M   G    PDV++Y T+INGF + G+L  A   + +M+    + G++   N+ +YS
Sbjct: 185 LQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEML----DRGILP--NVVTYS 238

Query: 198 IIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDL 257
            II +LCK   +DKA E+   M   G+ P      +++HG+C +G  +E  G   +M   
Sbjct: 239 SIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSD 298

Query: 258 GPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYC----LV-- 311
           G  P+++T+N ++D LCK G+  EA  + + M +RGL P+  TY +L+ GY     LV  
Sbjct: 299 GVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEM 358

Query: 312 -----------------------------GRIDTAREIFLSMHSKGCKHTVVSYNILING 342
                                        G++D A  +F  M  +G     V+Y  +I  
Sbjct: 359 HGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGI 418

Query: 343 YCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPD 402
            CK   VE+AM  + Q+I   +    I YN+L+  L    +   A++L  EM    +  D
Sbjct: 419 LCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLD 478

Query: 403 LSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFH 462
              +N +ID  CK   V E+ KLF ++     +  I  ++ LIDG C AG++D A +L  
Sbjct: 479 TIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLA 538

Query: 463 KLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNN 522
            +   G+ P  VTY+ +I+G C+  ++E A      ME +G +P+++T+N ++ G  Q  
Sbjct: 539 SMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTR 598

Query: 523 KTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKSSYRACLYVTIFQ 582
           +T+   EL   + E    L  + +T++I++  L K+    E   + ++    CL     +
Sbjct: 599 RTAAAKELYVGITESGTQL--ELSTYNIILHGLCKNNLTDEALRMFQN---LCLTDLQLE 653

Query: 583 PSSLGSMIGCTVRLMPQPEMSD 604
             +   MIG  +++    E  D
Sbjct: 654 TRTFNIMIGALLKVGRNDEAKD 675



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 145/539 (26%), Positives = 253/539 (46%), Gaps = 53/539 (9%)

Query: 70  QPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCV 129
           + +P + ++ +L G+       D   +    ++  G + D +    ++       +GLC 
Sbjct: 86  EVTPNLCTYGILMGSCCCAGRLDLGFAALGNVIKKGFIVDAIAFTPML-------KGLCA 138

Query: 130 ENRIKEA-TWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLI 188
           + R  +A   + + M   G  P+V +Y  L+ G C       AL L + M     ++G  
Sbjct: 139 DKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDDNRSQEALELLQMMP----DDGGD 194

Query: 189 SKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVN 248
              ++ SY+ +I+   KEG +DKA   + EM  RGI P VV  +++I   C A   ++  
Sbjct: 195 CPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAM 254

Query: 249 GLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGY 308
            +   M+  G  PN  T+N ++   C  G+  EA G L+ M   G+ PD  TYNSLMD  
Sbjct: 255 EVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYL 314

Query: 309 CLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTV 368
           C  GR   AR++F SM  +G K  + +Y  L+ GY     + E   L   ++ NG+    
Sbjct: 315 CKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNH 374

Query: 369 ITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLF-H 427
             ++ L+    + G+   A  +F +M+   + PD  TY  +I  LCK+  V++A++ F  
Sbjct: 375 YVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQ 434

Query: 428 MLE-------------------MNKFEFGIEI---------------FNCLIDGLCKAGR 453
           M++                    +K++   E+               FN +ID  CK GR
Sbjct: 435 MIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGR 494

Query: 454 LDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNT 513
           +  + +LF  + + G+ P ++TYS +I G C  GK+++A   L  M   G  P+ VT+NT
Sbjct: 495 VIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNT 554

Query: 514 LMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKSSY 572
           L++G+ + ++    + L  +M      + PD  T++I++  L +  +    +A +K  Y
Sbjct: 555 LINGYCKISRMEDALVLFREMESS--GVSPDIITYNIILQGLFQTRR----TAAAKELY 607


>gi|297836911|ref|XP_002886337.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
 gi|297332178|gb|EFH62596.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
          Length = 1059

 Score =  293 bits (749), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 167/483 (34%), Positives = 262/483 (54%), Gaps = 17/483 (3%)

Query: 54   INLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTL 113
            I  ++A   F  M   +P P I  F  +  A+AK   +D VI  + K+ ++G+  D  + 
Sbjct: 594  IKFDDAFGLFCEMLQSRPIPSIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSF 653

Query: 114  NILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALR 173
             ILI+CF       C  +R   A  L   M+  G +P ++T G+L+NGFC+      A+ 
Sbjct: 654  TILIHCF-------CRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVS 706

Query: 174  LHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTT 233
            L   M     E GL  + N+  Y+ +I+ LCK   ++ A E+F  M+ +GI    V   T
Sbjct: 707  LVDSMA----ELGL--EPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNT 760

Query: 234  LIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRG 293
            LI G C +G W +   L  +M+     PN++ F  +ID   K G + EA  L + MI+R 
Sbjct: 761  LISGLCNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRS 820

Query: 294  LNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAM 353
            ++P+  TYNSL++G+C+ GR+  A+ +F  M SKGC   VV+YN LI G+CK   VE+ M
Sbjct: 821  VHPNILTYNSLINGFCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGM 880

Query: 354  SLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGL 413
             L+ ++   G+     TYNTL+ G  QAG+   AQK+F+ M    V PD+ TYNIL+D L
Sbjct: 881  KLFCEMTHQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCL 940

Query: 414  CKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTV 473
            C N  +++A+ +   L+ N+ +  I  +N +I G+C+  ++  AW LF  L +KG+    
Sbjct: 941  CNNGKIEKALVMVEDLQKNQMDVDIITYNIIIQGMCRNDKVKEAWCLFRSLTRKGVKLDA 1000

Query: 474  VTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHK 533
            + Y  MI GLCR G   +A+     M+++G  P+   ++      L+++ TS   EL+  
Sbjct: 1001 IAYITMISGLCRNGLRREADKLCTRMKEDGFMPSERIYDET----LRDHYTSLSAELIKA 1056

Query: 534  MAE 536
            + E
Sbjct: 1057 VHE 1059



 Score =  291 bits (745), Expect = 7e-76,   Method: Compositional matrix adjust.
 Identities = 164/461 (35%), Positives = 249/461 (54%), Gaps = 20/461 (4%)

Query: 44  FLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVS 103
           FLH       I   +A   F  M   QP P +  F  L  A+A  R Y+ VI F +++  
Sbjct: 40  FLHS------IRFEDALDLFLEMVQSQPLPSVVDFTRLLTAIANLRRYETVIYFSQQMEL 93

Query: 104 IGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFC 163
            G+  D  +  ILI+CF       C  +R+  A  +   M+  G  P ++T+G+L++GFC
Sbjct: 94  FGISHDLYSFTILIHCF-------CRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFC 146

Query: 164 RTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRG 223
               +  A  L   MV   YE       N+  Y+ +ID LCK G V+ A EL  EM+ +G
Sbjct: 147 LRNRIHDAFSLVASMVKSGYE------PNVVVYNTLIDCLCKNGDVNIALELLNEMEKKG 200

Query: 224 -INPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEA 282
            +   +V   TL+ G C +G W +   +  +M      P++ TF  +ID   K G ++EA
Sbjct: 201 RLAADLVTYNTLLTGLCYSGEWRQAARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEA 260

Query: 283 NGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILING 342
             L + M+Q  + P+  TYNSL++G C+ GR+  A++ F  M SKGC   VV+YN LING
Sbjct: 261 QELYKQMLQSSIGPNTVTYNSLINGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLING 320

Query: 343 YCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPD 402
           +CK   VE+ M L++++   G+     TYNTL+ G  Q G+   A+ +F  M    V PD
Sbjct: 321 FCKSRRVEDGMKLFQRMYREGLVGDTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPD 380

Query: 403 LSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFH 462
           + T+ IL+ GLC N  +  A+  F+ +   +   GI  +N +I GLCKA +++ AWELF 
Sbjct: 381 IITHCILLHGLCVNGEIGSAMVKFNDMRSGEKYLGIVAYNIMIHGLCKADKVEEAWELFC 440

Query: 463 KLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNG 503
           +LP +G+ P   TY+IMI GLC+ G   +A++    M+++G
Sbjct: 441 RLPVEGVKPDARTYTIMILGLCKNGPRREADELFRRMKEDG 481



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 124/441 (28%), Positives = 208/441 (47%), Gaps = 42/441 (9%)

Query: 132 RIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKT 191
           R ++A  LF  M+     P V+ +  L+            +   ++M     E   IS  
Sbjct: 45  RFEDALDLFLEMVQSQPLPSVVDFTRLLTAIANLRRYETVIYFSQQM-----ELFGISH- 98

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
           +++S++I+I   C+   +  A  +  +M   G +P++V   +L+HGFC      +   L 
Sbjct: 99  DLYSFTILIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLV 158

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRG-LNPDRFTYNSLMDGYCL 310
             M+  G  PN++ +N +IDCLCK G +N A  LL  M ++G L  D  TYN+L+ G C 
Sbjct: 159 ASMVKSGYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCY 218

Query: 311 VGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVIT 370
            G    A  I   M  +     V ++  LI+ + K  N++EA  LY+Q++ + +    +T
Sbjct: 219 SGEWRQAARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVT 278

Query: 371 YNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLE 430
           YN+L++GL   G+  +A+K FD M      P++ TYN LI+G CK+  V++ +KLF  + 
Sbjct: 279 YNSLINGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMY 338

Query: 431 MNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVT--------------- 475
                     +N LI G C+ G+L  A ++F  +   G+ P ++T               
Sbjct: 339 REGLVGDTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCILLHGLCVNGEIG 398

Query: 476 --------------------YSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLM 515
                               Y+IMIHGLC+  K+E+A +    +   G  P+  T+  ++
Sbjct: 399 SAMVKFNDMRSGEKYLGIVAYNIMIHGLCKADKVEEAWELFCRLPVEGVKPDARTYTIMI 458

Query: 516 HGFLQNNKTSKVVELLHKMAE 536
            G  +N    +  EL  +M E
Sbjct: 459 LGLCKNGPRREADELFRRMKE 479



 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 108/382 (28%), Positives = 196/382 (51%), Gaps = 2/382 (0%)

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
           +I  ++ ++ ++ K    D    LF +M+  GI+  +   T LIH FC    +     L 
Sbjct: 614 SIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFTILIHCFCRCSRFSLALALL 673

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
            +M+ LG +P+++T   +++  C+G +  EA  L++ M + GL P+   YN++++G C  
Sbjct: 674 GKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAELGLEPNVVIYNTVINGLCKN 733

Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
             ++ A EIF  M  KG     V+YN LI+G C      +A  L R ++   +   VI +
Sbjct: 734 RDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDAARLLRDMVKRKIDPNVIFF 793

Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
             L+    + G    A+ L+ EM   +V P++ TYN LI+G C    + +A  +F ++  
Sbjct: 794 TALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLINGFCIQGRLGDAKHMFDLMVS 853

Query: 432 NKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEK 491
                 +  +N LI G CK+ R+++  +LF ++  +GLV    TY+ +IHG C+ GKL  
Sbjct: 854 KGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGDAFTYNTLIHGYCQAGKLNV 913

Query: 492 ANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIV 551
           A      M   G  P++VT+N L+     N K  K + ++  + + + ++  D  T++I+
Sbjct: 914 AQKVFNRMVDCGVPPDIVTYNILLDCLCNNGKIEKALVMVEDLQKNQMDV--DIITYNII 971

Query: 552 VDLLAKDEKYHECSAVSKSSYR 573
           +  + +++K  E   + +S  R
Sbjct: 972 IQGMCRNDKVKEAWCLFRSLTR 993



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 115/414 (27%), Positives = 194/414 (46%), Gaps = 23/414 (5%)

Query: 158 LINGFCRTGNLSVALRLHKKMVSG-------DYENGLISKTNIFSYSIIIDSLCKEGLVD 210
           L  GF  +     AL L  +MV         D+   L +  N+  Y  +I          
Sbjct: 36  LRTGFLHSIRFEDALDLFLEMVQSQPLPSVVDFTRLLTAIANLRRYETVI-------YFS 88

Query: 211 KAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMI 270
           +  ELF      GI+  +   T LIH FC          +  +M+ LG  P+++TF  ++
Sbjct: 89  QQMELF------GISHDLYSFTILIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLL 142

Query: 271 DCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKG-C 329
              C   +I++A  L+  M++ G  P+   YN+L+D  C  G ++ A E+   M  KG  
Sbjct: 143 HGFCLRNRIHDAFSLVASMVKSGYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRL 202

Query: 330 KHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQK 389
              +V+YN L+ G C      +A  + R +    +   V T+  L+    + G    AQ+
Sbjct: 203 AADLVTYNTLLTGLCYSGEWRQAARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQE 262

Query: 390 LFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLC 449
           L+ +M   ++ P+  TYN LI+GLC +  +  A K F ++        +  +N LI+G C
Sbjct: 263 LYKQMLQSSIGPNTVTYNSLINGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFC 322

Query: 450 KAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVV 509
           K+ R+++  +LF ++ ++GLV    TY+ +IHG C+ GKL  A D   +M   G  P+++
Sbjct: 323 KSRRVEDGMKLFQRMYREGLVGDTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDII 382

Query: 510 TFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
           T   L+HG   N +    +   + M   E+ L      ++I++  L K +K  E
Sbjct: 383 THCILLHGLCVNGEIGSAMVKFNDMRSGEKYL--GIVAYNIMIHGLCKADKVEE 434


>gi|449458524|ref|XP_004146997.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Cucumis sativus]
          Length = 481

 Score =  292 bits (748), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 166/415 (40%), Positives = 244/415 (58%), Gaps = 15/415 (3%)

Query: 135 EATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIF 194
           +A   F  M+     P + ++  L+ G  +  + S    L+ KM       GL    ++F
Sbjct: 73  QAFHFFDLMMRSHPIPPISSFNRLLGGLAKINHYSQLFSLYNKMRLA----GL--SPDLF 126

Query: 195 SYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLI---HGFCCAGNWEEVNGLF 251
           + +I+ + LC    V +       +  RG  P +V   TLI   +G C  G+ +E   +F
Sbjct: 127 TLNILANCLCNLNRVSEGLAAMTGILRRGYIPDIVTYNTLIKGLYGLCKVGHEDEAKEIF 186

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
            EM   G  PN+++++ ++   C  GK+ E+  L   M+ +G+ P+   +N L+D  C  
Sbjct: 187 EEMKAQGMIPNVISYSSLVHGFCCAGKLEESKRLFNEMVDQGVQPNLVQFNVLIDILCKE 246

Query: 312 GRI---DTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTV 368
           G+I    +AR++FLSM SKGC+H  +SY ILINGYCKI  VEEAM+LY ++   G R  V
Sbjct: 247 GKIGDLSSARKLFLSMPSKGCEHNEISYTILINGYCKIWKVEEAMNLYNEMPQVGKRPNV 306

Query: 369 ITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHM 428
            TY+TLL+GL Q G+ G A KLF  MK   +  D   Y I +DGLCKN  + EA++LF+ 
Sbjct: 307 KTYSTLLTGLLQTGKVGDANKLFGVMKASGISVDSCIYVIFLDGLCKNGVLFEAMELFNE 366

Query: 429 LEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGK 488
           L+   F+   E ++ LIDGLCKAG+++ AWE F +L Q+GL P VVT +IMIHG CR  +
Sbjct: 367 LKSYNFKLDFESYSRLIDGLCKAGKVEIAWEFFKQLSQEGLQPNVVTCNIMIHGFCRVEQ 426

Query: 489 LEKANDFLLYMEK---NGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERN 540
           ++KAN     MEK   NGC P+++T+NTL+ GF ++NK  +VV LLHKM +  R+
Sbjct: 427 VDKANILFEKMEKMEENGCTPDIITYNTLLRGFCESNKLEEVVNLLHKMFKRMRH 481



 Score =  237 bits (604), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 157/463 (33%), Positives = 232/463 (50%), Gaps = 49/463 (10%)

Query: 9   CLFSSETVSKVKLSSLFKSPRQIAAVS-----SPETQLNEFLHENCKSGIINLNEARYFF 63
           C  SS   S V  +S    P  I         S + +L+ FL  NCK+G I++ +A +FF
Sbjct: 20  CTLSSPIPSSVPQTSSTNHPNPILLAFNDRGISFQHRLSSFL-RNCKTGNIDVIQAFHFF 78

Query: 64  GYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNK 123
             M    P PPISSFN L G +AK  HY  + S Y K+   GL PD  TLNIL NC  N 
Sbjct: 79  DLMMRSHPIPPISSFNRLLGGLAKINHYSQLFSLYNKMRLAGLSPDLFTLNILANCLCNL 138

Query: 124 ER-------------------------------GLCVENRIKEATWLFKNMIAFGVRPDV 152
            R                               GLC      EA  +F+ M A G+ P+V
Sbjct: 139 NRVSEGLAAMTGILRRGYIPDIVTYNTLIKGLYGLCKVGHEDEAKEIFEEMKAQGMIPNV 198

Query: 153 ITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLV--- 209
           I+Y +L++GFC  G L  + RL  +MV    + G+  + N+  ++++ID LCKEG +   
Sbjct: 199 ISYSSLVHGFCCAGKLEESKRLFNEMV----DQGV--QPNLVQFNVLIDILCKEGKIGDL 252

Query: 210 DKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVM 269
             A++LFL M  +G     +  T LI+G+C     EE   L+ EM  +G RPN+ T++ +
Sbjct: 253 SSARKLFLSMPSKGCEHNEISYTILINGYCKIWKVEEAMNLYNEMPQVGKRPNVKTYSTL 312

Query: 270 IDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGC 329
           +  L + GK+ +AN L  +M   G++ D   Y   +DG C  G +  A E+F  + S   
Sbjct: 313 LTGLLQTGKVGDANKLFGVMKASGISVDSCIYVIFLDGLCKNGVLFEAMELFNELKSYNF 372

Query: 330 KHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQK 389
           K    SY+ LI+G CK   VE A   ++Q+   G++  V+T N ++ G  +  Q   A  
Sbjct: 373 KLDFESYSRLIDGLCKAGKVEIAWEFFKQLSQEGLQPNVVTCNIMIHGFCRVEQVDKANI 432

Query: 390 LFDEMKLYN---VEPDLSTYNILIDGLCKNNCVQEAVKLFHML 429
           LF++M+        PD+ TYN L+ G C++N ++E V L H +
Sbjct: 433 LFEKMEKMEENGCTPDIITYNTLLRGFCESNKLEEVVNLLHKM 475



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 53/209 (25%), Positives = 104/209 (49%), Gaps = 10/209 (4%)

Query: 369 ITYNTLLSGLFQAGQAG-----YAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAV 423
           I++   LS   +  + G      A   FD M   +  P +S++N L+ GL K N   +  
Sbjct: 51  ISFQHRLSSFLRNCKTGNIDVIQAFHFFDLMMRSHPIPPISSFNRLLGGLAKINHYSQLF 110

Query: 424 KLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMI--- 480
            L++ + +      +   N L + LC   R+         + ++G +P +VTY+ +I   
Sbjct: 111 SLYNKMRLAGLSPDLFTLNILANCLCNLNRVSEGLAAMTGILRRGYIPDIVTYNTLIKGL 170

Query: 481 HGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERN 540
           +GLC+ G  ++A +    M+  G  PNV+++++L+HGF    K  +   L ++M   ++ 
Sbjct: 171 YGLCKVGHEDEAKEIFEEMKAQGMIPNVISYSSLVHGFCCAGKLEESKRLFNEMV--DQG 228

Query: 541 LVPDDTTFSIVVDLLAKDEKYHECSAVSK 569
           + P+   F++++D+L K+ K  + S+  K
Sbjct: 229 VQPNLVQFNVLIDILCKEGKIGDLSSARK 257


>gi|356561679|ref|XP_003549107.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g12775, mitochondrial-like [Glycine max]
          Length = 750

 Score =  292 bits (747), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 179/575 (31%), Positives = 285/575 (49%), Gaps = 59/575 (10%)

Query: 63  FGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGN 122
           F  M  M+P PP   FN +  ++  N+HY  VIS ++K  S G  PD  TLNIL+NCF +
Sbjct: 51  FDRMLLMRPPPPTFHFNYILSSLVNNKHYPTVISLFKKFESNGATPDLCTLNILMNCFCH 110

Query: 123 KE----------------------------RGLCVENRIKEATWLFKNMIAFGVRPDVIT 154
                                         +GLC    IK+A +    ++A G + + ++
Sbjct: 111 LTHITFAFSVLANILKRGYHPNAITLNTLIKGLCFRGEIKKALYFHDQVVAQGFQLNQVS 170

Query: 155 YGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKE 214
           Y TLING C+TG      RL +K+       G   K ++  Y+ II SLCK  L+  A +
Sbjct: 171 YRTLINGLCKTGETKAVARLLRKL------EGHSVKPDVVMYNTIIHSLCKNKLLGDACD 224

Query: 215 LFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLC 274
           L+ EM  +GI+P VV    L++GFC  G+ +E   L  EM      P++ TFN +ID L 
Sbjct: 225 LYSEMIVKGISPNVVTYNALVYGFCIMGHLKEAFSLLNEMKLKNINPDVCTFNTLIDALG 284

Query: 275 KGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVV 334
           K GK+  A  +L +M++  + PD  TYNSL+DGY  + ++  A+ +F SM   G    V 
Sbjct: 285 KEGKMKAAKIVLAVMMKACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVR 344

Query: 335 SYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEM 394
           +Y  +I+G CK   V+EAMSL+ ++    +   ++TY +L+ GL +      A  L  +M
Sbjct: 345 TYTTMIDGLCKEKMVDEAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLERAIALCKKM 404

Query: 395 KLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRL 454
           K   ++PD+ +Y IL+D LCK   ++ A + F  L +  +   ++ +N +I+GLCKA   
Sbjct: 405 KEQGIQPDVYSYTILLDALCKGGRLENAKEFFQRLLVKGYHLNVQTYNVMINGLCKADLF 464

Query: 455 DNAWELFHKLPQKGLVPTVVTYSIMIHGL-----------------------CRKGKLEK 491
             A +L  K+  KG +P  +T+  +I  L                        RK +L++
Sbjct: 465 GEAMDLKSKMEGKGCMPDAITFKTIICALFEKDENDKAEKILREMIARGLQEARKVRLKE 524

Query: 492 ANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIV 551
           A   L  M K    P+VVT+ TLM G+   N+      + + MA  +  + P+   ++I+
Sbjct: 525 AKIVLAVMTKACIKPDVVTYGTLMDGYFLVNELKHAKYVFYSMA--QMGVTPNVQCYTIM 582

Query: 552 VDLLAKDEKYHECSAVSKSSYRACLYVTIFQPSSL 586
           +D L K +   E  ++ +      ++  I   +SL
Sbjct: 583 IDGLCKKKTVDEAMSLFEEMKHKNMFPNIVTYTSL 617



 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 148/472 (31%), Positives = 239/472 (50%), Gaps = 38/472 (8%)

Query: 56  LNEARYFFGYMTHMQPSPPISSFN-LLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLN 114
           +  A+     M      P + ++N L+ G    N+  +A   FY  +   G+ P+  T  
Sbjct: 289 MKAAKIVLAVMMKACIKPDVVTYNSLIDGYFFLNKVKNAKYVFY-SMAQSGVTPNVRTYT 347

Query: 115 ILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRL 174
            +I+       GLC E  + EA  LF+ M    + PD++TY +LI+G C+  +L  A+ L
Sbjct: 348 TMID-------GLCKEKMVDEAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLERAIAL 400

Query: 175 HKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTL 234
            KKM     E G+  + +++SY+I++D+LCK G ++ AKE F  +  +G +  V     +
Sbjct: 401 CKKM----KEQGI--QPDVYSYTILLDALCKGGRLENAKEFFQRLLVKGYHLNVQTYNVM 454

Query: 235 IHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGL 294
           I+G C A  + E   L  +M   G  P+ +TF  +I  L +  + ++A  +L  MI RGL
Sbjct: 455 INGLCKADLFGEAMDLKSKMEGKGCMPDAITFKTIICALFEKDENDKAEKILREMIARGL 514

Query: 295 N-----------------------PDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKH 331
                                   PD  TY +LMDGY LV  +  A+ +F SM   G   
Sbjct: 515 QEARKVRLKEAKIVLAVMTKACIKPDVVTYGTLMDGYFLVNELKHAKYVFYSMAQMGVTP 574

Query: 332 TVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLF 391
            V  Y I+I+G CK   V+EAMSL+ ++    +   ++TY +L+  L +      A  L 
Sbjct: 575 NVQCYTIMIDGLCKKKTVDEAMSLFEEMKHKNMFPNIVTYTSLIDALCKNHHLERAIALL 634

Query: 392 DEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKA 451
            EMK + ++PD+ +Y IL+DGLCK+  ++ A ++F  L +  +   ++++  +I+ LCKA
Sbjct: 635 KEMKEHGIQPDVYSYTILLDGLCKSGRLEGAKEIFQRLLVKGYHLNVQVYTAMINELCKA 694

Query: 452 GRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNG 503
           G  D A +L  K+  KG +P  VT+ I+I  L  K + +KA   L  M   G
Sbjct: 695 GLFDEALDLQXKMEDKGCMPDAVTFDIIIWALFEKDENDKAEKILXEMIARG 746



 Score =  228 bits (582), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 148/542 (27%), Positives = 262/542 (48%), Gaps = 41/542 (7%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
           N  +H  CK+ +  L +A   +  M     SP + ++N L        H     S   ++
Sbjct: 207 NTIIHSLCKNKL--LGDACDLYSEMIVKGISPNVVTYNALVYGFCIMGHLKEAFSLLNEM 264

Query: 102 VSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLING 161
               + PD  T N LI+  G        E ++K A  +   M+   ++PDV+TY +LI+G
Sbjct: 265 KLKNINPDVCTFNTLIDALGK-------EGKMKAAKIVLAVMMKACIKPDVVTYNSLIDG 317

Query: 162 FCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKG 221
           +     +  A  +   M     ++G+    N+ +Y+ +ID LCKE +VD+A  LF EMK 
Sbjct: 318 YFFLNKVKNAKYVFYSMA----QSGVTP--NVRTYTTMIDGLCKEKMVDEAMSLFEEMKY 371

Query: 222 RGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINE 281
           + + P +V  T+LI G C   + E    L  +M + G +P++ ++ +++D LCKGG++  
Sbjct: 372 KNMIPDIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLEN 431

Query: 282 ANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILIN 341
           A    + ++ +G + +  TYN +++G C       A ++   M  KGC    +++  +I 
Sbjct: 432 AKEFFQRLLVKGYHLNVQTYNVMINGLCKADLFGEAMDLKSKMEGKGCMPDAITFKTIIC 491

Query: 342 GYCKILNVEEAMSLYRQIISNGVRQT-----------------------VITYNTLLSGL 378
              +    ++A  + R++I+ G+++                        V+TY TL+ G 
Sbjct: 492 ALFEKDENDKAEKILREMIARGLQEARKVRLKEAKIVLAVMTKACIKPDVVTYGTLMDGY 551

Query: 379 FQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGI 438
           F   +  +A+ +F  M    V P++  Y I+IDGLCK   V EA+ LF  ++       I
Sbjct: 552 FLVNELKHAKYVFYSMAQMGVTPNVQCYTIMIDGLCKKKTVDEAMSLFEEMKHKNMFPNI 611

Query: 439 EIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLY 498
             +  LID LCK   L+ A  L  ++ + G+ P V +Y+I++ GLC+ G+LE A +    
Sbjct: 612 VTYTSLIDALCKNHHLERAIALLKEMKEHGIQPDVYSYTILLDGLCKSGRLEGAKEIFQR 671

Query: 499 MEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVV-DLLAK 557
           +   G   NV  +  +++   +     + ++L  KM   ++  +PD  TF I++  L  K
Sbjct: 672 LLVKGYHLNVQVYTAMINELCKAGLFDEALDLQXKME--DKGCMPDAVTFDIIIWALFEK 729

Query: 558 DE 559
           DE
Sbjct: 730 DE 731



 Score =  228 bits (582), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 158/527 (29%), Positives = 257/527 (48%), Gaps = 38/527 (7%)

Query: 31  IAAVSSPETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRH 90
           +  +S      N  ++  C  G  +L EA      M     +P + +FN L  A+ K   
Sbjct: 231 VKGISPNVVTYNALVYGFCIMG--HLKEAFSLLNEMKLKNINPDVCTFNTLIDALGKEGK 288

Query: 91  YDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRP 150
             A       ++   + PD +T N LI+       G    N++K A ++F +M   GV P
Sbjct: 289 MKAAKIVLAVMMKACIKPDVVTYNSLID-------GYFFLNKVKNAKYVFYSMAQSGVTP 341

Query: 151 DVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVD 210
           +V TY T+I+G C+   +  A+ L ++M    Y+N +    +I +Y+ +ID LCK   ++
Sbjct: 342 NVRTYTTMIDGLCKEKMVDEAMSLFEEM---KYKNMI---PDIVTYTSLIDGLCKNHHLE 395

Query: 211 KAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMI 270
           +A  L  +MK +GI P V   T L+   C  G  E     F  +L  G   N+ T+NVMI
Sbjct: 396 RAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKEFFQRLLVKGYHLNVQTYNVMI 455

Query: 271 DCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLM---------DGYCLVGRIDTAR--- 318
           + LCK     EA  L   M  +G  PD  T+ +++         D    + R   AR   
Sbjct: 456 NGLCKADLFGEAMDLKSKMEGKGCMPDAITFKTIICALFEKDENDKAEKILREMIARGLQ 515

Query: 319 ----------EIFLSMHSKGC-KHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQT 367
                     +I L++ +K C K  VV+Y  L++GY  +  ++ A  ++  +   GV   
Sbjct: 516 EARKVRLKEAKIVLAVMTKACIKPDVVTYGTLMDGYFLVNELKHAKYVFYSMAQMGVTPN 575

Query: 368 VITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFH 427
           V  Y  ++ GL +      A  LF+EMK  N+ P++ TY  LID LCKN+ ++ A+ L  
Sbjct: 576 VQCYTIMIDGLCKKKTVDEAMSLFEEMKHKNMFPNIVTYTSLIDALCKNHHLERAIALLK 635

Query: 428 MLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKG 487
            ++ +  +  +  +  L+DGLCK+GRL+ A E+F +L  KG    V  Y+ MI+ LC+ G
Sbjct: 636 EMKEHGIQPDVYSYTILLDGLCKSGRLEGAKEIFQRLLVKGYHLNVQVYTAMINELCKAG 695

Query: 488 KLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKM 534
             ++A D    ME  GC P+ VTF+ ++    + ++  K  ++L +M
Sbjct: 696 LFDEALDLQXKMEDKGCMPDAVTFDIIIWALFEKDENDKAEKILXEM 742



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 74/242 (30%), Positives = 129/242 (53%), Gaps = 15/242 (6%)

Query: 54  INLNEARYFFGYMTHMQPSPPISSF-NLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLT 112
           + L EA+     MT     P + ++  L+ G    N    A   FY  +  +G+ P+   
Sbjct: 520 VRLKEAKIVLAVMTKACIKPDVVTYGTLMDGYFLVNELKHAKYVFY-SMAQMGVTPNVQC 578

Query: 113 LNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVAL 172
             I+I+       GLC +  + EA  LF+ M    + P+++TY +LI+  C+  +L  A+
Sbjct: 579 YTIMID-------GLCKKKTVDEAMSLFEEMKHKNMFPNIVTYTSLIDALCKNHHLERAI 631

Query: 173 RLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCT 232
            L K+M     E+G+  + +++SY+I++D LCK G ++ AKE+F  +  +G +  V V T
Sbjct: 632 ALLKEM----KEHGI--QPDVYSYTILLDGLCKSGRLEGAKEIFQRLLVKGYHLNVQVYT 685

Query: 233 TLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQR 292
            +I+  C AG ++E   L  +M D G  P+ +TF+++I  L +  + ++A  +L  MI R
Sbjct: 686 AMINELCKAGLFDEALDLQXKMEDKGCMPDAVTFDIIIWALFEKDENDKAEKILXEMIAR 745

Query: 293 GL 294
           GL
Sbjct: 746 GL 747


>gi|242067341|ref|XP_002448947.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
 gi|241934790|gb|EES07935.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
          Length = 797

 Score =  291 bits (746), Expect = 5e-76,   Method: Compositional matrix adjust.
 Identities = 178/558 (31%), Positives = 284/558 (50%), Gaps = 49/558 (8%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CK+ +++  E    F  M      P   ++N L         +  V+    ++ + GL P
Sbjct: 249 CKAQVVDRAEG--VFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKP 306

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           D  T   L+N        LC   R +EA + F +MI  G++P+V  YG LI+G+   G L
Sbjct: 307 DCYTYGSLLNY-------LCNNGRCREARFFFDSMIRKGIKPNVAIYGILIHGYATKGAL 359

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFS--------------------------------- 195
           S    L   MV    ENGL    +IF+                                 
Sbjct: 360 SEMHDLLNLMV----ENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVN 415

Query: 196 YSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEML 255
           +  +ID+LCK G VD A   F +M   G+ P + V  +L++G C    WE+    + EML
Sbjct: 416 FGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEML 475

Query: 256 DLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRID 315
           + G RP+++ FN ++  LC  G++ +A  L++LM + G  PD  +Y +L+ G+CLVGRID
Sbjct: 476 NQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPDVISYTTLIGGHCLVGRID 535

Query: 316 TAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLL 375
            A +    M S G K    +YN L++GYC+   +++A  ++R+++ NG+   V+TY+T+L
Sbjct: 536 EAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTIL 595

Query: 376 SGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFE 435
            GLF   +   A++L+  M     + ++  YNI+++GL KNNCV EA KLF  L    F+
Sbjct: 596 HGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQ 655

Query: 436 FGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDF 495
             I  FN +I  L K+GR ++A  LF  +   GLVP V TY ++   L  +G LE+ +D 
Sbjct: 656 LEITTFNIMIGALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDL 715

Query: 496 LLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLL 555
              MEK+G  PN    N L+   L     ++    L K+   E+N   + +T ++++ LL
Sbjct: 716 FSAMEKSGTTPNSRMLNALVRRLLHRGDITRAGAYLSKL--DEKNFSLEASTTAMLISLL 773

Query: 556 AKDEKYHECSAVSKSSYR 573
           ++DE +H  +++ +  YR
Sbjct: 774 SRDEYHHHATSLPE-KYR 790



 Score =  259 bits (661), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 178/563 (31%), Positives = 275/563 (48%), Gaps = 46/563 (8%)

Query: 30  QIAAVSSPETQLNEFLHENCKSGIINLNEA-RYFFGYMTHMQPSPPISSFNLLFGAVAK- 87
           +++AVS+   +L   +    +SG + L++A + F G +TH +P+  I +FN L  AV++ 
Sbjct: 4   RVSAVSNRCLELERVIGSRARSGSLGLDDALKLFDGLLTHARPASII-AFNHLLTAVSRV 62

Query: 88  ------NRHYDAVISFYRKLV---SIGLLPDFLTLNILINCF---GNKE----------- 124
                     + V+S + +++   +I + PD  T +ILI CF   G  E           
Sbjct: 63  SGRRSSTTESELVVSLFNRMIRECTIKVTPDLCTYSILIGCFCRMGRLEHGFATFGLILK 122

Query: 125 --------------RGLCVENRIKEA-TWLFKNMIAFGVRPDVITYGTLINGFCRTGNLS 169
                         +GLC   R++EA   L K M   G  PDV++Y TL+ GFC      
Sbjct: 123 SGWRVNNIVINQLLKGLCDAKRLREAMDILIKRMPELGCTPDVVSYNTLLKGFCNEKRAE 182

Query: 170 VALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVV 229
            AL L   M       G     N+ SY+ +I+    EG VDKA  LFLEM  RGI P VV
Sbjct: 183 EALELLHMMAD---SQGRSCPPNVVSYATVINGFFTEGQVDKAYNLFLEMMDRGIQPNVV 239

Query: 230 VCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELM 289
             TT+I G C A   +   G+F +M+D G +P+  T+N +I      GK  E   +LE M
Sbjct: 240 TYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEM 299

Query: 290 IQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNV 349
              GL PD +TY SL++  C  GR   AR  F SM  KG K  V  Y ILI+GY     +
Sbjct: 300 SAHGLKPDCYTYGSLLNYLCNNGRCREARFFFDSMIRKGIKPNVAIYGILIHGYATKGAL 359

Query: 350 EEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNIL 409
            E   L   ++ NG+      +N + +   +      A  +F++MK   + PD+  +  L
Sbjct: 360 SEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNFGAL 419

Query: 410 IDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGL 469
           ID LCK   V +AV  F+ +        I +FN L+ GLC   + + A E + ++  +G+
Sbjct: 420 IDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGI 479

Query: 470 VPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVE 529
            P VV ++ ++  LC KG++ KA   +  ME+ G  P+V+++ TL+ G     +  +  +
Sbjct: 480 RPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPDVISYTTLIGGHCLVGRIDEAAK 539

Query: 530 LLHKMAEPERNLVPDDTTFSIVV 552
            L  M      L PD+ T++ ++
Sbjct: 540 SLDVMLSV--GLKPDEWTYNTLL 560



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 100/338 (29%), Positives = 168/338 (49%), Gaps = 6/338 (1%)

Query: 224 INPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEA- 282
           + P +   + LI  FC  G  E     F  +L  G R N +  N ++  LC   ++ EA 
Sbjct: 90  VTPDLCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLREAM 149

Query: 283 NGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSM---HSKGCKHTVVSYNIL 339
           + L++ M + G  PD  +YN+L+ G+C   R + A E+   M     + C   VVSY  +
Sbjct: 150 DILIKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYATV 209

Query: 340 INGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNV 399
           ING+     V++A +L+ +++  G++  V+TY T++ GL +A     A+ +F +M    V
Sbjct: 210 INGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGV 269

Query: 400 EPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWE 459
           +PD  TYN LI G       +E V++   +  +  +     +  L++ LC  GR   A  
Sbjct: 270 KPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARF 329

Query: 460 LFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFL 519
            F  + +KG+ P V  Y I+IHG   KG L + +D L  M +NG +P+   FN +   + 
Sbjct: 330 FFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYA 389

Query: 520 QNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAK 557
           +     + + + +KM   ++ L PD   F  ++D L K
Sbjct: 390 KKAMIDEAMHIFNKM--KQQGLSPDVVNFGALIDALCK 425



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 61/227 (26%), Positives = 116/227 (51%), Gaps = 16/227 (7%)

Query: 347 LNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAG-------QAGYAQKLFDEMK---L 396
           L +++A+ L+  ++++    ++I +N LL+ + +         ++     LF+ M     
Sbjct: 28  LGLDDALKLFDGLLTHARPASIIAFNHLLTAVSRVSGRRSSTTESELVVSLFNRMIRECT 87

Query: 397 YNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDN 456
             V PDL TY+ILI   C+   ++     F ++  + +     + N L+ GLC A RL  
Sbjct: 88  IKVTPDLCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLRE 147

Query: 457 AWE-LFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYM---EKNGCAPNVVTFN 512
           A + L  ++P+ G  P VV+Y+ ++ G C + + E+A + L  M   +   C PNVV++ 
Sbjct: 148 AMDILIKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYA 207

Query: 513 TLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDE 559
           T+++GF    +  K   L  +M   +R + P+  T++ V+D L K +
Sbjct: 208 TVINGFFTEGQVDKAYNLFLEMM--DRGIQPNVVTYTTVIDGLCKAQ 252


>gi|302780485|ref|XP_002972017.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
 gi|300160316|gb|EFJ26934.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
          Length = 1116

 Score =  291 bits (746), Expect = 6e-76,   Method: Compositional matrix adjust.
 Identities = 172/560 (30%), Positives = 288/560 (51%), Gaps = 48/560 (8%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
           N  L   C++G         F G M     +P I ++N +   + K+    A +  + +L
Sbjct: 184 NIVLQSLCRAGE-TARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELFEEL 242

Query: 102 VSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLING 161
           V  G  PD +T N LI+        LC    ++EA  L  +M +    P+V+TY  LING
Sbjct: 243 VERGHHPDVVTYNTLID-------SLCKAGDLEEARRLHGDMSSRSCVPNVVTYSVLING 295

Query: 162 FCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKG 221
            C+ G +  A  L ++M     +       NI +Y+  +D LCK+ +  +A EL   ++ 
Sbjct: 296 LCKVGRIDEARELIQEMTRKSCD----VLPNIITYNSFLDGLCKQSMTAEACELMRSLRD 351

Query: 222 RG--INPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKI 279
               ++P  V  +TLI G C  G  +E   +F +M+  G  PN++T+N +++ LCK  K+
Sbjct: 352 GSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKM 411

Query: 280 NEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNIL 339
             A+ ++E M+ +G+ PD  TY+ L+D +C   R+D A E+   M S+GC   VV++N +
Sbjct: 412 ERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSI 471

Query: 340 INGYCKILNVEEAMSLYRQI-ISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEM---- 394
           I+G CK     EA  ++  + + +G+    ITY TL+ GLF+ G+AG A+ L D M    
Sbjct: 472 IDGLCKSDRSGEAFQMFDDMALKHGLVPDKITYCTLIDGLFRTGRAGQAEALLDAMPDPD 531

Query: 395 ---------------------KLYN------VEPDLSTYNILIDGLCKNNCVQEAVKLFH 427
                                ++YN      + PD  T+NILI G CK    ++A  LF 
Sbjct: 532 TYAFNCCINGLSKLGDVSRALQVYNRMLELELVPDKVTFNILIAGACKAGNFEQASALFE 591

Query: 428 MLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKG 487
            +     +  +  F  LIDGLCKAG+++ A ++   +   G+ P VVTY+ ++HGLC+ G
Sbjct: 592 EMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSG 651

Query: 488 KLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTT 547
           ++E+A  FL  M  +GC P+ +T+ +L++   + ++T   ++L+ ++     +  PD  T
Sbjct: 652 RIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWD--PDTVT 709

Query: 548 FSIVVDLLAKDEKYHECSAV 567
           ++I+VD L K  +  +   V
Sbjct: 710 YNILVDGLWKSGQTEQAITV 729



 Score =  273 bits (698), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 149/492 (30%), Positives = 261/492 (53%), Gaps = 21/492 (4%)

Query: 71   PSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVE 130
            P P   +FN     ++K       +  Y +++ + L+PD +T NILI        G C  
Sbjct: 528  PDPDTYAFNCCINGLSKLGDVSRALQVYNRMLELELVPDKVTFNILI-------AGACKA 580

Query: 131  NRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISK 190
               ++A+ LF+ M+A  ++PDV+T+G LI+G C+ G +  A  +       D    L   
Sbjct: 581  GNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDIL------DLMGNLGVP 634

Query: 191  TNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGL 250
             N+ +Y+ ++  LCK G +++A +   EM   G  P  +   +L++  C A   ++   L
Sbjct: 635  PNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQL 694

Query: 251  FIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCL 310
              E+   G  P+ +T+N+++D L K G+  +A  +LE M+ +G +PD  TYN+L+D  C 
Sbjct: 695  VSELKSFGWDPDTVTYNILVDGLWKSGQTEQAITVLEEMVGKGHHPDVVTYNTLIDSLCK 754

Query: 311  VGRIDTAREIFLSMHSK---GCKHTVVSYNILINGYCKILNVEEAMSLYRQII--SNGVR 365
             G ++ AR +   M S+    C   VV+Y++LING CK+  ++EA  L ++++  S  V 
Sbjct: 755  AGDLEEARRLHGDMSSRVSRCCVPNVVTYSVLINGLCKVGRIDEARELIQEMMRKSCDVL 814

Query: 366  QTVITYNTLLSGLFQAGQAGYAQKLFDEMK--LYNVEPDLSTYNILIDGLCKNNCVQEAV 423
              +ITYN+ L GL +      A +L   ++     V PD  T++ LIDGLCK     EA 
Sbjct: 815  PNIITYNSFLDGLCKQSMMAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEAC 874

Query: 424  KLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGL 483
             +F  +    +   +  +N L++GLCK  +++ A  +   +  KG+ P V+TYS+++   
Sbjct: 875  NVFDDMIAGGYVPNVVTYNVLMNGLCKTDKMERAHAMIESMVDKGVTPDVITYSVLVDAF 934

Query: 484  CRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVP 543
            C+   +++A + L  M   GC PNVVTFN+++ G  +++++ +  ++   M   +  L P
Sbjct: 935  CKASHVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDQSGEAFQMFDDMTL-KHGLAP 993

Query: 544  DDTTFSIVVDLL 555
            D  T+  ++D L
Sbjct: 994  DKITYCTLIDGL 1005



 Score =  258 bits (659), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 165/586 (28%), Positives = 286/586 (48%), Gaps = 52/586 (8%)

Query: 21   LSSLFKSPR--QIAAVSSPETQLNEFLHENCKSGIINLNE---ARYFFGYMTHMQPSPPI 75
            +  LF++ R  Q  A+       + +    C +G+  L +   A   +  M  ++  P  
Sbjct: 508  IDGLFRTGRAGQAEALLDAMPDPDTYAFNCCINGLSKLGDVSRALQVYNRMLELELVPDK 567

Query: 76   SSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKE 135
             +FN+L     K  +++   + + ++V+  L PD +T   LI+       GLC   +++ 
Sbjct: 568  VTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALID-------GLCKAGQVEA 620

Query: 136  ATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFS 195
            A  +   M   GV P+V+TY  L++G C++G +  A +  ++MVS    +G +  +   +
Sbjct: 621  ARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVS----SGCVPDS--IT 674

Query: 196  YSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEML 255
            Y  ++ +LC+    D A +L  E+K  G +P  V    L+ G   +G  E+   +  EM+
Sbjct: 675  YGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGQTEQAITVLEEMV 734

Query: 256  DLGPRPNLLTFNVMIDCLCKGGKINEA---NGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
              G  P+++T+N +ID LCK G + EA   +G +   + R   P+  TY+ L++G C VG
Sbjct: 735  GKGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRVSRCCVPNVVTYSVLINGLCKVG 794

Query: 313  RIDTAREIFLSMHSKGCK--HTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQT--V 368
            RID ARE+   M  K C     +++YN  ++G CK   + EA  L R +    +R +   
Sbjct: 795  RIDEARELIQEMMRKSCDVLPNIITYNSFLDGLCKQSMMAEACELMRSLRDGSLRVSPDT 854

Query: 369  ITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHM 428
            +T++TL+ GL + GQ   A  +FD+M      P++ TYN+L++GLCK + ++ A  +   
Sbjct: 855  VTFSTLIDGLCKCGQTDEACNVFDDMIAGGYVPNVVTYNVLMNGLCKTDKMERAHAMIES 914

Query: 429  LEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGK 488
            +        +  ++ L+D  CKA  +D A EL H +  +G  P VVT++ +I GLC+  +
Sbjct: 915  MVDKGVTPDVITYSVLVDAFCKASHVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDQ 974

Query: 489  LEKANDFLLYME-KNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEP---------- 537
              +A      M  K+G AP+ +T+ TL+ G  +     +   LL  M +P          
Sbjct: 975  SGEAFQMFDDMTLKHGLAPDKITYCTLIDGLFRTGWAGQAEVLLDAMPDPDTYAFNCCIN 1034

Query: 538  ----------------ERNLVPDDTTFSIVVDLLAKDEKYHECSAV 567
                            E  LVPD  TF+I++    K   + + SA+
Sbjct: 1035 GLSKLGDVSRALHRMLELELVPDKVTFNILIAGACKAGNFEQASAL 1080



 Score =  254 bits (649), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 161/499 (32%), Positives = 259/499 (51%), Gaps = 32/499 (6%)

Query: 42   NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
            N  +H  CKSG I   EA  F   M      P   ++  L  A+ +    D  +    +L
Sbjct: 641  NALVHGLCKSGRIE--EACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSEL 698

Query: 102  VSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLING 161
             S G  PD +T NIL++       GL    + ++A  + + M+  G  PDV+TY TLI+ 
Sbjct: 699  KSFGWDPDTVTYNILVD-------GLWKSGQTEQAITVLEEMVGKGHHPDVVTYNTLIDS 751

Query: 162  FCRTGNLSVALRLHKKMVSGDYENGLISK---TNIFSYSIIIDSLCKEGLVDKAKELFLE 218
             C+ G+L  A RLH  M S       +S+    N+ +YS++I+ LCK G +D+A+EL  E
Sbjct: 752  LCKAGDLEEARRLHGDMSS------RVSRCCVPNVVTYSVLINGLCKVGRIDEARELIQE 805

Query: 219  M--KGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPR--PNLLTFNVMIDCLC 274
            M  K   + P ++   + + G C      E   L   + D   R  P+ +TF+ +ID LC
Sbjct: 806  MMRKSCDVLPNIITYNSFLDGLCKQSMMAEACELMRSLRDGSLRVSPDTVTFSTLIDGLC 865

Query: 275  KGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVV 334
            K G+ +EA  + + MI  G  P+  TYN LM+G C   +++ A  +  SM  KG    V+
Sbjct: 866  KCGQTDEACNVFDDMIAGGYVPNVVTYNVLMNGLCKTDKMERAHAMIESMVDKGVTPDVI 925

Query: 335  SYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEM 394
            +Y++L++ +CK  +V+EA+ L   + S G    V+T+N+++ GL ++ Q+G A ++FD+M
Sbjct: 926  TYSVLVDAFCKASHVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDQSGEAFQMFDDM 985

Query: 395  KL-YNVEPDLSTYNILIDGLCKNNCVQEA-VKLFHMLEMNKFEFGIEIFNCLIDGLCKAG 452
             L + + PD  TY  LIDGL +     +A V L  M + + +      FNC I+GL K G
Sbjct: 986  TLKHGLAPDKITYCTLIDGLFRTGWAGQAEVLLDAMPDPDTYA-----FNCCINGLSKLG 1040

Query: 453  RLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFN 512
             +  A    H++ +  LVP  VT++I+I G C+ G  E+A+     M      P+V+TF 
Sbjct: 1041 DVSRA---LHRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFG 1097

Query: 513  TLMHGFLQNNKTSKVVELL 531
             L+ G  +  +     +++
Sbjct: 1098 ALIDGLCKAGQVEATWDIM 1116



 Score =  253 bits (647), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 167/565 (29%), Positives = 268/565 (47%), Gaps = 64/565 (11%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
           N  ++  CK+    +  A      M     +P + ++++L  A  K    D  +     +
Sbjct: 399 NALVNGLCKAD--KMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGM 456

Query: 102 VSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNM-IAFGVRPDVITYGTLIN 160
            S G  P+ +T N +I+       GLC  +R  EA  +F +M +  G+ PD ITY TLI+
Sbjct: 457 ASRGCTPNVVTFNSIID-------GLCKSDRSGEAFQMFDDMALKHGLVPDKITYCTLID 509

Query: 161 GFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMK 220
           G  RTG    A  L   M   D           ++++  I+ L K G V +A +++  M 
Sbjct: 510 GLFRTGRAGQAEALLDAMPDPD----------TYAFNCCINGLSKLGDVSRALQVYNRML 559

Query: 221 GRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKIN 280
              + P  V    LI G C AGN+E+ + LF EM+    +P+++TF  +ID LCK G++ 
Sbjct: 560 ELELVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVE 619

Query: 281 EANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILI 340
            A  +L+LM   G+ P+  TYN+L+ G C  GRI+ A +    M S GC    ++Y  L+
Sbjct: 620 AARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLV 679

Query: 341 NGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVE 400
              C+    ++A+ L  ++ S G     +TYN L+ GL+++GQ   A  + +EM      
Sbjct: 680 YALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGQTEQAITVLEEMVGKGHH 739

Query: 401 PDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEF---GIEIFNCLIDGLCKAGRLDNA 457
           PD+ TYN LID LCK   ++EA +L   +           +  ++ LI+GLCK GR+D A
Sbjct: 740 PDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRVSRCCVPNVVTYSVLINGLCKVGRIDEA 799

Query: 458 WELFHKLPQKG---------------------------------------LVPTVVTYSI 478
            EL  ++ +K                                        + P  VT+S 
Sbjct: 800 RELIQEMMRKSCDVLPNIITYNSFLDGLCKQSMMAEACELMRSLRDGSLRVSPDTVTFST 859

Query: 479 MIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPE 538
           +I GLC+ G+ ++A +    M   G  PNVVT+N LM+G  + +K  +   ++  M   +
Sbjct: 860 LIDGLCKCGQTDEACNVFDDMIAGGYVPNVVTYNVLMNGLCKTDKMERAHAMIESMV--D 917

Query: 539 RNLVPDDTTFSIVVDLLAKDEKYHE 563
           + + PD  T+S++VD   K     E
Sbjct: 918 KGVTPDVITYSVLVDAFCKASHVDE 942



 Score =  250 bits (638), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 167/553 (30%), Positives = 270/553 (48%), Gaps = 53/553 (9%)

Query: 41   LNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRK 100
             N  +   CK+G  N  +A   F  M      P + +F  L   + K    +A       
Sbjct: 570  FNILIAGACKAG--NFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDL 627

Query: 101  LVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLIN 160
            + ++G+ P+ +T N L++       GLC   RI+EA    + M++ G  PD ITYG+L+ 
Sbjct: 628  MGNLGVPPNVVTYNALVH-------GLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVY 680

Query: 161  GFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMK 220
              CR      AL+L  ++ S  ++       +  +Y+I++D L K G  ++A  +  EM 
Sbjct: 681  ALCRASRTDDALQLVSELKSFGWD------PDTVTYNILVDGLWKSGQTEQAITVLEEMV 734

Query: 221  GRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPR---PNLLTFNVMIDCLCKGG 277
            G+G +P VV   TLI   C AG+ EE   L  +M     R   PN++T++V+I+ LCK G
Sbjct: 735  GKGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRVSRCCVPNVVTYSVLINGLCKVG 794

Query: 278  KINEANGLLELMIQRGLN--PDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHT--V 333
            +I+EA  L++ M+++  +  P+  TYNS +DG C    +  A E+  S+     + +   
Sbjct: 795  RIDEARELIQEMMRKSCDVLPNIITYNSFLDGLCKQSMMAEACELMRSLRDGSLRVSPDT 854

Query: 334  VSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDE 393
            V+++ LI+G CK    +EA +++  +I+ G    V+TYN L++GL +  +   A  + + 
Sbjct: 855  VTFSTLIDGLCKCGQTDEACNVFDDMIAGGYVPNVVTYNVLMNGLCKTDKMERAHAMIES 914

Query: 394  MKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGR 453
            M    V PD+ TY++L+D  CK + V EA++L H +        +  FN +IDGLCK+ +
Sbjct: 915  MVDKGVTPDVITYSVLVDAFCKASHVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDQ 974

Query: 454  LDNAWELFHKLPQK-GLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEK------NGC-- 504
               A+++F  +  K GL P  +TY  +I GL R G   +A   L  M        N C  
Sbjct: 975  SGEAFQMFDDMTLKHGLAPDKITYCTLIDGLFRTGWAGQAEVLLDAMPDPDTYAFNCCIN 1034

Query: 505  --------------------APNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPD 544
                                 P+ VTFN L+ G  +     +   L  +M    +NL PD
Sbjct: 1035 GLSKLGDVSRALHRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMVA--KNLQPD 1092

Query: 545  DTTFSIVVDLLAK 557
              TF  ++D L K
Sbjct: 1093 VMTFGALIDGLCK 1105



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 145/474 (30%), Positives = 232/474 (48%), Gaps = 54/474 (11%)

Query: 135 EATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIF 194
           +A  LF++ +    RP+  TY TL+    + G          +   G +     S  ++ 
Sbjct: 129 KAIDLFRSRLPPRCRPNHFTYSTLLRATYKAGG-------DVERTLGFFRRIRSSSRSVA 181

Query: 195 SYSIIIDSLCKEGLVDKAKELFL-EMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIE 253
            Y+I++ SLC+ G   +A E+F  EM   G+ P +V   T+I+G C +        LF E
Sbjct: 182 DYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELFEE 241

Query: 254 MLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGR 313
           +++ G  P+++T+N +ID LCK G + EA  L   M  R   P+  TY+ L++G C VGR
Sbjct: 242 LVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRSCVPNVVTYSVLINGLCKVGR 301

Query: 314 IDTAREIFLSMHSKGC---------------------------------------KHTVV 334
           ID ARE+   M  K C                                           V
Sbjct: 302 IDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTV 361

Query: 335 SYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEM 394
           +++ LI+G CK   ++EA S++  +I+ G    VITYN L++GL +A +   A  + + M
Sbjct: 362 TFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESM 421

Query: 395 KLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRL 454
               V PD+ TY++L+D  CK + V EA++L H +        +  FN +IDGLCK+ R 
Sbjct: 422 VDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRS 481

Query: 455 DNAWELFHKLPQK-GLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNT 513
             A+++F  +  K GLVP  +TY  +I GL R G+  +A   L  M      P+   FN 
Sbjct: 482 GEAFQMFDDMALKHGLVPDKITYCTLIDGLFRTGRAGQAEALLDAMPD----PDTYAFNC 537

Query: 514 LMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAV 567
            ++G  +    S+ +++ ++M E E  LVPD  TF+I++    K   + + SA+
Sbjct: 538 CINGLSKLGDVSRALQVYNRMLELE--LVPDKVTFNILIAGACKAGNFEQASAL 589



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 122/417 (29%), Positives = 208/417 (49%), Gaps = 40/417 (9%)

Query: 190 KTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHG-FCCAGNWEEVN 248
           K  IFS++  ++ L K G   KA +LF         P     +TL+   +   G+ E   
Sbjct: 108 KHTIFSFNKYLNLLVKSGSPAKAIDLFRSRLPPRCRPNHFTYSTLLRATYKAGGDVERTL 167

Query: 249 GLFI----------------------------------EMLDLGPRPNLLTFNVMIDCLC 274
           G F                                   EM   G  P ++T+N +I+ LC
Sbjct: 168 GFFRRIRSSSRSVADYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLC 227

Query: 275 KGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVV 334
           K  ++     L E +++RG +PD  TYN+L+D  C  G ++ AR +   M S+ C   VV
Sbjct: 228 KSNELGAGMELFEELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRSCVPNVV 287

Query: 335 SYNILINGYCKILNVEEAMSLYRQII--SNGVRQTVITYNTLLSGLFQAGQAGYAQKLFD 392
           +Y++LING CK+  ++EA  L +++   S  V   +ITYN+ L GL +      A +L  
Sbjct: 288 TYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMR 347

Query: 393 EMK--LYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCK 450
            ++     V PD  T++ LIDGLCK   + EA  +F  +    +   +  +N L++GLCK
Sbjct: 348 SLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCK 407

Query: 451 AGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVT 510
           A +++ A  +   +  KG+ P V+TYS+++   C+  ++++A + L  M   GC PNVVT
Sbjct: 408 ADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVT 467

Query: 511 FNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAV 567
           FN+++ G  +++++ +  ++   MA  +  LVPD  T+  ++D L +  +  +  A+
Sbjct: 468 FNSIIDGLCKSDRSGEAFQMFDDMAL-KHGLVPDKITYCTLIDGLFRTGRAGQAEAL 523



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 105/380 (27%), Positives = 172/380 (45%), Gaps = 76/380 (20%)

Query: 258 GPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSL------------- 304
           G +  + +FN  ++ L K G   +A  L    +     P+ FTY++L             
Sbjct: 106 GFKHTIFSFNKYLNLLVKSGSPAKAIDLFRSRLPPRCRPNHFTYSTLLRATYKAGGDVER 165

Query: 305 ---------------------MDGYCLVGRIDTAREIFL-SMHSKGCKHTVVSYNILING 342
                                +   C  G    A EIF   M   G   T+V+YN +ING
Sbjct: 166 TLGFFRRIRSSSRSVADYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIING 225

Query: 343 YCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPD 402
            CK   +   M L+ +++  G    V+TYNTL+  L +AG    A++L  +M   +  P+
Sbjct: 226 LCKSNELGAGMELFEELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRSCVPN 285

Query: 403 LSTYNILIDGLCKNNCVQEAVKLFH------------MLEMNKFEFGI------------ 438
           + TY++LI+GLCK   + EA +L              ++  N F  G+            
Sbjct: 286 VVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACEL 345

Query: 439 ---------------EIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGL 483
                            F+ LIDGLCK G++D A  +F  +   G VP V+TY+ +++GL
Sbjct: 346 MRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGL 405

Query: 484 CRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVP 543
           C+  K+E+A+  +  M   G  P+V+T++ L+  F + ++  + +ELLH MA   R   P
Sbjct: 406 CKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMA--SRGCTP 463

Query: 544 DDTTFSIVVDLLAKDEKYHE 563
           +  TF+ ++D L K ++  E
Sbjct: 464 NVVTFNSIIDGLCKSDRSGE 483



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 73/253 (28%), Positives = 128/253 (50%), Gaps = 2/253 (0%)

Query: 328 GCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYA 387
           G KHT+ S+N  +N   K  +  +A+ L+R  +    R    TY+TLL   ++AG     
Sbjct: 106 GFKHTIFSFNKYLNLLVKSGSPAKAIDLFRSRLPPRCRPNHFTYSTLLRATYKAG-GDVE 164

Query: 388 QKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFH-MLEMNKFEFGIEIFNCLID 446
           + L    ++ +    ++ YNI++  LC+      A+++F   +  +     I  +N +I+
Sbjct: 165 RTLGFFRRIRSSSRSVADYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIIN 224

Query: 447 GLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAP 506
           GLCK+  L    ELF +L ++G  P VVTY+ +I  LC+ G LE+A      M    C P
Sbjct: 225 GLCKSNELGAGMELFEELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRSCVP 284

Query: 507 NVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSA 566
           NVVT++ L++G  +  +  +  EL+ +M     +++P+  T++  +D L K     E   
Sbjct: 285 NVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACE 344

Query: 567 VSKSSYRACLYVT 579
           + +S     L V+
Sbjct: 345 LMRSLRDGSLRVS 357


>gi|8493575|gb|AAF75798.1|AC011000_1 Contains multiple PPR Repeats PF|01535 [Arabidopsis thaliana]
          Length = 514

 Score =  291 bits (745), Expect = 8e-76,   Method: Compositional matrix adjust.
 Identities = 158/463 (34%), Positives = 263/463 (56%), Gaps = 26/463 (5%)

Query: 101 LVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLIN 160
           +V  G   + +T   L+N       GLC E R+ +A  L   M+  G +PD +TYGT++N
Sbjct: 1   MVETGCPANVVTFTTLMN-------GLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVN 53

Query: 161 GFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMK 220
           G C+ G+   AL + +KM           K N+  YS I+D LCK+G   KA+ +F EM 
Sbjct: 54  GMCKLGDTVSALNMLRKMDESQI------KANVVIYSAIVDRLCKDGNHIKAQNIFTEMH 107

Query: 221 GRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKIN 280
            +GI P V+    +I G+C  G W +   L  +M++    P+++TF+ +I+   K GK++
Sbjct: 108 EKGIFPNVLTYNCMIDGYCSYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVS 167

Query: 281 EANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILI 340
            A  L   M++R + P   TY+S++DG+C   R++ A+ +F  M SKGC   +++ N LI
Sbjct: 168 GAEELYREMLRRNIFPTTITYSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLI 227

Query: 341 N-----------GYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQK 389
           +           G+C++ NV  A  L++++ISNGV   ++T NTLL+GL + G+   A +
Sbjct: 228 DGCCRAKRHLIHGFCQVGNVNVAQDLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALE 287

Query: 390 LFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLC 449
           +F   +   ++ D +T NI+I+G+CK N V EA  LF+ L +N  E  +  +N LI    
Sbjct: 288 MFKVFQKSKMDLDTATCNIIINGMCKGNKVDEAWDLFNSLPVNGVETDVVTYNILIGVFV 347

Query: 450 KAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVV 509
           K G    A +++ ++  KG++P+ VTY+ M+ G C++ +LE+A   +  M   GC+P+VV
Sbjct: 348 KEGNFLRAEDIYLEMLCKGIIPSTVTYNSMVDGFCKQNRLEEARQMVDSMVSEGCSPDVV 407

Query: 510 TFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVV 552
           TF+TL+ G+ +  +    +EL  +M   +R LV D  T++ ++
Sbjct: 408 TFSTLIKGYCKAGRVDDGLELFSEMC--QRGLVADTITYNALI 448



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 117/421 (27%), Positives = 202/421 (47%), Gaps = 47/421 (11%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CK G  N  +A+  F  M      P + ++N +         +       R ++   + P
Sbjct: 91  CKDG--NHIKAQNIFTEMHEKGIFPNVLTYNCMIDGYCSYGKWSDAEQLLRDMIERNIDP 148

Query: 109 DFLTLNILINCF-------GNKE---------------------RGLCVENRIKEATWLF 140
           D +T + LIN F       G +E                      G C  +R+++A  +F
Sbjct: 149 DVVTFSALINAFVKEGKVSGAEELYREMLRRNIFPTTITYSSMIDGFCKHSRLEDAKHMF 208

Query: 141 KNMIAFGVRPDVITYGTLIN-----------GFCRTGNLSVALRLHKKMVSGDYENGLIS 189
             M++ G  PD+IT  TLI+           GFC+ GN++VA  L ++M+S    NG+  
Sbjct: 209 DLMVSKGCSPDIITLNTLIDGCCRAKRHLIHGFCQVGNVNVAQDLFQEMIS----NGV-- 262

Query: 190 KTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNG 249
             +I + + ++  LC+ G ++KA E+F   +   ++     C  +I+G C     +E   
Sbjct: 263 SPDIVTCNTLLAGLCENGKLEKALEMFKVFQKSKMDLDTATCNIIINGMCKGNKVDEAWD 322

Query: 250 LFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYC 309
           LF  +   G   +++T+N++I    K G    A  +   M+ +G+ P   TYNS++DG+C
Sbjct: 323 LFNSLPVNGVETDVVTYNILIGVFVKEGNFLRAEDIYLEMLCKGIIPSTVTYNSMVDGFC 382

Query: 310 LVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVI 369
              R++ AR++  SM S+GC   VV+++ LI GYCK   V++ + L+ ++   G+    I
Sbjct: 383 KQNRLEEARQMVDSMVSEGCSPDVVTFSTLIKGYCKAGRVDDGLELFSEMCQRGLVADTI 442

Query: 370 TYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHML 429
           TYN L+ G  + G    AQ +F+EM    V PD  T+  ++ GLC    +Q+ + +   L
Sbjct: 443 TYNALIHGFCKVGDLNGAQDIFEEMVSSGVCPDTITFRSMLAGLCTKAELQKGLTMLEDL 502

Query: 430 E 430
           +
Sbjct: 503 Q 503



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 104/359 (28%), Positives = 180/359 (50%), Gaps = 16/359 (4%)

Query: 41  LNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRK 100
           +N F+ E   SG      A   +  M      P   +++ +     K+   +     +  
Sbjct: 157 INAFVKEGKVSG------AEELYREMLRRNIFPTTITYSSMIDGFCKHSRLEDAKHMFDL 210

Query: 101 LVSIGLLPDFLTLNILINCFGNKER----GLCVENRIKEATWLFKNMIAFGVRPDVITYG 156
           +VS G  PD +TLN LI+     +R    G C    +  A  LF+ MI+ GV PD++T  
Sbjct: 211 MVSKGCSPDIITLNTLIDGCCRAKRHLIHGFCQVGNVNVAQDLFQEMISNGVSPDIVTCN 270

Query: 157 TLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELF 216
           TL+ G C  G L  AL + K       +       +  + +III+ +CK   VD+A +LF
Sbjct: 271 TLLAGLCENGKLEKALEMFKVFQKSKMD------LDTATCNIIINGMCKGNKVDEAWDLF 324

Query: 217 LEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKG 276
             +   G+   VV    LI  F   GN+     +++EML  G  P+ +T+N M+D  CK 
Sbjct: 325 NSLPVNGVETDVVTYNILIGVFVKEGNFLRAEDIYLEMLCKGIIPSTVTYNSMVDGFCKQ 384

Query: 277 GKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSY 336
            ++ EA  +++ M+  G +PD  T+++L+ GYC  GR+D   E+F  M  +G     ++Y
Sbjct: 385 NRLEEARQMVDSMVSEGCSPDVVTFSTLIKGYCKAGRVDDGLELFSEMCQRGLVADTITY 444

Query: 337 NILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMK 395
           N LI+G+CK+ ++  A  ++ +++S+GV    IT+ ++L+GL    +      + ++++
Sbjct: 445 NALIHGFCKVGDLNGAQDIFEEMVSSGVCPDTITFRSMLAGLCTKAELQKGLTMLEDLQ 503



 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 99/348 (28%), Positives = 180/348 (51%), Gaps = 14/348 (4%)

Query: 226 PA-VVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANG 284
           PA VV  TTL++G C  G   +   L   M++ G +P+ +T+  +++ +CK G    A  
Sbjct: 7   PANVVTFTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGDTVSALN 66

Query: 285 LLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYC 344
           +L  M +  +  +   Y++++D  C  G    A+ IF  MH KG    V++YN +I+GYC
Sbjct: 67  MLRKMDESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNCMIDGYC 126

Query: 345 KILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLS 404
                 +A  L R +I   +   V+T++ L++   + G+   A++L+ EM   N+ P   
Sbjct: 127 SYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRNIFPTTI 186

Query: 405 TYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKA-----------GR 453
           TY+ +IDG CK++ +++A  +F ++        I   N LIDG C+A           G 
Sbjct: 187 TYSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIHGFCQVGN 246

Query: 454 LDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNT 513
           ++ A +LF ++   G+ P +VT + ++ GLC  GKLEKA +     +K+    +  T N 
Sbjct: 247 VNVAQDLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQKSKMDLDTATCNI 306

Query: 514 LMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKY 561
           +++G  + NK  +  +L + +  P   +  D  T++I++ +  K+  +
Sbjct: 307 IINGMCKGNKVDEAWDLFNSL--PVNGVETDVVTYNILIGVFVKEGNF 352



 Score = 86.3 bits (212), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 50/182 (27%), Positives = 89/182 (48%), Gaps = 2/182 (1%)

Query: 405 TYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKL 464
           T+  L++GLC+   V +A+ L   +     +     +  +++G+CK G   +A  +  K+
Sbjct: 12  TFTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGDTVSALNMLRKM 71

Query: 465 PQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKT 524
            +  +   VV YS ++  LC+ G   KA +    M + G  PNV+T+N ++ G+    K 
Sbjct: 72  DESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNCMIDGYCSYGKW 131

Query: 525 SKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKSSYRACLYVTIFQPS 584
           S   +LL  M E  RN+ PD  TFS +++   K+ K      + +   R  ++ T    S
Sbjct: 132 SDAEQLLRDMIE--RNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRNIFPTTITYS 189

Query: 585 SL 586
           S+
Sbjct: 190 SM 191


>gi|302818914|ref|XP_002991129.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
 gi|300141060|gb|EFJ07775.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
          Length = 614

 Score =  291 bits (744), Expect = 9e-76,   Method: Compositional matrix adjust.
 Identities = 172/531 (32%), Positives = 279/531 (52%), Gaps = 58/531 (10%)

Query: 78  FNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEAT 137
           +  L   + K +  D  ++   ++   G  P+ +T N LI+       GLC  N    A 
Sbjct: 82  YTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLID-------GLCKNNEPDRAQ 134

Query: 138 WLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMV---SGDYENGLISKTNIF 194
            LF++M +    P ++TY TL++G  RTG L  A+ L ++M+   S D ++      N+ 
Sbjct: 135 ELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDDR--CSPNVI 192

Query: 195 SYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFC----CAGNWEEVNGL 250
           +YS++ID LCK   V +A EL   MK RG +P V+  T L+ G C     A  WE    +
Sbjct: 193 TYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWE----V 248

Query: 251 FIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCL 310
             EMLD G  PNL+T+N ++  LC+  ++++A  L+  M  RG  P+  TY +L+DG C 
Sbjct: 249 LREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCK 308

Query: 311 VGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVIT 370
           VGR+  A  +   M  KG    ++ YN+LING CK   V+E+++L R+ +S G++  V+T
Sbjct: 309 VGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVT 368

Query: 371 YNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLE 430
           Y++++ GL ++ +   A +L   +K     PD+  Y+ LIDGLCK   V EA  L+ ++ 
Sbjct: 369 YSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMA 428

Query: 431 MNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLE 490
            +  +  +  ++ LIDGLCKAGR+D A  L  ++ + G  P+ +TY+ +I GLC    L+
Sbjct: 429 GDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLD 488

Query: 491 KANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLH------------------ 532
           +A + +  ME++ CAP+ VT+N L+HG  +  +    V LL                   
Sbjct: 489 EAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAVVLLEQAKARCVAAGGTALDTIA 548

Query: 533 ------------KMAEP--------ERNLVPDDTTFSIVVDLLAKDEKYHE 563
                       ++AE         +  ++PD  T+SI+++ L K +  HE
Sbjct: 549 YSSLIDGLCKAGRVAEALDYFQEMIDNGVIPDHITYSILLEGLKKSKDLHE 599



 Score =  264 bits (674), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 159/537 (29%), Positives = 271/537 (50%), Gaps = 45/537 (8%)

Query: 21  LSSLFKSPRQIAAVSSPETQLNEFLHENCKSGIINLN-------------EARYFFGYMT 67
           LS L+K  R   A++     L+E     C+  ++  N              A+  F +M 
Sbjct: 86  LSGLWKEKRLDQALAI----LHEMRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMK 141

Query: 68  HMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIG-------LLPDFLTLNILINCF 120
            ++ SP + ++N L   + +    +  ++ +++++            P+ +T ++LI+  
Sbjct: 142 SVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDDRCSPNVITYSVLID-- 199

Query: 121 GNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVS 180
                GLC  NR+ +A  L ++M A G  PDVITY  L++G C+   ++ A  + ++M+ 
Sbjct: 200 -----GLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREML- 253

Query: 181 GDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCC 240
              + G +   N+ +Y+ ++  LC+   V  A  L  +M  RG  P VV   TLI G C 
Sbjct: 254 ---DAGCVP--NLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCK 308

Query: 241 AGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFT 300
            G  ++   +  +M+D G  P+L+ +N++I+ LCK  +++E+  LL   +  G+ PD  T
Sbjct: 309 VGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVT 368

Query: 301 YNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQII 360
           Y+S++ G C   R+D A  + L + S+GC   V+ Y+ LI+G CK   V+EA  LY  + 
Sbjct: 369 YSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMA 428

Query: 361 SNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQ 420
            +G    V+TY+TL+ GL +AG+   A  L   M      P   TYN LI GLC  N + 
Sbjct: 429 GDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLD 488

Query: 421 EAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQK-----GLVPTVVT 475
           EA++L   +E +        +N LI G+C+  R+D+A  L  +   +     G     + 
Sbjct: 489 EAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAVVLLEQAKARCVAAGGTALDTIA 548

Query: 476 YSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLH 532
           YS +I GLC+ G++ +A D+   M  NG  P+ +T++ L+ G     K+  + EL H
Sbjct: 549 YSSLIDGLCKAGRVAEALDYFQEMIDNGVIPDHITYSILLEGL---KKSKDLHELRH 602



 Score =  257 bits (656), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 160/531 (30%), Positives = 266/531 (50%), Gaps = 57/531 (10%)

Query: 72  SPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVEN 131
            P + ++  L     +    D     + ++ S  L+P+    +ILI+       GLC   
Sbjct: 6   QPDVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILID-------GLCKAK 58

Query: 132 RIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKT 191
           R  +A   F+ M   G+  D + Y  L++G  +   L  AL +  +M     ++G   + 
Sbjct: 59  RSIDALRCFRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEM----RDHG--CEP 112

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
           N+ +Y+ +ID LCK    D+A+ELF  MK    +P++V   TL+ G    G  E    LF
Sbjct: 113 NVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALF 172

Query: 252 IEMLD-----LGPR--PNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSL 304
            EMLD     +  R  PN++T++V+ID LCK  ++++A  LLE M  RG +PD  TY  L
Sbjct: 173 QEMLDRRSHDMDDRCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTIL 232

Query: 305 MDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGV 364
           +DG C   ++  A E+   M   GC   +V+YN L++G C+   V +A++L R +   G 
Sbjct: 233 VDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGC 292

Query: 365 RQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVK 424
              V+TY TL+ GL + G+   A  +  +M      PDL  YN+LI+GLCK + V E++ 
Sbjct: 293 TPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIA 352

Query: 425 L--------------------FHMLEMNKFEFG---------------IEIFNCLIDGLC 449
           L                    + +   N+ +                 + +++ LIDGLC
Sbjct: 353 LLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLC 412

Query: 450 KAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVV 509
           KAG++D A++L+  +   G    VVTYS +I GLC+ G++++A+  L  M + G  P+ +
Sbjct: 413 KAGKVDEAFDLYEVMAGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTM 472

Query: 510 TFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEK 560
           T+N+L+ G    N   + +EL+ +M     N  P   T++I++  + + E+
Sbjct: 473 TYNSLIKGLCDLNHLDEAIELVEEMERS--NCAPSAVTYNILIHGMCRMER 521



 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 145/457 (31%), Positives = 225/457 (49%), Gaps = 50/457 (10%)

Query: 149 RPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLC---- 204
           +PDV TY  L+ GFCR G +  A R   +M S +         N+F  SI+ID LC    
Sbjct: 6   QPDVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNL------VPNVFLCSILIDGLCKAKR 59

Query: 205 -------------------------------KEGLVDKAKELFLEMKGRGINPAVVVCTT 233
                                          KE  +D+A  +  EM+  G  P VV   +
Sbjct: 60  SIDALRCFRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNS 119

Query: 234 LIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQR- 292
           LI G C     +    LF  M  +   P+++T+N ++D L + GK+  A  L + M+ R 
Sbjct: 120 LIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRR 179

Query: 293 ------GLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKI 346
                   +P+  TY+ L+DG C   R+  A E+  SM ++GC   V++Y IL++G CK 
Sbjct: 180 SHDMDDRCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKE 239

Query: 347 LNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTY 406
             V  A  + R+++  G    ++TYN+LL GL +A +   A  L  +M      P++ TY
Sbjct: 240 SKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTY 299

Query: 407 NILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQ 466
             LIDGLCK   V++A  +   +        + I+N LI+GLCKA ++D +  L  +   
Sbjct: 300 GTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVS 359

Query: 467 KGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSK 526
            G+ P VVTYS +I+GLCR  +L++A   LLY++  GC P+V+ ++TL+ G  +  K  +
Sbjct: 360 GGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDE 419

Query: 527 VVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
             +L   MA    +   D  T+S ++D L K  +  E
Sbjct: 420 AFDLYEVMAGDGCD--ADVVTYSTLIDGLCKAGRVDE 454



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 119/408 (29%), Positives = 209/408 (51%), Gaps = 15/408 (3%)

Query: 188 ISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEV 247
           I + ++++Y+ ++   C+ G +D+A+  F EM+ + + P V +C+ LI G C A    + 
Sbjct: 4   ICQPDVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDA 63

Query: 248 NGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDG 307
              F  M   G   + + +  ++  L K  ++++A  +L  M   G  P+  TYNSL+DG
Sbjct: 64  LRCFRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDG 123

Query: 308 YCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQII------- 360
            C     D A+E+F  M S  C  ++V+YN L++G  +   +E AM+L+++++       
Sbjct: 124 LCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDM 183

Query: 361 SNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQ 420
            +     VITY+ L+ GL +A +   A +L + MK     PD+ TY IL+DGLCK + V 
Sbjct: 184 DDRCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVA 243

Query: 421 EAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMI 480
            A ++   +        +  +N L+ GLC+A R+ +A  L   +  +G  P VVTY  +I
Sbjct: 244 AAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLI 303

Query: 481 HGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERN 540
            GLC+ G+++ A   L  M   G  P+++ +N L++G  + ++  + + LL +       
Sbjct: 304 DGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSG--G 361

Query: 541 LVPDDTTFSIVVDLLAKDEKYHE-CSAVSKSSYRAC-----LYVTIFQ 582
           + PD  T+S V+  L +  +  E C  +     R C     LY T+  
Sbjct: 362 IKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLID 409



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 59/213 (27%), Positives = 97/213 (45%), Gaps = 11/213 (5%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CK+G   ++EA   +  M        + +++ L   + K    D       ++V +G  P
Sbjct: 412 CKAG--KVDEAFDLYEVMAGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPP 469

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
             +T N LI       +GLC  N + EA  L + M      P  +TY  LI+G CR   +
Sbjct: 470 STMTYNSLI-------KGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERV 522

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
             A+ L ++  +     G  +   I +YS +ID LCK G V +A + F EM   G+ P  
Sbjct: 523 DSAVVLLEQAKARCVAAGGTALDTI-AYSSLIDGLCKAGRVAEALDYFQEMIDNGVIPDH 581

Query: 229 VVCTTLIHGFCCAGNWEEVNGLFI-EMLDLGPR 260
           +  + L+ G   + +  E+  L + +M+ LG R
Sbjct: 582 ITYSILLEGLKKSKDLHELRHLVLDQMVQLGYR 614


>gi|41152686|dbj|BAD08211.1| hypothetical protein [Oryza sativa Indica Group]
 gi|67906118|dbj|BAE00069.1| PPR protein [Oryza sativa Indica Group]
          Length = 794

 Score =  291 bits (744), Expect = 9e-76,   Method: Compositional matrix adjust.
 Identities = 182/528 (34%), Positives = 279/528 (52%), Gaps = 52/528 (9%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
           P   ++N +      +      I F +K+ S G+ PD +T N L++        LC   R
Sbjct: 267 PNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDY-------LCKNGR 319

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
             EA  +F +M   G++P++ TYGTL+ G+   G L     L   MV     NG+    N
Sbjct: 320 CTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMV----RNGI--HPN 373

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVV----------------------- 229
            + +SI+I +  K+G VD+A  +F +M+ +G+NP  V                       
Sbjct: 374 HYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFE 433

Query: 230 ------------VCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGG 277
                       V  +LIH  C    W++   L +EMLD G   + + FN +ID  CK G
Sbjct: 434 QMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEG 493

Query: 278 KINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYN 337
           ++ E+  L +LM++ G+ P+  TY++L+DGYCL G++D A ++  SM S G K   V+YN
Sbjct: 494 RVIESEKLFDLMVRIGVKPNIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYN 553

Query: 338 ILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLY 397
            LINGYCKI  +E+A+ L+R++ S+GV   +ITYN +L GLFQ  +   A++L+  +   
Sbjct: 554 TLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITES 613

Query: 398 NVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNA 457
             + +LSTYNI++ GLCKNN   EA+++F  L +   +     FN +I  L K GR D A
Sbjct: 614 GTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEA 673

Query: 458 WELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHG 517
            +LF  L   GLVP V TYS+M   L  +G LE+ +D  L ME+NGC  N    N+++  
Sbjct: 674 KDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRK 733

Query: 518 FLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLA--KDEKYHE 563
            LQ    ++    L  + E   +L  + +T S+ +DLL+  K ++YH 
Sbjct: 734 LLQRGDITRAGTYLFMIDEKHFSL--EASTASLFLDLLSGGKYQEYHR 779



 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 165/562 (29%), Positives = 275/562 (48%), Gaps = 55/562 (9%)

Query: 80  LLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWL 139
           LL G  A  R  DA+    R++  +G +P+  + NIL+       +GLC ENR +EA  L
Sbjct: 132 LLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILL-------KGLCDENRSQEALEL 184

Query: 140 FKNMIAFG--VRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYS 197
            + M   G    PDV++Y T+INGF + G+L  A   + +M+    + G++   N+ +Y+
Sbjct: 185 LQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEML----DRGILP--NVVTYN 238

Query: 198 IIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDL 257
            II +LCK   +DKA E+   M   G+ P      +++HG+C +G  +E  G   +M   
Sbjct: 239 SIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSD 298

Query: 258 GPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYC----LV-- 311
           G  P+++T+N ++D LCK G+  EA  + + M +RGL P+  TY +L+ GY     LV  
Sbjct: 299 GVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEM 358

Query: 312 -----------------------------GRIDTAREIFLSMHSKGCKHTVVSYNILING 342
                                        G++D A  +F  M  +G     V+Y  +I  
Sbjct: 359 HGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGI 418

Query: 343 YCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPD 402
            CK   VE+AM  + Q+I   +    I YN+L+  L    +   A++L  EM    +  D
Sbjct: 419 LCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLD 478

Query: 403 LSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFH 462
              +N +ID  CK   V E+ KLF ++     +  I  ++ LIDG C AG++D A +L  
Sbjct: 479 TIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPNIITYSTLIDGYCLAGKMDEATKLLA 538

Query: 463 KLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNN 522
            +   G+ P  VTY+ +I+G C+  ++E A      ME +G +P+++T+N ++ G  Q  
Sbjct: 539 SMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTR 598

Query: 523 KTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKSSYRACLYVTIFQ 582
           +T+   EL   + E    L  + +T++I++  L K+    E   + ++    CL     +
Sbjct: 599 RTAAAKELYVGITESGTQL--ELSTYNIILHGLCKNNLTDEALRMFQN---LCLTDLQLE 653

Query: 583 PSSLGSMIGCTVRLMPQPEMSD 604
             +   MIG  +++    E  D
Sbjct: 654 TRTFNIMIGALLKVGRNDEAKD 675



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 157/582 (26%), Positives = 261/582 (44%), Gaps = 78/582 (13%)

Query: 58  EARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIG---LLPDFLTLN 114
           +AR+ F  +        I   N     VA++    A +S Y ++   G   + P+  T  
Sbjct: 37  DARHVFDELLRRGRGASIYGLNCALADVARHSPA-AAVSRYNRMARAGADEVTPNLCTYG 95

Query: 115 ILIN---CFGNKE-------------------------RGLCVENRIKEA-TWLFKNMIA 145
           ILI    C G  +                         +GLC + R  +A   + + M  
Sbjct: 96  ILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQ 155

Query: 146 FGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCK 205
            G  P+V +Y  L+ G C       AL L + M     ++G     ++ SY+ +I+   K
Sbjct: 156 LGCIPNVFSYNILLKGLCDENRSQEALELLQMMP----DDGGDCPPDVVSYTTVINGFFK 211

Query: 206 EGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLT 265
           EG +DKA   + EM  RGI P VV   ++I   C A   ++   +   M+  G  PN  T
Sbjct: 212 EGDLDKAYGTYHEMLDRGILPNVVTYNSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRT 271

Query: 266 FNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMH 325
           +N ++   C  G+  EA G L+ M   G+ PD  TYNSLMD  C  GR   AR++F SM 
Sbjct: 272 YNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMT 331

Query: 326 SKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAG 385
            +G K  + +Y  L+ GY     + E   L   ++ NG+      ++ L+    + G+  
Sbjct: 332 KRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVD 391

Query: 386 YAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLF-HMLE-------------- 430
            A  +F +M+   + PD  TY  +I  LCK+  V++A++ F  M++              
Sbjct: 392 QAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLI 451

Query: 431 -----MNKFEFGIEI---------------FNCLIDGLCKAGRLDNAWELFHKLPQKGLV 470
                 +K++   E+               FN +ID  CK GR+  + +LF  + + G+ 
Sbjct: 452 HSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVK 511

Query: 471 PTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVEL 530
           P ++TYS +I G C  GK+++A   L  M   G  P+ VT+NTL++G+ + ++    + L
Sbjct: 512 PNIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVL 571

Query: 531 LHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKSSY 572
             +M      + PD  T++I++  L +  +    +A +K  Y
Sbjct: 572 FREMESS--GVSPDIITYNIILQGLFQTRR----TAAAKELY 607


>gi|242069905|ref|XP_002450229.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
 gi|241936072|gb|EES09217.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
          Length = 797

 Score =  291 bits (744), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 179/558 (32%), Positives = 284/558 (50%), Gaps = 49/558 (8%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CK+ +++  E    F  M      P   ++N L         +  V+    ++ + GL P
Sbjct: 249 CKAQVVDRAEG--VFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKP 306

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           D  T   L+N        LC   R +EA +LF +MI  G++P+V  YG LI+G+   G L
Sbjct: 307 DCYTYGSLLNY-------LCNNGRCREARFLFDSMIRKGIKPNVAIYGILIHGYATKGAL 359

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFS--------------------------------- 195
           S    L   MV    ENGL    +IF+                                 
Sbjct: 360 SEMHDLLNLMV----ENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVN 415

Query: 196 YSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEML 255
           Y  +ID+LCK G VD A   F +M   G+ P + V  +L++G C    WE+    + EML
Sbjct: 416 YGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEML 475

Query: 256 DLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRID 315
           + G RP+++ FN ++  LC  G++ +A  L++LM + G  P   +Y +L+ G+CLVGRID
Sbjct: 476 NQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPGVISYTTLIGGHCLVGRID 535

Query: 316 TAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLL 375
            A +    M S G K    +YN L++GYC+   +++A  ++R+++ NG+   V+TY+T+L
Sbjct: 536 EAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTIL 595

Query: 376 SGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFE 435
            GLF   +   A++L+  M     + ++  YNI+++GL KNNCV EA KLF  L    F+
Sbjct: 596 HGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQ 655

Query: 436 FGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDF 495
             I  FN +I  L K+GR ++A  LF  +   GLVP V TY ++   L  +G LE+ +D 
Sbjct: 656 LEITTFNIMIGALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDL 715

Query: 496 LLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLL 555
              MEK+G  PN    N L+   L     ++    L K+   E+N   + +T ++++ LL
Sbjct: 716 FSAMEKSGTTPNSRMLNALVRRLLHRGDITRAGAYLCKL--DEKNFSLEASTTAMLISLL 773

Query: 556 AKDEKYHECSAVSKSSYR 573
           ++DE +H  +++ +  YR
Sbjct: 774 SRDEYHHHATSLPE-KYR 790



 Score =  258 bits (660), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 180/563 (31%), Positives = 275/563 (48%), Gaps = 46/563 (8%)

Query: 30  QIAAVSSPETQLNEFLHENCKSGIINLNEA-RYFFGYMTHMQPSPPISSFNLLFGAVAK- 87
           +++AVS+   +L   +    +SG + L++A + F G +TH +P+  I +FN L  AV++ 
Sbjct: 4   RVSAVSNRCLELERVIGSRARSGSLGLDDALKLFDGLLTHARPASVI-AFNHLLTAVSRV 62

Query: 88  ------NRHYDAVISFYRKLV---SIGLLPDFLTLNILINCF---GNKE----------- 124
                     + V+S + +++   +I + PD  T +ILI CF   G  E           
Sbjct: 63  SGRRSSTTESELVVSLFNRMIRECTIKVTPDPCTYSILIGCFCRMGRLEHGFATFGLILK 122

Query: 125 --------------RGLCVENRIKEA-TWLFKNMIAFGVRPDVITYGTLINGFCRTGNLS 169
                         +GLC   R+ EA   L K M   G  PDV++Y TL+ GFC      
Sbjct: 123 SGWRVNNIVINQLLKGLCDAKRLCEAMDILVKRMPELGCTPDVVSYNTLLKGFCNEKRAE 182

Query: 170 VALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVV 229
            AL L   M       G     N+ SY+I+I+    EG VDKA  LFLEM  RGI P VV
Sbjct: 183 EALELLHMMAD---SQGRSCPPNVVSYAIVINGFFTEGQVDKAYNLFLEMMDRGIQPNVV 239

Query: 230 VCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELM 289
             TT+I G C A   +   G+F +M+D G +P+  T+N +I      GK  E   +LE M
Sbjct: 240 TYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEM 299

Query: 290 IQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNV 349
              GL PD +TY SL++  C  GR   AR +F SM  KG K  V  Y ILI+GY     +
Sbjct: 300 SAHGLKPDCYTYGSLLNYLCNNGRCREARFLFDSMIRKGIKPNVAIYGILIHGYATKGAL 359

Query: 350 EEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNIL 409
            E   L   ++ NG+      +N + +   +      A  +F++MK   + PD+  Y  L
Sbjct: 360 SEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNYGAL 419

Query: 410 IDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGL 469
           ID LCK   V +AV  F+ +        I +FN L+ GLC   + + A E + ++  +G+
Sbjct: 420 IDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGI 479

Query: 470 VPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVE 529
            P VV ++ ++  LC KG++ KA   +  ME+ G  P V+++ TL+ G     +  +  +
Sbjct: 480 RPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPGVISYTTLIGGHCLVGRIDEAAK 539

Query: 530 LLHKMAEPERNLVPDDTTFSIVV 552
            L  M      L PD+ T++ ++
Sbjct: 540 SLDVMLSV--GLKPDEWTYNTLL 560



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 60/227 (26%), Positives = 114/227 (50%), Gaps = 16/227 (7%)

Query: 347 LNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAG-------QAGYAQKLFDEMK---L 396
           L +++A+ L+  ++++    +VI +N LL+ + +         ++     LF+ M     
Sbjct: 28  LGLDDALKLFDGLLTHARPASVIAFNHLLTAVSRVSGRRSSTTESELVVSLFNRMIRECT 87

Query: 397 YNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDN 456
             V PD  TY+ILI   C+   ++     F ++  + +     + N L+ GLC A RL  
Sbjct: 88  IKVTPDPCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLCE 147

Query: 457 AWE-LFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYM---EKNGCAPNVVTFN 512
           A + L  ++P+ G  P VV+Y+ ++ G C + + E+A + L  M   +   C PNVV++ 
Sbjct: 148 AMDILVKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYA 207

Query: 513 TLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDE 559
            +++GF    +  K   L  +M   +R + P+  T++ V+D L K +
Sbjct: 208 IVINGFFTEGQVDKAYNLFLEMM--DRGIQPNVVTYTTVIDGLCKAQ 252


>gi|242071495|ref|XP_002451024.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
 gi|241936867|gb|EES10012.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
          Length = 813

 Score =  291 bits (744), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 176/564 (31%), Positives = 288/564 (51%), Gaps = 68/564 (12%)

Query: 55  NLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLN 114
           ++N+A   F  M     SP +S++N +  A+ K R  D   +  R++V  G+LPD  T N
Sbjct: 231 DVNKACDLFNEMVQRGISPDLSTYNCVVNALCKARAMDKAEAILRQMVDKGVLPDNWTYN 290

Query: 115 ILINCFGNKER----------------------------GLCVENRIKEATWLFKNMIAF 146
            LI  + +  +                             LC   +IK+A  +F +M   
Sbjct: 291 SLIYGYSSTGQWKEAVRVSKKMTSQGILPDVVTLNSLMASLCKHGKIKDARDVFDSMAMK 350

Query: 147 GVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIF------------ 194
           G + D+ +Y  ++NG+   G L     L   M+S    +G+   ++IF            
Sbjct: 351 GQKTDIFSYKIMLNGYATKGCLVDLTELFNLMLS----DGIAPDSHIFNVLIKAYAKCGM 406

Query: 195 ---------------------SYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTT 233
                                +YS +I +LC+ G +D A E F +M  +G+ P++     
Sbjct: 407 LDRATIIFNEMREQGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQMIDQGVAPSISTYHF 466

Query: 234 LIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRG 293
           LI GFC  G+  +   L ++M++ G RP++  FN +I+ LCK G++ +A  + +  I  G
Sbjct: 467 LIQGFCTHGDLLKAKDLVLQMMNKGMRPDIGCFNFIINNLCKLGRVMDAQNIFDFTISIG 526

Query: 294 LNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAM 353
           L+P+   YN+LMDGYCLVG+++ A  +F  M S G +  VV Y  L+NGYCK+  ++E +
Sbjct: 527 LHPNVMVYNTLMDGYCLVGKMENALRVFDVMVSAGIQPNVVVYGTLVNGYCKVGRIDEGL 586

Query: 354 SLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGL 413
           SL+R+I+  G++ +   YN +L GLFQAG+   A+  F EM    +  D  TY+I++ GL
Sbjct: 587 SLFREILHKGIKPSTTLYNIILHGLFQAGRTVPAKVKFHEMTESGIAMDRYTYSIVLGGL 646

Query: 414 CKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTV 473
            KN+C  EA+ LF  L     +  I   N +I G+ +  R++ A +LF  + + GLVP+V
Sbjct: 647 FKNSCSDEAILLFKELHAMNVKIDITTLNIMIAGMFQIRRVEEAKDLFASISRSGLVPSV 706

Query: 474 VTYSIMIHGLCRKGKLEKANDFLLYMEKNGC-APNVVTFNTLMHGFLQNNKTSKVVELLH 532
           VTYSIM+  L ++G +E+A+D    ME  GC  PN    N ++   L+  +  +    L 
Sbjct: 707 VTYSIMMTNLIKEGLVEEADDMFSSMENAGCEQPNSQLLNHVVRELLEKREIVRAGTYLS 766

Query: 533 KMAEPERNLVPDDTTFSIVVDLLA 556
           K+   ER+   D +T ++++DL +
Sbjct: 767 KI--DERSFSLDHSTTTLLIDLFS 788



 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 136/517 (26%), Positives = 249/517 (48%), Gaps = 52/517 (10%)

Query: 79  NLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATW 138
           NLL G     R  +A+     ++  +G +PD  +  I++       + LC + +  +A  
Sbjct: 148 NLLRGLCEAKRTAEALDILLHRMPHLGCVPDVFSYCIVL-------KSLCSDRKSGQADE 200

Query: 139 LFKNMIAFGV--RPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSY 196
           L + M   G    P+ + Y T+I+GF + G+++ A  L  +MV    + G+    ++ +Y
Sbjct: 201 LLRMMAEGGAVCLPNAVAYNTVIDGFFKEGDVNKACDLFNEMV----QRGI--SPDLSTY 254

Query: 197 SIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLD 256
           + ++++LCK   +DKA+ +  +M  +G+ P      +LI+G+   G W+E   +  +M  
Sbjct: 255 NCVVNALCKARAMDKAEAILRQMVDKGVLPDNWTYNSLIYGYSSTGQWKEAVRVSKKMTS 314

Query: 257 LGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGY----CLV- 311
            G  P+++T N ++  LCK GKI +A  + + M  +G   D F+Y  +++GY    CLV 
Sbjct: 315 QGILPDVVTLNSLMASLCKHGKIKDARDVFDSMAMKGQKTDIFSYKIMLNGYATKGCLVD 374

Query: 312 ------------------------------GRIDTAREIFLSMHSKGCKHTVVSYNILIN 341
                                         G +D A  IF  M  +G +  VV+Y+ +I 
Sbjct: 375 LTELFNLMLSDGIAPDSHIFNVLIKAYAKCGMLDRATIIFNEMREQGVEPDVVTYSTVIA 434

Query: 342 GYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEP 401
             C+I  +++A+  + Q+I  GV  ++ TY+ L+ G    G    A+ L  +M    + P
Sbjct: 435 ALCRIGKMDDAVEKFNQMIDQGVAPSISTYHFLIQGFCTHGDLLKAKDLVLQMMNKGMRP 494

Query: 402 DLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELF 461
           D+  +N +I+ LCK   V +A  +F           + ++N L+DG C  G+++NA  +F
Sbjct: 495 DIGCFNFIINNLCKLGRVMDAQNIFDFTISIGLHPNVMVYNTLMDGYCLVGKMENALRVF 554

Query: 462 HKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQN 521
             +   G+ P VV Y  +++G C+ G++++       +   G  P+   +N ++HG  Q 
Sbjct: 555 DVMVSAGIQPNVVVYGTLVNGYCKVGRIDEGLSLFREILHKGIKPSTTLYNIILHGLFQA 614

Query: 522 NKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKD 558
            +T       H+M E    +  D  T+SIV+  L K+
Sbjct: 615 GRTVPAKVKFHEMTES--GIAMDRYTYSIVLGGLFKN 649



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 132/448 (29%), Positives = 222/448 (49%), Gaps = 12/448 (2%)

Query: 72  SPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVEN 131
           SP + ++ +L     +       ++F+ +++  GL  D + ++ L+       RGLC   
Sbjct: 105 SPTLHTYGILMDCCTRAHRPKLTLAFFGQVLKTGLGIDTIMISNLL-------RGLCEAK 157

Query: 132 RIKEA-TWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISK 190
           R  EA   L   M   G  PDV +Y  ++   C       A  L + M  G    G +  
Sbjct: 158 RTAEALDILLHRMPHLGCVPDVFSYCIVLKSLCSDRKSGQADELLRMMAEG----GAVCL 213

Query: 191 TNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGL 250
            N  +Y+ +ID   KEG V+KA +LF EM  RGI+P +     +++  C A   ++   +
Sbjct: 214 PNAVAYNTVIDGFFKEGDVNKACDLFNEMVQRGISPDLSTYNCVVNALCKARAMDKAEAI 273

Query: 251 FIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCL 310
             +M+D G  P+  T+N +I      G+  EA  + + M  +G+ PD  T NSLM   C 
Sbjct: 274 LRQMVDKGVLPDNWTYNSLIYGYSSTGQWKEAVRVSKKMTSQGILPDVVTLNSLMASLCK 333

Query: 311 VGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVIT 370
            G+I  AR++F SM  KG K  + SY I++NGY     + +   L+  ++S+G+      
Sbjct: 334 HGKIKDARDVFDSMAMKGQKTDIFSYKIMLNGYATKGCLVDLTELFNLMLSDGIAPDSHI 393

Query: 371 YNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLE 430
           +N L+    + G    A  +F+EM+   VEPD+ TY+ +I  LC+   + +AV+ F+ + 
Sbjct: 394 FNVLIKAYAKCGMLDRATIIFNEMREQGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQMI 453

Query: 431 MNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLE 490
                  I  ++ LI G C  G L  A +L  ++  KG+ P +  ++ +I+ LC+ G++ 
Sbjct: 454 DQGVAPSISTYHFLIQGFCTHGDLLKAKDLVLQMMNKGMRPDIGCFNFIINNLCKLGRVM 513

Query: 491 KANDFLLYMEKNGCAPNVVTFNTLMHGF 518
            A +   +    G  PNV+ +NTLM G+
Sbjct: 514 DAQNIFDFTISIGLHPNVMVYNTLMDGY 541



 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 31/122 (25%), Positives = 58/122 (47%), Gaps = 1/122 (0%)

Query: 438 IEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLL 497
           +  +  L+D   +A R       F ++ + GL    +  S ++ GLC   +  +A D LL
Sbjct: 108 LHTYGILMDCCTRAHRPKLTLAFFGQVLKTGLGIDTIMISNLLRGLCEAKRTAEALDILL 167

Query: 498 Y-MEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLA 556
           + M   GC P+V ++  ++     + K+ +  ELL  MAE     +P+   ++ V+D   
Sbjct: 168 HRMPHLGCVPDVFSYCIVLKSLCSDRKSGQADELLRMMAEGGAVCLPNAVAYNTVIDGFF 227

Query: 557 KD 558
           K+
Sbjct: 228 KE 229



 Score = 40.0 bits (92), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 29/109 (26%), Positives = 54/109 (49%), Gaps = 7/109 (6%)

Query: 457 AWELFHKLPQ----KGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFN 512
           A  LF+++ +    + L PT+ TY I++    R  + +    F   + K G   + +  +
Sbjct: 88  AVALFNRVSRAHGPRVLSPTLHTYGILMDCCTRAHRPKLTLAFFGQVLKTGLGIDTIMIS 147

Query: 513 TLMHGFLQNNKTSKVVE-LLHKMAEPERNLVPDDTTFSIVVDLLAKDEK 560
            L+ G  +  +T++ ++ LLH+M  P    VPD  ++ IV+  L  D K
Sbjct: 148 NLLRGLCEAKRTAEALDILLHRM--PHLGCVPDVFSYCIVLKSLCSDRK 194


>gi|60390261|sp|Q76C99.1|RF1_ORYSI RecName: Full=Protein Rf1, mitochondrial; AltName: Full=Fertility
           restorer; AltName: Full=Protein PPR; AltName:
           Full=Restorer for CMS; Flags: Precursor
 gi|33859440|dbj|BAC77665.2| PPR protein [Oryza sativa Indica Group]
 gi|33859442|dbj|BAC77666.2| Rf1 [Oryza sativa Indica Group]
 gi|41152689|dbj|BAD08214.1| fertility restorer [Oryza sativa Indica Group]
 gi|46091159|dbj|BAD13708.1| PPR protein [Oryza sativa Indica Group]
 gi|47550657|dbj|BAD20283.1| restorer for CMS [Oryza sativa Indica Group]
          Length = 791

 Score =  290 bits (742), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 173/520 (33%), Positives = 269/520 (51%), Gaps = 39/520 (7%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
           P   ++N +      +      I F +K+ S G+ PD +T ++L++        LC   R
Sbjct: 264 PDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDY-------LCKNGR 316

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL----------------------SV 170
             EA  +F +M   G++P++ TYGTL+ G+   G L                      S+
Sbjct: 317 CMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSI 376

Query: 171 ALRLHKKMVSGDYENGLISKT-------NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRG 223
            +  + K    D    + SK        N  +Y  +I  LCK G V+ A   F +M   G
Sbjct: 377 LICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEG 436

Query: 224 INPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEAN 283
           ++P  +V  +LIHG C    WE    L +EMLD G   N + FN +ID  CK G++ E+ 
Sbjct: 437 LSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESE 496

Query: 284 GLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGY 343
            L ELM++ G+ P+  TYN+L++GYCL G++D A ++   M S G K   V+Y+ LINGY
Sbjct: 497 KLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGY 556

Query: 344 CKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDL 403
           CKI  +E+A+ L++++ S+GV   +ITYN +L GLFQ  +   A++L+  +     + +L
Sbjct: 557 CKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIEL 616

Query: 404 STYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHK 463
           STYNI++ GLCKN    +A+++F  L +   +     FN +ID L K GR D A +LF  
Sbjct: 617 STYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVA 676

Query: 464 LPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNK 523
               GLVP   TY +M   +  +G LE+ +   L ME NGC  +    N ++   LQ  +
Sbjct: 677 FSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGE 736

Query: 524 TSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
            ++    L  + E   +L  + +T S+ +DLL+   KY E
Sbjct: 737 ITRAGTYLSMIDEKHFSL--EASTASLFIDLLSGG-KYQE 773



 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 154/537 (28%), Positives = 247/537 (45%), Gaps = 56/537 (10%)

Query: 58  EARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIG---LLPDFLTLN 114
           +AR+ F  +        I   N     VA++    A +S Y ++   G   + PD  T  
Sbjct: 33  DARHVFDELLRRGRGASIYGLNRALADVARDSPA-AAVSRYNRMARAGADEVTPDLCTYG 91

Query: 115 ILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRL 174
           ILI C        C   R+        N+I  G R D I +  L+ G C     S A+ +
Sbjct: 92  ILIGC-------CCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDI 144

Query: 175 HKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEM---KGRGINPAVVVC 231
             + ++   E G I   N+FSY+I++  LC E    +A EL   M   +G G  P VV  
Sbjct: 145 VLRRMT---ELGCIP--NVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSY 199

Query: 232 TTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQ 291
           TT+I+GF   G+ ++    + EMLD G  P+++T+N +I  LCK   +++A  +L  M++
Sbjct: 200 TTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVK 259

Query: 292 RGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEE 351
            G+ PD  TYNS++ GYC  G+   A      M S G +  VV+Y++L++  CK     E
Sbjct: 260 NGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCME 319

Query: 352 AMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILID 411
           A  ++  +   G++  + TY TLL G    G       L D M    + PD   ++ILI 
Sbjct: 320 ARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILIC 379

Query: 412 GLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVP 471
              K   V +A+ +F  +           +  +I  LCK+GR+++A   F ++  +GL P
Sbjct: 380 AYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSP 439

Query: 472 TVVTYSIMIHGLCRKGKLEKANDFLL---------------------------------- 497
             + Y+ +IHGLC   K E+A + +L                                  
Sbjct: 440 GNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLF 499

Query: 498 -YMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
             M + G  PNV+T+NTL++G+    K  + ++LL  M      L P+  T+S +++
Sbjct: 500 ELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSV--GLKPNTVTYSTLIN 554


>gi|242089061|ref|XP_002440363.1| hypothetical protein SORBIDRAFT_09g030360 [Sorghum bicolor]
 gi|241945648|gb|EES18793.1| hypothetical protein SORBIDRAFT_09g030360 [Sorghum bicolor]
          Length = 715

 Score =  290 bits (742), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 160/501 (31%), Positives = 271/501 (54%), Gaps = 39/501 (7%)

Query: 92  DAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPD 151
           +  +   +K+   GL PD +T ++LI+ +       C   R  EA  +F +M+  G  PD
Sbjct: 207 EEAVRLLKKMSGGGLQPDVVTYSLLIDYY-------CKIGRCTEARNIFDSMVRRGQNPD 259

Query: 152 VITYGTLINGFCRTGNLS-----VALRLHKKMVSGDY----------ENGLISKT----- 191
             TY TL++G+   G L      +AL +   +   D+          +N  + K      
Sbjct: 260 AYTYRTLLHGYATKGALVDMHDLLALMIQDGIPLEDHVFNILIRAYAKNETLDKAMTAFI 319

Query: 192 ---------NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAG 242
                    N+ +Y+ +ID LCK G V+ A   F +M   G++P ++  T+LIHG C  G
Sbjct: 320 EMRQKGFSPNVVTYTTVIDILCKAGRVEDAVSHFSQMVSEGLSPDIITFTSLIHGLCTIG 379

Query: 243 NWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYN 302
            W++V  L  EM++ G  PN +  N ++D LCK G++ EA+   + +I  G+ PD  +Y 
Sbjct: 380 EWKKVEKLSFEMINRGIHPNAIFLNTIMDSLCKEGRVLEAHDFFDQIIHVGVKPDVVSYT 439

Query: 303 SLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISN 362
            L+DGYCL G++D + ++   M S G +   V+Y+ L+NGYCK   V++A++LYR++ S 
Sbjct: 440 ILIDGYCLDGKMDESIKLLGRMVSIGLRPDNVTYSALLNGYCKNGRVDDALALYREMFSK 499

Query: 363 GVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEA 422
            V+   ITYN +L GLF AG+   A++ + ++    ++  ++TYNI++ GLC+N+ V EA
Sbjct: 500 DVKPNAITYNIILHGLFHAGRVVAAREFYMKIVDSGIQLGINTYNIVLGGLCENSFVDEA 559

Query: 423 VKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHG 482
           +++F  L   +F+  +  FN +I GL K GR+ +A  LF  +   GLVP  + Y +MI  
Sbjct: 560 LRMFQGLRSKEFQLEVRTFNIMIVGLLKVGRIGDAKSLFSAILPSGLVPDAIIYGLMIQS 619

Query: 483 LCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLV 542
              +G LE++++  L MEKNGC  N  T N ++   L+     +    L K+ E E ++ 
Sbjct: 620 HIEEGLLEESDELFLSMEKNGCTANSRTLNAIVRKLLEKGDVRRAGTYLTKIDEKEYSV- 678

Query: 543 PDDTTFSIVVDLLAKDEKYHE 563
             + + ++++  +  + KY +
Sbjct: 679 --EASTAVLLISIVSERKYQK 697



 Score =  213 bits (541), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 154/566 (27%), Positives = 244/566 (43%), Gaps = 93/566 (16%)

Query: 29  RQIAAVSSPETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKN 88
           R +  V     QL   + E  +SG + L +A   F  +     S  + +FN +   VA  
Sbjct: 3   RVVKPVHRTCLQLERIIVEQHRSGSLGLEDALNLFDELLPRARSASVHAFNRVLTVVA-- 60

Query: 89  RHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGV 148
            H D+  S                          +  G  +      A  LF  M   GV
Sbjct: 61  -HGDSSSS--------------------------QRHGAAL------AVSLFNTMAQVGV 87

Query: 149 RP---DVITYGTLINGFCRTGNLSVAL----RLHKKMVSGDYENGLISKTNIFSYSIIID 201
                D  T+G LI  FC  G L  AL    R  +  V    ++G     N+ SY+++I+
Sbjct: 88  NKLATDACTFGILIRCFCNVGLLDFALEEESRGSRAAVHMMADDGYNCPPNVLSYNMVIN 147

Query: 202 SLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGP-- 259
            L KEG VDKA  LF EM G+G  P +V   ++I G C A   ++   +  +M D G   
Sbjct: 148 GLFKEGEVDKAYTLFHEMLGQGFPPNIVTYNSVIDGLCKAQAMDKAEAVLQQMFDKGQLE 207

Query: 260 --------------RPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLM 305
                         +P+++T++++ID  CK G+  EA  + + M++RG NPD +TY +L+
Sbjct: 208 EAVRLLKKMSGGGLQPDVVTYSLLIDYYCKIGRCTEARNIFDSMVRRGQNPDAYTYRTLL 267

Query: 306 DGYCLVG-----------------------------------RIDTAREIFLSMHSKGCK 330
            GY   G                                    +D A   F+ M  KG  
Sbjct: 268 HGYATKGALVDMHDLLALMIQDGIPLEDHVFNILIRAYAKNETLDKAMTAFIEMRQKGFS 327

Query: 331 HTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKL 390
             VV+Y  +I+  CK   VE+A+S + Q++S G+   +IT+ +L+ GL   G+    +KL
Sbjct: 328 PNVVTYTTVIDILCKAGRVEDAVSHFSQMVSEGLSPDIITFTSLIHGLCTIGEWKKVEKL 387

Query: 391 FDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCK 450
             EM    + P+    N ++D LCK   V EA   F  +     +  +  +  LIDG C 
Sbjct: 388 SFEMINRGIHPNAIFLNTIMDSLCKEGRVLEAHDFFDQIIHVGVKPDVVSYTILIDGYCL 447

Query: 451 AGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVT 510
            G++D + +L  ++   GL P  VTYS +++G C+ G+++ A      M      PN +T
Sbjct: 448 DGKMDESIKLLGRMVSIGLRPDNVTYSALLNGYCKNGRVDDALALYREMFSKDVKPNAIT 507

Query: 511 FNTLMHGFLQNNKTSKVVELLHKMAE 536
           +N ++HG     +     E   K+ +
Sbjct: 508 YNIILHGLFHAGRVVAAREFYMKIVD 533



 Score = 69.7 bits (169), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 64/247 (25%), Positives = 107/247 (43%), Gaps = 41/247 (16%)

Query: 347 LNVEEAMSLYRQIISNGVRQTVITYNTLL-------SGLFQAGQAGYAQKLFDEMKLYNV 399
           L +E+A++L+ +++      +V  +N +L       S   Q   A  A  LF+ M    V
Sbjct: 28  LGLEDALNLFDELLPRARSASVHAFNRVLTVVAHGDSSSSQRHGAALAVSLFNTMAQVGV 87

Query: 400 EP---DLSTYNILIDGLCKNNCVQEAVK--------LFHMLEMNKFEFGIEI--FNCLID 446
                D  T+ ILI   C    +  A++          HM+  + +     +  +N +I+
Sbjct: 88  NKLATDACTFGILIRCFCNVGLLDFALEEESRGSRAAVHMMADDGYNCPPNVLSYNMVIN 147

Query: 447 GLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAP 506
           GL K G +D A+ LFH++  +G  P +VTY+ +I GLC+   ++KA   L  M   G   
Sbjct: 148 GLFKEGEVDKAYTLFHEMLGQGFPPNIVTYNSVIDGLCKAQAMDKAEAVLQQMFDKG--- 204

Query: 507 NVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSA 566
                           +  + V LL KM+     L PD  T+S+++D   K  +  E   
Sbjct: 205 ----------------QLEEAVRLLKKMSGG--GLQPDVVTYSLLIDYYCKIGRCTEARN 246

Query: 567 VSKSSYR 573
           +  S  R
Sbjct: 247 IFDSMVR 253



 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 53/223 (23%), Positives = 96/223 (43%), Gaps = 31/223 (13%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CK+G   +++A   +  M      P   ++N++   +       A   FY K+V  G+  
Sbjct: 481 CKNG--RVDDALALYREMFSKDVKPNAITYNIILHGLFHAGRVVAAREFYMKIVDSGIQL 538

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
              T NI++        GLC  + + EA  +F+ + +   + +V T+  +I G  + G +
Sbjct: 539 GINTYNIVLG-------GLCENSFVDEALRMFQGLRSKEFQLEVRTFNIMIVGLLKVGRI 591

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
             A    K + S    +GL+    I  Y ++I S  +EGL++++ ELFL M+  G     
Sbjct: 592 GDA----KSLFSAILPSGLVPDAII--YGLMIQSHIEEGLLEESDELFLSMEKNG----- 640

Query: 229 VVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMID 271
                      C  N   +N +  ++L+ G      T+   ID
Sbjct: 641 -----------CTANSRTLNAIVRKLLEKGDVRRAGTYLTKID 672


>gi|357463605|ref|XP_003602084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355491132|gb|AES72335.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 579

 Score =  290 bits (742), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 161/469 (34%), Positives = 263/469 (56%), Gaps = 16/469 (3%)

Query: 66  MTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKER 125
           M  + P+PPI  FN +  ++ K  HY   IS +R+L   G+ P  +TL IL+NC+     
Sbjct: 1   MLQISPTPPILQFNHILASLVKINHYPTAISLFRQLEFNGIKPSIVTLTILMNCY----- 55

Query: 126 GLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYEN 185
             C    I     +   ++  G  P+ IT+ TLI G C  G    AL  H  +V+  +  
Sbjct: 56  --CHTGGITFLFSILTKILKMGYEPNSITFTTLIKGMCLNGQAYEALLFHDHVVAHGF-- 111

Query: 186 GLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWE 245
               K +  SY+I+++ LCK G    A ++   ++   +N  VV+ +T+I   C      
Sbjct: 112 ----KLDQVSYAILMNGLCKMGETRAAMQM---LRKTWVNADVVMYSTIIDSLCKGKFVT 164

Query: 246 EVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLM 305
           +   L+ EM+  G  PN+ TF++++D LCK  K  +A  LL +M+++G+ P+  TY ++M
Sbjct: 165 DAYRLYSEMIAKGIFPNVYTFSILVDALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIM 224

Query: 306 DGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVR 365
           DGYCLV +++ A  IF  M  +G +  V  YNI+ING CK   V+EAM+L++++    + 
Sbjct: 225 DGYCLVNQVNKALNIFNVMVQEGVEPNVWCYNIIINGLCKKKRVDEAMNLFKEMHWKKIN 284

Query: 366 QTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKL 425
             V+TYN L+ GL + G+   + +L DEM+      D+ TYN L+  LCKN+ + +A+ L
Sbjct: 285 PDVVTYNILIDGLCKLGKISTSLELVDEMRSIGKTVDIITYNSLLHALCKNHHLDQAITL 344

Query: 426 FHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCR 485
              ++    +  +  +  LIDGLCK GRL++A+ +F ++  +G   TV TY++MI+GLC+
Sbjct: 345 VKEIKDQGIQPNVCTYTTLIDGLCKDGRLEDAYVIFQEILTEGYHITVWTYNVMINGLCK 404

Query: 486 KGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKM 534
           KG  ++A   L  ME N C P+ V++ T+++   +  +T K  +LL  M
Sbjct: 405 KGLFDEALALLSRMEDNACIPDAVSYETIIYALSEKGETVKTNKLLCAM 453



 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 106/389 (27%), Positives = 204/389 (52%), Gaps = 5/389 (1%)

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
           I  ++ I+ SL K      A  LF +++  GI P++V  T L++ +C  G    +  +  
Sbjct: 10  ILQFNHILASLVKINHYPTAISLFRQLEFNGIKPSIVTLTILMNCYCHTGGITFLFSILT 69

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
           ++L +G  PN +TF  +I  +C  G+  EA    + ++  G   D+ +Y  LM+G C +G
Sbjct: 70  KILKMGYEPNSITFTTLIKGMCLNGQAYEALLFHDHVVAHGFKLDQVSYAILMNGLCKMG 129

Query: 313 RIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYN 372
               A ++   +        VV Y+ +I+  CK   V +A  LY ++I+ G+   V T++
Sbjct: 130 ETRAAMQM---LRKTWVNADVVMYSTIIDSLCKGKFVTDAYRLYSEMIAKGIFPNVYTFS 186

Query: 373 TLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMN 432
            L+  L +  +   A  L   M    V+P++ TY  ++DG C  N V +A+ +F+++   
Sbjct: 187 ILVDALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQVNKALNIFNVMVQE 246

Query: 433 KFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKA 492
             E  +  +N +I+GLCK  R+D A  LF ++  K + P VVTY+I+I GLC+ GK+  +
Sbjct: 247 GVEPNVWCYNIIINGLCKKKRVDEAMNLFKEMHWKKINPDVVTYNILIDGLCKLGKISTS 306

Query: 493 NDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVV 552
            + +  M   G   +++T+N+L+H   +N+   + + L+ ++ +  + + P+  T++ ++
Sbjct: 307 LELVDEMRSIGKTVDIITYNSLLHALCKNHHLDQAITLVKEIKD--QGIQPNVCTYTTLI 364

Query: 553 DLLAKDEKYHECSAVSKSSYRACLYVTIF 581
           D L KD +  +   + +       ++T++
Sbjct: 365 DGLCKDGRLEDAYVIFQEILTEGYHITVW 393



 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 66/241 (27%), Positives = 121/241 (50%), Gaps = 13/241 (5%)

Query: 55  NLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLN 114
            +N+A   F  M      P +  +N++   + K +  D  ++ ++++    + PD +T N
Sbjct: 232 QVNKALNIFNVMVQEGVEPNVWCYNIIINGLCKKKRVDEAMNLFKEMHWKKINPDVVTYN 291

Query: 115 ILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRL 174
           ILI+       GLC   +I  +  L   M + G   D+ITY +L++  C+  +L  A+ L
Sbjct: 292 ILID-------GLCKLGKISTSLELVDEMRSIGKTVDIITYNSLLHALCKNHHLDQAITL 344

Query: 175 HKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTL 234
            K++     + G+  + N+ +Y+ +ID LCK+G ++ A  +F E+   G +  V     +
Sbjct: 345 VKEI----KDQGI--QPNVCTYTTLIDGLCKDGRLEDAYVIFQEILTEGYHITVWTYNVM 398

Query: 235 IHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGL 294
           I+G C  G ++E   L   M D    P+ +++  +I  L + G+  + N LL  MI RGL
Sbjct: 399 INGLCKKGLFDEALALLSRMEDNACIPDAVSYETIIYALSEKGETVKTNKLLCAMIVRGL 458

Query: 295 N 295
           +
Sbjct: 459 S 459


>gi|47550658|dbj|BAD20284.1| hypothetical protein [Oryza sativa Indica Group]
          Length = 791

 Score =  290 bits (741), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 169/522 (32%), Positives = 270/522 (51%), Gaps = 40/522 (7%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
           P   ++N +      +      I F +K+ S G+ PD +T N L++        LC   R
Sbjct: 264 PNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDY-------LCKNGR 316

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL----------------------SV 170
             EA  +F +M   G+ PD+ TY TL+ G+   G L                      ++
Sbjct: 317 STEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNI 376

Query: 171 ALRLHKKMVSGDYENGLISKT-------NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRG 223
            +  + K    D    + SK        N+ +Y  +I  LCK G VD A   F +M   G
Sbjct: 377 LICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEG 436

Query: 224 INPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEAN 283
           + P ++V T+LIH  C    W++   L +EMLD G   N + FN +I   CK G++ E+ 
Sbjct: 437 LTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESE 496

Query: 284 GLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGY 343
            L +LM++ G+ P+  TY++L+DGYCL G++D A ++  SM S G K   V+YN LINGY
Sbjct: 497 KLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGY 556

Query: 344 CKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDL 403
           C++  +++A++L+++++S+GV   +ITYN +L GLF   +   A++L+  +     + +L
Sbjct: 557 CRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLEL 616

Query: 404 STYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHK 463
           STYNI++ GLCKNN   EA+++F  L +   +     FN +I  L K GR D A +LF  
Sbjct: 617 STYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFVA 676

Query: 464 LPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNK 523
               GLVP   TY +M   +  +G LE+ +     ME NGC  +    N ++   LQ  +
Sbjct: 677 FSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFFSMEDNGCTVDSGMLNFIVRELLQRGE 736

Query: 524 TSKVVELLHKMAEPERNLVPDDTTFSIVVDLLA--KDEKYHE 563
            ++    L  + E   +L  + +T S+ +DLL+  K ++YH 
Sbjct: 737 ITRAGTYLSMIDEKHFSL--EASTASLFIDLLSGGKYQEYHR 776



 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 145/521 (27%), Positives = 241/521 (46%), Gaps = 56/521 (10%)

Query: 72  SPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVEN 131
           +P + ++ +L G   +    D   +    +V  G   + +T   L+       +GLC + 
Sbjct: 84  TPTVHTYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLL-------KGLCADK 136

Query: 132 RIKEA-TWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISK 190
           R  +A   + + M      PDV +   L+ G C       AL L   M     + G  S 
Sbjct: 137 RTSDAMDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMAD---DRGGGSA 193

Query: 191 TNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGL 250
            ++ SY+ +I+   KEG  DKA   + EM  R I+P VV  +++I   C     ++   +
Sbjct: 194 PDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEV 253

Query: 251 FIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCL 310
              M+  G  PN +T+N ++   C   +  EA G L+ M   G+ PD  TYNSLMD  C 
Sbjct: 254 LTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCK 313

Query: 311 VGRIDTAREIFLSMHSKGCKHTVVSY---------------------------------- 336
            GR   AR+IF SM  +G +  + +Y                                  
Sbjct: 314 NGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHV 373

Query: 337 -NILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMK 395
            NILI  Y K   V+EAM ++ ++  +G+   V+TY  ++  L ++G    A   F++M 
Sbjct: 374 FNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMI 433

Query: 396 LYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEI----FNCLIDGLCKA 451
              + P++  Y  LI  LC  +   +A +L  +LEM   + GI +    FN +I   CK 
Sbjct: 434 DEGLTPNIIVYTSLIHSLCIFDKWDKAEEL--ILEM--LDRGICLNTIFFNSIIHSHCKE 489

Query: 452 GRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTF 511
           GR+  + +LF  + + G+ P V+TYS +I G C  GK+++A   L  M   G  P+ VT+
Sbjct: 490 GRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTY 549

Query: 512 NTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVV 552
           NTL++G+ + ++    + L  +M      + P+  T++I++
Sbjct: 550 NTLINGYCRVSRMDDALALFKEMVSS--GVSPNIITYNIIL 588



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 126/439 (28%), Positives = 204/439 (46%), Gaps = 35/439 (7%)

Query: 148 VRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKT---------------- 191
           V P V TYG LI   CR G L +       +V   +    I+ T                
Sbjct: 83  VTPTVHTYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAM 142

Query: 192 --------------NIFSYSIIIDSLCKEGLVDKAKELFLEM---KGRGINPAVVVCTTL 234
                         ++FS +I++  LC E    +A EL   M   +G G  P VV  TT+
Sbjct: 143 DIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTV 202

Query: 235 IHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGL 294
           I+GF   G+ ++    + EMLD    P+++T++ +I  LCKG  +++A  +L  M++ G+
Sbjct: 203 INGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGV 262

Query: 295 NPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMS 354
            P+  TYNS++ GYC   +   A      M S G +  VV+YN L++  CK     EA  
Sbjct: 263 MPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARK 322

Query: 355 LYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLC 414
           ++  +   G+   + TY TLL G    G       L D M    + PD   +NILI    
Sbjct: 323 IFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYA 382

Query: 415 KNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVV 474
           K   V EA+ +F  +  +     +  +  +I  LCK+G +D+A   F ++  +GL P ++
Sbjct: 383 KQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNII 442

Query: 475 TYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKM 534
            Y+ +IH LC   K +KA + +L M   G   N + FN+++H   +  +  +  +L   M
Sbjct: 443 VYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLM 502

Query: 535 AEPERNLVPDDTTFSIVVD 553
                 + P+  T+S ++D
Sbjct: 503 VRI--GVKPNVITYSTLID 519



 Score = 42.4 bits (98), Expect = 0.76,   Method: Compositional matrix adjust.
 Identities = 30/111 (27%), Positives = 56/111 (50%), Gaps = 6/111 (5%)

Query: 457 AWELFHKLPQKG---LVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNT 513
           A   ++++ + G   + PTV TY I+I   CR G+L+     L  + K G     +TF  
Sbjct: 68  AVSRYNRMARAGAGKVTPTVHTYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTP 127

Query: 514 LMHGFLQNNKTSKVVEL-LHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
           L+ G   + +TS  +++ L +M E   + +PD  + +I++  L  + +  E
Sbjct: 128 LLKGLCADKRTSDAMDIVLRRMTEL--SCMPDVFSCTILLKGLCDENRSQE 176


>gi|357130032|ref|XP_003566662.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 859

 Score =  290 bits (741), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 163/505 (32%), Positives = 270/505 (53%), Gaps = 41/505 (8%)

Query: 90  HYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVR 149
           H+      +RK+ S GL+P  +T N  ++        LC   R K+A  +F+ M   G  
Sbjct: 349 HWKESAKMFRKMTSKGLIPGIVTFNSFMS-------SLCKHGRSKDAEEIFQYMTTKGHM 401

Query: 150 PDVITYGTLINGFCRTGNLSVALRLHKKM---------------VSGDYENGLIS----- 189
           PD+++Y  L++G+   G  +    L   M               +S   + G++      
Sbjct: 402 PDLVSYSILLHGYATEGRFADMNNLFHSMADKGIVANCHCFNILISAHAKRGMMDEAMLV 461

Query: 190 ---------KTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCC 240
                    + ++ +YS +I + C+ G +  A E F +M   G+ P  VV  +LIHGFC 
Sbjct: 462 FTEMQGQGVRPDVVTYSTLISAFCRMGRLADAMEKFSQMISIGLEPNTVVYHSLIHGFCM 521

Query: 241 AGNWEEVNGLFIEMLDLG-PRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRF 299
            G+  +   L  EM+  G PRPN++ F+ +I  LC  G++ +A+ +  L+I  G  P   
Sbjct: 522 HGDLVKAKELVSEMMSKGIPRPNIVFFSSIIHSLCNEGRVMDAHDVFNLVIHIGDRPTIV 581

Query: 300 TYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQI 359
           T+NSL+DGYCLVG+++ A  +  +M S G +  VV+YN L++GYCK   +++ + L+R++
Sbjct: 582 TFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTYNTLVSGYCKSGKIDDGLILFREM 641

Query: 360 ISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCV 419
           +   V+ T +TY+ +L GLF AG+   A+K+F EM       D+ TY IL+ GLC+N+  
Sbjct: 642 LHKKVKPTTVTYSIVLDGLFHAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLT 701

Query: 420 QEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIM 479
            EA+ LFH L     +F I I N +I+ L K  R + A +LF  +   GLVP V TY +M
Sbjct: 702 DEAITLFHKLGAMDCKFDITILNTVINALYKVRRREEANDLFAAISTSGLVPNVSTYGVM 761

Query: 480 IHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPER 539
           IH L ++G +E+A+     MEK+GCAP+    N ++   LQ      +V+  + M++ + 
Sbjct: 762 IHNLLKEGSVEEADTMFSSMEKSGCAPSSRLLNDIIRMLLQKG---DIVKAGYYMSKVDG 818

Query: 540 NLVP-DDTTFSIVVDLLAKDEKYHE 563
            ++  + +T S+++ L +   K+ E
Sbjct: 819 TIISLEASTTSLLMSLFSSKGKHRE 843



 Score =  178 bits (451), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 113/397 (28%), Positives = 192/397 (48%), Gaps = 12/397 (3%)

Query: 152 VITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDK 211
           V TYG L++  CR     +      +++      GL  +T     +  +  LC     D+
Sbjct: 156 VHTYGILMDCCCRARRPDLGPAFFARLLRA----GL--RTRTIEANTFLKCLCHAKRTDE 209

Query: 212 AKELFLE-MKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPR--PNLLTFNV 268
           A ++ L  M   G  P  +   T+I   C     +E   +   M   G R  P++++FN 
Sbjct: 210 AVDVLLHRMSDLGCVPNAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNT 269

Query: 269 MIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKG 328
           +I    K G++++A  L+  M+Q+G+ PD  TYNS++D  C    +D A  +   M  KG
Sbjct: 270 VIHGFFKQGEVSKACNLINEMVQKGVEPDVVTYNSIVDALCKARAMDKAELVLRQMVDKG 329

Query: 329 CKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQ 388
            +   ++Y  +I+GY    + +E+  ++R++ S G+   ++T+N+ +S L + G++  A+
Sbjct: 330 VEPDGLTYTAIIHGYSCSGHWKESAKMFRKMTSKGLIPGIVTFNSFMSSLCKHGRSKDAE 389

Query: 389 KLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGL 448
           ++F  M      PDL +Y+IL+ G        +   LFH +           FN LI   
Sbjct: 390 EIFQYMTTKGHMPDLVSYSILLHGYATEGRFADMNNLFHSMADKGIVANCHCFNILISAH 449

Query: 449 CKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNV 508
            K G +D A  +F ++  +G+ P VVTYS +I   CR G+L  A +    M   G  PN 
Sbjct: 450 AKRGMMDEAMLVFTEMQGQGVRPDVVTYSTLISAFCRMGRLADAMEKFSQMISIGLEPNT 509

Query: 509 VTFNTLMHGFLQNNKTSKVVELLHKMAE---PERNLV 542
           V +++L+HGF  +    K  EL+ +M     P  N+V
Sbjct: 510 VVYHSLIHGFCMHGDLVKAKELVSEMMSKGIPRPNIV 546



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 61/239 (25%), Positives = 113/239 (47%), Gaps = 5/239 (2%)

Query: 332 TVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYA-QKL 390
           +V +Y IL++  C+    +   + + +++  G+R   I  NT L  L  A +   A   L
Sbjct: 155 SVHTYGILMDCCCRARRPDLGPAFFARLLRAGLRTRTIEANTFLKCLCHAKRTDEAVDVL 214

Query: 391 FDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHML--EMNKFEFGIEIFNCLIDGL 448
              M      P+  +YN +I  LC ++  QEA+ +   +  E  +    +  FN +I G 
Sbjct: 215 LHRMSDLGCVPNAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGF 274

Query: 449 CKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNV 508
            K G +  A  L +++ QKG+ P VVTY+ ++  LC+   ++KA   L  M   G  P+ 
Sbjct: 275 FKQGEVSKACNLINEMVQKGVEPDVVTYNSIVDALCKARAMDKAELVLRQMVDKGVEPDG 334

Query: 509 VTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAV 567
           +T+  ++HG+  +    +  ++  KM    + L+P   TF+  +  L K  +  +   +
Sbjct: 335 LTYTAIIHGYSCSGHWKESAKMFRKMT--SKGLIPGIVTFNSFMSSLCKHGRSKDAEEI 391


>gi|242092708|ref|XP_002436844.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
 gi|241915067|gb|EER88211.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
          Length = 755

 Score =  290 bits (741), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 175/540 (32%), Positives = 275/540 (50%), Gaps = 40/540 (7%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CK+ +++   A+  F  M      P   ++N L         +  V+    ++ + GL P
Sbjct: 207 CKAQVVD--RAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMSTHGLEP 264

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           D +T  +L++        LC   R +EA   F +M   G++PDV  Y  L++G+   G L
Sbjct: 265 DCITYALLLDY-------LCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHGYATKGAL 317

Query: 169 SVA---------------LRLHKKMVSGDYENGLISKT--------------NIFSYSII 199
           S                  R+   M     +  +I +               ++ S+  +
Sbjct: 318 SEMHSFLDLMVGNGVSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGAL 377

Query: 200 IDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGP 259
           ID+LCK G VD A   F +M   G+ P + V ++L++G C  G WE+   LF E+LD G 
Sbjct: 378 IDALCKLGRVDDAVLQFNQMINEGVTPNIFVFSSLVYGLCTVGKWEKAEELFFEVLDQGI 437

Query: 260 RPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTARE 319
             + + FN ++  LC  G++ EA  L++LMI+ G+ P+  +YN+L+ G+CL GRID A +
Sbjct: 438 CVDAVFFNTLMCNLCNEGRVMEAQRLIDLMIRVGVRPNVISYNTLVAGHCLTGRIDEAAK 497

Query: 320 IFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLF 379
           +   M S G K    +Y IL+ GYCK   V++A SL+R+++  GV   V TYNT+L GLF
Sbjct: 498 LLDVMVSNGLKPNEFTYTILLRGYCKARRVDDAYSLFREMLMKGVTPVVATYNTILHGLF 557

Query: 380 QAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIE 439
           Q G+   A +L+  M     + D+ TYNI+++GLCKNN V EA K+F  L     +    
Sbjct: 558 QTGRFSEANELYLNMINSRTKCDIYTYNIILNGLCKNNFVDEAFKMFRRLCSKDPQLDSV 617

Query: 440 IFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYM 499
            FN +I  L K GR ++A +LF  +   GLVP VVTY ++   L  +G L + +     M
Sbjct: 618 TFNIMIGALLKGGRKEDAMDLFATISAYGLVPDVVTYRLIAENLIEEGSLGEFDGLFSAM 677

Query: 500 EKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDE 559
           EK+G APN    N L+   L     S+    L+K+   E+N   + +T S+++ L ++ E
Sbjct: 678 EKSGTAPNSHMLNALVRRLLHRGDISRAGVYLYKL--DEKNFSLEASTTSMLISLYSRGE 735



 Score =  228 bits (582), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 155/530 (29%), Positives = 258/530 (48%), Gaps = 20/530 (3%)

Query: 29  RQIAAVSSPETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAK- 87
           R+++A +    +L   +    +SG + L+EA   F  + H      + +FN L   V++ 
Sbjct: 3   RRVSAAADRCLELERVIASRARSGSLGLDEALKLFDELLHCARPASVRAFNQLLTVVSRA 62

Query: 88  --NRHYDAVISFYRKLV---SIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKN 142
             +   + V+S + ++    S  + P+  T +ILI CF       C   R++     F  
Sbjct: 63  GCSSASERVVSLFTRMARECSSKVAPNACTYSILIGCF-------CRMGRLEHGFAAFGL 115

Query: 143 MIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDS 202
           ++  G R +VI    L+ G C    +  A  +    +S   E G     ++ +Y+ +I+ 
Sbjct: 116 ILKTGWRVNVIVISQLLKGLCDAKRVDEATDILLLRMS---EFG--CPPDVVAYNTVING 170

Query: 203 LCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPN 262
             +EG V+KA  LFLEM  +GI P VV  TT+I G C A   +   G+F +M+D G +P+
Sbjct: 171 FFREGQVEKAYNLFLEMMDQGIPPNVVTYTTVIDGLCKAQVVDRAKGVFQQMIDRGVKPD 230

Query: 263 LLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFL 322
             T+N +I      GK  E   +LE M   GL PD  TY  L+D  C  GR   AR  F 
Sbjct: 231 NGTYNCLIHGYLSTGKWKEVVQMLEEMSTHGLEPDCITYALLLDYLCKNGRCREARLFFD 290

Query: 323 SMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAG 382
           SM  KG K  V  Y IL++GY     + E  S    ++ NGV      +N +     +  
Sbjct: 291 SMFRKGIKPDVAIYAILLHGYATKGALSEMHSFLDLMVGNGVSPNRRIFNIMFCAYAKKA 350

Query: 383 QAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFN 442
               A  +F++M+   + PD+ ++  LID LCK   V +AV  F+ +        I +F+
Sbjct: 351 MIEEAMHIFNKMRQQGLSPDVVSFGALIDALCKLGRVDDAVLQFNQMINEGVTPNIFVFS 410

Query: 443 CLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKN 502
            L+ GLC  G+ + A ELF ++  +G+    V ++ ++  LC +G++ +A   +  M + 
Sbjct: 411 SLVYGLCTVGKWEKAEELFFEVLDQGICVDAVFFNTLMCNLCNEGRVMEAQRLIDLMIRV 470

Query: 503 GCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVV 552
           G  PNV+++NTL+ G     +  +  +LL  M      L P++ T++I++
Sbjct: 471 GVRPNVISYNTLVAGHCLTGRIDEAAKLLDVMV--SNGLKPNEFTYTILL 518



 Score = 47.4 bits (111), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 34/127 (26%), Positives = 57/127 (44%), Gaps = 9/127 (7%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
           N  LH   ++G    +EA   +  M + +    I ++N++   + KN   D     +R+L
Sbjct: 550 NTILHGLFQTG--RFSEANELYLNMINSRTKCDIYTYNIILNGLCKNNFVDEAFKMFRRL 607

Query: 102 VSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLING 161
            S     D +T NI+I         L    R ++A  LF  + A+G+ PDV+TY  +   
Sbjct: 608 CSKDPQLDSVTFNIMIG-------ALLKGGRKEDAMDLFATISAYGLVPDVVTYRLIAEN 660

Query: 162 FCRTGNL 168
               G+L
Sbjct: 661 LIEEGSL 667


>gi|83744088|gb|ABC42330.1| PPR protein [Oryza sativa Indica Group]
          Length = 791

 Score =  289 bits (739), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 174/520 (33%), Positives = 269/520 (51%), Gaps = 39/520 (7%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
           P   ++N +      +      I F +K+ S G+ PD +T ++L++        LC   R
Sbjct: 264 PDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDY-------LCKNGR 316

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMV------------- 179
             EA  +F +M   G++P++ TYGTL+ G+   G L     L   MV             
Sbjct: 317 CMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSI 376

Query: 180 -------SGDYENGLI--SKT-------NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRG 223
                   G  +  ++  SK        N  +Y  +I  LCK G V+ A   F +M   G
Sbjct: 377 LICAYANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEG 436

Query: 224 INPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEAN 283
           ++P  +V  +LIHG C    WE    L +EMLD G   N + FN +ID  CK G++ E+ 
Sbjct: 437 LSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESE 496

Query: 284 GLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGY 343
            L ELM++ G+ P+  TYN+L++GYCL G++D A ++   M S G K   V+Y+ LINGY
Sbjct: 497 KLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGY 556

Query: 344 CKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDL 403
           CKI  +E+A+ L++++ S+GV   +ITYN +L GLFQ  +   A++L+  +     + +L
Sbjct: 557 CKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIEL 616

Query: 404 STYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHK 463
           STYNI++ GLCKN    +A+++F  L +   +     FN +ID L K GR D A +LF  
Sbjct: 617 STYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVA 676

Query: 464 LPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNK 523
               GLVP   TY +M   +  +G LE+ +   L ME NGC  +    N ++   LQ  +
Sbjct: 677 FSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGE 736

Query: 524 TSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
            ++    L  + E   +L  + +T S+ +DLL+   KY E
Sbjct: 737 ITRAGTYLSMIDEKHFSL--EASTASLFIDLLSGG-KYQE 773



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 153/537 (28%), Positives = 246/537 (45%), Gaps = 56/537 (10%)

Query: 58  EARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIG---LLPDFLTLN 114
           +AR+ F  +        I   N     VA++    A +S Y ++   G   + PD  T  
Sbjct: 33  DARHVFDELLRRGRGASIYGLNRALADVARDSPA-AAVSRYNRMARAGADEVTPDLCTYG 91

Query: 115 ILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRL 174
           ILI C        C   R+        N+I  G R D I +  L+ G C     S A+ +
Sbjct: 92  ILIGC-------CCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDI 144

Query: 175 HKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEM---KGRGINPAVVVC 231
             + ++   E G I   N+FSY+I++  LC E    +A EL   M   +G G  P VV  
Sbjct: 145 VLRRMT---ELGCIP--NVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSY 199

Query: 232 TTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQ 291
           TT+I+GF   G+ ++    + EMLD G  P+++T+N +I  LCK   +++A  +L  M++
Sbjct: 200 TTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVK 259

Query: 292 RGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEE 351
            G+ PD  TYNS++ GYC  G+   A      M S G +  VV+Y++L++  CK     E
Sbjct: 260 NGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCME 319

Query: 352 AMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILID 411
           A  ++  +   G++  + TY TLL G    G       L D M    + PD   ++ILI 
Sbjct: 320 ARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILIC 379

Query: 412 GLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVP 471
                  V +A+ +F  +           +  +I  LCK+GR+++A   F ++  +GL P
Sbjct: 380 AYANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSP 439

Query: 472 TVVTYSIMIHGLCRKGKLEKANDFLL---------------------------------- 497
             + Y+ +IHGLC   K E+A + +L                                  
Sbjct: 440 GNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLF 499

Query: 498 -YMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
             M + G  PNV+T+NTL++G+    K  + ++LL  M      L P+  T+S +++
Sbjct: 500 ELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSV--GLKPNTVTYSTLIN 554


>gi|326527027|dbj|BAK04455.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 860

 Score =  289 bits (739), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 186/605 (30%), Positives = 299/605 (49%), Gaps = 75/605 (12%)

Query: 24  LFKSPRQIAAVSSPET-QLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLF 82
           LF+   +     SP     N  +H   K G     +A   F  MT     P + ++NL+ 
Sbjct: 250 LFQMMAKEGGACSPNVVAYNTVIHGFFKEG--ETGKACSLFHEMTRQGVKPDVVTYNLII 307

Query: 83  GAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGN--------------KERGL- 127
            A+ K R  D      R++ + G  PD +T N +I+ +                K RGL 
Sbjct: 308 DALCKARAMDKAELVLRQMTTNGAQPDTVTYNCMIHGYATLGRLKEAAKMFRKMKSRGLI 367

Query: 128 -------------CVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRL 174
                        C   R KEA  +F +M A G +PD+++Y TL++G+   G  +  + L
Sbjct: 368 PNIVICNSFLASLCKHGRSKEAAEIFDSMTAKGHKPDIVSYCTLLHGYASEGWFADMIGL 427

Query: 175 HKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTT- 233
              M S    NG+ +   +F+  I+I +  K G+VD A  +F EM+ +G++P VV  +T 
Sbjct: 428 FNSMKS----NGIAADCRVFN--ILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTV 481

Query: 234 ----------------------------------LIHGFCCAGNWEEVNGLFIEMLDLG- 258
                                             +I GFC  G   +   L  EM++ G 
Sbjct: 482 ISAFSRMGRLTDAMEKFNQMVARGIQPNTAVYHSIIQGFCMHGGLVKAKELVSEMINKGI 541

Query: 259 PRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAR 318
           PRP+++ FN +I+ LCK G++ +A+ + +L+   G  PD  T+ SL+DGYCLVG++D A 
Sbjct: 542 PRPDIVFFNSVINSLCKDGRVMDAHDIFDLVTDIGERPDVITFTSLIDGYCLVGKMDKAF 601

Query: 319 EIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGL 378
           +I  +M   G +  +V+Y+ L++GY K   + + ++L+R++   GV+   +TY  +L+GL
Sbjct: 602 KILDAMEVVGVETDIVTYSTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGL 661

Query: 379 FQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGI 438
           F+AG+   A+K F EM        +S Y I++ GLC+NNC  EA+ LF  L     +F I
Sbjct: 662 FRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSI 721

Query: 439 EIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLY 498
            I N +I+ + K  R + A ELF  +   GL+P   TY +MI  L + G +E AN+    
Sbjct: 722 TILNTMINAMYKVQRKEEAKELFATISASGLLPNESTYGVMIINLLKDGAVEDANNMFSS 781

Query: 499 MEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKD 558
           MEK+G  P     N ++   L+  + +K    L K+ + +R L+   TT S+++ L ++ 
Sbjct: 782 MEKSGIVPGSRLLNRIIRMLLEKGEIAKAGNYLSKV-DGKRILLEASTT-SLMLSLFSRK 839

Query: 559 EKYHE 563
            KYHE
Sbjct: 840 GKYHE 844



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 160/610 (26%), Positives = 276/610 (45%), Gaps = 107/610 (17%)

Query: 47  ENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVIS---------- 96
           E  ++G ++ ++A + F  +       P  S N    A+A+     A I+          
Sbjct: 81  ERVRAGTLSRDDAHHMFDELFRQATPVPGRSLNGFLTALARATSSSACITDGPALALALF 140

Query: 97  --FYRKLVSIGLLP-DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVI 153
               R+     ++P    T +IL++C        C   R      LF  ++  G++   I
Sbjct: 141 NRVCREQAGPRVVPLTVHTYSILMDC-------CCRARRPDLGLVLFGCILRTGLKIHQI 193

Query: 154 TYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAK 213
           T  TL+   C       A+ +    +S   E G +   N+FSYSII+  LC   +  +A 
Sbjct: 194 TASTLLKCLCYANRTEEAVNVLLHRMS---ELGCVP--NVFSYSIILKGLCDNSMSQRAL 248

Query: 214 ELFLEM--KGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMID 271
           +LF  M  +G   +P VV   T+IHGF   G   +   LF EM   G +P+++T+N++ID
Sbjct: 249 DLFQMMAKEGGACSPNVVAYNTVIHGFFKEGETGKACSLFHEMTRQGVKPDVVTYNLIID 308

Query: 272 CLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKG--- 328
            LCK   +++A  +L  M   G  PD  TYN ++ GY  +GR+  A ++F  M S+G   
Sbjct: 309 ALCKARAMDKAELVLRQMTTNGAQPDTVTYNCMIHGYATLGRLKEAAKMFRKMKSRGLIP 368

Query: 329 ------------CKH--------------------TVVSYNILINGY------------- 343
                       CKH                     +VSY  L++GY             
Sbjct: 369 NIVICNSFLASLCKHGRSKEAAEIFDSMTAKGHKPDIVSYCTLLHGYASEGWFADMIGLF 428

Query: 344 -----------CKILN-----------VEEAMSLYRQIISNGVRQTVITYNTLLSGLFQA 381
                      C++ N           V++AM ++ ++   GV   V+TY+T++S   + 
Sbjct: 429 NSMKSNGIAADCRVFNILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRM 488

Query: 382 GQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLF-HMLEMNKFEFGIEI 440
           G+   A + F++M    ++P+ + Y+ +I G C +  + +A +L   M+        I  
Sbjct: 489 GRLTDAMEKFNQMVARGIQPNTAVYHSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVF 548

Query: 441 FNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYME 500
           FN +I+ LCK GR+ +A ++F  +   G  P V+T++ +I G C  GK++KA   L  ME
Sbjct: 549 FNSVINSLCKDGRVMDAHDIFDLVTDIGERPDVITFTSLIDGYCLVGKMDKAFKILDAME 608

Query: 501 KNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLL----- 555
             G   ++VT++TL+ G+ +N + +  + L  +M    + + P+  T+ I++  L     
Sbjct: 609 VVGVETDIVTYSTLLDGYFKNGRINDGLTLFREMQ--RKGVKPNTVTYGIMLAGLFRAGR 666

Query: 556 --AKDEKYHE 563
             A  +K+HE
Sbjct: 667 TVAARKKFHE 676


>gi|242069877|ref|XP_002450215.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
 gi|241936058|gb|EES09203.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
          Length = 862

 Score =  288 bits (738), Expect = 5e-75,   Method: Compositional matrix adjust.
 Identities = 173/544 (31%), Positives = 277/544 (50%), Gaps = 48/544 (8%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CK+  ++   A     +M      P I ++N L         +  V+    ++ + GL P
Sbjct: 315 CKAQAVD--RADGVLQHMIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDP 372

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           D +T ++L++        LC   +  EA  +F  MI  G++P+V  YG L++G+   G +
Sbjct: 373 DVVTYSLLLDY-------LCKNGKCTEARKIFYCMIRKGIKPNVTIYGILLHGYAARGAI 425

Query: 169 SVALRLHKKMVSGDYENGLISKTNIF---------------------------------S 195
           +    L   MV+    NG+     IF                                 +
Sbjct: 426 ADLTDLLDLMVA----NGISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVT 481

Query: 196 YSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEML 255
           Y I+ID+LCK G VD A   F +M   G+ P  VV  +L++G C    WE+   LF EM 
Sbjct: 482 YGILIDALCKLGRVDDAVLKFNQMINDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMW 541

Query: 256 DLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRID 315
           D G RPN++ FN ++  LC  G++  A  L++ M + G+ P+  +YN+L+ G+CL GR D
Sbjct: 542 DQGVRPNVVFFNTIMCNLCNEGQVMVAQRLIDSMERVGVRPNVISYNTLIGGHCLAGRTD 601

Query: 316 TAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLL 375
            A ++   M S G K  ++SY+ L+ GYCK   ++ A  L+R+++  GV    +TY+T+L
Sbjct: 602 EAAQLLDVMVSVGLKPDLISYDTLLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYSTIL 661

Query: 376 SGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFE 435
            GLF   +   A++L+  M     + D+ TYNI+++GLCK NCV EA K+F  L      
Sbjct: 662 QGLFHTRRFSEAKELYLNMIKSGQQWDIYTYNIILNGLCKTNCVDEAFKIFQSLCSKDLR 721

Query: 436 FGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDF 495
             I  F  +ID L K GR  +A +LF  +P  GLVP VVTY IM+  + ++G L++ ++ 
Sbjct: 722 PNIITFTIMIDVLFKGGRKKDAMDLFASIPSHGLVPNVVTYCIMMKNIIQEGLLDEFDNL 781

Query: 496 LLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLL 555
            L MEK+GC P+ V  N ++   L   +  +    L K+   E N   + +T S+++ L 
Sbjct: 782 FLAMEKSGCTPDSVMLNAIIRSLLGRGEIMRAGAYLSKI--DEMNFSLEASTTSLLISLF 839

Query: 556 AKDE 559
           +++E
Sbjct: 840 SREE 843



 Score =  250 bits (638), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 157/544 (28%), Positives = 263/544 (48%), Gaps = 40/544 (7%)

Query: 29  RQIAAVSSPETQLNEFLHENCKSGIINLNEA-RYFFGYMTHMQPSPPISSFNLLFGAVAK 87
           R+ +A      +L   + +  +SG + +++A + F   + H +P+  + +FN L   VA+
Sbjct: 3   RRASAARDRCLELERVIADRARSGSLGIDDALKLFDELLPHARPAS-VRAFNHLLNVVAR 61

Query: 88  NR---HYDAVISFYRKLV---SIGLLPDFLTLNILINCFGNKER---------------- 125
            R     +  +S + ++    S  + PD  T +IL  CF    R                
Sbjct: 62  ARCSSTSELAVSLFNRMARACSNKVRPDLCTYSILTGCFCRLGRIEHGFAAFGLILKTGW 121

Query: 126 ------------GLCVENRIKEA-TWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVAL 172
                       GLC   R+ EA   L + M  FG  P+V++  TL+ G C    +  AL
Sbjct: 122 RVNEVVINQLLNGLCDAKRVDEAMDILLRRMPEFGCMPNVVSCNTLLKGLCNEKRVEEAL 181

Query: 173 RLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCT 232
            L   M     + G     N+ +Y+ IID LCK   VD+A+ +   M  +G+   VV  +
Sbjct: 182 ELLHTMAE---DGGGNCTPNVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKLDVVTYS 238

Query: 233 TLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQR 292
           T+I G C A   +   G+   M+D G +P+++T+N +ID LCK   ++ A G+L+ MI +
Sbjct: 239 TIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRAEGVLQHMIDK 298

Query: 293 GLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEA 352
           G+ PD  TYN+++DG C    +D A  +   M  K  K  + +YN LI+GY      +E 
Sbjct: 299 GVKPDVVTYNTIIDGLCKAQAVDRADGVLQHMIDKDVKPDIQTYNCLIHGYLSTGEWKEV 358

Query: 353 MSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDG 412
           +    ++ + G+   V+TY+ LL  L + G+   A+K+F  M    ++P+++ Y IL+ G
Sbjct: 359 VRRLEEMYARGLDPDVVTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKPNVTIYGILLHG 418

Query: 413 LCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPT 472
                 + +   L  ++  N       IFN ++    K   +D A  +F ++ Q GL P 
Sbjct: 419 YAARGAIADLTDLLDLMVANGISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPD 478

Query: 473 VVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLH 532
           VVTY I+I  LC+ G+++ A      M  +G  PN V FN+L++G    ++  K  EL  
Sbjct: 479 VVTYGILIDALCKLGRVDDAVLKFNQMINDGVTPNSVVFNSLVYGLCTVDRWEKAEELFF 538

Query: 533 KMAE 536
           +M +
Sbjct: 539 EMWD 542



 Score =  242 bits (617), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 151/556 (27%), Positives = 266/556 (47%), Gaps = 85/556 (15%)

Query: 72  SPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVEN 131
           +P + ++N +   + K +  D      + ++  G+  D +T + +I+       GLC   
Sbjct: 196 TPNVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKLDVVTYSTIID-------GLCKAQ 248

Query: 132 RIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKT 191
            +  A  + ++MI  GV+PDV+TY T+I+G C+   +  A  + + M+    + G+  K 
Sbjct: 249 AVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRAEGVLQHMI----DKGV--KP 302

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
           ++ +Y+ IID LCK   VD+A  +   M  + + P +     LIHG+   G W+EV    
Sbjct: 303 DVVTYNTIIDGLCKAQAVDRADGVLQHMIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRL 362

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEA----------------------------- 282
            EM   G  P+++T+++++D LCK GK  EA                             
Sbjct: 363 EEMYARGLDPDVVTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKPNVTIYGILLHGYAAR 422

Query: 283 ------NGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSY 336
                   LL+LM+  G++P+ + +N ++  Y     ID A  IF  M   G    VV+Y
Sbjct: 423 GAIADLTDLLDLMVANGISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTY 482

Query: 337 NILINGYCKILNVEEAMSLYRQIISN---------------------------------- 362
            ILI+  CK+  V++A+  + Q+I++                                  
Sbjct: 483 GILIDALCKLGRVDDAVLKFNQMINDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWD 542

Query: 363 -GVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQE 421
            GVR  V+ +NT++  L   GQ   AQ+L D M+   V P++ +YN LI G C      E
Sbjct: 543 QGVRPNVVFFNTIMCNLCNEGQVMVAQRLIDSMERVGVRPNVISYNTLIGGHCLAGRTDE 602

Query: 422 AVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIH 481
           A +L  ++     +  +  ++ L+ G CK GR+DNA+ LF ++ +KG+ P  VTYS ++ 
Sbjct: 603 AAQLLDVMVSVGLKPDLISYDTLLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYSTILQ 662

Query: 482 GLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNL 541
           GL    +  +A +  L M K+G   ++ T+N +++G  + N   +  ++   +    ++L
Sbjct: 663 GLFHTRRFSEAKELYLNMIKSGQQWDIYTYNIILNGLCKTNCVDEAFKIFQSLC--SKDL 720

Query: 542 VPDDTTFSIVVDLLAK 557
            P+  TF+I++D+L K
Sbjct: 721 RPNIITFTIMIDVLFK 736



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 103/312 (33%), Positives = 164/312 (52%), Gaps = 6/312 (1%)

Query: 260 RPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTARE 319
           RP+L T++++  C C+ G+I        L+++ G   +    N L++G C   R+D A +
Sbjct: 87  RPDLCTYSILTGCFCRLGRIEHGFAAFGLILKTGWRVNEVVINQLLNGLCDAKRVDEAMD 146

Query: 320 IFL-SMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNG---VRQTVITYNTLL 375
           I L  M   GC   VVS N L+ G C    VEEA+ L   +  +G       V+TYNT++
Sbjct: 147 ILLRRMPEFGCMPNVVSCNTLLKGLCNEKRVEEALELLHTMAEDGGGNCTPNVVTYNTII 206

Query: 376 SGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFE 435
            GL +A     A+ +   M    V+ D+ TY+ +IDGLCK   V  A  +   +     +
Sbjct: 207 DGLCKAQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMIDKGVK 266

Query: 436 FGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDF 495
             +  +N +IDGLCKA  +D A  +   +  KG+ P VVTY+ +I GLC+   +++A+  
Sbjct: 267 PDVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRADGV 326

Query: 496 LLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLL 555
           L +M      P++ T+N L+HG+L   +  +VV  L +M    R L PD  T+S+++D L
Sbjct: 327 LQHMIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMY--ARGLDPDVVTYSLLLDYL 384

Query: 556 AKDEKYHECSAV 567
            K+ K  E   +
Sbjct: 385 CKNGKCTEARKI 396



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 110/389 (28%), Positives = 175/389 (44%), Gaps = 45/389 (11%)

Query: 224 INPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEAN 283
           + P +   + L   FC  G  E     F  +L  G R N +  N +++ LC   +++EA 
Sbjct: 86  VRPDLCTYSILTGCFCRLGRIEHGFAAFGLILKTGWRVNEVVINQLLNGLCDAKRVDEAM 145

Query: 284 GLL-------------------------ELMIQRGL--------------NPDRFTYNSL 304
            +L                         E  ++  L               P+  TYN++
Sbjct: 146 DILLRRMPEFGCMPNVVSCNTLLKGLCNEKRVEEALELLHTMAEDGGGNCTPNVVTYNTI 205

Query: 305 MDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGV 364
           +DG C    +D A  +   M  KG K  VV+Y+ +I+G CK   V+ A  + + +I  GV
Sbjct: 206 IDGLCKAQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMIDKGV 265

Query: 365 RQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVK 424
           +  V+TYNT++ GL +A     A+ +   M    V+PD+ TYN +IDGLCK   V  A  
Sbjct: 266 KPDVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRADG 325

Query: 425 LFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLC 484
           +   +     +  I+ +NCLI G    G          ++  +GL P VVTYS+++  LC
Sbjct: 326 VLQHMIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYLC 385

Query: 485 RKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPD 544
           + GK  +A      M + G  PNV  +  L+HG+      + + +LL  M      + P+
Sbjct: 386 KNGKCTEARKIFYCMIRKGIKPNVTIYGILLHGYAARGAIADLTDLLDLMV--ANGISPN 443

Query: 545 DTTFSIVVDLLAK----DEKYHECSAVSK 569
           +  F+IV+   AK    DE  H  S +S+
Sbjct: 444 NYIFNIVLCAYAKKAMIDEAMHIFSRMSQ 472



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 57/217 (26%), Positives = 105/217 (48%), Gaps = 10/217 (4%)

Query: 361 SNGVRQTVITYNTLLSGLFQAGQAGY--AQKLFDEMKLYNVEPDLSTYNILIDGLCKNNC 418
           ++  R   +    +++   ++G  G   A KLFDE+  +     +  +N L++ + +  C
Sbjct: 5   ASAARDRCLELERVIADRARSGSLGIDDALKLFDELLPHARPASVRAFNHLLNVVARARC 64

Query: 419 VQE---AVKLFHMLEM---NKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPT 472
                 AV LF+ +     NK    +  ++ L    C+ GR+++ +  F  + + G    
Sbjct: 65  SSTSELAVSLFNRMARACSNKVRPDLCTYSILTGCFCRLGRIEHGFAAFGLILKTGWRVN 124

Query: 473 VVTYSIMIHGLCRKGKLEKANDFLL-YMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELL 531
            V  + +++GLC   ++++A D LL  M + GC PNVV+ NTL+ G     +  + +ELL
Sbjct: 125 EVVINQLLNGLCDAKRVDEAMDILLRRMPEFGCMPNVVSCNTLLKGLCNEKRVEEALELL 184

Query: 532 HKMAEP-ERNLVPDDTTFSIVVDLLAKDEKYHECSAV 567
           H MAE    N  P+  T++ ++D L K +       V
Sbjct: 185 HTMAEDGGGNCTPNVVTYNTIIDGLCKAQAVDRAEGV 221


>gi|222613072|gb|EEE51204.1| hypothetical protein OsJ_32019 [Oryza sativa Japonica Group]
          Length = 615

 Score =  288 bits (737), Expect = 6e-75,   Method: Compositional matrix adjust.
 Identities = 160/480 (33%), Positives = 260/480 (54%), Gaps = 24/480 (5%)

Query: 80  LLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWL 139
           LL G  A  R  DA+    R++  +G +PD  + N L+       +GLC ENR +EA  L
Sbjct: 133 LLKGLCADKRTSDAMDIVLRRMTELGCIPDVFSYNNLL-------KGLCDENRSQEALEL 185

Query: 140 FKNMI---AFGVRPDVITYGTLINGFCRTG--------NLSVALRLHKKMVSGDYENGLI 188
              M      G  PDV++Y T++NGF + G         +  A+ +   MV    +NG++
Sbjct: 186 LHMMADDRGGGSPPDVVSYNTVLNGFFKEGIQTKLTAQAMDKAMEVLNTMV----KNGVM 241

Query: 189 SKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVN 248
              +  +Y+ I+   C  G   +A     +M+  G+ P VV  ++L++  C  G   E  
Sbjct: 242 P--DCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEAR 299

Query: 249 GLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGY 308
            +F  M   G  P++ T+  ++   CK G++ E+  L +LM++ G+ PD  TYN+L+DG 
Sbjct: 300 KIFDSMTKRGLEPDIATYRTLLQGHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGC 359

Query: 309 CLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTV 368
           CL G++D A ++  SM S G K  +V+Y  LINGYC++  +++A++L+++++S+GV   +
Sbjct: 360 CLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNI 419

Query: 369 ITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHM 428
           ITYN +L GLF   +   A++L+  +     + +LSTYNI++ GLCKNN   EA+++F  
Sbjct: 420 ITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQN 479

Query: 429 LEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGK 488
           L +   +     FN +I  L K GR+D A +LF      GLVP V TYS+M   L  +G 
Sbjct: 480 LCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGS 539

Query: 489 LEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTF 548
           LE+ +D  L ME+NGC+ +    N+++   LQ    ++    L  + E   +L     +F
Sbjct: 540 LEELDDLFLSMEENGCSADSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLEASTASF 599



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 92/339 (27%), Positives = 161/339 (47%), Gaps = 49/339 (14%)

Query: 261 PNLLTFNVMIDCLCKGGKI------------------------------------NEANG 284
           P + T+ ++I C C+ G++                                    +  + 
Sbjct: 90  PTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDI 149

Query: 285 LLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSM---HSKGCKHTVVSYNILIN 341
           +L  M + G  PD F+YN+L+ G C   R   A E+   M      G    VVSYN ++N
Sbjct: 150 VLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLN 209

Query: 342 GYCK--------ILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDE 393
           G+ K           +++AM +   ++ NGV    +TYN++L G   +GQ   A     +
Sbjct: 210 GFFKEGIQTKLTAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKK 269

Query: 394 MKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGR 453
           M+   VEP++ TY+ L++ LCKN    EA K+F  +     E  I  +  L+ G CK GR
Sbjct: 270 MRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGHCKEGR 329

Query: 454 LDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNT 513
           +  + +LF  + + G+ P ++TY+ +I G C  GK+++A   L  M   G  P++VT+ T
Sbjct: 330 VIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGT 389

Query: 514 LMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVV 552
           L++G+ + ++    + L  +M      + P+  T++I++
Sbjct: 390 LINGYCRVSRMDDALALFKEMVSS--GVSPNIITYNIIL 426



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 102/405 (25%), Positives = 177/405 (43%), Gaps = 15/405 (3%)

Query: 34  VSSPETQLNEFLHENCKSGIIN--LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHY 91
           V S  T LN F  E  ++ +    +++A      M      P   ++N +      +   
Sbjct: 201 VVSYNTVLNGFFKEGIQTKLTAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQP 260

Query: 92  DAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPD 151
              I   +K+ S G+ P+ +T + L+N        LC   R  EA  +F +M   G+ PD
Sbjct: 261 KEAIGTLKKMRSDGVEPNVVTYSSLMNY-------LCKNGRSTEARKIFDSMTKRGLEPD 313

Query: 152 VITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDK 211
           + TY TL+ G C+ G +  + +L   MV       +  K +I +Y+ +ID  C  G +D+
Sbjct: 314 IATYRTLLQGHCKEGRVIESEKLFDLMVR------IGVKPDIITYNTLIDGCCLAGKMDE 367

Query: 212 AKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMID 271
           A +L   M   G+ P +V   TLI+G+C     ++   LF EM+  G  PN++T+N+++ 
Sbjct: 368 ATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQ 427

Query: 272 CLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKH 331
            L    +   A  L   + + G   +  TYN ++ G C     D A  +F ++     + 
Sbjct: 428 GLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQL 487

Query: 332 TVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLF 391
              ++NI+I    K   ++EA  L+    +NG+   V TY+ +   L + G       LF
Sbjct: 488 ETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLF 547

Query: 392 DEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEF 436
             M+      D    N ++  L +   +  A     M++   F  
Sbjct: 548 LSMEENGCSADSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSL 592



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 70/307 (22%), Positives = 132/307 (42%), Gaps = 49/307 (15%)

Query: 294 LNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAM 353
           + P   TY  L+   C  GR+D       ++  KG +   +++  L+ G C      +AM
Sbjct: 88  VTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAM 147

Query: 354 SLYRQIISN---------------------------------------GVRQTVITYNTL 374
            +  + ++                                        G    V++YNT+
Sbjct: 148 DIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTV 207

Query: 375 LSGLFQAGQAG--YAQKLFDEMKLYN------VEPDLSTYNILIDGLCKNNCVQEAVKLF 426
           L+G F+ G      AQ +   M++ N      V PD  TYN ++ G C +   +EA+   
Sbjct: 208 LNGFFKEGIQTKLTAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTL 267

Query: 427 HMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRK 486
             +  +  E  +  ++ L++ LCK GR   A ++F  + ++GL P + TY  ++ G C++
Sbjct: 268 KKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGHCKE 327

Query: 487 GKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDT 546
           G++ ++      M + G  P+++T+NTL+ G     K  +  +LL  M      + PD  
Sbjct: 328 GRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSV--GVKPDIV 385

Query: 547 TFSIVVD 553
           T+  +++
Sbjct: 386 TYGTLIN 392



 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 71/297 (23%), Positives = 126/297 (42%), Gaps = 38/297 (12%)

Query: 44  FLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVS 103
            L  +CK G   + E+   F  M  +   P I ++N L          D        +VS
Sbjct: 320 LLQGHCKEG--RVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVS 377

Query: 104 IGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFC 163
           +G+ PD +T   LIN       G C  +R+ +A  LFK M++ GV P++ITY  ++ G  
Sbjct: 378 VGVKPDIVTYGTLIN-------GYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLF 430

Query: 164 RTGNLSVALRLHKKMVSGDYENGL---------ISKTNIF-------------------- 194
            T   + A  L+  +     +  L         + K N+                     
Sbjct: 431 HTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETR 490

Query: 195 SYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEM 254
           +++I+I +L K G +D+AK+LF      G+ P V   + +       G+ EE++ LF+ M
Sbjct: 491 TFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSM 550

Query: 255 LDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
            + G   +    N ++  L + G I  A   L ++ ++  + +  T + L++   +V
Sbjct: 551 EENGCSADSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLEASTASFLLESSPIV 607



 Score = 46.6 bits (109), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 33/128 (25%), Positives = 54/128 (42%), Gaps = 39/128 (30%)

Query: 457 AWELFHKLPQKG---LVPTVVTYSIMIHGLCRKGKLE----------------------- 490
           A   ++++ + G   + PTV TY+I+I   CR G+L+                       
Sbjct: 73  AVSRYNRMARAGAGKVTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTP 132

Query: 491 ------------KANDFLL-YMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEP 537
                        A D +L  M + GC P+V ++N L+ G    N++ + +ELLH MA+ 
Sbjct: 133 LLKGLCADKRTSDAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADD 192

Query: 538 ERNLVPDD 545
                P D
Sbjct: 193 RGGGSPPD 200


>gi|302806665|ref|XP_002985064.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
 gi|300147274|gb|EFJ13939.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
          Length = 1636

 Score =  288 bits (737), Expect = 6e-75,   Method: Compositional matrix adjust.
 Identities = 171/514 (33%), Positives = 274/514 (53%), Gaps = 17/514 (3%)

Query: 65   YMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKE 124
            Y   +  SP + +F +L   + +           +++   G+  + +  N++I       
Sbjct: 867  YRNKLCCSPNMFTFTILIHGLCRAGDIGTAYELLKEMPRHGVPQNVILHNVVI------- 919

Query: 125  RGLCVENRIKEATWLFKNMIAFG-VRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDY 183
            +GLC   ++  A  LFK M   G   PDV TY T+++   ++G +  A RL + MVS   
Sbjct: 920  KGLCSARKLDSALELFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEDMVSKG- 978

Query: 184  ENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGN 243
                    N+ +YS ++  LCK G +D+A  L   M   G +P +V   T+I G C  G 
Sbjct: 979  -----CSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGR 1033

Query: 244  WEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNS 303
             +E   L  EM+D G +PN++T+ V++D  CK GK  +A GL+E+M+++G  P+ FTYNS
Sbjct: 1034 IDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNS 1093

Query: 304  LMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNG 363
            L+D +C    ++ A ++  SM  KGC   VVSYN +I G CK   V E + L  Q++SN 
Sbjct: 1094 LLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNN 1153

Query: 364  VRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAV 423
                ++T+NT++  + +  +   A +LF+ ++     P+L TYN L+ GLCK+    +A 
Sbjct: 1154 CVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAE 1213

Query: 424  KLFH-MLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHG 482
             L   M         I  +N +IDGLCK+ R+D A++LF ++   GL P  VTYSI+I  
Sbjct: 1214 YLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISS 1273

Query: 483  LCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLV 542
            LC+   +++AN+ L  M KNG  P  +T+ TL+ GF +     K +E+L  +    +   
Sbjct: 1274 LCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLS--KGSY 1331

Query: 543  PDDTTFSIVVDLLAKDEKYHECSAVSKSSYRACL 576
            PD  TFSI +D L+K  +  +   + ++  RA L
Sbjct: 1332 PDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGL 1365



 Score =  286 bits (732), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 156/509 (30%), Positives = 269/509 (52%), Gaps = 18/509 (3%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           C +G    ++A   F  M+   P P   ++N +   ++K+   D  I    ++V  G  P
Sbjct: 207 CDAG--QCSDAVLHFREMSKTCP-PDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAP 263

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           +  + N +++       G C  NR++ A WL + M+  G  PDV++Y T+ING C+   +
Sbjct: 264 NVFSYNTVLH-------GFCKANRVENALWLLEQMVTRGCPPDVVSYTTVINGLCKLDQV 316

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
             A R+  KM+    + G   + N+ +Y  ++D  C+ G +D A EL  +M  RG  P  
Sbjct: 317 DEACRVMDKMI----QRG--CQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNA 370

Query: 229 VVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLEL 288
           +    ++H FC   + E  + +   M+  G  P+ + ++ +I   CK GK+ EA+ LLE 
Sbjct: 371 ITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCKAGKLREAHDLLEQ 430

Query: 289 MIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILN 348
           MI+RG  PD    ++L+D  C    ID+A+E+        C   VV+Y+ILI+  CK   
Sbjct: 431 MIRRGCRPDVACLSTLIDALCKAAAIDSAQELLRMSIGMDCAPDVVAYSILIHALCKAKR 490

Query: 349 VEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNI 408
           + EA S    ++ N     V+TYN+++ GL ++ +   A  LFD M+   V PD+ TY+I
Sbjct: 491 LPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRINDAFLLFDRMRAAGVMPDVVTYSI 550

Query: 409 LIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKG 468
           +I   CK+N +  A K+   ++  K    +  ++ LI+GLCKAG +D A+++F ++   G
Sbjct: 551 VIHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYSALINGLCKAGTVDKAFDVFQEMLGCG 610

Query: 469 LVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVV 528
             P +VTY+ +I GLC+  K+E+A + L  M K  C P+ +T+  L++G    ++  +  
Sbjct: 611 CAPNLVTYNTLIDGLCKINKVEQAAEMLEIMRKQSCTPDSITYTCLINGLCNASRLEEAW 670

Query: 529 ELLHKMAEPERNLVPDDTTFSIVVDLLAK 557
            +L +M   ++  +PD  T+  ++  L K
Sbjct: 671 RVLREM--KDKGCLPDRMTYGTLLRALQK 697



 Score =  246 bits (629), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 145/474 (30%), Positives = 232/474 (48%), Gaps = 36/474 (7%)

Query: 56  LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNI 115
           L++A      M     +P + S+N +     K    +  +    ++V+ G  PD ++   
Sbjct: 246 LDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVTRGCPPDVVSYTT 305

Query: 116 LINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLH 175
           +IN       GLC  +++ EA  +   MI  G +P+VITYGTL++GFCR G+L  A+ L 
Sbjct: 306 VIN-------GLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELV 358

Query: 176 KKMVSGDYENGLISKTNIF-----------------------------SYSIIIDSLCKE 206
           +KM    Y    I+  NI                              +YS II   CK 
Sbjct: 359 RKMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCKA 418

Query: 207 GLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTF 266
           G + +A +L  +M  RG  P V   +TLI   C A   +    L    + +   P+++ +
Sbjct: 419 GKLREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQELLRMSIGMDCAPDVVAY 478

Query: 267 NVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHS 326
           +++I  LCK  ++ EA   L++M++    PD  TYNS++DG C   RI+ A  +F  M +
Sbjct: 479 SILIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRINDAFLLFDRMRA 538

Query: 327 KGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGY 386
            G    VV+Y+I+I+ +CK  N++ A  +  ++        V+TY+ L++GL +AG    
Sbjct: 539 AGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYSALINGLCKAGTVDK 598

Query: 387 AQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLID 446
           A  +F EM      P+L TYN LIDGLCK N V++A ++  ++           + CLI+
Sbjct: 599 AFDVFQEMLGCGCAPNLVTYNTLIDGLCKINKVEQAAEMLEIMRKQSCTPDSITYTCLIN 658

Query: 447 GLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYME 500
           GLC A RL+ AW +  ++  KG +P  +TY  ++  L +   LE     L  ME
Sbjct: 659 GLCNASRLEEAWRVLREMKDKGCLPDRMTYGTLLRALQKTNNLELVEQLLKEME 712



 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 149/531 (28%), Positives = 250/531 (47%), Gaps = 100/531 (18%)

Query: 131 NRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRL---------------H 175
           ++  +A  LF++ I      D +TY TLI+GF R G +  A  L               H
Sbjct: 140 HQYSQAHDLFRSRIEGQWGGDTVTYSTLISGFIRAGKILPAYELFDEMNRKGLKAHAGVH 199

Query: 176 KKMVSGDYENGL----------ISKT---NIFSYSIIIDSLCKEGLVDKAKELFLEMKGR 222
           K ++ G  + G           +SKT   +  +Y+ +I+ L K   +D A  L  EM   
Sbjct: 200 KSILRGLCDAGQCSDAVLHFREMSKTCPPDSVTYNTMINGLSKSDRLDDAIRLLEEMVDN 259

Query: 223 GINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEA 282
           G  P V    T++HGFC A   E    L  +M+  G  P+++++  +I+ LCK  +++EA
Sbjct: 260 GFAPNVFSYNTVLHGFCKANRVENALWLLEQMVTRGCPPDVVSYTTVINGLCKLDQVDEA 319

Query: 283 NGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILING 342
             +++ MIQRG  P+  TY +L+DG+C VG +D A E+   M  +G +   ++YN +++ 
Sbjct: 320 CRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHV 379

Query: 343 YCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPD 402
           +C+  ++E A  + + +I  G     I Y+T++SG  +AG+   A  L ++M      PD
Sbjct: 380 FCRRNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCKAGKLREAHDLLEQMIRRGCRPD 439

Query: 403 LSTYNILIDGLCKNNCVQEAVKLFHM---------------------------------- 428
           ++  + LID LCK   +  A +L  M                                  
Sbjct: 440 VACLSTLIDALCKAAAIDSAQELLRMSIGMDCAPDVVAYSILIHALCKAKRLPEAESWLD 499

Query: 429 -LEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIH------ 481
            +  N+    +  +N ++DGLCK+ R+++A+ LF ++   G++P VVTYSI+IH      
Sbjct: 500 VMVKNRCYPDVVTYNSVVDGLCKSRRINDAFLLFDRMRAAGVMPDVVTYSIVIHSFCKDN 559

Query: 482 -----------------------------GLCRKGKLEKANDFLLYMEKNGCAPNVVTFN 512
                                        GLC+ G ++KA D    M   GCAPN+VT+N
Sbjct: 560 NLDSAFKMLERMKEAKCVPDVVTYSALINGLCKAGTVDKAFDVFQEMLGCGCAPNLVTYN 619

Query: 513 TLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
           TL+ G  + NK  +  E+L  M   +++  PD  T++ +++ L    +  E
Sbjct: 620 TLIDGLCKINKVEQAAEMLEIMR--KQSCTPDSITYTCLINGLCNASRLEE 668



 Score =  204 bits (520), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 131/447 (29%), Positives = 210/447 (46%), Gaps = 44/447 (9%)

Query: 147 GVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKE 206
           G + ++     L+N   +    S A  L +  + G +    ++      YS +I    + 
Sbjct: 121 GYQHEIFCCNCLLNVLVKAHQYSQAHDLFRSRIEGQWGGDTVT------YSTLISGFIRA 174

Query: 207 GLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTF 266
           G +  A ELF EM  +G+     V  +++ G C AG   +    F EM    P P+ +T+
Sbjct: 175 GKILPAYELFDEMNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREMSKTCP-PDSVTY 233

Query: 267 NVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHS 326
           N MI+ L K  ++++A  LLE M+  G  P+ F+YN+++ G+C   R++ A  +   M +
Sbjct: 234 NTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVT 293

Query: 327 KGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAG---- 382
           +GC   VVSY  +ING CK+  V+EA  +  ++I  G +  VITY TL+ G  + G    
Sbjct: 294 RGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDG 353

Query: 383 ---------QAGY----------------------AQKLFDEMKLYNVEPDLSTYNILID 411
                    + GY                      A ++   M      PD   Y+ +I 
Sbjct: 354 AVELVRKMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTIIS 413

Query: 412 GLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVP 471
           G CK   ++EA  L   +        +   + LID LCKA  +D+A EL          P
Sbjct: 414 GFCKAGKLREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQELLRMSIGMDCAP 473

Query: 472 TVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELL 531
            VV YSI+IH LC+  +L +A  +L  M KN C P+VVT+N+++ G  ++ + +    L 
Sbjct: 474 DVVAYSILIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRINDAFLLF 533

Query: 532 HKMAEPERNLVPDDTTFSIVVDLLAKD 558
            +M      ++PD  T+SIV+    KD
Sbjct: 534 DRMRAA--GVMPDVVTYSIVIHSFCKD 558



 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 155/567 (27%), Positives = 256/567 (45%), Gaps = 69/567 (12%)

Query: 42   NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
            N  +  +CK G I+  EA +    M      P + ++ +L  A  K    +  I     +
Sbjct: 1022 NTIIDGHCKLGRID--EAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVM 1079

Query: 102  VSIGLLPDFLTLNILINCFGNKER----------------------------GLCVENRI 133
            V  G +P+  T N L++ F  K+                             GLC   ++
Sbjct: 1080 VEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKV 1139

Query: 134  KEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNI 193
             E   L + M++    PD++T+ T+I+  C+T  + +A  L   +     E+G     N+
Sbjct: 1140 HEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLI----QESGCTP--NL 1193

Query: 194  FSYSIIIDSLCKEGLVDKAKELFLEM-KGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
             +Y+ ++  LCK    D+A+ L  EM + +G +P ++   T+I G C +   +    LF+
Sbjct: 1194 VTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFL 1253

Query: 253  EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
            +ML  G  P+ +T++++I  LCK   ++EAN +LELM++ G +P   TY +L+DG+C  G
Sbjct: 1254 QMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTG 1313

Query: 313  RIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYN 372
             +D A EI   + SKG    VV+++I I+   K   + +A  L   ++  G+    +TYN
Sbjct: 1314 NLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYN 1373

Query: 373  TLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGL------------CKNNCVQ 420
            TLL G   A     A  LF+ M+    EPD +TY  L+  L               + V 
Sbjct: 1374 TLLKGFCDASLTEDAVDLFEVMRQCGCEPDNATYTTLVGHLVDKKSYKDLLAEVSKSMVD 1433

Query: 421  EAVKLFHMLEMNKFEFGIEI-----FNC-LIDGLCKAGRLDNAWELFHKLPQKGLVPTVV 474
               KL H L  +K E  IE+       C ++D   K G   +A ++F  + Q+     VV
Sbjct: 1434 TGFKLNHELS-SKLEASIEVEADVRLGCAIVDMFGKCGSPQDARKVFEGMDQR----NVV 1488

Query: 475  TYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLM----HGFLQNNKTSKVVEL 530
             +S M+       + E+A      M   G  P+ VTF +L+    H  L +    + V +
Sbjct: 1489 LWSAMLGVYVFHKQEEQAFGLWRVMGLEGVEPDAVTFLSLLTMCCHAGLLDAAVDEFVSI 1548

Query: 531  LHKMAEPERNLVPDDTTFSIVVDLLAK 557
                   +  L P    FS V+DLL +
Sbjct: 1549 -----SRDYGLEPGVDHFSCVIDLLGR 1570



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 128/470 (27%), Positives = 212/470 (45%), Gaps = 66/470 (14%)

Query: 73   PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
            P I +FN +  A+ K    D     +  +   G  P+ +T N L++       GLC   R
Sbjct: 1156 PDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVH-------GLCKSRR 1208

Query: 133  IKEATWLFKNMI-AFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKT 191
              +A +L + M    G  PD+ITY T+I+G C++  +  A +L  +M+S    +GL    
Sbjct: 1209 FDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLS----DGL--AP 1262

Query: 192  NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
            +  +YSI+I SLCK   +D+A  +   M   G +P  +   TLI GFC  GN ++   + 
Sbjct: 1263 DDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEIL 1322

Query: 252  IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
              +L  G  P+++TF++ ID L K G++ +A  LLE M++ GL PD  TYN+L+ G+C  
Sbjct: 1323 QLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDA 1382

Query: 312  GRIDTAREIFLSMHSKGCKHTVVSYNILI------NGYCKIL------------------ 347
               + A ++F  M   GC+    +Y  L+        Y  +L                  
Sbjct: 1383 SLTEDAVDLFEVMRQCGCEPDNATYTTLVGHLVDKKSYKDLLAEVSKSMVDTGFKLNHEL 1442

Query: 348  --------NVEEAMSL----------------YRQIISNGVRQTVITYNTLLSGLFQAGQ 383
                     VE  + L                 R++     ++ V+ ++ +L       Q
Sbjct: 1443 SSKLEASIEVEADVRLGCAIVDMFGKCGSPQDARKVFEGMDQRNVVLWSAMLGVYVFHKQ 1502

Query: 384  AGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMN-KFEFGIEIFN 442
               A  L+  M L  VEPD  T+  L+   C    +  AV  F  +  +   E G++ F+
Sbjct: 1503 EEQAFGLWRVMGLEGVEPDAVTFLSLLTMCCHAGLLDAAVDEFVSISRDYGLEPGVDHFS 1562

Query: 443  CLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKA 492
            C+ID L + G ++ A +L   +P K   P+  T++ ++      G  E+A
Sbjct: 1563 CVIDLLGRLGLVNEAEDLMLGMPCK---PSAATWNCLLSAYKICGDFERA 1609



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 81/265 (30%), Positives = 130/265 (49%), Gaps = 15/265 (5%)

Query: 41  LNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRK 100
           L+  +   CK+  I+   A+        M  +P + ++++L  A+ K +      S+   
Sbjct: 443 LSTLIDALCKAAAID--SAQELLRMSIGMDCAPDVVAYSILIHALCKAKRLPEAESWLDV 500

Query: 101 LVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLIN 160
           +V     PD +T N +++       GLC   RI +A  LF  M A GV PDV+TY  +I+
Sbjct: 501 MVKNRCYPDVVTYNSVVD-------GLCKSRRINDAFLLFDRMRAAGVMPDVVTYSIVIH 553

Query: 161 GFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMK 220
            FC+  NL  A ++ ++M             ++ +YS +I+ LCK G VDKA ++F EM 
Sbjct: 554 SFCKDNNLDSAFKMLERMKEAK------CVPDVVTYSALINGLCKAGTVDKAFDVFQEML 607

Query: 221 GRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKIN 280
           G G  P +V   TLI G C     E+   +   M      P+ +T+  +I+ LC   ++ 
Sbjct: 608 GCGCAPNLVTYNTLIDGLCKINKVEQAAEMLEIMRKQSCTPDSITYTCLINGLCNASRLE 667

Query: 281 EANGLLELMIQRGLNPDRFTYNSLM 305
           EA  +L  M  +G  PDR TY +L+
Sbjct: 668 EAWRVLREMKDKGCLPDRMTYGTLL 692



 Score = 62.8 bits (151), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 71/315 (22%), Positives = 120/315 (38%), Gaps = 55/315 (17%)

Query: 49   CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
            CK+G  NL++A      +      P + +F++    ++K             ++  GL+P
Sbjct: 1310 CKTG--NLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVP 1367

Query: 109  DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
            D +T N L+       +G C  +  ++A  LF+ M   G  PD  TY TL+       + 
Sbjct: 1368 DTVTYNTLL-------KGFCDASLTEDAVDLFEVMRQCGCEPDNATYTTLVGHLVDKKSY 1420

Query: 169  SVAL-RLHKKMV----------SGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFL 217
               L  + K MV          S   E  +  + ++     I+D   K G    A+++F 
Sbjct: 1421 KDLLAEVSKSMVDTGFKLNHELSSKLEASIEVEADVRLGCAIVDMFGKCGSPQDARKVFE 1480

Query: 218  EMKGR-------------------------------GINPAVVVCTTLIHGFCCAGNWEE 246
             M  R                               G+ P  V   +L+   C AG  + 
Sbjct: 1481 GMDQRNVVLWSAMLGVYVFHKQEEQAFGLWRVMGLEGVEPDAVTFLSLLTMCCHAGLLDA 1540

Query: 247  VNGLFIEM-LDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLM 305
                F+ +  D G  P +  F+ +ID L + G +NEA    +LM+     P   T+N L+
Sbjct: 1541 AVDEFVSISRDYGLEPGVDHFSCVIDLLGRLGLVNEAE---DLMLGMPCKPSAATWNCLL 1597

Query: 306  DGYCLVGRIDTAREI 320
              Y + G  + A  +
Sbjct: 1598 SAYKICGDFERALRV 1612


>gi|357130063|ref|XP_003566676.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 822

 Score =  288 bits (736), Expect = 7e-75,   Method: Compositional matrix adjust.
 Identities = 169/527 (32%), Positives = 276/527 (52%), Gaps = 51/527 (9%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
           P   ++N +    +    +      +R++   GL+PD  T N  ++        LC   +
Sbjct: 295 PDKVTYNCMIHGYSILGQWKETAGMFREMTRRGLMPDIFTCNSYMS-------SLCKHGK 347

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
            KEA   F +M A G +PD++TY  L++G+   G +   L L   M      NG+++  +
Sbjct: 348 SKEAAEFFDSMAAKGHKPDLVTYSVLLHGYAAEGYVVDMLNLFNSMEG----NGIVADHS 403

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGI---------------------------- 224
           +  Y+I+ID+  K G++D+A  +F +M+ RG+                            
Sbjct: 404 V--YNILIDAYGKRGMMDEAMLIFTQMQERGVMPDAWTYGTVIAAFSRMGRLADAMDKFN 461

Query: 225 -------NPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLG-PRPNLLTFNVMIDCLCKG 276
                   P  +V  +LI GFC  GN  +   L  EM+  G PRPN + FN +I+ LCK 
Sbjct: 462 QMIAMGLKPDTIVYNSLIQGFCMHGNLVKAKELISEMMSRGIPRPNTVFFNSIINSLCKE 521

Query: 277 GKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSY 336
           G++ EA  + +L+I  G  PD  T+NSL+DGY LVG+++ A  +  +M S G +  VV+Y
Sbjct: 522 GRVVEAQDIFDLVIHIGERPDVITFNSLIDGYGLVGKMEKAFGVLDAMISVGIEPDVVTY 581

Query: 337 NILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKL 396
           + L++GYC+   +++ + L+R+++S GV+ T ITY  +L GLF  G+   A+K+  EM  
Sbjct: 582 SALLDGYCRNGRIDDGLILFREMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIE 641

Query: 397 YNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDN 456
                D+ST  I++ GLC+NNC  EA+ LF  L     +F I I N +ID + K  + + 
Sbjct: 642 SGTTMDISTCGIILGGLCRNNCDDEAIALFKKLGAMNVKFNIAIINTMIDAMYKVRKREE 701

Query: 457 AWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMH 516
           A ELF  +   GLVP   TY +MI  L ++G +E+A++    MEK+GCAP+    N ++ 
Sbjct: 702 ANELFDSISATGLVPNASTYGVMITNLLKEGSVEEADNMFSLMEKSGCAPSSRLLNNIIR 761

Query: 517 GFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
             L+  + SK    L K+    + +  + +T S+++ L ++  KY E
Sbjct: 762 VLLEKGEISKAGNYLSKV--DGKTISLEASTASLMLSLFSRKGKYRE 806



 Score =  221 bits (564), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 151/521 (28%), Positives = 235/521 (45%), Gaps = 42/521 (8%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
           P + ++N+L     +        + + + +  GL  D +  NIL+ C       LC   R
Sbjct: 117 PTVCTYNILMDCCCRAHRPTVGFALFGRFLKTGLKTDVIVANILLKC-------LCHAKR 169

Query: 133 IKEAT-WLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVS----------- 180
             +A   L   M   GV PD I+Y T++   C       AL L   MV            
Sbjct: 170 SDDAVNVLLHRMPELGVEPDTISYSTVLKSLCEDSRSQRALDLLHTMVKKSGGCSPNVVS 229

Query: 181 ------GDYENGLISKT--------------NIFSYSIIIDSLCKEGLVDKAKELFLEMK 220
                 G +  G +SK               ++ +YS  ID+LCK   +DKA+ +  +M 
Sbjct: 230 YNTVIHGFFREGEVSKACNLFHEMMQQGVVPDVVTYSSYIDALCKARAMDKAELVLRQMI 289

Query: 221 GRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKIN 280
             G  P  V    +IHG+   G W+E  G+F EM   G  P++ T N  +  LCK GK  
Sbjct: 290 SNGFEPDKVTYNCMIHGYSILGQWKETAGMFREMTRRGLMPDIFTCNSYMSSLCKHGKSK 349

Query: 281 EANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILI 340
           EA    + M  +G  PD  TY+ L+ GY   G +     +F SM   G       YNILI
Sbjct: 350 EAAEFFDSMAAKGHKPDLVTYSVLLHGYAAEGYVVDMLNLFNSMEGNGIVADHSVYNILI 409

Query: 341 NGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVE 400
           + Y K   ++EAM ++ Q+   GV     TY T+++   + G+   A   F++M    ++
Sbjct: 410 DAYGKRGMMDEAMLIFTQMQERGVMPDAWTYGTVIAAFSRMGRLADAMDKFNQMIAMGLK 469

Query: 401 PDLSTYNILIDGLCKNNCVQEAVKLF-HMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWE 459
           PD   YN LI G C +  + +A +L   M+           FN +I+ LCK GR+  A +
Sbjct: 470 PDTIVYNSLIQGFCMHGNLVKAKELISEMMSRGIPRPNTVFFNSIINSLCKEGRVVEAQD 529

Query: 460 LFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFL 519
           +F  +   G  P V+T++ +I G    GK+EKA   L  M   G  P+VVT++ L+ G+ 
Sbjct: 530 IFDLVIHIGERPDVITFNSLIDGYGLVGKMEKAFGVLDAMISVGIEPDVVTYSALLDGYC 589

Query: 520 QNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEK 560
           +N +    + L  +M    + + P   T+ I++  L  D +
Sbjct: 590 RNGRIDDGLILFREML--SKGVKPTTITYGIILHGLFNDGR 628



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 135/537 (25%), Positives = 252/537 (46%), Gaps = 41/537 (7%)

Query: 66  MTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLV--SIGLLPDFLTLNILINCFGNK 123
           M  +   P   S++ +  ++ ++      +     +V  S G  P+ ++ N +I+     
Sbjct: 181 MPELGVEPDTISYSTVLKSLCEDSRSQRALDLLHTMVKKSGGCSPNVVSYNTVIH----- 235

Query: 124 ERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDY 183
             G   E  + +A  LF  M+  GV PDV+TY + I+  C+   +  A  + ++M+S  +
Sbjct: 236 --GFFREGEVSKACNLFHEMMQQGVVPDVVTYSSYIDALCKARAMDKAELVLRQMISNGF 293

Query: 184 ENGLISKT-----------------------------NIFSYSIIIDSLCKEGLVDKAKE 214
           E   ++                               +IF+ +  + SLCK G   +A E
Sbjct: 294 EPDKVTYNCMIHGYSILGQWKETAGMFREMTRRGLMPDIFTCNSYMSSLCKHGKSKEAAE 353

Query: 215 LFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLC 274
            F  M  +G  P +V  + L+HG+   G   ++  LF  M   G   +   +N++ID   
Sbjct: 354 FFDSMAAKGHKPDLVTYSVLLHGYAAEGYVVDMLNLFNSMEGNGIVADHSVYNILIDAYG 413

Query: 275 KGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVV 334
           K G ++EA  +   M +RG+ PD +TY +++  +  +GR+  A + F  M + G K   +
Sbjct: 414 KRGMMDEAMLIFTQMQERGVMPDAWTYGTVIAAFSRMGRLADAMDKFNQMIAMGLKPDTI 473

Query: 335 SYNILINGYCKILNVEEAMSLYRQIISNGV-RQTVITYNTLLSGLFQAGQAGYAQKLFDE 393
            YN LI G+C   N+ +A  L  +++S G+ R   + +N++++ L + G+   AQ +FD 
Sbjct: 474 VYNSLIQGFCMHGNLVKAKELISEMMSRGIPRPNTVFFNSIINSLCKEGRVVEAQDIFDL 533

Query: 394 MKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGR 453
           +      PD+ T+N LIDG      +++A  +   +     E  +  ++ L+DG C+ GR
Sbjct: 534 VIHIGERPDVITFNSLIDGYGLVGKMEKAFGVLDAMISVGIEPDVVTYSALLDGYCRNGR 593

Query: 454 LDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNT 513
           +D+   LF ++  KG+ PT +TY I++HGL   G+   A      M ++G   ++ T   
Sbjct: 594 IDDGLILFREMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMDISTCGI 653

Query: 514 LMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKS 570
           ++ G  +NN   + + L  K+     N+  +    + ++D + K  K  E + +  S
Sbjct: 654 ILGGLCRNNCDDEAIALFKKLG--AMNVKFNIAIINTMIDAMYKVRKREEANELFDS 708



 Score =  178 bits (451), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 115/422 (27%), Positives = 206/422 (48%), Gaps = 12/422 (2%)

Query: 150 PDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLV 209
           P V TY  L++  CR    +V   L  + +    + GL  KT++   +I++  LC     
Sbjct: 117 PTVCTYNILMDCCCRAHRPTVGFALFGRFL----KTGL--KTDVIVANILLKCLCHAKRS 170

Query: 210 DKAKELFL-EMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDL--GPRPNLLTF 266
           D A  + L  M   G+ P  +  +T++   C     +    L   M+    G  PN++++
Sbjct: 171 DDAVNVLLHRMPELGVEPDTISYSTVLKSLCEDSRSQRALDLLHTMVKKSGGCSPNVVSY 230

Query: 267 NVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHS 326
           N +I    + G++++A  L   M+Q+G+ PD  TY+S +D  C    +D A  +   M S
Sbjct: 231 NTVIHGFFREGEVSKACNLFHEMMQQGVVPDVVTYSSYIDALCKARAMDKAELVLRQMIS 290

Query: 327 KGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGY 386
            G +   V+YN +I+GY  +   +E   ++R++   G+   + T N+ +S L + G++  
Sbjct: 291 NGFEPDKVTYNCMIHGYSILGQWKETAGMFREMTRRGLMPDIFTCNSYMSSLCKHGKSKE 350

Query: 387 AQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLID 446
           A + FD M     +PDL TY++L+ G      V + + LF+ +E N       ++N LID
Sbjct: 351 AAEFFDSMAAKGHKPDLVTYSVLLHGYAAEGYVVDMLNLFNSMEGNGIVADHSVYNILID 410

Query: 447 GLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAP 506
              K G +D A  +F ++ ++G++P   TY  +I    R G+L  A D    M   G  P
Sbjct: 411 AYGKRGMMDEAMLIFTQMQERGVMPDAWTYGTVIAAFSRMGRLADAMDKFNQMIAMGLKP 470

Query: 507 NVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLV-PDDTTFSIVVDLLAKDEKYHECS 565
           + + +N+L+ GF  +    K  EL+ +M    R +  P+   F+ +++ L K+ +  E  
Sbjct: 471 DTIVYNSLIQGFCMHGNLVKAKELISEMM--SRGIPRPNTVFFNSIINSLCKEGRVVEAQ 528

Query: 566 AV 567
            +
Sbjct: 529 DI 530


>gi|115474441|ref|NP_001060817.1| Os08g0110200 [Oryza sativa Japonica Group]
 gi|42408384|dbj|BAD09535.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|113622786|dbj|BAF22731.1| Os08g0110200 [Oryza sativa Japonica Group]
 gi|125601950|gb|EAZ41275.1| hypothetical protein OsJ_25782 [Oryza sativa Japonica Group]
          Length = 798

 Score =  287 bits (735), Expect = 9e-75,   Method: Compositional matrix adjust.
 Identities = 181/532 (34%), Positives = 270/532 (50%), Gaps = 42/532 (7%)

Query: 34  VSSPETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDA 93
           V S  T +N  L E        L++A   F  M     SP   ++N L      +     
Sbjct: 206 VVSYTTVINGLLREG------QLDKAYCLFDEMLDQGMSPNCITYNCLLHGYCSSGKPKE 259

Query: 94  VISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVI 153
            I  +RK+   G+ PD +T N L+         LC   R  EA  +F +M+  G +PD  
Sbjct: 260 AIGIFRKMCRDGVEPDVVTYNTLMVY-------LCKNGRSMEARKVFDSMVKKGHKPDSS 312

Query: 154 TYGTLINGFCRTGNLSVALRLHKKMVS--------------GDY-ENGLISKT------- 191
            YGTL++G+   G L    +L   MV               G Y ++G++ +        
Sbjct: 313 IYGTLLHGYATEGYLVQMHQLLDVMVRNGTQPDHYIFNILIGAYAKHGMVDEAMLAFSKM 372

Query: 192 -------NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNW 244
                  NI +Y  ++D+LC+ G VD A   F  +   G+ P  VV  TLIHG C    W
Sbjct: 373 RQQGLHPNIVTYGTVMDALCRVGKVDDAMSQFDRLISEGLTPNGVVFRTLIHGLCACDKW 432

Query: 245 EEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSL 304
           ++   L +EM+  G  PN + FN +++ LCK G +  A  + +LM++  +  D  TY +L
Sbjct: 433 DKAEELAVEMIGRGICPNTIFFNTLLNHLCKEGMVTRAKNIFDLMVRVDVQCDVITYTTL 492

Query: 305 MDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGV 364
           +DGYCL G++D A ++   M   G K   V+YN +INGYCK   +E+A SL+RQ+ S GV
Sbjct: 493 IDGYCLDGKVDEATKLLEGMVLDGVKPNEVTYNTIINGYCKNGRIEDACSLFRQMASKGV 552

Query: 365 RQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVK 424
              ++ Y+T+L GLFQ  +   A++L+  M    ++  + TYNI++ GLC+NNC  +A++
Sbjct: 553 NPGIVIYSTILHGLFQTRRIAAAKELYLWMIKCGIKLPIGTYNIILQGLCQNNCTDDALR 612

Query: 425 LFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLC 484
           +FH L +  F      FN +ID L K GR D A +LF  L  +GLVP VVTY +M+  L 
Sbjct: 613 MFHNLCLIDFHLQNRTFNIMIDALLKGGRHDEAKDLFASLLARGLVPNVVTYWLMMKSLI 672

Query: 485 RKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAE 536
            +G LE+ +D  L +EKNGC  +    N L+    Q  +  K    L K+ E
Sbjct: 673 EQGLLEELDDLFLSLEKNGCTADSRMLNALVGKLPQKGEVRKAGVYLSKIDE 724



 Score =  241 bits (616), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 155/517 (29%), Positives = 259/517 (50%), Gaps = 42/517 (8%)

Query: 80  LLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWL 139
           LL G     R  DA+    R++ ++G  P+  + NIL+       +GLC ENR ++A  L
Sbjct: 137 LLKGLCHDKRTSDAMDIALRRMPALGCTPNAFSYNILL-------KGLCDENRSQQALHL 189

Query: 140 FKNMIAFGVR----PDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLIS------ 189
              M+A   R    PDV++Y T+ING  R G L  A  L  +M+        I+      
Sbjct: 190 LHTMMADDTRGGCPPDVVSYTTVINGLLREGQLDKAYCLFDEMLDQGMSPNCITYNCLLH 249

Query: 190 -----------------------KTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINP 226
                                  + ++ +Y+ ++  LCK G   +A+++F  M  +G  P
Sbjct: 250 GYCSSGKPKEAIGIFRKMCRDGVEPDVVTYNTLMVYLCKNGRSMEARKVFDSMVKKGHKP 309

Query: 227 AVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLL 286
              +  TL+HG+   G   +++ L   M+  G +P+   FN++I    K G ++EA    
Sbjct: 310 DSSIYGTLLHGYATEGYLVQMHQLLDVMVRNGTQPDHYIFNILIGAYAKHGMVDEAMLAF 369

Query: 287 ELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKI 346
             M Q+GL+P+  TY ++MD  C VG++D A   F  + S+G     V +  LI+G C  
Sbjct: 370 SKMRQQGLHPNIVTYGTVMDALCRVGKVDDAMSQFDRLISEGLTPNGVVFRTLIHGLCAC 429

Query: 347 LNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTY 406
              ++A  L  ++I  G+    I +NTLL+ L + G    A+ +FD M   +V+ D+ TY
Sbjct: 430 DKWDKAEELAVEMIGRGICPNTIFFNTLLNHLCKEGMVTRAKNIFDLMVRVDVQCDVITY 489

Query: 407 NILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQ 466
             LIDG C +  V EA KL   + ++  +     +N +I+G CK GR+++A  LF ++  
Sbjct: 490 TTLIDGYCLDGKVDEATKLLEGMVLDGVKPNEVTYNTIINGYCKNGRIEDACSLFRQMAS 549

Query: 467 KGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSK 526
           KG+ P +V YS ++HGL +  ++  A +  L+M K G    + T+N ++ G  QNN T  
Sbjct: 550 KGVNPGIVIYSTILHGLFQTRRIAAAKELYLWMIKCGIKLPIGTYNIILQGLCQNNCTDD 609

Query: 527 VVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
            + + H +   + +L   + TF+I++D L K  ++ E
Sbjct: 610 ALRMFHNLCLIDFHL--QNRTFNIMIDALLKGGRHDE 644



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 112/422 (26%), Positives = 193/422 (45%), Gaps = 13/422 (3%)

Query: 149 RPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGL 208
           R D+ TY  +I    R G+L +A     +++   +    I+      +S ++  LC +  
Sbjct: 93  RADLCTYSIVIGCCSRAGHLDLAFAALGRVIRTGWTAQAIT------FSPLLKGLCHDKR 146

Query: 209 VDKAKELFLE-MKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPR----PNL 263
              A ++ L  M   G  P       L+ G C     ++   L   M+    R    P++
Sbjct: 147 TSDAMDIALRRMPALGCTPNAFSYNILLKGLCDENRSQQALHLLHTMMADDTRGGCPPDV 206

Query: 264 LTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLS 323
           +++  +I+ L + G++++A  L + M+ +G++P+  TYN L+ GYC  G+   A  IF  
Sbjct: 207 VSYTTVINGLLREGQLDKAYCLFDEMLDQGMSPNCITYNCLLHGYCSSGKPKEAIGIFRK 266

Query: 324 MHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQ 383
           M   G +  VV+YN L+   CK     EA  ++  ++  G +     Y TLL G    G 
Sbjct: 267 MCRDGVEPDVVTYNTLMVYLCKNGRSMEARKVFDSMVKKGHKPDSSIYGTLLHGYATEGY 326

Query: 384 AGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNC 443
                +L D M     +PD   +NILI    K+  V EA+  F  +        I  +  
Sbjct: 327 LVQMHQLLDVMVRNGTQPDHYIFNILIGAYAKHGMVDEAMLAFSKMRQQGLHPNIVTYGT 386

Query: 444 LIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNG 503
           ++D LC+ G++D+A   F +L  +GL P  V +  +IHGLC   K +KA +  + M   G
Sbjct: 387 VMDALCRVGKVDDAMSQFDRLISEGLTPNGVVFRTLIHGLCACDKWDKAEELAVEMIGRG 446

Query: 504 CAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
             PN + FNTL++   +    ++   +   M   +  +  D  T++ ++D    D K  E
Sbjct: 447 ICPNTIFFNTLLNHLCKEGMVTRAKNIFDLMVRVD--VQCDVITYTTLIDGYCLDGKVDE 504

Query: 564 CS 565
            +
Sbjct: 505 AT 506



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 90/318 (28%), Positives = 158/318 (49%), Gaps = 7/318 (2%)

Query: 245 EEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSL 304
            E   + + + +  PR +L T++++I C  + G ++ A   L  +I+ G      T++ L
Sbjct: 78  RESPAVALSLFNRMPRADLCTYSIVIGCCSRAGHLDLAFAALGRVIRTGWTAQAITFSPL 137

Query: 305 MDGYCLVGRIDTAREIFL-SMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNG 363
           + G C   R   A +I L  M + GC     SYNIL+ G C     ++A+ L   ++++ 
Sbjct: 138 LKGLCHDKRTSDAMDIALRRMPALGCTPNAFSYNILLKGLCDENRSQQALHLLHTMMADD 197

Query: 364 VR----QTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCV 419
            R      V++Y T+++GL + GQ   A  LFDEM    + P+  TYN L+ G C +   
Sbjct: 198 TRGGCPPDVVSYTTVINGLLREGQLDKAYCLFDEMLDQGMSPNCITYNCLLHGYCSSGKP 257

Query: 420 QEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIM 479
           +EA+ +F  +  +  E  +  +N L+  LCK GR   A ++F  + +KG  P    Y  +
Sbjct: 258 KEAIGIFRKMCRDGVEPDVVTYNTLMVYLCKNGRSMEARKVFDSMVKKGHKPDSSIYGTL 317

Query: 480 IHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPER 539
           +HG   +G L + +  L  M +NG  P+   FN L+  + ++    + +    KM   ++
Sbjct: 318 LHGYATEGYLVQMHQLLDVMVRNGTQPDHYIFNILIGAYAKHGMVDEAMLAFSKMR--QQ 375

Query: 540 NLVPDDTTFSIVVDLLAK 557
            L P+  T+  V+D L +
Sbjct: 376 GLHPNIVTYGTVMDALCR 393


>gi|41152688|dbj|BAD08213.1| hypothetical protein [Oryza sativa Indica Group]
          Length = 762

 Score =  287 bits (735), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 168/498 (33%), Positives = 261/498 (52%), Gaps = 36/498 (7%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
           P   ++N +      +      I F +K+ S G+ PD +T N L++        LC   R
Sbjct: 264 PNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDY-------LCKNGR 316

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL----------------------SV 170
             EA  +F +M   G+ PD+ TY TL+ G+   G L                      ++
Sbjct: 317 STEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNI 376

Query: 171 ALRLHKKMVSGDYENGLISKT-------NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRG 223
            +  + K    D    + SK        N+ +Y  +I  LCK G VD A   F +M   G
Sbjct: 377 LICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEG 436

Query: 224 INPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEAN 283
           + P ++V T+LIH  C    W++   L +EMLD G   N + FN +I   CK G++ E+ 
Sbjct: 437 LTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESE 496

Query: 284 GLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGY 343
            L +LM++ G+ P+  TY++L+DGYCL G++D A ++  SM S G K   V+YN LINGY
Sbjct: 497 KLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGY 556

Query: 344 CKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDL 403
           C++  +++A++L+++++S+GV   +ITYN +L GLF   +   A++L+  +     + +L
Sbjct: 557 CRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLEL 616

Query: 404 STYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHK 463
           STYNI++ GLCKNN   EA+++F  L +   +     FN +I  L K GR D A +LF  
Sbjct: 617 STYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAA 676

Query: 464 LPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNK 523
           L   GLVP V TYS+M   L  +G LE+ +D  L ME+NGC  N    N+++   LQ   
Sbjct: 677 LSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGD 736

Query: 524 TSKVVELLHKMAEPERNL 541
            ++    L  + E   +L
Sbjct: 737 ITRAGTYLSMIDEKHFSL 754



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 146/521 (28%), Positives = 243/521 (46%), Gaps = 56/521 (10%)

Query: 72  SPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVEN 131
           +P + ++ +L G   +    D   +    +V  G   + +T   L+       +GLC + 
Sbjct: 84  TPTVHTYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLL-------KGLCADK 136

Query: 132 RIKEA-TWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISK 190
           R  +A   + + M      PDV +   L+ G C       AL L   M++ D   G  S 
Sbjct: 137 RTSDAMDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALEL-LHMMADDRGGG--SA 193

Query: 191 TNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGL 250
            ++ SY+ +I+   KEG  DKA   + EM  R I+P VV  +++I   C     ++   +
Sbjct: 194 PDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEV 253

Query: 251 FIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCL 310
              M+  G  PN +T+N ++   C   +  EA G L+ M   G+ PD  TYNSLMD  C 
Sbjct: 254 LTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCK 313

Query: 311 VGRIDTAREIFLSMHSKGCKHTVVSY---------------------------------- 336
            GR   AR+IF SM  +G +  + +Y                                  
Sbjct: 314 NGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHV 373

Query: 337 -NILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMK 395
            NILI  Y K   V+EAM ++ ++  +G+   V+TY  ++  L ++G    A   F++M 
Sbjct: 374 FNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMI 433

Query: 396 LYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEI----FNCLIDGLCKA 451
              + P++  Y  LI  LC  +   +A +L  +LEM   + GI +    FN +I   CK 
Sbjct: 434 DEGLTPNIIVYTSLIHSLCIFDKWDKAEEL--ILEM--LDRGICLNTIFFNSIIHSHCKE 489

Query: 452 GRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTF 511
           GR+  + +LF  + + G+ P V+TYS +I G C  GK+++A   L  M   G  P+ VT+
Sbjct: 490 GRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTY 549

Query: 512 NTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVV 552
           NTL++G+ + ++    + L  +M      + P+  T++I++
Sbjct: 550 NTLINGYCRVSRMDDALALFKEMVSS--GVSPNIITYNIIL 588



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 126/439 (28%), Positives = 204/439 (46%), Gaps = 35/439 (7%)

Query: 148 VRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKT---------------- 191
           V P V TYG LI   CR G L +       +V   +    I+ T                
Sbjct: 83  VTPTVHTYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAM 142

Query: 192 --------------NIFSYSIIIDSLCKEGLVDKAKELFLEM---KGRGINPAVVVCTTL 234
                         ++FS +I++  LC E    +A EL   M   +G G  P VV  TT+
Sbjct: 143 DIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTV 202

Query: 235 IHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGL 294
           I+GF   G+ ++    + EMLD    P+++T++ +I  LCKG  +++A  +L  M++ G+
Sbjct: 203 INGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGV 262

Query: 295 NPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMS 354
            P+  TYNS++ GYC   +   A      M S G +  VV+YN L++  CK     EA  
Sbjct: 263 MPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARK 322

Query: 355 LYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLC 414
           ++  +   G+   + TY TLL G    G       L D M    + PD   +NILI    
Sbjct: 323 IFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYA 382

Query: 415 KNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVV 474
           K   V EA+ +F  +  +     +  +  +I  LCK+G +D+A   F ++  +GL P ++
Sbjct: 383 KQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNII 442

Query: 475 TYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKM 534
            Y+ +IH LC   K +KA + +L M   G   N + FN+++H   +  +  +  +L   M
Sbjct: 443 VYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLM 502

Query: 535 AEPERNLVPDDTTFSIVVD 553
                 + P+  T+S ++D
Sbjct: 503 VRI--GVKPNVITYSTLID 519



 Score =  184 bits (468), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 130/473 (27%), Positives = 219/473 (46%), Gaps = 50/473 (10%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
           N  +   CK+G     EAR  F  MT     P I+++  L    A       + +    +
Sbjct: 305 NSLMDYLCKNG--RSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLM 362

Query: 102 VSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLING 161
           V  G+ PD    NILI  +  +E+       + EA  +F  M   G+ P+V+TYG +I  
Sbjct: 363 VRNGIHPDHHVFNILICAYAKQEK-------VDEAMLVFSKMRQHGLNPNVVTYGAVIGI 415

Query: 162 FCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKG 221
            C++G++  A+   ++M+    + GL    NI  Y+ +I SLC     DKA+EL LEM  
Sbjct: 416 LCKSGSVDDAMLYFEQMI----DEGLTP--NIIVYTSLIHSLCIFDKWDKAEELILEMLD 469

Query: 222 RGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINE 281
           RGI    +   ++IH  C  G   E   LF  M+ +G +PN++T++ +ID  C  GK++E
Sbjct: 470 RGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDE 529

Query: 282 ANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILI- 340
           A  LL  M   G+ PD  TYN+L++GYC V R+D A  +F  M S G    +++YNI++ 
Sbjct: 530 ATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQ 589

Query: 341 ----------------------------------NGYCKILNVEEAMSLYRQIISNGVRQ 366
                                             +G CK    +EA+ +++ +    ++ 
Sbjct: 590 GLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQL 649

Query: 367 TVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLF 426
              T+N ++  L + G+   A+ LF  +    + PD+ TY+++ + L +   ++E   LF
Sbjct: 650 ETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLF 709

Query: 427 HMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIM 479
             +E N       + N ++  L + G +  A      + +K       T S++
Sbjct: 710 LSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYLSMIDEKHFSLEASTASLL 762



 Score = 42.4 bits (98), Expect = 0.72,   Method: Compositional matrix adjust.
 Identities = 30/111 (27%), Positives = 56/111 (50%), Gaps = 6/111 (5%)

Query: 457 AWELFHKLPQKG---LVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNT 513
           A   ++++ + G   + PTV TY I+I   CR G+L+     L  + K G     +TF  
Sbjct: 68  AVSRYNRMARAGAGKVTPTVHTYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTP 127

Query: 514 LMHGFLQNNKTSKVVEL-LHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
           L+ G   + +TS  +++ L +M E   + +PD  + +I++  L  + +  E
Sbjct: 128 LLKGLCADKRTSDAMDIVLRRMTEL--SCMPDVFSCTILLKGLCDENRSQE 176


>gi|297848938|ref|XP_002892350.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297338192|gb|EFH68609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 493

 Score =  287 bits (735), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 163/458 (35%), Positives = 258/458 (56%), Gaps = 15/458 (3%)

Query: 47  ENCKSGI--INLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSI 104
           E  +SG+  I  N+A   F  M   +P P I  F+ L  A+AK + Y+AVIS +R +  +
Sbjct: 43  ERLRSGLHSIKFNDALTLFCDMAESRPLPSIVDFSRLLVAIAKLKKYEAVISLFRHIEIL 102

Query: 105 GLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCR 164
           G+  D  + + LI+CF       C  +R+  A      M+  G  P ++T+G+L+NGFC 
Sbjct: 103 GISHDLYSFSTLIDCF-------CRCSRLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCH 155

Query: 165 TGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGI 224
              +  A+ L  ++V   YE       N+  Y+ IIDSLC+   VD A ++   M+  GI
Sbjct: 156 VNRIQEAMSLVDQIVGLGYE------PNVVIYNTIIDSLCENRQVDTALDVLNHMEKMGI 209

Query: 225 NPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANG 284
            P V+   +LI     +G W     +  +M+ +G  P+++TF+ MID   K G++ EA  
Sbjct: 210 RPDVITYNSLITRLFHSGKWGVSARILSDMMRMGIHPDVITFSAMIDVFGKEGQLLEAKK 269

Query: 285 LLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYC 344
             + MIQR ++P+  TYNSL++G C+ G +D A+++   M SKG     V+YN L+NGYC
Sbjct: 270 QYDEMIQRSVDPNIVTYNSLINGLCIHGLLDEAKKVLNFMVSKGFFPNAVTYNTLVNGYC 329

Query: 345 KILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLS 404
           K   V++AM +   +  +GV     TYNTL  G  QAGQ   A+K+   M    V PD+ 
Sbjct: 330 KSKRVDDAMKILCVMSHDGVDGDTFTYNTLYQGYCQAGQFNAAEKVLARMVSCGVLPDIY 389

Query: 405 TYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKL 464
           T+N+L+DGLC++  +++A+     L+ ++   GI  +N +I G+CKA ++++AW LF  L
Sbjct: 390 TFNMLLDGLCEHGKIEKALVKLEDLQKSETVVGIITYNIIIKGMCKANKVEDAWYLFCSL 449

Query: 465 PQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKN 502
             KG+ P V+TY+ M+ GL RK    +A++    M+K+
Sbjct: 450 ALKGVSPDVITYTTMMIGLRRKRLWLEAHELYRKMKKD 487



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 109/432 (25%), Positives = 215/432 (49%), Gaps = 8/432 (1%)

Query: 132 RIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKT 191
           +  +A  LF +M      P ++ +  L+    +       + L + +        L    
Sbjct: 53  KFNDALTLFCDMAESRPLPSIVDFSRLLVAIAKLKKYEAVISLFRHI------EILGISH 106

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
           +++S+S +ID  C+   +  A     +M   G  P++V   +L++GFC     +E   L 
Sbjct: 107 DLYSFSTLIDCFCRCSRLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRIQEAMSLV 166

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
            +++ LG  PN++ +N +ID LC+  +++ A  +L  M + G+ PD  TYNSL+      
Sbjct: 167 DQIVGLGYEPNVVIYNTIIDSLCENRQVDTALDVLNHMEKMGIRPDVITYNSLITRLFHS 226

Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
           G+   +  I   M   G    V++++ +I+ + K   + EA   Y ++I   V   ++TY
Sbjct: 227 GKWGVSARILSDMMRMGIHPDVITFSAMIDVFGKEGQLLEAKKQYDEMIQRSVDPNIVTY 286

Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
           N+L++GL   G    A+K+ + M      P+  TYN L++G CK+  V +A+K+  ++  
Sbjct: 287 NSLINGLCIHGLLDEAKKVLNFMVSKGFFPNAVTYNTLVNGYCKSKRVDDAMKILCVMSH 346

Query: 432 NKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEK 491
           +  +     +N L  G C+AG+ + A ++  ++   G++P + T+++++ GLC  GK+EK
Sbjct: 347 DGVDGDTFTYNTLYQGYCQAGQFNAAEKVLARMVSCGVLPDIYTFNMLLDGLCEHGKIEK 406

Query: 492 ANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIV 551
           A   L  ++K+     ++T+N ++ G  + NK      L   +A   + + PD  T++ +
Sbjct: 407 ALVKLEDLQKSETVVGIITYNIIIKGMCKANKVEDAWYLFCSLA--LKGVSPDVITYTTM 464

Query: 552 VDLLAKDEKYHE 563
           +  L +   + E
Sbjct: 465 MIGLRRKRLWLE 476


>gi|15221540|ref|NP_172145.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75205637|sp|Q9SHK2.1|PPR17_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g06580
 gi|6692678|gb|AAF24812.1|AC007592_5 F12K11.8 [Arabidopsis thaliana]
 gi|332189887|gb|AEE28008.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 500

 Score =  287 bits (735), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 169/464 (36%), Positives = 252/464 (54%), Gaps = 16/464 (3%)

Query: 46  HENCKSGI--INLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVS 103
            E  +SG+  I  N+A   F  M    P P I  F+ L  A+AK   Y+AVIS +R L  
Sbjct: 48  RERLRSGLHSIKFNDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEM 107

Query: 104 IGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFC 163
           +G+  D  +   LI+CF       C   R+  A      M+  G  P ++T+G+L+NGFC
Sbjct: 108 LGISHDLYSFTTLIDCF-------CRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFC 160

Query: 164 RTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRG 223
                  A+ L  ++V   YE       N+  Y+ IIDSLC++G V+ A ++   MK  G
Sbjct: 161 HVNRFYEAMSLVDQIVGLGYE------PNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMG 214

Query: 224 INPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEAN 283
           I P VV   +LI     +G W     +  +M+ +G  P+++TF+ +ID   K G++ EA 
Sbjct: 215 IRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAK 274

Query: 284 GLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGY 343
                MIQR +NP+  TYNSL++G C+ G +D A+++   + SKG     V+YN LINGY
Sbjct: 275 KQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGY 334

Query: 344 CKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDL 403
           CK   V++ M +   +  +GV     TYNTL  G  QAG+   A+K+   M    V PD+
Sbjct: 335 CKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDM 394

Query: 404 STYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHK 463
            T+NIL+DGLC +  + +A+     L+ +K   GI  +N +I GLCKA ++++AW LF  
Sbjct: 395 YTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCS 454

Query: 464 LPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEK-NGCAP 506
           L  KG+ P V+TY  M+ GL RK    +A++    M+K +G  P
Sbjct: 455 LALKGVSPDVITYITMMIGLRRKRLWREAHELYRKMQKEDGLMP 498



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 111/434 (25%), Positives = 212/434 (48%), Gaps = 12/434 (2%)

Query: 132 RIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRL--HKKMVSGDYENGLIS 189
           +  +A  LF +M      P ++ +  L+    +       + L  H +M+   ++     
Sbjct: 59  KFNDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHD----- 113

Query: 190 KTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNG 249
              ++S++ +ID  C+   +  A     +M   G  P++V   +L++GFC    + E   
Sbjct: 114 ---LYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMS 170

Query: 250 LFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYC 309
           L  +++ LG  PN++ +N +ID LC+ G++N A  +L+ M + G+ PD  TYNSL+    
Sbjct: 171 LVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLF 230

Query: 310 LVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVI 369
             G    +  I   M   G    V++++ LI+ Y K   + EA   Y ++I   V   ++
Sbjct: 231 HSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIV 290

Query: 370 TYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHML 429
           TYN+L++GL   G    A+K+ + +      P+  TYN LI+G CK   V + +K+  ++
Sbjct: 291 TYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVM 350

Query: 430 EMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKL 489
             +  +     +N L  G C+AG+   A ++  ++   G+ P + T++I++ GLC  GK+
Sbjct: 351 SRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKI 410

Query: 490 EKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFS 549
            KA   L  ++K+     ++T+N ++ G  + +K      L   +A   + + PD  T+ 
Sbjct: 411 GKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLA--LKGVSPDVITYI 468

Query: 550 IVVDLLAKDEKYHE 563
            ++  L +   + E
Sbjct: 469 TMMIGLRRKRLWRE 482


>gi|413948663|gb|AFW81312.1| hypothetical protein ZEAMMB73_082399 [Zea mays]
          Length = 798

 Score =  287 bits (734), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 172/555 (30%), Positives = 283/555 (50%), Gaps = 54/555 (9%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CK+  +N  EA     +M      P   ++N++          +  +   +K+   GL P
Sbjct: 249 CKAQAMNKAEA--ILQHMFDKGVMPNTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQP 306

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           D +T  +LI  +       C   R  EA  +F +M+  G +P+   Y  L++G+   G L
Sbjct: 307 DVVTYILLIQYY-------CKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGAL 359

Query: 169 SVALRLHKKMVSGD-------------------------------YENGLISKTNIFSYS 197
                L   M+                                   +NGL  + ++ SYS
Sbjct: 360 IDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGL--RPDVVSYS 417

Query: 198 IIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDL 257
            +I  LCK G V+ A   F +M   G++P ++  T+LIHG C  G W++V  L  EM++ 
Sbjct: 418 TVIHILCKIGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINR 477

Query: 258 GPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTA 317
           G  P+ +  N ++D LCK G++ EA    +++I  G+ P+  +YN+L+DGYC VG++D +
Sbjct: 478 GIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPNVVSYNTLIDGYCFVGKMDES 537

Query: 318 REIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSG 377
            + F  M S G +    +YN L+NGY K   VE+A++LYR++    V+   IT N +L G
Sbjct: 538 IKQFDRMVSIGLRPDSWTYNALLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIILHG 597

Query: 378 LFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFG 437
           LFQAG+   A++L+ +M     +  + TYN ++ GLC+N+CV EA+++F  L   +FE  
Sbjct: 598 LFQAGRIVAARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELD 657

Query: 438 IEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLL 497
           +  FN +I+ L K GR+D A  LF  +  +G VP V+TYS+MI     +G LE+++D  L
Sbjct: 658 VWTFNIVINALLKVGRIDEAKSLFSAMVLRGPVPHVITYSLMIKSRIEEGLLEESDDLFL 717

Query: 498 YMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAK 557
            MEKNGCA +    N ++   L+     +    L K+   E+N   + +T ++++ ++++
Sbjct: 718 SMEKNGCAADSHMLNVIIRRLLEKGDVRRAGTYLTKI--DEKNFSVEASTAALLIPIVSE 775

Query: 558 D----------EKYH 562
                      EKYH
Sbjct: 776 KKYQKEVKFLPEKYH 790



 Score =  228 bits (581), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 151/464 (32%), Positives = 227/464 (48%), Gaps = 13/464 (2%)

Query: 111 LTLNILINCFGNKERGLCVENRIKEA-TWLFKNMIAFGVRPDVITYGTLINGFCRTGNLS 169
           +TLN LI       +GLC   R  +A   +F+ M   G  PDV +Y  LI G C      
Sbjct: 130 VTLNQLI-------KGLCDGKRTDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQ 182

Query: 170 VALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVV 229
            AL L   M +   + G     N+ SYS IID   KEG VDKA  LF EM G+G  P VV
Sbjct: 183 EALELLLHMTA---DGGYNCSPNVVSYSTIIDGFFKEGEVDKAYFLFDEMIGQGFPPDVV 239

Query: 230 VCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELM 289
             ++LI G C A    +   +   M D G  PN  T+N+MI   C  G++ EA  LL+ M
Sbjct: 240 TYSSLIDGLCKAQAMNKAEAILQHMFDKGVMPNTRTYNIMIRGYCSLGQLEEAVRLLKKM 299

Query: 290 IQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNV 349
              GL PD  TY  L+  YC +GR   AR +F SM  KG K     Y+IL++GY     +
Sbjct: 300 SGSGLQPDVVTYILLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGAL 359

Query: 350 EEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNIL 409
            +   L   +I +G+      +N L+    + G    A   F EM+   + PD+ +Y+ +
Sbjct: 360 IDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTV 419

Query: 410 IDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGL 469
           I  LCK   V++AV  F+ +        I  F  LI GLC  G      EL  ++  +G+
Sbjct: 420 IHILCKIGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGI 479

Query: 470 VPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVE 529
            P  +  + ++  LC++G++ +A DF   +   G  PNVV++NTL+ G+    K  + ++
Sbjct: 480 HPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPNVVSYNTLIDGYCFVGKMDESIK 539

Query: 530 LLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKSSYR 573
              +M      L PD  T++ +++   K+ +  +  A+ +  +R
Sbjct: 540 QFDRMVSI--GLRPDSWTYNALLNGYFKNGRVEDALALYREMFR 581



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 138/496 (27%), Positives = 233/496 (46%), Gaps = 51/496 (10%)

Query: 79  NLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATW 138
            L+ G     R  DA+   +R++  +G  PD  + N LI       +GLCVE + +EA  
Sbjct: 134 QLIKGLCDGKRTDDAMDMVFRRMPELGYTPDVFSYNALI-------KGLCVEKKSQEALE 186

Query: 139 LFKNMIAFG---VRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFS 195
           L  +M A G     P+V++Y T+I+GF + G +  A  L  +M+   +        ++ +
Sbjct: 187 LLLHMTADGGYNCSPNVVSYSTIIDGFFKEGEVDKAYFLFDEMIGQGF------PPDVVT 240

Query: 196 YSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEML 255
           YS +ID LCK   ++KA+ +   M  +G+ P       +I G+C  G  EE   L  +M 
Sbjct: 241 YSSLIDGLCKAQAMNKAEAILQHMFDKGVMPNTRTYNIMIRGYCSLGQLEEAVRLLKKMS 300

Query: 256 DLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV---- 311
             G +P+++T+ ++I   CK G+  EA  + + M+++G  P+   Y+ L+ GY       
Sbjct: 301 GSGLQPDVVTYILLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALI 360

Query: 312 -------------------------------GRIDTAREIFLSMHSKGCKHTVVSYNILI 340
                                          G +D A   F  M   G +  VVSY+ +I
Sbjct: 361 DVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVI 420

Query: 341 NGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVE 400
           +  CKI  VE+A+  + Q++S G+   +I++ +L+ GL   G+    ++L  EM    + 
Sbjct: 421 HILCKIGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIH 480

Query: 401 PDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWEL 460
           PD    N ++D LCK   V EA   F M+     +  +  +N LIDG C  G++D + + 
Sbjct: 481 PDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPNVVSYNTLIDGYCFVGKMDESIKQ 540

Query: 461 FHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQ 520
           F ++   GL P   TY+ +++G  + G++E A      M +       +T N ++HG  Q
Sbjct: 541 FDRMVSIGLRPDSWTYNALLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIILHGLFQ 600

Query: 521 NNKTSKVVELLHKMAE 536
             +     EL  KM +
Sbjct: 601 AGRIVAARELYMKMVD 616



 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 111/370 (30%), Positives = 175/370 (47%), Gaps = 14/370 (3%)

Query: 212 AKELFLEMKGRGINPAVV---VCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNV 268
           A  LF  M   G+N       +   LI  FC  G  +     F   L +G R   +T N 
Sbjct: 75  AVSLFNTMARSGVNMMAANRYIIGILIRCFCTVGRLDLAFAAFALFLKMGWRVQNVTLNQ 134

Query: 269 MIDCLCKGGKINEA-NGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSK 327
           +I  LC G + ++A + +   M + G  PD F+YN+L+ G C+  +   A E+ L M + 
Sbjct: 135 LIKGLCDGKRTDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLLHMTAD 194

Query: 328 G---CKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQA 384
           G   C   VVSY+ +I+G+ K   V++A  L+ ++I  G    V+TY++L+ GL +A   
Sbjct: 195 GGYNCSPNVVSYSTIIDGFFKEGEVDKAYFLFDEMIGQGFPPDVVTYSSLIDGLCKAQAM 254

Query: 385 GYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCL 444
             A+ +   M    V P+  TYNI+I G C    ++EAV+L   +  +  +  +  +  L
Sbjct: 255 NKAEAILQHMFDKGVMPNTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYILL 314

Query: 445 IDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGC 504
           I   CK GR   A  +F  + +KG  P    Y I++HG   KG L    D L  M ++G 
Sbjct: 315 IQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGI 374

Query: 505 APNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAK-----DE 559
                 FN L+  + ++    K +    +M   +  L PD  ++S V+ +L K     D 
Sbjct: 375 PFEHRAFNILICAYAKHGAVDKAMTAFTEMR--QNGLRPDVVSYSTVIHILCKIGRVEDA 432

Query: 560 KYHECSAVSK 569
            YH    VS+
Sbjct: 433 VYHFNQMVSE 442



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 98/367 (26%), Positives = 157/367 (42%), Gaps = 61/367 (16%)

Query: 245 EEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINE-------ANGLLELMIQRGLN-- 295
           E+   LF E+L      ++  FN ++  + +    +        A  L   M + G+N  
Sbjct: 31  EDALNLFDELLPQARPASVHAFNSVLTVVARADSSSSPRHSAALAVSLFNTMARSGVNMM 90

Query: 296 -PDRFTYNSLMDGYCLVGRIDTARE----------------------------------- 319
             +R+    L+  +C VGR+D A                                     
Sbjct: 91  AANRYIIGILIRCFCTVGRLDLAFAAFALFLKMGWRVQNVTLNQLIKGLCDGKRTDDAMD 150

Query: 320 -IFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNG---VRQTVITYNTLL 375
            +F  M   G    V SYN LI G C     +EA+ L   + ++G       V++Y+T++
Sbjct: 151 MVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLLHMTADGGYNCSPNVVSYSTII 210

Query: 376 SGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFE 435
            G F+ G+   A  LFDEM      PD+ TY+ LIDGLCK   + +A  +   +    F+
Sbjct: 211 DGFFKEGEVDKAYFLFDEMIGQGFPPDVVTYSSLIDGLCKAQAMNKAEAILQHM----FD 266

Query: 436 FGI----EIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEK 491
            G+      +N +I G C  G+L+ A  L  K+   GL P VVTY ++I   C+ G+  +
Sbjct: 267 KGVMPNTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYILLIQYYCKIGRCAE 326

Query: 492 ANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVP-DDTTFSI 550
           A      M + G  PN   ++ L+HG+        V +LL  M    R+ +P +   F+I
Sbjct: 327 ARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMI---RDGIPFEHRAFNI 383

Query: 551 VVDLLAK 557
           ++   AK
Sbjct: 384 LICAYAK 390


>gi|357460281|ref|XP_003600422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355489470|gb|AES70673.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 512

 Score =  286 bits (733), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 157/454 (34%), Positives = 256/454 (56%), Gaps = 35/454 (7%)

Query: 63  FGYMTHMQ-PSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCF- 120
           F ++ H + P+P I  F  + G++ K  HY  V+S +R++   G+  + +TL+ILINCF 
Sbjct: 56  FNHLLHQKNPTPSIIQFGKILGSLVKANHYSIVVSLHRQMEFNGIASNLVTLSILINCFS 115

Query: 121 --GNKE-------------------------RGLCVENRIKEATWLFKNMIAFGVRPDVI 153
             G+                           +GLC++  I +A      ++A G + + +
Sbjct: 116 QLGHNSLSFSVFSNILKKGYEPDAITLTTLIKGLCLKGDIHKALHFHDKVLALGFQLNQV 175

Query: 154 TYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAK 213
           +Y TLING C+ G    AL + +++      +G + + ++  Y+ IID +CK+ LV+ A 
Sbjct: 176 SYRTLINGLCKVGQTKAALEMLRRI------DGKLVRLDVVMYNTIIDGVCKDKLVNDAF 229

Query: 214 ELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCL 273
           + + EM  + I P VV   TLI G C  G  ++  GL  +M+     P + TF++++D  
Sbjct: 230 DFYSEMVAKRICPTVVTYNTLICGLCIMGQLKDAIGLLHKMILENINPTVYTFSILVDAF 289

Query: 274 CKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTV 333
           CK GK+ EA  +  +M+++ + P+  TYNSLM+GYCLV  ++ A  IF +M   G    V
Sbjct: 290 CKEGKVKEAKNVFVVMMKKDVKPNIVTYNSLMNGYCLVNEVNKAESIFNTMAQIGVAPDV 349

Query: 334 VSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDE 393
            SY+I+I+G+CKI  V+EAM L+ ++    +   V+TYN+L+ GL ++G+  YA KL  E
Sbjct: 350 HSYSIMISGFCKIKMVDEAMKLFEEMHCKQIFPDVVTYNSLIDGLCKSGRISYALKLIGE 409

Query: 394 MKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGR 453
           M      P++ TYN L+D LCKN+ V +A++L   L+ +  +  +  +N LI+GLCK+GR
Sbjct: 410 MHDRGQPPNIITYNSLLDALCKNHHVDKAIELLTKLKDHNIQPSVCTYNILINGLCKSGR 469

Query: 454 LDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKG 487
           L +A ++F  +   G    V TY+ MI G C+KG
Sbjct: 470 LKDAQKVFEDVLVNGYNIDVYTYNTMIKGFCKKG 503



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 117/418 (27%), Positives = 220/418 (52%), Gaps = 8/418 (1%)

Query: 150 PDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLV 209
           P +I +G ++    +  + S+ + LH++M      NG+ S  N+ + SI+I+   + G  
Sbjct: 67  PSIIQFGKILGSLVKANHYSIVVSLHRQMEF----NGIAS--NLVTLSILINCFSQLGHN 120

Query: 210 DKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVM 269
             +  +F  +  +G  P  +  TTLI G C  G+  +      ++L LG + N +++  +
Sbjct: 121 SLSFSVFSNILKKGYEPDAITLTTLIKGLCLKGDIHKALHFHDKVLALGFQLNQVSYRTL 180

Query: 270 IDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGC 329
           I+ LCK G+   A  +L  +  + +  D   YN+++DG C    ++ A + +  M +K  
Sbjct: 181 INGLCKVGQTKAALEMLRRIDGKLVRLDVVMYNTIIDGVCKDKLVNDAFDFYSEMVAKRI 240

Query: 330 KHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQK 389
             TVV+YN LI G C +  +++A+ L  ++I   +  TV T++ L+    + G+   A+ 
Sbjct: 241 CPTVVTYNTLICGLCIMGQLKDAIGLLHKMILENINPTVYTFSILVDAFCKEGKVKEAKN 300

Query: 390 LFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLC 449
           +F  M   +V+P++ TYN L++G C  N V +A  +F+ +        +  ++ +I G C
Sbjct: 301 VFVVMMKKDVKPNIVTYNSLMNGYCLVNEVNKAESIFNTMAQIGVAPDVHSYSIMISGFC 360

Query: 450 KAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVV 509
           K   +D A +LF ++  K + P VVTY+ +I GLC+ G++  A   +  M   G  PN++
Sbjct: 361 KIKMVDEAMKLFEEMHCKQIFPDVVTYNSLIDGLCKSGRISYALKLIGEMHDRGQPPNII 420

Query: 510 TFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAV 567
           T+N+L+    +N+   K +ELL K+   + N+ P   T++I+++ L K  +  +   V
Sbjct: 421 TYNSLLDALCKNHHVDKAIELLTKLK--DHNIQPSVCTYNILINGLCKSGRLKDAQKV 476


>gi|224713518|gb|ACN62066.1| PPR-817 [Zea mays]
          Length = 817

 Score =  286 bits (732), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 174/545 (31%), Positives = 284/545 (52%), Gaps = 42/545 (7%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
           N  +H  CK+  ++  EA  F   M + +  P   ++N L    +    +   +  ++++
Sbjct: 261 NSVVHALCKARAMDKAEA--FLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEM 318

Query: 102 VSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLING 161
               +LPD +TL++L+         LC   +IKEA  +F  M   G  PDV +Y  ++NG
Sbjct: 319 RRHSILPDVVTLSMLMG-------SLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNG 371

Query: 162 FCRTGNLSVALRLHKKMVSGD---------------YEN-GLISKT-------------- 191
           +   G L     L   M+ GD               Y N G++ K               
Sbjct: 372 YATKGCLVDMTDLFDLML-GDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKP 430

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
           ++ +Y  +I +LC+ G +D A E F +M  +G+ P       LI GFC  G+  +   L 
Sbjct: 431 DVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELI 490

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
            E+++ G   +++ F+ +I+ LCK G++ +A  + +L +  GL+PD   YN LMDGYCLV
Sbjct: 491 SEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLV 550

Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
           G+++ A  +F +M S G +  VV Y  L+NGYCKI  ++E +SL+R+++  G++ + I Y
Sbjct: 551 GKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILY 610

Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
           + ++ GLF+AG+   A+  F EM    +  D+ TYNI++ GL KN C  EA+ LF  L  
Sbjct: 611 SIIIDGLFEAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRA 670

Query: 432 NKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEK 491
              +  I   N +IDG+ +  R++ A +LF  + +  LVP+VVTYSIMI  L ++G +E+
Sbjct: 671 MNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEE 730

Query: 492 ANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIV 551
           A D    M+  GC PN    N ++   L+ N+  +    L K+   ERN   +  T  ++
Sbjct: 731 AEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRAGAYLSKI--DERNFSLEHLTAMLL 788

Query: 552 VDLLA 556
           VDL +
Sbjct: 789 VDLFS 793



 Score =  229 bits (584), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 147/518 (28%), Positives = 244/518 (47%), Gaps = 49/518 (9%)

Query: 72  SPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVEN 131
           SP   ++ +L     +    +  ++F+ +L+  GL  + +  N L+        G C   
Sbjct: 111 SPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLE-------GFCEAK 163

Query: 132 RIKEA-TWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISK 190
           R  EA   L       G  PDV +Y  L+   C  G    A  L + M  G    G +  
Sbjct: 164 RTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEG----GAVCS 219

Query: 191 TNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCA--------- 241
            N+ +Y+ +ID   KEG V+KA +LF EM  RGI P +V   +++H  C A         
Sbjct: 220 PNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAF 279

Query: 242 --------------------------GNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCK 275
                                     G W+E   +F EM      P+++T ++++  LCK
Sbjct: 280 LRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCK 339

Query: 276 GGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVS 335
            GKI EA  + + M  +G NPD F+YN +++GY   G +    ++F  M   G      +
Sbjct: 340 YGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYT 399

Query: 336 YNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMK 395
           +N+LI  Y     +++AM ++ ++  +GV+  V+TY T+++ L + G+   A + F++M 
Sbjct: 400 FNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMI 459

Query: 396 LYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLD 455
              V PD   YN LI G C +  + +A +L   +  N     I  F+ +I+ LCK GR+ 
Sbjct: 460 DQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVM 519

Query: 456 NAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLM 515
           +A  +F      GL P  V Y++++ G C  GK+EKA      M   G  PNVV + TL+
Sbjct: 520 DAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLV 579

Query: 516 HGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
           +G+ +  +  + + L  +M   +R + P    +SI++D
Sbjct: 580 NGYCKIGRIDEGLSLFREML--QRGIKPSTILYSIIID 615



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 144/532 (27%), Positives = 259/532 (48%), Gaps = 26/532 (4%)

Query: 32  AAVSSPE-----TQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVA 86
            AV SP      T ++ F  E       ++N+A   F  M      P + ++N +  A+ 
Sbjct: 215 GAVCSPNVVAYNTVIDGFFKEG------DVNKACDLFKEMVQRGIPPDLVTYNSVVHALC 268

Query: 87  KNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAF 146
           K R  D   +F R++V+  +LP+  T N LI  +G    G     + KEA  +FK M   
Sbjct: 269 KARAMDKAEAFLRQMVNKRVLPNNWTYNNLI--YGYSSTG-----QWKEAVRVFKEMRRH 321

Query: 147 GVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKE 206
            + PDV+T   L+   C+ G +  A  +   M             ++FSY+I+++    +
Sbjct: 322 SILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKG------QNPDVFSYNIMLNGYATK 375

Query: 207 GLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTF 266
           G +    +LF  M G GI P       LI  +   G  ++   +F EM D G +P+++T+
Sbjct: 376 GCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTY 435

Query: 267 NVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHS 326
             +I  LC+ GK+++A      MI +G+ PD++ YN L+ G+C  G +  A+E+   + +
Sbjct: 436 RTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMN 495

Query: 327 KGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGY 386
            G    +V ++ +IN  CK+  V +A +++   ++ G+    + YN L+ G    G+   
Sbjct: 496 NGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEK 555

Query: 387 AQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLID 446
           A ++FD M    +EP++  Y  L++G CK   + E + LF  +     +    +++ +ID
Sbjct: 556 ALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIID 615

Query: 447 GLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAP 506
           GL +AGR   A   FH++ + G+   + TY+I++ GL +    ++A      +       
Sbjct: 616 GLFEAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKI 675

Query: 507 NVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKD 558
           N++T NT++ G  Q  +  +  +L   ++     LVP   T+SI++  L K+
Sbjct: 676 NIITLNTMIDGMFQTRRVEEAKDLFASISRSR--LVPSVVTYSIMITNLIKE 725



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 86/319 (26%), Positives = 148/319 (46%), Gaps = 14/319 (4%)

Query: 258 GPR---PNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRI 314
           GPR   P   T+ +++DC  +  +   A      +++ GL  +    N L++G+C   R 
Sbjct: 106 GPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRT 165

Query: 315 DTAREIFLSMHSK-GCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGV--RQTVITY 371
           D A +I L    + GC   V SY+IL+   C      +A  L R +   G      V+ Y
Sbjct: 166 DEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAY 225

Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
           NT++ G F+ G    A  LF EM    + PDL TYN ++  LCK   + +A      +  
Sbjct: 226 NTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVN 285

Query: 432 NKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEK 491
            +       +N LI G    G+   A  +F ++ +  ++P VVT S+++  LC+ GK+++
Sbjct: 286 KRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKE 345

Query: 492 ANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIV 551
           A D    M   G  P+V ++N +++G+        + +L   M      + PD  TF+++
Sbjct: 346 ARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGD--GIAPDFYTFNVL 403

Query: 552 VDLLAKDEKYHECSAVSKS 570
           +      + Y  C  + K+
Sbjct: 404 I------KAYANCGMLDKA 416


>gi|334183626|ref|NP_176639.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122242336|sp|Q0WKZ3.1|PP105_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g64580
 gi|110741328|dbj|BAF02214.1| hypothetical protein [Arabidopsis thaliana]
 gi|332196134|gb|AEE34255.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 523

 Score =  285 bits (729), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 168/483 (34%), Positives = 259/483 (53%), Gaps = 17/483 (3%)

Query: 54  INLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTL 113
           I  ++A   F  M   +P P I  F  +   +AK   +D VI  Y K+ ++G+  D  + 
Sbjct: 58  IKFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSF 117

Query: 114 NILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALR 173
            ILI+CF       C  +R+  A  L   M+  G RP ++T G+L+NGFC+      A+ 
Sbjct: 118 TILIHCF-------CRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVS 170

Query: 174 LHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTT 233
           L   M      +G     N+  Y+ +I+ LCK   ++ A E+F  M+ +GI    V   T
Sbjct: 171 LVDSM------DGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNT 224

Query: 234 LIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRG 293
           LI G   +G W +   L  +M+     PN++ F  +ID   K G + EA  L + MI+R 
Sbjct: 225 LISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRS 284

Query: 294 LNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAM 353
           + P+ FTYNSL++G+C+ G +  A+ +F  M SKGC   VV+YN LI G+CK   VE+ M
Sbjct: 285 VVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGM 344

Query: 354 SLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGL 413
            L+ ++   G+     TYNTL+ G  QAG+   AQK+F+ M    V PD+ TYNIL+D L
Sbjct: 345 KLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCL 404

Query: 414 CKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTV 473
           C N  +++A+ +   L+ ++ +  I  +N +I GLC+  +L  AW LF  L +KG+ P  
Sbjct: 405 CNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDA 464

Query: 474 VTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHK 533
           + Y  MI GLCRKG   +A+     M+++G  P+   ++      L+++ TS   EL+  
Sbjct: 465 IAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYDET----LRDHYTSLSAELIKA 520

Query: 534 MAE 536
             E
Sbjct: 521 AHE 523



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 108/382 (28%), Positives = 194/382 (50%), Gaps = 2/382 (0%)

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
           +I  ++ ++  + K    D    L+ +M+  GI+  +   T LIH FC          L 
Sbjct: 78  SIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALL 137

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
            +M+ LG RP+++T   +++  C+G +  EA  L++ M   G  P+   YN++++G C  
Sbjct: 138 GKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKN 197

Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
             ++ A E+F  M  KG +   V+YN LI+G        +A  L R ++   +   VI +
Sbjct: 198 RDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFF 257

Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
             L+    + G    A+ L+ EM   +V P++ TYN LI+G C + C+ +A  +F ++  
Sbjct: 258 TALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVS 317

Query: 432 NKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEK 491
                 +  +N LI G CK+ R+++  +LF ++  +GLV    TY+ +IHG C+ GKL  
Sbjct: 318 KGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNV 377

Query: 492 ANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIV 551
           A      M   G +P++VT+N L+     N K  K + ++  + + E ++  D  T++I+
Sbjct: 378 AQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDV--DIITYNII 435

Query: 552 VDLLAKDEKYHECSAVSKSSYR 573
           +  L + +K  E   + +S  R
Sbjct: 436 IQGLCRTDKLKEAWCLFRSLTR 457



 Score =  129 bits (324), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 88/309 (28%), Positives = 155/309 (50%), Gaps = 2/309 (0%)

Query: 244 WEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNS 303
           +++   LF EML   P P+++ F  ++  + K  K +    L   M   G++ D +++  
Sbjct: 60  FDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTI 119

Query: 304 LMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNG 363
           L+  +C   R+  A  +   M   G + ++V+   L+NG+C+    +EA+SL   +   G
Sbjct: 120 LIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFG 179

Query: 364 VRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAV 423
               V+ YNT+++GL +      A ++F  M+   +  D  TYN LI GL  +    +A 
Sbjct: 180 FVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAA 239

Query: 424 KLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGL 483
           +L   +   K +  +  F  LID   K G L  A  L+ ++ ++ +VP V TY+ +I+G 
Sbjct: 240 RLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGF 299

Query: 484 CRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVP 543
           C  G L  A      M   GC P+VVT+NTL+ GF ++ +    ++L  +M    + LV 
Sbjct: 300 CIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMT--YQGLVG 357

Query: 544 DDTTFSIVV 552
           D  T++ ++
Sbjct: 358 DAFTYNTLI 366



 Score = 89.7 bits (221), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 69/280 (24%), Positives = 129/280 (46%), Gaps = 18/280 (6%)

Query: 288 LMIQRGLNPDRFTYNSLMDG--------------YCLVGRIDTAREIFLSMHSKGCKHTV 333
           L+++RG NP+     S                  +C+  + D A  +F  M       ++
Sbjct: 22  LLLERGNNPETSLSRSFSGASHHHHYRERLRNELHCI--KFDDAFSLFCEMLQSRPIPSI 79

Query: 334 VSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDE 393
           V +  ++    K+   +  + LY ++ + G+   + ++  L+    +  +   A  L  +
Sbjct: 80  VDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGK 139

Query: 394 MKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGR 453
           M      P + T   L++G C+ N  QEAV L   ++   F   + I+N +I+GLCK   
Sbjct: 140 MMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRD 199

Query: 454 LDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNT 513
           L+NA E+F+ + +KG+    VTY+ +I GL   G+   A   L  M K    PNV+ F  
Sbjct: 200 LNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTA 259

Query: 514 LMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
           L+  F++     +   L  +M    R++VP+  T++ +++
Sbjct: 260 LIDTFVKEGNLLEARNLYKEMI--RRSVVPNVFTYNSLIN 297


>gi|242081015|ref|XP_002445276.1| hypothetical protein SORBIDRAFT_07g007630 [Sorghum bicolor]
 gi|241941626|gb|EES14771.1| hypothetical protein SORBIDRAFT_07g007630 [Sorghum bicolor]
          Length = 768

 Score =  285 bits (729), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 174/558 (31%), Positives = 283/558 (50%), Gaps = 49/558 (8%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CK+ +++   A+  F +M      P   ++  L         +  V+   +++ + GL P
Sbjct: 213 CKAQMVD--RAKGVFQHMIDKGVRPNNHTYTCLIHGYLSTGKWKEVVQMLQEMSTHGLQP 270

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           D +   +L++        LC   R  EA  +F ++I  G++P V  YG L++G+   G L
Sbjct: 271 DCVIYAVLLDY-------LCKNGRCTEARNIFDSLIRKGIKPHVTIYGILLHGYATEGAL 323

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFS--------------------------------- 195
           S        MV     NG+    +IF+                                 
Sbjct: 324 SEMHSFLDLMV----RNGVSPDHHIFNIMFNAYAKKAMIDEAMHIFDKMRQQWLSPGVVN 379

Query: 196 YSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEML 255
           Y  +ID+LCK G VD A   F +M   G+ P + V ++L++G C    WE+   LF E+L
Sbjct: 380 YGALIDALCKLGRVDDAVLKFNQMINEGVTPDIFVFSSLVYGLCTVDKWEKAEKLFFEVL 439

Query: 256 DLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRID 315
           D G R N   FN+++  LC+ G++ EA  L++LM++  + PD  +YN+L+DG+CL GRID
Sbjct: 440 DQGIRLNAAFFNILMCNLCREGRVMEAQRLIDLMLRVDVRPDVISYNTLVDGHCLTGRID 499

Query: 316 TAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLL 375
            A ++   M S G K    +YN L++GYCK   +++A SL+R+++  G+   V+TYNT+L
Sbjct: 500 EAAKLLDVMVSIGLKPDEFTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPGVVTYNTIL 559

Query: 376 SGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFE 435
            GLFQ G+   A++L+  M     + D+ TY I+++GLC+NN V EA K+F  L     +
Sbjct: 560 HGLFQIGRFCEAKELYLNMINNRRKCDIYTYTIILNGLCRNNFVDEAFKMFQSLCSKDLQ 619

Query: 436 FGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDF 495
             I   N +I  L K GR ++A +LF  +   GLVP V TY ++   L ++G LE+ ++ 
Sbjct: 620 LDIFTINIMIGALLKGGRKEDAMDLFATISAYGLVPDVETYRLIAENLIKEGSLEELDEL 679

Query: 496 LLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLL 555
              ME+NG APN    N L+   L      +    L K+   E+N   + +T S+++ + 
Sbjct: 680 FSAMEENGTAPNSRMLNALVRWLLHRGDIGRAGVYLSKL--DEKNFSLEASTTSMLISIY 737

Query: 556 AKDEKYHECSAVSKSSYR 573
           ++ E Y + +      YR
Sbjct: 738 SRAE-YQQLAKSLPEKYR 754



 Score =  246 bits (629), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 176/639 (27%), Positives = 291/639 (45%), Gaps = 81/639 (12%)

Query: 29  RQIAAVSSPETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKN 88
           R++ A +    +L   +    +SG + L++A   F  M        + +FN L   V++ 
Sbjct: 5   RRVTAAADRCLELERVIAGRARSGSLGLDDALKLFDEMLTYARPASVRTFNRLLTVVSRA 64

Query: 89  RHYDA---VISFYRKLV---SIGLLPDFLTLNILINC----------------------- 119
           R   A   V+S + +++   S+ + P   T  ILI C                       
Sbjct: 65  RCSSASELVVSLFNRMIRECSVKVAPSSCTYTILIGCFCRMGRLKHGFAAFGLILKTGWS 124

Query: 120 ------FGNKERGLCVENRIKEAT-WLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVAL 172
                 FG   +GLC   R+ EAT  L + M  FG   +VI+Y  L+ G C       AL
Sbjct: 125 LNNTVIFGQLLKGLCDAKRVDEATDILLRRMPEFGCTLNVISYNILLKGLCNEKRAEEAL 184

Query: 173 RLHKKMVSGDYENGLISKT-NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVC 231
            L   M     ++G  S T N+ +Y+ +ID LCK  +VD+AK +F  M  +G+ P     
Sbjct: 185 ELMHMMA----DDGDGSHTPNVVTYTTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTY 240

Query: 232 TTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEA--------- 282
           T LIHG+   G W+EV  +  EM   G +P+ + + V++D LCK G+  EA         
Sbjct: 241 TCLIHGYLSTGKWKEVVQMLQEMSTHGLQPDCVIYAVLLDYLCKNGRCTEARNIFDSLIR 300

Query: 283 --------------------------NGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDT 316
                                     +  L+LM++ G++PD   +N + + Y     ID 
Sbjct: 301 KGIKPHVTIYGILLHGYATEGALSEMHSFLDLMVRNGVSPDHHIFNIMFNAYAKKAMIDE 360

Query: 317 AREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLS 376
           A  IF  M  +     VV+Y  LI+  CK+  V++A+  + Q+I+ GV   +  +++L+ 
Sbjct: 361 AMHIFDKMRQQWLSPGVVNYGALIDALCKLGRVDDAVLKFNQMINEGVTPDIFVFSSLVY 420

Query: 377 GLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEF 436
           GL    +   A+KLF E+    +  + + +NIL+  LC+   V EA +L  ++       
Sbjct: 421 GLCTVDKWEKAEKLFFEVLDQGIRLNAAFFNILMCNLCREGRVMEAQRLIDLMLRVDVRP 480

Query: 437 GIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFL 496
            +  +N L+DG C  GR+D A +L   +   GL P   TY+ ++HG C+  +++ A    
Sbjct: 481 DVISYNTLVDGHCLTGRIDEAAKLLDVMVSIGLKPDEFTYNTLLHGYCKARRIDDAYSLF 540

Query: 497 LYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLA 556
             M   G  P VVT+NT++HG  Q  +  +  EL   M    R    D  T++I+++ L 
Sbjct: 541 REMLMKGLTPGVVTYNTILHGLFQIGRFCEAKELYLNMINNRRKC--DIYTYTIILNGLC 598

Query: 557 KDEKYHECSAVSKSSYRACLYVTIFQPSSLGSMIGCTVR 595
           ++    E   + +S     L + IF   ++  MIG  ++
Sbjct: 599 RNNFVDEAFKMFQSLCSKDLQLDIF---TINIMIGALLK 634


>gi|302762673|ref|XP_002964758.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
 gi|300166991|gb|EFJ33596.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
          Length = 552

 Score =  285 bits (728), Expect = 7e-74,   Method: Compositional matrix adjust.
 Identities = 175/521 (33%), Positives = 272/521 (52%), Gaps = 52/521 (9%)

Query: 81  LFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLF 140
           +   + K+R  D  I+ ++++V   + PD +T   LI+       GL  + R+KEA  LF
Sbjct: 1   MIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALID-------GLGKQRRVKEAYDLF 53

Query: 141 KNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIII 200
           +   A G  P V+TY T+I+G C+ G +  AL L+  M       G   +  + +YS +I
Sbjct: 54  EEARAKGCHPTVVTYNTMIDGLCKCGRIENALTLYDDMA---IHFGF--RPTVVTYSTLI 108

Query: 201 DSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPR 260
           D LC++  VDK  +L  EM GRG  P  V   TL++     G  +E   L  +M   G  
Sbjct: 109 DGLCRDHEVDKGCKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCP 168

Query: 261 PNLLTFNVMIDCLCKGGKINEANGLLE--LMIQRGLNPDRFTYNSLMDGYCLVGRIDTAR 318
           P L+TF ++I  LCK G+I  A  +++   MI+ GL+PD  T+NS++DG C   RI  A 
Sbjct: 169 PELITFGLIIKGLCKEGEIEAAFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAH 228

Query: 319 EIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGL 378
            +F     +GC+  VV+Y+ LI+G  K+  ++EA+ L  +++  G R   +TY+T++ GL
Sbjct: 229 NVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGL 288

Query: 379 FQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFH-MLEMN----- 432
            + G+   A  +  +M+     PD  TYN LIDG  K   ++EAV L   MLE       
Sbjct: 289 LKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSV 348

Query: 433 --------------KFEFGIEI---------------FNCLIDGLCKAGRLDNAWELFHK 463
                         +F+  +EI               ++ ++DGLCKAGR+  A   F K
Sbjct: 349 VTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEK 408

Query: 464 LPQKGLV-PTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNN 522
           + +  +V P V+ YS +I GLC+ GK+++A +FL  M + G  P+VVTF+ L++G     
Sbjct: 409 MARDEVVAPHVIAYSALIDGLCKAGKIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAG 468

Query: 523 KTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
           +    +EL   MAE  R  VPD  T++ +VD L +  +  E
Sbjct: 469 RIDTGLELFRGMAE--RGCVPDMVTYATLVDRLCRASRVDE 507



 Score =  261 bits (668), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 159/532 (29%), Positives = 268/532 (50%), Gaps = 44/532 (8%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CKS    +++A   F  M      P + ++  L   + K R        + +  + G  P
Sbjct: 6   CKSR--KVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKGCHP 63

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNM-IAFGVRPDVITYGTLINGFCRTGN 167
             +T N +I+       GLC   RI+ A  L+ +M I FG RP V+TY TLI+G CR   
Sbjct: 64  TVVTYNTMID-------GLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHE 116

Query: 168 LSVALRLHKKMVS-GDYENGLISKT----------------------------NIFSYSI 198
           +    +L ++M   G   N +   T                             + ++ +
Sbjct: 117 VDKGCKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGL 176

Query: 199 IIDSLCKEGLVDKAKELFLEM--KGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLD 256
           II  LCKEG ++ A  +  EM     G++P V+   +++ G C      + + +F   L+
Sbjct: 177 IIKGLCKEGEIEAAFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALE 236

Query: 257 LGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDT 316
            G RPN++T++ +ID L K  K++EA  LL  M++ G   +  TY++++DG   VGR++ 
Sbjct: 237 RGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMED 296

Query: 317 AREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLS 376
           A  +   M   GC    V+YN LI+G+ K   + EA+ L R+++  G   +V+TY TL  
Sbjct: 297 AVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCH 356

Query: 377 GLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKF-E 435
           GL ++G+   A ++ D M      P+  TY+ ++DGLCK   V EA+  F  +  ++   
Sbjct: 357 GLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVA 416

Query: 436 FGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDF 495
             +  ++ LIDGLCKAG++D A+E   ++ + G +P VVT+SI+I+GLC  G+++   + 
Sbjct: 417 PHVIAYSALIDGLCKAGKIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLEL 476

Query: 496 LLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTT 547
              M + GC P++VT+ TL+    + ++  +  +L  +M      L PD +T
Sbjct: 477 FRGMAERGCVPDMVTYATLVDRLCRASRVDEAFDLFQQMRSD--GLSPDRST 526



 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 139/488 (28%), Positives = 227/488 (46%), Gaps = 48/488 (9%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
           N  +   CK G I  N    +     H    P + +++ L   + ++   D       ++
Sbjct: 69  NTMIDGLCKCGRIE-NALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKGCKLLEEM 127

Query: 102 VSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLING 161
              G  P+ +T N L+N        L  + R KEA  L + M A G  P++IT+G +I G
Sbjct: 128 AGRGCAPNAVTYNTLVN-------ALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIKG 180

Query: 162 FCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKG 221
            C+ G +  A R+  +M     E+GL    ++ +++ ++D LCKE  +  A  +F     
Sbjct: 181 LCKEGEIEAAFRVVDEMFM--IESGL--SPDVITFNSVLDGLCKEQRILDAHNVFKRALE 236

Query: 222 RGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINE 281
           RG  P VV  +TLI G       +E   L  +M++LG R N +T++ ++D L K G++ +
Sbjct: 237 RGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMED 296

Query: 282 ANGLLELMIQRGLNPDRFTYNSLMDGY--------------------------------- 308
           A  +L  M   G  PD  TYN+L+DG+                                 
Sbjct: 297 AVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCH 356

Query: 309 --CLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGV-R 365
             C  GR D A EI   M ++GC    ++Y+ +++G CK   V EA+  + ++  + V  
Sbjct: 357 GLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVA 416

Query: 366 QTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKL 425
             VI Y+ L+ GL +AG+   A +  + M      PD+ T++ILI+GLC    +   ++L
Sbjct: 417 PHVIAYSALIDGLCKAGKIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLEL 476

Query: 426 FHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCR 485
           F  +        +  +  L+D LC+A R+D A++LF ++   GL P   T   MIHGL  
Sbjct: 477 FRGMAERGCVPDMVTYATLVDRLCRASRVDEAFDLFQQMRSDGLSPDRSTRRTMIHGLLE 536

Query: 486 KGKLEKAN 493
             + E A 
Sbjct: 537 VNRDEDAK 544



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 97/322 (30%), Positives = 171/322 (53%), Gaps = 14/322 (4%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
           P + +++ L   ++K    D  +    K+V +G   + +T + +++       GL    R
Sbjct: 241 PNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVD-------GLLKVGR 293

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
           +++A  + + M   G  PD +TY TLI+GF +   L  A+ L ++M+   +        +
Sbjct: 294 MEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFH------PS 347

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
           + +Y+ +   LC+ G  D+A E+   M  RG  P  +  ++++ G C AG   E  G F 
Sbjct: 348 VVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFE 407

Query: 253 EML-DLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
           +M  D    P+++ ++ +ID LCK GKI+EA   LE MI+ G  PD  T++ L++G C  
Sbjct: 408 KMARDEVVAPHVIAYSALIDGLCKAGKIDEAYEFLERMIRAGRIPDVVTFSILINGLCDA 467

Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
           GRIDT  E+F  M  +GC   +V+Y  L++  C+   V+EA  L++Q+ S+G+     T 
Sbjct: 468 GRIDTGLELFRGMAERGCVPDMVTYATLVDRLCRASRVDEAFDLFQQMRSDGLSPDRSTR 527

Query: 372 NTLLSGLFQAGQAGYAQKLFDE 393
            T++ GL +  +   A+++ DE
Sbjct: 528 RTMIHGLLEVNRDEDAKRIQDE 549



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 71/239 (29%), Positives = 130/239 (54%), Gaps = 2/239 (0%)

Query: 339 LINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYN 398
           +I+G CK   V++A++L++Q++   +   V+TY  L+ GL +  +   A  LF+E +   
Sbjct: 1   MIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKG 60

Query: 399 VEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMN-KFEFGIEIFNCLIDGLCKAGRLDNA 457
             P + TYN +IDGLCK   ++ A+ L+  + ++  F   +  ++ LIDGLC+   +D  
Sbjct: 61  CHPTVVTYNTMIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKG 120

Query: 458 WELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHG 517
            +L  ++  +G  P  VTY+ +++ L  +G+ ++A   L  M  NGC P ++TF  ++ G
Sbjct: 121 CKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIKG 180

Query: 518 FLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKSSY-RAC 575
             +  +      ++ +M   E  L PD  TF+ V+D L K+++  +   V K +  R C
Sbjct: 181 LCKEGEIEAAFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGC 239


>gi|414591648|tpg|DAA42219.1| TPA: PPR-814b [Zea mays]
          Length = 827

 Score =  284 bits (727), Expect = 8e-74,   Method: Compositional matrix adjust.
 Identities = 174/545 (31%), Positives = 283/545 (51%), Gaps = 42/545 (7%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
           N  +H  CK+  ++  EA  F   M + +  P   ++N L    +    +   +  ++++
Sbjct: 271 NSVVHALCKARAMDKAEA--FLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEM 328

Query: 102 VSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLING 161
               +LPD +TL++L+         LC   +IKEA  +F  M   G  PDV +Y  ++NG
Sbjct: 329 RRHSILPDVVTLSMLMG-------SLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNG 381

Query: 162 FCRTGNLSVALRLHKKMVSGD---------------YEN-GLISKT-------------- 191
           +   G L     L   M+ GD               Y N G++ K               
Sbjct: 382 YATKGCLVDMTDLFDLML-GDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKP 440

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
           ++ +Y  +I +LC+ G +D A E F +M  +G+ P       LI GFC  G+  +   L 
Sbjct: 441 DVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELI 500

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
            E+++ G   +++ F+ +I+ LCK G++ +A  + +L +  GL+PD   Y+ LMDGYCLV
Sbjct: 501 SEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLV 560

Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
           G+++ A  +F +M S G +  VV Y  L+NGYCKI  ++E +SL+R+++  G++ + I Y
Sbjct: 561 GKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILY 620

Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
           + ++ GLFQAG+   A+  F EM    +  D+ TYNI++ GL KN C  EA+ LF  L  
Sbjct: 621 SIIIDGLFQAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRA 680

Query: 432 NKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEK 491
              +  I   N +IDG+ +  R++ A +LF  + +  LVP VVTYSIMI  L ++G +E+
Sbjct: 681 MNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPNVVTYSIMITNLIKEGLVEE 740

Query: 492 ANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIV 551
           A D    M+  GC PN    N ++   L+ N+  +    L K+   ERN   +  T  ++
Sbjct: 741 AEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRAGAYLSKI--DERNFSLEHLTAMLL 798

Query: 552 VDLLA 556
           VDL +
Sbjct: 799 VDLFS 803



 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 148/518 (28%), Positives = 244/518 (47%), Gaps = 49/518 (9%)

Query: 72  SPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVEN 131
           SP   ++ +L     +    +  ++F+ +L+  GL  + +  N L+        G C   
Sbjct: 121 SPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLE-------GFCEAK 173

Query: 132 RIKEA-TWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISK 190
           R  EA   L       G  PDV +Y  L+   C  G    A  L + M  G    G +  
Sbjct: 174 RTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEG----GAVCS 229

Query: 191 TNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCA--------- 241
            N+ +Y+ +ID   KEG V+KA +LF EM  RGI P +V   +++H  C A         
Sbjct: 230 PNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAF 289

Query: 242 --------------------------GNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCK 275
                                     G W+E   +F EM      P+++T ++++  LCK
Sbjct: 290 LRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCK 349

Query: 276 GGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVS 335
            GKI EA  + + M  +G NPD F+YN +++GY   G +    ++F  M   G      +
Sbjct: 350 YGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYT 409

Query: 336 YNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMK 395
           +N+LI  Y     +++AM ++ ++  +GV+  V+TY T+++ L + G+   A + F++M 
Sbjct: 410 FNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMI 469

Query: 396 LYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLD 455
              V PD   YN LI G C +  + +A +L   +  N     I  F+ +I+ LCK GR+ 
Sbjct: 470 DQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVM 529

Query: 456 NAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLM 515
           +A  +F      GL P  V YS+++ G C  GK+EKA      M   G  PNVV + TL+
Sbjct: 530 DAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLV 589

Query: 516 HGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
           +G+ +  +  + + L  +M   +R + P    +SI++D
Sbjct: 590 NGYCKIGRIDEGLSLFREML--QRGIKPSTILYSIIID 625



 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 143/531 (26%), Positives = 260/531 (48%), Gaps = 26/531 (4%)

Query: 33  AVSSPE-----TQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAK 87
           AV SP      T ++ F  E       ++N+A   F  M      P + ++N +  A+ K
Sbjct: 226 AVCSPNVVAYNTVIDGFFKEG------DVNKACDLFKEMVQRGIPPDLVTYNSVVHALCK 279

Query: 88  NRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFG 147
            R  D   +F R++V+  +LP+  T N LI  +G    G     + KEA  +FK M    
Sbjct: 280 ARAMDKAEAFLRQMVNKRVLPNNWTYNNLI--YGYSSTG-----QWKEAVRVFKEMRRHS 332

Query: 148 VRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEG 207
           + PDV+T   L+   C+ G +  A  +   M             ++FSY+I+++    +G
Sbjct: 333 ILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKG------QNPDVFSYNIMLNGYATKG 386

Query: 208 LVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFN 267
            +    +LF  M G GI P       LI  +   G  ++   +F EM D G +P+++T+ 
Sbjct: 387 CLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYR 446

Query: 268 VMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSK 327
            +I  LC+ GK+++A      MI +G+ PD++ YN L+ G+C  G +  A+E+   + + 
Sbjct: 447 TVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNN 506

Query: 328 GCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYA 387
           G    +V ++ +IN  CK+  V +A +++   ++ G+    + Y+ L+ G    G+   A
Sbjct: 507 GMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKA 566

Query: 388 QKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDG 447
            ++FD M    +EP++  Y  L++G CK   + E + LF  +     +    +++ +IDG
Sbjct: 567 LRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDG 626

Query: 448 LCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPN 507
           L +AGR   A   FH++ + G+   + TY+I++ GL +    ++A      +       N
Sbjct: 627 LFQAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKIN 686

Query: 508 VVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKD 558
           ++T NT++ G  Q  +  +  +L   ++     LVP+  T+SI++  L K+
Sbjct: 687 IITLNTMIDGMFQTRRVEEAKDLFASISRSR--LVPNVVTYSIMITNLIKE 735



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 86/319 (26%), Positives = 148/319 (46%), Gaps = 14/319 (4%)

Query: 258 GPR---PNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRI 314
           GPR   P   T+ +++DC  +  +   A      +++ GL  +    N L++G+C   R 
Sbjct: 116 GPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRT 175

Query: 315 DTAREIFLSMHSK-GCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGV--RQTVITY 371
           D A +I L    + GC   V SY+IL+   C      +A  L R +   G      V+ Y
Sbjct: 176 DEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAY 235

Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
           NT++ G F+ G    A  LF EM    + PDL TYN ++  LCK   + +A      +  
Sbjct: 236 NTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVN 295

Query: 432 NKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEK 491
            +       +N LI G    G+   A  +F ++ +  ++P VVT S+++  LC+ GK+++
Sbjct: 296 KRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKE 355

Query: 492 ANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIV 551
           A D    M   G  P+V ++N +++G+        + +L   M      + PD  TF+++
Sbjct: 356 ARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGD--GIAPDFYTFNVL 413

Query: 552 VDLLAKDEKYHECSAVSKS 570
           +      + Y  C  + K+
Sbjct: 414 I------KAYANCGMLDKA 426


>gi|224713524|gb|ACN62069.1| PPR-814c [Zea mays]
          Length = 814

 Score =  284 bits (726), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 174/545 (31%), Positives = 284/545 (52%), Gaps = 42/545 (7%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
           N  +H  CK+  ++  EA  F   M + +  P   ++N L    +    +   +  ++++
Sbjct: 258 NSVVHALCKARAMDKAEA--FLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEM 315

Query: 102 VSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLING 161
               +LPD +TL++L+         LC   +IKEA  +F  M   G  PDV +Y  ++NG
Sbjct: 316 RRHSILPDVVTLSMLMG-------SLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNG 368

Query: 162 FCRTGNLSVALRLHKKMVSGD---------------YEN-GLISKT-------------- 191
           +   G L     L   M+ GD               Y N G++ K               
Sbjct: 369 YATKGCLVDMTDLFDLML-GDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKP 427

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
           ++ +Y  +I +LC+ G +D A E F +M  +G+ P       LI GFC  G+  +   L 
Sbjct: 428 DVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELI 487

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
            E+++ G   +++ F+ +I+ LCK G++ +A  + +L +  GL+PD   Y+ LMDGYCLV
Sbjct: 488 SEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLV 547

Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
           G+++ A  +F +M S G +  VV Y  L+NGYCKI  ++E +SL+R+++  G++ + I Y
Sbjct: 548 GKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILY 607

Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
           + ++ GLFQAG+   A+  F EM    +  D+ TYNI++ GL KN C  EA+ LF  L  
Sbjct: 608 SIIIDGLFQAGRTVPAKVKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRA 667

Query: 432 NKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEK 491
              +  I   N +IDG+ +  R++ A +LF  + +  LVP+VVTYSIMI  L ++G +E+
Sbjct: 668 MNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEE 727

Query: 492 ANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIV 551
           A D    M+  GC PN    N ++   L+ N+  +    L K+   ERN   +  T  ++
Sbjct: 728 AEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRAGAYLSKI--DERNFSLEHLTTMLL 785

Query: 552 VDLLA 556
           VDL +
Sbjct: 786 VDLFS 790



 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 148/518 (28%), Positives = 244/518 (47%), Gaps = 49/518 (9%)

Query: 72  SPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVEN 131
           SP   ++ +L     +    +  ++F+ +L+  GL  + +  N L+        G C   
Sbjct: 108 SPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLE-------GFCEAK 160

Query: 132 RIKEA-TWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISK 190
           R  EA   L       G  PDV +Y  L+   C  G    A  L + M  G    G +  
Sbjct: 161 RTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEG----GAVCS 216

Query: 191 TNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCA--------- 241
            N+ +Y+ +ID   KEG V+KA +LF EM  RGI P +V   +++H  C A         
Sbjct: 217 PNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAF 276

Query: 242 --------------------------GNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCK 275
                                     G W+E   +F EM      P+++T ++++  LCK
Sbjct: 277 LRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCK 336

Query: 276 GGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVS 335
            GKI EA  + + M  +G NPD F+YN +++GY   G +    ++F  M   G      +
Sbjct: 337 YGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYT 396

Query: 336 YNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMK 395
           +N+LI  Y     +++AM ++ ++  +GV+  V+TY T+++ L + G+   A + F++M 
Sbjct: 397 FNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMI 456

Query: 396 LYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLD 455
              V PD   YN LI G C +  + +A +L   +  N     I  F+ +I+ LCK GR+ 
Sbjct: 457 DQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVM 516

Query: 456 NAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLM 515
           +A  +F      GL P  V YS+++ G C  GK+EKA      M   G  PNVV + TL+
Sbjct: 517 DAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLV 576

Query: 516 HGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
           +G+ +  +  + + L  +M   +R + P    +SI++D
Sbjct: 577 NGYCKIGRIDEGLSLFREML--QRGIKPSTILYSIIID 612



 Score =  218 bits (556), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 143/531 (26%), Positives = 259/531 (48%), Gaps = 26/531 (4%)

Query: 33  AVSSPE-----TQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAK 87
           AV SP      T ++ F  E       ++N+A   F  M      P + ++N +  A+ K
Sbjct: 213 AVCSPNVVAYNTVIDGFFKEG------DVNKACDLFKEMVQRGIPPDLVTYNSVVHALCK 266

Query: 88  NRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFG 147
            R  D   +F R++V+  +LP+  T N LI  +G    G     + KEA  +FK M    
Sbjct: 267 ARAMDKAEAFLRQMVNKRVLPNNWTYNNLI--YGYSSTG-----QWKEAVRVFKEMRRHS 319

Query: 148 VRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEG 207
           + PDV+T   L+   C+ G +  A  +   M             ++FSY+I+++    +G
Sbjct: 320 ILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKG------QNPDVFSYNIMLNGYATKG 373

Query: 208 LVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFN 267
            +    +LF  M G GI P       LI  +   G  ++   +F EM D G +P+++T+ 
Sbjct: 374 CLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYR 433

Query: 268 VMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSK 327
            +I  LC+ GK+++A      MI +G+ PD++ YN L+ G+C  G +  A+E+   + + 
Sbjct: 434 TVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNN 493

Query: 328 GCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYA 387
           G    +V ++ +IN  CK+  V +A +++   ++ G+    + Y+ L+ G    G+   A
Sbjct: 494 GMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKA 553

Query: 388 QKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDG 447
            ++FD M    +EP++  Y  L++G CK   + E + LF  +     +    +++ +IDG
Sbjct: 554 LRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDG 613

Query: 448 LCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPN 507
           L +AGR   A   FH++ + G+   + TY+I++ GL +    ++A      +       N
Sbjct: 614 LFQAGRTVPAKVKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKIN 673

Query: 508 VVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKD 558
           ++T NT++ G  Q  +  +  +L   ++     LVP   T+SI++  L K+
Sbjct: 674 IITLNTMIDGMFQTRRVEEAKDLFASISRSR--LVPSVVTYSIMITNLIKE 722



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 86/319 (26%), Positives = 148/319 (46%), Gaps = 14/319 (4%)

Query: 258 GPR---PNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRI 314
           GPR   P   T+ +++DC  +  +   A      +++ GL  +    N L++G+C   R 
Sbjct: 103 GPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRT 162

Query: 315 DTAREIFLSMHSK-GCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGV--RQTVITY 371
           D A +I L    + GC   V SY+IL+   C      +A  L R +   G      V+ Y
Sbjct: 163 DEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAY 222

Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
           NT++ G F+ G    A  LF EM    + PDL TYN ++  LCK   + +A      +  
Sbjct: 223 NTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVN 282

Query: 432 NKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEK 491
            +       +N LI G    G+   A  +F ++ +  ++P VVT S+++  LC+ GK+++
Sbjct: 283 KRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKE 342

Query: 492 ANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIV 551
           A D    M   G  P+V ++N +++G+        + +L   M      + PD  TF+++
Sbjct: 343 ARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGD--GIAPDFYTFNVL 400

Query: 552 VDLLAKDEKYHECSAVSKS 570
           +      + Y  C  + K+
Sbjct: 401 I------KAYANCGMLDKA 413


>gi|357499971|ref|XP_003620274.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495289|gb|AES76492.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 498

 Score =  284 bits (726), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 163/463 (35%), Positives = 253/463 (54%), Gaps = 35/463 (7%)

Query: 63  FGYMTHMQ-PSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFG 121
           F  + H + P+PPI  F  + G++ K   Y   IS +R++   G+  + +TLNILINCF 
Sbjct: 47  FNRLLHQKNPTPPIFEFGKILGSLVKINCYHTAISLHRQMELKGIASNLVTLNILINCFS 106

Query: 122 NKERGLCVENRIKEATWLFKNMIAFGVRPDVIT-------------YGTLINGFCRTGNL 168
              +          +  +F N++  G  P+VIT             YGTLING C+ G  
Sbjct: 107 QLGQN-------PLSFSVFANILKKGYDPNVITLTTLIKGLCLKVSYGTLINGLCKVGQA 159

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
             AL+L +++      +G + + N+  Y+ IIDS+CK  LV++A +L+ EM   GI+P V
Sbjct: 160 RAALQLLRRV------DGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSEGISPDV 213

Query: 229 VVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLEL 288
           V  + LI GF   G  ++   LF +M+    +P++ TFN+++D  CK GK+ E   +  +
Sbjct: 214 VTYSALISGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAM 273

Query: 289 MIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILN 348
           M+++G+ P+  TY SLMDGYCLV +++ A  IF +M   G      SYNI+ING+CKI  
Sbjct: 274 MMKQGIKPNVVTYCSLMDGYCLVKQVNKANSIFNTMAQGGVNPDTQSYNIMINGFCKIKK 333

Query: 349 VEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNI 408
           V+EAM+L++++    +   V+TY +L+ GL ++G+  YA KL DEM    V PD+ TY+ 
Sbjct: 334 VDEAMNLFKKMHCKNIIPNVVTYTSLIDGLCKSGKISYALKLVDEMHDRGVPPDIITYSS 393

Query: 409 LIDGLCKNNCVQEAVKLFHMLEMNKFE--------FGIEIFNCLIDGLCKAGRLDNAWEL 460
           ++D LCKN+ V +A+ L   L+   FE          +  +  +I G C  G  + A  L
Sbjct: 394 ILDALCKNHQVDKAIALLTKLKDQVFEDLFVKGYNLDVYAYTVMIQGFCVKGLFNEALAL 453

Query: 461 FHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNG 503
             K+   G +P   TY I+I  L +K + + A   L  M   G
Sbjct: 454 LSKMEDNGRIPDAKTYEIIILSLFKKDENDMAEKLLREMIARG 496



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 112/375 (29%), Positives = 194/375 (51%), Gaps = 24/375 (6%)

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
           IF +  I+ SL K      A  L  +M+ +GI   +V    LI+ F   G       +F 
Sbjct: 60  IFEFGKILGSLVKINCYHTAISLHRQMELKGIASNLVTLNILINCFSQLGQNPLSFSVFA 119

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
            +L  G  PN++T   +I  LC                       + +Y +L++G C VG
Sbjct: 120 NILKKGYDPNVITLTTLIKGLCL----------------------KVSYGTLINGLCKVG 157

Query: 313 RIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYN 372
           +   A ++   +  K  +  VV YN +I+  CK+  V EA  LY +++S G+   V+TY+
Sbjct: 158 QARAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSEGISPDVVTYS 217

Query: 373 TLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMN 432
            L+SG F  G+   A  LF++M L N++PD+ T+NIL+DG CK+  ++E   +F M+   
Sbjct: 218 ALISGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQ 277

Query: 433 KFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKA 492
             +  +  +  L+DG C   +++ A  +F+ + Q G+ P   +Y+IMI+G C+  K+++A
Sbjct: 278 GIKPNVVTYCSLMDGYCLVKQVNKANSIFNTMAQGGVNPDTQSYNIMINGFCKIKKVDEA 337

Query: 493 NDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVV 552
            +    M      PNVVT+ +L+ G  ++ K S  ++L+ +M   +R + PD  T+S ++
Sbjct: 338 MNLFKKMHCKNIIPNVVTYTSLIDGLCKSGKISYALKLVDEMH--DRGVPPDIITYSSIL 395

Query: 553 DLLAKDEKYHECSAV 567
           D L K+ +  +  A+
Sbjct: 396 DALCKNHQVDKAIAL 410



 Score =  135 bits (340), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 93/331 (28%), Positives = 159/331 (48%), Gaps = 23/331 (6%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
           N  +   CK  ++N  EA   +  M     SP + +++ L             I  + K+
Sbjct: 182 NTIIDSMCKVKLVN--EAFDLYSEMVSEGISPDVVTYSALISGFFIVGKLKDAIDLFNKM 239

Query: 102 VSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLING 161
           +   + PD  T NIL++       G C + ++KE   +F  M+  G++P+V+TY +L++G
Sbjct: 240 ILENIKPDVYTFNILVD-------GFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDG 292

Query: 162 FCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKG 221
           +C    ++ A  +   M  G    G+   T   SY+I+I+  CK   VD+A  LF +M  
Sbjct: 293 YCLVKQVNKANSIFNTMAQG----GVNPDTQ--SYNIMINGFCKIKKVDEAMNLFKKMHC 346

Query: 222 RGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINE 281
           + I P VV  T+LI G C +G       L  EM D G  P+++T++ ++D LCK  ++++
Sbjct: 347 KNIIPNVVTYTSLIDGLCKSGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDK 406

Query: 282 ANGLL--------ELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTV 333
           A  LL        E +  +G N D + Y  ++ G+C+ G  + A  +   M   G     
Sbjct: 407 AIALLTKLKDQVFEDLFVKGYNLDVYAYTVMIQGFCVKGLFNEALALLSKMEDNGRIPDA 466

Query: 334 VSYNILINGYCKILNVEEAMSLYRQIISNGV 364
            +Y I+I    K    + A  L R++I+ G+
Sbjct: 467 KTYEIIILSLFKKDENDMAEKLLREMIARGL 497



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 82/304 (26%), Positives = 146/304 (48%), Gaps = 15/304 (4%)

Query: 273 LCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHT 332
           + K  + N  +    L+ Q+   P  F +  ++     +    TA  +   M  KG    
Sbjct: 35  IIKNDEHNLVSSFNRLLHQKNPTPPIFEFGKILGSLVKINCYHTAISLHRQMELKGIASN 94

Query: 333 VVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNT-------------LLSGLF 379
           +V+ NILIN + ++     + S++  I+  G    VIT  T             L++GL 
Sbjct: 95  LVTLNILINCFSQLGQNPLSFSVFANILKKGYDPNVITLTTLIKGLCLKVSYGTLINGLC 154

Query: 380 QAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIE 439
           + GQA  A +L   +    V+P++  YN +ID +CK   V EA  L+  +        + 
Sbjct: 155 KVGQARAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSEGISPDVV 214

Query: 440 IFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYM 499
            ++ LI G    G+L +A +LF+K+  + + P V T++I++ G C+ GK+++       M
Sbjct: 215 TYSALISGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMM 274

Query: 500 EKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDE 559
            K G  PNVVT+ +LM G+    + +K   + + MA+   N  PD  +++I+++   K +
Sbjct: 275 MKQGIKPNVVTYCSLMDGYCLVKQVNKANSIFNTMAQGGVN--PDTQSYNIMINGFCKIK 332

Query: 560 KYHE 563
           K  E
Sbjct: 333 KVDE 336


>gi|302780401|ref|XP_002971975.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
 gi|300160274|gb|EFJ26892.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
          Length = 755

 Score =  284 bits (726), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 174/553 (31%), Positives = 271/553 (49%), Gaps = 82/553 (14%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYR--------- 99
           CKSG  +L++A      M    P P  + +N +  A+ K R+    + ++R         
Sbjct: 70  CKSG--DLDKACELLEEMRESGPVPDAAIYNFVIHALCKARNTAKALDYFRSMECEKNVI 127

Query: 100 -----------------------KLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEA 136
                                  K+   G +P+  T N+LIN       G C  +++  A
Sbjct: 128 TWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLIN-------GFCKVHKVHRA 180

Query: 137 TWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSY 196
             L K M   G+ P+V+TY T+I+GFCR   +  A +L ++MV    ENG +   N+ +Y
Sbjct: 181 YLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMV----ENGCMP--NLVTY 234

Query: 197 SIIIDSLCKEGLVDKAKELFLEMKGRGIN------------------------------- 225
           + ++  LC+ GL+D+A EL  EM+ RG+                                
Sbjct: 235 NTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSN 294

Query: 226 ----PAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINE 281
               P VV  +TLI G C AG  +E   LF +M +    P+++TF  ++D LCKG ++ E
Sbjct: 295 GDCPPDVVAYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQE 354

Query: 282 ANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILIN 341
           A  +LE M  R   P+  TY+SL+DG C  G++  A+E+F  M  +G +  VV+YN LI+
Sbjct: 355 AQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIH 414

Query: 342 GYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEP 401
           G+C    V+ A+ L  ++ + G    +ITYNTL+ GL + G+A  A +LF +MK     P
Sbjct: 415 GFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNP 474

Query: 402 DLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELF 461
           D+ TY+ LI G CK   +  A  LF  +        +  F+ L++G C AG +D+A  L 
Sbjct: 475 DVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLL 534

Query: 462 HKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQN 521
            ++      P V TY+ ++ G C+ G++ +A   L  M K GC PNVVT+  L+  F + 
Sbjct: 535 EEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRA 594

Query: 522 NKTSKVVELLHKM 534
            K +    LL +M
Sbjct: 595 GKPTVAYRLLEEM 607



 Score =  283 bits (724), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 164/542 (30%), Positives = 282/542 (52%), Gaps = 23/542 (4%)

Query: 20  KLSSLFKSPRQIAAVSSPETQLNEF-LHENCKSGIINLNEARYFFGYMTHMQPSPPISSF 78
           K   L +  R+   V  P+  +  F +H  CK+     N A+    Y   M+    + ++
Sbjct: 77  KACELLEEMRESGPV--PDAAIYNFVIHALCKA----RNTAKAL-DYFRSMECEKNVITW 129

Query: 79  NLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATW 138
            ++   + K        +++ K+   G +P+  T N+LIN       G C  +++  A  
Sbjct: 130 TIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLIN-------GFCKVHKVHRAYL 182

Query: 139 LFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSI 198
           L K M   G+ P+V+TY T+I+GFCR   +  A +L ++MV    ENG +   N+ +Y+ 
Sbjct: 183 LLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMV----ENGCMP--NLVTYNT 236

Query: 199 IIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLG 258
           ++  LC+ GL+D+A EL  EM+ RG+ P      TL+ G C  G  +    +F +  +  
Sbjct: 237 LLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGD 296

Query: 259 PRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAR 318
             P+++ ++ +I  LCK G+++EA  L E M +    PD  T+ +LMDG C   R+  A+
Sbjct: 297 CPPDVVAYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQ 356

Query: 319 EIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGL 378
           ++  +M  + C   V++Y+ LI+G CK   V +A  +++++I  G+   V+TYN+L+ G 
Sbjct: 357 QVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGF 416

Query: 379 FQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGI 438
                   A  L +EM      PD+ TYN LIDGLCK     EA +LF  ++       +
Sbjct: 417 CMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDV 476

Query: 439 EIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLY 498
             ++CLI G CK  R+D A  LF  + ++ ++P VVT+S ++ G C  G ++ A   L  
Sbjct: 477 ITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEE 536

Query: 499 MEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKD 558
           M  + C+P+V T+ +L+ GF +  +  +   +L +MA  +R   P+  T++ ++D   + 
Sbjct: 537 MVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMA--KRGCQPNVVTYTALIDAFCRA 594

Query: 559 EK 560
            K
Sbjct: 595 GK 596



 Score =  274 bits (701), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 164/593 (27%), Positives = 293/593 (49%), Gaps = 23/593 (3%)

Query: 20  KLSSLFKSPRQIAAVSSPETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPS---PPIS 76
           K + L ++    A +    T  NE+ +    +G   +++    +  +  M+ S   P + 
Sbjct: 138 KANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLAPNVV 197

Query: 77  SFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEA 136
           +++ +     +    D     +R++V  G +P+ +T N L++       GLC    + EA
Sbjct: 198 TYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLS-------GLCRNGLMDEA 250

Query: 137 TWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSY 196
             L   M   G++PD  +Y TL+ G C+TG + +AL++ +   +GD         ++ +Y
Sbjct: 251 YELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGD------CPPDVVAY 304

Query: 197 SIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLD 256
           S +I  LCK G +D+A +LF +M+     P VV  T L+ G C     +E   +   M D
Sbjct: 305 STLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMED 364

Query: 257 LGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDT 316
               PN++T++ +ID LCK G++ +A  + + MI RG+ P+  TYNSL+ G+C+   +D+
Sbjct: 365 RNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDS 424

Query: 317 AREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLS 376
           A  +   M + GC   +++YN LI+G CK     EA  L+  + +      VITY+ L+ 
Sbjct: 425 ALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIG 484

Query: 377 GLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEF 436
           G  +  +   A+ LFD+M    V PD+ T++ L++G C    V +A +L   +  +    
Sbjct: 485 GFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSP 544

Query: 437 GIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFL 496
            +  +  L+DG CK GR+  A  +  ++ ++G  P VVTY+ +I   CR GK   A   L
Sbjct: 545 DVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYRLL 604

Query: 497 LYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLA 556
             M  NG  PNV+T+ +L+ GF       +  ++L ++ E + N   D   + +++D L 
Sbjct: 605 EEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKILERL-ERDENCKADMFAYRVMMDGLC 663

Query: 557 KDEKYH------ECSAVSKSSYRACLYVTIFQPSSLGSMIGCTVRLMPQPEMS 603
           +  +        E    S +  R  +YV + +    G  +G  + ++ +  +S
Sbjct: 664 RTGRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLS 716



 Score =  263 bits (671), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 158/527 (29%), Positives = 267/527 (50%), Gaps = 42/527 (7%)

Query: 57  NEARYFFGYMTHMQP-SPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNI 115
           + A  FF + +  Q     + ++N LF A+ + R  D      +     G+ P+  T  +
Sbjct: 5   DAALRFFHWASKQQGFDHNVYTYNRLFEALLRARRIDETCHILKNGWPPGITPNVFTYAV 64

Query: 116 LINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLH 175
           +I       +GLC    + +A  L + M   G  PD   Y  +I+  C+  N + AL   
Sbjct: 65  VI-------QGLCKSGDLDKACELLEEMRESGPVPDAAIYNFVIHALCKARNTAKALDYF 117

Query: 176 KKMVSGDYENGLISKT-----------------------------NIFSYSIIIDSLCKE 206
           + M   + E  +I+ T                             N ++Y+++I+  CK 
Sbjct: 118 RSM---ECEKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKV 174

Query: 207 GLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTF 266
             V +A  L  EMK  G+ P VV  +T+IHGFC     +    LF +M++ G  PNL+T+
Sbjct: 175 HKVHRAYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTY 234

Query: 267 NVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHS 326
           N ++  LC+ G ++EA  LL+ M +RGL PD+F+Y++LM G C  G+ID A ++F    +
Sbjct: 235 NTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSN 294

Query: 327 KGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGY 386
             C   VV+Y+ LI G CK   ++EA  L+ ++  N     V+T+  L+ GL +  +   
Sbjct: 295 GDCPPDVVAYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQE 354

Query: 387 AQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLID 446
           AQ++ + M+  N  P++ TY+ LIDGLCK   V++A ++F  + +   E  +  +N LI 
Sbjct: 355 AQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIH 414

Query: 447 GLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAP 506
           G C    +D+A  L  ++   G +P ++TY+ +I GLC+ G+  +AN     M+   C P
Sbjct: 415 GFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNP 474

Query: 507 NVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
           +V+T++ L+ GF +  +      L   M   ++ ++PD  TFS +V+
Sbjct: 475 DVITYSCLIGGFCKLERIDMARTLFDDML--KQAVLPDVVTFSTLVE 519



 Score =  252 bits (643), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 145/432 (33%), Positives = 230/432 (53%), Gaps = 11/432 (2%)

Query: 132 RIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKT 191
           RI E   + KN    G+ P+V TY  +I G C++G+L  A  L ++M     E+G +   
Sbjct: 39  RIDETCHILKNGWPPGITPNVFTYAVVIQGLCKSGDLDKACELLEEM----RESGPVPDA 94

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
            I  Y+ +I +LCK     KA + F  M+       V+  T +I G C A    E    F
Sbjct: 95  AI--YNFVIHALCKARNTAKALDYFRSME---CEKNVITWTIMIDGLCKANRLPEATTYF 149

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
            +M   G  PN  T+NV+I+  CK  K++ A  LL+ M + GL P+  TY++++ G+C  
Sbjct: 150 AKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLAPNVVTYSTVIHGFCRQ 209

Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
            ++DTA ++F  M   GC   +V+YN L++G C+   ++EA  L  ++   G++    +Y
Sbjct: 210 TKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSY 269

Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
           +TL++GL + G+   A K+F++    +  PD+  Y+ LI GLCK   + EA KLF  +  
Sbjct: 270 DTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKAGRLDEACKLFEKMRE 329

Query: 432 NKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEK 491
           N  E  +  F  L+DGLCK  RL  A ++   +  +   P V+TYS +I GLC+ G++  
Sbjct: 330 NSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRD 389

Query: 492 ANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIV 551
           A +    M   G  PNVVT+N+L+HGF   N     + L+ +M       +PD  T++ +
Sbjct: 390 AQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTAT--GCLPDIITYNTL 447

Query: 552 VDLLAKDEKYHE 563
           +D L K  +  E
Sbjct: 448 IDGLCKTGRAPE 459



 Score =  242 bits (617), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 139/447 (31%), Positives = 232/447 (51%), Gaps = 17/447 (3%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CK+G   L+EA   F  M      P + +F  L   + K             +      P
Sbjct: 312 CKAG--RLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTP 369

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           + +T + LI+       GLC   ++++A  +FK MI  G+ P+V+TY +LI+GFC T  +
Sbjct: 370 NVITYSSLID-------GLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGV 422

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
             AL L ++M +     G +   +I +Y+ +ID LCK G   +A  LF +MK +  NP V
Sbjct: 423 DSALLLMEEMTA----TGCLP--DIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDV 476

Query: 229 VVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLEL 288
           +  + LI GFC     +    LF +ML     P+++TF+ +++  C  G +++A  LLE 
Sbjct: 477 ITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEE 536

Query: 289 MIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILN 348
           M+    +PD +TY SL+DG+C VGR+  AR +   M  +GC+  VV+Y  LI+ +C+   
Sbjct: 537 MVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGK 596

Query: 349 VEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEM-KLYNVEPDLSTYN 407
              A  L  +++ NGV+  VITY +L+ G    G    A+K+ + + +  N + D+  Y 
Sbjct: 597 PTVAYRLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKILERLERDENCKADMFAYR 656

Query: 408 ILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLP-Q 466
           +++DGLC+   +  A++L   ++ +      +I+  LI GLC+   L  A E+  ++   
Sbjct: 657 VMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLS 716

Query: 467 KGLVPTVVTYSIMIHGLCRKGKLEKAN 493
           +   P    Y  +I  L R+G+ E+AN
Sbjct: 717 RKSRPNAEAYEAVIQELAREGRHEEAN 743



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 92/341 (26%), Positives = 162/341 (47%), Gaps = 40/341 (11%)

Query: 262 NLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIF 321
           N+ T+N + + L +  +I+E   +L+     G+ P+ FTY  ++ G C  G +D A E+ 
Sbjct: 23  NVYTYNRLFEALLRARRIDETCHILKNGWPPGITPNVFTYAVVIQGLCKSGDLDKACELL 82

Query: 322 LSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQA 381
             M   G       YN +I+  CK  N  +A+  +R   S    + VIT+  ++ GL +A
Sbjct: 83  EEMRESGPVPDAAIYNFVIHALCKARNTAKALDYFR---SMECEKNVITWTIMIDGLCKA 139

Query: 382 GQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIF 441
            +   A   F +MK     P+  TYN+LI+G CK + V  A  L   ++ +     +  +
Sbjct: 140 NRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLAPNVVTY 199

Query: 442 NCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEK 501
           + +I G C+  ++D A++LF ++ + G +P +VTY+ ++ GLCR G +++A + L  M +
Sbjct: 200 STVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRE 259

Query: 502 NG-----------------------------------CAPNVVTFNTLMHGFLQNNKTSK 526
            G                                   C P+VV ++TL+ G  +  +  +
Sbjct: 260 RGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKAGRLDE 319

Query: 527 VVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAV 567
             +L  KM   E +  PD  TF+ ++D L K ++  E   V
Sbjct: 320 ACKLFEKMR--ENSCEPDVVTFTALMDGLCKGDRLQEAQQV 358



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 88/270 (32%), Positives = 138/270 (51%), Gaps = 5/270 (1%)

Query: 291 QRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVE 350
           Q+G + + +TYN L +      RID    I  +    G    V +Y ++I G CK  +++
Sbjct: 17  QQGFDHNVYTYNRLFEALLRARRIDETCHILKNGWPPGITPNVFTYAVVIQGLCKSGDLD 76

Query: 351 EAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILI 410
           +A  L  ++  +G       YN ++  L +A     A   F  M+    E ++ T+ I+I
Sbjct: 77  KACELLEEMRESGPVPDAAIYNFVIHALCKARNTAKALDYFRSME---CEKNVITWTIMI 133

Query: 411 DGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLV 470
           DGLCK N + EA   F  ++          +N LI+G CK  ++  A+ L  ++ + GL 
Sbjct: 134 DGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLA 193

Query: 471 PTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVEL 530
           P VVTYS +IHG CR+ K++ A      M +NGC PN+VT+NTL+ G  +N    +  EL
Sbjct: 194 PNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYEL 253

Query: 531 LHKMAEPERNLVPDDTTFSIVVDLLAKDEK 560
           L +M   ER L PD  ++  ++  L K  K
Sbjct: 254 LDEMR--ERGLQPDKFSYDTLMAGLCKTGK 281



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 79/253 (31%), Positives = 129/253 (50%), Gaps = 10/253 (3%)

Query: 315 DTAREIF-LSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNT 373
           D A   F  +   +G  H V +YN L     +   ++E   + +     G+   V TY  
Sbjct: 5   DAALRFFHWASKQQGFDHNVYTYNRLFEALLRARRIDETCHILKNGWPPGITPNVFTYAV 64

Query: 374 LLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNK 433
           ++ GL ++G    A +L +EM+     PD + YN +I  LCK     +A+  F  +E  K
Sbjct: 65  VIQGLCKSGDLDKACELLEEMRESGPVPDAAIYNFVIHALCKARNTAKALDYFRSMECEK 124

Query: 434 FEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKAN 493
               +  +  +IDGLCKA RL  A   F K+ +KG VP   TY+++I+G C+  K+ +A 
Sbjct: 125 ---NVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAY 181

Query: 494 DFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
             L  M+++G APNVVT++T++HGF +  K     +L  +M   E   +P+  T++ ++ 
Sbjct: 182 LLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMV--ENGCMPNLVTYNTLLS 239

Query: 554 LLAK----DEKYH 562
            L +    DE Y 
Sbjct: 240 GLCRNGLMDEAYE 252



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 79/305 (25%), Positives = 124/305 (40%), Gaps = 62/305 (20%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CK+G     EA   FG M     +P + +++ L G   K    D   + +  ++   +LP
Sbjct: 452 CKTG--RAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLP 509

Query: 109 DFLTLNILINCFGNK------ER----------------------GLCVENRIKEATWLF 140
           D +T + L+  + N       ER                      G C   R+ EA  + 
Sbjct: 510 DVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVL 569

Query: 141 KNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLIS----------- 189
           K M   G +P+V+TY  LI+ FCR G  +VA RL ++MV    +  +I+           
Sbjct: 570 KRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYRLLEEMVGNGVQPNVITYRSLIGGFCGT 629

Query: 190 -------------------KTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVV 230
                              K ++F+Y +++D LC+ G +  A EL   +K  G  P   +
Sbjct: 630 GDLEEARKILERLERDENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDI 689

Query: 231 CTTLIHGFCCAGNWEEVNGLFIEM-LDLGPRPNLLTFNVMIDCLCKGGKINEANGLL-EL 288
              LI G C      +   +  EM L    RPN   +  +I  L + G+  EAN L  EL
Sbjct: 690 YVALIRGLCQGKELGKAMEVLEEMTLSRKSRPNAEAYEAVIQELAREGRHEEANALADEL 749

Query: 289 MIQRG 293
           +  +G
Sbjct: 750 LGNKG 754



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 41/145 (28%), Positives = 77/145 (53%), Gaps = 6/145 (4%)

Query: 422 AVKLFHMLEMNK-FEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMI 480
           A++ FH     + F+  +  +N L + L +A R+D    +       G+ P V TY+++I
Sbjct: 7   ALRFFHWASKQQGFDHNVYTYNRLFEALLRARRIDETCHILKNGWPPGITPNVFTYAVVI 66

Query: 481 HGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERN 540
            GLC+ G L+KA + L  M ++G  P+   +N ++H   +   T+K ++    M E E+N
Sbjct: 67  QGLCKSGDLDKACELLEEMRESGPVPDAAIYNFVIHALCKARNTAKALDYFRSM-ECEKN 125

Query: 541 LVPDDTTFSIVVDLLAKDEKYHECS 565
           ++    T++I++D L K  +  E +
Sbjct: 126 VI----TWTIMIDGLCKANRLPEAT 146


>gi|413948659|gb|AFW81308.1| hypothetical protein ZEAMMB73_549819 [Zea mays]
          Length = 795

 Score =  283 bits (725), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 176/598 (29%), Positives = 294/598 (49%), Gaps = 79/598 (13%)

Query: 34  VSSPETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDA 93
           V S  T ++ F  E        +++A + F  M      P + ++N L   + K +  D 
Sbjct: 200 VVSYNTVIDGFFKEG------EVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQAMDK 253

Query: 94  VISFYRKLVSIGLLPDFLTLNILINCF---GNKERGL----------------------- 127
            ++  + +   G++PD  T NI+I  +   G  E  +                       
Sbjct: 254 AVAILQHMFDKGVMPDTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLLIQ 313

Query: 128 --CVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGD--- 182
             C   R  EA  +F +M+  G +P+   Y  L++G+   G L     L   M+      
Sbjct: 314 YYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPF 373

Query: 183 ----------------------------YENGLISKTNIFSYSIIIDSLCKEGLVDKAKE 214
                                        +NGL  + ++ SYS +I  LCK G V+ A  
Sbjct: 374 EHRAFNILICAYAKHGAVDKAMTAFTEMRQNGL--RPDVVSYSTVIHILCKTGRVEDAVY 431

Query: 215 LFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLC 274
            F +M   G++P ++  T+LIHG C  G W++V  L  EM++ G  P+ +  N ++D LC
Sbjct: 432 HFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLC 491

Query: 275 KGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVV 334
           K G++ EA    +++I  G+ PD  +YN+L+DGYC VG++D + +    M S G +    
Sbjct: 492 KEGRVVEAQDFFDMVIHIGVKPDVVSYNTLIDGYCFVGKMDESIKQLDRMVSIGLRPDSW 551

Query: 335 SYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEM 394
           +YN L+NGY K   VE+A++LYR++    V+   IT N +L GLFQAG+   A++L+ +M
Sbjct: 552 TYNSLLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIMLHGLFQAGRIVAARELYMKM 611

Query: 395 KLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRL 454
                +  + TYN ++ GLC+N+CV EA+++F  L   +FE  +  F+ +I+ L K GR+
Sbjct: 612 VDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVRTFSIVINALLKVGRI 671

Query: 455 DNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTL 514
           D A  LF  +  +G VP V+TYS+MI     +G LE++++  L MEKNGCA +    N +
Sbjct: 672 DEAKSLFSAMVLRGPVPDVITYSLMIKSHIEEGLLEESDNLFLSMEKNGCAADSHMLNII 731

Query: 515 MHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKD----------EKYH 562
           +   L+     +    L K+   E+N   + +T ++++ ++++           EKYH
Sbjct: 732 VRRLLEKGDVRRAGTYLTKI--DEKNFSLEASTAALLIPIVSEKKYQKEVKFLPEKYH 787



 Score =  231 bits (589), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 165/570 (28%), Positives = 261/570 (45%), Gaps = 41/570 (7%)

Query: 40  QLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKN------RHYDA 93
           +L   +    +SG +   +A   F  +        + +FN +   VA+       RH  A
Sbjct: 14  ELERIILNRHRSGSLGREDALNLFDELLPQARPASVHAFNSVLTVVARADSSSSPRHSAA 73

Query: 94  V-ISFYRKLVSIGLLPDFLTLNILINCFGNKER--------------------------- 125
           + +S +  +V  G+      + ILI CF    R                           
Sbjct: 74  LAVSLFNTMVRSGVNMMAAIIGILIRCFCTVGRLDLAFAAFALFLKTGWRVQNVTLNQLI 133

Query: 126 -GLCVENRIKEA-TWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDY 183
            GLC  NR  +A   +F+ M   G  PDV +Y  LI G C       AL L   M +   
Sbjct: 134 KGLCDGNRTDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLIHMTA--- 190

Query: 184 ENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGN 243
           + G     N+ SY+ +ID   KEG VDKA  LF EM G+G+ P VV   +LI G C A  
Sbjct: 191 DGGYNCSPNVVSYNTVIDGFFKEGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQA 250

Query: 244 WEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNS 303
            ++   +   M D G  P+  T+N+MI   C  G++ EA  LL+ M   GL PD  TY+ 
Sbjct: 251 MDKAVAILQHMFDKGVMPDTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSL 310

Query: 304 LMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNG 363
           L+  YC +GR   AR +F SM  KG K     Y+IL++GY     + +   L   +I +G
Sbjct: 311 LIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDG 370

Query: 364 VRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAV 423
           +      +N L+    + G    A   F EM+   + PD+ +Y+ +I  LCK   V++AV
Sbjct: 371 IPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVEDAV 430

Query: 424 KLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGL 483
             F+ +        I  F  LI GLC  G      EL  ++  +G+ P  +  + ++  L
Sbjct: 431 YHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNL 490

Query: 484 CRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVP 543
           C++G++ +A DF   +   G  P+VV++NTL+ G+    K  + ++ L +M      L P
Sbjct: 491 CKEGRVVEAQDFFDMVIHIGVKPDVVSYNTLIDGYCFVGKMDESIKQLDRMVSI--GLRP 548

Query: 544 DDTTFSIVVDLLAKDEKYHECSAVSKSSYR 573
           D  T++ +++   K+ +  +  A+ +  +R
Sbjct: 549 DSWTYNSLLNGYFKNGRVEDALALYREMFR 578


>gi|357130030|ref|XP_003566661.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 827

 Score =  283 bits (724), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 167/553 (30%), Positives = 283/553 (51%), Gaps = 43/553 (7%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
           N  +   CK+    +++A +    M      P   ++N +    + + H+      +RK+
Sbjct: 271 NSIVDALCKARA--MDKAEFVLRQMVDKGVEPDGVTYNAIIHGYSCSGHWKESAKMFRKM 328

Query: 102 VSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLING 161
            S GL+PD +T +  ++        LC   R K+A  +F+ M   G  PD+++Y  L++G
Sbjct: 329 TSKGLIPDTVTFSSFMS-------SLCKHGRSKDAEEIFQYMTTKGHMPDIVSYSILLHG 381

Query: 162 FCRTGNLSVALRLHKKM---------------VSGDYENGLIS--------------KTN 192
           +   G  +    L   M               +S   + G++               + N
Sbjct: 382 YATEGRFADMNNLFHSMADKGIVSNCHCINILISAHAKRGMMDEAMLVFTEMQGQGVRPN 441

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
           + +YS +I + C+ G +  A E F +M   GI P   V  +LIHGFC  G+  +      
Sbjct: 442 VVTYSTLISAFCRMGRLADAMEKFSQMISIGIEPNTAVYHSLIHGFCMHGDLVKAKEFIS 501

Query: 253 EMLDLG-PRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
           EM+  G  RPN++ F+ +I  LC  G++ +A  +  L+I  G  P   T+NSL+DGYCLV
Sbjct: 502 EMMSKGLHRPNIVFFSSIIHSLCIEGRVMDAQDVFNLVIHIGDRPTIVTFNSLIDGYCLV 561

Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
           G+++ A  +  +M S G +  VV+ N L++GYCK   +++ + L+R+++   V+ T +TY
Sbjct: 562 GKMEKAFGVLDAMVSVGIEPDVVTNNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTY 621

Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
           N +L GL +AG+   A+K+F EM       D+ TY IL+ GLC+N+   EA+ LFH L  
Sbjct: 622 NIVLDGLLRAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGA 681

Query: 432 NKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEK 491
              +F I I N +I+ L K  R + A +LF  +   GLVP V TY +MI  L ++G +E+
Sbjct: 682 MDCKFDITILNTMINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIRNLLKEGSVEE 741

Query: 492 ANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVP-DDTTFSI 550
           A+     MEK+GCAP+    N ++   LQ      +V+  + M++ +  ++  + +T S+
Sbjct: 742 ADTMFSSMEKSGCAPSSRLLNDIIRMLLQKG---DIVKAGYYMSKVDGTIISLEASTTSL 798

Query: 551 VVDLLAKDEKYHE 563
           ++ L +   K+ E
Sbjct: 799 LMSLFSSKGKHRE 811



 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 150/533 (28%), Positives = 245/533 (45%), Gaps = 57/533 (10%)

Query: 75  ISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIK 134
           + ++ +L     + R  D   +F  +L+  GL    +     + C       LC   R  
Sbjct: 124 VRTYGILMDCCCRARRPDLGPAFVARLLRAGLKTGTIQATTFLKC-------LCHAKRTD 176

Query: 135 EAT-WLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNI 193
           EA   L   M      PD I+Y T+I   C       AL + ++M     E G  S  ++
Sbjct: 177 EAVDVLLHRMSELSCVPDAISYNTVIKSLCGDSRSQEALDMVQRMAK---EGGRCSP-DV 232

Query: 194 FSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIE 253
            S++ +I    K+G V KA  LF EM  +G+ P V    +++   C A   ++   +  +
Sbjct: 233 VSFNTVIHGFFKQGEVSKACNLFNEMVQKGVVPDVGTYNSIVDALCKARAMDKAEFVLRQ 292

Query: 254 MLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGR 313
           M+D G  P+ +T+N +I      G   E+  +   M  +GL PD  T++S M   C  GR
Sbjct: 293 MVDKGVEPDGVTYNAIIHGYSCSGHWKESAKMFRKMTSKGLIPDTVTFSSFMSSLCKHGR 352

Query: 314 IDTAREIFLSMHSKGCKHTVVSYNILINGY------------------------CKILNV 349
              A EIF  M +KG    +VSY+IL++GY                        C  +N+
Sbjct: 353 SKDAEEIFQYMTTKGHMPDIVSYSILLHGYATEGRFADMNNLFHSMADKGIVSNCHCINI 412

Query: 350 -----------EEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYN 398
                      +EAM ++ ++   GVR  V+TY+TL+S   + G+   A + F +M    
Sbjct: 413 LISAHAKRGMMDEAMLVFTEMQGQGVRPNVVTYSTLISAFCRMGRLADAMEKFSQMISIG 472

Query: 399 VEPDLSTYNILIDGLCKNNCVQEAVKLF-HMLEMNKFEFGIEIFNCLIDGLCKAGRLDNA 457
           +EP+ + Y+ LI G C +  + +A +    M+        I  F+ +I  LC  GR+ +A
Sbjct: 473 IEPNTAVYHSLIHGFCMHGDLVKAKEFISEMMSKGLHRPNIVFFSSIIHSLCIEGRVMDA 532

Query: 458 WELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHG 517
            ++F+ +   G  PT+VT++ +I G C  GK+EKA   L  M   G  P+VVT NTL+ G
Sbjct: 533 QDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTNNTLVSG 592

Query: 518 FLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLL-------AKDEKYHE 563
           + ++ K    + L  +M    + + P   T++IV+D L       A  + +HE
Sbjct: 593 YCKSGKIDDGLILFREML--HKKVKPTTVTYNIVLDGLLRAGRTSAAKKMFHE 643


>gi|326533642|dbj|BAK05352.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 860

 Score =  281 bits (719), Expect = 7e-73,   Method: Compositional matrix adjust.
 Identities = 175/566 (30%), Positives = 285/566 (50%), Gaps = 72/566 (12%)

Query: 62  FFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFG 121
            F  MT     P + ++NL+  A+ K R  D      R++ + G  PD +T + +I+ + 
Sbjct: 287 LFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTDGAQPDTVTYSCMIHGYA 346

Query: 122 N--------------KERGL--------------CVENRIKEATWLFKNMIAFGVRPDVI 153
                          K+RGL              C   R KEA   F +M A G +PD+ 
Sbjct: 347 TLGRLKEAAKMFREMKKRGLIPNIVTCNSFLASLCKHGRSKEAAEFFDSMTAKGHKPDIF 406

Query: 154 TYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAK 213
           +Y TL++G+   G  +  + L   M S    NG+ +  ++F+  I+I +  K G+VD A 
Sbjct: 407 SYCTLLHGYASEGCFADMIGLFNSMKS----NGIAANCHVFT--ILIHAYAKRGMVDDAM 460

Query: 214 ELFLEMKGRGINPAVV-----------------------------------VCTTLIHGF 238
            +F EM+ +G++P VV                                   V +++I GF
Sbjct: 461 LIFTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQMVARGIQPNTAVYSSIIQGF 520

Query: 239 CCAGNWEEVNGLFIEMLDLG-PRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPD 297
           C  G   +   L  EM++ G PRP+++ F+ +I+ LCK G++ +A+ + +L    G  P 
Sbjct: 521 CMHGGLVKAKELVSEMINKGIPRPDIVFFSSVINSLCKDGRVMDAHDIFDLATDIGERPG 580

Query: 298 RFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYR 357
             T+NSL+DGYCLVG++D A +I  +M   G +  +V+YN L++GY K   + + ++L+R
Sbjct: 581 VITFNSLIDGYCLVGKMDKAFKILDAMEVVGVEPDIVTYNTLLDGYFKNGRINDGLTLFR 640

Query: 358 QIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNN 417
           ++   GV+   +TY  +L+GLF+AG+   A+K F EM        +S Y I++ GLC+NN
Sbjct: 641 EMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNN 700

Query: 418 CVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYS 477
           C  EA+ LF  L     +F I I N +I+ + K  R + A ELF  +   GL+P   TY 
Sbjct: 701 CADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELFATISASGLLPNESTYG 760

Query: 478 IMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEP 537
           +MI  L + G +E AN+    MEK+G  P     N ++   L+  + +K    L K+ + 
Sbjct: 761 VMIINLLKDGGVEDANNMFSSMEKSGIVPGSRLLNRIIRMLLEKGEIAKAGNYLSKV-DG 819

Query: 538 ERNLVPDDTTFSIVVDLLAKDEKYHE 563
           +R L+   TT S+++ L ++  KY E
Sbjct: 820 KRILLEASTT-SLMLSLFSRKGKYQE 844



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 157/610 (25%), Positives = 274/610 (44%), Gaps = 107/610 (17%)

Query: 47  ENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVIS---------F 97
           E  ++G ++ ++A + F  +       P  S N    A+A+     A I+         F
Sbjct: 81  ERVRAGTLSRDDAHHMFDELFRQATPVPGRSLNGFLAALARATSSSACITDGPALALALF 140

Query: 98  YR----KLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVI 153
            R    +  +   +P F T NIL++C        C   R      LF  ++  G++ D I
Sbjct: 141 NRVCREEAGTQVAVPTFCTYNILMDC-------CCRARRPDLGLALFGCILRTGLKMDQI 193

Query: 154 TYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAK 213
           T  TL+   C       A+ +    +S   E G +   N  SYSI++ +LC   +  +A 
Sbjct: 194 TANTLLKCLCYANRTEEAVNVLLHRMS---ELGCVP--NAVSYSIVLKALCDNSMSQRAL 248

Query: 214 ELFLEM--KGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMID 271
           +L   M  +G   +P VV  +T+IHGF   G   +   LF EM   G +P+++T+N++ID
Sbjct: 249 DLLQMMAKQGGACSPDVVAYSTVIHGFFNEGETGKACSLFHEMTRQGVKPDVVTYNLIID 308

Query: 272 CLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKG--- 328
            LCK   +++A  +L  M   G  PD  TY+ ++ GY  +GR+  A ++F  M  +G   
Sbjct: 309 ALCKARAMDKAELVLRQMTTDGAQPDTVTYSCMIHGYATLGRLKEAAKMFREMKKRGLIP 368

Query: 329 ------------CKH--------------------TVVSYNILINGY------------- 343
                       CKH                     + SY  L++GY             
Sbjct: 369 NIVTCNSFLASLCKHGRSKEAAEFFDSMTAKGHKPDIFSYCTLLHGYASEGCFADMIGLF 428

Query: 344 -----------CKILNV-----------EEAMSLYRQIISNGVRQTVITYNTLLSGLFQA 381
                      C +  +           ++AM ++ ++   GV   V+TY+T++S   + 
Sbjct: 429 NSMKSNGIAANCHVFTILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISTFSRM 488

Query: 382 GQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLF-HMLEMNKFEFGIEI 440
           G+   A + F++M    ++P+ + Y+ +I G C +  + +A +L   M+        I  
Sbjct: 489 GRLTDAMEKFNQMVARGIQPNTAVYSSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVF 548

Query: 441 FNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYME 500
           F+ +I+ LCK GR+ +A ++F      G  P V+T++ +I G C  GK++KA   L  ME
Sbjct: 549 FSSVINSLCKDGRVMDAHDIFDLATDIGERPGVITFNSLIDGYCLVGKMDKAFKILDAME 608

Query: 501 KNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLL----- 555
             G  P++VT+NTL+ G+ +N + +  + L  +M    + + P+  T+ I++  L     
Sbjct: 609 VVGVEPDIVTYNTLLDGYFKNGRINDGLTLFREMQ--RKGVKPNTVTYGIMLAGLFRAGR 666

Query: 556 --AKDEKYHE 563
             A  +K+HE
Sbjct: 667 TVAARKKFHE 676


>gi|357130059|ref|XP_003566674.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 833

 Score =  281 bits (719), Expect = 7e-73,   Method: Compositional matrix adjust.
 Identities = 169/537 (31%), Positives = 281/537 (52%), Gaps = 51/537 (9%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
           P   ++N +    + +  +      +R++ S GL+P+ +T N  ++        LC   +
Sbjct: 295 PNKVTYNCMIHGYSISGQWKETAGMFREMTSQGLMPNIVTCNSYMS-------SLCKHGK 347

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
            KEA   F +M A G +P+++TY  L++G+   G     L L   M      NG+++   
Sbjct: 348 SKEAAEFFDSMAAKGHKPNLVTYSVLLHGYATEGCFVDMLNLFNSMEG----NGIVADQR 403

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMK---------------------GR--------- 222
           +F+  I+ID+  K G++D+   +F +M+                     GR         
Sbjct: 404 VFN--IVIDAYGKRGMMDETMLIFTQMQEQGVIPDACTYGIVIAAFSRMGRLADAMDKFN 461

Query: 223 -----GINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLG-PRPNLLTFNVMIDCLCKG 276
                G+ P  +V  +LI GFC  GN  +   L  EM+  G PRPN++ FN +I+ LCK 
Sbjct: 462 QMIAMGLKPEGIVYHSLIQGFCMHGNLVKAKELVSEMMSRGIPRPNIVFFNSIINSLCKE 521

Query: 277 GKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSY 336
           G++ EA+ + + +I  G  PD  T+NSL+DGY LVG+I+ A  +  +M S G +  VVSY
Sbjct: 522 GRVVEAHDIFDFVIHIGERPDVITFNSLIDGYGLVGKIEKAFGVLDAMISAGIEPDVVSY 581

Query: 337 NILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKL 396
           N LI+GYC+   +++ + L+ +++S GV+ T ITY  +L GLF  G+   A+K+  EM  
Sbjct: 582 NTLIDGYCRNGRIDDGLILFGEMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIE 641

Query: 397 YNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDN 456
                D+ST  I++ GLC+NNC  EA+ +F  L     +F I I N +ID + K  + + 
Sbjct: 642 SGTTMDISTCGIILGGLCRNNCDDEAIAMFKKLGAMNVKFNIAIINTMIDAMYKVRKREE 701

Query: 457 AWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMH 516
           A ELF  +   GLVP   TY +MI  L ++G +E+A++    MEK+GCAP+    N ++ 
Sbjct: 702 AKELFDSISATGLVPNASTYGVMIKNLLKEGSVEEADNMFSLMEKSGCAPSSRLLNYIIR 761

Query: 517 GFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKSSYR 573
             L+  +  K    + K+     +L  + +T S+++ L +++ KY E   +  + Y+
Sbjct: 762 VLLEKGEIVKAGNYMFKVDGKRISL--EASTVSLLMALFSREGKYWEDVKLLPAKYQ 816



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 146/520 (28%), Positives = 238/520 (45%), Gaps = 40/520 (7%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
           P + ++N+L     + R      + + + +  GL  D +  +IL+ C  + +R   V N 
Sbjct: 117 PTVCTYNILMDCCCRTRRPTVGFALFGRFLKTGLKMDVIVASILLKCLYHAKRSDDVVN- 175

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVS------------ 180
                 L   M   GV PD I+Y T++   C       AL L   MV             
Sbjct: 176 -----LLLHRMPELGVEPDTISYNTVVKTLCEDSRSQRALDLLHTMVKKSGGCSPNVVTY 230

Query: 181 -----GDYENGLISKT--------------NIFSYSIIIDSLCKEGLVDKAKELFLEMKG 221
                G +  G +SK               ++ +Y+ IID+LCK   +DKA+ +  +M  
Sbjct: 231 NTVIHGLFREGEVSKACNLFHEMMQQGVVPDVVTYTSIIDALCKARAMDKAELVLRQMIS 290

Query: 222 RGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINE 281
            G  P  V    +IHG+  +G W+E  G+F EM   G  PN++T N  +  LCK GK  E
Sbjct: 291 NGFQPNKVTYNCMIHGYSISGQWKETAGMFREMTSQGLMPNIVTCNSYMSSLCKHGKSKE 350

Query: 282 ANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILIN 341
           A    + M  +G  P+  TY+ L+ GY   G       +F SM   G       +NI+I+
Sbjct: 351 AAEFFDSMAAKGHKPNLVTYSVLLHGYATEGCFVDMLNLFNSMEGNGIVADQRVFNIVID 410

Query: 342 GYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEP 401
            Y K   ++E M ++ Q+   GV     TY  +++   + G+   A   F++M    ++P
Sbjct: 411 AYGKRGMMDETMLIFTQMQEQGVIPDACTYGIVIAAFSRMGRLADAMDKFNQMIAMGLKP 470

Query: 402 DLSTYNILIDGLCKNNCVQEAVKLF-HMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWEL 460
           +   Y+ LI G C +  + +A +L   M+        I  FN +I+ LCK GR+  A ++
Sbjct: 471 EGIVYHSLIQGFCMHGNLVKAKELVSEMMSRGIPRPNIVFFNSIINSLCKEGRVVEAHDI 530

Query: 461 FHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQ 520
           F  +   G  P V+T++ +I G    GK+EKA   L  M   G  P+VV++NTL+ G+ +
Sbjct: 531 FDFVIHIGERPDVITFNSLIDGYGLVGKIEKAFGVLDAMISAGIEPDVVSYNTLIDGYCR 590

Query: 521 NNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEK 560
           N +    + L  +M    + + P   T+ I++  L  D +
Sbjct: 591 NGRIDDGLILFGEML--SKGVKPTTITYGIILHGLFNDGR 628



 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 138/537 (25%), Positives = 249/537 (46%), Gaps = 41/537 (7%)

Query: 66  MTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLV--SIGLLPDFLTLNILINCFGNK 123
           M  +   P   S+N +   + ++      +     +V  S G  P+ +T N +I+     
Sbjct: 181 MPELGVEPDTISYNTVVKTLCEDSRSQRALDLLHTMVKKSGGCSPNVVTYNTVIH----- 235

Query: 124 ERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDY 183
             GL  E  + +A  LF  M+  GV PDV+TY ++I+  C+   +  A  + ++M+S  +
Sbjct: 236 --GLFREGEVSKACNLFHEMMQQGVVPDVVTYTSIIDALCKARAMDKAELVLRQMISNGF 293

Query: 184 E-NGLISKTNIFSYSI----------------------------IIDSLCKEGLVDKAKE 214
           + N +     I  YSI                             + SLCK G   +A E
Sbjct: 294 QPNKVTYNCMIHGYSISGQWKETAGMFREMTSQGLMPNIVTCNSYMSSLCKHGKSKEAAE 353

Query: 215 LFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLC 274
            F  M  +G  P +V  + L+HG+   G + ++  LF  M   G   +   FN++ID   
Sbjct: 354 FFDSMAAKGHKPNLVTYSVLLHGYATEGCFVDMLNLFNSMEGNGIVADQRVFNIVIDAYG 413

Query: 275 KGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVV 334
           K G ++E   +   M ++G+ PD  TY  ++  +  +GR+  A + F  M + G K   +
Sbjct: 414 KRGMMDETMLIFTQMQEQGVIPDACTYGIVIAAFSRMGRLADAMDKFNQMIAMGLKPEGI 473

Query: 335 SYNILINGYCKILNVEEAMSLYRQIISNGV-RQTVITYNTLLSGLFQAGQAGYAQKLFDE 393
            Y+ LI G+C   N+ +A  L  +++S G+ R  ++ +N++++ L + G+   A  +FD 
Sbjct: 474 VYHSLIQGFCMHGNLVKAKELVSEMMSRGIPRPNIVFFNSIINSLCKEGRVVEAHDIFDF 533

Query: 394 MKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGR 453
           +      PD+ T+N LIDG      +++A  +   +     E  +  +N LIDG C+ GR
Sbjct: 534 VIHIGERPDVITFNSLIDGYGLVGKIEKAFGVLDAMISAGIEPDVVSYNTLIDGYCRNGR 593

Query: 454 LDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNT 513
           +D+   LF ++  KG+ PT +TY I++HGL   G+   A      M ++G   ++ T   
Sbjct: 594 IDDGLILFGEMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMDISTCGI 653

Query: 514 LMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKS 570
           ++ G  +NN   + + +  K+     N+  +    + ++D + K  K  E   +  S
Sbjct: 654 ILGGLCRNNCDDEAIAMFKKLG--AMNVKFNIAIINTMIDAMYKVRKREEAKELFDS 708



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 117/424 (27%), Positives = 204/424 (48%), Gaps = 16/424 (3%)

Query: 150 PDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLV 209
           P V TY  L++  CRT   +V   L  + +    + GL  K ++   SI++  L      
Sbjct: 117 PTVCTYNILMDCCCRTRRPTVGFALFGRFL----KTGL--KMDVIVASILLKCLYHAKRS 170

Query: 210 DKAKELFL-EMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDL--GPRPNLLTF 266
           D    L L  M   G+ P  +   T++   C     +    L   M+    G  PN++T+
Sbjct: 171 DDVVNLLLHRMPELGVEPDTISYNTVVKTLCEDSRSQRALDLLHTMVKKSGGCSPNVVTY 230

Query: 267 NVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHS 326
           N +I  L + G++++A  L   M+Q+G+ PD  TY S++D  C    +D A  +   M S
Sbjct: 231 NTVIHGLFREGEVSKACNLFHEMMQQGVVPDVVTYTSIIDALCKARAMDKAELVLRQMIS 290

Query: 327 KGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGY 386
            G +   V+YN +I+GY      +E   ++R++ S G+   ++T N+ +S L + G++  
Sbjct: 291 NGFQPNKVTYNCMIHGYSISGQWKETAGMFREMTSQGLMPNIVTCNSYMSSLCKHGKSKE 350

Query: 387 AQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLID 446
           A + FD M     +P+L TY++L+ G     C  + + LF+ +E N       +FN +ID
Sbjct: 351 AAEFFDSMAAKGHKPNLVTYSVLLHGYATEGCFVDMLNLFNSMEGNGIVADQRVFNIVID 410

Query: 447 GLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAP 506
              K G +D    +F ++ ++G++P   TY I+I    R G+L  A D    M   G  P
Sbjct: 411 AYGKRGMMDETMLIFTQMQEQGVIPDACTYGIVIAAFSRMGRLADAMDKFNQMIAMGLKP 470

Query: 507 NVVTFNTLMHGFLQNNKTSKVVELLHKMAE---PERNLVPDDTTFSIVVDLLAKDEKYHE 563
             + +++L+ GF  +    K  EL+ +M     P  N+V     F+ +++ L K+ +  E
Sbjct: 471 EGIVYHSLIQGFCMHGNLVKAKELVSEMMSRGIPRPNIV----FFNSIINSLCKEGRVVE 526

Query: 564 CSAV 567
              +
Sbjct: 527 AHDI 530



 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 69/256 (26%), Positives = 115/256 (44%), Gaps = 15/256 (5%)

Query: 41  LNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRK 100
            N  ++  CK G   + EA   F ++ H+   P + +FN L          +        
Sbjct: 511 FNSIINSLCKEG--RVVEAHDIFDFVIHIGERPDVITFNSLIDGYGLVGKIEKAFGVLDA 568

Query: 101 LVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLIN 160
           ++S G+ PD ++ N LI+       G C   RI +   LF  M++ GV+P  ITYG +++
Sbjct: 569 MISAGIEPDVVSYNTLID-------GYCRNGRIDDGLILFGEMLSKGVKPTTITYGIILH 621

Query: 161 GFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMK 220
           G    G    A ++  +M+    E+G  +  +I +  II+  LC+    D+A  +F ++ 
Sbjct: 622 GLFNDGRTVGAKKMCHEMI----ESG--TTMDISTCGIILGGLCRNNCDDEAIAMFKKLG 675

Query: 221 GRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKIN 280
              +   + +  T+I         EE   LF  +   G  PN  T+ VMI  L K G + 
Sbjct: 676 AMNVKFNIAIINTMIDAMYKVRKREEAKELFDSISATGLVPNASTYGVMIKNLLKEGSVE 735

Query: 281 EANGLLELMIQRGLNP 296
           EA+ +  LM + G  P
Sbjct: 736 EADNMFSLMEKSGCAP 751


>gi|334183592|ref|NP_001185295.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75179660|sp|Q9LQ15.1|PPR95_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62914, mitochondrial; Flags: Precursor
 gi|8493579|gb|AAF75802.1|AC011000_5 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
           repeats. EST gb|AA728420 comes from this gene
           [Arabidopsis thaliana]
 gi|332195900|gb|AEE34021.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 528

 Score =  281 bits (719), Expect = 7e-73,   Method: Compositional matrix adjust.
 Identities = 172/524 (32%), Positives = 264/524 (50%), Gaps = 81/524 (15%)

Query: 2   ASRTQFRCLFSSETVSKVKLSSLFKSPRQIAAVSSPETQLNEFLHENCKSGI--INLNEA 59
           A R   R L      +   LS  F   R  +  +S + +      E  ++G+  I L++A
Sbjct: 9   AKRFVHRSLVVRGNAATFPLSFSFCRRRAFSGKTSYDYR------EVLRTGLSDIELDDA 62

Query: 60  RYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL------------------ 101
              FG M   +P P I  F+ L  A+AK   +D VISF  K+                  
Sbjct: 63  IGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINC 122

Query: 102 -----------------VSIGLLPDFLTLNILIN--CFGNKE------------------ 124
                            + +G  PD +TLN L+N  C GN+                   
Sbjct: 123 FCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPD 182

Query: 125 --------RGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHK 176
                    GL + N+  EA  L   M+  G +PD++TYG ++NG C+ G+  +AL L  
Sbjct: 183 TVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLN 242

Query: 177 KMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIH 236
           KM +   E       N+  YS +IDSLCK    D A  LF EM+ +G+ P V+  ++LI 
Sbjct: 243 KMEAAKIE------ANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLIS 296

Query: 237 GFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNP 296
             C  G W + + L  +M++    PNL+TF+ +ID   K GK+ +A  L E MI+R ++P
Sbjct: 297 CLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDP 356

Query: 297 DRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLY 356
           + FTY+SL++G+C++ R+  A+++   M  K C   VV+YN LING+CK   V++ M L+
Sbjct: 357 NIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELF 416

Query: 357 RQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKN 416
           R++   G+    +TY TL+ G FQA     AQ +F +M    V P++ TYNIL+DGLCKN
Sbjct: 417 REMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKN 476

Query: 417 NCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWEL 460
             + +A+ +F  L+ +  E  I  +N +I+G+CKAG+    W++
Sbjct: 477 GKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGK----WKM 516



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 123/449 (27%), Positives = 226/449 (50%), Gaps = 8/449 (1%)

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
           + +A  LF  M      P +I +  L++   +     + +   +KM        L    N
Sbjct: 59  LDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKM------EILGISHN 112

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
           +++Y+I+I+  C+   +  A  L  +M   G  P +V   +L++GFC      +   L  
Sbjct: 113 LYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVD 172

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
           +M+++G +P+ +TF  +I  L    K +EA  L++ M+QRG  PD  TY ++++G C  G
Sbjct: 173 QMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRG 232

Query: 313 RIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYN 372
             D A  +   M +   +  VV Y+ +I+  CK  + ++A++L+ ++ + GVR  VITY+
Sbjct: 233 DTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYS 292

Query: 373 TLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMN 432
           +L+S L   G+   A +L  +M    + P+L T++ LID   K   + +A KL+  +   
Sbjct: 293 SLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKR 352

Query: 433 KFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKA 492
             +  I  ++ LI+G C   RL  A ++   + +K  +P VVTY+ +I+G C+  +++K 
Sbjct: 353 SIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKG 412

Query: 493 NDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVV 552
            +    M + G   N VT+ TL+HGF Q         +  +M      + P+  T++I++
Sbjct: 413 MELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSV--GVHPNILTYNILL 470

Query: 553 DLLAKDEKYHECSAVSKSSYRACLYVTIF 581
           D L K+ K  +   V +   R+ +   I+
Sbjct: 471 DGLCKNGKLAKAMVVFEYLQRSTMEPDIY 499



 Score =  135 bits (341), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 88/311 (28%), Positives = 149/311 (47%), Gaps = 37/311 (11%)

Query: 278 KINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYN 337
           ++++A GL  +M Q    P    ++ L+     + + D        M   G  H + +YN
Sbjct: 58  ELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYN 117

Query: 338 ILINGYCK----------------------------ILN-------VEEAMSLYRQIISN 362
           ILIN +C+                            +LN       + +A++L  Q++  
Sbjct: 118 ILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEM 177

Query: 363 GVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEA 422
           G +   +T+ TL+ GLF   +A  A  L D M     +PDL TY  +++GLCK      A
Sbjct: 178 GYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLA 237

Query: 423 VKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHG 482
           + L + +E  K E  + I++ +ID LCK    D+A  LF ++  KG+ P V+TYS +I  
Sbjct: 238 LNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISC 297

Query: 483 LCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLV 542
           LC  G+   A+  L  M +    PN+VTF+ L+  F++  K  K  +L  +M   +R++ 
Sbjct: 298 LCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMI--KRSID 355

Query: 543 PDDTTFSIVVD 553
           P+  T+S +++
Sbjct: 356 PNIFTYSSLIN 366



 Score = 86.7 bits (213), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 59/215 (27%), Positives = 114/215 (53%), Gaps = 10/215 (4%)

Query: 347 LNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTY 406
           + +++A+ L+  +  +    ++I ++ LLS + +  +        ++M++  +  +L TY
Sbjct: 57  IELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTY 116

Query: 407 NILIDGLCKNNCVQEAVKLFHMLEMNK--FEFGIEIFNCLIDGLCKAGRLDNAWELFHKL 464
           NILI+  C+  C + ++ L  + +M K  +E  I   N L++G C   R+ +A  L  ++
Sbjct: 117 NILINCFCR--CSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQM 174

Query: 465 PQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKT 524
            + G  P  VT++ +IHGL    K  +A   +  M + GC P++VT+  +++G  +   T
Sbjct: 175 VEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDT 234

Query: 525 SKVVELLHKM--AEPERNLVPDDTTFSIVVDLLAK 557
              + LL+KM  A+ E N+V     +S V+D L K
Sbjct: 235 DLALNLLNKMEAAKIEANVV----IYSTVIDSLCK 265


>gi|302758218|ref|XP_002962532.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
 gi|300169393|gb|EFJ35995.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
          Length = 1031

 Score =  280 bits (717), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 164/545 (30%), Positives = 266/545 (48%), Gaps = 51/545 (9%)

Query: 62  FFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFG 121
            F  M     +P   +++L+  ++ +    D   +   K    G  P+     IL     
Sbjct: 147 MFERMLDAGYAPDSYTYHLVIKSLCQMNQIDKAFTMLDKAKVRGFKPEVSVYTILT---- 202

Query: 122 NKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSG 181
              R  C   R+K+A  +F+N+ +    PD I Y  +I+G CR  +   AL   K+M   
Sbjct: 203 ---RAFCKTGRLKDALEIFRNIPS----PDAIAYNAIIHGHCRKNDCDGALEFLKEM--- 252

Query: 182 DYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCA 241
              N      ++F+Y+I+ID LCK    DKA E+  EM  RG+ P  V   +++ G C A
Sbjct: 253 ---NERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKA 309

Query: 242 GNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTY 301
           G +E  + L   M +   RP+  T+N +I  LCK   ++ A  L++  +  G  PD  TY
Sbjct: 310 GKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTY 369

Query: 302 NSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIIS 361
           + L DG C  GRID A E+   M  KGC   +V+YN LI+G CK    E+A  L   ++S
Sbjct: 370 SILADGLCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYELLESLVS 429

Query: 362 NGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQE 421
           +G    V+TY  ++ GL + G+   A K+ + M      P + TY  L++GLC+   V E
Sbjct: 430 SGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDE 489

Query: 422 AVKLFHML--------------------------EMNKFEFGI------EIFNCLIDGLC 449
           A  +F  +                          E  K   GI      +++N L+DG C
Sbjct: 490 AHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPYIDVYNALMDGYC 549

Query: 450 KAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVV 509
           K GRLD    +F  +  +G VP + TY+I++ GLC+ GK+++A  FL  M   GC P+VV
Sbjct: 550 KEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVV 609

Query: 510 TFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSK 569
           ++N ++ G  + +K  +  ++L +M +    + PD  T++ ++    K+E++ +   + K
Sbjct: 610 SYNIIIDGLFKASKPKEARQVLDQMIQA--GIPPDAVTYNTLMAQFCKEERFDDAVGILK 667

Query: 570 SSYRA 574
           +  +A
Sbjct: 668 NMIKA 672



 Score =  255 bits (652), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 170/562 (30%), Positives = 267/562 (47%), Gaps = 53/562 (9%)

Query: 36  SPET-QLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAV 94
           +P+T   N  +   CK+G      A      M      P   ++N L   + K ++ D  
Sbjct: 293 TPDTVTFNSIMDGLCKAG--KFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRA 350

Query: 95  ISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVIT 154
                + VS G +PD +T +IL +       GLC   RI EA  L K M   G  P+++T
Sbjct: 351 KDLVDEFVSSGFVPDVVTYSILAD-------GLCKRGRIDEAFELVKEMSGKGCTPNLVT 403

Query: 155 YGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKE 214
           Y TLI+G C+      A  L + +VS    +G +   ++ +Y+II+D LCKEG +DKA +
Sbjct: 404 YNTLIDGLCKASKTEKAYELLESLVS----SGFVP--DVVTYTIIVDGLCKEGRLDKALK 457

Query: 215 LFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLD------------------ 256
           +   M  RG  P+V+  T L+ G C  G  +E + +F EM+                   
Sbjct: 458 MVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYC 517

Query: 257 --------------LGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYN 302
                         +   P +  +N ++D  CK G+++E   + E M  RG  P+  TYN
Sbjct: 518 KSSRTKEAQKVVDGIRGTPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYN 577

Query: 303 SLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISN 362
            +MDG C  G++D A     SMHS GC   VVSYNI+I+G  K    +EA  +  Q+I  
Sbjct: 578 IVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQA 637

Query: 363 GVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEA 422
           G+    +TYNTL++   +  +   A  +   M    V+PD  TYN LI GL + N + +A
Sbjct: 638 GIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDA 697

Query: 423 VKLFH-MLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIH 481
            +L H ML           +N +ID LCK G L  A  L   +   G+    VTY+I I 
Sbjct: 698 YELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFID 757

Query: 482 GLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNL 541
            LC++G+L++A+  L  M+      + V++ T++ G  +  +  +  +L  +M    + L
Sbjct: 758 RLCKEGRLDEASSLLSEMDT---LRDEVSYTTVIIGLCKAEQLDRASKLAREMVAV-KGL 813

Query: 542 VPDDTTFSIVVDLLAKDEKYHE 563
                TF++++D   K ++  E
Sbjct: 814 CITSHTFNLLIDAFTKTKRLDE 835



 Score =  244 bits (623), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 164/599 (27%), Positives = 282/599 (47%), Gaps = 77/599 (12%)

Query: 34  VSSPET-QLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYD 92
           + SP+    N  +H +C+    + + A  F   M   + +P + ++N+L   + K    D
Sbjct: 221 IPSPDAIAYNAIIHGHCRKN--DCDGALEFLKEMNERKVAPDVFTYNILIDGLCKASKTD 278

Query: 93  AVISFYRKLVSIGLLPDFLTLNILIN--CFGNK------------ER------------- 125
                  ++V  G+ PD +T N +++  C   K            ER             
Sbjct: 279 KASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLI 338

Query: 126 -GLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYE 184
            GLC +  +  A  L    ++ G  PDV+TY  L +G C+ G +  A  L K+M      
Sbjct: 339 SGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGKGCT 398

Query: 185 NGLI------------SKT-----------------NIFSYSIIIDSLCKEGLVDKAKEL 215
             L+            SKT                 ++ +Y+II+D LCKEG +DKA ++
Sbjct: 399 PNLVTYNTLIDGLCKASKTEKAYELLESLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKM 458

Query: 216 FLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCK 275
              M  RG  P+V+  T L+ G C  G  +E + +F EM+      + L +  +++  CK
Sbjct: 459 VEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCK 518

Query: 276 GGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVS 335
             +  EA  +++ +  RG  P    YN+LMDGYC  GR+D    +F  M  +GC   + +
Sbjct: 519 SSRTKEAQKVVDGI--RG-TPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKT 575

Query: 336 YNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMK 395
           YNI+++G CK   V+EA      + S G    V++YN ++ GLF+A +   A+++ D+M 
Sbjct: 576 YNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMI 635

Query: 396 LYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIE----IFNCLIDGLCKA 451
              + PD  TYN L+   CK     +AV +      N  + G++     +N LI GL + 
Sbjct: 636 QAGIPPDAVTYNTLMAQFCKEERFDDAVGILK----NMIKAGVDPDNVTYNTLISGLSQT 691

Query: 452 GRLDNAWELFHKLPQKG-LVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVT 510
            RL +A+EL H++ + G +V    TY+ +I  LC++G L++A   + +M  +G   N VT
Sbjct: 692 NRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVT 751

Query: 511 FNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSK 569
           +N  +    +  +  +   LL +M     + + D+ +++ V+  L K E+    S +++
Sbjct: 752 YNIFIDRLCKEGRLDEASSLLSEM-----DTLRDEVSYTTVIIGLCKAEQLDRASKLAR 805



 Score =  231 bits (589), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 159/550 (28%), Positives = 247/550 (44%), Gaps = 69/550 (12%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CK G I+  EA      M+    +P + ++N L   + K    +        LVS G +P
Sbjct: 377 CKRGRID--EAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYELLESLVSSGFVP 434

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           D +T  I+++       GLC E R+ +A  + + M+  G  P VITY  L+ G CRTG +
Sbjct: 435 DVVTYTIIVD-------GLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRV 487

Query: 169 SVALRLHKKMVSGDYE--------------------------NGLISKTNIFSYSIIIDS 202
             A  + K+MVS D                            +G+     I  Y+ ++D 
Sbjct: 488 DEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPYIDVYNALMDG 547

Query: 203 LCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPN 262
            CKEG +D+   +F +M  RG  P +     ++ G C  G  +E       M   G  P+
Sbjct: 548 YCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPD 607

Query: 263 LLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFL 322
           ++++N++ID L K  K  EA  +L+ MIQ G+ PD  TYN+LM  +C   R D A  I  
Sbjct: 608 VVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILK 667

Query: 323 SMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNG-VRQTVITYNTLLSGLFQA 381
           +M   G     V+YN LI+G  +   + +A  L  +++ NG V     TYNT++  L + 
Sbjct: 668 NMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKE 727

Query: 382 GQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGI--- 438
           G    A  L D M  + VE +  TYNI ID LCK   + EA  L   ++  + E      
Sbjct: 728 GCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEMDTLRDEVSYTTV 787

Query: 439 ------------------------------EIFNCLIDGLCKAGRLDNAWELFHKLPQKG 468
                                           FN LID   K  RLD A  L   + Q+G
Sbjct: 788 IIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLGLMVQRG 847

Query: 469 LVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVV 528
             P+V+TY+++I  LC+  K++KA +    M   G   + V++  L++G     +  + +
Sbjct: 848 CSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEAL 907

Query: 529 ELLHKMAEPE 538
           ++L +MA  +
Sbjct: 908 QVLEEMASSD 917



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 126/388 (32%), Positives = 196/388 (50%), Gaps = 7/388 (1%)

Query: 194 FSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIE 253
           ++Y ++I SLC+   +DKA  +  + K RG  P V V T L   FC  G  ++   +F  
Sbjct: 161 YTYHLVIKSLCQMNQIDKAFTMLDKAKVRGFKPEVSVYTILTRAFCKTGRLKDALEIFRN 220

Query: 254 MLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGR 313
           +    P P+ + +N +I   C+    + A   L+ M +R + PD FTYN L+DG C   +
Sbjct: 221 I----PSPDAIAYNAIIHGHCRKNDCDGALEFLKEMNERKVAPDVFTYNILIDGLCKASK 276

Query: 314 IDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNT 373
            D A E+   M  +G     V++N +++G CK    E A SL   +     R +  TYNT
Sbjct: 277 TDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNT 336

Query: 374 LLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNK 433
           L+SGL +      A+ L DE       PD+ TY+IL DGLCK   + EA +L   +    
Sbjct: 337 LISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGKG 396

Query: 434 FEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKAN 493
               +  +N LIDGLCKA + + A+EL   L   G VP VVTY+I++ GLC++G+L+KA 
Sbjct: 397 CTPNLVTYNTLIDGLCKASKTEKAYELLESLVSSGFVPDVVTYTIIVDGLCKEGRLDKAL 456

Query: 494 DFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
             +  M K GC P+V+T+  LM G  +  +  +   +  +M    ++   D   +  +V+
Sbjct: 457 KMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMV--SKDCTADALAYVSLVN 514

Query: 554 LLAKDEKYHECSAVSKSSYRACLYVTIF 581
              K  +  E   V     R   Y+ ++
Sbjct: 515 GYCKSSRTKEAQKVV-DGIRGTPYIDVY 541



 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 107/317 (33%), Positives = 173/317 (54%), Gaps = 6/317 (1%)

Query: 242 GNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTY 301
           G+ + +  +F  MLD G  P+  T++++I  LC+  +I++A  +L+    RG  P+   Y
Sbjct: 139 GSSDRIPAMFERMLDAGYAPDSYTYHLVIKSLCQMNQIDKAFTMLDKAKVRGFKPEVSVY 198

Query: 302 NSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIIS 361
             L   +C  GR+  A EIF ++ S       ++YN +I+G+C+  + + A+   +++  
Sbjct: 199 TILTRAFCKTGRLKDALEIFRNIPSPD----AIAYNAIIHGHCRKNDCDGALEFLKEMNE 254

Query: 362 NGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQE 421
             V   V TYN L+ GL +A +   A ++  EM    V PD  T+N ++DGLCK    + 
Sbjct: 255 RKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFER 314

Query: 422 AVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIH 481
           A  L  ++           +N LI GLCK   +D A +L  +    G VP VVTYSI+  
Sbjct: 315 AHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSILAD 374

Query: 482 GLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNL 541
           GLC++G++++A + +  M   GC PN+VT+NTL+ G  + +KT K  ELL  +       
Sbjct: 375 GLCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYELLESLVSS--GF 432

Query: 542 VPDDTTFSIVVDLLAKD 558
           VPD  T++I+VD L K+
Sbjct: 433 VPDVVTYTIIVDGLCKE 449



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 105/355 (29%), Positives = 172/355 (48%), Gaps = 18/355 (5%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CK G   ++EA  F   M      P + S+N++   + K            +++  G+ P
Sbjct: 584 CKHG--KVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPP 641

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           D +T N L+  F       C E R  +A  + KNMI  GV PD +TY TLI+G  +T  L
Sbjct: 642 DAVTYNTLMAQF-------CKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRL 694

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
             A  L  +M+     NG +  +   +Y+ IID LCKEG + +A  L   M G G+    
Sbjct: 695 GDAYELMHEML----RNGCVV-SACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANT 749

Query: 229 VVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLEL 288
           V     I   C  G  +E + L  EM  L    + +++  +I  LCK  +++ A+ L   
Sbjct: 750 VTYNIFIDRLCKEGRLDEASSLLSEMDTL---RDEVSYTTVIIGLCKAEQLDRASKLARE 806

Query: 289 MIQ-RGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKIL 347
           M+  +GL     T+N L+D +    R+D A  +   M  +GC  +V++YN++I   CK+ 
Sbjct: 807 MVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLGLMVQRGCSPSVITYNMVITCLCKLD 866

Query: 348 NVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPD 402
            V++A  L+ ++   G+  + ++Y  L+ GL   G+   A ++ +EM   + E D
Sbjct: 867 KVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEALQVLEEMASSDCEID 921



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 113/399 (28%), Positives = 191/399 (47%), Gaps = 24/399 (6%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
           N  +   CK G   L+E    F  M      P I ++N++   + K+   D    F   +
Sbjct: 542 NALMDGYCKEG--RLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESM 599

Query: 102 VSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLING 161
            S G +PD ++ NI+I+       GL   ++ KEA  +   MI  G+ PD +TY TL+  
Sbjct: 600 HSAGCVPDVVSYNIIID-------GLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQ 652

Query: 162 FCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKG 221
           FC+      A+ + K M+        +   N+ +Y+ +I  L +   +  A EL  EM  
Sbjct: 653 FCKEERFDDAVGILKNMIKAG-----VDPDNV-TYNTLISGLSQTNRLGDAYELMHEMLR 706

Query: 222 RGINPAVVVCTT---LIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGK 278
            G    V  CTT   +I   C  G  ++   L   M   G   N +T+N+ ID LCK G+
Sbjct: 707 NGC--VVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGR 764

Query: 279 INEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHS-KGCKHTVVSYN 337
           ++EA+ LL  M       D  +Y +++ G C   ++D A ++   M + KG   T  ++N
Sbjct: 765 LDEASSLLSEM---DTLRDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFN 821

Query: 338 ILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLY 397
           +LI+ + K   ++EA++L   ++  G   +VITYN +++ L +  +   A +LFDEM + 
Sbjct: 822 LLIDAFTKTKRLDEALTLLGLMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVR 881

Query: 398 NVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEF 436
            +     +Y +LI GLC     +EA+++   +  +  E 
Sbjct: 882 GIVASSVSYTVLIYGLCGQGRGKEALQVLEEMASSDCEI 920



 Score =  125 bits (314), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 73/279 (26%), Positives = 132/279 (47%), Gaps = 33/279 (11%)

Query: 316 TAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLL 375
           TA   F+    +G KH+  + N  +    +  + +   +++ +++  G      TY+ ++
Sbjct: 108 TAIVFFVWAGDRGFKHSTFTRNCFLQTLLENGSSDRIPAMFERMLDAGYAPDSYTYHLVI 167

Query: 376 SGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFH-------- 427
             L Q  Q   A  + D+ K+   +P++S Y IL    CK   +++A+++F         
Sbjct: 168 KSLCQMNQIDKAFTMLDKAKVRGFKPEVSVYTILTRAFCKTGRLKDALEIFRNIPSPDAI 227

Query: 428 ---------------------MLEMNKFEFGIEIF--NCLIDGLCKAGRLDNAWELFHKL 464
                                + EMN+ +   ++F  N LIDGLCKA + D A E+ H++
Sbjct: 228 AYNAIIHGHCRKNDCDGALEFLKEMNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEM 287

Query: 465 PQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKT 524
             +G+ P  VT++ ++ GLC+ GK E+A+  L  M +  C P+  T+NTL+ G  +    
Sbjct: 288 VDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNV 347

Query: 525 SKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
            +  +L+ +        VPD  T+SI+ D L K  +  E
Sbjct: 348 DRAKDLVDEFVSS--GFVPDVVTYSILADGLCKRGRIDE 384



 Score =  122 bits (306), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 64/218 (29%), Positives = 111/218 (50%), Gaps = 6/218 (2%)

Query: 345 KILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLS 404
           ++ + + A+  +      G + +  T N  L  L + G +     +F+ M      PD  
Sbjct: 102 RLKDPQTAIVFFVWAGDRGFKHSTFTRNCFLQTLLENGSSDRIPAMFERMLDAGYAPDSY 161

Query: 405 TYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKL 464
           TY+++I  LC+ N + +A  +    ++  F+  + ++  L    CK GRL +A E+F  +
Sbjct: 162 TYHLVIKSLCQMNQIDKAFTMLDKAKVRGFKPEVSVYTILTRAFCKTGRLKDALEIFRNI 221

Query: 465 PQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKT 524
           P     P  + Y+ +IHG CRK   + A +FL  M +   AP+V T+N L+ G  + +KT
Sbjct: 222 PS----PDAIAYNAIIHGHCRKNDCDGALEFLKEMNERKVAPDVFTYNILIDGLCKASKT 277

Query: 525 SKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYH 562
            K  E+LH+M   +R + PD  TF+ ++D L K  K+ 
Sbjct: 278 DKASEMLHEMV--DRGVTPDTVTFNSIMDGLCKAGKFE 313


>gi|359485848|ref|XP_002267947.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Vitis vinifera]
          Length = 1011

 Score =  280 bits (716), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 159/510 (31%), Positives = 264/510 (51%), Gaps = 17/510 (3%)

Query: 44  FLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVS 103
            +  +CK G  N+ +A+     M     SP + ++N++ G + + R  D  I   R +V 
Sbjct: 221 MISAHCKVG--NVKDAKRVLLEMGEKGCSPNLVTYNVIIGGLCRARLLDEAIELKRSMVD 278

Query: 104 IGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFC 163
            GL+PD  T +ILIN       G C+E R +EA  +   MI  G++P+ ITY  LI+GF 
Sbjct: 279 KGLVPDLYTYDILIN-------GFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFM 331

Query: 164 RTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRG 223
           R G++  A R+  +MV+   E       N+  ++ +++ +CK G ++KA E+  EM  +G
Sbjct: 332 RQGDIEQAFRIKDEMVACGIE------ANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKG 385

Query: 224 INPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEAN 283
           + P     + LI G C   N      L  EM      P +LT++V+I+ LC+ G +   N
Sbjct: 386 VEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTN 445

Query: 284 GLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGY 343
            +L  M+  GL P+   Y +LM  +   GR++ +R I   M  +G    V  YN LI G+
Sbjct: 446 AILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGF 505

Query: 344 CKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDL 403
           CK   +EEA +   +++   +R    TY   + G  +AG+   A + F+EM    V P++
Sbjct: 506 CKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNV 565

Query: 404 STYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHK 463
             Y  LI+G CK   V EA  +F  +   +    ++ ++ LI GL + G++  A+ +F +
Sbjct: 566 GIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSE 625

Query: 464 LPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNK 523
           L +KGL+P   TY+ +I G C++G ++KA+  L  M   G  P++VT+N L+ G  +  +
Sbjct: 626 LQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGE 685

Query: 524 TSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
             +   L   +    R L P+  T++ +VD
Sbjct: 686 IERAKNLFDDI--EGRGLTPNCVTYAAMVD 713



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 151/545 (27%), Positives = 264/545 (48%), Gaps = 88/545 (16%)

Query: 91  YDAVISFYRKL------VSIGLLP-DFLTLNILINCFGNKERGLCVENRIKEATW-LFKN 142
           +D ++  YRK+      V++ L P +F     L++C  N   G  ++    E  W +F  
Sbjct: 148 FDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSC--NSLLGDLLKGNKVELFWKVFDG 205

Query: 143 MIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDS 202
           M A  V PDV TY  +I+  C+ GN+  A R+  +M     E G     N+ +Y++II  
Sbjct: 206 MCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEM----GEKG--CSPNLVTYNVIIGG 259

Query: 203 LCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPN 262
           LC+  L+D+A EL   M  +G+ P +     LI+GFC      E   + +EM+D+G +P 
Sbjct: 260 LCRARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPE 319

Query: 263 LLTFNVMID--------------------C---------------LCKGGKINEANGLLE 287
            +T+N +ID                    C               +CK GK+ +A  +++
Sbjct: 320 PITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQ 379

Query: 288 LMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKIL 347
            M+++G+ PD  TY+ L++G+C    +  A E+   M  +    TV++Y+++ING C+  
Sbjct: 380 EMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCG 439

Query: 348 NVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYN 407
           N++   ++ R+++ NG++   + Y TL++   + G+   ++ + + M+   + PD+  YN
Sbjct: 440 NLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYN 499

Query: 408 ILIDGLCKNNCVQEA-VKLFHMLEM----NKFEFG------------------------- 437
            LI G CK   ++EA   L  MLE     N   +G                         
Sbjct: 500 SLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSC 559

Query: 438 -----IEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKA 492
                + I+  LI+G CK G +  A+ +F  +  + ++  V TYS++IHGL R GK+ +A
Sbjct: 560 GVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEA 619

Query: 493 NDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVV 552
                 +++ G  PN  T+N+L+ G  +     K  +LL +M    + + PD  T++I++
Sbjct: 620 FGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMC--IKGINPDIVTYNILI 677

Query: 553 DLLAK 557
           D L K
Sbjct: 678 DGLCK 682



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 147/498 (29%), Positives = 235/498 (47%), Gaps = 16/498 (3%)

Query: 56  LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNI 115
           + EAR +   M   +  P   ++       +K    +    ++ +++S G+LP+      
Sbjct: 511 MEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTA 570

Query: 116 LINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLH 175
           LI        G C E  + EA  +F+ +++  V  DV TY  LI+G  R G +  A  + 
Sbjct: 571 LI-------EGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIF 623

Query: 176 KKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLI 235
            ++     E GL+   N F+Y+ +I   CK+G VDKA +L  EM  +GINP +V    LI
Sbjct: 624 SEL----QEKGLLP--NAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILI 677

Query: 236 HGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLN 295
            G C AG  E    LF ++   G  PN +T+  M+D  CK      A  LLE M+ RG+ 
Sbjct: 678 DGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVP 737

Query: 296 PDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSL 355
           PD F YN +++  C   + + A ++F  M  KG   TV S+N LI GYCK   ++EA  L
Sbjct: 738 PDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFASTV-SFNTLIEGYCKSGKLQEANHL 796

Query: 356 YRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCK 415
             ++I        +TY +L+    +AG  G A++L+ EM+  NV P   TY  L+ G   
Sbjct: 797 LEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHN 856

Query: 416 NNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVT 475
              + E   LF  +     E     +  +ID  C+ G +  A +L  ++  KG+  +V  
Sbjct: 857 IGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGMPMSVAA 916

Query: 476 YSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMA 535
           Y  +I  LC+K +  +    L  + ++G    + T + +  GF       +  E+L  M 
Sbjct: 917 YDALIQALCKKEEFFEVLKLLNEIGESGFRLGLPTCSVIARGFQIAGNMDEAAEVLRSMV 976

Query: 536 EPERNLVPDDTTFSIVVD 553
             +   V + T+   +VD
Sbjct: 977 --KFGWVSNTTSLGDLVD 992



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 126/453 (27%), Positives = 220/453 (48%), Gaps = 18/453 (3%)

Query: 48   NCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLL 107
            +CK G  N+ EA   F ++   +    + ++++L   +++N         + +L   GLL
Sbjct: 575  HCKEG--NVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLL 632

Query: 108  PDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGN 167
            P+  T N LI+       G C +  + +A+ L + M   G+ PD++TY  LI+G C+ G 
Sbjct: 633  PNAFTYNSLIS-------GSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGE 685

Query: 168  LSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPA 227
            +  A  L       D   G     N  +Y+ ++D  CK      A +L  EM  RG+ P 
Sbjct: 686  IERAKNLF------DDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPD 739

Query: 228  VVVCTTLIHGFCCAGN-WEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLL 286
              +   +++ FCC    +E+   LF EML+ G   + ++FN +I+  CK GK+ EAN LL
Sbjct: 740  AFIYNVILN-FCCKEEKFEKALDLFQEMLEKG-FASTVSFNTLIEGYCKSGKLQEANHLL 797

Query: 287  ELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKI 346
            E MI++   P+  TY SL+D  C  G +  A+ ++L M  +    T  +Y  L++GY  I
Sbjct: 798  EEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNI 857

Query: 347  LNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTY 406
             N+ E  +L+ ++++ G+    +TY  ++    + G    A KL DE+ +  +   ++ Y
Sbjct: 858  GNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGMPMSVAAY 917

Query: 407  NILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQ 466
            + LI  LCK     E +KL + +  + F  G+   + +  G   AG +D A E+   + +
Sbjct: 918  DALIQALCKKEEFFEVLKLLNEIGESGFRLGLPTCSVIARGFQIAGNMDEAAEVLRSMVK 977

Query: 467  KGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYM 499
             G V    +   ++ G       E +++ L  M
Sbjct: 978  FGWVSNTTSLGDLVDGNQNGANSEDSDNLLKQM 1010



 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 113/408 (27%), Positives = 215/408 (52%), Gaps = 8/408 (1%)

Query: 150 PDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLV 209
           P+ + +  L++ + + G L  A+ +     + ++   L+S  ++         L K   V
Sbjct: 143 PNSVIFDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLG------DLLKGNKV 196

Query: 210 DKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVM 269
           +   ++F  M    + P V   T +I   C  GN ++   + +EM + G  PNL+T+NV+
Sbjct: 197 ELFWKVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKGCSPNLVTYNVI 256

Query: 270 IDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGC 329
           I  LC+   ++EA  L   M+ +GL PD +TY+ L++G+C+  R   A+ + L M   G 
Sbjct: 257 IGGLCRARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGL 316

Query: 330 KHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQK 389
           K   ++YN LI+G+ +  ++E+A  +  ++++ G+   +I +NTLL+G+ +AG+   A +
Sbjct: 317 KPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALE 376

Query: 390 LFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLC 449
           +  EM    VEPD  TY++LI+G C+   +  A +L   ++  K    +  ++ +I+GLC
Sbjct: 377 IMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLC 436

Query: 450 KAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVV 509
           + G L     +  ++   GL P  V Y+ ++    ++G++E++   L  M + G  P+V 
Sbjct: 437 RCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVF 496

Query: 510 TFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAK 557
            +N+L+ GF +  +  +    L +M   ER L P+  T+   +D  +K
Sbjct: 497 CYNSLIIGFCKAKRMEEARTYLMEML--ERRLRPNAHTYGAFIDGYSK 542



 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 99/359 (27%), Positives = 190/359 (52%), Gaps = 12/359 (3%)

Query: 249 GLFIEMLD--LGP-----RPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTY 301
           G  +E ++  LGP     RP+LL+ N ++  L KG K+     + + M    + PD +TY
Sbjct: 159 GFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVELFWKVFDGMCAHKVLPDVYTY 218

Query: 302 NSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIIS 361
            +++  +C VG +  A+ + L M  KGC   +V+YN++I G C+   ++EA+ L R ++ 
Sbjct: 219 TNMISAHCKVGNVKDAKRVLLEMGEKGCSPNLVTYNVIIGGLCRARLLDEAIELKRSMVD 278

Query: 362 NGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQE 421
            G+   + TY+ L++G     ++  A+ +  EM    ++P+  TYN LIDG  +   +++
Sbjct: 279 KGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQ 338

Query: 422 AVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIH 481
           A ++   +     E  + I+N L++G+CKAG+++ A E+  ++ +KG+ P   TYS++I 
Sbjct: 339 AFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIE 398

Query: 482 GLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNL 541
           G CR   + +A + L  M+K   AP V+T++ +++G  +         +L +M      L
Sbjct: 399 GHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMV--MNGL 456

Query: 542 VPDDTTFSIVVDLLAKDEKYHECSAVSKSSYRACLYVTIFQPSSLGSMIG-CTVRLMPQ 599
            P+   ++ ++   AK+ +  E   + +      +   +F  +SL  +IG C  + M +
Sbjct: 457 KPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSL--IIGFCKAKRMEE 513



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 49/168 (29%), Positives = 89/168 (52%), Gaps = 6/168 (3%)

Query: 398 NVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNC--LIDGLCKAGRLD 455
           N  P+   +++L+D   K   + EAV +F  L    FEF   + +C  L+  L K  +++
Sbjct: 140 NGSPNSVIFDMLMDSYRKMGFLVEAVNVF--LGPKNFEFRPSLLSCNSLLGDLLKGNKVE 197

Query: 456 NAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLM 515
             W++F  +    ++P V TY+ MI   C+ G ++ A   LL M + GC+PN+VT+N ++
Sbjct: 198 LFWKVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKGCSPNLVTYNVII 257

Query: 516 HGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
            G  +     + +EL   M   ++ LVPD  T+ I+++    +++  E
Sbjct: 258 GGLCRARLLDEAIELKRSMV--DKGLVPDLYTYDILINGFCMEKRSRE 303


>gi|225436658|ref|XP_002276327.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g28010-like [Vitis vinifera]
          Length = 728

 Score =  280 bits (715), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 188/586 (32%), Positives = 285/586 (48%), Gaps = 79/586 (13%)

Query: 38  ETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISF 97
           ETQL       C+       EA   F         P  ++ N L  A+A++R+Y    S 
Sbjct: 41  ETQLRSL----CQKPNSQFTEAVSLFHSALDFNLLPSWATCNFLVDALARSRNYGLAFSV 96

Query: 98  YRKLVSIGLLPDFLTLNILINCFGNKE----------------------------RGLCV 129
           YR++  + +LP F +L+ LI CF + +                            +GLC 
Sbjct: 97  YRRMTHVDVLPSFGSLSALIECFADAQKPQLGFGVVGLVLKRGFTVNVFIMNIVLKGLCR 156

Query: 130 ENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKM-VSGDYENGLI 188
              + EA  L + M    V PD+++Y TLING C+   L  A+ L  +M  +G + N + 
Sbjct: 157 NGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVT 216

Query: 189 SKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVN 248
             T       ++D LCK+G +D+A EL   MK +G +  VV+  TLI GFC  GN +   
Sbjct: 217 CTT-------LMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGK 269

Query: 249 GLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGY 308
            LF EML  G   N++T++ ++  LC+ G+  EAN +L  M + G++PD  TY  L+DG 
Sbjct: 270 ELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGL 329

Query: 309 CLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTV 368
           C  GR   A ++   M  KG + + V+YN+L++G CK   V +A  + R +I  G +  V
Sbjct: 330 CKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADV 389

Query: 369 ITYNTLLSGLFQAGQAGYAQKLFDEM--KLYNVEPDLSTYNILIDGLCKNNCVQEAVKLF 426
           +TYNTL+ GL   G+   A KLF+ M      +EP++ T+N+LI GLCK   + +AVK+ 
Sbjct: 390 VTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIH 449

Query: 427 HMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHG---- 482
             +        +  +N L+ G  KAG++  A EL+ ++   G VP   TYSI+I G    
Sbjct: 450 RKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKM 509

Query: 483 -------------------------------LCRKGKLEKANDFLLYMEKNGCAPNVVTF 511
                                          LC++G LE+A      M    C P++++F
Sbjct: 510 RMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISF 569

Query: 512 NTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAK 557
           NT++ G L+      V EL  KM   E  L PD  TFS +++ L+K
Sbjct: 570 NTMIDGTLKAGDFQFVKELQMKMV--EMGLRPDALTFSTLINRLSK 613



 Score =  244 bits (623), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 175/594 (29%), Positives = 276/594 (46%), Gaps = 63/594 (10%)

Query: 41  LNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRK 100
           +N  L   C++G   + EA      M     SP I S+N L   + K +     +    +
Sbjct: 147 MNIVLKGLCRNG--GVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLE 204

Query: 101 LVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLIN 160
           + + G  P+ +T   L++       GLC + R+ EA  L + M   G   DV+ YGTLI+
Sbjct: 205 MEAAGCFPNSVTCTTLMD-------GLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLIS 257

Query: 161 GFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMK 220
           GFC  GNL     L  +M+      G     N+ +YS ++  LC+ G   +A  +   M 
Sbjct: 258 GFCNNGNLDRGKELFDEML------GKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMA 311

Query: 221 GRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKIN 280
             GI+P VV  T LI G C  G       L   M++ G  P+ +T+NV++  LCK G + 
Sbjct: 312 EHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVI 371

Query: 281 EANGLLELMIQRG-------------------------------------LNPDRFTYNS 303
           +A  +L +MI++G                                     L P+ FT+N 
Sbjct: 372 DAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNM 431

Query: 304 LMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNG 363
           L+ G C  GR+  A +I   M  KG    +V+YN+L+ G  K   ++EAM L++Q++  G
Sbjct: 432 LIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLG 491

Query: 364 VRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAV 423
                 TY+ L+ G  +      A+ LF EM+ + + P L  YN L+  LCK   +++A 
Sbjct: 492 FVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAK 551

Query: 424 KLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGL 483
            LF  +     E  I  FN +IDG  KAG      EL  K+ + GL P  +T+S +I+ L
Sbjct: 552 SLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRL 611

Query: 484 CRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVP 543
            + G+L++A   L  M  +G  P+ + +++L+ G      T++++ LLH+MA   +  V 
Sbjct: 612 SKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMA--AKGTVL 669

Query: 544 DDTTFSIVVDLLAKDEKYHECSAVSKSSYRACLYVTIFQPSSLGSMIGCTVRLM 597
           D    S ++  L        C ++ +      L  T FQ +S G+ I C   LM
Sbjct: 670 DRKIVSTILTCL--------CHSIQEVDVME-LLPTFFQGTSEGASISCNELLM 714



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 119/447 (26%), Positives = 212/447 (47%), Gaps = 43/447 (9%)

Query: 125 RGLCVE--NRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGD 182
           R LC +  ++  EA  LF + + F + P   T   L++   R+ N  +A  ++++M   D
Sbjct: 45  RSLCQKPNSQFTEAVSLFHSALDFNLLPSWATCNFLVDALARSRNYGLAFSVYRRMTHVD 104

Query: 183 YENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAG 242
                                                    + P+    + LI  F  A 
Sbjct: 105 -----------------------------------------VLPSFGSLSALIECFADAQ 123

Query: 243 NWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYN 302
             +   G+   +L  G   N+   N+++  LC+ G + EA GL+  M ++ ++PD  +YN
Sbjct: 124 KPQLGFGVVGLVLKRGFTVNVFIMNIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYN 183

Query: 303 SLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISN 362
           +L++G C   ++  A  + L M + GC    V+   L++G CK   ++EAM L   +   
Sbjct: 184 TLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKK 243

Query: 363 GVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEA 422
           G    V+ Y TL+SG    G     ++LFDEM    +  ++ TY+ L+ GLC+    +EA
Sbjct: 244 GFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEA 303

Query: 423 VKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHG 482
             + + +  +     +  +  LIDGLCK GR  +A +L + + +KG  P+ VTY++++ G
Sbjct: 304 NTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSG 363

Query: 483 LCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLV 542
           LC++G +  A   L  M + G   +VVT+NTLM G     K  + ++L + M + E  L 
Sbjct: 364 LCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLE 423

Query: 543 PDDTTFSIVVDLLAKDEKYHECSAVSK 569
           P+  TF++++  L K+ +  +   + +
Sbjct: 424 PNVFTFNMLIGGLCKEGRLTKAVKIHR 450



 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 107/346 (30%), Positives = 173/346 (50%), Gaps = 25/346 (7%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQP--SPPISSFNLLFGAVAKNRHYDAVISFYR 99
           N  +   C  G   ++EA   F  M   +    P + +FN+L G + K       +  +R
Sbjct: 393 NTLMKGLCDKG--KVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHR 450

Query: 100 KLVSIGLLPDFLTLNILINCFGNKERGLCVE-NRIKEATWLFKNMIAFGVRPDVITYGTL 158
           K+V  G   + +T N+L+        G C++  +IKEA  L+K ++  G  P+  TY  L
Sbjct: 451 KMVKKGSCGNLVTYNMLL--------GGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSIL 502

Query: 159 INGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLE 218
           I+GFC+   L++A  L  +M +    +GL     +F Y+ ++ SLCKEG +++AK LF E
Sbjct: 503 IDGFCKMRMLNIAKGLFCEMRT----HGL--NPALFDYNTLMASLCKEGSLEQAKSLFQE 556

Query: 219 MKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGK 278
           M      P ++   T+I G   AG+++ V  L ++M+++G RP+ LTF+ +I+ L K G+
Sbjct: 557 MGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGE 616

Query: 279 INEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNI 338
           ++EA   LE M+  G  PD   Y+SL+ G  L  + DT  EI   +H    K TV+   I
Sbjct: 617 LDEAKSALERMVASGFTPDALVYDSLLKG--LSSKGDTT-EIINLLHQMAAKGTVLDRKI 673

Query: 339 ---LINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQA 381
              ++   C  +   + M L             I+ N LL  L Q+
Sbjct: 674 VSTILTCLCHSIQEVDVMELLPTFFQGTSEGASISCNELLMQLHQS 719


>gi|302791141|ref|XP_002977337.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
 gi|300154707|gb|EFJ21341.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
          Length = 636

 Score =  279 bits (714), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 152/492 (30%), Positives = 263/492 (53%), Gaps = 15/492 (3%)

Query: 69  MQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLC 128
           M+    + ++ ++   + K        +++ K+   G +P+  T N+LIN       G C
Sbjct: 1   MECEKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLIN-------GFC 53

Query: 129 VENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLI 188
             +++  A  L K M   G+ P+V+TY T+I+GFCR   +  A +L ++MV    ENG +
Sbjct: 54  KVHKVHRAYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMV----ENGCM 109

Query: 189 SKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVN 248
              N+ +Y+ ++  LC+ GL+D+A EL  EM+ RG+ P      TL+ G C  G  +   
Sbjct: 110 P--NLVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMAL 167

Query: 249 GLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGY 308
            +F +  +    P+++ ++ +I  LCK G+++EA  L E M +    PD  T+ +LMDG 
Sbjct: 168 KVFEDNSNGDCPPDVVAYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGL 227

Query: 309 CLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTV 368
           C   R+  A+++  +M  + C   V++Y+ LI+G CK   V +A  +++++I  G+   V
Sbjct: 228 CKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNV 287

Query: 369 ITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHM 428
           +TYN+L+ G         A  L +EM      PD+ TYN LIDGLCK     EA +LF  
Sbjct: 288 VTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGD 347

Query: 429 LEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGK 488
           ++       +  ++CLI G CK  R+D A  LF  + ++ ++P VVT+S ++ G C  G 
Sbjct: 348 MKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGL 407

Query: 489 LEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTF 548
           ++ A   L  M  + C+P+V T+ +L+ GF +  +  +   +L +MA  +R   P+  T+
Sbjct: 408 VDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMA--KRGCQPNVVTY 465

Query: 549 SIVVDLLAKDEK 560
           + ++D   +  K
Sbjct: 466 TALIDAFCRAGK 477



 Score =  275 bits (703), Expect = 6e-71,   Method: Compositional matrix adjust.
 Identities = 164/593 (27%), Positives = 293/593 (49%), Gaps = 23/593 (3%)

Query: 20  KLSSLFKSPRQIAAVSSPETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPS---PPIS 76
           K + L ++    A +    T  NE+ +    +G   +++    +  +  M+ S   P + 
Sbjct: 19  KANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLAPNVV 78

Query: 77  SFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEA 136
           +++ +     +    D     +R++V  G +P+ +T N L++       GLC    + EA
Sbjct: 79  TYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLS-------GLCRNGLMDEA 131

Query: 137 TWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSY 196
             L   M   G++PD  +Y TL+ G C+TG + +AL++ +   +GD         ++ +Y
Sbjct: 132 YELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGD------CPPDVVAY 185

Query: 197 SIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLD 256
           S +I  LCK G +D+A +LF +M+     P VV  T L+ G C     +E   +   M D
Sbjct: 186 STLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMED 245

Query: 257 LGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDT 316
               PN++T++ +ID LCK G++ +A  + + MI RG+ P+  TYNSL+ G+C+   +D+
Sbjct: 246 RNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDS 305

Query: 317 AREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLS 376
           A  +   M + GC   +++YN LI+G CK     EA  L+  + +      VITY+ L+ 
Sbjct: 306 ALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIG 365

Query: 377 GLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEF 436
           G  +  +   A+ LFD+M    V PD+ T++ L++G C    V +A +L   +  +    
Sbjct: 366 GFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSP 425

Query: 437 GIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFL 496
            +  +  L+DG CK GR+  A  +  ++ ++G  P VVTY+ +I   CR GK   A   L
Sbjct: 426 DVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYKLL 485

Query: 497 LYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLA 556
             M  NG  PNV+T+ +L+ GF       +  ++L ++ E + N   D   + +++D L 
Sbjct: 486 EEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKMLERL-ERDENCKADMFAYRVMMDGLC 544

Query: 557 KDEKYH------ECSAVSKSSYRACLYVTIFQPSSLGSMIGCTVRLMPQPEMS 603
           +  +        E    S +  R  +YV + +    G  +G  + ++ +  +S
Sbjct: 545 RTGRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLS 597



 Score =  243 bits (620), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 139/447 (31%), Positives = 232/447 (51%), Gaps = 17/447 (3%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CK+G   L+EA   F  M      P + +F  L   + K             +      P
Sbjct: 193 CKTG--RLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTP 250

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           + +T + LI+       GLC   ++++A  +FK MI  G+ P+V+TY +LI+GFC T  +
Sbjct: 251 NVITYSSLID-------GLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGV 303

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
             AL L ++M +     G +   +I +Y+ +ID LCK G   +A  LF +MK +  NP V
Sbjct: 304 DSALLLMEEMTA----TGCLP--DIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDV 357

Query: 229 VVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLEL 288
           +  + LI GFC     +    LF +ML     P+++TF+ +++  C  G +++A  LLE 
Sbjct: 358 ITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEE 417

Query: 289 MIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILN 348
           M+    +PD +TY SL+DG+C VGR+  AR +   M  +GC+  VV+Y  LI+ +C+   
Sbjct: 418 MVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGK 477

Query: 349 VEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEM-KLYNVEPDLSTYN 407
              A  L  +++ NGV+  VITY +L+ G    G    A+K+ + + +  N + D+  Y 
Sbjct: 478 PTVAYKLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKMLERLERDENCKADMFAYR 537

Query: 408 ILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLP-Q 466
           +++DGLC+   +  A++L   ++ +      +I+  LI GLC+   L  A E+  ++   
Sbjct: 538 VMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLS 597

Query: 467 KGLVPTVVTYSIMIHGLCRKGKLEKAN 493
           +   P    Y  +I  L R+G+ E+AN
Sbjct: 598 RKSRPNAEAYEAVIQELAREGRHEEAN 624



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 79/312 (25%), Positives = 126/312 (40%), Gaps = 62/312 (19%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
           N  +   CK+G     EA   FG M     +P + +++ L G   K    D   + +  +
Sbjct: 326 NTLIDGLCKTG--RAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDM 383

Query: 102 VSIGLLPDFLTLNILINCFGNK------ER----------------------GLCVENRI 133
           +   +LPD +T + L+  + N       ER                      G C   R+
Sbjct: 384 LKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRM 443

Query: 134 KEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLIS---- 189
            EA  + K M   G +P+V+TY  LI+ FCR G  +VA +L ++MV    +  +I+    
Sbjct: 444 VEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYKLLEEMVGNGVQPNVITYRSL 503

Query: 190 --------------------------KTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRG 223
                                     K ++F+Y +++D LC+ G +  A EL   +K  G
Sbjct: 504 IGGFCGTGDLEEARKMLERLERDENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQSG 563

Query: 224 INPAVVVCTTLIHGFCCAGNWEEVNGLFIEM-LDLGPRPNLLTFNVMIDCLCKGGKINEA 282
             P   +   LI G C      +   +  EM L    RPN   +  +I  L + G+  EA
Sbjct: 564 TPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLSRKSRPNAEAYEAVIQELAREGRHEEA 623

Query: 283 NGLL-ELMIQRG 293
           N L  EL+  +G
Sbjct: 624 NALADELLGNKG 635


>gi|356532720|ref|XP_003534919.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g22470, mitochondrial-like [Glycine max]
          Length = 468

 Score =  278 bits (711), Expect = 7e-72,   Method: Compositional matrix adjust.
 Identities = 163/469 (34%), Positives = 253/469 (53%), Gaps = 15/469 (3%)

Query: 66  MTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKER 125
           M  ++ + PI  FN + G++ K ++Y  VIS  +++   G+  + +TL+ILINCF     
Sbjct: 1   MLLVRHTSPIIEFNKILGSLVKLKYYLTVISLSKQMDVKGIEQNLVTLSILINCF----- 55

Query: 126 GLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYEN 185
             C   ++  +  L   ++  G  P+ IT+ TL+ G C  G +   L  H K+V+  ++ 
Sbjct: 56  --CHLGQMAFSFSLLGKILKLGYXPNTITWTTLMKGLCLKGEVKKLLHFHDKVVAQAFQ- 112

Query: 186 GLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWE 245
                TN  SY  +++ LCK G    A +L   ++ R   P VV+ + +I G C      
Sbjct: 113 -----TNQVSYGTLLNGLCKTGETRCAIKLLRMIEDRSTRPNVVMYSAIIDGLCKDKLVN 167

Query: 246 EVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLM 305
           E   L+ EM      PN++T+N +I   C  G++  A  LL  MI + +NPD +T++ L+
Sbjct: 168 EAYDLYSEMDAREIFPNVITYNTLICAFCLAGQLMGAFSLLHEMILKNINPDVYTFSILI 227

Query: 306 DGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVR 365
           D  C  G+   A++IF +M   G    V SYNI+ING CK   V+EAM+L R+++   + 
Sbjct: 228 DALCKEGK--NAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMV 285

Query: 366 QTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKL 425
              +TYN+L+ GL ++G+   A  L +EM       D+ TY  L+D LCKN  + +A  L
Sbjct: 286 PDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATAL 345

Query: 426 FHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCR 485
           F  ++    +  +  +  LIDGLCK GRL NA ELF  L  KG    V TY++MI GLC+
Sbjct: 346 FMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCK 405

Query: 486 KGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKM 534
           +G  ++A      ME NGC PN VTF  ++    + ++  K  +LLH+M
Sbjct: 406 EGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEKDENDKAEKLLHEM 454



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 91/316 (28%), Positives = 151/316 (47%), Gaps = 17/316 (5%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CK  ++N  EA   +  M   +  P + ++N L  A           S   +++   + P
Sbjct: 161 CKDKLVN--EAYDLYSEMDAREIFPNVITYNTLICAFCLAGQLMGAFSLLHEMILKNINP 218

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           D  T +ILI+        LC E   K A  +F  M+  GV P+V +Y  +ING C+   +
Sbjct: 219 DVYTFSILID-------ALCKEG--KNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRV 269

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
             A+ L ++M+       ++  T   +Y+ +ID LCK G +  A  L  EM  RG    V
Sbjct: 270 DEAMNLLREML----HKNMVPDT--VTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADV 323

Query: 229 VVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLEL 288
           V  T+L+   C   N ++   LF++M + G +P + T+  +ID LCKGG++  A  L + 
Sbjct: 324 VTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQH 383

Query: 289 MIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILN 348
           ++ +G   D +TY  ++ G C  G  D A  I   M   GC    V++ I+I    +   
Sbjct: 384 LLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEKDE 443

Query: 349 VEEAMSLYRQIISNGV 364
            ++A  L  ++I+ G+
Sbjct: 444 NDKAEKLLHEMIAKGL 459



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 39/158 (24%), Positives = 81/158 (51%), Gaps = 2/158 (1%)

Query: 406 YNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLP 465
           +N ++  L K       + L   +++   E  +   + LI+  C  G++  ++ L  K+ 
Sbjct: 13  FNKILGSLVKLKYYLTVISLSKQMDVKGIEQNLVTLSILINCFCHLGQMAFSFSLLGKIL 72

Query: 466 QKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTS 525
           + G  P  +T++ ++ GLC KG+++K   F   +       N V++ TL++G  +  +T 
Sbjct: 73  KLGYXPNTITWTTLMKGLCLKGEVKKLLHFHDKVVAQAFQTNQVSYGTLLNGLCKTGETR 132

Query: 526 KVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
             ++LL +M E +R+  P+   +S ++D L KD+  +E
Sbjct: 133 CAIKLL-RMIE-DRSTRPNVVMYSAIIDGLCKDKLVNE 168


>gi|302781560|ref|XP_002972554.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
 gi|300160021|gb|EFJ26640.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
          Length = 581

 Score =  278 bits (711), Expect = 7e-72,   Method: Compositional matrix adjust.
 Identities = 162/521 (31%), Positives = 285/521 (54%), Gaps = 30/521 (5%)

Query: 54  INLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYR-KLVSIGLLPDFLT 112
           +NL   ++FF   +    S  ++ +N++  ++ +       +  +R ++   G+ P  +T
Sbjct: 28  VNLCPLKFFFVRSS----SRSVADYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVT 83

Query: 113 LNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVAL 172
            N +IN       GLC  N +     LF+ ++  G  PDV+TY TLI+  C+ G+L  A 
Sbjct: 84  YNTIIN-------GLCKSNELGAGMELFEELVKRGHHPDVVTYNTLIDSLCKAGDLEEAR 136

Query: 173 RLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGIN--PAVVV 230
           RLH  M S     G +   N+ +YS++I+ LCK G +D+A+EL  EM  +  +  P ++ 
Sbjct: 137 RLHGGMSS----RGCVP--NVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIIT 190

Query: 231 CTTLIHGFCCAGNWEEVNGLFIEMLDLGPR--PNLLTFNVMIDCLCKGGKINEANGLLEL 288
             + + G C      E   L   + D   R  P+ +TF+ +ID LCK G+ +EA    + 
Sbjct: 191 YNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACN--DD 248

Query: 289 MIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILN 348
           MI  G  P+  TYN+L++G C   +++ A  +  SM  KG    V++Y++L++ +CK   
Sbjct: 249 MIAGGYVPNVVTYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASR 308

Query: 349 VEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYN--VEPDLSTY 406
           V+EA+ L   + S G    V+T+N+++ GL ++ ++G A ++   +++YN  + PD  T+
Sbjct: 309 VDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQI--ALQVYNRMLVPDKVTF 366

Query: 407 NILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQ 466
           NILI G CK    ++A  LF  +     +  +  F  LIDGLCKAG+++ A ++   +  
Sbjct: 367 NILIAGACKAGNFEQASALFEEMVAKNMQPDVMTFGALIDGLCKAGQVEAARDILDLMGN 426

Query: 467 KGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSK 526
            G+ P VVTY++++HGLC+ G++E+  +FL  M  +GC P  +T+ +L++   + ++T  
Sbjct: 427 LGVPPNVVTYNVLVHGLCKSGRIEEPCEFLEEMVSSGCVPESMTYGSLVYALCRASRTDD 486

Query: 527 VVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAV 567
            ++L+ K+     +  PD  T++I+VD L K  K  +   V
Sbjct: 487 ALQLVSKLKSFGWD--PDTVTYNILVDGLWKSGKTEQAITV 525



 Score =  271 bits (694), Expect = 6e-70,   Method: Compositional matrix adjust.
 Identities = 156/510 (30%), Positives = 262/510 (51%), Gaps = 18/510 (3%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
           N  L   C++G         F G M     +P I ++N +   + K+    A +  + +L
Sbjct: 49  NIVLQSLCRAGE-TARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELFEEL 107

Query: 102 VSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLING 161
           V  G  PD +T N LI+        LC    ++EA  L   M + G  P+V+TY  LING
Sbjct: 108 VKRGHHPDVVTYNTLID-------SLCKAGDLEEARRLHGGMSSRGCVPNVVTYSVLING 160

Query: 162 FCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKG 221
            C+ G +  A  L ++M     +       NI +Y+  +D LCK+ +  +A EL   ++ 
Sbjct: 161 LCKVGRIDEARELIQEMTRKSCD----VLPNIITYNSFLDGLCKQSMTAEACELMRSLRD 216

Query: 222 RG--INPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKI 279
               ++P  V  +TLI G C  G  +E      +M+  G  PN++T+N +++ LCK  K+
Sbjct: 217 GSLRVSPDTVTFSTLIDGLCKCGQTDEACN--DDMIAGGYVPNVVTYNALVNGLCKADKM 274

Query: 280 NEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNIL 339
             A+ ++E M+ +G+ PD  TY+ L+D +C   R+D A E+   M S+GC   VV++N +
Sbjct: 275 ERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSI 334

Query: 340 INGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNV 399
           I+G CK     EA  +  Q+ +  +    +T+N L++G  +AG    A  LF+EM   N+
Sbjct: 335 IDGLCKSDRSGEAFQIALQVYNRMLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNM 394

Query: 400 EPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWE 459
           +PD+ T+  LIDGLCK   V+ A  +  ++        +  +N L+ GLCK+GR++   E
Sbjct: 395 QPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNVLVHGLCKSGRIEEPCE 454

Query: 460 LFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFL 519
              ++   G VP  +TY  +++ LCR  + + A   +  ++  G  P+ VT+N L+ G  
Sbjct: 455 FLEEMVSSGCVPESMTYGSLVYALCRASRTDDALQLVSKLKSFGWDPDTVTYNILVDGLW 514

Query: 520 QNNKTSKVVELLHKMAEPERNLVPDDTTFS 549
           ++ KT + + +L +M    +   PD  TF+
Sbjct: 515 KSGKTEQAITVLEEMV--GKGHQPDSFTFA 542



 Score =  209 bits (531), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 134/478 (28%), Positives = 235/478 (49%), Gaps = 21/478 (4%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
           N  +   CK+G  +L EAR   G M+     P + ++++L   + K    D      +++
Sbjct: 120 NTLIDSLCKAG--DLEEARRLHGGMSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQEM 177

Query: 102 V--SIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMI--AFGVRPDVITYGT 157
              S  +LP+ +T N  ++       GLC ++   EA  L +++   +  V PD +T+ T
Sbjct: 178 TRKSCDVLPNIITYNSFLD-------GLCKQSMTAEACELMRSLRDGSLRVSPDTVTFST 230

Query: 158 LINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFL 217
           LI+G C+ G    A   +  M++G Y        N+ +Y+ +++ LCK   +++A  +  
Sbjct: 231 LIDGLCKCGQTDEAC--NDDMIAGGY------VPNVVTYNALVNGLCKADKMERAHAMIE 282

Query: 218 EMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGG 277
            M  +G+ P V+  + L+  FC A   +E   L   M   G  PN++TFN +ID LCK  
Sbjct: 283 SMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSD 342

Query: 278 KINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYN 337
           +  EA  +   +  R L PD+ T+N L+ G C  G  + A  +F  M +K  +  V+++ 
Sbjct: 343 RSGEAFQIALQVYNRMLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNMQPDVMTFG 402

Query: 338 ILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLY 397
            LI+G CK   VE A  +   + + GV   V+TYN L+ GL ++G+     +  +EM   
Sbjct: 403 ALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNVLVHGLCKSGRIEEPCEFLEEMVSS 462

Query: 398 NVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNA 457
              P+  TY  L+  LC+ +   +A++L   L+   ++     +N L+DGL K+G+ + A
Sbjct: 463 GCVPESMTYGSLVYALCRASRTDDALQLVSKLKSFGWDPDTVTYNILVDGLWKSGKTEQA 522

Query: 458 WELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLM 515
             +  ++  KG  P   T++    GL R G L    + L  +   G  P+  T ++++
Sbjct: 523 ITVLEEMVGKGHQPDSFTFAACFGGLHRSGNLAGTMELLRVVLAKGMLPDATTCSSIL 580



 Score =  178 bits (452), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 104/315 (33%), Positives = 172/315 (54%), Gaps = 15/315 (4%)

Query: 266 FNVMIDCLCKGGKINEANGLLEL----MIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIF 321
           +N+++  LC+ G+   A   LE+    M + G+ P   TYN++++G C    +    E+F
Sbjct: 48  YNIVLQSLCRAGETARA---LEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELF 104

Query: 322 LSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQA 381
             +  +G    VV+YN LI+  CK  ++EEA  L+  + S G    V+TY+ L++GL + 
Sbjct: 105 EELVKRGHHPDVVTYNTLIDSLCKAGDLEEARRLHGGMSSRGCVPNVVTYSVLINGLCKV 164

Query: 382 GQAGYAQKLFDEM--KLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIE 439
           G+   A++L  EM  K  +V P++ TYN  +DGLCK +   EA +L   L         +
Sbjct: 165 GRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPD 224

Query: 440 I--FNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLL 497
              F+ LIDGLCK G+ D A      +   G VP VVTY+ +++GLC+  K+E+A+  + 
Sbjct: 225 TVTFSTLIDGLCKCGQTDEACN--DDMIAGGYVPNVVTYNALVNGLCKADKMERAHAMIE 282

Query: 498 YMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAK 557
            M   G  P+V+T++ L+  F + ++  + +ELLH MA   R   P+  TF+ ++D L K
Sbjct: 283 SMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMAS--RGCTPNVVTFNSIIDGLCK 340

Query: 558 DEKYHECSAVSKSSY 572
            ++  E   ++   Y
Sbjct: 341 SDRSGEAFQIALQVY 355



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 107/395 (27%), Positives = 189/395 (47%), Gaps = 30/395 (7%)

Query: 24  LFKSPRQIAAVSSPET-QLNEFLHENCKSGIIN--LNEARYFFGYMTHMQPSPPISSFNL 80
           L +S R  +   SP+T   +  +   CK G  +   N+     GY+      P + ++N 
Sbjct: 210 LMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNDDMIAGGYV------PNVVTYNA 263

Query: 81  LFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLF 140
           L   + K    +   +    +V  G+ PD +T ++L++ F       C  +R+ EA  L 
Sbjct: 264 LVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAF-------CKASRVDEALELL 316

Query: 141 KNMIAFGVRPDVITYGTLINGFCRTGN----LSVALRLHKKMVSGDYENGLISKTNIFSY 196
             M + G  P+V+T+ ++I+G C++        +AL+++ +M+  D            ++
Sbjct: 317 HGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQIALQVYNRMLVPDK----------VTF 366

Query: 197 SIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLD 256
           +I+I   CK G  ++A  LF EM  + + P V+    LI G C AG  E    +   M +
Sbjct: 367 NILIAGACKAGNFEQASALFEEMVAKNMQPDVMTFGALIDGLCKAGQVEAARDILDLMGN 426

Query: 257 LGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDT 316
           LG  PN++T+NV++  LCK G+I E    LE M+  G  P+  TY SL+   C   R D 
Sbjct: 427 LGVPPNVVTYNVLVHGLCKSGRIEEPCEFLEEMVSSGCVPESMTYGSLVYALCRASRTDD 486

Query: 317 AREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLS 376
           A ++   + S G     V+YNIL++G  K    E+A+++  +++  G +    T+     
Sbjct: 487 ALQLVSKLKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFG 546

Query: 377 GLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILID 411
           GL ++G      +L   +    + PD +T + ++D
Sbjct: 547 GLHRSGNLAGTMELLRVVLAKGMLPDATTCSSILD 581



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 54/178 (30%), Positives = 94/178 (52%), Gaps = 1/178 (0%)

Query: 403 LSTYNILIDGLCKNNCVQEAVKLFH-MLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELF 461
           ++ YNI++  LC+      A+++F   +  +     I  +N +I+GLCK+  L    ELF
Sbjct: 45  VADYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELF 104

Query: 462 HKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQN 521
            +L ++G  P VVTY+ +I  LC+ G LE+A      M   GC PNVVT++ L++G  + 
Sbjct: 105 EELVKRGHHPDVVTYNTLIDSLCKAGDLEEARRLHGGMSSRGCVPNVVTYSVLINGLCKV 164

Query: 522 NKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKSSYRACLYVT 579
            +  +  EL+ +M     +++P+  T++  +D L K     E   + +S     L V+
Sbjct: 165 GRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVS 222


>gi|224131362|ref|XP_002328520.1| predicted protein [Populus trichocarpa]
 gi|222838235|gb|EEE76600.1| predicted protein [Populus trichocarpa]
          Length = 501

 Score =  278 bits (710), Expect = 8e-72,   Method: Compositional matrix adjust.
 Identities = 157/427 (36%), Positives = 241/427 (56%), Gaps = 8/427 (1%)

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
           I +A   F  MI    RP  +  G  +    +    S  + L  +M      +      N
Sbjct: 67  IDDAMASFYRMIHMNPRPSFVELGKFLGSIAKKKQYSTVVSLCNQM------DLFGVAHN 120

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
            ++ +I+I+SLC+   +  A  +  +M   GI P  V  TTLI+G C  G  +E   LF 
Sbjct: 121 DYTLNILINSLCRLSHIHFAVSVLSKMFKLGIQPDSVTFTTLINGLCNEGRIKEAVELFN 180

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
           EM      PN +TF +++D LCK G ++EA  + E M ++G+ P+ +TYN+LM+GYCL  
Sbjct: 181 EMAGRDAMPNTVTFTILVDVLCKKGMVSEARCVFETMTEKGVEPNIYTYNALMNGYCLRL 240

Query: 313 RIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYN 372
            ++ A ++F  M  KGC  +V SY+ILINGYCK   ++EA +L  Q+    +    +TYN
Sbjct: 241 EMNDASKVFEIMVGKGCAPSVHSYSILINGYCKSRRIDEAKALLTQMSEKELIPNTVTYN 300

Query: 373 TLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMN 432
           TL+ GL  A     AQ+LF +M    + P+L TY+IL+DGLCK+  ++EA+KL   ++  
Sbjct: 301 TLMQGLCHASSLLEAQELFKKMCSSGMLPNLRTYSILLDGLCKHGHLEEALKLLTSMQER 360

Query: 433 KFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKA 492
           K E  I ++N LI G+  AG+L+ A ELF KL   G+ P+V TY+IMI GL ++G  ++A
Sbjct: 361 KLEPDIVLYNILIQGMFIAGKLEVAKELFSKLFANGIRPSVRTYNIMIKGLLKEGLSDEA 420

Query: 493 NDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVV 552
                 ME +G  P+  ++N ++ GFLQN   S  ++L+ +M    R    D +TF +++
Sbjct: 421 YKLFRKMEDDGFLPDSCSYNVIIQGFLQNQDPSTAIQLIDEMV--GRRFSADSSTFKMLL 478

Query: 553 DLLAKDE 559
           DL + DE
Sbjct: 479 DLESHDE 485



 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 129/430 (30%), Positives = 222/430 (51%), Gaps = 13/430 (3%)

Query: 51  SGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDF 110
           S  I +++A   F  M HM P P         G++AK + Y  V+S   ++   G+  + 
Sbjct: 62  SNDIGIDDAMASFYRMIHMNPRPSFVELGKFLGSIAKKKQYSTVVSLCNQMDLFGVAHND 121

Query: 111 LTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSV 170
            TLNILIN        LC  + I  A  +   M   G++PD +T+ TLING C  G +  
Sbjct: 122 YTLNILIN-------SLCRLSHIHFAVSVLSKMFKLGIQPDSVTFTTLINGLCNEGRIKE 174

Query: 171 ALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVV 230
           A+ L  +M   D      +  N  +++I++D LCK+G+V +A+ +F  M  +G+ P +  
Sbjct: 175 AVELFNEMAGRD------AMPNTVTFTILVDVLCKKGMVSEARCVFETMTEKGVEPNIYT 228

Query: 231 CTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMI 290
              L++G+C      + + +F  M+  G  P++ +++++I+  CK  +I+EA  LL  M 
Sbjct: 229 YNALMNGYCLRLEMNDASKVFEIMVGKGCAPSVHSYSILINGYCKSRRIDEAKALLTQMS 288

Query: 291 QRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVE 350
           ++ L P+  TYN+LM G C    +  A+E+F  M S G    + +Y+IL++G CK  ++E
Sbjct: 289 EKELIPNTVTYNTLMQGLCHASSLLEAQELFKKMCSSGMLPNLRTYSILLDGLCKHGHLE 348

Query: 351 EAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILI 410
           EA+ L   +    +   ++ YN L+ G+F AG+   A++LF ++    + P + TYNI+I
Sbjct: 349 EALKLLTSMQERKLEPDIVLYNILIQGMFIAGKLEVAKELFSKLFANGIRPSVRTYNIMI 408

Query: 411 DGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLV 470
            GL K     EA KLF  +E + F      +N +I G  +      A +L  ++  +   
Sbjct: 409 KGLLKEGLSDEAYKLFRKMEDDGFLPDSCSYNVIIQGFLQNQDPSTAIQLIDEMVGRRFS 468

Query: 471 PTVVTYSIMI 480
               T+ +++
Sbjct: 469 ADSSTFKMLL 478



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 73/253 (28%), Positives = 125/253 (49%), Gaps = 13/253 (5%)

Query: 54  INLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTL 113
           + +N+A   F  M     +P + S+++L     K+R  D   +   ++    L+P+ +T 
Sbjct: 240 LEMNDASKVFEIMVGKGCAPSVHSYSILINGYCKSRRIDEAKALLTQMSEKELIPNTVTY 299

Query: 114 NILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALR 173
           N L+       +GLC  + + EA  LFK M + G+ P++ TY  L++G C+ G+L  AL+
Sbjct: 300 NTLM-------QGLCHASSLLEAQELFKKMCSSGMLPNLRTYSILLDGLCKHGHLEEALK 352

Query: 174 LHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTT 233
           L   M     E       +I  Y+I+I  +   G ++ AKELF ++   GI P+V     
Sbjct: 353 LLTSMQERKLE------PDIVLYNILIQGMFIAGKLEVAKELFSKLFANGIRPSVRTYNI 406

Query: 234 LIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRG 293
           +I G    G  +E   LF +M D G  P+  ++NV+I    +    + A  L++ M+ R 
Sbjct: 407 MIKGLLKEGLSDEAYKLFRKMEDDGFLPDSCSYNVIIQGFLQNQDPSTAIQLIDEMVGRR 466

Query: 294 LNPDRFTYNSLMD 306
            + D  T+  L+D
Sbjct: 467 FSADSSTFKMLLD 479



 Score = 58.9 bits (141), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 55/199 (27%), Positives = 94/199 (47%), Gaps = 14/199 (7%)

Query: 412 GLCKNNC----VQEAVKLFH-MLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQ 466
           G   NN     + +A+  F+ M+ MN     +E+    +  + K  +      L +++  
Sbjct: 56  GFVSNNSNDIGIDDAMASFYRMIHMNPRPSFVEL-GKFLGSIAKKKQYSTVVSLCNQMDL 114

Query: 467 KGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSK 526
            G+     T +I+I+ LCR   +  A   L  M K G  P+ VTF TL++G     +  +
Sbjct: 115 FGVAHNDYTLNILINSLCRLSHIHFAVSVLSKMFKLGIQPDSVTFTTLINGLCNEGRIKE 174

Query: 527 VVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKSSYRACLYVTIFQPSSL 586
            VEL ++MA   R+ +P+  TF+I+VD+L K     E   V ++     +   I+  ++L
Sbjct: 175 AVELFNEMAG--RDAMPNTVTFTILVDVLCKKGMVSEARCVFETMTEKGVEPNIYTYNAL 232

Query: 587 GSMIGCTVRLMPQPEMSDT 605
             M G  +RL    EM+D 
Sbjct: 233 --MNGYCLRL----EMNDA 245


>gi|302787647|ref|XP_002975593.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
 gi|300156594|gb|EFJ23222.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
          Length = 471

 Score =  278 bits (710), Expect = 9e-72,   Method: Compositional matrix adjust.
 Identities = 155/466 (33%), Positives = 254/466 (54%), Gaps = 14/466 (3%)

Query: 72  SPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVEN 131
           SP   +F ++  +  K          + +++  G+ PD +  NILI+ +  K        
Sbjct: 5   SPNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKK-------G 57

Query: 132 RIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKT 191
           R+ EA  L++ M++ G+ P + TY +L+N FC+   +  A+ L K M    +E       
Sbjct: 58  RVDEANRLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFE------P 111

Query: 192 NIFSYSIIIDSLCKEGLVDKAKE-LFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGL 250
           ++ +YS II  LCK G V +A E LF +M  RG +   V    LI+G C   N E    L
Sbjct: 112 DVVTYSTIISGLCKTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKL 171

Query: 251 FIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCL 310
             EM   G  P+ +T+N ++  LC+ GK++EA    + M  RG +PD   YN L+D    
Sbjct: 172 LEEMASKGYVPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYK 231

Query: 311 VGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVIT 370
            G+ D A ++F  + +KG     V+YN ++ G  +  N++EA  ++++++++G      T
Sbjct: 232 EGKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGAT 291

Query: 371 YNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLE 430
           Y+ +LSG  +A +   A K+ +EM      PD+ TYNIL+DGLCK N V +A +LF  + 
Sbjct: 292 YSIVLSGHCRAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMV 351

Query: 431 MNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLE 490
            N     I  ++ +++GLCK  ++ +A  LF ++ ++ LVP VVT++I++ GLC+ GKL+
Sbjct: 352 DNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLD 411

Query: 491 KANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAE 536
           +A D L  M  +GCAP+ V +NTLM+G  +  +  +   L   M E
Sbjct: 412 EAKDLLDQMTCSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAMKE 457



 Score =  265 bits (677), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 152/457 (33%), Positives = 238/457 (52%), Gaps = 18/457 (3%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CK G   L +    F  M     SP    +N+L    AK    D     Y ++VS+GL P
Sbjct: 19  CKQG--KLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANRLYEEMVSVGLEP 76

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
              T N L+N F       C E ++KEA  LFK M   G  PDV+TY T+I+G C+TG +
Sbjct: 77  SIYTYNSLLNAF-------CKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLCKTGKV 129

Query: 169 SVALRL--HKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINP 226
           + AL +  HK +  G          N  +Y+ +I+ LCK+  +++A +L  EM  +G  P
Sbjct: 130 TEALEMLFHKMIERG-------CSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVP 182

Query: 227 AVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLL 286
             +   T++ G C  G   E    F  M   G  P+++ +N ++D L K GK +EA  L 
Sbjct: 183 DNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLF 242

Query: 287 ELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKI 346
           + +I +G  PD  TYNS++ G      +D A E+F  M + GC     +Y+I+++G+C+ 
Sbjct: 243 KDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRA 302

Query: 347 LNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTY 406
             V++A  +  ++   G    V+TYN LL GL +      A +LF  M      PD+ +Y
Sbjct: 303 KKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSY 362

Query: 407 NILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQ 466
           +++++GLCK N V +A  LF  +   K    +  FN L+DGLCKAG+LD A +L  ++  
Sbjct: 363 SVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMTC 422

Query: 467 KGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNG 503
            G  P  V Y+ +++GL ++G+  +A+     M++ G
Sbjct: 423 SGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAMKEKG 459



 Score =  238 bits (607), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 135/415 (32%), Positives = 232/415 (55%), Gaps = 9/415 (2%)

Query: 150 PDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLV 209
           P+  T+  ++  FC+ G L    +L ++M+    +NG IS   I  Y+I+ID   K+G V
Sbjct: 6   PNRYTFRVVLKSFCKQGKLRDGYKLFEQML----DNG-ISPDGI-EYNILIDGYAKKGRV 59

Query: 210 DKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVM 269
           D+A  L+ EM   G+ P++    +L++ FC     +E   LF  M + G  P+++T++ +
Sbjct: 60  DEANRLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTI 119

Query: 270 IDCLCKGGKINEA-NGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKG 328
           I  LCK GK+ EA   L   MI+RG + +   YN+L++G C    I+ A ++   M SKG
Sbjct: 120 ISGLCKTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKG 179

Query: 329 CKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQ 388
                ++YN +++G C++  V EA   +  + S G    V+ YN LL  L++ G+   A 
Sbjct: 180 YVPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAM 239

Query: 389 KLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGL 448
           KLF ++      PD  TYN ++ GL + + + EA ++F  +  +        ++ ++ G 
Sbjct: 240 KLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGH 299

Query: 449 CKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNV 508
           C+A ++D+A ++  ++ + G VP VVTY+I++ GLC+   ++KA++    M  NGCAP++
Sbjct: 300 CRAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDI 359

Query: 509 VTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
           V+++ +++G  + NK      L  +M E  R LVPD  TF+I++D L K  K  E
Sbjct: 360 VSYSVVLNGLCKTNKVHDARVLFDRMIE--RKLVPDVVTFNILMDGLCKAGKLDE 412



 Score =  208 bits (529), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 124/378 (32%), Positives = 183/378 (48%), Gaps = 38/378 (10%)

Query: 222 RGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINE 281
           R  +P       ++  FC  G   +   LF +MLD G  P+ + +N++ID   K G+++E
Sbjct: 2   RECSPNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDE 61

Query: 282 ANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSK-------------- 327
           AN L E M+  GL P  +TYNSL++ +C   ++  A E+F +M  K              
Sbjct: 62  ANRLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIIS 121

Query: 328 ----------------------GCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVR 365
                                 GC    V+YN LING CK  N+E A  L  ++ S G  
Sbjct: 122 GLCKTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYV 181

Query: 366 QTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKL 425
              ITYNT+LSGL + G+   A++ FD M      PD+  YN L+D L K     EA+KL
Sbjct: 182 PDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKL 241

Query: 426 FHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCR 485
           F  +    +      +N ++ GL +   +D A E+F K+   G  P   TYSI++ G CR
Sbjct: 242 FKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCR 301

Query: 486 KGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDD 545
             K++ A+  L  M K G  P+VVT+N L+ G  + N   K  EL   M   +    PD 
Sbjct: 302 AKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMV--DNGCAPDI 359

Query: 546 TTFSIVVDLLAKDEKYHE 563
            ++S+V++ L K  K H+
Sbjct: 360 VSYSVVLNGLCKTNKVHD 377



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 78/286 (27%), Positives = 129/286 (45%), Gaps = 36/286 (12%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
           N  L   C+ G   ++EA+ FF  M     SP + ++N L  A+ K    D  +  ++ +
Sbjct: 188 NTILSGLCRMG--KVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDV 245

Query: 102 VSIGLLPDFLTLNILINCFGNKER----------------------------GLCVENRI 133
           ++ G +PD +T N ++     K                              G C   ++
Sbjct: 246 IAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKV 305

Query: 134 KEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNI 193
            +A  + + M   G  PDV+TY  L++G C+T  +  A  L   MV    +NG     +I
Sbjct: 306 DDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMV----DNGCAP--DI 359

Query: 194 FSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIE 253
            SYS++++ LCK   V  A+ LF  M  R + P VV    L+ G C AG  +E   L  +
Sbjct: 360 VSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQ 419

Query: 254 MLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRF 299
           M   G  P+ + +N +++ L K G+  +A+ L + M ++G   D F
Sbjct: 420 MTCSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAMKEKGFLSDCF 465


>gi|83744086|gb|ABC42329.1| PPR protein [Oryza sativa Indica Group]
          Length = 761

 Score =  276 bits (707), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 162/472 (34%), Positives = 251/472 (53%), Gaps = 12/472 (2%)

Query: 94  VISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVI 153
            I F +K+ S G+ PD L  +I   C     +G   +  +     L   M+  G+ PD  
Sbjct: 285 AIGFLKKVRSDGVEPDGLEPDIATYC--TLLQGYATKGALVGMHALLDLMVRNGIHPDHY 342

Query: 154 TYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAK 213
            Y  LI  + + G +  A+ +  KM     + GL    +  +Y  +I  LCK G V+ A 
Sbjct: 343 VYNILICAYAKQGKVDEAMLVFSKM----RQQGL--NPDAVTYGAVIGILCKSGRVEDAM 396

Query: 214 ELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCL 273
             F +M   G++P  +V  +LIHG C    WE    L +EMLD G   N + FN +ID  
Sbjct: 397 LYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSH 456

Query: 274 CKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTV 333
           CK G++ E+  L +LM++ G+ PD  TY++L+DGYCL G++D A ++   M S G K   
Sbjct: 457 CKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNT 516

Query: 334 VSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDE 393
           V+Y  LINGYCKI  + +A+ L++++ S+GV   +ITYN +L GLFQ  +   A++L+  
Sbjct: 517 VTYRTLINGYCKISRMGDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVR 576

Query: 394 MKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGR 453
           +     + +LSTYNI++ GLCKN    +A+++F  L +   +     FN +ID L K GR
Sbjct: 577 ITESGTQIELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGR 636

Query: 454 LDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNT 513
              A +LF      GLVP   TY +M   +  +G LE+ +   L ME NGC  +    N 
Sbjct: 637 NGEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNF 696

Query: 514 LMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLA--KDEKYHE 563
           ++   LQ  + ++    L  + E   +L  + +T S+ +DLL+  K ++YH 
Sbjct: 697 IVRELLQRGEITRAGTYLSMIDEKHFSL--EASTASLFIDLLSGGKYQEYHR 746



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 154/566 (27%), Positives = 259/566 (45%), Gaps = 73/566 (12%)

Query: 57  NEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIG---LLPDFLTL 113
            +AR+ F  +        I   N     VA++    A +S Y ++   G   + P   T 
Sbjct: 32  EDARHVFDELLRRGRGASIYGLNRALADVARHSPA-AAVSRYNRMARAGAGKVTPTVHTY 90

Query: 114 NILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALR 173
            ILI C        C  +R+        N++  G R + IT+  L+ G C     S A+ 
Sbjct: 91  AILIGC-------CCRADRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMD 143

Query: 174 LHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKEL---FLEMKGRGINPAVVV 230
           +  + ++      L    ++FS +I++  LC E    +A EL     + +G G  P VV 
Sbjct: 144 IVLRRMTE-----LSCMPDVFSCTILLKGLCDENRSQEALELPHMMADGRGGGSAPDVVS 198

Query: 231 CTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMI 290
            TT+I+GF   G+  +    + EMLD    P+++T++ +I  LCKG  +++A  +L  M+
Sbjct: 199 YTTVINGFFKEGDSGKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTSMV 258

Query: 291 QRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCK-------------------- 330
           + G+ P+  TY S+M GYC  G+   A      + S G +                    
Sbjct: 259 KNGVMPNCRTYTSIMHGYCSSGQPKEAIGFLKKVRSDGVEPDGLEPDIATYCTLLQGYAT 318

Query: 331 -------HTVVS-------------YNILINGYCKILNVEEAMSLYRQIISNGVRQTVIT 370
                  H ++              YNILI  Y K   V+EAM ++ ++   G+    +T
Sbjct: 319 KGALVGMHALLDLMVRNGIHPDHYVYNILICAYAKQGKVDEAMLVFSKMRQQGLNPDAVT 378

Query: 371 YNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLE 430
           Y  ++  L ++G+   A   F++M    + P    YN LI GLC  N  + A +L  +LE
Sbjct: 379 YGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEEL--ILE 436

Query: 431 MNKFEFGIEI----FNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRK 486
           M   + GI +    FN +ID  CK GR+  + +LF  + + G+ P ++TYS +I G C  
Sbjct: 437 M--LDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLA 494

Query: 487 GKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDT 546
           GK+++A   L  M   G  PN VT+ TL++G+ + ++    + L  +M      + PD  
Sbjct: 495 GKMDEAMKLLSGMVSVGLKPNTVTYRTLINGYCKISRMGDALVLFKEMESS--GVSPDII 552

Query: 547 TFSIVVDLLAKDEKYHECSAVSKSSY 572
           T++I++  L +  +    +A +K  Y
Sbjct: 553 TYNIILQGLFQTRR----TAAAKELY 574



 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 60/253 (23%), Positives = 114/253 (45%), Gaps = 15/253 (5%)

Query: 55  NLNEARYFFGYMTHMQPSPPISSFNLLFGAVAK-NRHYDAVISFYRKLVSIGLLPDFLTL 113
            ++EA      M  +   P   ++  L     K +R  DA++ F +++ S G+ PD +T 
Sbjct: 496 KMDEAMKLLSGMVSVGLKPNTVTYRTLINGYCKISRMGDALVLF-KEMESSGVSPDIITY 554

Query: 114 NILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALR 173
           NI++       +GL    R   A  L+  +   G + ++ TY  +++G C+      ALR
Sbjct: 555 NIIL-------QGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALR 607

Query: 174 LHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTT 233
           + + +   D       K    +++I+ID+L K G   +AK+LF+     G+ P       
Sbjct: 608 MFQNLCLMDL------KLEARTFNIMIDALLKVGRNGEAKDLFVAFSSNGLVPNYWTYRL 661

Query: 234 LIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRG 293
           +       G  EE++ LF+ M D G   +    N ++  L + G+I  A   L ++ ++ 
Sbjct: 662 MAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKH 721

Query: 294 LNPDRFTYNSLMD 306
            + +  T +  +D
Sbjct: 722 FSLEASTASLFID 734



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 41/175 (23%), Positives = 80/175 (45%), Gaps = 15/175 (8%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CK  I  + +A   F  M     SP I ++N++   + + R   A    Y ++   G   
Sbjct: 527 CK--ISRMGDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQI 584

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           +  T NI+++       GLC      +A  +F+N+    ++ +  T+  +I+   + G  
Sbjct: 585 ELSTYNIILH-------GLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRN 637

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRG 223
             A  L     S    NGL+   N ++Y ++ +++  +GL+++  +LFL M+  G
Sbjct: 638 GEAKDLFVAFSS----NGLVP--NYWTYRLMAENIIGQGLLEELDQLFLSMEDNG 686


>gi|115487378|ref|NP_001066176.1| Os12g0152600 [Oryza sativa Japonica Group]
 gi|77553036|gb|ABA95832.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113648683|dbj|BAF29195.1| Os12g0152600 [Oryza sativa Japonica Group]
 gi|125535802|gb|EAY82290.1| hypothetical protein OsI_37500 [Oryza sativa Indica Group]
 gi|125578525|gb|EAZ19671.1| hypothetical protein OsJ_35247 [Oryza sativa Japonica Group]
          Length = 716

 Score =  276 bits (707), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 163/504 (32%), Positives = 257/504 (50%), Gaps = 18/504 (3%)

Query: 63  FGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGN 122
           F  M H    P I   NL+  A+     +D + S Y +++ +G+ P  +T N L++ F  
Sbjct: 184 FREMAHHGVPPFIKECNLVLRALRDEARWDDMRSVYAEMLQLGIEPSIVTYNTLLDSFFR 243

Query: 123 KERGLCVENRIKEATWLFKNMIAF--GVRPDVITYGTLINGFCRTGNLSVALRLHKKMVS 180
                  E R+ +A  L + M A   G  P  +TY  +ING  R G L  A +L  +M  
Sbjct: 244 -------EGRVDQAAKLLREMEARPGGCLPSDVTYNVVINGLARKGELEKAAQLVDRMR- 295

Query: 181 GDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCC 240
                 +  K + F+++ +I      G V+KA  L LEM+  GI P VV   T+IHG   
Sbjct: 296 ------MSKKASAFTFNPLITGYFARGSVEKAGALQLEMENEGIVPTVVTYNTIIHGMFR 349

Query: 241 AGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFT 300
           +GN E     F+EM  +G  P+L+T+N +I+  CK G + EA  L   + + GL P   T
Sbjct: 350 SGNVEAARMKFVEMRAMGLLPDLITYNSLINGYCKAGNLKEALWLFGDLKRAGLAPSVLT 409

Query: 301 YNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQII 360
           YN L+DGYC +G ++ AR     M  +GC+  V +Y IL+NG  K+ N+      + +++
Sbjct: 410 YNILLDGYCRLGDLEEARRFKQEMVEQGCQPDVSTYTILMNGSRKVRNLAMVREFFDEML 469

Query: 361 SNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQ 420
           S G++     YNT +S     G    A +L + M    +  D  TYNI +DGLCK+  ++
Sbjct: 470 SKGLQPDCFAYNTRISAELILGSTSEAFQLTEVMISRGISSDTVTYNIFLDGLCKSGNLK 529

Query: 421 EAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMI 480
           +A  L+  +  +  +     + CLI   C+ GRL  A ++F  +   GL P+ VTY++ I
Sbjct: 530 DAYVLWMKMVSDGLQPDCITYTCLIHAHCERGRLREARDIFDGMLVSGLPPSAVTYTVFI 589

Query: 481 HGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERN 540
           H  CR+G L  A  +   M + G  PN VT+N L+H   +  +T+   +  H+M   ER 
Sbjct: 590 HAYCRRGNLYSAYGWFQKMLEEGVRPNEVTYNVLIHALCRMGRTNLAYQHFHEML--ERG 647

Query: 541 LVPDDTTFSIVVDLLAKDEKYHEC 564
           L P+  T+++++D   K+  + E 
Sbjct: 648 LSPNKYTYTLLIDGNCKEGNWEEA 671



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 110/355 (30%), Positives = 178/355 (50%), Gaps = 16/355 (4%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
           N  ++  CK+G  NL EA + FG +     +P + ++N+L     +    +    F +++
Sbjct: 376 NSLINGYCKAG--NLKEALWLFGDLKRAGLAPSVLTYNILLDGYCRLGDLEEARRFKQEM 433

Query: 102 VSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLING 161
           V  G  PD  T  IL+N    K R L +   ++E    F  M++ G++PD   Y T I+ 
Sbjct: 434 VEQGCQPDVSTYTILMNG-SRKVRNLAM---VRE---FFDEMLSKGLQPDCFAYNTRISA 486

Query: 162 FCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKG 221
               G+ S A +L + M+S     G+ S T   +Y+I +D LCK G +  A  L+++M  
Sbjct: 487 ELILGSTSEAFQLTEVMIS----RGISSDT--VTYNIFLDGLCKSGNLKDAYVLWMKMVS 540

Query: 222 RGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINE 281
            G+ P  +  T LIH  C  G   E   +F  ML  G  P+ +T+ V I   C+ G +  
Sbjct: 541 DGLQPDCITYTCLIHAHCERGRLREARDIFDGMLVSGLPPSAVTYTVFIHAYCRRGNLYS 600

Query: 282 ANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILIN 341
           A G  + M++ G+ P+  TYN L+   C +GR + A + F  M  +G      +Y +LI+
Sbjct: 601 AYGWFQKMLEEGVRPNEVTYNVLIHALCRMGRTNLAYQHFHEMLERGLSPNKYTYTLLID 660

Query: 342 GYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKL 396
           G CK  N EEA+ LY ++  +G+     T+N L  G F  GQ+ +A +  + + L
Sbjct: 661 GNCKEGNWEEAIRLYSEMHQHGIHPDHCTHNALFKG-FDEGQSKHAIQYMENVVL 714



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 99/370 (26%), Positives = 178/370 (48%), Gaps = 36/370 (9%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
           P + ++N +   + ++ + +A    + ++ ++GLLPD +T N LIN       G C    
Sbjct: 335 PTVVTYNTIIHGMFRSGNVEAARMKFVEMRAMGLLPDLITYNSLIN-------GYCKAGN 387

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSG----------- 181
           +KEA WLF ++   G+ P V+TY  L++G+CR G+L  A R  ++MV             
Sbjct: 388 LKEALWLFGDLKRAGLAPSVLTYNILLDGYCRLGDLEEARRFKQEMVEQGCQPDVSTYTI 447

Query: 182 ---------------DYENGLISK---TNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRG 223
                          ++ + ++SK    + F+Y+  I +    G   +A +L   M  RG
Sbjct: 448 LMNGSRKVRNLAMVREFFDEMLSKGLQPDCFAYNTRISAELILGSTSEAFQLTEVMISRG 507

Query: 224 INPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEAN 283
           I+   V     + G C +GN ++   L+++M+  G +P+ +T+  +I   C+ G++ EA 
Sbjct: 508 ISSDTVTYNIFLDGLCKSGNLKDAYVLWMKMVSDGLQPDCITYTCLIHAHCERGRLREAR 567

Query: 284 GLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGY 343
            + + M+  GL P   TY   +  YC  G + +A   F  M  +G +   V+YN+LI+  
Sbjct: 568 DIFDGMLVSGLPPSAVTYTVFIHAYCRRGNLYSAYGWFQKMLEEGVRPNEVTYNVLIHAL 627

Query: 344 CKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDL 403
           C++     A   + +++  G+     TY  L+ G  + G    A +L+ EM  + + PD 
Sbjct: 628 CRMGRTNLAYQHFHEMLERGLSPNKYTYTLLIDGNCKEGNWEEAIRLYSEMHQHGIHPDH 687

Query: 404 STYNILIDGL 413
            T+N L  G 
Sbjct: 688 CTHNALFKGF 697



 Score = 82.4 bits (202), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 58/239 (24%), Positives = 106/239 (44%), Gaps = 42/239 (17%)

Query: 353 MSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDG 412
           ++ +R++  +GV   +   N +L  L    +    + ++ EM    +EP + TYN L+D 
Sbjct: 181 LAAFREMAHHGVPPFIKECNLVLRALRDEARWDDMRSVYAEMLQLGIEPSIVTYNTLLDS 240

Query: 413 LCKNNCVQEAVKLFHMLEMNKFEFGI----EIFNCLIDGLCKAGRLDNAWELFHK----- 463
             +   V +A KL    EM     G       +N +I+GL + G L+ A +L  +     
Sbjct: 241 FFREGRVDQAAKLLR--EMEARPGGCLPSDVTYNVVINGLARKGELEKAAQLVDRMRMSK 298

Query: 464 -----------------------------LPQKGLVPTVVTYSIMIHGLCRKGKLEKAND 494
                                        +  +G+VPTVVTY+ +IHG+ R G +E A  
Sbjct: 299 KASAFTFNPLITGYFARGSVEKAGALQLEMENEGIVPTVVTYNTIIHGMFRSGNVEAARM 358

Query: 495 FLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
             + M   G  P+++T+N+L++G+ +     + + L   +      L P   T++I++D
Sbjct: 359 KFVEMRAMGLLPDLITYNSLINGYCKAGNLKEALWLFGDLKRA--GLAPSVLTYNILLD 415


>gi|414591656|tpg|DAA42227.1| TPA: PPR-814a [Zea mays]
          Length = 816

 Score =  276 bits (706), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 163/499 (32%), Positives = 265/499 (53%), Gaps = 15/499 (3%)

Query: 58  EARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILI 117
           EA   F  M      P + + N L G++ K          +  +   G  PD  +  I++
Sbjct: 309 EAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIML 368

Query: 118 NCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKK 177
           N +  K  G  V+      T LF  M+  G+ PD+ T+  LI  +   G L  A+ +  +
Sbjct: 369 NGYATK--GCLVD-----MTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNE 421

Query: 178 MVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHG 237
           M     ++G+  K ++ +Y  +I +LC+ G +D A E F +M  +G+ P       LI G
Sbjct: 422 M----RDHGV--KPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQG 475

Query: 238 FCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPD 297
           FC  G+  +   L  E+++ G R +++ F  +I+ LCK G++ +A  + +L +  GL+PD
Sbjct: 476 FCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPD 535

Query: 298 RFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYR 357
              YN LMDGYCLVG+++ A  +F +M S G +  VV Y  L+NGYCKI  ++E +SL+R
Sbjct: 536 AVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFR 595

Query: 358 QIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNN 417
           +++  G++ + I YN ++ GLF+AG+   A+  F EM    +  +  TY+I++ GL KN 
Sbjct: 596 EMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNR 655

Query: 418 CVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYS 477
           C  EA+ LF  L     +  I   N +I G+ +  R++ A +LF  + + GLVP  VTYS
Sbjct: 656 CFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYS 715

Query: 478 IMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEP 537
           IMI  L ++G +E+A D    M+  GC P+    N ++   L+ N+  +    L K+   
Sbjct: 716 IMITNLLKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKI--D 773

Query: 538 ERNLVPDDTTFSIVVDLLA 556
           ERN   +  T  ++VDL +
Sbjct: 774 ERNFSLEHLTAMLLVDLFS 792



 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 154/533 (28%), Positives = 270/533 (50%), Gaps = 31/533 (5%)

Query: 59  ARYFFGYM--THMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNIL 116
           A  FFG +  T ++    I+S +LL G     R  +A+     +   +G +PD  + NIL
Sbjct: 132 ALAFFGQLLRTGLRVDAIIAS-HLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYNIL 190

Query: 117 INCFGNKERGLCVENRIKEATWLFKNMIAFGV--RPDVITYGTLINGFCRTGNLSVALRL 174
           +       + LC + +  +A  L + M   G    PDV+ Y T+I+GF + G+++ A  L
Sbjct: 191 L-------KSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDL 243

Query: 175 HKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTL 234
            K+MV    + G+    ++ +YS ++ +LCK   +DKA+    +M  +G+ P       L
Sbjct: 244 FKEMV----QRGI--PPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNL 297

Query: 235 IHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGL 294
           I+G+   G W+E   +F EM      P+++  N ++  LCK GKI EA  + + M  +G 
Sbjct: 298 IYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQ 357

Query: 295 NPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMS 354
           NPD F+Y  +++GY   G +    ++F  M   G    + ++N+LI  Y     +++AM 
Sbjct: 358 NPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMI 417

Query: 355 LYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLC 414
           ++ ++  +GV+  V+TY T+++ L + G+   A + F++M    V PD   Y+ LI G C
Sbjct: 418 IFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFC 477

Query: 415 KNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVV 474
            +  + +A +L   +  N     I  F  +I+ LCK GR+ +A  +F      GL P  V
Sbjct: 478 THGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAV 537

Query: 475 TYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKM 534
            Y++++ G C  GK+EKA      M   G  PNVV + TL++G+ +  +  + + L  +M
Sbjct: 538 VYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREM 597

Query: 535 AEPERNLVPDDTTFSIVVDLL-------AKDEKYHECS----AVSKSSYRACL 576
              ++ + P    ++I++D L           K+HE +    A++K +Y   L
Sbjct: 598 L--QKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVL 648



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 133/501 (26%), Positives = 227/501 (45%), Gaps = 37/501 (7%)

Query: 24  LFKSPRQIAAVSSPETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFG 83
           +FK  R+  ++      LN  +   CK G I   EAR  F  M     +P + S+ ++  
Sbjct: 313 VFKEMRR-QSILPDVVALNTLMGSLCKYGKIK--EARDVFDTMAMKGQNPDVFSYTIMLN 369

Query: 84  AVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGN--------------KERG--- 126
             A       +   +  ++  G+ PD  T N+LI  + N              ++ G   
Sbjct: 370 GYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKP 429

Query: 127 -----------LCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLH 175
                      LC   ++ +A   F  MI  GV PD   Y  LI GFC  G+L  A    
Sbjct: 430 HVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKA---- 485

Query: 176 KKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLI 235
           K+++S    NG+  + +I  +  II++LCK G V  A+ +F      G++P  VV   L+
Sbjct: 486 KELISEIMNNGM--RLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLM 543

Query: 236 HGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLN 295
            G+C  G  E+   +F  M+  G  PN++ +  +++  CK G+I+E   L   M+Q+G+ 
Sbjct: 544 DGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIK 603

Query: 296 PDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSL 355
           P    YN ++DG    GR   A+  F  M   G      +Y+I++ G  K    +EA+ L
Sbjct: 604 PSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFL 663

Query: 356 YRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCK 415
           ++++ +  V+  +IT NT+++G+FQ  +   A+ LF  +    + P   TY+I+I  L K
Sbjct: 664 FKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMITNLLK 723

Query: 416 NNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVT 475
              V+EA  +F  ++    E    + N ++  L K   +  A     K+ ++      +T
Sbjct: 724 EGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLT 783

Query: 476 YSIMIHGLCRKGKLEKANDFL 496
             +++     KG   +   FL
Sbjct: 784 AMLLVDLFSSKGTCREQIRFL 804



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 92/341 (26%), Positives = 147/341 (43%), Gaps = 43/341 (12%)

Query: 258 GPR---PNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRI 314
           GPR   P   T+ +++DC  +  +   A      +++ GL  D    + L+ G+C   R 
Sbjct: 105 GPRVLSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRT 164

Query: 315 DTAREIFLSMHSK-GCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGV--RQTVITY 371
           D A +I L    + GC   V SYNIL+   C      +A  L R +   G      V+ Y
Sbjct: 165 DEALDILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAY 224

Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCK---------------- 415
           NT++ G F+ G    A  LF EM    + PDL TY+ ++  LCK                
Sbjct: 225 NTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVN 284

Query: 416 ----------NNCV---------QEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDN 456
                     NN +         +EAV++F  +        +   N L+  LCK G++  
Sbjct: 285 KGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKE 344

Query: 457 AWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMH 516
           A ++F  +  KG  P V +Y+IM++G   KG L    D    M  +G AP++ TFN L+ 
Sbjct: 345 ARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIK 404

Query: 517 GFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAK 557
            +       K + + ++M   +  + P   T+  V+  L +
Sbjct: 405 AYANCGMLDKAMIIFNEMR--DHGVKPHVVTYMTVIAALCR 443


>gi|224713520|gb|ACN62067.1| PPR-816 [Zea mays]
          Length = 816

 Score =  276 bits (705), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 177/560 (31%), Positives = 280/560 (50%), Gaps = 61/560 (10%)

Query: 55  NLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLN 114
           ++N+A   F  M      P + +++ +  A+ K R  D   +F R++V+ G+LPD  T N
Sbjct: 236 DVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYN 295

Query: 115 ILI-------------NCFGNKER---------------GLCVENRIKEATWLFKNMIAF 146
            LI               F    R                LC   +IKEA  +F  M   
Sbjct: 296 NLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMK 355

Query: 147 GVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGD---------------YEN-GLISK 190
           G  PDV +Y  ++NG+   G L     L   M+ GD               Y N G++ K
Sbjct: 356 GQNPDVFSYTIMLNGYATKGCLVDMTDLFDLML-GDGIAPVICTFNVLIKAYANCGMLDK 414

Query: 191 T--------------NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIH 236
                          ++ +Y  +I +LC+ G +D A E F +M  +G+ P       LI 
Sbjct: 415 AMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQ 474

Query: 237 GFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNP 296
           GFC  G+  +   L  E+++ G R +++ F  +I+ LCK G++ +A  + +L +  GL+P
Sbjct: 475 GFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHP 534

Query: 297 DRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLY 356
           D   YN LMDGYCLVG+++ A  +F +M S G +  VV Y  L+NGYCKI  ++E +SL+
Sbjct: 535 DAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLF 594

Query: 357 RQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKN 416
           R+++  G++ + I YN ++ GLF+AG+   A+  F EM    +  +  TY+I++ GL KN
Sbjct: 595 REMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKN 654

Query: 417 NCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTY 476
            C  EA+ LF  L     +  I   N +I G+ +  R++ A +LF  + + GLVP  VTY
Sbjct: 655 RCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCAVTY 714

Query: 477 SIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAE 536
           SIMI  L ++G +E+A D    M+  GC P+    N ++   L+ N+  +    L K+  
Sbjct: 715 SIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKI-- 772

Query: 537 PERNLVPDDTTFSIVVDLLA 556
            ERN   +  T  ++VDL +
Sbjct: 773 DERNFSLEHLTAMLLVDLFS 792



 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 154/533 (28%), Positives = 270/533 (50%), Gaps = 31/533 (5%)

Query: 59  ARYFFGYM--THMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNIL 116
           A  FFG +  T ++    I+S +LL G     R  +A+     +   +G +PD  + NIL
Sbjct: 132 ALAFFGQLLRTGLRVDAIIAS-HLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYNIL 190

Query: 117 INCFGNKERGLCVENRIKEATWLFKNMIAFGV--RPDVITYGTLINGFCRTGNLSVALRL 174
           +       + LC + +  +A  L + M   G    PDV+ Y T+I+GF + G+++ A  L
Sbjct: 191 L-------KSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDL 243

Query: 175 HKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTL 234
            K+MV    + G+    ++ +YS ++ +LCK   +DKA+    +M  +G+ P       L
Sbjct: 244 FKEMV----QRGI--PPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNL 297

Query: 235 IHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGL 294
           I+G+   G W+E   +F EM      P+++  N ++  LCK GKI EA  + + M  +G 
Sbjct: 298 IYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQ 357

Query: 295 NPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMS 354
           NPD F+Y  +++GY   G +    ++F  M   G    + ++N+LI  Y     +++AM 
Sbjct: 358 NPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMI 417

Query: 355 LYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLC 414
           ++ ++  +GV+  V+TY T+++ L + G+   A + F++M    V PD   Y+ LI G C
Sbjct: 418 IFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFC 477

Query: 415 KNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVV 474
            +  + +A +L   +  N     I  F  +I+ LCK GR+ +A  +F      GL P  V
Sbjct: 478 THGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAV 537

Query: 475 TYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKM 534
            Y++++ G C  GK+EKA      M   G  PNVV + TL++G+ +  +  + + L  +M
Sbjct: 538 VYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREM 597

Query: 535 AEPERNLVPDDTTFSIVVDLL-------AKDEKYHECS----AVSKSSYRACL 576
              ++ + P    ++I++D L           K+HE +    A++K +Y   L
Sbjct: 598 L--QKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVL 648



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 131/501 (26%), Positives = 226/501 (45%), Gaps = 37/501 (7%)

Query: 24  LFKSPRQIAAVSSPETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFG 83
           +FK  R+  ++      LN  +   CK G   + EAR  F  M     +P + S+ ++  
Sbjct: 313 VFKEMRR-QSILPDVVALNTLMGSLCKYG--KIKEARDVFDTMAMKGQNPDVFSYTIMLN 369

Query: 84  AVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGN--------------KERG--- 126
             A       +   +  ++  G+ P   T N+LI  + N              ++ G   
Sbjct: 370 GYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKP 429

Query: 127 -----------LCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLH 175
                      LC   ++ +A   F  MI  GV PD   Y  LI GFC  G+L  A    
Sbjct: 430 HVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKA---- 485

Query: 176 KKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLI 235
           K+++S    NG+  + +I  +  II++LCK G V  A+ +F      G++P  VV   L+
Sbjct: 486 KELISEIMNNGM--RLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLM 543

Query: 236 HGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLN 295
            G+C  G  E+   +F  M+  G  PN++ +  +++  CK G+I+E   L   M+Q+G+ 
Sbjct: 544 DGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIK 603

Query: 296 PDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSL 355
           P    YN ++DG    GR   A+  F  M   G      +Y+I++ G  K    +EA+ L
Sbjct: 604 PSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFL 663

Query: 356 YRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCK 415
           ++++ +  V+  +IT NT+++G+FQ  +   A+ LF  +    + P   TY+I+I  L K
Sbjct: 664 FKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMITNLIK 723

Query: 416 NNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVT 475
              V+EA  +F  ++    E    + N ++  L K   +  A     K+ ++      +T
Sbjct: 724 EGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLT 783

Query: 476 YSIMIHGLCRKGKLEKANDFL 496
             +++     KG   +   FL
Sbjct: 784 AMLLVDLFSSKGTCREQIRFL 804



 Score =  129 bits (324), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 92/341 (26%), Positives = 146/341 (42%), Gaps = 43/341 (12%)

Query: 258 GPR---PNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRI 314
           GPR   P   T+ +++DC  +  +   A      +++ GL  D    + L+ G+C   R 
Sbjct: 105 GPRVLSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRT 164

Query: 315 DTAREIFLSMHSK-GCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGV--RQTVITY 371
           D A +I L    + GC   V SYNIL+   C      +A  L R +   G      V+ Y
Sbjct: 165 DEALDILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAY 224

Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCK---------------- 415
           NT++ G F+ G    A  LF EM    + PDL TY+ ++  LCK                
Sbjct: 225 NTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVN 284

Query: 416 ----------NNCV---------QEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDN 456
                     NN +         +EAV++F  +        +   N L+  LCK G++  
Sbjct: 285 KGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKE 344

Query: 457 AWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMH 516
           A ++F  +  KG  P V +Y+IM++G   KG L    D    M  +G AP + TFN L+ 
Sbjct: 345 ARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIK 404

Query: 517 GFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAK 557
            +       K + + ++M   +  + P   T+  V+  L +
Sbjct: 405 AYANCGMLDKAMIIFNEMR--DHGVKPHVVTYMTVIAALCR 443


>gi|302808965|ref|XP_002986176.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
 gi|300146035|gb|EFJ12707.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
          Length = 609

 Score =  274 bits (701), Expect = 9e-71,   Method: Compositional matrix adjust.
 Identities = 157/516 (30%), Positives = 267/516 (51%), Gaps = 23/516 (4%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
           P + S+N++           A +    ++ S G  PD  T   +I    N          
Sbjct: 110 PDVCSYNIVISGFCNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANA--------- 160

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
             +      ++ + G  P+V+TY  LI  F R   L  A++L ++M     E G     N
Sbjct: 161 -GDLDGAMDHLRSMGCDPNVVTYTALIAAFARAKKLEEAMKLLEEM----RERG--CPPN 213

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
           + +Y++++D+LCK  +V  A+++  +M   G  P V+   +L+ GFC  GN ++   L  
Sbjct: 214 LVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLG 273

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
            M+  G RPN++T++ +ID LCK  K  EA  +LE M  RG+ PD FTY++L+ G C   
Sbjct: 274 IMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKTRGVTPDAFTYSALIHGLCKAD 333

Query: 313 RIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYN 372
           +I+ A ++   M   GC   VV Y+ +I+ +CK   + EA    +++        V+TYN
Sbjct: 334 KIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYN 393

Query: 373 TLLSGLFQAGQAGYAQKLFDEMKLY-NVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
           T++ GL + G+   AQ + ++M+   +V PD+ TY+ +I+GLCK++ + EA KL   +  
Sbjct: 394 TVIDGLCKLGKIAEAQVILEQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCK 453

Query: 432 NKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEK 491
                 +  +  +IDGLCK GRL+ A  L   + + G  P VVTY+ +I GLC+  K+++
Sbjct: 454 AGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDE 513

Query: 492 ANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIV 551
           A   +  M   GC PN+VT+NT+++G   + +  +  +L+ +M +      PD  T+  +
Sbjct: 514 AERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRMKDGRAECSPDAATYRTI 573

Query: 552 V------DLLAKDEKYHECSAVSKSSYRACLYVTIF 581
           V      DL+ + E+  E    + SS +    +T+F
Sbjct: 574 VNALMSSDLVQEAEQLLEQMKSTTSSQQEQGSLTLF 609



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 125/411 (30%), Positives = 227/411 (55%), Gaps = 9/411 (2%)

Query: 168 LSVALRLHKKMVSGD-YENGLIS--KTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGI 224
           L V +R  K   +GD + + L++  + ++ SY+I+I   C  G +  A EL  EMK  G 
Sbjct: 84  LQVLVRCKKHREAGDLFRSELLASCEPDVCSYNIVISGFCNAGDLHAALELLEEMKSAGF 143

Query: 225 NPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANG 284
            P     T +I     AG+   ++G    +  +G  PN++T+  +I    +  K+ EA  
Sbjct: 144 APDAFTHTPIITAMANAGD---LDGAMDHLRSMGCDPNVVTYTALIAAFARAKKLEEAMK 200

Query: 285 LLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYC 344
           LLE M +RG  P+  TYN L+D  C +  +  A+++   M   G    V+++N L++G+C
Sbjct: 201 LLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFC 260

Query: 345 KILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLS 404
           K  NV++A  L   +++ G+R  V+TY+ L+ GL ++ +   A+++ +EMK   V PD  
Sbjct: 261 KRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKTRGVTPDAF 320

Query: 405 TYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKL 464
           TY+ LI GLCK + ++EA ++   +  +     + +++ +I   CK+G+L  A +   ++
Sbjct: 321 TYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEM 380

Query: 465 PQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNG-CAPNVVTFNTLMHGFLQNNK 523
            ++   P VVTY+ +I GLC+ GK+ +A   L  M+++G   P+VVT++T+++G  +++ 
Sbjct: 381 RKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESGDVLPDVVTYSTVINGLCKSDM 440

Query: 524 TSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKSSYRA 574
             +  +LL +M +   N  PD  T++ ++D L K  +  E   + +   RA
Sbjct: 441 LVEAQKLLDRMCKAGCN--PDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRA 489



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 124/413 (30%), Positives = 216/413 (52%), Gaps = 16/413 (3%)

Query: 55  NLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLN 114
            L EA      M      P + ++N+L  A+ K     A     +K++  G  P+ +T N
Sbjct: 194 KLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFN 253

Query: 115 ILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRL 174
            L++       G C    + +A  L   M+A G+RP+V+TY  LI+G C++     A  +
Sbjct: 254 SLVD-------GFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEV 306

Query: 175 HKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTL 234
            ++M +     G+    + F+YS +I  LCK   +++A+++   M G G  P VVV +++
Sbjct: 307 LEEMKT----RGVTP--DAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSI 360

Query: 235 IHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRG- 293
           IH FC +G   E      EM      P+++T+N +ID LCK GKI EA  +LE M + G 
Sbjct: 361 IHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESGD 420

Query: 294 LNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAM 353
           + PD  TY+++++G C    +  A+++   M   GC   VV+Y  +I+G CK   +EEA 
Sbjct: 421 VLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAE 480

Query: 354 SLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGL 413
            L + +   G    V+TY TL+SGL +A +   A+++ +EM+     P+L TYN +++GL
Sbjct: 481 YLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGL 540

Query: 414 CKNNCVQEAVKLFHMLEMNKFEFGIE--IFNCLIDGLCKAGRLDNAWELFHKL 464
           C +  ++EA +L   ++  + E   +   +  +++ L  +  +  A +L  ++
Sbjct: 541 CVSGRIKEAQQLVQRMKDGRAECSPDAATYRTIVNALMSSDLVQEAEQLLEQM 593



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 94/335 (28%), Positives = 158/335 (47%), Gaps = 34/335 (10%)

Query: 265 TFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSM 324
           ++N ++  L +  K  EA  L    +     PD  +YN ++ G+C  G +  A E+   M
Sbjct: 79  SWNSLLQVLVRCKKHREAGDLFRSELLASCEPDVCSYNIVISGFCNAGDLHAALELLEEM 138

Query: 325 HSK--------------------------------GCKHTVVSYNILINGYCKILNVEEA 352
            S                                 GC   VV+Y  LI  + +   +EEA
Sbjct: 139 KSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSMGCDPNVVTYTALIAAFARAKKLEEA 198

Query: 353 MSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDG 412
           M L  ++   G    ++TYN L+  L +    G AQ +  +M      P++ T+N L+DG
Sbjct: 199 MKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDG 258

Query: 413 LCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPT 472
            CK   V +A KL  ++        +  ++ LIDGLCK+ +   A E+  ++  +G+ P 
Sbjct: 259 FCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKTRGVTPD 318

Query: 473 VVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLH 532
             TYS +IHGLC+  K+E+A   L  M  +GC P+VV +++++H F ++ K  +  + L 
Sbjct: 319 AFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQ 378

Query: 533 KMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAV 567
           +M +  ++  PD  T++ V+D L K  K  E   +
Sbjct: 379 EMRKQRKS--PDVVTYNTVIDGLCKLGKIAEAQVI 411



 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 66/252 (26%), Positives = 114/252 (45%), Gaps = 40/252 (15%)

Query: 352 AMSLYRQIISN--GVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNIL 409
           A++ +R   ++  G   T  ++N+LL  L +  +   A  LF    L + EPD+ +YNI+
Sbjct: 59  ALAFFRWAPASIPGFSHTAFSWNSLLQVLVRCKKHREAGDLFRSELLASCEPDVCSYNIV 118

Query: 410 IDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIF---------------------------- 441
           I G C    +  A++L    EM    F  + F                            
Sbjct: 119 ISGFCNAGDLHAALELLE--EMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSMGCD 176

Query: 442 ------NCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDF 495
                   LI    +A +L+ A +L  ++ ++G  P +VTY++++  LC+   +  A D 
Sbjct: 177 PNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDV 236

Query: 496 LLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLL 555
           +  M + G APNV+TFN+L+ GF +        +LL  M    + + P+  T+S ++D L
Sbjct: 237 VKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMV--AKGMRPNVVTYSALIDGL 294

Query: 556 AKDEKYHECSAV 567
            K +K+ E   V
Sbjct: 295 CKSQKFLEAKEV 306



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 39/134 (29%), Positives = 59/134 (44%), Gaps = 11/134 (8%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CK G   L EA Y    M     +P + ++  L   + K R  D       ++ + G  P
Sbjct: 471 CKCG--RLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPP 528

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVR--PDVITYGTLINGFCRTG 166
           + +T N ++N       GLCV  RIKEA  L + M        PD  TY T++N    + 
Sbjct: 529 NLVTYNTMVN-------GLCVSGRIKEAQQLVQRMKDGRAECSPDAATYRTIVNALMSSD 581

Query: 167 NLSVALRLHKKMVS 180
            +  A +L ++M S
Sbjct: 582 LVQEAEQLLEQMKS 595


>gi|302783901|ref|XP_002973723.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
 gi|300158761|gb|EFJ25383.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
          Length = 581

 Score =  274 bits (700), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 144/423 (34%), Positives = 244/423 (57%), Gaps = 10/423 (2%)

Query: 143 MIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDS 202
           M   G  PDV+TY T+I+G C+TG ++ AL + ++M     E G+    ++ +Y+II+D 
Sbjct: 1   MAEKGFEPDVVTYSTIISGLCKTGKVTEALEMVEEMT----EKGV--NPDVATYTIIVDR 54

Query: 203 LCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPN 262
           LC+ G VD+A ELF +M  RG +   V    LI+G C   N E    L  EM   G  P+
Sbjct: 55  LCRAGKVDEADELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPD 114

Query: 263 LLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIF- 321
            +T+N ++  LC+ GK++EA    + M  RG +PD   YN L+D     G++  A  +F 
Sbjct: 115 NITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFK 174

Query: 322 -LSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQ 380
            + M  +     +++YN LI+G+C++   +EAM L++ +I+ G     +TYN++L GL +
Sbjct: 175 TMDMADRKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLAR 234

Query: 381 AGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEI 440
                 A+++F +M      P+ +TY+I++ G C+   +   ++L+  +   +F   + +
Sbjct: 235 KSNMDEAEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLL 294

Query: 441 FNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYME 500
            N +ID LCKA ++D+A ++  ++ + G VP VVTY+I++ GLC+   ++KA++    M 
Sbjct: 295 CNAVIDMLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMV 354

Query: 501 KNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEK 560
            NGCAP++V+++ +++G  + NK      L  +M   ER LVPD  TF+I++D L K  K
Sbjct: 355 DNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMI--ERKLVPDVVTFNILMDGLCKAGK 412

Query: 561 YHE 563
             E
Sbjct: 413 LDE 415



 Score =  273 bits (697), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 157/491 (31%), Positives = 257/491 (52%), Gaps = 17/491 (3%)

Query: 72  SPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVEN 131
            P + +++ +   + K       +    ++   G+ PD  T  I+++        LC   
Sbjct: 7   EPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVD-------RLCRAG 59

Query: 132 RIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKT 191
           ++ EA  LF  MI  G   + + Y  LING C+  N+  A +L ++M S  YE   I+  
Sbjct: 60  KVDEADELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNIT-- 117

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
               Y+ I+  LC+ G V +AK+ F  M  RG +P VV    L+      G   E  GLF
Sbjct: 118 ----YNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLF 173

Query: 252 --IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYC 309
             ++M D    P+L+T+N +ID  C+  K +EA  L + +I +G  PD  TYNS++ G  
Sbjct: 174 KTMDMADRKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLA 233

Query: 310 LVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVI 369
               +D A E+F  M   GC     +Y+I+++G+C++ N+   + LY ++        V+
Sbjct: 234 RKSNMDEAEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVL 293

Query: 370 TYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHML 429
             N ++  L +A +   A K+ +EM      PD+ TYNIL+DGLCK N V +A +LF  +
Sbjct: 294 LCNAVIDMLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTM 353

Query: 430 EMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKL 489
             N     I  ++ +++GLCK  ++ +A  LF ++ ++ LVP VVT++I++ GLC+ GKL
Sbjct: 354 VDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKL 413

Query: 490 EKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFS 549
           ++A D L  M ++   P+ VT  TLMHG  ++ +T + V L   M   E+  V D    +
Sbjct: 414 DEAKDLLDVMSEHNVLPDGVTCTTLMHGLCRDKRTDEAVRLFQYMV--EKGTVADVLPHN 471

Query: 550 IVVDLLAKDEK 560
           IV+  L ++ K
Sbjct: 472 IVLAGLCREGK 482



 Score =  255 bits (651), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 156/506 (30%), Positives = 254/506 (50%), Gaps = 19/506 (3%)

Query: 35  SSPETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAV 94
           S+     N  ++  CK    N+  A      M      P   ++N +   + +       
Sbjct: 77  SANTVAYNALINGLCKDE--NIERAYKLLEEMASKGYEPDNITYNTILSGLCRMGKVSEA 134

Query: 95  ISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFK--NMIAFGVRPDV 152
             F+  + S G  PD +  N L++        L  E ++ EA  LFK  +M    V PD+
Sbjct: 135 KQFFDSMPSRGYSPDVVAYNGLLD-------ALYKEGKVAEAWGLFKTMDMADRKVAPDL 187

Query: 153 ITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKA 212
           ITY TLI+GFCR      A++L K +++  Y        +  +Y+ I+  L ++  +D+A
Sbjct: 188 ITYNTLIDGFCRVEKTDEAMKLFKDVIAKGY------MPDTVTYNSILLGLARKSNMDEA 241

Query: 213 KELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDC 272
           +E+F +M   G  P     + ++ G C  GN      L+ EM +    P++L  N +ID 
Sbjct: 242 EEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVIDM 301

Query: 273 LCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHT 332
           LCK  K+++A+ +LE M + G  PD  TYN L+DG C    +D A E+F +M   GC   
Sbjct: 302 LCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPD 361

Query: 333 VVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFD 392
           +VSY++++NG CK   V +A  L+ ++I   +   V+T+N L+ GL +AG+   A+ L D
Sbjct: 362 IVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLD 421

Query: 393 EMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAG 452
            M  +NV PD  T   L+ GLC++    EAV+LF  +        +   N ++ GLC+ G
Sbjct: 422 VMSEHNVLPDGVTCTTLMHGLCRDKRTDEAVRLFQYMVEKGTVADVLPHNIVLAGLCREG 481

Query: 453 RLDNAWELFHKLPQKG--LVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVT 510
           +L  A   F  + +      P VVTY+ +++ L   G++++A D+   M  +GCAP+ V 
Sbjct: 482 KLAQALLFFKSMVKSDGEFSPDVVTYTTLVNALIEAGRVDQAVDYFQQMTGSGCAPDYVA 541

Query: 511 FNTLMHGFLQNNKTSKVVELLHKMAE 536
           +NTLM+G  +  +  +   L   M E
Sbjct: 542 YNTLMNGLRKQGRHIQADRLTQAMKE 567



 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 114/316 (36%), Positives = 178/316 (56%), Gaps = 4/316 (1%)

Query: 254 MLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGR 313
           M + G  P+++T++ +I  LCK GK+ EA  ++E M ++G+NPD  TY  ++D  C  G+
Sbjct: 1   MAEKGFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGK 60

Query: 314 IDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNT 373
           +D A E+F  M  +GC    V+YN LING CK  N+E A  L  ++ S G     ITYNT
Sbjct: 61  VDEADELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNT 120

Query: 374 LLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNK 433
           +LSGL + G+   A++ FD M      PD+  YN L+D L K   V EA  LF  ++M  
Sbjct: 121 ILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMAD 180

Query: 434 FEFGIEI--FNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEK 491
            +   ++  +N LIDG C+  + D A +LF  +  KG +P  VTY+ ++ GL RK  +++
Sbjct: 181 RKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDE 240

Query: 492 ANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIV 551
           A +    M  +GCAPN  T++ ++ G  +    ++ +EL  +M   E+   PD    + V
Sbjct: 241 AEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMT--EKRFSPDVLLCNAV 298

Query: 552 VDLLAKDEKYHECSAV 567
           +D+L K +K  +   V
Sbjct: 299 IDMLCKAKKVDDAHKV 314



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 115/407 (28%), Positives = 207/407 (50%), Gaps = 15/407 (3%)

Query: 66  MTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKER 125
           M   + +P + ++N L     +    D  +  ++ +++ G +PD +T N ++        
Sbjct: 178 MADRKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSIL-------L 230

Query: 126 GLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYEN 185
           GL  ++ + EA  +FK M+  G  P+  TY  +++G CR GN++  L L+++M    +  
Sbjct: 231 GLARKSNMDEAEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFS- 289

Query: 186 GLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWE 245
                 ++   + +ID LCK   VD A ++  EM   G  P VV    L+ G C     +
Sbjct: 290 -----PDVLLCNAVIDMLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVD 344

Query: 246 EVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLM 305
           + + LF  M+D G  P++++++V+++ LCK  K+++A  L + MI+R L PD  T+N LM
Sbjct: 345 KAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILM 404

Query: 306 DGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVR 365
           DG C  G++D A+++   M         V+   L++G C+    +EA+ L++ ++  G  
Sbjct: 405 DGLCKAGKLDEAKDLLDVMSEHNVLPDGVTCTTLMHGLCRDKRTDEAVRLFQYMVEKGTV 464

Query: 366 QTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVE--PDLSTYNILIDGLCKNNCVQEAV 423
             V+ +N +L+GL + G+   A   F  M   + E  PD+ TY  L++ L +   V +AV
Sbjct: 465 ADVLPHNIVLAGLCREGKLAQALLFFKSMVKSDGEFSPDVVTYTTLVNALIEAGRVDQAV 524

Query: 424 KLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLV 470
             F  +  +        +N L++GL K GR   A  L   + +KG +
Sbjct: 525 DYFQQMTGSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAMKEKGFL 571



 Score =  128 bits (322), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 85/321 (26%), Positives = 145/321 (45%), Gaps = 52/321 (16%)

Query: 45  LHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSI 104
           L  +C+ G  N+      +  MT  + SP +   N +   + K +  D       ++  I
Sbjct: 264 LSGHCRVG--NMARCLELYEEMTEKRFSPDVLLCNAVIDMLCKAKKVDDAHKVLEEMSKI 321

Query: 105 GLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCR 164
           G +PD +T NIL++       GLC  N + +A  LF  M+  G  PD+++Y  ++NG C+
Sbjct: 322 GAVPDVVTYNILLD-------GLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCK 374

Query: 165 TGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGI 224
           T  +  A  L  +M+    E  L+   ++ +++I++D LCK G +D+AK+L   M    +
Sbjct: 375 TNKVHDARVLFDRMI----ERKLVP--DVVTFNILMDGLCKAGKLDEAKDLLDVMSEHNV 428

Query: 225 NPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGP------------------------- 259
            P  V CTTL+HG C     +E   LF  M++ G                          
Sbjct: 429 LPDGVTCTTLMHGLCRDKRTDEAVRLFQYMVEKGTVADVLPHNIVLAGLCREGKLAQALL 488

Query: 260 ------------RPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDG 307
                        P+++T+  +++ L + G++++A    + M   G  PD   YN+LM+G
Sbjct: 489 FFKSMVKSDGEFSPDVVTYTTLVNALIEAGRVDQAVDYFQQMTGSGCAPDYVAYNTLMNG 548

Query: 308 YCLVGRIDTAREIFLSMHSKG 328
               GR   A  +  +M  KG
Sbjct: 549 LRKQGRHIQADRLTQAMKEKG 569


>gi|302142431|emb|CBI19634.3| unnamed protein product [Vitis vinifera]
          Length = 839

 Score =  274 bits (700), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 161/547 (29%), Positives = 270/547 (49%), Gaps = 45/547 (8%)

Query: 59  ARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILIN 118
           A Y F  M      P + S N L   + KN         Y++++ +G++PD   ++I++N
Sbjct: 141 ALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVN 200

Query: 119 CFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKM 178
            F       C + ++ EA    K M   GV P+++TY +LING+   G++  A  + K M
Sbjct: 201 AF-------CKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFM 253

Query: 179 VSGDYENGLISKTNIF------------------------------SYSIIIDSLCKEGL 208
                   +++ T +                               +Y ++ID  C+ G 
Sbjct: 254 SEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGK 313

Query: 209 VDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNV 268
           +D A  L  EM   G+   + +C +LI+G+C  G   E  G+   M+D   +P+  ++N 
Sbjct: 314 IDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNT 373

Query: 269 MIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKG 328
           ++D  C+ G  +EA  L + M+Q G+ P   TYN+L+ G C VG  D A +I+  M  +G
Sbjct: 374 LLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRG 433

Query: 329 CKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQ 388
                V Y+ L++G  K+ N E A +L++ I++ G  ++ IT+NT++SGL + G+   A+
Sbjct: 434 VAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAE 493

Query: 389 KLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGL 448
           ++FD+MK     PD  TY  LIDG CK + V +A K+   +E       IE++N LI GL
Sbjct: 494 EIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGL 553

Query: 449 CKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNV 508
            K+ RL    +L  ++  +GL P +VTY  +I G C++G L+KA      M +NG + N+
Sbjct: 554 FKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANI 613

Query: 509 VTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVS 568
           +  +T++ G  +  +  +   L+ KM   +    PD   F      L  D +Y     ++
Sbjct: 614 IICSTMVSGLYRLGRIDEANLLMQKMV--DHGFFPDHECF------LKSDIRYAAIQKIA 665

Query: 569 KSSYRAC 575
            S   +C
Sbjct: 666 DSLDESC 672



 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 146/531 (27%), Positives = 240/531 (45%), Gaps = 80/531 (15%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
           P   ++ +L     +    D  +    +++ +GL  +    N LIN       G C    
Sbjct: 296 PDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLIN-------GYCKRGE 348

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
           I EA  +   M+ + ++PD  +Y TL++G+CR G+ S A  L  KM+    E        
Sbjct: 349 IHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIE------PT 402

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
           + +Y+ ++  LC+ G  D A +++  M  RG+ P  V  +TL+ G     N+E  + L+ 
Sbjct: 403 VLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWK 462

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
           ++L  G   + +TFN MI  LCK GK+ EA  + + M   G +PD  TY +L+DGYC   
Sbjct: 463 DILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKAS 522

Query: 313 RIDTA-----------------------------------REIFLSMHSKGCKHTVVSYN 337
            +  A                                    ++   M  +G    +V+Y 
Sbjct: 523 NVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYG 582

Query: 338 ILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLY 397
            LI+G+CK   +++A S Y ++  NG+   +I  +T++SGL++ G+   A  L  +M  +
Sbjct: 583 ALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDH 642

Query: 398 NVEPDLS--------------------------------TYNILIDGLCKNNCVQEAVKL 425
              PD                                   YNI I GLCK   V +A + 
Sbjct: 643 GFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRF 702

Query: 426 FHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCR 485
           F ML +  F      +  LI G   AG +D A+ L  ++ ++GLVP +VTY+ +I+GLC+
Sbjct: 703 FSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCK 762

Query: 486 KGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAE 536
              +++A      + + G  PNVVT+NTL+ G+ +        +L  KM E
Sbjct: 763 SENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIE 813



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 147/553 (26%), Positives = 263/553 (47%), Gaps = 71/553 (12%)

Query: 62  FFGYMTHMQP-SPPISSFNLLFGAVAKNRHYDAVISFYRKLVS---------------IG 105
           FF +++  Q   P + S+  L   +++ R YD   ++  +LV                +G
Sbjct: 54  FFQFVSKQQNFRPNVKSYCKLVHILSRGRMYDETRAYLNQLVDLCKFKDRGNVIWDELVG 113

Query: 106 LLPDF----LTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLING 161
           +  +F       ++++  +   E+GL      K A ++F NM   G  P + +  +L+N 
Sbjct: 114 VYREFAFSPTVFDMILKVY--VEKGL-----TKNALYVFDNMGKCGRIPSLRSCNSLLNN 166

Query: 162 FCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKG 221
             + G    A  ++++M+      G++   ++F  SI++++ CK+G VD+A     +M+ 
Sbjct: 167 LVKNGETHTAHYVYQQMI----RVGIVP--DVFMVSIMVNAFCKDGKVDEAAGFVKKMEN 220

Query: 222 RGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINE 281
            G+ P +V   +LI+G+   G+ E   G+   M + G   N++T+ ++I   CK  K++E
Sbjct: 221 LGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDE 280

Query: 282 ANGLLELMIQR-GLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILI 340
           A  +L  M +   L PD   Y  L+DGYC  G+ID A  +   M   G K  +   N LI
Sbjct: 281 AEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLI 340

Query: 341 NGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVE 400
           NGYCK   + EA  +  +++   ++    +YNTLL G  + G    A  L D+M    +E
Sbjct: 341 NGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIE 400

Query: 401 PDLSTYNILIDGLCKNNCVQEAVKLFHML--------------------EMNKFEFGIEI 440
           P + TYN L+ GLC+     +A++++H++                    +M  FE    +
Sbjct: 401 PTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTL 460

Query: 441 ---------------FNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCR 485
                          FN +I GLCK G++  A E+F K+   G  P  +TY  +I G C+
Sbjct: 461 WKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCK 520

Query: 486 KGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDD 545
              + +A      ME+   +P++  +N+L+ G  ++ +  +V +LL +M    R L P+ 
Sbjct: 521 ASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMG--IRGLTPNI 578

Query: 546 TTFSIVVDLLAKD 558
            T+  ++D   K+
Sbjct: 579 VTYGALIDGWCKE 591



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 127/436 (29%), Positives = 209/436 (47%), Gaps = 26/436 (5%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
           N  L   C+ G    ++A   +  M     +P    ++ L   + K  +++   + ++ +
Sbjct: 407 NTLLKGLCRVGA--FDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDI 464

Query: 102 VSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLING 161
           ++ G     +T N +I+       GLC   ++ EA  +F  M   G  PD ITY TLI+G
Sbjct: 465 LARGFTKSRITFNTMIS-------GLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDG 517

Query: 162 FCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKG 221
           +C+  N+  A +     V G  E   IS + I  Y+ +I  L K   + +  +L  EM  
Sbjct: 518 YCKASNVGQAFK-----VKGAMEREPISPS-IEMYNSLISGLFKSRRLVEVTDLLTEMGI 571

Query: 222 RGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINE 281
           RG+ P +V    LI G+C  G  ++    + EM + G   N++  + M+  L + G+I+E
Sbjct: 572 RGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDE 631

Query: 282 ANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTV----VSYN 337
           AN L++ M+  G  PD   +      Y  + +I  + +       + CK  +    + YN
Sbjct: 632 ANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLD-------ESCKTFLLPNNIVYN 684

Query: 338 ILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLY 397
           I I G CK   V++A   +  +   G      TY TL+ G   AG    A +L DEM   
Sbjct: 685 IAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRR 744

Query: 398 NVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNA 457
            + P++ TYN LI+GLCK+  V  A +LFH L        +  +N LIDG CK G +D A
Sbjct: 745 GLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAA 804

Query: 458 WELFHKLPQKGLVPTV 473
           ++L  K+ ++G+ P++
Sbjct: 805 FKLKDKMIEEGISPSI 820



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 117/466 (25%), Positives = 220/466 (47%), Gaps = 41/466 (8%)

Query: 196 YSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEML 255
           + +I+    ++GL   A  +F  M   G  P++  C +L++     G     + ++ +M+
Sbjct: 125 FDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMI 184

Query: 256 DLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRID 315
            +G  P++   ++M++  CK GK++EA G ++ M   G+ P+  TY+SL++GY  +G ++
Sbjct: 185 RVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVE 244

Query: 316 TAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYR------------------ 357
            A+ +   M  KG    VV+Y +LI GYCK   ++EA  + R                  
Sbjct: 245 AAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVL 304

Query: 358 ------------------QIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNV 399
                             +++  G++  +   N+L++G  + G+   A+ +   M  +N+
Sbjct: 305 IDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNL 364

Query: 400 EPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWE 459
           +PD  +YN L+DG C+     EA  L   +     E  +  +N L+ GLC+ G  D+A +
Sbjct: 365 KPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQ 424

Query: 460 LFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFL 519
           ++H + ++G+ P  V YS ++ GL +    E A+     +   G   + +TFNT++ G  
Sbjct: 425 IWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLC 484

Query: 520 QNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKSSYRACLYVT 579
           +  K  +  E+  KM   +    PD  T+  ++D   K     +   V  +  R  +  +
Sbjct: 485 KMGKMVEAEEIFDKM--KDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPS 542

Query: 580 IFQPSSLGSMIGCTVRLMPQPEMSDTLGDDGDGNAGPIILSAVLLI 625
           I   +SL S +  + RL+   E++D L + G     P I++   LI
Sbjct: 543 IEMYNSLISGLFKSRRLV---EVTDLLTEMGIRGLTPNIVTYGALI 585


>gi|308080398|ref|NP_001183938.1| PPR-814a [Zea mays]
 gi|223929924|gb|ACN24620.1| PPR-814a [Zea mays]
          Length = 814

 Score =  273 bits (699), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 162/499 (32%), Positives = 267/499 (53%), Gaps = 15/499 (3%)

Query: 58  EARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILI 117
           EA   F  M      P + +FN+L G++ K          +  +   G  PD  + NI++
Sbjct: 307 EAVRVFKEMRRQSILPDVVTFNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIML 366

Query: 118 NCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKK 177
           N +  K  G  V+      T LF  M+  G+ P + T+  LI  +   G L  A+ +  +
Sbjct: 367 NGYATK--GCLVD-----MTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNE 419

Query: 178 MVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHG 237
           M     ++G+  K N+ +Y+ +I +LC+ G +D A E F +M  +G+ P       LI G
Sbjct: 420 M----RDHGV--KPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQG 473

Query: 238 FCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPD 297
           FC  G+  +   L  E+++ G   +++ F+ +I+ LCK G++ +A  + +L +  GL+P 
Sbjct: 474 FCTHGSLLKAKELISEIMNNGMHLDIVLFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPT 533

Query: 298 RFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYR 357
              Y+ LMDGYCLVG+++ A  +F +M S G +   V Y  L+NGYCKI  ++E +SL+R
Sbjct: 534 AVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFR 593

Query: 358 QIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNN 417
           +++  G++ + I YN ++ GLF+AG+   A+  F EM    +  +  TY+I++ GL KN 
Sbjct: 594 EMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNR 653

Query: 418 CVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYS 477
           C  EA+ LF  L     +  I   N +I G+ +  R++ A +LF  + + GLVP VVTYS
Sbjct: 654 CFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYS 713

Query: 478 IMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEP 537
           IMI  L ++G +E+A D    M+  GC P+    N ++   L+ N+  +    L K+   
Sbjct: 714 IMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKI--D 771

Query: 538 ERNLVPDDTTFSIVVDLLA 556
           ERN   +  T  ++VDL +
Sbjct: 772 ERNFSLEHLTTMLLVDLFS 790



 Score =  239 bits (609), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 164/571 (28%), Positives = 283/571 (49%), Gaps = 34/571 (5%)

Query: 20  KLSSLFKSPRQIAAVSSPETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFN 79
           + +S  + PR    V SP +     L + C         A  FFG +        I   N
Sbjct: 96  RAASRAQGPR----VLSPTSHTYAILMDCCTRAH-RPELALAFFGQLLRTGLRVDIIIAN 150

Query: 80  -LLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATW 138
            LL G     R  +A+     +   +G +PD  + +IL+       + LC + +  +A  
Sbjct: 151 HLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILL-------KSLCDQGKSGQADD 203

Query: 139 LFKNMIAFGV--RPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSY 196
           L + M   G    PDV+ Y T+I+GF + G+++ A  L K+MV    + G+    +  +Y
Sbjct: 204 LLRMMAEGGAVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMV----QRGI--PPDFVTY 257

Query: 197 SIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLD 256
           S ++ +LCK   +DKA+    +M  +G+ P       LI+G+   G W+E   +F EM  
Sbjct: 258 SSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRR 317

Query: 257 LGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDT 316
               P+++TFN+++  LCK GKI EA  + + M  +G NPD F+YN +++GY   G +  
Sbjct: 318 QSILPDVVTFNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVD 377

Query: 317 AREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLS 376
             ++F  M   G    + ++N+LI  Y     +++AM ++ ++  +GV+  V+TY T+++
Sbjct: 378 MTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIA 437

Query: 377 GLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEF 436
            L + G+   A + F++M    V PD   Y+ LI G C +  + +A +L   +  N    
Sbjct: 438 ALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHL 497

Query: 437 GIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFL 496
            I +F+ +I+ LCK GR+ +A  +F      GL PT V YS+++ G C  GK+EKA    
Sbjct: 498 DIVLFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVF 557

Query: 497 LYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLL- 555
             M   G  PN V + TL++G+ +  +  + + L  +M   ++ + P    ++I++D L 
Sbjct: 558 DAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREML--QKGIKPSTILYNIIIDGLF 615

Query: 556 ------AKDEKYHECS----AVSKSSYRACL 576
                     K+HE +    A++K +Y   L
Sbjct: 616 EAGRTVPAKVKFHEMTESGIAMNKCTYSIVL 646



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 133/501 (26%), Positives = 228/501 (45%), Gaps = 37/501 (7%)

Query: 24  LFKSPRQIAAVSSPETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFG 83
           +FK  R+ + +    T  N  +   CK G   + EAR  F  M     +P + S+N++  
Sbjct: 311 VFKEMRRQSILPDVVT-FNMLMGSLCKYG--KIKEARDVFDTMAMKGQNPDVFSYNIMLN 367

Query: 84  AVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGN--------------KERG--- 126
             A       +   +  ++  G+ P   T N+LI  + N              ++ G   
Sbjct: 368 GYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKP 427

Query: 127 -----------LCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLH 175
                      LC   ++ +A   F  MI  GV PD   Y  LI GFC  G+L  A    
Sbjct: 428 NVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKA---- 483

Query: 176 KKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLI 235
           K+++S    NG+    +I  +S II++LCK G V  A+ +F      G++P  VV + L+
Sbjct: 484 KELISEIMNNGM--HLDIVLFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLM 541

Query: 236 HGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLN 295
            G+C  G  E+   +F  M+  G  PN + +  +++  CK G+I+E   L   M+Q+G+ 
Sbjct: 542 DGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIK 601

Query: 296 PDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSL 355
           P    YN ++DG    GR   A+  F  M   G      +Y+I++ G  K    +EA+ L
Sbjct: 602 PSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFL 661

Query: 356 YRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCK 415
           ++++ +  V+  +IT NT+++G+FQ  +   A+ LF  +    + P + TY+I+I  L K
Sbjct: 662 FKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIK 721

Query: 416 NNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVT 475
              V+EA  +F  ++    E    + N ++  L K   +  A     K+ ++      +T
Sbjct: 722 EGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLT 781

Query: 476 YSIMIHGLCRKGKLEKANDFL 496
             +++     KG   +   FL
Sbjct: 782 TMLLVDLFSSKGTCREHIRFL 802


>gi|359492658|ref|XP_002281859.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g19290-like [Vitis vinifera]
          Length = 939

 Score =  273 bits (699), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 161/547 (29%), Positives = 270/547 (49%), Gaps = 45/547 (8%)

Query: 59  ARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILIN 118
           A Y F  M      P + S N L   + KN         Y++++ +G++PD   ++I++N
Sbjct: 175 ALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVN 234

Query: 119 CFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKM 178
            F       C + ++ EA    K M   GV P+++TY +LING+   G++  A  + K M
Sbjct: 235 AF-------CKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFM 287

Query: 179 VSGDYENGLISKTNIF------------------------------SYSIIIDSLCKEGL 208
                   +++ T +                               +Y ++ID  C+ G 
Sbjct: 288 SEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGK 347

Query: 209 VDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNV 268
           +D A  L  EM   G+   + +C +LI+G+C  G   E  G+   M+D   +P+  ++N 
Sbjct: 348 IDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNT 407

Query: 269 MIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKG 328
           ++D  C+ G  +EA  L + M+Q G+ P   TYN+L+ G C VG  D A +I+  M  +G
Sbjct: 408 LLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRG 467

Query: 329 CKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQ 388
                V Y+ L++G  K+ N E A +L++ I++ G  ++ IT+NT++SGL + G+   A+
Sbjct: 468 VAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAE 527

Query: 389 KLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGL 448
           ++FD+MK     PD  TY  LIDG CK + V +A K+   +E       IE++N LI GL
Sbjct: 528 EIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGL 587

Query: 449 CKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNV 508
            K+ RL    +L  ++  +GL P +VTY  +I G C++G L+KA      M +NG + N+
Sbjct: 588 FKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANI 647

Query: 509 VTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVS 568
           +  +T++ G  +  +  +   L+ KM   +    PD   F      L  D +Y     ++
Sbjct: 648 IICSTMVSGLYRLGRIDEANLLMQKMV--DHGFFPDHECF------LKSDIRYAAIQKIA 699

Query: 569 KSSYRAC 575
            S   +C
Sbjct: 700 DSLDESC 706



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 151/552 (27%), Positives = 250/552 (45%), Gaps = 82/552 (14%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
           P   ++ +L     +    D  +    +++ +GL  +    N LIN       G C    
Sbjct: 330 PDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLIN-------GYCKRGE 382

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
           I EA  +   M+ + ++PD  +Y TL++G+CR G+ S A  L  KM+    E        
Sbjct: 383 IHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIE------PT 436

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
           + +Y+ ++  LC+ G  D A +++  M  RG+ P  V  +TL+ G     N+E  + L+ 
Sbjct: 437 VLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWK 496

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
           ++L  G   + +TFN MI  LCK GK+ EA  + + M   G +PD  TY +L+DGYC   
Sbjct: 497 DILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKAS 556

Query: 313 RIDTA-----------------------------------REIFLSMHSKGCKHTVVSYN 337
            +  A                                    ++   M  +G    +V+Y 
Sbjct: 557 NVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYG 616

Query: 338 ILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLY 397
            LI+G+CK   +++A S Y ++  NG+   +I  +T++SGL++ G+   A  L  +M  +
Sbjct: 617 ALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDH 676

Query: 398 NVEPDLS--------------------------------TYNILIDGLCKNNCVQEAVKL 425
              PD                                   YNI I GLCK   V +A + 
Sbjct: 677 GFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRF 736

Query: 426 FHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCR 485
           F ML +  F      +  LI G   AG +D A+ L  ++ ++GLVP +VTY+ +I+GLC+
Sbjct: 737 FSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCK 796

Query: 486 KGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDD 545
              +++A      + + G  PNVVT+NTL+ G+ +        +L  KM   E  + P  
Sbjct: 797 SENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMI--EEGISPSV 854

Query: 546 TTFSIVVDLLAK 557
            T+S +++ L K
Sbjct: 855 VTYSALINGLCK 866



 Score =  223 bits (568), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 148/497 (29%), Positives = 246/497 (49%), Gaps = 26/497 (5%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
           N  L   C+ G    ++A   +  M     +P    ++ L   + K  +++   + ++ +
Sbjct: 441 NTLLKGLCRVGA--FDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDI 498

Query: 102 VSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLING 161
           ++ G     +T N +I+       GLC   ++ EA  +F  M   G  PD ITY TLI+G
Sbjct: 499 LARGFTKSRITFNTMIS-------GLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDG 551

Query: 162 FCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKG 221
           +C+  N+  A +     V G  E   IS + I  Y+ +I  L K   + +  +L  EM  
Sbjct: 552 YCKASNVGQAFK-----VKGAMEREPISPS-IEMYNSLISGLFKSRRLVEVTDLLTEMGI 605

Query: 222 RGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINE 281
           RG+ P +V    LI G+C  G  ++    + EM + G   N++  + M+  L + G+I+E
Sbjct: 606 RGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDE 665

Query: 282 ANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTV----VSYN 337
           AN L++ M+  G  PD   +      Y  + +I  + +       + CK  +    + YN
Sbjct: 666 ANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLD-------ESCKTFLLPNNIVYN 718

Query: 338 ILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLY 397
           I I G CK   V++A   +  +   G      TY TL+ G   AG    A +L DEM   
Sbjct: 719 IAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRR 778

Query: 398 NVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNA 457
            + P++ TYN LI+GLCK+  V  A +LFH L        +  +N LIDG CK G +D A
Sbjct: 779 GLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAA 838

Query: 458 WELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHG 517
           ++L  K+ ++G+ P+VVTYS +I+GLC+ G +E++   L  M K G    ++ + TL+ G
Sbjct: 839 FKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGVDSKLIEYCTLVQG 898

Query: 518 FLQNNKTSKVVELLHKM 534
           ++++ +  K+ +L   M
Sbjct: 899 YIRSGEMQKIHKLYDMM 915



 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 147/553 (26%), Positives = 263/553 (47%), Gaps = 71/553 (12%)

Query: 62  FFGYMTHMQP-SPPISSFNLLFGAVAKNRHYDAVISFYRKLVS---------------IG 105
           FF +++  Q   P + S+  L   +++ R YD   ++  +LV                +G
Sbjct: 88  FFQFVSKQQNFRPNVKSYCKLVHILSRGRMYDETRAYLNQLVDLCKFKDRGNVIWDELVG 147

Query: 106 LLPDF----LTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLING 161
           +  +F       ++++  +   E+GL      K A ++F NM   G  P + +  +L+N 
Sbjct: 148 VYREFAFSPTVFDMILKVY--VEKGL-----TKNALYVFDNMGKCGRIPSLRSCNSLLNN 200

Query: 162 FCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKG 221
             + G    A  ++++M+      G++   ++F  SI++++ CK+G VD+A     +M+ 
Sbjct: 201 LVKNGETHTAHYVYQQMI----RVGIVP--DVFMVSIMVNAFCKDGKVDEAAGFVKKMEN 254

Query: 222 RGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINE 281
            G+ P +V   +LI+G+   G+ E   G+   M + G   N++T+ ++I   CK  K++E
Sbjct: 255 LGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDE 314

Query: 282 ANGLLELMIQR-GLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILI 340
           A  +L  M +   L PD   Y  L+DGYC  G+ID A  +   M   G K  +   N LI
Sbjct: 315 AEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLI 374

Query: 341 NGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVE 400
           NGYCK   + EA  +  +++   ++    +YNTLL G  + G    A  L D+M    +E
Sbjct: 375 NGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIE 434

Query: 401 PDLSTYNILIDGLCKNNCVQEAVKLFHML--------------------EMNKFEFGIEI 440
           P + TYN L+ GLC+     +A++++H++                    +M  FE    +
Sbjct: 435 PTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTL 494

Query: 441 ---------------FNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCR 485
                          FN +I GLCK G++  A E+F K+   G  P  +TY  +I G C+
Sbjct: 495 WKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCK 554

Query: 486 KGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDD 545
              + +A      ME+   +P++  +N+L+ G  ++ +  +V +LL +M    R L P+ 
Sbjct: 555 ASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMG--IRGLTPNI 612

Query: 546 TTFSIVVDLLAKD 558
            T+  ++D   K+
Sbjct: 613 VTYGALIDGWCKE 625



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 120/374 (32%), Positives = 179/374 (47%), Gaps = 35/374 (9%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CK+   N+ +A    G M     SP I  +N L   + K+R    V     ++   GL P
Sbjct: 553 CKAS--NVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTP 610

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           + +T   LI+       G C E  + +A   +  M   G+  ++I   T+++G  R G +
Sbjct: 611 NIVTYGALID-------GWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRI 663

Query: 169 SVALRLHKKMVS------------GDYENGLISKT--------------NIFSYSIIIDS 202
             A  L +KMV              D     I K               N   Y+I I  
Sbjct: 664 DEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAG 723

Query: 203 LCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPN 262
           LCK G VD A+  F  +  +G  P      TLIHG+  AGN +E   L  EML  G  PN
Sbjct: 724 LCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPN 783

Query: 263 LLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFL 322
           ++T+N +I+ LCK   ++ A  L   + Q+GL P+  TYN+L+DGYC +G +D A ++  
Sbjct: 784 IVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKD 843

Query: 323 SMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAG 382
            M  +G   +VV+Y+ LING CK  ++E +M L  Q+I  GV   +I Y TL+ G  ++G
Sbjct: 844 KMIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGVDSKLIEYCTLVQGYIRSG 903

Query: 383 QAGYAQKLFDEMKL 396
           +     KL+D M +
Sbjct: 904 EMQKIHKLYDMMHI 917



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 117/466 (25%), Positives = 220/466 (47%), Gaps = 41/466 (8%)

Query: 196 YSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEML 255
           + +I+    ++GL   A  +F  M   G  P++  C +L++     G     + ++ +M+
Sbjct: 159 FDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMI 218

Query: 256 DLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRID 315
            +G  P++   ++M++  CK GK++EA G ++ M   G+ P+  TY+SL++GY  +G ++
Sbjct: 219 RVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVE 278

Query: 316 TAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYR------------------ 357
            A+ +   M  KG    VV+Y +LI GYCK   ++EA  + R                  
Sbjct: 279 AAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVL 338

Query: 358 ------------------QIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNV 399
                             +++  G++  +   N+L++G  + G+   A+ +   M  +N+
Sbjct: 339 IDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNL 398

Query: 400 EPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWE 459
           +PD  +YN L+DG C+     EA  L   +     E  +  +N L+ GLC+ G  D+A +
Sbjct: 399 KPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQ 458

Query: 460 LFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFL 519
           ++H + ++G+ P  V YS ++ GL +    E A+     +   G   + +TFNT++ G  
Sbjct: 459 IWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLC 518

Query: 520 QNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKSSYRACLYVT 579
           +  K  +  E+  KM   +    PD  T+  ++D   K     +   V  +  R  +  +
Sbjct: 519 KMGKMVEAEEIFDKMK--DLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPS 576

Query: 580 IFQPSSLGSMIGCTVRLMPQPEMSDTLGDDGDGNAGPIILSAVLLI 625
           I   +SL S +  + RL+   E++D L + G     P I++   LI
Sbjct: 577 IEMYNSLISGLFKSRRLV---EVTDLLTEMGIRGLTPNIVTYGALI 619



 Score = 95.5 bits (236), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 63/227 (27%), Positives = 110/227 (48%), Gaps = 13/227 (5%)

Query: 78  FNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEAT 137
           +N+    + K    D    F+  L   G +PD  T   LI+       G      + EA 
Sbjct: 717 YNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIH-------GYSAAGNVDEAF 769

Query: 138 WLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYS 197
            L   M+  G+ P+++TY  LING C++ N+  A RL  K+    ++ GL    N+ +Y+
Sbjct: 770 RLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKL----HQKGLFP--NVVTYN 823

Query: 198 IIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDL 257
            +ID  CK G +D A +L  +M   GI+P+VV  + LI+G C  G+ E    L  +M+  
Sbjct: 824 TLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKA 883

Query: 258 GPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSL 304
           G    L+ +  ++    + G++ + + L ++M  R L+    ++  +
Sbjct: 884 GVDSKLIEYCTLVQGYIRSGEMQKIHKLYDMMHIRCLSTTAISHKQV 930


>gi|302769784|ref|XP_002968311.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
 gi|300163955|gb|EFJ30565.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
          Length = 600

 Score =  273 bits (697), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 169/527 (32%), Positives = 265/527 (50%), Gaps = 26/527 (4%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
           N  L   C  G   +++A+  +  M     SP + ++N L     K    D  +  +   
Sbjct: 89  NALLSGLCNGG--RMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGKLDEALKIFDGA 146

Query: 102 VSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLING 161
           V  G +PD +T N LIN       G C  +++ EA  + + M++  + PDV+TY +L+NG
Sbjct: 147 VKRGFVPDVVTYNALIN-------GFCKADKLDEAQRILQRMVSESLVPDVVTYNSLVNG 199

Query: 162 FCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKE-GLVDKAKELFLEMK 220
            C+ G +  A  L   +V   +        N+ +YS +I  LC+E   ++ A++L  +M 
Sbjct: 200 LCKNGRVDEARML---IVDKGFS------PNVITYSTLISGLCRELRRLESARQLLEKMV 250

Query: 221 GRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKIN 280
             G  P +V    LIHG        E   LF  +L  G  P + T+N++ID L K  ++N
Sbjct: 251 LNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNILIDGLLKEDRVN 310

Query: 281 EANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILI 340
           EA  L   +++ GL PD  TY   +DG C  GR++ A  +   M  KGC   VVS+N +I
Sbjct: 311 EAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVI 370

Query: 341 NGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVE 400
           NG CK   V+EA  L   + + G     I++NTL+ G  +AG+   A   F EM    V+
Sbjct: 371 NGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVK 430

Query: 401 PDLSTYNILIDGLCK---NNCVQEAVKLFH-MLEMNKFEFGIEIFNCLIDGLCKAGRLDN 456
           P + TYNIL+DGLCK      ++EA+ LF  M+E  +    +  ++ LIDGL KAG+LD+
Sbjct: 431 PTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVP-DVVTYSALIDGLGKAGKLDD 489

Query: 457 AWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMH 516
           A  L   +  KG +P V TY+ +I GLC   K+++A +  + M + GC P+ +T+ T++ 
Sbjct: 490 ARRLLGAMEAKGCIPNVYTYNSLISGLCGLDKVDEALELFVAMVEKGCVPDTITYGTIIS 549

Query: 517 GFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
              +     K + L       E  +VP    +  ++D L    +  E
Sbjct: 550 ALCKQEMVDKALALFD--GSLEAGVVPTSGMYFSLIDGLCAVARVDE 594



 Score =  261 bits (668), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 159/496 (32%), Positives = 258/496 (52%), Gaps = 23/496 (4%)

Query: 72  SPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVEN 131
           SP   +  +L  ++ K+   +    F  +L+  GL  D  T NI I+       GLC  +
Sbjct: 13  SPDAYTVGILLRSLLKSGKIEKAHRFVEQLLVKGLC-DISTFNIYIS-------GLCRAS 64

Query: 132 RIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKT 191
           RI +A  +F  M   G  P+ ITY  L++G C  G +S A  L+++M+   Y        
Sbjct: 65  RIGDAQTVFDGMRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYS------P 118

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
           ++ +Y+ ++   CK G +D+A ++F     RG  P VV    LI+GFC A   +E   + 
Sbjct: 119 DVVTYNTLLHGFCKVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRIL 178

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCL- 310
             M+     P+++T+N +++ LCK G+++EA     L++ +G +P+  TY++L+ G C  
Sbjct: 179 QRMVSESLVPDVVTYNSLVNGLCKNGRVDEAR---MLIVDKGFSPNVITYSTLISGLCRE 235

Query: 311 VGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVIT 370
           + R+++AR++   M   GCK  +VSYN LI+G  +   V EA+ L+  ++  G    V T
Sbjct: 236 LRRLESARQLLEKMVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPT 295

Query: 371 YNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLE 430
           YN L+ GL +  +   A +LF  +  + +EPD  TY + IDGLCK   V++A+ +   ++
Sbjct: 296 YNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMD 355

Query: 431 MNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLE 490
                  +   N +I+GLCK  R+D A  L   +  KG  P  ++++ +I G CR GK +
Sbjct: 356 EKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWK 415

Query: 491 KANDFLLYMEKNGCAPNVVTFNTLMHGFL---QNNKTSKVVELLHKMAEPERNLVPDDTT 547
           KA      M K G  P VVT+N L+ G     Q  +  + + L   M E  R  VPD  T
Sbjct: 416 KAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGR--VPDVVT 473

Query: 548 FSIVVDLLAKDEKYHE 563
           +S ++D L K  K  +
Sbjct: 474 YSALIDGLGKAGKLDD 489



 Score =  235 bits (599), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 159/495 (32%), Positives = 247/495 (49%), Gaps = 40/495 (8%)

Query: 29  RQIAAVSSPET-QLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAK 87
           R I A  SP+    N  LH  CK G   L+EA   F         P + ++N L     K
Sbjct: 110 RMIKAGYSPDVVTYNTLLHGFCKVG--KLDEALKIFDGAVKRGFVPDVVTYNALINGFCK 167

Query: 88  NRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKER---------------------- 125
               D      +++VS  L+PD +T N L+N      R                      
Sbjct: 168 ADKLDEAQRILQRMVSESLVPDVVTYNSLVNGLCKNGRVDEARMLIVDKGFSPNVITYST 227

Query: 126 ---GLCVE-NRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSG 181
              GLC E  R++ A  L + M+  G +PD+++Y  LI+G  R   +S AL+L   ++  
Sbjct: 228 LISGLCRELRRLESARQLLEKMVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQ 287

Query: 182 DYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCA 241
            YE        + +Y+I+ID L KE  V++A ELF  +   G+ P  +  T  I G C A
Sbjct: 288 GYE------PEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKA 341

Query: 242 GNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTY 301
           G  E+   +  +M + G  P++++ N +I+ LCK  +++EA  LL  M  +G +P+  ++
Sbjct: 342 GRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISF 401

Query: 302 NSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILN---VEEAMSLYRQ 358
           N+L+ G C  G+   A   F  M  +G K TVV+YNIL++G CK      ++EA++L+  
Sbjct: 402 NTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDA 461

Query: 359 IISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNC 418
           +I  G    V+TY+ L+ GL +AG+   A++L   M+     P++ TYN LI GLC  + 
Sbjct: 462 MIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLDK 521

Query: 419 VQEAVKLF-HMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYS 477
           V EA++LF  M+E       I  +  +I  LCK   +D A  LF    + G+VPT   Y 
Sbjct: 522 VDEALELFVAMVEKGCVPDTI-TYGTIISALCKQEMVDKALALFDGSLEAGVVPTSGMYF 580

Query: 478 IMIHGLCRKGKLEKA 492
            +I GLC   ++++A
Sbjct: 581 SLIDGLCAVARVDEA 595



 Score =  224 bits (572), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 133/376 (35%), Positives = 198/376 (52%), Gaps = 16/376 (4%)

Query: 55  NLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLN 114
            L  AR     M      P I S+N L   +A+ +     +  +  ++  G  P+  T N
Sbjct: 238 RLESARQLLEKMVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYN 297

Query: 115 ILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRL 174
           ILI+       GL  E+R+ EA  LF  ++  G+ PD ITY   I+G C+ G +  AL +
Sbjct: 298 ILID-------GLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLM 350

Query: 175 HKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTL 234
            K M     E G +   ++ S++ +I+ LCKE  VD+A+ L   M+ +G +P  +   TL
Sbjct: 351 LKDM----DEKGCVP--DVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTL 404

Query: 235 IHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKG---GKINEANGLLELMIQ 291
           I G C AG W++    F EML  G +P ++T+N+++D LCK    G+I EA  L + MI+
Sbjct: 405 ICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIE 464

Query: 292 RGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEE 351
           +G  PD  TY++L+DG    G++D AR +  +M +KGC   V +YN LI+G C +  V+E
Sbjct: 465 KGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLDKVDE 524

Query: 352 AMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILID 411
           A+ L+  ++  G     ITY T++S L +      A  LFD      V P    Y  LID
Sbjct: 525 ALELFVAMVEKGCVPDTITYGTIISALCKQEMVDKALALFDGSLEAGVVPTSGMYFSLID 584

Query: 412 GLCKNNCVQEAVKLFH 427
           GLC    V EA+KL  
Sbjct: 585 GLCAVARVDEALKLLQ 600



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 125/398 (31%), Positives = 212/398 (53%), Gaps = 36/398 (9%)

Query: 188 ISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEV 247
           I   + ++  I++ SL K G ++KA     ++  +G+   +      I G C A    + 
Sbjct: 11  IYSPDAYTVGILLRSLLKSGKIEKAHRFVEQLLVKGLCD-ISTFNIYISGLCRASRIGDA 69

Query: 248 NGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDG 307
             +F  M   G  PN +T+N ++  LC GG++++A  L E MI+ G +PD  TYN+L+ G
Sbjct: 70  QTVFDGMRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHG 129

Query: 308 YCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQT 367
           +C VG++D A +IF     +G    VV+YN LING+CK   ++EA  + ++++S  +   
Sbjct: 130 FCKVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSESLVPD 189

Query: 368 VITYNTLLSGLFQAGQA----------GY-----------------------AQKLFDEM 394
           V+TYN+L++GL + G+           G+                       A++L ++M
Sbjct: 190 VVTYNSLVNGLCKNGRVDEARMLIVDKGFSPNVITYSTLISGLCRELRRLESARQLLEKM 249

Query: 395 KLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRL 454
            L   +PD+ +YN LI GL +   V EA+KLF  +    +E  +  +N LIDGL K  R+
Sbjct: 250 VLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNILIDGLLKEDRV 309

Query: 455 DNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTL 514
           + A+ELF  L + GL P  +TY++ I GLC+ G++E A   L  M++ GC P+VV+ N +
Sbjct: 310 NEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAV 369

Query: 515 MHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVV 552
           ++G  +  +  +   LL  M    +   P+  +F+ ++
Sbjct: 370 INGLCKEKRVDEAEVLLSGM--EAKGCSPNAISFNTLI 405


>gi|357160857|ref|XP_003578899.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Brachypodium distachyon]
          Length = 714

 Score =  273 bits (697), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 170/533 (31%), Positives = 260/533 (48%), Gaps = 24/533 (4%)

Query: 23  SLFKSPRQIAAVSSPETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLF 82
            L  S  +++   S E Q  + +  +C +  ++       F  M     +P +   N + 
Sbjct: 148 QLLNSLLRMSTKFSAECQAQKSVPASCSTQCLSA------FQEMARHGVAPFVKECNCVL 201

Query: 83  GAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKN 142
             +     +D + + Y  ++ +G+ P   T N L++ F       C   R+ +A  L K+
Sbjct: 202 RVLRDAARWDDMRAVYSDMLQLGVEPSIFTYNTLLDSF-------CKAGRMDQAVALLKD 254

Query: 143 M--IAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIII 200
           M   A G  P+ +TY  +ING  R G L  A +L   M        L  K + F+Y+ +I
Sbjct: 255 MEARAAGCLPNDVTYNVVINGLARKGELEKAAQLVDIM-------RLSKKASAFTYNPLI 307

Query: 201 DSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPR 260
             L     V+KA  L LEM+  GI P VV   TLI G    GN E     F EM   G  
Sbjct: 308 TGLLARDFVEKAGALLLEMENEGIVPTVVTYNTLIDGLFKTGNAEAAQVKFDEMRAKGLL 367

Query: 261 PNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREI 320
           P+L+T+N +I+  CK G + +A  L   + + GL P   TYN L+DGYC +G ++ AR +
Sbjct: 368 PDLITYNSLINGYCKAGNLKQALCLFGDLKRAGLGPTVLTYNILIDGYCRLGDLEGARRL 427

Query: 321 FLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQ 380
              M  + C   V +Y IL+NG C + N+      + +++S G+      YNT +S    
Sbjct: 428 KEEMTEEDCLPDVCTYTILMNGSCMVRNLAMVRIFFDEMLSKGLEPDCFAYNTRISAELT 487

Query: 381 AGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEI 440
            G    A +L +EM L  +  D  TYN+LIDGLCK   +++A  L+  +  +        
Sbjct: 488 IGAITNAFQLREEMMLRGISSDTVTYNVLIDGLCKTGSLKDAYVLWMKMVTDGLRLDCVT 547

Query: 441 FNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYME 500
           + CLI   C+ GRL  A  +F  +   GL P+VVTY+I IH  CR+G L  A  +   M 
Sbjct: 548 YTCLIHAHCERGRLIEAKNIFDGMVASGLSPSVVTYTIFIHTYCRRGNLYLAYGWFRKML 607

Query: 501 KNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
           + G  PN VT+N LMH   +  +T    +  H+M   ER LVP+  T+++++D
Sbjct: 608 EEGVEPNEVTYNVLMHALCRMGRTESAYQHFHEML--ERGLVPNKYTYTLLID 658


>gi|357500143|ref|XP_003620360.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495375|gb|AES76578.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 426

 Score =  272 bits (695), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 158/428 (36%), Positives = 236/428 (55%), Gaps = 36/428 (8%)

Query: 96  SFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITY 155
           S   K++ IG  PD +TL  L+       +GLC+ N +K+A     ++IA G R D ++Y
Sbjct: 31  SVLAKILKIGYQPDTVTLTTLL-------KGLCINNEVKKALHFHDDVIAKGFRLDNVSY 83

Query: 156 GTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKEL 215
           GTLING C++G                         + F YS+II+ LCK+ LV  A +L
Sbjct: 84  GTLINGLCKSGETKAP--------------------DQFMYSMIINRLCKDKLVVDAYDL 123

Query: 216 FLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCK 275
           + EM  + I P VV   TLI+GFC  G  E+   LF EM      PN+ +FN++ID LCK
Sbjct: 124 YCEMVVKRIFPDVVTYNTLIYGFCIVGQLEDAIRLFNEMRLKNIVPNVCSFNILIDGLCK 183

Query: 276 GGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVS 335
            G +     +L +MI++ + PD  T +SL+DGY LV + + AR IF +M   G    + S
Sbjct: 184 EGDVKGGKSVLAVMIKQSVKPDVVTCSSLIDGYFLVKKANKARYIFNAMAQNGVTIDLRS 243

Query: 336 YNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMK 395
           YNI+ING  K   V+EA+ L++++    +    ITY+TL+ GL + G+  Y   L DEM+
Sbjct: 244 YNIMINGLSKAKMVDEAVILFKEMQFKSMTPDTITYSTLIDGLGKLGRISYVWDLIDEMR 303

Query: 396 LYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLD 455
                 ++ TY+ L++ LCK+     A+++F  ++   FE  +  +N L+DGLCK GRL 
Sbjct: 304 ATGRSANVITYSSLLNVLCKSGHFDTAIRIFTKIKDKGFEPNMVTYNILVDGLCKNGRLK 363

Query: 456 NAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLM 515
           +A E+FH L  KG    V  Y++MI+GLCR+          L+ E  GC PN VT+  ++
Sbjct: 364 DAQEIFHDLLIKGYRLDVRLYTVMINGLCREA---------LFDEAYGCTPNAVTYEIII 414

Query: 516 HGFLQNNK 523
               +N+K
Sbjct: 415 RALFKNDK 422



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 119/417 (28%), Positives = 205/417 (49%), Gaps = 22/417 (5%)

Query: 147 GVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKE 206
           G++ D+I    LIN F     L+ A  +  K++   Y+   ++ T +         LC  
Sbjct: 5   GIQRDIINLSILINSFYHLCQLNYAFSVLAKILKIGYQPDTVTLTTLLK------GLCIN 58

Query: 207 GLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTF 266
             V KA     ++  +G     V   TLI+G C +G  +               P+   +
Sbjct: 59  NEVKKALHFHDDVIAKGFRLDNVSYGTLINGLCKSGETKA--------------PDQFMY 104

Query: 267 NVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHS 326
           +++I+ LCK   + +A  L   M+ + + PD  TYN+L+ G+C+VG+++ A  +F  M  
Sbjct: 105 SMIINRLCKDKLVVDAYDLYCEMVVKRIFPDVVTYNTLIYGFCIVGQLEDAIRLFNEMRL 164

Query: 327 KGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGY 386
           K     V S+NILI+G CK  +V+   S+   +I   V+  V+T ++L+ G F   +A  
Sbjct: 165 KNIVPNVCSFNILIDGLCKEGDVKGGKSVLAVMIKQSVKPDVVTCSSLIDGYFLVKKANK 224

Query: 387 AQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLID 446
           A+ +F+ M    V  DL +YNI+I+GL K   V EAV LF  ++          ++ LID
Sbjct: 225 ARYIFNAMAQNGVTIDLRSYNIMINGLSKAKMVDEAVILFKEMQFKSMTPDTITYSTLID 284

Query: 447 GLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAP 506
           GL K GR+   W+L  ++   G    V+TYS +++ LC+ G  + A      ++  G  P
Sbjct: 285 GLGKLGRISYVWDLIDEMRATGRSANVITYSSLLNVLCKSGHFDTAIRIFTKIKDKGFEP 344

Query: 507 NVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
           N+VT+N L+ G  +N +     E+ H +      L  D   ++++++ L ++  + E
Sbjct: 345 NMVTYNILVDGLCKNGRLKDAQEIFHDLLIKGYRL--DVRLYTVMINGLCREALFDE 399



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 70/279 (25%), Positives = 143/279 (51%), Gaps = 16/279 (5%)

Query: 292 RGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEE 351
           RG+  D    + L++ +  + +++ A  +   +   G +   V+   L+ G C    V++
Sbjct: 4   RGIQRDIINLSILINSFYHLCQLNYAFSVLAKILKIGYQPDTVTLTTLLKGLCINNEVKK 63

Query: 352 AMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILID 411
           A+  +  +I+ G R   ++Y TL++GL ++G+                 PD   Y+++I+
Sbjct: 64  ALHFHDDVIAKGFRLDNVSYGTLINGLCKSGETK--------------APDQFMYSMIIN 109

Query: 412 GLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVP 471
            LCK+  V +A  L+  + + +    +  +N LI G C  G+L++A  LF+++  K +VP
Sbjct: 110 RLCKDKLVVDAYDLYCEMVVKRIFPDVVTYNTLIYGFCIVGQLEDAIRLFNEMRLKNIVP 169

Query: 472 TVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELL 531
            V +++I+I GLC++G ++     L  M K    P+VVT ++L+ G+    K +K   + 
Sbjct: 170 NVCSFNILIDGLCKEGDVKGGKSVLAVMIKQSVKPDVVTCSSLIDGYFLVKKANKARYIF 229

Query: 532 HKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKS 570
           + MA  +  +  D  +++I+++ L+K +   E   + K 
Sbjct: 230 NAMA--QNGVTIDLRSYNIMINGLSKAKMVDEAVILFKE 266



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 77/304 (25%), Positives = 137/304 (45%), Gaps = 24/304 (7%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
           N  ++  C  G   L +A   F  M      P + SFN+L   + K        S    +
Sbjct: 140 NTLIYGFCIVG--QLEDAIRLFNEMRLKNIVPNVCSFNILIDGLCKEGDVKGGKSVLAVM 197

Query: 102 VSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLING 161
           +   + PD +T + LI+       G  +  +  +A ++F  M   GV  D+ +Y  +ING
Sbjct: 198 IKQSVKPDVVTCSSLID-------GYFLVKKANKARYIFNAMAQNGVTIDLRSYNIMING 250

Query: 162 FCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKG 221
             +   +  A+ L K+M         I      +YS +ID L K G +    +L  EM+ 
Sbjct: 251 LSKAKMVDEAVILFKEMQFKSMTPDTI------TYSTLIDGLGKLGRISYVWDLIDEMRA 304

Query: 222 RGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINE 281
            G +  V+  ++L++  C +G+++    +F ++ D G  PN++T+N+++D LCK G++ +
Sbjct: 305 TGRSANVITYSSLLNVLCKSGHFDTAIRIFTKIKDKGFEPNMVTYNILVDGLCKNGRLKD 364

Query: 282 ANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILIN 341
           A  +   ++ +G   D   Y  +++G C     D A          GC    V+Y I+I 
Sbjct: 365 AQEIFHDLLIKGYRLDVRLYTVMINGLCREALFDEAY---------GCTPNAVTYEIIIR 415

Query: 342 GYCK 345
              K
Sbjct: 416 ALFK 419



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 61/222 (27%), Positives = 109/222 (49%), Gaps = 22/222 (9%)

Query: 57  NEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNIL 116
           N+ARY F  M     +  + S+N++   ++K +  D  +  ++++    + PD +T + L
Sbjct: 223 NKARYIFNAMAQNGVTIDLRSYNIMINGLSKAKMVDEAVILFKEMQFKSMTPDTITYSTL 282

Query: 117 INCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHK 176
           I+       GL    RI     L   M A G   +VITY +L+N  C++G+   A+R+  
Sbjct: 283 ID-------GLGKLGRISYVWDLIDEMRATGRSANVITYSSLLNVLCKSGHFDTAIRIFT 335

Query: 177 KMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIH 236
           K+    +E       N+ +Y+I++D LCK G +  A+E+F ++  +G    V + T +I+
Sbjct: 336 KIKDKGFE------PNMVTYNILVDGLCKNGRLKDAQEIFHDLLIKGYRLDVRLYTVMIN 389

Query: 237 GFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGK 278
           G C    ++E           G  PN +T+ ++I  L K  K
Sbjct: 390 GLCREALFDEA---------YGCTPNAVTYEIIIRALFKNDK 422


>gi|147780655|emb|CAN66818.1| hypothetical protein VITISV_004776 [Vitis vinifera]
          Length = 1037

 Score =  271 bits (694), Expect = 6e-70,   Method: Compositional matrix adjust.
 Identities = 161/547 (29%), Positives = 269/547 (49%), Gaps = 45/547 (8%)

Query: 59  ARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILIN 118
           A Y F  M      P + S N L   + KN         Y++++ +G++PD   ++I++N
Sbjct: 175 ALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVN 234

Query: 119 CFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKM 178
            F       C + ++ EA    K M   GV P+++TY +LING+   G++  A  + K M
Sbjct: 235 AF-------CKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFM 287

Query: 179 VSGDYENGLISKTNIF------------------------------SYSIIIDSLCKEGL 208
                   +++ T +                               +Y ++ID  C+ G 
Sbjct: 288 SEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGK 347

Query: 209 VDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNV 268
           +D A  L  EM   G+   + +C +LI+G+C  G   E  G+   M+D   +P+  ++N 
Sbjct: 348 IDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNT 407

Query: 269 MIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKG 328
           ++D  C+ G  +EA  L + M+Q G+ P   TYN+L+ G C VG  D A +I+  M   G
Sbjct: 408 LLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKXG 467

Query: 329 CKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQ 388
                V Y+ L++G  K+ N E A +L++ I++ G  ++ IT+NT++SGL + G+   A+
Sbjct: 468 VAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAE 527

Query: 389 KLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGL 448
           ++FD+MK     PD  TY  LIDG CK + V +A K+   +E       IE++N LI GL
Sbjct: 528 EIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREXISPSIEMYNSLISGL 587

Query: 449 CKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNV 508
            K+ RL    +L  ++  +GL P +VTY  +I G C++G L+KA      M +NG + N+
Sbjct: 588 FKSRRLVEXTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANI 647

Query: 509 VTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVS 568
           +  +T++ G  +  +  +   L+ KM   +    PD   F      L  D +Y     ++
Sbjct: 648 IICSTMVSGLYRLGRIDEANLLMQKMV--DHGFFPDHECF------LKSDIRYAAIQKIA 699

Query: 569 KSSYRAC 575
            S   +C
Sbjct: 700 DSLDESC 706



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 152/501 (30%), Positives = 245/501 (48%), Gaps = 33/501 (6%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
           N  L   C+ G    ++A   +  M     +P    ++ L   + K  +++   + ++ +
Sbjct: 441 NTLLKGLCRVGA--FDDALQIWHLMMKXGVAPDEVGYSTLLDGLFKMENFEGASTLWKDI 498

Query: 102 VSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLING 161
           ++ G     +T N +I+       GLC   ++ EA  +F  M   G  PD ITY TLI+G
Sbjct: 499 LARGFTKSRITFNTMIS-------GLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDG 551

Query: 162 FCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKG 221
           +C+  N+  A +     V G  E   IS + I  Y+ +I  L K   + +  +L  EM  
Sbjct: 552 YCKASNVGQAFK-----VKGAMEREXISPS-IEMYNSLISGLFKSRRLVEXTDLLTEMGI 605

Query: 222 RGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINE 281
           RG+ P +V    LI G+C  G  ++    + EM + G   N++  + M+  L + G+I+E
Sbjct: 606 RGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDE 665

Query: 282 ANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTV----VSYN 337
           AN L++ M+  G  PD   +      Y  + +I  + +       + CK  +    + YN
Sbjct: 666 ANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLD-------ESCKTFLLPNNIVYN 718

Query: 338 ILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLY 397
           I I G CK   V++A   +  +   G      TY TL+ G   AG    A +L DEM   
Sbjct: 719 IAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRR 778

Query: 398 NVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNA 457
            + P++ TYN LI+GLCK+  V  A +LFH L        +  +N LIDG CK G +D A
Sbjct: 779 GLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAA 838

Query: 458 WELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHG 517
           ++L  K+ ++G+ P+VVTYS +I+GLC+ G +E++   L  M K G    ++ + TL+ G
Sbjct: 839 FKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGVDSKLIEYCTLVQG 898

Query: 518 FLQNNKTSKVVELLHKMAEPE 538
                KTS   E    M++PE
Sbjct: 899 GF---KTSNYNE----MSKPE 912



 Score =  208 bits (530), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 146/553 (26%), Positives = 262/553 (47%), Gaps = 71/553 (12%)

Query: 62  FFGYMTHMQP-SPPISSFNLLFGAVAKNRHYDAVISFYRKLVS---------------IG 105
           FF +++  Q   P + S+  L   +++ R YD   ++  +LV                +G
Sbjct: 88  FFQFVSKQQNFRPNVKSYCKLVHILSRGRMYDETRAYLNQLVDLCKFKDRGNVIWDELVG 147

Query: 106 LLPDF----LTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLING 161
           +  +F       ++++  +   E+GL      K A ++F NM   G  P + +  +L+N 
Sbjct: 148 VYREFAFSPTVFDMILKVY--VEKGL-----TKNALYVFDNMGKCGRIPSLRSCNSLLNN 200

Query: 162 FCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKG 221
             + G    A  ++++M+      G++   ++F  SI++++ CK+G VD+A     +M+ 
Sbjct: 201 LVKNGETHTAHYVYQQMI----RVGIVP--DVFMVSIMVNAFCKDGKVDEAAGFVKKMEN 254

Query: 222 RGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINE 281
            G+ P +V   +LI+G+   G+ E   G+   M + G   N++T+ ++I   CK  K++E
Sbjct: 255 LGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDE 314

Query: 282 ANGLLELMIQR-GLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILI 340
           A  +L  M +   L PD   Y  L+DGYC  G+ID A  +   M   G K  +   N LI
Sbjct: 315 AEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLI 374

Query: 341 NGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVE 400
           NGYCK   + EA  +  +++   ++    +YNTLL G  + G    A  L D+M    +E
Sbjct: 375 NGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIE 434

Query: 401 PDLSTYNILIDGLCKNNCVQEAVKLFHML--------------------EMNKFEFGIEI 440
           P + TYN L+ GLC+     +A++++H++                    +M  FE    +
Sbjct: 435 PTVLTYNTLLKGLCRVGAFDDALQIWHLMMKXGVAPDEVGYSTLLDGLFKMENFEGASTL 494

Query: 441 ---------------FNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCR 485
                          FN +I GLCK G++  A E+F K+   G  P  +TY  +I G C+
Sbjct: 495 WKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCK 554

Query: 486 KGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDD 545
              + +A      ME+   +P++  +N+L+ G  ++ +  +  +LL +M    R L P+ 
Sbjct: 555 ASNVGQAFKVKGAMEREXISPSIEMYNSLISGLFKSRRLVEXTDLLTEMG--IRGLTPNI 612

Query: 546 TTFSIVVDLLAKD 558
            T+  ++D   K+
Sbjct: 613 VTYGALIDGWCKE 625



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 117/466 (25%), Positives = 218/466 (46%), Gaps = 41/466 (8%)

Query: 196 YSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEML 255
           + +I+    ++GL   A  +F  M   G  P++  C +L++     G     + ++ +M+
Sbjct: 159 FDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMI 218

Query: 256 DLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRID 315
            +G  P++   ++M++  CK GK++EA G ++ M   G+ P+  TY+SL++GY  +G ++
Sbjct: 219 RVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVE 278

Query: 316 TAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYR------------------ 357
            A+ +   M  KG    VV+Y +LI GYCK   ++EA  + R                  
Sbjct: 279 AAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVL 338

Query: 358 ------------------QIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNV 399
                             +++  G++  +   N+L++G  + G+   A+ +   M  +N+
Sbjct: 339 IDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNL 398

Query: 400 EPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWE 459
           +PD  +YN L+DG C+     EA  L   +     E  +  +N L+ GLC+ G  D+A +
Sbjct: 399 KPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQ 458

Query: 460 LFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFL 519
           ++H + + G+ P  V YS ++ GL +    E A+     +   G   + +TFNT++ G  
Sbjct: 459 IWHLMMKXGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLC 518

Query: 520 QNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKSSYRACLYVT 579
           +  K  +  E+  KM   +    PD  T+  ++D   K     +   V  +  R  +  +
Sbjct: 519 KMGKMVEAEEIFDKMK--DLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREXISPS 576

Query: 580 IFQPSSLGSMIGCTVRLMPQPEMSDTLGDDGDGNAGPIILSAVLLI 625
           I   +SL S +  + RL+   E +D L + G     P I++   LI
Sbjct: 577 IEMYNSLISGLFKSRRLV---EXTDLLTEMGIRGLTPNIVTYGALI 619


>gi|222628658|gb|EEE60790.1| hypothetical protein OsJ_14375 [Oryza sativa Japonica Group]
          Length = 754

 Score =  270 bits (690), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 168/582 (28%), Positives = 285/582 (48%), Gaps = 72/582 (12%)

Query: 56  LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNI 115
           +++A   F  M      P + +++ L   + K +  D      R++V  G+ P+ +T N 
Sbjct: 169 VDKAHDLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNC 228

Query: 116 LINCFGN----KER------------------------GLCVENRIKEATWLFKNMIAFG 147
           LI+ +      KE                          LC   RIKEA  +F +M+  G
Sbjct: 229 LIHGYSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKG 288

Query: 148 VRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEG 207
            +PDVI+YG L++G+   G ++    L   MV      G++   ++F+   +I++  + G
Sbjct: 289 PKPDVISYGALLHGYATAGCIAGMDNLFNVMVC----EGVVPDRHVFN--TLINAYARLG 342

Query: 208 LVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLG--------- 258
           ++DK+  +F +M  +G+NP ++  +T+I  FC  G  ++    F  M+D G         
Sbjct: 343 MMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYS 402

Query: 259 ---------------------------PRPNLLTFNVMIDCLCKGGKINEANGLLELMIQ 291
                                      P P +  F  +I+ LCK G++ E   +++L+I 
Sbjct: 403 CLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIH 462

Query: 292 RGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEE 351
            G  P+  T+NSL+DGYCLVG +  A  +  SM S G +  + +YN L++GYCK   +++
Sbjct: 463 TGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDD 522

Query: 352 AMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILID 411
           A++L+R ++   V  T ++YN +L GLFQA +   A+++F EM    +   + TY  ++ 
Sbjct: 523 ALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIESGMAVSIHTYATVLG 582

Query: 412 GLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVP 471
           GLC+NNC  EA  L   L     +F I  FN +I  + K GR   A ELF  +   GLVP
Sbjct: 583 GLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIRAMFKVGRRQEAKELFAAISTYGLVP 642

Query: 472 TVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELL 531
           T++TY +MI  L ++   E A++    MEK+ C P+    N ++   L   + +K    L
Sbjct: 643 TILTYRVMITNLIKEESFEDADNLFSSMEKSSCTPDSRILNEIIRMLLNKGEVAKAGNYL 702

Query: 532 HKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKSSYR 573
            K+   ++ ++P+ TT S+++ L + + KY E   +    YR
Sbjct: 703 SKID--KKGILPEATTTSLLIYLFSVNGKYREYIKLLPEKYR 742



 Score =  225 bits (573), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 143/502 (28%), Positives = 258/502 (51%), Gaps = 16/502 (3%)

Query: 63  FGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGN 122
           FG +      P + S+N L    +K    D     + K+   G++P+ +T + LIN    
Sbjct: 141 FGRLLRTGLGPDVFSYNALIDGFSKEGEVDKAHDLFYKMEEQGIMPNVVTYSSLIN---- 196

Query: 123 KERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGD 182
              GLC    + +A  + + M+  GVRP+ +TY  LI+G+  +G    ++R+ K+M S  
Sbjct: 197 ---GLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHGYSTSGMWKESVRVFKEMSSS- 252

Query: 183 YENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAG 242
                +   ++ + +  + +LCK G + +A+++F  M  +G  P V+    L+HG+  AG
Sbjct: 253 -----LLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPDVISYGALLHGYATAG 307

Query: 243 NWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYN 302
               ++ LF  M+  G  P+   FN +I+   + G ++++  + E M ++G+NPD  T++
Sbjct: 308 CIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFS 367

Query: 303 SLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISN 362
           +++  +C +GR+D A E F  M   G       Y+ LI G C   ++ +A  L   ++S 
Sbjct: 368 TVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSK 427

Query: 363 GVRQTVIT-YNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQE 421
           G+    I  + ++++ L + G+    + + D +      P+L T+N L+DG C    ++E
Sbjct: 428 GIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKE 487

Query: 422 AVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIH 481
           AV L   +E    E  I  +N L+DG CK GR+D+A  LF  +  K +  T V+Y+I++H
Sbjct: 488 AVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILH 547

Query: 482 GLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNL 541
           GL +  +   A +    M ++G A ++ T+ T++ G  +NN T +   LL K+     N+
Sbjct: 548 GLFQARRTIVAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLF--SMNV 605

Query: 542 VPDDTTFSIVVDLLAKDEKYHE 563
             D  TF+IV+  + K  +  E
Sbjct: 606 KFDILTFNIVIRAMFKVGRRQE 627



 Score =  218 bits (555), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 143/515 (27%), Positives = 247/515 (47%), Gaps = 31/515 (6%)

Query: 35  SSPETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSP-PISSFNLLFGAVAKNRHYDA 93
           + P    +    E  +SG +  ++AR+ F  +   + +P P    N L  A+A+     A
Sbjct: 32  ARPSPPAHAAFRERLRSGTLGPDDARHLFDELLLRRDAPAPARGLNELLSALARAPPSAA 91

Query: 94  -------VISFYRKLVSIG---LLPDFLTLNILINCFGNKER---GLCVENRIKEATWLF 140
                   +  ++++         P   T NILINC+    R   GL V          F
Sbjct: 92  CRDVPALAVELFKRMDRCACPEAAPTIYTYNILINCYRRARRPDLGLPV----------F 141

Query: 141 KNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIII 200
             ++  G+ PDV +Y  LI+GF + G +  A  L  KM     E G++   N+ +YS +I
Sbjct: 142 GRLLRTGLGPDVFSYNALIDGFSKEGEVDKAHDLFYKM----EEQGIMP--NVVTYSSLI 195

Query: 201 DSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPR 260
           + LCK   +DKA+ +  +M G G+ P  +    LIHG+  +G W+E   +F EM      
Sbjct: 196 NGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHGYSTSGMWKESVRVFKEMSSSLLV 255

Query: 261 PNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREI 320
           P++   N  +  LCK G+I EA  + + M+ +G  PD  +Y +L+ GY   G I     +
Sbjct: 256 PDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNL 315

Query: 321 FLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQ 380
           F  M  +G       +N LIN Y ++  +++++ ++  +   GV   +IT++T++S   +
Sbjct: 316 FNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCR 375

Query: 381 AGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLF-HMLEMNKFEFGIE 439
            G+   A + F+ M    V PD + Y+ LI G C    + +A +L   ML        I+
Sbjct: 376 LGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIK 435

Query: 440 IFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYM 499
            F  +I+ LCK GR+    ++   +   G  P ++T++ ++ G C  G +++A   L  M
Sbjct: 436 FFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSM 495

Query: 500 EKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKM 534
           E  G  P++ T+NTL+ G+ ++ +    + L   M
Sbjct: 496 ESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDM 530



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 103/401 (25%), Positives = 180/401 (44%), Gaps = 38/401 (9%)

Query: 189 SKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVN 248
           +   I++Y+I+I+   +    D    +F  +   G+ P V     LI GF   G  ++ +
Sbjct: 114 AAPTIYTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNALIDGFSKEGEVDKAH 173

Query: 249 GLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGY 308
            LF +M + G  PN++T++ +I+ LCK  ++++A  +L  M+  G+ P+  TYN L+ GY
Sbjct: 174 DLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHGY 233

Query: 309 CLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTV 368
              G    +  +F  M S      V + N  +   CK   ++EA  ++  ++  G +  V
Sbjct: 234 STSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPDV 293

Query: 369 ITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHM 428
           I+Y  LL G   AG       LF+ M    V PD   +N LI+   +   + +++ +F  
Sbjct: 294 ISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFED 353

Query: 429 LEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHG------ 482
           +        I  F+ +I   C+ GRLD+A E F+ +   G+ P    YS +I G      
Sbjct: 354 MTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRRD 413

Query: 483 ------------------------------LCRKGKLEKANDFLLYMEKNGCAPNVVTFN 512
                                         LC++G++ +  D +  +   G  PN++TFN
Sbjct: 414 LVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLITFN 473

Query: 513 TLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
           +L+ G+       + V LL  M      + PD  T++ +VD
Sbjct: 474 SLVDGYCLVGNMKEAVGLLDSMESV--GVEPDIYTYNTLVD 512


>gi|32489924|emb|CAE05516.1| OSJNBa0038P21.9 [Oryza sativa Japonica Group]
          Length = 825

 Score =  270 bits (690), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 168/582 (28%), Positives = 285/582 (48%), Gaps = 72/582 (12%)

Query: 56  LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNI 115
           +++A   F  M      P + +++ L   + K +  D      R++V  G+ P+ +T N 
Sbjct: 240 VDKAHDLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNC 299

Query: 116 LINCFGN----KER------------------------GLCVENRIKEATWLFKNMIAFG 147
           LI+ +      KE                          LC   RIKEA  +F +M+  G
Sbjct: 300 LIHGYSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKG 359

Query: 148 VRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEG 207
            +PDVI+YG L++G+   G ++    L   MV      G++   ++F+   +I++  + G
Sbjct: 360 PKPDVISYGALLHGYATAGCIAGMDNLFNVMVC----EGVVPDRHVFN--TLINAYARLG 413

Query: 208 LVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLG--------- 258
           ++DK+  +F +M  +G+NP ++  +T+I  FC  G  ++    F  M+D G         
Sbjct: 414 MMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYS 473

Query: 259 ---------------------------PRPNLLTFNVMIDCLCKGGKINEANGLLELMIQ 291
                                      P P +  F  +I+ LCK G++ E   +++L+I 
Sbjct: 474 CLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIH 533

Query: 292 RGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEE 351
            G  P+  T+NSL+DGYCLVG +  A  +  SM S G +  + +YN L++GYCK   +++
Sbjct: 534 TGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDD 593

Query: 352 AMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILID 411
           A++L+R ++   V  T ++YN +L GLFQA +   A+++F EM    +   + TY  ++ 
Sbjct: 594 ALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIESGMAVSIHTYATVLG 653

Query: 412 GLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVP 471
           GLC+NNC  EA  L   L     +F I  FN +I  + K GR   A ELF  +   GLVP
Sbjct: 654 GLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIRAMFKVGRRQEAKELFAAISTYGLVP 713

Query: 472 TVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELL 531
           T++TY +MI  L ++   E A++    MEK+ C P+    N ++   L   + +K    L
Sbjct: 714 TILTYRVMITNLIKEESFEDADNLFSSMEKSSCTPDSRILNEIIRMLLNKGEVAKAGNYL 773

Query: 532 HKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKSSYR 573
            K+   ++ ++P+ TT S+++ L + + KY E   +    YR
Sbjct: 774 SKID--KKGILPEATTTSLLIYLFSVNGKYREYIKLLPEKYR 813



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 143/502 (28%), Positives = 258/502 (51%), Gaps = 16/502 (3%)

Query: 63  FGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGN 122
           FG +      P + S+N L    +K    D     + K+   G++P+ +T + LIN    
Sbjct: 212 FGRLLRTGLGPDVFSYNALIDGFSKEGEVDKAHDLFYKMEEQGIMPNVVTYSSLIN---- 267

Query: 123 KERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGD 182
              GLC    + +A  + + M+  GVRP+ +TY  LI+G+  +G    ++R+ K+M S  
Sbjct: 268 ---GLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHGYSTSGMWKESVRVFKEMSSS- 323

Query: 183 YENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAG 242
                +   ++ + +  + +LCK G + +A+++F  M  +G  P V+    L+HG+  AG
Sbjct: 324 -----LLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPDVISYGALLHGYATAG 378

Query: 243 NWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYN 302
               ++ LF  M+  G  P+   FN +I+   + G ++++  + E M ++G+NPD  T++
Sbjct: 379 CIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFS 438

Query: 303 SLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISN 362
           +++  +C +GR+D A E F  M   G       Y+ LI G C   ++ +A  L   ++S 
Sbjct: 439 TVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSK 498

Query: 363 GVRQTVIT-YNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQE 421
           G+    I  + ++++ L + G+    + + D +      P+L T+N L+DG C    ++E
Sbjct: 499 GIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKE 558

Query: 422 AVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIH 481
           AV L   +E    E  I  +N L+DG CK GR+D+A  LF  +  K +  T V+Y+I++H
Sbjct: 559 AVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILH 618

Query: 482 GLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNL 541
           GL +  +   A +    M ++G A ++ T+ T++ G  +NN T +   LL K+     N+
Sbjct: 619 GLFQARRTIVAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLF--SMNV 676

Query: 542 VPDDTTFSIVVDLLAKDEKYHE 563
             D  TF+IV+  + K  +  E
Sbjct: 677 KFDILTFNIVIRAMFKVGRRQE 698



 Score =  218 bits (555), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 143/515 (27%), Positives = 247/515 (47%), Gaps = 31/515 (6%)

Query: 35  SSPETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSP-PISSFNLLFGAVAKNRHYDA 93
           + P    +    E  +SG +  ++AR+ F  +   + +P P    N L  A+A+     A
Sbjct: 103 ARPSPPAHAAFRERLRSGTLGPDDARHLFDELLLRRDAPAPARGLNELLSALARAPPSAA 162

Query: 94  -------VISFYRKLVSIG---LLPDFLTLNILINCFGNKER---GLCVENRIKEATWLF 140
                   +  ++++         P   T NILINC+    R   GL V          F
Sbjct: 163 CRDVPALAVELFKRMDRCACPEAAPTIYTYNILINCYRRARRPDLGLPV----------F 212

Query: 141 KNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIII 200
             ++  G+ PDV +Y  LI+GF + G +  A  L  KM     E G++   N+ +YS +I
Sbjct: 213 GRLLRTGLGPDVFSYNALIDGFSKEGEVDKAHDLFYKM----EEQGIMP--NVVTYSSLI 266

Query: 201 DSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPR 260
           + LCK   +DKA+ +  +M G G+ P  +    LIHG+  +G W+E   +F EM      
Sbjct: 267 NGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHGYSTSGMWKESVRVFKEMSSSLLV 326

Query: 261 PNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREI 320
           P++   N  +  LCK G+I EA  + + M+ +G  PD  +Y +L+ GY   G I     +
Sbjct: 327 PDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNL 386

Query: 321 FLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQ 380
           F  M  +G       +N LIN Y ++  +++++ ++  +   GV   +IT++T++S   +
Sbjct: 387 FNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCR 446

Query: 381 AGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLF-HMLEMNKFEFGIE 439
            G+   A + F+ M    V PD + Y+ LI G C    + +A +L   ML        I+
Sbjct: 447 LGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIK 506

Query: 440 IFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYM 499
            F  +I+ LCK GR+    ++   +   G  P ++T++ ++ G C  G +++A   L  M
Sbjct: 507 FFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSM 566

Query: 500 EKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKM 534
           E  G  P++ T+NTL+ G+ ++ +    + L   M
Sbjct: 567 ESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDM 601



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 103/401 (25%), Positives = 180/401 (44%), Gaps = 38/401 (9%)

Query: 189 SKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVN 248
           +   I++Y+I+I+   +    D    +F  +   G+ P V     LI GF   G  ++ +
Sbjct: 185 AAPTIYTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNALIDGFSKEGEVDKAH 244

Query: 249 GLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGY 308
            LF +M + G  PN++T++ +I+ LCK  ++++A  +L  M+  G+ P+  TYN L+ GY
Sbjct: 245 DLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHGY 304

Query: 309 CLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTV 368
              G    +  +F  M S      V + N  +   CK   ++EA  ++  ++  G +  V
Sbjct: 305 STSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPDV 364

Query: 369 ITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHM 428
           I+Y  LL G   AG       LF+ M    V PD   +N LI+   +   + +++ +F  
Sbjct: 365 ISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFED 424

Query: 429 LEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHG------ 482
           +        I  F+ +I   C+ GRLD+A E F+ +   G+ P    YS +I G      
Sbjct: 425 MTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRRD 484

Query: 483 ------------------------------LCRKGKLEKANDFLLYMEKNGCAPNVVTFN 512
                                         LC++G++ +  D +  +   G  PN++TFN
Sbjct: 485 LVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLITFN 544

Query: 513 TLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
           +L+ G+       + V LL  M      + PD  T++ +VD
Sbjct: 545 SLVDGYCLVGNMKEAVGLLDSME--SVGVEPDIYTYNTLVD 583


>gi|326510773|dbj|BAJ91734.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 711

 Score =  269 bits (688), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 151/494 (30%), Positives = 254/494 (51%), Gaps = 38/494 (7%)

Query: 71  PSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVE 130
           P   ++  +++ G     R ++     +R++   GL+PD ++ N  ++        LC  
Sbjct: 183 PPNKVTYTSMIHGYSTLGR-WEEATKMFREMTGRGLIPDIVSWNSFMD-------SLCKH 234

Query: 131 NRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKM------------ 178
            R KEA  +F +M A G RP+++TYG L++G+   G  +  +     M            
Sbjct: 235 GRSKEAAEIFYSMAAKGHRPNIVTYGILLHGYATEGCFADMMSFFNTMKGDGIVANCLVF 294

Query: 179 ---VSGDYENGLISKT--------------NIFSYSIIIDSLCKEGLVDKAKELFLEMKG 221
              +    + G++ +               ++F+YS +I +LC+ G +  A + F +M G
Sbjct: 295 TILIDAYAKRGMMDEAMLILSEMQGQGLSPDVFTYSTLISALCRMGRLADAVDKFNQMIG 354

Query: 222 RGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLG-PRPNLLTFNVMIDCLCKGGKIN 280
            G+ P  VV  +LI GFC  G+  +   L  EM++ G PRPN+  FN ++  +CK G++ 
Sbjct: 355 TGVQPNTVVYHSLIQGFCTHGDLVKAKELVYEMMNNGIPRPNIAFFNSIVHSICKEGRVM 414

Query: 281 EANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILI 340
           +A+ + +L+   G   D   +N+L+DGYCLVG +  A  +  +M S G      +YN L+
Sbjct: 415 DAHHIFDLVKDIGERSDIIMFNTLIDGYCLVGEMGKAFSVLDAMISAGIGPDTFTYNTLV 474

Query: 341 NGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVE 400
           NGY K   +++ ++L+R++    ++ T +TYN +L GLF+AG+   AQK+  EM      
Sbjct: 475 NGYFKSGRIDDGLNLFREMSDKKIKPTTVTYNIILDGLFRAGRTVAAQKMLHEMIGCGTT 534

Query: 401 PDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWEL 460
             L TYNI++ GLC+NNC  EA+ +F  L     +F I   N +I+ +    R + A +L
Sbjct: 535 VSLPTYNIILKGLCRNNCTDEAIVMFQKLCTMNVKFNITTLNTMINSMYTVQRREEAKDL 594

Query: 461 FHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQ 520
           F  +   GLVP   TY IMI  L ++G +E+A++    MEK+GCAP     N  +   L+
Sbjct: 595 FSAISDSGLVPNASTYGIMIRNLLKEGSVEEADNMFSSMEKSGCAPCSRLLNDTIRTLLE 654

Query: 521 NNKTSKVVELLHKM 534
             +  K    + K+
Sbjct: 655 KGEIVKAGNYMSKV 668



 Score =  225 bits (573), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 149/507 (29%), Positives = 257/507 (50%), Gaps = 26/507 (5%)

Query: 72  SPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVEN 131
           SP + ++N +     K        + Y +++  G +PD +T N +IN        LC   
Sbjct: 113 SPDVVTYNTVIHGFFKEGKIGKACNLYHEMMQQGFVPDVVTHNSIIN-------ALCKAR 165

Query: 132 RIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKT 191
            +  A  L + M+  GV P+ +TY ++I+G+   G    A ++ ++M       GLI   
Sbjct: 166 AVDNAELLLRQMVDNGVPPNKVTYTSMIHGYSTLGRWEEATKMFREMTG----RGLIP-- 219

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
           +I S++  +DSLCK G   +A E+F  M  +G  P +V    L+HG+   G + ++   F
Sbjct: 220 DIVSWNSFMDSLCKHGRSKEAAEIFYSMAAKGHRPNIVTYGILLHGYATEGCFADMMSFF 279

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
             M   G   N L F ++ID   K G ++EA  +L  M  +GL+PD FTY++L+   C +
Sbjct: 280 NTMKGDGIVANCLVFTILIDAYAKRGMMDEAMLILSEMQGQGLSPDVFTYSTLISALCRM 339

Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGV-RQTVIT 370
           GR+  A + F  M   G +   V Y+ LI G+C   ++ +A  L  ++++NG+ R  +  
Sbjct: 340 GRLADAVDKFNQMIGTGVQPNTVVYHSLIQGFCTHGDLVKAKELVYEMMNNGIPRPNIAF 399

Query: 371 YNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLE 430
           +N+++  + + G+   A  +FD +K      D+  +N LIDG C    V E  K F +L+
Sbjct: 400 FNSIVHSICKEGRVMDAHHIFDLVKDIGERSDIIMFNTLIDGYC---LVGEMGKAFSVLD 456

Query: 431 -MNKFEFGIEIF--NCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKG 487
            M     G + F  N L++G  K+GR+D+   LF ++  K + PT VTY+I++ GL R G
Sbjct: 457 AMISAGIGPDTFTYNTLVNGYFKSGRIDDGLNLFREMSDKKIKPTTVTYNIILDGLFRAG 516

Query: 488 KLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTT 547
           +   A   L  M   G   ++ T+N ++ G  +NN T + + +  K+     N+  + TT
Sbjct: 517 RTVAAQKMLHEMIGCGTTVSLPTYNIILKGLCRNNCTDEAIVMFQKLC--TMNVKFNITT 574

Query: 548 FSIVVDLLAKDEKYHEC----SAVSKS 570
            + +++ +   ++  E     SA+S S
Sbjct: 575 LNTMINSMYTVQRREEAKDLFSAISDS 601



 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 140/470 (29%), Positives = 244/470 (51%), Gaps = 18/470 (3%)

Query: 89  RHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIA-FG 147
           R  DAV    R++  +G +PD  +  I++       + LC +NR ++A  L + M    G
Sbjct: 58  RTDDAVKVLLRRMTELGCVPDAFSYAIVL-------KRLCDDNRSQQALDLLRMMAKEEG 110

Query: 148 V-RPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKE 206
           V  PDV+TY T+I+GF + G +  A  L+ +M+    + G +   ++ +++ II++LCK 
Sbjct: 111 VCSPDVVTYNTVIHGFFKEGKIGKACNLYHEMM----QQGFVP--DVVTHNSIINALCKA 164

Query: 207 GLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTF 266
             VD A+ L  +M   G+ P  V  T++IHG+   G WEE   +F EM   G  P+++++
Sbjct: 165 RAVDNAELLLRQMVDNGVPPNKVTYTSMIHGYSTLGRWEEATKMFREMTGRGLIPDIVSW 224

Query: 267 NVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHS 326
           N  +D LCK G+  EA  +   M  +G  P+  TY  L+ GY   G        F +M  
Sbjct: 225 NSFMDSLCKHGRSKEAAEIFYSMAAKGHRPNIVTYGILLHGYATEGCFADMMSFFNTMKG 284

Query: 327 KGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGY 386
            G     + + ILI+ Y K   ++EAM +  ++   G+   V TY+TL+S L + G+   
Sbjct: 285 DGIVANCLVFTILIDAYAKRGMMDEAMLILSEMQGQGLSPDVFTYSTLISALCRMGRLAD 344

Query: 387 AQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKL-FHMLEMNKFEFGIEIFNCLI 445
           A   F++M    V+P+   Y+ LI G C +  + +A +L + M+        I  FN ++
Sbjct: 345 AVDKFNQMIGTGVQPNTVVYHSLIQGFCTHGDLVKAKELVYEMMNNGIPRPNIAFFNSIV 404

Query: 446 DGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCA 505
             +CK GR+ +A  +F  +   G    ++ ++ +I G C  G++ KA   L  M   G  
Sbjct: 405 HSICKEGRVMDAHHIFDLVKDIGERSDIIMFNTLIDGYCLVGEMGKAFSVLDAMISAGIG 464

Query: 506 PNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLL 555
           P+  T+NTL++G+ ++ +    + L  +M+  ++ + P   T++I++D L
Sbjct: 465 PDTFTYNTLVNGYFKSGRIDDGLNLFREMS--DKKIKPTTVTYNIILDGL 512



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 122/460 (26%), Positives = 208/460 (45%), Gaps = 53/460 (11%)

Query: 69  MQPSPP-ISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGL 127
           M+ +PP I ++ ++     + R  +  ++F+ +L+  GL  D    N ++ C       L
Sbjct: 1   MRVAPPTIFTYGVVMNGCCRARRPELGLAFFGRLLRTGLKADKTAANTVLKC-------L 53

Query: 128 CVENRIKEAT-WLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENG 186
           C   R  +A   L + M   G  PD                                   
Sbjct: 54  CCTKRTDDAVKVLLRRMTELGCVPDA---------------------------------- 79

Query: 187 LISKTNIFSYSIIIDSLCKEGLVDKAKELFLEM-KGRGI-NPAVVVCTTLIHGFCCAGNW 244
                  FSY+I++  LC +    +A +L   M K  G+ +P VV   T+IHGF   G  
Sbjct: 80  -------FSYAIVLKRLCDDNRSQQALDLLRMMAKEEGVCSPDVVTYNTVIHGFFKEGKI 132

Query: 245 EEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSL 304
            +   L+ EM+  G  P+++T N +I+ LCK   ++ A  LL  M+  G+ P++ TY S+
Sbjct: 133 GKACNLYHEMMQQGFVPDVVTHNSIINALCKARAVDNAELLLRQMVDNGVPPNKVTYTSM 192

Query: 305 MDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGV 364
           + GY  +GR + A ++F  M  +G    +VS+N  ++  CK    +EA  ++  + + G 
Sbjct: 193 IHGYSTLGRWEEATKMFREMTGRGLIPDIVSWNSFMDSLCKHGRSKEAAEIFYSMAAKGH 252

Query: 365 RQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVK 424
           R  ++TY  LL G    G        F+ MK   +  +   + ILID   K   + EA+ 
Sbjct: 253 RPNIVTYGILLHGYATEGCFADMMSFFNTMKGDGIVANCLVFTILIDAYAKRGMMDEAML 312

Query: 425 LFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLC 484
           +   ++       +  ++ LI  LC+ GRL +A + F+++   G+ P  V Y  +I G C
Sbjct: 313 ILSEMQGQGLSPDVFTYSTLISALCRMGRLADAVDKFNQMIGTGVQPNTVVYHSLIQGFC 372

Query: 485 RKGKLEKANDFLLYMEKNGCA-PNVVTFNTLMHGFLQNNK 523
             G L KA + +  M  NG   PN+  FN+++H   +  +
Sbjct: 373 THGDLVKAKELVYEMMNNGIPRPNIAFFNSIVHSICKEGR 412



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 106/388 (27%), Positives = 181/388 (46%), Gaps = 9/388 (2%)

Query: 150 PDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLV 209
           P + TYG ++NG CR     + L    +++      GL  K +  + + ++  LC     
Sbjct: 6   PTIFTYGVVMNGCCRARRPELGLAFFGRLL----RTGL--KADKTAANTVLKCLCCTKRT 59

Query: 210 DKA-KELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGP--RPNLLTF 266
           D A K L   M   G  P       ++   C     ++   L   M        P+++T+
Sbjct: 60  DDAVKVLLRRMTELGCVPDAFSYAIVLKRLCDDNRSQQALDLLRMMAKEEGVCSPDVVTY 119

Query: 267 NVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHS 326
           N +I    K GKI +A  L   M+Q+G  PD  T+NS+++  C    +D A  +   M  
Sbjct: 120 NTVIHGFFKEGKIGKACNLYHEMMQQGFVPDVVTHNSIINALCKARAVDNAELLLRQMVD 179

Query: 327 KGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGY 386
            G     V+Y  +I+GY  +   EEA  ++R++   G+   ++++N+ +  L + G++  
Sbjct: 180 NGVPPNKVTYTSMIHGYSTLGRWEEATKMFREMTGRGLIPDIVSWNSFMDSLCKHGRSKE 239

Query: 387 AQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLID 446
           A ++F  M      P++ TY IL+ G     C  + +  F+ ++ +       +F  LID
Sbjct: 240 AAEIFYSMAAKGHRPNIVTYGILLHGYATEGCFADMMSFFNTMKGDGIVANCLVFTILID 299

Query: 447 GLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAP 506
              K G +D A  +  ++  +GL P V TYS +I  LCR G+L  A D    M   G  P
Sbjct: 300 AYAKRGMMDEAMLILSEMQGQGLSPDVFTYSTLISALCRMGRLADAVDKFNQMIGTGVQP 359

Query: 507 NVVTFNTLMHGFLQNNKTSKVVELLHKM 534
           N V +++L+ GF  +    K  EL+++M
Sbjct: 360 NTVVYHSLIQGFCTHGDLVKAKELVYEM 387



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 71/293 (24%), Positives = 126/293 (43%), Gaps = 36/293 (12%)

Query: 261 PNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREI 320
           P + T+ V+++  C+  +          +++ GL  D+   N+++   C   R D A ++
Sbjct: 6   PTIFTYGVVMNGCCRARRPELGLAFFGRLLRTGLKADKTAANTVLKCLCCTKRTDDAVKV 65

Query: 321 FLS-MHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLF 379
            L  M   GC     SY I++   C     ++A+ L R +                    
Sbjct: 66  LLRRMTELGCVPDAFSYAIVLKRLCDDNRSQQALDLLRMM-------------------- 105

Query: 380 QAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIE 439
            A + G               PD+ TYN +I G  K   + +A  L+H +    F   + 
Sbjct: 106 -AKEEGVCS------------PDVVTYNTVIHGFFKEGKIGKACNLYHEMMQQGFVPDVV 152

Query: 440 IFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYM 499
             N +I+ LCKA  +DNA  L  ++   G+ P  VTY+ MIHG    G+ E+A      M
Sbjct: 153 THNSIINALCKARAVDNAELLLRQMVDNGVPPNKVTYTSMIHGYSTLGRWEEATKMFREM 212

Query: 500 EKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVV 552
              G  P++V++N+ M    ++ ++ +  E+ + MA       P+  T+ I++
Sbjct: 213 TGRGLIPDIVSWNSFMDSLCKHGRSKEAAEIFYSMAAKGHR--PNIVTYGILL 263



 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 33/134 (24%), Positives = 63/134 (47%), Gaps = 8/134 (5%)

Query: 438 IEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLL 497
           I  +  +++G C+A R +     F +L + GL       + ++  LC   + + A   LL
Sbjct: 8   IFTYGVVMNGCCRARRPELGLAFFGRLLRTGLKADKTAANTVLKCLCCTKRTDDAVKVLL 67

Query: 498 Y-MEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLA 556
             M + GC P+  ++  ++     +N++ + ++LL  MA+ E    PD  T++ V+    
Sbjct: 68  RRMTELGCVPDAFSYAIVLKRLCDDNRSQQALDLLRMMAKEEGVCSPDVVTYNTVIHGFF 127

Query: 557 KDEK-------YHE 563
           K+ K       YHE
Sbjct: 128 KEGKIGKACNLYHE 141


>gi|242065464|ref|XP_002454021.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
 gi|241933852|gb|EES06997.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
          Length = 729

 Score =  268 bits (686), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 154/492 (31%), Positives = 253/492 (51%), Gaps = 27/492 (5%)

Query: 82  FGAVAKNRHYDAVISFY---------RKLVS-IGLLPDFLTLNILINCFGNKERGLCVEN 131
            GA A    Y+ +++ Y         R+L+S +   PD  T N LI       R LCV  
Sbjct: 124 LGASATVVTYNTMVNGYCRAGRIEDARRLISGMPFPPDTFTFNPLI-------RALCVRG 176

Query: 132 RIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKT 191
           R+ +A  +F +M+  G  P V+TY  L++  C+      A+ L  +M +   E       
Sbjct: 177 RVPDALAVFDDMLHRGCSPSVVTYSILLDATCKASGYRQAMVLLDEMRAKGCE------P 230

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
           +I +Y+++I+++C EG VD+A  +  ++   G  P  V  T ++   C +  W+EV  LF
Sbjct: 231 DIVTYNVLINAMCNEGDVDEALNILSDLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELF 290

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
            EM      P+ +TFN ++  LC+ G ++ A  +++ M + G  PD  TY+S++DG C V
Sbjct: 291 AEMASNKCAPDEVTFNTIVTSLCQQGLVDRAIKVVDHMSEHGCIPDIVTYSSILDGLCDV 350

Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
           GR+D A E+   + S GCK   ++Y  ++ G C I   E A  L  +++ +      +T+
Sbjct: 351 GRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCPPDEVTF 410

Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
           NT+++ L Q G    A K+ ++M      PD+ TYN +IDGLC   C+ +A++L   L+ 
Sbjct: 411 NTVIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAMELLSNLQS 470

Query: 432 NKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEK 491
              +  I  FN L+ GLC   R ++A +L   +      P   T++ +I  LC+KG L +
Sbjct: 471 YGCKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHSDCPPDATTFNTVITSLCQKGLLLQ 530

Query: 492 ANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIV 551
           A + L  M +NGC PN  T+N ++   L+  KT + ++LL  M     N  PD  T++ V
Sbjct: 531 AIETLKIMAENGCIPNQSTYNIVVDALLKAGKTQEALKLLSGMT----NGTPDLITYNTV 586

Query: 552 VDLLAKDEKYHE 563
           +  + K  K  E
Sbjct: 587 ISNITKAGKMEE 598



 Score =  256 bits (654), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 161/549 (29%), Positives = 262/549 (47%), Gaps = 41/549 (7%)

Query: 37  PET-QLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVI 95
           P+T   N  +   C  G   + +A   F  M H   SP + ++++L  A  K   Y   +
Sbjct: 160 PDTFTFNPLIRALCVRG--RVPDALAVFDDMLHRGCSPSVVTYSILLDATCKASGYRQAM 217

Query: 96  SFYRKLVSIGLLPDFLTLNILINCFGNKE----------------------------RGL 127
               ++ + G  PD +T N+LIN   N+                             + L
Sbjct: 218 VLLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSDLPSHGCKPDAVTYTPVLKSL 277

Query: 128 CVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGL 187
           C   R KE   LF  M +    PD +T+ T++   C+ G +  A+++   M     E+G 
Sbjct: 278 CGSERWKEVEELFAEMASNKCAPDEVTFNTIVTSLCQQGLVDRAIKVVDHM----SEHGC 333

Query: 188 ISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEV 247
           I   +I +YS I+D LC  G VD A EL   +K  G  P  +  TT++ G C    WE  
Sbjct: 334 IP--DIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSIEQWEHA 391

Query: 248 NGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDG 307
             L  EM+     P+ +TFN +I  LC+ G ++ A  ++E M + G NPD  TYNS++DG
Sbjct: 392 EELMAEMVCSDCPPDEVTFNTVIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDG 451

Query: 308 YCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQT 367
            C    ID A E+  ++ S GCK  +V++N L+ G C +   E+A  L   ++ +     
Sbjct: 452 LCNERCIDDAMELLSNLQSYGCKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHSDCPPD 511

Query: 368 VITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFH 427
             T+NT+++ L Q G    A +    M      P+ STYNI++D L K    QEA+KL  
Sbjct: 512 ATTFNTVITSLCQKGLLLQAIETLKIMAENGCIPNQSTYNIVVDALLKAGKTQEALKLLS 571

Query: 428 MLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKG 487
              M      +  +N +I  + KAG+++ A +L   +   GL P  +TY  + +G+CR+ 
Sbjct: 572 --GMTNGTPDLITYNTVISNITKAGKMEEALDLLRVMVSNGLSPDTITYRSLAYGICRED 629

Query: 488 KLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTT 547
             ++A   L  ++  G +P+   +N ++ GF QN +T   ++    M       +PD++T
Sbjct: 630 GTDRAIRMLCRLQDMGLSPDATFYNDILLGFCQNWRTDIAIDCFAHMV--SSGCMPDEST 687

Query: 548 FSIVVDLLA 556
           + I+++ LA
Sbjct: 688 YIILLEALA 696



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 115/440 (26%), Positives = 205/440 (46%), Gaps = 15/440 (3%)

Query: 58  EARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILI 117
           E    F  M   + +P   +FN +  ++ +    D  I     +   G +PD +T + ++
Sbjct: 285 EVEELFAEMASNKCAPDEVTFNTIVTSLCQQGLVDRAIKVVDHMSEHGCIPDIVTYSSIL 344

Query: 118 NCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKK 177
           +       GLC   R+ +A  L   + ++G +PD I Y T++ G C       A  L  +
Sbjct: 345 D-------GLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSIEQWEHAEELMAE 397

Query: 178 MVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHG 237
           MV  D         +  +++ +I SLC++GLVD+A ++  +M   G NP +V   ++I G
Sbjct: 398 MVCSD------CPPDEVTFNTVIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDG 451

Query: 238 FCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPD 297
            C     ++   L   +   G +P+++TFN ++  LC   +  +A  L+  M+     PD
Sbjct: 452 LCNERCIDDAMELLSNLQSYGCKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHSDCPPD 511

Query: 298 RFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYR 357
             T+N+++   C  G +  A E    M   GC     +YNI+++   K    +EA+ L  
Sbjct: 512 ATTFNTVITSLCQKGLLLQAIETLKIMAENGCIPNQSTYNIVVDALLKAGKTQEALKLLS 571

Query: 358 QIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNN 417
            + +NG    +ITYNT++S + +AG+   A  L   M    + PD  TY  L  G+C+ +
Sbjct: 572 GM-TNGTPD-LITYNTVISNITKAGKMEEALDLLRVMVSNGLSPDTITYRSLAYGICRED 629

Query: 418 CVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYS 477
               A+++   L+          +N ++ G C+  R D A + F  +   G +P   TY 
Sbjct: 630 GTDRAIRMLCRLQDMGLSPDATFYNDILLGFCQNWRTDIAIDCFAHMVSSGCMPDESTYI 689

Query: 478 IMIHGLCRKGKLEKANDFLL 497
           I++  L  +  L++A   L+
Sbjct: 690 ILLEALAYECLLDEAKQLLV 709



 Score =  151 bits (382), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 87/328 (26%), Positives = 158/328 (48%), Gaps = 32/328 (9%)

Query: 259 PRPNLLTFNVMIDCLCKGGKINEAN-------------------------GLLE----LM 289
           P P ++  N++I  LC GG++ +A                          G +E    L+
Sbjct: 95  PLP-VVPCNILIKRLCSGGRVADAERVFATLGASATVVTYNTMVNGYCRAGRIEDARRLI 153

Query: 290 IQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNV 349
                 PD FT+N L+   C+ GR+  A  +F  M  +GC  +VV+Y+IL++  CK    
Sbjct: 154 SGMPFPPDTFTFNPLIRALCVRGRVPDALAVFDDMLHRGCSPSVVTYSILLDATCKASGY 213

Query: 350 EEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNIL 409
            +AM L  ++ + G    ++TYN L++ +   G    A  +  ++  +  +PD  TY  +
Sbjct: 214 RQAMVLLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSDLPSHGCKPDAVTYTPV 273

Query: 410 IDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGL 469
           +  LC +   +E  +LF  +  NK       FN ++  LC+ G +D A ++   + + G 
Sbjct: 274 LKSLCGSERWKEVEELFAEMASNKCAPDEVTFNTIVTSLCQQGLVDRAIKVVDHMSEHGC 333

Query: 470 VPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVE 529
           +P +VTYS ++ GLC  G+++ A + L  ++  GC P+ + + T++ G     +     E
Sbjct: 334 IPDIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSIEQWEHAEE 393

Query: 530 LLHKMAEPERNLVPDDTTFSIVVDLLAK 557
           L+ +M     +  PD+ TF+ V+  L +
Sbjct: 394 LMAEMV--CSDCPPDEVTFNTVIASLCQ 419



 Score = 60.1 bits (144), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 38/122 (31%), Positives = 56/122 (45%), Gaps = 8/122 (6%)

Query: 442 NCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEK 501
           N LI  LC  GR+ +A  +F  L   G   TVVTY+ M++G CR G++E A   +  M  
Sbjct: 102 NILIKRLCSGGRVADAERVFATL---GASATVVTYNTMVNGYCRAGRIEDARRLISGMPF 158

Query: 502 NGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKY 561
               P+  TFN L+       +    + +   M    R   P   T+SI++D   K   Y
Sbjct: 159 ---PPDTFTFNPLIRALCVRGRVPDALAVFDDML--HRGCSPSVVTYSILLDATCKASGY 213

Query: 562 HE 563
            +
Sbjct: 214 RQ 215


>gi|357499275|ref|XP_003619926.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494941|gb|AES76144.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 727

 Score =  268 bits (685), Expect = 6e-69,   Method: Compositional matrix adjust.
 Identities = 157/476 (32%), Positives = 251/476 (52%), Gaps = 11/476 (2%)

Query: 90  HYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVR 149
           H     S + K++  G   D + LN ++       +GLCV   + +A      ++  G  
Sbjct: 87  HVSFSFSIFGKILKRGYGLDTVALNTVL-------KGLCVNGGVLKALEFHDEIVNNGFS 139

Query: 150 PDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYE--NGLISKTNIFSYSIIIDSLCKEG 207
            + ++YG LING C  G ++ A+ L + +     +  +G   K N+  YSI+ID LC+ G
Sbjct: 140 LNEVSYGILINGLCENGRVNEAVNLLRMIEKEKEKEKDGFFVKGNVVMYSIVIDCLCRNG 199

Query: 208 LVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFN 267
            VD+  E + EM G G+ P      +LI G C  G + E  GL  EM+  G   ++  F 
Sbjct: 200 FVDEGFEFYNEMMGNGVCPNEFTYGSLIRGLCGVGKFLEGFGLVDEMIRRGLDVSVYVFT 259

Query: 268 VMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSK 327
           V+ID LCK G + EA  + + M+ RG  P+  T  +LM GYCL G +D ARE+F ++   
Sbjct: 260 VLIDGLCKNGMLVEAREMFDEMVNRGYEPNIVTCTALMGGYCLKGNVDMARELFDAIGEW 319

Query: 328 GCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYA 387
           G K  V +YN+ I+GYCK+  V +A+ ++ ++   GV   ++TYN+L+  L +AG+   A
Sbjct: 320 GFKRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGEVSGA 379

Query: 388 QKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDG 447
            ++   M    + PD+ T  IL+DGLCK+  + +A+ LF+ L  +     +  +  LI G
Sbjct: 380 WEIVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVESGLTPDVWSYTILIHG 439

Query: 448 LCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPN 507
            C + R+  A  L   +  K LVP +VTYS +I GLCR G++  A   L  M   G  P+
Sbjct: 440 CCTSRRMGEAMNLLRDMHLKNLVPHIVTYSCLIDGLCRSGRISNAWRLLNEMHVKGPLPD 499

Query: 508 VVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
            +T++ L+    +     + V L ++M   +R L PD   ++I++D   K E+  E
Sbjct: 500 TITYSILLDALWKKQHLDEAVFLFNQMI--KRGLEPDVMCYTIMIDGYCKSERIDE 553



 Score =  218 bits (555), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 135/410 (32%), Positives = 212/410 (51%), Gaps = 13/410 (3%)

Query: 78  FNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEAT 137
           ++++   + +N   D    FY +++  G+ P+  T   LI       RGLC   +  E  
Sbjct: 188 YSIVIDCLCRNGFVDEGFEFYNEMMGNGVCPNEFTYGSLI-------RGLCGVGKFLEGF 240

Query: 138 WLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYS 197
            L   MI  G+   V  +  LI+G C+ G L  A  +  +MV+  YE       NI + +
Sbjct: 241 GLVDEMIRRGLDVSVYVFTVLIDGLCKNGMLVEAREMFDEMVNRGYE------PNIVTCT 294

Query: 198 IIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDL 257
            ++   C +G VD A+ELF  +   G    V      IHG+C  G   +   +F EM   
Sbjct: 295 ALMGGYCLKGNVDMARELFDAIGEWGFKRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCRE 354

Query: 258 GPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTA 317
           G  PN++T+N +IDCLCK G+++ A  +++ M + GL PD  T   L+DG C   R+D A
Sbjct: 355 GVVPNIVTYNSLIDCLCKAGEVSGAWEIVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQA 414

Query: 318 REIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSG 377
             +F  +   G    V SY ILI+G C    + EAM+L R +    +   ++TY+ L+ G
Sbjct: 415 ILLFNQLVESGLTPDVWSYTILIHGCCTSRRMGEAMNLLRDMHLKNLVPHIVTYSCLIDG 474

Query: 378 LFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFG 437
           L ++G+   A +L +EM +    PD  TY+IL+D L K   + EAV LF+ +     E  
Sbjct: 475 LCRSGRISNAWRLLNEMHVKGPLPDTITYSILLDALWKKQHLDEAVFLFNQMIKRGLEPD 534

Query: 438 IEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKG 487
           +  +  +IDG CK+ R+D A  LF ++  K LVP +VTY+I+ + + + G
Sbjct: 535 VMCYTIMIDGYCKSERIDEAINLFREMHMKNLVPDIVTYTILFNAVFKSG 584



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 111/368 (30%), Positives = 184/368 (50%), Gaps = 18/368 (4%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CK+G+  L EAR  F  M +    P I +   L G      + D     +  +   G   
Sbjct: 266 CKNGM--LVEAREMFDEMVNRGYEPNIVTCTALMGGYCLKGNVDMARELFDAIGEWGFKR 323

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           D  T N+ I+       G C   R+++A  +F  M   GV P+++TY +LI+  C+ G +
Sbjct: 324 DVWTYNVFIH-------GYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGEV 376

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
           S A  + K M    + +GL    +I +  I++D LCK   +D+A  LF ++   G+ P V
Sbjct: 377 SGAWEIVKTM----HRSGLTP--DIVTCCILLDGLCKSKRLDQAILLFNQLVESGLTPDV 430

Query: 229 VVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLEL 288
              T LIHG C +    E   L  +M      P+++T++ +ID LC+ G+I+ A  LL  
Sbjct: 431 WSYTILIHGCCTSRRMGEAMNLLRDMHLKNLVPHIVTYSCLIDGLCRSGRISNAWRLLNE 490

Query: 289 MIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILN 348
           M  +G  PD  TY+ L+D       +D A  +F  M  +G +  V+ Y I+I+GYCK   
Sbjct: 491 MHVKGPLPDTITYSILLDALWKKQHLDEAVFLFNQMIKRGLEPDVMCYTIMIDGYCKSER 550

Query: 349 VEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNI 408
           ++EA++L+R++    +   ++TY  L + +F++G   Y  K  + ++  N  P +  Y  
Sbjct: 551 IDEAINLFREMHMKNLVPDIVTYTILFNAVFKSGSNSYEWKFVNVIRDINPPPRVLKY-- 608

Query: 409 LIDGLCKN 416
            +  LCK+
Sbjct: 609 -LAALCKS 615


>gi|224713522|gb|ACN62068.1| PPR-814b [Zea mays]
          Length = 814

 Score =  268 bits (685), Expect = 7e-69,   Method: Compositional matrix adjust.
 Identities = 168/542 (30%), Positives = 278/542 (51%), Gaps = 42/542 (7%)

Query: 45  LHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSI 104
           +H  CK+  ++  EA  F   M +    P   ++N L    +    +   +  ++++   
Sbjct: 261 VHALCKARAMDKAEA--FLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRH 318

Query: 105 GLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCR 164
            +LPD +TL++L+         LC   +IKEA  +F  M   G  P+V +Y  ++NG+  
Sbjct: 319 SILPDVVTLSMLMG-------SLCKYGKIKEARDVFDTMAMKGQNPNVFSYTIMLNGYAT 371

Query: 165 TGNLSVALRLHKKMVSGD---------------YEN-GLISKT--------------NIF 194
            G L     L   M+ GD               Y N G++ K               ++ 
Sbjct: 372 KGCLVDMTDLFDLML-GDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVV 430

Query: 195 SYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEM 254
           +Y  +I +LC+ G +D A E F +M  +G+ P       LI GFC  G+  +   L  E+
Sbjct: 431 TYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEI 490

Query: 255 LDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRI 314
           ++ G   +++ F+ +I+ LCK G++ +A  + +L +  GL+P    Y+ LMDGYCLVG++
Sbjct: 491 MNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKM 550

Query: 315 DTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTL 374
           + A  +F +M S G +   V Y  L+NGYCKI  ++E +SL+R+++  G++ + I YN +
Sbjct: 551 EKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNII 610

Query: 375 LSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKF 434
           + GLF+AG+   A+  F EM    +  +  TYNI++ GL KN C  EA+ LF  L     
Sbjct: 611 IDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYNIVLRGLFKNRCFDEAIFLFKELRAMNV 670

Query: 435 EFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKAND 494
           +  I   N +I G+ +  R++ A +LF  + + GLVP VVTYSIMI  L ++G +E+A D
Sbjct: 671 KINIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAED 730

Query: 495 FLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDL 554
               M+  GC P+    N ++   L+ N+  +    L K+   ERN   +  T  ++VDL
Sbjct: 731 MFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKI--DERNFSLEHLTTMLLVDL 788

Query: 555 LA 556
            +
Sbjct: 789 FS 790



 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 160/572 (27%), Positives = 286/572 (50%), Gaps = 36/572 (6%)

Query: 20  KLSSLFKSPRQIAAVSSPETQLNEFLHENCKSGIINLNEARYFFGYM--THMQPSPPISS 77
           + +S  + PR    V SP +     L + C         A  FFG +  T ++ +  I++
Sbjct: 96  RAASRAQGPR----VLSPTSHTYAILMDCCTRAH-RPELALAFFGQLLRTGLRVNIIIAN 150

Query: 78  FNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEAT 137
            +LL G     R  +A+     +   +G +PD  + +IL+       + LC + +  +A 
Sbjct: 151 -HLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILL-------KSLCDQGKSGQAD 202

Query: 138 WLFKNMIAFGV--RPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFS 195
            L + M   G    PDV+ Y T+I+GF + G+++ A  L K+MV    + G+    +  +
Sbjct: 203 DLLRMMAEGGAVCSPDVVAYSTVIDGFFKEGDVNKACDLFKEMV----QRGI--PPDFVT 256

Query: 196 YSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEML 255
           YS ++ +LCK   +DKA+    +M  +G+ P       LI+G+   G W+E   +F EM 
Sbjct: 257 YSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMR 316

Query: 256 DLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRID 315
                P+++T ++++  LCK GKI EA  + + M  +G NP+ F+Y  +++GY   G + 
Sbjct: 317 RHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPNVFSYTIMLNGYATKGCLV 376

Query: 316 TAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLL 375
              ++F  M   G    + ++N+LI  Y     +++AM ++ ++  +GV+  V+TY T++
Sbjct: 377 DMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVI 436

Query: 376 SGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFE 435
           + L + G+   A + F++M    V PD   Y+ LI G C +  + +A +L   +  N   
Sbjct: 437 AALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMH 496

Query: 436 FGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDF 495
             I  F+ +I+ LCK GR+ +A  +F      GL PT V YS+++ G C  GK+EKA   
Sbjct: 497 LDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRV 556

Query: 496 LLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLL 555
              M   G  PN V + TL++G+ +  +  + + L  +M   ++ + P    ++I++D L
Sbjct: 557 FDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREML--QKGIKPSTILYNIIIDGL 614

Query: 556 -------AKDEKYHECS----AVSKSSYRACL 576
                      K+HE +    A++K +Y   L
Sbjct: 615 FEAGRTVPAKVKFHEMTESGIAMNKCTYNIVL 646



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 122/425 (28%), Positives = 206/425 (48%), Gaps = 13/425 (3%)

Query: 72  SPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVEN 131
           +P I +FN+L  A A     D  +  + ++   G+ PD +T   +I         LC   
Sbjct: 391 APDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIA-------ALCRIG 443

Query: 132 RIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKT 191
           ++ +A   F  MI  GV PD   Y  LI GFC  G+L  A    K+++S    NG+    
Sbjct: 444 KMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKA----KELISEIMNNGM--HL 497

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
           +I  +S II++LCK G V  A+ +F      G++P  VV + L+ G+C  G  E+   +F
Sbjct: 498 DIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVF 557

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
             M+  G  PN + +  +++  CK G+I+E   L   M+Q+G+ P    YN ++DG    
Sbjct: 558 DAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEA 617

Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
           GR   A+  F  M   G      +YNI++ G  K    +EA+ L++++ +  V+  +IT 
Sbjct: 618 GRTVPAKVKFHEMTESGIAMNKCTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITL 677

Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
           NT+++G+FQ  +   A+ LF  +    + P + TY+I+I  L K   V+EA  +F  ++ 
Sbjct: 678 NTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQN 737

Query: 432 NKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEK 491
              E    + N ++  L K   +  A     K+ ++      +T  +++     KG   +
Sbjct: 738 AGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTTMLLVDLFSSKGTCRE 797

Query: 492 ANDFL 496
              FL
Sbjct: 798 HIRFL 802


>gi|302770783|ref|XP_002968810.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
 gi|300163315|gb|EFJ29926.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
          Length = 545

 Score =  268 bits (684), Expect = 8e-69,   Method: Compositional matrix adjust.
 Identities = 165/541 (30%), Positives = 266/541 (49%), Gaps = 57/541 (10%)

Query: 69  MQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLC 128
           M  SP + +F ++   + + +  D   S   + V  G  PD++T N+ I+       GLC
Sbjct: 1   MPCSPDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFID-------GLC 53

Query: 129 VENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLI 188
              R+ +A  L K M      P  +TY  L++G  + G L  A+ + ++MV    E G  
Sbjct: 54  KAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMV----EKG-- 107

Query: 189 SKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVN 248
           +   + +Y+++ID L K G V++A+ +F++M G G  P   V T LI G C +G  EE  
Sbjct: 108 NSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAY 167

Query: 249 GLFIEM----LDLGPRPNLLTFNVMIDCLCKGGKINEANGLLE-LMIQRGLNPDRFTYNS 303
            L+ E           P+++T+  +ID LCK G+I EA  + +   ++RG  PD  TY S
Sbjct: 168 ALYKEANARKHHATAVPDVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTS 227

Query: 304 LMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNG 363
           ++DG C +GR++   E F  M ++G +   V+Y  LI+G+ K   + +A  +YRQ++ +G
Sbjct: 228 IIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSG 287

Query: 364 VRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAV 423
              + +TYN +L GL +AG+   A   F  M+       + TY+ L+DG C    V  AV
Sbjct: 288 TVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAV 347

Query: 424 KLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVT-------- 475
           +LF  +     E  +  +N +I GLC+AG+L  A+  F KL Q+ L P V T        
Sbjct: 348 ELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNAFLHGL 407

Query: 476 ----------------------------YSIMIHGLCRKGKLEKANDFLLYMEKNGCAPN 507
                                       YSI++ G+CR G LE A +    M   G AP+
Sbjct: 408 CQRLDTVSDGVELFESMVSQGTSPNLHSYSILMDGICRAGGLEVALEIFREMVSRGVAPD 467

Query: 508 VVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAV 567
           VV FNTL+       +  + +E+  ++   ER   PD  ++  ++D L++ E+  E   +
Sbjct: 468 VVVFNTLIRWLCIAGRVDEALEVFREL---ERRSAPDAWSYWSLLDGLSRCERMEEARLL 524

Query: 568 S 568
           S
Sbjct: 525 S 525



 Score =  232 bits (591), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 146/517 (28%), Positives = 248/517 (47%), Gaps = 50/517 (9%)

Query: 29  RQIAAVSSPE-TQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAK 87
           R + A   P+    N F+   CK+    +++A      M   +  P   ++  L   + K
Sbjct: 32  RAVRAGCEPDYVTYNVFIDGLCKAE--RVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLK 89

Query: 88  NRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFG 147
               D  ++   ++V  G  P   T  ++I+       GL    R++EA  +F +M+  G
Sbjct: 90  AGRLDEAMAVLEQMVEKGNSPTLKTYTVVID-------GLSKAGRVEEARRIFVDMLGNG 142

Query: 148 VRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEG 207
            RPD   Y  LI G C++G    A  L+K+  +  +    +   ++ +Y+ +ID LCK G
Sbjct: 143 CRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATAVP--DVVTYTSLIDGLCKAG 200

Query: 208 LVDKAKELFL-EMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTF 266
            + +A+++F  E   RG  P  V  T++I G C  G  EE    F EM + G  P+ +T+
Sbjct: 201 RILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTY 260

Query: 267 NVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHS 326
             +ID   K   I +A+ +   M+Q G      TYN ++DG C  GR+  A   FL+M  
Sbjct: 261 AALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEE 320

Query: 327 KGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGY 386
           +GC  TVV+Y+ L++G+C   NV  A+ L+R+++  G    +++YN ++ GL +AG+   
Sbjct: 321 RGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAK 380

Query: 387 AQ------------------------------------KLFDEMKLYNVEPDLSTYNILI 410
           A                                     +LF+ M      P+L +Y+IL+
Sbjct: 381 AYFYFEKLLQRRLCPDVYTFNAFLHGLCQRLDTVSDGVELFESMVSQGTSPNLHSYSILM 440

Query: 411 DGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLV 470
           DG+C+   ++ A+++F  +        + +FN LI  LC AGR+D A E+F +L ++   
Sbjct: 441 DGICRAGGLEVALEIFREMVSRGVAPDVVVFNTLIRWLCIAGRVDEALEVFRELERRS-A 499

Query: 471 PTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPN 507
           P   +Y  ++ GL R  ++E+A     +M+  GCAP 
Sbjct: 500 PDAWSYWSLLDGLSRCERMEEARLLSFHMKLQGCAPR 536


>gi|302806475|ref|XP_002984987.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
 gi|300147197|gb|EFJ13862.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
          Length = 471

 Score =  267 bits (683), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 148/472 (31%), Positives = 248/472 (52%), Gaps = 17/472 (3%)

Query: 93  AVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDV 152
           A +    ++ S G  PD  T   +I    N            +      ++ + G  P+V
Sbjct: 8   AALELLEEMKSAGFAPDAFTHTPIITAMANA----------GDLDGAMDHLRSMGCDPNV 57

Query: 153 ITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKA 212
           +TY  LI  F R   L  A++L ++M     E G     N+ +Y++++D+LCK  +V  A
Sbjct: 58  VTYTALIAAFARAKKLEEAMKLLEEM----RERG--CPPNLVTYNVLVDALCKLSMVGAA 111

Query: 213 KELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDC 272
           +++  +M   G  P V+   +L+ GFC  GN ++   L   M+  G RPN++T++ +ID 
Sbjct: 112 QDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDG 171

Query: 273 LCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHT 332
           LCK  K  EA  +LE M   G+ PD FTY++L+ G C   +I+ A ++   M   GC   
Sbjct: 172 LCKSQKFLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPD 231

Query: 333 VVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFD 392
           VV Y+ +I+ +CK   + EA    +++        V+TYNT++ GL + G+   AQ + D
Sbjct: 232 VVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILD 291

Query: 393 EMKLY-NVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKA 451
           +M+   +V PD+ TY+ +I+GLCK++ + EA KL   +        +  +  +IDGLCK 
Sbjct: 292 QMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKC 351

Query: 452 GRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTF 511
           GRL+ A  L   + + G  P VVTY+ +I GLC+  K+++A   +  M   GC PN+VT+
Sbjct: 352 GRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTY 411

Query: 512 NTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
           NT+++G   + +  +  +L+ +M +      PD  T+  +V+ L   +   E
Sbjct: 412 NTMVNGLCVSGRIKEAQQLVQRMKDGRAECSPDAATYRTIVNALMSSDLVQE 463



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 123/413 (29%), Positives = 217/413 (52%), Gaps = 16/413 (3%)

Query: 55  NLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLN 114
            L EA      M      P + ++N+L  A+ K     A     +K++  G  P+ +T N
Sbjct: 72  KLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFN 131

Query: 115 ILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRL 174
            L++       G C    + +A  L   M+A G+RP+V+TY  LI+G C++     A  +
Sbjct: 132 SLVD-------GFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEV 184

Query: 175 HKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTL 234
            ++M +    +G+    + F+YS +I  LCK   +++A+++   M G G  P VVV +++
Sbjct: 185 LEEMKA----SGVTP--DAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSI 238

Query: 235 IHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRG- 293
           IH FC +G   E      EM      P+++T+N +ID LCK GKI EA  +L+ M + G 
Sbjct: 239 IHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESGD 298

Query: 294 LNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAM 353
           + PD  TY+++++G C    +  A+++   M   GC   VV+Y  +I+G CK   +EEA 
Sbjct: 299 VLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAE 358

Query: 354 SLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGL 413
            L + +   G    V+TY TL+SGL +A +   A+++ +EM+     P+L TYN +++GL
Sbjct: 359 YLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGL 418

Query: 414 CKNNCVQEAVKLFHMLEMNKFEFGIE--IFNCLIDGLCKAGRLDNAWELFHKL 464
           C +  ++EA +L   ++  + E   +   +  +++ L  +  +  A +L  ++
Sbjct: 419 CVSGRIKEAQQLVQRMKDGRAECSPDAATYRTIVNALMSSDLVQEAEQLLEQM 471



 Score =  198 bits (503), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 119/399 (29%), Positives = 216/399 (54%), Gaps = 7/399 (1%)

Query: 204 CKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNL 263
           C  G +  A EL  EMK  G  P     T +I     AG+   ++G    +  +G  PN+
Sbjct: 1   CNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGD---LDGAMDHLRSMGCDPNV 57

Query: 264 LTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLS 323
           +T+  +I    +  K+ EA  LLE M +RG  P+  TYN L+D  C +  +  A+++   
Sbjct: 58  VTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKK 117

Query: 324 MHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQ 383
           M   G    V+++N L++G+CK  NV++A  L   +++ G+R  V+TY+ L+ GL ++ +
Sbjct: 118 MIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQK 177

Query: 384 AGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNC 443
              A+++ +EMK   V PD  TY+ LI GLCK + ++EA ++   +  +     + +++ 
Sbjct: 178 FLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSS 237

Query: 444 LIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNG 503
           +I   CK+G+L  A +   ++ ++   P VVTY+ +I GLC+ GK+ +A   L  M+++G
Sbjct: 238 IIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESG 297

Query: 504 -CAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYH 562
              P+VVT++T+++G  +++   +  +LL +M +   N  PD  T++ ++D L K  +  
Sbjct: 298 DVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCN--PDVVTYTTIIDGLCKCGRLE 355

Query: 563 ECSAVSKSSYRACLYVTIFQPSSLGSMIGCTVRLMPQPE 601
           E   + +   RA     +   ++L S + C  R + + E
Sbjct: 356 EAEYLLQGMKRAGCAPNVVTYTTLISGL-CKARKVDEAE 393


>gi|358347568|ref|XP_003637828.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503763|gb|AES84966.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 529

 Score =  267 bits (683), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 157/497 (31%), Positives = 255/497 (51%), Gaps = 58/497 (11%)

Query: 66  MTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINC------ 119
           + H  P+P I  F  + G++ K  HY  V+S +R++   GL  + +TL+ILINC      
Sbjct: 3   LHHKNPTPSIFEFGKILGSLVKANHYSIVVSLHRQMEFNGLASNLVTLSILINCYSQLGQ 62

Query: 120 ----------------------FGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGT 157
                                 F    +GLC++  I +A      ++A G + + ++YGT
Sbjct: 63  NALSFSVFANILKKGYGSDAITFTTLIKGLCLKGEIHKALHFHDKVVAQGFKLNQVSYGT 122

Query: 158 LINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFL 217
           LING C+ G    AL   +++      +G + + ++  Y+ IID LCK+ LV+ A  L+ 
Sbjct: 123 LINGLCKVGQTRAALEFLRRI------DGKLVQPDVVMYNTIIDGLCKDKLVNDAFNLYF 176

Query: 218 EMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGG 277
           EM  + I P+VV   TLI G C     ++  GL  +M+     P + TF+++ID  CK G
Sbjct: 177 EMVAKRICPSVVTYNTLICGLCIMAQLKDAIGLLHKMILEDINPTVYTFSILIDAFCKEG 236

Query: 278 KINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYN 337
           K+ EA  +  +M++  + P+  TYNSLMDG+ LV  +  A+ IF +M             
Sbjct: 237 KMKEAKNVFAVMMKEDVKPNIVTYNSLMDGHHLVNVVKKAKSIFNTM------------- 283

Query: 338 ILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLY 397
                   I  V+EAM+L+ ++    +   ++ YN+L+ GL ++G+  YA K   EM   
Sbjct: 284 --------IKMVDEAMNLFEEMHFKQIYPDMVIYNSLIDGLCKSGRTPYALKFIGEMHYR 335

Query: 398 NVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNA 457
              PD+ TYN L+D LCKN  V +A++L   L+    +  +  +N LI+GLCK+GRL +A
Sbjct: 336 GQPPDIFTYNSLLDALCKNYHVDKAIELLTKLKDQGIQPSVCTYNILINGLCKSGRLKDA 395

Query: 458 WELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHG 517
            ++F  L  KG    V TY+ MI G C+KG  ++    +  M+ +GC+P+      ++  
Sbjct: 396 EKVFEDLLVKGYNTDVYTYNAMIKGFCKKGLFDETLAMVSKMKDSGCSPDAKNCEIIIRS 455

Query: 518 FL---QNNKTSKVVELL 531
                +N+K  K  E++
Sbjct: 456 LFDKGENDKAGKFREMI 472



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 109/390 (27%), Positives = 196/390 (50%), Gaps = 16/390 (4%)

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
           +IF +  I+ SL K         L  +M+  G+   +V  + LI+ +   G       +F
Sbjct: 11  SIFEFGKILGSLVKANHYSIVVSLHRQMEFNGLASNLVTLSILINCYSQLGQNALSFSVF 70

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
             +L  G   + +TF  +I  LC  G+I++A    + ++ +G   ++ +Y +L++G C V
Sbjct: 71  ANILKKGYGSDAITFTTLIKGLCLKGEIHKALHFHDKVVAQGFKLNQVSYGTLINGLCKV 130

Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
           G+   A E    +  K  +  VV YN +I+G CK   V +A +LY ++++  +  +V+TY
Sbjct: 131 GQTRAALEFLRRIDGKLVQPDVVMYNTIIDGLCKDKLVNDAFNLYFEMVAKRICPSVVTY 190

Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
           NTL+ GL    Q   A  L  +M L ++ P + T++ILID  CK   ++EA  +F ++  
Sbjct: 191 NTLICGLCIMAQLKDAIGLLHKMILEDINPTVYTFSILIDAFCKEGKMKEAKNVFAVMMK 250

Query: 432 NKFEFGIEIFNCLIDG-----LCKAGR---------LDNAWELFHKLPQKGLVPTVVTYS 477
              +  I  +N L+DG     + K  +         +D A  LF ++  K + P +V Y+
Sbjct: 251 EDVKPNIVTYNSLMDGHHLVNVVKKAKSIFNTMIKMVDEAMNLFEEMHFKQIYPDMVIYN 310

Query: 478 IMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEP 537
            +I GLC+ G+   A  F+  M   G  P++ T+N+L+    +N    K +ELL K+   
Sbjct: 311 SLIDGLCKSGRTPYALKFIGEMHYRGQPPDIFTYNSLLDALCKNYHVDKAIELLTKLK-- 368

Query: 538 ERNLVPDDTTFSIVVDLLAKDEKYHECSAV 567
           ++ + P   T++I+++ L K  +  +   V
Sbjct: 369 DQGIQPSVCTYNILINGLCKSGRLKDAEKV 398



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 87/311 (27%), Positives = 154/311 (49%), Gaps = 12/311 (3%)

Query: 259 PRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAR 318
           P P++  F  ++  L K    +    L   M   GL  +  T + L++ Y  +G+   + 
Sbjct: 8   PTPSIFEFGKILGSLVKANHYSIVVSLHRQMEFNGLASNLVTLSILINCYSQLGQNALSF 67

Query: 319 EIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGL 378
            +F ++  KG     +++  LI G C    + +A+  + ++++ G +   ++Y TL++GL
Sbjct: 68  SVFANILKKGYGSDAITFTTLIKGLCLKGEIHKALHFHDKVVAQGFKLNQVSYGTLINGL 127

Query: 379 FQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGI 438
            + GQ   A +    +    V+PD+  YN +IDGLCK+  V +A  L+  +   +    +
Sbjct: 128 CKVGQTRAALEFLRRIDGKLVQPDVVMYNTIIDGLCKDKLVNDAFNLYFEMVAKRICPSV 187

Query: 439 EIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLY 498
             +N LI GLC   +L +A  L HK+  + + PTV T+SI+I   C++GK+++A +    
Sbjct: 188 VTYNTLICGLCIMAQLKDAIGLLHKMILEDINPTVYTFSILIDAFCKEGKMKEAKNVFAV 247

Query: 499 MEKNGCAPNVVTFNTLMHGFLQNN---KTSKVVELLHKMAEPERNLV---------PDDT 546
           M K    PN+VT+N+LM G    N   K   +   + KM +   NL          PD  
Sbjct: 248 MMKEDVKPNIVTYNSLMDGHHLVNVVKKAKSIFNTMIKMVDEAMNLFEEMHFKQIYPDMV 307

Query: 547 TFSIVVDLLAK 557
            ++ ++D L K
Sbjct: 308 IYNSLIDGLCK 318



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 66/186 (35%), Positives = 85/186 (45%), Gaps = 24/186 (12%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
           N  +   CKSG      A  F G M +    P I ++N L  A+ KN H D  I    KL
Sbjct: 310 NSLIDGLCKSG--RTPYALKFIGEMHYRGQPPDIFTYNSLLDALCKNYHVDKAIELLTKL 367

Query: 102 VSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLING 161
              G+ P   T NILIN       GLC   R+K+A  +F++++  G   DV TY  +I G
Sbjct: 368 KDQGIQPSVCTYNILIN-------GLCKSGRLKDAEKVFEDLLVKGYNTDVYTYNAMIKG 420

Query: 162 FCRTGNLSVALRLHKKM----VSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFL 217
           FC+ G     L +  KM     S D +N            III SL  +G  DKA + F 
Sbjct: 421 FCKKGLFDETLAMVSKMKDSGCSPDAKNC----------EIIIRSLFDKGENDKAGK-FR 469

Query: 218 EMKGRG 223
           EM  RG
Sbjct: 470 EMIVRG 475


>gi|302806733|ref|XP_002985098.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
 gi|300147308|gb|EFJ13973.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
          Length = 659

 Score =  267 bits (683), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 146/493 (29%), Positives = 254/493 (51%), Gaps = 21/493 (4%)

Query: 56  LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNI 115
           L+EAR     M     +P   ++N L   + K    + V     ++V  G  PD  + N 
Sbjct: 178 LDEARKLMEKMKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNT 237

Query: 116 LINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLH 175
           ++ C       LC   + +EA  + + MI     PDV+TY +L++GFC+   +  A RL 
Sbjct: 238 VVAC-------LCESGKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLL 290

Query: 176 KKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLI 235
           + MV      G      + +Y+ +I    +   +  A  +  +M   GI+P +V    L+
Sbjct: 291 EDMV------GRRCAPTVITYTTLIGGFSRADRLADAYRVMEDMFKAGISPDLVTYNCLL 344

Query: 236 HGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLN 295
            G C AG  EE + L   M++    P+++T++++++ LCK GK+++A  LLE+M++RG  
Sbjct: 345 DGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILVNGLCKLGKVDDARLLLEMMLERGCQ 404

Query: 296 PDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSL 355
           P+  T+N+++DG+C  G++D   ++   M    C   VV+Y+ LI+GYCK   +++A ++
Sbjct: 405 PNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCTPDVVTYSTLIDGYCKANRMQDAFAI 464

Query: 356 YRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCK 415
                  G+     +Y+++L GL   G+   AQ++ D M      P  S Y ++I GLC 
Sbjct: 465 L------GISPDKASYSSMLEGLCSTGKVEEAQEVMDLMTKQGCPPTSSHYALIIGGLCD 518

Query: 416 NNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVT 475
                EA+K+  ++     E  +  ++ LI+GLCK  R+++A  +   + +KG VP V T
Sbjct: 519 VERGDEALKMLQVMSERGCEPNLYTYSILINGLCKTKRVEDAINVLDVMLEKGCVPDVAT 578

Query: 476 YSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMA 535
           Y+ +I G C+  K++ A      M  +GC P+ + +N L+ GF Q+    K +E++  M 
Sbjct: 579 YTSLIDGFCKINKMDAAYQCFKTMRDSGCEPDKLAYNILISGFCQSGNVEKAIEVMQLML 638

Query: 536 EPERNLVPDDTTF 548
           E   N  PD  T+
Sbjct: 639 EKGCN--PDAATY 649



 Score =  250 bits (638), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 150/484 (30%), Positives = 239/484 (49%), Gaps = 22/484 (4%)

Query: 36  SPET-QLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAV 94
           +P+T   N  L+  CK     L E       M      P   S+N +   + ++  Y+  
Sbjct: 194 TPDTVAYNALLNGLCKQN--QLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKYEEA 251

Query: 95  ISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVIT 154
                K++     PD +T N L++       G C  +++ EA  L ++M+     P VIT
Sbjct: 252 GKILEKMIEKKCGPDVVTYNSLMD-------GFCKVSKMDEAERLLEDMVGRRCAPTVIT 304

Query: 155 YGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKE 214
           Y TLI GF R   L+ A R+ + M    ++ G+    ++ +Y+ ++D LCK G +++A E
Sbjct: 305 YTTLIGGFSRADRLADAYRVMEDM----FKAGI--SPDLVTYNCLLDGLCKAGKLEEAHE 358

Query: 215 LFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLC 274
           L   M  +   P VV  + L++G C  G  ++   L   ML+ G +PNL+TFN MID  C
Sbjct: 359 LLEVMVEKDCAPDVVTYSILVNGLCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFC 418

Query: 275 KGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVV 334
           K GK++E + +LELM +    PD  TY++L+DGYC   R+  A  I       G      
Sbjct: 419 KAGKVDEGHKVLELMKEVSCTPDVVTYSTLIDGYCKANRMQDAFAIL------GISPDKA 472

Query: 335 SYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEM 394
           SY+ ++ G C    VEEA  +   +   G   T   Y  ++ GL    +   A K+   M
Sbjct: 473 SYSSMLEGLCSTGKVEEAQEVMDLMTKQGCPPTSSHYALIIGGLCDVERGDEALKMLQVM 532

Query: 395 KLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRL 454
                EP+L TY+ILI+GLCK   V++A+ +  ++        +  +  LIDG CK  ++
Sbjct: 533 SERGCEPNLYTYSILINGLCKTKRVEDAINVLDVMLEKGCVPDVATYTSLIDGFCKINKM 592

Query: 455 DNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTL 514
           D A++ F  +   G  P  + Y+I+I G C+ G +EKA + +  M + GC P+  T+ +L
Sbjct: 593 DAAYQCFKTMRDSGCEPDKLAYNILISGFCQSGNVEKAIEVMQLMLEKGCNPDAATYFSL 652

Query: 515 MHGF 518
           M   
Sbjct: 653 MRSL 656



 Score =  245 bits (626), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 146/511 (28%), Positives = 257/511 (50%), Gaps = 30/511 (5%)

Query: 61  YFFGYMTHMQPSPPI-SSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINC 119
           Y F       PS P  S++  L    ++  +   V+    ++++    PD +T N ++  
Sbjct: 9   YSFFRERFSDPSKPSNSTYGALITGFSRAGNSKMVLEIANEMLARRFSPDVITHNTILKA 68

Query: 120 F---GNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHK 176
           +   G+ +R L   +  +   W           P   TY  LI+G C+   +  A +L  
Sbjct: 69  YCQIGDLDRAL---SHFRGKMW---------CSPTAFTYCILIHGLCQCQRIDEAYQLLD 116

Query: 177 KMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIH 236
           +M+  D         +   Y+ +I  LCK G +D A+ +   M  R   P V+  T+LI 
Sbjct: 117 EMIQKD------CHPDAAVYNCLIAGLCKMGKIDAARNVLKMMLERSCVPDVITYTSLIV 170

Query: 237 GFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNP 296
           G C     +E   L  +M + G  P+ + +N +++ LCK  ++ E + LLE M++ G  P
Sbjct: 171 GCCQTNALDEARKLMEKMKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREP 230

Query: 297 DRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLY 356
           D F+YN+++   C  G+ + A +I   M  K C   VV+YN L++G+CK+  ++EA  L 
Sbjct: 231 DTFSYNTVVACLCESGKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLL 290

Query: 357 RQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKN 416
             ++      TVITY TL+ G  +A +   A ++ ++M    + PDL TYN L+DGLCK 
Sbjct: 291 EDMVGRRCAPTVITYTTLIGGFSRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKA 350

Query: 417 NCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTY 476
             ++EA +L  ++        +  ++ L++GLCK G++D+A  L   + ++G  P +VT+
Sbjct: 351 GKLEEAHELLEVMVEKDCAPDVVTYSILVNGLCKLGKVDDARLLLEMMLERGCQPNLVTF 410

Query: 477 SIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAE 536
           + MI G C+ GK+++ +  L  M++  C P+VVT++TL+ G+ + N+      +L     
Sbjct: 411 NTMIDGFCKAGKVDEGHKVLELMKEVSCTPDVVTYSTLIDGYCKANRMQDAFAIL----- 465

Query: 537 PERNLVPDDTTFSIVVDLLAKDEKYHECSAV 567
               + PD  ++S +++ L    K  E   V
Sbjct: 466 ---GISPDKASYSSMLEGLCSTGKVEEAQEV 493



 Score =  165 bits (418), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 97/347 (27%), Positives = 170/347 (48%), Gaps = 21/347 (6%)

Query: 32  AAVSSPETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHY 91
           A +S      N  L   CK+G   L EA      M     +P + ++++L   + K    
Sbjct: 331 AGISPDLVTYNCLLDGLCKAG--KLEEAHELLEVMVEKDCAPDVVTYSILVNGLCKLGKV 388

Query: 92  DAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPD 151
           D        ++  G  P+ +T N +I+       G C   ++ E   + + M      PD
Sbjct: 389 DDARLLLEMMLERGCQPNLVTFNTMID-------GFCKAGKVDEGHKVLELMKEVSCTPD 441

Query: 152 VITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDK 211
           V+TY TLI+G+C+   +  A  +            L    +  SYS +++ LC  G V++
Sbjct: 442 VVTYSTLIDGYCKANRMQDAFAI------------LGISPDKASYSSMLEGLCSTGKVEE 489

Query: 212 AKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMID 271
           A+E+   M  +G  P       +I G C     +E   +   M + G  PNL T++++I+
Sbjct: 490 AQEVMDLMTKQGCPPTSSHYALIIGGLCDVERGDEALKMLQVMSERGCEPNLYTYSILIN 549

Query: 272 CLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKH 331
            LCK  ++ +A  +L++M+++G  PD  TY SL+DG+C + ++D A + F +M   GC+ 
Sbjct: 550 GLCKTKRVEDAINVLDVMLEKGCVPDVATYTSLIDGFCKINKMDAAYQCFKTMRDSGCEP 609

Query: 332 TVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGL 378
             ++YNILI+G+C+  NVE+A+ + + ++  G      TY +L+  L
Sbjct: 610 DKLAYNILISGFCQSGNVEKAIEVMQLMLEKGCNPDAATYFSLMRSL 656



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 68/250 (27%), Positives = 118/250 (47%), Gaps = 35/250 (14%)

Query: 351 EAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYN--- 407
           E  S +R+  S+  + +  TY  L++G  +AG +    ++ +EM      PD+ T+N   
Sbjct: 7   EGYSFFRERFSDPSKPSNSTYGALITGFSRAGNSKMVLEIANEMLARRFSPDVITHNTIL 66

Query: 408 ------------------------------ILIDGLCKNNCVQEAVKLFHMLEMNKFEFG 437
                                         ILI GLC+   + EA +L   +        
Sbjct: 67  KAYCQIGDLDRALSHFRGKMWCSPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDCHPD 126

Query: 438 IEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLL 497
             ++NCLI GLCK G++D A  +   + ++  VP V+TY+ +I G C+   L++A   + 
Sbjct: 127 AAVYNCLIAGLCKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKLME 186

Query: 498 YMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAK 557
            M+++G  P+ V +N L++G  + N+  +V +LL +M E  R   PD  +++ VV  L +
Sbjct: 187 KMKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGRE--PDTFSYNTVVACLCE 244

Query: 558 DEKYHECSAV 567
             KY E   +
Sbjct: 245 SGKYEEAGKI 254


>gi|302781562|ref|XP_002972555.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
 gi|300160022|gb|EFJ26641.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
          Length = 564

 Score =  267 bits (682), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 150/485 (30%), Positives = 258/485 (53%), Gaps = 25/485 (5%)

Query: 75  ISSFNLLFGAVAKNRHYDAVISFYR-KLVSIGLLPDFLTLNILINCFGNKERGLCVENRI 133
           ++ +N++  ++ +       +  +R ++   G+ P  +T N +IN       GLC  N +
Sbjct: 1   VADYNIVLQSLCRAGDTARALEIFRGEMARDGVAPTIVTYNTIIN-------GLCKSNDL 53

Query: 134 KEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNI 193
                LF+ ++  G  PDV+TY TLI+  C+ G+L  A RLH  M S     G +   N+
Sbjct: 54  GAGMELFEELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSS----RGCVP--NV 107

Query: 194 FSYSIIIDSLCKEGLVDKAKELFLEMKGRGIN--PAVVVCTTLIHGFCCAGNWEEVNGLF 251
            +YS++I+ LCK G +D+A+EL  EM  +  +  P ++   + + G C      E   L 
Sbjct: 108 VTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELM 167

Query: 252 IEMLDLGPR--PNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYC 309
             + D   R  P+ +TF+ +ID LCK G+I+EA  + + MI  G  P+  TYN+L++G C
Sbjct: 168 RSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLC 227

Query: 310 LVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTV- 368
              +++ A  +  SM  KG    V++Y++L++ +CK   V+EA+ L   + S G    V 
Sbjct: 228 KADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVL 287

Query: 369 ----ITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVK 424
               +T+N L++G  +AG    A  LF+EM   N++PD+ T+  LIDGLCK   V+ A  
Sbjct: 288 VPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARD 347

Query: 425 LFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLC 484
           +  ++        +  +N L+ GLCK+GR++ A +   ++   G VP  +TY  +++ LC
Sbjct: 348 ILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALC 407

Query: 485 RKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPD 544
           R  + + A   +  ++  G  P+ VT+N L+ G  ++ KT + + +L +M    +   PD
Sbjct: 408 RASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMV--GKGHQPD 465

Query: 545 DTTFS 549
             TF+
Sbjct: 466 SFTFA 470



 Score =  254 bits (650), Expect = 8e-65,   Method: Compositional matrix adjust.
 Identities = 148/449 (32%), Positives = 242/449 (53%), Gaps = 18/449 (4%)

Query: 125 RGLCVENRIKEATWLFKNMIAF-GVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDY 183
           + LC       A  +F+  +A  GV P ++TY T+ING C++ +L   + L +++V    
Sbjct: 9   QSLCRAGDTARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELFEELV---- 64

Query: 184 ENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGN 243
           E G     ++ +Y+ +IDSLCK G +++A+ L  +M  RG  P VV  + LI+G C  G 
Sbjct: 65  ERG--HHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKVGR 122

Query: 244 WEEVNGLFIEML--DLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGL--NPDRF 299
            +E   L  EM        PN++T+N  +D LCK     EA  L+  +    L  +PD  
Sbjct: 123 IDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTV 182

Query: 300 TYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQI 359
           T+++L+DG C  G+ID A  +F  M + G    V++YN L+NG CK   +E A ++   +
Sbjct: 183 TFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESM 242

Query: 360 ISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEP-----DLSTYNILIDGLC 414
           +  GV   VITY+ L+    +A +   A +L   M      P     D  T+NILI G C
Sbjct: 243 VDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIAGAC 302

Query: 415 KNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVV 474
           K    ++A  LF  +     +  +  F  LIDGLCKAG+++ A ++   +   G+ P VV
Sbjct: 303 KAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVV 362

Query: 475 TYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKM 534
           TY+ ++HGLC+ G++E+A  FL  M  +GC P+ +T+ +L++   + ++T   ++L+ ++
Sbjct: 363 TYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSEL 422

Query: 535 AEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
                +  PD  T++I+VD L K  K  +
Sbjct: 423 KSFGWD--PDTVTYNILVDGLWKSGKTEQ 449



 Score =  236 bits (601), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 151/537 (28%), Positives = 257/537 (47%), Gaps = 60/537 (11%)

Query: 42  NEFLHENCKSGIINLNEARY---FFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFY 98
           N  L   C++G    + AR    F G M     +P I ++N +   + K+    A +  +
Sbjct: 5   NIVLQSLCRAG----DTARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELF 60

Query: 99  RKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTL 158
            +LV  G  PD +T N LI+        LC    ++EA  L  +M + G  P+V+TY  L
Sbjct: 61  EELVERGHHPDVVTYNTLID-------SLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVL 113

Query: 159 INGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLE 218
           ING C+ G +  A  L ++M     +       NI +Y+  +D LCK+ +  +A EL   
Sbjct: 114 INGLCKVGRIDEARELIQEMTRKSCD----VLPNIITYNSFLDGLCKQSMTAEACELMRS 169

Query: 219 MKGRG--INPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKG 276
           ++     ++P  V  +TLI G C  G  +E   +F +M+  G  PN++T+N +++ LCK 
Sbjct: 170 LRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKA 229

Query: 277 GKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTV--- 333
            K+  A+ ++E M+ +G+ PD  TY+ L+D +C   R+D A E+   M S+GC   V   
Sbjct: 230 DKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVP 289

Query: 334 --VSYNILINGYCKILNVEEAMSLYRQIISN----------------------------- 362
             V++NILI G CK  N E+A +L+ ++++                              
Sbjct: 290 DKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDIL 349

Query: 363 ------GVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKN 416
                 GV   V+TYN L+ GL ++G+   A +  +EM      PD  TY  L+  LC+ 
Sbjct: 350 DLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRA 409

Query: 417 NCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTY 476
           +   +A++L   L+   ++     +N L+DGL K+G+ + A  +  ++  KG  P   T+
Sbjct: 410 SRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTF 469

Query: 477 SIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHK 533
           +    GL R G L    + L  +   G  P+  T ++++    ++ K   V  ++ +
Sbjct: 470 AACFSGLHRSGNLAGTMELLRVVLAKGMLPDATTCSSILDWVCRSGKLDDVKAMIKE 526



 Score =  234 bits (598), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 138/468 (29%), Positives = 235/468 (50%), Gaps = 24/468 (5%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
           N  +   CK+G  +L EAR   G M+     P + ++++L   + K    D      +++
Sbjct: 76  NTLIDSLCKAG--DLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQEM 133

Query: 102 V--SIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMI--AFGVRPDVITYGT 157
              S  +LP+ +T N  ++       GLC ++   EA  L +++   +  V PD +T+ T
Sbjct: 134 TRKSCDVLPNIITYNSFLD-------GLCKQSMTAEACELMRSLRDGSLRVSPDTVTFST 186

Query: 158 LINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFL 217
           LI+G C+ G +  A  +   M++G Y        N+ +Y+ +++ LCK   +++A  +  
Sbjct: 187 LIDGLCKCGQIDEACSVFDDMIAGGY------VPNVITYNALVNGLCKADKMERAHAMIE 240

Query: 218 EMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLL-----TFNVMIDC 272
            M  +G+ P V+  + L+  FC A   +E   L   M   G  PN+L     TFN++I  
Sbjct: 241 SMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIAG 300

Query: 273 LCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHT 332
            CK G   +A+ L E M+ + L PD  T+ +L+DG C  G+++ AR+I   M + G    
Sbjct: 301 ACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPN 360

Query: 333 VVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFD 392
           VV+YN L++G CK   +EEA     +++S+G     ITY +L+  L +A +   A +L  
Sbjct: 361 VVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVS 420

Query: 393 EMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAG 452
           E+K +  +PD  TYNIL+DGL K+   ++A+ +   +     +     F     GL ++G
Sbjct: 421 ELKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFSGLHRSG 480

Query: 453 RLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYME 500
            L    EL   +  KG++P   T S ++  +CR GKL+     +   E
Sbjct: 481 NLAGTMELLRVVLAKGMLPDATTCSSILDWVCRSGKLDDVKAMIKEFE 528



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 118/374 (31%), Positives = 189/374 (50%), Gaps = 45/374 (12%)

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
           +  Y+I++ SLC+ G   +A E+F     RG                             
Sbjct: 1   VADYNIVLQSLCRAGDTARALEIF-----RG----------------------------- 26

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
           EM   G  P ++T+N +I+ LCK   +     L E +++RG +PD  TYN+L+D  C  G
Sbjct: 27  EMARDGVAPTIVTYNTIINGLCKSNDLGAGMELFEELVERGHHPDVVTYNTLIDSLCKAG 86

Query: 313 RIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQII--SNGVRQTVIT 370
            ++ AR +   M S+GC   VV+Y++LING CK+  ++EA  L +++   S  V   +IT
Sbjct: 87  DLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIIT 146

Query: 371 YNTLLSGLFQAGQAGYAQKLFDEMK--LYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHM 428
           YN+ L GL +      A +L   ++     V PD  T++ LIDGLCK   + EA  +F  
Sbjct: 147 YNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDD 206

Query: 429 LEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGK 488
           +    +   +  +N L++GLCKA +++ A  +   +  KG+ P V+TYS+++   C+  +
Sbjct: 207 MIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASR 266

Query: 489 LEKANDFLLYMEKNGCAPNV-----VTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVP 543
           +++A + L  M   GC PNV     VTFN L+ G  +     +   L  +M    +NL P
Sbjct: 267 VDEALELLHGMASRGCTPNVLVPDKVTFNILIAGACKAGNFEQASALFEEMVA--KNLQP 324

Query: 544 DDTTFSIVVDLLAK 557
           D  TF  ++D L K
Sbjct: 325 DVMTFGALIDGLCK 338



 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 105/313 (33%), Positives = 173/313 (55%), Gaps = 14/313 (4%)

Query: 266 FNVMIDCLCKGGKINEANGLLEL----MIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIF 321
           +N+++  LC+ G    A   LE+    M + G+ P   TYN++++G C    +    E+F
Sbjct: 4   YNIVLQSLCRAGDTARA---LEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELF 60

Query: 322 LSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQA 381
             +  +G    VV+YN LI+  CK  ++EEA  L+  + S G    V+TY+ L++GL + 
Sbjct: 61  EELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKV 120

Query: 382 GQAGYAQKLFDEM--KLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIE 439
           G+   A++L  EM  K  +V P++ TYN  +DGLCK +   EA +L   L         +
Sbjct: 121 GRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPD 180

Query: 440 I--FNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLL 497
              F+ LIDGLCK G++D A  +F  +   G VP V+TY+ +++GLC+  K+E+A+  + 
Sbjct: 181 TVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIE 240

Query: 498 YMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAE---PERNLVPDDTTFSIVVDL 554
            M   G  P+V+T++ L+  F + ++  + +ELLH MA        LVPD  TF+I++  
Sbjct: 241 SMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIAG 300

Query: 555 LAKDEKYHECSAV 567
             K   + + SA+
Sbjct: 301 ACKAGNFEQASAL 313



 Score =  135 bits (341), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 71/203 (34%), Positives = 115/203 (56%), Gaps = 3/203 (1%)

Query: 368 VITYNTLLSGLFQAGQAGYAQKLF-DEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLF 426
           V  YN +L  L +AG    A ++F  EM    V P + TYN +I+GLCK+N +   ++LF
Sbjct: 1   VADYNIVLQSLCRAGDTARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELF 60

Query: 427 HMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRK 486
             L        +  +N LID LCKAG L+ A  L   +  +G VP VVTYS++I+GLC+ 
Sbjct: 61  EELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKV 120

Query: 487 GKLEKANDFLLYMEKNGCA--PNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPD 544
           G++++A + +  M +  C   PN++T+N+ + G  + + T++  EL+  + +    + PD
Sbjct: 121 GRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPD 180

Query: 545 DTTFSIVVDLLAKDEKYHECSAV 567
             TFS ++D L K  +  E  +V
Sbjct: 181 TVTFSTLIDGLCKCGQIDEACSV 203



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 54/178 (30%), Positives = 94/178 (52%), Gaps = 1/178 (0%)

Query: 403 LSTYNILIDGLCKNNCVQEAVKLFH-MLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELF 461
           ++ YNI++  LC+      A+++F   +  +     I  +N +I+GLCK+  L    ELF
Sbjct: 1   VADYNIVLQSLCRAGDTARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELF 60

Query: 462 HKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQN 521
            +L ++G  P VVTY+ +I  LC+ G LE+A      M   GC PNVVT++ L++G  + 
Sbjct: 61  EELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKV 120

Query: 522 NKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKSSYRACLYVT 579
            +  +  EL+ +M     +++P+  T++  +D L K     E   + +S     L V+
Sbjct: 121 GRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVS 178


>gi|255540069|ref|XP_002511099.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223550214|gb|EEF51701.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1151

 Score =  266 bits (681), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 175/556 (31%), Positives = 272/556 (48%), Gaps = 59/556 (10%)

Query: 44  FLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAK----NRHYDAVIS--- 96
            +H  CK G  +L +A   F  MT M   P I ++N L     K     + Y+ +I    
Sbjct: 378 LIHGLCKIG--DLEKAEDLFSEMTMMGIKPDIQTYNCLIEGYYKVQNMEKAYELLIEIKK 435

Query: 97  ----------------------------FYRKLVSIGLLPDFLTLNILINCFGNKERGLC 128
                                        +++++S GL P+ +    ++       +GL 
Sbjct: 436 ENLTANAYMCGAIVNGLCHCGDLTRANELFQEMISWGLKPNIVIYTTIV-------KGLV 488

Query: 129 VENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLI 188
            E R +EA  +   M   G+ PDV  Y T+I GFC+ G +        +M++     GL 
Sbjct: 489 KEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIGFCKAGKMEEGKSYLVEMIA----KGL- 543

Query: 189 SKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVN 248
            K N+++Y   I   C+ G +  A+  F+EM   GI P  V+CT LI G+C  GN  +  
Sbjct: 544 -KPNVYTYGAFIHGYCRAGEMQAAERSFIEMLDSGIAPNDVICTDLIDGYCKDGNTTKAF 602

Query: 249 GLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGY 308
             F  MLD G  P++ T +V+I  L K GK+ EA G+   ++ +GL PD FTY SL+   
Sbjct: 603 AKFRCMLDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKGLVPDVFTYTSLISNL 662

Query: 309 CLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTV 368
           C  G +  A E+   M  KG    +V+YN LING CK+  + +A  L+  I   G+ +  
Sbjct: 663 CKEGDLKAAFELHDDMCKKGINPNIVTYNALINGLCKLGEIAKARELFDGIPEKGLARNS 722

Query: 369 ITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHM 428
           +TY+T+++G  ++     A +LF  MKL  V PD   Y  LIDG CK    ++A+ LF  
Sbjct: 723 VTYSTIIAGYCKSANLTEAFQLFHGMKLVGVPPDSFVYCALIDGCCKAGNTEKALSLF-- 780

Query: 429 LEMNKFEFGIE---IFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCR 485
             +   E GI     FN LIDG  K G+L  A++L   +    + P  VTY+I+I   C 
Sbjct: 781 --LGMVEEGIASTPAFNALIDGFFKLGKLIEAYQLVEDMVDNHITPNHVTYTILIEYHCT 838

Query: 486 KGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDD 545
            G +++A    + M+K    PNV+T+ +L+HG+ +  + S++  L  +M    R + PDD
Sbjct: 839 VGNIKEAEQLFMEMQKRNVMPNVLTYTSLLHGYNRIGRRSEMFSLFDEMV--ARGIKPDD 896

Query: 546 TTFSIVVDLLAKDEKY 561
             +S++VD   K+  +
Sbjct: 897 LAWSVMVDAHLKEGNW 912



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 153/575 (26%), Positives = 253/575 (44%), Gaps = 88/575 (15%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           C+ G   + E ++    M      P + +++++   + +    D  +   R + + GLLP
Sbjct: 243 CRVG--KVEEGKHVLFDMEEKGCIPNLVTYSVVIAGLCRAGDVDEALELKRSMANKGLLP 300

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           D      LI+       G C + R  E   +   M   G++PD + Y  LINGF +  ++
Sbjct: 301 DNYIYATLID-------GFCRQKRSTEGKSMLDEMYTMGLKPDHVAYTALINGFVKQSDI 353

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
             A ++ ++M +         K N F+Y  +I  LCK G ++KA++LF EM   GI P +
Sbjct: 354 GGAFQVKEEMFARKI------KLNTFTYYALIHGLCKIGDLEKAEDLFSEMTMMGIKPDI 407

Query: 229 -----------------------------------VVCTTLIHGFCCAGNWEEVNGLFIE 253
                                               +C  +++G C  G+    N LF E
Sbjct: 408 QTYNCLIEGYYKVQNMEKAYELLIEIKKENLTANAYMCGAIVNGLCHCGDLTRANELFQE 467

Query: 254 MLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGR 313
           M+  G +PN++ +  ++  L K G+  EA  +L +M  +GL+PD F YN+++ G+C  G+
Sbjct: 468 MISWGLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIGFCKAGK 527

Query: 314 IDTAREIFLSMHSKGCKHTVVSYNI----------------------------------- 338
           ++  +   + M +KG K  V +Y                                     
Sbjct: 528 MEEGKSYLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAERSFIEMLDSGIAPNDVICTD 587

Query: 339 LINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYN 398
           LI+GYCK  N  +A + +R ++  GV   V T++ L+ GL + G+   A  +F E+    
Sbjct: 588 LIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKG 647

Query: 399 VEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAW 458
           + PD+ TY  LI  LCK   ++ A +L   +        I  +N LI+GLCK G +  A 
Sbjct: 648 LVPDVFTYTSLISNLCKEGDLKAAFELHDDMCKKGINPNIVTYNALINGLCKLGEIAKAR 707

Query: 459 ELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGF 518
           ELF  +P+KGL    VTYS +I G C+   L +A      M+  G  P+   +  L+ G 
Sbjct: 708 ELFDGIPEKGLARNSVTYSTIIAGYCKSANLTEAFQLFHGMKLVGVPPDSFVYCALIDGC 767

Query: 519 LQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
            +   T K + L   M E      P    F+ ++D
Sbjct: 768 CKAGNTEKALSLFLGMVEEGIASTP---AFNALID 799



 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 151/526 (28%), Positives = 252/526 (47%), Gaps = 15/526 (2%)

Query: 91  YDAVISFYRK------LVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMI 144
           ++ +I  YRK       VS+ L        + + C  +  + L   NR++    ++K M+
Sbjct: 166 FEILIDIYRKKGFLNEAVSVFLGAKTNEFIVGLACCNSLSKDLLKGNRVELFWKVYKGML 225

Query: 145 AFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLC 204
              + PDV TY  LIN +CR G +       K ++    E G I   N+ +YS++I  LC
Sbjct: 226 G-AIVPDVYTYTNLINAYCRVGKVEEG----KHVLFDMEEKGCIP--NLVTYSVVIAGLC 278

Query: 205 KEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLL 264
           + G VD+A EL   M  +G+ P   +  TLI GFC      E   +  EM  +G +P+ +
Sbjct: 279 RAGDVDEALELKRSMANKGLLPDNYIYATLIDGFCRQKRSTEGKSMLDEMYTMGLKPDHV 338

Query: 265 TFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSM 324
            +  +I+   K   I  A  + E M  R +  + FTY +L+ G C +G ++ A ++F  M
Sbjct: 339 AYTALINGFVKQSDIGGAFQVKEEMFARKIKLNTFTYYALIHGLCKIGDLEKAEDLFSEM 398

Query: 325 HSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQA 384
              G K  + +YN LI GY K+ N+E+A  L  +I    +         +++GL   G  
Sbjct: 399 TMMGIKPDIQTYNCLIEGYYKVQNMEKAYELLIEIKKENLTANAYMCGAIVNGLCHCGDL 458

Query: 385 GYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCL 444
             A +LF EM  + ++P++  Y  ++ GL K    +EA+K+  +++       +  +N +
Sbjct: 459 TRANELFQEMISWGLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQGLSPDVFCYNTV 518

Query: 445 IDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGC 504
           I G CKAG+++       ++  KGL P V TY   IHG CR G+++ A    + M  +G 
Sbjct: 519 IIGFCKAGKMEEGKSYLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAERSFIEMLDSGI 578

Query: 505 APNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHEC 564
           APN V    L+ G+ ++  T+K       M   ++ ++PD  T S+++  L+K+ K  E 
Sbjct: 579 APNDVICTDLIDGYCKDGNTTKAFAKFRCML--DQGVLPDVQTHSVLIHGLSKNGKLQEA 636

Query: 565 SAVSKSSYRACLYVTIFQPSSLGSMIGCTVRLMPQPEMSDTLGDDG 610
             V        L   +F  +SL S +     L    E+ D +   G
Sbjct: 637 MGVFSELLDKGLVPDVFTYTSLISNLCKEGDLKAAFELHDDMCKKG 682



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 149/559 (26%), Positives = 244/559 (43%), Gaps = 86/559 (15%)

Query: 55   NLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLN 114
            +L  A   F  M      P I  +  +   + K   ++  I     +   GL PD    N
Sbjct: 457  DLTRANELFQEMISWGLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQGLSPDVFCYN 516

Query: 115  ILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRL 174
             +I        G C   +++E       MIA G++P+V TYG  I+G+CR G +  A R 
Sbjct: 517  TVI-------IGFCKAGKMEEGKSYLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAERS 569

Query: 175  HKKMV-SGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTT 233
              +M+ SG   N +I        + +ID  CK+G   KA   F  M  +G+ P V   + 
Sbjct: 570  FIEMLDSGIAPNDVIC-------TDLIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHSV 622

Query: 234  LIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRG 293
            LIHG    G  +E  G+F E+LD G  P++ T+  +I  LCK G +  A  L + M ++G
Sbjct: 623  LIHGLSKNGKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCKEGDLKAAFELHDDMCKKG 682

Query: 294  LNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNV---- 349
            +NP+  TYN+L++G C +G I  ARE+F  +  KG     V+Y+ +I GYCK  N+    
Sbjct: 683  INPNIVTYNALINGLCKLGEIAKARELFDGIPEKGLARNSVTYSTIIAGYCKSANLTEAF 742

Query: 350  -------------------------------EEAMSLYRQIISNGVRQTVITYNTLLSGL 378
                                           E+A+SL+  ++  G+  T   +N L+ G 
Sbjct: 743  QLFHGMKLVGVPPDSFVYCALIDGCCKAGNTEKALSLFLGMVEEGIASTP-AFNALIDGF 801

Query: 379  FQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGI 438
            F+ G+   A +L ++M   ++ P+  TY ILI+  C    ++EA +LF  ++       +
Sbjct: 802  FKLGKLIEAYQLVEDMVDNHITPNHVTYTILIEYHCTVGNIKEAEQLFMEMQKRNVMPNV 861

Query: 439  EIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIM------------------- 479
              +  L+ G  + GR    + LF ++  +G+ P  + +S+M                   
Sbjct: 862  LTYTSLLHGYNRIGRRSEMFSLFDEMVARGIKPDDLAWSVMVDAHLKEGNWIKALKLVDD 921

Query: 480  ----------------IHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNK 523
                            I  LC+   L +    L  +EK G   ++ T  TL+  F +  +
Sbjct: 922  MLSEGVNVCKNLYTILIDALCKHNNLSEVLKVLDEVEKQGSKLSLATCGTLVCCFHRAGR 981

Query: 524  TSKVVELLHKMAEPERNLV 542
            T + + +L  M     NL+
Sbjct: 982  TDEALRVLESMVRSFLNLL 1000



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 126/416 (30%), Positives = 205/416 (49%), Gaps = 16/416 (3%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CK G  N  +A   F  M      P + + ++L   ++KN      +  + +L+  GL+P
Sbjct: 593 CKDG--NTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKGLVP 650

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           D  T   LI+        LC E  +K A  L  +M   G+ P+++TY  LING C+ G +
Sbjct: 651 DVFTYTSLIS-------NLCKEGDLKAAFELHDDMCKKGINPNIVTYNALINGLCKLGEI 703

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
           + A    +++  G  E GL    N  +YS II   CK   + +A +LF  MK  G+ P  
Sbjct: 704 AKA----RELFDGIPEKGLAR--NSVTYSTIIAGYCKSANLTEAFQLFHGMKLVGVPPDS 757

Query: 229 VVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLEL 288
            V   LI G C AGN E+   LF+ M++ G   +   FN +ID   K GK+ EA  L+E 
Sbjct: 758 FVYCALIDGCCKAGNTEKALSLFLGMVEEGI-ASTPAFNALIDGFFKLGKLIEAYQLVED 816

Query: 289 MIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILN 348
           M+   + P+  TY  L++ +C VG I  A ++F+ M  +     V++Y  L++GY +I  
Sbjct: 817 MVDNHITPNHVTYTILIEYHCTVGNIKEAEQLFMEMQKRNVMPNVLTYTSLLHGYNRIGR 876

Query: 349 VEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNI 408
             E  SL+ ++++ G++   + ++ ++    + G    A KL D+M    V    + Y I
Sbjct: 877 RSEMFSLFDEMVARGIKPDDLAWSVMVDAHLKEGNWIKALKLVDDMLSEGVNVCKNLYTI 936

Query: 409 LIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKL 464
           LID LCK+N + E +K+   +E    +  +     L+    +AGR D A  +   +
Sbjct: 937 LIDALCKHNNLSEVLKVLDEVEKQGSKLSLATCGTLVCCFHRAGRTDEALRVLESM 992



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 117/393 (29%), Positives = 198/393 (50%), Gaps = 42/393 (10%)

Query: 185 NGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGR---------------------- 222
           NG  S +++  + I+ID   K+G +++A  +FL  K                        
Sbjct: 155 NGSSSSSSVVVFEILIDIYRKKGFLNEAVSVFLGAKTNEFIVGLACCNSLSKDLLKGNRV 214

Query: 223 ------------GINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMI 270
                        I P V   T LI+ +C  G  EE   +  +M + G  PNL+T++V+I
Sbjct: 215 ELFWKVYKGMLGAIVPDVYTYTNLINAYCRVGKVEEGKHVLFDMEEKGCIPNLVTYSVVI 274

Query: 271 DCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCK 330
             LC+ G ++EA  L   M  +GL PD + Y +L+DG+C   R    + +   M++ G K
Sbjct: 275 AGLCRAGDVDEALELKRSMANKGLLPDNYIYATLIDGFCRQKRSTEGKSMLDEMYTMGLK 334

Query: 331 HTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKL 390
              V+Y  LING+ K  ++  A  +  ++ +  ++    TY  L+ GL + G    A+ L
Sbjct: 335 PDHVAYTALINGFVKQSDIGGAFQVKEEMFARKIKLNTFTYYALIHGLCKIGDLEKAEDL 394

Query: 391 FDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNC--LIDGL 448
           F EM +  ++PD+ TYN LI+G  K   +++A +L  ++E+ K       + C  +++GL
Sbjct: 395 FSEMTMMGIKPDIQTYNCLIEGYYKVQNMEKAYEL--LIEIKKENLTANAYMCGAIVNGL 452

Query: 449 CKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNV 508
           C  G L  A ELF ++   GL P +V Y+ ++ GL ++G+ E+A   L  M+  G +P+V
Sbjct: 453 CHCGDLTRANELFQEMISWGLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQGLSPDV 512

Query: 509 VTFNTLMHGFLQNNK----TSKVVELLHKMAEP 537
             +NT++ GF +  K     S +VE++ K  +P
Sbjct: 513 FCYNTVIIGFCKAGKMEEGKSYLVEMIAKGLKP 545



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 88/353 (24%), Positives = 138/353 (39%), Gaps = 68/353 (19%)

Query: 235 IHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGL 294
           +HGF    NW     +F +        NL TF+++   LC  G    A  +LE MI    
Sbjct: 90  LHGFF---NWVNSRTVFSQ--------NLSTFSILSLILCNSGLFGNAANVLERMIDT-R 137

Query: 295 NPDRFTYNS----------------------LMDGYCLVGRIDTAREIFLSMHS------ 326
           NP     +S                      L+D Y   G ++ A  +FL   +      
Sbjct: 138 NPHVKILDSIIKCYKEINGSSSSSSVVVFEILIDIYRKKGFLNEAVSVFLGAKTNEFIVG 197

Query: 327 ------------------------KGCKHTVV----SYNILINGYCKILNVEEAMSLYRQ 358
                                   KG    +V    +Y  LIN YC++  VEE   +   
Sbjct: 198 LACCNSLSKDLLKGNRVELFWKVYKGMLGAIVPDVYTYTNLINAYCRVGKVEEGKHVLFD 257

Query: 359 IISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNC 418
           +   G    ++TY+ +++GL +AG    A +L   M    + PD   Y  LIDG C+   
Sbjct: 258 MEEKGCIPNLVTYSVVIAGLCRAGDVDEALELKRSMANKGLLPDNYIYATLIDGFCRQKR 317

Query: 419 VQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSI 478
             E   +   +     +     +  LI+G  K   +  A+++  ++  + +     TY  
Sbjct: 318 STEGKSMLDEMYTMGLKPDHVAYTALINGFVKQSDIGGAFQVKEEMFARKIKLNTFTYYA 377

Query: 479 MIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELL 531
           +IHGLC+ G LEKA D    M   G  P++ T+N L+ G+ +     K  ELL
Sbjct: 378 LIHGLCKIGDLEKAEDLFSEMTMMGIKPDIQTYNCLIEGYYKVQNMEKAYELL 430


>gi|296085044|emb|CBI28459.3| unnamed protein product [Vitis vinifera]
          Length = 973

 Score =  266 bits (679), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 150/467 (32%), Positives = 243/467 (52%), Gaps = 15/467 (3%)

Query: 87  KNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAF 146
           K R  D  I   R +V  GL+PD  T +ILIN       G C+E R +EA  +   MI  
Sbjct: 253 KARLLDEAIELKRSMVDKGLVPDLYTYDILIN-------GFCMEKRSREAKLMLLEMIDV 305

Query: 147 GVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKE 206
           G++P+ ITY  LI+GF R G++  A R+  +MV+   E       N+  ++ +++ +CK 
Sbjct: 306 GLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIE------ANLIIWNTLLNGVCKA 359

Query: 207 GLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTF 266
           G ++KA E+  EM  +G+ P     + LI G C   N      L  EM      P +LT+
Sbjct: 360 GKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTY 419

Query: 267 NVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHS 326
           +V+I+ LC+ G +   N +L  M+  GL P+   Y +LM  +   GR++ +R I   M  
Sbjct: 420 SVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMRE 479

Query: 327 KGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGY 386
           +G    V  YN LI G+CK   +EEA +   +++   +R    TY   + G  +AG+   
Sbjct: 480 QGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEI 539

Query: 387 AQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLID 446
           A + F+EM    V P++  Y  LI+G CK   V EA  +F  +   +    ++ ++ LI 
Sbjct: 540 ADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIH 599

Query: 447 GLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAP 506
           GL + G++  A+ +F +L +KGL+P   TY+ +I G C++G ++KA+  L  M   G  P
Sbjct: 600 GLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINP 659

Query: 507 NVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
           ++VT+N L+ G  +  +  +   L   +    R L P+  T++ +VD
Sbjct: 660 DIVTYNILIDGLCKAGEIERAKNLFDDIE--GRGLTPNCVTYAAMVD 704



 Score =  236 bits (601), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 150/523 (28%), Positives = 259/523 (49%), Gaps = 19/523 (3%)

Query: 37  PETQLNEFLHE-NCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVI 95
           P++Q    L E +C+    N+  A      M   + +P + +++++   + +  +     
Sbjct: 379 PDSQTYSLLIEGHCRGQ--NMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTN 436

Query: 96  SFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITY 155
           +  R++V  GL P+ +    L+            E R++E+  + + M   G+ PDV  Y
Sbjct: 437 AILREMVMNGLKPNAVVYTTLMTAHAK-------EGRVEESRMILERMREQGILPDVFCY 489

Query: 156 GTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKEL 215
            +LI GFC+   +  A     +M+    E  L  + N  +Y   ID   K G ++ A   
Sbjct: 490 NSLIIGFCKAKRMEEARTYLMEML----ERRL--RPNAHTYGAFIDGYSKAGEMEIADRY 543

Query: 216 FLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCK 275
           F EM   G+ P V + T LI G C  GN  E   +F  +L      ++ T++V+I  L +
Sbjct: 544 FNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSR 603

Query: 276 GGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVS 335
            GK++EA G+   + ++GL P+ FTYNSL+ G C  G +D A ++   M  KG    +V+
Sbjct: 604 NGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVT 663

Query: 336 YNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMK 395
           YNILI+G CK   +E A +L+  I   G+    +TY  ++ G  ++     A +L +EM 
Sbjct: 664 YNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEML 723

Query: 396 LYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLD 455
           L  V PD   YN++++  CK    ++A+ LF  +    F   +  FN LI+G CK+G+L 
Sbjct: 724 LRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFASTVS-FNTLIEGYCKSGKLQ 782

Query: 456 NAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLM 515
            A  L  ++ +K  +P  VTY+ +I   C+ G + +A    L M++    P   T+ +L+
Sbjct: 783 EANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLL 842

Query: 516 HGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKD 558
           HG+      S+V  L  +M    + + PD  T+ +++D   ++
Sbjct: 843 HGYHNIGNMSEVSALFEEMV--AKGIEPDKMTYYVMIDAYCRE 883



 Score =  215 bits (547), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 147/527 (27%), Positives = 261/527 (49%), Gaps = 70/527 (13%)

Query: 91  YDAVISFYRKL------VSIGLLP-DFLTLNILINCFGNKERGLCVENRIKEATW-LFKN 142
           +D ++  YRK+      V++ L P +F     L++C  N   G  ++    E  W +F  
Sbjct: 157 FDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSC--NSLLGDLLKGNKVELFWKVFDG 214

Query: 143 MIAFGVRPDVITYGTLINGFCRTGN-----------------LSVALRLHKKMVSGDYEN 185
           M A  V PDV TY  +I+  C+ GN                 L  A+ L + MV    + 
Sbjct: 215 MCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKARLLDEAIELKRSMV----DK 270

Query: 186 GLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWE 245
           GL+   ++++Y I+I+  C E    +AK + LEM   G+ P  +    LI GF   G+ E
Sbjct: 271 GLVP--DLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIE 328

Query: 246 EVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLM 305
           +   +  EM+  G   NL+ +N +++ +CK GK+ +A  +++ M+++G+ PD  TY+ L+
Sbjct: 329 QAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLI 388

Query: 306 DGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVR 365
           +G+C    +  A E+   M  +    TV++Y+++ING C+  N++   ++ R+++ NG++
Sbjct: 389 EGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLK 448

Query: 366 QTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEA-VK 424
              + Y TL++   + G+   ++ + + M+   + PD+  YN LI G CK   ++EA   
Sbjct: 449 PNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTY 508

Query: 425 LFHMLEM----NKFEFG------------------------------IEIFNCLIDGLCK 450
           L  MLE     N   +G                              + I+  LI+G CK
Sbjct: 509 LMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCK 568

Query: 451 AGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVT 510
            G +  A+ +F  +  + ++  V TYS++IHGL R GK+ +A      +++ G  PN  T
Sbjct: 569 EGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFT 628

Query: 511 FNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAK 557
           +N+L+ G  +     K  +LL +M    + + PD  T++I++D L K
Sbjct: 629 YNSLISGSCKQGNVDKASQLLEEMC--IKGINPDIVTYNILIDGLCK 673



 Score =  208 bits (529), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 135/465 (29%), Positives = 225/465 (48%), Gaps = 16/465 (3%)

Query: 66  MTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKER 125
           M  ++P+  +  +  L  A AK    +       ++   G+LPD    N LI        
Sbjct: 444 MNGLKPNAVV--YTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLI-------I 494

Query: 126 GLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYEN 185
           G C   R++EA      M+   +RP+  TYG  I+G+ + G + +A R   +M+S     
Sbjct: 495 GFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSC---- 550

Query: 186 GLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWE 245
           G++    I  Y+ +I+  CKEG V +A  +F  +  R +   V   + LIHG    G   
Sbjct: 551 GVLPNVGI--YTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMH 608

Query: 246 EVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLM 305
           E  G+F E+ + G  PN  T+N +I   CK G +++A+ LLE M  +G+NPD  TYN L+
Sbjct: 609 EAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILI 668

Query: 306 DGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVR 365
           DG C  G I+ A+ +F  +  +G     V+Y  +++GYCK  N   A  L  +++  GV 
Sbjct: 669 DGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVP 728

Query: 366 QTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKL 425
                YN +L+   +  +   A  LF EM        +S +N LI+G CK+  +QEA  L
Sbjct: 729 PDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFASTVS-FNTLIEGYCKSGKLQEANHL 787

Query: 426 FHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCR 485
              +   +F      +  LID  CKAG +  A  L+ ++ ++ ++PT  TY+ ++HG   
Sbjct: 788 LEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHN 847

Query: 486 KGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVEL 530
            G + + +     M   G  P+ +T+  ++  + +     +  +L
Sbjct: 848 IGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKL 892



 Score =  168 bits (426), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 121/453 (26%), Positives = 207/453 (45%), Gaps = 47/453 (10%)

Query: 48  NCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLL 107
           +CK G  N+ EA   F ++   +    + ++++L   +++N         + +L   GLL
Sbjct: 566 HCKEG--NVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLL 623

Query: 108 PDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGN 167
           P+  T N LI+       G C +  + +A+ L + M   G+ PD++TY  LI+G C+ G 
Sbjct: 624 PNAFTYNSLIS-------GSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGE 676

Query: 168 LSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPA 227
           +  A  L       D   G     N  +Y+ ++D  CK      A +L  EM  RG+ P 
Sbjct: 677 IERAKNLF------DDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPD 730

Query: 228 VVVCTTLIHGFCCAGN-WEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLL 286
             +   +++ FCC    +E+   LF EML+ G   + ++FN +I+  CK GK+ EAN LL
Sbjct: 731 AFIYNVILN-FCCKEEKFEKALDLFQEMLEKG-FASTVSFNTLIEGYCKSGKLQEANHLL 788

Query: 287 ELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKI 346
           E MI++   P+  TY SL+D  C  G +  A+ ++L M  +    T  +Y  L++GY  I
Sbjct: 789 EEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNI 848

Query: 347 LNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTY 406
            N+ E  +L+ ++++ G+    +TY  ++    + G    A KL DE             
Sbjct: 849 GNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDE------------- 895

Query: 407 NILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQ 466
            IL+ G               M   + F  G+   + +  G   AG +D A E+   + +
Sbjct: 896 -ILVKG---------------MPMKSGFRLGLPTCSVIARGFQIAGNMDEAAEVLRSMVK 939

Query: 467 KGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYM 499
            G V    +   ++ G       E +++ L  M
Sbjct: 940 FGWVSNTTSLGDLVDGNQNGANSEDSDNLLKQM 972



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 98/339 (28%), Positives = 174/339 (51%), Gaps = 26/339 (7%)

Query: 249 GLFIEMLD--LGP-----RPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTY 301
           G  +E ++  LGP     RP+LL+ N ++  L KG K+     + + M    + PD +TY
Sbjct: 168 GFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVELFWKVFDGMCAHKVLPDVYTY 227

Query: 302 NSLMDGYCLVGRIDTAREIFL-----------------SMHSKGCKHTVVSYNILINGYC 344
            +++  +C VG +  A+ + L                 SM  KG    + +Y+ILING+C
Sbjct: 228 TNMISAHCKVGNVKDAKRVLLEMGEKARLLDEAIELKRSMVDKGLVPDLYTYDILINGFC 287

Query: 345 KILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLS 404
                 EA  +  ++I  G++   ITYN L+ G  + G    A ++ DEM    +E +L 
Sbjct: 288 MEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLI 347

Query: 405 TYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKL 464
            +N L++G+CK   +++A+++   +     E   + ++ LI+G C+   +  A+EL  ++
Sbjct: 348 IWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEM 407

Query: 465 PQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKT 524
            ++ L PTV+TYS++I+GLCR G L+  N  L  M  NG  PN V + TLM    +  + 
Sbjct: 408 KKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRV 467

Query: 525 SKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
            +   +L +M   E+ ++PD   ++ ++    K ++  E
Sbjct: 468 EESRMILERMR--EQGILPDVFCYNSLIIGFCKAKRMEE 504



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/175 (25%), Positives = 84/175 (48%), Gaps = 23/175 (13%)

Query: 398 NVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNC--LIDGLCKAGRLD 455
           N  P+   +++L+D   K   + EAV +F  L    FEF   + +C  L+  L K  +++
Sbjct: 149 NGSPNSVIFDMLMDSYRKMGFLVEAVNVF--LGPKNFEFRPSLLSCNSLLGDLLKGNKVE 206

Query: 456 NAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYM-EK------------- 501
             W++F  +    ++P V TY+ MI   C+ G ++ A   LL M EK             
Sbjct: 207 LFWKVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKARLLDEAIELKRS 266

Query: 502 ---NGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
               G  P++ T++ L++GF    ++ +   +L +M +    L P+  T++ ++D
Sbjct: 267 MVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDV--GLKPEPITYNALID 319


>gi|222613081|gb|EEE51213.1| hypothetical protein OsJ_32035 [Oryza sativa Japonica Group]
          Length = 861

 Score =  266 bits (679), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 163/481 (33%), Positives = 252/481 (52%), Gaps = 31/481 (6%)

Query: 58  EARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIG---LLPDFLTLN 114
           +AR+ F  +        I   N     VA++    A +S Y ++   G   + PD  T  
Sbjct: 33  DARHVFDELLRRGRGASIYGLNRALADVARHSPA-AAVSRYNRMARAGADEVTPDLCTYG 91

Query: 115 ILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRL 174
           ILI C        C   R+        N+I  G R + IT+  L+ G C     S A+ +
Sbjct: 92  ILIGC-------CCRAGRLDLGFAALGNVIKKGFRVEAITFTPLLKGLCADKRTSDAMDI 144

Query: 175 HKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEM---KGRGINPAVVVC 231
             + ++   E G I   N+FSY+ +++ LC E    +A EL   M   +G G  P VV  
Sbjct: 145 VLRRMT---ELGCIP--NVFSYNNLLNGLCDENRSQEALELLHMMADDRGGGSPPDVVSY 199

Query: 232 TTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKG------------GKI 279
           TT+I+GF   G+ ++    + EMLD G  P+++T++ +I  LCKG            G++
Sbjct: 200 TTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKGQAMDKPWSHCKEGRV 259

Query: 280 NEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNIL 339
            E+  L +LM++ G+ PD  TY++L+DGYCL G++D A ++   M S G K   V+Y+ L
Sbjct: 260 IESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTL 319

Query: 340 INGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNV 399
           INGYCKI  +E+A+ L++++ S+GV   +ITYN +L GLFQ  +   A++L+  +     
Sbjct: 320 INGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGT 379

Query: 400 EPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWE 459
           + +LSTYNI++ GLCKN    +A+++F  L +   +     FN +ID L K GR D A +
Sbjct: 380 QIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKD 439

Query: 460 LFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFL 519
           LF      GLVP   TY +M   +  +G LE+ +   L ME NGC  +    N ++   L
Sbjct: 440 LFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELL 499

Query: 520 Q 520
           Q
Sbjct: 500 Q 500



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 54/226 (23%), Positives = 107/226 (47%), Gaps = 14/226 (6%)

Query: 350 EEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLY---NVEPDLSTY 406
           E+A  ++ +++  G   ++   N  L+ + +   A    + ++ M       V PDL TY
Sbjct: 32  EDARHVFDELLRRGRGASIYGLNRALADVARHSPAAAVSR-YNRMARAGADEVTPDLCTY 90

Query: 407 NILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWEL-FHKLP 465
            ILI   C+   +         +    F      F  L+ GLC   R  +A ++   ++ 
Sbjct: 91  GILIGCCCRAGRLDLGFAALGNVIKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMT 150

Query: 466 QKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKN---GCAPNVVTFNTLMHGFLQNN 522
           + G +P V +Y+ +++GLC + + ++A + L  M  +   G  P+VV++ T+++GF +  
Sbjct: 151 ELGCIPNVFSYNNLLNGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEG 210

Query: 523 KTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAK----DEKYHEC 564
            + K     H+M +  R ++PD  T+S ++  L K    D+ +  C
Sbjct: 211 DSDKAYSTYHEMLD--RGILPDVVTYSSIIAALCKGQAMDKPWSHC 254


>gi|302756343|ref|XP_002961595.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
 gi|300170254|gb|EFJ36855.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
          Length = 603

 Score =  266 bits (679), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 156/492 (31%), Positives = 254/492 (51%), Gaps = 15/492 (3%)

Query: 66  MTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKER 125
           M     SP   S+ +L   +AK    +     ++KL+  G+ P  +    LI+       
Sbjct: 1   MNERNVSPDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIH------- 53

Query: 126 GLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYEN 185
           GLC+ N   +A  LF +M   G  P  +TY  +I+  C+ G L  A  L KKM+    E+
Sbjct: 54  GLCMANSFDDARELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMI----ED 109

Query: 186 GLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWE 245
           G +   ++ +Y+ ++D LCK G V++A  LF EM+  G  P      T+I G C     +
Sbjct: 110 GHVP--DVVTYNTVMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKID 167

Query: 246 EVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLM 305
           +   +F EM      P+  ++ ++ID L K GK+NEA  L   M+  G+ P   TYN ++
Sbjct: 168 QACQVFHEMEARDIPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVI 227

Query: 306 DGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVR 365
            G CL   +D A E+F SM SKGC+ +  ++NILI+ +CK   ++EA  L +++  +G  
Sbjct: 228 HGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHV 287

Query: 366 QTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKL 425
             V+TY+TL+SGL    +   A+ L ++M     +P + T N LI GLCK   ++EA ++
Sbjct: 288 PDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREV 347

Query: 426 FHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCR 485
              +  +     +  +N L+ G C+AG+ + A EL   +  +GL P VVTY+ ++ GLC+
Sbjct: 348 LDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCK 407

Query: 486 KGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDD 545
             +L +A      M+ +GCAPN+ T+  L+ GF    +    ++L  +M      + PD 
Sbjct: 408 ANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCA--GISPDH 465

Query: 546 TTFSIVVDLLAK 557
             +  +   L K
Sbjct: 466 VVYGTLAAELCK 477



 Score =  259 bits (662), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 148/465 (31%), Positives = 239/465 (51%), Gaps = 15/465 (3%)

Query: 32  AAVSSPETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHY 91
           + V+         +H  C +   + ++AR  F  M      P   ++N++  A  K    
Sbjct: 39  SGVTPSTVAYTSLIHGLCMAN--SFDDARELFADMNRRGCPPSPVTYNVIIDASCKRGML 96

Query: 92  DAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPD 151
           +      +K++  G +PD +T N +++       GLC   R++EA  LF  M   G  P+
Sbjct: 97  EEACDLIKKMIEDGHVPDVVTYNTVMD-------GLCKSGRVEEALLLFNEMERLGCTPN 149

Query: 152 VITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDK 211
             ++ T+I G C+   +  A ++  +M + D         + +SY I+ID L K G +++
Sbjct: 150 RRSHNTIILGLCQQSKIDQACQVFHEMEARDI------PPDSWSYGILIDGLAKAGKLNE 203

Query: 212 AKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMID 271
           A +LF  M   GI P+ V    +IHG C A   +E   LF  M   G RP+  TFN++ID
Sbjct: 204 AYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILID 263

Query: 272 CLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKH 331
             CK GK++EA  LL+ M   G  PD  TY++L+ G C + R+D AR +   M  + CK 
Sbjct: 264 AHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKP 323

Query: 332 TVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLF 391
           TVV+ N LI+G CK   ++EA  +   ++S+G    V+TYNTL+ G  +AGQ   A++L 
Sbjct: 324 TVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELL 383

Query: 392 DEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKA 451
            +M    + P++ TY  L+ GLCK N + EA  +F  ++ +     +  +  LI G C A
Sbjct: 384 SDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSA 443

Query: 452 GRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFL 496
           G++D   +LF ++   G+ P  V Y  +   LC+ G+  +A + L
Sbjct: 444 GQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEIL 488



 Score =  253 bits (646), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 152/501 (30%), Positives = 246/501 (49%), Gaps = 13/501 (2%)

Query: 55  NLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLN 114
            LN+AR  F  + H   +P   ++  L   +     +D     +  +   G  P  +T N
Sbjct: 25  KLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYN 84

Query: 115 ILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRL 174
           ++I+         C    ++EA  L K MI  G  PDV+TY T+++G C++G +  AL L
Sbjct: 85  VIIDAS-------CKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSGRVEEALLL 137

Query: 175 HKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTL 234
             +M        L    N  S++ II  LC++  +D+A ++F EM+ R I P       L
Sbjct: 138 FNEM------ERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARDIPPDSWSYGIL 191

Query: 235 IHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGL 294
           I G   AG   E   LF  MLD G  P+ +T+NV+I  +C    ++EA  L + M  +G 
Sbjct: 192 IDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGC 251

Query: 295 NPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMS 354
            P RFT+N L+D +C  G++D A  +   M   G    VV+Y+ LI+G C I  V++A  
Sbjct: 252 RPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARH 311

Query: 355 LYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLC 414
           L   ++    + TV+T NTL+ GL +AG+   A+++ D M      PD+ TYN L+ G C
Sbjct: 312 LLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHC 371

Query: 415 KNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVV 474
           +    + A +L   +        +  +  L+ GLCKA RL  A  +F ++   G  P + 
Sbjct: 372 RAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLF 431

Query: 475 TYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKM 534
           TY+ +I G C  G+++        M   G +P+ V + TL     ++ ++++ +E+L + 
Sbjct: 432 TYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREG 491

Query: 535 AEPERNLVPDDTTFSIVVDLL 555
            E  R+    D  +   VD L
Sbjct: 492 RESLRSEAWGDEVYRFAVDGL 512



 Score =  225 bits (573), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 136/450 (30%), Positives = 220/450 (48%), Gaps = 17/450 (3%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CKSG   + EA   F  M  +  +P   S N +   + +    D     + ++ +  + P
Sbjct: 126 CKSG--RVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARDIPP 183

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           D  +  ILI+       GL    ++ EA  LF+ M+  G+ P  +TY  +I+G C    L
Sbjct: 184 DSWSYGILID-------GLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTL 236

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
             AL L K M S         + + F+++I+ID+ CK G +D+A  L   M   G  P V
Sbjct: 237 DEALELFKSMRSKG------CRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDV 290

Query: 229 VVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLEL 288
           V  +TLI G C     ++   L  +M+    +P ++T N +I  LCK G+I EA  +L+ 
Sbjct: 291 VTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDA 350

Query: 289 MIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILN 348
           M+  G +PD  TYN+L+ G+C  G+ + ARE+   M ++G    VV+Y  L++G CK   
Sbjct: 351 MVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANR 410

Query: 349 VEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNI 408
           + EA  ++ Q+ S+G    + TY  L+ G   AGQ     KLF EM    + PD   Y  
Sbjct: 411 LPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGT 470

Query: 409 LIDGLCKNNCVQEAVKLFH--MLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQ 466
           L   LCK+     A+++       +    +G E++   +DGL  AG+++ A      + +
Sbjct: 471 LAAELCKSGRSARALEILREGRESLRSEAWGDEVYRFAVDGLLDAGKMEMALGFVRDMVR 530

Query: 467 KGLVPTVVTYSIMIHGLCRKGKLEKANDFL 496
            G +P     + ++ GLC+ G+  +A   L
Sbjct: 531 GGQLPAPERCASLVAGLCKSGQGGEARAVL 560



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 104/381 (27%), Positives = 175/381 (45%), Gaps = 23/381 (6%)

Query: 20  KLSSLFKSPRQI--AAVSSPETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISS 77
           KL+  +K  R++  + ++      N  +H  C +    L+EA   F  M      P   +
Sbjct: 200 KLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLA--YTLDEALELFKSMRSKGCRPSRFT 257

Query: 78  FNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEAT 137
           FN+L  A  K    D      +++   G +PD +T + LI+       GLC   R+ +A 
Sbjct: 258 FNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLIS-------GLCSIARVDDAR 310

Query: 138 WLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYS 197
            L ++M+    +P V+T  TLI+G C+ G +  A  +   MVS           ++ +Y+
Sbjct: 311 HLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSG------QSPDVVTYN 364

Query: 198 IIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDL 257
            ++   C+ G  ++A+EL  +M  RG+ P VV  T L+ G C A    E  G+F +M   
Sbjct: 365 TLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSS 424

Query: 258 GPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTA 317
           G  PNL T+  +I   C  G+++    L   M+  G++PD   Y +L    C  GR   A
Sbjct: 425 GCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARA 484

Query: 318 REIFL----SMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNT 373
            EI      S+ S+     V  Y   ++G      +E A+   R ++  G         +
Sbjct: 485 LEILREGRESLRSEAWGDEV--YRFAVDGLLDAGKMEMALGFVRDMVRGGQLPAPERCAS 542

Query: 374 LLSGLFQAGQAGYAQKLFDEM 394
           L++GL ++GQ G A+ + +E+
Sbjct: 543 LVAGLCKSGQGGEARAVLEEI 563



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 67/194 (34%), Positives = 106/194 (54%), Gaps = 2/194 (1%)

Query: 370 TYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHML 429
           +Y  L+ GL +AG+   A+ LF ++    V P    Y  LI GLC  N   +A +LF  +
Sbjct: 12  SYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADM 71

Query: 430 EMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKL 489
                      +N +ID  CK G L+ A +L  K+ + G VP VVTY+ ++ GLC+ G++
Sbjct: 72  NRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSGRV 131

Query: 490 EKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFS 549
           E+A      ME+ GC PN  + NT++ G  Q +K  +  ++ H+M    R++ PD  ++ 
Sbjct: 132 EEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEM--EARDIPPDSWSYG 189

Query: 550 IVVDLLAKDEKYHE 563
           I++D LAK  K +E
Sbjct: 190 ILIDGLAKAGKLNE 203



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 66/253 (26%), Positives = 98/253 (38%), Gaps = 52/253 (20%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
           N  +H  CK+G I   EAR     M     SP + ++N L     +    +        +
Sbjct: 329 NTLIHGLCKAGRIK--EAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDM 386

Query: 102 VSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLING 161
           V+ GL P+ +T   L++       GLC  NR+ EA  +F  M + G  P++ TY  LI G
Sbjct: 387 VARGLAPNVVTYTALVS-------GLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILG 439

Query: 162 FCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLE--- 218
           FC  G +   L+L  +MV        IS  ++  Y  +   LCK G   +A E+  E   
Sbjct: 440 FCSAGQVDGGLKLFGEMVCAG-----ISPDHVV-YGTLAAELCKSGRSARALEILREGRE 493

Query: 219 ----------------------------------MKGRGINPAVVVCTTLIHGFCCAGNW 244
                                             M   G  PA   C +L+ G C +G  
Sbjct: 494 SLRSEAWGDEVYRFAVDGLLDAGKMEMALGFVRDMVRGGQLPAPERCASLVAGLCKSGQG 553

Query: 245 EEVNGLFIEMLDL 257
            E   +  E++DL
Sbjct: 554 GEARAVLEEIMDL 566


>gi|302788594|ref|XP_002976066.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
 gi|300156342|gb|EFJ22971.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
          Length = 440

 Score =  266 bits (679), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 158/453 (34%), Positives = 245/453 (54%), Gaps = 32/453 (7%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
           P   ++N L   +          + Y +++  G  PD +T N L++       G C    
Sbjct: 8   PNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLH-------GFCKVGE 60

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
           + EA  +F   +  G  PDV+TY  LINGFC+   L  A R+ ++MVS   EN +    +
Sbjct: 61  LDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVS---ENLV---PD 114

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNG--- 249
           + +Y+ +++ LCK G VD+A+ L ++   +G +P V+  +TLI G C      E+ G   
Sbjct: 115 VVTYNSLVNGLCKNGRVDEARMLIVD---KGFSPNVITYSTLISGLC-----RELRGVSE 166

Query: 250 ---LFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMD 306
              LF  +L  G  P + T+N++ID L K  ++NEA  L   +++ GL PD  TY   +D
Sbjct: 167 ALKLFGSVLKQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFID 226

Query: 307 GYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQ 366
           G C  GR++ A  +   M  KGC   VVS+N +ING CK   V+EA  L   + + G   
Sbjct: 227 GLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSP 286

Query: 367 TVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCK---NNCVQEAV 423
             I++NTL+ G  +AG+   A   F EM    V+P + TYNIL+DGLCK      ++EA+
Sbjct: 287 NAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAI 346

Query: 424 KLFH-MLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHG 482
            LF  M+E  +    +  ++ LIDGL KAG+LD+A  L   +  KG +P V TY+ +I G
Sbjct: 347 TLFDAMIEKGRVP-DVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISG 405

Query: 483 LCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLM 515
           LC   K+++A +  + M + GC P+ +T+ T++
Sbjct: 406 LCGLEKVDEALELFVAMVEKGCVPDTITYGTII 438



 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 141/443 (31%), Positives = 228/443 (51%), Gaps = 22/443 (4%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
           N  L   C  G   +++A+  +  M     SP + ++N L     K    D  +  +   
Sbjct: 14  NALLSGLCNGG--RMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGELDEALKIFDGA 71

Query: 102 VSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLING 161
           V  G +PD +T N LIN       G C  +++ EA  + + M++  + PDV+TY +L+NG
Sbjct: 72  VKRGFVPDVVTYNALIN-------GFCKADKLDEAQRILQRMVSENLVPDVVTYNSLVNG 124

Query: 162 FCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKE-GLVDKAKELFLEMK 220
            C+ G +  A  L   +V   +        N+ +YS +I  LC+E   V +A +LF  + 
Sbjct: 125 LCKNGRVDEARML---IVDKGFS------PNVITYSTLISGLCRELRGVSEALKLFGSVL 175

Query: 221 GRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKIN 280
            +G  P V     LI G        E   LF  ++  G  P+ +T+ V ID LCK G++ 
Sbjct: 176 KQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVE 235

Query: 281 EANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILI 340
           +A  +L+ M ++G  PD  ++N++++G C   R+D A  +   M +KGC    +S+N LI
Sbjct: 236 DALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLI 295

Query: 341 NGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQK---LFDEMKLY 397
            G C+    ++AM+ +++++  GV+ TV+TYN L+ GL +A Q G  ++   LFD M   
Sbjct: 296 CGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEK 355

Query: 398 NVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNA 457
              PD+ TY+ LIDGL K   + +A +L   +E       +  +N LI GLC   ++D A
Sbjct: 356 GRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLEKVDEA 415

Query: 458 WELFHKLPQKGLVPTVVTYSIMI 480
            ELF  + +KG VP  +TY  +I
Sbjct: 416 LELFVAMVEKGCVPDTITYGTII 438



 Score =  224 bits (572), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 130/376 (34%), Positives = 201/376 (53%), Gaps = 9/376 (2%)

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
           N  +Y+ ++  LC  G +  A+ L+  M   G +P VV   TL+HGFC  G  +E   +F
Sbjct: 9   NRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGELDEALKIF 68

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
              +  G  P+++T+N +I+  CK  K++EA  +L+ M+   L PD  TYNSL++G C  
Sbjct: 69  DGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNSLVNGLCKN 128

Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILN-VEEAMSLYRQIISNGVRQTVIT 370
           GR+D AR + +    KG    V++Y+ LI+G C+ L  V EA+ L+  ++  G    V T
Sbjct: 129 GRVDEARMLIVD---KGFSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQGYEPEVPT 185

Query: 371 YNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLE 430
           YN L+ GL +  +   A +LF  +  + +EPD  TY + IDGLCK   V++A+ +   ++
Sbjct: 186 YNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMD 245

Query: 431 MNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLE 490
                  +   N +I+GLCK  R+D A  L   +  KG  P  ++++ +I G CR GK +
Sbjct: 246 EKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWK 305

Query: 491 KANDFLLYMEKNGCAPNVVTFNTLMHGFL---QNNKTSKVVELLHKMAEPERNLVPDDTT 547
           KA      M K G  P VVT+N L+ G     Q  +  + + L   M E  R  VPD  T
Sbjct: 306 KAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGR--VPDVVT 363

Query: 548 FSIVVDLLAKDEKYHE 563
           +S ++D L K  K  +
Sbjct: 364 YSALIDGLGKAGKLDD 379



 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 124/340 (36%), Positives = 195/340 (57%), Gaps = 6/340 (1%)

Query: 219 MKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGK 278
           M+  G  P  +    L+ G C  G   +   L+  M+  G  P+++T+N ++   CK G+
Sbjct: 1   MRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGE 60

Query: 279 INEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNI 338
           ++EA  + +  ++RG  PD  TYN+L++G+C   ++D A+ I   M S+     VV+YN 
Sbjct: 61  LDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNS 120

Query: 339 LINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQA-GYAQKLFDEMKLY 397
           L+NG CK   V+EA  L   I+  G    VITY+TL+SGL +  +    A KLF  +   
Sbjct: 121 LVNGLCKNGRVDEARML---IVDKGFSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQ 177

Query: 398 NVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNA 457
             EP++ TYNILIDGL K + V EA +LF  L  +  E     +   IDGLCKAGR+++A
Sbjct: 178 GYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDA 237

Query: 458 WELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHG 517
             +   + +KG VP VV+++ +I+GLC++ ++++A   L  ME  GC+PN ++FNTL+ G
Sbjct: 238 LLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICG 297

Query: 518 FLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAK 557
             +  K  K +    +M   +R + P   T++I+VD L K
Sbjct: 298 QCRAGKWKKAMTTFKEML--KRGVKPTVVTYNILVDGLCK 335



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 115/339 (33%), Positives = 186/339 (54%), Gaps = 22/339 (6%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKN-RHYDAVISFYRK 100
           N  ++  CK+G   ++EAR     +     SP + +++ L   + +  R     +  +  
Sbjct: 119 NSLVNGLCKNG--RVDEARML---IVDKGFSPNVITYSTLISGLCRELRGVSEALKLFGS 173

Query: 101 LVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLIN 160
           ++  G  P+  T NILI+       GL  E+R+ EA  LF  ++  G+ PD ITY   I+
Sbjct: 174 VLKQGYEPEVPTYNILID-------GLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFID 226

Query: 161 GFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMK 220
           G C+ G +  AL + K M     E G +   ++ S++ +I+ LCKE  VD+A+ L   M+
Sbjct: 227 GLCKAGRVEDALLMLKDM----DEKGCVP--DVVSHNAVINGLCKEKRVDEAEVLLSGME 280

Query: 221 GRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKG---G 277
            +G +P  +   TLI G C AG W++    F EML  G +P ++T+N+++D LCK    G
Sbjct: 281 AKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEG 340

Query: 278 KINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYN 337
           +I EA  L + MI++G  PD  TY++L+DG    G++D AR +  +M +KGC   V +YN
Sbjct: 341 RIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYN 400

Query: 338 ILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLS 376
            LI+G C +  V+EA+ L+  ++  G     ITY T++S
Sbjct: 401 SLISGLCGLEKVDEALELFVAMVEKGCVPDTITYGTIIS 439


>gi|18071423|gb|AAL58282.1|AC068923_24 putative membrane-associated protein [Oryza sativa Japonica Group]
          Length = 952

 Score =  265 bits (678), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 163/481 (33%), Positives = 252/481 (52%), Gaps = 31/481 (6%)

Query: 58  EARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIG---LLPDFLTLN 114
           +AR+ F  +        I   N     VA++    A +S Y ++   G   + PD  T  
Sbjct: 33  DARHVFDELLRRGRGASIYGLNRALADVARHSPA-AAVSRYNRMARAGADEVTPDLCTYG 91

Query: 115 ILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRL 174
           ILI C        C   R+        N+I  G R + IT+  L+ G C     S A+ +
Sbjct: 92  ILIGC-------CCRAGRLDLGFAALGNVIKKGFRVEAITFTPLLKGLCADKRTSDAMDI 144

Query: 175 HKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEM---KGRGINPAVVVC 231
             + ++   E G I   N+FSY+ +++ LC E    +A EL   M   +G G  P VV  
Sbjct: 145 VLRRMT---ELGCIP--NVFSYNNLLNGLCDENRSQEALELLHMMADDRGGGSPPDVVSY 199

Query: 232 TTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKG------------GKI 279
           TT+I+GF   G+ ++    + EMLD G  P+++T++ +I  LCKG            G++
Sbjct: 200 TTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKGQAMDKPWSHCKEGRV 259

Query: 280 NEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNIL 339
            E+  L +LM++ G+ PD  TY++L+DGYCL G++D A ++   M S G K   V+Y+ L
Sbjct: 260 IESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTL 319

Query: 340 INGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNV 399
           INGYCKI  +E+A+ L++++ S+GV   +ITYN +L GLFQ  +   A++L+  +     
Sbjct: 320 INGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGT 379

Query: 400 EPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWE 459
           + +LSTYNI++ GLCKN    +A+++F  L +   +     FN +ID L K GR D A +
Sbjct: 380 QIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKD 439

Query: 460 LFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFL 519
           LF      GLVP   TY +M   +  +G LE+ +   L ME NGC  +    N ++   L
Sbjct: 440 LFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELL 499

Query: 520 Q 520
           Q
Sbjct: 500 Q 500



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 108/388 (27%), Positives = 198/388 (51%), Gaps = 28/388 (7%)

Query: 80  LLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWL 139
           LL G  A  R  DA+    R++  +G +P+  + N L+N       GLC ENR +EA  L
Sbjct: 128 LLKGLCADKRTSDAMDIVLRRMTELGCIPNVFSYNNLLN-------GLCDENRSQEALEL 180

Query: 140 FKNMI---AFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSY 196
              M      G  PDV++Y T+INGF + G+   A   + +M+    + G++   ++ +Y
Sbjct: 181 LHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEML----DRGILP--DVVTY 234

Query: 197 SIIIDSLCK------------EGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNW 244
           S II +LCK            EG V ++++LF  M   G+ P ++  +TLI G+C AG  
Sbjct: 235 SSIIAALCKGQAMDKPWSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKM 294

Query: 245 EEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSL 304
           +E   L   M+ +G +PN +T++ +I+  CK  ++ +A  L + M   G++PD  TYN +
Sbjct: 295 DEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNII 354

Query: 305 MDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGV 364
           + G     R   A+E+++ +   G +  + +YNI+++G CK    ++A+ +++ +    +
Sbjct: 355 LQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDL 414

Query: 365 RQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVK 424
           +    T+N ++  L + G+   A+ LF       + P+  TY ++ + +     ++E  +
Sbjct: 415 KLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQ 474

Query: 425 LFHMLEMNKFEFGIEIFNCLIDGLCKAG 452
           LF  +E N       + N ++  L + G
Sbjct: 475 LFLSMEDNGCTVDSGMLNFIVRELLQRG 502



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 54/226 (23%), Positives = 107/226 (47%), Gaps = 14/226 (6%)

Query: 350 EEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLY---NVEPDLSTY 406
           E+A  ++ +++  G   ++   N  L+ + +   A    + ++ M       V PDL TY
Sbjct: 32  EDARHVFDELLRRGRGASIYGLNRALADVARHSPAAAVSR-YNRMARAGADEVTPDLCTY 90

Query: 407 NILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWEL-FHKLP 465
            ILI   C+   +         +    F      F  L+ GLC   R  +A ++   ++ 
Sbjct: 91  GILIGCCCRAGRLDLGFAALGNVIKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMT 150

Query: 466 QKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKN---GCAPNVVTFNTLMHGFLQNN 522
           + G +P V +Y+ +++GLC + + ++A + L  M  +   G  P+VV++ T+++GF +  
Sbjct: 151 ELGCIPNVFSYNNLLNGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEG 210

Query: 523 KTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAK----DEKYHEC 564
            + K     H+M +  R ++PD  T+S ++  L K    D+ +  C
Sbjct: 211 DSDKAYSTYHEMLD--RGILPDVVTYSSIIAALCKGQAMDKPWSHC 254



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 70/283 (24%), Positives = 119/283 (42%), Gaps = 40/283 (14%)

Query: 31  IAAVSSPETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRH 90
           IAA+   +     + H  CK G   + E+   F  M  +   P I +++ L         
Sbjct: 238 IAALCKGQAMDKPWSH--CKEG--RVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGK 293

Query: 91  YDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRP 150
            D  +     +VS+GL P+ +T + LIN       G C  +R+++A  LFK M + GV P
Sbjct: 294 MDEAMKLLSGMVSVGLKPNTVTYSTLIN-------GYCKISRMEDALVLFKEMESSGVSP 346

Query: 151 DVITYGTLINGFCRTGNLSVALRLHKKMVSGDYE----------NGLIS----------- 189
           D+ITY  ++ G  +T   + A  L+ ++     +          +GL             
Sbjct: 347 DIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMF 406

Query: 190 --------KTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCA 241
                   K    +++I+ID+L K G  D+AK+LF+     G+ P       +       
Sbjct: 407 QNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQ 466

Query: 242 GNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANG 284
           G  EE++ LF+ M D G   +    N ++  L + G +   +G
Sbjct: 467 GLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGVVVVVSG 509


>gi|302775582|ref|XP_002971208.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
 gi|300161190|gb|EFJ27806.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
          Length = 599

 Score =  265 bits (676), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 155/492 (31%), Positives = 255/492 (51%), Gaps = 15/492 (3%)

Query: 66  MTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKER 125
           M     SP   S+ +L   +AK    +   + ++KL+  G+ P  +    LI+       
Sbjct: 1   MNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIH------- 53

Query: 126 GLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYEN 185
           GLC+ N   +A  LF +M   G  P  +TY  +I+  C+ G L  A  L KKM+    E+
Sbjct: 54  GLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMI----ED 109

Query: 186 GLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWE 245
           G +   ++ +Y+ ++D LCK   V++A  LF EM+  G  P      T+I G C     +
Sbjct: 110 GHVP--DVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKID 167

Query: 246 EVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLM 305
           +   +F EM      P+  ++ ++ID L K GK+NEA  L + M+  G+ P   TYN ++
Sbjct: 168 QACQVFHEMEAKDIPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVI 227

Query: 306 DGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVR 365
            G CL   +D A E+F SM SKGC+ +  ++NILI+ +CK   ++EA  L +++  +G  
Sbjct: 228 HGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHV 287

Query: 366 QTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKL 425
             V+TY+TL+SGL    +   A+ L ++M     +P + T N LI GLCK   ++EA ++
Sbjct: 288 PDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREV 347

Query: 426 FHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCR 485
              +  +     +  +N L+ G C+AG+ + A EL   +  +GL P VVTY+ ++ GLC+
Sbjct: 348 LDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCK 407

Query: 486 KGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDD 545
             +L +A      M+ +GCAPN+ T+  L+ GF    +    ++L  +M      + PD 
Sbjct: 408 ANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCA--GISPDH 465

Query: 546 TTFSIVVDLLAK 557
             +  +   L K
Sbjct: 466 VVYGTLAAELCK 477



 Score =  260 bits (665), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 148/465 (31%), Positives = 240/465 (51%), Gaps = 15/465 (3%)

Query: 32  AAVSSPETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHY 91
           + V+         +H  C +   + ++AR  F  M      P   ++N++  A  K    
Sbjct: 39  SGVTPSTVAYTSLIHGLCMAN--SFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGML 96

Query: 92  DAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPD 151
           +      +K++  G +PD +T N +++       GLC  +R++EA  LF  M   G  P+
Sbjct: 97  EEACDLIKKMIEDGHVPDVVTYNTVMD-------GLCKSSRVEEALLLFNEMERLGCTPN 149

Query: 152 VITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDK 211
             ++ T+I G C+   +  A ++  +M + D         + +SY I+ID L K G +++
Sbjct: 150 RRSHNTIILGLCQQSKIDQACQVFHEMEAKDI------PPDSWSYGILIDGLAKAGKLNE 203

Query: 212 AKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMID 271
           A +LF  M   GI P+ V    +IHG C A   +E   LF  M   G RP+  TFN++ID
Sbjct: 204 AYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILID 263

Query: 272 CLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKH 331
             CK GK++EA  LL+ M   G  PD  TY++L+ G C + R+D AR +   M  + CK 
Sbjct: 264 AHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKP 323

Query: 332 TVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLF 391
           TVV+ N LI+G CK   ++EA  +   ++S+G    V+TYNTL+ G  +AGQ   A++L 
Sbjct: 324 TVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELL 383

Query: 392 DEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKA 451
            +M    + P++ TY  L+ GLCK N + EA  +F  ++ +     +  +  LI G C A
Sbjct: 384 SDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSA 443

Query: 452 GRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFL 496
           G++D   +LF ++   G+ P  V Y  +   LC+ G+  +A + L
Sbjct: 444 GQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEIL 488



 Score =  250 bits (639), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 150/501 (29%), Positives = 245/501 (48%), Gaps = 13/501 (2%)

Query: 55  NLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLN 114
            LN+AR  F  + H   +P   ++  L   +     +D     +  +   G  P  +T N
Sbjct: 25  KLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYN 84

Query: 115 ILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRL 174
           ++I+         C    ++EA  L K MI  G  PDV+TY T+++G C++  +  AL L
Sbjct: 85  VMIDAS-------CKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLL 137

Query: 175 HKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTL 234
             +M        L    N  S++ II  LC++  +D+A ++F EM+ + I P       L
Sbjct: 138 FNEM------ERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDIPPDSWSYGIL 191

Query: 235 IHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGL 294
           I G   AG   E   LF  MLD G  P+ +T+NV+I  +C    ++EA  L + M  +G 
Sbjct: 192 IDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGC 251

Query: 295 NPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMS 354
            P RFT+N L+D +C  G++D A  +   M   G    VV+Y+ LI+G C I  V++A  
Sbjct: 252 RPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARH 311

Query: 355 LYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLC 414
           L   ++    + TV+T NTL+ GL +AG+   A+++ D M      PD+ TYN L+ G C
Sbjct: 312 LLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHC 371

Query: 415 KNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVV 474
           +    + A +L   +        +  +  L+ GLCKA RL  A  +F ++   G  P + 
Sbjct: 372 RAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLF 431

Query: 475 TYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKM 534
           TY+ +I G C  G+++        M   G +P+ V + TL     ++ ++++ +E+L + 
Sbjct: 432 TYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREG 491

Query: 535 AEPERNLVPDDTTFSIVVDLL 555
            E  R+    D  +   VD L
Sbjct: 492 RESLRSEAWGDEVYRFAVDGL 512



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 135/450 (30%), Positives = 220/450 (48%), Gaps = 17/450 (3%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CKS    + EA   F  M  +  +P   S N +   + +    D     + ++ +  + P
Sbjct: 126 CKSS--RVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDIPP 183

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           D  +  ILI+       GL    ++ EA  LF+ M+  G+ P  +TY  +I+G C    L
Sbjct: 184 DSWSYGILID-------GLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTL 236

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
             AL L K M S         + + F+++I+ID+ CK G +D+A  L   M   G  P V
Sbjct: 237 DEALELFKSMRSKG------CRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDV 290

Query: 229 VVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLEL 288
           V  +TLI G C     ++   L  +M+    +P ++T N +I  LCK G+I EA  +L+ 
Sbjct: 291 VTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDA 350

Query: 289 MIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILN 348
           M+  G +PD  TYN+L+ G+C  G+ + ARE+   M ++G    VV+Y  L++G CK   
Sbjct: 351 MVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANR 410

Query: 349 VEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNI 408
           + EA  ++ Q+ S+G    + TY  L+ G   AGQ     KLF EM    + PD   Y  
Sbjct: 411 LPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGT 470

Query: 409 LIDGLCKNNCVQEAVKLFH--MLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQ 466
           L   LCK+     A+++       +    +G E++   +DGL +AG+++ A      + +
Sbjct: 471 LAAELCKSGRSARALEILREGRESLRSEAWGDEVYRFAVDGLLEAGKMEMALGFVRDMVR 530

Query: 467 KGLVPTVVTYSIMIHGLCRKGKLEKANDFL 496
            G +P     + ++ GLC+ G+  +A   L
Sbjct: 531 GGQLPAPERCASLVAGLCKSGQGGEARAVL 560



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 100/367 (27%), Positives = 168/367 (45%), Gaps = 21/367 (5%)

Query: 32  AAVSSPETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHY 91
           + ++      N  +H  C +    L+EA   F  M      P   +FN+L  A  K    
Sbjct: 214 SGITPSAVTYNVVIHGMCLA--YTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKL 271

Query: 92  DAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPD 151
           D      +++   G +PD +T + LI+       GLC   R+ +A  L ++M+    +P 
Sbjct: 272 DEAFRLLKRMTDDGHVPDVVTYSTLIS-------GLCSIARVDDARHLLEDMVKRQCKPT 324

Query: 152 VITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDK 211
           V+T  TLI+G C+ G +  A  +   MVS           ++ +Y+ ++   C+ G  ++
Sbjct: 325 VVTQNTLIHGLCKAGRIKEAREVLDAMVSSG------QSPDVVTYNTLVHGHCRAGQTER 378

Query: 212 AKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMID 271
           A+EL  +M  RG+ P VV  T L+ G C A    E  G+F +M   G  PNL T+  +I 
Sbjct: 379 ARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALIL 438

Query: 272 CLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFL----SMHSK 327
             C  G+++    L   M+  G++PD   Y +L    C  GR   A EI      S+ S+
Sbjct: 439 GFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRESLRSE 498

Query: 328 GCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYA 387
                V  Y   ++G  +   +E A+   R ++  G         +L++GL ++GQ G A
Sbjct: 499 AWGDEV--YRFAVDGLLEAGKMEMALGFVRDMVRGGQLPAPERCASLVAGLCKSGQGGEA 556

Query: 388 QKLFDEM 394
           + + +E+
Sbjct: 557 RAVLEEI 563



 Score =  119 bits (298), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 65/194 (33%), Positives = 105/194 (54%), Gaps = 2/194 (1%)

Query: 370 TYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHML 429
           +Y  L+ GL +AG+   A+ LF ++    V P    Y  LI GLC  N   +A +LF  +
Sbjct: 12  SYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADM 71

Query: 430 EMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKL 489
                      +N +ID  CK G L+ A +L  K+ + G VP VVTY+ ++ GLC+  ++
Sbjct: 72  NRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRV 131

Query: 490 EKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFS 549
           E+A      ME+ GC PN  + NT++ G  Q +K  +  ++ H+M    +++ PD  ++ 
Sbjct: 132 EEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEM--EAKDIPPDSWSYG 189

Query: 550 IVVDLLAKDEKYHE 563
           I++D LAK  K +E
Sbjct: 190 ILIDGLAKAGKLNE 203



 Score = 82.0 bits (201), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 66/254 (25%), Positives = 98/254 (38%), Gaps = 52/254 (20%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
           N  +H  CK+G I   EAR     M     SP + ++N L     +    +        +
Sbjct: 329 NTLIHGLCKAGRIK--EAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDM 386

Query: 102 VSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLING 161
           V+ GL P+ +T   L++       GLC  NR+ EA  +F  M + G  P++ TY  LI G
Sbjct: 387 VARGLAPNVVTYTALVS-------GLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILG 439

Query: 162 FCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLE--- 218
           FC  G +   L+L  +MV        IS  ++  Y  +   LCK G   +A E+  E   
Sbjct: 440 FCSAGQVDGGLKLFGEMVCAG-----ISPDHVV-YGTLAAELCKSGRSARALEILREGRE 493

Query: 219 ----------------------------------MKGRGINPAVVVCTTLIHGFCCAGNW 244
                                             M   G  PA   C +L+ G C +G  
Sbjct: 494 SLRSEAWGDEVYRFAVDGLLEAGKMEMALGFVRDMVRGGQLPAPERCASLVAGLCKSGQG 553

Query: 245 EEVNGLFIEMLDLG 258
            E   +  E++DL 
Sbjct: 554 GEARAVLEEIMDLA 567


>gi|224130936|ref|XP_002320961.1| predicted protein [Populus trichocarpa]
 gi|222861734|gb|EEE99276.1| predicted protein [Populus trichocarpa]
          Length = 474

 Score =  264 bits (675), Expect = 9e-68,   Method: Compositional matrix adjust.
 Identities = 145/424 (34%), Positives = 242/424 (57%), Gaps = 8/424 (1%)

Query: 135 EATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIF 194
           +A   F+ M+     P ++ +  L +   R G+    + L K++        L  + +I 
Sbjct: 45  DALASFRLMLLRKPLPCIVEFSKLFSSIVRMGHYETVVYLSKEI------EFLGIEQDIH 98

Query: 195 SYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEM 254
           S SI+I+  C    VD    +  ++   G+ P++V  TTL++G C  G  ++V  L+ +M
Sbjct: 99  SLSILINCFCHLHRVDFGLSVLSKILKLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDM 158

Query: 255 LDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRI 314
           L  G +PN+ T+NV+I+ L K GK NEA G L+ M + G  P+   Y++L+DGYCL G++
Sbjct: 159 LVRGLQPNVYTYNVIINSLSKSGKANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQM 218

Query: 315 DTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTL 374
           D AR +F  M SKGC   V +Y  L+NGYCKI  +EEA+ L  + +  G+   ++T+ T+
Sbjct: 219 DEARSVFDLMVSKGCTPNVYTYTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTTI 278

Query: 375 LSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKF 434
           +SGL +AG+   AQ+LF  +  +   P++ TY +L+DGLCK+  ++EA  LF  ++ +  
Sbjct: 279 ISGLCRAGRPLAAQQLFRYICAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRSTV 338

Query: 435 EFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKAND 494
           +  + I+  LID LCK G++ +  ELF +L  +GL P V TY+ ++  LC++G + +A+ 
Sbjct: 339 KPNLVIYTILIDSLCKCGKIKDGKELFSRLIDEGLKPNVYTYTALVGALCKEGLIIEAHK 398

Query: 495 FLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDL 554
               ME++GC P+   +N ++ GFLQ+   S   +L+ +M    R    D  T +++ D 
Sbjct: 399 LFRKMEEDGCTPDKCAYNVIIQGFLQHKDPSMARQLVEEMV--NRGFSADAATRALLNDF 456

Query: 555 LAKD 558
              D
Sbjct: 457 PTND 460



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 119/423 (28%), Positives = 224/423 (52%), Gaps = 13/423 (3%)

Query: 57  NEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNIL 116
           ++A   F  M   +P P I  F+ LF ++ +  HY+ V+   +++  +G+  D  +L+IL
Sbjct: 44  DDALASFRLMLLRKPLPCIVEFSKLFSSIVRMGHYETVVYLSKEIEFLGIEQDIHSLSIL 103

Query: 117 INCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHK 176
           INCF       C  +R+     +   ++  G+ P ++T+ TL+NG C  G +   + L+ 
Sbjct: 104 INCF-------CHLHRVDFGLSVLSKILKLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYD 156

Query: 177 KMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIH 236
            M+      GL  + N+++Y++II+SL K G  ++A     +M+  G  P VV  +TLI 
Sbjct: 157 DMLV----RGL--QPNVYTYNVIINSLSKSGKANEALGFLKQMEKVGCVPNVVNYSTLID 210

Query: 237 GFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNP 296
           G+C  G  +E   +F  M+  G  PN+ T+  +++  CK  +I EA  LL+  +++GL P
Sbjct: 211 GYCLRGQMDEARSVFDLMVSKGCTPNVYTYTSLMNGYCKIERIEEAVQLLDETLRKGLVP 270

Query: 297 DRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLY 356
           D  T+ +++ G C  GR   A+++F  + + G    +++Y +L++G CK  N+EEA +L+
Sbjct: 271 DIVTFTTIISGLCRAGRPLAAQQLFRYICAHGHTPNIMTYGVLLDGLCKHGNLEEAFALF 330

Query: 357 RQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKN 416
           +++  + V+  ++ Y  L+  L + G+    ++LF  +    ++P++ TY  L+  LCK 
Sbjct: 331 QEMQRSTVKPNLVIYTILIDSLCKCGKIKDGKELFSRLIDEGLKPNVYTYTALVGALCKE 390

Query: 417 NCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTY 476
             + EA KLF  +E +        +N +I G  +      A +L  ++  +G      T 
Sbjct: 391 GLIIEAHKLFRKMEEDGCTPDKCAYNVIIQGFLQHKDPSMARQLVEEMVNRGFSADAATR 450

Query: 477 SIM 479
           +++
Sbjct: 451 ALL 453



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 99/349 (28%), Positives = 173/349 (49%), Gaps = 2/349 (0%)

Query: 210 DKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVM 269
           D A   F  M  R   P +V  + L       G++E V  L  E+  LG   ++ + +++
Sbjct: 44  DDALASFRLMLLRKPLPCIVEFSKLFSSIVRMGHYETVVYLSKEIEFLGIEQDIHSLSIL 103

Query: 270 IDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGC 329
           I+C C   +++    +L  +++ GL P   T+ +L++G C+ G++D    ++  M  +G 
Sbjct: 104 INCFCHLHRVDFGLSVLSKILKLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLVRGL 163

Query: 330 KHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQK 389
           +  V +YN++IN   K     EA+   +Q+   G    V+ Y+TL+ G    GQ   A+ 
Sbjct: 164 QPNVYTYNVIINSLSKSGKANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDEARS 223

Query: 390 LFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLC 449
           +FD M      P++ TY  L++G CK   ++EAV+L            I  F  +I GLC
Sbjct: 224 VFDLMVSKGCTPNVYTYTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTTIISGLC 283

Query: 450 KAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVV 509
           +AGR   A +LF  +   G  P ++TY +++ GLC+ G LE+A      M+++   PN+V
Sbjct: 284 RAGRPLAAQQLFRYICAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRSTVKPNLV 343

Query: 510 TFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKD 558
            +  L+    +  K     EL  ++   +  L P+  T++ +V  L K+
Sbjct: 344 IYTILIDSLCKCGKIKDGKELFSRLI--DEGLKPNVYTYTALVGALCKE 390



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 77/252 (30%), Positives = 119/252 (47%), Gaps = 13/252 (5%)

Query: 55  NLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLN 114
            ++EAR  F  M     +P + ++  L     K    +  +    + +  GL+PD +T  
Sbjct: 217 QMDEARSVFDLMVSKGCTPNVYTYTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFT 276

Query: 115 ILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRL 174
            +I+       GLC   R   A  LF+ + A G  P+++TYG L++G C+ GNL  A  L
Sbjct: 277 TIIS-------GLCRAGRPLAAQQLFRYICAHGHTPNIMTYGVLLDGLCKHGNLEEAFAL 329

Query: 175 HKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTL 234
            ++M           K N+  Y+I+IDSLCK G +   KELF  +   G+ P V   T L
Sbjct: 330 FQEMQRSTV------KPNLVIYTILIDSLCKCGKIKDGKELFSRLIDEGLKPNVYTYTAL 383

Query: 235 IHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGL 294
           +   C  G   E + LF +M + G  P+   +NV+I    +    + A  L+E M+ RG 
Sbjct: 384 VGALCKEGLIIEAHKLFRKMEEDGCTPDKCAYNVIIQGFLQHKDPSMARQLVEEMVNRGF 443

Query: 295 NPDRFTYNSLMD 306
           + D  T   L D
Sbjct: 444 SADAATRALLND 455


>gi|357139998|ref|XP_003571561.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 807

 Score =  264 bits (674), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 167/572 (29%), Positives = 285/572 (49%), Gaps = 71/572 (12%)

Query: 55  NLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLN 114
            + EA   F  MT     P + ++N +  A+ K R  D      R++V  G+ PD +T N
Sbjct: 226 KVGEACDLFHEMTQQGVPPNVVTYNSVIHALCKARAVDKAQGILRQMVGNGVQPDNVTYN 285

Query: 115 ILINCFGN--------------KERG--------------LCVENRIKEATWLFKNMIAF 146
            LI+ +                  RG              LC   RI+EA   F +M+A 
Sbjct: 286 TLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTFVAFLCKHGRIEEAREFFDSMLAK 345

Query: 147 GVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKE 206
           G + ++I+Y TL++G+   G L     L   MV     +G++   ++F+  I+++   K 
Sbjct: 346 GHKLNIISYSTLLHGYATAGCLVDMSNLFNLMV----RDGIVPNQHVFN--ILVNGYAKC 399

Query: 207 GLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPN---- 262
           G+V +A  +F +M+ RG+NP V+    +IH FC  G+ ++    F  M+D G  PN    
Sbjct: 400 GMVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMIDKGVEPNFAVY 459

Query: 263 -------------------------------LLTFNVMIDCLCKGGKINEANGLLELMIQ 291
                                          +L+F  +I+ LCK G++ EA  + +++I+
Sbjct: 460 QCLIQGFCTHGDLVKAEELVYEIRNKGLGPCILSFASLINHLCKEGRVFEAQRIFDMIIR 519

Query: 292 RGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEE 351
            G   D   + SL+DGYCL+G++  A  +  +M S G +  +V+Y  L+NG CK   +++
Sbjct: 520 TGEKADVNIFTSLIDGYCLIGKMSEAFRVHDAMVSVGIEPDIVTYGTLVNGCCKNGRIDD 579

Query: 352 AMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILID 411
            + L+R+++  GV+ T  TY  +L GLF AG+   A+++F EM    +   + TY+IL+ 
Sbjct: 580 GLILFRELLHKGVKPTTFTYGIILDGLFHAGRTAAAKEMFQEMIESGIAVTIPTYSILLT 639

Query: 412 GLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVP 471
           GLC+NNC +EA+ +F  L     +F I I N +I  + KA R + A  LF  +P  GLVP
Sbjct: 640 GLCRNNCTEEAITVFQKLCAMNVKFDIVILNIMISKMFKARRREEAEGLFASIPDYGLVP 699

Query: 472 TVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELL 531
           TV TY+IM+  L ++G +E+A      M K+G +P     N ++   L+  +  K    +
Sbjct: 700 TVQTYTIMMENLIKEGSVEEAEGVFSVMLKSGLSPTSHFINVIVRTLLEKGEIVKAGIYM 759

Query: 532 HKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
            ++    ++++ + +T S+++ L +   K+ E
Sbjct: 760 CRV--DGKSILFEASTASMLLSLFSCKGKHRE 789



 Score =  209 bits (531), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 143/562 (25%), Positives = 240/562 (42%), Gaps = 76/562 (13%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
           P + ++++L     + R  D   +F+  L+  G+  D + ++ L+       RGLC   R
Sbjct: 101 PTVYTYSILIDCCCRARRLDLAFAFFGCLLRQGMKADVIVVSSLL-------RGLCDAKR 153

Query: 133 IKEAT-WLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRL----------------- 174
             EA   LF  M   G  PD I+Y T++   C  G    AL +                 
Sbjct: 154 TDEAVDVLFHRMPELGCVPDAISYSTVLKSVCDDGRSQWALDILRMAVKQGGGCPCNVVV 213

Query: 175 HKKMVSGDYENGLISKT--------------NIFSYSIIIDSLCKEGLVDKAKELFLEMK 220
           +  +V G ++ G + +               N+ +Y+ +I +LCK   VDKA+ +  +M 
Sbjct: 214 YSTVVHGLFKEGKVGEACDLFHEMTQQGVPPNVVTYNSVIHALCKARAVDKAQGILRQMV 273

Query: 221 GRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKIN 280
           G G+ P  V   TLIHG+   G W++   +F EM   G  PN +T +  +  LCK G+I 
Sbjct: 274 GNGVQPDNVTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTFVAFLCKHGRIE 333

Query: 281 EANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILI 340
           EA    + M+ +G   +  +Y++L+ GY   G +     +F  M   G       +NIL+
Sbjct: 334 EAREFFDSMLAKGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMVRDGIVPNQHVFNILV 393

Query: 341 NGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVE 400
           NGY K   V EAM ++  +   G+   V+TY  ++    + G    A   F+ M    VE
Sbjct: 394 NGYAKCGMVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMIDKGVE 453

Query: 401 PDLSTYNILIDG-----------------------------------LCKNNCVQEAVKL 425
           P+ + Y  LI G                                   LCK   V EA ++
Sbjct: 454 PNFAVYQCLIQGFCTHGDLVKAEELVYEIRNKGLGPCILSFASLINHLCKEGRVFEAQRI 513

Query: 426 FHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCR 485
           F M+     +  + IF  LIDG C  G++  A+ +   +   G+ P +VTY  +++G C+
Sbjct: 514 FDMIIRTGEKADVNIFTSLIDGYCLIGKMSEAFRVHDAMVSVGIEPDIVTYGTLVNGCCK 573

Query: 486 KGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDD 545
            G+++        +   G  P   T+  ++ G     +T+   E+  +M E    +    
Sbjct: 574 NGRIDDGLILFRELLHKGVKPTTFTYGIILDGLFHAGRTAAAKEMFQEMIES--GIAVTI 631

Query: 546 TTFSIVVDLLAKDEKYHECSAV 567
            T+SI++  L ++    E   V
Sbjct: 632 PTYSILLTGLCRNNCTEEAITV 653



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 116/437 (26%), Positives = 214/437 (48%), Gaps = 42/437 (9%)

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
           ++A+ L  +M +G      ++   +++YSI+ID  C+   +D A   F  +  +G+   V
Sbjct: 81  ALAVALFNRMSTGTGPR--VALPTVYTYSILIDCCCRARRLDLAFAFFGCLLRQGMKADV 138

Query: 229 VVCTTLIHGFCCAGNWEE-VNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLE 287
           +V ++L+ G C A   +E V+ LF  M +LG  P+ ++++ ++  +C  G+   A  +L 
Sbjct: 139 IVVSSLLRGLCDAKRTDEAVDVLFHRMPELGCVPDAISYSTVLKSVCDDGRSQWALDILR 198

Query: 288 LMIQR--GLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCK 345
           + +++  G   +   Y++++ G    G++  A ++F  M  +G    VV+YN +I+  CK
Sbjct: 199 MAVKQGGGCPCNVVVYSTVVHGLFKEGKVGEACDLFHEMTQQGVPPNVVTYNSVIHALCK 258

Query: 346 ILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLST 405
              V++A  + RQ++ NGV+   +TYNTL+ G    GQ   A ++F EM    V P+  T
Sbjct: 259 ARAVDKAQGILRQMVGNGVQPDNVTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVT 318

Query: 406 YNILIDGLCKNNCVQEAVKLF-------HMLEM--------------------NKFEFGI 438
            +  +  LCK+  ++EA + F       H L +                    N F   +
Sbjct: 319 CSTFVAFLCKHGRIEEAREFFDSMLAKGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMV 378

Query: 439 E--------IFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLE 490
                    +FN L++G  K G +  A  +F  + ++GL P V+TY  +IH  CR G ++
Sbjct: 379 RDGIVPNQHVFNILVNGYAKCGMVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMD 438

Query: 491 KANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSI 550
            A D   +M   G  PN   +  L+ GF  +    K  EL++++    + L P   +F+ 
Sbjct: 439 DAMDKFNHMIDKGVEPNFAVYQCLIQGFCTHGDLVKAEELVYEIR--NKGLGPCILSFAS 496

Query: 551 VVDLLAKDEKYHECSAV 567
           +++ L K+ +  E   +
Sbjct: 497 LINHLCKEGRVFEAQRI 513


>gi|224134148|ref|XP_002321748.1| predicted protein [Populus trichocarpa]
 gi|222868744|gb|EEF05875.1| predicted protein [Populus trichocarpa]
          Length = 1041

 Score =  263 bits (673), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 168/541 (31%), Positives = 267/541 (49%), Gaps = 45/541 (8%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CK G  ++ +A      M  +   P   ++N +     K ++   V     ++    L+P
Sbjct: 387 CKFG--DMEKADALLNEMIMVGIKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKSNLVP 444

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
              T  ++IN       GLC    I++A+ +F+ M++ GV+P+ + Y TLI G  + G  
Sbjct: 445 TAYTCGMIIN-------GLCRHGSIEDASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRF 497

Query: 169 SVALRLHKKM--------------------------VSGDY-----ENGLISKTNIFSYS 197
             A+R+ K M                           + DY     E GL  K N+++Y 
Sbjct: 498 QEAVRILKVMDKKGVQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGL--KPNVYTYG 555

Query: 198 IIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDL 257
            +I   CK G +  A   F EM G GI P  VVCT LI G+C  G+  E   +F  ML  
Sbjct: 556 ALIHGYCKSGEMQVADRYFKEMLGCGIAPNDVVCTALIDGYCKEGSTTEATSIFRCMLGR 615

Query: 258 GPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTA 317
              P++ T++ +I  L + GK+  A  LL   +++GL PD FTYNS++ G+C  G I  A
Sbjct: 616 SVHPDVRTYSALIHGLLRNGKLQGAMELLSEFLEKGLVPDVFTYNSIISGFCKQGGIGKA 675

Query: 318 REIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSG 377
            ++   M  KG    +++YN LING CK   +E A  L+  I   G+    +TY T++ G
Sbjct: 676 FQLHEYMCQKGISPNIITYNALINGLCKAGEIERARELFDGIPGKGLAHNAVTYATIIDG 735

Query: 378 LFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFG 437
             ++G    A +LFDEM L  V PD   Y+ LIDG  K    ++A+ LF +  + K    
Sbjct: 736 YCKSGNLSKAFRLFDEMTLKGVPPDSFVYSALIDGCRKEGNTEKALSLF-LESVQKGFAS 794

Query: 438 IEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLL 497
               N L+DG CK+G++  A +L   +  K + P  VTY+I+I   C+ G L++A  F +
Sbjct: 795 TSSLNALMDGFCKSGKVIEANQLLEDMVDKHVKPDHVTYTILIDYHCKTGFLKEAEQFFV 854

Query: 498 YMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAK 557
            M+K    PN +T+  L+ G+    + S++  L  +M    +++ PD  T+S+++D   K
Sbjct: 855 DMQKRNLMPNALTYTALLSGYNMAGRRSEMFALFDEMI--AKDIEPDGVTWSVMIDAHLK 912

Query: 558 D 558
           +
Sbjct: 913 E 913



 Score =  249 bits (636), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 149/499 (29%), Positives = 248/499 (49%), Gaps = 15/499 (3%)

Query: 55  NLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLN 114
           N  E +     M     SP + ++N++ G + +    D      + +   GL+ D  T +
Sbjct: 251 NAKEGKRLLFEMEEKGCSPSLVTYNVVIGGLCRAGEVDEAFELKKLMDKKGLVADVFTYS 310

Query: 115 ILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRL 174
           ILI+ FG ++R  C      EA  + + M + G++P  + Y  LI+GF R G+   A R+
Sbjct: 311 ILIDGFGKQKR--CT-----EAKLMLEEMFSKGLKPGHVAYTALIDGFMRQGDSGEAFRV 363

Query: 175 HKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTL 234
            ++M++     G+  K N+F+Y+ ++  +CK G ++KA  L  EM   GI P       +
Sbjct: 364 KEEMLA----RGV--KLNLFTYNALVKGVCKFGDMEKADALLNEMIMVGIKPDTQTYNNM 417

Query: 235 IHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGL 294
           I G+    N   V  L  EM      P   T  ++I+ LC+ G I +A+ + E+M+  G+
Sbjct: 418 IEGYLKEQNTSRVKDLLSEMKKSNLVPTAYTCGMIINGLCRHGSIEDASRVFEIMVSLGV 477

Query: 295 NPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMS 354
            P+   Y +L+ G+   GR   A  I   M  KG +  V+ YN +I G CK   +EEA  
Sbjct: 478 KPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVIIGLCKSRKMEEAKD 537

Query: 355 LYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLC 414
              ++I  G++  V TY  L+ G  ++G+   A + F EM    + P+      LIDG C
Sbjct: 538 YLVEMIERGLKPNVYTYGALIHGYCKSGEMQVADRYFKEMLGCGIAPNDVVCTALIDGYC 597

Query: 415 KNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVV 474
           K     EA  +F  +        +  ++ LI GL + G+L  A EL  +  +KGLVP V 
Sbjct: 598 KEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSEFLEKGLVPDVF 657

Query: 475 TYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKM 534
           TY+ +I G C++G + KA     YM + G +PN++T+N L++G  +  +  +  EL   +
Sbjct: 658 TYNSIISGFCKQGGIGKAFQLHEYMCQKGISPNIITYNALINGLCKAGEIERARELFDGI 717

Query: 535 AEPERNLVPDDTTFSIVVD 553
             P + L  +  T++ ++D
Sbjct: 718 --PGKGLAHNAVTYATIID 734



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 160/559 (28%), Positives = 254/559 (45%), Gaps = 51/559 (9%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           C+ G  ++ +A   F  M  +   P    +  L     +   +   +   + +   G+ P
Sbjct: 457 CRHG--SIEDASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQP 514

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           D L  N +I        GLC   +++EA      MI  G++P+V TYG LI+G+C++G +
Sbjct: 515 DVLCYNSVI-------IGLCKSRKMEEAKDYLVEMIERGLKPNVYTYGALIHGYCKSGEM 567

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
            VA R  K+M+      G     N    + +ID  CKEG   +A  +F  M GR ++P V
Sbjct: 568 QVADRYFKEML------GCGIAPNDVVCTALIDGYCKEGSTTEATSIFRCMLGRSVHPDV 621

Query: 229 VVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLEL 288
              + LIHG    G  +    L  E L+ G  P++ T+N +I   CK G I +A  L E 
Sbjct: 622 RTYSALIHGLLRNGKLQGAMELLSEFLEKGLVPDVFTYNSIISGFCKQGGIGKAFQLHEY 681

Query: 289 MIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILN 348
           M Q+G++P+  TYN+L++G C  G I+ ARE+F  +  KG  H  V+Y  +I+GYCK  N
Sbjct: 682 MCQKGISPNIITYNALINGLCKAGEIERARELFDGIPGKGLAHNAVTYATIIDGYCKSGN 741

Query: 349 VEEAMSLYRQIISNGVRQTVITY----------------------------------NTL 374
           + +A  L+ ++   GV      Y                                  N L
Sbjct: 742 LSKAFRLFDEMTLKGVPPDSFVYSALIDGCRKEGNTEKALSLFLESVQKGFASTSSLNAL 801

Query: 375 LSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKF 434
           + G  ++G+   A +L ++M   +V+PD  TY ILID  CK   ++EA + F  ++    
Sbjct: 802 MDGFCKSGKVIEANQLLEDMVDKHVKPDHVTYTILIDYHCKTGFLKEAEQFFVDMQKRNL 861

Query: 435 EFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKAND 494
                 +  L+ G   AGR    + LF ++  K + P  VT+S+MI    ++G   K   
Sbjct: 862 MPNALTYTALLSGYNMAGRRSEMFALFDEMIAKDIEPDGVTWSVMIDAHLKEGDHVKTLK 921

Query: 495 FLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDL 554
            +  M K G   +    + L+    +    S+V+++L K+ E   NL     T S +V  
Sbjct: 922 LVDDMLKKGGNVSKNVCHVLIDPLCRKEHVSEVLKVLEKIEEQGLNLSL--ATCSTLVRC 979

Query: 555 LAKDEKYHECSAVSKSSYR 573
             K  K    + V KS  R
Sbjct: 980 FHKAGKMDGAARVLKSMVR 998



 Score =  198 bits (503), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 140/521 (26%), Positives = 236/521 (45%), Gaps = 49/521 (9%)

Query: 49   CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
            CKS    + EA+ +   M      P + ++  L     K+        ++++++  G+ P
Sbjct: 527  CKSR--KMEEAKDYLVEMIERGLKPNVYTYGALIHGYCKSGEMQVADRYFKEMLGCGIAP 584

Query: 109  DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
            + +    LI+       G C E    EAT +F+ M+   V PDV TY  LI+G  R G L
Sbjct: 585  NDVVCTALID-------GYCKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKL 637

Query: 169  SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
              A+ L  + +    E GL+   ++F+Y+ II   CK+G + KA +L   M  +GI+P +
Sbjct: 638  QGAMELLSEFL----EKGLVP--DVFTYNSIISGFCKQGGIGKAFQLHEYMCQKGISPNI 691

Query: 229  VVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLEL 288
            +    LI+G C AG  E    LF  +   G   N +T+  +ID  CK G +++A  L + 
Sbjct: 692  ITYNALINGLCKAGEIERARELFDGIPGKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDE 751

Query: 289  MIQRGLNPDRFTY----------------------------------NSLMDGYCLVGRI 314
            M  +G+ PD F Y                                  N+LMDG+C  G++
Sbjct: 752  MTLKGVPPDSFVYSALIDGCRKEGNTEKALSLFLESVQKGFASTSSLNALMDGFCKSGKV 811

Query: 315  DTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTL 374
              A ++   M  K  K   V+Y ILI+ +CK   ++EA   +  +    +    +TY  L
Sbjct: 812  IEANQLLEDMVDKHVKPDHVTYTILIDYHCKTGFLKEAEQFFVDMQKRNLMPNALTYTAL 871

Query: 375  LSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKF 434
            LSG   AG+      LFDEM   ++EPD  T++++ID   K     + +KL   +     
Sbjct: 872  LSGYNMAGRRSEMFALFDEMIAKDIEPDGVTWSVMIDAHLKEGDHVKTLKLVDDMLKKGG 931

Query: 435  EFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKAND 494
                 + + LID LC+   +    ++  K+ ++GL  ++ T S ++    + GK++ A  
Sbjct: 932  NVSKNVCHVLIDPLCRKEHVSEVLKVLEKIEEQGLNLSLATCSTLVRCFHKAGKMDGAAR 991

Query: 495  FLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMA 535
             L  M +    P+    N L++    +  +    + L +MA
Sbjct: 992  VLKSMVRFKWVPDSTELNDLINVEQDSTDSENAGDFLKQMA 1032



 Score =  191 bits (486), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 139/484 (28%), Positives = 229/484 (47%), Gaps = 17/484 (3%)

Query: 78  FNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEAT 137
           F LL     K   +D  +SF+      G +   L  N L++        L   N++ E  
Sbjct: 169 FELLIDGYKKKGLFDEAVSFFLGAKRNGFVVGLLCCNGLLS-------DLLKANKL-ELF 220

Query: 138 WLFKN-MIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSY 196
           W F N M+   V  DV TY  LIN   R GN     RL  +M     E G     ++ +Y
Sbjct: 221 WRFYNGMLEANVLHDVYTYTHLINAHFRAGNAKEGKRLLFEM----EEKG--CSPSLVTY 274

Query: 197 SIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLD 256
           +++I  LC+ G VD+A EL   M  +G+   V   + LI GF       E   +  EM  
Sbjct: 275 NVVIGGLCRAGEVDEAFELKKLMDKKGLVADVFTYSILIDGFGKQKRCTEAKLMLEEMFS 334

Query: 257 LGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDT 316
            G +P  + +  +ID   + G   EA  + E M+ RG+  + FTYN+L+ G C  G ++ 
Sbjct: 335 KGLKPGHVAYTALIDGFMRQGDSGEAFRVKEEMLARGVKLNLFTYNALVKGVCKFGDMEK 394

Query: 317 AREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLS 376
           A  +   M   G K    +YN +I GY K  N      L  ++  + +  T  T   +++
Sbjct: 395 ADALLNEMIMVGIKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKSNLVPTAYTCGMIIN 454

Query: 377 GLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEF 436
           GL + G    A ++F+ M    V+P+   Y  LI G  +    QEAV++  +++    + 
Sbjct: 455 GLCRHGSIEDASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQP 514

Query: 437 GIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFL 496
            +  +N +I GLCK+ +++ A +   ++ ++GL P V TY  +IHG C+ G+++ A+ + 
Sbjct: 515 DVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGLKPNVYTYGALIHGYCKSGEMQVADRYF 574

Query: 497 LYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLA 556
             M   G APN V    L+ G+ +   T++   +   M    R++ PD  T+S ++  L 
Sbjct: 575 KEMLGCGIAPNDVVCTALIDGYCKEGSTTEATSIFRCML--GRSVHPDVRTYSALIHGLL 632

Query: 557 KDEK 560
           ++ K
Sbjct: 633 RNGK 636



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 116/420 (27%), Positives = 214/420 (50%), Gaps = 10/420 (2%)

Query: 156 GTLINGF-----CRTGNLSVALRLHKKMVSGDYENGLISKT---NIFSYSIIIDSLCKEG 207
           G   NGF     C  G LS  L+ +K  +   + NG++      ++++Y+ +I++  + G
Sbjct: 191 GAKRNGFVVGLLCCNGLLSDLLKANKLELFWRFYNGMLEANVLHDVYTYTHLINAHFRAG 250

Query: 208 LVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFN 267
              + K L  EM+ +G +P++V    +I G C AG  +E   L   M   G   ++ T++
Sbjct: 251 NAKEGKRLLFEMEEKGCSPSLVTYNVVIGGLCRAGEVDEAFELKKLMDKKGLVADVFTYS 310

Query: 268 VMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSK 327
           ++ID   K  +  EA  +LE M  +GL P    Y +L+DG+   G    A  +   M ++
Sbjct: 311 ILIDGFGKQKRCTEAKLMLEEMFSKGLKPGHVAYTALIDGFMRQGDSGEAFRVKEEMLAR 370

Query: 328 GCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYA 387
           G K  + +YN L+ G CK  ++E+A +L  ++I  G++    TYN ++ G  +       
Sbjct: 371 GVKLNLFTYNALVKGVCKFGDMEKADALLNEMIMVGIKPDTQTYNNMIEGYLKEQNTSRV 430

Query: 388 QKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDG 447
           + L  EMK  N+ P   T  ++I+GLC++  +++A ++F ++     +    I+  LI G
Sbjct: 431 KDLLSEMKKSNLVPTAYTCGMIINGLCRHGSIEDASRVFEIMVSLGVKPNAVIYTTLIKG 490

Query: 448 LCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPN 507
             + GR   A  +   + +KG+ P V+ Y+ +I GLC+  K+E+A D+L+ M + G  PN
Sbjct: 491 HVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGLKPN 550

Query: 508 VVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAV 567
           V T+  L+HG+ ++ +         +M      + P+D   + ++D   K+    E +++
Sbjct: 551 VYTYGALIHGYCKSGEMQVADRYFKEMLGC--GIAPNDVVCTALIDGYCKEGSTTEATSI 608


>gi|125572252|gb|EAZ13767.1| hypothetical protein OsJ_03693 [Oryza sativa Japonica Group]
          Length = 715

 Score =  263 bits (672), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 145/487 (29%), Positives = 252/487 (51%), Gaps = 21/487 (4%)

Query: 77  SFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEA 136
           ++N L     +    DA     R + S+ + PD  T   +I       RGLC   R+ EA
Sbjct: 146 AYNTLVAGYCRYGQLDAA---RRLIASMPVAPDAYTYTPII-------RGLCDRGRVGEA 195

Query: 137 TWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSY 196
             L  +M+  G +P V+TY  L+   C++     A+ +  +M +           NI +Y
Sbjct: 196 LSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKG------CTPNIVTY 249

Query: 197 SIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLD 256
           ++II+ +C+EG VD A+E    +   G  P  V  TT++ G C A  WE+V  LF EM++
Sbjct: 250 NVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMME 309

Query: 257 LGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDT 316
               PN +TF++++   C+GG +  A  +LE M   G   +    N +++  C  GR+D 
Sbjct: 310 KNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDD 369

Query: 317 AREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLS 376
           A +   +M S GC    +SY  ++ G C+    E+A  L ++++        +T+NT + 
Sbjct: 370 AFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFIC 429

Query: 377 GLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEF 436
            L Q G    A  L ++M  +  E ++ TYN L++G C    V  A++LF+ +       
Sbjct: 430 ILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCKPNTI 489

Query: 437 GIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFL 496
               +  L+ GLC A RLD A EL  ++ QK   P VVT+++++   C+KG +++A + +
Sbjct: 490 ---TYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELV 546

Query: 497 LYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLA 556
             M ++GC PN++T+NTL+ G  ++  + + +ELLH +      + PD  T+S ++ +L+
Sbjct: 547 EQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLV--SNGVSPDIVTYSSIIGVLS 604

Query: 557 KDEKYHE 563
           ++++  E
Sbjct: 605 REDRVEE 611



 Score =  249 bits (636), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 148/507 (29%), Positives = 256/507 (50%), Gaps = 29/507 (5%)

Query: 41  LNEFLHENCKSGIIN-------------LNEARYFFGYMTHMQPSPPISSFNLLFGAVAK 87
           L++ LH  C+  ++                +A      M     +P I ++N++   + +
Sbjct: 199 LDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCR 258

Query: 88  NRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFG 147
               D    F  +L S G  PD ++   ++       +GLC   R ++   LF  M+   
Sbjct: 259 EGRVDDAREFLNRLSSYGFQPDTVSYTTVL-------KGLCAAKRWEDVEELFAEMMEKN 311

Query: 148 VRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEG 207
             P+ +T+  L+  FCR G +  A+++ ++M SG   +G  + T + +  I+I+++CK+G
Sbjct: 312 CMPNEVTFDMLVRFFCRGGMVERAIQVLEQM-SG---HGCAANTTLCN--IVINTICKQG 365

Query: 208 LVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFN 267
            VD A +    M   G +P  +  TT++ G C A  WE+   L  EM+     PN +TFN
Sbjct: 366 RVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFN 425

Query: 268 VMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSK 327
             I  LC+ G I +A  L+E M + G   +  TYN+L++G+C+ GR+D+A E+F SM   
Sbjct: 426 TFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMP-- 483

Query: 328 GCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYA 387
            CK   ++Y  L+ G C    ++ A  L  +++       V+T+N L+S   Q G    A
Sbjct: 484 -CKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEA 542

Query: 388 QKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDG 447
            +L ++M  +   P+L TYN L+DG+ K+   +EA++L H L  N     I  ++ +I  
Sbjct: 543 IELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGV 602

Query: 448 LCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPN 507
           L +  R++ A ++FH +   G+ P  V Y+ ++  LC++   + A DF  YM  NGC PN
Sbjct: 603 LSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPN 662

Query: 508 VVTFNTLMHGFLQNNKTSKVVELLHKM 534
            +T+ TL+ G    +   +  +LL ++
Sbjct: 663 ELTYITLIEGLANEDFLKETRDLLREL 689



 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 146/494 (29%), Positives = 228/494 (46%), Gaps = 56/494 (11%)

Query: 100 KLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLI 159
           +  S G  PD      LI       R LC   R  +A  + +     G   DV  Y TL+
Sbjct: 99  RATSRGEAPDVYLCTKLI-------RNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLV 151

Query: 160 NGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEM 219
            G+CR G L  A RL   M             + ++Y+ II  LC  G V +A  L  +M
Sbjct: 152 AGYCRYGQLDAARRLIASMPVA---------PDAYTYTPIIRGLCDRGRVGEALSLLDDM 202

Query: 220 KGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKI 279
             RG  P+VV  T L+   C +  + +   +  EM   G  PN++T+NV+I+ +C+ G++
Sbjct: 203 LHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRV 262

Query: 280 NEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSY--- 336
           ++A   L  +   G  PD  +Y +++ G C   R +   E+F  M  K C    V++   
Sbjct: 263 DDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDML 322

Query: 337 --------------------------------NILINGYCKILNVEEAMSLYRQIISNGV 364
                                           NI+IN  CK   V++A      + S G 
Sbjct: 323 VRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGC 382

Query: 365 RQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVK 424
               I+Y T+L GL +A +   A++L  EM   N  P+  T+N  I  LC+   +++A  
Sbjct: 383 SPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATM 442

Query: 425 LFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLC 484
           L   +  +  E  I  +N L++G C  GR+D+A ELF+ +P K   P  +TY+ ++ GLC
Sbjct: 443 LIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCK---PNTITYTTLLTGLC 499

Query: 485 RKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPD 544
              +L+ A + L  M +  CAPNVVTFN L+  F Q     + +EL+ +M   E    P+
Sbjct: 500 NAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMM--EHGCTPN 557

Query: 545 DTTFSIVVDLLAKD 558
             T++ ++D + KD
Sbjct: 558 LITYNTLLDGITKD 571



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 100/358 (27%), Positives = 168/358 (46%), Gaps = 32/358 (8%)

Query: 211 KAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWE---------EVNGLFIEM------- 254
           +A  L      RG  P V +CT LI   C  G            E +G  +++       
Sbjct: 92  RAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLV 151

Query: 255 --------LDLGPR--------PNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDR 298
                   LD   R        P+  T+  +I  LC  G++ EA  LL+ M+ RG  P  
Sbjct: 152 AGYCRYGQLDAARRLIASMPVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSV 211

Query: 299 FTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQ 358
            TY  L++  C       A E+   M +KGC   +V+YN++ING C+   V++A     +
Sbjct: 212 VTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNR 271

Query: 359 IISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNC 418
           + S G +   ++Y T+L GL  A +    ++LF EM   N  P+  T+++L+   C+   
Sbjct: 272 LSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGM 331

Query: 419 VQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSI 478
           V+ A+++   +  +       + N +I+ +CK GR+D+A++  + +   G  P  ++Y+ 
Sbjct: 332 VERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTT 391

Query: 479 MIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAE 536
           ++ GLCR  + E A + L  M +  C PN VTFNT +    Q     +   L+ +M+E
Sbjct: 392 VLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSE 449



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 88/316 (27%), Positives = 159/316 (50%), Gaps = 5/316 (1%)

Query: 258 GPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTA 317
           G  P++     +I  LC+ G+ ++A  +L    + G   D F YN+L+ GYC  G++D A
Sbjct: 104 GEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAA 163

Query: 318 REIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSG 377
           R +  SM      +T   Y  +I G C    V EA+SL   ++  G + +V+TY  LL  
Sbjct: 164 RRLIASMPVAPDAYT---YTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEA 220

Query: 378 LFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFG 437
           + ++   G A ++ DEM+     P++ TYN++I+G+C+   V +A +  + L    F+  
Sbjct: 221 VCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPD 280

Query: 438 IEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLL 497
              +  ++ GLC A R ++  ELF ++ +K  +P  VT+ +++   CR G +E+A   L 
Sbjct: 281 TVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLE 340

Query: 498 YMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAK 557
            M  +GCA N    N +++   +  +     + L+ M        PD  +++ V+  L +
Sbjct: 341 QMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMG--SYGCSPDTISYTTVLKGLCR 398

Query: 558 DEKYHECSAVSKSSYR 573
            E++ +   + K   R
Sbjct: 399 AERWEDAKELLKEMVR 414



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 84/342 (24%), Positives = 153/342 (44%), Gaps = 35/342 (10%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CK G   +++A  F   M     SP   S+  +   + +   ++      +++V     P
Sbjct: 362 CKQG--RVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPP 419

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           + +T N  I C       LC +  I++AT L + M   G   +++TY  L+NGFC  G +
Sbjct: 420 NEVTFNTFI-CI------LCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRV 472

Query: 169 SVALRL------------HKKMVSG-------DYENGLISK-------TNIFSYSIIIDS 202
             AL L            +  +++G       D    L+++        N+ ++++++  
Sbjct: 473 DSALELFYSMPCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSF 532

Query: 203 LCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPN 262
            C++GL+D+A EL  +M   G  P ++   TL+ G     N EE   L   ++  G  P+
Sbjct: 533 FCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPD 592

Query: 263 LLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFL 322
           ++T++ +I  L +  ++ EA  +  ++   G+ P    YN ++   C     D A + F 
Sbjct: 593 IVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFA 652

Query: 323 SMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGV 364
            M S GC    ++Y  LI G      ++E   L R++ S GV
Sbjct: 653 YMVSNGCMPNELTYITLIEGLANEDFLKETRDLLRELCSRGV 694



 Score = 82.4 bits (202), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 45/183 (24%), Positives = 88/183 (48%), Gaps = 5/183 (2%)

Query: 381 AGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEI 440
           A  +  A +L D        PD+     LI  LC+     +A ++    E +     +  
Sbjct: 87  ATTSPRAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFA 146

Query: 441 FNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYME 500
           +N L+ G C+ G+LD A  L   +P   + P   TY+ +I GLC +G++ +A   L  M 
Sbjct: 147 YNTLVAGYCRYGQLDAARRLIASMP---VAPDAYTYTPIIRGLCDRGRVGEALSLLDDML 203

Query: 501 KNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEK 560
             GC P+VVT+  L+    ++    + +E+L +M    +   P+  T++++++ + ++ +
Sbjct: 204 HRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMR--AKGCTPNIVTYNVIINGMCREGR 261

Query: 561 YHE 563
             +
Sbjct: 262 VDD 264



 Score = 47.0 bits (110), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 33/129 (25%), Positives = 56/129 (43%), Gaps = 12/129 (9%)

Query: 457 AWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMH 516
           A  L  +   +G  P V   + +I  LCR+G+   A   L   E++G A +V  +NTL+ 
Sbjct: 93  AARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVA 152

Query: 517 GFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHEC-SAVSKSSYRAC 575
           G+ +  +      L+  M      + PD  T++ ++  L    +  E  S +    +R C
Sbjct: 153 GYCRYGQLDAARRLIASMP-----VAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGC 207

Query: 576 LYVTIFQPS 584
                 QPS
Sbjct: 208 ------QPS 210


>gi|357477565|ref|XP_003609068.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
 gi|355510123|gb|AES91265.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
          Length = 932

 Score =  263 bits (672), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 160/512 (31%), Positives = 259/512 (50%), Gaps = 16/512 (3%)

Query: 57  NEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNIL 116
           + AR  F  M      P +++FN L  A+ K          + K++  G+ P+  T NI 
Sbjct: 277 DRARELFDEMLECCLCPDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIF 336

Query: 117 INCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHK 176
           I       +GLC E  +  A  L   +   G+RPDV+TY T+I G CR   +  A     
Sbjct: 337 I-------QGLCKEGSLDRAVRLLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLH 389

Query: 177 KMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIH 236
           KMV+G +E       N F+Y+ IID  CK+G+V  A  +  +   +G  P      +L++
Sbjct: 390 KMVNGGFE------PNDFTYNSIIDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVN 443

Query: 237 GFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNP 296
           GFC  G+ ++   +F + L  G RP+++ +N +I  LC+ G I  A  L+  M ++G  P
Sbjct: 444 GFCQDGDPDQAMAVFKDGLGKGLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKP 503

Query: 297 DRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLY 356
           D +TYN +++G C +G +  A  +     +KGC   + +YN L++GYC+ L ++ A+ L 
Sbjct: 504 DIWTYNLIINGLCKMGCLSDANHLIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIELV 563

Query: 357 RQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKN 416
            ++ S G+   VITYNTLL+GL +  ++    ++F  M      P++ TYN +I+ LC +
Sbjct: 564 NRMWSQGMTPDVITYNTLLNGLCKTAKSEEVMEIFKAMTEKGCAPNIITYNTIIESLCNS 623

Query: 417 NCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKL-PQKGLVPTVVT 475
             V EAV L   ++       +  F  LI G CK G LD A+ LF  +  Q  +  T  T
Sbjct: 624 KKVNEAVDLLGEMKSKGLTPDVVSFGTLITGFCKVGDLDGAYGLFRGMEKQYDVSHTTAT 683

Query: 476 YSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMA 535
           Y+I+I     +  ++ A      M+KNGC P+  T+  L+ GF +    ++  + L  + 
Sbjct: 684 YNIIISAFSEQLNMKMALRLFSEMKKNGCDPDNYTYRVLIDGFCKTGNVNQGYKFL--LE 741

Query: 536 EPERNLVPDDTTFSIVVDLLAKDEKYHECSAV 567
             E+  +P  TTF  V++ L  + K  E   +
Sbjct: 742 NIEKGFIPSLTTFGRVLNCLCVEHKVQEAVGI 773



 Score =  253 bits (646), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 157/525 (29%), Positives = 264/525 (50%), Gaps = 23/525 (4%)

Query: 39  TQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFY 98
           T  N+ +H  CK G +   E+   F  +      P + +FN+    + K    D  +   
Sbjct: 296 TTFNKLVHALCKKGFVL--ESERLFDKVLKRGVCPNLFTFNIFIQGLCKEGSLDRAVRLL 353

Query: 99  RKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTL 158
             +   GL PD +T N +I C      GLC ++R+ EA      M+  G  P+  TY ++
Sbjct: 354 GCVSREGLRPDVVTYNTVI-C------GLCRKSRVVEAEECLHKMVNGGFEPNDFTYNSI 406

Query: 159 INGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLE 218
           I+G+C+ G +  A R+ K  V   +      K + F+Y  +++  C++G  D+A  +F +
Sbjct: 407 IDGYCKKGMVVDANRILKDAVFKGF------KPDEFTYCSLVNGFCQDGDPDQAMAVFKD 460

Query: 219 MKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGK 278
             G+G+ P+++V  TLI G C  G       L  EM + G +P++ T+N++I+ LCK G 
Sbjct: 461 GLGKGLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGC 520

Query: 279 INEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNI 338
           +++AN L+   I +G  PD FTYN+L+DGYC   ++D+A E+   M S+G    V++YN 
Sbjct: 521 LSDANHLIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNT 580

Query: 339 LINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYN 398
           L+NG CK    EE M +++ +   G    +ITYNT++  L  + +   A  L  EMK   
Sbjct: 581 LLNGLCKTAKSEEVMEIFKAMTEKGCAPNIITYNTIIESLCNSKKVNEAVDLLGEMKSKG 640

Query: 399 VEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMN-KFEFGIEIFNCLIDGLCKAGRLDNA 457
           + PD+ ++  LI G CK   +  A  LF  +E           +N +I    +   +  A
Sbjct: 641 LTPDVVSFGTLITGFCKVGDLDGAYGLFRGMEKQYDVSHTTATYNIIISAFSEQLNMKMA 700

Query: 458 WELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHG 517
             LF ++ + G  P   TY ++I G C+ G + +   FLL   + G  P++ TF  +++ 
Sbjct: 701 LRLFSEMKKNGCDPDNYTYRVLIDGFCKTGNVNQGYKFLLENIEKGFIPSLTTFGRVLNC 760

Query: 518 FLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYH 562
               +K  + V ++H M   ++++VPD      V  +   D+K H
Sbjct: 761 LCVEHKVQEAVGIIHLMV--QKDIVPD-----TVNTIFEADKKGH 798



 Score =  248 bits (633), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 148/497 (29%), Positives = 258/497 (51%), Gaps = 15/497 (3%)

Query: 56  LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNI 115
           + EA   F  M      P + S+N +   + +  +++     Y ++    +  D  T  I
Sbjct: 171 IQEAVDTFERMDLFNCDPSVYSYNAIMNILVEFGYFNQAHKVYMRMKDKKVESDVYTYTI 230

Query: 116 LINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLH 175
            I  F       C   R   A  L +NM   G   + + Y T++ GF   G+   A  L 
Sbjct: 231 RIKSF-------CRTGRPYAALRLLRNMPVLGCFSNAVAYCTVVTGFYEFGDNDRARELF 283

Query: 176 KKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLI 235
            +M+    E  L    ++ +++ ++ +LCK+G V +++ LF ++  RG+ P +      I
Sbjct: 284 DEML----ECCLCP--DVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFI 337

Query: 236 HGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLN 295
            G C  G+ +    L   +   G RP+++T+N +I  LC+  ++ EA   L  M+  G  
Sbjct: 338 QGLCKEGSLDRAVRLLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFE 397

Query: 296 PDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSL 355
           P+ FTYNS++DGYC  G +  A  I      KG K    +Y  L+NG+C+  + ++AM++
Sbjct: 398 PNDFTYNSIIDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAV 457

Query: 356 YRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCK 415
           ++  +  G+R ++I YNTL+ GL Q G    A +L +EM     +PD+ TYN++I+GLCK
Sbjct: 458 FKDGLGKGLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCK 517

Query: 416 NNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVT 475
             C+ +A  L            I  +N L+DG C+  +LD+A EL +++  +G+ P V+T
Sbjct: 518 MGCLSDANHLIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVIT 577

Query: 476 YSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMA 535
           Y+ +++GLC+  K E+  +    M + GCAPN++T+NT++     + K ++ V+LL +M 
Sbjct: 578 YNTLLNGLCKTAKSEEVMEIFKAMTEKGCAPNIITYNTIIESLCNSKKVNEAVDLLGEMK 637

Query: 536 EPERNLVPDDTTFSIVV 552
              + L PD  +F  ++
Sbjct: 638 --SKGLTPDVVSFGTLI 652



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 122/476 (25%), Positives = 214/476 (44%), Gaps = 78/476 (16%)

Query: 130 ENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLIS 189
           + +I+EA   F+ M  F   P V +Y  ++N     G  + A +++ +M     E     
Sbjct: 168 KGKIQEAVDTFERMDLFNCDPSVYSYNAIMNILVEFGYFNQAHKVYMRMKDKKVE----- 222

Query: 190 KTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNG 249
            +++++Y+I I S C+ G    A  L   M   G     V   T++ GF   G+ +    
Sbjct: 223 -SDVYTYTIRIKSFCRTGRPYAALRLLRNMPVLGCFSNAVAYCTVVTGFYEFGDNDRARE 281

Query: 250 LFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYC 309
           LF EML+               CLC                     PD  T+N L+   C
Sbjct: 282 LFDEMLEC--------------CLC---------------------PDVTTFNKLVHALC 306

Query: 310 LVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVI 369
             G +  +  +F  +  +G    + ++NI I G CK  +++ A+ L   +   G+R  V+
Sbjct: 307 KKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKEGSLDRAVRLLGCVSREGLRPDVV 366

Query: 370 TYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKL---- 425
           TYNT++ GL +  +   A++   +M     EP+  TYN +IDG CK   V +A ++    
Sbjct: 367 TYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNSIIDGYCKKGMVVDANRILKDA 426

Query: 426 -FHMLEMNKFEF------------------------------GIEIFNCLIDGLCKAGRL 454
            F   + ++F +                               I ++N LI GLC+ G +
Sbjct: 427 VFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKGLRPSIIVYNTLIKGLCQQGLI 486

Query: 455 DNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTL 514
             A +L +++ +KG  P + TY+++I+GLC+ G L  AN  +      GC P++ T+NTL
Sbjct: 487 LPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDANHLIGDAITKGCIPDIFTYNTL 546

Query: 515 MHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKS 570
           + G+ +  K    +EL+++M    + + PD  T++ +++ L K  K  E   + K+
Sbjct: 547 VDGYCRQLKLDSAIELVNRMW--SQGMTPDVITYNTLLNGLCKTAKSEEVMEIFKA 600



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 55/205 (26%), Positives = 96/205 (46%), Gaps = 17/205 (8%)

Query: 361 SNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLC------ 414
             G + T+ TY ++L  L   G+    + L  EM+  N++      N L++G+       
Sbjct: 112 KQGFKHTLFTYKSMLQKLGFHGKFNEMENLLSEMR-SNLD------NTLLEGVYVEAMRF 164

Query: 415 --KNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPT 472
             +   +QEAV  F  +++   +  +  +N +++ L + G  + A +++ ++  K +   
Sbjct: 165 YGRKGKIQEAVDTFERMDLFNCDPSVYSYNAIMNILVEFGYFNQAHKVYMRMKDKKVESD 224

Query: 473 VVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLH 532
           V TY+I I   CR G+   A   L  M   GC  N V + T++ GF +     +  EL  
Sbjct: 225 VYTYTIRIKSFCRTGRPYAALRLLRNMPVLGCFSNAVAYCTVVTGFYEFGDNDRARELFD 284

Query: 533 KMAEPERNLVPDDTTFSIVVDLLAK 557
           +M E    L PD TTF+ +V  L K
Sbjct: 285 EMLEC--CLCPDVTTFNKLVHALCK 307


>gi|255572227|ref|XP_002527053.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223533615|gb|EEF35353.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 677

 Score =  263 bits (671), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 166/513 (32%), Positives = 270/513 (52%), Gaps = 17/513 (3%)

Query: 56  LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNI 115
           LNE    F  +        I++ N L G + K    D     Y ++   G+  +  TLNI
Sbjct: 131 LNEGTDTFKILRRKGFLVSINACNSLLGGLVKMGWVDLAWEVYNEIARSGIELNVYTLNI 190

Query: 116 LINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLH 175
           ++N        LC +++I +      +M   G+  D++TY TLIN +CR G L  A  + 
Sbjct: 191 MVN-------ALCKDHKIDDVKPFLIDMEQKGIFADIVTYNTLINAYCREGLLGEAFEVM 243

Query: 176 KKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLI 235
             M SG    GL  K  +F+Y+ +I+ LCK+G   +AK +F EM   G++P      TL+
Sbjct: 244 NSM-SG---KGL--KPTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIGLSPDTTTYNTLL 297

Query: 236 HGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLN 295
              C   N+ E   +F +ML  G  P+L++F+ +I    + G +++A      M   GL 
Sbjct: 298 VESCRNNNFLEAKDIFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQALMYFRDMKTSGLV 357

Query: 296 PDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSL 355
           PD   Y  L++GYC  G +  A EI   M  +GC   VV+YN ++NG CK   + +A +L
Sbjct: 358 PDNVIYTILINGYCRNGMMSEALEIRDKMLEQGCALDVVAYNTILNGLCKKKLLADANAL 417

Query: 356 YRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCK 415
           + +++  GV     T+ TL+ G  + G  G A  LF  M   N++PD+ TYNILIDG CK
Sbjct: 418 FDEMVERGVVPDFCTFTTLIHGHCKEGNMGKALSLFGIMTQKNIKPDIVTYNILIDGFCK 477

Query: 416 NNCVQEAVKLFH-MLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVV 474
              +++A +L++ M+    F   I  +  L++G C  G +  A+ L+ ++ +KG+ PT+V
Sbjct: 478 TTEMEKANELWNEMISRKIFPNHIS-YAILVNGYCNLGFVSEAFRLWDEMIRKGIKPTLV 536

Query: 475 TYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKM 534
           T + +I G CR G L KA++FL  M   G  P+ +T+NTL++GF++     K   L++KM
Sbjct: 537 TCNTVIKGYCRSGDLSKADEFLGKMISEGVGPDSITYNTLINGFVKGEYMDKAFFLINKM 596

Query: 535 AEPERNLVPDDTTFSIVVDLLAKDEKYHECSAV 567
               + L PD  T++++++   +  +  E   +
Sbjct: 597 E--TKGLQPDVVTYNVILNGFCRQGRMQEAELI 627



 Score =  232 bits (591), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 151/505 (29%), Positives = 252/505 (49%), Gaps = 17/505 (3%)

Query: 41  LNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRK 100
           LN  ++  CK   I+  + + F   M        I ++N L  A  +             
Sbjct: 188 LNIMVNALCKDHKID--DVKPFLIDMEQKGIFADIVTYNTLINAYCREGLLGEAFEVMNS 245

Query: 101 LVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLIN 160
           +   GL P   T N +IN       GLC + R   A  +F  M++ G+ PD  TY TL+ 
Sbjct: 246 MSGKGLKPTLFTYNAVIN-------GLCKKGRYVRAKGVFNEMLSIGLSPDTTTYNTLLV 298

Query: 161 GFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMK 220
             CR  N   A  +   M+       LIS      +S +I    + G +D+A   F +MK
Sbjct: 299 ESCRNNNFLEAKDIFSDMLHRGVSPDLIS------FSSLIGVSSRNGHLDQALMYFRDMK 352

Query: 221 GRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKIN 280
             G+ P  V+ T LI+G+C  G   E   +  +ML+ G   +++ +N +++ LCK   + 
Sbjct: 353 TSGLVPDNVIYTILINGYCRNGMMSEALEIRDKMLEQGCALDVVAYNTILNGLCKKKLLA 412

Query: 281 EANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILI 340
           +AN L + M++RG+ PD  T+ +L+ G+C  G +  A  +F  M  K  K  +V+YNILI
Sbjct: 413 DANALFDEMVERGVVPDFCTFTTLIHGHCKEGNMGKALSLFGIMTQKNIKPDIVTYNILI 472

Query: 341 NGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVE 400
           +G+CK   +E+A  L+ ++IS  +    I+Y  L++G    G    A +L+DEM    ++
Sbjct: 473 DGFCKTTEMEKANELWNEMISRKIFPNHISYAILVNGYCNLGFVSEAFRLWDEMIRKGIK 532

Query: 401 PDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWEL 460
           P L T N +I G C++  + +A +    +           +N LI+G  K   +D A+ L
Sbjct: 533 PTLVTCNTVIKGYCRSGDLSKADEFLGKMISEGVGPDSITYNTLINGFVKGEYMDKAFFL 592

Query: 461 FHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQ 520
            +K+  KGL P VVTY+++++G CR+G++++A   L  M + G  P+  T+ TL++G++ 
Sbjct: 593 INKMETKGLQPDVVTYNVILNGFCRQGRMQEAELILRKMIERGIDPDRSTYTTLINGYVS 652

Query: 521 NNKTSKVVELLHKMAEPERNLVPDD 545
            +   +      +M   +R  VPDD
Sbjct: 653 QDNLKEAFRFHDEML--QRGFVPDD 675



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 106/362 (29%), Positives = 186/362 (51%), Gaps = 2/362 (0%)

Query: 196 YSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEML 255
           + ++I S  +   +++  + F  ++ +G   ++  C +L+ G    G  +    ++ E+ 
Sbjct: 118 FDLLIRSYVQARKLNEGTDTFKILRRKGFLVSINACNSLLGGLVKMGWVDLAWEVYNEIA 177

Query: 256 DLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRID 315
             G   N+ T N+M++ LCK  KI++    L  M Q+G+  D  TYN+L++ YC  G + 
Sbjct: 178 RSGIELNVYTLNIMVNALCKDHKIDDVKPFLIDMEQKGIFADIVTYNTLINAYCREGLLG 237

Query: 316 TAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLL 375
            A E+  SM  KG K T+ +YN +ING CK      A  ++ +++S G+     TYNTLL
Sbjct: 238 EAFEVMNSMSGKGLKPTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIGLSPDTTTYNTLL 297

Query: 376 SGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFE 435
               +      A+ +F +M    V PDL +++ LI    +N  + +A+  F  ++ +   
Sbjct: 298 VESCRNNNFLEAKDIFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQALMYFRDMKTSGLV 357

Query: 436 FGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDF 495
               I+  LI+G C+ G +  A E+  K+ ++G    VV Y+ +++GLC+K  L  AN  
Sbjct: 358 PDNVIYTILINGYCRNGMMSEALEIRDKMLEQGCALDVVAYNTILNGLCKKKLLADANAL 417

Query: 496 LLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLL 555
              M + G  P+  TF TL+HG  +     K + L   M   ++N+ PD  T++I++D  
Sbjct: 418 FDEMVERGVVPDFCTFTTLIHGHCKEGNMGKALSLFGIMT--QKNIKPDIVTYNILIDGF 475

Query: 556 AK 557
            K
Sbjct: 476 CK 477



 Score =  125 bits (314), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 86/324 (26%), Positives = 148/324 (45%), Gaps = 37/324 (11%)

Query: 264 LTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLS 323
           L F+++I    +  K+NE     +++ ++G        NSL+ G   +G +D A E++  
Sbjct: 116 LVFDLLIRSYVQARKLNEGTDTFKILRRKGFLVSINACNSLLGGLVKMGWVDLAWEVYNE 175

Query: 324 MHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQ 383
           +   G +  V + NI++N  CK   +++       +   G+   ++TYNTL++   + G 
Sbjct: 176 IARSGIELNVYTLNIMVNALCKDHKIDDVKPFLIDMEQKGIFADIVTYNTLINAYCREGL 235

Query: 384 AGYAQKLFDEMKLYNVEPDLSTYNILIDGLCK---------------------------- 415
            G A ++ + M    ++P L TYN +I+GLCK                            
Sbjct: 236 LGEAFEVMNSMSGKGLKPTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIGLSPDTTTYNT 295

Query: 416 -------NNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKG 468
                  NN   EA  +F  +        +  F+ LI    + G LD A   F  +   G
Sbjct: 296 LLVESCRNNNFLEAKDIFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQALMYFRDMKTSG 355

Query: 469 LVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVV 528
           LVP  V Y+I+I+G CR G + +A +    M + GCA +VV +NT+++G  +    +   
Sbjct: 356 LVPDNVIYTILINGYCRNGMMSEALEIRDKMLEQGCALDVVAYNTILNGLCKKKLLADAN 415

Query: 529 ELLHKMAEPERNLVPDDTTFSIVV 552
            L  +M   ER +VPD  TF+ ++
Sbjct: 416 ALFDEMV--ERGVVPDFCTFTTLI 437



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 66/248 (26%), Positives = 128/248 (51%), Gaps = 4/248 (1%)

Query: 311 VGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVIT 370
           V R++   E  +SM S  C    + +++LI  Y +   + E    ++ +   G   ++  
Sbjct: 95  VSRVEIV-ESLISMSST-CGVDNLVFDLLIRSYVQARKLNEGTDTFKILRRKGFLVSINA 152

Query: 371 YNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLE 430
            N+LL GL + G    A ++++E+    +E ++ T NI+++ LCK++ + +       +E
Sbjct: 153 CNSLLGGLVKMGWVDLAWEVYNEIARSGIELNVYTLNIMVNALCKDHKIDDVKPFLIDME 212

Query: 431 MNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLE 490
                  I  +N LI+  C+ G L  A+E+ + +  KGL PT+ TY+ +I+GLC+KG+  
Sbjct: 213 QKGIFADIVTYNTLINAYCREGLLGEAFEVMNSMSGKGLKPTLFTYNAVINGLCKKGRYV 272

Query: 491 KANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSI 550
           +A      M   G +P+  T+NTL+    +NN   +  ++   M    R + PD  +FS 
Sbjct: 273 RAKGVFNEMLSIGLSPDTTTYNTLLVESCRNNNFLEAKDIFSDML--HRGVSPDLISFSS 330

Query: 551 VVDLLAKD 558
           ++ + +++
Sbjct: 331 LIGVSSRN 338



 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 60/257 (23%), Positives = 125/257 (48%), Gaps = 2/257 (0%)

Query: 297 DRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLY 356
           D   ++ L+  Y    +++   + F  +  KG   ++ + N L+ G  K+  V+ A  +Y
Sbjct: 114 DNLVFDLLIRSYVQARKLNEGTDTFKILRRKGFLVSINACNSLLGGLVKMGWVDLAWEVY 173

Query: 357 RQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKN 416
            +I  +G+   V T N +++ L +  +    +    +M+   +  D+ TYN LI+  C+ 
Sbjct: 174 NEIARSGIELNVYTLNIMVNALCKDHKIDDVKPFLIDMEQKGIFADIVTYNTLINAYCRE 233

Query: 417 NCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTY 476
             + EA ++ + +     +  +  +N +I+GLCK GR   A  +F+++   GL P   TY
Sbjct: 234 GLLGEAFEVMNSMSGKGLKPTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIGLSPDTTTY 293

Query: 477 SIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAE 536
           + ++   CR     +A D    M   G +P++++F++L+    +N    + +     M  
Sbjct: 294 NTLLVESCRNNNFLEAKDIFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQALMYFRDMKT 353

Query: 537 PERNLVPDDTTFSIVVD 553
               LVPD+  ++I+++
Sbjct: 354 S--GLVPDNVIYTILIN 368


>gi|242069957|ref|XP_002450255.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
 gi|241936098|gb|EES09243.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
          Length = 924

 Score =  262 bits (670), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 176/616 (28%), Positives = 283/616 (45%), Gaps = 122/616 (19%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CK+  ++  E    F  M      P   ++N +   + K +  D     +++++  G+ P
Sbjct: 306 CKAQAVDRAEG--VFQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKP 363

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           D LT  I+I+       GLC    +  A  +F+ MI  GV+P+  TY  LI+G+  TG  
Sbjct: 364 DNLTYTIIID-------GLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQW 416

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
              ++  K+M + D E       ++F+Y +++D LCK G  ++A+ LF  M  +GI P+V
Sbjct: 417 EEVVQRIKEMSAHDLE------PDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSV 470

Query: 229 VVCTTLIHGFCCAGNWEEVNGL-----------------------------------FIE 253
            +   ++HG+   G   E++ L                                   FI+
Sbjct: 471 TIYGIMLHGYGKKGALSEMHDLLNLMVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIK 530

Query: 254 MLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGR 313
           M   G  PN++T+  +ID LCK G++++A      MI  G+ P+   +NSL+ G C V +
Sbjct: 531 MKQQGLSPNVVTYGTLIDALCKLGRVDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDK 590

Query: 314 IDTAREIFLSMHSKG---------------CKH--------------------TVVSYNI 338
            +   E+FL M ++G               CK                      V+SYN 
Sbjct: 591 WEKVEELFLEMLNQGIRPDIVFFNTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNT 650

Query: 339 LINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYN 398
           LI+G+C    ++EA+ L   ++S G++  +++YNTLL G  +AG+   A  LF EM    
Sbjct: 651 LIDGHCFASRMDEAVKLLDGMVSAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKG 710

Query: 399 VEPDLSTYN-----------------------------------ILIDGLCKNNCVQEAV 423
           V P + TYN                                   I++DG CKNNC  EA 
Sbjct: 711 VTPGVETYNTILNGLFRSGRFSEARELYVNMIKSRKLWSICTYSIILDGFCKNNCFDEAF 770

Query: 424 KLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGL 483
           K+F  L     +  I  FN +IDGL K GR ++A +LF  +P  GLVP+VVTY ++   L
Sbjct: 771 KIFQSLCSMDLQLDIITFNIMIDGLFKGGRKEDAMDLFAAIPANGLVPSVVTYRLIAENL 830

Query: 484 CRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVP 543
             +G LE+ +     MEK+G APN    N L+   L   +  +    L K+   E+N   
Sbjct: 831 IEEGSLEELDCLFSVMEKSGTAPNSHMLNALIRKLLDRGEIPRAGAYLSKL--DEKNFSL 888

Query: 544 DDTTFSIVVDLLAKDE 559
           + +T S+++ L +++E
Sbjct: 889 EASTTSMLISLFSREE 904



 Score =  257 bits (656), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 160/492 (32%), Positives = 251/492 (51%), Gaps = 21/492 (4%)

Query: 75  ISSFNLLFGAVAKNRHYDAVISFYRKLVS---IGLLPDFLTLNILINCFGNKERGLCVEN 131
           + S+N L   +   R  +        +V        PD ++ NI+IN F N       E 
Sbjct: 155 VVSYNTLLKGLCDRRRAEEARELLHMMVDGQDSSCSPDVVSYNIVINGFFN-------EG 207

Query: 132 RIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKT 191
           ++ +A  LF  M   GV PDV+TY T+I+G C+   +  A  + ++MV    E G+  K 
Sbjct: 208 QVDKAYSLFLEM---GVSPDVVTYNTIIDGLCKAQEVDRAEDVFQQMV----EKGV--KP 258

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
           N  +Y+ IID LCK   VD A+ +F +M  +G+ P+ V   T+I G C A   +   G+F
Sbjct: 259 NNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAEGVF 318

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
            +M+D G +P+ +T+N +ID LCK   I++A G+ + MI +G+ PD  TY  ++DG C  
Sbjct: 319 QQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKA 378

Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
             +D A  +F  M  KG K    +YN LI+GY      EE +   +++ ++ +   V TY
Sbjct: 379 QSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTY 438

Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
             LL  L + G+   A+ LFD M    ++P ++ Y I++ G  K   + E   L +++  
Sbjct: 439 GLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMHDLLNLMVA 498

Query: 432 NKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEK 491
           N       IFN +I    K   +D    +F K+ Q+GL P VVTY  +I  LC+ G+++ 
Sbjct: 499 NGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVDD 558

Query: 492 ANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIV 551
           A      M   G  PN V FN+L++G    +K  KV EL  +M    + + PD   F+ V
Sbjct: 559 AVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEML--NQGIRPDIVFFNTV 616

Query: 552 VDLLAKDEKYHE 563
           +  L K+ +  E
Sbjct: 617 LCNLCKEGRVME 628



 Score =  248 bits (633), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 148/529 (27%), Positives = 261/529 (49%), Gaps = 34/529 (6%)

Query: 41  LNEFLHENCKSGIINLN-------------EARYFFGYMTHMQPS---PPISSFNLLFGA 84
           L +     C+ G+++ N             EAR     M   Q S   P + S+N++   
Sbjct: 143 LRQMPEVGCRLGVVSYNTLLKGLCDRRRAEEARELLHMMVDGQDSSCSPDVVSYNIVING 202

Query: 85  VAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMI 144
                  D   S +   + +G+ PD +T N +I+       GLC    +  A  +F+ M+
Sbjct: 203 FFNEGQVDKAYSLF---LEMGVSPDVVTYNTIID-------GLCKAQEVDRAEDVFQQMV 252

Query: 145 AFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLC 204
             GV+P+ +TY T+I+G C+   + +A  + +KMV    + G+  K +  +Y+ IID LC
Sbjct: 253 EKGVKPNNVTYNTIIDGLCKAQEVDMAEGVFQKMV----DKGV--KPSNVTYNTIIDGLC 306

Query: 205 KEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLL 264
           K   VD+A+ +F +M  RG+ P  V   T+I G C A   ++  G+F +M+D G +P+ L
Sbjct: 307 KAQAVDRAEGVFQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNL 366

Query: 265 TFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSM 324
           T+ ++ID LCK   ++ A G+ + MI +G+ P+  TYN L+ GY   G+ +   +    M
Sbjct: 367 TYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEM 426

Query: 325 HSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQA 384
            +   +  V +Y +L++  CK     EA SL+  +I  G++ +V  Y  +L G  + G  
Sbjct: 427 SAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGAL 486

Query: 385 GYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCL 444
                L + M    + P+   +N +I    K   + E + +F  ++       +  +  L
Sbjct: 487 SEMHDLLNLMVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTL 546

Query: 445 IDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGC 504
           ID LCK GR+D+A   F+++  +G+ P  V ++ +++GLC   K EK  +  L M   G 
Sbjct: 547 IDALCKLGRVDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGI 606

Query: 505 APNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
            P++V FNT++    +  +  +   L+  M      L PD  +++ ++D
Sbjct: 607 RPDIVFFNTVLCNLCKEGRVMEARRLIDSMV--CMGLKPDVISYNTLID 653



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 141/478 (29%), Positives = 234/478 (48%), Gaps = 73/478 (15%)

Query: 148 VRPDVITYGTLINGFCRTGNLSVAL-----------RLHKKMVS------------GDYE 184
           V PD  TY  +I  FCR G L +             R+   +V+            G+  
Sbjct: 80  VAPDCCTYSIVIGCFCRIGRLELGFAAFGLILKTGWRVDDIVVNQLLKGLCDTKRVGEAM 139

Query: 185 NGLIS-------KTNIFSYSIIIDSLCKEGLVDKAKELFLEM---KGRGINPAVVVCTTL 234
           + L+        +  + SY+ ++  LC     ++A+EL   M   +    +P VV    +
Sbjct: 140 HVLLRQMPEVGCRLGVVSYNTLLKGLCDRRRAEEARELLHMMVDGQDSSCSPDVVSYNIV 199

Query: 235 IHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGL 294
           I+GF   G  ++   LF+EM   G  P+++T+N +ID LCK  +++ A  + + M+++G+
Sbjct: 200 INGFFNEGQVDKAYSLFLEM---GVSPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGV 256

Query: 295 NPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMS 354
            P+  TYN+++DG C    +D A  +F  M  KG K + V+YN +I+G CK   V+ A  
Sbjct: 257 KPNNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAEG 316

Query: 355 LYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLC 414
           +++Q+I  GV+   +TYNT++ GL +A     A+ +F +M    V+PD  TY I+IDGLC
Sbjct: 317 VFQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLC 376

Query: 415 KNNCVQEAVKLFHML---------------------------------EMNKFEFGIEIF 441
           K   V  A  +F  +                                 EM+  +   ++F
Sbjct: 377 KAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVF 436

Query: 442 N--CLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYM 499
               L+D LCK G+ + A  LF  + +KG+ P+V  Y IM+HG  +KG L + +D L  M
Sbjct: 437 TYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMHDLLNLM 496

Query: 500 EKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAK 557
             NG +PN   FNT++  + +     +V+ +  KM   ++ L P+  T+  ++D L K
Sbjct: 497 VANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKM--KQQGLSPNVVTYGTLIDALCK 552



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 9/311 (2%)

Query: 261 PNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREI 320
           P+  T++++I C C+ G++        L+++ G   D    N L+ G C   R+  A  +
Sbjct: 82  PDCCTYSIVIGCFCRIGRLELGFAAFGLILKTGWRVDDIVVNQLLKGLCDTKRVGEAMHV 141

Query: 321 FL-SMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQII---SNGVRQTVITYNTLLS 376
            L  M   GC+  VVSYN L+ G C     EEA  L   ++    +     V++YN +++
Sbjct: 142 LLRQMPEVGCRLGVVSYNTLLKGLCDRRRAEEARELLHMMVDGQDSSCSPDVVSYNIVIN 201

Query: 377 GLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEF 436
           G F  GQ   A  LF EM    V PD+ TYN +IDGLCK   V  A  +F  +     + 
Sbjct: 202 GFFNEGQVDKAYSLFLEM---GVSPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGVKP 258

Query: 437 GIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFL 496
               +N +IDGLCKA  +D A  +F K+  KG+ P+ VTY+ +I GLC+   +++A    
Sbjct: 259 NNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAEGVF 318

Query: 497 LYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLA 556
             M   G  P+ VT+NT++ G  +     K   +  +M   ++ + PD+ T++I++D L 
Sbjct: 319 QQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMI--DKGVKPDNLTYTIIIDGLC 376

Query: 557 KDEKYHECSAV 567
           K +       V
Sbjct: 377 KAQSVDRAEGV 387



 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 102/377 (27%), Positives = 181/377 (48%), Gaps = 15/377 (3%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CK G   +++A   F  M +   +P    FN L   +     ++ V   + ++++ G+ P
Sbjct: 551 CKLG--RVDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRP 608

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           D +  N ++ C       LC E R+ EA  L  +M+  G++PDVI+Y TLI+G C    +
Sbjct: 609 DIVFFNTVL-C------NLCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFASRM 661

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
             A++L   MVS     GL  K NI SY+ ++   CK G +D A  LF EM  +G+ P V
Sbjct: 662 DEAVKLLDGMVSA----GL--KPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGV 715

Query: 229 VVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLEL 288
               T+++G   +G + E   L++ M+      ++ T+++++D  CK    +EA  + + 
Sbjct: 716 ETYNTILNGLFRSGRFSEARELYVNMIKSRKLWSICTYSIILDGFCKNNCFDEAFKIFQS 775

Query: 289 MIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILN 348
           +    L  D  T+N ++DG    GR + A ++F ++ + G   +VV+Y ++     +  +
Sbjct: 776 LCSMDLQLDIITFNIMIDGLFKGGRKEDAMDLFAAIPANGLVPSVVTYRLIAENLIEEGS 835

Query: 349 VEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNI 408
           +EE   L+  +  +G        N L+  L   G+   A     ++   N   + ST ++
Sbjct: 836 LEELDCLFSVMEKSGTAPNSHMLNALIRKLLDRGEIPRAGAYLSKLDEKNFSLEASTTSM 895

Query: 409 LIDGLCKNNCVQEAVKL 425
           LI    +    Q A  L
Sbjct: 896 LISLFSREEYQQHAKSL 912



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 58/231 (25%), Positives = 111/231 (48%), Gaps = 15/231 (6%)

Query: 347 LNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQA---GQAGYAQKLFDEMKL---YNVE 400
           L + +A+ L+ +++ +    +V   N LLS + +A     +  A   F+ M       V 
Sbjct: 22  LGLHDALKLFDELLLHARPASVRALNQLLSVVSRAKCSSSSKLAVSRFNRMLRDCSNKVA 81

Query: 401 PDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWE- 459
           PD  TY+I+I   C+   ++     F ++    +     + N L+ GLC   R+  A   
Sbjct: 82  PDCCTYSIVIGCFCRIGRLELGFAAFGLILKTGWRVDDIVVNQLLKGLCDTKRVGEAMHV 141

Query: 460 LFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYM---EKNGCAPNVVTFNTLMH 516
           L  ++P+ G    VV+Y+ ++ GLC + + E+A + L  M   + + C+P+VV++N +++
Sbjct: 142 LLRQMPEVGCRLGVVSYNTLLKGLCDRRRAEEARELLHMMVDGQDSSCSPDVVSYNIVIN 201

Query: 517 GFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAV 567
           GF    +  K   L  +M      + PD  T++ ++D L K ++      V
Sbjct: 202 GFFNEGQVDKAYSLFLEMG-----VSPDVVTYNTIIDGLCKAQEVDRAEDV 247


>gi|115440343|ref|NP_001044451.1| Os01g0783100 [Oryza sativa Japonica Group]
 gi|20804869|dbj|BAB92551.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|113533982|dbj|BAF06365.1| Os01g0783100 [Oryza sativa Japonica Group]
          Length = 684

 Score =  262 bits (670), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 145/487 (29%), Positives = 252/487 (51%), Gaps = 21/487 (4%)

Query: 77  SFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEA 136
           ++N L     +    DA     R + S+ + PD  T   +I       RGLC   R+ EA
Sbjct: 115 AYNTLVAGYCRYGQLDAA---RRLIASMPVAPDAYTYTPII-------RGLCDRGRVGEA 164

Query: 137 TWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSY 196
             L  +M+  G +P V+TY  L+   C++     A+ +  +M +           NI +Y
Sbjct: 165 LSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKG------CTPNIVTY 218

Query: 197 SIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLD 256
           ++II+ +C+EG VD A+E    +   G  P  V  TT++ G C A  WE+V  LF EM++
Sbjct: 219 NVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMME 278

Query: 257 LGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDT 316
               PN +TF++++   C+GG +  A  +LE M   G   +    N +++  C  GR+D 
Sbjct: 279 KNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDD 338

Query: 317 AREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLS 376
           A +   +M S GC    +SY  ++ G C+    E+A  L ++++        +T+NT + 
Sbjct: 339 AFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFIC 398

Query: 377 GLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEF 436
            L Q G    A  L ++M  +  E ++ TYN L++G C    V  A++LF+ +       
Sbjct: 399 ILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCKPNTI 458

Query: 437 GIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFL 496
               +  L+ GLC A RLD A EL  ++ QK   P VVT+++++   C+KG +++A + +
Sbjct: 459 ---TYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELV 515

Query: 497 LYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLA 556
             M ++GC PN++T+NTL+ G  ++  + + +ELLH +      + PD  T+S ++ +L+
Sbjct: 516 EQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLV--SNGVSPDIVTYSSIIGVLS 573

Query: 557 KDEKYHE 563
           ++++  E
Sbjct: 574 REDRVEE 580



 Score =  249 bits (635), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 148/507 (29%), Positives = 256/507 (50%), Gaps = 29/507 (5%)

Query: 41  LNEFLHENCKSGIIN-------------LNEARYFFGYMTHMQPSPPISSFNLLFGAVAK 87
           L++ LH  C+  ++                +A      M     +P I ++N++   + +
Sbjct: 168 LDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCR 227

Query: 88  NRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFG 147
               D    F  +L S G  PD ++   ++       +GLC   R ++   LF  M+   
Sbjct: 228 EGRVDDAREFLNRLSSYGFQPDTVSYTTVL-------KGLCAAKRWEDVEELFAEMMEKN 280

Query: 148 VRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEG 207
             P+ +T+  L+  FCR G +  A+++ ++M SG   +G  + T + +  I+I+++CK+G
Sbjct: 281 CMPNEVTFDMLVRFFCRGGMVERAIQVLEQM-SG---HGCAANTTLCN--IVINTICKQG 334

Query: 208 LVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFN 267
            VD A +    M   G +P  +  TT++ G C A  WE+   L  EM+     PN +TFN
Sbjct: 335 RVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFN 394

Query: 268 VMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSK 327
             I  LC+ G I +A  L+E M + G   +  TYN+L++G+C+ GR+D+A E+F SM   
Sbjct: 395 TFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMP-- 452

Query: 328 GCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYA 387
            CK   ++Y  L+ G C    ++ A  L  +++       V+T+N L+S   Q G    A
Sbjct: 453 -CKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEA 511

Query: 388 QKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDG 447
            +L ++M  +   P+L TYN L+DG+ K+   +EA++L H L  N     I  ++ +I  
Sbjct: 512 IELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGV 571

Query: 448 LCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPN 507
           L +  R++ A ++FH +   G+ P  V Y+ ++  LC++   + A DF  YM  NGC PN
Sbjct: 572 LSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPN 631

Query: 508 VVTFNTLMHGFLQNNKTSKVVELLHKM 534
            +T+ TL+ G    +   +  +LL ++
Sbjct: 632 ELTYITLIEGLANEDFLKETRDLLREL 658



 Score =  232 bits (592), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 146/494 (29%), Positives = 228/494 (46%), Gaps = 56/494 (11%)

Query: 100 KLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLI 159
           +  S G  PD      LI       R LC   R  +A  + +     G   DV  Y TL+
Sbjct: 68  RATSRGEAPDVYLCTKLI-------RNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLV 120

Query: 160 NGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEM 219
            G+CR G L  A RL   M             + ++Y+ II  LC  G V +A  L  +M
Sbjct: 121 AGYCRYGQLDAARRLIASMPVA---------PDAYTYTPIIRGLCDRGRVGEALSLLDDM 171

Query: 220 KGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKI 279
             RG  P+VV  T L+   C +  + +   +  EM   G  PN++T+NV+I+ +C+ G++
Sbjct: 172 LHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRV 231

Query: 280 NEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSY--- 336
           ++A   L  +   G  PD  +Y +++ G C   R +   E+F  M  K C    V++   
Sbjct: 232 DDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDML 291

Query: 337 --------------------------------NILINGYCKILNVEEAMSLYRQIISNGV 364
                                           NI+IN  CK   V++A      + S G 
Sbjct: 292 VRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGC 351

Query: 365 RQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVK 424
               I+Y T+L GL +A +   A++L  EM   N  P+  T+N  I  LC+   +++A  
Sbjct: 352 SPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATM 411

Query: 425 LFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLC 484
           L   +  +  E  I  +N L++G C  GR+D+A ELF+ +P K   P  +TY+ ++ GLC
Sbjct: 412 LIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCK---PNTITYTTLLTGLC 468

Query: 485 RKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPD 544
              +L+ A + L  M +  CAPNVVTFN L+  F Q     + +EL+ +M   E    P+
Sbjct: 469 NAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMM--EHGCTPN 526

Query: 545 DTTFSIVVDLLAKD 558
             T++ ++D + KD
Sbjct: 527 LITYNTLLDGITKD 540



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 100/358 (27%), Positives = 168/358 (46%), Gaps = 32/358 (8%)

Query: 211 KAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWE---------EVNGLFIEM------- 254
           +A  L      RG  P V +CT LI   C  G            E +G  +++       
Sbjct: 61  EAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLV 120

Query: 255 --------LDLGPR--------PNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDR 298
                   LD   R        P+  T+  +I  LC  G++ EA  LL+ M+ RG  P  
Sbjct: 121 AGYCRYGQLDAARRLIASMPVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSV 180

Query: 299 FTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQ 358
            TY  L++  C       A E+   M +KGC   +V+YN++ING C+   V++A     +
Sbjct: 181 VTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNR 240

Query: 359 IISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNC 418
           + S G +   ++Y T+L GL  A +    ++LF EM   N  P+  T+++L+   C+   
Sbjct: 241 LSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGM 300

Query: 419 VQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSI 478
           V+ A+++   +  +       + N +I+ +CK GR+D+A++  + +   G  P  ++Y+ 
Sbjct: 301 VERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTT 360

Query: 479 MIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAE 536
           ++ GLCR  + E A + L  M +  C PN VTFNT +    Q     +   L+ +M+E
Sbjct: 361 VLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSE 418



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 88/316 (27%), Positives = 159/316 (50%), Gaps = 5/316 (1%)

Query: 258 GPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTA 317
           G  P++     +I  LC+ G+ ++A  +L    + G   D F YN+L+ GYC  G++D A
Sbjct: 73  GEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAA 132

Query: 318 REIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSG 377
           R +  SM      +T   Y  +I G C    V EA+SL   ++  G + +V+TY  LL  
Sbjct: 133 RRLIASMPVAPDAYT---YTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEA 189

Query: 378 LFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFG 437
           + ++   G A ++ DEM+     P++ TYN++I+G+C+   V +A +  + L    F+  
Sbjct: 190 VCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPD 249

Query: 438 IEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLL 497
              +  ++ GLC A R ++  ELF ++ +K  +P  VT+ +++   CR G +E+A   L 
Sbjct: 250 TVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLE 309

Query: 498 YMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAK 557
            M  +GCA N    N +++   +  +     + L+ M        PD  +++ V+  L +
Sbjct: 310 QMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMG--SYGCSPDTISYTTVLKGLCR 367

Query: 558 DEKYHECSAVSKSSYR 573
            E++ +   + K   R
Sbjct: 368 AERWEDAKELLKEMVR 383



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 72/257 (28%), Positives = 125/257 (48%), Gaps = 3/257 (1%)

Query: 279 INEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNI 338
           + EA  L++    RG  PD +    L+   C  GR   A  +  +    G    V +YN 
Sbjct: 59  LAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNT 118

Query: 339 LINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYN 398
           L+ GYC+   ++ A    R I S  V     TY  ++ GL   G+ G A  L D+M    
Sbjct: 119 LVAGYCRYGQLDAA---RRLIASMPVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRG 175

Query: 399 VEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAW 458
            +P + TY +L++ +CK+    +A+++   +        I  +N +I+G+C+ GR+D+A 
Sbjct: 176 CQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAR 235

Query: 459 ELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGF 518
           E  ++L   G  P  V+Y+ ++ GLC   + E   +    M +  C PN VTF+ L+  F
Sbjct: 236 EFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFF 295

Query: 519 LQNNKTSKVVELLHKMA 535
            +     + +++L +M+
Sbjct: 296 CRGGMVERAIQVLEQMS 312



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 84/342 (24%), Positives = 153/342 (44%), Gaps = 35/342 (10%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CK G   +++A  F   M     SP   S+  +   + +   ++      +++V     P
Sbjct: 331 CKQG--RVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPP 388

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           + +T N  I C       LC +  I++AT L + M   G   +++TY  L+NGFC  G +
Sbjct: 389 NEVTFNTFI-CI------LCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRV 441

Query: 169 SVALRL------------HKKMVSG-------DYENGLISK-------TNIFSYSIIIDS 202
             AL L            +  +++G       D    L+++        N+ ++++++  
Sbjct: 442 DSALELFYSMPCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSF 501

Query: 203 LCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPN 262
            C++GL+D+A EL  +M   G  P ++   TL+ G     N EE   L   ++  G  P+
Sbjct: 502 FCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPD 561

Query: 263 LLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFL 322
           ++T++ +I  L +  ++ EA  +  ++   G+ P    YN ++   C     D A + F 
Sbjct: 562 IVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFA 621

Query: 323 SMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGV 364
            M S GC    ++Y  LI G      ++E   L R++ S GV
Sbjct: 622 YMVSNGCMPNELTYITLIEGLANEDFLKETRDLLRELCSRGV 663



 Score = 83.2 bits (204), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 47/192 (24%), Positives = 89/192 (46%), Gaps = 5/192 (2%)

Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
           N  L  L        A +L D        PD+     LI  LC+     +A ++    E 
Sbjct: 47  NARLRRLIARDDLAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAER 106

Query: 432 NKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEK 491
           +     +  +N L+ G C+ G+LD A  L   +P   + P   TY+ +I GLC +G++ +
Sbjct: 107 SGTAVDVFAYNTLVAGYCRYGQLDAARRLIASMP---VAPDAYTYTPIIRGLCDRGRVGE 163

Query: 492 ANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIV 551
           A   L  M   GC P+VVT+  L+    ++    + +E+L +M    +   P+  T++++
Sbjct: 164 ALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMR--AKGCTPNIVTYNVI 221

Query: 552 VDLLAKDEKYHE 563
           ++ + ++ +  +
Sbjct: 222 INGMCREGRVDD 233



 Score = 47.8 bits (112), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 34/132 (25%), Positives = 57/132 (43%), Gaps = 12/132 (9%)

Query: 454 LDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNT 513
           L  A  L  +   +G  P V   + +I  LCR+G+   A   L   E++G A +V  +NT
Sbjct: 59  LAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNT 118

Query: 514 LMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHEC-SAVSKSSY 572
           L+ G+ +  +      L+  M      + PD  T++ ++  L    +  E  S +    +
Sbjct: 119 LVAGYCRYGQLDAARRLIASMP-----VAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLH 173

Query: 573 RACLYVTIFQPS 584
           R C      QPS
Sbjct: 174 RGC------QPS 179


>gi|125527955|gb|EAY76069.1| hypothetical protein OsI_03997 [Oryza sativa Indica Group]
          Length = 684

 Score =  262 bits (669), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 145/487 (29%), Positives = 251/487 (51%), Gaps = 21/487 (4%)

Query: 77  SFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEA 136
           ++N L     +    DA     R + S+ + PD  T   +I       RGLC   R+ EA
Sbjct: 115 AYNTLVAGYCRYGQLDAA---RRLIASMPVAPDAYTYTPII-------RGLCDRGRVGEA 164

Query: 137 TWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSY 196
             L  +M+  G +P V+TY  L+   C++     A+ +  +M +           NI +Y
Sbjct: 165 LSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKG------CTPNIVTY 218

Query: 197 SIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLD 256
           ++II+ +C+EG VD A+E    +   G  P  V  TT++ G C A  WE+V  LF EM++
Sbjct: 219 NVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMME 278

Query: 257 LGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDT 316
               PN +TF++++   C+GG +  A  +LE M   G   +    N +++  C  GR+D 
Sbjct: 279 KNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDD 338

Query: 317 AREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLS 376
           A +   +M S GC    +SY  ++ G C+    E+A  L ++++        +T+NT + 
Sbjct: 339 AFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFIC 398

Query: 377 GLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEF 436
            L Q G    A  L ++M  +  E ++ TYN L++G C    V  A++LF+ +       
Sbjct: 399 ILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCKPNTI 458

Query: 437 GIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFL 496
               +  L+ GLC A RLD A EL  ++ QK   P VVT+++++   C+KG +++A + +
Sbjct: 459 ---TYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELV 515

Query: 497 LYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLA 556
             M ++GC PN++T+NTL+ G   +  + + +ELLH +      + PD  T+S ++ +L+
Sbjct: 516 EQMMEHGCTPNLITYNTLLDGITNDCNSEEALELLHGLV--SNGVSPDIVTYSSIIGVLS 573

Query: 557 KDEKYHE 563
           ++++  E
Sbjct: 574 REDRVEE 580



 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 147/507 (28%), Positives = 255/507 (50%), Gaps = 29/507 (5%)

Query: 41  LNEFLHENCKSGIIN-------------LNEARYFFGYMTHMQPSPPISSFNLLFGAVAK 87
           L++ LH  C+  ++                +A      M     +P I ++N++   + +
Sbjct: 168 LDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCR 227

Query: 88  NRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFG 147
               D    F  +L S G  PD ++   ++       +GLC   R ++   LF  M+   
Sbjct: 228 EGRVDDAREFLNRLSSYGFQPDTVSYTTVL-------KGLCAAKRWEDVEELFAEMMEKN 280

Query: 148 VRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEG 207
             P+ +T+  L+  FCR G +  A+++ ++M SG   +G  + T + +  I+I+++CK+G
Sbjct: 281 CMPNEVTFDMLVRFFCRGGMVERAIQVLEQM-SG---HGCAANTTLCN--IVINTICKQG 334

Query: 208 LVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFN 267
            VD A +    M   G +P  +  TT++ G C A  WE+   L  EM+     PN +TFN
Sbjct: 335 RVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFN 394

Query: 268 VMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSK 327
             I  LC+ G I +A  L+E M + G   +  TYN+L++G+C+ GR+D+A E+F SM   
Sbjct: 395 TFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMP-- 452

Query: 328 GCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYA 387
            CK   ++Y  L+ G C    ++ A  L  +++       V+T+N L+S   Q G    A
Sbjct: 453 -CKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEA 511

Query: 388 QKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDG 447
            +L ++M  +   P+L TYN L+DG+  +   +EA++L H L  N     I  ++ +I  
Sbjct: 512 IELVEQMMEHGCTPNLITYNTLLDGITNDCNSEEALELLHGLVSNGVSPDIVTYSSIIGV 571

Query: 448 LCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPN 507
           L +  R++ A ++FH +   G+ P  V Y+ ++  LC++   + A DF  YM  NGC PN
Sbjct: 572 LSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPN 631

Query: 508 VVTFNTLMHGFLQNNKTSKVVELLHKM 534
            +T+ TL+ G    +   +  +LL ++
Sbjct: 632 ELTYITLIEGLANEDFLKETRDLLREL 658



 Score =  214 bits (546), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 141/495 (28%), Positives = 225/495 (45%), Gaps = 66/495 (13%)

Query: 125 RGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRL---------- 174
           R L   + + EA  L     + G  PDV     LI   CR G  S A R+          
Sbjct: 51  RRLIARDDLAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTA 110

Query: 175 -----HKKMVSG-------DYENGLISKTNI----FSYSIIIDSLCKEGLVDKAKELFLE 218
                +  +V+G       D    LI+   +    ++Y+ II  LC  G V +A  L  +
Sbjct: 111 VDVFAYNTLVAGYCRYGQLDAARRLIASMPVAPDAYTYTPIIRGLCDRGRVGEALSLLDD 170

Query: 219 MKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGK 278
           M  RG  P+VV  T L+   C +  + +   +  EM   G  PN++T+NV+I+ +C+ G+
Sbjct: 171 MLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGR 230

Query: 279 INEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSY-- 336
           +++A   L  +   G  PD  +Y +++ G C   R +   E+F  M  K C    V++  
Sbjct: 231 VDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDM 290

Query: 337 ---------------------------------NILINGYCKILNVEEAMSLYRQIISNG 363
                                            NI+IN  CK   V++A      + S G
Sbjct: 291 LVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYG 350

Query: 364 VRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAV 423
                I+Y T+L GL +A +   A++L  EM   N  P+  T+N  I  LC+   +++A 
Sbjct: 351 CSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQAT 410

Query: 424 KLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGL 483
            L   +  +  E  I  +N L++G C  GR+D+A ELF+ +P K   P  +TY+ ++ GL
Sbjct: 411 MLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCK---PNTITYTTLLTGL 467

Query: 484 CRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVP 543
           C   +L+ A + L  M +  CAPNVVTFN L+  F Q     + +EL+ +M   E    P
Sbjct: 468 CNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMM--EHGCTP 525

Query: 544 DDTTFSIVVDLLAKD 558
           +  T++ ++D +  D
Sbjct: 526 NLITYNTLLDGITND 540



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 88/316 (27%), Positives = 159/316 (50%), Gaps = 5/316 (1%)

Query: 258 GPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTA 317
           G  P++     +I  LC+ G+ ++A  +L    + G   D F YN+L+ GYC  G++D A
Sbjct: 73  GEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAA 132

Query: 318 REIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSG 377
           R +  SM      +T   Y  +I G C    V EA+SL   ++  G + +V+TY  LL  
Sbjct: 133 RRLIASMPVAPDAYT---YTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEA 189

Query: 378 LFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFG 437
           + ++   G A ++ DEM+     P++ TYN++I+G+C+   V +A +  + L    F+  
Sbjct: 190 VCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPD 249

Query: 438 IEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLL 497
              +  ++ GLC A R ++  ELF ++ +K  +P  VT+ +++   CR G +E+A   L 
Sbjct: 250 TVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLE 309

Query: 498 YMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAK 557
            M  +GCA N    N +++   +  +     + L+ M        PD  +++ V+  L +
Sbjct: 310 QMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMG--SYGCSPDTISYTTVLKGLCR 367

Query: 558 DEKYHECSAVSKSSYR 573
            E++ +   + K   R
Sbjct: 368 AERWEDAKELLKEMVR 383



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 84/342 (24%), Positives = 153/342 (44%), Gaps = 35/342 (10%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CK G   +++A  F   M     SP   S+  +   + +   ++      +++V     P
Sbjct: 331 CKQG--RVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPP 388

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           + +T N  I C       LC +  I++AT L + M   G   +++TY  L+NGFC  G +
Sbjct: 389 NEVTFNTFI-CI------LCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRV 441

Query: 169 SVALRL------------HKKMVSG-------DYENGLISK-------TNIFSYSIIIDS 202
             AL L            +  +++G       D    L+++        N+ ++++++  
Sbjct: 442 DSALELFYSMPCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSF 501

Query: 203 LCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPN 262
            C++GL+D+A EL  +M   G  P ++   TL+ G     N EE   L   ++  G  P+
Sbjct: 502 FCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITNDCNSEEALELLHGLVSNGVSPD 561

Query: 263 LLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFL 322
           ++T++ +I  L +  ++ EA  +  ++   G+ P    YN ++   C     D A + F 
Sbjct: 562 IVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFA 621

Query: 323 SMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGV 364
            M S GC    ++Y  LI G      ++E   L R++ S GV
Sbjct: 622 YMVSNGCMPNELTYITLIEGLANEDFLKETRDLLRELCSRGV 663



 Score = 83.2 bits (204), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 47/192 (24%), Positives = 89/192 (46%), Gaps = 5/192 (2%)

Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
           N  L  L        A +L D        PD+     LI  LC+     +A ++    E 
Sbjct: 47  NARLRRLIARDDLAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAER 106

Query: 432 NKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEK 491
           +     +  +N L+ G C+ G+LD A  L   +P   + P   TY+ +I GLC +G++ +
Sbjct: 107 SGTAVDVFAYNTLVAGYCRYGQLDAARRLIASMP---VAPDAYTYTPIIRGLCDRGRVGE 163

Query: 492 ANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIV 551
           A   L  M   GC P+VVT+  L+    ++    + +E+L +M    +   P+  T++++
Sbjct: 164 ALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMR--AKGCTPNIVTYNVI 221

Query: 552 VDLLAKDEKYHE 563
           ++ + ++ +  +
Sbjct: 222 INGMCREGRVDD 233



 Score = 47.8 bits (112), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 34/132 (25%), Positives = 57/132 (43%), Gaps = 12/132 (9%)

Query: 454 LDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNT 513
           L  A  L  +   +G  P V   + +I  LCR+G+   A   L   E++G A +V  +NT
Sbjct: 59  LAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNT 118

Query: 514 LMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHEC-SAVSKSSY 572
           L+ G+ +  +      L+  M      + PD  T++ ++  L    +  E  S +    +
Sbjct: 119 LVAGYCRYGQLDAARRLIASMP-----VAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLH 173

Query: 573 RACLYVTIFQPS 584
           R C      QPS
Sbjct: 174 RGC------QPS 179


>gi|147858101|emb|CAN78867.1| hypothetical protein VITISV_041982 [Vitis vinifera]
          Length = 962

 Score =  261 bits (667), Expect = 8e-67,   Method: Compositional matrix adjust.
 Identities = 166/512 (32%), Positives = 252/512 (49%), Gaps = 50/512 (9%)

Query: 77  SFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEA 136
           S N L   +AK    +   + Y+++++ G+ P  LT N LIN    K        +++EA
Sbjct: 207 SCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKK-------GKVREA 259

Query: 137 TWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSY 196
             +   +  + + PDV TY +LI G CR  NL +A  +  +MV    +       N  +Y
Sbjct: 260 ELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCD------PNSVTY 313

Query: 197 SIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLD 256
           S +I+ LC EG VD+A ++  EM  +GI P V   T  I   C   + EE   L   M  
Sbjct: 314 STLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKK 373

Query: 257 LGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDT 316
            G RPN+ T+  +I  L + GK+  A GL   M++ GL P+  TYN+L++  C+ GR  T
Sbjct: 374 RGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFST 433

Query: 317 AREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLS 376
           A +IF  M   G      +YN +I G C   ++E+AM L+ +++  G   TV+TYNTL++
Sbjct: 434 ALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLIN 493

Query: 377 GLFQAGQAGYAQKLFDEMKLYNVEPDLSTYN----------------------------- 407
           G    G    A +L D MK    EPD  TYN                             
Sbjct: 494 GYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNP 553

Query: 408 ------ILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELF 461
                  LIDG  K+  V  A+ L   +E       +E +N +I+GL K  R   A ++ 
Sbjct: 554 NPVSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGLSKENRFSEAEKIC 613

Query: 462 HKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQN 521
            K+ ++GL+P V+TY+ +I GLCR G+ + A      MEK  C PN+ T+++L++G  Q 
Sbjct: 614 DKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQE 673

Query: 522 NKTSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
            K  +   LL +M    + L PD+ TF+ ++D
Sbjct: 674 GKADEAEILLKEME--RKGLAPDEVTFTSLID 703



 Score =  244 bits (624), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 166/542 (30%), Positives = 262/542 (48%), Gaps = 58/542 (10%)

Query: 56  LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNI 115
           + EA      +     SP + ++  L     +NR+ D     + ++V  G  P+ +T + 
Sbjct: 256 VREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYST 315

Query: 116 LINCFGNKERGLCVENRIKEATWLFKNMIAFGV--------------------------- 148
           LIN       GLC E R+ EA  + + MI  G+                           
Sbjct: 316 LIN-------GLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELV 368

Query: 149 --------RPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIII 200
                   RP+V TY  LI+G  R G L VA+ L+ KM+    + GL+   N  +Y+ +I
Sbjct: 369 ARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKML----KEGLVP--NTVTYNALI 422

Query: 201 DSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPR 260
           + LC  G    A ++F  M+G G          +I G C  G+ E+   LF +ML +GP 
Sbjct: 423 NELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPL 482

Query: 261 PNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREI 320
           P ++T+N +I+     G +N A  LL+LM + G  PD +TYN L+ G+   G++++A   
Sbjct: 483 PTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFY 542

Query: 321 FLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQ 380
           F  M   G     VSY  LI+G+ K   V+ A+SL  ++   G    V +YN +++GL +
Sbjct: 543 FQEMVECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGLSK 602

Query: 381 AGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEI 440
             +   A+K+ D+M    + P++ TY  LIDGLC+N   Q A K+FH +E  K    +  
Sbjct: 603 ENRFSEAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYT 662

Query: 441 FNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYME 500
           ++ LI GLC+ G+ D A  L  ++ +KGL P  VT++ +I G    G+++ A   L  M 
Sbjct: 663 YSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMV 722

Query: 501 KNGCAPNVVTFNTLMHG-----FLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLL 555
             GC PN  T++ L+ G      L   K +   E ++  +  E+     D  F IV +LL
Sbjct: 723 DVGCKPNYRTYSVLLKGLQKECLLLEEKVAVQHEAVYSFSPHEK-----DVNFEIVSNLL 777

Query: 556 AK 557
           A+
Sbjct: 778 AR 779



 Score =  218 bits (556), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 147/494 (29%), Positives = 248/494 (50%), Gaps = 39/494 (7%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
           NE +   C  G  ++ +A   F  M  M P P + ++N L        + +        +
Sbjct: 454 NEIIKGLCLGG--DIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLM 511

Query: 102 VSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLING 161
              G  PD  T N L++ F           +++ A++ F+ M+  G+ P+ ++Y TLI+G
Sbjct: 512 KENGCEPDEWTYNELVSGFSKW-------GKLESASFYFQEMVECGLNPNPVSYTTLIDG 564

Query: 162 FCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKG 221
             + G + +AL L ++M        +    N+ SY+ +I+ L KE    +A+++  +M  
Sbjct: 565 HSKDGKVDIALSLLERM------EEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMAE 618

Query: 222 RGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINE 281
           +G+ P V+  TTLI G C  G  +    +F +M      PNL T++ +I  LC+ GK +E
Sbjct: 619 QGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADE 678

Query: 282 ANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILIN 341
           A  LL+ M ++GL PD  T+ SL+DG+ ++GRID A  +   M   GCK    +Y++L+ 
Sbjct: 679 AEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDVGCKPNYRTYSVLLK 738

Query: 342 GYCK-ILNVEEAMSLYRQ---------------IISN--------GVRQTVITYNTLLSG 377
           G  K  L +EE +++  +               I+SN        G   T+ TY+TL+SG
Sbjct: 739 GLQKECLLLEEKVAVQHEAVYSFSPHEKDVNFEIVSNLLARMSEIGCEPTLDTYSTLVSG 798

Query: 378 LFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFG 437
           L + G+   A++L  +MK     PD   Y  L+   CKN  V  A+K+FH +E   F+  
Sbjct: 799 LCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLH 858

Query: 438 IEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLL 497
           + I+  LI  LCKAG+++ A  LF  + +K      + +++++ GL ++G+L+     L 
Sbjct: 859 LSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLH 918

Query: 498 YMEKNGCAPNVVTF 511
            ME     PN+ T+
Sbjct: 919 IMESKNFTPNIQTY 932



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 123/398 (30%), Positives = 195/398 (48%), Gaps = 37/398 (9%)

Query: 198 IIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDL 257
           ++I +   E  + +  +   E+ G G   ++  C TL+         E    L+ +ML+ 
Sbjct: 175 LMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNS 234

Query: 258 GPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTA 317
           G +P+LLTFN +I+ L K GK+ EA  +L  + Q  L+PD FTY SL+ G+C    +D A
Sbjct: 235 GIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLA 294

Query: 318 REIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYN----- 372
             +F  M  +GC    V+Y+ LING C    V+EA+ +  ++I  G+  TV TY      
Sbjct: 295 FGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITA 354

Query: 373 ------------------------------TLLSGLFQAGQAGYAQKLFDEMKLYNVEPD 402
                                          L+SGL + G+   A  L+ +M    + P+
Sbjct: 355 LCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPN 414

Query: 403 LSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFH 462
             TYN LI+ LC       A+K+FH +E +      + +N +I GLC  G ++ A  LF 
Sbjct: 415 TVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFE 474

Query: 463 KLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNN 522
           K+ + G +PTVVTY+ +I+G   KG +  A   L  M++NGC P+  T+N L+ GF +  
Sbjct: 475 KMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWG 534

Query: 523 KTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEK 560
           K         +M E   N  P+  +++ ++D  +KD K
Sbjct: 535 KLESASFYFQEMVECGLN--PNPVSYTTLIDGHSKDGK 570



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 134/452 (29%), Positives = 209/452 (46%), Gaps = 41/452 (9%)

Query: 38  ETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISF 97
           E   NE +    K G   L  A ++F  M     +P   S+  L    +K+   D  +S 
Sbjct: 520 EWTYNELVSGFSKWG--KLESASFYFQEMVECGLNPNPVSYTTLIDGHSKDGKVDIALSL 577

Query: 98  YRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGT 157
             ++  +G  P+  + N +IN       GL  ENR  EA  +   M   G+ P+VITY T
Sbjct: 578 LERMEEMGCNPNVESYNAVIN-------GLSKENRFSEAEKICDKMAEQGLLPNVITYTT 630

Query: 158 LINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFL 217
           LI+G CR G    A ++   M             N+++YS +I  LC+EG  D+A+ L  
Sbjct: 631 LIDGLCRNGRTQFAFKIFHDMEKRK------CLPNLYTYSSLIYGLCQEGKADEAEILLK 684

Query: 218 EMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMI-----DC 272
           EM+ +G+ P  V  T+LI GF   G  +    L   M+D+G +PN  T++V++     +C
Sbjct: 685 EMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDVGCKPNYRTYSVLLKGLQKEC 744

Query: 273 LCKGGKI---NEA----------------NGLLELMIQRGLNPDRFTYNSLMDGYCLVGR 313
           L    K+   +EA                + LL  M + G  P   TY++L+ G C  GR
Sbjct: 745 LLLEEKVAVQHEAVYSFSPHEKDVNFEIVSNLLARMSEIGCEPTLDTYSTLVSGLCRKGR 804

Query: 314 IDTAREIFLSMHSKG-CKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYN 372
              A ++   M  +G C    + Y++LI  +CK L V+ A+ ++  I + G +  +  Y 
Sbjct: 805 FYEAEQLVKDMKERGFCPDREIYYSLLI-AHCKNLEVDHALKIFHSIEAKGFQLHLSIYR 863

Query: 373 TLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMN 432
            L+  L +AGQ   AQ LFD M       D   + +L+DGL K   +   +KL H++E  
Sbjct: 864 ALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIMESK 923

Query: 433 KFEFGIEIFNCLIDGLCKAGRLDNAWELFHKL 464
            F   I+ +  L   L + G+   +  L  KL
Sbjct: 924 NFTPNIQTYVILGRELSRIGKSIESEPLADKL 955


>gi|413937324|gb|AFW71875.1| hypothetical protein ZEAMMB73_225396 [Zea mays]
          Length = 818

 Score =  261 bits (667), Expect = 8e-67,   Method: Compositional matrix adjust.
 Identities = 159/529 (30%), Positives = 263/529 (49%), Gaps = 29/529 (5%)

Query: 37  PETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLF-GAVAKNRHYDAVI 95
           P    N  +   C  G ++  E R F      + PS  + ++N +  G     R  DA  
Sbjct: 186 PVVPCNILIKRLCSDGRVSDAE-RVFAA----LGPSATVVTYNTMVNGYCRAGRIEDA-- 238

Query: 96  SFYRKLVS-IGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVIT 154
              R+L++ +   PD  T N LI       R LCV  RI +A  +F +M+  G  P V+T
Sbjct: 239 ---RRLINGMPFPPDTFTFNPLI-------RALCVRGRIPDALAVFDDMLHRGCSPSVVT 288

Query: 155 YGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKE 214
           Y  L++  C+      A+ L  +M +   E       +I +Y+++I+++C EG VD+A  
Sbjct: 289 YSILLDATCKESGYRQAMALLDEMRAKGCE------PDIVTYNVLINAMCNEGDVDEALN 342

Query: 215 LFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLC 274
           +   +   G  P  V  T ++   C +  W+EV  L  EM      P+ +TFN ++  LC
Sbjct: 343 ILSNLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELLAEMTSNNCAPDEVTFNTIVTSLC 402

Query: 275 KGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVV 334
           + G ++ A  +++ M + G   D  TY+S++DG C VGR+D A E+   + S GCK   +
Sbjct: 403 QQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTI 462

Query: 335 SYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEM 394
           +Y  ++ G C     E A  L  +++ +      +T+NT+++ L Q G    A ++ ++M
Sbjct: 463 AYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNTVVASLCQKGLVDRAIRVVEQM 522

Query: 395 KLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRL 454
                 PD+ TYN +IDGLC  +C+ +A++L   L+    +  I  FN L+ GLC   R 
Sbjct: 523 SENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSCGCKPDIVTFNTLLKGLCGVDRW 582

Query: 455 DNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTL 514
           ++A +L   + +    P  +T++ +I  LC+KG L +A + L  M +NGC PN  T++ +
Sbjct: 583 EDAEQLMANMMRSNCPPDELTFNTVITSLCQKGLLTQAIETLKIMAENGCVPNSSTYSIV 642

Query: 515 MHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
           +   L+  K    +ELL  M     N  PD  T++ V+  L K  K  E
Sbjct: 643 VDALLKAGKAQAALELLSGMT----NGTPDLITYNTVISNLTKAGKMEE 687



 Score =  221 bits (564), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 147/544 (27%), Positives = 238/544 (43%), Gaps = 70/544 (12%)

Query: 37  PET-QLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVI 95
           P+T   N  +   C  G I   +A   F  M H   SP + ++++L  A  K   Y   +
Sbjct: 249 PDTFTFNPLIRALCVRGRIP--DALAVFDDMLHRGCSPSVVTYSILLDATCKESGYRQAM 306

Query: 96  SFYRKLVSIGLLPDFLTLNILINCFGNKE----------------------------RGL 127
           +   ++ + G  PD +T N+LIN   N+                             + L
Sbjct: 307 ALLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSNLPSHGCKPDAVTYTPVLKSL 366

Query: 128 CVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGL 187
           C   R KE   L   M +    PD +T+ T++   C+ G +  A+ +   M     E+G 
Sbjct: 367 CGSERWKEVEELLAEMTSNNCAPDEVTFNTIVTSLCQQGLVDRAIEVVDHM----SEHGC 422

Query: 188 ISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEV 247
           ++  +I +YS I+D LC  G VD A EL   +K  G  P  +  TT++ G C    WE  
Sbjct: 423 VA--DIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSTEQWERA 480

Query: 248 NGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDG 307
             L  EML     P+ +TFN ++  LC+ G ++ A  ++E M + G +PD  TYN ++DG
Sbjct: 481 EELMAEMLCSDCPPDEVTFNTVVASLCQKGLVDRAIRVVEQMSENGCSPDIVTYNCIIDG 540

Query: 308 YCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQT 367
            C    ID A E+   + S GCK  +V++N L+ G C +   E+A  L   ++ +     
Sbjct: 541 LCNESCIDDAMELLSDLQSCGCKPDIVTFNTLLKGLCGVDRWEDAEQLMANMMRSNCPPD 600

Query: 368 VITYNTLLSGLFQAG--------------------------------QAGYAQKLFDEMK 395
            +T+NT+++ L Q G                                +AG AQ   + + 
Sbjct: 601 ELTFNTVITSLCQKGLLTQAIETLKIMAENGCVPNSSTYSIVVDALLKAGKAQAALELLS 660

Query: 396 -LYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRL 454
            + N  PDL TYN +I  L K   ++EA+ L  ++  N        +  L  G+C+    
Sbjct: 661 GMTNGTPDLITYNTVISNLTKAGKMEEALDLLRVMVSNGLCPDTTTYRSLAYGVCREDGT 720

Query: 455 DNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTL 514
           D A  +  ++   GL P    Y+ ++ G CR  + + A D   +M  +GC P+  T+  L
Sbjct: 721 DRAVRMLRRVQDTGLSPDTTFYNDVLLGFCRDRRTDLAIDCFAHMVSSGCMPDESTYVIL 780

Query: 515 MHGF 518
           +   
Sbjct: 781 LEAL 784



 Score =  179 bits (453), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 112/439 (25%), Positives = 203/439 (46%), Gaps = 15/439 (3%)

Query: 58  EARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILI 117
           E       MT    +P   +FN +  ++ +    D  I     +   G + D +T + ++
Sbjct: 374 EVEELLAEMTSNNCAPDEVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSIL 433

Query: 118 NCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKK 177
           +       GLC   R+ +A  L   + ++G +PD I Y T++ G C T     A  L  +
Sbjct: 434 D-------GLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSTEQWERAEELMAE 486

Query: 178 MVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHG 237
           M+  D         +  +++ ++ SLC++GLVD+A  +  +M   G +P +V    +I G
Sbjct: 487 MLCSD------CPPDEVTFNTVVASLCQKGLVDRAIRVVEQMSENGCSPDIVTYNCIIDG 540

Query: 238 FCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPD 297
            C     ++   L  ++   G +P+++TFN ++  LC   +  +A  L+  M++    PD
Sbjct: 541 LCNESCIDDAMELLSDLQSCGCKPDIVTFNTLLKGLCGVDRWEDAEQLMANMMRSNCPPD 600

Query: 298 RFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYR 357
             T+N+++   C  G +  A E    M   GC     +Y+I+++   K    + A+ L  
Sbjct: 601 ELTFNTVITSLCQKGLLTQAIETLKIMAENGCVPNSSTYSIVVDALLKAGKAQAALELLS 660

Query: 358 QIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNN 417
            + +NG    +ITYNT++S L +AG+   A  L   M    + PD +TY  L  G+C+ +
Sbjct: 661 GM-TNGTPD-LITYNTVISNLTKAGKMEEALDLLRVMVSNGLCPDTTTYRSLAYGVCRED 718

Query: 418 CVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYS 477
               AV++   ++          +N ++ G C+  R D A + F  +   G +P   TY 
Sbjct: 719 GTDRAVRMLRRVQDTGLSPDTTFYNDVLLGFCRDRRTDLAIDCFAHMVSSGCMPDESTYV 778

Query: 478 IMIHGLCRKGKLEKANDFL 496
           I++  L   G L++A   L
Sbjct: 779 ILLEALAYGGLLDEAKRLL 797



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 92/347 (26%), Positives = 164/347 (47%), Gaps = 33/347 (9%)

Query: 242 GNWEEVNGLFIEMLDLGPR--PNLLTFNVMIDCLCKGGKINEANGLLELM---------- 289
           G  +E   LF  M   G R  P ++  N++I  LC  G++++A  +   +          
Sbjct: 164 GEIDEALVLFDSMASGGGRNCPPVVPCNILIKRLCSDGRVSDAERVFAALGPSATVVTYN 223

Query: 290 --------------IQRGLN-----PDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCK 330
                          +R +N     PD FT+N L+   C+ GRI  A  +F  M  +GC 
Sbjct: 224 TMVNGYCRAGRIEDARRLINGMPFPPDTFTFNPLIRALCVRGRIPDALAVFDDMLHRGCS 283

Query: 331 HTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKL 390
            +VV+Y+IL++  CK     +AM+L  ++ + G    ++TYN L++ +   G    A  +
Sbjct: 284 PSVVTYSILLDATCKESGYRQAMALLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNI 343

Query: 391 FDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCK 450
              +  +  +PD  TY  ++  LC +   +E  +L   +  N        FN ++  LC+
Sbjct: 344 LSNLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELLAEMTSNNCAPDEVTFNTIVTSLCQ 403

Query: 451 AGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVT 510
            G +D A E+   + + G V  +VTYS ++ GLC  G+++ A + L  ++  GC P+ + 
Sbjct: 404 QGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIA 463

Query: 511 FNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAK 557
           + T++ G     +  +  EL+ +M     +  PD+ TF+ VV  L +
Sbjct: 464 YTTVLKGLCSTEQWERAEELMAEML--CSDCPPDEVTFNTVVASLCQ 508



 Score = 85.5 bits (210), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 57/223 (25%), Positives = 96/223 (43%), Gaps = 39/223 (17%)

Query: 375 LSGLFQAGQAGYAQKLFDEMKLYNVE--PDLSTYNILIDGLCKNNCVQEAVKLFHMLEMN 432
           L  L Q G+   A  LFD M        P +   NILI  LC +  V +A ++F  L  +
Sbjct: 157 LRSLVQRGEIDEALVLFDSMASGGGRNCPPVVPCNILIKRLCSDGRVSDAERVFAALGPS 216

Query: 433 KFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLP--------------------------- 465
                +  +N +++G C+AGR+++A  L + +P                           
Sbjct: 217 AT---VVTYNTMVNGYCRAGRIEDARRLINGMPFPPDTFTFNPLIRALCVRGRIPDALAV 273

Query: 466 -----QKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQ 520
                 +G  P+VVTYSI++   C++    +A   L  M   GC P++VT+N L++    
Sbjct: 274 FDDMLHRGCSPSVVTYSILLDATCKESGYRQAMALLDEMRAKGCEPDIVTYNVLINAMCN 333

Query: 521 NNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
                + + +L  +  P     PD  T++ V+  L   E++ E
Sbjct: 334 EGDVDEALNILSNL--PSHGCKPDAVTYTPVLKSLCGSERWKE 374


>gi|302769173|ref|XP_002968006.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
 gi|300164744|gb|EFJ31353.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
          Length = 737

 Score =  261 bits (666), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 151/481 (31%), Positives = 248/481 (51%), Gaps = 37/481 (7%)

Query: 111 LTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSV 170
            T N L++ F  K++        +EA  LFKN       PD ITY TLINGFC+  +   
Sbjct: 133 FTCNCLLSAFVRKKKA-------QEAYDLFKNHRCGLCSPDSITYSTLINGFCKARDFQQ 185

Query: 171 ALRLHKKM---------------VSGDYENGLISKT-------------NIFSYSIIIDS 202
           A RL  +M               + G  +NG +                ++ +Y+I++D+
Sbjct: 186 AYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQRNCAPSVITYTILVDA 245

Query: 203 LCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPN 262
           LCK   +  A  +  +M   G  P VV   TLI+GFC  GN +E   LF +ML+    P+
Sbjct: 246 LCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPD 305

Query: 263 LLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFL 322
           + T+N++ID  CK  +  +   LL+ M++ G  P+  TYN+LMD     G+   A  +  
Sbjct: 306 VFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQ 365

Query: 323 SMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAG 382
            M  + CK +  ++N++I+ +CK+  ++ A  L++ +   G    + TYN ++SG  +A 
Sbjct: 366 MMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRAN 425

Query: 383 QAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFN 442
           +   A++L + M      PD+ TYN ++ GLCK + V EA +++ +L    +   +   +
Sbjct: 426 RIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCS 485

Query: 443 CLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKN 502
            LIDGLCK+ RLD+A +L  ++ + G  P VV Y+I+IHG C+  +L+K+  F   M   
Sbjct: 486 TLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDK 545

Query: 503 GCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYH 562
           GC P V+T++ ++    ++ +      LL  M   ER + PD   ++ V+D L K + Y 
Sbjct: 546 GCVPTVITYSIVIDKLCKSARVRDGCMLLKTML--ERGVTPDAIVYTSVIDGLCKSDSYD 603

Query: 563 E 563
           E
Sbjct: 604 E 604



 Score =  251 bits (641), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 160/549 (29%), Positives = 262/549 (47%), Gaps = 58/549 (10%)

Query: 55  NLNEARYFFGYMTHMQPSPPISSF--NLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLT 112
           +L++A  FF + T  QP    S F  N L  A  + +        ++        PD +T
Sbjct: 111 DLDKAVKFFDWCTG-QPGYKHSKFTCNCLLSAFVRKKKAQEAYDLFKNHRCGLCSPDSIT 169

Query: 113 LNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVAL 172
            + LIN       G C     ++A  L   M   G+ P    Y T+I G C  G +  AL
Sbjct: 170 YSTLIN-------GFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSAL 222

Query: 173 RLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCT 232
             ++ M             ++ +Y+I++D+LCK   +  A  +  +M   G  P VV   
Sbjct: 223 VHYRDMQRN-------CAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYN 275

Query: 233 TLIHGFCCAGNWEEVNGLFIEMLD-----------------------------------L 257
           TLI+GFC  GN +E   LF +ML+                                    
Sbjct: 276 TLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKY 335

Query: 258 GPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTA 317
           G  PN +T+N ++D L K GK  +A  L ++M++R   P  FT+N ++D +C VG++D A
Sbjct: 336 GCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLA 395

Query: 318 REIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSG 377
            E+F  M  +GC   + +YNI+I+G C+   +++A  L  ++   G    V+TYN+++SG
Sbjct: 396 YELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSG 455

Query: 378 LFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFG 437
           L +A Q   A ++++ ++      D+ T + LIDGLCK+  + +A KL   +E N     
Sbjct: 456 LCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPD 515

Query: 438 IEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLL 497
           +  +  LI G CKA +LD +   F ++  KG VPTV+TYSI+I  LC+  ++      L 
Sbjct: 516 VVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLK 575

Query: 498 YMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAK 557
            M + G  P+ + + +++ G  +++   +  EL   M   +    P   T++++VD L K
Sbjct: 576 TMLERGVTPDAIVYTSVIDGLCKSDSYDEAYELYKLMK--QTGCAPTVVTYNVLVDKLCK 633

Query: 558 ----DEKYH 562
               DE  H
Sbjct: 634 VSRLDEAIH 642



 Score =  241 bits (616), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 138/496 (27%), Positives = 244/496 (49%), Gaps = 15/496 (3%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CKS  I+  +A      M     +P + ++N L     K  + D  +  + +++     P
Sbjct: 247 CKSARIS--DASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSP 304

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           D  T NILI+       G C + R ++   L + M+ +G  P+ ITY TL++   ++G  
Sbjct: 305 DVFTYNILID-------GYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKY 357

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
             A  L + M+  D       K + F+++++ID  CK G +D A ELF  M  RG  P +
Sbjct: 358 IDAFNLAQMMLRRD------CKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDI 411

Query: 229 VVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLEL 288
                +I G C A   ++   L   M + G  P+++T+N ++  LCK  +++EA  + E+
Sbjct: 412 YTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEV 471

Query: 289 MIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILN 348
           +   G   D  T ++L+DG C   R+D A ++   M   G    VV+Y ILI+G+CK   
Sbjct: 472 LRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQ 531

Query: 349 VEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNI 408
           ++++++ + +++  G   TVITY+ ++  L ++ +      L   M    V PD   Y  
Sbjct: 532 LDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGVTPDAIVYTS 591

Query: 409 LIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKG 468
           +IDGLCK++   EA +L+ +++       +  +N L+D LCK  RLD A  L   +   G
Sbjct: 592 VIDGLCKSDSYDEAYELYKLMKQTGCAPTVVTYNVLVDKLCKVSRLDEAIHLLEVMESDG 651

Query: 469 LVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVV 528
            +P  VTY+ +  G  +  + +KA      M+  GC+P    ++ L+   +   K  + +
Sbjct: 652 CLPDTVTYNSVFDGFWKSAEHDKAFRLFQAMKSRGCSPTPFMYSLLLTKLVAEEKMDQAM 711

Query: 529 ELLHKMAEPERNLVPD 544
           E+  +  E   ++ P+
Sbjct: 712 EIWEEALEAGADVDPE 727



 Score =  204 bits (520), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 126/443 (28%), Positives = 213/443 (48%), Gaps = 71/443 (16%)

Query: 190 KTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNG 249
           K + F+ + ++ +  ++    +A +LF   +    +P  +  +TLI+GFC A ++++   
Sbjct: 129 KHSKFTCNCLLSAFVRKKKAQEAYDLFKNHRCGLCSPDSITYSTLINGFCKARDFQQAYR 188

Query: 250 LFIEMLDLG--PR--------------------------------PNLLTFNVMIDCLCK 275
           L  EM   G  P                                 P+++T+ +++D LCK
Sbjct: 189 LLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQRNCAPSVITYTILVDALCK 248

Query: 276 GGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVS 335
             +I++A+ +LE MI+ G  P+  TYN+L++G+C +G +D A  +F  M    C   V +
Sbjct: 249 SARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFT 308

Query: 336 YNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQA-------------- 381
           YNILI+GYCK    ++   L ++++  G     ITYNTL+  L ++              
Sbjct: 309 YNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMML 368

Query: 382 ---------------------GQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQ 420
                                GQ   A +LF  M      PD+ TYNI+I G C+ N + 
Sbjct: 369 RRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRID 428

Query: 421 EAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMI 480
           +A +L   +        +  +N ++ GLCKA ++D A+E++  L   G    VVT S +I
Sbjct: 429 DARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLI 488

Query: 481 HGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERN 540
            GLC+  +L+ A   L  ME+NG AP+VV +  L+HGF + ++  K +    +M   ++ 
Sbjct: 489 DGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEML--DKG 546

Query: 541 LVPDDTTFSIVVDLLAKDEKYHE 563
            VP   T+SIV+D L K  +  +
Sbjct: 547 CVPTVITYSIVIDKLCKSARVRD 569



 Score = 66.2 bits (160), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 35/126 (27%), Positives = 59/126 (46%), Gaps = 3/126 (2%)

Query: 442 NCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEK 501
           NCL+    +  +   A++LF         P  +TYS +I+G C+    ++A   L  MEK
Sbjct: 136 NCLLSAFVRKKKAQEAYDLFKNHRCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEK 195

Query: 502 NGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKY 561
            G  P+   +NT++ G   N +    +     M   +RN  P   T++I+VD L K  + 
Sbjct: 196 RGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDM---QRNCAPSVITYTILVDALCKSARI 252

Query: 562 HECSAV 567
            + S +
Sbjct: 253 SDASLI 258



 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 40/159 (25%), Positives = 72/159 (45%), Gaps = 15/159 (9%)

Query: 72  SPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVEN 131
           +P    +  +   + K+  YD     Y+ +   G  P  +T N+L++        LC  +
Sbjct: 583 TPDAIVYTSVIDGLCKSDSYDEAYELYKLMKQTGCAPTVVTYNVLVD-------KLCKVS 635

Query: 132 RIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKT 191
           R+ EA  L + M + G  PD +TY ++ +GF ++     A RL + M S           
Sbjct: 636 RLDEAIHLLEVMESDGCLPDTVTYNSVFDGFWKSAEHDKAFRLFQAMKSRG------CSP 689

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEM--KGRGINPAV 228
             F YS+++  L  E  +D+A E++ E    G  ++P +
Sbjct: 690 TPFMYSLLLTKLVAEEKMDQAMEIWEEALEAGADVDPEI 728


>gi|224103961|ref|XP_002313262.1| predicted protein [Populus trichocarpa]
 gi|222849670|gb|EEE87217.1| predicted protein [Populus trichocarpa]
          Length = 559

 Score =  260 bits (664), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 152/424 (35%), Positives = 234/424 (55%), Gaps = 14/424 (3%)

Query: 143 MIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDS 202
           M    + PD+++Y T+ING C+   L  A+ L  +M       G   + N F+Y I++D 
Sbjct: 1   MKRINILPDIVSYNTIINGLCKEKRLEKAVDLLVEM------EGSSCEPNSFTYCILMDG 54

Query: 203 LCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPN 262
           LCKEG V++A  L  EMK +G+   VVV +TLI GFC  G  +    LF EML+ G  PN
Sbjct: 55  LCKEGRVEEAMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPN 114

Query: 263 LLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFL 322
           ++ ++ +I+  CK G   EA  +L  M +RG+ PD +TY  ++ G C  GR   A ++F 
Sbjct: 115 VVVYSCLINGFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFD 174

Query: 323 SMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAG 382
            M  KG + + V+YN+LING CK   + +A  ++  ++  G R  V++YNTL+ GL   G
Sbjct: 175 LMTEKGEEPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNG 234

Query: 383 QAGYAQKLFDEMKLYN--VEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEI 440
           +   A KLF  +      VEPD+ T+N +I GLCK   + +AV+++  + + +  FG  +
Sbjct: 235 KLDEAMKLFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTM-IERGSFG-NL 292

Query: 441 FNC--LIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLY 498
           F C  LI    K+G +D A EL+ ++ + GLVP+  TYS+MI G C+   L  A      
Sbjct: 293 FTCHILIGEYIKSGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSR 352

Query: 499 MEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKD 558
           M+ +G +P +  +NTLM    + +   +   L  +M E   N  PD  +F+I++D   K 
Sbjct: 353 MKISGLSPTLFDYNTLMASLCKESSLEQARRLFQEMKES--NCEPDTISFNIMIDGTLKA 410

Query: 559 EKYH 562
              H
Sbjct: 411 GDIH 414



 Score =  256 bits (653), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 155/469 (33%), Positives = 247/469 (52%), Gaps = 17/469 (3%)

Query: 104 IGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFC 163
           I +LPD ++ N +IN       GLC E R+++A  L   M      P+  TY  L++G C
Sbjct: 4   INILPDIVSYNTIIN-------GLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLC 56

Query: 164 RTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRG 223
           + G +  A+RL  +M     E       ++  YS +I   C +G +D+ K LF EM  +G
Sbjct: 57  KEGRVEEAMRLLGEMKRKGLE------VDVVVYSTLISGFCSKGCLDRGKALFDEMLEKG 110

Query: 224 INPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEAN 283
           I+P VVV + LI+GFC  G W E   +   M + G +P++ T+  MI  LCK G+  +A 
Sbjct: 111 ISPNVVVYSCLINGFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKAL 170

Query: 284 GLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGY 343
            L +LM ++G  P   TYN L++G C  G I  A +IF +M  KG +  VVSYN LI G 
Sbjct: 171 DLFDLMTEKGEEPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGL 230

Query: 344 CKILNVEEAMSLYRQIISNG--VRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEP 401
           C    ++EAM L+  ++ +G  V   VIT+NT++ GL + G+   A +++D M       
Sbjct: 231 CNNGKLDEAMKLFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFG 290

Query: 402 DLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELF 461
           +L T +ILI    K+  + +A++L+  +           ++ +IDG CK   L+ A  LF
Sbjct: 291 NLFTCHILIGEYIKSGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLF 350

Query: 462 HKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQN 521
            ++   GL PT+  Y+ ++  LC++  LE+A      M+++ C P+ ++FN ++ G L+ 
Sbjct: 351 SRMKISGLSPTLFDYNTLMASLCKESSLEQARRLFQEMKESNCEPDTISFNIMIDGTLKA 410

Query: 522 NKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKS 570
                  ELL+ M   +  L PD  T+S  ++ L+K  +  E      S
Sbjct: 411 GDIHSAKELLNDMQ--QMGLTPDAYTYSSFINRLSKLGQMEEAKGAFDS 457



 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 151/508 (29%), Positives = 250/508 (49%), Gaps = 50/508 (9%)

Query: 66  MTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKER 125
           M  +   P I S+N +   + K +  +  +    ++      P+  T  IL++       
Sbjct: 1   MKRINILPDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMD------- 53

Query: 126 GLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYEN 185
           GLC E R++EA  L   M   G+  DV+ Y TLI+GFC  G L     L  +M+    E 
Sbjct: 54  GLCKEGRVEEAMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEML----EK 109

Query: 186 GLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWE 245
           G+    N+  YS +I+  CK+GL  +A  +   M  RGI P V   T +I G C  G   
Sbjct: 110 GI--SPNVVVYSCLINGFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRAR 167

Query: 246 EVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRG------------ 293
           +   LF  M + G  P+ +T+NV+I+ LCK G I +A  + E M+++G            
Sbjct: 168 KALDLFDLMTEKGEEPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLI 227

Query: 294 -------------------------LNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKG 328
                                    + PD  T+N+++ G C  GR+D A EI+ +M  +G
Sbjct: 228 MGLCNNGKLDEAMKLFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERG 287

Query: 329 CKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQ 388
               + + +ILI  Y K   +++AM L++++   G+  +  TY+ ++ G  +     +A+
Sbjct: 288 SFGNLFTCHILIGEYIKSGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAK 347

Query: 389 KLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGL 448
            LF  MK+  + P L  YN L+  LCK + +++A +LF  ++ +  E     FN +IDG 
Sbjct: 348 GLFSRMKISGLSPTLFDYNTLMASLCKESSLEQARRLFQEMKESNCEPDTISFNIMIDGT 407

Query: 449 CKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNV 508
            KAG + +A EL + + Q GL P   TYS  I+ L + G++E+A      M  +G  P+ 
Sbjct: 408 LKAGDIHSAKELLNDMQQMGLTPDAYTYSSFINRLSKLGQMEEAKGAFDSMIASGITPDN 467

Query: 509 VTFNTLMHGFLQNNKTSKVVELLHKMAE 536
             +++L+ GF  N++  +V+ LL +MA+
Sbjct: 468 HVYDSLIKGFGLNDEIEEVINLLRQMAD 495



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 92/299 (30%), Positives = 156/299 (52%), Gaps = 9/299 (3%)

Query: 296 PDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSL 355
           PD  +YN++++G C   R++ A ++ + M    C+    +Y IL++G CK   VEEAM L
Sbjct: 8   PDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGRVEEAMRL 67

Query: 356 YRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCK 415
             ++   G+   V+ Y+TL+SG    G     + LFDEM    + P++  Y+ LI+G CK
Sbjct: 68  LGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSCLINGFCK 127

Query: 416 NNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVT 475
               +EA  + H +     +  +  + C+I GLCK GR   A +LF  + +KG  P+ VT
Sbjct: 128 KGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGEEPSTVT 187

Query: 476 YSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMA 535
           Y+++I+GLC++G +  A      M + G    VV++NTL+ G   N K  + ++L   + 
Sbjct: 188 YNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAMKLFSSLL 247

Query: 536 EPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKSSYRACLYVTIFQPSSLGSMIGCTV 594
           E    + PD  TF+ V+  L K+ +  +   +         Y T+ +  S G++  C +
Sbjct: 248 EDGNYVEPDVITFNTVIQGLCKEGRLDKAVEI---------YDTMIERGSFGNLFTCHI 297



 Score = 55.5 bits (132), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 60/259 (23%), Positives = 94/259 (36%), Gaps = 51/259 (19%)

Query: 20  KLSSLFKSPRQIAAVSSPETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFN 79
           K   L+K   ++  V S  T  +  +   CK  ++N   A+  F  M     SP +  +N
Sbjct: 310 KAMELWKRVHKLGLVPSS-TTYSVMIDGFCKMHMLNF--AKGLFSRMKISGLSPTLFDYN 366

Query: 80  LLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWL 139
            L  ++ K    +     ++++      PD ++ NI+I+       G      I  A  L
Sbjct: 367 TLMASLCKESSLEQARRLFQEMKESNCEPDTISFNIMID-------GTLKAGDIHSAKEL 419

Query: 140 FKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSII 199
             +M   G+ PD  TY + IN                                       
Sbjct: 420 LNDMQQMGLTPDAYTYSSFIN--------------------------------------- 440

Query: 200 IDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGP 259
              L K G +++AK  F  M   GI P   V  +LI GF      EEV  L  +M D+G 
Sbjct: 441 --RLSKLGQMEEAKGAFDSMIASGITPDNHVYDSLIKGFGLNDEIEEVINLLRQMADMGV 498

Query: 260 RPNLLTFNVMIDCLCKGGK 278
             +L   N ++  LC   +
Sbjct: 499 ILDLEITNSILTFLCNSAE 517


>gi|223635627|sp|Q9SZ20.2|PP339_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g26800
          Length = 514

 Score =  259 bits (663), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 158/474 (33%), Positives = 257/474 (54%), Gaps = 22/474 (4%)

Query: 46  HENCKSGI--INLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVS 103
            E  +SG+  I  ++A + F  M +  P P I  FN +  A+AK + YD VI+ ++++ +
Sbjct: 54  REVLRSGLHNIKFDDAFHLFVLMAYSYPLPSIVEFNKVLTAIAKMQMYDVVINLWKRIEN 113

Query: 104 ---IGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLIN 160
              I + PD  T NIL+NCF       C   +   A      M+  G+ PD++T  +L+N
Sbjct: 114 AEGIEISPDLYTCNILVNCF-------CRCFQPSSALSYLGKMMKLGIEPDIVTASSLVN 166

Query: 161 GFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMK 220
           GFC + ++  A+      V+G  E   I K ++   +I+ID+LCK  LV  A E+   MK
Sbjct: 167 GFCLSNSIKDAV-----YVAGQMEKMGI-KRDVVVDTILIDTLCKNRLVVPALEVLKRMK 220

Query: 221 GRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKIN 280
            RGI+P VV  ++LI G C +G   +      EM      PN++TF+ +ID   K GK++
Sbjct: 221 DRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLS 280

Query: 281 EANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILI 340
           + + + ++MIQ  ++P+ FTY+SL+ G C+  R+D A ++   M SKGC   VV+Y+ L 
Sbjct: 281 KVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLA 340

Query: 341 NGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVE 400
           NG+ K   V++ + L   +   GV    ++ NTL+ G FQAG+   A  +F  M    + 
Sbjct: 341 NGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLI 400

Query: 401 PDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWEL 460
           P++ +YNI++ GL  N  V++A+  F  ++  + +  I  +  +I G+CKA  +  A++L
Sbjct: 401 PNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIHGMCKACMVKEAYDL 460

Query: 461 FHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEK----NGCAPNVVT 510
           F+KL  K + P    Y+IMI  L R G   +A+    + +K    N  AP  V+
Sbjct: 461 FYKLKFKRVEPDFKAYTIMIAELNRAGMRTEADALNRFYQKHVRQNESAPAEVS 514



 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 102/420 (24%), Positives = 212/420 (50%), Gaps = 5/420 (1%)

Query: 150 PDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLV 209
           P ++ +  ++    +     V + L K++ + +   G+    ++++ +I+++  C+    
Sbjct: 83  PSIVEFNKVLTAIAKMQMYDVVINLWKRIENAE---GIEISPDLYTCNILVNCFCRCFQP 139

Query: 210 DKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVM 269
             A     +M   GI P +V  ++L++GFC + + ++   +  +M  +G + +++   ++
Sbjct: 140 SSALSYLGKMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTIL 199

Query: 270 IDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGC 329
           ID LCK   +  A  +L+ M  RG++P+  TY+SL+ G C  GR+  A      M SK  
Sbjct: 200 IDTLCKNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKI 259

Query: 330 KHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQK 389
              V++++ LI+ Y K   + +  S+Y+ +I   +   V TY++L+ GL    +   A K
Sbjct: 260 NPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIK 319

Query: 390 LFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLC 449
           + D M      P++ TY+ L +G  K++ V + +KL   +            N LI G  
Sbjct: 320 MLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYF 379

Query: 450 KAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVV 509
           +AG++D A  +F  +   GL+P + +Y+I++ GL   G++EKA     +M+K     +++
Sbjct: 380 QAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDII 439

Query: 510 TFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSK 569
           T+  ++HG  +     +  +L +K+    + + PD   ++I++  L +     E  A+++
Sbjct: 440 TYTIMIHGMCKACMVKEAYDLFYKL--KFKRVEPDFKAYTIMIAELNRAGMRTEADALNR 497



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 62/260 (23%), Positives = 126/260 (48%), Gaps = 9/260 (3%)

Query: 332 TVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLF 391
           T + Y  ++      +  ++A  L+  +  +    +++ +N +L+ + +         L+
Sbjct: 49  TTIDYREVLRSGLHNIKFDDAFHLFVLMAYSYPLPSIVEFNKVLTAIAKMQMYDVVINLW 108

Query: 392 DEMKL---YNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKF--EFGIEIFNCLID 446
             ++      + PDL T NIL++  C+  C Q +  L ++ +M K   E  I   + L++
Sbjct: 109 KRIENAEGIEISPDLYTCNILVNCFCR--CFQPSSALSYLGKMMKLGIEPDIVTASSLVN 166

Query: 447 GLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAP 506
           G C +  + +A  +  ++ + G+   VV  +I+I  LC+   +  A + L  M+  G +P
Sbjct: 167 GFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPALEVLKRMKDRGISP 226

Query: 507 NVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSA 566
           NVVT+++L+ G  ++ + +     LH+M   + N  P+  TFS ++D  AK  K  +  +
Sbjct: 227 NVVTYSSLITGLCKSGRLADAERRLHEMDSKKIN--PNVITFSALIDAYAKRGKLSKVDS 284

Query: 567 VSKSSYRACLYVTIFQPSSL 586
           V K   +  +   +F  SSL
Sbjct: 285 VYKMMIQMSIDPNVFTYSSL 304


>gi|242054609|ref|XP_002456450.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
 gi|241928425|gb|EES01570.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
          Length = 669

 Score =  259 bits (662), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 148/488 (30%), Positives = 252/488 (51%), Gaps = 23/488 (4%)

Query: 77  SFNLLFGAVAKNRHYDAVISFYRKLV-SIGLLPDFLTLNILINCFGNKERGLCVENRIKE 135
           ++N L     +  H DA     R+L+ S+ + PD  T   LI       R LC   R+ +
Sbjct: 113 AYNTLVAGYCRYGHLDAA----RRLIGSMPVAPDAYTYTPLI-------RVLCDRGRVAD 161

Query: 136 ATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFS 195
           A  L  +M+  G +P+V+TY  L+   CR      A+ +  +M +           NI +
Sbjct: 162 ALSLLDDMLRRGCQPNVVTYTVLLEAMCRNSGFEQAMAVLDEMRAKG------CTPNIVT 215

Query: 196 YSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEML 255
           Y++II+ +C+EG VD A+EL   +   G  P  V  TTL+ G C +  W++V  LF EM+
Sbjct: 216 YNVIINGMCREGRVDDARELLNRLPSYGFQPDTVSYTTLLKGLCASKRWDDVEELFAEMM 275

Query: 256 DLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRID 315
           +    PN +TF+++I   C+GG +  A  +LE M + G   +    N +++  C  GR+D
Sbjct: 276 EKNCMPNEVTFDMLIRFFCRGGMVERAIQVLEQMTEHGCATNTTLCNIVINSICKQGRVD 335

Query: 316 TAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLL 375
            A ++   M S GC    +SY  ++ G C+    ++A  L  +++ N      +T+NT +
Sbjct: 336 DAFKLLNDMGSYGCNPDTISYTTVLKGLCRAERWDDAKELLNEMVRNNCPPNEVTFNTFI 395

Query: 376 SGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFE 435
             L Q G    A  L ++M  +     + TYN L++G C    +  A++LF  +      
Sbjct: 396 CILCQKGLIEQAIMLIEQMSEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSMPCKPNT 455

Query: 436 FGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDF 495
                +  L+ GLC A RLD A EL  ++ +    P VVT+++++   C+KG LE+A + 
Sbjct: 456 I---TYTTLLTGLCNAERLDGAAELVAEMLRGDCPPNVVTFNVLVSFFCQKGFLEEAIEL 512

Query: 496 LLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLL 555
           +  M ++GC PN++T+NTL+ G  ++  +   +ELLH +    + + PD  TFS ++ +L
Sbjct: 513 VEQMMEHGCTPNLITYNTLLDGITKDCSSEDALELLHGLVS--KGVSPDVITFSSIIGIL 570

Query: 556 AKDEKYHE 563
           +K+++  E
Sbjct: 571 SKEDRIEE 578



 Score =  243 bits (620), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 144/460 (31%), Positives = 238/460 (51%), Gaps = 16/460 (3%)

Query: 72  SPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVEN 131
           +P I ++N++   + +    D       +L S G  PD ++   L+       +GLC   
Sbjct: 210 TPNIVTYNVIINGMCREGRVDDARELLNRLPSYGFQPDTVSYTTLL-------KGLCASK 262

Query: 132 RIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKT 191
           R  +   LF  M+     P+ +T+  LI  FCR G +  A+++ ++M     E+G  + T
Sbjct: 263 RWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLEQMT----EHGCATNT 318

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
            + +  I+I+S+CK+G VD A +L  +M   G NP  +  TT++ G C A  W++   L 
Sbjct: 319 TLCN--IVINSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKGLCRAERWDDAKELL 376

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
            EM+     PN +TFN  I  LC+ G I +A  L+E M + G      TYN+L++G+C+ 
Sbjct: 377 NEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMSEHGCTVGVVTYNALVNGFCVQ 436

Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
           G ID+A E+F SM    CK   ++Y  L+ G C    ++ A  L  +++       V+T+
Sbjct: 437 GHIDSALELFRSMP---CKPNTITYTTLLTGLCNAERLDGAAELVAEMLRGDCPPNVVTF 493

Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
           N L+S   Q G    A +L ++M  +   P+L TYN L+DG+ K+   ++A++L H L  
Sbjct: 494 NVLVSFFCQKGFLEEAIELVEQMMEHGCTPNLITYNTLLDGITKDCSSEDALELLHGLVS 553

Query: 432 NKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEK 491
                 +  F+ +I  L K  R++ A +LFH +   G+ P  V Y+ ++ GLC++ +++ 
Sbjct: 554 KGVSPDVITFSSIIGILSKEDRIEEAVQLFHVVQDIGMRPKAVVYNKILLGLCKRCEIDN 613

Query: 492 ANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELL 531
           A DF  YM  NGC PN  T+  L+ G        +  +LL
Sbjct: 614 AIDFFAYMVSNGCMPNESTYIILIEGLAHEGLLKEAQDLL 653



 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 106/370 (28%), Positives = 191/370 (51%), Gaps = 8/370 (2%)

Query: 167 NLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINP 226
           +L+ A+RL ++  S D E       +++  + +I +LC+ G    A  +    +G G   
Sbjct: 55  DLAGAVRLVERSGSCDGE-----APDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPV 109

Query: 227 AVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLL 286
            V    TL+ G+C  G+ +    L   M      P+  T+  +I  LC  G++ +A  LL
Sbjct: 110 DVFAYNTLVAGYCRYGHLDAARRLIGSM---PVAPDAYTYTPLIRVLCDRGRVADALSLL 166

Query: 287 ELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKI 346
           + M++RG  P+  TY  L++  C     + A  +   M +KGC   +V+YN++ING C+ 
Sbjct: 167 DDMLRRGCQPNVVTYTVLLEAMCRNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCRE 226

Query: 347 LNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTY 406
             V++A  L  ++ S G +   ++Y TLL GL  + +    ++LF EM   N  P+  T+
Sbjct: 227 GRVDDARELLNRLPSYGFQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTF 286

Query: 407 NILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQ 466
           ++LI   C+   V+ A+++   +  +       + N +I+ +CK GR+D+A++L + +  
Sbjct: 287 DMLIRFFCRGGMVERAIQVLEQMTEHGCATNTTLCNIVINSICKQGRVDDAFKLLNDMGS 346

Query: 467 KGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSK 526
            G  P  ++Y+ ++ GLCR  + + A + L  M +N C PN VTFNT +    Q     +
Sbjct: 347 YGCNPDTISYTTVLKGLCRAERWDDAKELLNEMVRNNCPPNEVTFNTFICILCQKGLIEQ 406

Query: 527 VVELLHKMAE 536
            + L+ +M+E
Sbjct: 407 AIMLIEQMSE 416



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 83/308 (26%), Positives = 138/308 (44%), Gaps = 16/308 (5%)

Query: 57  NEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNIL 116
           ++A+     M      P   +FN     + +    +  I    ++   G     +T N L
Sbjct: 370 DDAKELLNEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMSEHGCTVGVVTYNAL 429

Query: 117 INCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHK 176
           +N       G CV+  I  A  LF++M     +P+ ITY TL+ G C    L  A  L  
Sbjct: 430 VN-------GFCVQGHIDSALELFRSM---PCKPNTITYTTLLTGLCNAERLDGAAELVA 479

Query: 177 KMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIH 236
           +M+ GD         N+ ++++++   C++G +++A EL  +M   G  P ++   TL+ 
Sbjct: 480 EMLRGD------CPPNVVTFNVLVSFFCQKGFLEEAIELVEQMMEHGCTPNLITYNTLLD 533

Query: 237 GFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNP 296
           G     + E+   L   ++  G  P+++TF+ +I  L K  +I EA  L  ++   G+ P
Sbjct: 534 GITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGILSKEDRIEEAVQLFHVVQDIGMRP 593

Query: 297 DRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLY 356
               YN ++ G C    ID A + F  M S GC     +Y ILI G      ++EA  L 
Sbjct: 594 KAVVYNKILLGLCKRCEIDNAIDFFAYMVSNGCMPNESTYIILIEGLAHEGLLKEAQDLL 653

Query: 357 RQIISNGV 364
             + S GV
Sbjct: 654 SVLCSRGV 661


>gi|296085006|emb|CBI28421.3| unnamed protein product [Vitis vinifera]
          Length = 740

 Score =  259 bits (661), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 166/512 (32%), Positives = 252/512 (49%), Gaps = 50/512 (9%)

Query: 77  SFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEA 136
           S N L   +AK    +   + Y+++++ G+ P  LT N LIN    K        +++EA
Sbjct: 165 SCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKK-------GKVREA 217

Query: 137 TWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSY 196
             +   +  + + PDV TY +LI G CR  NL +A  +  +MV    +       N  +Y
Sbjct: 218 ELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCD------PNSVTY 271

Query: 197 SIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLD 256
           S +I+ LC EG VD+A ++  EM  +GI P V   T  I   C   + EE   L   M  
Sbjct: 272 STLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKK 331

Query: 257 LGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDT 316
            G RPN+ T+  +I  L + GK+  A GL   M++ GL P+  TYN+L++  C+ GR  T
Sbjct: 332 RGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFST 391

Query: 317 AREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLS 376
           A +IF  M   G      +YN +I G C   ++E+AM L+ +++  G   TV+TYNTL++
Sbjct: 392 ALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLIN 451

Query: 377 GLFQAGQAGYAQKLFDEMKLYNVEPDLSTYN----------------------------- 407
           G    G    A +L D MK    EPD  TYN                             
Sbjct: 452 GYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNP 511

Query: 408 ------ILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELF 461
                  LIDG  K+  V  A+ L   +E       +E +N +I+GL K  R   A ++ 
Sbjct: 512 NPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKIC 571

Query: 462 HKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQN 521
            K+ ++GL+P V+TY+ +I GLCR G+ + A      MEK  C PN+ T+++L++G  Q 
Sbjct: 572 DKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQE 631

Query: 522 NKTSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
            K  +   LL +M    + L PD+ TF+ ++D
Sbjct: 632 GKADEAEILLKEME--RKGLAPDEVTFTSLID 661



 Score =  238 bits (608), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 155/498 (31%), Positives = 245/498 (49%), Gaps = 48/498 (9%)

Query: 56  LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNI 115
           + EA      +     SP + ++  L     +NR+ D     + ++V  G  P+ +T + 
Sbjct: 214 VREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYST 273

Query: 116 LINCFGNKERGLCVENRIKEATWLFKNMIAFGV--------------------------- 148
           LIN       GLC E R+ EA  + + MI  G+                           
Sbjct: 274 LIN-------GLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELV 326

Query: 149 --------RPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIII 200
                   RP+V TY  LI+G  R G L VA+ L+ KM+    + GL+   N  +Y+ +I
Sbjct: 327 ARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKML----KEGLVP--NTVTYNALI 380

Query: 201 DSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPR 260
           + LC  G    A ++F  M+G G          +I G C  G+ E+   LF +ML +GP 
Sbjct: 381 NELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPL 440

Query: 261 PNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREI 320
           P ++T+N +I+     G +N A  LL+LM + G  PD +TYN L+ G+   G++++A   
Sbjct: 441 PTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFY 500

Query: 321 FLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQ 380
           F  M   G     VSY  LI+G+ K   V+ A+SL +++   G    V +YN +++GL +
Sbjct: 501 FQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSK 560

Query: 381 AGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEI 440
             +   A+K+ D+M    + P++ TY  LIDGLC+N   Q A K+FH +E  K    +  
Sbjct: 561 ENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYT 620

Query: 441 FNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYME 500
           ++ LI GLC+ G+ D A  L  ++ +KGL P  VT++ +I G    G+++ A   L  M 
Sbjct: 621 YSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMV 680

Query: 501 KNGCAPNVVTFNTLMHGF 518
             GC PN  T++ L+ G 
Sbjct: 681 DMGCKPNYRTYSVLLKGL 698



 Score =  188 bits (477), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 123/398 (30%), Positives = 195/398 (48%), Gaps = 37/398 (9%)

Query: 198 IIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDL 257
           ++I +   E  + +  +   E+ G G   ++  C TL+         E    L+ +ML+ 
Sbjct: 133 LMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNS 192

Query: 258 GPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTA 317
           G +P+LLTFN +I+ L K GK+ EA  +L  + Q  L+PD FTY SL+ G+C    +D A
Sbjct: 193 GIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLA 252

Query: 318 REIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYN----- 372
             +F  M  +GC    V+Y+ LING C    V+EA+ +  ++I  G+  TV TY      
Sbjct: 253 FGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITA 312

Query: 373 ------------------------------TLLSGLFQAGQAGYAQKLFDEMKLYNVEPD 402
                                          L+SGL + G+   A  L+ +M    + P+
Sbjct: 313 LCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPN 372

Query: 403 LSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFH 462
             TYN LI+ LC       A+K+FH +E +      + +N +I GLC  G ++ A  LF 
Sbjct: 373 TVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFE 432

Query: 463 KLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNN 522
           K+ + G +PTVVTY+ +I+G   KG +  A   L  M++NGC P+  T+N L+ GF +  
Sbjct: 433 KMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWG 492

Query: 523 KTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEK 560
           K         +M E   N  P+  +++ ++D  +KD K
Sbjct: 493 KLESASFYFQEMVECGLN--PNPVSYTALIDGHSKDGK 528



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 112/386 (29%), Positives = 190/386 (49%), Gaps = 35/386 (9%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILIN--CFGNK------- 123
           P + ++  L   +++    +  I  Y K++  GL+P+ +T N LIN  C G +       
Sbjct: 336 PNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKI 395

Query: 124 -------------------ERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCR 164
                               +GLC+   I++A  LF+ M+  G  P V+TY TLING+  
Sbjct: 396 FHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLT 455

Query: 165 TGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGI 224
            GN++ A RL   M     ENG   + + ++Y+ ++    K G ++ A   F EM   G+
Sbjct: 456 KGNVNNAARLLDLM----KENG--CEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGL 509

Query: 225 NPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANG 284
           NP  V  T LI G    G  +    L   M ++G  PN+ ++N +I+ L K  + +EA  
Sbjct: 510 NPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEK 569

Query: 285 LLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYC 344
           + + M+++GL P+  TY +L+DG C  GR   A +IF  M  + C   + +Y+ LI G C
Sbjct: 570 ICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLC 629

Query: 345 KILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLS 404
           +    +EA  L +++   G+    +T+ +L+ G    G+  +A  L   M     +P+  
Sbjct: 630 QEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDMGCKPNYR 689

Query: 405 TYNILIDGLCKNNCVQEAVKLFHMLE 430
           TY++L+ GL K  C+    K+F +++
Sbjct: 690 TYSVLLKGLQK-ECLLLEEKIFPLVD 714


>gi|225439731|ref|XP_002272943.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic [Vitis vinifera]
          Length = 772

 Score =  259 bits (661), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 154/504 (30%), Positives = 256/504 (50%), Gaps = 38/504 (7%)

Query: 77  SFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEA 136
           ++N L   +        V     ++VS G+ PD  T NILI       + LC  ++I+ A
Sbjct: 178 TYNFLLNVLVDGNKLKLVEIVNSRMVSRGIKPDVTTFNILI-------KALCRAHQIRPA 230

Query: 137 TWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVS---------------G 181
             + + M ++G+ PD  T+ TL+ GF   GN++ ALR+ ++MV+               G
Sbjct: 231 ILMMEEMGSYGLSPDEKTFTTLMQGFIEEGNMNGALRIREQMVAAGCPSSNVTVNVLVHG 290

Query: 182 DYENGLIS--------------KTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPA 227
             + G I               + + F+++ +++ LC+ G V  A E+   M   G +P 
Sbjct: 291 YCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILDVMLQEGFDPD 350

Query: 228 VVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLE 287
           +    +LI G C  G  EE   +  +M+     PN +T+N +I  LCK  ++ EA  L  
Sbjct: 351 IFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQVEEATELAR 410

Query: 288 LMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKIL 347
           ++  +G+ PD  T+NSL+ G CL      A E+F  M +KGC     +YN+LI+  C   
Sbjct: 411 VLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLIDSLCSRG 470

Query: 348 NVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYN 407
            +EEA+SL +++ S+G  + V+TYNTL+ G  +  +   A+++FDEM+L  +  ++ TYN
Sbjct: 471 RLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNVVTYN 530

Query: 408 ILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQK 467
            LIDGLCKN  V+EA +L   + M   +     +N L+   C+AG +  A ++   +   
Sbjct: 531 TLIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNSLLTYFCRAGDIKKAADIVQTMTSN 590

Query: 468 GLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKV 527
           G  P  VTY  +I GL + G++E A+  L  ++  G      T+N ++    +  +TS+ 
Sbjct: 591 GCEPDSVTYGTLILGLSKAGRVELASRLLRTVQLKGMVLAPQTYNPVIKALFREKRTSEA 650

Query: 528 VELLHKMAEPERNLVPDDTTFSIV 551
           V L  +M   E+   PD  T+ +V
Sbjct: 651 VRLFREMM--EKGDPPDAVTYKVV 672



 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 153/482 (31%), Positives = 246/482 (51%), Gaps = 16/482 (3%)

Query: 77  SFNLLFGAVAKNRHYDAVISFYRKLVS-IGLLPDFLTLNILINCFGNKERGLCVENRIKE 135
           +F +L  + AK   +D  ++    +    GL  D  T N L+N        L   N++K 
Sbjct: 142 TFLILIESYAKFELFDEAVAVVDIMEEEFGLKLDAFTYNFLLNV-------LVDGNKLKL 194

Query: 136 ATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFS 195
              +   M++ G++PDV T+  LI   CR   +  A+ + ++M  G Y      KT    
Sbjct: 195 VEIVNSRMVSRGIKPDVTTFNILIKALCRAHQIRPAILMMEEM--GSYGLSPDEKT---- 248

Query: 196 YSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEML 255
           ++ ++    +EG ++ A  +  +M   G   + V    L+HG+C  G  EEV     EM 
Sbjct: 249 FTTLMQGFIEEGNMNGALRIREQMVAAGCPSSNVTVNVLVHGYCKEGRIEEVLSFIDEMS 308

Query: 256 DLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRID 315
           + G RP+  TFN +++ LC+ G +  A  +L++M+Q G +PD FTYNSL+ G C +G ++
Sbjct: 309 NEGFRPDRFTFNSLVNGLCRIGHVKHALEILDVMLQEGFDPDIFTYNSLIFGLCKLGEVE 368

Query: 316 TAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLL 375
            A EI   M  +      V+YN LI+  CK   VEEA  L R + S G+   V T+N+L+
Sbjct: 369 EAVEILNQMILRDFSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLI 428

Query: 376 SGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFE 435
            GL        A +LF+EMK     PD  TYN+LID LC    ++EA+ L   +E +   
Sbjct: 429 QGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLIDSLCSRGRLEEALSLLKEMESSGCS 488

Query: 436 FGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDF 495
             +  +N LIDG CK  R++ A E+F ++  +G+   VVTY+ +I GLC+  ++E+A   
Sbjct: 489 RNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNVVTYNTLIDGLCKNRRVEEAAQL 548

Query: 496 LLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLL 555
           +  M   G  P+  T+N+L+  F +     K  +++  M        PD  T+  ++  L
Sbjct: 549 MDQMLMEGLKPDKFTYNSLLTYFCRAGDIKKAADIVQTMT--SNGCEPDSVTYGTLILGL 606

Query: 556 AK 557
           +K
Sbjct: 607 SK 608



 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 155/510 (30%), Positives = 246/510 (48%), Gaps = 37/510 (7%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCF---GN------- 122
           P +++FN+L  A+ +       I    ++ S GL PD  T   L+  F   GN       
Sbjct: 209 PDVTTFNILIKALCRAHQIRPAILMMEEMGSYGLSPDEKTFTTLMQGFIEEGNMNGALRI 268

Query: 123 KER------------------GLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCR 164
           +E+                  G C E RI+E       M   G RPD  T+ +L+NG CR
Sbjct: 269 REQMVAAGCPSSNVTVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCR 328

Query: 165 TGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGI 224
            G++  AL +   M+   ++       +IF+Y+ +I  LCK G V++A E+  +M  R  
Sbjct: 329 IGHVKHALEILDVMLQEGFD------PDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDF 382

Query: 225 NPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANG 284
           +P  V   TLI   C     EE   L   +   G  P++ TFN +I  LC       A  
Sbjct: 383 SPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAME 442

Query: 285 LLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYC 344
           L E M  +G +PD FTYN L+D  C  GR++ A  +   M S GC   VV+YN LI+G+C
Sbjct: 443 LFEEMKTKGCHPDEFTYNMLIDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFC 502

Query: 345 KILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLS 404
           K   +EEA  ++ ++   G+ + V+TYNTL+ GL +  +   A +L D+M +  ++PD  
Sbjct: 503 KNKRIEEAEEIFDEMELQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEGLKPDKF 562

Query: 405 TYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKL 464
           TYN L+   C+   +++A  +   +  N  E     +  LI GL KAGR++ A  L   +
Sbjct: 563 TYNSLLTYFCRAGDIKKAADIVQTMTSNGCEPDSVTYGTLILGLSKAGRVELASRLLRTV 622

Query: 465 PQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQ-NNK 523
             KG+V    TY+ +I  L R+ +  +A      M + G  P+ VT+  +  G       
Sbjct: 623 QLKGMVLAPQTYNPVIKALFREKRTSEAVRLFREMMEKGDPPDAVTYKVVFRGLCSGGGP 682

Query: 524 TSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
             + V+ L +M   ++  +PD ++F ++ +
Sbjct: 683 IGEAVDFLVEMT--DKGFLPDFSSFLMLAE 710



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 148/482 (30%), Positives = 221/482 (45%), Gaps = 55/482 (11%)

Query: 39  TQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFY 98
           T +  F+ E   +G + + E     G      PS  ++  N+L     K    + V+SF 
Sbjct: 251 TLMQGFIEEGNMNGALRIREQMVAAGC-----PSSNVT-VNVLVHGYCKEGRIEEVLSFI 304

Query: 99  RKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTL 158
            ++ + G  PD  T N L+N       GLC    +K A  +   M+  G  PD+ TY +L
Sbjct: 305 DEMSNEGFRPDRFTFNSLVN-------GLCRIGHVKHALEILDVMLQEGFDPDIFTYNSL 357

Query: 159 INGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLE 218
           I G C+ G +  A+ +  +M+  D+        N  +Y+ +I +LCKE  V++A EL   
Sbjct: 358 IFGLCKLGEVEEAVEILNQMILRDF------SPNTVTYNTLISTLCKENQVEEATELARV 411

Query: 219 MKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGK 278
           +  +GI P V    +LI G C   N      LF EM   G  P+  T+N++ID LC  G+
Sbjct: 412 LTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLIDSLCSRGR 471

Query: 279 INEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNI 338
           + EA  LL+ M   G + +  TYN+L+DG+C   RI+ A EIF  M  +G    VV+YN 
Sbjct: 472 LEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNVVTYNT 531

Query: 339 LINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYN 398
           LI+G CK   VEEA  L  Q++  G++    TYN+LL+   +AG    A  +   M    
Sbjct: 532 LIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNSLLTYFCRAGDIKKAADIVQTMTSNG 591

Query: 399 VEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAW 458
            EPD  TY  LI GL K   V+ A +L   +++       + +N +I  L +  R   A 
Sbjct: 592 CEPDSVTYGTLILGLSKAGRVELASRLLRTVQLKGMVLAPQTYNPVIKALFREKRTSEAV 651

Query: 459 ELFHKLPQKGLVPTVVTYSI------------------------------------MIHG 482
            LF ++ +KG  P  VTY +                                    +  G
Sbjct: 652 RLFREMMEKGDPPDAVTYKVVFRGLCSGGGPIGEAVDFLVEMTDKGFLPDFSSFLMLAEG 711

Query: 483 LC 484
           LC
Sbjct: 712 LC 713



 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 139/464 (29%), Positives = 204/464 (43%), Gaps = 78/464 (16%)

Query: 30  QIAAVSSPETQL--NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAK 87
           Q+ A   P + +  N  +H  CK G I   E   F   M++    P   +FN L   + +
Sbjct: 271 QMVAAGCPSSNVTVNVLVHGYCKEGRIE--EVLSFIDEMSNEGFRPDRFTFNSLVNGLCR 328

Query: 88  NRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERG--------------------- 126
             H    +     ++  G  PD  T N LI  FG  + G                     
Sbjct: 329 IGHVKHALEILDVMLQEGFDPDIFTYNSLI--FGLCKLGEVEEAVEILNQMILRDFSPNT 386

Query: 127 ---------LCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKK 177
                    LC EN+++EAT L + + + G+ PDV T+ +LI G C T N  +A+ L ++
Sbjct: 387 VTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEE 446

Query: 178 MVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHG 237
           M +           + F+Y+++IDSLC  G +++A  L  EM+  G +  VV   TLI G
Sbjct: 447 MKTKG------CHPDEFTYNMLIDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDG 500

Query: 238 FCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPD 297
           FC     EE   +F EM   G   N++T+N +ID LCK  ++ EA  L++ M+  GL PD
Sbjct: 501 FCKNKRIEEAEEIFDEMELQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEGLKPD 560

Query: 298 RFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYR 357
           +FTYNSL+  +C  G I  A +I  +M S GC+   V+Y  LI G  K   VE A  L R
Sbjct: 561 KFTYNSLLTYFCRAGDIKKAADIVQTMTSNGCEPDSVTYGTLILGLSKAGRVELASRLLR 620

Query: 358 QIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNI--------- 408
            +   G+     TYN ++  LF+  +   A +LF EM      PD  TY +         
Sbjct: 621 TVQLKGMVLAPQTYNPVIKALFREKRTSEAVRLFREMMEKGDPPDAVTYKVVFRGLCSGG 680

Query: 409 ---------------------------LIDGLCKNNCVQEAVKL 425
                                      L +GLC  +     +KL
Sbjct: 681 GPIGEAVDFLVEMTDKGFLPDFSSFLMLAEGLCALSMEDTLIKL 724



 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 68/315 (21%), Positives = 136/315 (43%), Gaps = 38/315 (12%)

Query: 291 QRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVE 350
           Q    P    Y  ++      G   + R +   M   GC+    ++ ILI  Y K    +
Sbjct: 98  QPNFVPSSVIYEEVLRKLGKDGSFGSMRRVLQEMKHTGCEIRRGTFLILIESYAKFELFD 157

Query: 351 EAMSLY------------------------------------RQIISNGVRQTVITYNTL 374
           EA+++                                      +++S G++  V T+N L
Sbjct: 158 EAVAVVDIMEEEFGLKLDAFTYNFLLNVLVDGNKLKLVEIVNSRMVSRGIKPDVTTFNIL 217

Query: 375 LSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKF 434
           +  L +A Q   A  + +EM  Y + PD  T+  L+ G  +   +  A+++   +     
Sbjct: 218 IKALCRAHQIRPAILMMEEMGSYGLSPDEKTFTTLMQGFIEEGNMNGALRIREQMVAAGC 277

Query: 435 EFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKAND 494
                  N L+ G CK GR++       ++  +G  P   T++ +++GLCR G ++ A +
Sbjct: 278 PSSNVTVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHALE 337

Query: 495 FLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDL 554
            L  M + G  P++ T+N+L+ G  +  +  + VE+L++M    R+  P+  T++ ++  
Sbjct: 338 ILDVMLQEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMI--LRDFSPNTVTYNTLIST 395

Query: 555 LAKDEKYHECSAVSK 569
           L K+ +  E + +++
Sbjct: 396 LCKENQVEEATELAR 410



 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 87/327 (26%), Positives = 143/327 (43%), Gaps = 20/327 (6%)

Query: 38  ETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISF 97
           E   N  +   C  G   L EA      M     S  + ++N L     KN+  +     
Sbjct: 456 EFTYNMLIDSLCSRG--RLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEI 513

Query: 98  YRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGT 157
           + ++   G+  + +T N LI+       GLC   R++EA  L   M+  G++PD  TY +
Sbjct: 514 FDEMELQGISRNVVTYNTLID-------GLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNS 566

Query: 158 LINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFL 217
           L+  FCR G++  A  + + M S   E   ++      Y  +I  L K G V+ A  L  
Sbjct: 567 LLTYFCRAGDIKKAADIVQTMTSNGCEPDSVT------YGTLILGLSKAGRVELASRLLR 620

Query: 218 EMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGG 277
            ++ +G+  A      +I          E   LF EM++ G  P+ +T+ V+   LC GG
Sbjct: 621 TVQLKGMVLAPQTYNPVIKALFREKRTSEAVRLFREMMEKGDPPDAVTYKVVFRGLCSGG 680

Query: 278 -KINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDT-AREIFLSMHSKGCKHTVVS 335
             I EA   L  M  +G  PD  ++  L +G C +   DT  + +   M       + VS
Sbjct: 681 GPIGEAVDFLVEMTDKGFLPDFSSFLMLAEGLCALSMEDTLIKLVNRVMKQANFSDSEVS 740

Query: 336 YNILINGYCKILNVEEAMSLYRQIISN 362
              +I G+ KI   ++A++   +I+S+
Sbjct: 741 ---MIMGFLKIRKFQDALATLGRILSS 764


>gi|224089372|ref|XP_002308709.1| predicted protein [Populus trichocarpa]
 gi|222854685|gb|EEE92232.1| predicted protein [Populus trichocarpa]
          Length = 1115

 Score =  259 bits (661), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 150/476 (31%), Positives = 263/476 (55%), Gaps = 15/476 (3%)

Query: 77  SFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEA 136
           S+N L   + ++      +  YR++VS GL P   T + L+   G +         IK  
Sbjct: 196 SYNGLIHFLLQSGFCKEALEVYRRMVSEGLKPSLKTFSALMVASGKRRN-------IKTV 248

Query: 137 TWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSY 196
             L + M + G+RP++ TY   I    R G +  A R+ K+M     ++G     ++ +Y
Sbjct: 249 MGLLEEMESMGLRPNIYTYTICIRVLGRDGKIDEAYRIMKRMD----DDG--CGPDVVTY 302

Query: 197 SIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLD 256
           +++ID+LC    +D A  LF +MK     P  V   TL+  F   G+ ++V  ++ EM  
Sbjct: 303 TVLIDALCTARKLDDAMCLFTKMKSSSHKPDKVTYVTLLDKFSDCGHLDKVEKIWTEMEA 362

Query: 257 LGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDT 316
            G  P+++TF ++++ LCK G+INEA  LL+ M ++G+ P+  TYN+L+ G     R+D 
Sbjct: 363 DGYAPDVVTFTILVNALCKAGRINEAFDLLDTMRKQGVLPNLHTYNTLISGLLRANRLDD 422

Query: 317 AREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLS 376
           A ++F +M S G + T  +Y +LI+ + K  +  +A+  + ++ + G+   ++  N  L 
Sbjct: 423 ALDLFSNMESLGVEPTAYTYILLIDYHGKSGHPGKALETFEKMKARGIAPNIVACNASLY 482

Query: 377 GLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEF 436
            L + G+ G A+ +F+E+K   + PD  TYN+++    K   V EA+KL   +   + E 
Sbjct: 483 SLAEMGRLGEAKAMFNELKSSGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEP 542

Query: 437 GIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFL 496
            + + N LID L KAGR++ AW++F ++ +  L PTVVTY+I++ GL ++G+++KA    
Sbjct: 543 DVIVINSLIDTLYKAGRVEEAWQMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQKAVQLF 602

Query: 497 LYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVV 552
             M  +GC+PN +TFNTL+    +N++    +++ +KM     N  PD  TF+ ++
Sbjct: 603 ESMNGHGCSPNTITFNTLLDCLCKNDEVDLALKMFYKMT--TMNCRPDVLTFNTII 656



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 136/462 (29%), Positives = 227/462 (49%), Gaps = 14/462 (3%)

Query: 55   NLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLN 114
             + +A   F  M     SP   +FN L   + KN   D  +  + K+ ++   PD LT N
Sbjct: 594  QIQKAVQLFESMNGHGCSPNTITFNTLLDCLCKNDEVDLALKMFYKMTTMNCRPDVLTFN 653

Query: 115  ILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRL 174
             +I+       G   +N+IK A WLF  M    +RPD +T  TL+ G  ++G +  A R 
Sbjct: 654  TIIH-------GFIKQNQIKNAIWLFHQMKKL-LRPDHVTLCTLLPGVIKSGQIEDAFR- 704

Query: 175  HKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTL 234
                ++ D+   + S  +   +  ++  +  E   +KA      +  R I     V   +
Sbjct: 705  ----ITEDFFYQVGSNIDRSFWEDVMGGILTEAGTEKAILFGERLVCRAICKDDSVLIPI 760

Query: 235  IHGFCCAGNWEEVNGLFIEML-DLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRG 293
            I   C          +F++   +LG +P L  +N++ID   +   +  A  L E M   G
Sbjct: 761  IKVLCKHKKTSVARNVFVKFTKELGVKPTLKVYNLLIDGFLEVHNVEVAWNLFEEMKSAG 820

Query: 294  LNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAM 353
              PD FTYNSL+D +   G+I+   +++  M ++GCK   ++YN++I+   K   +++AM
Sbjct: 821  CAPDTFTYNSLIDAHGKSGKINELFDLYDEMLTRGCKPNTITYNMVISNLVKSNRLDKAM 880

Query: 354  SLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGL 413
             LY  ++S     T  T+  L+ GL ++G+   A ++FD M  Y   P+ + YNIL++G 
Sbjct: 881  DLYYNLVSGDFSPTPCTFGPLIDGLLKSGRLDDAHEMFDGMVHYGCRPNSAIYNILVNGY 940

Query: 414  CKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTV 473
             K   V  A + F  +        ++ +  L+D LC AGR+D+A   F KL Q GL P +
Sbjct: 941  GKLGHVDTACEFFKRMVKEGIRPDLKSYTILVDILCIAGRVDDALHYFEKLKQAGLDPDL 1000

Query: 474  VTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLM 515
            V Y++MI+GL R  + E+A      M+  G  P++ T+N+L+
Sbjct: 1001 VAYNLMINGLGRSQRTEEALSLFHEMQNRGIVPDLYTYNSLI 1042



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 123/438 (28%), Positives = 217/438 (49%), Gaps = 8/438 (1%)

Query: 127 LCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENG 186
           L V  R+++  ++F  M    +R +V TY  +       G L  A    +KM     E G
Sbjct: 134 LRVHRRVEDMAFVFDLMQRQIIRRNVDTYLIIFKSLFIRGGLRQAPSALEKM----REAG 189

Query: 187 LISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEE 246
            +   N +SY+ +I  L + G   +A E++  M   G+ P++   + L+       N + 
Sbjct: 190 FV--LNAYSYNGLIHFLLQSGFCKEALEVYRRMVSEGLKPSLKTFSALMVASGKRRNIKT 247

Query: 247 VNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMD 306
           V GL  EM  +G RPN+ T+ + I  L + GKI+EA  +++ M   G  PD  TY  L+D
Sbjct: 248 VMGLLEEMESMGLRPNIYTYTICIRVLGRDGKIDEAYRIMKRMDDDGCGPDVVTYTVLID 307

Query: 307 GYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQ 366
             C   ++D A  +F  M S   K   V+Y  L++ +    ++++   ++ ++ ++G   
Sbjct: 308 ALCTARKLDDAMCLFTKMKSSSHKPDKVTYVTLLDKFSDCGHLDKVEKIWTEMEADGYAP 367

Query: 367 TVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLF 426
            V+T+  L++ L +AG+   A  L D M+   V P+L TYN LI GL + N + +A+ LF
Sbjct: 368 DVVTFTILVNALCKAGRINEAFDLLDTMRKQGVLPNLHTYNTLISGLLRANRLDDALDLF 427

Query: 427 HMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRK 486
             +E    E     +  LID   K+G    A E F K+  +G+ P +V  +  ++ L   
Sbjct: 428 SNMESLGVEPTAYTYILLIDYHGKSGHPGKALETFEKMKARGIAPNIVACNASLYSLAEM 487

Query: 487 GKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDT 546
           G+L +A      ++ +G AP+ VT+N +M  + +  +  + ++LL +M++ +    PD  
Sbjct: 488 GRLGEAKAMFNELKSSGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQ--CEPDVI 545

Query: 547 TFSIVVDLLAKDEKYHEC 564
             + ++D L K  +  E 
Sbjct: 546 VINSLIDTLYKAGRVEEA 563



 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 136/506 (26%), Positives = 229/506 (45%), Gaps = 26/506 (5%)

Query: 56  LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNI 115
           L EA+  F  +     +P   ++N++    +K    D  I    ++  +   PD + +N 
Sbjct: 490 LGEAKAMFNELKSSGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIVINS 549

Query: 116 LINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLH 175
           LI+        L    R++EA  +F  M    + P V+TY  L+ G  + G +  A++L 
Sbjct: 550 LIDT-------LYKAGRVEEAWQMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQKAVQLF 602

Query: 176 KKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLI 235
           + M      NG     N  +++ ++D LCK   VD A ++F +M      P V+   T+I
Sbjct: 603 ESM------NGHGCSPNTITFNTLLDCLCKNDEVDLALKMFYKMTTMNCRPDVLTFNTII 656

Query: 236 HGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLE-LMIQRGL 294
           HGF      +    LF +M  L  RP+ +T   ++  + K G+I +A  + E    Q G 
Sbjct: 657 HGFIKQNQIKNAIWLFHQMKKL-LRPDHVTLCTLLPGVIKSGQIEDAFRITEDFFYQVGS 715

Query: 295 NPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMS 354
           N DR  +  +M G  ++    T + I        C+      ++LI    K+L   +  S
Sbjct: 716 NIDRSFWEDVMGG--ILTEAGTEKAILFG-ERLVCRAICKDDSVLIP-IIKVLCKHKKTS 771

Query: 355 LYRQIISN-----GVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNIL 409
           + R +        GV+ T+  YN L+ G  +      A  LF+EMK     PD  TYN L
Sbjct: 772 VARNVFVKFTKELGVKPTLKVYNLLIDGFLEVHNVEVAWNLFEEMKSAGCAPDTFTYNSL 831

Query: 410 IDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGL 469
           ID   K+  + E   L+  +     +     +N +I  L K+ RLD A +L++ L     
Sbjct: 832 IDAHGKSGKINELFDLYDEMLTRGCKPNTITYNMVISNLVKSNRLDKAMDLYYNLVSGDF 891

Query: 470 VPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVE 529
            PT  T+  +I GL + G+L+ A++    M   GC PN   +N L++G+ +        E
Sbjct: 892 SPTPCTFGPLIDGLLKSGRLDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKLGHVDTACE 951

Query: 530 LLHKMAEPERNLVPDDTTFSIVVDLL 555
              +M   +  + PD  +++I+VD+L
Sbjct: 952 FFKRMV--KEGIRPDLKSYTILVDIL 975



 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 142/554 (25%), Positives = 253/554 (45%), Gaps = 80/554 (14%)

Query: 72  SPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVEN 131
           +P + +F +L  A+ K    +        +   G+LP+  T N LI+       GL   N
Sbjct: 366 APDVVTFTILVNALCKAGRINEAFDLLDTMRKQGVLPNLHTYNTLIS-------GLLRAN 418

Query: 132 RIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKM-VSGDYENGLISK 190
           R+ +A  LF NM + GV P   TY  LI+   ++G+   AL   +KM   G   N +   
Sbjct: 419 RLDDALDLFSNMESLGVEPTAYTYILLIDYHGKSGHPGKALETFEKMKARGIAPNIVACN 478

Query: 191 TNIFS----------------------------YSIIIDSLCKEGLVDKAKELFLEMKGR 222
            +++S                            Y++++    K G VD+A +L  EM   
Sbjct: 479 ASLYSLAEMGRLGEAKAMFNELKSSGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKV 538

Query: 223 GINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEA 282
              P V+V  +LI     AG  EE   +F  M ++   P ++T+N+++  L K G+I +A
Sbjct: 539 QCEPDVIVINSLIDTLYKAGRVEEAWQMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQKA 598

Query: 283 NGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILING 342
             L E M   G +P+  T+N+L+D  C    +D A ++F  M +  C+  V+++N +I+G
Sbjct: 599 VQLFESMNGHGCSPNTITFNTLLDCLCKNDEVDLALKMFYKMTTMNCRPDVLTFNTIIHG 658

Query: 343 YCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEP- 401
           + K   ++ A+ L+ Q+    +R   +T  TLL G+ ++GQ   A ++ ++   Y V   
Sbjct: 659 FIKQNQIKNAIWLFHQM-KKLLRPDHVTLCTLLPGVIKSGQIEDAFRITEDF-FYQVGSN 716

Query: 402 -DLSTYNILIDGL-----------------CKNNCVQEAVKLFHMLEM-----------N 432
            D S +  ++ G+                 C+  C  ++V L  ++++           N
Sbjct: 717 IDRSFWEDVMGGILTEAGTEKAILFGERLVCRAICKDDSV-LIPIIKVLCKHKKTSVARN 775

Query: 433 KF-----EFGIE----IFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGL 483
            F     E G++    ++N LIDG  +   ++ AW LF ++   G  P   TY+ +I   
Sbjct: 776 VFVKFTKELGVKPTLKVYNLLIDGFLEVHNVEVAWNLFEEMKSAGCAPDTFTYNSLIDAH 835

Query: 484 CRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVP 543
            + GK+ +  D    M   GC PN +T+N ++   +++N+  K ++L + +   +    P
Sbjct: 836 GKSGKINELFDLYDEMLTRGCKPNTITYNMVISNLVKSNRLDKAMDLYYNLVSGD--FSP 893

Query: 544 DDTTFSIVVDLLAK 557
              TF  ++D L K
Sbjct: 894 TPCTFGPLIDGLLK 907


>gi|297607630|ref|NP_001060305.2| Os07g0621100 [Oryza sativa Japonica Group]
 gi|255677977|dbj|BAF22219.2| Os07g0621100 [Oryza sativa Japonica Group]
          Length = 734

 Score =  259 bits (661), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 159/524 (30%), Positives = 264/524 (50%), Gaps = 57/524 (10%)

Query: 77  SFNLLFGAVAKNRHYDAVISFYRKLV---SIGLLPDFLTLNILINCFGNKERGLCVENRI 133
           S+N +  A+ +  H+D   +  R +         P+ ++  +L+       R LC +   
Sbjct: 79  SYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLM-------RALCADRLA 131

Query: 134 KEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNI 193
            +A  L ++M + GVR DV+TYGTLI G C    +  A+ L  +M     E+G+  + N+
Sbjct: 132 DQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMC----ESGI--EPNV 185

Query: 194 FSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIE 253
             YS ++   CK G  +   ++F+EM  +GI P VV+ T LI   C  G  ++ +G+   
Sbjct: 186 VVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDM 245

Query: 254 MLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSL--------- 304
           M+  G  PN++T+NV+I+C+CK G + EA G+L+ M ++G+ PD  TYN+L         
Sbjct: 246 MVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLE 305

Query: 305 MD----------------------------GYCLVGRIDTAREIFLSMHSKGCKHTVVSY 336
           MD                            G C +GR+  A ++   M   GC   +V+Y
Sbjct: 306 MDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTY 365

Query: 337 NILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKL 396
           N+LI G  ++  V +AM L  ++ S G+     TY+ L+ G  +  Q   A+ L   M+ 
Sbjct: 366 NLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRD 425

Query: 397 YNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDN 456
             +EP+L  Y  L+  +C+   ++ A  LF+ ++ N F   +  ++ +I G CKAG L  
Sbjct: 426 RGIEPELFHYIPLLVAMCEQGMMERARNLFNEMD-NNFPLDVVAYSTMIHGACKAGDLKT 484

Query: 457 AWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMH 516
           A EL   +  +GL P  VTYSI+I+   + G +E AN  L  M  +G  P+V  F++L+ 
Sbjct: 485 AKELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQ 544

Query: 517 GFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIV-VDLLAKDE 559
           G+    + +KV+EL+ +M    +N+  D    S +   L+A +E
Sbjct: 545 GYSTKGEINKVLELIREMI--TKNIALDSKIISTLSTSLVASNE 586



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 81/259 (31%), Positives = 139/259 (53%), Gaps = 3/259 (1%)

Query: 297 DRFTYNSLMDGYCLVGRIDTAREIFLSMH---SKGCKHTVVSYNILINGYCKILNVEEAM 353
           D  +YN+++   C  G  D A  +  +M       C+   VSY +L+   C     ++A+
Sbjct: 76  DAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRLADQAV 135

Query: 354 SLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGL 413
            L R + S GVR  V+TY TL+ GL  A +   A +L  EM    +EP++  Y+ L+ G 
Sbjct: 136 GLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGY 195

Query: 414 CKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTV 473
           CK+   ++  K+F  +     E  + ++  LID LCK G+   A  +   + ++GL P V
Sbjct: 196 CKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNV 255

Query: 474 VTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHK 533
           VTY+++I+ +C++G +++A   L  M + G AP+VVT+NTL+ G     +  + + LL +
Sbjct: 256 VTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEE 315

Query: 534 MAEPERNLVPDDTTFSIVV 552
           M   +  + P+  TF+ V+
Sbjct: 316 MVRGKNIVKPNVVTFNSVI 334


>gi|22296415|dbj|BAC10183.1| pentatricopeptide repeat protein-like [Oryza sativa Japonica Group]
          Length = 624

 Score =  259 bits (661), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 159/524 (30%), Positives = 264/524 (50%), Gaps = 57/524 (10%)

Query: 77  SFNLLFGAVAKNRHYDAVISFYRKLV---SIGLLPDFLTLNILINCFGNKERGLCVENRI 133
           S+N +  A+ +  H+D   +  R +         P+ ++  +L+       R LC +   
Sbjct: 79  SYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLM-------RALCADRLA 131

Query: 134 KEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNI 193
            +A  L ++M + GVR DV+TYGTLI G C    +  A+ L  +M     E+G+  + N+
Sbjct: 132 DQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMC----ESGI--EPNV 185

Query: 194 FSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIE 253
             YS ++   CK G  +   ++F+EM  +GI P VV+ T LI   C  G  ++ +G+   
Sbjct: 186 VVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDM 245

Query: 254 MLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSL--------- 304
           M+  G  PN++T+NV+I+C+CK G + EA G+L+ M ++G+ PD  TYN+L         
Sbjct: 246 MVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLE 305

Query: 305 MD----------------------------GYCLVGRIDTAREIFLSMHSKGCKHTVVSY 336
           MD                            G C +GR+  A ++   M   GC   +V+Y
Sbjct: 306 MDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTY 365

Query: 337 NILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKL 396
           N+LI G  ++  V +AM L  ++ S G+     TY+ L+ G  +  Q   A+ L   M+ 
Sbjct: 366 NLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRD 425

Query: 397 YNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDN 456
             +EP+L  Y  L+  +C+   ++ A  LF+ ++ N F   +  ++ +I G CKAG L  
Sbjct: 426 RGIEPELFHYIPLLVAMCEQGMMERARNLFNEMD-NNFPLDVVAYSTMIHGACKAGDLKT 484

Query: 457 AWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMH 516
           A EL   +  +GL P  VTYSI+I+   + G +E AN  L  M  +G  P+V  F++L+ 
Sbjct: 485 AKELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQ 544

Query: 517 GFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIV-VDLLAKDE 559
           G+    + +KV+EL+ +M    +N+  D    S +   L+A +E
Sbjct: 545 GYSTKGEINKVLELIREMI--TKNIALDSKIISTLSTSLVASNE 586



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 81/259 (31%), Positives = 139/259 (53%), Gaps = 3/259 (1%)

Query: 297 DRFTYNSLMDGYCLVGRIDTAREIFLSMH---SKGCKHTVVSYNILINGYCKILNVEEAM 353
           D  +YN+++   C  G  D A  +  +M       C+   VSY +L+   C     ++A+
Sbjct: 76  DAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRLADQAV 135

Query: 354 SLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGL 413
            L R + S GVR  V+TY TL+ GL  A +   A +L  EM    +EP++  Y+ L+ G 
Sbjct: 136 GLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGY 195

Query: 414 CKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTV 473
           CK+   ++  K+F  +     E  + ++  LID LCK G+   A  +   + ++GL P V
Sbjct: 196 CKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNV 255

Query: 474 VTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHK 533
           VTY+++I+ +C++G +++A   L  M + G AP+VVT+NTL+ G     +  + + LL +
Sbjct: 256 VTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEE 315

Query: 534 MAEPERNLVPDDTTFSIVV 552
           M   +  + P+  TF+ V+
Sbjct: 316 MVRGKNIVKPNVVTFNSVI 334


>gi|449448914|ref|XP_004142210.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Cucumis sativus]
 gi|449525343|ref|XP_004169677.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Cucumis sativus]
          Length = 768

 Score =  259 bits (661), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 160/464 (34%), Positives = 229/464 (49%), Gaps = 14/464 (3%)

Query: 77  SFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEA 136
           + N+L     K    D  +SF ++ VS G  PD  T N L+N       GLC     K A
Sbjct: 275 TVNVLINGFCKQGRIDQALSFIQEAVSEGFRPDQFTYNTLVN-------GLCKIGHAKHA 327

Query: 137 TWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSY 196
             +   M+  G+ PD+ TY +LI+G C+ G +  A+++  +MVS D         N  +Y
Sbjct: 328 MEVVDAMLLGGLDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRD------CSPNAVTY 381

Query: 197 SIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLD 256
           + II SLCKE  VD+A E+   +  +GI P V    +LI G C + N +    LF EM  
Sbjct: 382 NAIISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKG 441

Query: 257 LGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDT 316
            G RP+  T+N++ID LC   K+ EA  LL+ M   G   +   YN+L+DG+C   RI+ 
Sbjct: 442 KGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEE 501

Query: 317 AREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLS 376
           A EIF  M  +G     V+YN LI+G CK   VE+A  L  Q+I  G+R    TYN+LL+
Sbjct: 502 AEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEGLRPDKFTYNSLLT 561

Query: 377 GLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEF 436
              + G    A  +   M      PD+ TY  LI GLCK   VQ A +L   ++M     
Sbjct: 562 HFCKTGDIKKAADIVQTMTSSGCNPDIVTYATLISGLCKAGRVQVASRLLRSIQMKGMVL 621

Query: 437 GIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCR-KGKLEKANDF 495
               +N +I  L K  R   A  LF ++  K   P  +TY I+  GLC   G + +A DF
Sbjct: 622 TPHAYNPVIQALFKRNRTHEAMRLFREMLDKSEPPDAITYKIVYRGLCNGGGPIGEAVDF 681

Query: 496 LLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPER 539
            + M + G  P   +F  L  G    +    +V+L+  + E  +
Sbjct: 682 TVEMIERGNIPEFSSFVMLAEGLCTLSMDDTLVKLVDMIMEKAK 725



 Score =  256 bits (654), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 148/480 (30%), Positives = 248/480 (51%), Gaps = 21/480 (4%)

Query: 75  ISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCF---GNKERGLCVEN 131
           +S+FN+L  A+ K       I    ++ S GL PD  T   ++  +   GN +  L    
Sbjct: 203 VSTFNILIKALCKAHQVRPAILMMEEMPSYGLSPDETTFTTIMQGYIEGGNLDGAL---- 258

Query: 132 RIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKT 191
           RIKE       M+ +G     +T   LINGFC+ G +  AL   ++ VS  +      + 
Sbjct: 259 RIKE------QMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAVSEGF------RP 306

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
           + F+Y+ +++ LCK G    A E+   M   G++P +    +LI G C  G  EE   + 
Sbjct: 307 DQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPDIYTYNSLISGLCKLGEIEEAVKIL 366

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
            +M+     PN +T+N +I  LCK  +++EA  +  L+  +G+ PD  T+NSL+ G CL 
Sbjct: 367 DQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLS 426

Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
               +A ++F  M  KGC+    +YN+LI+  C    +EEA++L +++  NG  + V+ Y
Sbjct: 427 SNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELNGCARNVVIY 486

Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
           NTL+ G  +  +   A+++FDEM+L  V  D  TYN LIDGLCK+  V++A +L   + M
Sbjct: 487 NTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIM 546

Query: 432 NKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEK 491
                    +N L+   CK G +  A ++   +   G  P +VTY+ +I GLC+ G+++ 
Sbjct: 547 EGLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYATLISGLCKAGRVQV 606

Query: 492 ANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIV 551
           A+  L  ++  G       +N ++    + N+T + + L  +M   +++  PD  T+ IV
Sbjct: 607 ASRLLRSIQMKGMVLTPHAYNPVIQALFKRNRTHEAMRLFREML--DKSEPPDAITYKIV 664



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 136/460 (29%), Positives = 221/460 (48%), Gaps = 43/460 (9%)

Query: 146 FGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCK 205
           + ++PD   Y  L+N       L +    H  MV          + ++ +++I+I +LCK
Sbjct: 162 YRIKPDTRFYNVLLNVLVDANKLKLVESAHSSMVRRRI------RHDVSTFNILIKALCK 215

Query: 206 EGLVDKAKELFLEMKGRGINPAVVVCTT-------------------------------- 233
              V  A  +  EM   G++P     TT                                
Sbjct: 216 AHQVRPAILMMEEMPSYGLSPDETTFTTIMQGYIEGGNLDGALRIKEQMVEYGCPCTDVT 275

Query: 234 ---LIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMI 290
              LI+GFC  G  ++      E +  G RP+  T+N +++ LCK G    A  +++ M+
Sbjct: 276 VNVLINGFCKQGRIDQALSFIQEAVSEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAML 335

Query: 291 QRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVE 350
             GL+PD +TYNSL+ G C +G I+ A +I   M S+ C    V+YN +I+  CK   V+
Sbjct: 336 LGGLDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVD 395

Query: 351 EAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILI 410
           EA  + R + S G+   V T+N+L+ GL  +     A  LF+EMK     PD  TYN+LI
Sbjct: 396 EATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLI 455

Query: 411 DGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLV 470
           D LC +  ++EA+ L   +E+N     + I+N LIDG CK  R++ A E+F ++  +G+ 
Sbjct: 456 DSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVS 515

Query: 471 PTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVEL 530
              VTY+ +I GLC+  ++E A   +  M   G  P+  T+N+L+  F +     K  ++
Sbjct: 516 RDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAADI 575

Query: 531 LHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKS 570
           +  M     N  PD  T++ ++  L K  +    S + +S
Sbjct: 576 VQTMTSSGCN--PDIVTYATLISGLCKAGRVQVASRLLRS 613



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 136/456 (29%), Positives = 225/456 (49%), Gaps = 48/456 (10%)

Query: 150 PDVITYGTLINGFCRTGNLSVALRLHKKM-VSG-DYENGLISKTNIFSYSIIIDSLCKEG 207
           P    Y  ++    + G+     R+ ++M +SG +++ G+        + I ++S  K  
Sbjct: 95  PSSSVYEEILRKLGKAGSFEYMRRVLEEMKLSGCEFDRGI--------FLIFVESYGKFE 146

Query: 208 LVDKAKELFLEMKGR-GINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTF 266
           L D+   +   M+    I P       L++    A   + V      M+    R ++ TF
Sbjct: 147 LYDEVVGIVKVMEDEYRIKPDTRFYNVLLNVLVDANKLKLVESAHSSMVRRRIRHDVSTF 206

Query: 267 NVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHS 326
           N++I  LCK  ++  A  ++E M   GL+PD  T+ ++M GY   G +D A  I   M  
Sbjct: 207 NILIKALCKAHQVRPAILMMEEMPSYGLSPDETTFTTIMQGYIEGGNLDGALRIKEQMVE 266

Query: 327 KGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGY 386
            GC  T V+ N+LING+CK   +++A+S  ++ +S G R    TYNTL++GL + G A +
Sbjct: 267 YGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAVSEGFRPDQFTYNTLVNGLCKIGHAKH 326

Query: 387 AQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHML----------------- 429
           A ++ D M L  ++PD+ TYN LI GLCK   ++EAVK+   +                 
Sbjct: 327 AMEVVDAMLLGGLDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIIS 386

Query: 430 ---EMNKFEFGIEI---------------FNCLIDGLCKAGRLDNAWELFHKLPQKGLVP 471
              + N+ +   EI               FN LI GLC +    +A +LF ++  KG  P
Sbjct: 387 SLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRP 446

Query: 472 TVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELL 531
              TY+++I  LC   KLE+A + L  ME NGCA NVV +NTL+ GF +N +  +  E+ 
Sbjct: 447 DEFTYNMLIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIF 506

Query: 532 HKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAV 567
            +M    + +  D  T++ ++D L K ++  + + +
Sbjct: 507 DEME--LQGVSRDSVTYNTLIDGLCKSKRVEDAAQL 540



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 128/397 (32%), Positives = 187/397 (47%), Gaps = 17/397 (4%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
           N  +   CK G   + EA      M     SP   ++N +  ++ K    D      R L
Sbjct: 347 NSLISGLCKLG--EIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIARLL 404

Query: 102 VSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLING 161
            S G+LPD  T N LI       +GLC+ +  K A  LF+ M   G RPD  TY  LI+ 
Sbjct: 405 TSKGILPDVCTFNSLI-------QGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDS 457

Query: 162 FCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKG 221
            C +  L  AL L K+M      NG     N+  Y+ +ID  CK   +++A+E+F EM+ 
Sbjct: 458 LCSSRKLEEALNLLKEMEL----NG--CARNVVIYNTLIDGFCKNKRIEEAEEIFDEMEL 511

Query: 222 RGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINE 281
           +G++   V   TLI G C +   E+   L  +M+  G RP+  T+N ++   CK G I +
Sbjct: 512 QGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTGDIKK 571

Query: 282 ANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILIN 341
           A  +++ M   G NPD  TY +L+ G C  GR+  A  +  S+  KG   T  +YN +I 
Sbjct: 572 AADIVQTMTSSGCNPDIVTYATLISGLCKAGRVQVASRLLRSIQMKGMVLTPHAYNPVIQ 631

Query: 342 GYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQA-GYAQKLFDEMKLYNVE 400
              K     EAM L+R+++        ITY  +  GL   G   G A     EM      
Sbjct: 632 ALFKRNRTHEAMRLFREMLDKSEPPDAITYKIVYRGLCNGGGPIGEAVDFTVEMIERGNI 691

Query: 401 PDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFG 437
           P+ S++ +L +GLC  +     VKL  M+ M K +F 
Sbjct: 692 PEFSSFVMLAEGLCTLSMDDTLVKLVDMI-MEKAKFS 727


>gi|326505926|dbj|BAJ91202.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 669

 Score =  257 bits (657), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 151/487 (31%), Positives = 249/487 (51%), Gaps = 21/487 (4%)

Query: 77  SFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEA 136
           ++N L     +    DA     R + S+ + PD  T   +I       RGLC   R+ +A
Sbjct: 111 AYNTLVAGYCRYGRLDAA---RRLIASMPVPPDAYTYTPII-------RGLCDRGRVGDA 160

Query: 137 TWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSY 196
             L  +M+  G +P V+TY  L+   C++     A+ +  +M +           NI +Y
Sbjct: 161 LALLDDMLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKG------CTPNIVTY 214

Query: 197 SIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLD 256
           ++II+ +C+EG VD AKE+   +   G  P +V  TT++ G C A  W++V  LF EM+D
Sbjct: 215 NVIINGMCREGRVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVD 274

Query: 257 LGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDT 316
               PN +TF++++   C+GG +  A  +L+ M Q G  P+    N +++  C  GR+D 
Sbjct: 275 KKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDD 334

Query: 317 AREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLS 376
           A +   +M   GC    +SY  ++ G C+    E A  L  +++        +T+NT + 
Sbjct: 335 AYDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFIC 394

Query: 377 GLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEF 436
            L Q G    A KL + M  Y     + TYN L+ G C    V  A++LF+ L     E 
Sbjct: 395 ILCQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNLPC---EP 451

Query: 437 GIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFL 496
               +  L+ GLC A RLD A EL   + QK      VT+++++   C+KG +E+A + +
Sbjct: 452 NTITYTTLLTGLCHAERLDAAAELLAGMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELV 511

Query: 497 LYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLA 556
             M ++GC PN++TFNTL+ G  ++  + + +ELLH +     +L  D  T+S VVD+L+
Sbjct: 512 NQMMEHGCTPNLITFNTLLDGITKDCNSEEALELLHGLVSKGVSL--DTITYSSVVDVLS 569

Query: 557 KDEKYHE 563
           ++++  E
Sbjct: 570 REDRTEE 576



 Score =  232 bits (592), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 139/475 (29%), Positives = 235/475 (49%), Gaps = 18/475 (3%)

Query: 44  FLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVS 103
            L   CKS      EA      M     +P I ++N++   + +    D       +L S
Sbjct: 182 LLEAVCKSS--GFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAKEILNRLSS 239

Query: 104 IGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFC 163
            G  PD ++   ++       +GLC   R  +   LF  M+     P+ +T+  L+  FC
Sbjct: 240 YGFQPDIVSYTTVL-------KGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFC 292

Query: 164 RTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRG 223
           R G +  A+++ ++M     ++G    T + +  I+I+++CK+G VD A +    M   G
Sbjct: 293 RGGMVERAIQVLQQM----SQHGCTPNTTLCN--IVINAICKQGRVDDAYDFLNNMGMYG 346

Query: 224 INPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEAN 283
            NP  +  TT++ G C AG WE    L  EM+     PN +TFN  I  LC+ G I +A 
Sbjct: 347 CNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAI 406

Query: 284 GLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGY 343
            L+ELM + G +    TYN+L+ G+C+ GR+D+A E+F ++    C+   ++Y  L+ G 
Sbjct: 407 KLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNLP---CEPNTITYTTLLTGL 463

Query: 344 CKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDL 403
           C    ++ A  L   +I        +T+N L+S   Q G    A +L ++M  +   P+L
Sbjct: 464 CHAERLDAAAELLAGMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNL 523

Query: 404 STYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHK 463
            T+N L+DG+ K+   +EA++L H L           ++ ++D L +  R + A ++ H 
Sbjct: 524 ITFNTLLDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQMLHA 583

Query: 464 LPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGF 518
           +   G+ P V  Y+ ++  LC++ + ++A DF  YM  NGC PN  T+  L+ G 
Sbjct: 584 VQDMGMRPKVGMYNKILFALCKRCETDQAIDFFAYMVSNGCMPNESTYIILIEGL 638



 Score =  181 bits (460), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 96/345 (27%), Positives = 172/345 (49%), Gaps = 3/345 (0%)

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
           +++  + +I +LC+ G    A  +    +  G    V    TL+ G+C  G  +    L 
Sbjct: 73  DVYLCTKLIRNLCRRGRTSDAARVLRTAEASGAPVDVFAYNTLVAGYCRYGRLDAARRLI 132

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
             M      P+  T+  +I  LC  G++ +A  LL+ M+QRG  P   TY  L++  C  
Sbjct: 133 ASM---PVPPDAYTYTPIIRGLCDRGRVGDALALLDDMLQRGCQPSVVTYTVLLEAVCKS 189

Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
                A  +   M +KGC   +V+YN++ING C+   V++A  +  ++ S G +  +++Y
Sbjct: 190 SGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAKEILNRLSSYGFQPDIVSY 249

Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
            T+L GL  A +    + LF EM      P+  T+++L+   C+   V+ A+++   +  
Sbjct: 250 TTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQ 309

Query: 432 NKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEK 491
           +       + N +I+ +CK GR+D+A++  + +   G  P  ++Y+ ++ GLCR G+ E 
Sbjct: 310 HGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEH 369

Query: 492 ANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAE 536
           A + L  M +  C PN VTFNT +    Q     + ++L+  M E
Sbjct: 370 AKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPE 414



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 87/305 (28%), Positives = 154/305 (50%), Gaps = 5/305 (1%)

Query: 258 GPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTA 317
           G  P++     +I  LC+ G+ ++A  +L      G   D F YN+L+ GYC  GR+D A
Sbjct: 69  GEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEASGAPVDVFAYNTLVAGYCRYGRLDAA 128

Query: 318 REIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSG 377
           R +  SM      +T   Y  +I G C    V +A++L   ++  G + +V+TY  LL  
Sbjct: 129 RRLIASMPVPPDAYT---YTPIIRGLCDRGRVGDALALLDDMLQRGCQPSVVTYTVLLEA 185

Query: 378 LFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFG 437
           + ++   G A  + DEM+     P++ TYN++I+G+C+   V +A ++ + L    F+  
Sbjct: 186 VCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAKEILNRLSSYGFQPD 245

Query: 438 IEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLL 497
           I  +  ++ GLC A R D+   LF ++  K  VP  VT+ +++   CR G +E+A   L 
Sbjct: 246 IVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQ 305

Query: 498 YMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAK 557
            M ++GC PN    N +++   +  +     + L+ M     N  PD  +++ V+  L +
Sbjct: 306 QMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCN--PDTISYTTVLRGLCR 363

Query: 558 DEKYH 562
             ++ 
Sbjct: 364 AGRWE 368



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 78/285 (27%), Positives = 139/285 (48%), Gaps = 5/285 (1%)

Query: 279 INEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNI 338
           + EA  L+E    RG  PD +    L+   C  GR   A  +  +  + G    V +YN 
Sbjct: 55  LAEAARLVETSSSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEASGAPVDVFAYNT 114

Query: 339 LINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYN 398
           L+ GYC+   ++ A    R I S  V     TY  ++ GL   G+ G A  L D+M    
Sbjct: 115 LVAGYCRYGRLDAA---RRLIASMPVPPDAYTYTPIIRGLCDRGRVGDALALLDDMLQRG 171

Query: 399 VEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAW 458
            +P + TY +L++ +CK++   EA+ +   +        I  +N +I+G+C+ GR+D+A 
Sbjct: 172 CQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAK 231

Query: 459 ELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGF 518
           E+ ++L   G  P +V+Y+ ++ GLC   + +        M    C PN VTF+ L+  F
Sbjct: 232 EILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFF 291

Query: 519 LQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
            +     + +++L +M+  +    P+ T  +IV++ + K  +  +
Sbjct: 292 CRGGMVERAIQVLQQMS--QHGCTPNTTLCNIVINAICKQGRVDD 334


>gi|222628656|gb|EEE60788.1| hypothetical protein OsJ_14372 [Oryza sativa Japonica Group]
          Length = 748

 Score =  256 bits (655), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 163/523 (31%), Positives = 268/523 (51%), Gaps = 43/523 (8%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
           P   ++N L    +    +   +  ++++ S GL+P  +  N  I+        LC  NR
Sbjct: 225 PNNKTYNSLIYGYSTAGMWKESVRVFKEMSSSGLIPCVVNCNSFIH-------ALCRHNR 277

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTG-----NLSVALRLHKKMVSG------ 181
           IKEA  +F +M+  G +P++I+Y TL++G+   G     N  V L + K +V        
Sbjct: 278 IKEAKDIFDSMVLKGPKPNIISYSTLLHGYAAEGCFANMNSLVNLMVSKGIVPNHRFFNI 337

Query: 182 -------------------DYEN-GLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKG 221
                              D +N G+I  T   +++ +I SLC+ G +D A   F  M  
Sbjct: 338 LINAYARCGMMDKAMLIFEDMQNKGMIPDT--VTFATVISSLCRIGRLDDALHKFNHMVD 395

Query: 222 RGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLG-PRPNLLTFNVMIDCLCKGGKIN 280
            G+ P+  V   LI G C  G   +   L  EM++   P P +  F+ +I+ L K G++ 
Sbjct: 396 IGVPPSEAVYRCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLFKEGRVA 455

Query: 281 EANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILI 340
           E   +++LM+Q G  P+  T+NSLM+GYCLVG ++ A  +  +M S G +     Y  L+
Sbjct: 456 EGKDIMDLMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLV 515

Query: 341 NGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVE 400
           +GYCK   +++A++++R ++  GV+ T + YN +L GLFQA +   A+K+F EM      
Sbjct: 516 DGYCKNGRIDDALTVFRDMLHKGVKPTSVLYNIILHGLFQARRTTAAKKMFHEMIESGTT 575

Query: 401 PDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWEL 460
             + TY +++ GLC+NNC  EA  L   L     +F I  FN +I  + K GR   A EL
Sbjct: 576 VSIQTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMLKVGRRQEAKEL 635

Query: 461 FHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQ 520
           F  +   GLVPTV TY++MI  L ++   E+A++  + +EK+G AP+    N ++   L+
Sbjct: 636 FAAISTYGLVPTVHTYNLMISNLIKEESYEEADNLFISVEKSGRAPDSRLLNHIVRMLLK 695

Query: 521 NNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
             + +K    L  +   E NL  + +T S++  L +++ K  E
Sbjct: 696 KAEVAKASNYLSII--DENNLTLEASTISLLASLFSREGKCRE 736



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 138/528 (26%), Positives = 246/528 (46%), Gaps = 51/528 (9%)

Query: 72  SPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVEN 131
           +P I ++N+L     +    +  ++ + +L+  GL PD  + N LI+ F         E 
Sbjct: 119 APTIYTYNILIDCYRRMHRPELALAVFGRLLRTGLGPDVCSYNTLIDGFSK-------EG 171

Query: 132 RIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKT 191
            + +A  LF  MI   V PDV+TY +LI+G C+T  +  + R+ ++MV          + 
Sbjct: 172 EVDKAYELFYKMIEQSVSPDVVTYNSLIDGLCKTKEMVKSERVLEQMVDAGI------RP 225

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
           N  +Y+ +I      G+  ++  +F EM   G+ P VV C + IH  C     +E   +F
Sbjct: 226 NNKTYNSLIYGYSTAGMWKESVRVFKEMSSSGLIPCVVNCNSFIHALCRHNRIKEAKDIF 285

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
             M+  GP+PN+++++ ++      G     N L+ LM+ +G+ P+   +N L++ Y   
Sbjct: 286 DSMVLKGPKPNIISYSTLLHGYAAEGCFANMNSLVNLMVSKGIVPNHRFFNILINAYARC 345

Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
           G +D A  IF  M +KG     V++  +I+  C+I  +++A+  +  ++  GV  +   Y
Sbjct: 346 GMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVY 405

Query: 372 NTLLSG------------------------------------LFQAGQAGYAQKLFDEMK 395
             L+ G                                    LF+ G+    + + D M 
Sbjct: 406 RCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLFKEGRVAEGKDIMDLMV 465

Query: 396 LYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLD 455
                P++ T+N L++G C    ++EA  L   +     E    I+  L+DG CK GR+D
Sbjct: 466 QTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRID 525

Query: 456 NAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLM 515
           +A  +F  +  KG+ PT V Y+I++HGL +  +   A      M ++G   ++ T+  ++
Sbjct: 526 DALTVFRDMLHKGVKPTSVLYNIILHGLFQARRTTAAKKMFHEMIESGTTVSIQTYGVVL 585

Query: 516 HGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
            G  +NN T +   LL K+     N+  D  TF+IV+  + K  +  E
Sbjct: 586 GGLCRNNCTDEANMLLEKLF--AMNVKFDIITFNIVISAMLKVGRRQE 631



 Score =  204 bits (520), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 144/491 (29%), Positives = 237/491 (48%), Gaps = 16/491 (3%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
           N F+H  C+   I   EA+  F  M    P P I S++ L    A    +  + S    +
Sbjct: 266 NSFIHALCRHNRIK--EAKDIFDSMVLKGPKPNIISYSTLLHGYAAEGCFANMNSLVNLM 323

Query: 102 VSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLING 161
           VS G++P+    NILIN +       C    + +A  +F++M   G+ PD +T+ T+I+ 
Sbjct: 324 VSKGIVPNHRFFNILINAYAR-----C--GMMDKAMLIFEDMQNKGMIPDTVTFATVISS 376

Query: 162 FCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKG 221
            CR G L  AL     MV    + G+     +  Y  +I   C  G + KAKEL  EM  
Sbjct: 377 LCRIGRLDDALHKFNHMV----DIGVPPSEAV--YRCLIQGCCNHGELVKAKELISEMMN 430

Query: 222 RGI-NPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKIN 280
           + I  P V   +++I+     G   E   +   M+  G RPN++TFN +++  C  G + 
Sbjct: 431 KDIPPPGVKYFSSIINNLFKEGRVAEGKDIMDLMVQTGQRPNVVTFNSLMEGYCLVGNME 490

Query: 281 EANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILI 340
           EA  LL+ M   G+ P+ + Y +L+DGYC  GRID A  +F  M  KG K T V YNI++
Sbjct: 491 EAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYNIIL 550

Query: 341 NGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVE 400
           +G  +      A  ++ ++I +G   ++ TY  +L GL +      A  L +++   NV+
Sbjct: 551 HGLFQARRTTAAKKMFHEMIESGTTVSIQTYGVVLGGLCRNNCTDEANMLLEKLFAMNVK 610

Query: 401 PDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWEL 460
            D+ T+NI+I  + K    QEA +LF  +        +  +N +I  L K    + A  L
Sbjct: 611 FDIITFNIVISAMLKVGRRQEAKELFAAISTYGLVPTVHTYNLMISNLIKEESYEEADNL 670

Query: 461 FHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQ 520
           F  + + G  P     + ++  L +K ++ KA+++L  +++N       T + L   F +
Sbjct: 671 FISVEKSGRAPDSRLLNHIVRMLLKKAEVAKASNYLSIIDENNLTLEASTISLLASLFSR 730

Query: 521 NNKTSKVVELL 531
             K  + ++LL
Sbjct: 731 EGKCREHIKLL 741



 Score =  161 bits (408), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 114/404 (28%), Positives = 192/404 (47%), Gaps = 38/404 (9%)

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
           ++A+ L K+M      +       I++Y+I+ID   +    + A  +F  +   G+ P V
Sbjct: 98  ALAVELFKRMDRWACPHAAADAPTIYTYNILIDCYRRMHRPELALAVFGRLLRTGLGPDV 157

Query: 229 VVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLEL 288
               TLI GF   G  ++   LF +M++    P+++T+N +ID LCK  ++ ++  +LE 
Sbjct: 158 CSYNTLIDGFSKEGEVDKAYELFYKMIEQSVSPDVVTYNSLIDGLCKTKEMVKSERVLEQ 217

Query: 289 MIQRGLNPDRFTYNSLMDGYCLVG-----------------------------------R 313
           M+  G+ P+  TYNSL+ GY   G                                   R
Sbjct: 218 MVDAGIRPNNKTYNSLIYGYSTAGMWKESVRVFKEMSSSGLIPCVVNCNSFIHALCRHNR 277

Query: 314 IDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNT 373
           I  A++IF SM  KG K  ++SY+ L++GY          SL   ++S G+      +N 
Sbjct: 278 IKEAKDIFDSMVLKGPKPNIISYSTLLHGYAAEGCFANMNSLVNLMVSKGIVPNHRFFNI 337

Query: 374 LLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLF-HMLEMN 432
           L++   + G    A  +F++M+   + PD  T+  +I  LC+   + +A+  F HM+++ 
Sbjct: 338 LINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIG 397

Query: 433 KFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTY-SIMIHGLCRKGKLEK 491
                  ++ CLI G C  G L  A EL  ++  K + P  V Y S +I+ L ++G++ +
Sbjct: 398 -VPPSEAVYRCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLFKEGRVAE 456

Query: 492 ANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMA 535
             D +  M + G  PNVVTFN+LM G+       +   LL  MA
Sbjct: 457 GKDIMDLMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMA 500



 Score =  132 bits (331), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 81/251 (32%), Positives = 137/251 (54%), Gaps = 16/251 (6%)

Query: 317 AREIFLSMHSKGCKH------TVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVIT 370
           A E+F  M    C H      T+ +YNILI+ Y ++   E A++++ +++  G+   V +
Sbjct: 100 AVELFKRMDRWACPHAAADAPTIYTYNILIDCYRRMHRPELALAVFGRLLRTGLGPDVCS 159

Query: 371 YNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLE 430
           YNTL+ G  + G+   A +LF +M   +V PD+ TYN LIDGLCK    +E VK   +LE
Sbjct: 160 YNTLIDGFSKEGEVDKAYELFYKMIEQSVSPDVVTYNSLIDGLCK---TKEMVKSERVLE 216

Query: 431 MNKFEFGI----EIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRK 486
               + GI    + +N LI G   AG    +  +F ++   GL+P VV  +  IH LCR 
Sbjct: 217 -QMVDAGIRPNNKTYNSLIYGYSTAGMWKESVRVFKEMSSSGLIPCVVNCNSFIHALCRH 275

Query: 487 GKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDT 546
            ++++A D    M   G  PN+++++TL+HG+      + +  L++ M    + +VP+  
Sbjct: 276 NRIKEAKDIFDSMVLKGPKPNIISYSTLLHGYAAEGCFANMNSLVNLMV--SKGIVPNHR 333

Query: 547 TFSIVVDLLAK 557
            F+I+++  A+
Sbjct: 334 FFNILINAYAR 344


>gi|451798817|gb|AGF69112.1| PPR [Raphanus sativus]
          Length = 479

 Score =  256 bits (655), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 153/473 (32%), Positives = 249/473 (52%), Gaps = 42/473 (8%)

Query: 63  FGYMTHMQPSPPISSFN-LLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFG 121
           FG +T +   P + +FN LL G   ++R  +A+  F++        P+ +T   L+N   
Sbjct: 38  FGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLFHQMCK-----PNVVTFTTLMN--- 89

Query: 122 NKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSG 181
               GLC E R+ EA  L   M+  G++P+ ITYGT+++G C+ G+   AL L +KM   
Sbjct: 90  ----GLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEL 145

Query: 182 DYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCA 241
            +      K ++  YS IID L K+G    A+ LF+EM+ +GI P +V  + +I+GFC +
Sbjct: 146 SH-----IKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMINGFCSS 200

Query: 242 GNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTY 301
           G W E   L  EML     P+++TF+ +I+ L K G +N A  LL+ MI  G+ P+  T 
Sbjct: 201 GKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTC 260

Query: 302 NSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIIS 361
           N+L+DG C  G++  A E+F +M                     +++++   +       
Sbjct: 261 NTLLDGLCDSGKLKDALEMFKAMQKS------------------MMDIDATHAF------ 296

Query: 362 NGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQE 421
           NGV   V TYN L+SGL   G+   A++L++EM    + PD  TY+ +I+GLCK + + E
Sbjct: 297 NGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDE 356

Query: 422 AVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIH 481
           A ++F  +    F   I  FN LI G CKAG +D+  ELF ++ ++G+V   +TY  +I 
Sbjct: 357 ATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIR 416

Query: 482 GLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKM 534
           G  + G +  + D    M  +G  P+ +T   ++ G     +  K + +L ++
Sbjct: 417 GFRKVGNINGSLDIFQEMISSGVYPDTITIRNMLTGLWSKEELKKALAMLEEL 469



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 121/417 (29%), Positives = 211/417 (50%), Gaps = 53/417 (12%)

Query: 179 VSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGF 238
           +S + ++GL    +I+S++I+I   C    +  A   F ++   G +P +V   TL+HG 
Sbjct: 1   MSNNIKHGLQIPCDIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGL 60

Query: 239 CCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDR 298
           C      E   LF +M     +PN++TF  +++ LC+ G++ EA  LL+ M++ GL P++
Sbjct: 61  CVEDRVSEALDLFHQMC----KPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQ 116

Query: 299 FTYNSLMDGYCLV------------------------------------GRIDTAREIFL 322
            TY +++DG C +                                    GR   A+ +F+
Sbjct: 117 ITYGTIVDGMCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFI 176

Query: 323 SMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAG 382
            M  KG    +V+Y+ +ING+C      EA  L ++++   +   V+T++ L++ L + G
Sbjct: 177 EMQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEG 236

Query: 383 QAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLE-----------M 431
               AQ L  EM    V P++ T N L+DGLC +  +++A+++F  ++            
Sbjct: 237 DLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAF 296

Query: 432 NKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEK 491
           N  E  ++ +N LI GL   G+   A EL+ ++P +G+VP  VTYS MI+GLC++ +L++
Sbjct: 297 NGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDE 356

Query: 492 ANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTF 548
           A      M     +PN+VTFNTL+ G+ +       +EL  +M    R +V +  T+
Sbjct: 357 ATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMG--RRGIVANAITY 411



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 121/417 (29%), Positives = 204/417 (48%), Gaps = 42/417 (10%)

Query: 43  EFLHENCKSGIINLN-------------EARYFFGYMTHMQPSPPISSFNLLFGAVAKNR 89
           +  H+ CK  ++                EA      M      P   ++  +   + K  
Sbjct: 71  DLFHQMCKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMG 130

Query: 90  HYDAVISFYRKLVSIG-LLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGV 148
              + ++  RK+  +  + PD +  + +I+       GL  + R  +A  LF  M   G+
Sbjct: 131 DTVSALNLLRKMEELSHIKPDVVIYSAIID-------GLWKDGRHTDAQNLFIEMQDKGI 183

Query: 149 RPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKT--NIFSYSIIIDSLCKE 206
            PD++TY  +INGFC +G  S A RL ++M        L+ K   ++ ++S +I++L KE
Sbjct: 184 FPDIVTYSCMINGFCSSGKWSEAQRLLQEM--------LVRKISPDVVTFSGLINALVKE 235

Query: 207 GLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI----EMLDL----- 257
           G ++ A++L  EM   G+ P VV C TL+ G C +G  ++   +F      M+D+     
Sbjct: 236 GDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHA 295

Query: 258 --GPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRID 315
             G  P++ T+N++I  L   GK  EA  L E M  RG+ PD  TY+S+++G C   R+D
Sbjct: 296 FNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLD 355

Query: 316 TAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLL 375
            A ++F SM SK     +V++N LI GYCK   V++ + L+ ++   G+    ITY TL+
Sbjct: 356 EATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLI 415

Query: 376 SGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMN 432
            G  + G    +  +F EM    V PD  T   ++ GL     +++A+ +   L+M+
Sbjct: 416 RGFRKVGNINGSLDIFQEMISSGVYPDTITIRNMLTGLWSKEELKKALAMLEELQMS 472



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 101/357 (28%), Positives = 185/357 (51%), Gaps = 16/357 (4%)

Query: 262 NLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIF 321
           ++ +FN++I C C   K+  A      + + G +P   T+N+L+ G C+  R+  A ++F
Sbjct: 14  DIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLF 73

Query: 322 LSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQA 381
             M    CK  VV++  L+NG C+   V EA++L  +++ +G++   ITY T++ G+ + 
Sbjct: 74  HQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKM 129

Query: 382 GQAGYAQKLFDEM-KLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEI 440
           G    A  L  +M +L +++PD+  Y+ +IDGL K+    +A  LF  ++       I  
Sbjct: 130 GDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVT 189

Query: 441 FNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYME 500
           ++C+I+G C +G+   A  L  ++  + + P VVT+S +I+ L ++G L  A D L  M 
Sbjct: 190 YSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMI 249

Query: 501 KNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNL---------VPDDTTFSIV 551
            +G  PNVVT NTL+ G   + K    +E+   M +   ++          PD  T++I+
Sbjct: 250 SSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNIL 309

Query: 552 VDLLAKDEKYHECSAV-SKSSYRACLYVTIFQPSSLGSMIGCTVRLMPQPEMSDTLG 607
           +  L  + K+ E   +  +  +R  +  T+   S +  +   + RL    +M D++G
Sbjct: 310 ISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQS-RLDEATQMFDSMG 365


>gi|449439615|ref|XP_004137581.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g74580-like [Cucumis sativus]
          Length = 857

 Score =  256 bits (655), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 155/506 (30%), Positives = 260/506 (51%), Gaps = 18/506 (3%)

Query: 41  LNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRK 100
            N+ +H  CK G  N+ E+   F  +      P + +FN+    + +    D        
Sbjct: 219 FNKLIHVLCKKG--NVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLES 276

Query: 101 LVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLIN 160
           +VS GL PD ++ N LI C      G C  +++ EA      M+  GV P+  TY T+IN
Sbjct: 277 IVSEGLTPDVISYNTLI-C------GFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIIN 329

Query: 161 GFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMK 220
           GFC+ G +  A     K++      G I     F+YS +I+ LC +G +++A  +F E  
Sbjct: 330 GFCKAGMMQNA----DKILRDAMFKGFIPDE--FTYSSLINGLCNDGDMNRAMAVFYEAM 383

Query: 221 GRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKIN 280
            +G   ++++  TL+ G    G   +   L  +M++ G  P++ T+N++++ LCK G ++
Sbjct: 384 EKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLS 443

Query: 281 EANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILI 340
           +ANG+L   I +G  PD FT+N+L+DGYC    +D A EI  +M S G    V++YN L+
Sbjct: 444 DANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLL 503

Query: 341 NGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVE 400
           NG CK   ++  +  ++ ++  G    +ITYN L+    +  +   A +LF EMK   + 
Sbjct: 504 NGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLT 563

Query: 401 PDLSTYNILIDGLCKNNCVQEAVKLFHMLEMN-KFEFGIEIFNCLIDGLCKAGRLDNAWE 459
           PD+ T   LI GLC N  + +A +LF  +E   KF +   IFN +I+  C+   +  A +
Sbjct: 564 PDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCEKLNVSMAEK 623

Query: 460 LFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFL 519
           LFHK+      P   TY +MI   C+ G ++ A+ FLL     G  P+  T   +++   
Sbjct: 624 LFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLC 683

Query: 520 QNNKTSKVVELLHKMAEPERNLVPDD 545
             ++ S+ V +++ M   +  +VP++
Sbjct: 684 VTHRLSEAVVIINLMV--QNGIVPEE 707



 Score =  244 bits (623), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 149/526 (28%), Positives = 256/526 (48%), Gaps = 35/526 (6%)

Query: 56  LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNI 115
           + EA   F  M      P + S+N +   + +  ++      Y ++  IG+ PD  T  I
Sbjct: 92  VQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDIGIYPDVYTHTI 151

Query: 116 LINCFGNKER----------------------------GLCVENRIKEATWLFKNMIAFG 147
            +  F    R                            G   EN   EA  LF  M+  G
Sbjct: 152 RMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQG 211

Query: 148 VRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEG 207
           + PD++T+  LI+  C+ GN+  + +L  K++    + G+    N+F+++I I  LC++G
Sbjct: 212 ICPDILTFNKLIHVLCKKGNVQESEKLFSKVM----KRGVCP--NLFTFNIFIQGLCRKG 265

Query: 208 LVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFN 267
            +D+A  L   +   G+ P V+   TLI GFC      E      +M++ G  PN  T+N
Sbjct: 266 AIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYN 325

Query: 268 VMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSK 327
            +I+  CK G +  A+ +L   + +G  PD FTY+SL++G C  G ++ A  +F     K
Sbjct: 326 TIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEK 385

Query: 328 GCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYA 387
           G KH+++ YN L+ G  K   V +A+ L + ++ +G    + TYN +++GL + G    A
Sbjct: 386 GFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDA 445

Query: 388 QKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDG 447
             + ++       PD+ T+N LIDG CK   + +A+++   +  +     +  +N L++G
Sbjct: 446 NGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNG 505

Query: 448 LCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPN 507
           LCKA +LDN  + F  + +KG  P ++TY+I+I   C+  K+ +A +    M+  G  P+
Sbjct: 506 LCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPD 565

Query: 508 VVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
           +VT  TL+ G   N +  K  EL   + E E         F+I+++
Sbjct: 566 IVTLCTLICGLCSNGELDKAYELFVTI-EKEYKFSYSTAIFNIMIN 610



 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 151/485 (31%), Positives = 236/485 (48%), Gaps = 46/485 (9%)

Query: 135 EATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIF 194
           +A  ++  M   G+ PDV T+   +  FC TG  + ALRL   M       G   + N  
Sbjct: 129 QAHKVYMRMKDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNM------PGQGCEFNAV 182

Query: 195 SYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEM 254
           SY  +I    KE    +A  LF EM  +GI P ++    LIH  C  GN +E   LF ++
Sbjct: 183 SYCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKV 242

Query: 255 LDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRI 314
           +  G  PNL TFN+ I  LC+ G I+EA  LLE ++  GL PD  +YN+L+ G+C   ++
Sbjct: 243 MKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKL 302

Query: 315 DTAREIFLSMHSKGCKHTVVSYNILINGYC---------KIL------------------ 347
             A      M + G +    +YN +ING+C         KIL                  
Sbjct: 303 VEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSL 362

Query: 348 --------NVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNV 399
                   ++  AM+++ + +  G + ++I YNTL+ GL + G    A +L  +M  +  
Sbjct: 363 INGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGC 422

Query: 400 EPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWE 459
            PD+ TYN++++GLCK  C+ +A  + +          I  FN LIDG CK   +D A E
Sbjct: 423 SPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIE 482

Query: 460 LFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFL 519
           +   +   G+ P V+TY+ +++GLC+  KL+   D    M + GC PN++T+N L+  F 
Sbjct: 483 ILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFC 542

Query: 520 QNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKD---EKYHECSAVSKSSYRACL 576
           ++ K S+ +EL  +M    R L PD  T   ++  L  +   +K +E     +  Y+   
Sbjct: 543 KDRKVSEAMELFKEMK--TRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSY 600

Query: 577 YVTIF 581
              IF
Sbjct: 601 STAIF 605



 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 135/430 (31%), Positives = 221/430 (51%), Gaps = 10/430 (2%)

Query: 132 RIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVS-GDYENGLISK 190
           +++EA  +F+ M  +   P V +Y  ++N     G  S A +++ +M   G Y       
Sbjct: 91  KVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDIGIY------- 143

Query: 191 TNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGL 250
            ++++++I + S C  G    A  L   M G+G     V    +I GF       E   L
Sbjct: 144 PDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEAYHL 203

Query: 251 FIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCL 310
           F EML  G  P++LTFN +I  LCK G + E+  L   +++RG+ P+ FT+N  + G C 
Sbjct: 204 FDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCR 263

Query: 311 VGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVIT 370
            G ID A  +  S+ S+G    V+SYN LI G+CK   + EA     +++++GV     T
Sbjct: 264 KGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFT 323

Query: 371 YNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLE 430
           YNT+++G  +AG    A K+  +       PD  TY+ LI+GLC +  +  A+ +F+   
Sbjct: 324 YNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAM 383

Query: 431 MNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLE 490
              F+  I ++N L+ GL K G +  A +L   + + G  P + TY+++++GLC+ G L 
Sbjct: 384 EKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLS 443

Query: 491 KANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSI 550
            AN  L      GC P++ TFNTL+ G+ +     K +E+L  M      + PD  T++ 
Sbjct: 444 DANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTML--SHGITPDVITYNT 501

Query: 551 VVDLLAKDEK 560
           +++ L K  K
Sbjct: 502 LLNGLCKARK 511



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 60/265 (22%), Positives = 122/265 (46%), Gaps = 3/265 (1%)

Query: 300 TYNSLMDGYCLVGRIDTAREIFLSMHSK-GCKHTVVSYNILINGYCKILNVEEAMSLYRQ 358
           TY  +++   L G+ +   ++   M      K     Y  ++  Y +   V+EA++++ +
Sbjct: 42  TYKCMIEKLGLHGKFEAMEDVLAEMRKNVDSKMLEGVYIGIMRDYGRKGKVQEAVNVFER 101

Query: 359 IISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNC 418
           +       +V +YN +++ L + G    A K++  MK   + PD+ T+ I +   C    
Sbjct: 102 MDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDIGIYPDVYTHTIRMKSFCITGR 161

Query: 419 VQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSI 478
              A++L + +     EF    +  +I G  K      A+ LF ++ ++G+ P ++T++ 
Sbjct: 162 PTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNK 221

Query: 479 MIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPE 538
           +IH LC+KG ++++      + K G  PN+ TFN  + G  +     +   LL  +    
Sbjct: 222 LIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIV--S 279

Query: 539 RNLVPDDTTFSIVVDLLAKDEKYHE 563
             L PD  +++ ++    K  K  E
Sbjct: 280 EGLTPDVISYNTLICGFCKHSKLVE 304


>gi|224160015|ref|XP_002338159.1| predicted protein [Populus trichocarpa]
 gi|222871069|gb|EEF08200.1| predicted protein [Populus trichocarpa]
          Length = 368

 Score =  256 bits (655), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 133/336 (39%), Positives = 200/336 (59%), Gaps = 6/336 (1%)

Query: 143 MIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDS 202
           M+A G +PDV TY T+ING C+ G    A  L KKM           + ++ +YS IIDS
Sbjct: 1   MVARGYQPDVHTYTTIINGLCKIGETVAAAGLFKKMGEAG------CQPDVVTYSTIIDS 54

Query: 203 LCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPN 262
           LCK+  V++A ++F  MK +GI+P +    +LI G C    W E + +  EM+ L   PN
Sbjct: 55  LCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPN 114

Query: 263 LLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFL 322
           ++TF+++I+  CK G + EA G+L+ M + G+ P+  TY+SLM+GY L   +  AR++F 
Sbjct: 115 IVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFD 174

Query: 323 SMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAG 382
            M +KGCK  V SYNILINGYCK   + EA  L+ ++I  G+   +++YNTL+ GL Q G
Sbjct: 175 VMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLG 234

Query: 383 QAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFN 442
           +   A  LF  M      PDL TY+IL+DG CK   + +A +LF  ++    +  + ++N
Sbjct: 235 RLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYN 294

Query: 443 CLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSI 478
            LID +CK+  L  A +LF +L  +GL P +  + +
Sbjct: 295 ILIDAMCKSRNLKEARKLFSELFVQGLQPNMKHWKL 330



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 111/316 (35%), Positives = 175/316 (55%)

Query: 219 MKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGK 278
           M  RG  P V   TT+I+G C  G      GLF +M + G +P+++T++ +ID LCK  +
Sbjct: 1   MVARGYQPDVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRR 60

Query: 279 INEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNI 338
           +NEA  +   M  +G++P+ FTYNSL+ G C   R   A  +   M S      +V++++
Sbjct: 61  VNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSL 120

Query: 339 LINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYN 398
           LIN +CK  NV EA  + + +   GV   V+TY++L++G     +   A+KLFD M    
Sbjct: 121 LINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMITKG 180

Query: 399 VEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAW 458
            +PD+ +YNILI+G CK   + EA +LF+ +        I  +N LIDGLC+ GRL  A 
Sbjct: 181 CKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAH 240

Query: 459 ELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGF 518
           +LF  +   G +P + TYSI++ G C++G L KA      M+     PN+V +N L+   
Sbjct: 241 DLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAM 300

Query: 519 LQNNKTSKVVELLHKM 534
            ++    +  +L  ++
Sbjct: 301 CKSRNLKEARKLFSEL 316



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 110/353 (31%), Positives = 179/353 (50%), Gaps = 14/353 (3%)

Query: 190 KTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNG 249
           + ++ +Y+ II+ LCK G    A  LF +M   G  P VV  +T+I   C      E   
Sbjct: 7   QPDVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALD 66

Query: 250 LFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYC 309
           +F  M   G  PN+ T+N +I  LC   +  EA+ +L  M+   + P+  T++ L++ +C
Sbjct: 67  IFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFC 126

Query: 310 LVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVI 369
             G +  AR +  +M   G +  VV+Y+ L+NGY     V EA  L+  +I+ G +  V 
Sbjct: 127 KEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMITKGCKPDVF 186

Query: 370 TYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHML 429
           +YN L++G  +A + G A++LF+EM    + PD+ +YN LIDGLC+   ++EA  LF  +
Sbjct: 187 SYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNM 246

Query: 430 EMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKL 489
             N     +  ++ L+DG CK G L  A+ LF  +    L P +V Y+I+I  +C+   L
Sbjct: 247 LTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNL 306

Query: 490 EKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLV 542
           ++A      +   G  PN+              K  K+ E+  +MA    N +
Sbjct: 307 KEARKLFSELFVQGLQPNM--------------KHWKLFEIWKRMAALRMNFL 345



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 97/338 (28%), Positives = 180/338 (53%), Gaps = 13/338 (3%)

Query: 72  SPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVEN 131
            P + ++  +   + K     A    ++K+   G  PD +T + +I+        LC + 
Sbjct: 7   QPDVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIID-------SLCKDR 59

Query: 132 RIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKT 191
           R+ EA  +F  M A G+ P++ TY +LI G C       A  +  +M+S      L    
Sbjct: 60  RVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMS------LNIMP 113

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
           NI ++S++I+  CKEG V +A+ +   M   G+ P VV  ++L++G+       E   LF
Sbjct: 114 NIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLF 173

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
             M+  G +P++ ++N++I+  CK  +I EA  L   MI +GL PD  +YN+L+DG C +
Sbjct: 174 DVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQL 233

Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
           GR+  A ++F +M + G    + +Y+IL++G+CK   + +A  L+R + S  ++  ++ Y
Sbjct: 234 GRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMY 293

Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNIL 409
           N L+  + ++     A+KLF E+ +  ++P++  + + 
Sbjct: 294 NILIDAMCKSRNLKEARKLFSELFVQGLQPNMKHWKLF 331



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 86/284 (30%), Positives = 144/284 (50%), Gaps = 13/284 (4%)

Query: 56  LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNI 115
           +NEA   F YM     SP I ++N L   +     +    +   +++S+ ++P+ +T ++
Sbjct: 61  VNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSL 120

Query: 116 LINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLH 175
           LIN F       C E  + EA  + K M   GV P+V+TY +L+NG+     +  A +L 
Sbjct: 121 LINIF-------CKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLF 173

Query: 176 KKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLI 235
             M++         K ++FSY+I+I+  CK   + +AK+LF EM  +G+ P +V   TLI
Sbjct: 174 DVMITKG------CKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLI 227

Query: 236 HGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLN 295
            G C  G   E + LF  ML  G  P+L T+++++D  CK G + +A  L   M    L 
Sbjct: 228 DGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLK 287

Query: 296 PDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNIL 339
           P+   YN L+D  C    +  AR++F  +  +G +  +  + + 
Sbjct: 288 PNMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQPNMKHWKLF 331



 Score =  112 bits (281), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 72/215 (33%), Positives = 108/215 (50%), Gaps = 15/215 (6%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CK G  N+ EAR     MT M   P + +++ L    +           +  +++ G  P
Sbjct: 126 CKEG--NVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMITKGCKP 183

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           D  + NILIN       G C   RI EA  LF  MI  G+ PD+++Y TLI+G C+ G L
Sbjct: 184 DVFSYNILIN-------GYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRL 236

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
             A  L K M++    NG +   ++ +YSI++D  CK+G + KA  LF  M+   + P +
Sbjct: 237 REAHDLFKNMLT----NGNLP--DLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNM 290

Query: 229 VVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNL 263
           V+   LI   C + N +E   LF E+   G +PN+
Sbjct: 291 VMYNILIDAMCKSRNLKEARKLFSELFVQGLQPNM 325



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 42/137 (30%), Positives = 77/137 (56%), Gaps = 2/137 (1%)

Query: 434 FEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKAN 493
           ++  +  +  +I+GLCK G    A  LF K+ + G  P VVTYS +I  LC+  ++ +A 
Sbjct: 6   YQPDVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRRVNEAL 65

Query: 494 DFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
           D   YM+  G +PN+ T+N+L+ G    ++  +   +L++M     N++P+  TFS++++
Sbjct: 66  DIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMS--LNIMPNIVTFSLLIN 123

Query: 554 LLAKDEKYHECSAVSKS 570
           +  K+    E   V K+
Sbjct: 124 IFCKEGNVFEARGVLKT 140



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 45/154 (29%), Positives = 80/154 (51%), Gaps = 2/154 (1%)

Query: 400 EPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWE 459
           +PD+ TY  +I+GLCK      A  LF  +     +  +  ++ +ID LCK  R++ A +
Sbjct: 7   QPDVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALD 66

Query: 460 LFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFL 519
           +F  +  KG+ P + TY+ +I GLC   +  +A+  L  M      PN+VTF+ L++ F 
Sbjct: 67  IFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFC 126

Query: 520 QNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
           +     +   +L  M   E  + P+  T+S +++
Sbjct: 127 KEGNVFEARGVLKTMT--EMGVEPNVVTYSSLMN 158



 Score = 39.3 bits (90), Expect = 7.0,   Method: Compositional matrix adjust.
 Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 2/65 (3%)

Query: 499 MEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKD 558
           M   G  P+V T+ T+++G  +  +T     L  KM E      PD  T+S ++D L KD
Sbjct: 1   MVARGYQPDVHTYTTIINGLCKIGETVAAAGLFKKMGEA--GCQPDVVTYSTIIDSLCKD 58

Query: 559 EKYHE 563
            + +E
Sbjct: 59  RRVNE 63


>gi|302775073|ref|XP_002970953.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
 gi|300161664|gb|EFJ28279.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
          Length = 577

 Score =  256 bits (655), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 159/534 (29%), Positives = 252/534 (47%), Gaps = 51/534 (9%)

Query: 55  NLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLN 114
            + EA      +T    +P I+++N L   + K    +  I   RK+V  G  PD +T  
Sbjct: 1   KIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYT 60

Query: 115 ILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRL 174
            LI+  G ++R         EA  LFK M   G+  D + Y  LI    +TG +  A  +
Sbjct: 61  SLIDGLGKEKRSF-------EAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSV 113

Query: 175 HKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTL 234
           +K M S    +G +   ++ + S +ID L K G +  A  +F  M+ RG+ P  VV + L
Sbjct: 114 YKTMTS----HGCVP--DVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSAL 167

Query: 235 IHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGL 294
           IHG C A   +    +  +M      P+ +T+NV+ID LCK G +  A    + M++ G 
Sbjct: 168 IHGLCKARKMDCALEMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGC 227

Query: 295 NPDRFTYNSLMDGYCLVGRIDTAREIF----------LSMHS------------------ 326
            PD +TYN L+ G+C  G  D A              + +H+                  
Sbjct: 228 KPDVYTYNILISGFCKAGNTDAASHSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAV 287

Query: 327 --------KGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGL 378
                    GC  T+ +YN L+NG CK+  +EEA+ L R+I+ NG    V+TY +L+ GL
Sbjct: 288 ALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGL 347

Query: 379 FQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGI 438
            +  ++  A KLF EM L  +  D   Y  LI  L +   + +A  ++  +  +     +
Sbjct: 348 GKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDV 407

Query: 439 EIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLY 498
              + +IDGL KAGR+  A  +F  +  +GL P  V YS +IHGLC+  K++ A + L  
Sbjct: 408 VTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQ 467

Query: 499 MEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVV 552
           M+K  C P+ +T+N L+ G  ++           +M E      PD  T++I++
Sbjct: 468 MKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEA--GCKPDVYTYNILI 519



 Score =  231 bits (589), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 143/465 (30%), Positives = 226/465 (48%), Gaps = 44/465 (9%)

Query: 132 RIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKT 191
           +I+EA  L + + A G  P + TY  L+NG C+ G L  A+ L +K+V    +NG     
Sbjct: 1   KIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIV----DNGCTP-- 54

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
           ++ +Y+ +ID L KE    +A +LF EM  RG+    V  T LI      G   + + ++
Sbjct: 55  DVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVY 114

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
             M   G  P+++T + MID L K G+I  A  + + M  RGL P+   Y++L+ G C  
Sbjct: 115 KTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKA 174

Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
            ++D A E+   M    C    ++YN+LI+G CK  +VE A + + +++  G +  V TY
Sbjct: 175 RKMDCALEMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTY 234

Query: 372 NTLLSGLFQAGQAGYA-QKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLE 430
           N L+SG  +AG    A   L  E  +     D+ TY  ++D L KN  ++EAV L   + 
Sbjct: 235 NILISGFCKAGNTDAASHSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKIT 294

Query: 431 MNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRK---- 486
            N     I  +N L++GLCK GRL+ A +L  K+   G  P VVTY+ +I GL ++    
Sbjct: 295 ANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSF 354

Query: 487 -------------------------------GKLEKANDFLLYMEKNGCAPNVVTFNTLM 515
                                          GK+ +A+     M  +GC P+VVT +T++
Sbjct: 355 EAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMI 414

Query: 516 HGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEK 560
            G  +  +    V +   M    R L P++  +S ++  L K  K
Sbjct: 415 DGLSKAGRIGAAVRIFKSM--EARGLAPNEVVYSALIHGLCKARK 457



 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 133/449 (29%), Positives = 216/449 (48%), Gaps = 12/449 (2%)

Query: 55  NLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLN 114
            +  A   F  M     +P    ++ L   + K R  D  +    ++      PD +T N
Sbjct: 141 RIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYN 200

Query: 115 ILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRL 174
           +LI+       GLC    ++ A   F  M+  G +PDV TY  LI+GFC+ GN   A   
Sbjct: 201 VLID-------GLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAA--- 250

Query: 175 HKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTL 234
              +      NG     +I +Y+ I+D L K   +++A  L  ++   G  P +     L
Sbjct: 251 SHSLAQETTINGCT--IDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTPTIATYNAL 308

Query: 235 IHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGL 294
           ++G C  G  EE   L  +++D G  P+++T+  +ID L K  +  EA  L + M  RGL
Sbjct: 309 LNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGL 368

Query: 295 NPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMS 354
             D   Y +L+      G+I  A  ++ +M S GC   VV+ + +I+G  K   +  A+ 
Sbjct: 369 ALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVR 428

Query: 355 LYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLC 414
           +++ + + G+    + Y+ L+ GL +A +   A ++  +MK     PD  TYNILIDGLC
Sbjct: 429 IFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLC 488

Query: 415 KNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVV 474
           K+  V+ A   F  +     +  +  +N LI G CKAG  D A  +F  +        VV
Sbjct: 489 KSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSANVV 548

Query: 475 TYSIMIHGLCRKGKLEKANDFLLYMEKNG 503
           TY  +I GLC++ +L KA+ +  +M++ G
Sbjct: 549 TYGALISGLCKRRQLTKASLYFQHMKERG 577



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 121/435 (27%), Positives = 204/435 (46%), Gaps = 44/435 (10%)

Query: 209 VDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNV 268
           +++A  L  ++   G  P +     L++G C  G  EE   L  +++D G  P+++T+  
Sbjct: 2   IEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTS 61

Query: 269 MIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKG 328
           +ID L K  +  EA  L + M  RGL  D   Y +L+      G+I  A  ++ +M S G
Sbjct: 62  LIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHG 121

Query: 329 CKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQ 388
           C   VV+ + +I+G  K   +  A+ +++ + + G+    + Y+ L+ GL +A +   A 
Sbjct: 122 CVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCAL 181

Query: 389 KLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGL 448
           ++  +MK     PD  TYN+LIDGLCK+  V+ A   F  +     +  +  +N LI G 
Sbjct: 182 EMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGF 241

Query: 449 CKAGRLDNA-------------------------W-----------ELFHKLPQKGLVPT 472
           CKAG  D A                         W            L  K+   G  PT
Sbjct: 242 CKAGNTDAASHSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTPT 301

Query: 473 VVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLH 532
           + TY+ +++GLC+ G+LE+A D L  +  NGC P+VVT+ +L+ G  +  ++ +  +L  
Sbjct: 302 IATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFK 361

Query: 533 KMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKS-SYRACL-----YVTIFQPSSL 586
           +MA   R L  D   ++ ++  L +  K  + S+V K+ +   C+       T+    S 
Sbjct: 362 EMA--LRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSK 419

Query: 587 GSMIGCTVRLMPQPE 601
              IG  VR+    E
Sbjct: 420 AGRIGAAVRIFKSME 434



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 93/292 (31%), Positives = 152/292 (52%), Gaps = 5/292 (1%)

Query: 278 KINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYN 337
           KI EA  L+E +   G  P   TYN+L++G C +GR++ A ++   +   GC   VV+Y 
Sbjct: 1   KIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYT 60

Query: 338 ILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLY 397
            LI+G  K     EA  L++++   G+    + Y  L+  L Q G+   A  ++  M  +
Sbjct: 61  SLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSH 120

Query: 398 NVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNA 457
              PD+ T + +IDGL K   +  AV++F  +E         +++ LI GLCKA ++D A
Sbjct: 121 GCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCA 180

Query: 458 WELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHG 517
            E+  ++ +    P  +TY+++I GLC+ G +E A  F   M + GC P+V T+N L+ G
Sbjct: 181 LEMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISG 240

Query: 518 FLQNNKTSKVVELLHKMAEPE--RNLVPDDTTFSIVVDLLAKDEKYHECSAV 567
           F +   T       H +A+         D  T++ +VD LAK++K  E  A+
Sbjct: 241 FCKAGNTDAAS---HSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVAL 289


>gi|356523285|ref|XP_003530271.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g28010-like [Glycine max]
          Length = 703

 Score =  256 bits (655), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 173/567 (30%), Positives = 270/567 (47%), Gaps = 66/567 (11%)

Query: 55  NLNEARYFFGYMTHMQPSPPIS--SFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLT 112
           +L++A   F       P+ P S  + + L   + K R YDAV+S Y K+VS  +LP F +
Sbjct: 20  SLSDAVSLFHRTIDNDPTSPPSEPACSTLIDNLRKARQYDAVVSVYHKMVSALVLPRFTS 79

Query: 113 LNILINCFGNKE----------------------------RGLCVENRIKEATWLFKNMI 144
           L+ L   F N                              +G C   +  +A  LF  M 
Sbjct: 80  LSALTESFVNTHHPSFAFSVLSLMTKRGFGVNVYNLNLVLKGFCRSGQCDKAMSLFSQMK 139

Query: 145 A--FGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVS-GDYENGLIS------------ 189
                V PD +TY TL+NGFC+   L+ A  L + M   GD    L++            
Sbjct: 140 RNYDCVVPDCVTYNTLVNGFCKAKRLAEARVLFEAMKKGGDCRPNLVTYSVLIDCYCKSG 199

Query: 190 -----------------KTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCT 232
                            K ++F YS +I + C EG ++  +ELF EM  R ++P VV  +
Sbjct: 200 EVGEGLGLLEEMEREGLKADVFVYSSLISAFCGEGDIETGRELFDEMLRRKVSPNVVTYS 259

Query: 233 TLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQR 292
            L+ G    G W E + +  +M   G RP+++ + V+ D LCK G+  +A  +L+LM+Q+
Sbjct: 260 CLMQGLGRTGRWREASEMLKDMTARGVRPDVVAYTVLADGLCKNGRAGDAIKVLDLMVQK 319

Query: 293 GLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEA 352
           G  P   TYN +++G C   R+D A  +   M  KG K   V+YN L+ G C    + EA
Sbjct: 320 GEEPGTLTYNVVVNGLCKEDRMDDAFGVVEMMVKKGKKPDAVTYNTLLKGLCGAGKIHEA 379

Query: 353 MSLYRQIISNG--VRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILI 410
           M L++ ++S    V+  V T N L+ GL + G+   A ++   M    ++ ++ TYN LI
Sbjct: 380 MDLWKLLLSEKFHVKPDVFTCNNLIQGLCKEGRVHDAARIHSSMVEMGLQGNIVTYNFLI 439

Query: 411 DGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLV 470
           +G      + EA+KL+     + F      ++ +I+GLCK   L  A  LF K+   G+ 
Sbjct: 440 EGYLAARKLIEALKLWKYAVESGFSPNSMTYSVMINGLCKMQMLSVARGLFCKMKDSGIR 499

Query: 471 PTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVEL 530
           PTV+ Y+ ++  LCR+  LE+A      M       +VV+FN ++ G L+        EL
Sbjct: 500 PTVIDYNALMTSLCREDSLEQARSLFQEMRNVNHNVDVVSFNIIIDGTLKAGDVKSAKEL 559

Query: 531 LHKMAEPERNLVPDDTTFSIVVDLLAK 557
           L +M     +LVPD  TFSI+++  +K
Sbjct: 560 LSEMF--MMDLVPDAVTFSILINRFSK 584



 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 124/414 (29%), Positives = 209/414 (50%), Gaps = 8/414 (1%)

Query: 125 RGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYE 184
           +GL    R +EA+ + K+M A GVRPDV+ Y  L +G C+ G    A+++   MV    E
Sbjct: 263 QGLGRTGRWREASEMLKDMTARGVRPDVVAYTVLADGLCKNGRAGDAIKVLDLMVQKGEE 322

Query: 185 NGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNW 244
            G ++      Y+++++ LCKE  +D A  +   M  +G  P  V   TL+ G C AG  
Sbjct: 323 PGTLT------YNVVVNGLCKEDRMDDAFGVVEMMVKKGKKPDAVTYNTLLKGLCGAGKI 376

Query: 245 EEVNGLFIEMLD--LGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYN 302
            E   L+  +L      +P++ T N +I  LCK G++++A  +   M++ GL  +  TYN
Sbjct: 377 HEAMDLWKLLLSEKFHVKPDVFTCNNLIQGLCKEGRVHDAARIHSSMVEMGLQGNIVTYN 436

Query: 303 SLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISN 362
            L++GY    ++  A +++      G     ++Y+++ING CK+  +  A  L+ ++  +
Sbjct: 437 FLIEGYLAARKLIEALKLWKYAVESGFSPNSMTYSVMINGLCKMQMLSVARGLFCKMKDS 496

Query: 363 GVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEA 422
           G+R TVI YN L++ L +      A+ LF EM+  N   D+ ++NI+IDG  K   V+ A
Sbjct: 497 GIRPTVIDYNALMTSLCREDSLEQARSLFQEMRNVNHNVDVVSFNIIIDGTLKAGDVKSA 556

Query: 423 VKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHG 482
            +L   + M         F+ LI+   K G LD A  L+ K+   G VP VV +  ++ G
Sbjct: 557 KELLSEMFMMDLVPDAVTFSILINRFSKLGMLDEAMGLYEKMVSCGHVPGVVVFDSLLKG 616

Query: 483 LCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAE 536
              KG+ EK    L  M       +    +T++      ++   V ++L K ++
Sbjct: 617 YGLKGETEKIISLLHQMADKDVVLDSKLTSTILACLCHMSRNLDVEKILPKFSQ 670



 Score =  174 bits (442), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 104/436 (23%), Positives = 207/436 (47%), Gaps = 15/436 (3%)

Query: 55  NLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLN 114
           ++   R  F  M   + SP + +++ L   + +   +       + + + G+ PD +   
Sbjct: 235 DIETGRELFDEMLRRKVSPNVVTYSCLMQGLGRTGRWREASEMLKDMTARGVRPDVVAYT 294

Query: 115 ILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRL 174
           +L +       GLC   R  +A  +   M+  G  P  +TY  ++NG C+   +  A  +
Sbjct: 295 VLAD-------GLCKNGRAGDAIKVLDLMVQKGEEPGTLTYNVVVNGLCKEDRMDDAFGV 347

Query: 175 HKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELF--LEMKGRGINPAVVVCT 232
            + MV          K +  +Y+ ++  LC  G + +A +L+  L  +   + P V  C 
Sbjct: 348 VEMMVKKG------KKPDAVTYNTLLKGLCGAGKIHEAMDLWKLLLSEKFHVKPDVFTCN 401

Query: 233 TLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQR 292
            LI G C  G   +   +   M+++G + N++T+N +I+      K+ EA  L +  ++ 
Sbjct: 402 NLIQGLCKEGRVHDAARIHSSMVEMGLQGNIVTYNFLIEGYLAARKLIEALKLWKYAVES 461

Query: 293 GLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEA 352
           G +P+  TY+ +++G C +  +  AR +F  M   G + TV+ YN L+   C+  ++E+A
Sbjct: 462 GFSPNSMTYSVMINGLCKMQMLSVARGLFCKMKDSGIRPTVIDYNALMTSLCREDSLEQA 521

Query: 353 MSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDG 412
            SL++++ +      V+++N ++ G  +AG    A++L  EM + ++ PD  T++ILI+ 
Sbjct: 522 RSLFQEMRNVNHNVDVVSFNIIIDGTLKAGDVKSAKELLSEMFMMDLVPDAVTFSILINR 581

Query: 413 LCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPT 472
             K   + EA+ L+  +       G+ +F+ L+ G    G  +    L H++  K +V  
Sbjct: 582 FSKLGMLDEAMGLYEKMVSCGHVPGVVVFDSLLKGYGLKGETEKIISLLHQMADKDVVLD 641

Query: 473 VVTYSIMIHGLCRKGK 488
               S ++  LC   +
Sbjct: 642 SKLTSTILACLCHMSR 657



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 103/378 (27%), Positives = 190/378 (50%), Gaps = 5/378 (1%)

Query: 197 SIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLD 256
           S +ID+L K    D    ++ +M    + P     + L   F    +      +   M  
Sbjct: 46  STLIDNLRKARQYDAVVSVYHKMVSALVLPRFTSLSALTESFVNTHHPSFAFSVLSLMTK 105

Query: 257 LGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLN---PDRFTYNSLMDGYCLVGR 313
            G   N+   N+++   C+ G+ ++A  L   M +R  +   PD  TYN+L++G+C   R
Sbjct: 106 RGFGVNVYNLNLVLKGFCRSGQCDKAMSLFSQM-KRNYDCVVPDCVTYNTLVNGFCKAKR 164

Query: 314 IDTAREIFLSMHSKG-CKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYN 372
           +  AR +F +M   G C+  +V+Y++LI+ YCK   V E + L  ++   G++  V  Y+
Sbjct: 165 LAEARVLFEAMKKGGDCRPNLVTYSVLIDCYCKSGEVGEGLGLLEEMEREGLKADVFVYS 224

Query: 373 TLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMN 432
           +L+S     G     ++LFDEM    V P++ TY+ L+ GL +    +EA ++   +   
Sbjct: 225 SLISAFCGEGDIETGRELFDEMLRRKVSPNVVTYSCLMQGLGRTGRWREASEMLKDMTAR 284

Query: 433 KFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKA 492
                +  +  L DGLCK GR  +A ++   + QKG  P  +TY+++++GLC++ +++ A
Sbjct: 285 GVRPDVVAYTVLADGLCKNGRAGDAIKVLDLMVQKGEEPGTLTYNVVVNGLCKEDRMDDA 344

Query: 493 NDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVV 552
              +  M K G  P+ VT+NTL+ G     K  + ++L   +   + ++ PD  T + ++
Sbjct: 345 FGVVEMMVKKGKKPDAVTYNTLLKGLCGAGKIHEAMDLWKLLLSEKFHVKPDVFTCNNLI 404

Query: 553 DLLAKDEKYHECSAVSKS 570
             L K+ + H+ + +  S
Sbjct: 405 QGLCKEGRVHDAARIHSS 422



 Score = 52.4 bits (124), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 47/191 (24%), Positives = 84/191 (43%), Gaps = 6/191 (3%)

Query: 400 EPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWE 459
           EP  ST   LID L K       V ++H +            + L +          A+ 
Sbjct: 42  EPACST---LIDNLRKARQYDAVVSVYHKMVSALVLPRFTSLSALTESFVNTHHPSFAFS 98

Query: 460 LFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKN-GCA-PNVVTFNTLMHG 517
           +   + ++G    V   ++++ G CR G+ +KA      M++N  C  P+ VT+NTL++G
Sbjct: 99  VLSLMTKRGFGVNVYNLNLVLKGFCRSGQCDKAMSLFSQMKRNYDCVVPDCVTYNTLVNG 158

Query: 518 FLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKSSYRACLY 577
           F +  + ++   L   M +   +  P+  T+S+++D   K  +  E   + +   R  L 
Sbjct: 159 FCKAKRLAEARVLFEAMKKGG-DCRPNLVTYSVLIDCYCKSGEVGEGLGLLEEMEREGLK 217

Query: 578 VTIFQPSSLGS 588
             +F  SSL S
Sbjct: 218 ADVFVYSSLIS 228


>gi|302820627|ref|XP_002991980.1| hypothetical protein SELMODRAFT_162081 [Selaginella moellendorffii]
 gi|300140222|gb|EFJ06948.1| hypothetical protein SELMODRAFT_162081 [Selaginella moellendorffii]
          Length = 509

 Score =  256 bits (654), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 151/475 (31%), Positives = 248/475 (52%), Gaps = 19/475 (4%)

Query: 90  HYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVR 149
           H +A   F  +LV++   PD  T   LI       RG C   +I +A  L   M A G+ 
Sbjct: 33  HREAYRVFKDELVTL-FRPDDFTYGTLI-------RGFCKAEQIPQAVNLLGEMKAAGIT 84

Query: 150 PDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLV 209
           P ++T+G+LI   C       AL++  +M+       +  K + F Y+++I  LCK   +
Sbjct: 85  PTIVTFGSLIRKLCELNFTDKALQIFHQMID------MKVKPDAFLYTVVIGHLCKINKL 138

Query: 210 DKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVM 269
           D A   F  M   G  P  V  T L+H    A  WE+ + +F EML  G  P L+T+  +
Sbjct: 139 DLAASYFERMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPELVTYATV 198

Query: 270 IDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGC 329
           ++  CK G+I++A  L+  +   G +P    Y++L+DG C   R D ARE+F    + G 
Sbjct: 199 VNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHDEARELF--EMAAGD 256

Query: 330 KHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQK 389
              V+ Y   I+G CK   ++EA +++ ++I  G     ++YN ++  L +  +   A++
Sbjct: 257 VQDVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDNRVSEAKE 316

Query: 390 LFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEA-VKLFHMLEMNKFEFGIEIFNCLIDGL 448
           L D+       P +    +L+DGLCK+  V+EA V L  MLE       +  ++ +IDGL
Sbjct: 317 LMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLETGDRAPSVVTYSAVIDGL 376

Query: 449 CKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNV 508
           CKA RLD+A+ +  K+ + G VP VVTY+ +I   C+ G+L++A +    M + GCA +V
Sbjct: 377 CKADRLDDAYVVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDEARELFQRMHERGCALDV 436

Query: 509 VTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
           V +N L+ G+ +  K  + + ++ +MA   R + P+  + S +VD L K+ +  E
Sbjct: 437 VAYNILIRGYCRAAKVDEAIAMIEEMA--GRGIQPNVVSLSTIVDGLCKESRVEE 489



 Score =  201 bits (512), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 118/347 (34%), Positives = 187/347 (53%), Gaps = 17/347 (4%)

Query: 57  NEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNIL 116
            +    F  M     SP + ++  +     K    D  +S  R+L   G  P     + L
Sbjct: 174 EQGHQIFEEMLSKGHSPELVTYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTL 233

Query: 117 INCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHK 176
           I+       GLC  +R  EA  LF+  +A G   DVI Y + I+G C+ G L  A  +H 
Sbjct: 234 ID-------GLCKHDRHDEARELFE--MAAGDVQDVIVYTSFISGLCKAGKLDEAKAVHV 284

Query: 177 KMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIH 236
           KM+    E G     +  SY++II SLCK+  V +AKEL  +   R   P V VCT L+ 
Sbjct: 285 KMI----EAG--CAPDPVSYNVIIYSLCKDNRVSEAKELMDQAMERKCMPGVPVCTVLVD 338

Query: 237 GFCCAGNWEEVNGLFIEMLDLGPR-PNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLN 295
           G C +   EE   +   ML+ G R P+++T++ +ID LCK  ++++A  +L+ M + G  
Sbjct: 339 GLCKSRRVEEACVILERMLETGDRAPSVVTYSAVIDGLCKADRLDDAYVVLQKMRRAGCV 398

Query: 296 PDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSL 355
           PD  TY +++D +C VGR+D ARE+F  MH +GC   VV+YNILI GYC+   V+EA+++
Sbjct: 399 PDVVTYTAIIDAFCKVGRLDEARELFQRMHERGCALDVVAYNILIRGYCRAAKVDEAIAM 458

Query: 356 YRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPD 402
             ++   G++  V++ +T++ GL +  +   A+ L ++M   ++ PD
Sbjct: 459 IEEMAGRGIQPNVVSLSTIVDGLCKESRVEEARLLMEKMNFESL-PD 504



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 104/383 (27%), Positives = 185/383 (48%), Gaps = 3/383 (0%)

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
           N ++ + +++    +G   +A  +F +       P      TLI GFC A    +   L 
Sbjct: 16  NTYTCNSLLEVFVNDGCHREAYRVFKDELVTLFRPDDFTYGTLIRGFCKAEQIPQAVNLL 75

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
            EM   G  P ++TF  +I  LC+    ++A  +   MI   + PD F Y  ++   C +
Sbjct: 76  GEMKAAGITPTIVTFGSLIRKLCELNFTDKALQIFHQMIDMKVKPDAFLYTVVIGHLCKI 135

Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
            ++D A   F  M   GC    V+Y +L++   K    E+   ++ +++S G    ++TY
Sbjct: 136 NKLDLAASYFERMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPELVTY 195

Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
            T+++G  +AG+   A  L   +K     P  S Y+ LIDGLCK++   EA +LF M   
Sbjct: 196 ATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHDEARELFEMAAG 255

Query: 432 NKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEK 491
           +  +  + ++   I GLCKAG+LD A  +  K+ + G  P  V+Y+++I+ LC+  ++ +
Sbjct: 256 DVQD--VIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDNRVSE 313

Query: 492 ANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIV 551
           A + +    +  C P V     L+ G  ++ +  +   +L +M E   +  P   T+S V
Sbjct: 314 AKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLETG-DRAPSVVTYSAV 372

Query: 552 VDLLAKDEKYHECSAVSKSSYRA 574
           +D L K ++  +   V +   RA
Sbjct: 373 IDGLCKADRLDDAYVVLQKMRRA 395



 Score = 44.7 bits (104), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 25/95 (26%), Positives = 47/95 (49%), Gaps = 9/95 (9%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CK G   L+EAR  F  M     +  + ++N+L     +    D  I+   ++   G+ P
Sbjct: 412 CKVG--RLDEARELFQRMHERGCALDVVAYNILIRGYCRAAKVDEAIAMIEEMAGRGIQP 469

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNM 143
           + ++L+ +++       GLC E+R++EA  L + M
Sbjct: 470 NVVSLSTIVD-------GLCKESRVEEARLLMEKM 497


>gi|302758676|ref|XP_002962761.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
 gi|300169622|gb|EFJ36224.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
          Length = 707

 Score =  256 bits (654), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 170/562 (30%), Positives = 268/562 (47%), Gaps = 53/562 (9%)

Query: 36  SPET-QLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAV 94
           +P+T   N  +   CK+G      A      M      P   ++N L   + K ++ D  
Sbjct: 42  TPDTVTFNSIMDGLCKAG--KFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRA 99

Query: 95  ISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVIT 154
            +   + VS G +PD +T +IL +       GLC   RI EA  L K M   G  P+++T
Sbjct: 100 KTLVDEFVSSGFVPDVVTYSILAD-------GLCKRGRIDEAFELVKEMSGNGCTPNLVT 152

Query: 155 YGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKE 214
           Y TLI+G C+      A  L + +VS    +G +   ++ +Y+II+D LCKEG +DKA +
Sbjct: 153 YNTLIDGLCKASKTEKAYELLETLVS----SGFVP--DVVTYTIIVDGLCKEGRLDKALK 206

Query: 215 LFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLD------------------ 256
           +   M  RG  P+V+  T L+ G C  G  +E + +F EM+                   
Sbjct: 207 MVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYC 266

Query: 257 --------------LGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYN 302
                         +   P +  +N ++D  CK G+++E   + E M  RG  P+  TYN
Sbjct: 267 KSSRTKEAQKVVDGIRGTPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYN 326

Query: 303 SLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISN 362
            +MDG C  G++D A     SMHS GC   VVSYNI+I+G  K    +EA  +  Q+I  
Sbjct: 327 IVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQA 386

Query: 363 GVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEA 422
           G+    +TYNTL++   +  +   A  +   M    V+PD  TYN LI GL + N + +A
Sbjct: 387 GIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDA 446

Query: 423 VKLFH-MLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIH 481
            +L H ML           +N +ID LCK G L  A  L   +   G+    VTY+I I 
Sbjct: 447 YELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFID 506

Query: 482 GLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNL 541
            LC++G+L++A+  L  M+      + V++ T++ G  +  +  +  +L  +M    + L
Sbjct: 507 RLCKEGRLDEASSLLSEMDT---LRDEVSYTTVIIGLCKAEQLDRASKLAREMVAV-KGL 562

Query: 542 VPDDTTFSIVVDLLAKDEKYHE 563
                TF++++D   K ++  E
Sbjct: 563 CITSHTFNLLIDAFTKTKRLDE 584



 Score =  245 bits (626), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 134/427 (31%), Positives = 232/427 (54%), Gaps = 11/427 (2%)

Query: 148 VRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEG 207
           V PDV TY  LI+G C+      A  +  +MV    + G+   T   +++ I+D LCK G
Sbjct: 6   VAPDVFTYNILIDGLCKASKTDKASEMLHEMV----DRGVTPDT--VTFNSIMDGLCKAG 59

Query: 208 LVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFN 267
             ++A  L   M  R   P+     TLI G C   N +    L  E +  G  P+++T++
Sbjct: 60  KFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYS 119

Query: 268 VMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSK 327
           ++ D LCK G+I+EA  L++ M   G  P+  TYN+L+DG C   + + A E+  ++ S 
Sbjct: 120 ILADGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSS 179

Query: 328 GCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYA 387
           G    VV+Y I+++G CK   +++A+ +   ++  G   +VITY  L+ GL + G+   A
Sbjct: 180 GFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEA 239

Query: 388 QKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDG 447
             +F EM   +   D   Y  L++G CK++  +EA K+   +    +   I+++N L+DG
Sbjct: 240 HHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPY---IDVYNALMDG 296

Query: 448 LCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPN 507
            CK GRLD    +F  +  +G VP + TY+I++ GLC+ GK+++A  FL  M   GC P+
Sbjct: 297 YCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPD 356

Query: 508 VVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAV 567
           VV++N ++ G  + +K  +  ++L +M +    + PD  T++ ++    K+E++ +   +
Sbjct: 357 VVSYNIIIDGLFKASKPKEARQVLDQMIQA--GIPPDAVTYNTLMAQFCKEERFDDAVGI 414

Query: 568 SKSSYRA 574
            K+  +A
Sbjct: 415 LKNMIKA 421



 Score =  239 bits (609), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 157/566 (27%), Positives = 268/566 (47%), Gaps = 74/566 (13%)

Query: 66  MTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILIN--CFGNK 123
           M   + +P + ++N+L   + K    D       ++V  G+ PD +T N +++  C   K
Sbjct: 1   MNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGK 60

Query: 124 ------------ER--------------GLCVENRIKEATWLFKNMIAFGVRPDVITYGT 157
                       ER              GLC +  +  A  L    ++ G  PDV+TY  
Sbjct: 61  FERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSI 120

Query: 158 LINGFCRTGNLSVALRLHKKMVSGDYENGLI------------SKT-------------- 191
           L +G C+ G +  A  L K+M        L+            SKT              
Sbjct: 121 LADGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSG 180

Query: 192 ---NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVN 248
              ++ +Y+II+D LCKEG +DKA ++   M  RG  P+V+  T L+ G C  G  +E +
Sbjct: 181 FVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAH 240

Query: 249 GLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGY 308
            +F EM+      + L +  +++  CK  +  EA  +++ +  RG  P    YN+LMDGY
Sbjct: 241 HIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGI--RG-TPYIDVYNALMDGY 297

Query: 309 CLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTV 368
           C  GR+D    +F  M  +GC   + +YNI+++G CK   V+EA      + S G    V
Sbjct: 298 CKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDV 357

Query: 369 ITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHM 428
           ++YN ++ GLF+A +   A+++ D+M    + PD  TYN L+   CK     +AV +   
Sbjct: 358 VSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILK- 416

Query: 429 LEMNKFEFGIE----IFNCLIDGLCKAGRLDNAWELFHKLPQKG-LVPTVVTYSIMIHGL 483
              N  + G++     +N LI GL +  RL +A+EL H++ + G +V    TY+ +I  L
Sbjct: 417 ---NMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRL 473

Query: 484 CRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVP 543
           C++G L++A   + +M  +G   N VT+N  +    +  +  +   LL +M     + + 
Sbjct: 474 CKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEM-----DTLR 528

Query: 544 DDTTFSIVVDLLAKDEKYHECSAVSK 569
           D+ +++ V+  L K E+    S +++
Sbjct: 529 DEVSYTTVIIGLCKAEQLDRASKLAR 554



 Score =  231 bits (589), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 158/550 (28%), Positives = 247/550 (44%), Gaps = 69/550 (12%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CK G   ++EA      M+    +P + ++N L   + K    +        LVS G +P
Sbjct: 126 CKRG--RIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSGFVP 183

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           D +T  I+++       GLC E R+ +A  + + M+  G  P VITY  L+ G CRTG +
Sbjct: 184 DVVTYTIIVD-------GLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRV 236

Query: 169 SVALRLHKKMVSGDYE--------------------------NGLISKTNIFSYSIIIDS 202
             A  + K+MVS D                            +G+     I  Y+ ++D 
Sbjct: 237 DEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPYIDVYNALMDG 296

Query: 203 LCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPN 262
            CKEG +D+   +F +M  RG  P +     ++ G C  G  +E       M   G  P+
Sbjct: 297 YCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPD 356

Query: 263 LLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFL 322
           ++++N++ID L K  K  EA  +L+ MIQ G+ PD  TYN+LM  +C   R D A  I  
Sbjct: 357 VVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILK 416

Query: 323 SMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNG-VRQTVITYNTLLSGLFQA 381
           +M   G     V+YN LI+G  +   + +A  L  +++ NG V     TYNT++  L + 
Sbjct: 417 NMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKE 476

Query: 382 GQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGI--- 438
           G    A  L D M  + VE +  TYNI ID LCK   + EA  L   ++  + E      
Sbjct: 477 GCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEMDTLRDEVSYTTV 536

Query: 439 ------------------------------EIFNCLIDGLCKAGRLDNAWELFHKLPQKG 468
                                           FN LID   K  RLD A  L   + Q+G
Sbjct: 537 IIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLELMVQRG 596

Query: 469 LVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVV 528
             P+V+TY+++I  LC+  K++KA +    M   G   + V++  L++G     +  + +
Sbjct: 597 CSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEAL 656

Query: 529 ELLHKMAEPE 538
           ++L +MA  +
Sbjct: 657 QVLEEMASSD 666



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 100/293 (34%), Positives = 151/293 (51%), Gaps = 3/293 (1%)

Query: 289 MIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILN 348
           M +R + PD FTYN L+DG C   + D A E+   M  +G     V++N +++G CK   
Sbjct: 1   MNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGK 60

Query: 349 VEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNI 408
            E A SL   +     R +  TYNTL+SGL +      A+ L DE       PD+ TY+I
Sbjct: 61  FERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSI 120

Query: 409 LIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKG 468
           L DGLCK   + EA +L   +  N     +  +N LIDGLCKA + + A+EL   L   G
Sbjct: 121 LADGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSG 180

Query: 469 LVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVV 528
            VP VVTY+I++ GLC++G+L+KA   +  M K GC P+V+T+  LM G  +  +  +  
Sbjct: 181 FVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAH 240

Query: 529 ELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKSSYRACLYVTIF 581
            +  +M    ++   D   +  +V+   K  +  E   V     R   Y+ ++
Sbjct: 241 HIFKEMV--SKDCTADALAYVSLVNGYCKSSRTKEAQKVV-DGIRGTPYIDVY 290


>gi|451798815|gb|AGF69111.1| PPR [Raphanus sativus]
          Length = 479

 Score =  256 bits (653), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 152/473 (32%), Positives = 249/473 (52%), Gaps = 42/473 (8%)

Query: 63  FGYMTHMQPSPPISSFN-LLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFG 121
           FG +T +   P + +FN LL G   ++R  +A+  F++        P+ +T   L+N   
Sbjct: 38  FGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLFHQMCK-----PNVVTFTTLMN--- 89

Query: 122 NKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSG 181
               GLC E R+ EA  L   M+  G++P+ ITYGT+++G C+ G+   AL L +KM   
Sbjct: 90  ----GLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEL 145

Query: 182 DYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCA 241
            +      K ++  YS IID L K+G    A+ LF+EM+ +GI P +V  + +I+GFC +
Sbjct: 146 SH-----IKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMINGFCSS 200

Query: 242 GNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTY 301
           G W E   L  EML     P+++TF+ +I+ L K G +N A  LL+ MI  G+ P+  T 
Sbjct: 201 GKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTC 260

Query: 302 NSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIIS 361
           N+L+DG C  G++  A E+F +M                     +++++   +       
Sbjct: 261 NTLLDGLCDSGKLKDALEMFKAMQKS------------------MMDIDATHAF------ 296

Query: 362 NGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQE 421
           NGV   V TYN L+SGL   G+   A++L++EM    + PD  TY+ +I+GLCK + + E
Sbjct: 297 NGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDE 356

Query: 422 AVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIH 481
           A ++F  +    F   I  FN LI G CKAG +D+  ELF ++ ++G+V   +TY  +I 
Sbjct: 357 ATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIR 416

Query: 482 GLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKM 534
           G  + G +  + D    M  +G  P+ +T   ++ G     +  + + +L ++
Sbjct: 417 GFRKVGNINGSLDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRALAMLEEL 469



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 121/417 (29%), Positives = 211/417 (50%), Gaps = 53/417 (12%)

Query: 179 VSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGF 238
           +S + ++GL    +I+S++I+I   C    +  A   F ++   G +P +V   TL+HG 
Sbjct: 1   MSNNIKHGLQIPCDIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGL 60

Query: 239 CCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDR 298
           C      E   LF +M     +PN++TF  +++ LC+ G++ EA  LL+ M++ GL P++
Sbjct: 61  CVEDRVSEALDLFHQMC----KPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQ 116

Query: 299 FTYNSLMDGYCLV------------------------------------GRIDTAREIFL 322
            TY +++DG C +                                    GR   A+ +F+
Sbjct: 117 ITYGTIVDGMCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFI 176

Query: 323 SMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAG 382
            M  KG    +V+Y+ +ING+C      EA  L ++++   +   V+T++ L++ L + G
Sbjct: 177 EMQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEG 236

Query: 383 QAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLE-----------M 431
               AQ L  EM    V P++ T N L+DGLC +  +++A+++F  ++            
Sbjct: 237 DLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAF 296

Query: 432 NKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEK 491
           N  E  ++ +N LI GL   G+   A EL+ ++P +G+VP  VTYS MI+GLC++ +L++
Sbjct: 297 NGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDE 356

Query: 492 ANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTF 548
           A      M     +PN+VTFNTL+ G+ +       +EL  +M    R +V +  T+
Sbjct: 357 ATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMG--RRGIVANAITY 411



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 121/417 (29%), Positives = 203/417 (48%), Gaps = 42/417 (10%)

Query: 43  EFLHENCKSGIINLN-------------EARYFFGYMTHMQPSPPISSFNLLFGAVAKNR 89
           +  H+ CK  ++                EA      M      P   ++  +   + K  
Sbjct: 71  DLFHQMCKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMG 130

Query: 90  HYDAVISFYRKLVSIG-LLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGV 148
              + ++  RK+  +  + PD +  + +I+       GL  + R  +A  LF  M   G+
Sbjct: 131 DTVSALNLLRKMEELSHIKPDVVIYSAIID-------GLWKDGRHTDAQNLFIEMQDKGI 183

Query: 149 RPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKT--NIFSYSIIIDSLCKE 206
            PD++TY  +INGFC +G  S A RL ++M        L+ K   ++ ++S +I++L KE
Sbjct: 184 FPDIVTYSCMINGFCSSGKWSEAQRLLQEM--------LVRKISPDVVTFSGLINALVKE 235

Query: 207 GLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI----EMLDL----- 257
           G ++ A++L  EM   G+ P VV C TL+ G C +G  ++   +F      M+D+     
Sbjct: 236 GDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHA 295

Query: 258 --GPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRID 315
             G  P++ T+N++I  L   GK  EA  L E M  RG+ PD  TY+S+++G C   R+D
Sbjct: 296 FNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLD 355

Query: 316 TAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLL 375
            A ++F SM SK     +V++N LI GYCK   V++ + L+ ++   G+    ITY TL+
Sbjct: 356 EATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLI 415

Query: 376 SGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMN 432
            G  + G    +  +F EM    V PD  T   ++ GL     ++ A+ +   L+M+
Sbjct: 416 RGFRKVGNINGSLDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRALAMLEELQMS 472



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 101/357 (28%), Positives = 185/357 (51%), Gaps = 16/357 (4%)

Query: 262 NLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIF 321
           ++ +FN++I C C   K+  A      + + G +P   T+N+L+ G C+  R+  A ++F
Sbjct: 14  DIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLF 73

Query: 322 LSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQA 381
             M    CK  VV++  L+NG C+   V EA++L  +++ +G++   ITY T++ G+ + 
Sbjct: 74  HQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKM 129

Query: 382 GQAGYAQKLFDEM-KLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEI 440
           G    A  L  +M +L +++PD+  Y+ +IDGL K+    +A  LF  ++       I  
Sbjct: 130 GDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVT 189

Query: 441 FNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYME 500
           ++C+I+G C +G+   A  L  ++  + + P VVT+S +I+ L ++G L  A D L  M 
Sbjct: 190 YSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMI 249

Query: 501 KNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNL---------VPDDTTFSIV 551
            +G  PNVVT NTL+ G   + K    +E+   M +   ++          PD  T++I+
Sbjct: 250 SSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNIL 309

Query: 552 VDLLAKDEKYHECSAV-SKSSYRACLYVTIFQPSSLGSMIGCTVRLMPQPEMSDTLG 607
           +  L  + K+ E   +  +  +R  +  T+   S +  +   + RL    +M D++G
Sbjct: 310 ISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQS-RLDEATQMFDSMG 365


>gi|242033891|ref|XP_002464340.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
 gi|241918194|gb|EER91338.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
          Length = 758

 Score =  256 bits (653), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 146/457 (31%), Positives = 240/457 (52%), Gaps = 13/457 (2%)

Query: 78  FNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEAT 137
           FN L   + +      + S Y ++   G+ PD +TLN LI       + LC  ++++ A 
Sbjct: 165 FNHLLNVLVEGSKLKLLESVYNEMTGRGIQPDVVTLNTLI-------KALCRAHQVRTAV 217

Query: 138 WLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYS 197
            + + M + GV PD  T+ TL+ GF   G++  ALR+  KM+         S T + + +
Sbjct: 218 LMLEEMSSHGVAPDETTFTTLMQGFIEEGSIEAALRVKAKMMEAG-----CSPTGV-TVN 271

Query: 198 IIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDL 257
           ++I+  CK G V+ A     +    G  P  V   T +HG C  G+      +   ML  
Sbjct: 272 VLINGYCKMGRVEDALGYIQQEIADGFEPDQVTYNTFVHGLCQNGHVSHALKVMDLMLQE 331

Query: 258 GPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTA 317
           G  P++ T+N +I+CL K G+++EA G++  M+ RG  PD  T+N+L+       R++ A
Sbjct: 332 GHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQNRLEEA 391

Query: 318 REIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSG 377
            ++   +  KG    V ++NILIN  CK+ +    + L+ ++ S+G     +TYN L+  
Sbjct: 392 LDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNILIDH 451

Query: 378 LFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFG 437
           L   G+ G A  L +EM+         TYN +ID LCK   ++EA ++F  ++       
Sbjct: 452 LCSMGKLGNALDLLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQGISRS 511

Query: 438 IEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLL 497
              FN LIDGLCKA R+D+A EL  ++ ++GL P  +TY+ ++   C++G ++KA D L 
Sbjct: 512 AVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPNNITYNSILTHYCKQGNIKKAADILE 571

Query: 498 YMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKM 534
            M  NG   +VVT+ TL++G  +  +T   ++LL  M
Sbjct: 572 TMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGM 608



 Score =  245 bits (626), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 151/517 (29%), Positives = 258/517 (49%), Gaps = 30/517 (5%)

Query: 72  SPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVEN 131
           +P  ++F  L     +    +A +    K++  G  P  +T+N+LIN       G C   
Sbjct: 229 APDETTFTTLMQGFIEEGSIEAALRVKAKMMEAGCSPTGVTVNVLIN-------GYCKMG 281

Query: 132 RIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKT 191
           R+++A    +  IA G  PD +TY T ++G C+ G++S AL++   M+   ++       
Sbjct: 282 RVEDALGYIQQEIADGFEPDQVTYNTFVHGLCQNGHVSHALKVMDLMLQEGHD------P 335

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
           ++F+Y+ +I+ L K G +D+AK +  +M  RG  P      TLI         EE   L 
Sbjct: 336 DVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQNRLEEALDLA 395

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
            E+   G  P++ TFN++I+ LCK G  +    L E M   G  PD  TYN L+D  C +
Sbjct: 396 RELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNILIDHLCSM 455

Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
           G++  A ++   M S GC  + V+YN +I+  CK + +EEA  ++ Q+ + G+ ++ +T+
Sbjct: 456 GKLGNALDLLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQGISRSAVTF 515

Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
           NTL+ GL +A +   A +L ++M    ++P+  TYN ++   CK   +++A  +   +  
Sbjct: 516 NTLIDGLCKAKRIDDATELIEQMVKEGLQPNNITYNSILTHYCKQGNIKKAADILETMTA 575

Query: 432 NKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEK 491
           N FE  +  +  LI+GLCKAGR   A +L   +  KG+ PT   Y+ +I  L R+  L  
Sbjct: 576 NGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRD 635

Query: 492 ANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSK-----VVELLHK-----------MA 535
           A +    M + G  P+ +T+  +     +     K     +VE+++K           +A
Sbjct: 636 ALNLFREMTEVGEPPDALTYKIVFRSLCRGGGPIKEAFDFLVEMVNKGFMPEFSSFRMLA 695

Query: 536 EPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKSSY 572
           E   NL  DD   S  ++L+ +  K+ E  A +   Y
Sbjct: 696 EGLLNLGMDDYLIS-AIELIIEKAKFRESDASAIRGY 731



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 112/346 (32%), Positives = 176/346 (50%), Gaps = 4/346 (1%)

Query: 223 GINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEA 282
           G+    VV   L++        + +  ++ EM   G +P+++T N +I  LC+  ++  A
Sbjct: 157 GVQADTVVFNHLLNVLVEGSKLKLLESVYNEMTGRGIQPDVVTLNTLIKALCRAHQVRTA 216

Query: 283 NGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILING 342
             +LE M   G+ PD  T+ +LM G+   G I+ A  +   M   GC  T V+ N+LING
Sbjct: 217 VLMLEEMSSHGVAPDETTFTTLMQGFIEEGSIEAALRVKAKMMEAGCSPTGVTVNVLING 276

Query: 343 YCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPD 402
           YCK+  VE+A+   +Q I++G     +TYNT + GL Q G   +A K+ D M     +PD
Sbjct: 277 YCKMGRVEDALGYIQQEIADGFEPDQVTYNTFVHGLCQNGHVSHALKVMDLMLQEGHDPD 336

Query: 403 LSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFH 462
           + TYN +I+ L KN  + EA  + + +           FN LI  L    RL+ A +L  
Sbjct: 337 VFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQNRLEEALDLAR 396

Query: 463 KLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNN 522
           +L  KGL P V T++I+I+ LC+ G           M+ +GC P+ VT+N L+       
Sbjct: 397 ELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNILIDHLCSMG 456

Query: 523 KTSKVVELLHKMAEPERNLVPDDT-TFSIVVDLLAKDEKYHECSAV 567
           K    ++LL++M   E N  P  T T++ ++D L K  +  E   V
Sbjct: 457 KLGNALDLLNEM---ESNGCPRSTVTYNTIIDALCKKMRIEEAEEV 499



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 79/314 (25%), Positives = 155/314 (49%), Gaps = 7/314 (2%)

Query: 261 PNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREI 320
           P+   +  ++  L   G  +   GL+  M + G         S ++ Y  + R D A ++
Sbjct: 87  PSSAVYEEIVQKLGTAGAFDLMEGLVREMRREGHQVRAVVVRSFVESYARLRRFDDAVDL 146

Query: 321 FLSM---HSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSG 377
            L+     + G +   V +N L+N   +   ++   S+Y ++   G++  V+T NTL+  
Sbjct: 147 VLNQLDNDTFGVQADTVVFNHLLNVLVEGSKLKLLESVYNEMTGRGIQPDVVTLNTLIKA 206

Query: 378 LFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKL-FHMLEMNKFEF 436
           L +A Q   A  + +EM  + V PD +T+  L+ G  +   ++ A+++   M+E      
Sbjct: 207 LCRAHQVRTAVLMLEEMSSHGVAPDETTFTTLMQGFIEEGSIEAALRVKAKMMEAGCSPT 266

Query: 437 GIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFL 496
           G+ + N LI+G CK GR+++A     +    G  P  VTY+  +HGLC+ G +  A   +
Sbjct: 267 GVTV-NVLINGYCKMGRVEDALGYIQQEIADGFEPDQVTYNTFVHGLCQNGHVSHALKVM 325

Query: 497 LYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLA 556
             M + G  P+V T+NT+++   +N +  +   ++++M   +R  +PD TTF+ ++  L+
Sbjct: 326 DLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMV--DRGCLPDTTTFNTLIVALS 383

Query: 557 KDEKYHECSAVSKS 570
              +  E   +++ 
Sbjct: 384 SQNRLEEALDLARE 397


>gi|449524916|ref|XP_004169467.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g74580-like [Cucumis
           sativus]
          Length = 877

 Score =  255 bits (652), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 155/506 (30%), Positives = 259/506 (51%), Gaps = 18/506 (3%)

Query: 41  LNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRK 100
            N+ +H  CK G  N+ E+   F  +      P + +FN+    + +    D        
Sbjct: 219 FNKLIHVLCKKG--NVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLES 276

Query: 101 LVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLIN 160
           +VS GL PD ++ N LI C      G C  +++ EA      M+  GV P+  TY T+IN
Sbjct: 277 IVSEGLTPDVISYNTLI-C------GFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIIN 329

Query: 161 GFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMK 220
           GFC+ G +  A     K++      G I     F+YS +I+ LC +G +++A  +F E  
Sbjct: 330 GFCKAGMMQNA----DKILRDAMFKGFIPDE--FTYSSLINGLCNDGDMNRAMAVFYEAM 383

Query: 221 GRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKIN 280
            +G   ++++  TL+ G    G   +   L  +M++ G  P++ T+N++++ LCK G ++
Sbjct: 384 EKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLS 443

Query: 281 EANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILI 340
           +ANG+L   I +G  PD FT+N+L+DGYC    +D A EI  +M S G    V++YN L+
Sbjct: 444 DANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLL 503

Query: 341 NGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVE 400
           NG CK   ++  +  ++ ++  G    +ITYN L+    +  +   A +LF EMK   + 
Sbjct: 504 NGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLT 563

Query: 401 PDLSTYNILIDGLCKNNCVQEAVKLFHMLEMN-KFEFGIEIFNCLIDGLCKAGRLDNAWE 459
           PD+ T   LI GLC N  + +A +LF  +E   KF +   IFN +I+  C    +  A +
Sbjct: 564 PDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCXKLNVSMAEK 623

Query: 460 LFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFL 519
           LFHK+      P   TY +MI   C+ G ++ A+ FLL     G  P+  T   +++   
Sbjct: 624 LFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLC 683

Query: 520 QNNKTSKVVELLHKMAEPERNLVPDD 545
             ++ S+ V +++ M   +  +VP++
Sbjct: 684 VTHRLSEAVVIINLMV--QNGIVPEE 707



 Score =  244 bits (623), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 149/526 (28%), Positives = 256/526 (48%), Gaps = 35/526 (6%)

Query: 56  LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNI 115
           + EA   F  M      P + S+N +   + +  ++      Y ++  IG+ PD  T  I
Sbjct: 92  VQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDIGIYPDVYTHTI 151

Query: 116 LINCFGNKER----------------------------GLCVENRIKEATWLFKNMIAFG 147
            +  F    R                            G   EN   EA  LF  M+  G
Sbjct: 152 RMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQG 211

Query: 148 VRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEG 207
           + PD++T+  LI+  C+ GN+  + +L  K++    + G+    N+F+++I I  LC++G
Sbjct: 212 ICPDILTFNKLIHVLCKKGNVQESEKLFSKVM----KRGVCP--NLFTFNIFIQGLCRKG 265

Query: 208 LVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFN 267
            +D+A  L   +   G+ P V+   TLI GFC      E      +M++ G  PN  T+N
Sbjct: 266 AIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYN 325

Query: 268 VMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSK 327
            +I+  CK G +  A+ +L   + +G  PD FTY+SL++G C  G ++ A  +F     K
Sbjct: 326 TIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEK 385

Query: 328 GCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYA 387
           G KH+++ YN L+ G  K   V +A+ L + ++ +G    + TYN +++GL + G    A
Sbjct: 386 GFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDA 445

Query: 388 QKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDG 447
             + ++       PD+ T+N LIDG CK   + +A+++   +  +     +  +N L++G
Sbjct: 446 NGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNG 505

Query: 448 LCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPN 507
           LCKA +LDN  + F  + +KG  P ++TY+I+I   C+  K+ +A +    M+  G  P+
Sbjct: 506 LCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPD 565

Query: 508 VVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
           +VT  TL+ G   N +  K  EL   + E E         F+I+++
Sbjct: 566 IVTLCTLICGLCSNGELDKAYELFVTI-EKEYKFSYSTAIFNIMIN 610



 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 151/485 (31%), Positives = 236/485 (48%), Gaps = 46/485 (9%)

Query: 135 EATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIF 194
           +A  ++  M   G+ PDV T+   +  FC TG  + ALRL   M       G   + N  
Sbjct: 129 QAHKVYMRMKDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNM------PGQGCEFNAV 182

Query: 195 SYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEM 254
           SY  +I    KE    +A  LF EM  +GI P ++    LIH  C  GN +E   LF ++
Sbjct: 183 SYCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKV 242

Query: 255 LDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRI 314
           +  G  PNL TFN+ I  LC+ G I+EA  LLE ++  GL PD  +YN+L+ G+C   ++
Sbjct: 243 MKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKL 302

Query: 315 DTAREIFLSMHSKGCKHTVVSYNILINGYC---------KIL------------------ 347
             A      M + G +    +YN +ING+C         KIL                  
Sbjct: 303 VEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSL 362

Query: 348 --------NVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNV 399
                   ++  AM+++ + +  G + ++I YNTL+ GL + G    A +L  +M  +  
Sbjct: 363 INGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGC 422

Query: 400 EPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWE 459
            PD+ TYN++++GLCK  C+ +A  + +          I  FN LIDG CK   +D A E
Sbjct: 423 SPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIE 482

Query: 460 LFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFL 519
           +   +   G+ P V+TY+ +++GLC+  KL+   D    M + GC PN++T+N L+  F 
Sbjct: 483 ILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFC 542

Query: 520 QNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKD---EKYHECSAVSKSSYRACL 576
           ++ K S+ +EL  +M    R L PD  T   ++  L  +   +K +E     +  Y+   
Sbjct: 543 KDRKVSEAMELFKEM--KTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSY 600

Query: 577 YVTIF 581
              IF
Sbjct: 601 STAIF 605



 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 135/430 (31%), Positives = 221/430 (51%), Gaps = 10/430 (2%)

Query: 132 RIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVS-GDYENGLISK 190
           +++EA  +F+ M  +   P V +Y  ++N     G  S A +++ +M   G Y       
Sbjct: 91  KVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDIGIY------- 143

Query: 191 TNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGL 250
            ++++++I + S C  G    A  L   M G+G     V    +I GF       E   L
Sbjct: 144 PDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEAYHL 203

Query: 251 FIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCL 310
           F EML  G  P++LTFN +I  LCK G + E+  L   +++RG+ P+ FT+N  + G C 
Sbjct: 204 FDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCR 263

Query: 311 VGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVIT 370
            G ID A  +  S+ S+G    V+SYN LI G+CK   + EA     +++++GV     T
Sbjct: 264 KGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFT 323

Query: 371 YNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLE 430
           YNT+++G  +AG    A K+  +       PD  TY+ LI+GLC +  +  A+ +F+   
Sbjct: 324 YNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAM 383

Query: 431 MNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLE 490
              F+  I ++N L+ GL K G +  A +L   + + G  P + TY+++++GLC+ G L 
Sbjct: 384 EKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLS 443

Query: 491 KANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSI 550
            AN  L      GC P++ TFNTL+ G+ +     K +E+L  M      + PD  T++ 
Sbjct: 444 DANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTML--SHGITPDVITYNT 501

Query: 551 VVDLLAKDEK 560
           +++ L K  K
Sbjct: 502 LLNGLCKARK 511



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 57/254 (22%), Positives = 119/254 (46%), Gaps = 3/254 (1%)

Query: 300 TYNSLMDGYCLVGRIDTAREIFLSMHSK-GCKHTVVSYNILINGYCKILNVEEAMSLYRQ 358
           TY  +++   L G+ +   ++   M      K     Y  ++  Y +   V+EA++++ +
Sbjct: 42  TYKCMIEKLGLHGKFEAMEDVLAEMRKNVDSKMLEGVYIGIMRDYGRKGKVQEAVNVFER 101

Query: 359 IISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNC 418
           +       +V +YN +++ L + G    A K++  MK   + PD+ T+ I +   C    
Sbjct: 102 MDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDIGIYPDVYTHTIRMKSFCITGR 161

Query: 419 VQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSI 478
              A++L + +     EF    +  +I G  K      A+ LF ++ ++G+ P ++T++ 
Sbjct: 162 PTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNK 221

Query: 479 MIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPE 538
           +IH LC+KG ++++      + K G  PN+ TFN  + G  +     +   LL  +    
Sbjct: 222 LIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIV--S 279

Query: 539 RNLVPDDTTFSIVV 552
             L PD  +++ ++
Sbjct: 280 EGLTPDVISYNTLI 293


>gi|242084770|ref|XP_002442810.1| hypothetical protein SORBIDRAFT_08g003240 [Sorghum bicolor]
 gi|241943503|gb|EES16648.1| hypothetical protein SORBIDRAFT_08g003240 [Sorghum bicolor]
          Length = 722

 Score =  255 bits (651), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 152/493 (30%), Positives = 243/493 (49%), Gaps = 18/493 (3%)

Query: 63  FGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGN 122
           F  M     +P +   N +   ++    +D + + + +++ +G+ P  +T N L++ F  
Sbjct: 190 FHEMASHGVAPDVKDCNRVLRVLSDAARWDDICAVHAEMLQLGIEPSIVTYNTLLDSF-- 247

Query: 123 KERGLCVENRIKEATWLFKNM--IAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVS 180
                  E R  +   L K M     G  P+ +T+  +I G  R G+L  A     +MV 
Sbjct: 248 -----LKEGRNDKVAMLLKEMETRGSGCLPNDVTHNVVITGLARKGDLEEA----AEMVE 298

Query: 181 GDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCC 240
           G     L  K + F+Y+ +I  L  +G V KA +L LEM+  GI P VV    +IHG   
Sbjct: 299 G---MRLSKKASSFTYNPLITGLLAKGFVKKADDLQLEMENEGIMPTVVTYNAMIHGLLQ 355

Query: 241 AGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFT 300
           +G  E     F+EM  +G +P+++T+N +++  CK G + EA  L   +   GL P   T
Sbjct: 356 SGQVEAAQVKFVEMRAMGLQPDVITYNSLLNGYCKAGSLKEALLLFGDLRHAGLAPTVLT 415

Query: 301 YNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQII 360
           YN L+DGYC +G ++ AR +   M  +GC   V +Y IL+ G     ++  A   + +++
Sbjct: 416 YNILIDGYCRLGDLEEARRLKEEMVEQGCLPDVCTYTILMKGSHNACSLAMAREFFDEML 475

Query: 361 SNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQ 420
           S G++     YNT +      G    A +L + M L  +  D  TYNILIDGLCK   + 
Sbjct: 476 SKGLQPDCFAYNTRIRAELTLGAIAKAFRLREVMMLEGISSDTVTYNILIDGLCKTGNLN 535

Query: 421 EAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMI 480
           +A  L   +  N  +     + CLI   C+ G L  A + F  +   GL P+ VTY++ I
Sbjct: 536 DAKDLQMKMVHNGLQPDCITYTCLIHAHCERGLLREARKFFKDMISDGLAPSAVTYTVFI 595

Query: 481 HGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERN 540
           H  CR+G L  A  +   M + G  PN +T+N L+H   +  +T       H+M   ER 
Sbjct: 596 HAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRTGRTQLAYRHFHEML--ERG 653

Query: 541 LVPDDTTFSIVVD 553
           LVP+  T+++++D
Sbjct: 654 LVPNKYTYTLLID 666



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 109/345 (31%), Positives = 176/345 (51%), Gaps = 7/345 (2%)

Query: 216 FLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCK 275
           F EM   G+ P V  C  ++     A  W+++  +  EML LG  P+++T+N ++D   K
Sbjct: 190 FHEMASHGVAPDVKDCNRVLRVLSDAARWDDICAVHAEMLQLGIEPSIVTYNTLLDSFLK 249

Query: 276 GGKINEANGLLELMIQRGLN--PDRFTYNSLMDGYCLVGRIDTAREIFLSMH-SKGCKHT 332
            G+ ++   LL+ M  RG    P+  T+N ++ G    G ++ A E+   M  SK  K +
Sbjct: 250 EGRNDKVAMLLKEMETRGSGCLPNDVTHNVVITGLARKGDLEEAAEMVEGMRLSK--KAS 307

Query: 333 VVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFD 392
             +YN LI G      V++A  L  ++ + G+  TV+TYN ++ GL Q+GQ   AQ  F 
Sbjct: 308 SFTYNPLITGLLAKGFVKKADDLQLEMENEGIMPTVVTYNAMIHGLLQSGQVEAAQVKFV 367

Query: 393 EMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAG 452
           EM+   ++PD+ TYN L++G CK   ++EA+ LF  L        +  +N LIDG C+ G
Sbjct: 368 EMRAMGLQPDVITYNSLLNGYCKAGSLKEALLLFGDLRHAGLAPTVLTYNILIDGYCRLG 427

Query: 453 RLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFN 512
            L+ A  L  ++ ++G +P V TY+I++ G      L  A +F   M   G  P+   +N
Sbjct: 428 DLEEARRLKEEMVEQGCLPDVCTYTILMKGSHNACSLAMAREFFDEMLSKGLQPDCFAYN 487

Query: 513 TLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAK 557
           T +   L     +K   L   M      +  D  T++I++D L K
Sbjct: 488 TRIRAELTLGAIAKAFRLREVMM--LEGISSDTVTYNILIDGLCK 530



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 106/346 (30%), Positives = 163/346 (47%), Gaps = 16/346 (4%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
           N  L+  CK+G  +L EA   FG + H   +P + ++N+L     +    +       ++
Sbjct: 382 NSLLNGYCKAG--SLKEALLLFGDLRHAGLAPTVLTYNILIDGYCRLGDLEEARRLKEEM 439

Query: 102 VSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLING 161
           V  G LPD  T  IL+    N     C    +  A   F  M++ G++PD   Y T I  
Sbjct: 440 VEQGCLPDVCTYTILMKGSHNA----C---SLAMAREFFDEMLSKGLQPDCFAYNTRIRA 492

Query: 162 FCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKG 221
               G ++ A RL + M+      G+ S T   +Y+I+ID LCK G ++ AK+L ++M  
Sbjct: 493 ELTLGAIAKAFRLREVMML----EGISSDT--VTYNILIDGLCKTGNLNDAKDLQMKMVH 546

Query: 222 RGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINE 281
            G+ P  +  T LIH  C  G   E    F +M+  G  P+ +T+ V I   C+ G +  
Sbjct: 547 NGLQPDCITYTCLIHAHCERGLLREARKFFKDMISDGLAPSAVTYTVFIHAYCRRGNLYS 606

Query: 282 ANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILIN 341
           A G    M++ G+ P+  TYN L+   C  GR   A   F  M  +G      +Y +LI+
Sbjct: 607 AYGWFRKMLEEGVEPNEITYNVLIHALCRTGRTQLAYRHFHEMLERGLVPNKYTYTLLID 666

Query: 342 GYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYA 387
           G CK  N E+AM  Y ++  NG+    +T+  L  G F  G   +A
Sbjct: 667 GNCKEGNWEDAMRFYFEMHQNGIHPDYLTHKALFKG-FDEGHMNHA 711



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 60/238 (25%), Positives = 107/238 (44%), Gaps = 40/238 (16%)

Query: 353 MSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILID- 411
           +S + ++ S+GV   V   N +L  L  A +      +  EM    +EP + TYN L+D 
Sbjct: 187 LSAFHEMASHGVAPDVKDCNRVLRVLSDAARWDDICAVHAEMLQLGIEPSIVTYNTLLDS 246

Query: 412 ------------------------------------GLCKNNCVQEAVKLFHMLEMNKFE 435
                                               GL +   ++EA ++   + ++K  
Sbjct: 247 FLKEGRNDKVAMLLKEMETRGSGCLPNDVTHNVVITGLARKGDLEEAAEMVEGMRLSKKA 306

Query: 436 FGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDF 495
                +N LI GL   G +  A +L  ++  +G++PTVVTY+ MIHGL + G++E A   
Sbjct: 307 SSF-TYNPLITGLLAKGFVKKADDLQLEMENEGIMPTVVTYNAMIHGLLQSGQVEAAQVK 365

Query: 496 LLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
            + M   G  P+V+T+N+L++G+ +     + + L   +      L P   T++I++D
Sbjct: 366 FVEMRAMGLQPDVITYNSLLNGYCKAGSLKEALLLFGDLRHA--GLAPTVLTYNILID 421



 Score = 50.1 bits (118), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 28/105 (26%), Positives = 51/105 (48%)

Query: 461 FHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQ 520
           FH++   G+ P V   + ++  L    + +        M + G  P++VT+NTL+  FL+
Sbjct: 190 FHEMASHGVAPDVKDCNRVLRVLSDAARWDDICAVHAEMLQLGIEPSIVTYNTLLDSFLK 249

Query: 521 NNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECS 565
             +  KV  LL +M       +P+D T ++V+  LA+     E +
Sbjct: 250 EGRNDKVAMLLKEMETRGSGCLPNDVTHNVVITGLARKGDLEEAA 294



 Score = 50.1 bits (118), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 29/121 (23%), Positives = 58/121 (47%), Gaps = 2/121 (1%)

Query: 416 NNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVT 475
           + C    +  FH +  +     ++  N ++  L  A R D+   +  ++ Q G+ P++VT
Sbjct: 180 DTCSTLCLSAFHEMASHGVAPDVKDCNRVLRVLSDAARWDDICAVHAEMLQLGIEPSIVT 239

Query: 476 YSIMIHGLCRKGKLEKANDFLLYMEK--NGCAPNVVTFNTLMHGFLQNNKTSKVVELLHK 533
           Y+ ++    ++G+ +K    L  ME   +GC PN VT N ++ G  +     +  E++  
Sbjct: 240 YNTLLDSFLKEGRNDKVAMLLKEMETRGSGCLPNDVTHNVVITGLARKGDLEEAAEMVEG 299

Query: 534 M 534
           M
Sbjct: 300 M 300


>gi|302792252|ref|XP_002977892.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
 gi|300154595|gb|EFJ21230.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
          Length = 500

 Score =  254 bits (650), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 161/488 (32%), Positives = 258/488 (52%), Gaps = 26/488 (5%)

Query: 53  IINLNEARYFFGYMTHMQPSPPISSFNLLFGAV-AKNRHYDAVISFYRKLVSIGLLPDFL 111
           +  L +A  F G M      P + ++  +  A+  +NR ++A   F  ++ +  L P+ +
Sbjct: 24  VKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEAR-KFLEEMANRNLTPNVV 82

Query: 112 TLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVA 171
           T  +LI+       GLC   R+ EA  L   M    V P  +TY +LI+G C+    S A
Sbjct: 83  TYTVLID-------GLCKGGRVDEAVALLSKMRKKCV-PTAVTYNSLISGLCKAERASEA 134

Query: 172 LRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVC 231
             L ++MV     +G I   +IF+Y+ +I   CK    D A  +F ++  RG  P VV  
Sbjct: 135 YDLLEEMVY----SGCIP--DIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTY 188

Query: 232 TTLIHGFCCAGNWEEVNGLFIEMLDLGP-RPNLLTFNVMIDCLCKGGKINEANGLLELMI 290
           + LI G C  G  +E   LF  M+  G   PN +T+N +I   C+ GK++EA  LLE M 
Sbjct: 189 SCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMA 248

Query: 291 QRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVE 350
           + G +PD  TY +LM+G+C + R+D A ++   M  KG    VV++  L++G C+   + 
Sbjct: 249 ETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLS 308

Query: 351 EAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQK-LFDEMKLYNVEPDLSTYNIL 409
           +A+ +  ++       TV TYNT+L G  +A Q   A+K + +EM   +  P++ ++NI+
Sbjct: 309 DAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLEEM---DCPPNVVSFNIM 365

Query: 410 IDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHK-LPQKG 468
           I GLCK N   EA++L       +    + ++  +IDGLC+  ++D A  ++ K L + G
Sbjct: 366 IRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPG 425

Query: 469 LVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVV 528
            +P  +TYS +I GLC  G L++A     Y+EK GC PN+ T+N L+  F + N+     
Sbjct: 426 CLPNSITYSTLITGLCNAGMLDRARG---YIEK-GCVPNIGTYNLLIDAFRKANRDEDAR 481

Query: 529 ELLHKMAE 536
           ELL  M +
Sbjct: 482 ELLDDMVQ 489



 Score =  244 bits (624), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 139/420 (33%), Positives = 227/420 (54%), Gaps = 12/420 (2%)

Query: 151 DVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVD 210
           D +TY +LI G C+   L  AL    KMVS  +        ++++Y+ +I +LC E  + 
Sbjct: 10  DFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFH------PDVYTYTAVIHALCVENRLH 63

Query: 211 KAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMI 270
           +A++   EM  R + P VV  T LI G C  G  +E   L  +M      P  +T+N +I
Sbjct: 64  EARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCV-PTAVTYNSLI 122

Query: 271 DCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCK 330
             LCK  + +EA  LLE M+  G  PD FTY +L+ G+C   + D A  +F  + ++G +
Sbjct: 123 SGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFR 182

Query: 331 HTVVSYNILINGYCKILNVEEAMSLYRQIISNG-VRQTVITYNTLLSGLFQAGQAGYAQK 389
             VV+Y+ LI+G CK   ++EA+ L+ ++I +G      +TYN+L+SG  + G+   A  
Sbjct: 183 PDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMN 242

Query: 390 LFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLC 449
           L + M      PD+ TY  L++G CK   + +A  L + +        +  F  L+DGLC
Sbjct: 243 LLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLC 302

Query: 450 KAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVV 509
           +  RL +A  +  ++ +K   PTV TY+ ++ G CR  +LE+A  F+L  E+  C PNVV
Sbjct: 303 RENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFML--EEMDCPPNVV 360

Query: 510 TFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSK 569
           +FN ++ G  + N++S+ +EL+ +     R   PD   ++ V+D L +++K  E   V +
Sbjct: 361 SFNIMIRGLCKVNRSSEAMELVEEAR--RRRCNPDVVMYTTVIDGLCREKKVDEACRVYR 418



 Score =  235 bits (600), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 143/450 (31%), Positives = 230/450 (51%), Gaps = 22/450 (4%)

Query: 56  LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNI 115
           L+EAR F   M +   +P + ++ +L   + K    D  ++   K+     +P  +T N 
Sbjct: 62  LHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRK-KCVPTAVTYNS 120

Query: 116 LINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLH 175
           LI+       GLC   R  EA  L + M+  G  PD+ TY TLI GFC++     ALR+ 
Sbjct: 121 LIS-------GLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVF 173

Query: 176 KKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEM-KGRGINPAVVVCTTL 234
           +++V+  +      + ++ +YS +ID LCKEG + +A +LF  M K     P  V   +L
Sbjct: 174 EQLVARGF------RPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSL 227

Query: 235 IHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGL 294
           I GFC  G  +E   L   M + G  P+++T+  +++  CK  ++++A  LL  M ++GL
Sbjct: 228 ISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGL 287

Query: 295 NPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMS 354
            PD  T+ SLMDG C   R+  A  I   M  K C  TV +YN +++GYC+   +EEA  
Sbjct: 288 TPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARK 347

Query: 355 LYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLC 414
              + +       V+++N ++ GL +  ++  A +L +E +     PD+  Y  +IDGLC
Sbjct: 348 FMLEEMD--CPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLC 405

Query: 415 KNNCVQEAVKLFH-MLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTV 473
           +   V EA +++  MLE          ++ LI GLC AG LD A        +KG VP +
Sbjct: 406 REKKVDEACRVYRKMLEEPGCLPNSITYSTLITGLCNAGMLDRARGYI----EKGCVPNI 461

Query: 474 VTYSIMIHGLCRKGKLEKANDFLLYMEKNG 503
            TY+++I    +  + E A + L  M + G
Sbjct: 462 GTYNLLIDAFRKANRDEDARELLDDMVQRG 491



 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 125/398 (31%), Positives = 209/398 (52%), Gaps = 12/398 (3%)

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
           +  +Y+ +I  LCK   +++A     +M  +G +P V   T +IH  C      E     
Sbjct: 10  DFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFL 69

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
            EM +    PN++T+ V+ID LCKGG+++EA  LL  M ++ + P   TYNSL+ G C  
Sbjct: 70  EEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCV-PTAVTYNSLISGLCKA 128

Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
            R   A ++   M   GC   + +Y  LI G+CK    ++A+ ++ Q+++ G R  V+TY
Sbjct: 129 ERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTY 188

Query: 372 NTLLSGLFQAGQAGYAQKLFDEM-KLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLE 430
           + L+ GL + G+   A  LF  M K  +  P+  TYN LI G C+   + EA+ L   + 
Sbjct: 189 SCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMA 248

Query: 431 MNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLE 490
                  +  +  L++G CK  RLD+A++L +++ +KGL P VVT++ ++ GLCR+ +L 
Sbjct: 249 ETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLS 308

Query: 491 KANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSI 550
            A   L  M +  C+P V T+NT++ G+ + N+    +E   K    E +  P+  +F+I
Sbjct: 309 DAVHILGEMRRKSCSPTVYTYNTILDGYCRANQ----LEEARKFMLEEMDCPPNVVSFNI 364

Query: 551 VVDLLAKDEKYHEC-SAVSKSSYRAC-----LYVTIFQ 582
           ++  L K  +  E    V ++  R C     +Y T+  
Sbjct: 365 MIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVID 402



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 86/268 (32%), Positives = 131/268 (48%), Gaps = 39/268 (14%)

Query: 326 SKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAG 385
           +  C    V+Y  LI G CK+  +E+A+    +++S G    V TY  ++  L    +  
Sbjct: 4   TNSCSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLH 63

Query: 386 YAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLI 445
            A+K  +EM   N+ P++ TY +LIDGLCK   V EAV L   +        +  +N LI
Sbjct: 64  EARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCVPTAV-TYNSLI 122

Query: 446 DGLCKAGRLDNAWEL-----------------------------------FHKLPQKGLV 470
            GLCKA R   A++L                                   F +L  +G  
Sbjct: 123 SGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFR 182

Query: 471 PTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNG-CAPNVVTFNTLMHGFLQNNKTSKVVE 529
           P VVTYS +I GLC++G+L++A D    M K+G C PN VT+N+L+ GF +  K  + + 
Sbjct: 183 PDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMN 242

Query: 530 LLHKMAEPERNLVPDDTTFSIVVDLLAK 557
           LL +MAE   +  PD  T++ +++   K
Sbjct: 243 LLERMAETGSS--PDVVTYTTLMNGFCK 268



 Score =  118 bits (296), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 65/205 (31%), Positives = 104/205 (50%), Gaps = 3/205 (1%)

Query: 359 IISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNC 418
           + +N      +TY +L+ GL +  +   A     +M      PD+ TY  +I  LC  N 
Sbjct: 2   VATNSCSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENR 61

Query: 419 VQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSI 478
           + EA K    +        +  +  LIDGLCK GR+D A  L  K+ +K  VPT VTY+ 
Sbjct: 62  LHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKM-RKKCVPTAVTYNS 120

Query: 479 MIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPE 538
           +I GLC+  +  +A D L  M  +GC P++ T+ TL+ GF ++ K+   + +  ++    
Sbjct: 121 LISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLV--A 178

Query: 539 RNLVPDDTTFSIVVDLLAKDEKYHE 563
           R   PD  T+S ++D L K+ +  E
Sbjct: 179 RGFRPDVVTYSCLIDGLCKEGRLKE 203



 Score = 82.0 bits (201), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 46/136 (33%), Positives = 66/136 (48%), Gaps = 3/136 (2%)

Query: 428 MLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKG 487
           M+  N        +  LI GLCK  RL+ A     K+  KG  P V TY+ +IH LC + 
Sbjct: 1   MVATNSCSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVEN 60

Query: 488 KLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTT 547
           +L +A  FL  M      PNVVT+  L+ G  +  +  + V LL KM    +  VP   T
Sbjct: 61  RLHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKM---RKKCVPTAVT 117

Query: 548 FSIVVDLLAKDEKYHE 563
           ++ ++  L K E+  E
Sbjct: 118 YNSLISGLCKAERASE 133


>gi|296085490|emb|CBI29222.3| unnamed protein product [Vitis vinifera]
          Length = 826

 Score =  254 bits (650), Expect = 8e-65,   Method: Compositional matrix adjust.
 Identities = 164/521 (31%), Positives = 263/521 (50%), Gaps = 25/521 (4%)

Query: 39  TQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFY 98
           T +N F    CK G   + +A   F  M  +  SP + ++N L   + K+ + D    F 
Sbjct: 251 TAINAF----CKGG--KVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFK 304

Query: 99  RKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTL 158
            K+V  G+    +T ++LIN       GL    +  EA  + K  +  G  P+ + Y TL
Sbjct: 305 EKMVKDGVNATLITYSVLIN-------GLMKLEKFNEANSVLKETLEKGFTPNEVVYNTL 357

Query: 159 INGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLE 218
           I+G+C+ GNL  ALR+   MVS     G+    N  + + II   CK G +++A+ +  E
Sbjct: 358 IDGYCKMGNLGDALRIRGDMVS----KGI--NPNSVTLNSIIQGFCKIGQMEQAECILEE 411

Query: 219 MKGRG--INPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKG 276
           M  RG  INP     TT+IH  C    +E       EML    RPN      ++  LCK 
Sbjct: 412 MLSRGFSINPGAF--TTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKE 469

Query: 277 GKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSY 336
           GK ++A  L   ++++G   +  T N+L+ G C  G +  A  +   M  +G     ++Y
Sbjct: 470 GKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITY 529

Query: 337 NILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKL 396
           N LI+G CK   VEE   L  +++  G+     TYN L+ G+ + G+   A  L++E K 
Sbjct: 530 NTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKS 589

Query: 397 YNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDN 456
            ++ P++ TY ++IDG CK + ++E  KLF  L     E    ++N LI   C+ G    
Sbjct: 590 RDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVE 649

Query: 457 AWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMH 516
           A++L   +  KG+ PT  TYS +IHG+C  G++E A   +  M K G  PNVV +  L+ 
Sbjct: 650 AFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIG 709

Query: 517 GFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAK 557
           G+ +  +  KVV +L +M+    ++ P+  T+++++D  +K
Sbjct: 710 GYCKLGQMDKVVNVLQEMS--SYDIHPNKITYTVMIDGYSK 748



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 144/549 (26%), Positives = 258/549 (46%), Gaps = 40/549 (7%)

Query: 33  AVSSPETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYD 92
            VS      N  +H  CK G  NL+EA  F   M     +  + ++++L   + K   ++
Sbjct: 276 GVSPNVVTYNNLIHGLCKHG--NLDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFN 333

Query: 93  AVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDV 152
              S  ++ +  G  P+ +  N LI+       G C    + +A  +  +M++ G+ P+ 
Sbjct: 334 EANSVLKETLEKGFTPNEVVYNTLID-------GYCKMGNLGDALRIRGDMVSKGINPNS 386

Query: 153 ITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSY---------------- 196
           +T  ++I GFC+ G +  A  + ++M+S  +     + T I  +                
Sbjct: 387 VTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLRE 446

Query: 197 -------------SIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGN 243
                        + ++  LCKEG    A EL+  +  +G    +V    LIHG C  GN
Sbjct: 447 MLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGN 506

Query: 244 WEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNS 303
            +E   L  +ML+ G   + +T+N +I   CK GK+ E   L   M+++G+ PD FTYN 
Sbjct: 507 MQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNL 566

Query: 304 LMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNG 363
           L+ G C +G++D A  ++    S+     V +Y ++I+GYCK   +EE   L+ ++++  
Sbjct: 567 LIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQN 626

Query: 364 VRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAV 423
           +    + YNTL+    + G    A KL D+M+   + P  +TY+ LI G+C    +++A 
Sbjct: 627 LELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAK 686

Query: 424 KLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGL 483
            L   +        +  +  LI G CK G++D    +  ++    + P  +TY++MI G 
Sbjct: 687 CLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGY 746

Query: 484 CRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVP 543
            + G ++ A   L  M   G  P+ VT+N L +GF +  K  +  ++   M+  +  L  
Sbjct: 747 SKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEEGFKICDYMS--QEGLPL 804

Query: 544 DDTTFSIVV 552
           D+ T++ +V
Sbjct: 805 DEITYTTLV 813



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 148/485 (30%), Positives = 244/485 (50%), Gaps = 16/485 (3%)

Query: 80  LLFGAVAKNRHYDAVISFYRKLVSIGLLP-DFLTLNILINCFGNKERGLCVENRIKEATW 138
           +LFG   KNRH + + S    L  +G        +++LI+ +  + R +   N    A  
Sbjct: 145 VLFGD-PKNRHIE-IASAMADLNEVGESGVAVAAVDLLIHVYCTQFRNVGFRN----AIG 198

Query: 139 LFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSI 198
           +F+ +   GV P V T   L++   +   L  +  + + M  G          +++ +S 
Sbjct: 199 VFRFLANKGVFPTVKTCTFLLSSLVKANELEKSYWVFETMRQG-------VSPDVYLFST 251

Query: 199 IIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLG 258
            I++ CK G V+ A +LF +M+  G++P VV    LIHG C  GN +E      +M+  G
Sbjct: 252 AINAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDG 311

Query: 259 PRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAR 318
               L+T++V+I+ L K  K NEAN +L+  +++G  P+   YN+L+DGYC +G +  A 
Sbjct: 312 VNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDAL 371

Query: 319 EIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGL 378
            I   M SKG     V+ N +I G+CKI  +E+A  +  +++S G       + T++  L
Sbjct: 372 RIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWL 431

Query: 379 FQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGI 438
               +   A +   EM L N+ P+      L+ GLCK     +AV+L+  L    F   +
Sbjct: 432 CMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANL 491

Query: 439 EIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLY 498
              N LI GLCK G +  A  L  K+ ++G V   +TY+ +I G C++GK+E+       
Sbjct: 492 VTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGE 551

Query: 499 MEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKD 558
           M K G  P+  T+N L+HG  +  K  + V L ++     R+LVP+  T+ +++D   K 
Sbjct: 552 MVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECK--SRDLVPNVYTYGVMIDGYCKA 609

Query: 559 EKYHE 563
           +K  E
Sbjct: 610 DKIEE 614



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 118/391 (30%), Positives = 195/391 (49%), Gaps = 15/391 (3%)

Query: 66  MTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKER 125
           + +M+P+  + +  L+ G   + +H DAV  ++R L+  G   + +T N LI+       
Sbjct: 449 LRNMRPNDGLLT-TLVGGLCKEGKHSDAVELWFR-LLEKGFGANLVTTNALIH------- 499

Query: 126 GLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYEN 185
           GLC    ++EA  L K M+  G   D ITY TLI+G C+ G +    +L  +MV    E 
Sbjct: 500 GLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIE- 558

Query: 186 GLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWE 245
                 + F+Y+++I  +C+ G +D+A  L+ E K R + P V     +I G+C A   E
Sbjct: 559 -----PDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIE 613

Query: 246 EVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLM 305
           E   LF E+L      N + +N +I   C+ G   EA  L + M  +G+ P   TY+SL+
Sbjct: 614 EGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLI 673

Query: 306 DGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVR 365
            G C +GR++ A+ +   M  +G    VV Y  LI GYCK+  +++ +++ +++ S  + 
Sbjct: 674 HGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIH 733

Query: 366 QTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKL 425
              ITY  ++ G  ++G    A KL  EM    + PD  TYN+L +G CK   ++E  K+
Sbjct: 734 PNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEEGFKI 793

Query: 426 FHMLEMNKFEFGIEIFNCLIDGLCKAGRLDN 456
              +           +  L+ G  +   L N
Sbjct: 794 CDYMSQEGLPLDEITYTTLVHGWQQPSALTN 824



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 49/172 (28%), Positives = 87/172 (50%), Gaps = 6/172 (3%)

Query: 403 LSTYNILIDGLC---KNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWE 459
           ++  ++LI   C   +N   + A+ +F  L        ++    L+  L KA  L+ ++ 
Sbjct: 174 VAAVDLLIHVYCTQFRNVGFRNAIGVFRFLANKGVFPTVKTCTFLLSSLVKANELEKSYW 233

Query: 460 LFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFL 519
           +F  + Q G+ P V  +S  I+  C+ GK+E A      MEK G +PNVVT+N L+HG  
Sbjct: 234 VFETMRQ-GVSPDVYLFSTAINAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLC 292

Query: 520 QNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKSS 571
           ++    +      KM +   N      T+S++++ L K EK++E ++V K +
Sbjct: 293 KHGNLDEAFRFKEKMVKDGVNATL--ITYSVLINGLMKLEKFNEANSVLKET 342


>gi|302795346|ref|XP_002979436.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
 gi|300152684|gb|EFJ19325.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
          Length = 500

 Score =  254 bits (649), Expect = 9e-65,   Method: Compositional matrix adjust.
 Identities = 160/488 (32%), Positives = 258/488 (52%), Gaps = 26/488 (5%)

Query: 53  IINLNEARYFFGYMTHMQPSPPISSFNLLFGAV-AKNRHYDAVISFYRKLVSIGLLPDFL 111
           +  L +A  F G M      P + ++  +  A+  +NR ++A   F  ++ +  L P+ +
Sbjct: 24  VKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEAR-KFLEEMANRNLTPNVV 82

Query: 112 TLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVA 171
           T  +LI+       GLC   R+ EA  L   M    V P  +TY +LI+G C+    S A
Sbjct: 83  TYTVLID-------GLCKGGRVDEAVALLSKMRKKCV-PTAVTYNSLISGLCKAERASEA 134

Query: 172 LRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVC 231
             L ++MV     +G I   +IF+Y+ +I   CK    D A  +F ++  RG  P VV  
Sbjct: 135 YDLLEEMVY----SGCIP--DIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTY 188

Query: 232 TTLIHGFCCAGNWEEVNGLFIEMLDLGP-RPNLLTFNVMIDCLCKGGKINEANGLLELMI 290
           + LI G C  G  +E   LF  M+  G   PN +T+N +I   C+ GK++EA  LLE M 
Sbjct: 189 SCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMA 248

Query: 291 QRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVE 350
           + G +PD  TY +LM+G+C + R+D A ++   M  KG    VV++  L++G C+   + 
Sbjct: 249 ETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLS 308

Query: 351 EAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQK-LFDEMKLYNVEPDLSTYNIL 409
           +A+ +  ++       TV TYNT+L G  +A Q   A+K + +EM   +  P++ ++NI+
Sbjct: 309 DAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLEEM---DCPPNVVSFNIM 365

Query: 410 IDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHK-LPQKG 468
           I GLCK N   EA++L       +    + ++  +IDGLC+  ++D A  ++ K L + G
Sbjct: 366 IRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPG 425

Query: 469 LVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVV 528
            +P  +TYS ++ GLC  G L++A     Y+EK GC PN+ T+N L+  F + N+     
Sbjct: 426 CLPNSITYSTLVTGLCNAGMLDRARG---YIEK-GCVPNIGTYNLLIDAFRKANRDEDAR 481

Query: 529 ELLHKMAE 536
           ELL  M +
Sbjct: 482 ELLDDMVQ 489



 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 137/445 (30%), Positives = 232/445 (52%), Gaps = 18/445 (4%)

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           DF+T   LI       +GLC   R+++A      M++ G  PDV TY  +I+  C    L
Sbjct: 10  DFVTYTSLI-------QGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRL 62

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
             A +  ++M + +         N+ +Y+++ID LCK G VD+A  L  +M+ + + P  
Sbjct: 63  HEARKFLEEMANRNL------TPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCV-PTA 115

Query: 229 VVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLEL 288
           V   +LI G C A    E   L  EM+  G  P++ T+  +I   CK  K ++A  + E 
Sbjct: 116 VTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQ 175

Query: 289 MIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKG-CKHTVVSYNILINGYCKIL 347
           ++ RG  PD  TY+ L+DG C  GR+  A ++F  M   G C    V+YN LI+G+C++ 
Sbjct: 176 LVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMG 235

Query: 348 NVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYN 407
            ++EAM+L  ++   G    V+TY TL++G  +  +   A  L ++M    + PD+ T+ 
Sbjct: 236 KMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFT 295

Query: 408 ILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQK 467
            L+DGLC+ N + +AV +   +        +  +N ++DG C+A +L+ A +    L + 
Sbjct: 296 SLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFM--LEEM 353

Query: 468 GLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKV 527
              P VV+++IMI GLC+  +  +A + +    +  C P+VV + T++ G  +  K  + 
Sbjct: 354 DCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEA 413

Query: 528 VELLHKMAEPERNLVPDDTTFSIVV 552
             +  KM E E   +P+  T+S +V
Sbjct: 414 CRVYRKMLE-EPGCLPNSITYSTLV 437



 Score =  235 bits (600), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 142/450 (31%), Positives = 230/450 (51%), Gaps = 22/450 (4%)

Query: 56  LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNI 115
           L+EAR F   M +   +P + ++ +L   + K    D  ++   K+     +P  +T N 
Sbjct: 62  LHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRK-KCVPTAVTYNS 120

Query: 116 LINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLH 175
           LI+       GLC   R  EA  L + M+  G  PD+ TY TLI GFC++     ALR+ 
Sbjct: 121 LIS-------GLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVF 173

Query: 176 KKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEM-KGRGINPAVVVCTTL 234
           +++V+  +      + ++ +YS +ID LCKEG + +A +LF  M K     P  V   +L
Sbjct: 174 EQLVARGF------RPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSL 227

Query: 235 IHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGL 294
           I GFC  G  +E   L   M + G  P+++T+  +++  CK  ++++A  LL  M ++GL
Sbjct: 228 ISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGL 287

Query: 295 NPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMS 354
            PD  T+ SLMDG C   R+  A  I   M  K C  TV +YN +++GYC+   +EEA  
Sbjct: 288 TPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARK 347

Query: 355 LYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLC 414
              + +       V+++N ++ GL +  ++  A +L +E +     PD+  Y  +IDGLC
Sbjct: 348 FMLEEMD--CPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLC 405

Query: 415 KNNCVQEAVKLFH-MLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTV 473
           +   V EA +++  MLE          ++ L+ GLC AG LD A        +KG VP +
Sbjct: 406 REKKVDEACRVYRKMLEEPGCLPNSITYSTLVTGLCNAGMLDRARGYI----EKGCVPNI 461

Query: 474 VTYSIMIHGLCRKGKLEKANDFLLYMEKNG 503
            TY+++I    +  + E A + L  M + G
Sbjct: 462 GTYNLLIDAFRKANRDEDARELLDDMVQRG 491



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 125/398 (31%), Positives = 209/398 (52%), Gaps = 12/398 (3%)

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
           +  +Y+ +I  LCK   +++A     +M  +G +P V   T +IH  C      E     
Sbjct: 10  DFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFL 69

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
            EM +    PN++T+ V+ID LCKGG+++EA  LL  M ++ + P   TYNSL+ G C  
Sbjct: 70  EEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCV-PTAVTYNSLISGLCKA 128

Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
            R   A ++   M   GC   + +Y  LI G+CK    ++A+ ++ Q+++ G R  V+TY
Sbjct: 129 ERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTY 188

Query: 372 NTLLSGLFQAGQAGYAQKLFDEM-KLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLE 430
           + L+ GL + G+   A  LF  M K  +  P+  TYN LI G C+   + EA+ L   + 
Sbjct: 189 SCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMA 248

Query: 431 MNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLE 490
                  +  +  L++G CK  RLD+A++L +++ +KGL P VVT++ ++ GLCR+ +L 
Sbjct: 249 ETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLS 308

Query: 491 KANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSI 550
            A   L  M +  C+P V T+NT++ G+ + N+    +E   K    E +  P+  +F+I
Sbjct: 309 DAVHILGEMRRKSCSPTVYTYNTILDGYCRANQ----LEEARKFMLEEMDCPPNVVSFNI 364

Query: 551 VVDLLAKDEKYHEC-SAVSKSSYRAC-----LYVTIFQ 582
           ++  L K  +  E    V ++  R C     +Y T+  
Sbjct: 365 MIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVID 402



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 86/268 (32%), Positives = 131/268 (48%), Gaps = 39/268 (14%)

Query: 326 SKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAG 385
           +  C    V+Y  LI G CK+  +E+A+    +++S G    V TY  ++  L    +  
Sbjct: 4   TNSCSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLH 63

Query: 386 YAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLI 445
            A+K  +EM   N+ P++ TY +LIDGLCK   V EAV L   +        +  +N LI
Sbjct: 64  EARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCVPTAV-TYNSLI 122

Query: 446 DGLCKAGRLDNAWEL-----------------------------------FHKLPQKGLV 470
            GLCKA R   A++L                                   F +L  +G  
Sbjct: 123 SGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFR 182

Query: 471 PTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNG-CAPNVVTFNTLMHGFLQNNKTSKVVE 529
           P VVTYS +I GLC++G+L++A D    M K+G C PN VT+N+L+ GF +  K  + + 
Sbjct: 183 PDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMN 242

Query: 530 LLHKMAEPERNLVPDDTTFSIVVDLLAK 557
           LL +MAE   +  PD  T++ +++   K
Sbjct: 243 LLERMAETGSS--PDVVTYTTLMNGFCK 268



 Score =  119 bits (297), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 65/205 (31%), Positives = 104/205 (50%), Gaps = 3/205 (1%)

Query: 359 IISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNC 418
           + +N      +TY +L+ GL +  +   A     +M      PD+ TY  +I  LC  N 
Sbjct: 2   VATNSCSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENR 61

Query: 419 VQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSI 478
           + EA K    +        +  +  LIDGLCK GR+D A  L  K+ +K  VPT VTY+ 
Sbjct: 62  LHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKM-RKKCVPTAVTYNS 120

Query: 479 MIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPE 538
           +I GLC+  +  +A D L  M  +GC P++ T+ TL+ GF ++ K+   + +  ++    
Sbjct: 121 LISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLV--A 178

Query: 539 RNLVPDDTTFSIVVDLLAKDEKYHE 563
           R   PD  T+S ++D L K+ +  E
Sbjct: 179 RGFRPDVVTYSCLIDGLCKEGRLKE 203



 Score = 82.4 bits (202), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 46/136 (33%), Positives = 66/136 (48%), Gaps = 3/136 (2%)

Query: 428 MLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKG 487
           M+  N        +  LI GLCK  RL+ A     K+  KG  P V TY+ +IH LC + 
Sbjct: 1   MVATNSCSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVEN 60

Query: 488 KLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTT 547
           +L +A  FL  M      PNVVT+  L+ G  +  +  + V LL KM    +  VP   T
Sbjct: 61  RLHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKM---RKKCVPTAVT 117

Query: 548 FSIVVDLLAKDEKYHE 563
           ++ ++  L K E+  E
Sbjct: 118 YNSLISGLCKAERASE 133


>gi|225430498|ref|XP_002283327.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
           chloroplastic [Vitis vinifera]
 gi|296082142|emb|CBI21147.3| unnamed protein product [Vitis vinifera]
          Length = 1113

 Score =  254 bits (649), Expect = 9e-65,   Method: Compositional matrix adjust.
 Identities = 148/467 (31%), Positives = 254/467 (54%), Gaps = 15/467 (3%)

Query: 94  VISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVI 153
            +  YR++VS G+ P   T + L+   G +         I+    L + M + G+RP++ 
Sbjct: 211 ALKVYRRMVSEGIKPSLKTYSALMVALGKRRD-------IETVMGLLQEMESLGLRPNIY 263

Query: 154 TYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAK 213
           T+   I    R G +  A  + K+M             ++ +Y+++ID+LC  G ++ AK
Sbjct: 264 TFTICIRILGRAGKIDEAYGILKRMDDAG------CGPDVVTYTVLIDALCNAGKLNNAK 317

Query: 214 ELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCL 273
           ELFL+MK     P  V   TL+  F   G+ + +   + EM   G  P+++TF ++ID L
Sbjct: 318 ELFLKMKASSHKPDRVTYITLLDKFSDHGDLDAIKEFWSEMEADGYLPDVVTFTILIDAL 377

Query: 274 CKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTV 333
           CK GK++EA G L++M ++G+ P+  TYN+L+ G   + R+D A E+F SM S G + T 
Sbjct: 378 CKVGKVDEAFGTLDVMKKQGVAPNLHTYNTLICGLLRLNRLDEALELFNSMESLGLETTA 437

Query: 334 VSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDE 393
            +Y + I+ Y K     +A+  + ++ +NG+   ++  N  L  L + G+   A++ F+ 
Sbjct: 438 YTYILFIDYYGKSGESGKAIKTFEKMKTNGIVPNIVACNASLYSLAEQGRLEEAKEFFNG 497

Query: 394 MKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGR 453
           +K   + PD  TYNIL+    K   V +A+KL   +E N  +  + I N LID L KA R
Sbjct: 498 LKKCGLAPDAITYNILMRCYGKAGRVDDAIKLLSEMEENGCDPEVVIINSLIDTLYKADR 557

Query: 454 LDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNT 513
           +D AW++F ++ +  L PTVVTY+ ++ GL ++G++++A      M  + C PN ++FNT
Sbjct: 558 VDEAWKMFQRMKEMKLAPTVVTYNTLLAGLGKEGRVQEATALFKGMIADDCPPNTISFNT 617

Query: 514 LMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEK 560
           L+    +N +    +++L +M   E N  PD  T++ V+  L K+ +
Sbjct: 618 LLDCLCKNGEVDLALKMLFRMT--EMNCFPDVLTYNTVIYGLIKENR 662



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 155/525 (29%), Positives = 240/525 (45%), Gaps = 74/525 (14%)

Query: 56   LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNI 115
            + EA   F  M      P   SFN L   + KN   D  +    ++  +   PD LT N 
Sbjct: 593  VQEATALFKGMIADDCPPNTISFNTLLDCLCKNGEVDLALKMLFRMTEMNCFPDVLTYNT 652

Query: 116  LINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLH 175
            +I        GL  ENR+  A WLF  M    + PD +T  TL+ G  + G +  A R+ 
Sbjct: 653  VI-------YGLIKENRVNYAFWLFHQMKKV-IYPDYVTLCTLLPGVIKDGRIEDAFRVA 704

Query: 176  KKMVS--GDYENGL--------------ISKTNIFSYSIIIDS--------------LCK 205
            K+ V   GD+ +G               I ++ +F+ S++ ++              LCK
Sbjct: 705  KEFVHHVGDHADGSFWEDLMGGILIEAEIGQSILFAESLVCNTICEDDSVLIPLVKFLCK 764

Query: 206  EGLVDKAKELFLEM-KGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLL 264
             G    A  +FL++ K   I P++    +LI G   A   E   GLF +M + G  P++ 
Sbjct: 765  HGKAVDAYNVFLKLTKSFCITPSLEAYNSLIDGLLKARLTEMAWGLFYKMKNAGCTPDVF 824

Query: 265  TFNVMIDCLCKGGKINEANGLLELMIQRG------------------------------- 293
            T+N+ +D L K GKI E   L E M+ RG                               
Sbjct: 825  TYNLFLDALGKSGKIKELFDLYEEMLFRGCKPNTITHNIVIFGLVKSNSLDKAIDLYYDL 884

Query: 294  ----LNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNV 349
                 +P  +TY  L+DG   +GR++ A++ F  M   GC      YNIL+NG+ K  +V
Sbjct: 885  MSGDFSPTPWTYGPLIDGLLKLGRLEEAKQFFEEMLDYGCMPNCPLYNILMNGFGKQGDV 944

Query: 350  EEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNIL 409
            E A  L+R+++  G+R  + +Y+ ++  L   G+   A   F+E+KL  ++PDL  YN++
Sbjct: 945  ETACELFRRMVKEGIRPDLKSYSIMVDCLCMVGKVDDALHYFEELKLSGLDPDLVCYNLM 1004

Query: 410  IDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGL 469
            I+GL ++  V+EA+ LF  +        +  +N LI  L  AG ++ A +++ +L  KGL
Sbjct: 1005 INGLGRSQRVEEALSLFDEMRNRGITPDLYTYNALILNLGIAGMVEEAGKMYEELQLKGL 1064

Query: 470  VPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTL 514
             P V TY+ +I G    G  ++A      M   GC PN  TF  L
Sbjct: 1065 EPNVFTYNALIRGHSMSGNPDRAYAVYKKMMVGGCRPNTGTFAQL 1109



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 132/466 (28%), Positives = 227/466 (48%), Gaps = 10/466 (2%)

Query: 127 LCVENRIKEATWLFKNMIAFGVRPDVITYGTLING-FCRTGNLSVALRLHKKMVSGDYEN 185
           L    R+++   +F  M    ++  + TY T+    + R G     + L K    G   N
Sbjct: 132 LRAHRRVEDMVVVFNLMQKQIIKRSINTYLTIFKVLYIRGGLREAPVALEKMRKVGFVLN 191

Query: 186 GLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWE 245
           G       +SY  +I  L K G   +A +++  M   GI P++   + L+       + E
Sbjct: 192 G-------YSYIGLIHLLLKSGFCREALKVYRRMVSEGIKPSLKTYSALMVALGKRRDIE 244

Query: 246 EVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLM 305
            V GL  EM  LG RPN+ TF + I  L + GKI+EA G+L+ M   G  PD  TY  L+
Sbjct: 245 TVMGLLQEMESLGLRPNIYTFTICIRILGRAGKIDEAYGILKRMDDAGCGPDVVTYTVLI 304

Query: 306 DGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVR 365
           D  C  G+++ A+E+FL M +   K   V+Y  L++ +    +++     + ++ ++G  
Sbjct: 305 DALCNAGKLNNAKELFLKMKASSHKPDRVTYITLLDKFSDHGDLDAIKEFWSEMEADGYL 364

Query: 366 QTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKL 425
             V+T+  L+  L + G+   A    D MK   V P+L TYN LI GL + N + EA++L
Sbjct: 365 PDVVTFTILIDALCKVGKVDEAFGTLDVMKKQGVAPNLHTYNTLICGLLRLNRLDEALEL 424

Query: 426 FHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCR 485
           F+ +E    E     +   ID   K+G    A + F K+   G+VP +V  +  ++ L  
Sbjct: 425 FNSMESLGLETTAYTYILFIDYYGKSGESGKAIKTFEKMKTNGIVPNIVACNASLYSLAE 484

Query: 486 KGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDD 545
           +G+LE+A +F   ++K G AP+ +T+N LM  + +  +    ++LL +M   E    P+ 
Sbjct: 485 QGRLEEAKEFFNGLKKCGLAPDAITYNILMRCYGKAGRVDDAIKLLSEME--ENGCDPEV 542

Query: 546 TTFSIVVDLLAKDEKYHECSAVSKSSYRACLYVTIFQPSSLGSMIG 591
              + ++D L K ++  E   + +      L  T+   ++L + +G
Sbjct: 543 VIINSLIDTLYKADRVDEAWKMFQRMKEMKLAPTVVTYNTLLAGLG 588



 Score =  178 bits (451), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 137/512 (26%), Positives = 238/512 (46%), Gaps = 22/512 (4%)

Query: 56  LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNI 115
           L+EA   F  M  +       ++ L      K+      I  + K+ + G++P+ +  N 
Sbjct: 418 LDEALELFNSMESLGLETTAYTYILFIDYYGKSGESGKAIKTFEKMKTNGIVPNIVACNA 477

Query: 116 LINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLH 175
            +         L  + R++EA   F  +   G+ PD ITY  L+  + + G +  A++L 
Sbjct: 478 SL-------YSLAEQGRLEEAKEFFNGLKKCGLAPDAITYNILMRCYGKAGRVDDAIKLL 530

Query: 176 KKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLI 235
            +M     ENG   +  I +   +ID+L K   VD+A ++F  MK   + P VV   TL+
Sbjct: 531 SEM----EENGCDPEVVIINS--LIDTLYKADRVDEAWKMFQRMKEMKLAPTVVTYNTLL 584

Query: 236 HGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLN 295
            G    G  +E   LF  M+     PN ++FN ++DCLCK G+++ A  +L  M +    
Sbjct: 585 AGLGKEGRVQEATALFKGMIADDCPPNTISFNTLLDCLCKNGEVDLALKMLFRMTEMNCF 644

Query: 296 PDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSL 355
           PD  TYN+++ G     R++ A  +F  M  K      V+   L+ G  K   +E+A  +
Sbjct: 645 PDVLTYNTVIYGLIKENRVNYAFWLFHQM-KKVIYPDYVTLCTLLPGVIKDGRIEDAFRV 703

Query: 356 YRQIISN-GVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLC 414
            ++ + + G       +  L+ G+    + G +    + +    +  D S    L+  LC
Sbjct: 704 AKEFVHHVGDHADGSFWEDLMGGILIEAEIGQSILFAESLVCNTICEDDSVLIPLVKFLC 763

Query: 415 KNNCVQEAVKLFHMLEMNK---FEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVP 471
           K+    +A  +F  L++ K       +E +N LIDGL KA   + AW LF+K+   G  P
Sbjct: 764 KHGKAVDAYNVF--LKLTKSFCITPSLEAYNSLIDGLLKARLTEMAWGLFYKMKNAGCTP 821

Query: 472 TVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELL 531
            V TY++ +  L + GK+++  D    M   GC PN +T N ++ G +++N   K ++L 
Sbjct: 822 DVFTYNLFLDALGKSGKIKELFDLYEEMLFRGCKPNTITHNIVIFGLVKSNSLDKAIDLY 881

Query: 532 HKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
           + +   +    P   T+  ++D L K  +  E
Sbjct: 882 YDLMSGD--FSPTPWTYGPLIDGLLKLGRLEE 911



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 138/505 (27%), Positives = 228/505 (45%), Gaps = 24/505 (4%)

Query: 56  LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNI 115
           L EA+ FF  +     +P   ++N+L     K    D  I    ++   G  P+ + +N 
Sbjct: 488 LEEAKEFFNGLKKCGLAPDAITYNILMRCYGKAGRVDDAIKLLSEMEENGCDPEVVIINS 547

Query: 116 LINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLH 175
           LI+        L   +R+ EA  +F+ M    + P V+TY TL+ G  + G +  A  L 
Sbjct: 548 LIDT-------LYKADRVDEAWKMFQRMKEMKLAPTVVTYNTLLAGLGKEGRVQEATALF 600

Query: 176 KKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLI 235
           K M++ D         N  S++ ++D LCK G VD A ++   M      P V+   T+I
Sbjct: 601 KGMIADD------CPPNTISFNTLLDCLCKNGEVDLALKMLFRMTEMNCFPDVLTYNTVI 654

Query: 236 HGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQR-GL 294
           +G            LF +M  +   P+ +T   ++  + K G+I +A  + +  +   G 
Sbjct: 655 YGLIKENRVNYAFWLFHQMKKV-IYPDYVTLCTLLPGVIKDGRIEDAFRVAKEFVHHVGD 713

Query: 295 NPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILI---NGYCKILNVEE 351
           + D   +  LM G  +   I  +    L   S  C       ++LI      CK     +
Sbjct: 714 HADGSFWEDLMGGILIEAEIGQS---ILFAESLVCNTICEDDSVLIPLVKFLCKHGKAVD 770

Query: 352 AMSLYRQII-SNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILI 410
           A +++ ++  S  +  ++  YN+L+ GL +A     A  LF +MK     PD+ TYN+ +
Sbjct: 771 AYNVFLKLTKSFCITPSLEAYNSLIDGLLKARLTEMAWGLFYKMKNAGCTPDVFTYNLFL 830

Query: 411 DGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLV 470
           D L K+  ++E   L+  +     +      N +I GL K+  LD A +L++ L      
Sbjct: 831 DALGKSGKIKELFDLYEEMLFRGCKPNTITHNIVIFGLVKSNSLDKAIDLYYDLMSGDFS 890

Query: 471 PTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVEL 530
           PT  TY  +I GL + G+LE+A  F   M   GC PN   +N LM+GF +        EL
Sbjct: 891 PTPWTYGPLIDGLLKLGRLEEAKQFFEEMLDYGCMPNCPLYNILMNGFGKQGDVETACEL 950

Query: 531 LHKMAEPERNLVPDDTTFSIVVDLL 555
             +M   +  + PD  ++SI+VD L
Sbjct: 951 FRRMV--KEGIRPDLKSYSIMVDCL 973



 Score =  132 bits (331), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 94/300 (31%), Positives = 146/300 (48%), Gaps = 15/300 (5%)

Query: 42   NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
            N FL    KSG I   E    +  M      P   + N++   + K+   D  I  Y  L
Sbjct: 827  NLFLDALGKSGKIK--ELFDLYEEMLFRGCKPNTITHNIVIFGLVKSNSLDKAIDLYYDL 884

Query: 102  VSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLING 161
            +S    P   T   LI+       GL    R++EA   F+ M+ +G  P+   Y  L+NG
Sbjct: 885  MSGDFSPTPWTYGPLID-------GLLKLGRLEEAKQFFEEMLDYGCMPNCPLYNILMNG 937

Query: 162  FCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKG 221
            F + G++  A  L ++MV    + G+  + ++ SYSI++D LC  G VD A   F E+K 
Sbjct: 938  FGKQGDVETACELFRRMV----KEGI--RPDLKSYSIMVDCLCMVGKVDDALHYFEELKL 991

Query: 222  RGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINE 281
             G++P +V    +I+G   +   EE   LF EM + G  P+L T+N +I  L   G + E
Sbjct: 992  SGLDPDLVCYNLMINGLGRSQRVEEALSLFDEMRNRGITPDLYTYNALILNLGIAGMVEE 1051

Query: 282  ANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILIN 341
            A  + E +  +GL P+ FTYN+L+ G+ + G  D A  ++  M   GC+    ++  L N
Sbjct: 1052 AGKMYEELQLKGLEPNVFTYNALIRGHSMSGNPDRAYAVYKKMMVGGCRPNTGTFAQLPN 1111



 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 53/223 (23%), Positives = 103/223 (46%), Gaps = 2/223 (0%)

Query: 331 HTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKL 390
           HT  + N ++        VE+ + ++  +    +++++ TY T+   L+  G    A   
Sbjct: 120 HTTETCNYVLEMLRAHRRVEDMVVVFNLMQKQIIKRSINTYLTIFKVLYIRGGLREAPVA 179

Query: 391 FDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCK 450
            ++M+      +  +Y  LI  L K+   +EA+K++  +     +  ++ ++ L+  L K
Sbjct: 180 LEKMRKVGFVLNGYSYIGLIHLLLKSGFCREALKVYRRMVSEGIKPSLKTYSALMVALGK 239

Query: 451 AGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVT 510
              ++    L  ++   GL P + T++I I  L R GK+++A   L  M+  GC P+VVT
Sbjct: 240 RRDIETVMGLLQEMESLGLRPNIYTFTICIRILGRAGKIDEAYGILKRMDDAGCGPDVVT 299

Query: 511 FNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
           +  L+       K +   EL  KM        PD  T+  ++D
Sbjct: 300 YTVLIDALCNAGKLNNAKELFLKMKASSHK--PDRVTYITLLD 340


>gi|15231863|ref|NP_190938.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75174107|sp|Q9LFF1.1|PP281_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g53700, chloroplastic; AltName: Full=Protein MATERNAL
           EFFECT EMBRYO ARREST 40; Flags: Precursor
 gi|6729521|emb|CAB67677.1| putative protein [Arabidopsis thaliana]
 gi|15982931|gb|AAL09812.1| AT3g53700/F4P12_400 [Arabidopsis thaliana]
 gi|332645608|gb|AEE79129.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 754

 Score =  254 bits (649), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 142/479 (29%), Positives = 250/479 (52%), Gaps = 13/479 (2%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
           P +S+FN+L  A+ +       I     + S GL+PD  T   ++       +G   E  
Sbjct: 187 PDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVM-------QGYIEEGD 239

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
           +  A  + + M+ FG     ++   +++GFC+ G +  AL   ++M + D   G     +
Sbjct: 240 LDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQD---GFFP--D 294

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
            ++++ +++ LCK G V  A E+   M   G +P V    ++I G C  G  +E   +  
Sbjct: 295 QYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLD 354

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
           +M+     PN +T+N +I  LCK  ++ EA  L  ++  +G+ PD  T+NSL+ G CL  
Sbjct: 355 QMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTR 414

Query: 313 RIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYN 372
               A E+F  M SKGC+    +YN+LI+  C    ++EA+++ +Q+  +G  ++VITYN
Sbjct: 415 NHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYN 474

Query: 373 TLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMN 432
           TL+ G  +A +   A+++FDEM+++ V  +  TYN LIDGLCK+  V++A +L   + M 
Sbjct: 475 TLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIME 534

Query: 433 KFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKA 492
             +     +N L+   C+ G +  A ++   +   G  P +VTY  +I GLC+ G++E A
Sbjct: 535 GQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVA 594

Query: 493 NDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIV 551
           +  L  ++  G       +N ++ G  +  KT++ + L  +M E +    PD  ++ IV
Sbjct: 595 SKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLE-QNEAPPDAVSYRIV 652



 Score =  240 bits (613), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 150/466 (32%), Positives = 227/466 (48%), Gaps = 16/466 (3%)

Query: 77  SFNLLFGAVAKNRHYDAVISFYRKLVSI-GLLPDFLTLNILINCFGNKERGLCVENRIKE 135
           S N++     K    +  ++F +++ +  G  PD  T N L+N       GLC    +K 
Sbjct: 261 SVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVN-------GLCKAGHVKH 313

Query: 136 ATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFS 195
           A  +   M+  G  PDV TY ++I+G C+ G +  A+ +  +M++ D         N  +
Sbjct: 314 AIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRD------CSPNTVT 367

Query: 196 YSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEML 255
           Y+ +I +LCKE  V++A EL   +  +GI P V    +LI G C   N      LF EM 
Sbjct: 368 YNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMR 427

Query: 256 DLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRID 315
             G  P+  T+N++ID LC  GK++EA  +L+ M   G      TYN+L+DG+C   +  
Sbjct: 428 SKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTR 487

Query: 316 TAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLL 375
            A EIF  M   G     V+YN LI+G CK   VE+A  L  Q+I  G +    TYN+LL
Sbjct: 488 EAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLL 547

Query: 376 SGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFE 435
           +   + G    A  +   M     EPD+ TY  LI GLCK   V+ A KL   ++M    
Sbjct: 548 THFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGIN 607

Query: 436 FGIEIFNCLIDGLCKAGRLDNAWELFHK-LPQKGLVPTVVTYSIMIHGLCR-KGKLEKAN 493
                +N +I GL +  +   A  LF + L Q    P  V+Y I+  GLC   G + +A 
Sbjct: 608 LTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAV 667

Query: 494 DFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPER 539
           DFL+ + + G  P   +   L  G L  +    +V+L++ + +  R
Sbjct: 668 DFLVELLEKGFVPEFSSLYMLAEGLLTLSMEETLVKLVNMVMQKAR 713



 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 165/564 (29%), Positives = 267/564 (47%), Gaps = 31/564 (5%)

Query: 21  LSSLFKSPRQIAAVS-----------SPETQL-NEFLHENCKSGIINLNEARYFFGYMTH 68
           L SL   P   AA+            SPE  L  E L    +SG  + ++ +     M  
Sbjct: 54  LDSLRSQPDDSAALRLFNLASKKPNFSPEPALYEEILLRLGRSG--SFDDMKKILEDMKS 111

Query: 69  MQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVS-IGLLPDFLTLNILINCFGNKERGL 127
            +     S+F +L  + A+    D ++S    ++   GL PD    N ++N        L
Sbjct: 112 SRCEMGTSTFLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNL-------L 164

Query: 128 CVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGL 187
              N +K        M  +G++PDV T+  LI   CR   L  A+ + + M S     GL
Sbjct: 165 VDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPS----YGL 220

Query: 188 ISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEV 247
           +     F  + ++    +EG +D A  +  +M   G + + V    ++HGFC  G  E+ 
Sbjct: 221 VPDEKTF--TTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDA 278

Query: 248 NGLFIEMLDL-GPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMD 306
                EM +  G  P+  TFN +++ LCK G +  A  ++++M+Q G +PD +TYNS++ 
Sbjct: 279 LNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVIS 338

Query: 307 GYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQ 366
           G C +G +  A E+   M ++ C    V+YN LI+  CK   VEEA  L R + S G+  
Sbjct: 339 GLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILP 398

Query: 367 TVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLF 426
            V T+N+L+ GL        A +LF+EM+    EPD  TYN+LID LC    + EA+ + 
Sbjct: 399 DVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNML 458

Query: 427 HMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRK 486
             +E++     +  +N LIDG CKA +   A E+F ++   G+    VTY+ +I GLC+ 
Sbjct: 459 KQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKS 518

Query: 487 GKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDT 546
            ++E A   +  M   G  P+  T+N+L+  F +     K  +++  M        PD  
Sbjct: 519 RRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMT--SNGCEPDIV 576

Query: 547 TFSIVVDLLAKDEKYHECSAVSKS 570
           T+  ++  L K  +    S + +S
Sbjct: 577 TYGTLISGLCKAGRVEVASKLLRS 600



 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 123/414 (29%), Positives = 198/414 (47%), Gaps = 25/414 (6%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CK G   + EA      M     SP   ++N L   + K    +      R L S G+LP
Sbjct: 341 CKLG--EVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILP 398

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           D  T N LI       +GLC+    + A  LF+ M + G  PD  TY  LI+  C  G L
Sbjct: 399 DVCTFNSLI-------QGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKL 451

Query: 169 SVALRLHKKM-VSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPA 227
             AL + K+M +SG          ++ +Y+ +ID  CK     +A+E+F EM+  G++  
Sbjct: 452 DEALNMLKQMELSG-------CARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRN 504

Query: 228 VVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLE 287
            V   TLI G C +   E+   L  +M+  G +P+  T+N ++   C+GG I +A  +++
Sbjct: 505 SVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQ 564

Query: 288 LMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKIL 347
            M   G  PD  TY +L+ G C  GR++ A ++  S+  KG   T  +YN +I G  +  
Sbjct: 565 AMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKR 624

Query: 348 NVEEAMSLYRQII-SNGVRQTVITYNTLLSGLFQAGQAGYAQKLFD---EMKLYNVEPDL 403
              EA++L+R+++  N      ++Y  +  GL   G  G  ++  D   E+      P+ 
Sbjct: 625 KTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGG--GPIREAVDFLVELLEKGFVPEF 682

Query: 404 STYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNA 457
           S+  +L +GL   +  +  VKL +M+ M K  F  E  + ++ GL K  +  +A
Sbjct: 683 SSLYMLAEGLLTLSMEETLVKLVNMV-MQKARFSEEEVS-MVKGLLKIRKFQDA 734


>gi|4455203|emb|CAB36526.1| putative protein [Arabidopsis thaliana]
 gi|7269532|emb|CAB79535.1| putative protein [Arabidopsis thaliana]
          Length = 439

 Score =  254 bits (648), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 152/452 (33%), Positives = 246/452 (54%), Gaps = 20/452 (4%)

Query: 66  MTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVS---IGLLPDFLTLNILINCFGN 122
           M +  P P I  FN +  A+AK + YD VI+ ++++ +   I + PD  T NIL+NCF  
Sbjct: 1   MAYSYPLPSIVEFNKVLTAIAKMQMYDVVINLWKRIENAEGIEISPDLYTCNILVNCF-- 58

Query: 123 KERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGD 182
                C   +   A      M+  G+ PD++T  +L+NGFC + ++  A+      V+G 
Sbjct: 59  -----CRCFQPSSALSYLGKMMKLGIEPDIVTASSLVNGFCLSNSIKDAV-----YVAGQ 108

Query: 183 YENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAG 242
            E   I K ++   +I+ID+LCK  LV  A E+   MK RGI+P VV  ++LI G C +G
Sbjct: 109 MEKMGI-KRDVVVDTILIDTLCKNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSG 167

Query: 243 NWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYN 302
              +      EM      PN++TF+ +ID   K GK+++ + + ++MIQ  ++P+ FTY+
Sbjct: 168 RLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYS 227

Query: 303 SLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISN 362
           SL+ G C+  R+D A ++   M SKGC   VV+Y+ L NG+ K   V++ + L   +   
Sbjct: 228 SLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQR 287

Query: 363 GVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEA 422
           GV    ++ NTL+ G FQAG+   A  +F  M    + P++ +YNI++ GL  N  V++A
Sbjct: 288 GVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKA 347

Query: 423 VKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHG 482
           +  F  ++  + +  I  +  +I G+CKA  +  A++LF+KL  K + P    Y+IMI  
Sbjct: 348 LSRFEHMQKTRNDLDIITYTIMIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIMIAE 407

Query: 483 LCRKGKLEKANDFLLYMEK----NGCAPNVVT 510
           L R G   +A+    + +K    N  AP  V+
Sbjct: 408 LNRAGMRTEADALNRFYQKHVRQNESAPAEVS 439



 Score =  165 bits (417), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 102/420 (24%), Positives = 212/420 (50%), Gaps = 5/420 (1%)

Query: 150 PDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLV 209
           P ++ +  ++    +     V + L K++ + +   G+    ++++ +I+++  C+    
Sbjct: 8   PSIVEFNKVLTAIAKMQMYDVVINLWKRIENAE---GIEISPDLYTCNILVNCFCRCFQP 64

Query: 210 DKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVM 269
             A     +M   GI P +V  ++L++GFC + + ++   +  +M  +G + +++   ++
Sbjct: 65  SSALSYLGKMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTIL 124

Query: 270 IDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGC 329
           ID LCK   +  A  +L+ M  RG++P+  TY+SL+ G C  GR+  A      M SK  
Sbjct: 125 IDTLCKNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKI 184

Query: 330 KHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQK 389
              V++++ LI+ Y K   + +  S+Y+ +I   +   V TY++L+ GL    +   A K
Sbjct: 185 NPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIK 244

Query: 390 LFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLC 449
           + D M      P++ TY+ L +G  K++ V + +KL   +            N LI G  
Sbjct: 245 MLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYF 304

Query: 450 KAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVV 509
           +AG++D A  +F  +   GL+P + +Y+I++ GL   G++EKA     +M+K     +++
Sbjct: 305 QAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDII 364

Query: 510 TFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSK 569
           T+  ++HG  +     +  +L +K+    + + PD   ++I++  L +     E  A+++
Sbjct: 365 TYTIMIHGMCKACMVKEAYDLFYKLK--FKRVEPDFKAYTIMIAELNRAGMRTEADALNR 422



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 55/190 (28%), Positives = 99/190 (52%), Gaps = 6/190 (3%)

Query: 399 VEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKF--EFGIEIFNCLIDGLCKAGRLDN 456
           + PDL T NIL++  C+  C Q +  L ++ +M K   E  I   + L++G C +  + +
Sbjct: 44  ISPDLYTCNILVNCFCR--CFQPSSALSYLGKMMKLGIEPDIVTASSLVNGFCLSNSIKD 101

Query: 457 AWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMH 516
           A  +  ++ + G+   VV  +I+I  LC+   +  A + L  M+  G +PNVVT+++L+ 
Sbjct: 102 AVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPALEVLKRMKDRGISPNVVTYSSLIT 161

Query: 517 GFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKSSYRACL 576
           G  ++ + +     LH+M   + N  P+  TFS ++D  AK  K  +  +V K   +  +
Sbjct: 162 GLCKSGRLADAERRLHEMDSKKIN--PNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSI 219

Query: 577 YVTIFQPSSL 586
              +F  SSL
Sbjct: 220 DPNVFTYSSL 229



 Score = 41.6 bits (96), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 37/143 (25%), Positives = 61/143 (42%), Gaps = 9/143 (6%)

Query: 34  VSSPETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDA 93
           V++     N  +    ++G I+L  A   FGYMT     P I S+N++   +  N   + 
Sbjct: 289 VAANTVSCNTLIKGYFQAGKIDL--ALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEK 346

Query: 94  VISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVI 153
            +S +  +       D +T  I+I+       G+C    +KEA  LF  +    V PD  
Sbjct: 347 ALSRFEHMQKTRNDLDIITYTIMIH-------GMCKACMVKEAYDLFYKLKFKRVEPDFK 399

Query: 154 TYGTLINGFCRTGNLSVALRLHK 176
            Y  +I    R G  + A  L++
Sbjct: 400 AYTIMIAELNRAGMRTEADALNR 422


>gi|359474768|ref|XP_002270963.2| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic [Vitis vinifera]
          Length = 1022

 Score =  254 bits (648), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 164/521 (31%), Positives = 263/521 (50%), Gaps = 25/521 (4%)

Query: 39  TQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFY 98
           T +N F    CK G   + +A   F  M  +  SP + ++N L   + K+ + D    F 
Sbjct: 318 TAINAF----CKGG--KVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFK 371

Query: 99  RKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTL 158
            K+V  G+    +T ++LIN       GL    +  EA  + K  +  G  P+ + Y TL
Sbjct: 372 EKMVKDGVNATLITYSVLIN-------GLMKLEKFNEANSVLKETLEKGFTPNEVVYNTL 424

Query: 159 INGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLE 218
           I+G+C+ GNL  ALR+   MVS     G+    N  + + II   CK G +++A+ +  E
Sbjct: 425 IDGYCKMGNLGDALRIRGDMVS----KGI--NPNSVTLNSIIQGFCKIGQMEQAECILEE 478

Query: 219 MKGRG--INPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKG 276
           M  RG  INP     TT+IH  C    +E       EML    RPN      ++  LCK 
Sbjct: 479 MLSRGFSINPGAF--TTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKE 536

Query: 277 GKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSY 336
           GK ++A  L   ++++G   +  T N+L+ G C  G +  A  +   M  +G     ++Y
Sbjct: 537 GKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITY 596

Query: 337 NILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKL 396
           N LI+G CK   VEE   L  +++  G+     TYN L+ G+ + G+   A  L++E K 
Sbjct: 597 NTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKS 656

Query: 397 YNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDN 456
            ++ P++ TY ++IDG CK + ++E  KLF  L     E    ++N LI   C+ G    
Sbjct: 657 RDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVE 716

Query: 457 AWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMH 516
           A++L   +  KG+ PT  TYS +IHG+C  G++E A   +  M K G  PNVV +  L+ 
Sbjct: 717 AFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIG 776

Query: 517 GFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAK 557
           G+ +  +  KVV +L +M+    ++ P+  T+++++D  +K
Sbjct: 777 GYCKLGQMDKVVNVLQEMS--SYDIHPNKITYTVMIDGYSK 815



 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 139/520 (26%), Positives = 244/520 (46%), Gaps = 38/520 (7%)

Query: 33  AVSSPETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYD 92
            VS      N  +H  CK G  NL+EA  F   M     +  + ++++L   + K   ++
Sbjct: 343 GVSPNVVTYNNLIHGLCKHG--NLDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFN 400

Query: 93  AVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDV 152
              S  ++ +  G  P+ +  N LI+       G C    + +A  +  +M++ G+ P+ 
Sbjct: 401 EANSVLKETLEKGFTPNEVVYNTLID-------GYCKMGNLGDALRIRGDMVSKGINPNS 453

Query: 153 ITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSY---------------- 196
           +T  ++I GFC+ G +  A  + ++M+S  +     + T I  +                
Sbjct: 454 VTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLRE 513

Query: 197 -------------SIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGN 243
                        + ++  LCKEG    A EL+  +  +G    +V    LIHG C  GN
Sbjct: 514 MLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGN 573

Query: 244 WEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNS 303
            +E   L  +ML+ G   + +T+N +I   CK GK+ E   L   M+++G+ PD FTYN 
Sbjct: 574 MQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNL 633

Query: 304 LMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNG 363
           L+ G C +G++D A  ++    S+     V +Y ++I+GYCK   +EE   L+ ++++  
Sbjct: 634 LIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQN 693

Query: 364 VRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAV 423
           +    + YNTL+    + G    A KL D+M+   + P  +TY+ LI G+C    +++A 
Sbjct: 694 LELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAK 753

Query: 424 KLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGL 483
            L   +        +  +  LI G CK G++D    +  ++    + P  +TY++MI G 
Sbjct: 754 CLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGY 813

Query: 484 CRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNK 523
            + G ++ A   L  M   G  P+ VT+N L +GF +  K
Sbjct: 814 SKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGK 853



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 148/485 (30%), Positives = 244/485 (50%), Gaps = 16/485 (3%)

Query: 80  LLFGAVAKNRHYDAVISFYRKLVSIGLLP-DFLTLNILINCFGNKERGLCVENRIKEATW 138
           +LFG   KNRH + + S    L  +G        +++LI+ +  + R +   N I     
Sbjct: 212 VLFGD-PKNRHIE-IASAMADLNEVGESGVAVAAVDLLIHVYCTQFRNVGFRNAIG---- 265

Query: 139 LFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSI 198
           +F+ +   GV P V T   L++   +   L  +  + + M  G          +++ +S 
Sbjct: 266 VFRFLANKGVFPTVKTCTFLLSSLVKANELEKSYWVFETMRQG-------VSPDVYLFST 318

Query: 199 IIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLG 258
            I++ CK G V+ A +LF +M+  G++P VV    LIHG C  GN +E      +M+  G
Sbjct: 319 AINAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDG 378

Query: 259 PRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAR 318
               L+T++V+I+ L K  K NEAN +L+  +++G  P+   YN+L+DGYC +G +  A 
Sbjct: 379 VNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDAL 438

Query: 319 EIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGL 378
            I   M SKG     V+ N +I G+CKI  +E+A  +  +++S G       + T++  L
Sbjct: 439 RIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWL 498

Query: 379 FQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGI 438
               +   A +   EM L N+ P+      L+ GLCK     +AV+L+  L    F   +
Sbjct: 499 CMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANL 558

Query: 439 EIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLY 498
              N LI GLCK G +  A  L  K+ ++G V   +TY+ +I G C++GK+E+       
Sbjct: 559 VTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGE 618

Query: 499 MEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKD 558
           M K G  P+  T+N L+HG  +  K  + V L ++     R+LVP+  T+ +++D   K 
Sbjct: 619 MVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECK--SRDLVPNVYTYGVMIDGYCKA 676

Query: 559 EKYHE 563
           +K  E
Sbjct: 677 DKIEE 681



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 87/311 (27%), Positives = 151/311 (48%), Gaps = 15/311 (4%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
           N  +H  CK+G  N+ EA      M          ++N L     K    +       ++
Sbjct: 562 NALIHGLCKTG--NMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEM 619

Query: 102 VSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLING 161
           V  G+ PD  T N+LI+       G+C   ++ EA  L+    +  + P+V TYG +I+G
Sbjct: 620 VKQGIEPDTFTYNLLIH-------GMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDG 672

Query: 162 FCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKG 221
           +C+   +    +L  ++++ + E       N   Y+ +I + C+ G   +A +L  +M+ 
Sbjct: 673 YCKADKIEEGEKLFTELLTQNLE------LNSVVYNTLIRAYCRNGNTVEAFKLHDDMRS 726

Query: 222 RGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINE 281
           +GI P     ++LIHG C  G  E+   L  EM   G  PN++ +  +I   CK G++++
Sbjct: 727 KGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDK 786

Query: 282 ANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILIN 341
              +L+ M    ++P++ TY  ++DGY   G + TA ++   M  KG     V+YN+L N
Sbjct: 787 VVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTN 846

Query: 342 GYCKILNVEEA 352
           G+CK   +EE 
Sbjct: 847 GFCKEGKIEEG 857



 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 71/268 (26%), Positives = 115/268 (42%), Gaps = 38/268 (14%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CK G   + E     G M      P   ++NLL   + +    D  ++ + +  S  L+P
Sbjct: 604 CKEG--KVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVP 661

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           +  T  ++I+       G C  ++I+E   LF  ++   +  + + Y TLI  +CR GN 
Sbjct: 662 NVYTYGVMID-------GYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNT 714

Query: 169 SVALRLHKKMVS--------------------GDYENG--LISK-------TNIFSYSII 199
             A +LH  M S                    G  E+   LI +        N+  Y+ +
Sbjct: 715 VEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTAL 774

Query: 200 IDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGP 259
           I   CK G +DK   +  EM    I+P  +  T +I G+  +G+ +    L  EM+  G 
Sbjct: 775 IGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGI 834

Query: 260 RPNLLTFNVMIDCLCKGGKINEANGLLE 287
            P+ +T+NV+ +  CK GKI E   L E
Sbjct: 835 VPDTVTYNVLTNGFCKEGKIEEGKLLAE 862



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 49/172 (28%), Positives = 87/172 (50%), Gaps = 6/172 (3%)

Query: 403 LSTYNILIDGLC---KNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWE 459
           ++  ++LI   C   +N   + A+ +F  L        ++    L+  L KA  L+ ++ 
Sbjct: 241 VAAVDLLIHVYCTQFRNVGFRNAIGVFRFLANKGVFPTVKTCTFLLSSLVKANELEKSYW 300

Query: 460 LFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFL 519
           +F  + Q G+ P V  +S  I+  C+ GK+E A      MEK G +PNVVT+N L+HG  
Sbjct: 301 VFETMRQ-GVSPDVYLFSTAINAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLC 359

Query: 520 QNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKSS 571
           ++    +      KM +   N      T+S++++ L K EK++E ++V K +
Sbjct: 360 KHGNLDEAFRFKEKMVKDGVNATL--ITYSVLINGLMKLEKFNEANSVLKET 409


>gi|255548724|ref|XP_002515418.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223545362|gb|EEF46867.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1113

 Score =  254 bits (648), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 152/505 (30%), Positives = 271/505 (53%), Gaps = 15/505 (2%)

Query: 56  LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNI 115
           L +  + FG M          S+N L   + ++      +  YR++V  GL P   T + 
Sbjct: 175 LRQTPFAFGKMREAGFHLNAYSYNGLIHLLLQSGLCREALEMYRRMVLEGLKPSLKTFSA 234

Query: 116 LINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLH 175
           L+   G +     V++ ++E       M + G++P++ TY   I    R G +  A R+ 
Sbjct: 235 LMVATGKRRDTETVKSLLEE-------MESLGLKPNIYTYTICIRVLGRAGRIDEACRIM 287

Query: 176 KKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLI 235
           K+M     ++G     ++ +Y+++ID+LC  G +D A ELF++MK     P  V   T++
Sbjct: 288 KRM----EDDG--CGPDVVTYTVLIDALCTAGKLDDAMELFVKMKASSHKPDRVTYITML 341

Query: 236 HGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLN 295
             F   G+   V   + EM   G  P+++TF ++++ LCK G I+EA  LL++M ++G+ 
Sbjct: 342 DKFSDCGDLGRVKEFWSEMEADGYAPDVITFTILVNALCKAGNIDEAFHLLDVMRKQGVL 401

Query: 296 PDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSL 355
           P+  TYN+L+ G   V R+D A ++F +M + G   T  +Y + I+ Y K    ++A+  
Sbjct: 402 PNLHTYNTLISGLLRVNRLDDALDLFNNMETLGVVPTAYTYILFIDFYGKSGRSDKALET 461

Query: 356 YRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCK 415
           + ++   G+   ++  N  L  L + G+   A+ +F+ +K   + PD  TYN+++    K
Sbjct: 462 FEKMKIRGIAPNIVACNASLYSLAEMGRLREAKVIFNRLKSNGLAPDSVTYNMMMKCYSK 521

Query: 416 NNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVT 475
              V EA++L   +  N+ E  I + N LI+ L KAGR+D AW++F +L    L PTVVT
Sbjct: 522 AGQVDEAIELLSDMSENQCEPDIIVINSLINTLYKAGRVDEAWKMFCRLKDMKLAPTVVT 581

Query: 476 YSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMA 535
           Y+ +I GL ++G++++A +    M  NGC PN +TFNT++    +N++    +++L+KM 
Sbjct: 582 YNTLIAGLGKEGQVQRAMELFASMTGNGCPPNTITFNTILDCLCKNDEVDLALKMLYKMT 641

Query: 536 EPERNLVPDDTTFSIVVDLLAKDEK 560
               N +PD  TF+ ++  L  +++
Sbjct: 642 --TMNCMPDVLTFNTIIHGLVIEKR 664



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 138/511 (27%), Positives = 232/511 (45%), Gaps = 39/511 (7%)

Query: 55   NLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLN 114
             +  A   F  MT     P   +FN +   + KN   D  +    K+ ++  +PD LT N
Sbjct: 594  QVQRAMELFASMTGNGCPPNTITFNTILDCLCKNDEVDLALKMLYKMTTMNCMPDVLTFN 653

Query: 115  ILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRL 174
             +I+       GL +E R+ +A WLF  M    + PD +T  TL+ G  + G +  A ++
Sbjct: 654  TIIH-------GLVIEKRVSDAIWLFHQMKKM-LTPDCVTLCTLLPGVVKNGLMEDAFKI 705

Query: 175  HKKMVS-----------GDYENGLIS-----KTNIFSYSIIIDSLCKEGLVDK------- 211
             +  V             D   G+++     KT +F   ++   +CK+G V         
Sbjct: 706  AEDFVHRLGVYVDRRFWEDLMGGILTQAGTEKTILFGDRLVCGRVCKDGSVLMPIIKVLC 765

Query: 212  -------AKELFLEM-KGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNL 263
                   A+ +F+   K  G+ P +     LI GF    N E    LF EM + G  P++
Sbjct: 766  KHKQALVAQSVFIRFTKELGVKPTLESYNFLIEGFLGVHNDEMAWNLFTEMKNAGCAPDV 825

Query: 264  LTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLS 323
             T+N+++D   K GKINE   L E MI     P+  T+N ++        +D A ++F  
Sbjct: 826  FTYNLLLDAHGKSGKINELFELYEQMICSSCKPNTITHNIIIANLVKSNSLDKALDLFYD 885

Query: 324  MHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQ 383
            + S     T  +Y  L++G  K   +EEA  L+ +++  G R     YN L++G  + G 
Sbjct: 886  LVSGDFSPTPCTYGPLLDGLLKSGRLEEAKELFEEMVDYGCRPNNAIYNILINGFGKTGD 945

Query: 384  AGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNC 443
               A +LF  M    + PDL +Y  L+  LC+   V +A+  F  L+          +N 
Sbjct: 946  VNTACELFKRMVREGIRPDLKSYTSLVGCLCEAGRVDDALHYFEKLKQTGLYLDSIAYNL 1005

Query: 444  LIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNG 503
            +IDGL ++ R++ A  L+ ++  +G+ P + TY+ +I  L   G +E+A      ++  G
Sbjct: 1006 MIDGLGRSHRIEEALTLYDEMQSRGINPDLFTYNSLILNLGVAGMVEQAGKLYEELQFIG 1065

Query: 504  CAPNVVTFNTLMHGFLQNNKTSKVVELLHKM 534
              PNV T+N L+ G+  +  +     +  +M
Sbjct: 1066 LEPNVFTYNALIRGYSMSGNSDSAYAVYKRM 1096



 Score =  168 bits (425), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 135/545 (24%), Positives = 238/545 (43%), Gaps = 53/545 (9%)

Query: 56   LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNI 115
            L EA+  F  +     +P   ++N++    +K    D  I     +      PD + +N 
Sbjct: 490  LREAKVIFNRLKSNGLAPDSVTYNMMMKCYSKAGQVDEAIELLSDMSENQCEPDIIVINS 549

Query: 116  LINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLH 175
            LIN        L    R+ EA  +F  +    + P V+TY TLI G  + G +  A+ L 
Sbjct: 550  LINT-------LYKAGRVDEAWKMFCRLKDMKLAPTVVTYNTLIAGLGKEGQVQRAMELF 602

Query: 176  KKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLI 235
              M      NG     N  +++ I+D LCK   VD A ++  +M      P V+   T+I
Sbjct: 603  ASMTG----NG--CPPNTITFNTILDCLCKNDEVDLALKMLYKMTTMNCMPDVLTFNTII 656

Query: 236  HGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQR-GL 294
            HG        +   LF +M  +   P+ +T   ++  + K G + +A  + E  + R G+
Sbjct: 657  HGLVIEKRVSDAIWLFHQMKKM-LTPDCVTLCTLLPGVVKNGLMEDAFKIAEDFVHRLGV 715

Query: 295  NPDRFTYNSLMDGYC---------------LVGRIDTAREIFLSMHSKGCKH-------- 331
              DR  +  LM G                 + GR+     + + +    CKH        
Sbjct: 716  YVDRRFWEDLMGGILTQAGTEKTILFGDRLVCGRVCKDGSVLMPIIKVLCKHKQALVAQS 775

Query: 332  -------------TVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGL 378
                         T+ SYN LI G+  + N E A +L+ ++ + G    V TYN LL   
Sbjct: 776  VFIRFTKELGVKPTLESYNFLIEGFLGVHNDEMAWNLFTEMKNAGCAPDVFTYNLLLDAH 835

Query: 379  FQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGI 438
             ++G+     +L+++M   + +P+  T+NI+I  L K+N + +A+ LF+ L    F    
Sbjct: 836  GKSGKINELFELYEQMICSSCKPNTITHNIIIANLVKSNSLDKALDLFYDLVSGDFSPTP 895

Query: 439  EIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLY 498
              +  L+DGL K+GRL+ A ELF ++   G  P    Y+I+I+G  + G +  A +    
Sbjct: 896  CTYGPLLDGLLKSGRLEEAKELFEEMVDYGCRPNNAIYNILINGFGKTGDVNTACELFKR 955

Query: 499  MEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKD 558
            M + G  P++ ++ +L+    +  +    +    K+ +    L  D   +++++D L + 
Sbjct: 956  MVREGIRPDLKSYTSLVGCLCEAGRVDDALHYFEKLKQT--GLYLDSIAYNLMIDGLGRS 1013

Query: 559  EKYHE 563
             +  E
Sbjct: 1014 HRIEE 1018



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 106/396 (26%), Positives = 187/396 (47%), Gaps = 6/396 (1%)

Query: 172 LRLHKKM----VSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPA 227
           LR+H+++    V  +     I K ++ +Y II   L   G + +    F +M+  G +  
Sbjct: 134 LRIHRRVGDMVVVFNLMQNQIIKRDLNTYLIIFKGLFIRGGLRQTPFAFGKMREAGFHLN 193

Query: 228 VVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLE 287
                 LIH    +G   E   ++  M+  G +P+L TF+ ++    K         LLE
Sbjct: 194 AYSYNGLIHLLLQSGLCREALEMYRRMVLEGLKPSLKTFSALMVATGKRRDTETVKSLLE 253

Query: 288 LMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKIL 347
            M   GL P+ +TY   +      GRID A  I   M   GC   VV+Y +LI+  C   
Sbjct: 254 EMESLGLKPNIYTYTICIRVLGRAGRIDEACRIMKRMEDDGCGPDVVTYTVLIDALCTAG 313

Query: 348 NVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYN 407
            +++AM L+ ++ ++  +   +TY T+L      G  G  ++ + EM+     PD+ T+ 
Sbjct: 314 KLDDAMELFVKMKASSHKPDRVTYITMLDKFSDCGDLGRVKEFWSEMEADGYAPDVITFT 373

Query: 408 ILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQK 467
           IL++ LCK   + EA  L  ++        +  +N LI GL +  RLD+A +LF+ +   
Sbjct: 374 ILVNALCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLISGLLRVNRLDDALDLFNNMETL 433

Query: 468 GLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKV 527
           G+VPT  TY + I    + G+ +KA +    M+  G APN+V  N  ++   +  +  + 
Sbjct: 434 GVVPTAYTYILFIDFYGKSGRSDKALETFEKMKIRGIAPNIVACNASLYSLAEMGRLREA 493

Query: 528 VELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
             + +++      L PD  T+++++   +K  +  E
Sbjct: 494 KVIFNRLK--SNGLAPDSVTYNMMMKCYSKAGQVDE 527



 Score =  125 bits (315), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 90/318 (28%), Positives = 147/318 (46%), Gaps = 34/318 (10%)

Query: 52   GIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFL 111
            G+ N   A   F  M +   +P + ++NLL  A  K+   + +   Y +++     P+ +
Sbjct: 802  GVHNDEMAWNLFTEMKNAGCAPDVFTYNLLLDAHGKSGKINELFELYEQMICSSCKPNTI 861

Query: 112  TLNILIN----------------------------CFGNKERGLCVENRIKEATWLFKNM 143
            T NI+I                              +G    GL    R++EA  LF+ M
Sbjct: 862  THNIIIANLVKSNSLDKALDLFYDLVSGDFSPTPCTYGPLLDGLLKSGRLEEAKELFEEM 921

Query: 144  IAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSL 203
            + +G RP+   Y  LINGF +TG+++ A  L K+MV      G+  + ++ SY+ ++  L
Sbjct: 922  VDYGCRPNNAIYNILINGFGKTGDVNTACELFKRMV----REGI--RPDLKSYTSLVGCL 975

Query: 204  CKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNL 263
            C+ G VD A   F ++K  G+    +    +I G   +   EE   L+ EM   G  P+L
Sbjct: 976  CEAGRVDDALHYFEKLKQTGLYLDSIAYNLMIDGLGRSHRIEEALTLYDEMQSRGINPDL 1035

Query: 264  LTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLS 323
             T+N +I  L   G + +A  L E +   GL P+ FTYN+L+ GY + G  D+A  ++  
Sbjct: 1036 FTYNSLILNLGVAGMVEQAGKLYEELQFIGLEPNVFTYNALIRGYSMSGNSDSAYAVYKR 1095

Query: 324  MHSKGCKHTVVSYNILIN 341
            M   GC     ++  L N
Sbjct: 1096 MMVGGCSPNTGTFAQLPN 1113



 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 84/333 (25%), Positives = 151/333 (45%), Gaps = 47/333 (14%)

Query: 265 TFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSM 324
           T N M++ L    ++ +   +  LM  + +  D  TY  +  G  + G +      F  M
Sbjct: 126 TCNHMLEILRIHRRVGDMVVVFNLMQNQIIKRDLNTYLIIFKGLFIRGGLRQTPFAFGKM 185

Query: 325 HSKGCKHTVVSYNILIN-----GYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLF 379
              G      SYN LI+     G C+     EA+ +YR+++  G++ ++ T++ L+    
Sbjct: 186 REAGFHLNAYSYNGLIHLLLQSGLCR-----EALEMYRRMVLEGLKPSLKTFSALMVATG 240

Query: 380 QAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIE 439
           +       + L +EM+   ++P++ TY I I  L +   + EA ++   +E +     + 
Sbjct: 241 KRRDTETVKSLLEEMESLGLKPNIYTYTICIRVLGRAGRIDEACRIMKRMEDDGCGPDVV 300

Query: 440 IFNCLIDGLCKAGRLDNAWELFHKL------PQK-------------------------- 467
            +  LID LC AG+LD+A ELF K+      P +                          
Sbjct: 301 TYTVLIDALCTAGKLDDAMELFVKMKASSHKPDRVTYITMLDKFSDCGDLGRVKEFWSEM 360

Query: 468 ---GLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKT 524
              G  P V+T++I+++ LC+ G +++A   L  M K G  PN+ T+NTL+ G L+ N+ 
Sbjct: 361 EADGYAPDVITFTILVNALCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLISGLLRVNRL 420

Query: 525 SKVVELLHKMAEPERNLVPDDTTFSIVVDLLAK 557
              ++L + M      +VP   T+ + +D   K
Sbjct: 421 DDALDLFNNME--TLGVVPTAYTYILFIDFYGK 451



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 60/260 (23%), Positives = 105/260 (40%), Gaps = 44/260 (16%)

Query: 346 ILNVEEAMSLYRQIISNG-VRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLS 404
           IL+  +A S +  +     V  T  T N +L  L    + G    +F+ M+   ++ DL+
Sbjct: 101 ILDPTDAFSYFNSVAEMPFVVHTTETCNHMLEILRIHRRVGDMVVVFNLMQNQIIKRDLN 160

Query: 405 TYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKL 464
           TY I+  GL     +++    F  +    F      +N LI  L ++G    A E++ ++
Sbjct: 161 TYLIIFKGLFIRGGLRQTPFAFGKMREAGFHLNAYSYNGLIHLLLQSGLCREALEMYRRM 220

Query: 465 PQKGLVPT-----------------------------------VVTYSIMIHGLCRKGKL 489
             +GL P+                                   + TY+I I  L R G++
Sbjct: 221 VLEGLKPSLKTFSALMVATGKRRDTETVKSLLEEMESLGLKPNIYTYTICIRVLGRAGRI 280

Query: 490 EKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFS 549
           ++A   +  ME +GC P+VVT+  L+       K    +EL  KM        PD  T+ 
Sbjct: 281 DEACRIMKRMEDDGCGPDVVTYTVLIDALCTAGKLDDAMELFVKMKASSHK--PDRVTYI 338

Query: 550 IVVDLLAKDEKYHECSAVSK 569
            ++D      K+ +C  + +
Sbjct: 339 TMLD------KFSDCGDLGR 352


>gi|356577033|ref|XP_003556634.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Glycine max]
          Length = 757

 Score =  253 bits (647), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 142/449 (31%), Positives = 242/449 (53%), Gaps = 18/449 (4%)

Query: 72  SPPISSFNLLFGAVAK-----NRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERG 126
           +P + S+N +  A+ +     +R YD     +R +V  G+ P+  T N++I       RG
Sbjct: 164 APTVLSYNAVLDALLRRSSSNHRDYDDAERVFRDMVRNGVSPNVYTYNVII-------RG 216

Query: 127 LCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENG 186
           +  +  +++     + M   G+ P+V+TY TLI+  C+   +  A+ L + M  G     
Sbjct: 217 VVSQGDLEKGLGFMRKMEKEGISPNVVTYNTLIDASCKKKKVKEAMALLRAMAVGGV--- 273

Query: 187 LISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEE 246
                N+ SY+ +I+ LC +G + +  EL  EM+G+G+ P  V   TL++GFC  GN  +
Sbjct: 274 ---AANLISYNSVINGLCGKGRMSEVGELVEEMRGKGLVPDEVTYNTLVNGFCKEGNLHQ 330

Query: 247 VNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMD 306
              L  EM+  G  PN++T+  +I+C+CK G ++ A  + + M  RGL P+  TY +L+D
Sbjct: 331 GLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAVEIFDQMRVRGLRPNERTYTTLID 390

Query: 307 GYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQ 366
           G+C  G ++ A ++   M   G   +VV+YN L++GYC +  V+EA+ + R ++  G+  
Sbjct: 391 GFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYCFLGRVQEAVGILRGMVERGLPP 450

Query: 367 TVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLF 426
            V++Y+T+++G  +  + G A ++ +EM    V PD  TY+ LI GLC    + EA  LF
Sbjct: 451 DVVSYSTVIAGFCRERELGKAFQMKEEMVEKGVLPDTVTYSSLIQGLCLQQKLVEAFDLF 510

Query: 427 HMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRK 486
             +           +  LI+  C  G L  A  L  ++ Q+G +P  VTYS++I+GL +K
Sbjct: 511 REMMRRGLPPDEVTYTSLINAYCVDGELSKALRLHDEMVQRGFLPDNVTYSVLINGLNKK 570

Query: 487 GKLEKANDFLLYMEKNGCAPNVVTFNTLM 515
            + + A   LL +      P+ VT+NTL+
Sbjct: 571 ARTKVAKRLLLKLFYEESVPDDVTYNTLI 599



 Score =  228 bits (582), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 156/536 (29%), Positives = 253/536 (47%), Gaps = 30/536 (5%)

Query: 55  NLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLN 114
           + ++A   F  M     SP + ++N++   V      +  + F RK+   G+ P+ +T N
Sbjct: 187 DYDDAERVFRDMVRNGVSPNVYTYNVIIRGVVSQGDLEKGLGFMRKMEKEGISPNVVTYN 246

Query: 115 ILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRL 174
            LI+         C + ++KEA  L + M   GV  ++I+Y ++ING C  G +S    L
Sbjct: 247 TLIDAS-------CKKKKVKEAMALLRAMAVGGVAANLISYNSVINGLCGKGRMSEVGEL 299

Query: 175 HKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTL 234
            ++M       GL+      +Y+ +++  CKEG + +   L  EM G+G++P VV  TTL
Sbjct: 300 VEEMRG----KGLVPDE--VTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTL 353

Query: 235 IHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGL 294
           I+  C AGN      +F +M   G RPN  T+  +ID  C+ G +NEA  +L  MI  G 
Sbjct: 354 INCMCKAGNLSRAVEIFDQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGF 413

Query: 295 NPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMS 354
           +P   TYN+L+ GYC +GR+  A  I   M  +G    VVSY+ +I G+C+   + +A  
Sbjct: 414 SPSVVTYNALVHGYCFLGRVQEAVGILRGMVERGLPPDVVSYSTVIAGFCRERELGKAFQ 473

Query: 355 LYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLC 414
           +  +++  GV    +TY++L+ GL    +   A  LF EM    + PD  TY  LI+  C
Sbjct: 474 MKEEMVEKGVLPDTVTYSSLIQGLCLQQKLVEAFDLFREMMRRGLPPDEVTYTSLINAYC 533

Query: 415 KNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVV 474
            +  + +A++L   +    F      ++ LI+GL K  R   A  L  KL  +  VP  V
Sbjct: 534 VDGELSKALRLHDEMVQRGFLPDNVTYSVLINGLNKKARTKVAKRLLLKLFYEESVPDDV 593

Query: 475 TYSIMIH---------------GLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFL 519
           TY+ +I                G C KG + +A+     M +    PN   +N ++HG  
Sbjct: 594 TYNTLIENCSNNEFKSVEGLVKGFCMKGLMNEADRVFKTMLQRNHKPNAAIYNLMIHGHS 653

Query: 520 QNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKSSYRAC 575
           +     K   L   M     +          +V  LA++    E S + ++  R+C
Sbjct: 654 RGGNVHKAYNLY--MELEHSSFACHTVAVIALVKALAREGMNDELSRLLQNILRSC 707



 Score =  215 bits (548), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 129/419 (30%), Positives = 217/419 (51%), Gaps = 13/419 (3%)

Query: 147 GVRPDVITYGTLINGFCRTG-----NLSVALRLHKKMVSGDYENGLISKTNIFSYSIIID 201
           G  P V++Y  +++   R       +   A R+ + MV     NG+    N+++Y++II 
Sbjct: 162 GFAPTVLSYNAVLDALLRRSSSNHRDYDDAERVFRDMV----RNGV--SPNVYTYNVIIR 215

Query: 202 SLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRP 261
            +  +G ++K      +M+  GI+P VV   TLI   C     +E   L   M   G   
Sbjct: 216 GVVSQGDLEKGLGFMRKMEKEGISPNVVTYNTLIDASCKKKKVKEAMALLRAMAVGGVAA 275

Query: 262 NLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIF 321
           NL+++N +I+ LC  G+++E   L+E M  +GL PD  TYN+L++G+C  G +     + 
Sbjct: 276 NLISYNSVINGLCGKGRMSEVGELVEEMRGKGLVPDEVTYNTLVNGFCKEGNLHQGLVLL 335

Query: 322 LSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQA 381
             M  KG    VV+Y  LIN  CK  N+  A+ ++ Q+   G+R    TY TL+ G  Q 
Sbjct: 336 SEMVGKGLSPNVVTYTTLINCMCKAGNLSRAVEIFDQMRVRGLRPNERTYTTLIDGFCQK 395

Query: 382 GQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIF 441
           G    A K+  EM +    P + TYN L+ G C    VQEAV +   +        +  +
Sbjct: 396 GLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYCFLGRVQEAVGILRGMVERGLPPDVVSY 455

Query: 442 NCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEK 501
           + +I G C+   L  A+++  ++ +KG++P  VTYS +I GLC + KL +A D    M +
Sbjct: 456 STVIAGFCRERELGKAFQMKEEMVEKGVLPDTVTYSSLIQGLCLQQKLVEAFDLFREMMR 515

Query: 502 NGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEK 560
            G  P+ VT+ +L++ +  + + SK + L  +M   +R  +PD+ T+S++++ L K  +
Sbjct: 516 RGLPPDEVTYTSLINAYCVDGELSKALRLHDEMV--QRGFLPDNVTYSVLINGLNKKAR 572



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 96/349 (27%), Positives = 166/349 (47%), Gaps = 30/349 (8%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CK+G  NL+ A   F  M      P   ++  L     +    +       +++  G  P
Sbjct: 358 CKAG--NLSRAVEIFDQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSP 415

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
             +T N L++       G C   R++EA  + + M+  G+ PDV++Y T+I GFCR   L
Sbjct: 416 SVVTYNALVH-------GYCFLGRVQEAVGILRGMVERGLPPDVVSYSTVIAGFCREREL 468

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
             A ++ ++MV    E G++  T   +YS +I  LC +  + +A +LF EM  RG+ P  
Sbjct: 469 GKAFQMKEEMV----EKGVLPDT--VTYSSLIQGLCLQQKLVEAFDLFREMMRRGLPPDE 522

Query: 229 VVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLEL 288
           V  T+LI+ +C  G   +   L  EM+  G  P+ +T++V+I+ L K  +   A  LL  
Sbjct: 523 VTYTSLINAYCVDGELSKALRLHDEMVQRGFLPDNVTYSVLINGLNKKARTKVAKRLLLK 582

Query: 289 MIQRGLNPDRFTYNSLMD---------------GYCLVGRIDTAREIFLSMHSKGCKHTV 333
           +      PD  TYN+L++               G+C+ G ++ A  +F +M  +  K   
Sbjct: 583 LFYEESVPDDVTYNTLIENCSNNEFKSVEGLVKGFCMKGLMNEADRVFKTMLQRNHKPNA 642

Query: 334 VSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAG 382
             YN++I+G+ +  NV +A +LY ++  +      +    L+  L + G
Sbjct: 643 AIYNLMIHGHSRGGNVHKAYNLYMELEHSSFACHTVAVIALVKALAREG 691



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 69/258 (26%), Positives = 124/258 (48%), Gaps = 42/258 (16%)

Query: 336 YNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGY-----AQKL 390
           +++++    ++  V +A++L      +G   TV++YN +L  L +   + +     A+++
Sbjct: 135 FDLVVKSLSRLGFVPKALTLLHLANRHGFAPTVLSYNAVLDALLRRSSSNHRDYDDAERV 194

Query: 391 FDEM---------KLYNV--------------------------EPDLSTYNILIDGLCK 415
           F +M           YNV                           P++ TYN LID  CK
Sbjct: 195 FRDMVRNGVSPNVYTYNVIIRGVVSQGDLEKGLGFMRKMEKEGISPNVVTYNTLIDASCK 254

Query: 416 NNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVT 475
              V+EA+ L   + +      +  +N +I+GLC  GR+    EL  ++  KGLVP  VT
Sbjct: 255 KKKVKEAMALLRAMAVGGVAANLISYNSVINGLCGKGRMSEVGELVEEMRGKGLVPDEVT 314

Query: 476 YSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMA 535
           Y+ +++G C++G L +    L  M   G +PNVVT+ TL++   +    S+ VE+  +M 
Sbjct: 315 YNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAVEIFDQMR 374

Query: 536 EPERNLVPDDTTFSIVVD 553
              R L P++ T++ ++D
Sbjct: 375 --VRGLRPNERTYTTLID 390



 Score = 58.9 bits (141), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 33/136 (24%), Positives = 66/136 (48%), Gaps = 7/136 (5%)

Query: 440 IFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGK-----LEKAND 494
           +F+ ++  L + G +  A  L H   + G  PTV++Y+ ++  L R+        + A  
Sbjct: 134 VFDLVVKSLSRLGFVPKALTLLHLANRHGFAPTVLSYNAVLDALLRRSSSNHRDYDDAER 193

Query: 495 FLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDL 554
               M +NG +PNV T+N ++ G +      K +  + KM   +  + P+  T++ ++D 
Sbjct: 194 VFRDMVRNGVSPNVYTYNVIIRGVVSQGDLEKGLGFMRKME--KEGISPNVVTYNTLIDA 251

Query: 555 LAKDEKYHECSAVSKS 570
             K +K  E  A+ ++
Sbjct: 252 SCKKKKVKEAMALLRA 267


>gi|225456753|ref|XP_002268934.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g74580 [Vitis vinifera]
 gi|297733985|emb|CBI15232.3| unnamed protein product [Vitis vinifera]
          Length = 764

 Score =  253 bits (647), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 159/501 (31%), Positives = 254/501 (50%), Gaps = 24/501 (4%)

Query: 56  LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNI 115
           + EA   F  M      P + S+N +   + + R++D     Y ++   G++PD  T  I
Sbjct: 92  IQEAVDVFERMDFFNCEPSVQSYNAIMNILVEYRYFDQAHKVYMRMRDKGIVPDVYTFTI 151

Query: 116 LINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLH 175
            +  F       C  +R   A  L  NM + G     + Y T+I GF    +   A  L 
Sbjct: 152 RMKSF-------CRTSRPHAARRLLNNMPSQGCESSAVAYCTVIGGFYEENHRVEAHELF 204

Query: 176 KKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLI 235
           ++M+      GL    +I +++ +I +LC++G V +++ L  ++  RG++P +      I
Sbjct: 205 EEML------GLGICPDIMAFNKLIHTLCRKGHVQESERLLNKVLKRGVSPNLFTVNIFI 258

Query: 236 HGFCCAGNWEEVNGLFIEMLD---LGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQR 292
            GFC      E     I +LD    G  P+++T+N +I  LCK  K+ EA   L  M+  
Sbjct: 259 QGFCQRAMLNEA----IRLLDGVGRGLTPDVITYNTLICGLCKNFKVVEAEHYLRKMVNE 314

Query: 293 GLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEA 352
           G  PD FTYNS++DGYC +G +  A +I      KG      +Y  LING C+  +++ A
Sbjct: 315 GYEPDGFTYNSIIDGYCKLGMMQNADQILRDGAFKGFVPDESTYCSLINGLCQDGDIDRA 374

Query: 353 MSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDG 412
           ++++ + +  G++  ++  NTL+ GL Q G    A KL +EM      PD+ TYN++I+G
Sbjct: 375 INVFNEAMEKGLKPNLVLCNTLVKGLSQQGLILQALKLMNEMSENGCSPDIWTYNLVING 434

Query: 413 LCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPT 472
           LCK  CV +A  L            +  FN LIDG CK  +LDNA E+  ++   G+ P 
Sbjct: 435 LCKIGCVSDADNLVIDAIAKGHLPDVFTFNTLIDGYCKKLKLDNAIEIVDRMWNHGVSPD 494

Query: 473 VVTYSIMIHGLCRKGKLEKA-NDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELL 531
           V+TY+ +++GLC+ GK E     F L MEK GC PN++T+N L   F +  K  + + L+
Sbjct: 495 VITYNSILNGLCKAGKYEDVMGTFKLMMEK-GCVPNIITYNILTESFCKARKVEEALNLI 553

Query: 532 HKMAEPERNLVPDDTTFSIVV 552
            +M    + L PD   F  ++
Sbjct: 554 EEMQ--NKGLTPDVVNFGTLM 572



 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 154/511 (30%), Positives = 254/511 (49%), Gaps = 17/511 (3%)

Query: 58  EARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILI 117
           EA   F  M  +   P I +FN L   + +  H         K++  G+ P+  T+NI I
Sbjct: 199 EAHELFEEMLGLGICPDIMAFNKLIHTLCRKGHVQESERLLNKVLKRGVSPNLFTVNIFI 258

Query: 118 NCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKK 177
                  +G C    + EA  L    +  G+ PDVITY TLI G C+   +  A    +K
Sbjct: 259 -------QGFCQRAMLNEAIRLLDG-VGRGLTPDVITYNTLICGLCKNFKVVEAEHYLRK 310

Query: 178 MVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHG 237
           MV+  YE       + F+Y+ IID  CK G++  A ++  +   +G  P      +LI+G
Sbjct: 311 MVNEGYE------PDGFTYNSIIDGYCKLGMMQNADQILRDGAFKGFVPDESTYCSLING 364

Query: 238 FCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPD 297
            C  G+ +    +F E ++ G +PNL+  N ++  L + G I +A  L+  M + G +PD
Sbjct: 365 LCQDGDIDRAINVFNEAMEKGLKPNLVLCNTLVKGLSQQGLILQALKLMNEMSENGCSPD 424

Query: 298 RFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYR 357
            +TYN +++G C +G +  A  + +   +KG    V ++N LI+GYCK L ++ A+ +  
Sbjct: 425 IWTYNLVINGLCKIGCVSDADNLVIDAIAKGHLPDVFTFNTLIDGYCKKLKLDNAIEIVD 484

Query: 358 QIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNN 417
           ++ ++GV   VITYN++L+GL +AG+       F  M      P++ TYNIL +  CK  
Sbjct: 485 RMWNHGVSPDVITYNSILNGLCKAGKYEDVMGTFKLMMEKGCVPNIITYNILTESFCKAR 544

Query: 418 CVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKL-PQKGLVPTVVTY 476
            V+EA+ L   ++       +  F  L+ G C  G LD A++LF ++  Q     T+ TY
Sbjct: 545 KVEEALNLIEEMQNKGLTPDVVNFGTLMKGFCDNGDLDGAYQLFKRVDEQYKFSHTIATY 604

Query: 477 SIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAE 536
           +IMI+    K  +  A      M +NG +P+  T+  ++ GF +    +     L  + +
Sbjct: 605 NIMINAFAGKLNMNMAEKLFNKMCENGFSPDSYTYRVMIDGFCKTGNINSGYSFL--LVK 662

Query: 537 PERNLVPDDTTFSIVVDLLAKDEKYHECSAV 567
            E+ L+P  TTF  V++ L    + HE   +
Sbjct: 663 IEKGLIPSLTTFGRVLNCLCLKRRVHEAVGI 693



 Score =  209 bits (531), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 132/458 (28%), Positives = 231/458 (50%), Gaps = 16/458 (3%)

Query: 72  SPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVEN 131
           +P + ++N L   + KN        + RK+V+ G  PD  T N +I+       G C   
Sbjct: 282 TPDVITYNTLICGLCKNFKVVEAEHYLRKMVNEGYEPDGFTYNSIID-------GYCKLG 334

Query: 132 RIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKT 191
            ++ A  + ++    G  PD  TY +LING C+ G++  A+ +  + +    E GL  K 
Sbjct: 335 MMQNADQILRDGAFKGFVPDESTYCSLINGLCQDGDIDRAINVFNEAM----EKGL--KP 388

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
           N+   + ++  L ++GL+ +A +L  EM   G +P +     +I+G C  G   + + L 
Sbjct: 389 NLVLCNTLVKGLSQQGLILQALKLMNEMSENGCSPDIWTYNLVINGLCKIGCVSDADNLV 448

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
           I+ +  G  P++ TFN +ID  CK  K++ A  +++ M   G++PD  TYNS+++G C  
Sbjct: 449 IDAIAKGHLPDVFTFNTLIDGYCKKLKLDNAIEIVDRMWNHGVSPDVITYNSILNGLCKA 508

Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
           G+ +     F  M  KGC   +++YNIL   +CK   VEEA++L  ++ + G+   V+ +
Sbjct: 509 GKYEDVMGTFKLMMEKGCVPNIITYNILTESFCKARKVEEALNLIEEMQNKGLTPDVVNF 568

Query: 372 NTLLSGLFQAGQAGYAQKLFDEM-KLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLE 430
            TL+ G    G    A +LF  + + Y     ++TYNI+I+       +  A KLF+ + 
Sbjct: 569 GTLMKGFCDNGDLDGAYQLFKRVDEQYKFSHTIATYNIMINAFAGKLNMNMAEKLFNKMC 628

Query: 431 MNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLE 490
            N F      +  +IDG CK G +++ +       +KGL+P++ T+  +++ LC K ++ 
Sbjct: 629 ENGFSPDSYTYRVMIDGFCKTGNINSGYSFLLVKIEKGLIPSLTTFGRVLNCLCLKRRVH 688

Query: 491 KANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVV 528
           +A   +  M   G  P VV  NT+     +     K+V
Sbjct: 689 EAVGIIHLMVHKGIVPEVV--NTIFEADKKEVAAPKIV 724



 Score =  138 bits (348), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 105/406 (25%), Positives = 194/406 (47%), Gaps = 43/406 (10%)

Query: 190 KTNIFSYSIIIDSLCKEGLVDKAKELFLEMK---GRGINPAVVVCTTLIHGFCCAGNWEE 246
           K  + +Y  +I+ L   G  +  +E+  E +     G+   V +     +G    G  +E
Sbjct: 37  KHTLLTYKGMIEKLGFHGEFEAMEEVLAETRMNIDNGLLEGVYIGAMRNYGR--KGKIQE 94

Query: 247 VNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMD 306
              +F  M      P++ ++N +++ L +    ++A+ +   M  +G+ PD +T+   M 
Sbjct: 95  AVDVFERMDFFNCEPSVQSYNAIMNILVEYRYFDQAHKVYMRMRDKGIVPDVYTFTIRMK 154

Query: 307 GYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQ 366
            +C   R   AR +  +M S+GC+ + V+Y  +I G+ +  +  EA  L+ +++  G+  
Sbjct: 155 SFCRTSRPHAARRLLNNMPSQGCESSAVAYCTVIGGFYEENHRVEAHELFEEMLGLGICP 214

Query: 367 TVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKL- 425
            ++ +N L+  L + G    +++L +++    V P+L T NI I G C+   + EA++L 
Sbjct: 215 DIMAFNKLIHTLCRKGHVQESERLLNKVLKRGVSPNLFTVNIFIQGFCQRAMLNEAIRLL 274

Query: 426 ------------------------FHMLEMNKF-----EFGIE----IFNCLIDGLCKAG 452
                                   F ++E   +       G E     +N +IDG CK G
Sbjct: 275 DGVGRGLTPDVITYNTLICGLCKNFKVVEAEHYLRKMVNEGYEPDGFTYNSIIDGYCKLG 334

Query: 453 RLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKA-NDFLLYMEKNGCAPNVVTF 511
            + NA ++      KG VP   TY  +I+GLC+ G +++A N F   MEK G  PN+V  
Sbjct: 335 MMQNADQILRDGAFKGFVPDESTYCSLINGLCQDGDIDRAINVFNEAMEK-GLKPNLVLC 393

Query: 512 NTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAK 557
           NTL+ G  Q     + ++L+++M+  E    PD  T+++V++ L K
Sbjct: 394 NTLVKGLSQQGLILQALKLMNEMS--ENGCSPDIWTYNLVINGLCK 437



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 74/257 (28%), Positives = 133/257 (51%), Gaps = 14/257 (5%)

Query: 41  LNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRK 100
            N  +   CK   + L+ A      M +   SP + ++N +   + K   Y+ V+  ++ 
Sbjct: 463 FNTLIDGYCKK--LKLDNAIEIVDRMWNHGVSPDVITYNSILNGLCKAGKYEDVMGTFKL 520

Query: 101 LVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLIN 160
           ++  G +P+ +T NIL   F       C   +++EA  L + M   G+ PDV+ +GTL+ 
Sbjct: 521 MMEKGCVPNIITYNILTESF-------CKARKVEEALNLIEEMQNKGLTPDVVNFGTLMK 573

Query: 161 GFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMK 220
           GFC  G+L  A +L K+ V   Y+    S T I +Y+I+I++   +  ++ A++LF +M 
Sbjct: 574 GFCDNGDLDGAYQLFKR-VDEQYK---FSHT-IATYNIMINAFAGKLNMNMAEKLFNKMC 628

Query: 221 GRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKIN 280
             G +P       +I GFC  GN        +  ++ G  P+L TF  +++CLC   +++
Sbjct: 629 ENGFSPDSYTYRVMIDGFCKTGNINSGYSFLLVKIEKGLIPSLTTFGRVLNCLCLKRRVH 688

Query: 281 EANGLLELMIQRGLNPD 297
           EA G++ LM+ +G+ P+
Sbjct: 689 EAVGIIHLMVHKGIVPE 705


>gi|359475765|ref|XP_002273555.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Vitis vinifera]
          Length = 935

 Score =  253 bits (647), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 175/566 (30%), Positives = 274/566 (48%), Gaps = 51/566 (9%)

Query: 56  LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNI 115
           +NEA+  F  M      P  ++ + L     +    D V+     +VS G+  + +T N+
Sbjct: 225 MNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNV 284

Query: 116 LINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLH 175
           LI+       GLC   ++++A  + K MI  G +P+  T+  LI G+CR  N+  AL L 
Sbjct: 285 LIH-------GLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRALELL 337

Query: 176 KKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLI 235
            +M   +  N + S     SY  +I+ LC    +  A +L  +M   G+ P VVV +TLI
Sbjct: 338 DEM---EKRNLVPSAV---SYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLI 391

Query: 236 HGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLN 295
            G+   G  EE   L   M   G  P++  +N +I CL K GK+ EA+  L  +  RGL 
Sbjct: 392 MGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLK 451

Query: 296 PDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSL 355
           PD  T+ + + GY   G++  A + F  M   G       Y +LING+ K  N+ EA+S+
Sbjct: 452 PDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSI 511

Query: 356 YRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCK 415
           +R + + GV   V T +  + GL + G+   A K+F E+K   + PD+ TY+ LI G CK
Sbjct: 512 FRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCK 571

Query: 416 NNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVT 475
              V++A +L   + +      I I+N L+DGLCK+G +  A +LF  +P+KGL P  VT
Sbjct: 572 QGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVT 631

Query: 476 YSIMI-----------------------------------HGLCRKGKLEKANDFLLYME 500
           YS MI                                   HG C++G +EKA +    M 
Sbjct: 632 YSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREML 691

Query: 501 KNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEK 560
           + G A   ++FNTL+ G+ ++ K  +  +L  +M    + ++PD  T++ V+D   K  K
Sbjct: 692 QKGFA-TTLSFNTLIDGYCKSCKIQEASQLFQEMI--AKQIMPDHVTYTTVIDWHCKAGK 748

Query: 561 YHECSAVSKSSYRACLYVTIFQPSSL 586
             E + + K      L V     +SL
Sbjct: 749 MEEANLLFKEMQERNLIVDTVTYTSL 774



 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 148/465 (31%), Positives = 228/465 (49%), Gaps = 15/465 (3%)

Query: 99  RKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTL 158
           R +   GL+P+  T  I+         GLC   R+ EA   F+ M   G++PD      L
Sbjct: 198 RSMGEKGLVPNTYTYTIIT-------AGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSAL 250

Query: 159 INGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLE 218
           I+GF R G++   LR+   MVS           N+ +Y+++I  LCK G ++KA E+   
Sbjct: 251 IDGFMREGDIDEVLRIKDVMVSCGI------PINLITYNVLIHGLCKFGKMEKAAEILKG 304

Query: 219 MKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGK 278
           M   G  P       LI G+C   N      L  EM      P+ +++  MI+ LC    
Sbjct: 305 MITLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKD 364

Query: 279 INEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNI 338
           ++ AN LLE M   GL P+   Y++L+ GY   GRI+ AR +   M   G    +  YN 
Sbjct: 365 LSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNA 424

Query: 339 LINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYN 398
           +I+   K   +EEA +   +I   G++   +T+   + G  + G+   A K FDEM  + 
Sbjct: 425 IISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHG 484

Query: 399 VEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAW 458
           + P+   Y +LI+G  K   + EA+ +F  L        ++  +  I GL K GR+  A 
Sbjct: 485 LMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEAL 544

Query: 459 ELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGF 518
           ++F +L +KGLVP V TYS +I G C++G++EKA +    M   G APN+  +N L+ G 
Sbjct: 545 KVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGL 604

Query: 519 LQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
            ++    +  +L   M  PE+ L PD  T+S ++D   K E   E
Sbjct: 605 CKSGDIQRARKLFDGM--PEKGLEPDSVTYSTMIDGYCKSENVAE 647



 Score =  218 bits (554), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 152/533 (28%), Positives = 250/533 (46%), Gaps = 51/533 (9%)

Query: 56  LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNI 115
           + EAR     M+    +P I  +N +   ++K    +   ++  ++   GL PD +T   
Sbjct: 400 IEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGA 459

Query: 116 LINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLH 175
            I   G  + G     ++ EA   F  M+  G+ P+   Y  LING  + GNL  AL + 
Sbjct: 460 FI--LGYSKTG-----KMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIF 512

Query: 176 KKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLI 235
           + +      + L    ++ + S  I  L K G V +A ++F E+K +G+ P V   ++LI
Sbjct: 513 RHL------HALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLI 566

Query: 236 HGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLN 295
            GFC  G  E+   L  EM   G  PN+  +N ++D LCK G I  A  L + M ++GL 
Sbjct: 567 SGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLE 626

Query: 296 PDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSL 355
           PD  TY++++DGYC    +  A  +F  M SKG +     YN L++G CK  ++E+AM+L
Sbjct: 627 PDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNL 686

Query: 356 YRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCK 415
           +R+++  G   T +++NTL+ G  ++ +   A +LF EM    + PD  TY  +ID  CK
Sbjct: 687 FREMLQKGF-ATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCK 745

Query: 416 NNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVT 475
              ++EA  LF  ++          +  L+ G  K G+    + LF K+  KG+ P  VT
Sbjct: 746 AGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVT 805

Query: 476 YSIMIH-----------------------------------GLCRKGKLEKANDFLLYME 500
           Y ++I+                                    LC++  L +A+  L  M 
Sbjct: 806 YGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMG 865

Query: 501 KNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
           + G  P++   +TL+  F +  K  +   +   +      LVPD TT   +V+
Sbjct: 866 ELGLKPSLAACSTLVRSFHEAGKMDEATRVFEGVK--SLGLVPDTTTLIDLVN 916



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 137/476 (28%), Positives = 227/476 (47%), Gaps = 56/476 (11%)

Query: 59  ARYFFGYMTH-MQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILI 117
           A+YF   + H + P+ P+  + +L     K  +    +S +R L ++G+LPD  T +  I
Sbjct: 474 AKYFDEMLDHGLMPNNPL--YTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFI 531

Query: 118 NCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKK 177
           +       GL    R++EA  +F  +   G+ PDV TY +LI+GFC+ G +  A  LH +
Sbjct: 532 H-------GLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDE 584

Query: 178 MVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHG 237
           M       G+    NIF Y+ ++D LCK G + +A++LF  M  +G+ P  V  +T+I G
Sbjct: 585 MCL----KGI--APNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDG 638

Query: 238 FCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPD 297
           +C + N  E   LF EM   G +P+   +N ++   CK G + +A  L   M+Q+G    
Sbjct: 639 YCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGF-AT 697

Query: 298 RFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYR 357
             ++N+L+DGYC   +I  A ++F  M +K      V+Y  +I+ +CK   +EEA  L++
Sbjct: 698 TLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFK 757

Query: 358 QIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTY----------- 406
           ++    +    +TY +L+ G  + GQ+     LF++M    V+PD  TY           
Sbjct: 758 EMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKED 817

Query: 407 ------------------------NILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFN 442
                                   ++LI  LCK   + EA KL    EM +      +  
Sbjct: 818 NLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLD--EMGELGLKPSLAA 875

Query: 443 C--LIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFL 496
           C  L+    +AG++D A  +F  +   GLVP   T   +++G       E A + +
Sbjct: 876 CSTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVNGNLNDTDSEDARNLI 931



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 96/358 (26%), Positives = 180/358 (50%), Gaps = 19/358 (5%)

Query: 196 YSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEML 255
           + I+IDS  + G++D+A  +F   K   I  +++ C +L                   M 
Sbjct: 159 FDILIDSYKRMGMLDEAANVFFVAKNDSILISLIRCNSLR-----------------SMG 201

Query: 256 DLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRID 315
           + G  PN  T+ ++   LC+  ++NEA    E M + GL PD    ++L+DG+   G ID
Sbjct: 202 EKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDID 261

Query: 316 TAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLL 375
               I   M S G    +++YN+LI+G CK   +E+A  + + +I+ G +    T+  L+
Sbjct: 262 EVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLI 321

Query: 376 SGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFE 435
            G  +    G A +L DEM+  N+ P   +Y  +I+GLC    +  A KL   +  +  +
Sbjct: 322 EGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLK 381

Query: 436 FGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDF 495
             + +++ LI G    GR++ A  L   +   G+ P +  Y+ +I  L + GK+E+A+ +
Sbjct: 382 PNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTY 441

Query: 496 LLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
           LL ++  G  P+ VTF   + G+ +  K ++  +   +M   +  L+P++  ++++++
Sbjct: 442 LLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEML--DHGLMPNNPLYTVLIN 497



 Score =  108 bits (270), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 83/347 (23%), Positives = 157/347 (45%), Gaps = 51/347 (14%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CKSG  ++  AR  F  M      P   +++ +     K+ +     S + ++ S G+ P
Sbjct: 605 CKSG--DIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQP 662

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
                N L++       G C E  +++A  LF+ M+  G     +++ TLI+G+C++  +
Sbjct: 663 HSFVYNALVH-------GCCKEGDMEKAMNLFREMLQKGF-ATTLSFNTLIDGYCKSCKI 714

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
             A +L ++M++           +  +Y+ +ID  CK G +++A  LF EM+ R +    
Sbjct: 715 QEASQLFQEMIAKQI------MPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDT 768

Query: 229 VVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTF---------------------- 266
           V  T+L++G+   G   EV  LF +M+  G +P+ +T+                      
Sbjct: 769 VTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDE 828

Query: 267 -------------NVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGR 313
                        +++I  LCK   + EA+ LL+ M + GL P     ++L+  +   G+
Sbjct: 829 VVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGK 888

Query: 314 IDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQII 360
           +D A  +F  + S G      +   L+NG     + E+A +L +Q++
Sbjct: 889 MDEATRVFEGVKSLGLVPDTTTLIDLVNGNLNDTDSEDARNLIKQLV 935



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 78/296 (26%), Positives = 142/296 (47%), Gaps = 38/296 (12%)

Query: 261 PNLL-TFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTARE 319
           P  L +F+++   LC       ANG+L  MI+    P  ++ +S++D             
Sbjct: 101 PQFLDSFSILAVQLCNSELFGLANGVLTQMIR---TP--YSSSSILDS------------ 143

Query: 320 IFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLF 379
           +     + G    VV ++ILI+ Y ++  ++EA +++    ++ +  ++I  N+L S   
Sbjct: 144 VLFWFRNYGGSSPVV-FDILIDSYKRMGMLDEAANVFFVAKNDSILISLIRCNSLRS--- 199

Query: 380 QAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIE 439
             G+ G               P+  TY I+  GLC+   + EA   F  ++    +    
Sbjct: 200 -MGEKGLV-------------PNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYN 245

Query: 440 IFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYM 499
             + LIDG  + G +D    +   +   G+   ++TY+++IHGLC+ GK+EKA + L  M
Sbjct: 246 ACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGM 305

Query: 500 EKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLL 555
              GC PN  TF  L+ G+ + +   + +ELL +M   +RNLVP   ++  +++ L
Sbjct: 306 ITLGCKPNSRTFCLLIEGYCREHNMGRALELLDEME--KRNLVPSAVSYGAMINGL 359


>gi|296087509|emb|CBI34098.3| unnamed protein product [Vitis vinifera]
          Length = 718

 Score =  253 bits (645), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 174/562 (30%), Positives = 274/562 (48%), Gaps = 52/562 (9%)

Query: 56  LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNI 115
           +NEA+  F  M      P  ++ + L     +    D V+     +VS G+  + +T N+
Sbjct: 26  MNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNV 85

Query: 116 LINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLH 175
           LI+       GLC   ++++A  + K MI  G +P+  T+  LI G+CR  N+  AL L 
Sbjct: 86  LIH-------GLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRALELL 138

Query: 176 KKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLI 235
            +M     +  L+   +  SY  +I+ LC    +  A +L  +M   G+ P VVV +TLI
Sbjct: 139 DEM----EKRNLVP--SAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLI 192

Query: 236 HGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLN 295
            G+   G  EE   L   M   G  P++  +N +I CL K GK+ EA+  L  +  RGL 
Sbjct: 193 MGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLK 252

Query: 296 PDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSL 355
           PD  T+ + + GY   G++  A + F  M   G       Y +LING+ K  N+ EA+S+
Sbjct: 253 PDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSI 312

Query: 356 YRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCK 415
           +R + + GV   V T +  + GL + G+   A K+F E+K   + PD+ TY+ LI G CK
Sbjct: 313 FRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCK 372

Query: 416 NNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVT 475
              V++A +L   + +      I I+N L+DGLCK+G +  A +LF  +P+KGL P  VT
Sbjct: 373 QGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVT 432

Query: 476 YSIMI-----------------------------------HGLCRKGKLEKANDFLLYME 500
           YS MI                                   HG C++G +EKA +    M 
Sbjct: 433 YSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREML 492

Query: 501 KNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEK 560
           + G A   ++FNTL+ G+ ++ K  +  +L  +M    + ++PD  T++ V+D   K  K
Sbjct: 493 QKGFA-TTLSFNTLIDGYCKSCKIQEASQLFQEMI--AKQIMPDHVTYTTVIDWHCKAGK 549

Query: 561 YHECSAVSKSSYRACLYV-TIF 581
             E + + K      L V T+F
Sbjct: 550 MEEANLLFKEMQERNLIVDTVF 571



 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 147/459 (32%), Positives = 226/459 (49%), Gaps = 15/459 (3%)

Query: 105 GLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCR 164
           GL+P+  T  I+         GLC   R+ EA   F+ M   G++PD      LI+GF R
Sbjct: 5   GLVPNTYTYTIIT-------AGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMR 57

Query: 165 TGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGI 224
            G++   LR+   MVS           N+ +Y+++I  LCK G ++KA E+   M   G 
Sbjct: 58  EGDIDEVLRIKDVMVSCGI------PINLITYNVLIHGLCKFGKMEKAAEILKGMITLGC 111

Query: 225 NPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANG 284
            P       LI G+C   N      L  EM      P+ +++  MI+ LC    ++ AN 
Sbjct: 112 KPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANK 171

Query: 285 LLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYC 344
           LLE M   GL P+   Y++L+ GY   GRI+ AR +   M   G    +  YN +I+   
Sbjct: 172 LLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLS 231

Query: 345 KILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLS 404
           K   +EEA +   +I   G++   +T+   + G  + G+   A K FDEM  + + P+  
Sbjct: 232 KAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNP 291

Query: 405 TYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKL 464
            Y +LI+G  K   + EA+ +F  L        ++  +  I GL K GR+  A ++F +L
Sbjct: 292 LYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSEL 351

Query: 465 PQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKT 524
            +KGLVP V TYS +I G C++G++EKA +    M   G APN+  +N L+ G  ++   
Sbjct: 352 KEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDI 411

Query: 525 SKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
            +  +L   M  PE+ L PD  T+S ++D   K E   E
Sbjct: 412 QRARKLFDGM--PEKGLEPDSVTYSTMIDGYCKSENVAE 448



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 152/515 (29%), Positives = 251/515 (48%), Gaps = 33/515 (6%)

Query: 56  LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNI 115
           + EAR     M+    +P I  +N +   ++K    +   ++  ++   GL PD +T   
Sbjct: 201 IEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGA 260

Query: 116 LINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLH 175
            I   G  + G     ++ EA   F  M+  G+ P+   Y  LING  + GNL  AL + 
Sbjct: 261 FI--LGYSKTG-----KMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIF 313

Query: 176 KKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLI 235
           + +      + L    ++ + S  I  L K G V +A ++F E+K +G+ P V   ++LI
Sbjct: 314 RHL------HALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLI 367

Query: 236 HGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLN 295
            GFC  G  E+   L  EM   G  PN+  +N ++D LCK G I  A  L + M ++GL 
Sbjct: 368 SGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLE 427

Query: 296 PDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSL 355
           PD  TY++++DGYC    +  A  +F  M SKG +     YN L++G CK  ++E+AM+L
Sbjct: 428 PDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNL 487

Query: 356 YRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCK 415
           +R+++  G   T +++NTL+ G  ++ +   A +LF EM    + PD  TY  +ID  CK
Sbjct: 488 FREMLQKGF-ATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCK 546

Query: 416 NNCVQEAVKLF-HMLEMNK--------FEFGIE--------IFNCLIDGLCKAGRLDNAW 458
              ++EA  LF  M E N         FE  +          +  +I   CK   L  A+
Sbjct: 547 AGKMEEANLLFKEMQERNLIVDTVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAF 606

Query: 459 ELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGF 518
           +L  ++  KG++     + ++I  LC++  L +A+  L  M + G  P++   +TL+  F
Sbjct: 607 KLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSF 666

Query: 519 LQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
            +  K  +   +   +      LVPD TT   +V+
Sbjct: 667 HEAGKMDEATRVFEGV--KSLGLVPDTTTLIDLVN 699



 Score =  211 bits (537), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 157/577 (27%), Positives = 256/577 (44%), Gaps = 68/577 (11%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
           N  +H  CK G   + +A      M  +   P   +F LL     +  +    +    ++
Sbjct: 84  NVLIHGLCKFG--KMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRALELLDEM 141

Query: 102 VSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLING 161
               L+P  ++   +IN       GLC    +  A  L + M   G++P+V+ Y TLI G
Sbjct: 142 EKRNLVPSAVSYGAMIN-------GLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMG 194

Query: 162 FCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKG 221
           +   G +  A RL   M             +IF Y+ II  L K G +++A    LE++G
Sbjct: 195 YASEGRIEEARRLLDGMSCSGV------APDIFCYNAIISCLSKAGKMEEASTYLLEIQG 248

Query: 222 RGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINE 281
           RG+ P  V     I G+   G   E    F EMLD G  PN   + V+I+   K G + E
Sbjct: 249 RGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLME 308

Query: 282 ANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILIN 341
           A  +   +   G+ PD  T ++ + G    GR+  A ++F  +  KG    V +Y+ LI+
Sbjct: 309 ALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLIS 368

Query: 342 GYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEP 401
           G+CK   VE+A  L+ ++   G+   +  YN L+ GL ++G    A+KLFD M    +EP
Sbjct: 369 GFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEP 428

Query: 402 DLSTYNILIDGLCKNNCVQEAVKLFHML-------------------------------- 429
           D  TY+ +IDG CK+  V EA  LFH +                                
Sbjct: 429 DSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLF 488

Query: 430 -EMNKFEFGIEI-FNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKG 487
            EM +  F   + FN LIDG CK+ ++  A +LF ++  K ++P  VTY+ +I   C+ G
Sbjct: 489 REMLQKGFATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAG 548

Query: 488 KLEKANDFLLYMEK-----------------NGCAPNVVTFNTLMHGFLQNNKTSKVVEL 530
           K+E+AN     M++                  G  P+ VT+  +++   + +   +  +L
Sbjct: 549 KMEEANLLFKEMQERNLIVDTVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKL 608

Query: 531 LHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAV 567
             ++    + ++   T   +++  L K E   E S +
Sbjct: 609 RDEVV--GKGMLTKGTIHDLLITALCKREDLTEASKL 643



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 130/444 (29%), Positives = 220/444 (49%), Gaps = 38/444 (8%)

Query: 59  ARYFFGYMTH-MQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILI 117
           A+YF   + H + P+ P+  + +L     K  +    +S +R L ++G+LPD  T +  I
Sbjct: 275 AKYFDEMLDHGLMPNNPL--YTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFI 332

Query: 118 NCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKK 177
           +       GL    R++EA  +F  +   G+ PDV TY +LI+GFC+ G +  A  LH +
Sbjct: 333 H-------GLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDE 385

Query: 178 MVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHG 237
           M       G+    NIF Y+ ++D LCK G + +A++LF  M  +G+ P  V  +T+I G
Sbjct: 386 MCL----KGIAP--NIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDG 439

Query: 238 FCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPD 297
           +C + N  E   LF EM   G +P+   +N ++   CK G + +A  L   M+Q+G    
Sbjct: 440 YCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGF-AT 498

Query: 298 RFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEA----- 352
             ++N+L+DGYC   +I  A ++F  M +K      V+Y  +I+ +CK   +EEA     
Sbjct: 499 TLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFK 558

Query: 353 ------------MSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVE 400
                        +L+ ++++ GV+   +TY  ++    +      A KL DE+    + 
Sbjct: 559 EMQERNLIVDTVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGML 618

Query: 401 PDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNC--LIDGLCKAGRLDNAW 458
              + +++LI  LCK   + EA KL    EM +      +  C  L+    +AG++D A 
Sbjct: 619 TKGTIHDLLITALCKREDLTEASKLLD--EMGELGLKPSLAACSTLVRSFHEAGKMDEAT 676

Query: 459 ELFHKLPQKGLVPTVVTYSIMIHG 482
            +F  +   GLVP   T   +++G
Sbjct: 677 RVFEGVKSLGLVPDTTTLIDLVNG 700



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 112/369 (30%), Positives = 192/369 (52%), Gaps = 4/369 (1%)

Query: 184 ENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGN 243
           E GL+   N ++Y+II   LC+   +++AK  F EM+  G+ P    C+ LI GF   G+
Sbjct: 3   EKGLVP--NTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGD 60

Query: 244 WEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNS 303
            +EV  +   M+  G   NL+T+NV+I  LCK GK+ +A  +L+ MI  G  P+  T+  
Sbjct: 61  IDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCL 120

Query: 304 LMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNG 363
           L++GYC    +  A E+   M  +    + VSY  +ING C   ++  A  L  ++  +G
Sbjct: 121 LIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSG 180

Query: 364 VRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAV 423
           ++  V+ Y+TL+ G    G+   A++L D M    V PD+  YN +I  L K   ++EA 
Sbjct: 181 LKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEAS 240

Query: 424 KLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGL 483
                ++    +     F   I G  K G++  A + F ++   GL+P    Y+++I+G 
Sbjct: 241 TYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGH 300

Query: 484 CRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVP 543
            + G L +A     ++   G  P+V T +  +HG L+N +  + +++  ++   E+ LVP
Sbjct: 301 FKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSEL--KEKGLVP 358

Query: 544 DDTTFSIVV 552
           D  T+S ++
Sbjct: 359 DVFTYSSLI 367



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 108/424 (25%), Positives = 196/424 (46%), Gaps = 34/424 (8%)

Query: 23  SLFKSPRQIAAVSSPETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLF 82
           S+F+    +  +   +T  + F+H   K+G   + EA   F  +      P + +++ L 
Sbjct: 311 SIFRHLHALGVLPDVQT-CSAFIHGLLKNG--RVQEALKVFSELKEKGLVPDVFTYSSLI 367

Query: 83  GAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKN 142
               K    +     + ++   G+ P+    N L++       GLC    I+ A  LF  
Sbjct: 368 SGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVD-------GLCKSGDIQRARKLFDG 420

Query: 143 MIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDS 202
           M   G+ PD +TY T+I+G+C++ N++ A  L  +M S   +       + F Y+ ++  
Sbjct: 421 MPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQ------PHSFVYNALVHG 474

Query: 203 LCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPN 262
            CKEG ++KA  LF EM  +G    +    TLI G+C +   +E + LF EM+     P+
Sbjct: 475 CCKEGDMEKAMNLFREMLQKGFATTLSF-NTLIDGYCKSCKIQEASQLFQEMIAKQIMPD 533

Query: 263 LLTFNVMIDCLCKGGKINEAN-----------------GLLELMIQRGLNPDRFTYNSLM 305
            +T+  +ID  CK GK+ EAN                  L E M+ +G+ PD  TY  ++
Sbjct: 534 HVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVFALFEKMVAKGVKPDEVTYGLVI 593

Query: 306 DGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVR 365
             +C    +  A ++   +  KG       +++LI   CK  ++ EA  L  ++   G++
Sbjct: 594 YAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLK 653

Query: 366 QTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKL 425
            ++   +TL+    +AG+   A ++F+ +K   + PD +T   L++G   +   ++A  L
Sbjct: 654 PSLAACSTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVNGNLNDTDSEDARNL 713

Query: 426 FHML 429
              L
Sbjct: 714 IKQL 717



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 84/300 (28%), Positives = 157/300 (52%), Gaps = 2/300 (0%)

Query: 254 MLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGR 313
           M + G  PN  T+ ++   LC+  ++NEA    E M + GL PD    ++L+DG+   G 
Sbjct: 1   MGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGD 60

Query: 314 IDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNT 373
           ID    I   M S G    +++YN+LI+G CK   +E+A  + + +I+ G +    T+  
Sbjct: 61  IDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCL 120

Query: 374 LLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNK 433
           L+ G  +    G A +L DEM+  N+ P   +Y  +I+GLC    +  A KL   +  + 
Sbjct: 121 LIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSG 180

Query: 434 FEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKAN 493
            +  + +++ LI G    GR++ A  L   +   G+ P +  Y+ +I  L + GK+E+A+
Sbjct: 181 LKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEAS 240

Query: 494 DFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
            +LL ++  G  P+ VTF   + G+ +  K ++  +   +M   +  L+P++  ++++++
Sbjct: 241 TYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEML--DHGLMPNNPLYTVLIN 298



 Score =  141 bits (356), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 96/371 (25%), Positives = 171/371 (46%), Gaps = 8/371 (2%)

Query: 219 MKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGK 278
           M  +G+ P     T +  G C A    E    F EM   G +P+    + +ID   + G 
Sbjct: 1   MGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGD 60

Query: 279 INEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNI 338
           I+E   + ++M+  G+  +  TYN L+ G C  G+++ A EI   M + GCK    ++ +
Sbjct: 61  IDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCL 120

Query: 339 LINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYN 398
           LI GYC+  N+  A+ L  ++    +  + ++Y  +++GL        A KL ++M    
Sbjct: 121 LIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSG 180

Query: 399 VEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAW 458
           ++P++  Y+ LI G      ++EA +L   +  +     I  +N +I  L KAG+++ A 
Sbjct: 181 LKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEAS 240

Query: 459 ELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGF 518
               ++  +GL P  VT+   I G  + GK+ +A  +   M  +G  PN   +  L++G 
Sbjct: 241 TYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGH 300

Query: 519 LQNNKTSKVVEL---LHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKSSYRAC 575
            +     + + +   LH +      ++PD  T S  +  L K+ +  E   V        
Sbjct: 301 FKAGNLMEALSIFRHLHALG-----VLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKG 355

Query: 576 LYVTIFQPSSL 586
           L   +F  SSL
Sbjct: 356 LVPDVFTYSSL 366


>gi|414592066|tpg|DAA42637.1| TPA: hypothetical protein ZEAMMB73_021738 [Zea mays]
          Length = 768

 Score =  253 bits (645), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 175/567 (30%), Positives = 278/567 (49%), Gaps = 39/567 (6%)

Query: 59  ARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILIN 118
           AR+ F  M      P +++FN +  A+ +        +   K++  G+  +  T NI I 
Sbjct: 195 ARHLFDEMLGRDVFPDVATFNNVLHALCQKGDVMESGALLAKVLKRGMSANKFTCNIWI- 253

Query: 119 CFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKM 178
                 RGLC + R++EA  L + M A+ V PDV+TY TL+ G C+   +  A +   +M
Sbjct: 254 ------RGLCEDGRLEEAVALVERMGAY-VAPDVVTYNTLMRGLCKDSKVQEAAQYLGRM 306

Query: 179 VSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGF 238
           ++     G I   + F+Y+ IID  CK G++ +A EL  +   +G  P  V   +LI+G 
Sbjct: 307 MN----QGCIP--DDFTYNTIIDGYCKSGMLQEATELLKDAVFKGFVPDRVTYCSLINGL 360

Query: 239 CCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDR 298
           C  G+ E    LF E      +P+L+ +N ++  LC+ G I  A  ++  M++ G +PD 
Sbjct: 361 CAEGDIERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHPDI 420

Query: 299 FTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQ 358
           +TYN +++G C +G I  A  +      KG    V ++N LI+GYCK L ++ A+ L  +
Sbjct: 421 WTYNIIINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTLIDGYCKRLKLDSALQLVER 480

Query: 359 IISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNC 418
           + + G+   VITYN++L+GL +AG+A    + F+EM L    P+  TYNILI+  CK N 
Sbjct: 481 MWTYGIAPDVITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQ 540

Query: 419 VQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSI 478
           ++EA  +   +  +        FN LI G C+ G LD A+ LF KL +KG   T  T++I
Sbjct: 541 LEEASGVIVRMCQDGLVPDAVSFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNI 600

Query: 479 MIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPE 538
           +I     K  ++ A      M   G  P++ T+  L+ G  +     +    L +M    
Sbjct: 601 LIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRILVDGLCKAANVDRAYAHLAEMI--S 658

Query: 539 RNLVPDDTTFSIVVDLLAKDEKYHECSAVSKSSYRACLYVTIFQPSSLGSMIGCTVRLMP 598
           +  VP   TF  +++LLA + +  E  A+                      I   VR+  
Sbjct: 659 KGFVPSMATFGRMLNLLAMNHRVSEAVAI----------------------IHIMVRMGV 696

Query: 599 QPEMSDT-LGDDGDGNAGPIILSAVLL 624
            PE+ DT L  D    A P IL   L+
Sbjct: 697 VPEVVDTILSTDKKEIAAPKILVEELM 723



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 159/579 (27%), Positives = 269/579 (46%), Gaps = 41/579 (7%)

Query: 2   ASRTQFRCLFSSETVSKVKLSSLFKSPRQIAAVSSPETQLNEFLHENCKSGIINLNEARY 61
           A R   R L S+  +  V   +   S R   A  S +      +    ++G   L  A  
Sbjct: 37  AYRALIRELVSAGRLDDV--DAALASARSHLAPDSLQPLYVASIQAYARAG--RLRAAVD 92

Query: 62  FFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCF- 120
            F  M      P   ++N +  A+    ++D     Y ++++ G+ PD  T  + +  F 
Sbjct: 93  AFERMDLFACPPAAPAYNAIMDALVNAAYHDQAHKVYVRMLAAGVAPDARTHTVRLKSFC 152

Query: 121 --GNKE-------------------------RGLCVENRIKEATWLFKNMIAFGVRPDVI 153
             G                            RGL        A  LF  M+   V PDV 
Sbjct: 153 LTGRPHVALRLLRSLSERGCDAKPAAYCTVVRGLYAHGHGYNARHLFDEMLGRDVFPDVA 212

Query: 154 TYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAK 213
           T+  +++  C+ G++  +  L  K++    + G+    N F+ +I I  LC++G +++A 
Sbjct: 213 TFNNVLHALCQKGDVMESGALLAKVL----KRGM--SANKFTCNIWIRGLCEDGRLEEAV 266

Query: 214 ELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCL 273
            L +E  G  + P VV   TL+ G C     +E       M++ G  P+  T+N +ID  
Sbjct: 267 AL-VERMGAYVAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTYNTIIDGY 325

Query: 274 CKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTV 333
           CK G + EA  LL+  + +G  PDR TY SL++G C  G I+ A E+F    +K  K  +
Sbjct: 326 CKSGMLQEATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALELFNEAQAKDLKPDL 385

Query: 334 VSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDE 393
           V YN L+ G C+   +  A+ +  +++  G    + TYN +++GL + G    A  + ++
Sbjct: 386 VVYNSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNISDAAVVMND 445

Query: 394 MKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGR 453
             +    PD+ T+N LIDG CK   +  A++L   +        +  +N +++GLCKAG+
Sbjct: 446 AIVKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVITYNSVLNGLCKAGK 505

Query: 454 LDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNT 513
                E F ++  KG  P  +TY+I+I   C+  +LE+A+  ++ M ++G  P+ V+FNT
Sbjct: 506 AKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMCQDGLVPDAVSFNT 565

Query: 514 LMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVV 552
           L+HGF +N        L  K+ E   +   D  TF+I++
Sbjct: 566 LIHGFCRNGDLDGAYLLFQKLDEKGYSATAD--TFNILI 602



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 139/479 (29%), Positives = 221/479 (46%), Gaps = 55/479 (11%)

Query: 29  RQIAAVSSPETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKN 88
           R  A V+      N  +   CK     + EA  + G M +    P   ++N +     K+
Sbjct: 271 RMGAYVAPDVVTYNTLMRGLCKDS--KVQEAAQYLGRMMNQGCIPDDFTYNTIIDGYCKS 328

Query: 89  RHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGV 148
                     +  V  G +PD +T   LIN       GLC E  I+ A  LF    A  +
Sbjct: 329 GMLQEATELLKDAVFKGFVPDRVTYCSLIN-------GLCAEGDIERALELFNEAQAKDL 381

Query: 149 RPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYE----------NGLISKTNI----- 193
           +PD++ Y +L+ G CR G +  AL++  +MV               NGL    NI     
Sbjct: 382 KPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNISDAAV 441

Query: 194 --------------FSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFC 239
                         F+++ +ID  CK   +D A +L   M   GI P V+   ++++G C
Sbjct: 442 VMNDAIVKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVITYNSVLNGLC 501

Query: 240 CAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRF 299
            AG  +EVN  F EM+  G RPN +T+N++I+  CK  ++ EA+G++  M Q GL PD  
Sbjct: 502 KAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMCQDGLVPDAV 561

Query: 300 TYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQI 359
           ++N+L+ G+C  G +D A  +F  +  KG   T  ++NILI  Y   LN++ A  ++ ++
Sbjct: 562 SFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEM 621

Query: 360 ISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCV 419
           IS G +  + TY  L+ GL +A     A     EM      P ++T+  +++ L  N+ V
Sbjct: 622 ISKGYKPDLYTYRILVDGLCKAANVDRAYAHLAEMISKGFVPSMATFGRMLNLLAMNHRV 681

Query: 420 QEAVKLFH--------------MLEMNKFEFGIEIFNCLIDGLCKAGRLD-NAWELFHK 463
            EAV + H              +L  +K E  I     L++ L K G +   A+E+ H+
Sbjct: 682 SEAVAIIHIMVRMGVVPEVVDTILSTDKKE--IAAPKILVEELMKKGHISYRAYEVLHE 738



 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 100/385 (25%), Positives = 171/385 (44%), Gaps = 24/385 (6%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
           N  +   C+ G+I    A      M      P I ++N++   + K  +           
Sbjct: 389 NSLVKGLCRQGLIL--HALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNISDAAVVMNDA 446

Query: 102 VSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLING 161
           +  G LPD  T N LI+       G C   ++  A  L + M  +G+ PDVITY +++NG
Sbjct: 447 IVKGYLPDVFTFNTLID-------GYCKRLKLDSALQLVERMWTYGIAPDVITYNSVLNG 499

Query: 162 FCRTGNLSVALRLHKKMVSGDYENGLIS--KTNIFSYSIIIDSLCKEGLVDKAKELFLEM 219
            C+ G          K V+  +E  ++   + N  +Y+I+I++ CK   +++A  + + M
Sbjct: 500 LCKAGK--------AKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRM 551

Query: 220 KGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKI 279
              G+ P  V   TLIHGFC  G+ +    LF ++ + G      TFN++I        +
Sbjct: 552 CQDGLVPDAVSFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNM 611

Query: 280 NEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNIL 339
             A  +   MI +G  PD +TY  L+DG C    +D A      M SKG   ++ ++  +
Sbjct: 612 QMAEKIFGEMISKGYKPDLYTYRILVDGLCKAANVDRAYAHLAEMISKGFVPSMATFGRM 671

Query: 340 INGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNV 399
           +N       V EA+++   ++  GV   V+  +T+LS      +   A K+  E  +   
Sbjct: 672 LNLLAMNHRVSEAVAIIHIMVRMGVVPEVV--DTILS---TDKKEIAAPKILVEELMKKG 726

Query: 400 EPDLSTYNILIDGLCKNNCVQEAVK 424
                 Y +L +G+  N   ++A K
Sbjct: 727 HISYRAYEVLHEGVRDNKLTRKARK 751



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 94/408 (23%), Positives = 169/408 (41%), Gaps = 43/408 (10%)

Query: 188 ISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGR----GINPAVVVCTTLIHGFCCAGN 243
           ++ + I +Y  +I  L   G +D         +       + P  V     I  +  AG 
Sbjct: 30  LTASTIPAYRALIRELVSAGRLDDVDAALASARSHLAPDSLQPLYVAS---IQAYARAGR 86

Query: 244 WEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNS 303
                  F  M      P    +N ++D L      ++A+ +   M+  G+ PD  T+  
Sbjct: 87  LRAAVDAFERMDLFACPPAAPAYNAIMDALVNAAYHDQAHKVYVRMLAAGVAPDARTHTV 146

Query: 304 LMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNG 363
            +  +CL GR   A  +  S+  +GC     +Y  ++ G     +   A  L+ +++   
Sbjct: 147 RLKSFCLTGRPHVALRLLRSLSERGCDAKPAAYCTVVRGLYAHGHGYNARHLFDEMLGRD 206

Query: 364 VRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAV 423
           V   V T+N +L  L Q G    +  L  ++    +  +  T NI I GLC++  ++EAV
Sbjct: 207 VFPDVATFNNVLHALCQKGDVMESGALLAKVLKRGMSANKFTCNIWIRGLCEDGRLEEAV 266

Query: 424 KLFHML-------------------EMNKFEFGIE---------------IFNCLIDGLC 449
            L   +                   + +K +   +                +N +IDG C
Sbjct: 267 ALVERMGAYVAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTYNTIIDGYC 326

Query: 450 KAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVV 509
           K+G L  A EL      KG VP  VTY  +I+GLC +G +E+A +     +     P++V
Sbjct: 327 KSGMLQEATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALELFNEAQAKDLKPDLV 386

Query: 510 TFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAK 557
            +N+L+ G  +       ++++++M   E    PD  T++I+++ L K
Sbjct: 387 VYNSLVKGLCRQGLILHALQVMNEMV--EEGCHPDIWTYNIIINGLCK 432



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 59/267 (22%), Positives = 110/267 (41%), Gaps = 4/267 (1%)

Query: 300 TYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVS-YNILINGYCKILNVEEAMSLYRQ 358
            Y +L+      GR+D       S  S     ++   Y   I  Y +   +  A+  + +
Sbjct: 37  AYRALIRELVSAGRLDDVDAALASARSHLAPDSLQPLYVASIQAYARAGRLRAAVDAFER 96

Query: 359 IISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNC 418
           +           YN ++  L  A     A K++  M    V PD  T+ + +   C    
Sbjct: 97  MDLFACPPAAPAYNAIMDALVNAAYHDQAHKVYVRMLAAGVAPDARTHTVRLKSFCLTGR 156

Query: 419 VQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSI 478
              A++L   L     +     +  ++ GL   G   NA  LF ++  + + P V T++ 
Sbjct: 157 PHVALRLLRSLSERGCDAKPAAYCTVVRGLYAHGHGYNARHLFDEMLGRDVFPDVATFNN 216

Query: 479 MIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPE 538
           ++H LC+KG + ++   L  + K G + N  T N  + G  ++ +  + V L+ +M    
Sbjct: 217 VLHALCQKGDVMESGALLAKVLKRGMSANKFTCNIWIRGLCEDGRLEEAVALVERMGA-- 274

Query: 539 RNLVPDDTTFSIVVDLLAKDEKYHECS 565
             + PD  T++ ++  L KD K  E +
Sbjct: 275 -YVAPDVVTYNTLMRGLCKDSKVQEAA 300


>gi|297839331|ref|XP_002887547.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297333388|gb|EFH63806.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 763

 Score =  253 bits (645), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 160/514 (31%), Positives = 259/514 (50%), Gaps = 18/514 (3%)

Query: 32  AAVSSPETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHY 91
           + VS   +  N+ LH  CK G  ++ E       +      P + ++N     + +    
Sbjct: 210 SGVSLCLSTFNKLLHVLCKKG--DVKECEKLLDKVIKRGVLPNLFTYNFFIQGLCQKGEL 267

Query: 92  DAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPD 151
           DA +    +L+  G  PD +T N LI        GLC  ++ +EA      ++  G+ PD
Sbjct: 268 DAAVRMVGRLIDQGPKPDVVTYNYLI-------YGLCKNSKFQEAEVYLGKLVNEGLEPD 320

Query: 152 VITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDK 211
             TY TLI G+C+ G + +A R+   +V+  + NG +     F+Y  +ID LC EG  ++
Sbjct: 321 SFTYNTLIAGYCKGGMVQLAERI---LVNAVF-NGFVPDE--FTYRSLIDGLCHEGETNR 374

Query: 212 AKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMID 271
           A  LF E  G+GI P V++  TLI G    G   E   L  EM + G  P + TFN++++
Sbjct: 375 ALALFNEALGKGIKPNVILYNTLIKGLSNQGLILEAAQLASEMSEKGLIPEVQTFNILVN 434

Query: 272 CLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKH 331
            LCK G +++A+GL+++MI +G  PD FT+N L+ GY    +++ A EI   M   G   
Sbjct: 435 GLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMMDNGVDP 494

Query: 332 TVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLF 391
            V +YN L+NG CK    E+ M  Y+ ++  G    + T+N LL  L +  +   A  L 
Sbjct: 495 DVYTYNSLLNGLCKTSKYEDVMETYKTMVEKGCAPNLFTFNILLESLCRYHKLDKALGLL 554

Query: 392 DEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFH-MLEMNKFEFGIEIFNCLIDGLCK 450
           +EMK  +V PD  T+  LIDG CKN  +  A  LF  M E+         +N +I    +
Sbjct: 555 EEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEVYMVSCSTPTYNIIIHAFTE 614

Query: 451 AGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVT 510
              +  A +LF ++  + L P   TY +M+ G C+ G ++    FLL M +NG  P++ T
Sbjct: 615 KLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVDLGYKFLLEMMENGFIPSLTT 674

Query: 511 FNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPD 544
              +++     ++  +   ++H+M   ++ LVP+
Sbjct: 675 LGRVINCLCVEDRVYEAAGIIHRMV--QKGLVPE 706



 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 148/503 (29%), Positives = 242/503 (48%), Gaps = 15/503 (2%)

Query: 56  LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNI 115
           + EA   F  M      P + S+N +   +  + ++D     Y ++   G+ PD  +  I
Sbjct: 92  VQEAVNVFERMDFYDCEPTVFSYNAIMSILVDSGYFDQAHKVYMRMRDRGITPDVYSFTI 151

Query: 116 LINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLH 175
            +  F       C  +R   A  L  NM + G   +V+ Y T++ GF           L 
Sbjct: 152 RMKSF-------CRTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKDEGYELF 204

Query: 176 KKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLI 235
            KM++      L +      ++ ++  LCK+G V + ++L  ++  RG+ P +      I
Sbjct: 205 GKMLASGVSLCLST------FNKLLHVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNFFI 258

Query: 236 HGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLN 295
            G C  G  +    +   ++D GP+P+++T+N +I  LCK  K  EA   L  ++  GL 
Sbjct: 259 QGLCQKGELDAAVRMVGRLIDQGPKPDVVTYNYLIYGLCKNSKFQEAEVYLGKLVNEGLE 318

Query: 296 PDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSL 355
           PD FTYN+L+ GYC  G +  A  I ++    G      +Y  LI+G C       A++L
Sbjct: 319 PDSFTYNTLIAGYCKGGMVQLAERILVNAVFNGFVPDEFTYRSLIDGLCHEGETNRALAL 378

Query: 356 YRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCK 415
           + + +  G++  VI YNTL+ GL   G    A +L  EM    + P++ T+NIL++GLCK
Sbjct: 379 FNEALGKGIKPNVILYNTLIKGLSNQGLILEAAQLASEMSEKGLIPEVQTFNILVNGLCK 438

Query: 416 NNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVT 475
             CV +A  L  ++    +   I  FN LI G     +++NA E+   +   G+ P V T
Sbjct: 439 MGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMMDNGVDPDVYT 498

Query: 476 YSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMA 535
           Y+ +++GLC+  K E   +    M + GCAPN+ TFN L+    + +K  K + LL +M 
Sbjct: 499 YNSLLNGLCKTSKYEDVMETYKTMVEKGCAPNLFTFNILLESLCRYHKLDKALGLLEEMK 558

Query: 536 EPERNLVPDDTTFSIVVDLLAKD 558
               N  PD  TF  ++D   K+
Sbjct: 559 NKSVN--PDAVTFGTLIDGFCKN 579



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 153/530 (28%), Positives = 245/530 (46%), Gaps = 22/530 (4%)

Query: 39  TQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFY 98
           T +  F  EN K      +E    FG M     S  +S+FN L   + K           
Sbjct: 186 TVVGGFYEENFK------DEGYELFGKMLASGVSLCLSTFNKLLHVLCKKGDVKECEKLL 239

Query: 99  RKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTL 158
            K++  G+LP+  T N  I       +GLC +  +  A  +   +I  G +PDV+TY  L
Sbjct: 240 DKVIKRGVLPNLFTYNFFI-------QGLCQKGELDAAVRMVGRLIDQGPKPDVVTYNYL 292

Query: 159 INGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLE 218
           I G C+      A     K+V+   E       + F+Y+ +I   CK G+V  A+ + + 
Sbjct: 293 IYGLCKNSKFQEAEVYLGKLVNEGLE------PDSFTYNTLIAGYCKGGMVQLAERILVN 346

Query: 219 MKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGK 278
               G  P      +LI G C  G       LF E L  G +PN++ +N +I  L   G 
Sbjct: 347 AVFNGFVPDEFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGL 406

Query: 279 INEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNI 338
           I EA  L   M ++GL P+  T+N L++G C +G +  A  +   M SKG    + ++NI
Sbjct: 407 ILEAAQLASEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNI 466

Query: 339 LINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYN 398
           LI+GY   L +E A+ +   ++ NGV   V TYN+LL+GL +  +     + +  M    
Sbjct: 467 LIHGYSTQLKMENALEILDVMMDNGVDPDVYTYNSLLNGLCKTSKYEDVMETYKTMVEKG 526

Query: 399 VEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAW 458
             P+L T+NIL++ LC+ + + +A+ L   ++          F  LIDG CK G LD A+
Sbjct: 527 CAPNLFTFNILLESLCRYHKLDKALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAY 586

Query: 459 ELFHKLPQKGLVP-TVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHG 517
            LF K+ +  +V  +  TY+I+IH    K  +  A      M      P+  T+  ++ G
Sbjct: 587 TLFRKMEEVYMVSCSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDG 646

Query: 518 FLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAV 567
           F +        + L +M   E   +P  TT   V++ L  +++ +E + +
Sbjct: 647 FCKTGNVDLGYKFLLEMM--ENGFIPSLTTLGRVINCLCVEDRVYEAAGI 694



 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 107/406 (26%), Positives = 185/406 (45%), Gaps = 2/406 (0%)

Query: 205 KEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLL 264
           ++G V +A  +F  M      P V     ++     +G +++ + +++ M D G  P++ 
Sbjct: 88  RKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSILVDSGYFDQAHKVYMRMRDRGITPDVY 147

Query: 265 TFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSM 324
           +F + +   C+  + + A  LL  M  +G   +   Y +++ G+      D   E+F  M
Sbjct: 148 SFTIRMKSFCRTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKDEGYELFGKM 207

Query: 325 HSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQA 384
            + G    + ++N L++  CK  +V+E   L  ++I  GV   + TYN  + GL Q G+ 
Sbjct: 208 LASGVSLCLSTFNKLLHVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNFFIQGLCQKGEL 267

Query: 385 GYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCL 444
             A ++   +     +PD+ TYN LI GLCKN+  QEA      L     E     +N L
Sbjct: 268 DAAVRMVGRLIDQGPKPDVVTYNYLIYGLCKNSKFQEAEVYLGKLVNEGLEPDSFTYNTL 327

Query: 445 IDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGC 504
           I G CK G +  A  +       G VP   TY  +I GLC +G+  +A          G 
Sbjct: 328 IAGYCKGGMVQLAERILVNAVFNGFVPDEFTYRSLIDGLCHEGETNRALALFNEALGKGI 387

Query: 505 APNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHEC 564
            PNV+ +NTL+ G        +  +L  +M+  E+ L+P+  TF+I+V+ L K     + 
Sbjct: 388 KPNVILYNTLIKGLSNQGLILEAAQLASEMS--EKGLIPEVQTFNILVNGLCKMGCVSDA 445

Query: 565 SAVSKSSYRACLYVTIFQPSSLGSMIGCTVRLMPQPEMSDTLGDDG 610
             + K       +  IF  + L       +++    E+ D + D+G
Sbjct: 446 DGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMMDNG 491



 Score =  125 bits (314), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 74/235 (31%), Positives = 123/235 (52%), Gaps = 14/235 (5%)

Query: 72  SPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVEN 131
            P + ++N L   + K   Y+ V+  Y+ +V  G  P+  T NIL+         LC  +
Sbjct: 493 DPDVYTYNSLLNGLCKTSKYEDVMETYKTMVEKGCAPNLFTFNILL-------ESLCRYH 545

Query: 132 RIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKT 191
           ++ +A  L + M    V PD +T+GTLI+GFC+ G+L  A  L +KM     E   +   
Sbjct: 546 KLDKALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKM-----EEVYMVSC 600

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
           +  +Y+III +  ++  V  A++LF EM  R + P       ++ GFC  GN +      
Sbjct: 601 STPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVDLGYKFL 660

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMD 306
           +EM++ G  P+L T   +I+CLC   ++ EA G++  M+Q+GL P+    N++ D
Sbjct: 661 LEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPE--AVNTIFD 713



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 75/296 (25%), Positives = 137/296 (46%), Gaps = 3/296 (1%)

Query: 258 GPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQR-GLNPDRFTYNSLMDGYCLVGRIDT 316
           G +  L T+  +I+ L   GK      +L  M Q  G +     Y   M  Y   G++  
Sbjct: 35  GFKHTLSTYRSIIEKLGLYGKFEAMEEVLVDMRQNVGNHMLEGVYVGAMKNYGRKGKVQE 94

Query: 317 AREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLS 376
           A  +F  M    C+ TV SYN +++        ++A  +Y ++   G+   V ++   + 
Sbjct: 95  AVNVFERMDFYDCEPTVFSYNAIMSILVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMK 154

Query: 377 GLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEF 436
              +  +   A +L + M     E ++  Y  ++ G  + N   E  +LF  +  +    
Sbjct: 155 SFCRTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKDEGYELFGKMLASGVSL 214

Query: 437 GIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFL 496
            +  FN L+  LCK G +    +L  K+ ++G++P + TY+  I GLC+KG+L+ A   +
Sbjct: 215 CLSTFNKLLHVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNFFIQGLCQKGELDAAVRMV 274

Query: 497 LYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVV 552
             +   G  P+VVT+N L++G  +N+K  +    L K+      L PD  T++ ++
Sbjct: 275 GRLIDQGPKPDVVTYNYLIYGLCKNSKFQEAEVYLGKLV--NEGLEPDSFTYNTLI 328


>gi|296083865|emb|CBI24253.3| unnamed protein product [Vitis vinifera]
          Length = 582

 Score =  252 bits (644), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 168/500 (33%), Positives = 256/500 (51%), Gaps = 52/500 (10%)

Query: 125 RGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKM-VSGDY 183
           +GLC    + EA  L + M    V PD+++Y TLING C+   L  A+ L  +M  +G +
Sbjct: 6   KGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCF 65

Query: 184 ENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGN 243
            N +   T       ++D LCK+G +D+A EL   MK +G +  VV+  TLI GFC  GN
Sbjct: 66  PNSVTCTT-------LMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGN 118

Query: 244 WEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNS 303
            +    LF EML  G   N++T++ ++  LC+ G+  EAN +L  M + G++PD  TY  
Sbjct: 119 LDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTG 178

Query: 304 LMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNG 363
           L+DG C  GR   A ++   M  KG + + V+YN+L++G CK   V +A  + R +I  G
Sbjct: 179 LIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKG 238

Query: 364 VRQTVITYNTLLSGLFQAGQAGYAQKLFDEM--KLYNVEPDLSTYNILIDGLCKNNCVQE 421
            +  V+TYNTL+ GL   G+   A KLF+ M      +EP++ T+N+LI GLCK   + +
Sbjct: 239 KKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTK 298

Query: 422 AVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIH 481
           AVK+   +        +  +N L+ G  KAG++  A EL+ ++   G VP   TYSI+I 
Sbjct: 299 AVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILID 358

Query: 482 G-----------------------------------LCRKGKLEKANDFLLYMEKNGCAP 506
           G                                   LC++G LE+A      M    C P
Sbjct: 359 GFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEP 418

Query: 507 NVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSA 566
           ++++FNT++ G L+      V EL  KM   E  L PD  TFS +++ L+K  +  E   
Sbjct: 419 DIISFNTMIDGTLKAGDFQFVKELQMKMV--EMGLRPDALTFSTLINRLSKLGELDE--- 473

Query: 567 VSKSSYRACLYVTIFQPSSL 586
            +KS+    +  + F P +L
Sbjct: 474 -AKSALER-MVASGFTPDAL 491



 Score =  245 bits (625), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 175/594 (29%), Positives = 276/594 (46%), Gaps = 63/594 (10%)

Query: 41  LNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRK 100
           +N  L   C++G   + EA      M     SP I S+N L   + K +     +    +
Sbjct: 1   MNIVLKGLCRNG--GVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLE 58

Query: 101 LVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLIN 160
           + + G  P+ +T   L++       GLC + R+ EA  L + M   G   DV+ YGTLI+
Sbjct: 59  MEAAGCFPNSVTCTTLMD-------GLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLIS 111

Query: 161 GFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMK 220
           GFC  GNL     L  +M+      G     N+ +YS ++  LC+ G   +A  +   M 
Sbjct: 112 GFCNNGNLDRGKELFDEML------GKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMA 165

Query: 221 GRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKIN 280
             GI+P VV  T LI G C  G       L   M++ G  P+ +T+NV++  LCK G + 
Sbjct: 166 EHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVI 225

Query: 281 EANGLLELMIQRG-------------------------------------LNPDRFTYNS 303
           +A  +L +MI++G                                     L P+ FT+N 
Sbjct: 226 DAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNM 285

Query: 304 LMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNG 363
           L+ G C  GR+  A +I   M  KG    +V+YN+L+ G  K   ++EAM L++Q++  G
Sbjct: 286 LIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLG 345

Query: 364 VRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAV 423
                 TY+ L+ G  +      A+ LF EM+ + + P L  YN L+  LCK   +++A 
Sbjct: 346 FVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAK 405

Query: 424 KLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGL 483
            LF  +     E  I  FN +IDG  KAG      EL  K+ + GL P  +T+S +I+ L
Sbjct: 406 SLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRL 465

Query: 484 CRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVP 543
            + G+L++A   L  M  +G  P+ + +++L+ G      T++++ LLH+MA   +  V 
Sbjct: 466 SKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMA--AKGTVL 523

Query: 544 DDTTFSIVVDLLAKDEKYHECSAVSKSSYRACLYVTIFQPSSLGSMIGCTVRLM 597
           D    S ++  L        C ++ +      L  T FQ +S G+ I C   LM
Sbjct: 524 DRKIVSTILTCL--------CHSIQEVDVME-LLPTFFQGTSEGASISCNELLM 568



 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 107/346 (30%), Positives = 173/346 (50%), Gaps = 25/346 (7%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQP--SPPISSFNLLFGAVAKNRHYDAVISFYR 99
           N  +   C  G   ++EA   F  M   +    P + +FN+L G + K       +  +R
Sbjct: 247 NTLMKGLCDKG--KVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHR 304

Query: 100 KLVSIGLLPDFLTLNILINCFGNKERGLCVE-NRIKEATWLFKNMIAFGVRPDVITYGTL 158
           K+V  G   + +T N+L+        G C++  +IKEA  L+K ++  G  P+  TY  L
Sbjct: 305 KMVKKGSCGNLVTYNMLL--------GGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSIL 356

Query: 159 INGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLE 218
           I+GFC+   L++A  L  +M +    +GL     +F Y+ ++ SLCKEG +++AK LF E
Sbjct: 357 IDGFCKMRMLNIAKGLFCEMRT----HGL--NPALFDYNTLMASLCKEGSLEQAKSLFQE 410

Query: 219 MKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGK 278
           M      P ++   T+I G   AG+++ V  L ++M+++G RP+ LTF+ +I+ L K G+
Sbjct: 411 MGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGE 470

Query: 279 INEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNI 338
           ++EA   LE M+  G  PD   Y+SL+ G  L  + DT  EI   +H    K TV+   I
Sbjct: 471 LDEAKSALERMVASGFTPDALVYDSLLKG--LSSKGDTT-EIINLLHQMAAKGTVLDRKI 527

Query: 339 ---LINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQA 381
              ++   C  +   + M L             I+ N LL  L Q+
Sbjct: 528 VSTILTCLCHSIQEVDVMELLPTFFQGTSEGASISCNELLMQLHQS 573


>gi|293330959|ref|NP_001169662.1| uncharacterized protein LOC100383543 [Zea mays]
 gi|224030695|gb|ACN34423.1| unknown [Zea mays]
 gi|414870691|tpg|DAA49248.1| TPA: hypothetical protein ZEAMMB73_502001 [Zea mays]
          Length = 756

 Score =  252 bits (643), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 147/457 (32%), Positives = 242/457 (52%), Gaps = 13/457 (2%)

Query: 78  FNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEAT 137
           +N L   +A+      + S Y ++   G+ PD +TLN LI       + LC  ++++ A 
Sbjct: 163 YNHLLNVLAEGSRMKLLESVYNEMTDRGIQPDVVTLNTLI-------KALCRAHQVRTAV 215

Query: 138 WLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYS 197
            + + M +  V PD  T+ TL+ GF   G++  ALR+  KM+    E G  S T + + +
Sbjct: 216 LMLEEMSSHAVAPDETTFTTLMQGFIEEGSIEAALRVKTKMM----ETG-CSPTRV-TVN 269

Query: 198 IIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDL 257
           ++I+  CK G V+ A     +    G  P  V   T +H  C  G+      +   ML  
Sbjct: 270 VLINGYCKMGRVEDALGYIQKEIADGFEPDQVTYNTFVHCLCQNGHVSHALKVMDLMLQE 329

Query: 258 GPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTA 317
           G  P++ T+N +I+CL K G+++EA G++  M+ RG  PD  T+N+L+   C   R++ A
Sbjct: 330 GHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALCSQNRLEEA 389

Query: 318 REIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSG 377
            ++   +  KG    V ++NILIN  CK+ +    + L+ ++ S+G     +TYN L+  
Sbjct: 390 LDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDH 449

Query: 378 LFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFG 437
           L   G+   A  L  EM+         TYN +ID LCK   ++EA ++F  ++ +     
Sbjct: 450 LCSMGKLVNALDLLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQMDAHGISRS 509

Query: 438 IEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLL 497
              FN LIDGLCKA R+D+A EL  ++ ++GL P+ +TY+ ++   C++G L+KA D L 
Sbjct: 510 AVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPSNITYNSILTHYCKQGDLKKAADILE 569

Query: 498 YMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKM 534
            M  NG   +VVT+ TL++G  +  +T   ++LL  M
Sbjct: 570 TMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGM 606



 Score =  244 bits (623), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 152/523 (29%), Positives = 259/523 (49%), Gaps = 30/523 (5%)

Query: 66  MTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKER 125
           M+    +P  ++F  L     +    +A +    K++  G  P  +T+N+LIN       
Sbjct: 221 MSSHAVAPDETTFTTLMQGFIEEGSIEAALRVKTKMMETGCSPTRVTVNVLIN------- 273

Query: 126 GLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYEN 185
           G C   R+++A    +  IA G  PD +TY T ++  C+ G++S AL++   M+   ++ 
Sbjct: 274 GYCKMGRVEDALGYIQKEIADGFEPDQVTYNTFVHCLCQNGHVSHALKVMDLMLQEGHD- 332

Query: 186 GLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWE 245
                 ++F+Y+ +I+ L K G +D+AK +  +M  RG  P      TLI   C     E
Sbjct: 333 -----PDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALCSQNRLE 387

Query: 246 EVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLM 305
           E   L  E+   G  P++ TFN++I+ LCK G  +    L E M   G  PD  TYN L+
Sbjct: 388 EALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILI 447

Query: 306 DGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVR 365
           D  C +G++  A ++   M S GC  + V+YN +I+  CK + +EEA  ++ Q+ ++G+ 
Sbjct: 448 DHLCSMGKLVNALDLLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQMDAHGIS 507

Query: 366 QTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKL 425
           ++ +T+NTL+ GL +A +   A +L ++M    ++P   TYN ++   CK   +++A  +
Sbjct: 508 RSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPSNITYNSILTHYCKQGDLKKAADI 567

Query: 426 FHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCR 485
              +  N FE  +  +  LI+GLCKAGR   A +L   +  KG+ PT   Y+ +I  L R
Sbjct: 568 LETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFR 627

Query: 486 KGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSK-----VVELLHK------- 533
           +  L  A      M + G  P+ +T+  +  G  +     K     +VE+++K       
Sbjct: 628 RNNLRDALSLFREMTEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFLVEMVNKGFMPEFS 687

Query: 534 ----MAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKSSY 572
               +AE   NL  DD   S  ++L+ +  K+ E    +   Y
Sbjct: 688 SFRMLAEGLLNLGMDDYLIS-AIELIIEKAKFRESDVSAIRGY 729



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 111/346 (32%), Positives = 175/346 (50%), Gaps = 4/346 (1%)

Query: 223 GINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEA 282
           G+     V   L++        + +  ++ EM D G +P+++T N +I  LC+  ++  A
Sbjct: 155 GVQADTAVYNHLLNVLAEGSRMKLLESVYNEMTDRGIQPDVVTLNTLIKALCRAHQVRTA 214

Query: 283 NGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILING 342
             +LE M    + PD  T+ +LM G+   G I+ A  +   M   GC  T V+ N+LING
Sbjct: 215 VLMLEEMSSHAVAPDETTFTTLMQGFIEEGSIEAALRVKTKMMETGCSPTRVTVNVLING 274

Query: 343 YCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPD 402
           YCK+  VE+A+   ++ I++G     +TYNT +  L Q G   +A K+ D M     +PD
Sbjct: 275 YCKMGRVEDALGYIQKEIADGFEPDQVTYNTFVHCLCQNGHVSHALKVMDLMLQEGHDPD 334

Query: 403 LSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFH 462
           + TYN +I+ L KN  + EA  + + +           FN LI  LC   RL+ A +L  
Sbjct: 335 VFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALCSQNRLEEALDLAR 394

Query: 463 KLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNN 522
           +L  KGL P V T++I+I+ LC+ G           M+ +GCAP+ VT+N L+       
Sbjct: 395 ELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDHLCSMG 454

Query: 523 KTSKVVELLHKMAEPERNLVPDDT-TFSIVVDLLAKDEKYHECSAV 567
           K    ++LL +M   E N  P  T T++ ++D L K  +  E   V
Sbjct: 455 KLVNALDLLKEM---ESNGCPRSTVTYNTIIDALCKQMRIEEAEEV 497



 Score =  178 bits (452), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 119/369 (32%), Positives = 182/369 (49%), Gaps = 18/369 (4%)

Query: 48  NCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLL 107
           NC S    L+EA+     M      P  ++FN L  A+      +  +   R+L   GL 
Sbjct: 343 NCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALCSQNRLEEALDLARELTVKGLS 402

Query: 108 PDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGN 167
           PD  T NILIN        LC          LF+ M + G  PD +TY  LI+  C  G 
Sbjct: 403 PDVYTFNILIN-------ALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDHLCSMGK 455

Query: 168 LSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPA 227
           L  AL L K+M S    NG    T   +Y+ IID+LCK+  +++A+E+F +M   GI+ +
Sbjct: 456 LVNALDLLKEMES----NGCPRST--VTYNTIIDALCKQMRIEEAEEVFDQMDAHGISRS 509

Query: 228 VVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLE 287
            V   TLI G C A   ++   L  +M+  G +P+ +T+N ++   CK G + +A  +LE
Sbjct: 510 AVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPSNITYNSILTHYCKQGDLKKAADILE 569

Query: 288 LMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKIL 347
            M   G   D  TY +L++G C  GR   A ++   M  KG + T  +YN +I    +  
Sbjct: 570 TMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRN 629

Query: 348 NVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFD---EMKLYNVEPDLS 404
           N+ +A+SL+R++   G     +TY  +  GL + G  G  ++ FD   EM      P+ S
Sbjct: 630 NLRDALSLFREMTEVGEPPDALTYKIVFRGLCRGG--GPIKEAFDFLVEMVNKGFMPEFS 687

Query: 405 TYNILIDGL 413
           ++ +L +GL
Sbjct: 688 SFRMLAEGL 696



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 78/312 (25%), Positives = 152/312 (48%), Gaps = 5/312 (1%)

Query: 261 PNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREI 320
           P+   +  +I  L   G  +   GL+  M + G         S ++ Y  + R D A ++
Sbjct: 87  PSRAVYEEIIQKLGTAGAFDLMEGLVREMRREGHEAGAGVVRSFVESYARLRRFDDAVDL 146

Query: 321 FLS-MHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLF 379
             + +++ G +     YN L+N   +   ++   S+Y ++   G++  V+T NTL+  L 
Sbjct: 147 VRNQLNTFGVQADTAVYNHLLNVLAEGSRMKLLESVYNEMTDRGIQPDVVTLNTLIKALC 206

Query: 380 QAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKL-FHMLEMNKFEFGI 438
           +A Q   A  + +EM  + V PD +T+  L+ G  +   ++ A+++   M+E       +
Sbjct: 207 RAHQVRTAVLMLEEMSSHAVAPDETTFTTLMQGFIEEGSIEAALRVKTKMMETGCSPTRV 266

Query: 439 EIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLY 498
            + N LI+G CK GR+++A     K    G  P  VTY+  +H LC+ G +  A   +  
Sbjct: 267 TV-NVLINGYCKMGRVEDALGYIQKEIADGFEPDQVTYNTFVHCLCQNGHVSHALKVMDL 325

Query: 499 MEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKD 558
           M + G  P+V T+NT+++   +N +  +   ++++M   +R  +PD TTF+ ++  L   
Sbjct: 326 MLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMV--DRGCLPDTTTFNTLIVALCSQ 383

Query: 559 EKYHECSAVSKS 570
            +  E   +++ 
Sbjct: 384 NRLEEALDLARE 395



 Score =  113 bits (282), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 71/283 (25%), Positives = 136/283 (48%), Gaps = 4/283 (1%)

Query: 296 PDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSL 355
           P R  Y  ++      G  D    +   M  +G +         +  Y ++   ++A+ L
Sbjct: 87  PSRAVYEEIIQKLGTAGAFDLMEGLVREMRREGHEAGAGVVRSFVESYARLRRFDDAVDL 146

Query: 356 YR-QIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLC 414
            R Q+ + GV+     YN LL+ L +  +    + +++EM    ++PD+ T N LI  LC
Sbjct: 147 VRNQLNTFGVQADTAVYNHLLNVLAEGSRMKLLESVYNEMTDRGIQPDVVTLNTLIKALC 206

Query: 415 KNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVV 474
           + + V+ AV +   +  +        F  L+ G  + G ++ A  +  K+ + G  PT V
Sbjct: 207 RAHQVRTAVLMLEEMSSHAVAPDETTFTTLMQGFIEEGSIEAALRVKTKMMETGCSPTRV 266

Query: 475 TYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKM 534
           T +++I+G C+ G++E A  ++     +G  P+ VT+NT +H   QN   S  ++++  M
Sbjct: 267 TVNVLINGYCKMGRVEDALGYIQKEIADGFEPDQVTYNTFVHCLCQNGHVSHALKVMDLM 326

Query: 535 AEPERNLVPDDTTFSIVVDLLAKDEKYHECSA-VSKSSYRACL 576
            +   +  PD  T++ V++ L+K+ +  E    V++   R CL
Sbjct: 327 LQEGHD--PDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCL 367


>gi|346703131|emb|CBX25230.1| hypothetical_protein [Oryza brachyantha]
          Length = 746

 Score =  252 bits (643), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 143/457 (31%), Positives = 246/457 (53%), Gaps = 13/457 (2%)

Query: 78  FNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEAT 137
           +N L   + +      + + Y ++   G+ PD +T N L+       + LC  ++++ A 
Sbjct: 153 YNHLLNVLVEGSKMKLLETVYSEMGERGIKPDVVTFNTLM-------KALCRAHQVRTAV 205

Query: 138 WLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYS 197
            + + M + GV PD  T+ TL+ GF   G++  ALR+  +M+    E G  S T + + +
Sbjct: 206 LMLEEMSSSGVAPDETTFTTLMQGFVEEGSIKAALRVKARML----EMG-CSPTKV-TVN 259

Query: 198 IIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDL 257
           ++I+  CK G V+ A     +    G  P  +   T ++G C  G+      +   M+  
Sbjct: 260 VLINGYCKLGRVEDALGYIQQEIANGFEPDQITYNTFVNGLCQNGHVGHALKVMDVMVQE 319

Query: 258 GPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTA 317
           G  P++ T+N++++CLCK G++ EA G+L  M++RG  PD  T+N+L+   C   R++ A
Sbjct: 320 GHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLIVALCSGNRLEEA 379

Query: 318 REIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSG 377
            ++   +  KG    V ++NILIN  CK+ + + A+ L+ ++ S+G     +TYNTL+  
Sbjct: 380 LDLARQVTLKGLSPDVYTFNILINALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLIDN 439

Query: 378 LFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFG 437
           L   G+ G A  L  EM+         TYN +IDGLCK   ++EA ++F  +++      
Sbjct: 440 LCSLGKLGKALDLLKEMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRN 499

Query: 438 IEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLL 497
              FN LIDGLCK  R+D+A +L  ++  +GL P  +TY+ ++   C++G ++KA D L 
Sbjct: 500 AITFNTLIDGLCKDKRIDDANQLISQMISEGLQPNNITYNSILTHYCKQGDIKKAADILQ 559

Query: 498 YMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKM 534
            M  NG   +VVT+ TL++G  +  +T   ++LL  M
Sbjct: 560 TMTANGFEVDVVTYGTLINGLCKAGRTQVALKLLRGM 596



 Score =  249 bits (637), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 156/539 (28%), Positives = 252/539 (46%), Gaps = 51/539 (9%)

Query: 17  SKVKLSSLFKSPRQIAAVSSPETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPIS 76
           SK+KL     S      +       N  +   C++    +  A      M+    +P  +
Sbjct: 164 SKMKLLETVYSEMGERGIKPDVVTFNTLMKALCRAH--QVRTAVLMLEEMSSSGVAPDET 221

Query: 77  SFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEA 136
           +F  L     +     A +    +++ +G  P  +T+N+LIN       G C   R+++A
Sbjct: 222 TFTTLMQGFVEEGSIKAALRVKARMLEMGCSPTKVTVNVLIN-------GYCKLGRVEDA 274

Query: 137 TWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSY 196
               +  IA G  PD ITY T +NG C+ G++  AL++   MV   ++       ++F+Y
Sbjct: 275 LGYIQQEIANGFEPDQITYNTFVNGLCQNGHVGHALKVMDVMVQEGHD------PDVFTY 328

Query: 197 SIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLD 256
           +I+++ LCK G +++AK +  +M  RG  P +    TLI   C     EE   L  ++  
Sbjct: 329 NIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLIVALCSGNRLEEALDLARQVTL 388

Query: 257 LGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDT 316
            G  P++ TFN++I+ LCK G    A  L E M   G  PD  TYN+L+D  C +G++  
Sbjct: 389 KGLSPDVYTFNILINALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLIDNLCSLGKLGK 448

Query: 317 AREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLS 376
           A ++   M S GC  + V+YN +I+G CK + +EEA  ++ Q+   G+ +  IT+NTL+ 
Sbjct: 449 ALDLLKEMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLID 508

Query: 377 GLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEF 436
           GL +  +   A +L  +M    ++P+  TYN ++   CK   +++A  +   +  N FE 
Sbjct: 509 GLCKDKRIDDANQLISQMISEGLQPNNITYNSILTHYCKQGDIKKAADILQTMTANGFEV 568

Query: 437 GIEIFNCLIDGLCKAGRLD-----------------------------------NAWELF 461
            +  +  LI+GLCKAGR                                     +A  LF
Sbjct: 569 DVVTYGTLINGLCKAGRTQVALKLLRGMRIKGMRATPKAYNPVIQSLFRRNNTRDAMNLF 628

Query: 462 HKLPQKGLVPTVVTYSIMIHGLCR-KGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFL 519
            ++ + G  P   TY I+  GLCR  G + +A DFLL M   G  P   +F  L  G L
Sbjct: 629 REMTEVGEPPDAFTYKIVFRGLCRGGGSIREAFDFLLEMVDKGFIPEFSSFRMLAEGLL 687



 Score =  205 bits (521), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 119/407 (29%), Positives = 213/407 (52%), Gaps = 8/407 (1%)

Query: 146 FGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCK 205
           FG++ D + Y  L+N       + +   ++ +M     E G+  K ++ +++ ++ +LC+
Sbjct: 144 FGIQADTVVYNHLLNVLVEGSKMKLLETVYSEM----GERGI--KPDVVTFNTLMKALCR 197

Query: 206 EGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLT 265
              V  A  +  EM   G+ P     TTL+ GF   G+ +    +   ML++G  P  +T
Sbjct: 198 AHQVRTAVLMLEEMSSSGVAPDETTFTTLMQGFVEEGSIKAALRVKARMLEMGCSPTKVT 257

Query: 266 FNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMH 325
            NV+I+  CK G++ +A G ++  I  G  PD+ TYN+ ++G C  G +  A ++   M 
Sbjct: 258 VNVLINGYCKLGRVEDALGYIQQEIANGFEPDQITYNTFVNGLCQNGHVGHALKVMDVMV 317

Query: 326 SKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAG 385
            +G    V +YNI++N  CK   +EEA  +  Q++  G    + T+NTL+  L    +  
Sbjct: 318 QEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLIVALCSGNRLE 377

Query: 386 YAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLI 445
            A  L  ++ L  + PD+ T+NILI+ LCK    Q A++LF  ++ +        +N LI
Sbjct: 378 EALDLARQVTLKGLSPDVYTFNILINALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLI 437

Query: 446 DGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCA 505
           D LC  G+L  A +L  ++   G   + VTY+ +I GLC+K ++E+A +    M+  G +
Sbjct: 438 DNLCSLGKLGKALDLLKEMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQGIS 497

Query: 506 PNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVV 552
            N +TFNTL+ G  ++ +     +L+ +M      L P++ T++ ++
Sbjct: 498 RNAITFNTLIDGLCKDKRIDDANQLISQMI--SEGLQPNNITYNSIL 542



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 120/346 (34%), Positives = 186/346 (53%), Gaps = 4/346 (1%)

Query: 223 GINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEA 282
           GI    VV   L++        + +  ++ EM + G +P+++TFN ++  LC+  ++  A
Sbjct: 145 GIQADTVVYNHLLNVLVEGSKMKLLETVYSEMGERGIKPDVVTFNTLMKALCRAHQVRTA 204

Query: 283 NGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILING 342
             +LE M   G+ PD  T+ +LM G+   G I  A  +   M   GC  T V+ N+LING
Sbjct: 205 VLMLEEMSSSGVAPDETTFTTLMQGFVEEGSIKAALRVKARMLEMGCSPTKVTVNVLING 264

Query: 343 YCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPD 402
           YCK+  VE+A+   +Q I+NG     ITYNT ++GL Q G  G+A K+ D M     +PD
Sbjct: 265 YCKLGRVEDALGYIQQEIANGFEPDQITYNTFVNGLCQNGHVGHALKVMDVMVQEGHDPD 324

Query: 403 LSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFH 462
           + TYNI+++ LCKN  ++EA  + + +        I  FN LI  LC   RL+ A +L  
Sbjct: 325 VFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLIVALCSGNRLEEALDLAR 384

Query: 463 KLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNN 522
           ++  KGL P V T++I+I+ LC+ G  + A      M+ +GC P+ VT+NTL+       
Sbjct: 385 QVTLKGLSPDVYTFNILINALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLIDNLCSLG 444

Query: 523 KTSKVVELLHKMAEPERNLVPDDT-TFSIVVDLLAKDEKYHECSAV 567
           K  K ++LL +M   E    P  T T++ ++D L K  +  E   V
Sbjct: 445 KLGKALDLLKEM---ESAGCPRSTVTYNTIIDGLCKKMRIEEAEEV 487


>gi|302759535|ref|XP_002963190.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
 gi|300168458|gb|EFJ35061.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
          Length = 573

 Score =  251 bits (642), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 147/501 (29%), Positives = 259/501 (51%), Gaps = 23/501 (4%)

Query: 72  SPPISSFNLLFGAVAKNRHYDAVISFYRKLVSI-GLLPDFLTLNILINCFGNKERGLCVE 130
           +P + +++ +     K    D      R++V+  G+ PD +T   +++       GLC +
Sbjct: 74  APDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVD-------GLCRD 126

Query: 131 NRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISK 190
            ++  A  + + M   GV PD  T+  LI G+C    +  AL+L+K++++         K
Sbjct: 127 GKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSS-----WK 181

Query: 191 TNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGL 250
            ++ +Y+ +ID  CK G ++KA ++   M+GR   P VV  ++L+HG C AG+ ++   L
Sbjct: 182 PDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDL 241

Query: 251 FIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCL 310
           F  M   G  PN++T+  +I  LC   K++ A  L++ M      PD  +YN+L+DGYC 
Sbjct: 242 FRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGYCR 301

Query: 311 VGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQI-ISNGVRQTVI 369
           +GRI+ A+++F  M +K C    ++Y  L+ G+C    +EEA  L   +  + G+   V+
Sbjct: 302 LGRIEEAKQLFKEMATKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVV 361

Query: 370 TYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHML 429
           TY+ +++G  +A +   A +   EM   NV P+  TY+ LIDGLCK   V  A+++   +
Sbjct: 362 TYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVDHAMEVLKNM 421

Query: 430 EMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKL 489
              + E  +  FN +I  LC+ G +D AW+L   +   GL P +VTY+ ++ G  R G++
Sbjct: 422 VNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRM 481

Query: 490 EKANDFLLYME----KNGCAPNVV---TFNTLMHGFLQNNKTSKVVELLHKMAEPERNLV 542
           E A +    M     K+  A N+V    F+ L+ G  +  +  K + ++ ++    R   
Sbjct: 482 EIAYELFEVMRKKAKKSSSAANLVPEQAFSALIRGLCKAREIDKAMAVVEELR--SRECE 539

Query: 543 PDDTTFSIVVDLLAKDEKYHE 563
           P +     +VD L +  +  E
Sbjct: 540 PAEEDCLAIVDGLLRAGRTEE 560



 Score =  245 bits (626), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 158/543 (29%), Positives = 269/543 (49%), Gaps = 58/543 (10%)

Query: 69  MQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLC 128
           M+  P + ++ ++     K       ++ + K+    + P+  T N+++N       GLC
Sbjct: 1   MECQPTVVTWTIIIDGFCKANQLKQALACFEKMREF-VAPNERTYNVVVN-------GLC 52

Query: 129 VENRIKEATWLFKNMI-AFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGL 187
                 +A  + K M     V PD++TY T+INGFC+ G +  A  + ++MV+ D   G+
Sbjct: 53  KARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRD---GI 109

Query: 188 ISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEV 247
               ++ +Y+ ++D LC++G +D+A E+  EMK +G+ P     + LI G+C A   +E 
Sbjct: 110 AP--DVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEA 167

Query: 248 NGLFIEMLDLGP-RPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMD 306
             L+ E+L     +P+++T+  +ID  CK G + +A  +L +M  R   P+  TY+SL+ 
Sbjct: 168 LKLYKEILTSSSWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLH 227

Query: 307 GYCLVGRIDTAREIFLSMHSKGC----------------KHTV----------------- 333
           G C  G +D A ++F  M SKGC                 H V                 
Sbjct: 228 GLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPP 287

Query: 334 --VSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLF 391
             VSYN L++GYC++  +EEA  L++++ +       ITY  L+ G   A +   A+ L 
Sbjct: 288 DTVSYNALLDGYCRLGRIEEAKQLFKEMATKSCLPDRITYTCLVRGFCNASRLEEARFLL 347

Query: 392 DEMKL-YNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCK 450
           + MK    ++PD+ TY+I++ G  +     EA +    +           ++ LIDGLCK
Sbjct: 348 ENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCK 407

Query: 451 AGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVT 510
           AGR+D+A E+   +  K + P+V T++ +I  LCR G +++A   L+ M  +G  P +VT
Sbjct: 408 AGRVDHAMEVLKNMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVT 467

Query: 511 FNTLMHGFLQNNKTSKVVELLHKM------AEPERNLVPDDTTFSIVVDLLAKDEKYHEC 564
           + TL+ GF +  +     EL   M      +    NLVP+   FS ++  L K  +  + 
Sbjct: 468 YTTLLEGFSRTGRMEIAYELFEVMRKKAKKSSSAANLVPEQ-AFSALIRGLCKAREIDKA 526

Query: 565 SAV 567
            AV
Sbjct: 527 MAV 529



 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 139/536 (25%), Positives = 237/536 (44%), Gaps = 99/536 (18%)

Query: 18  KVKLSS----LFKSPRQIAAVSSPETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSP 73
           K +L+S    + K  R   +V+      +  ++  CK G ++          +T    +P
Sbjct: 53  KARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMD-RACEILREMVTRDGIAP 111

Query: 74  PISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRI 133
            + ++  +   + ++   D      R++   G+ PD  T + LI        G C   ++
Sbjct: 112 DVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALIT-------GWCNARKV 164

Query: 134 KEATWLFKNMI-AFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
            EA  L+K ++ +   +PDV+TY  LI+GFC++GNL  A+++   M       G     N
Sbjct: 165 DEALKLYKEILTSSSWKPDVVTYTALIDGFCKSGNLEKAMKMLGVM------EGRKCVPN 218

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCA----------- 241
           + +YS ++  LCK G +D+A +LF  M  +G  P VV  TTLIHG C A           
Sbjct: 219 VVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMD 278

Query: 242 ------------------------GNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGG 277
                                   G  EE   LF EM      P+ +T+  ++   C   
Sbjct: 279 EMTATCCPPDTVSYNALLDGYCRLGRIEEAKQLFKEMATKSCLPDRITYTCLVRGFCNAS 338

Query: 278 KINEANGLLE------------------------------------LMIQRGLNPDRFTY 301
           ++ EA  LLE                                     MI R + P+  TY
Sbjct: 339 RLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTY 398

Query: 302 NSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIIS 361
           +SL+DG C  GR+D A E+  +M +K  + +V ++N +I   C++ +++EA  L   + +
Sbjct: 399 SSLIDGLCKAGRVDHAMEVLKNMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAA 458

Query: 362 NGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLY--------NVEPDLSTYNILIDGL 413
           +G+   ++TY TLL G  + G+   A +LF+ M+          N+ P+   ++ LI GL
Sbjct: 459 HGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRKKAKKSSSAANLVPE-QAFSALIRGL 517

Query: 414 CKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGL 469
           CK   + +A+ +   L   + E   E    ++DGL +AGR + A +L + + + GL
Sbjct: 518 CKAREIDKAMAVVEELRSRECEPAEEDCLAIVDGLLRAGRTEEAGKLINSISKVGL 573


>gi|224111362|ref|XP_002315826.1| predicted protein [Populus trichocarpa]
 gi|222864866|gb|EEF01997.1| predicted protein [Populus trichocarpa]
          Length = 636

 Score =  251 bits (641), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 156/505 (30%), Positives = 258/505 (51%), Gaps = 17/505 (3%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
           N FLH   K+G  +L  +R FF  M     +P + ++N++ G V K        S + ++
Sbjct: 101 NAFLHRLSKAGEGDL--SRDFFRDMVGAGIAPTVFTYNIMIGHVCKEGDMLTARSLFEQM 158

Query: 102 VSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLING 161
             +GL PD +T N LI+ +G  + GL     + E+  LF+ M   G  PDVITY  LIN 
Sbjct: 159 KKMGLTPDIVTYNTLIDGYG--KIGL-----LDESVCLFEEMKFMGCEPDVITYNALINS 211

Query: 162 FCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKG 221
           FC+   +  A    ++M   D       K N+ SYS +ID+LCKEG++  A + F++M  
Sbjct: 212 FCKFKGMLRAFEFFREMKDKDL------KPNVISYSTLIDALCKEGMMQMAIKFFVDMTR 265

Query: 222 RGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINE 281
            G+ P     ++LI   C AGN  E   L  EML      N++T+  ++D LC+ G +NE
Sbjct: 266 VGLLPNEFTYSSLIDANCKAGNLGEAFMLADEMLQEHVDLNIVTYTTLLDGLCEEGMMNE 325

Query: 282 ANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILIN 341
           A  L   M + G+ P+   Y +L+ G+  V  +D A E+F  M  K  K  ++ +  ++ 
Sbjct: 326 AEELFRAMGKAGVTPNLQAYTALIHGHIKVRSMDKAMELFNEMREKDIKPDILLWGTIVW 385

Query: 342 GYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEP 401
           G C    +EE   +  ++  +G+    + Y TL+   F+AG    A  L +EM+    E 
Sbjct: 386 GLCSESKLEECKIIMTEMKESGIGANPVIYTTLMDAYFKAGNRTEAINLLEEMRDLGTEV 445

Query: 402 DLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELF 461
            + T+  LIDGLCK   VQEA+  F  +  +  +  + ++  LIDGLCK   + +A +LF
Sbjct: 446 TVVTFCALIDGLCKRGLVQEAIYYFGRMPDHDLQPNVAVYTALIDGLCKNNCIGDAKKLF 505

Query: 462 HKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQN 521
            ++  K ++P  + Y+ MI G  + G  ++A +    M + G   ++  + +L+ G  Q 
Sbjct: 506 DEMQDKNMIPDKIAYTAMIDGNLKHGNFQEALNMRNKMMEMGIELDLYAYTSLVWGLSQC 565

Query: 522 NKTSKVVELLHKMAEPERNLVPDDT 546
            +  +  + L +M    + ++PD+T
Sbjct: 566 GQVQQARKFLAEMI--GKGIIPDET 588



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 137/516 (26%), Positives = 243/516 (47%), Gaps = 19/516 (3%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
           P    F+ LF  + +    +A    + ++    +LP   + N  ++       G    + 
Sbjct: 60  PGFGVFDALFSVLVELGMLEAAGQCFLRMTKFRVLPKARSCNAFLHRLSKAGEGDLSRD- 118

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
                  F++M+  G+ P V TY  +I   C+ G++  A  L ++M     + GL    +
Sbjct: 119 ------FFRDMVGAGIAPTVFTYNIMIGHVCKEGDMLTARSLFEQM----KKMGLTP--D 166

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
           I +Y+ +ID   K GL+D++  LF EMK  G  P V+    LI+ FC           F 
Sbjct: 167 IVTYNTLIDGYGKIGLLDESVCLFEEMKFMGCEPDVITYNALINSFCKFKGMLRAFEFFR 226

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
           EM D   +PN+++++ +ID LCK G +  A      M + GL P+ FTY+SL+D  C  G
Sbjct: 227 EMKDKDLKPNVISYSTLIDALCKEGMMQMAIKFFVDMTRVGLLPNEFTYSSLIDANCKAG 286

Query: 313 RIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYN 372
            +  A  +   M  +     +V+Y  L++G C+   + EA  L+R +   GV   +  Y 
Sbjct: 287 NLGEAFMLADEMLQEHVDLNIVTYTTLLDGLCEEGMMNEAEELFRAMGKAGVTPNLQAYT 346

Query: 373 TLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMN 432
            L+ G  +      A +LF+EM+  +++PD+  +  ++ GLC  + ++E   +  M EM 
Sbjct: 347 ALIHGHIKVRSMDKAMELFNEMREKDIKPDILLWGTIVWGLCSESKLEECKII--MTEMK 404

Query: 433 KFEFGIE--IFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLE 490
           +   G    I+  L+D   KAG    A  L  ++   G   TVVT+  +I GLC++G ++
Sbjct: 405 ESGIGANPVIYTTLMDAYFKAGNRTEAINLLEEMRDLGTEVTVVTFCALIDGLCKRGLVQ 464

Query: 491 KANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSI 550
           +A  +   M  +   PNV  +  L+ G  +NN      +L  +M +  +N++PD   ++ 
Sbjct: 465 EAIYYFGRMPDHDLQPNVAVYTALIDGLCKNNCIGDAKKLFDEMQD--KNMIPDKIAYTA 522

Query: 551 VVDLLAKDEKYHECSAVSKSSYRACLYVTIFQPSSL 586
           ++D   K   + E   +        + + ++  +SL
Sbjct: 523 MIDGNLKHGNFQEALNMRNKMMEMGIELDLYAYTSL 558



 Score =  194 bits (494), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 139/503 (27%), Positives = 238/503 (47%), Gaps = 46/503 (9%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CK G  ++  AR  F  M  M  +P I ++N L     K    D  +  + ++  +G  P
Sbjct: 143 CKEG--DMLTARSLFEQMKKMGLTPDIVTYNTLIDGYGKIGLLDESVCLFEEMKFMGCEP 200

Query: 109 DFLTLNILINCFGN--------------KER--------------GLCVENRIKEATWLF 140
           D +T N LIN F                K++               LC E  ++ A   F
Sbjct: 201 DVITYNALINSFCKFKGMLRAFEFFREMKDKDLKPNVISYSTLIDALCKEGMMQMAIKFF 260

Query: 141 KNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIII 200
            +M   G+ P+  TY +LI+  C+ GNL  A  L  +M+    +       NI +Y+ ++
Sbjct: 261 VDMTRVGLLPNEFTYSSLIDANCKAGNLGEAFMLADEMLQEHVD------LNIVTYTTLL 314

Query: 201 DSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPR 260
           D LC+EG++++A+ELF  M   G+ P +   T LIHG     + ++   LF EM +   +
Sbjct: 315 DGLCEEGMMNEAEELFRAMGKAGVTPNLQAYTALIHGHIKVRSMDKAMELFNEMREKDIK 374

Query: 261 PNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREI 320
           P++L +  ++  LC   K+ E   ++  M + G+  +   Y +LMD Y   G    A  +
Sbjct: 375 PDILLWGTIVWGLCSESKLEECKIIMTEMKESGIGANPVIYTTLMDAYFKAGNRTEAINL 434

Query: 321 FLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQ 380
              M   G + TVV++  LI+G CK   V+EA+  + ++  + ++  V  Y  L+ GL +
Sbjct: 435 LEEMRDLGTEVTVVTFCALIDGLCKRGLVQEAIYYFGRMPDHDLQPNVAVYTALIDGLCK 494

Query: 381 AGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFH-MLEMNKFEFGIE 439
               G A+KLFDEM+  N+ PD   Y  +IDG  K+   QEA+ + + M+EM   E  + 
Sbjct: 495 NNCIGDAKKLFDEMQDKNMIPDKIAYTAMIDGNLKHGNFQEALNMRNKMMEMG-IELDLY 553

Query: 440 IFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDF---- 495
            +  L+ GL + G++  A +   ++  KG++P     + ++      G +++A +     
Sbjct: 554 AYTSLVWGLSQCGQVQQARKFLAEMIGKGIIPDETLCTRLLRKHYELGNIDEAIELQNEL 613

Query: 496 ----LLYMEKNGCAPNVVTFNTL 514
               L++   N   PN+ T + L
Sbjct: 614 VEKGLIHGNSNPAVPNIQTRDDL 636


>gi|359485815|ref|XP_003633341.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Vitis vinifera]
          Length = 822

 Score =  251 bits (641), Expect = 9e-64,   Method: Compositional matrix adjust.
 Identities = 165/528 (31%), Positives = 254/528 (48%), Gaps = 54/528 (10%)

Query: 77  SFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEA 136
           S N L   +AK    +   + Y+++++ G+ P  LT N LIN    K        +++EA
Sbjct: 165 SCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKK-------GKVREA 217

Query: 137 TWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSY 196
             +   +  + + PDV TY +LI G CR  NL +A  +  +MV    +       N  +Y
Sbjct: 218 ELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCD------PNSVTY 271

Query: 197 SIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLD 256
           S +I+ LC EG VD+A ++  EM  +GI P V   T  I   C   + EE   L   M  
Sbjct: 272 STLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKK 331

Query: 257 LGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDT 316
            G RPN+ T+  +I  L + GK+  A GL   M++ GL P+  TYN+L++  C+ GR  T
Sbjct: 332 RGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFST 391

Query: 317 AREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLS 376
           A +IF  M   G      +YN +I G C   ++E+AM L+ +++  G   TV+TYNTL++
Sbjct: 392 ALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLIN 451

Query: 377 GLFQAGQAGYAQKLFDEMKLYNVEPDLSTYN----------------------------- 407
           G    G    A +L D MK    EPD  TYN                             
Sbjct: 452 GYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNP 511

Query: 408 ------ILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELF 461
                  LIDG  K+  V  A+ L   +E       +E +N +I+GL K  R   A ++ 
Sbjct: 512 NPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKIC 571

Query: 462 HKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQN 521
            K+ ++GL+P V+TY+ +I GLCR G+ + A      MEK  C PN+ T+++L++G  Q 
Sbjct: 572 DKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQE 631

Query: 522 NKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSK 569
            K  +   +     EP  +      T+S +V  L +  +++E   + K
Sbjct: 632 GKADEAERMSEIGCEPTLD------TYSTLVSGLCRKGRFYEAEQLVK 673



 Score =  238 bits (608), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 154/514 (29%), Positives = 253/514 (49%), Gaps = 52/514 (10%)

Query: 56  LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNI 115
           + EA      +     SP + ++  L     +NR+ D     + ++V  G  P+ +T + 
Sbjct: 214 VREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYST 273

Query: 116 LINCFGNKERGLCVENRIKEATWLFKNMIAFGV--------------------------- 148
           LIN       GLC E R+ EA  + + MI  G+                           
Sbjct: 274 LIN-------GLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELV 326

Query: 149 --------RPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIII 200
                   RP+V TY  LI+G  R G L VA+ L+ KM+    + GL+   N  +Y+ +I
Sbjct: 327 ARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKML----KEGLVP--NTVTYNALI 380

Query: 201 DSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPR 260
           + LC  G    A ++F  M+G G          +I G C  G+ E+   LF +ML +GP 
Sbjct: 381 NELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPL 440

Query: 261 PNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREI 320
           P ++T+N +I+     G +N A  LL+LM + G  PD +TYN L+ G+   G++++A   
Sbjct: 441 PTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFY 500

Query: 321 FLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQ 380
           F  M   G     VSY  LI+G+ K   V+ A+SL +++   G    V +YN +++GL +
Sbjct: 501 FQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSK 560

Query: 381 AGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEI 440
             +   A+K+ D+M    + P++ TY  LIDGLC+N   Q A K+FH +E  K    +  
Sbjct: 561 ENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYT 620

Query: 441 FNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYME 500
           ++ LI GLC+ G+ D A     ++ + G  PT+ TYS ++ GLCRKG+  +A   +  M+
Sbjct: 621 YSSLIYGLCQEGKADEA----ERMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMK 676

Query: 501 KNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKM 534
           + G  P+   + +L+    +N +    +++ H +
Sbjct: 677 ERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSI 710



 Score =  219 bits (558), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 143/467 (30%), Positives = 235/467 (50%), Gaps = 38/467 (8%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILIN--CFGNK------- 123
           P + ++  L   +++    +  I  Y K++  GL+P+ +T N LIN  C G +       
Sbjct: 336 PNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKI 395

Query: 124 -------------------ERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCR 164
                               +GLC+   I++A  LF+ M+  G  P V+TY TLING+  
Sbjct: 396 FHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLT 455

Query: 165 TGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGI 224
            GN++ A RL   M     ENG   + + ++Y+ ++    K G ++ A   F EM   G+
Sbjct: 456 KGNVNNAARLLDLM----KENG--CEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGL 509

Query: 225 NPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANG 284
           NP  V  T LI G    G  +    L   M ++G  PN+ ++N +I+ L K  + +EA  
Sbjct: 510 NPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEK 569

Query: 285 LLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYC 344
           + + M+++GL P+  TY +L+DG C  GR   A +IF  M  + C   + +Y+ LI G C
Sbjct: 570 ICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLC 629

Query: 345 KILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLS 404
           +    +EA     ++   G   T+ TY+TL+SGL + G+   A++L  +MK     PD  
Sbjct: 630 QEGKADEA----ERMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDRE 685

Query: 405 TYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKL 464
            Y  L+   CKN  V  A+K+FH +E   F+  + I+  LI  LCKAG+++ A  LF  +
Sbjct: 686 IYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNM 745

Query: 465 PQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTF 511
            +K      + +++++ GL ++G+L+     L  ME     PN+ T+
Sbjct: 746 LEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIMESKNFTPNIQTY 792



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 123/398 (30%), Positives = 195/398 (48%), Gaps = 37/398 (9%)

Query: 198 IIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDL 257
           ++I +   E  + +  +   E+ G G   ++  C TL+         E    L+ +ML+ 
Sbjct: 133 LMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNS 192

Query: 258 GPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTA 317
           G +P+LLTFN +I+ L K GK+ EA  +L  + Q  L+PD FTY SL+ G+C    +D A
Sbjct: 193 GIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLA 252

Query: 318 REIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYN----- 372
             +F  M  +GC    V+Y+ LING C    V+EA+ +  ++I  G+  TV TY      
Sbjct: 253 FGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITA 312

Query: 373 ------------------------------TLLSGLFQAGQAGYAQKLFDEMKLYNVEPD 402
                                          L+SGL + G+   A  L+ +M    + P+
Sbjct: 313 LCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPN 372

Query: 403 LSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFH 462
             TYN LI+ LC       A+K+FH +E +      + +N +I GLC  G ++ A  LF 
Sbjct: 373 TVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFE 432

Query: 463 KLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNN 522
           K+ + G +PTVVTY+ +I+G   KG +  A   L  M++NGC P+  T+N L+ GF +  
Sbjct: 433 KMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWG 492

Query: 523 KTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEK 560
           K         +M E   N  P+  +++ ++D  +KD K
Sbjct: 493 KLESASFYFQEMVECGLN--PNPVSYTALIDGHSKDGK 528



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 121/424 (28%), Positives = 202/424 (47%), Gaps = 21/424 (4%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
           NE +   C  G  ++ +A   F  M  M P P + ++N L        + +        +
Sbjct: 412 NEIIKGLCLGG--DIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLM 469

Query: 102 VSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLING 161
              G  PD  T N L++ F           +++ A++ F+ M+  G+ P+ ++Y  LI+G
Sbjct: 470 KENGCEPDEWTYNELVSGFSKW-------GKLESASFYFQEMVECGLNPNPVSYTALIDG 522

Query: 162 FCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKG 221
             + G + +AL L K+M        +    N+ SY+ +I+ L KE    +A+++  +M  
Sbjct: 523 HSKDGKVDIALSLLKRM------EEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVE 576

Query: 222 RGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINE 281
           +G+ P V+  TTLI G C  G  +    +F +M      PNL T++ +I  LC+ GK +E
Sbjct: 577 QGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADE 636

Query: 282 ANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKG-CKHTVVSYNILI 340
           A    E M + G  P   TY++L+ G C  GR   A ++   M  +G C    + Y++LI
Sbjct: 637 A----ERMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLI 692

Query: 341 NGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVE 400
             +CK L V+ A+ ++  I + G +  +  Y  L+  L +AGQ   AQ LFD M      
Sbjct: 693 -AHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWN 751

Query: 401 PDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWEL 460
            D   + +L+DGL K   +   +KL H++E   F   I+ +  L   L + G+   +  L
Sbjct: 752 ADEIVWTVLVDGLLKEGELDLCMKLLHIMESKNFTPNIQTYVILGRELSRIGKSIESEPL 811

Query: 461 FHKL 464
             KL
Sbjct: 812 ADKL 815



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 105/372 (28%), Positives = 160/372 (43%), Gaps = 54/372 (14%)

Query: 38  ETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISF 97
           E   NE +    K G   L  A ++F  M     +P   S+  L    +K+   D  +S 
Sbjct: 478 EWTYNELVSGFSKWG--KLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSL 535

Query: 98  YRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGT 157
            +++  +G  P+  + N +IN       GL  ENR  EA  +   M+  G+ P+VITY T
Sbjct: 536 LKRMEEMGCNPNVESYNAVIN-------GLSKENRFSEAEKICDKMVEQGLLPNVITYTT 588

Query: 158 LINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFL 217
           LI+G CR G    A ++   M             N+++YS +I  LC+EG  D+A+    
Sbjct: 589 LIDGLCRNGRTQFAFKIFHDMEKRK------CLPNLYTYSSLIYGLCQEGKADEAER--- 639

Query: 218 EMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGG 277
            M   G  P +   +TL+ G C  G + E                               
Sbjct: 640 -MSEIGCEPTLDTYSTLVSGLCRKGRFYE------------------------------- 667

Query: 278 KINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYN 337
               A  L++ M +RG  PDR  Y SL+  +C    +D A +IF S+ +KG +  +  Y 
Sbjct: 668 ----AEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYR 723

Query: 338 ILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLY 397
            LI   CK   VEEA +L+  ++        I +  L+ GL + G+     KL   M+  
Sbjct: 724 ALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIMESK 783

Query: 398 NVEPDLSTYNIL 409
           N  P++ TY IL
Sbjct: 784 NFTPNIQTYVIL 795


>gi|357494039|ref|XP_003617308.1| Auxin response factor [Medicago truncatula]
 gi|355518643|gb|AET00267.1| Auxin response factor [Medicago truncatula]
          Length = 948

 Score =  251 bits (640), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 168/571 (29%), Positives = 273/571 (47%), Gaps = 73/571 (12%)

Query: 72  SPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVEN 131
           SP + +F ++  A       D+  S  R +   G +P+ +   +LI+        L   N
Sbjct: 197 SPTVYTFGVVMKAFCMVNEVDSACSLLRDMTKHGCVPNSIIYQMLIH-------ALSENN 249

Query: 132 RIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDY-ENGLISK 190
           R+ EA  L + M   G  PDV T+  +I+G C+ G +  A +LH +M+  D+  + LI  
Sbjct: 250 RVNEAMKLLEEMFLMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQ- 308

Query: 191 TNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGL 250
                   ++  LC+ G VD+A+ +  ++     NP  V+  TLI+G+  +G +EE   L
Sbjct: 309 ------GYLMHGLCRMGKVDEARAMLSKIP----NPNTVLYNTLINGYVVSGRFEEAKDL 358

Query: 251 -FIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYC 309
            +  M+  G  P+  TFN+MID LCK G +  A   L+ M+++G  P+  TY  L+DG+C
Sbjct: 359 LYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFC 418

Query: 310 -----------------------------LVG------RIDTAREIFLSMHSKGCKHTVV 334
                                        L+G      +I  A +++  M SKGCK  + 
Sbjct: 419 KQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIY 478

Query: 335 SYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEM 394
           ++N LI G CK   +EEA+ LYR ++  GV    +TYNTL+    +      A KL  EM
Sbjct: 479 TFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLVGEM 538

Query: 395 KLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIF------NCLIDGL 448
           +      D  TYN LI  LCK    ++ + L   +      FG EIF      N LI+  
Sbjct: 539 RFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQM------FGEEIFPSINSCNILINSF 592

Query: 449 CKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNV 508
           C+ G++++A +    + Q+GL P +VTY+ +I+GLC+ G+ ++A +    ++  G  P+ 
Sbjct: 593 CRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDA 652

Query: 509 VTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVS 568
           VT+NTL+  +      +   +LL K        +P++ T+SI+++   K+    E   + 
Sbjct: 653 VTYNTLISRYCYEGLFNDACQLLFKGV--SNGFIPNEITWSILINYFVKNNSDSEQFTIL 710

Query: 569 KSSYRACLYVTIFQPSSLGSMIGCTVRLMPQ 599
             ++   L   I   SS    IGC    M Q
Sbjct: 711 MGNWGFWLAAIIRHVSS----IGCIAIFMWQ 737



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 123/406 (30%), Positives = 189/406 (46%), Gaps = 42/406 (10%)

Query: 195 SYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFC--------------- 239
           SY+++++ L        A  +F +M  RGI+P V     ++  FC               
Sbjct: 167 SYNVVLEILVAGNCPKVAPNVFYDMLSRGISPTVYTFGVVMKAFCMVNEVDSACSLLRDM 226

Query: 240 ----CAGNW----------------EEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKI 279
               C  N                  E   L  EM  +G  P++ TFN +I  LCK G+I
Sbjct: 227 TKHGCVPNSIIYQMLIHALSENNRVNEAMKLLEEMFLMGCEPDVQTFNDVIHGLCKAGRI 286

Query: 280 NEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNIL 339
           +EA  L + M+ R    D      LM G C +G++D AR    +M SK      V YN L
Sbjct: 287 HEAAKLHDRMLLRDFTADALIQGYLMHGLCRMGKVDEAR----AMLSKIPNPNTVLYNTL 342

Query: 340 INGYCKILNVEEAMS-LYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYN 398
           INGY      EEA   LY+ ++  G      T+N ++ GL + G    A +  DEM    
Sbjct: 343 INGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKG 402

Query: 399 VEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAW 458
            EP++ TY ILIDG CK    +EA K+ + +           +NCLI  LCK G++ +A 
Sbjct: 403 FEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDAL 462

Query: 459 ELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGF 518
           +++ ++  KG  P + T++ +I+GLC+  K+E+A      M   G   N VT+NTL+H F
Sbjct: 463 QMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAF 522

Query: 519 LQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHEC 564
           L+     +  +L+ +M    R    D+ T++ ++  L K     +C
Sbjct: 523 LRLELIQQADKLVGEMR--FRGCPLDNITYNGLIKALCKTGATEKC 566



 Score =  132 bits (331), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 99/352 (28%), Positives = 162/352 (46%), Gaps = 10/352 (2%)

Query: 222 RGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINE 281
           RG   +  V   LI      G ++ ++ L  +M D G       F +++    K G   +
Sbjct: 88  RGYIHSFHVYYLLIDKLGNVGEFKMIDKLLKQMKDEGCVFKESLFILIMRYYGKAGLPGQ 147

Query: 282 ANGLL-ELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILI 340
           A  LL ++       P   +YN +++          A  +F  M S+G   TV ++ +++
Sbjct: 148 ATRLLLDMWGVYCFEPTFKSYNVVLEILVAGNCPKVAPNVFYDMLSRGISPTVYTFGVVM 207

Query: 341 NGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVE 400
             +C +  V+ A SL R +  +G     I Y  L+  L +  +   A KL +EM L   E
Sbjct: 208 KAFCMVNEVDSACSLLRDMTKHGCVPNSIIYQMLIHALSENNRVNEAMKLLEEMFLMGCE 267

Query: 401 PDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWEL 460
           PD+ T+N +I GLCK   + EA KL   + +  F     I   L+ GLC+ G++D A  +
Sbjct: 268 PDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQGYLMHGLCRMGKVDEARAM 327

Query: 461 FHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLY--MEKNGCAPNVVTFNTLMHGF 518
             K+P     P  V Y+ +I+G    G+ E+A D LLY  M   G  P+  TFN ++ G 
Sbjct: 328 LSKIPN----PNTVLYNTLINGYVVSGRFEEAKD-LLYKNMVIAGFEPDAFTFNIMIDGL 382

Query: 519 LQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKS 570
            +       +E L +M   ++   P+  T++I++D   K   + E S V  S
Sbjct: 383 CKKGYLVSALEFLDEMV--KKGFEPNVITYTILIDGFCKQGHFEEASKVVNS 432



 Score =  105 bits (261), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 77/258 (29%), Positives = 123/258 (47%), Gaps = 15/258 (5%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CK G I   +A   +G M+     P I +FN L   + KN   +  +  YR ++  G++ 
Sbjct: 453 CKDGKIQ--DALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIA 510

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           + +T N LI+ F   E        I++A  L   M   G   D ITY  LI   C+TG  
Sbjct: 511 NTVTYNTLIHAFLRLE-------LIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGAT 563

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
              L L ++M   +         +I S +I+I+S C+ G V+ A +   +M  RG+ P +
Sbjct: 564 EKCLGLIEQMFGEEI------FPSINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDI 617

Query: 229 VVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLEL 288
           V   +LI+G C  G ++E   LF  +   G  P+ +T+N +I   C  G  N+A  LL  
Sbjct: 618 VTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLISRYCYEGLFNDACQLLFK 677

Query: 289 MIQRGLNPDRFTYNSLMD 306
            +  G  P+  T++ L++
Sbjct: 678 GVSNGFIPNEITWSILIN 695


>gi|357125354|ref|XP_003564359.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 665

 Score =  251 bits (640), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 145/487 (29%), Positives = 250/487 (51%), Gaps = 21/487 (4%)

Query: 77  SFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEA 136
           ++N L     +    DA     R + S+ + PD  T   LI       RGLC   R+ +A
Sbjct: 107 AYNTLVAGYCRYGRLDAA---RRLIASMPVPPDAYTYTPLI-------RGLCDRGRVGDA 156

Query: 137 TWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSY 196
             L  +M+    +P V+TY  L+   C++     A+++  +M +           NI +Y
Sbjct: 157 LSLLDDMLRRECQPSVVTYTVLLEAVCKSSGFGQAMKVLDEMRAKG------CTPNIVTY 210

Query: 197 SIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLD 256
           ++II+ +C+E  VD A+++   +   G  P  V  TT++ G C A  WE+V  LF EM++
Sbjct: 211 NVIINGMCREDRVDDARQILNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEVLFCEMVE 270

Query: 257 LGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDT 316
               PN +TF++++   C+GG +  A  +L+ M + G   +    N +++  C  GR+D 
Sbjct: 271 NNCVPNEVTFDMLVRFFCRGGMVERAIEVLDRMSEHGCTANTTLCNIVINSICKQGRVDD 330

Query: 317 AREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLS 376
           A E   +M S GC    +SY  ++ G C+    E+A  L  +++        +T+NT + 
Sbjct: 331 AFEFLNNMGSYGCSPDTISYTTVLKGLCRAGRWEDAKELLNEMVRKNCPPNEVTFNTFIC 390

Query: 377 GLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEF 436
            L Q G    A  L ++M  Y     + TYN L++G C    V  A++LF+ L     E 
Sbjct: 391 ILCQKGLIDQAILLIEQMPEYGCSVGIVTYNALVNGFCVQGRVDSALELFNSL---PCEP 447

Query: 437 GIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFL 496
               +  L+ GLC A RLD A EL  ++ Q      VVT+++++   C+KG +E+A + +
Sbjct: 448 NTITYTTLLTGLCHAERLDAAAELLAEMMQNDCPLNVVTFNVLVSFFCQKGFVEEAIELV 507

Query: 497 LYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLA 556
             M ++GC PN++TFNTL+ G  ++  + + +ELLH +    + +  D  T+S +VD+L+
Sbjct: 508 QQMMEHGCTPNLITFNTLLDGITEDCNSEEALELLHGLV--SKGISLDTITYSSIVDVLS 565

Query: 557 KDEKYHE 563
           ++++  E
Sbjct: 566 REDRIEE 572



 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 140/507 (27%), Positives = 251/507 (49%), Gaps = 53/507 (10%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           C  G   + +A      M   +  P + ++ +L  AV K+  +   +    ++ + G  P
Sbjct: 148 CDRG--RVGDALSLLDDMLRRECQPSVVTYTVLLEAVCKSSGFGQAMKVLDEMRAKGCTP 205

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLING------- 161
           + +T N++IN       G+C E+R+ +A  +   + ++G +PD ++Y T++ G       
Sbjct: 206 NIVTYNVIIN-------GMCREDRVDDARQILNRLSSYGFQPDTVSYTTVLKGLCAAKRW 258

Query: 162 ----------------------------FCRTGNLSVALRLHKKMVSGDYENGLISKTNI 193
                                       FCR G +  A+ +  +M     E+G  + T +
Sbjct: 259 EDVEVLFCEMVENNCVPNEVTFDMLVRFFCRGGMVERAIEVLDRM----SEHGCTANTTL 314

Query: 194 FSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIE 253
            +  I+I+S+CK+G VD A E    M   G +P  +  TT++ G C AG WE+   L  E
Sbjct: 315 CN--IVINSICKQGRVDDAFEFLNNMGSYGCSPDTISYTTVLKGLCRAGRWEDAKELLNE 372

Query: 254 MLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGR 313
           M+     PN +TFN  I  LC+ G I++A  L+E M + G +    TYN+L++G+C+ GR
Sbjct: 373 MVRKNCPPNEVTFNTFICILCQKGLIDQAILLIEQMPEYGCSVGIVTYNALVNGFCVQGR 432

Query: 314 IDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNT 373
           +D+A E+F   +S  C+   ++Y  L+ G C    ++ A  L  +++ N     V+T+N 
Sbjct: 433 VDSALELF---NSLPCEPNTITYTTLLTGLCHAERLDAAAELLAEMMQNDCPLNVVTFNV 489

Query: 374 LLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNK 433
           L+S   Q G    A +L  +M  +   P+L T+N L+DG+ ++   +EA++L H L    
Sbjct: 490 LVSFFCQKGFVEEAIELVQQMMEHGCTPNLITFNTLLDGITEDCNSEEALELLHGLVSKG 549

Query: 434 FEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKAN 493
                  ++ ++D L +  R++ A ++FH +   G+ P  V Y+ ++  LC++ + ++A 
Sbjct: 550 ISLDTITYSSIVDVLSREDRIEEAVQMFHAVQDMGMRPKAVMYNKILSALCKRCETDRAI 609

Query: 494 DFLLYMEKNGCAPNVVTFNTLMHGFLQ 520
           DF  +M  N C PN  T+  L+ G  +
Sbjct: 610 DFFAHMVSNSCMPNESTYVILIEGLAR 636



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 138/499 (27%), Positives = 225/499 (45%), Gaps = 66/499 (13%)

Query: 121 GNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRL------ 174
            ++ R L   + + EA  L +   + G  PDV     LI   CR G  S A R+      
Sbjct: 39  SSRLRRLIARDDLAEAARLVERSTSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEG 98

Query: 175 ---------HKKMVSG-------DYENGLISKTNI----FSYSIIIDSLCKEGLVDKAKE 214
                    +  +V+G       D    LI+   +    ++Y+ +I  LC  G V  A  
Sbjct: 99  SGAPVDVFAYNTLVAGYCRYGRLDAARRLIASMPVPPDAYTYTPLIRGLCDRGRVGDALS 158

Query: 215 LFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLC 274
           L  +M  R   P+VV  T L+   C +  + +   +  EM   G  PN++T+NV+I+ +C
Sbjct: 159 LLDDMLRRECQPSVVTYTVLLEAVCKSSGFGQAMKVLDEMRAKGCTPNIVTYNVIINGMC 218

Query: 275 KGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGR--------------------- 313
           +  ++++A  +L  +   G  PD  +Y +++ G C   R                     
Sbjct: 219 REDRVDDARQILNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEVLFCEMVENNCVPNEV 278

Query: 314 --------------IDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQI 359
                         ++ A E+   M   GC       NI+IN  CK   V++A      +
Sbjct: 279 TFDMLVRFFCRGGMVERAIEVLDRMSEHGCTANTTLCNIVINSICKQGRVDDAFEFLNNM 338

Query: 360 ISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCV 419
            S G     I+Y T+L GL +AG+   A++L +EM   N  P+  T+N  I  LC+   +
Sbjct: 339 GSYGCSPDTISYTTVLKGLCRAGRWEDAKELLNEMVRKNCPPNEVTFNTFICILCQKGLI 398

Query: 420 QEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIM 479
            +A+ L   +       GI  +N L++G C  GR+D+A ELF+ LP +   P  +TY+ +
Sbjct: 399 DQAILLIEQMPEYGCSVGIVTYNALVNGFCVQGRVDSALELFNSLPCE---PNTITYTTL 455

Query: 480 IHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPER 539
           + GLC   +L+ A + L  M +N C  NVVTFN L+  F Q     + +EL+ +M   E 
Sbjct: 456 LTGLCHAERLDAAAELLAEMMQNDCPLNVVTFNVLVSFFCQKGFVEEAIELVQQMM--EH 513

Query: 540 NLVPDDTTFSIVVDLLAKD 558
              P+  TF+ ++D + +D
Sbjct: 514 GCTPNLITFNTLLDGITED 532



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 85/306 (27%), Positives = 154/306 (50%), Gaps = 5/306 (1%)

Query: 258 GPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTA 317
           G  P++     +I  LC+ G+ ++A  +L      G   D F YN+L+ GYC  GR+D A
Sbjct: 65  GEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEGSGAPVDVFAYNTLVAGYCRYGRLDAA 124

Query: 318 REIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSG 377
           R +  SM      +T   Y  LI G C    V +A+SL   ++    + +V+TY  LL  
Sbjct: 125 RRLIASMPVPPDAYT---YTPLIRGLCDRGRVGDALSLLDDMLRRECQPSVVTYTVLLEA 181

Query: 378 LFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFG 437
           + ++   G A K+ DEM+     P++ TYN++I+G+C+ + V +A ++ + L    F+  
Sbjct: 182 VCKSSGFGQAMKVLDEMRAKGCTPNIVTYNVIINGMCREDRVDDARQILNRLSSYGFQPD 241

Query: 438 IEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLL 497
              +  ++ GLC A R ++   LF ++ +   VP  VT+ +++   CR G +E+A + L 
Sbjct: 242 TVSYTTVLKGLCAAKRWEDVEVLFCEMVENNCVPNEVTFDMLVRFFCRGGMVERAIEVLD 301

Query: 498 YMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAK 557
            M ++GC  N    N +++   +  +     E L+ M        PD  +++ V+  L +
Sbjct: 302 RMSEHGCTANTTLCNIVINSICKQGRVDDAFEFLNNMG--SYGCSPDTISYTTVLKGLCR 359

Query: 558 DEKYHE 563
             ++ +
Sbjct: 360 AGRWED 365



 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 103/424 (24%), Positives = 187/424 (44%), Gaps = 60/424 (14%)

Query: 56  LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNI 115
           +++AR     ++     P   S+  +   +   + ++ V   + ++V    +P+ +T ++
Sbjct: 223 VDDARQILNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEVLFCEMVENNCVPNEVTFDM 282

Query: 116 LINCF---GNKERGL-------------------------CVENRIKEATWLFKNMIAFG 147
           L+  F   G  ER +                         C + R+ +A     NM ++G
Sbjct: 283 LVRFFCRGGMVERAIEVLDRMSEHGCTANTTLCNIVINSICKQGRVDDAFEFLNNMGSYG 342

Query: 148 VRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDY---------------ENGLISKT- 191
             PD I+Y T++ G CR G    A  L  +MV  +                + GLI +  
Sbjct: 343 CSPDTISYTTVLKGLCRAGRWEDAKELLNEMVRKNCPPNEVTFNTFICILCQKGLIDQAI 402

Query: 192 -------------NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGF 238
                         I +Y+ +++  C +G VD A ELF  +      P  +  TTL+ G 
Sbjct: 403 LLIEQMPEYGCSVGIVTYNALVNGFCVQGRVDSALELFNSLP---CEPNTITYTTLLTGL 459

Query: 239 CCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDR 298
           C A   +    L  EM+      N++TFNV++   C+ G + EA  L++ M++ G  P+ 
Sbjct: 460 CHAERLDAAAELLAEMMQNDCPLNVVTFNVLVSFFCQKGFVEEAIELVQQMMEHGCTPNL 519

Query: 299 FTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQ 358
            T+N+L+DG       + A E+   + SKG     ++Y+ +++   +   +EEA+ ++  
Sbjct: 520 ITFNTLLDGITEDCNSEEALELLHGLVSKGISLDTITYSSIVDVLSREDRIEEAVQMFHA 579

Query: 359 IISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNC 418
           +   G+R   + YN +LS L +  +   A   F  M   +  P+ STY ILI+GL +   
Sbjct: 580 VQDMGMRPKAVMYNKILSALCKRCETDRAIDFFAHMVSNSCMPNESTYVILIEGLAREGL 639

Query: 419 VQEA 422
           ++EA
Sbjct: 640 LKEA 643



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 96/356 (26%), Positives = 161/356 (45%), Gaps = 18/356 (5%)

Query: 39  TQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFY 98
           T  N  ++  CK G   +++A  F   M     SP   S+  +   + +   ++      
Sbjct: 313 TLCNIVINSICKQG--RVDDAFEFLNNMGSYGCSPDTISYTTVLKGLCRAGRWEDAKELL 370

Query: 99  RKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTL 158
            ++V     P+ +T N  I C       LC +  I +A  L + M  +G    ++TY  L
Sbjct: 371 NEMVRKNCPPNEVTFNTFI-CI------LCQKGLIDQAILLIEQMPEYGCSVGIVTYNAL 423

Query: 159 INGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLE 218
           +NGFC  G +  AL L          N L  + N  +Y+ ++  LC    +D A EL  E
Sbjct: 424 VNGFCVQGRVDSALELF---------NSLPCEPNTITYTTLLTGLCHAERLDAAAELLAE 474

Query: 219 MKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGK 278
           M        VV    L+  FC  G  EE   L  +M++ G  PNL+TFN ++D + +   
Sbjct: 475 MMQNDCPLNVVTFNVLVSFFCQKGFVEEAIELVQQMMEHGCTPNLITFNTLLDGITEDCN 534

Query: 279 INEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNI 338
             EA  LL  ++ +G++ D  TY+S++D      RI+ A ++F ++   G +   V YN 
Sbjct: 535 SEEALELLHGLVSKGISLDTITYSSIVDVLSREDRIEEAVQMFHAVQDMGMRPKAVMYNK 594

Query: 339 LINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEM 394
           +++  CK    + A+  +  ++SN       TY  L+ GL + G    A+ +  E+
Sbjct: 595 ILSALCKRCETDRAIDFFAHMVSNSCMPNESTYVILIEGLAREGLLKEARYVLSEL 650


>gi|357494043|ref|XP_003617310.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355518645|gb|AET00269.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 716

 Score =  251 bits (640), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 156/494 (31%), Positives = 256/494 (51%), Gaps = 17/494 (3%)

Query: 75  ISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIK 134
           I++ N L GA+ K    D     Y   V  G + +  TLNI++N        LC + ++ 
Sbjct: 189 INACNALLGAIVKVGWVDLAWKVYEDFVKSGNIVNVYTLNIMVN-------ALCKDGKLD 241

Query: 135 EATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIF 194
                   M   GV  D++TY TL+N +CR G +S A  L   M     + GL      F
Sbjct: 242 NVGVYLSEMEEKGVYADLVTYNTLVNAYCRRGLVSEAFGLVDCMAGKGLKPGL------F 295

Query: 195 SYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEM 254
           +Y+ +I+ LCKEG  ++AK +  EM G G+ P       ++   C   +  E   +F EM
Sbjct: 296 TYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAATFNPMLVESCRKEDVWEAERVFNEM 355

Query: 255 LDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRI 314
           L  G  P+L++F+ ++    + G++  A    E M   GL PD   Y  L++GYC    +
Sbjct: 356 LQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTILINGYCRNDDV 415

Query: 315 DTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTL 374
             A ++   M  +GC   VV+YN L+NG C+   +++A  L+++++  GV     T  TL
Sbjct: 416 SGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGVFPDFYTLTTL 475

Query: 375 LSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFH-MLEMNK 433
           + G  + G    A  LF+ M L +++PD+ TYN L+DG CK   +++A +L++ M+    
Sbjct: 476 IHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKELWYDMISREI 535

Query: 434 FEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKAN 493
           F   I  F+ LI+G C  G +  A+ L+ ++ +KG+ PT+VT + +I G  R G L KAN
Sbjct: 536 FPSYIS-FSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKGYLRAGNLSKAN 594

Query: 494 DFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
           DFL  M   G  P+ +T+NTL++ F++     +   L++ M   ER L+P+  T++ ++ 
Sbjct: 595 DFLNTMISEGVPPDCITYNTLINSFVKEENFDRAFFLINNME--ERGLLPNLVTYNAILG 652

Query: 554 LLAKDEKYHECSAV 567
             ++  +  E   V
Sbjct: 653 GFSRHGRMQEAEMV 666



 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 133/454 (29%), Positives = 232/454 (51%), Gaps = 24/454 (5%)

Query: 123 KERGLCVE--------NRIKEATWL------FKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           ++RG CV           I +  W+      +++ +  G   +V T   ++N  C+ G L
Sbjct: 181 RKRGFCVSINACNALLGAIVKVGWVDLAWKVYEDFVKSGNIVNVYTLNIMVNALCKDGKL 240

Query: 169 -SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPA 227
            +V + L +    G Y        ++ +Y+ ++++ C+ GLV +A  L   M G+G+ P 
Sbjct: 241 DNVGVYLSEMEEKGVY-------ADLVTYNTLVNAYCRRGLVSEAFGLVDCMAGKGLKPG 293

Query: 228 VVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLE 287
           +     LI+G C  G++E    +  EML +G  PN  TFN M+   C+   + EA  +  
Sbjct: 294 LFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAATFNPMLVESCRKEDVWEAERVFN 353

Query: 288 LMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKIL 347
            M+QRG+ PD  +++S++  +   G +  A   F  M   G     V Y ILINGYC+  
Sbjct: 354 EMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTILINGYCRND 413

Query: 348 NVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYN 407
           +V  A+ +  +++  G    V+TYNTLL+GL +      A +LF EM    V PD  T  
Sbjct: 414 DVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGVFPDFYTLT 473

Query: 408 ILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQK 467
            LI G CK+  + +A+ LF  + +   +  +  +N L+DG CK G ++ A EL++ +  +
Sbjct: 474 TLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKELWYDMISR 533

Query: 468 GLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKV 527
            + P+ +++SI+I+G C  G + +A      M++ G  P +VT NT++ G+L+    SK 
Sbjct: 534 EIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKGYLRAGNLSKA 593

Query: 528 VELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKY 561
            + L+ M      + PD  T++ +++   K+E +
Sbjct: 594 NDFLNTMI--SEGVPPDCITYNTLINSFVKEENF 625



 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 144/505 (28%), Positives = 243/505 (48%), Gaps = 54/505 (10%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
           N  ++  C+ G+++  EA      M      P + ++N L   + K   Y+       ++
Sbjct: 263 NTLVNAYCRRGLVS--EAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEM 320

Query: 102 VSIGLLPDFLTLN-ILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLIN 160
           + +GL P+  T N +L+          C +  + EA  +F  M+  GV PD+I++ +++ 
Sbjct: 321 LGVGLCPNAATFNPMLVES--------CRKEDVWEAERVFNEMLQRGVVPDLISFSSIVG 372

Query: 161 GFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMK 220
            F R G L  AL   +KM       GL+  T I  Y+I+I+  C+   V  A ++  EM 
Sbjct: 373 VFSRNGELGRALAYFEKMKGV----GLVPDTVI--YTILINGYCRNDDVSGALKMRNEMV 426

Query: 221 GRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKIN 280
            RG    VV   TL++G C     ++ + LF EM++ G  P+  T   +I   CK G + 
Sbjct: 427 ERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGVFPDFYTLTTLIHGYCKDGNMT 486

Query: 281 EANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILI 340
           +A  L E M  R L PD  TYN+LMDG+C VG ++ A+E++  M S+    + +S++ILI
Sbjct: 487 KALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKELWYDMISREIFPSYISFSILI 546

Query: 341 NGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVE 400
           NG+C +  V EA  L+ ++   G++ T++T NT++ G  +AG    A    + M    V 
Sbjct: 547 NGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKGYLRAGNLSKANDFLNTMISEGVP 606

Query: 401 PDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWEL 460
           PD  TYN                                    LI+   K    D A+ L
Sbjct: 607 PDCITYN-----------------------------------TLINSFVKEENFDRAFFL 631

Query: 461 FHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQ 520
            + + ++GL+P +VTY+ ++ G  R G++++A   L  M   G  P+  T+ +L++G++ 
Sbjct: 632 INNMEERGLLPNLVTYNAILGGFSRHGRMQEAEMVLHKMIDKGINPDKSTYTSLINGYVS 691

Query: 521 NNKTSKVVELLHKMAEPERNLVPDD 545
            +   +   +  +M   +R  VPDD
Sbjct: 692 KDNMKEAFRVHDEML--QRGFVPDD 714



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 108/396 (27%), Positives = 193/396 (48%), Gaps = 37/396 (9%)

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
           +  + ++I +  +   + +  E F  ++ RG   ++  C  L+      G  +    ++ 
Sbjct: 154 VVVFDLLIRTYVQARKLREGSEAFQLLRKRGFCVSINACNALLGAIVKVGWVDLAWKVYE 213

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
           + +  G   N+ T N+M++ LCK GK++     L  M ++G+  D  TYN+L++ YC  G
Sbjct: 214 DFVKSGNIVNVYTLNIMVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRRG 273

Query: 313 RIDTAREIFLSMHSKGCKHTVVSYNILINGYCK---------IL---------------- 347
            +  A  +   M  KG K  + +YN LING CK         +L                
Sbjct: 274 LVSEAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAATFN 333

Query: 348 ----------NVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLY 397
                     +V EA  ++ +++  GV   +I++++++    + G+ G A   F++MK  
Sbjct: 334 PMLVESCRKEDVWEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGV 393

Query: 398 NVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNA 457
            + PD   Y ILI+G C+N+ V  A+K+ + +        +  +N L++GLC+   LD+A
Sbjct: 394 GLVPDTVIYTILINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDA 453

Query: 458 WELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHG 517
            ELF ++ ++G+ P   T + +IHG C+ G + KA      M      P+VVT+NTLM G
Sbjct: 454 DELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDG 513

Query: 518 FLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
           F +  +  K  EL + M    R + P   +FSI+++
Sbjct: 514 FCKVGEMEKAKELWYDMI--SREIFPSYISFSILIN 547



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 71/300 (23%), Positives = 136/300 (45%), Gaps = 19/300 (6%)

Query: 259 PRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAR 318
           P P+++    +I  L +  K+ EA  LL  +I++              G   V  ID+  
Sbjct: 97  PNPSIIA--TLIHFLVQSKKLPEAQSLLLRIIRKS-------------GVSHVEVIDSL- 140

Query: 319 EIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGL 378
            I  S  +      VV +++LI  Y +   + E    ++ +   G   ++   N LL  +
Sbjct: 141 -ISTSSSNLNSNQNVVVFDLLIRTYVQARKLREGSEAFQLLRKRGFCVSINACNALLGAI 199

Query: 379 FQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGI 438
            + G    A K++++        ++ T NI+++ LCK+  +         +E       +
Sbjct: 200 VKVGWVDLAWKVYEDFVKSGNIVNVYTLNIMVNALCKDGKLDNVGVYLSEMEEKGVYADL 259

Query: 439 EIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLY 498
             +N L++  C+ G +  A+ L   +  KGL P + TY+ +I+GLC++G  E+A   L  
Sbjct: 260 VTYNTLVNAYCRRGLVSEAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDE 319

Query: 499 MEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKD 558
           M   G  PN  TFN ++    +     +   + ++M   +R +VPD  +FS +V + +++
Sbjct: 320 MLGVGLCPNAATFNPMLVESCRKEDVWEAERVFNEML--QRGVVPDLISFSSIVGVFSRN 377


>gi|224078588|ref|XP_002305565.1| predicted protein [Populus trichocarpa]
 gi|222848529|gb|EEE86076.1| predicted protein [Populus trichocarpa]
          Length = 757

 Score =  250 bits (639), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 151/436 (34%), Positives = 220/436 (50%), Gaps = 14/436 (3%)

Query: 105 GLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCR 164
           G  PD  T N+L+N       GL     +K A  +   M+  G  PD+ TY +LI+G C+
Sbjct: 296 GFFPDKYTFNMLVN-------GLSKTGHVKHALEVMDMMLREGFDPDIYTYNSLISGLCK 348

Query: 165 TGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGI 224
            G +  A+++  +M+  D         N  +Y+ II +LCKE  V++A +L L + G+GI
Sbjct: 349 LGEVDEAVKVLNQMIERD------CSPNTVTYNTIISTLCKENQVEEATKLALVLTGKGI 402

Query: 225 NPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANG 284
            P V    +LI G C + N      L+ EM   G  P+  T+N++ID LC  GK+ EA  
Sbjct: 403 LPDVCTYNSLIQGLCLSRNHTVAMELYKEMKTKGCHPDEFTYNMLIDSLCFRGKLQEALN 462

Query: 285 LLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYC 344
           LL+ M   G   +  TYN+L+DG+C   RI  A EIF  M  +G     V+YN LI+G C
Sbjct: 463 LLKEMEVSGCARNVITYNTLIDGFCKNKRIAEAEEIFDQMELQGVSRNSVTYNTLIDGLC 522

Query: 345 KILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLS 404
           K   VEEA  L  Q+I  G+R    TYN+LL+   +AG    A  +   M     EPD+ 
Sbjct: 523 KSERVEEASQLMDQMIMEGLRPDKFTYNSLLTYFCKAGDIKKAADIVQTMASDGCEPDIV 582

Query: 405 TYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKL 464
           TY  LI GLCK   V+ A KL   ++M         +N +I  L +  R   A  LF ++
Sbjct: 583 TYGTLIAGLCKAGRVEAATKLLRTIQMKGINLTPHAYNPVIQALFRRKRSKEAVRLFREM 642

Query: 465 PQKGLVPTVVTYSIMIHGLCR-KGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNK 523
            +K   P  VTY I+  GLC+  G + +A DF++ M + G  P   +F  L  G      
Sbjct: 643 IEKAEAPDAVTYKIVFRGLCQGGGPIGEAVDFVMEMLERGYVPEFSSFYMLAEGLFSLAM 702

Query: 524 TSKVVELLHKMAEPER 539
              +++L+  + E  +
Sbjct: 703 VGTLIKLIDMVMEKAK 718



 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 153/520 (29%), Positives = 256/520 (49%), Gaps = 52/520 (10%)

Query: 75  ISSFNLLFGAVAKNRHYDAVISF-------------YRKLVSIGLLPDFLTLNILINCFG 121
           + +  + FG VA    Y+ +++              +  +VS G+ PD  T NILI    
Sbjct: 147 VDAMEVEFGVVANTHFYNFLLNVLVDGNKLKLVEIAHSNMVSRGIRPDVSTFNILI---- 202

Query: 122 NKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVS- 180
              + LC  ++I+ A  L + M  FG+ PD  T+ T++ GF   GNL  A+R+ ++MV  
Sbjct: 203 ---KALCRAHQIRPAILLMEEMEDFGLLPDEKTFTTIMQGFIEEGNLDGAMRVKEQMVEA 259

Query: 181 -------------------GDYENGL--ISKTNI--------FSYSIIIDSLCKEGLVDK 211
                              G  E  L  I + ++        ++++++++ L K G V  
Sbjct: 260 GCVVTNVTVNVLVNGFCKEGRIEEALRFIEEMSLREGFFPDKYTFNMLVNGLSKTGHVKH 319

Query: 212 AKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMID 271
           A E+   M   G +P +    +LI G C  G  +E   +  +M++    PN +T+N +I 
Sbjct: 320 ALEVMDMMLREGFDPDIYTYNSLISGLCKLGEVDEAVKVLNQMIERDCSPNTVTYNTIIS 379

Query: 272 CLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKH 331
            LCK  ++ EA  L  ++  +G+ PD  TYNSL+ G CL      A E++  M +KGC  
Sbjct: 380 TLCKENQVEEATKLALVLTGKGILPDVCTYNSLIQGLCLSRNHTVAMELYKEMKTKGCHP 439

Query: 332 TVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLF 391
              +YN+LI+  C    ++EA++L +++  +G  + VITYNTL+ G  +  +   A+++F
Sbjct: 440 DEFTYNMLIDSLCFRGKLQEALNLLKEMEVSGCARNVITYNTLIDGFCKNKRIAEAEEIF 499

Query: 392 DEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKA 451
           D+M+L  V  +  TYN LIDGLCK+  V+EA +L   + M         +N L+   CKA
Sbjct: 500 DQMELQGVSRNSVTYNTLIDGLCKSERVEEASQLMDQMIMEGLRPDKFTYNSLLTYFCKA 559

Query: 452 GRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTF 511
           G +  A ++   +   G  P +VTY  +I GLC+ G++E A   L  ++  G       +
Sbjct: 560 GDIKKAADIVQTMASDGCEPDIVTYGTLIAGLCKAGRVEAATKLLRTIQMKGINLTPHAY 619

Query: 512 NTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIV 551
           N ++    +  ++ + V L  +M E      PD  T+ IV
Sbjct: 620 NPVIQALFRRKRSKEAVRLFREMIEKAE--APDAVTYKIV 657



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 124/411 (30%), Positives = 191/411 (46%), Gaps = 20/411 (4%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CK G   ++EA      M     SP   ++N +   + K    +        L   G+LP
Sbjct: 347 CKLG--EVDEAVKVLNQMIERDCSPNTVTYNTIISTLCKENQVEEATKLALVLTGKGILP 404

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           D  T N LI       +GLC+      A  L+K M   G  PD  TY  LI+  C  G L
Sbjct: 405 DVCTYNSLI-------QGLCLSRNHTVAMELYKEMKTKGCHPDEFTYNMLIDSLCFRGKL 457

Query: 169 SVALRLHKKM-VSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPA 227
             AL L K+M VSG          N+ +Y+ +ID  CK   + +A+E+F +M+ +G++  
Sbjct: 458 QEALNLLKEMEVSG-------CARNVITYNTLIDGFCKNKRIAEAEEIFDQMELQGVSRN 510

Query: 228 VVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLE 287
            V   TLI G C +   EE + L  +M+  G RP+  T+N ++   CK G I +A  +++
Sbjct: 511 SVTYNTLIDGLCKSERVEEASQLMDQMIMEGLRPDKFTYNSLLTYFCKAGDIKKAADIVQ 570

Query: 288 LMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKIL 347
            M   G  PD  TY +L+ G C  GR++ A ++  ++  KG   T  +YN +I    +  
Sbjct: 571 TMASDGCEPDIVTYGTLIAGLCKAGRVEAATKLLRTIQMKGINLTPHAYNPVIQALFRRK 630

Query: 348 NVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQA-GYAQKLFDEMKLYNVEPDLSTY 406
             +EA+ L+R++I        +TY  +  GL Q G   G A     EM      P+ S++
Sbjct: 631 RSKEAVRLFREMIEKAEAPDAVTYKIVFRGLCQGGGPIGEAVDFVMEMLERGYVPEFSSF 690

Query: 407 NILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNA 457
            +L +GL     V   +KL  M+ M K +F       +I G  K  +  +A
Sbjct: 691 YMLAEGLFSLAMVGTLIKLIDMV-MEKAKFSDNEVT-MIRGFLKISKYQDA 739



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 128/432 (29%), Positives = 216/432 (50%), Gaps = 9/432 (2%)

Query: 182 DYENGLISKTNIFSY--SIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFC 239
           + E G+++ T+ +++  ++++D   K  LV+ A      M  RGI P V     LI   C
Sbjct: 151 EVEFGVVANTHFYNFLLNVLVDG-NKLKLVEIAHS---NMVSRGIRPDVSTFNILIKALC 206

Query: 240 CAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRF 299
            A        L  EM D G  P+  TF  ++    + G ++ A  + E M++ G      
Sbjct: 207 RAHQIRPAILLMEEMEDFGLLPDEKTFTTIMQGFIEEGNLDGAMRVKEQMVEAGCVVTNV 266

Query: 300 TYNSLMDGYCLVGRIDTAREIFLSMH-SKGCKHTVVSYNILINGYCKILNVEEAMSLYRQ 358
           T N L++G+C  GRI+ A      M   +G      ++N+L+NG  K  +V+ A+ +   
Sbjct: 267 TVNVLVNGFCKEGRIEEALRFIEEMSLREGFFPDKYTFNMLVNGLSKTGHVKHALEVMDM 326

Query: 359 IISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNC 418
           ++  G    + TYN+L+SGL + G+   A K+ ++M   +  P+  TYN +I  LCK N 
Sbjct: 327 MLREGFDPDIYTYNSLISGLCKLGEVDEAVKVLNQMIERDCSPNTVTYNTIISTLCKENQ 386

Query: 419 VQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSI 478
           V+EA KL  +L        +  +N LI GLC +     A EL+ ++  KG  P   TY++
Sbjct: 387 VEEATKLALVLTGKGILPDVCTYNSLIQGLCLSRNHTVAMELYKEMKTKGCHPDEFTYNM 446

Query: 479 MIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPE 538
           +I  LC +GKL++A + L  ME +GCA NV+T+NTL+ GF +N + ++  E+  +M    
Sbjct: 447 LIDSLCFRGKLQEALNLLKEMEVSGCARNVITYNTLIDGFCKNKRIAEAEEIFDQME--L 504

Query: 539 RNLVPDDTTFSIVVDLLAKDEKYHECSAVSKSSYRACLYVTIFQPSSLGSMIGCTVRLMP 598
           + +  +  T++ ++D L K E+  E S +        L    F  +SL +       +  
Sbjct: 505 QGVSRNSVTYNTLIDGLCKSERVEEASQLMDQMIMEGLRPDKFTYNSLLTYFCKAGDIKK 564

Query: 599 QPEMSDTLGDDG 610
             ++  T+  DG
Sbjct: 565 AADIVQTMASDG 576


>gi|413952239|gb|AFW84888.1| hypothetical protein ZEAMMB73_407218 [Zea mays]
          Length = 668

 Score =  250 bits (639), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 143/488 (29%), Positives = 252/488 (51%), Gaps = 23/488 (4%)

Query: 77  SFNLLFGAVAKNRHYDAVISFYRKLV-SIGLLPDFLTLNILINCFGNKERGLCVENRIKE 135
           ++N L     +  H DA     R+L+ S+ + PD  T   LI       R LC   R+ +
Sbjct: 112 AYNTLVAGYCRYGHLDAA----RRLIGSMPVAPDAYTYTPLI-------RVLCDRGRVAD 160

Query: 136 ATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFS 195
           A  L  +M+  G +P+V+TY  L+   C+      A+ +  +M +           NI +
Sbjct: 161 ALSLLDDMLRRGCQPNVVTYTVLLEAMCKNSGFEQAMAVLDEMRAKG------CTPNIVT 214

Query: 196 YSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEML 255
           Y++II+ +C+EG VD A++L   +   G  P  V  TTL+ G C +  W++V  LF EM+
Sbjct: 215 YNVIINGMCREGRVDDARDLLNRLFSYGCQPDTVSYTTLLKGLCASKRWDDVEELFAEMM 274

Query: 256 DLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRID 315
           +    PN +TF+++I   C+GG +  A  +L+ M +     +    N +++  C  GR+D
Sbjct: 275 EKNCMPNEVTFDMLIRFFCRGGMVERAIQVLQQMTEHECATNTTLCNIVINSICKQGRVD 334

Query: 316 TAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLL 375
            A +   +M S GC    +SY  ++ G C+     +A  L ++++ N      +T+NT +
Sbjct: 335 DAFKFLNNMGSYGCNPDTISYTTVLKGLCRAERWNDAKELLKEMVRNNCPPNEVTFNTFI 394

Query: 376 SGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFE 435
             L Q G    A  L ++M+ +     + TYN L++G C    +  A++LF  +      
Sbjct: 395 CILCQKGLIEQAIMLIEQMQEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSMPCKPNT 454

Query: 436 FGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDF 495
                +  L+ GLC A RLD A EL  ++  +   P VVT++++++  C+KG L++A + 
Sbjct: 455 I---TYTTLLTGLCNAERLDAAAELVAEMLHRDCPPNVVTFNVLVNFFCQKGFLDEAIEL 511

Query: 496 LLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLL 555
           +  M ++GC PN++T+NTL  G  ++  +   +ELLH +    + + PD  TFS ++ +L
Sbjct: 512 VEQMMEHGCTPNLITYNTLFDGITKDCSSEDALELLHGLVS--KGVSPDVITFSSIIGIL 569

Query: 556 AKDEKYHE 563
           +K+++  E
Sbjct: 570 SKEDRVEE 577



 Score =  238 bits (607), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 143/495 (28%), Positives = 244/495 (49%), Gaps = 51/495 (10%)

Query: 72  SPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVEN 131
            P + ++ +L  A+ KN  ++  ++   ++ + G  P+ +T N++IN       G+C E 
Sbjct: 174 QPNVVTYTVLLEAMCKNSGFEQAMAVLDEMRAKGCTPNIVTYNVIIN-------GMCREG 226

Query: 132 RIKEATWLFKNMIAFGVRPDVITYGTLING------------------------------ 161
           R+ +A  L   + ++G +PD ++Y TL+ G                              
Sbjct: 227 RVDDARDLLNRLFSYGCQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFD 286

Query: 162 -----FCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELF 216
                FCR G +  A+++ ++M   +        TN    +I+I+S+CK+G VD A +  
Sbjct: 287 MLIRFFCRGGMVERAIQVLQQMTEHE------CATNTTLCNIVINSICKQGRVDDAFKFL 340

Query: 217 LEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKG 276
             M   G NP  +  TT++ G C A  W +   L  EM+     PN +TFN  I  LC+ 
Sbjct: 341 NNMGSYGCNPDTISYTTVLKGLCRAERWNDAKELLKEMVRNNCPPNEVTFNTFICILCQK 400

Query: 277 GKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSY 336
           G I +A  L+E M + G      TYN+L++G+C+ G ID+A E+F SM    CK   ++Y
Sbjct: 401 GLIEQAIMLIEQMQEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSMP---CKPNTITY 457

Query: 337 NILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKL 396
             L+ G C    ++ A  L  +++       V+T+N L++   Q G    A +L ++M  
Sbjct: 458 TTLLTGLCNAERLDAAAELVAEMLHRDCPPNVVTFNVLVNFFCQKGFLDEAIELVEQMME 517

Query: 397 YNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDN 456
           +   P+L TYN L DG+ K+   ++A++L H L        +  F+ +I  L K  R++ 
Sbjct: 518 HGCTPNLITYNTLFDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGILSKEDRVEE 577

Query: 457 AWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMH 516
           A ++FH     G+ P  + Y+ ++ GLC++ +++ A DFL YM  NGC PN  T+  L+ 
Sbjct: 578 AIQMFHLAQDIGMRPKALVYNKILLGLCKRHEIDNAIDFLAYMVSNGCMPNESTYIILIE 637

Query: 517 GFLQNNKTSKVVELL 531
           G  +     +  +LL
Sbjct: 638 GLAREGLLKEAQDLL 652



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 105/370 (28%), Positives = 187/370 (50%), Gaps = 8/370 (2%)

Query: 167 NLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINP 226
           +L+ A RL +   S D E       +++  + +I +LC+ G    A  +    +G G   
Sbjct: 54  DLAGAARLVELSASRDGE-----APDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPV 108

Query: 227 AVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLL 286
            V    TL+ G+C  G+ +    L   M      P+  T+  +I  LC  G++ +A  LL
Sbjct: 109 DVFAYNTLVAGYCRYGHLDAARRLIGSM---PVAPDAYTYTPLIRVLCDRGRVADALSLL 165

Query: 287 ELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKI 346
           + M++RG  P+  TY  L++  C     + A  +   M +KGC   +V+YN++ING C+ 
Sbjct: 166 DDMLRRGCQPNVVTYTVLLEAMCKNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCRE 225

Query: 347 LNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTY 406
             V++A  L  ++ S G +   ++Y TLL GL  + +    ++LF EM   N  P+  T+
Sbjct: 226 GRVDDARDLLNRLFSYGCQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTF 285

Query: 407 NILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQ 466
           ++LI   C+   V+ A+++   +  ++      + N +I+ +CK GR+D+A++  + +  
Sbjct: 286 DMLIRFFCRGGMVERAIQVLQQMTEHECATNTTLCNIVINSICKQGRVDDAFKFLNNMGS 345

Query: 467 KGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSK 526
            G  P  ++Y+ ++ GLCR  +   A + L  M +N C PN VTFNT +    Q     +
Sbjct: 346 YGCNPDTISYTTVLKGLCRAERWNDAKELLKEMVRNNCPPNEVTFNTFICILCQKGLIEQ 405

Query: 527 VVELLHKMAE 536
            + L+ +M E
Sbjct: 406 AIMLIEQMQE 415



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 116/445 (26%), Positives = 197/445 (44%), Gaps = 62/445 (13%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
           N  ++  C+ G   +++AR     +      P   S+  L   +  ++ +D V   + ++
Sbjct: 216 NVIINGMCREG--RVDDARDLLNRLFSYGCQPDTVSYTTLLKGLCASKRWDDVEELFAEM 273

Query: 102 VSIGLLPDFLTLNILINCF---GNKERGL-------------------------CVENRI 133
           +    +P+ +T ++LI  F   G  ER +                         C + R+
Sbjct: 274 MEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLQQMTEHECATNTTLCNIVINSICKQGRV 333

Query: 134 KEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDY---------- 183
            +A     NM ++G  PD I+Y T++ G CR    + A  L K+MV  +           
Sbjct: 334 DDAFKFLNNMGSYGCNPDTISYTTVLKGLCRAERWNDAKELLKEMVRNNCPPNEVTFNTF 393

Query: 184 -----ENGLISKT--------------NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGI 224
                + GLI +                + +Y+ +++  C +G +D A ELF  M  +  
Sbjct: 394 ICILCQKGLIEQAIMLIEQMQEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSMPCK-- 451

Query: 225 NPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANG 284
            P  +  TTL+ G C A   +    L  EML     PN++TFNV+++  C+ G ++EA  
Sbjct: 452 -PNTITYTTLLTGLCNAERLDAAAELVAEMLHRDCPPNVVTFNVLVNFFCQKGFLDEAIE 510

Query: 285 LLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYC 344
           L+E M++ G  P+  TYN+L DG       + A E+   + SKG    V++++ +I    
Sbjct: 511 LVEQMMEHGCTPNLITYNTLFDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGILS 570

Query: 345 KILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLS 404
           K   VEEA+ ++      G+R   + YN +L GL +  +   A      M      P+ S
Sbjct: 571 KEDRVEEAIQMFHLAQDIGMRPKALVYNKILLGLCKRHEIDNAIDFLAYMVSNGCMPNES 630

Query: 405 TYNILIDGLCKNNCVQEAVKLFHML 429
           TY ILI+GL +   ++EA  L  ML
Sbjct: 631 TYIILIEGLAREGLLKEAQDLLSML 655


>gi|302756537|ref|XP_002961692.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
 gi|300170351|gb|EFJ36952.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
          Length = 1056

 Score =  250 bits (639), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 163/546 (29%), Positives = 259/546 (47%), Gaps = 52/546 (9%)

Query: 55  NLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTL- 113
           NL  A  FF  M     SP   +++ L   + K    D  +   R   S   +  F +L 
Sbjct: 226 NLTGAYEFFDSMPQTGVSPNTVTYDALIDGLCKAGKLDIALGLLRDKNSQAGMFAFSSLL 285

Query: 114 -------------NIL--------INCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDV 152
                         +L        + CF +   GLC   R+ EA  LF  M   G   DV
Sbjct: 286 HGLCQAHRLEEAIQLLKAMPCVPNVVCFNSLMNGLCQARRVDEAFELFDVMKESGCSADV 345

Query: 153 ITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKA 212
           ITY  L+ G C+   +  A R  + M   +         N+ ++S +I  LC  G V++A
Sbjct: 346 ITYNILLKGLCKLRRIPEAYRHVELMRRTEG-----CSPNVVTFSTLIQGLCNAGRVNQA 400

Query: 213 KELFLEMKG-RGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDL-----------GP- 259
            E++  M    GI+P       L+ G C AG+   +   F +ML+             P 
Sbjct: 401 WEVYERMVAVEGISPNRFTYAFLLEGLCKAGDSRRLEQCFEQMLEREWRSSSSWPIHSPE 460

Query: 260 ---------RPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCL 310
                    RP L+T+N ++  L K G + +A GLLE MI+ GL+PD  T+NS++DG C 
Sbjct: 461 VDFLMVQVCRPTLVTYNTLVTGLSKSGMVRDALGLLEFMIESGLSPDVITFNSVLDGLCK 520

Query: 311 VGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVIT 370
             RI  A  +F     +GC+  VV+Y+ LI+G  K+  ++EA+ L  +++  G R   +T
Sbjct: 521 EQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVT 580

Query: 371 YNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLE 430
           Y+T++ GL + G+   A  +  +M+     PD  TYN LIDG  K   ++EAV L   + 
Sbjct: 581 YSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREML 640

Query: 431 MNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLE 490
              F   +  +  L  GLC++GR D A E+   +  +G  P  +TYS ++ GLC+ G++ 
Sbjct: 641 EAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVT 700

Query: 491 KANDFLLYMEKNG-CAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFS 549
           +A  +   M ++   AP+V+ ++ L+ G  +  +  +  E L +M    R  +PD  TFS
Sbjct: 701 EALGYFEKMARDEVVAPHVIAYSALIDGLCKAGRIDEAYEFLERMIRAGR--IPDVVTFS 758

Query: 550 IVVDLL 555
           I+++ L
Sbjct: 759 ILINGL 764



 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 148/519 (28%), Positives = 242/519 (46%), Gaps = 52/519 (10%)

Query: 51   SGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAK-NRHYDAVISFYRKLVSIGLLPD 109
            S +  ++EA      M  +       +++ +   + K  R  DAV+   R++   G LPD
Sbjct: 554  SKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVL-RQMRDAGCLPD 612

Query: 110  FLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLS 169
             +T N LI+ F  ++R       ++EA  L + M+  G  P V+TY TL +G CR+G   
Sbjct: 613  AVTYNTLIDGFFKRQR-------LREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFD 665

Query: 170  VALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEM-KGRGINPAV 228
             A+ +       DY        N  +YS I+D LCK G V +A   F +M +   + P V
Sbjct: 666  EAVEIL------DYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHV 719

Query: 229  VVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLEL 288
            +  + LI G C AG  +E       M+  G  P+++TF+++I+ LC  G+I+    L   
Sbjct: 720  IAYSALIDGLCKAGRIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFCG 779

Query: 289  MIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKG-CKHTV-------------- 333
            M +RG   D + YN++++ YCL G    A  +   M + G  K+TV              
Sbjct: 780  MAERGCKADIYAYNAMINAYCLKGEFSAAYALLEEMKTHGIAKNTVTHGIVIKALCGNDR 839

Query: 334  ------------------VSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLL 375
                              +SYN LI         E+A+ L R ++++G       Y T++
Sbjct: 840  IDEAVSYFHSIPEDCRDEISYNTLITSLVASRRSEQALELLRAMVADGGSPDACNYMTVM 899

Query: 376  SGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFE 435
             GLF+AG    A KL  EM+     PDL TY I+I GL K   +  A   F  +     +
Sbjct: 900  DGLFKAGSPEVAAKLLQEMRSRGHSPDLRTYTIMISGLSKAKQLPLACDYFEEMLRKNLK 959

Query: 436  FGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDF 495
                +++ LID  CKA ++D+AW+L   L   G+ PT+  YS M+  LC+    +KA + 
Sbjct: 960  PDAIVYSSLIDAFCKADKVDDAWKL---LRSSGIEPTITMYSTMVDSLCKNRGTDKALEV 1016

Query: 496  LLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKM 534
            +  M+   C P +  + +L   ++   +  + V+L++ +
Sbjct: 1017 IREMKSKNCEPGIHIWTSLATAYVAEGRVDEAVKLVNDL 1055



 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 154/536 (28%), Positives = 250/536 (46%), Gaps = 55/536 (10%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
           P + ++N L   ++K+      +     ++  GL PD +T N +++       GLC E R
Sbjct: 471 PTLVTYNTLVTGLSKSGMVRDALGLLEFMIESGLSPDVITFNSVLD-------GLCKEQR 523

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
           I +A  +FK  +  G RP+V+TY TLI+G  +   +  AL+L  KMV       L  + N
Sbjct: 524 ILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVE------LGCRAN 577

Query: 193 IFSYSIIIDSLCKEG--------------------------LVD---------KAKELFL 217
             +YS ++D L K G                          L+D         +A  L  
Sbjct: 578 TVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLR 637

Query: 218 EMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGG 277
           EM   G +P+VV  TTL HG C +G ++E   +   M   G  PN +T++ ++D LCK G
Sbjct: 638 EMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAG 697

Query: 278 KINEANGLLELMIQ-RGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSY 336
           ++ EA G  E M +   + P    Y++L+DG C  GRID A E    M   G    VV++
Sbjct: 698 RVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGRIDEAYEFLERMIRAGRIPDVVTF 757

Query: 337 NILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKL 396
           +ILING C    ++  + L+  +   G +  +  YN +++     G+   A  L +EMK 
Sbjct: 758 SILINGLCDAGRIDTGLELFCGMAERGCKADIYAYNAMINAYCLKGEFSAAYALLEEMKT 817

Query: 397 YNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEI-FNCLIDGLCKAGRLD 455
           + +  +  T+ I+I  LC N+ + EAV  FH +  +  +   EI +N LI  L  + R +
Sbjct: 818 HGIAKNTVTHGIVIKALCGNDRIDEAVSYFHSIPEDCRD---EISYNTLITSLVASRRSE 874

Query: 456 NAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLM 515
            A EL   +   G  P    Y  ++ GL + G  E A   L  M   G +P++ T+  ++
Sbjct: 875 QALELLRAMVADGGSPDACNYMTVMDGLFKAGSPEVAAKLLQEMRSRGHSPDLRTYTIMI 934

Query: 516 HGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKSS 571
            G  +  +     +   +M    +NL PD   +S ++D   K +K  +   + +SS
Sbjct: 935 SGLSKAKQLPLACDYFEEML--RKNLKPDAIVYSSLIDAFCKADKVDDAWKLLRSS 988



 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 168/555 (30%), Positives = 267/555 (48%), Gaps = 74/555 (13%)

Query: 77  SFNLLFGAVAK-NRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKE 135
           ++N+L   + K  R  DA  +F RK +  G  P  +T + +I+       GLC +N + +
Sbjct: 3   TYNVLINGLCKAGRVCDAFTAF-RKAIQFGFRPTVVTYSTVID-------GLCRDNEVDK 54

Query: 136 ATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFS 195
              L + M   G  P+ +TY TL+N     G    A  L ++M +    NG      + +
Sbjct: 55  GCKLLEEMAGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAA----NG--CPPELIT 108

Query: 196 YSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEML 255
           + +II  LCKEG ++ A  +  EM  RG  P V + T L+H  C  G  +E    F ++L
Sbjct: 109 FGLIIKGLCKEGEIEAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVL 168

Query: 256 DLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRID 315
            +G  P+ +T+N M+D L K G++  A  +L+L+ +   +P  FT+   +DG    G + 
Sbjct: 169 LIGFTPDAVTYNTMVDGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLT 228

Query: 316 TAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIIS-----------NGV 364
            A E F SM   G     V+Y+ LI+G CK   ++ A+ L R   S           +G+
Sbjct: 229 GAYEFFDSMPQTGVSPNTVTYDALIDGLCKAGKLDIALGLLRDKNSQAGMFAFSSLLHGL 288

Query: 365 RQT------------------VITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTY 406
            Q                   V+ +N+L++GL QA +   A +LFD MK      D+ TY
Sbjct: 289 CQAHRLEEAIQLLKAMPCVPNVVCFNSLMNGLCQARRVDEAFELFDVMKESGCSADVITY 348

Query: 407 NILIDGLCKNNCVQEAVKLFHMLEMNKFEF---GIEIFNCLIDGLCKAGRLDNAWELFHK 463
           NIL+ GLCK   + EA +  H+  M + E     +  F+ LI GLC AGR++ AWE++ +
Sbjct: 349 NILLKGLCKLRRIPEAYR--HVELMRRTEGCSPNVVTFSTLIQGLCNAGRVNQAWEVYER 406

Query: 464 L-PQKGLVPTVVTYSIMIHGLCRKG---KLEKANDFLLYMEKNG---------------- 503
           +   +G+ P   TY+ ++ GLC+ G   +LE+  + +L  E                   
Sbjct: 407 MVAVEGISPNRFTYAFLLEGLCKAGDSRRLEQCFEQMLEREWRSSSSWPIHSPEVDFLMV 466

Query: 504 --CAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKY 561
             C P +VT+NTL+ G  ++      + LL  M E    L PD  TF+ V+D L K+++ 
Sbjct: 467 QVCRPTLVTYNTLVTGLSKSGMVRDALGLLEFMIES--GLSPDVITFNSVLDGLCKEQRI 524

Query: 562 HECSAVSKSSY-RAC 575
            +   V K +  R C
Sbjct: 525 LDAHNVFKRALERGC 539



 Score =  219 bits (557), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 133/496 (26%), Positives = 235/496 (47%), Gaps = 50/496 (10%)

Query: 73   PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
            P + +++ L   ++K    D  +    K+V +G   + +T + +++       GL    R
Sbjct: 541  PNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVD-------GLLKVGR 593

Query: 133  IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
            +++A  + + M   G  PD +TY TLI+GF +   L  A+ L ++M+   +        +
Sbjct: 594  MEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFH------PS 647

Query: 193  IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
            + +Y+ +   LC+ G  D+A E+   M  RG  P  +  ++++ G C AG   E  G F 
Sbjct: 648  VVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFE 707

Query: 253  EML-DLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
            +M  D    P+++ ++ +ID LCK G+I+EA   LE MI+ G  PD  T++ L++G C  
Sbjct: 708  KMARDEVVAPHVIAYSALIDGLCKAGRIDEAYEFLERMIRAGRIPDVVTFSILINGLCDA 767

Query: 312  GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVIT- 370
            GRIDT  E+F  M  +GCK  + +YN +IN YC       A +L  ++ ++G+ +  +T 
Sbjct: 768  GRIDTGLELFCGMAERGCKADIYAYNAMINAYCLKGEFSAAYALLEEMKTHGIAKNTVTH 827

Query: 371  --------------------------------YNTLLSGLFQAGQAGYAQKLFDEMKLYN 398
                                            YNTL++ L  + ++  A +L   M    
Sbjct: 828  GIVIKALCGNDRIDEAVSYFHSIPEDCRDEISYNTLITSLVASRRSEQALELLRAMVADG 887

Query: 399  VEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAW 458
              PD   Y  ++DGL K    + A KL   +        +  +  +I GL KA +L  A 
Sbjct: 888  GSPDACNYMTVMDGLFKAGSPEVAAKLLQEMRSRGHSPDLRTYTIMISGLSKAKQLPLAC 947

Query: 459  ELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGF 518
            + F ++ +K L P  + YS +I   C   K +K +D    +  +G  P +  ++T++   
Sbjct: 948  DYFEEMLRKNLKPDAIVYSSLIDAFC---KADKVDDAWKLLRSSGIEPTITMYSTMVDSL 1004

Query: 519  LQNNKTSKVVELLHKM 534
             +N  T K +E++ +M
Sbjct: 1005 CKNRGTDKALEVIREM 1020



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 102/336 (30%), Positives = 171/336 (50%), Gaps = 8/336 (2%)

Query: 228 VVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLE 287
           +V    LI+G C AG   +    F + +  G RP ++T++ +ID LC+  ++++   LLE
Sbjct: 1   MVTYNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLE 60

Query: 288 LMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKIL 347
            M  RG  P+  TYN+L++     GR   A  +   M + GC   ++++ ++I G CK  
Sbjct: 61  EMAGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEG 120

Query: 348 NVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYN 407
            +E A  +  +++  G    V  +  LL  L + G+   A   F ++ L    PD  TYN
Sbjct: 121 EIEAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYN 180

Query: 408 ILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQK 467
            ++DGL K   ++ A  +  +L  +     +  F   +DGL KAG L  A+E F  +PQ 
Sbjct: 181 TMVDGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQT 240

Query: 468 GLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKV 527
           G+ P  VTY  +I GLC+ GKL+ A    L  +KN  A  +  F++L+HG  Q ++  + 
Sbjct: 241 GVSPNTVTYDALIDGLCKAGKLDIA--LGLLRDKNSQA-GMFAFSSLLHGLCQAHRLEEA 297

Query: 528 VELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
           ++LL  M       VP+   F+ +++ L +  +  E
Sbjct: 298 IQLLKAMP-----CVPNVVCFNSLMNGLCQARRVDE 328



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 106/383 (27%), Positives = 173/383 (45%), Gaps = 21/383 (5%)

Query: 49   CKSGIINLNEARYFFGYMTHMQP-SPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLL 107
            CK+G   + EA  +F  M   +  +P + +++ L   + K    D    F  +++  G +
Sbjct: 694  CKAG--RVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGRIDEAYEFLERMIRAGRI 751

Query: 108  PDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGN 167
            PD +T +ILIN       GLC   RI     LF  M   G + D+  Y  +IN +C  G 
Sbjct: 752  PDVVTFSILIN-------GLCDAGRIDTGLELFCGMAERGCKADIYAYNAMINAYCLKGE 804

Query: 168  LSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPA 227
             S A  L ++M +    +G+    N  ++ I+I +LC    +D+A   F  +     +  
Sbjct: 805  FSAAYALLEEMKT----HGI--AKNTVTHGIVIKALCGNDRIDEAVSYFHSIPEDCRDE- 857

Query: 228  VVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLE 287
             +   TLI     +   E+   L   M+  G  P+   +  ++D L K G    A  LL+
Sbjct: 858  -ISYNTLITSLVASRRSEQALELLRAMVADGGSPDACNYMTVMDGLFKAGSPEVAAKLLQ 916

Query: 288  LMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKIL 347
             M  RG +PD  TY  ++ G     ++  A + F  M  K  K   + Y+ LI+ +CK  
Sbjct: 917  EMRSRGHSPDLRTYTIMISGLSKAKQLPLACDYFEEMLRKNLKPDAIVYSSLIDAFCKAD 976

Query: 348  NVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYN 407
             V++A  L R   S+G+  T+  Y+T++  L +      A ++  EMK  N EP +  + 
Sbjct: 977  KVDDAWKLLR---SSGIEPTITMYSTMVDSLCKNRGTDKALEVIREMKSKNCEPGIHIWT 1033

Query: 408  ILIDGLCKNNCVQEAVKLFHMLE 430
             L         V EAVKL + L+
Sbjct: 1034 SLATAYVAEGRVDEAVKLVNDLQ 1056


>gi|218197600|gb|EEC80027.1| hypothetical protein OsI_21710 [Oryza sativa Indica Group]
          Length = 694

 Score =  249 bits (637), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 148/452 (32%), Positives = 247/452 (54%), Gaps = 29/452 (6%)

Query: 72  SPPISSFNLLFGAVAKNRHYDAVISFYRKLVSI----GLLPDFLTLNILINCFGNKERGL 127
           +P + ++N +  A++     DA +   R+ +S     G+ P+  T NIL+       R L
Sbjct: 115 APSVPAYNAVLLALS-----DASLPSARRFLSSMLRHGVAPNVYTYNILV-------RAL 162

Query: 128 CVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGL 187
           C   R++EA  +  +M   G  P+ +TY TL+  FCR G L  A    +++VS   E G 
Sbjct: 163 CARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGA----ERVVSLMREEG- 217

Query: 188 ISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEV 247
            +K N+ +++ +++ LCK G ++ A+++F EM   G+ P VV   TL+ G+C  G   E 
Sbjct: 218 NAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHES 277

Query: 248 NGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDG 307
             +F EM   G  P+++TF  +I   CK G + +A  L+  M +RGL  +  T+ +L+DG
Sbjct: 278 LAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDG 337

Query: 308 YCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQT 367
           +C  G +D A      M   G + +VV YN LINGYCK+  ++ A  L R++ +  V+  
Sbjct: 338 FCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPD 397

Query: 368 VITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFH 427
           V+TY+T++SG  + G    A +L  +M    V PD  TY+ LI GLC+   + +A +LF 
Sbjct: 398 VVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFE 457

Query: 428 MLEMNKFEFGIE----IFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGL 483
               N  + G++     +  LIDG CK G ++ A  L  ++ +KG++P VVTYS++I+GL
Sbjct: 458 ----NMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGL 513

Query: 484 CRKGKLEKANDFLLYMEKNGCAPNVVTFNTLM 515
            +  + ++A+  L  +      P+ + ++ LM
Sbjct: 514 SKSARTKEAHRLLFKLYHEDPVPDNIKYDALM 545



 Score =  224 bits (572), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 118/373 (31%), Positives = 209/373 (56%), Gaps = 3/373 (0%)

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
           N+++Y+I++ +LC  G +++A  +  +M+G G  P  V   TL+  FC AG  +    + 
Sbjct: 151 NVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVV 210

Query: 252 IEMLDLG-PRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCL 310
             M + G  +PNL+TFN M++ LCK G++  A  + + M++ GL PD  +YN+L+ GYC 
Sbjct: 211 SLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCK 270

Query: 311 VGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVIT 370
           VG +  +  +F  M  +G    VV++  LI+  CK  N+E+A++L  Q+   G+R   +T
Sbjct: 271 VGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVT 330

Query: 371 YNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLE 430
           +  L+ G  + G    A    +EM+   ++P +  YN LI+G CK   +  A +L   +E
Sbjct: 331 FTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREME 390

Query: 431 MNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLE 490
             + +  +  ++ +I G CK G LD+A++L  K+ +KG++P  +TYS +I GLC + +L 
Sbjct: 391 AKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLN 450

Query: 491 KANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSI 550
            A +    M + G  P+  T+ TL+ G  +     K + L  +M    + ++PD  T+S+
Sbjct: 451 DACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMI--RKGVLPDVVTYSV 508

Query: 551 VVDLLAKDEKYHE 563
           +++ L+K  +  E
Sbjct: 509 LINGLSKSARTKE 521



 Score =  215 bits (548), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 129/429 (30%), Positives = 227/429 (52%), Gaps = 11/429 (2%)

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
           +  A     +M+  GV P+V TY  L+   C  G L  A+      V GD   G     N
Sbjct: 133 LPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEAVG-----VVGDMR-GAGCAPN 186

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRG-INPAVVVCTTLIHGFCCAGNWEEVNGLF 251
             +Y+ ++ + C+ G +D A+ +   M+  G   P +V   ++++G C AG  E    +F
Sbjct: 187 AVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVF 246

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
            EM+  G  P+++++N ++   CK G ++E+  +   M QRGL PD  T+ SL+   C  
Sbjct: 247 DEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKA 306

Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
           G ++ A  +   M  +G +   V++  LI+G+CK   +++A+    ++   G++ +V+ Y
Sbjct: 307 GNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCY 366

Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFH-MLE 430
           N L++G  + G+   A++L  EM+   V+PD+ TY+ +I G CK   +  A +L   ML+
Sbjct: 367 NALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLK 426

Query: 431 MNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLE 490
                  I  ++ LI GLC+  RL++A ELF  + Q G+ P   TY+ +I G C++G +E
Sbjct: 427 KGVLPDAI-TYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVE 485

Query: 491 KANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSI 550
           KA      M + G  P+VVT++ L++G  ++ +T +   LL K+     + VPD+  +  
Sbjct: 486 KALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLY--HEDPVPDNIKYDA 543

Query: 551 VVDLLAKDE 559
           ++   +K E
Sbjct: 544 LMLCCSKAE 552



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 125/439 (28%), Positives = 225/439 (51%), Gaps = 32/439 (7%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
           P + +FN +   + K    +     + ++V  GL PD ++ N L++       G C    
Sbjct: 221 PNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLS-------GYCKVGC 273

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
           + E+  +F  M   G+ PDV+T+ +LI+  C+ GNL  A+ L  +M     E GL  + N
Sbjct: 274 LHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQM----RERGL--RMN 327

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
             +++ +ID  CK+G +D A     EM+  GI P+VV    LI+G+C  G  +    L  
Sbjct: 328 EVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIR 387

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
           EM     +P+++T++ +I   CK G ++ A  L + M+++G+ PD  TY+SL+ G C   
Sbjct: 388 EMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEK 447

Query: 313 RIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYN 372
           R++ A E+F +M   G +    +Y  LI+G+CK  NVE+A+SL+ ++I  GV   V+TY+
Sbjct: 448 RLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYS 507

Query: 373 TLLSGLFQAGQAGYAQKLFDEMKLYNVEP-----------------DLSTYNILIDGLCK 415
            L++GL ++ +   A +L    KLY+ +P                 +  +   L+ G C 
Sbjct: 508 VLINGLSKSARTKEAHRLL--FKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCM 565

Query: 416 NNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVT 475
              ++EA K++  +    ++    +++ LI G C+ G +  A     ++ + G  P   +
Sbjct: 566 KGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTS 625

Query: 476 YSIMIHGLCRKGKLEKAND 494
              ++ GL  +G + +A++
Sbjct: 626 TISLVRGLFEEGMVVEADN 644



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 126/425 (29%), Positives = 200/425 (47%), Gaps = 52/425 (12%)

Query: 44  FLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVS 103
            +H  CK+G  NL +A      M          +F  L     K    D  +    ++  
Sbjct: 299 LIHATCKAG--NLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRK 356

Query: 104 IGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFC 163
            G+ P  +  N LIN       G C   R+  A  L + M A  V+PDV+TY T+I+G+C
Sbjct: 357 CGIQPSVVCYNALIN-------GYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYC 409

Query: 164 RTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRG 223
           + GNL  A +L++KM+    + G++   +  +YS +I  LC+E  ++ A ELF  M   G
Sbjct: 410 KVGNLDSAFQLNQKML----KKGVLP--DAITYSSLIRGLCEEKRLNDACELFENMLQLG 463

Query: 224 INPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEAN 283
           + P     TTLI G C  GN E+   L  EM+  G  P+++T++V+I+ L K  +  EA+
Sbjct: 464 VQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAH 523

Query: 284 GLLELMIQRGLNPDRFTYNSLM---------------DGYCLVGRIDTAREIFLSMHSKG 328
            LL  +      PD   Y++LM                G+C+ G +  A +++ SM  + 
Sbjct: 524 RLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRN 583

Query: 329 CKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQ 388
            K     Y+ILI+G+C+  NV +A+S ++Q++ +G      +  +L+ GLF+ G    A 
Sbjct: 584 WKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEAD 643

Query: 389 KLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGL 448
                    N   DL T   L D         EA K   ++++N+ E  ++    LID L
Sbjct: 644 ---------NAIQDLLTCCPLADA--------EASKA--LIDLNRKEGNVD---ALIDVL 681

Query: 449 CKAGR 453
           C   R
Sbjct: 682 CGMAR 686



 Score =  101 bits (252), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 85/331 (25%), Positives = 139/331 (41%), Gaps = 53/331 (16%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
           N  ++  CK G ++L  AR     M   +  P + +++ +     K  + D+     +K+
Sbjct: 367 NALINGYCKLGRMDL--ARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKM 424

Query: 102 VSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLING 161
           +  G+LPD +T + LI       RGLC E R+ +A  LF+NM+  GV+PD  TY TLI+G
Sbjct: 425 LKKGVLPDAITYSSLI-------RGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDG 477

Query: 162 FCRTGNLSVALRLHKKMVSG-------DYE---NGL------------------------ 187
            C+ GN+  AL LH +M+          Y    NGL                        
Sbjct: 478 HCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPD 537

Query: 188 ----------ISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHG 237
                      SK    S   ++   C +GL+ +A +++  M  R       V + LIHG
Sbjct: 538 NIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHG 597

Query: 238 FCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPD 297
            C  GN  +      +ML  G  PN  +   ++  L + G + EA+  ++ ++      D
Sbjct: 598 HCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEADNAIQDLLTCCPLAD 657

Query: 298 RFTYNSLMDGYCLVGRIDTAREIFLSMHSKG 328
                +L+D     G +D   ++   M   G
Sbjct: 658 AEASKALIDLNRKEGNVDALIDVLCGMARDG 688


>gi|297723047|ref|NP_001173887.1| Os04g0351333 [Oryza sativa Japonica Group]
 gi|255675359|dbj|BAH92615.1| Os04g0351333 [Oryza sativa Japonica Group]
          Length = 740

 Score =  249 bits (637), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 156/537 (29%), Positives = 273/537 (50%), Gaps = 17/537 (3%)

Query: 29  RQIAAVSSPET-QLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAK 87
           + + A + P +   N  +H    SG+   NE+   F  M+     P + + N    A+ K
Sbjct: 143 QMVEAGTRPNSITYNSLIHGYSISGM--WNESVRVFKQMSSCGVIPTVDNCNSFIHALFK 200

Query: 88  NRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFG 147
           +   +     +  +V  G  PD ++ + +++ +         ++ + +   +F  M+  G
Sbjct: 201 HGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYAT-----ATDSCLADVHNIFNLMLTKG 255

Query: 148 VRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEG 207
           + P+   +  LIN + R G +  A+ + + M       G+I  T   +++ +I SLC+ G
Sbjct: 256 IAPNKHVFNILINAYARCGMMDKAMLIFEDM----QNKGMIPDT--VTFATVISSLCRIG 309

Query: 208 LVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLG-PRPNLLTF 266
            +D A   F  M   G+ P+  V   LI G C  G   +   L  EM++   P P +  F
Sbjct: 310 RLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYF 369

Query: 267 NVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHS 326
           + +I+ LCK G++ E   ++++M+Q G  P+  T+NSLM+GYCLVG ++ A  +  +M S
Sbjct: 370 SSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMAS 429

Query: 327 KGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGY 386
            G +     Y  L++GYCK   +++A++++R ++  GV+ T + Y+ +L GLFQA +   
Sbjct: 430 IGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTA 489

Query: 387 AQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLID 446
           A+K+F EM        + TY +++ GLC+NNC  EA  L   L     +F I  FN +I 
Sbjct: 490 AKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVIS 549

Query: 447 GLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAP 506
            + K GR   A ELF  +   GLVP + TYS+MI  L ++   E+A++  + +EK+G A 
Sbjct: 550 AMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHAS 609

Query: 507 NVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
           +    N ++   L   + +K    L  +   E NL  + +T S++  L +++ KY E
Sbjct: 610 DSRLLNHIVRMLLNKAEVAKASNYLSIIG--ENNLTLEASTISLLASLFSREGKYRE 664



 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 140/511 (27%), Positives = 255/511 (49%), Gaps = 18/511 (3%)

Query: 56  LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNI 115
           +++A   F  M      P I   N +   + K +  D   S  +K+V  G+ PD  T ++
Sbjct: 64  VDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSL 123

Query: 116 LINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLH 175
           +I+       GLC    + +A  + + M+  G RP+ ITY +LI+G+  +G  + ++R+ 
Sbjct: 124 IID-------GLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVF 176

Query: 176 KKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLI 235
           K+M S     G+I   +  + +  I +L K G  ++AK +F  M  +G  P ++  +T++
Sbjct: 177 KQMSSC----GVIPTVD--NCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTML 230

Query: 236 HGFCCAGN--WEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRG 293
           HG+  A +    +V+ +F  ML  G  PN   FN++I+   + G +++A  + E M  +G
Sbjct: 231 HGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKG 290

Query: 294 LNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAM 353
           + PD  T+ +++   C +GR+D A   F  M   G   +   Y  LI G C    + +A 
Sbjct: 291 MIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAK 350

Query: 354 SLYRQIISNGVRQTVITY-NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDG 412
            L  ++++  +    + Y +++++ L + G+    + + D M      P++ T+N L++G
Sbjct: 351 ELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEG 410

Query: 413 LCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPT 472
            C    ++EA  L   +     E    I+  L+DG CK GR+D+A  +F  +  KG+ PT
Sbjct: 411 YCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPT 470

Query: 473 VVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLH 532
            V YSI++HGL +  +   A      M ++G   ++ T+  ++ G  +NN T +   LL 
Sbjct: 471 SVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLE 530

Query: 533 KMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
           K+     N+  D  TF+IV+  + K  +  E
Sbjct: 531 KLF--AMNVKFDIITFNIVISAMFKVGRRQE 559



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 132/474 (27%), Positives = 234/474 (49%), Gaps = 22/474 (4%)

Query: 72  SPP-ISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVE 130
           SPP I ++N+L     +    D  ++   +L+  GL PD  + +++         G   +
Sbjct: 10  SPPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYSLIY--------GFVKD 61

Query: 131 NRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISK 190
             + +A  LF  M+  GV P ++   ++I   C+   +  A  + +KMV    ++G+   
Sbjct: 62  GEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMV----DSGI--A 115

Query: 191 TNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGL 250
            ++F+YS+IID LCK   +DKA+ +  +M   G  P  +   +LIHG+  +G W E   +
Sbjct: 116 PDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRV 175

Query: 251 FIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCL 310
           F +M   G  P +   N  I  L K G+ NEA  + + M+ +G  PD  +Y++++ GY  
Sbjct: 176 FKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYAT 235

Query: 311 VGR--IDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTV 368
                +     IF  M +KG       +NILIN Y +   +++AM ++  + + G+    
Sbjct: 236 ATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDT 295

Query: 369 ITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLF-H 427
           +T+ T++S L + G+   A   F+ M    V P  + Y  LI G C +  + +A +L   
Sbjct: 296 VTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISE 355

Query: 428 MLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKG 487
           M+  +    G++ F+ +I+ LCK GR+    ++   + Q G  P VVT++ ++ G C  G
Sbjct: 356 MMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVG 415

Query: 488 KLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVV----ELLHKMAEP 537
            +E+A   L  M   G  PN   + TL+ G+ +N +    +    ++LHK  +P
Sbjct: 416 NMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKP 469



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 133/480 (27%), Positives = 235/480 (48%), Gaps = 53/480 (11%)

Query: 150 PDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLV 209
           P + TY  LI+ + R     + L +  +++    +NGL    + FSYS+I     K+G V
Sbjct: 12  PTIHTYNILIDCYRRVHRPDLGLAIVGRLL----KNGL--GPDDFSYSLIY-GFVKDGEV 64

Query: 210 DKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVM 269
           DKA  LFLEM  +G+ P +++C ++I   C     ++   +  +M+D G  P+L T++++
Sbjct: 65  DKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLI 124

Query: 270 IDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV------------------ 311
           ID LCK   +++A  +LE M++ G  P+  TYNSL+ GY +                   
Sbjct: 125 IDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGV 184

Query: 312 -----------------GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILN--VEEA 352
                            GR + A+ IF SM  KG K  ++SY+ +++GY    +  + + 
Sbjct: 185 IPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADV 244

Query: 353 MSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDG 412
            +++  +++ G+      +N L++   + G    A  +F++M+   + PD  T+  +I  
Sbjct: 245 HNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISS 304

Query: 413 LCKNNCVQEAVKLF-HMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVP 471
           LC+   + +A+  F HM+++        ++ CLI G C  G L  A EL  ++  K + P
Sbjct: 305 LCRIGRLDDALHKFNHMVDIG-VPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPP 363

Query: 472 TVVTY-SIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVEL 530
             V Y S +I+ LC++G++ +  D +  M + G  PNVVTFN+LM G+       +   L
Sbjct: 364 PGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFAL 423

Query: 531 LHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKSSYRACLYVTIFQPSSLGSMI 590
           L  MA     + P+   +  +VD   K+ +  +   V    +R  L+  +   S L S+I
Sbjct: 424 LDAMASI--GIEPNCYIYGTLVDGYCKNGRIDDALTV----FRDMLHKGVKPTSVLYSII 477


>gi|297803282|ref|XP_002869525.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297315361|gb|EFH45784.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 707

 Score =  249 bits (636), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 175/588 (29%), Positives = 276/588 (46%), Gaps = 47/588 (7%)

Query: 31  IAAVSSPETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRH 90
           +   S  ET+L       C+     L  A   F        S   +  NL+   + ++R+
Sbjct: 33  VNTFSETETKLRSL----CEDSNPQLKNAVSVFQQAVDSGGSLSFAGNNLM-ATLVRSRN 87

Query: 91  YDAVISFYRKLVSIGLLPDFLTLNILINCFGNKE-------------------------- 124
           ++   SFYRK++      +F++L+ L+ CF                              
Sbjct: 88  HEVAFSFYRKMLETDTFINFVSLSGLLECFVQMRKTGFAHGVLALMLKRGFAFNVYNYNI 147

Query: 125 --RGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGD 182
             +GLC      +A  L + M    + PDV++Y T+I GFC    L  AL+L  +M    
Sbjct: 148 LLKGLCRNLEFGKAVSLLREMRQNSLMPDVVSYNTVIRGFCEGKELEKALQLANEM---- 203

Query: 183 YENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAG 242
              G     ++ ++ I+ID+ CK G +D+A  L  EMK +G+   ++V T+LI GFC  G
Sbjct: 204 --QGSGCSWSLVTWGILIDAFCKAGKMDEAMGLLKEMKHKGLEADLIVYTSLIRGFCDCG 261

Query: 243 NWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYN 302
             +    LF E+L+ G  P  +T+N +I   CK G++ EA+ + E M++RG+ P+ +TY 
Sbjct: 262 ELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGRLKEASEIFEFMMERGVRPNVYTYT 321

Query: 303 SLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISN 362
            L+DG C VG+   A ++   M  K  +  VV+YNI+IN  CK   V +A+ +   +   
Sbjct: 322 GLIDGLCGVGKTKEALQLLNLMLQKDEEPNVVTYNIIINKLCKDSLVADALEIVELMKKR 381

Query: 363 GVRQTVITYNTLLSGLFQAGQAGYAQKLFDEM--KLYNVEPDLSTYNILIDGLCKNNCVQ 420
             R   ITYN+LL GL   G    A KL   M       +PD+ ++N LI GLCK N + 
Sbjct: 382 RTRPDNITYNSLLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISFNALIHGLCKGNRLH 441

Query: 421 EAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMI 480
           +A+ ++ +L        I   N L++   K+G ++ A EL+ ++    +VP   TY+ MI
Sbjct: 442 QALDIYDLLVEKLGAGDIVTTNILLNSTLKSGDVNKAMELWKQISNSKIVPNSDTYTTMI 501

Query: 481 HGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERN 540
            G C+ G L  A   L  M  +   P+V  +N L+    +     +   L  +M   +  
Sbjct: 502 DGFCKTGMLNVAKGLLCKMRLSELPPSVFDYNCLLSSLCKKGTLDQAWRLFEEMQRDDS- 560

Query: 541 LVPDDTTFSIVVD--LLAKDEKYHECSAVSKSSYRACLYVTIFQPSSL 586
             PD  +F+I++D  L A D K  E   V  S   A L   +F  S L
Sbjct: 561 -FPDVISFNIMIDGSLKAGDIKSAESLLVGMS--HAGLSPDLFTYSKL 605



 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 144/500 (28%), Positives = 240/500 (48%), Gaps = 50/500 (10%)

Query: 75  ISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIK 134
           + ++N+L   + +N  +   +S  R++    L+PD ++ N +I       RG C    ++
Sbjct: 142 VYNYNILLKGLCRNLEFGKAVSLLREMRQNSLMPDVVSYNTVI-------RGFCEGKELE 194

Query: 135 EATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIF 194
           +A  L   M   G    ++T+G LI+ FC+ G +  A+ L K+M     E  LI      
Sbjct: 195 KALQLANEMQGSGCSWSLVTWGILIDAFCKAGKMDEAMGLLKEMKHKGLEADLIV----- 249

Query: 195 SYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEM 254
            Y+ +I   C  G +D+ K LF E+  RG +P  +   TLI GFC  G  +E + +F  M
Sbjct: 250 -YTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGRLKEASEIFEFM 308

Query: 255 LDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQ----------------------- 291
           ++ G RPN+ T+  +ID LC  GK  EA  LL LM+Q                       
Sbjct: 309 MERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMLQKDEEPNVVTYNIIINKLCKDSLV 368

Query: 292 ------------RGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSM--HSKGCKHTVVSYN 337
                       R   PD  TYNSL+ G C  G +D A ++   M   S      V+S+N
Sbjct: 369 ADALEIVELMKKRRTRPDNITYNSLLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISFN 428

Query: 338 ILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLY 397
            LI+G CK   + +A+ +Y  ++       ++T N LL+   ++G    A +L+ ++   
Sbjct: 429 ALIHGLCKGNRLHQALDIYDLLVEKLGAGDIVTTNILLNSTLKSGDVNKAMELWKQISNS 488

Query: 398 NVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNA 457
            + P+  TY  +IDG CK   +  A  L   + +++    +  +NCL+  LCK G LD A
Sbjct: 489 KIVPNSDTYTTMIDGFCKTGMLNVAKGLLCKMRLSELPPSVFDYNCLLSSLCKKGTLDQA 548

Query: 458 WELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHG 517
           W LF ++ +    P V++++IMI G  + G ++ A   L+ M   G +P++ T++ L++ 
Sbjct: 549 WRLFEEMQRDDSFPDVISFNIMIDGSLKAGDIKSAESLLVGMSHAGLSPDLFTYSKLINR 608

Query: 518 FLQNNKTSKVVELLHKMAEP 537
           FL+     + +    KM + 
Sbjct: 609 FLKLGYLDEAISFFDKMIDS 628



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 117/453 (25%), Positives = 207/453 (45%), Gaps = 47/453 (10%)

Query: 116 LINCFGNKE---RGLCVEN--RIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSV 170
           L+N F   E   R LC ++  ++K A  +F+  +  G          L+    R+ N  V
Sbjct: 32  LVNTFSETETKLRSLCEDSNPQLKNAVSVFQQAVDSGGSLS-FAGNNLMATLVRSRNHEV 90

Query: 171 ALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVV 230
           A   ++KM+  D     +S + +                    E F++M+  G       
Sbjct: 91  AFSFYRKMLETDTFINFVSLSGLL-------------------ECFVQMRKTGF------ 125

Query: 231 CTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMI 290
                            +G+   ML  G   N+  +N+++  LC+  +  +A  LL  M 
Sbjct: 126 ----------------AHGVLALMLKRGFAFNVYNYNILLKGLCRNLEFGKAVSLLREMR 169

Query: 291 QRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVE 350
           Q  L PD  +YN+++ G+C    ++ A ++   M   GC  ++V++ ILI+ +CK   ++
Sbjct: 170 QNSLMPDVVSYNTVIRGFCEGKELEKALQLANEMQGSGCSWSLVTWGILIDAFCKAGKMD 229

Query: 351 EAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILI 410
           EAM L +++   G+   +I Y +L+ G    G+    + LFDE+      P   TYN LI
Sbjct: 230 EAMGLLKEMKHKGLEADLIVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLI 289

Query: 411 DGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLV 470
            G CK   ++EA ++F  +        +  +  LIDGLC  G+   A +L + + QK   
Sbjct: 290 RGFCKLGRLKEASEIFEFMMERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMLQKDEE 349

Query: 471 PTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVEL 530
           P VVTY+I+I+ LC+   +  A + +  M+K    P+ +T+N+L+ G        +  +L
Sbjct: 350 PNVVTYNIIINKLCKDSLVADALEIVELMKKRRTRPDNITYNSLLGGLCAKGDLDEASKL 409

Query: 531 LHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
           L+ M +      PD  +F+ ++  L K  + H+
Sbjct: 410 LYLMLKDSSYTDPDVISFNALIHGLCKGNRLHQ 442



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 88/348 (25%), Positives = 159/348 (45%), Gaps = 19/348 (5%)

Query: 52  GIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFL 111
           G+    EA      M      P + ++N++   + K+      +     +      PD +
Sbjct: 329 GVGKTKEALQLLNLMLQKDEEPNVVTYNIIINKLCKDSLVADALEIVELMKKRRTRPDNI 388

Query: 112 TLNILINCFGNKERGLCVENRIKEATWLFKNMIAFG--VRPDVITYGTLINGFCRTGNLS 169
           T N L+        GLC +  + EA+ L   M+       PDVI++  LI+G C+   L 
Sbjct: 389 TYNSLLG-------GLCAKGDLDEASKLLYLMLKDSSYTDPDVISFNALIHGLCKGNRLH 441

Query: 170 VALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVV 229
            AL ++  +V        +   +I + +I+++S  K G V+KA EL+ ++    I P   
Sbjct: 442 QALDIYDLLVEK------LGAGDIVTTNILLNSTLKSGDVNKAMELWKQISNSKIVPNSD 495

Query: 230 VCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELM 289
             TT+I GFC  G      GL  +M      P++  +N ++  LCK G +++A  L E M
Sbjct: 496 TYTTMIDGFCKTGMLNVAKGLLCKMRLSELPPSVFDYNCLLSSLCKKGTLDQAWRLFEEM 555

Query: 290 IQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNV 349
            +    PD  ++N ++DG    G I +A  + + M   G    + +Y+ LIN + K+  +
Sbjct: 556 QRDDSFPDVISFNIMIDGSLKAGDIKSAESLLVGMSHAGLSPDLFTYSKLINRFLKLGYL 615

Query: 350 EEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAG----YAQKLFDE 393
           +EA+S + ++I +G        +++L      G+      + +KL D+
Sbjct: 616 DEAISFFDKMIDSGFEPDAHICDSVLKYCISQGETDKLTEFVKKLVDK 663


>gi|297605196|ref|NP_001056837.2| Os06g0152500 [Oryza sativa Japonica Group]
 gi|255676726|dbj|BAF18751.2| Os06g0152500 [Oryza sativa Japonica Group]
          Length = 717

 Score =  249 bits (636), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 148/452 (32%), Positives = 247/452 (54%), Gaps = 29/452 (6%)

Query: 72  SPPISSFNLLFGAVAKNRHYDAVISFYRKLVSI----GLLPDFLTLNILINCFGNKERGL 127
           +P + ++N +  A++     DA +   R+ +S     G+ P+  T NIL+       R L
Sbjct: 115 APSVPAYNAVLLALS-----DASLPSARRFLSSMLRHGVAPNVYTYNILV-------RAL 162

Query: 128 CVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGL 187
           C   R++EA  +  +M   G  P+ +TY TL+  FCR G L  A    +++VS   E G 
Sbjct: 163 CARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGA----ERVVSLMREEG- 217

Query: 188 ISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEV 247
            +K N+ +++ +++ LCK G ++ A+++F EM   G+ P VV   TL+ G+C  G   E 
Sbjct: 218 NAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHES 277

Query: 248 NGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDG 307
             +F EM   G  P+++TF  +I   CK G + +A  L+  M +RGL  +  T+ +L+DG
Sbjct: 278 LAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDG 337

Query: 308 YCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQT 367
           +C  G +D A      M   G + +VV YN LINGYCK+  ++ A  L R++ +  V+  
Sbjct: 338 FCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPD 397

Query: 368 VITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFH 427
           V+TY+T++SG  + G    A +L  +M    V PD  TY+ LI GLC+   + +A +LF 
Sbjct: 398 VVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFE 457

Query: 428 MLEMNKFEFGIE----IFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGL 483
               N  + G++     +  LIDG CK G ++ A  L  ++ +KG++P VVTYS++I+GL
Sbjct: 458 ----NMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGL 513

Query: 484 CRKGKLEKANDFLLYMEKNGCAPNVVTFNTLM 515
            +  + ++A+  L  +      P+ + ++ LM
Sbjct: 514 SKSARTKEAHRLLFKLYHEDPVPDNIKYDALM 545



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 118/373 (31%), Positives = 209/373 (56%), Gaps = 3/373 (0%)

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
           N+++Y+I++ +LC  G +++A  +  +M+G G  P  V   TL+  FC AG  +    + 
Sbjct: 151 NVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVV 210

Query: 252 IEMLDLG-PRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCL 310
             M + G  +PNL+TFN M++ LCK G++  A  + + M++ GL PD  +YN+L+ GYC 
Sbjct: 211 SLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCK 270

Query: 311 VGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVIT 370
           VG +  +  +F  M  +G    VV++  LI+  CK  N+E+A++L  Q+   G+R   +T
Sbjct: 271 VGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVT 330

Query: 371 YNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLE 430
           +  L+ G  + G    A    +EM+   ++P +  YN LI+G CK   +  A +L   +E
Sbjct: 331 FTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREME 390

Query: 431 MNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLE 490
             + +  +  ++ +I G CK G LD+A++L  K+ +KG++P  +TYS +I GLC + +L 
Sbjct: 391 AKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLN 450

Query: 491 KANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSI 550
            A +    M + G  P+  T+ TL+ G  +     K + L  +M    + ++PD  T+S+
Sbjct: 451 DACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMI--RKGVLPDVVTYSV 508

Query: 551 VVDLLAKDEKYHE 563
           +++ L+K  +  E
Sbjct: 509 LINGLSKSARTKE 521



 Score =  215 bits (547), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 129/429 (30%), Positives = 227/429 (52%), Gaps = 11/429 (2%)

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
           +  A     +M+  GV P+V TY  L+   C  G L  A+      V GD   G     N
Sbjct: 133 LPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEAVG-----VVGDMR-GAGCAPN 186

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRG-INPAVVVCTTLIHGFCCAGNWEEVNGLF 251
             +Y+ ++ + C+ G +D A+ +   M+  G   P +V   ++++G C AG  E    +F
Sbjct: 187 AVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVF 246

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
            EM+  G  P+++++N ++   CK G ++E+  +   M QRGL PD  T+ SL+   C  
Sbjct: 247 DEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKA 306

Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
           G ++ A  +   M  +G +   V++  LI+G+CK   +++A+    ++   G++ +V+ Y
Sbjct: 307 GNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCY 366

Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFH-MLE 430
           N L++G  + G+   A++L  EM+   V+PD+ TY+ +I G CK   +  A +L   ML+
Sbjct: 367 NALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLK 426

Query: 431 MNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLE 490
                  I  ++ LI GLC+  RL++A ELF  + Q G+ P   TY+ +I G C++G +E
Sbjct: 427 KGVLPDAI-TYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVE 485

Query: 491 KANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSI 550
           KA      M + G  P+VVT++ L++G  ++ +T +   LL K+     + VPD+  +  
Sbjct: 486 KALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLY--HEDPVPDNIKYDA 543

Query: 551 VVDLLAKDE 559
           ++   +K E
Sbjct: 544 LMLCCSKAE 552



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 125/439 (28%), Positives = 225/439 (51%), Gaps = 32/439 (7%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
           P + +FN +   + K    +     + ++V  GL PD ++ N L++       G C    
Sbjct: 221 PNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLS-------GYCKVGC 273

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
           + E+  +F  M   G+ PDV+T+ +LI+  C+ GNL  A+ L  +M     E GL  + N
Sbjct: 274 LHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQM----RERGL--RMN 327

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
             +++ +ID  CK+G +D A     EM+  GI P+VV    LI+G+C  G  +    L  
Sbjct: 328 EVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIR 387

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
           EM     +P+++T++ +I   CK G ++ A  L + M+++G+ PD  TY+SL+ G C   
Sbjct: 388 EMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEK 447

Query: 313 RIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYN 372
           R++ A E+F +M   G +    +Y  LI+G+CK  NVE+A+SL+ ++I  GV   V+TY+
Sbjct: 448 RLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYS 507

Query: 373 TLLSGLFQAGQAGYAQKLFDEMKLYNVEP-----------------DLSTYNILIDGLCK 415
            L++GL ++ +   A +L    KLY+ +P                 +  +   L+ G C 
Sbjct: 508 VLINGLSKSARTKEAHRLL--FKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCM 565

Query: 416 NNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVT 475
              ++EA K++  +    ++    +++ LI G C+ G +  A     ++ + G  P   +
Sbjct: 566 KGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTS 625

Query: 476 YSIMIHGLCRKGKLEKAND 494
              ++ GL  +G + +A++
Sbjct: 626 TISLVRGLFEEGMVVEADN 644



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 113/383 (29%), Positives = 182/383 (47%), Gaps = 30/383 (7%)

Query: 44  FLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVS 103
            +H  CK+G  NL +A      M          +F  L     K    D  +    ++  
Sbjct: 299 LIHATCKAG--NLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRK 356

Query: 104 IGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFC 163
            G+ P  +  N LIN       G C   R+  A  L + M A  V+PDV+TY T+I+G+C
Sbjct: 357 CGIQPSVVCYNALIN-------GYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYC 409

Query: 164 RTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRG 223
           + GNL  A +L++KM+    + G++   +  +YS +I  LC+E  ++ A ELF  M   G
Sbjct: 410 KVGNLDSAFQLNQKML----KKGVLP--DAITYSSLIRGLCEEKRLNDACELFENMLQLG 463

Query: 224 INPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEAN 283
           + P     TTLI G C  GN E+   L  EM+  G  P+++T++V+I+ L K  +  EA+
Sbjct: 464 VQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAH 523

Query: 284 GLLELMIQRGLNPDRFTYNSLM---------------DGYCLVGRIDTAREIFLSMHSKG 328
            LL  +      PD   Y++LM                G+C+ G +  A +++ SM  + 
Sbjct: 524 RLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRN 583

Query: 329 CKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQ 388
            K     Y+ILI+G+C+  NV +A+S ++Q++ +G      +  +L+ GLF+ G    A 
Sbjct: 584 WKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEAD 643

Query: 389 KLFDEMKLYNVEPDLSTYNILID 411
               ++       D      LID
Sbjct: 644 NAIQDLLTCCPLADAEASKALID 666


>gi|32489931|emb|CAE05523.1| OSJNBa0038P21.16 [Oryza sativa Japonica Group]
 gi|38347491|emb|CAE05839.2| OSJNBa0091C07.1 [Oryza sativa Japonica Group]
          Length = 844

 Score =  249 bits (636), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 154/523 (29%), Positives = 268/523 (51%), Gaps = 16/523 (3%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
           N  +H    SG+   NE+   F  M+     P + + N    A+ K+   +     +  +
Sbjct: 319 NSLIHGYSISGM--WNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSM 376

Query: 102 VSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLING 161
           V  G  PD ++ + +++ +         ++ + +   +F  M+  G+ P+   +  LIN 
Sbjct: 377 VLKGPKPDIISYSTMLHGYAT-----ATDSCLADVHNIFNLMLTKGIAPNKHVFNILINA 431

Query: 162 FCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKG 221
           + R G +  A+ + + M +     G+I  T   +++ +I SLC+ G +D A   F  M  
Sbjct: 432 YARCGMMDKAMLIFEDMQN----KGMIPDT--VTFATVISSLCRIGRLDDALHKFNHMVD 485

Query: 222 RGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLG-PRPNLLTFNVMIDCLCKGGKIN 280
            G+ P+  V   LI G C  G   +   L  EM++   P P +  F+ +I+ LCK G++ 
Sbjct: 486 IGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVA 545

Query: 281 EANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILI 340
           E   ++++M+Q G  P+  T+NSLM+GYCLVG ++ A  +  +M S G +     Y  L+
Sbjct: 546 EGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLV 605

Query: 341 NGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVE 400
           +GYCK   +++A++++R ++  GV+ T + Y+ +L GLFQA +   A+K+F EM      
Sbjct: 606 DGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTT 665

Query: 401 PDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWEL 460
             + TY +++ GLC+NNC  EA  L   L     +F I  FN +I  + K GR   A EL
Sbjct: 666 VSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKEL 725

Query: 461 FHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQ 520
           F  +   GLVP + TYS+MI  L ++   E+A++  + +EK+G A +    N ++   L 
Sbjct: 726 FDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIVRMLLN 785

Query: 521 NNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
             + +K    L  +   E NL  + +T S++  L +++ KY E
Sbjct: 786 KAEVAKASNYLSIIG--ENNLTLEASTISLLASLFSREGKYRE 826



 Score =  205 bits (521), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 140/511 (27%), Positives = 255/511 (49%), Gaps = 18/511 (3%)

Query: 56  LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNI 115
           +++A   F  M      P I   N +   + K +  D   S  +K+V  G+ PD  T ++
Sbjct: 226 VDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSL 285

Query: 116 LINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLH 175
           +I+       GLC    + +A  + + M+  G RP+ ITY +LI+G+  +G  + ++R+ 
Sbjct: 286 IID-------GLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVF 338

Query: 176 KKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLI 235
           K+M S     G+I   +  + +  I +L K G  ++AK +F  M  +G  P ++  +T++
Sbjct: 339 KQMSSC----GVIPTVD--NCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTML 392

Query: 236 HGFCCAGN--WEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRG 293
           HG+  A +    +V+ +F  ML  G  PN   FN++I+   + G +++A  + E M  +G
Sbjct: 393 HGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKG 452

Query: 294 LNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAM 353
           + PD  T+ +++   C +GR+D A   F  M   G   +   Y  LI G C    + +A 
Sbjct: 453 MIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAK 512

Query: 354 SLYRQIISNGVRQTVITY-NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDG 412
            L  ++++  +    + Y +++++ L + G+    + + D M      P++ T+N L++G
Sbjct: 513 ELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEG 572

Query: 413 LCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPT 472
            C    ++EA  L   +     E    I+  L+DG CK GR+D+A  +F  +  KG+ PT
Sbjct: 573 YCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPT 632

Query: 473 VVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLH 532
            V YSI++HGL +  +   A      M ++G   ++ T+  ++ G  +NN T +   LL 
Sbjct: 633 SVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLE 692

Query: 533 KMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
           K+     N+  D  TF+IV+  + K  +  E
Sbjct: 693 KLF--AMNVKFDIITFNIVISAMFKVGRRQE 721



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 132/474 (27%), Positives = 234/474 (49%), Gaps = 22/474 (4%)

Query: 72  SPP-ISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVE 130
           SPP I ++N+L     +    D  ++   +L+  GL PD  + +++         G   +
Sbjct: 172 SPPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYSLIY--------GFVKD 223

Query: 131 NRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISK 190
             + +A  LF  M+  GV P ++   ++I   C+   +  A  + +KMV    ++G+   
Sbjct: 224 GEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMV----DSGI--A 277

Query: 191 TNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGL 250
            ++F+YS+IID LCK   +DKA+ +  +M   G  P  +   +LIHG+  +G W E   +
Sbjct: 278 PDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRV 337

Query: 251 FIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCL 310
           F +M   G  P +   N  I  L K G+ NEA  + + M+ +G  PD  +Y++++ GY  
Sbjct: 338 FKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYAT 397

Query: 311 VGR--IDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTV 368
                +     IF  M +KG       +NILIN Y +   +++AM ++  + + G+    
Sbjct: 398 ATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDT 457

Query: 369 ITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLF-H 427
           +T+ T++S L + G+   A   F+ M    V P  + Y  LI G C +  + +A +L   
Sbjct: 458 VTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISE 517

Query: 428 MLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKG 487
           M+  +    G++ F+ +I+ LCK GR+    ++   + Q G  P VVT++ ++ G C  G
Sbjct: 518 MMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVG 577

Query: 488 KLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVV----ELLHKMAEP 537
            +E+A   L  M   G  PN   + TL+ G+ +N +    +    ++LHK  +P
Sbjct: 578 NMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKP 631



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 138/498 (27%), Positives = 241/498 (48%), Gaps = 57/498 (11%)

Query: 136 ATWLFKNMIAFGVR----PDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKT 191
           A  LFK M  +       P + TY  LI+ + R     + L +  +++    +NGL    
Sbjct: 156 AIELFKRMDRWACPRHSPPTIHTYNILIDCYRRVHRPDLGLAIVGRLL----KNGL--GP 209

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
           + FSYS+I     K+G VDKA  LFLEM  +G+ P +++C ++I   C     ++   + 
Sbjct: 210 DDFSYSLIY-GFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIV 268

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
            +M+D G  P+L T++++ID LCK   +++A  +LE M++ G  P+  TYNSL+ GY + 
Sbjct: 269 QKMVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSIS 328

Query: 312 -----------------------------------GRIDTAREIFLSMHSKGCKHTVVSY 336
                                              GR + A+ IF SM  KG K  ++SY
Sbjct: 329 GMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISY 388

Query: 337 NILINGYCKILN--VEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEM 394
           + +++GY    +  + +  +++  +++ G+      +N L++   + G    A  +F++M
Sbjct: 389 STMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDM 448

Query: 395 KLYNVEPDLSTYNILIDGLCKNNCVQEAVKLF-HMLEMNKFEFGIEIFNCLIDGLCKAGR 453
           +   + PD  T+  +I  LC+   + +A+  F HM+++        ++ CLI G C  G 
Sbjct: 449 QNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIG-VPPSEAVYGCLIQGCCNHGE 507

Query: 454 LDNAWELFHKLPQKGLVPTVVTY-SIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFN 512
           L  A EL  ++  K + P  V Y S +I+ LC++G++ +  D +  M + G  PNVVTFN
Sbjct: 508 LVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFN 567

Query: 513 TLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKSSY 572
           +LM G+       +   LL  MA     + P+   +  +VD   K+ +  +   V    +
Sbjct: 568 SLMEGYCLVGNMEEAFALLDAMASI--GIEPNCYIYGTLVDGYCKNGRIDDALTV----F 621

Query: 573 RACLYVTIFQPSSLGSMI 590
           R  L+  +   S L S+I
Sbjct: 622 RDMLHKGVKPTSVLYSII 639


>gi|358346916|ref|XP_003637510.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503445|gb|AES84648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 718

 Score =  249 bits (635), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 154/514 (29%), Positives = 259/514 (50%), Gaps = 50/514 (9%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
           P  + +N+   A+ ++     V   + K+V+ G++ D  T N+LI       + LC  ++
Sbjct: 121 PDTNFYNIALNALVEDNKLKLVEMLHSKMVNEGIVLDVSTFNVLI-------KALCKAHQ 173

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
           ++ A  + + M   G++PD IT+ TL+ GF   G+L+ AL++ K+M+   Y   L   TN
Sbjct: 174 LRPAILMLEEMANHGLKPDEITFTTLMQGFIEEGDLNGALKMKKQMLG--YGCLL---TN 228

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEV----- 247
           + S  ++++  CKEG V++A    LE+   G +P  V   +L++GFC  GN  +      
Sbjct: 229 V-SVKVLVNGFCKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVNDALDIVD 287

Query: 248 --------------NGLFIEMLDLGP----------------RPNLLTFNVMIDCLCKGG 277
                         N L   M  LG                  PN +T+N +I  LCK  
Sbjct: 288 FMIEKGFDPDVYTYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLISALCKEN 347

Query: 278 KINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYN 337
           +I  A  L  +++ +GL PD  T+N+L+ G CL    D A E+F  M +KGCK    +Y+
Sbjct: 348 EIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYS 407

Query: 338 ILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLY 397
           ILI+  C    ++EA+ L +++ S+G  +  + YNTL+ GL ++ +   A+++FD+M+L 
Sbjct: 408 ILIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELL 467

Query: 398 NVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNA 457
            V     TYN LIDGLCKN  V+EA +L   + M   +     +N L+   C+ G ++ A
Sbjct: 468 GVSRSSVTYNTLIDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLLTYFCRVGDIEKA 527

Query: 458 WELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHG 517
            ++   +   G  P + TY  +I GLCR G+++ A+  L  ++  G       +N ++  
Sbjct: 528 GDIVQTMASNGCEPDIFTYGTLIGGLCRAGRVDVASKLLRSVQMKGIVLTPHAYNPVIQA 587

Query: 518 FLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIV 551
                +T + + L  +M   E++  PD  T  IV
Sbjct: 588 LFMRKRTKEGMRLFREMM--EKSDPPDALTHKIV 619



 Score =  239 bits (610), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 154/530 (29%), Positives = 268/530 (50%), Gaps = 37/530 (6%)

Query: 67  THMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGN---- 122
           T   P PP  +   L   + ++  +D++ +  ++L S G +P+  T   LI  F N    
Sbjct: 50  TTHHPLPPNET---LLLQLTQSSSFDSITTLLKQLKSSGSIPNATTFATLIQSFTNFHEI 106

Query: 123 --------KERG--------------LCVENRIKEATWLFKNMIAFGVRPDVITYGTLIN 160
                    E G              L  +N++K    L   M+  G+  DV T+  LI 
Sbjct: 107 ENLLKILENELGFKPDTNFYNIALNALVEDNKLKLVEMLHSKMVNEGIVLDVSTFNVLIK 166

Query: 161 GFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMK 220
             C+   L  A+ + ++M +    +GL  K +  +++ ++    +EG ++ A ++  +M 
Sbjct: 167 ALCKAHQLRPAILMLEEMAN----HGL--KPDEITFTTLMQGFIEEGDLNGALKMKKQML 220

Query: 221 GRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKIN 280
           G G     V    L++GFC  G  EE     +E+ + G  P+ +TFN +++  C+ G +N
Sbjct: 221 GYGCLLTNVSVKVLVNGFCKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVN 280

Query: 281 EANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILI 340
           +A  +++ MI++G +PD +TYNSL+ G C +G  + A EI   M  + C    V+YN LI
Sbjct: 281 DALDIVDFMIEKGFDPDVYTYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLI 340

Query: 341 NGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVE 400
           +  CK   +E A  L R ++S G+   V T+NTL+ GL  +     A ++F+EMK    +
Sbjct: 341 SALCKENEIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCK 400

Query: 401 PDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWEL 460
           PD  TY+ILID LC    ++EA+ L   +E +       ++N LIDGLCK+ R+++A E+
Sbjct: 401 PDEFTYSILIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEI 460

Query: 461 FHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQ 520
           F ++   G+  + VTY+ +I GLC+  ++E+A+  +  M   G  P+  T+N+L+  F +
Sbjct: 461 FDQMELLGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLLTYFCR 520

Query: 521 NNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKS 570
                K  +++  MA       PD  T+  ++  L +  +    S + +S
Sbjct: 521 VGDIEKAGDIVQTMA--SNGCEPDIFTYGTLIGGLCRAGRVDVASKLLRS 568



 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 81/296 (27%), Positives = 135/296 (45%), Gaps = 19/296 (6%)

Query: 78  FNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEAT 137
           +N L   + K+R  +     + ++  +G+    +T N LI+       GLC   R++EA+
Sbjct: 441 YNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSVTYNTLID-------GLCKNKRVEEAS 493

Query: 138 WLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYS 197
            L   MI  G++PD  TY +L+  FCR G++  A  + + M S   E       +IF+Y 
Sbjct: 494 QLMDQMIMEGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQTMASNGCE------PDIFTYG 547

Query: 198 IIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDL 257
            +I  LC+ G VD A +L   ++ +GI         +I         +E   LF EM++ 
Sbjct: 548 TLIGGLCRAGRVDVASKLLRSVQMKGIVLTPHAYNPVIQALFMRKRTKEGMRLFREMMEK 607

Query: 258 GPRPNLLTFNVMIDCLCKGG-KINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDT 316
              P+ LT  ++   LC GG  I EA      M+++G+ P+  ++  L +G C +   DT
Sbjct: 608 SDPPDALTHKIVFRGLCNGGGPIQEAIDFTVEMLEKGILPEFPSFGFLAEGLCSLSMEDT 667

Query: 317 AREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYN 372
             E+   +  K           +I G+ KI    +A++    I+    RQ    YN
Sbjct: 668 LIELINMVMEKA--QMSERETSMIRGFLKIRKFNDALANLGGILD---RQNPKRYN 718


>gi|356518209|ref|XP_003527773.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
           chloroplastic-like [Glycine max]
          Length = 1113

 Score =  249 bits (635), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 161/525 (30%), Positives = 273/525 (52%), Gaps = 18/525 (3%)

Query: 36  SPETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVI 95
           +P T L  F   + K GI    +A +  G M          S+N L   + +       +
Sbjct: 156 NPNTYLTIFKALSIKGGI---RQAPFALGKMRQAGFVLNAYSYNGLIYFLLQPGFCKEAL 212

Query: 96  SFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITY 155
             Y++++S GL P   T + L+   G +     + + ++E       M   G+RP++ TY
Sbjct: 213 KVYKRMISEGLKPSMKTYSALMVALGRRRDTGTIMDLLEE-------METLGLRPNIYTY 265

Query: 156 GTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKEL 215
              I    R G +  A  + K M   D   G     ++ +Y+++ID+LC  G +DKAKEL
Sbjct: 266 TICIRVLGRAGRIDDAYGILKTM--EDEGCG----PDVVTYTVLIDALCAAGKLDKAKEL 319

Query: 216 FLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCK 275
           + +M+     P +V   TL+  F   G+ E V   + EM   G  P+++T+ ++++ LCK
Sbjct: 320 YTKMRASSHKPDLVTYITLMSKFGNYGDLETVKRFWSEMEADGYAPDVVTYTILVEALCK 379

Query: 276 GGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVS 335
            GK+++A  +L++M  RG+ P+  TYN+L+ G   + R+D A E+F +M S G   T  S
Sbjct: 380 SGKVDQAFDMLDVMRVRGIVPNLHTYNTLISGLLNLRRLDEALELFNNMESLGVAPTAYS 439

Query: 336 YNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMK 395
           Y + I+ Y K+ + E+A+  + ++   G+  ++   N  L  L + G+   A+ +F+++ 
Sbjct: 440 YVLFIDYYGKLGDPEKALDTFEKMKKRGIMPSIAACNASLYSLAEMGRIREAKDIFNDIH 499

Query: 396 LYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLD 455
              + PD  TYN+++    K   + +A KL   +     E  I + N LID L KAGR+D
Sbjct: 500 NCGLSPDSVTYNMMMKCYSKAGQIDKATKLLTEMLSEGCEPDIIVVNSLIDTLYKAGRVD 559

Query: 456 NAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLM 515
            AW++F +L    L PTVVTY+I+I GL ++GKL KA D    M+++GC PN VTFN L+
Sbjct: 560 EAWQMFGRLKDLKLAPTVVTYNILITGLGKEGKLLKALDLFGSMKESGCPPNTVTFNALL 619

Query: 516 HGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEK 560
               +N+     +++  +M     N  PD  T++ ++  L K+ +
Sbjct: 620 DCLCKNDAVDLALKMFCRMT--IMNCSPDVLTYNTIIYGLIKEGR 662



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 143/518 (27%), Positives = 245/518 (47%), Gaps = 41/518 (7%)

Query: 58  EARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILI 117
           EA   +  M      P + +++ L  A+ + R    ++    ++ ++GL P+  T  I I
Sbjct: 210 EALKVYKRMISEGLKPSMKTYSALMVALGRRRDTGTIMDLLEEMETLGLRPNIYTYTICI 269

Query: 118 NCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKK 177
              G          RI +A  + K M   G  PDV+TY  LI+  C  G L  A  L+ K
Sbjct: 270 RVLGRA-------GRIDDAYGILKTMEDEGCGPDVVTYTVLIDALCAAGKLDKAKELYTK 322

Query: 178 MVSGDYENGLIS-----------------------------KTNIFSYSIIIDSLCKEGL 208
           M +  ++  L++                               ++ +Y+I++++LCK G 
Sbjct: 323 MRASSHKPDLVTYITLMSKFGNYGDLETVKRFWSEMEADGYAPDVVTYTILVEALCKSGK 382

Query: 209 VDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNV 268
           VD+A ++   M+ RGI P +    TLI G       +E   LF  M  LG  P   ++ +
Sbjct: 383 VDQAFDMLDVMRVRGIVPNLHTYNTLISGLLNLRRLDEALELFNNMESLGVAPTAYSYVL 442

Query: 269 MIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKG 328
            ID   K G   +A    E M +RG+ P     N+ +     +GRI  A++IF  +H+ G
Sbjct: 443 FIDYYGKLGDPEKALDTFEKMKKRGIMPSIAACNASLYSLAEMGRIREAKDIFNDIHNCG 502

Query: 329 CKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQ 388
                V+YN+++  Y K   +++A  L  +++S G    +I  N+L+  L++AG+   A 
Sbjct: 503 LSPDSVTYNMMMKCYSKAGQIDKATKLLTEMLSEGCEPDIIVVNSLIDTLYKAGRVDEAW 562

Query: 389 KLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGL 448
           ++F  +K   + P + TYNILI GL K   + +A+ LF  ++ +        FN L+D L
Sbjct: 563 QMFGRLKDLKLAPTVVTYNILITGLGKEGKLLKALDLFGSMKESGCPPNTVTFNALLDCL 622

Query: 449 CKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNV 508
           CK   +D A ++F ++      P V+TY+ +I+GL ++G+   A  F   M+K   +P+ 
Sbjct: 623 CKNDAVDLALKMFCRMTIMNCSPDVLTYNTIIYGLIKEGRAGYAFWFYHQMKKF-LSPDH 681

Query: 509 VTFNTLMHGFLQNNKTSK----VVELLHKMAEPERNLV 542
           VT  TL+ G +++ +       V+E +H+      N V
Sbjct: 682 VTLYTLLPGVVKDGRVEDAIKIVMEFVHQSGLQTSNQV 719



 Score =  188 bits (477), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 150/561 (26%), Positives = 252/561 (44%), Gaps = 69/561 (12%)

Query: 9    CLFSSETVSKVKLSSLFKSPRQIAAVSSPETQLNEFLHENCKSGIINLN----------- 57
            C  S ++V+   +   +    QI   +     L E L E C+  II +N           
Sbjct: 501  CGLSPDSVTYNMMMKCYSKAGQIDKATK---LLTEMLSEGCEPDIIVVNSLIDTLYKAGR 557

Query: 58   --EARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNI 115
              EA   FG +  ++ +P + ++N+L   + K       +  +  +   G  P+ +T N 
Sbjct: 558  VDEAWQMFGRLKDLKLAPTVVTYNILITGLGKEGKLLKALDLFGSMKESGCPPNTVTFNA 617

Query: 116  LINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLH 175
            L++C       LC  + +  A  +F  M      PDV+TY T+I G  + G    A   +
Sbjct: 618  LLDC-------LCKNDAVDLALKMFCRMTIMNCSPDVLTYNTIIYGLIKEGRAGYAFWFY 670

Query: 176  KKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRG------------ 223
             +M         +S  ++  Y+++   + K+G V+ A ++ +E   +             
Sbjct: 671  HQM------KKFLSPDHVTLYTLL-PGVVKDGRVEDAIKIVMEFVHQSGLQTSNQVWGEL 723

Query: 224  ---------INPAV-----VVCTT----------LIHGFCCAGNWEEVNGLFIEML-DLG 258
                     I  A+     +VC +          LI   C      +   LF +    LG
Sbjct: 724  MECILIEAEIEEAISFAEGLVCNSICQDDNLILPLIRVLCKQKKALDAKKLFDKFTKSLG 783

Query: 259  PRPNLLTFNVMIDCLCKGGKINEAN-GLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTA 317
              P   ++N ++D L  G  I EA   L   M   G  P+ FTYN L+D +    RID  
Sbjct: 784  THPTPESYNCLMDGLL-GCNITEAALKLFVEMKNAGCCPNIFTYNLLLDAHGKSKRIDEL 842

Query: 318  REIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSG 377
             E++  M  +GCK  ++++NI+I+   K  ++ +A+ LY +IIS     T  TY  L+ G
Sbjct: 843  FELYNEMLCRGCKPNIITHNIIISALVKSNSINKALDLYYEIISGDFSPTPCTYGPLIGG 902

Query: 378  LFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFG 437
            L +AG++  A K+F+EM  Y  +P+ + YNILI+G  K   V  A  LF  +        
Sbjct: 903  LLKAGRSEEAMKIFEEMPDYQCKPNCAIYNILINGFGKAGNVNIACDLFKRMIKEGIRPD 962

Query: 438  IEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLL 497
            ++ +  L++ L   GR+D+A   F +L   GL P  V+Y++MI+GL +  +LE+A     
Sbjct: 963  LKSYTILVECLFMTGRVDDAVHYFEELKLTGLDPDTVSYNLMINGLGKSRRLEEALSLFS 1022

Query: 498  YMEKNGCAPNVVTFNTLMHGF 518
             M+  G +P + T+N L+  F
Sbjct: 1023 EMKNRGISPELYTYNALILHF 1043



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 147/501 (29%), Positives = 232/501 (46%), Gaps = 33/501 (6%)

Query: 41   LNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRK 100
             N  L   CK+  ++L  A   F  MT M  SP + ++N +   + K         FY +
Sbjct: 615  FNALLDCLCKNDAVDL--ALKMFCRMTIMNCSPDVLTYNTIIYGLIKEGRAGYAFWFYHQ 672

Query: 101  LVSIGLLPDFLTLNILINCFGNKERGLCVENRIK--------------EATW--LFKNMI 144
            +    L PD +TL  L+       R   VE+ IK                 W  L + ++
Sbjct: 673  MKKF-LSPDHVTLYTLLPGVVKDGR---VEDAIKIVMEFVHQSGLQTSNQVWGELMECIL 728

Query: 145  AFGVRPDVITY--GTLINGFCRTGNLSVAL---------RLHKKMVSGDYENGLISKTNI 193
                  + I++  G + N  C+  NL + L          L  K +   +   L +    
Sbjct: 729  IEAEIEEAISFAEGLVCNSICQDDNLILPLIRVLCKQKKALDAKKLFDKFTKSLGTHPTP 788

Query: 194  FSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIE 253
             SY+ ++D L    + + A +LF+EMK  G  P +     L+     +   +E+  L+ E
Sbjct: 789  ESYNCLMDGLLGCNITEAALKLFVEMKNAGCCPNIFTYNLLLDAHGKSKRIDELFELYNE 848

Query: 254  MLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGR 313
            ML  G +PN++T N++I  L K   IN+A  L   +I    +P   TY  L+ G    GR
Sbjct: 849  MLCRGCKPNIITHNIIISALVKSNSINKALDLYYEIISGDFSPTPCTYGPLIGGLLKAGR 908

Query: 314  IDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNT 373
             + A +IF  M    CK     YNILING+ K  NV  A  L++++I  G+R  + +Y  
Sbjct: 909  SEEAMKIFEEMPDYQCKPNCAIYNILINGFGKAGNVNIACDLFKRMIKEGIRPDLKSYTI 968

Query: 374  LLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNK 433
            L+  LF  G+   A   F+E+KL  ++PD  +YN++I+GL K+  ++EA+ LF  ++   
Sbjct: 969  LVECLFMTGRVDDAVHYFEELKLTGLDPDTVSYNLMINGLGKSRRLEEALSLFSEMKNRG 1028

Query: 434  FEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKAN 493
                +  +N LI     AG +D A ++F +L   GL P V TY+ +I G  + G  ++A 
Sbjct: 1029 ISPELYTYNALILHFGNAGMVDQAGKMFEELQFMGLEPNVFTYNALIRGHSKSGNKDRAF 1088

Query: 494  DFLLYMEKNGCAPNVVTFNTL 514
                 M   GC+PN  TF  L
Sbjct: 1089 SVFKKMMIVGCSPNAGTFAQL 1109



 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 138/546 (25%), Positives = 250/546 (45%), Gaps = 54/546 (9%)

Query: 51  SGIINL---NEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLL 107
           SG++NL   +EA   F  M  +  +P   S+ L      K    +  +  + K+   G++
Sbjct: 410 SGLLNLRRLDEALELFNNMESLGVAPTAYSYVLFIDYYGKLGDPEKALDTFEKMKKRGIM 469

Query: 108 PDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGN 167
           P     N   + +   E G     RI+EA  +F ++   G+ PD +TY  ++  + + G 
Sbjct: 470 PSIAACNA--SLYSLAEMG-----RIREAKDIFNDIHNCGLSPDSVTYNMMMKCYSKAGQ 522

Query: 168 LSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPA 227
           +  A +L  +M+S   E       +I   + +ID+L K G VD+A ++F  +K   + P 
Sbjct: 523 IDKATKLLTEMLSEGCE------PDIIVVNSLIDTLYKAGRVDEAWQMFGRLKDLKLAPT 576

Query: 228 VVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEA----- 282
           VV    LI G    G   +   LF  M + G  PN +TFN ++DCLCK   ++ A     
Sbjct: 577 VVTYNILITGLGKEGKLLKALDLFGSMKESGCPPNTVTFNALLDCLCKNDAVDLALKMFC 636

Query: 283 --------------NGLLELMIQRG---------------LNPDRFTYNSLMDGYCLVGR 313
                         N ++  +I+ G               L+PD  T  +L+ G    GR
Sbjct: 637 RMTIMNCSPDVLTYNTIIYGLIKEGRAGYAFWFYHQMKKFLSPDHVTLYTLLPGVVKDGR 696

Query: 314 IDTAREIFLS-MHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYN 372
           ++ A +I +  +H  G + +   +  L+        +EEA+S    ++ N + Q      
Sbjct: 697 VEDAIKIVMEFVHQSGLQTSNQVWGELMECILIEAEIEEAISFAEGLVCNSICQDDNLIL 756

Query: 373 TLLSGLFQAGQAGYAQKLFDEM-KLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
            L+  L +  +A  A+KLFD+  K     P   +YN L+DGL   N  + A+KLF  ++ 
Sbjct: 757 PLIRVLCKQKKALDAKKLFDKFTKSLGTHPTPESYNCLMDGLLGCNITEAALKLFVEMKN 816

Query: 432 NKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEK 491
                 I  +N L+D   K+ R+D  +EL++++  +G  P ++T++I+I  L +   + K
Sbjct: 817 AGCCPNIFTYNLLLDAHGKSKRIDELFELYNEMLCRGCKPNIITHNIIISALVKSNSINK 876

Query: 492 ANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIV 551
           A D    +     +P   T+  L+ G L+  ++ + +++  +M  P+    P+   ++I+
Sbjct: 877 ALDLYYEIISGDFSPTPCTYGPLIGGLLKAGRSEEAMKIFEEM--PDYQCKPNCAIYNIL 934

Query: 552 VDLLAK 557
           ++   K
Sbjct: 935 INGFGK 940



 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 134/561 (23%), Positives = 239/561 (42%), Gaps = 86/561 (15%)

Query: 55  NLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLN 114
           +L   + F+  M     +P + ++ +L  A+ K+   D        +   G++P+  T N
Sbjct: 347 DLETVKRFWSEMEADGYAPDVVTYTILVEALCKSGKVDQAFDMLDVMRVRGIVPNLHTYN 406

Query: 115 ILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRL 174
            LI+       GL    R+ EA  LF NM + GV P   +Y   I+ + + G+   AL  
Sbjct: 407 TLIS-------GLLNLRRLDEALELFNNMESLGVAPTAYSYVLFIDYYGKLGDPEKALDT 459

Query: 175 HKKM------------------------------VSGDYENGLISKTNIFSYSIIIDSLC 204
            +KM                              +  D  N  +S  ++ +Y++++    
Sbjct: 460 FEKMKKRGIMPSIAACNASLYSLAEMGRIREAKDIFNDIHNCGLSPDSV-TYNMMMKCYS 518

Query: 205 KEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLL 264
           K G +DKA +L  EM   G  P ++V  +LI     AG  +E   +F  + DL   P ++
Sbjct: 519 KAGQIDKATKLLTEMLSEGCEPDIIVVNSLIDTLYKAGRVDEAWQMFGRLKDLKLAPTVV 578

Query: 265 TFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSM 324
           T+N++I  L K GK+ +A  L   M + G  P+  T+N+L+D  C    +D A ++F  M
Sbjct: 579 TYNILITGLGKEGKLLKALDLFGSMKESGCPPNTVTFNALLDCLCKNDAVDLALKMFCRM 638

Query: 325 HSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQA 384
               C   V++YN +I G  K      A   Y Q+    +    +T  TLL G+ + G+ 
Sbjct: 639 TIMNCSPDVLTYNTIIYGLIKEGRAGYAFWFYHQM-KKFLSPDHVTLYTLLPGVVKDGRV 697

Query: 385 GYAQKLFDE-----------------MKLYNVEPDLSTYNILIDGL-------------- 413
             A K+  E                 M+   +E ++       +GL              
Sbjct: 698 EDAIKIVMEFVHQSGLQTSNQVWGELMECILIEAEIEEAISFAEGLVCNSICQDDNLILP 757

Query: 414 -----CKNNCVQEAVKLFHMLEMNKFEFGI------EIFNCLIDGLCKAGRLDNAWELFH 462
                CK     +A KLF     +KF   +      E +NCL+DGL      + A +LF 
Sbjct: 758 LIRVLCKQKKALDAKKLF-----DKFTKSLGTHPTPESYNCLMDGLLGCNITEAALKLFV 812

Query: 463 KLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNN 522
           ++   G  P + TY++++    +  ++++  +    M   GC PN++T N ++   +++N
Sbjct: 813 EMKNAGCCPNIFTYNLLLDAHGKSKRIDELFELYNEMLCRGCKPNIITHNIIISALVKSN 872

Query: 523 KTSKVVELLHKMAEPERNLVP 543
             +K ++L +++   + +  P
Sbjct: 873 SINKALDLYYEIISGDFSPTP 893



 Score =  128 bits (322), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 96/386 (24%), Positives = 167/386 (43%), Gaps = 37/386 (9%)

Query: 207 GLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTF 266
           G V+    +F  M+ + IN       T+       G   +      +M   G   N  ++
Sbjct: 136 GRVEDMAFVFDLMQKQVINRNPNTYLTIFKALSIKGGIRQAPFALGKMRQAGFVLNAYSY 195

Query: 267 NVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGY------------------ 308
           N +I  L + G   EA  + + MI  GL P   TY++LM                     
Sbjct: 196 NGLIYFLLQPGFCKEALKVYKRMISEGLKPSMKTYSALMVALGRRRDTGTIMDLLEEMET 255

Query: 309 ------------CL-----VGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEE 351
                       C+      GRID A  I  +M  +GC   VV+Y +LI+  C    +++
Sbjct: 256 LGLRPNIYTYTICIRVLGRAGRIDDAYGILKTMEDEGCGPDVVTYTVLIDALCAAGKLDK 315

Query: 352 AMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILID 411
           A  LY ++ ++  +  ++TY TL+S     G     ++ + EM+     PD+ TY IL++
Sbjct: 316 AKELYTKMRASSHKPDLVTYITLMSKFGNYGDLETVKRFWSEMEADGYAPDVVTYTILVE 375

Query: 412 GLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVP 471
            LCK+  V +A  +  ++ +      +  +N LI GL    RLD A ELF+ +   G+ P
Sbjct: 376 ALCKSGKVDQAFDMLDVMRVRGIVPNLHTYNTLISGLLNLRRLDEALELFNNMESLGVAP 435

Query: 472 TVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELL 531
           T  +Y + I    + G  EKA D    M+K G  P++   N  ++   +  +  +  ++ 
Sbjct: 436 TAYSYVLFIDYYGKLGDPEKALDTFEKMKKRGIMPSIAACNASLYSLAEMGRIREAKDIF 495

Query: 532 HKMAEPERNLVPDDTTFSIVVDLLAK 557
           + +      L PD  T+++++   +K
Sbjct: 496 NDIHNC--GLSPDSVTYNMMMKCYSK 519



 Score =  125 bits (315), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 91/316 (28%), Positives = 148/316 (46%), Gaps = 35/316 (11%)

Query: 55   NLNEARY-FFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTL 113
            N+ EA    F  M +    P I ++NLL  A  K++  D +   Y +++  G  P+ +T 
Sbjct: 802  NITEAALKLFVEMKNAGCCPNIFTYNLLLDAHGKSKRIDELFELYNEMLCRGCKPNIITH 861

Query: 114  NILINC----------------------------FGNKERGLCVENRIKEATWLFKNMIA 145
            NI+I+                             +G    GL    R +EA  +F+ M  
Sbjct: 862  NIIISALVKSNSINKALDLYYEIISGDFSPTPCTYGPLIGGLLKAGRSEEAMKIFEEMPD 921

Query: 146  FGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCK 205
            +  +P+   Y  LINGF + GN+++A  L K+M+    + G+  + ++ SY+I+++ L  
Sbjct: 922  YQCKPNCAIYNILINGFGKAGNVNIACDLFKRMI----KEGI--RPDLKSYTILVECLFM 975

Query: 206  EGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLT 265
             G VD A   F E+K  G++P  V    +I+G   +   EE   LF EM + G  P L T
Sbjct: 976  TGRVDDAVHYFEELKLTGLDPDTVSYNLMINGLGKSRRLEEALSLFSEMKNRGISPELYT 1035

Query: 266  FNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMH 325
            +N +I      G +++A  + E +   GL P+ FTYN+L+ G+   G  D A  +F  M 
Sbjct: 1036 YNALILHFGNAGMVDQAGKMFEELQFMGLEPNVFTYNALIRGHSKSGNKDRAFSVFKKMM 1095

Query: 326  SKGCKHTVVSYNILIN 341
              GC     ++  L N
Sbjct: 1096 IVGCSPNAGTFAQLPN 1111



 Score =  122 bits (306), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 90/341 (26%), Positives = 153/341 (44%), Gaps = 51/341 (14%)

Query: 261 PNLL----TFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDT 316
           PN++    T N M++ L   G++ +   + +LM ++ +N +  TY ++     + G I  
Sbjct: 116 PNIVHTPETCNYMLEFLRVHGRVEDMAFVFDLMQKQVINRNPNTYLTIFKALSIKGGIRQ 175

Query: 317 AREIFLSMHSKGCKHTVVSYNILI-----NGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
           A      M   G      SYN LI      G+CK     EA+ +Y+++IS G++ ++ TY
Sbjct: 176 APFALGKMRQAGFVLNAYSYNGLIYFLLQPGFCK-----EALKVYKRMISEGLKPSMKTY 230

Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
           + L+  L +    G    L +EM+   + P++ TY I I  L +   + +A  +   +E 
Sbjct: 231 SALMVALGRRRDTGTIMDLLEEMETLGLRPNIYTYTICIRVLGRAGRIDDAYGILKTMED 290

Query: 432 NKFEFGIEIFNCLIDGLCKAGRLDNAWELFHK---------------------------- 463
                 +  +  LID LC AG+LD A EL+ K                            
Sbjct: 291 EGCGPDVVTYTVLIDALCAAGKLDKAKELYTKMRASSHKPDLVTYITLMSKFGNYGDLET 350

Query: 464 -------LPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMH 516
                  +   G  P VVTY+I++  LC+ GK+++A D L  M   G  PN+ T+NTL+ 
Sbjct: 351 VKRFWSEMEADGYAPDVVTYTILVEALCKSGKVDQAFDMLDVMRVRGIVPNLHTYNTLIS 410

Query: 517 GFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAK 557
           G L   +  + +EL + M      + P   ++ + +D   K
Sbjct: 411 GLLNLRRLDEALELFNNME--SLGVAPTAYSYVLFIDYYGK 449



 Score = 58.9 bits (141), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 68/317 (21%), Positives = 117/317 (36%), Gaps = 51/317 (16%)

Query: 299 FTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYN----------ILINGYCKILN 348
           F   S  +G  ++ +    R++ L +    C H VV  N           +I     I +
Sbjct: 42  FKMKSFPNGSSVIWKKHGKRQLGLRVFETRCAHEVVVVNGKSKSSVSSEEVIGALKSISD 101

Query: 349 VEEAMSLYRQIIS-NGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYN 407
              A+S ++ +     +  T  T N +L  L   G+      +FD M+   +  + +TY 
Sbjct: 102 PNSALSYFKMVSQLPNIVHTPETCNYMLEFLRVHGRVEDMAFVFDLMQKQVINRNPNTYL 161

Query: 408 ILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQK 467
            +   L     +++A      +    F      +N LI  L + G    A +++ ++  +
Sbjct: 162 TIFKALSIKGGIRQAPFALGKMRQAGFVLNAYSYNGLIYFLLQPGFCKEALKVYKRMISE 221

Query: 468 GLVPT-----------------------------------VVTYSIMIHGLCRKGKLEKA 492
           GL P+                                   + TY+I I  L R G+++ A
Sbjct: 222 GLKPSMKTYSALMVALGRRRDTGTIMDLLEEMETLGLRPNIYTYTICIRVLGRAGRIDDA 281

Query: 493 NDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVV 552
              L  ME  GC P+VVT+  L+       K  K  EL  KM        PD  T+   +
Sbjct: 282 YGILKTMEDEGCGPDVVTYTVLIDALCAAGKLDKAKELYTKMRASSHK--PDLVTY---I 336

Query: 553 DLLAKDEKYHECSAVSK 569
            L++K   Y +   V +
Sbjct: 337 TLMSKFGNYGDLETVKR 353


>gi|147862640|emb|CAN81487.1| hypothetical protein VITISV_033285 [Vitis vinifera]
          Length = 1024

 Score =  249 bits (635), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 169/566 (29%), Positives = 274/566 (48%), Gaps = 51/566 (9%)

Query: 56  LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNI 115
           +NEA+  F  M      P  ++ + L     +    D V+     +VS G+  + +T N+
Sbjct: 314 MNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNV 373

Query: 116 LINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLH 175
           LI+       GLC   ++++A  + K M+  G +P+  T+  LI G+CR  N+  AL L 
Sbjct: 374 LIH-------GLCKFGKMEKAAEILKGMVTLGCKPNSRTFCLLIEGYCREHNMGRALELL 426

Query: 176 KKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLI 235
            +M   +  N + S     SY  +I+ LC    +  A +L  +M   G+ P VVV + LI
Sbjct: 427 DEM---EKRNLVPSAV---SYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSILI 480

Query: 236 HGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLN 295
             +   G  EE   L   M   G  P++  +N +I CL K GK+ EA+  L  +  RGL 
Sbjct: 481 MAYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLK 540

Query: 296 PDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSL 355
           PD  T+ + + GY   G++  A + F  M   G       Y +LING+ K  N+ EA+S+
Sbjct: 541 PDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSI 600

Query: 356 YRQI-------------------ISNGVRQT----------------VITYNTLLSGLFQ 380
           +R++                   + NG  Q                 V TY++L+SG  +
Sbjct: 601 FRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCK 660

Query: 381 AGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEI 440
            G+   A +L DEM L  + P++  YN L+DGLCK+  +Q A KLF  +     E     
Sbjct: 661 QGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVT 720

Query: 441 FNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYME 500
           ++ +IDG CK+  +  A+ LFH++P KG+ P    Y+ ++HG C++G +EKA +    M 
Sbjct: 721 YSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREML 780

Query: 501 KNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEK 560
           + G A   ++FNTL+ G+ ++ K  +  +L  +M    + ++PD  T++ V+D   K  K
Sbjct: 781 QKGFA-TTLSFNTLIDGYCKSCKIQEASQLFQEMIA--KQIMPDHVTYTTVIDWHCKAGK 837

Query: 561 YHECSAVSKSSYRACLYVTIFQPSSL 586
             E + + K      L V     +SL
Sbjct: 838 MEEANLLFKEMQERNLIVDTVTYTSL 863



 Score =  231 bits (590), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 156/515 (30%), Positives = 245/515 (47%), Gaps = 17/515 (3%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CK+G  +L  A+     M     +P    ++L+   + +    D  +   R +   GL+P
Sbjct: 239 CKTG--DLRGAKRVLIEMDEKGLNPNEFIYSLVIEGMCQVGDIDEAVELKRSMGEKGLVP 296

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           +  T  I+         GLC   R+ EA   F+ M   G++PD      LI+GF R G++
Sbjct: 297 NTYTYTIIT-------AGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDI 349

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
              LR+   MVS           N+ +Y+++I  LCK G ++KA E+   M   G  P  
Sbjct: 350 DEVLRIKDVMVSCGI------PINLITYNVLIHGLCKFGKMEKAAEILKGMVTLGCKPNS 403

Query: 229 VVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLEL 288
                LI G+C   N      L  EM      P+ +++  MI+ LC    ++ AN LLE 
Sbjct: 404 RTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEK 463

Query: 289 MIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILN 348
           M   GL P+   Y+ L+  Y   GRI+ AR +   M   G    +  YN +I+   K   
Sbjct: 464 MTFSGLKPNVVVYSILIMAYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGK 523

Query: 349 VEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNI 408
           +EEA +   +I   G++   +T+   + G  + G+   A K FDEM  + + P+   Y +
Sbjct: 524 MEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTV 583

Query: 409 LIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKG 468
           LI+G  K   + EA+ +F  L        ++  +  I GL K GR+  A ++F +L +KG
Sbjct: 584 LINGHFKAGNLMEALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKG 643

Query: 469 LVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVV 528
           LVP V TYS +I G C++G++EKA +    M   G APN+  +N L+ G  ++    +  
Sbjct: 644 LVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRAR 703

Query: 529 ELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
           +L   M  PE+ L PD  T+S ++D   K E   E
Sbjct: 704 KLFDGM--PEKGLEPDSVTYSTMIDGYCKSENVAE 736



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 153/533 (28%), Positives = 251/533 (47%), Gaps = 51/533 (9%)

Query: 56   LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNI 115
            + EAR     M+    +P I  +N +   ++K    +   ++  ++   GL PD +T   
Sbjct: 489  IEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGA 548

Query: 116  LINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLH 175
             I   G  + G     ++ EA   F  M+  G+ P+   Y  LING  + GNL  AL + 
Sbjct: 549  FI--LGYSKTG-----KMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIF 601

Query: 176  KKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLI 235
            +++      + L    ++ + S  I  L K G V +A ++F E+K +G+ P V   ++LI
Sbjct: 602  RRL------HALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLI 655

Query: 236  HGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLN 295
             GFC  G  E+   L  EM   G  PN+  +N ++D LCK G I  A  L + M ++GL 
Sbjct: 656  SGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLE 715

Query: 296  PDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSL 355
            PD  TY++++DGYC    +  A  +F  M SKG +     YN L++G CK  ++E+AM+L
Sbjct: 716  PDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNL 775

Query: 356  YRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCK 415
            +R+++  G   T +++NTL+ G  ++ +   A +LF EM    + PD  TY  +ID  CK
Sbjct: 776  FREMLQKGF-ATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCK 834

Query: 416  NNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVT 475
               ++EA  LF  ++          +  L+ G  K G+    + LF K+  KG+ P  VT
Sbjct: 835  AGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVT 894

Query: 476  YSIMIH-----------------------------------GLCRKGKLEKANDFLLYME 500
            Y ++I+                                    LC++  L +A+  L  M 
Sbjct: 895  YGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMG 954

Query: 501  KNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
            + G  P++   NTL+  F +  K  +   +   +      LVPD TT   +V+
Sbjct: 955  ELGLKPSLAACNTLVRSFHEAGKMDEATRVFEGV--KSLGLVPDTTTLIDLVN 1005



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 133/460 (28%), Positives = 223/460 (48%), Gaps = 52/460 (11%)

Query: 59   ARYFFGYMTH-MQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILI 117
            A+YF   + H + P+ P+  + +L     K  +    +S +R+L ++G+LPD  T +  I
Sbjct: 563  AKYFDEMLDHGLMPNNPL--YTVLINGHFKAGNLMEALSIFRRLHALGVLPDVQTCSAFI 620

Query: 118  NCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKK 177
            +       GL    R++EA  +F  +   G+ PDV TY +LI+GFC+ G +  A  LH +
Sbjct: 621  H-------GLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDE 673

Query: 178  MVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHG 237
            M       G+    NIF Y+ ++D LCK G + +A++LF  M  +G+ P  V  +T+I G
Sbjct: 674  MCL----KGI--APNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDG 727

Query: 238  FCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPD 297
            +C + N  E   LF EM   G +P+   +N ++   CK G + +A  L   M+Q+G    
Sbjct: 728  YCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGF-AT 786

Query: 298  RFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYR 357
              ++N+L+DGYC   +I  A ++F  M +K      V+Y  +I+ +CK   +EEA  L++
Sbjct: 787  TLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFK 846

Query: 358  QIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTY----------- 406
            ++    +    +TY +L+ G  + GQ+     LF++M    V+PD  TY           
Sbjct: 847  EMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKED 906

Query: 407  ------------------------NILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFN 442
                                    ++LI  LCK   + EA KL   +     +  +   N
Sbjct: 907  NLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACN 966

Query: 443  CLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHG 482
             L+    +AG++D A  +F  +   GLVP   T   +++G
Sbjct: 967  TLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVNG 1006



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 123/427 (28%), Positives = 214/427 (50%), Gaps = 8/427 (1%)

Query: 126 GLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYEN 185
            LC    ++ A  +   M   G+ P+   Y  +I G C+ G++  A+ L + M     E 
Sbjct: 237 ALCKTGDLRGAKRVLIEMDEKGLNPNEFIYSLVIEGMCQVGDIDEAVELKRSM----GEK 292

Query: 186 GLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWE 245
           GL+   N ++Y+II   LC+   +++AK  F EM+  G+ P    C+ LI GF   G+ +
Sbjct: 293 GLVP--NTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDID 350

Query: 246 EVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLM 305
           EV  +   M+  G   NL+T+NV+I  LCK GK+ +A  +L+ M+  G  P+  T+  L+
Sbjct: 351 EVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMVTLGCKPNSRTFCLLI 410

Query: 306 DGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVR 365
           +GYC    +  A E+   M  +    + VSY  +ING C   ++  A  L  ++  +G++
Sbjct: 411 EGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLK 470

Query: 366 QTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKL 425
             V+ Y+ L+      G+   A++L D M    V PD+  YN +I  L K   ++EA   
Sbjct: 471 PNVVVYSILIMAYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTY 530

Query: 426 FHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCR 485
              ++    +     F   I G  K G++  A + F ++   GL+P    Y+++I+G  +
Sbjct: 531 LLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFK 590

Query: 486 KGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDD 545
            G L +A      +   G  P+V T +  +HG L+N +  + +++  ++   E+ LVPD 
Sbjct: 591 AGNLMEALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSEL--KEKGLVPDV 648

Query: 546 TTFSIVV 552
            T+S ++
Sbjct: 649 FTYSSLI 655



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 100/362 (27%), Positives = 192/362 (53%), Gaps = 2/362 (0%)

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
           ++++Y+ ++ +LCK G +  AK + +EM  +G+NP   + + +I G C  G+ +E   L 
Sbjct: 227 DVYTYTYLVGALCKTGDLRGAKRVLIEMDEKGLNPNEFIYSLVIEGMCQVGDIDEAVELK 286

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
             M + G  PN  T+ ++   LC+  ++NEA    E M + GL PD    ++L+DG+   
Sbjct: 287 RSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMRE 346

Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
           G ID    I   M S G    +++YN+LI+G CK   +E+A  + + +++ G +    T+
Sbjct: 347 GDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMVTLGCKPNSRTF 406

Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
             L+ G  +    G A +L DEM+  N+ P   +Y  +I+GLC    +  A KL   +  
Sbjct: 407 CLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTF 466

Query: 432 NKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEK 491
           +  +  + +++ LI      GR++ A  L   +   G+ P +  Y+ +I  L + GK+E+
Sbjct: 467 SGLKPNVVVYSILIMAYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEE 526

Query: 492 ANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIV 551
           A+ +LL ++  G  P+ VTF   + G+ +  K ++  +   +M   +  L+P++  ++++
Sbjct: 527 ASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEML--DHGLMPNNPLYTVL 584

Query: 552 VD 553
           ++
Sbjct: 585 IN 586



 Score =  165 bits (417), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 105/371 (28%), Positives = 182/371 (49%), Gaps = 2/371 (0%)

Query: 196 YSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEML 255
           + I+IDS  + G++D+A  +F   K   I  +++ C +L+      G  E    ++  ML
Sbjct: 161 FDILIDSYKRMGMLDEAANVFFVAKNDSILISLIRCNSLLKDLLKCGMMELFWKVYNGML 220

Query: 256 DLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRID 315
           D     ++ T+  ++  LCK G +  A  +L  M ++GLNP+ F Y+ +++G C VG ID
Sbjct: 221 DAKMGFDVYTYTYLVGALCKTGDLRGAKRVLIEMDEKGLNPNEFIYSLVIEGMCQVGDID 280

Query: 316 TAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLL 375
            A E+  SM  KG      +Y I+  G C+   + EA   + ++   G++      + L+
Sbjct: 281 EAVELKRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALI 340

Query: 376 SGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFE 435
            G  + G      ++ D M    +  +L TYN+LI GLCK   +++A ++   +     +
Sbjct: 341 DGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMVTLGCK 400

Query: 436 FGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDF 495
                F  LI+G C+   +  A EL  ++ ++ LVP+ V+Y  MI+GLC    L  AN  
Sbjct: 401 PNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKL 460

Query: 496 LLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLL 555
           L  M  +G  PNVV ++ L+  +    +  +   LL  M+     + PD   ++ ++  L
Sbjct: 461 LEKMTFSGLKPNVVVYSILIMAYASEGRIEEARRLLDGMSCS--GVAPDIFCYNAIISCL 518

Query: 556 AKDEKYHECSA 566
           +K  K  E S 
Sbjct: 519 SKAGKMEEAST 529



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 84/347 (24%), Positives = 157/347 (45%), Gaps = 51/347 (14%)

Query: 49   CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
            CKSG  ++  AR  F  M      P   +++ +     K+ +     S + ++ S G+ P
Sbjct: 694  CKSG--DIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQP 751

Query: 109  DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
                 N L++       G C E  +++A  LF+ M+  G     +++ TLI+G+C++  +
Sbjct: 752  HSFVYNALVH-------GCCKEGDMEKAMNLFREMLQKGF-ATTLSFNTLIDGYCKSCKI 803

Query: 169  SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
              A +L ++M++           +  +Y+ +ID  CK G +++A  LF EM+ R +    
Sbjct: 804  QEASQLFQEMIAKQI------MPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDT 857

Query: 229  VVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTF---------------------- 266
            V  T+L++G+   G   EV  LF +M+  G +P+ +T+                      
Sbjct: 858  VTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDE 917

Query: 267  -------------NVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGR 313
                         +++I  LCK   + EA+ LL+ M + GL P     N+L+  +   G+
Sbjct: 918  VVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACNTLVRSFHEAGK 977

Query: 314  IDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQII 360
            +D A  +F  + S G      +   L+NG     + E+A +L +Q++
Sbjct: 978  MDEATRVFEGVKSLGLVPDTTTLIDLVNGNLNDTDSEDARNLIKQLV 1024


>gi|302760809|ref|XP_002963827.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
 gi|300169095|gb|EFJ35698.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
          Length = 616

 Score =  248 bits (634), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 152/504 (30%), Positives = 251/504 (49%), Gaps = 49/504 (9%)

Query: 66  MTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKER 125
           + H   SP + +F +L     K       + F R L    + PD    N+LI+       
Sbjct: 53  LLHSGCSPNLVTFKILIRGNCKAGQAMRALEFLRALDEFSVAPDVYIFNVLIH------- 105

Query: 126 GLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYEN 185
           GL  +    +A  LF+NM +  V+P+++TY T+I+G C++GNL  A  L ++M+      
Sbjct: 106 GLFKDGNPDQAVKLFENMESSRVKPEIVTYNTVISGLCKSGNLEKARELLEEMI----RK 161

Query: 186 GLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWE 245
           G  S  +I +Y+ +I++  +   + +A     +MK  GINP V+ C  L+ G C  G+ E
Sbjct: 162 GGKSAPDIVTYNTLINAFYRASRIREACAFREKMKAAGINPDVLTCNILVSGICKDGDVE 221

Query: 246 EVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLM 305
           E   +   M   GP P+++T+N +I  LC  GK+ EA  +L+ M     +PD  T+N+L+
Sbjct: 222 EALEILDGMKLAGPVPDVITYNSIIHALCVAGKVVEAAEILKTM---SCSPDLVTFNTLL 278

Query: 306 DGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNV---------------- 349
           DG+C  G +  A E+   M  +     V++Y IL+NG C++  V                
Sbjct: 279 DGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYI 338

Query: 350 -------------------EEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKL 390
                              EEA  L +++   G R  V+ Y++L+SG  +AG    A+++
Sbjct: 339 PDVIAYTSLVDGLCKSGEIEEAHKLVKEMSVRGCRTGVVMYSSLVSGYCRAGNVHKAREI 398

Query: 391 FDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCK 450
             EM   N+ P L TYNI++ GL K+  + +AV L   L    +   +  +N LIDGLCK
Sbjct: 399 LAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCK 458

Query: 451 AGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVT 510
           A R+  A +L  ++  +G  P  VT   ++ GLCR G+++ A   ++ M +   APNVV 
Sbjct: 459 ANRVREACDLADEMASRGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVV 518

Query: 511 FNTLMHGFLQNNKTSKVVELLHKM 534
           + +L+ G  ++++      +L  M
Sbjct: 519 YTSLIDGLCKSDRMDDACMVLDAM 542



 Score =  246 bits (627), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 151/480 (31%), Positives = 245/480 (51%), Gaps = 20/480 (4%)

Query: 75  ISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIK 134
           + S+N L   + K+ H+      Y+ L+  G  P+ +T  ILI       RG C   +  
Sbjct: 27  VHSYNHLLDILVKSGHHFRTGKVYKDLLHSGCSPNLVTFKILI-------RGNCKAGQAM 79

Query: 135 EATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIF 194
            A    + +  F V PDV  +  LI+G  + GN   A++L + M S         K  I 
Sbjct: 80  RALEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFENMESSRV------KPEIV 133

Query: 195 SYSIIIDSLCKEGLVDKAKELFLEM--KGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
           +Y+ +I  LCK G ++KA+EL  EM  KG    P +V   TLI+ F  A    E      
Sbjct: 134 TYNTVISGLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRASRIREACAFRE 193

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
           +M   G  P++LT N+++  +CK G + EA  +L+ M   G  PD  TYNS++   C+ G
Sbjct: 194 KMKAAGINPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITYNSIIHALCVAG 253

Query: 313 RIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYN 372
           ++  A EI  +M    C   +V++N L++G+CK   +  A+ +  ++    +   VITY 
Sbjct: 254 KVVEAAEILKTM---SCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYT 310

Query: 373 TLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMN 432
            L++GL + GQ   A  L +E+      PD+  Y  L+DGLCK+  ++EA KL   + + 
Sbjct: 311 ILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSVR 370

Query: 433 KFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKA 492
               G+ +++ L+ G C+AG +  A E+  ++    +VP + TY+I++ GL + G + KA
Sbjct: 371 GCRTGVVMYSSLVSGYCRAGNVHKAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKA 430

Query: 493 NDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVV 552
              +  +   G  P+VVT+NTL+ G  + N+  +  +L  +MA   R   P+D T   VV
Sbjct: 431 VSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMA--SRGCFPNDVTLGSVV 488



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 140/476 (29%), Positives = 232/476 (48%), Gaps = 20/476 (4%)

Query: 49  CKSGIINLNEARYFFGYMTHM--QPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGL 106
           CKSG  NL +AR     M     + +P I ++N L  A  +        +F  K+ + G+
Sbjct: 143 CKSG--NLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRASRIREACAFREKMKAAGI 200

Query: 107 LPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTG 166
            PD LT NIL++       G+C +  ++EA  +   M   G  PDVITY ++I+  C  G
Sbjct: 201 NPDVLTCNILVS-------GICKDGDVEEALEILDGMKLAGPVPDVITYNSIIHALCVAG 253

Query: 167 NLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINP 226
            +  A  + K M             ++ +++ ++D  CK G++ +A E+  EM    I P
Sbjct: 254 KVVEAAEILKTMSC---------SPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILP 304

Query: 227 AVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLL 286
            V+  T L++G C  G  +    L  E++  G  P+++ +  ++D LCK G+I EA+ L+
Sbjct: 305 DVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLV 364

Query: 287 ELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKI 346
           + M  RG       Y+SL+ GYC  G +  AREI   M S      + +YNI++ G  K 
Sbjct: 365 KEMSVRGCRTGVVMYSSLVSGYCRAGNVHKAREILAEMVSINMVPPLFTYNIVLGGLIKD 424

Query: 347 LNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTY 406
            ++ +A+SL   +++ G    V+TYNTL+ GL +A +   A  L DEM      P+  T 
Sbjct: 425 GSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASRGCFPNDVTL 484

Query: 407 NILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQ 466
             ++ GLC+   V +A  L   +   +    + ++  LIDGLCK+ R+D+A  +   +  
Sbjct: 485 GSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACMVLDAMRG 544

Query: 467 KGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNN 522
           +G+      Y  +I  +   G++ +A      M   G  P+  T  TL    + N+
Sbjct: 545 QGVALDDFAYRKLIVSMSHGGRVAEAMAMYDEMVARGFLPDGSTSKTLEEAAMSNS 600



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 117/406 (28%), Positives = 200/406 (49%), Gaps = 42/406 (10%)

Query: 190 KTNIFSYSIIIDSL-----------------------------------CKEGLVDKAKE 214
           K ++ SY+ ++D L                                   CK G   +A E
Sbjct: 24  KHDVHSYNHLLDILVKSGHHFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQAMRALE 83

Query: 215 LFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLC 274
               +    + P V +   LIHG    GN ++   LF  M     +P ++T+N +I  LC
Sbjct: 84  FLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFENMESSRVKPEIVTYNTVISGLC 143

Query: 275 KGGKINEANGLLELMIQRGLN--PDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHT 332
           K G + +A  LLE MI++G    PD  TYN+L++ +    RI  A      M + G    
Sbjct: 144 KSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRASRIREACAFREKMKAAGINPD 203

Query: 333 VVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFD 392
           V++ NIL++G CK  +VEEA+ +   +   G    VITYN+++  L  AG+   A ++  
Sbjct: 204 VLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITYNSIIHALCVAGKVVEAAEI-- 261

Query: 393 EMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAG 452
            +K  +  PDL T+N L+DG CK   +  A+++   +        +  +  L++GLC+ G
Sbjct: 262 -LKTMSCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVG 320

Query: 453 RLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFN 512
           ++  A+ L  ++ ++G +P V+ Y+ ++ GLC+ G++E+A+  +  M   GC   VV ++
Sbjct: 321 QVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSVRGCRTGVVMYS 380

Query: 513 TLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKD 558
           +L+ G+ +     K  E+L +M     N+VP   T++IV+  L KD
Sbjct: 381 SLVSGYCRAGNVHKAREILAEMVSI--NMVPPLFTYNIVLGGLIKD 424



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 91/302 (30%), Positives = 165/302 (54%), Gaps = 7/302 (2%)

Query: 258 GPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTA 317
           G + ++ ++N ++D L K G       + + ++  G +P+  T+  L+ G C  G+   A
Sbjct: 22  GYKHDVHSYNHLLDILVKSGHHFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQAMRA 81

Query: 318 REIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSG 377
            E   ++        V  +N+LI+G  K  N ++A+ L+  + S+ V+  ++TYNT++SG
Sbjct: 82  LEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFENMESSRVKPEIVTYNTVISG 141

Query: 378 LFQAGQAGYAQKLFDEM--KLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFE 435
           L ++G    A++L +EM  K     PD+ TYN LI+   + + ++EA      ++     
Sbjct: 142 LCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRASRIREACAFREKMKAAGIN 201

Query: 436 FGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDF 495
             +   N L+ G+CK G ++ A E+   +   G VP V+TY+ +IH LC  GK+ +A + 
Sbjct: 202 PDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITYNSIIHALCVAGKVVEAAEI 261

Query: 496 LLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLL 555
           L  M    C+P++VTFNTL+ GF +     + +E+L +M     N++PD  T++I+V+ L
Sbjct: 262 LKTMS---CSPDLVTFNTLLDGFCKAGMLPRALEVLEEMC--RENILPDVITYTILVNGL 316

Query: 556 AK 557
            +
Sbjct: 317 CR 318



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 81/263 (30%), Positives = 140/263 (53%), Gaps = 9/263 (3%)

Query: 313 RIDTAREIF-LSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
           R D A + F  +    G KH V SYN L++   K  +      +Y+ ++ +G    ++T+
Sbjct: 6   RPDLAIQFFDWAGEQDGYKHDVHSYNHLLDILVKSGHHFRTGKVYKDLLHSGCSPNLVTF 65

Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
             L+ G  +AGQA  A +    +  ++V PD+  +N+LI GL K+    +AVKLF  +E 
Sbjct: 66  KILIRGNCKAGQAMRALEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFENMES 125

Query: 432 NKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKG--LVPTVVTYSIMIHGLCRKGKL 489
           ++ +  I  +N +I GLCK+G L+ A EL  ++ +KG    P +VTY+ +I+   R  ++
Sbjct: 126 SRVKPEIVTYNTVISGLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRASRI 185

Query: 490 EKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLH--KMAEPERNLVPDDTT 547
            +A  F   M+  G  P+V+T N L+ G  ++    + +E+L   K+A P    VPD  T
Sbjct: 186 REACAFREKMKAAGINPDVLTCNILVSGICKDGDVEEALEILDGMKLAGP----VPDVIT 241

Query: 548 FSIVVDLLAKDEKYHECSAVSKS 570
           ++ ++  L    K  E + + K+
Sbjct: 242 YNSIIHALCVAGKVVEAAEILKT 264


>gi|357505881|ref|XP_003623229.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355498244|gb|AES79447.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 770

 Score =  248 bits (634), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 161/530 (30%), Positives = 255/530 (48%), Gaps = 40/530 (7%)

Query: 56  LNEARYFFGYMTHMQPS--PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTL 113
           L+E+   F +     P+  P  SS N L   + K +HYD VIS + K+ S+ + P F +L
Sbjct: 38  LSESLSHFHHTLQDYPNSIPSYSSCNTLIDNLRKAKHYDHVISVHSKMASVSVFPCFTSL 97

Query: 114 NILINCFGNKE----------------------------RGLCVENRIKEATWLFKNMIA 145
           + LI  F N +                            +G C      +A  LF  M  
Sbjct: 98  SALIESFVNTQKPSFAFGVLGLIMKRGFHLNVYNFNLLLKGFCQSGDSHKAMDLFCMMKR 157

Query: 146 FGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCK 205
             + PD ++Y T+ING C+   L  A  L K+M  G+       K N  ++S +ID  CK
Sbjct: 158 NCLIPDCVSYNTVINGLCKGKRLVEAKELFKEMKGGE------CKPNSVTFSALIDGFCK 211

Query: 206 EGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLT 265
            G V++   L  EM+  G+   V V + LI GFC  G+ E    LF EML     PN++T
Sbjct: 212 NGDVEEGFGLLEEMEKMGLEGDVFVYSALISGFCSKGDIERGKELFNEMLRKNVTPNVVT 271

Query: 266 FNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMH 325
           ++ +++ LCK  K  EA  +L+ M    + PD   Y  L DG    GR   A ++   M 
Sbjct: 272 YSCLMNALCKKQKWKEAAQMLDTMTGCKVRPDVVAYTVLADGLSKNGRASDAIKVLDLMV 331

Query: 326 SKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAG 385
            +G +   V+YN +ING CK   V++A+ +   +   G +  V+TY+TL+ GL   G+  
Sbjct: 332 KRGEEPNNVTYNAIINGLCKEGRVDDALGILETMAKKGKKPDVVTYSTLVKGLCGVGKID 391

Query: 386 YAQKLFDEM--KLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNC 443
            A  L + +  K ++++PD+  +N++I  LCK   ++ A ++++ +    F   I  +N 
Sbjct: 392 EAVDLLNLLMSKEFHIKPDVFAFNLVIQELCKQRRLRHAKRVYYTMVERGFPSNIVTYNI 451

Query: 444 LIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNG 503
           LIDG   AG+L  A EL+      G+ P   TY+++I+GLC+   L  A         +G
Sbjct: 452 LIDGYLSAGKLTKALELWKDAVDSGISPNAATYTVLINGLCKMQMLSIAKGLFNKKRASG 511

Query: 504 CAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
             P V  +NTLM    + +   +   L  +M     +  PD  +F+I++D
Sbjct: 512 TRPTVSEYNTLMASLCRESSVEQARNLFQEMRNANHD--PDVVSFNIIID 559



 Score =  235 bits (599), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 163/595 (27%), Positives = 280/595 (47%), Gaps = 96/595 (16%)

Query: 75  ISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIK 134
           + +FNLL     ++      +  +  +    L+PD ++ N +IN       GLC   R+ 
Sbjct: 129 VYNFNLLLKGFCQSGDSHKAMDLFCMMKRNCLIPDCVSYNTVIN-------GLCKGKRLV 181

Query: 135 EATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIF 194
           EA  LFK M     +P+ +T+  LI+GFC+ G++     L ++M     E       ++F
Sbjct: 182 EAKELFKEMKGGECKPNSVTFSALIDGFCKNGDVEEGFGLLEEMEKMGLEG------DVF 235

Query: 195 SYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF--- 251
            YS +I   C +G +++ KELF EM  + + P VV  + L++  C    W+E   +    
Sbjct: 236 VYSALISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQMLDTM 295

Query: 252 ----------------------------IEMLDL----GPRPNLLTFNVMIDCLCKGGKI 279
                                       I++LDL    G  PN +T+N +I+ LCK G++
Sbjct: 296 TGCKVRPDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGEEPNNVTYNAIINGLCKEGRV 355

Query: 280 NEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTA---------------------- 317
           ++A G+LE M ++G  PD  TY++L+ G C VG+ID A                      
Sbjct: 356 DDALGILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLLNLLMSKEFHIKPDVFAFN 415

Query: 318 ---------------REIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISN 362
                          + ++ +M  +G    +V+YNILI+GY     + +A+ L++  + +
Sbjct: 416 LVIQELCKQRRLRHAKRVYYTMVERGFPSNIVTYNILIDGYLSAGKLTKALELWKDAVDS 475

Query: 363 GVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEA 422
           G+     TY  L++GL +      A+ LF++ +     P +S YN L+  LC+ + V++A
Sbjct: 476 GISPNAATYTVLINGLCKMQMLSIAKGLFNKKRASGTRPTVSEYNTLMASLCRESSVEQA 535

Query: 423 VKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHG 482
             LF  +     +  +  FN +IDG  KAG +++A EL  ++    LVP  +T+SI+I+ 
Sbjct: 536 RNLFQEMRNANHDPDVVSFNIIIDGTLKAGDVESAKELLLEMLNMNLVPDNITFSILINR 595

Query: 483 LCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLV 542
             + G+L++A      M   G  P+ V F++L+ G+    KT KVV +L +MA  ++++V
Sbjct: 596 FLKLGQLDEAASLYERMVSCGHVPDAVLFDSLLKGYSLKGKTEKVVSMLQQMA--DKDVV 653

Query: 543 PDDTTFSIVVDLLAKDEKYHECSAVSKSSYRACLYVTIFQPSSLGSMIGCTVRLM 597
            D    S ++  L           +SK      +     Q +S+G+ I C   LM
Sbjct: 654 LDSKLTSTILACLCN---------MSKDVDIEKILPKFSQHTSVGASIKCNELLM 699



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 114/386 (29%), Positives = 196/386 (50%), Gaps = 3/386 (0%)

Query: 182 DYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCA 241
           DY N + S +   S + +ID+L K    D    +  +M    + P     + LI  F   
Sbjct: 51  DYPNSIPSYS---SCNTLIDNLRKAKHYDHVISVHSKMASVSVFPCFTSLSALIESFVNT 107

Query: 242 GNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTY 301
                  G+   ++  G   N+  FN+++   C+ G  ++A  L  +M +  L PD  +Y
Sbjct: 108 QKPSFAFGVLGLIMKRGFHLNVYNFNLLLKGFCQSGDSHKAMDLFCMMKRNCLIPDCVSY 167

Query: 302 NSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIIS 361
           N++++G C   R+  A+E+F  M    CK   V+++ LI+G+CK  +VEE   L  ++  
Sbjct: 168 NTVINGLCKGKRLVEAKELFKEMKGGECKPNSVTFSALIDGFCKNGDVEEGFGLLEEMEK 227

Query: 362 NGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQE 421
            G+   V  Y+ L+SG    G     ++LF+EM   NV P++ TY+ L++ LCK    +E
Sbjct: 228 MGLEGDVFVYSALISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNALCKKQKWKE 287

Query: 422 AVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIH 481
           A ++   +   K    +  +  L DGL K GR  +A ++   + ++G  P  VTY+ +I+
Sbjct: 288 AAQMLDTMTGCKVRPDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGEEPNNVTYNAIIN 347

Query: 482 GLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNL 541
           GLC++G+++ A   L  M K G  P+VVT++TL+ G     K  + V+LL+ +   E ++
Sbjct: 348 GLCKEGRVDDALGILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLLNLLMSKEFHI 407

Query: 542 VPDDTTFSIVVDLLAKDEKYHECSAV 567
            PD   F++V+  L K  +      V
Sbjct: 408 KPDVFAFNLVIQELCKQRRLRHAKRV 433


>gi|302799689|ref|XP_002981603.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
 gi|300150769|gb|EFJ17418.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
          Length = 609

 Score =  248 bits (633), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 160/561 (28%), Positives = 277/561 (49%), Gaps = 27/561 (4%)

Query: 18  KVKLSS----LFKSPRQIAAVSSPETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSP 73
           K +L+S    + K  R   +V+      +  ++  CK G ++          +T    +P
Sbjct: 21  KARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMD-RACEILREMVTRDGMAP 79

Query: 74  PISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRI 133
            + ++  +   + ++   D      R++   G+ PD  T + LI        G C   ++
Sbjct: 80  DVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALIT-------GWCNARKV 132

Query: 134 KEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNI 193
            EA  L+K ++    R D ++   LI G CR   +  A  L ++M     E+G   K ++
Sbjct: 133 DEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEM--REDGAW-KPDV 189

Query: 194 FSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIE 253
            +Y+ +ID  CK G ++KA ++   M+GR   P VV  ++L+HG C AG+ ++   LF  
Sbjct: 190 VTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRR 249

Query: 254 MLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGR 313
           M   G  PN++T+  +I  LC   K++ A  L++ M       D  +YN+L+DGYC +GR
Sbjct: 250 MTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNALLDGYCRLGR 309

Query: 314 IDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQI-ISNGVRQTVITYN 372
           I+ A+++F  M +K C    ++Y  L+ G+C    +EEA  L   +  + G+   V+TY+
Sbjct: 310 IEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYS 369

Query: 373 TLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMN 432
            +++G  +A +   A +   EM   NV P+  TY+ LIDGLCK   V  A+++      N
Sbjct: 370 IVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVNHAMEVLK----N 425

Query: 433 KFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKA 492
             +  +  +  +I+GLC   R + A  L  ++  K + P+V T++ +I  LCR G +++A
Sbjct: 426 VDKPDVVTYTIVIEGLCGTDRTEEALTLLEEMVNKRVEPSVGTFNSVIGALCRLGDMDEA 485

Query: 493 NDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPER------NLVPDDT 546
              L+ M  +G  P +VT+ TL+ GF +  +     EL   M    +      NLVP+  
Sbjct: 486 WKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRRKAKKSSSAANLVPEQ- 544

Query: 547 TFSIVVDLLAKDEKYHECSAV 567
            FS ++  L K  +  +  AV
Sbjct: 545 AFSALIRGLCKAREIDKAMAV 565



 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 148/511 (28%), Positives = 246/511 (48%), Gaps = 65/511 (12%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
           P   +F+ L       R  D  +  Y+++++     D ++ + LI        GLC E R
Sbjct: 114 PDKFTFSALITGWCNARKVDEALKLYKEILTSSCRLDAVSSSALIT-------GLCRERR 166

Query: 133 IKEATWLFKNMIAF---GVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLIS 189
           I EA  LF+ M        +PDV+TY  LI+GFC++GNL  A+++   M       G   
Sbjct: 167 IGEAYELFQEMEMREDGAWKPDVVTYTALIDGFCKSGNLEKAMKMLGVM------EGRKC 220

Query: 190 KTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNG 249
             N+ +YS ++  LCK G +D+A +LF  M  +G  P VV  TTLIHG C A   +    
Sbjct: 221 VPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARL 280

Query: 250 LFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYC 309
           L  EM       + +++N ++D  C+ G+I EA  L + M  +   PDR TY  L+ G+C
Sbjct: 281 LMDEMTATCCPADTVSYNALLDGYCRLGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFC 340

Query: 310 LVGRIDTAREIFLSMHSK-GCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTV 368
              R++ AR +  +M +  G    VV+Y+I++ GY +     EA    +++I+  V    
Sbjct: 341 NASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNA 400

Query: 369 ITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVE-PDLSTYNILIDGLCKNNCVQEAVKLFH 427
           +TY++L+ GL +AG+  +A ++     L NV+ PD+ TY I+I+GLC  +  +EA+ L  
Sbjct: 401 VTYSSLIDGLCKAGRVNHAMEV-----LKNVDKPDVVTYTIVIEGLCGTDRTEEALTLLE 455

Query: 428 MLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTY----------- 476
            +   + E  +  FN +I  LC+ G +D AW+L   +   GL P +VTY           
Sbjct: 456 EMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTG 515

Query: 477 -------------------------------SIMIHGLCRKGKLEKANDFLLYMEKNGCA 505
                                          S +I GLC+  +++KA   +  +    C 
Sbjct: 516 RMEIAYELFEVMRRKAKKSSSAANLVPEQAFSALIRGLCKAREIDKAMAVVEELRSRECE 575

Query: 506 PNVVTFNTLMHGFLQNNKTSKVVELLHKMAE 536
           P       ++ G L+  +T +  +L++ +++
Sbjct: 576 PAEEDCLAIVDGLLRAGRTEEAGKLINSISK 606



 Score =  208 bits (530), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 132/456 (28%), Positives = 220/456 (48%), Gaps = 51/456 (11%)

Query: 148 VRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEG 207
           V P+  TY  ++NG C+    S A  + K+M      +G     ++ +YS +I+  CK+G
Sbjct: 5   VAPNERTYNVVVNGLCKARLTSKAYEVLKEM-----RDGKSVAPDLVTYSTVINGFCKQG 59

Query: 208 LVDKAKELFLEMKGR-GINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTF 266
            +D+A E+  EM  R G+ P VV  T+++ G C  G  +    +  EM   G  P+  TF
Sbjct: 60  EMDRACEILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTF 119

Query: 267 NVMIDCLCKGGKINEA-----------------------NGL---------------LEL 288
           + +I   C   K++EA                        GL               +E+
Sbjct: 120 SALITGWCNARKVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEM 179

Query: 289 MIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILN 348
                  PD  TY +L+DG+C  G ++ A ++   M  + C   VV+Y+ L++G CK  +
Sbjct: 180 REDGAWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGD 239

Query: 349 VEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNI 408
           +++A+ L+R++ S G    V+TY TL+ GL  A +   A+ L DEM       D  +YN 
Sbjct: 240 LDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNA 299

Query: 409 LIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLP-QK 467
           L+DG C+   ++EA +LF  +           + CL+ G C A RL+ A  L   +    
Sbjct: 300 LLDGYCRLGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAA 359

Query: 468 GLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKV 527
           G+ P VVTYSI++ G  R  +  +A +F+  M     APN VT+++L+ G  +  + +  
Sbjct: 360 GIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVNHA 419

Query: 528 VELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
           +E+L  + +      PD  T++IV++ L   ++  E
Sbjct: 420 MEVLKNVDK------PDVVTYTIVIEGLCGTDRTEE 449



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 117/430 (27%), Positives = 214/430 (49%), Gaps = 29/430 (6%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CKSG  NL +A    G M   +  P + +++ L   + K    D  +  +R++ S G +P
Sbjct: 200 CKSG--NLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVP 257

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           + +T   LI+       GLC  +++  A  L   M A     D ++Y  L++G+CR G +
Sbjct: 258 NVVTYTTLIH-------GLCAAHKVDAARLLMDEMTATCCPADTVSYNALLDGYCRLGRI 310

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMK-GRGINPA 227
             A +L K+M +           +  +Y+ ++   C    +++A+ L   MK   GI+P 
Sbjct: 311 EEAKQLFKEMAAKS------CLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPD 364

Query: 228 VVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLE 287
           VV  + ++ G+  A  + E      EM+     PN +T++ +ID LCK G++N A  +L+
Sbjct: 365 VVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVNHAMEVLK 424

Query: 288 LMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKIL 347
            + +    PD  TY  +++G C   R + A  +   M +K  + +V ++N +I   C++ 
Sbjct: 425 NVDK----PDVVTYTIVIEGLCGTDRTEEALTLLEEMVNKRVEPSVGTFNSVIGALCRLG 480

Query: 348 NVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMK--------LYNV 399
           +++EA  L   + ++G+   ++TY TLL G  + G+   A +LF+ M+          N+
Sbjct: 481 DMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRRKAKKSSSAANL 540

Query: 400 EPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWE 459
            P+   ++ LI GLCK   + +A+ +   L   + E   E    ++DGL +AGR + A +
Sbjct: 541 VPE-QAFSALIRGLCKAREIDKAMAVVEELRSRECEPAEEDCLAIVDGLLRAGRTEEAGK 599

Query: 460 LFHKLPQKGL 469
           L + + + GL
Sbjct: 600 LINSISKVGL 609


>gi|449508067|ref|XP_004163208.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 830

 Score =  248 bits (633), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 152/494 (30%), Positives = 249/494 (50%), Gaps = 23/494 (4%)

Query: 59  ARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILIN 118
           ++Y FGY         + SF  L   + K    D     Y K+++ G+ P  LT N +IN
Sbjct: 159 SKYDFGYT--------LCSFTTLLIQLGKFDMVDLARDMYIKMLNSGIRPSLLTFNTMIN 210

Query: 119 CFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKM 178
                   LC + R++EA  +  ++  +   P+  TY +LI G CR  NL +A  +  +M
Sbjct: 211 I-------LCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRM 263

Query: 179 VSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGF 238
           V    +       N  +YS +I+ LC EG +++A ++  EM  +GI P V   T  +   
Sbjct: 264 VKDGCD------PNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSL 317

Query: 239 CCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDR 298
           C AG   E   L  +M   G  PN+ TF  +I  L + GK   A GL   M+  GL P  
Sbjct: 318 CDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTT 377

Query: 299 FTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQ 358
            TYN+L++  C+ GR +TA  IF  M S G   +  +YN +I  +C + ++++AM ++ +
Sbjct: 378 VTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDK 437

Query: 359 IISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNC 418
           ++  G    VITYNTL+ G  + G    A +L + MK   ++PD  TY  LI G  +   
Sbjct: 438 MLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGK 497

Query: 419 VQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSI 478
           ++ A  LF+ +  +        +  +IDG     ++D+A  LF K+ + G +P+  TY++
Sbjct: 498 LEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNV 557

Query: 479 MIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPE 538
           MI G  +   + +A +F   M K G  PNV+T+ + + G  +N +T    ++ H+M   +
Sbjct: 558 MISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEME--K 615

Query: 539 RNLVPDDTTFSIVV 552
           RN  P+  T+S ++
Sbjct: 616 RNYFPNLYTYSSLI 629



 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 146/523 (27%), Positives = 252/523 (48%), Gaps = 52/523 (9%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CK G   + EA+    ++      P   ++  L     +N + D   + + ++V  G  P
Sbjct: 213 CKKG--RVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDP 270

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYG------------ 156
           + +T + LIN       GLC E R++EA  + + M+  G+ P V TY             
Sbjct: 271 NSVTYSTLIN-------GLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCS 323

Query: 157 -----------------------TLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNI 193
                                   LI+G  R G   +A+ L+ KM++    +GL+  T  
Sbjct: 324 SEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLA----DGLVPTT-- 377

Query: 194 FSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIE 253
            +Y+ +I+ LC EG  + A  +F  M   G  P+      +I  FC  G+ ++   +F +
Sbjct: 378 VTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDK 437

Query: 254 MLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGR 313
           ML  G  PN++T+N +I   CK G +N A  LLE+M   GL PD +TY  L+ G+   G+
Sbjct: 438 MLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGK 497

Query: 314 IDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNT 373
           ++ A  +F  M   G     V+Y  +I+GY  +  V++A++L+ +++ +G   +  TYN 
Sbjct: 498 LEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNV 557

Query: 374 LLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNK 433
           ++SG  +      A+    +M    + P++ TY   IDGLC+N     A K+FH +E   
Sbjct: 558 MISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRN 617

Query: 434 FEFGIEIFNCLIDGLCKAGRLDNA--WELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEK 491
           +   +  ++ LI GLC+ GR ++A  + L  +L   G  P V TY+ ++ GLC +G+  +
Sbjct: 618 YFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYE 677

Query: 492 ANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKM 534
           A+  ++ M+K G  P+   +  L+ G  +N K    + + + M
Sbjct: 678 ADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSM 720



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 143/492 (29%), Positives = 231/492 (46%), Gaps = 50/492 (10%)

Query: 57  NEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNIL 116
           +EA    G M      P I +F  L   ++++  ++  I  Y K+++ GL+P  +T N L
Sbjct: 324 SEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNAL 383

Query: 117 INCFGNKERGLCVENR-----------------------------------IKEATWLFK 141
           IN        LCVE R                                   I++A  +F 
Sbjct: 384 IN-------QLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFD 436

Query: 142 NMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIID 201
            M+  G  P+VITY TLI G+C+ GNL+ A+RL + M      NGL  K + ++Y+ +I 
Sbjct: 437 KMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKG----NGL--KPDAWTYTELIS 490

Query: 202 SLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRP 261
              + G ++ A  LF  M   GI+P  V  T +I G+      ++   LF +M++ G  P
Sbjct: 491 GFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLP 550

Query: 262 NLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIF 321
           +  T+NVMI    K   I+EA      M+++GL P+  TY S +DG C  GR   A +IF
Sbjct: 551 SSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIF 610

Query: 322 LSMHSKGCKHTVVSYNILINGYCKILNVEEA--MSLYRQIISNGVRQTVITYNTLLSGLF 379
             M  +     + +Y+ LI G C+    E+A   +L  ++   G    V TY TL+ GL 
Sbjct: 611 HEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLC 670

Query: 380 QAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIE 439
             G+   A +L   M+   ++P    Y  L+ G CKN  V+ A+ +F+ ++   F+  + 
Sbjct: 671 GEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLS 730

Query: 440 IFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYM 499
            +  LI  LCK   ++ A  +F  + +K      V +++++ GL ++G+ +     L  M
Sbjct: 731 DYKALICALCKENFIEEAQCIFQTMLEKHWNSDEVAWTVLLDGLLKEGETDLCLKLLHVM 790

Query: 500 EKNGCAPNVVTF 511
           E   C  N  T+
Sbjct: 791 ESRNCTLNFQTY 802



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 120/422 (28%), Positives = 212/422 (50%), Gaps = 8/422 (1%)

Query: 139 LFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSI 198
           ++  M+  G+RP ++T+ T+IN  C+ G +  A  +   +   D      +  N F+Y+ 
Sbjct: 189 MYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYD------AYPNAFTYTS 242

Query: 199 IIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLG 258
           +I   C+   +D A  +F  M   G +P  V  +TLI+G C  G  EE   +  EM+  G
Sbjct: 243 LILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKG 302

Query: 259 PRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAR 318
             P + T+ + +  LC  G  +EA  LL  M +RG  P+  T+ +L+ G    G+ + A 
Sbjct: 303 IEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAI 362

Query: 319 EIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGL 378
            ++  M + G   T V+YN LIN  C     E A ++++ ++S+G   +  TYN ++   
Sbjct: 363 GLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCF 422

Query: 379 FQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGI 438
              G    A  +FD+M      P++ TYN LI G CK   +  A++L  +++ N  +   
Sbjct: 423 CLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDA 482

Query: 439 EIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLY 498
             +  LI G  + G+L++A  LF+ + + G+ P  VTY+ +I G     K++ A      
Sbjct: 483 WTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWK 542

Query: 499 MEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKD 558
           M ++G  P+  T+N ++ GF + N  S+      KM   ++ L+P+  T++  +D L ++
Sbjct: 543 MVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMV--KQGLLPNVITYTSFIDGLCRN 600

Query: 559 EK 560
            +
Sbjct: 601 GR 602



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 109/374 (29%), Positives = 185/374 (49%), Gaps = 2/374 (0%)

Query: 190 KTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNG 249
           + ++ +++ +I+ LCK+G V +AK +   +      P     T+LI G C   N +    
Sbjct: 199 RPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFA 258

Query: 250 LFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYC 309
           +F  M+  G  PN +T++ +I+ LC  G++ EA  +LE M+Q+G+ P  +TY   +   C
Sbjct: 259 MFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLC 318

Query: 310 LVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVI 369
             G    A E+   M  +GC   + ++  LI+G  +    E A+ LY +++++G+  T +
Sbjct: 319 DAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTV 378

Query: 370 TYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHML 429
           TYN L++ L   G+   A  +F  M  +   P   TYN +I   C    +Q+A+ +F  +
Sbjct: 379 TYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKM 438

Query: 430 EMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKL 489
                   +  +N LI G CK G L+NA  L   +   GL P   TY+ +I G  R GKL
Sbjct: 439 LKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKL 498

Query: 490 EKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFS 549
           E A      M ++G +PN VT+  ++ G+    K    + L  KM E     +P   T++
Sbjct: 499 EHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGN--LPSSQTYN 556

Query: 550 IVVDLLAKDEKYHE 563
           +++   +K     E
Sbjct: 557 VMISGFSKTNSISE 570



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 120/396 (30%), Positives = 192/396 (48%), Gaps = 46/396 (11%)

Query: 198 IIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVC--TTLIHGFCCAGNWEEVN---GLFI 252
           ++I S   EG V +  +   E+  +  +    +C  TTL+      G ++ V+    ++I
Sbjct: 136 LMIKSCRNEGEVKRVTQFLSEINSK-YDFGYTLCSFTTLLIQL---GKFDMVDLARDMYI 191

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
           +ML+ G RP+LLTFN MI+ LCK G++ EA  ++  + +    P+ FTY SL+ G+C   
Sbjct: 192 KMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNH 251

Query: 313 RIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYN 372
            +D A  +F  M   GC    V+Y+ LING C    +EEAM +  +++  G+  TV TY 
Sbjct: 252 NLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYT 311

Query: 373 TLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMN 432
             L  L  AG +  A +L  +MK     P++ T+  LI GL ++   + A+ L+H +  +
Sbjct: 312 IPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLAD 371

Query: 433 KFEFGIEIFNCLIDGLCKAGRLDNA-----WELFH-KLP------------------QKG 468
                   +N LI+ LC  GR + A     W L H  LP                  QK 
Sbjct: 372 GLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKA 431

Query: 469 LV-----------PTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHG 517
           +V           P V+TY+ +I+G C++G L  A   L  M+ NG  P+  T+  L+ G
Sbjct: 432 MVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISG 491

Query: 518 FLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
           F +  K      L + M   E  + P+  T++ ++D
Sbjct: 492 FSRGGKLEHATSLFYGMM--EHGISPNHVTYTAIID 525



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 107/394 (27%), Positives = 181/394 (45%), Gaps = 18/394 (4%)

Query: 29  RQIAAVSSPET-QLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAK 87
           + + A SSP     N  ++  CK G  NLN A      M      P   ++  L    ++
Sbjct: 437 KMLKAGSSPNVITYNTLIYGYCKQG--NLNNAMRLLEIMKGNGLKPDAWTYTELISGFSR 494

Query: 88  NRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFG 147
               +   S +  ++  G+ P+ +T   +I+ + N  +       + +A  LF  M+  G
Sbjct: 495 GGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAK-------VDDALALFWKMVESG 547

Query: 148 VRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEG 207
             P   TY  +I+GF +T ++S A     KMV    + GL+   N+ +Y+  ID LC+ G
Sbjct: 548 NLPSSQTYNVMISGFSKTNSISEAENFCGKMV----KQGLLP--NVITYTSFIDGLCRNG 601

Query: 208 LVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWE--EVNGLFIEMLDLGPRPNLLT 265
               A ++F EM+ R   P +   ++LI+G C  G  E  E+  L   +   G  PN+ T
Sbjct: 602 RTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDT 661

Query: 266 FNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMH 325
           +  ++  LC  G+  EA+ L+  M ++GL P    Y +L+ G C   ++++A  IF SM 
Sbjct: 662 YTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMD 721

Query: 326 SKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAG 385
           + G +  +  Y  LI   CK   +EEA  +++ ++        + +  LL GL + G+  
Sbjct: 722 TLGFQLHLSDYKALICALCKENFIEEAQCIFQTMLEKHWNSDEVAWTVLLDGLLKEGETD 781

Query: 386 YAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCV 419
              KL   M+  N   +  TY +L   L   +C 
Sbjct: 782 LCLKLLHVMESRNCTLNFQTYVMLARELSALDCA 815



 Score =  122 bits (306), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 70/239 (29%), Positives = 131/239 (54%), Gaps = 2/239 (0%)

Query: 331 HTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKL 390
           +T+ S+  L+    K   V+ A  +Y +++++G+R +++T+NT+++ L + G+   A+ +
Sbjct: 165 YTLCSFTTLLIQLGKFDMVDLARDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLI 224

Query: 391 FDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCK 450
              +  Y+  P+  TY  LI G C+N+ +  A  +F  +  +  +     ++ LI+GLC 
Sbjct: 225 MSHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCS 284

Query: 451 AGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVT 510
            GRL+ A ++  ++ QKG+ PTV TY+I +  LC  G   +A + L  M+K GC PN+ T
Sbjct: 285 EGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQT 344

Query: 511 FNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSK 569
           F  L+ G  ++ K    + L HKM      LVP   T++ +++ L  + ++     + K
Sbjct: 345 FTALISGLSRDGKFEIAIGLYHKMLAD--GLVPTTVTYNALINQLCVEGRFETAFTIFK 401


>gi|449463386|ref|XP_004149415.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 830

 Score =  248 bits (633), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 152/494 (30%), Positives = 249/494 (50%), Gaps = 23/494 (4%)

Query: 59  ARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILIN 118
           ++Y FGY         + SF  L   + K    D     Y K+++ G+ P  LT N +IN
Sbjct: 159 SKYDFGYT--------LCSFTTLLIQLGKFDMVDLARDMYIKMLNSGIRPSLLTFNTMIN 210

Query: 119 CFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKM 178
                   LC + R++EA  +  ++  +   P+  TY +LI G CR  NL +A  +  +M
Sbjct: 211 I-------LCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRM 263

Query: 179 VSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGF 238
           V    +       N  +YS +I+ LC EG +++A ++  EM  +GI P V   T  +   
Sbjct: 264 VKDGCD------PNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSL 317

Query: 239 CCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDR 298
           C AG   E   L  +M   G  PN+ TF  +I  L + GK   A GL   M+  GL P  
Sbjct: 318 CDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTT 377

Query: 299 FTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQ 358
            TYN+L++  C+ GR +TA  IF  M S G   +  +YN +I  +C + ++++AM ++ +
Sbjct: 378 VTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDK 437

Query: 359 IISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNC 418
           ++  G    VITYNTL+ G  + G    A +L + MK   ++PD  TY  LI G  +   
Sbjct: 438 MLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGK 497

Query: 419 VQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSI 478
           ++ A  LF+ +  +        +  +IDG     ++D+A  LF K+ + G +P+  TY++
Sbjct: 498 LEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNV 557

Query: 479 MIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPE 538
           MI G  +   + +A +F   M K G  PNV+T+ + + G  +N +T    ++ H+M   +
Sbjct: 558 MISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEME--K 615

Query: 539 RNLVPDDTTFSIVV 552
           RN  P+  T+S ++
Sbjct: 616 RNYFPNLYTYSSLI 629



 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 146/523 (27%), Positives = 252/523 (48%), Gaps = 52/523 (9%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CK G   + EA+    ++      P   ++  L     +N + D   + + ++V  G  P
Sbjct: 213 CKKG--RVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDP 270

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYG------------ 156
           + +T + LIN       GLC E R++EA  + + M+  G+ P V TY             
Sbjct: 271 NSVTYSTLIN-------GLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCS 323

Query: 157 -----------------------TLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNI 193
                                   LI+G  R G   +A+ L+ KM++    +GL+  T  
Sbjct: 324 SEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLA----DGLVPTT-- 377

Query: 194 FSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIE 253
            +Y+ +I+ LC EG  + A  +F  M   G  P+      +I  FC  G+ ++   +F +
Sbjct: 378 VTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDK 437

Query: 254 MLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGR 313
           ML  G  PN++T+N +I   CK G +N A  LLE+M   GL PD +TY  L+ G+   G+
Sbjct: 438 MLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGK 497

Query: 314 IDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNT 373
           ++ A  +F  M   G     V+Y  +I+GY  +  V++A++L+ +++ +G   +  TYN 
Sbjct: 498 LEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNV 557

Query: 374 LLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNK 433
           ++SG  +      A+    +M    + P++ TY   IDGLC+N     A K+FH +E   
Sbjct: 558 MISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRN 617

Query: 434 FEFGIEIFNCLIDGLCKAGRLDNA--WELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEK 491
           +   +  ++ LI GLC+ GR ++A  + L  +L   G  P V TY+ ++ GLC +G+  +
Sbjct: 618 YFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYE 677

Query: 492 ANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKM 534
           A+  ++ M+K G  P+   +  L+ G  +N K    + + + M
Sbjct: 678 ADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSM 720



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 143/492 (29%), Positives = 231/492 (46%), Gaps = 50/492 (10%)

Query: 57  NEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNIL 116
           +EA    G M      P I +F  L   ++++  ++  I  Y K+++ GL+P  +T N L
Sbjct: 324 SEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNAL 383

Query: 117 INCFGNKERGLCVENR-----------------------------------IKEATWLFK 141
           IN        LCVE R                                   I++A  +F 
Sbjct: 384 IN-------QLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFD 436

Query: 142 NMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIID 201
            M+  G  P+VITY TLI G+C+ GNL+ A+RL + M      NGL  K + ++Y+ +I 
Sbjct: 437 KMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKG----NGL--KPDAWTYTELIS 490

Query: 202 SLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRP 261
              + G ++ A  LF  M   GI+P  V  T +I G+      ++   LF +M++ G  P
Sbjct: 491 GFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLP 550

Query: 262 NLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIF 321
           +  T+NVMI    K   I+EA      M+++GL P+  TY S +DG C  GR   A +IF
Sbjct: 551 SSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIF 610

Query: 322 LSMHSKGCKHTVVSYNILINGYCKILNVEEA--MSLYRQIISNGVRQTVITYNTLLSGLF 379
             M  +     + +Y+ LI G C+    E+A   +L  ++   G    V TY TL+ GL 
Sbjct: 611 HEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLC 670

Query: 380 QAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIE 439
             G+   A +L   M+   ++P    Y  L+ G CKN  V+ A+ +F+ ++   F+  + 
Sbjct: 671 GEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLS 730

Query: 440 IFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYM 499
            +  LI  LCK   ++ A  +F  + +K      V +++++ GL ++G+ +     L  M
Sbjct: 731 DYKALICALCKENFIEEAQCIFQTMLEKHWNSDEVVWTVLLDGLLKEGETDLCLKLLHVM 790

Query: 500 EKNGCAPNVVTF 511
           E   C  N  T+
Sbjct: 791 ESRNCTLNFQTY 802



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 120/422 (28%), Positives = 212/422 (50%), Gaps = 8/422 (1%)

Query: 139 LFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSI 198
           ++  M+  G+RP ++T+ T+IN  C+ G +  A  +   +   D      +  N F+Y+ 
Sbjct: 189 MYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYD------AYPNAFTYTS 242

Query: 199 IIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLG 258
           +I   C+   +D A  +F  M   G +P  V  +TLI+G C  G  EE   +  EM+  G
Sbjct: 243 LILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKG 302

Query: 259 PRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAR 318
             P + T+ + +  LC  G  +EA  LL  M +RG  P+  T+ +L+ G    G+ + A 
Sbjct: 303 IEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAI 362

Query: 319 EIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGL 378
            ++  M + G   T V+YN LIN  C     E A ++++ ++S+G   +  TYN ++   
Sbjct: 363 GLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCF 422

Query: 379 FQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGI 438
              G    A  +FD+M      P++ TYN LI G CK   +  A++L  +++ N  +   
Sbjct: 423 CLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDA 482

Query: 439 EIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLY 498
             +  LI G  + G+L++A  LF+ + + G+ P  VTY+ +I G     K++ A      
Sbjct: 483 WTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWK 542

Query: 499 MEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKD 558
           M ++G  P+  T+N ++ GF + N  S+      KM   ++ L+P+  T++  +D L ++
Sbjct: 543 MVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMV--KQGLLPNVITYTSFIDGLCRN 600

Query: 559 EK 560
            +
Sbjct: 601 GR 602



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 109/374 (29%), Positives = 185/374 (49%), Gaps = 2/374 (0%)

Query: 190 KTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNG 249
           + ++ +++ +I+ LCK+G V +AK +   +      P     T+LI G C   N +    
Sbjct: 199 RPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFA 258

Query: 250 LFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYC 309
           +F  M+  G  PN +T++ +I+ LC  G++ EA  +LE M+Q+G+ P  +TY   +   C
Sbjct: 259 MFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLC 318

Query: 310 LVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVI 369
             G    A E+   M  +GC   + ++  LI+G  +    E A+ LY +++++G+  T +
Sbjct: 319 DAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTV 378

Query: 370 TYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHML 429
           TYN L++ L   G+   A  +F  M  +   P   TYN +I   C    +Q+A+ +F  +
Sbjct: 379 TYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKM 438

Query: 430 EMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKL 489
                   +  +N LI G CK G L+NA  L   +   GL P   TY+ +I G  R GKL
Sbjct: 439 LKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKL 498

Query: 490 EKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFS 549
           E A      M ++G +PN VT+  ++ G+    K    + L  KM E     +P   T++
Sbjct: 499 EHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGN--LPSSQTYN 556

Query: 550 IVVDLLAKDEKYHE 563
           +++   +K     E
Sbjct: 557 VMISGFSKTNSISE 570



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 120/396 (30%), Positives = 192/396 (48%), Gaps = 46/396 (11%)

Query: 198 IIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVC--TTLIHGFCCAGNWEEVN---GLFI 252
           ++I S   EG V +  +   E+  +  +    +C  TTL+      G ++ V+    ++I
Sbjct: 136 LMIKSCRNEGEVKRVTQFLSEINSK-YDFGYTLCSFTTLLIQL---GKFDMVDLARDMYI 191

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
           +ML+ G RP+LLTFN MI+ LCK G++ EA  ++  + +    P+ FTY SL+ G+C   
Sbjct: 192 KMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNH 251

Query: 313 RIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYN 372
            +D A  +F  M   GC    V+Y+ LING C    +EEAM +  +++  G+  TV TY 
Sbjct: 252 NLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYT 311

Query: 373 TLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMN 432
             L  L  AG +  A +L  +MK     P++ T+  LI GL ++   + A+ L+H +  +
Sbjct: 312 IPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLAD 371

Query: 433 KFEFGIEIFNCLIDGLCKAGRLDNA-----WELFH-KLP------------------QKG 468
                   +N LI+ LC  GR + A     W L H  LP                  QK 
Sbjct: 372 GLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKA 431

Query: 469 LV-----------PTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHG 517
           +V           P V+TY+ +I+G C++G L  A   L  M+ NG  P+  T+  L+ G
Sbjct: 432 MVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISG 491

Query: 518 FLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
           F +  K      L + M   E  + P+  T++ ++D
Sbjct: 492 FSRGGKLEHATSLFYGMM--EHGISPNHVTYTAIID 525



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 107/394 (27%), Positives = 181/394 (45%), Gaps = 18/394 (4%)

Query: 29  RQIAAVSSPET-QLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAK 87
           + + A SSP     N  ++  CK G  NLN A      M      P   ++  L    ++
Sbjct: 437 KMLKAGSSPNVITYNTLIYGYCKQG--NLNNAMRLLEIMKGNGLKPDAWTYTELISGFSR 494

Query: 88  NRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFG 147
               +   S +  ++  G+ P+ +T   +I+ + N  +       + +A  LF  M+  G
Sbjct: 495 GGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAK-------VDDALALFWKMVESG 547

Query: 148 VRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEG 207
             P   TY  +I+GF +T ++S A     KMV    + GL+   N+ +Y+  ID LC+ G
Sbjct: 548 NLPSSQTYNVMISGFSKTNSISEAENFCGKMV----KQGLLP--NVITYTSFIDGLCRNG 601

Query: 208 LVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWE--EVNGLFIEMLDLGPRPNLLT 265
               A ++F EM+ R   P +   ++LI+G C  G  E  E+  L   +   G  PN+ T
Sbjct: 602 RTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDT 661

Query: 266 FNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMH 325
           +  ++  LC  G+  EA+ L+  M ++GL P    Y +L+ G C   ++++A  IF SM 
Sbjct: 662 YTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMD 721

Query: 326 SKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAG 385
           + G +  +  Y  LI   CK   +EEA  +++ ++        + +  LL GL + G+  
Sbjct: 722 TLGFQLHLSDYKALICALCKENFIEEAQCIFQTMLEKHWNSDEVVWTVLLDGLLKEGETD 781

Query: 386 YAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCV 419
              KL   M+  N   +  TY +L   L   +C 
Sbjct: 782 LCLKLLHVMESRNCTLNFQTYVMLARELSALDCA 815



 Score =  122 bits (306), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 70/239 (29%), Positives = 131/239 (54%), Gaps = 2/239 (0%)

Query: 331 HTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKL 390
           +T+ S+  L+    K   V+ A  +Y +++++G+R +++T+NT+++ L + G+   A+ +
Sbjct: 165 YTLCSFTTLLIQLGKFDMVDLARDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLI 224

Query: 391 FDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCK 450
              +  Y+  P+  TY  LI G C+N+ +  A  +F  +  +  +     ++ LI+GLC 
Sbjct: 225 MSHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCS 284

Query: 451 AGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVT 510
            GRL+ A ++  ++ QKG+ PTV TY+I +  LC  G   +A + L  M+K GC PN+ T
Sbjct: 285 EGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQT 344

Query: 511 FNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSK 569
           F  L+ G  ++ K    + L HKM      LVP   T++ +++ L  + ++     + K
Sbjct: 345 FTALISGLSRDGKFEIAIGLYHKMLAD--GLVPTTVTYNALINQLCVEGRFETAFTIFK 401


>gi|15221300|ref|NP_177597.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169839|sp|Q9CA58.1|PP120_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g74580
 gi|12324819|gb|AAG52381.1|AC011765_33 hypothetical protein; 77097-79388 [Arabidopsis thaliana]
 gi|332197491|gb|AEE35612.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 763

 Score =  248 bits (633), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 161/514 (31%), Positives = 254/514 (49%), Gaps = 18/514 (3%)

Query: 32  AAVSSPETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHY 91
           + VS   +  N+ L   CK G  ++ E       +      P + ++NL    + +    
Sbjct: 210 SGVSLCLSTFNKLLRVLCKKG--DVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGEL 267

Query: 92  DAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPD 151
           D  +     L+  G  PD +T N LI        GLC  ++ +EA      M+  G+ PD
Sbjct: 268 DGAVRMVGCLIEQGPKPDVITYNNLI-------YGLCKNSKFQEAEVYLGKMVNEGLEPD 320

Query: 152 VITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDK 211
             TY TLI G+C+ G + +A R+    V     NG +   + F+Y  +ID LC EG  ++
Sbjct: 321 SYTYNTLIAGYCKGGMVQLAERI----VGDAVFNGFVP--DQFTYRSLIDGLCHEGETNR 374

Query: 212 AKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMID 271
           A  LF E  G+GI P V++  TLI G    G   E   L  EM + G  P + TFN++++
Sbjct: 375 ALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVN 434

Query: 272 CLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKH 331
            LCK G +++A+GL+++MI +G  PD FT+N L+ GY    +++ A EI   M   G   
Sbjct: 435 GLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDP 494

Query: 332 TVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLF 391
            V +YN L+NG CK    E+ M  Y+ ++  G    + T+N LL  L +  +   A  L 
Sbjct: 495 DVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLL 554

Query: 392 DEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFH-MLEMNKFEFGIEIFNCLIDGLCK 450
           +EMK  +V PD  T+  LIDG CKN  +  A  LF  M E  K       +N +I    +
Sbjct: 555 EEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTE 614

Query: 451 AGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVT 510
              +  A +LF ++  + L P   TY +M+ G C+ G +     FLL M +NG  P++ T
Sbjct: 615 KLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTT 674

Query: 511 FNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPD 544
              +++     ++  +   ++H+M   ++ LVP+
Sbjct: 675 LGRVINCLCVEDRVYEAAGIIHRMV--QKGLVPE 706



 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 146/503 (29%), Positives = 241/503 (47%), Gaps = 15/503 (2%)

Query: 56  LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNI 115
           + EA   F  M      P + S+N +   +  + ++D     Y ++   G+ PD  +  I
Sbjct: 92  VQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTI 151

Query: 116 LINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLH 175
            +  F       C  +R   A  L  NM + G   +V+ Y T++ GF      +    L 
Sbjct: 152 RMKSF-------CKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELF 204

Query: 176 KKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLI 235
            KM++      L +      ++ ++  LCK+G V + ++L  ++  RG+ P +      I
Sbjct: 205 GKMLASGVSLCLST------FNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFI 258

Query: 236 HGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLN 295
            G C  G  +    +   +++ GP+P+++T+N +I  LCK  K  EA   L  M+  GL 
Sbjct: 259 QGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLE 318

Query: 296 PDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSL 355
           PD +TYN+L+ GYC  G +  A  I       G      +Y  LI+G C       A++L
Sbjct: 319 PDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALAL 378

Query: 356 YRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCK 415
           + + +  G++  VI YNTL+ GL   G    A +L +EM    + P++ T+NIL++GLCK
Sbjct: 379 FNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCK 438

Query: 416 NNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVT 475
             CV +A  L  ++    +   I  FN LI G     +++NA E+   +   G+ P V T
Sbjct: 439 MGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYT 498

Query: 476 YSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMA 535
           Y+ +++GLC+  K E   +    M + GCAPN+ TFN L+    +  K  + + LL +M 
Sbjct: 499 YNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMK 558

Query: 536 EPERNLVPDDTTFSIVVDLLAKD 558
               N  PD  TF  ++D   K+
Sbjct: 559 NKSVN--PDAVTFGTLIDGFCKN 579



 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 104/406 (25%), Positives = 186/406 (45%), Gaps = 42/406 (10%)

Query: 190 KTNIFSYSIIIDSLCKEGLVDKAKELFLEMK---GRGINPAVVVCTTLIHGFCCAGNWEE 246
           K  + +Y  +I+ L   G  +  +E+ ++M+   G  +   V V     +G    G  +E
Sbjct: 37  KHTLSTYRSVIEKLGYYGKFEAMEEVLVDMRENVGNHMLEGVYVGAMKNYGR--KGKVQE 94

Query: 247 VNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMD 306
              +F  M      P + ++N ++  L   G  ++A+ +   M  RG+ PD +++   M 
Sbjct: 95  AVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMK 154

Query: 307 GYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQ 366
            +C   R   A  +  +M S+GC+  VV+Y  ++ G+ +     E   L+ +++++GV  
Sbjct: 155 SFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSL 214

Query: 367 TVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKL- 425
            + T+N LL  L + G     +KL D++    V P+L TYN+ I GLC+   +  AV++ 
Sbjct: 215 CLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMV 274

Query: 426 -------------------FHMLEMNKFE-----------FGIE----IFNCLIDGLCKA 451
                              + + + +KF+            G+E     +N LI G CK 
Sbjct: 275 GCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKG 334

Query: 452 GRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTF 511
           G +  A  +       G VP   TY  +I GLC +G+  +A          G  PNV+ +
Sbjct: 335 GMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILY 394

Query: 512 NTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAK 557
           NTL+ G        +  +L ++M+  E+ L+P+  TF+I+V+ L K
Sbjct: 395 NTLIKGLSNQGMILEAAQLANEMS--EKGLIPEVQTFNILVNGLCK 438



 Score =  125 bits (313), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 81/273 (29%), Positives = 136/273 (49%), Gaps = 21/273 (7%)

Query: 72  SPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVEN 131
            P + ++N L   + K   ++ V+  Y+ +V  G  P+  T NIL+         LC   
Sbjct: 493 DPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILL-------ESLCRYR 545

Query: 132 RIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKT 191
           ++ EA  L + M    V PD +T+GTLI+GFC+ G+L  A  L +KM     E      +
Sbjct: 546 KLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKM-----EEAYKVSS 600

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
           +  +Y+III +  ++  V  A++LF EM  R + P       ++ GFC  GN        
Sbjct: 601 STPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFL 660

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
           +EM++ G  P+L T   +I+CLC   ++ EA G++  M+Q+GL P+       ++  C V
Sbjct: 661 LEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEA------VNTICDV 714

Query: 312 GRIDTA--REIFLSMHSKGCKHTVVSYNILING 342
            + + A  + +   +  K C  T  +Y +L +G
Sbjct: 715 DKKEVAAPKLVLEDLLKKSC-ITYYAYELLFDG 746


>gi|356548144|ref|XP_003542463.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Glycine max]
          Length = 756

 Score =  248 bits (632), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 156/464 (33%), Positives = 227/464 (48%), Gaps = 16/464 (3%)

Query: 77  SFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEA 136
           S N+L   + K    +  + F  +    G  PD +T N L+N       GLC    IK+ 
Sbjct: 271 SVNVLVNGLCKEGRIEEALRFIYE--EEGFCPDQVTFNALVN-------GLCRTGHIKQG 321

Query: 137 TWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSY 196
             +   M+  G   DV TY +LI+G C+ G +  A+ +   MVS D E       N  +Y
Sbjct: 322 LEMMDFMLEKGFELDVYTYNSLISGLCKLGEIDEAVEILHHMVSRDCE------PNTVTY 375

Query: 197 SIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLD 256
           + +I +LCKE  V+ A EL   +  +G+ P V    +LI G C   N E    LF EM +
Sbjct: 376 NTLIGTLCKENHVEAATELARVLTSKGVLPDVCTFNSLIQGLCLTSNREIAMELFEEMKE 435

Query: 257 LGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDT 316
            G  P+  T++++I+ LC   ++ EA  LL+ M   G   +   YN+L+DG C   R+  
Sbjct: 436 KGCDPDEFTYSILIESLCSERRLKEALMLLKEMELSGCARNVVVYNTLIDGLCKNNRVGD 495

Query: 317 AREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLS 376
           A +IF  M   G   + V+YN LING CK   VEEA  L  Q+I  G++    TY T+L 
Sbjct: 496 AEDIFDQMEMLGVSRSSVTYNTLINGLCKSKRVEEAAQLMDQMIMEGLKPDKFTYTTMLK 555

Query: 377 GLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEF 436
              Q G    A  +   M L   EPD+ TY  LI GLCK   V  A KL   ++M     
Sbjct: 556 YFCQQGDIKRAADIVQNMTLNGCEPDIVTYGTLIGGLCKAGRVDVASKLLRSVQMKGMVL 615

Query: 437 GIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCR-KGKLEKANDF 495
             + +N +I  LCK  R   A  LF ++ +KG  P V+TY I+  GLC   G +++A DF
Sbjct: 616 TPQAYNPVIQALCKRKRTKEAMRLFREMMEKGDPPDVITYKIVFRGLCNGGGPIQEAVDF 675

Query: 496 LLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPER 539
            + M + G  P   +F  L  G    +    +++L++ + E  R
Sbjct: 676 TVEMLEKGILPEFPSFGFLAEGLCSLSMEDTLIQLINMVMEKGR 719



 Score =  241 bits (616), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 152/491 (30%), Positives = 250/491 (50%), Gaps = 17/491 (3%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
           P    +N+    + K      V + + K+V+  + PD  T NILI       R LC  ++
Sbjct: 162 PDTRFYNVALSLLVKANKLKLVETLHSKMVADAVPPDVSTFNILI-------RALCKAHQ 214

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
           ++ A  + ++M  +G+RPD  T+ TL+ GF    ++  ALR+ + MV    E  L S   
Sbjct: 215 LRPAILMLEDMPNYGLRPDEKTFTTLMQGFIEEADVEGALRIKELMVESGCE--LTS--- 269

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
             S +++++ LCKEG +++A     E +G    P  V    L++G C  G+ ++   +  
Sbjct: 270 -VSVNVLVNGLCKEGRIEEALRFIYEEEG--FCPDQVTFNALVNGLCRTGHIKQGLEMMD 326

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
            ML+ G   ++ T+N +I  LCK G+I+EA  +L  M+ R   P+  TYN+L+   C   
Sbjct: 327 FMLEKGFELDVYTYNSLISGLCKLGEIDEAVEILHHMVSRDCEPNTVTYNTLIGTLCKEN 386

Query: 313 RIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYN 372
            ++ A E+   + SKG    V ++N LI G C   N E AM L+ ++   G      TY+
Sbjct: 387 HVEAATELARVLTSKGVLPDVCTFNSLIQGLCLTSNREIAMELFEEMKEKGCDPDEFTYS 446

Query: 373 TLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMN 432
            L+  L    +   A  L  EM+L     ++  YN LIDGLCKNN V +A  +F  +EM 
Sbjct: 447 ILIESLCSERRLKEALMLLKEMELSGCARNVVVYNTLIDGLCKNNRVGDAEDIFDQMEML 506

Query: 433 KFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKA 492
                   +N LI+GLCK+ R++ A +L  ++  +GL P   TY+ M+   C++G +++A
Sbjct: 507 GVSRSSVTYNTLINGLCKSKRVEEAAQLMDQMIMEGLKPDKFTYTTMLKYFCQQGDIKRA 566

Query: 493 NDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVV 552
            D +  M  NGC P++VT+ TL+ G  +  +     +LL  +      L P    ++ V+
Sbjct: 567 ADIVQNMTLNGCEPDIVTYGTLIGGLCKAGRVDVASKLLRSVQMKGMVLTPQ--AYNPVI 624

Query: 553 DLLAKDEKYHE 563
             L K ++  E
Sbjct: 625 QALCKRKRTKE 635



 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 146/530 (27%), Positives = 248/530 (46%), Gaps = 50/530 (9%)

Query: 76  SSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKE 135
           S F+ L   +A+   +D++++  R++ S  +  D  T  I +  +        +   I  
Sbjct: 93  SVFHELLRQLARAGSFDSMLTLLRQMHSSKIPVDESTFLIFLETYATSHH---LHAEINP 149

Query: 136 ATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFS 195
              L +    F V+PD   Y   ++   +   L +   LH KMV+           ++ +
Sbjct: 150 LFLLMER--DFAVKPDTRFYNVALSLLVKANKLKLVETLHSKMVADAV------PPDVST 201

Query: 196 YSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGF----------------- 238
           ++I+I +LCK   +  A  +  +M   G+ P     TTL+ GF                 
Sbjct: 202 FNILIRALCKAHQLRPAILMLEDMPNYGLRPDEKTFTTLMQGFIEEADVEGALRIKELMV 261

Query: 239 ------------------CCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKIN 280
                             C  G  EE      E  + G  P+ +TFN +++ LC+ G I 
Sbjct: 262 ESGCELTSVSVNVLVNGLCKEGRIEEALRFIYE--EEGFCPDQVTFNALVNGLCRTGHIK 319

Query: 281 EANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILI 340
           +   +++ M+++G   D +TYNSL+ G C +G ID A EI   M S+ C+   V+YN LI
Sbjct: 320 QGLEMMDFMLEKGFELDVYTYNSLISGLCKLGEIDEAVEILHHMVSRDCEPNTVTYNTLI 379

Query: 341 NGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVE 400
              CK  +VE A  L R + S GV   V T+N+L+ GL        A +LF+EMK    +
Sbjct: 380 GTLCKENHVEAATELARVLTSKGVLPDVCTFNSLIQGLCLTSNREIAMELFEEMKEKGCD 439

Query: 401 PDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWEL 460
           PD  TY+ILI+ LC    ++EA+ L   +E++     + ++N LIDGLCK  R+ +A ++
Sbjct: 440 PDEFTYSILIESLCSERRLKEALMLLKEMELSGCARNVVVYNTLIDGLCKNNRVGDAEDI 499

Query: 461 FHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQ 520
           F ++   G+  + VTY+ +I+GLC+  ++E+A   +  M   G  P+  T+ T++  F Q
Sbjct: 500 FDQMEMLGVSRSSVTYNTLINGLCKSKRVEEAAQLMDQMIMEGLKPDKFTYTTMLKYFCQ 559

Query: 521 NNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKS 570
                +  +++  M        PD  T+  ++  L K  +    S + +S
Sbjct: 560 QGDIKRAADIVQNMT--LNGCEPDIVTYGTLIGGLCKAGRVDVASKLLRS 607



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 131/413 (31%), Positives = 199/413 (48%), Gaps = 24/413 (5%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CK G   ++EA     +M      P   ++N L G + K  H +A     R L S G+LP
Sbjct: 348 CKLG--EIDEAVEILHHMVSRDCEPNTVTYNTLIGTLCKENHVEAATELARVLTSKGVLP 405

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           D  T N LI       +GLC+ +  + A  LF+ M   G  PD  TY  LI   C    L
Sbjct: 406 DVCTFNSLI-------QGLCLTSNREIAMELFEEMKEKGCDPDEFTYSILIESLCSERRL 458

Query: 169 SVALRLHKKM-VSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPA 227
             AL L K+M +SG          N+  Y+ +ID LCK   V  A+++F +M+  G++ +
Sbjct: 459 KEALMLLKEMELSG-------CARNVVVYNTLIDGLCKNNRVGDAEDIFDQMEMLGVSRS 511

Query: 228 VVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLE 287
            V   TLI+G C +   EE   L  +M+  G +P+  T+  M+   C+ G I  A  +++
Sbjct: 512 SVTYNTLINGLCKSKRVEEAAQLMDQMIMEGLKPDKFTYTTMLKYFCQQGDIKRAADIVQ 571

Query: 288 LMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKIL 347
            M   G  PD  TY +L+ G C  GR+D A ++  S+  KG   T  +YN +I   CK  
Sbjct: 572 NMTLNGCEPDIVTYGTLIGGLCKAGRVDVASKLLRSVQMKGMVLTPQAYNPVIQALCKRK 631

Query: 348 NVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFD---EMKLYNVEPDLS 404
             +EAM L+R+++  G    VITY  +  GL   G  G  Q+  D   EM    + P+  
Sbjct: 632 RTKEAMRLFREMMEKGDPPDVITYKIVFRGLCNGG--GPIQEAVDFTVEMLEKGILPEFP 689

Query: 405 TYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNA 457
           ++  L +GLC  +     ++L +M+ M K  F  +    +I G  K  + ++A
Sbjct: 690 SFGFLAEGLCSLSMEDTLIQLINMV-MEKGRFS-QSETSIIRGFLKIQKFNDA 740


>gi|4038037|gb|AAC97219.1| hypothetical protein [Arabidopsis thaliana]
          Length = 1107

 Score =  248 bits (632), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 152/503 (30%), Positives = 257/503 (51%), Gaps = 23/503 (4%)

Query: 37  PETQ-LNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVI 95
           P+T+  N  LH   K G    ++ + FF  M      P + ++N++   + K    +A  
Sbjct: 93  PKTRSCNGLLHRFAKLG--KTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAAR 150

Query: 96  SFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITY 155
             + ++   GL+PD +T N +I+ FG          R+ +    F+ M      PDVITY
Sbjct: 151 GLFEEMKFRGLVPDTVTYNSMIDGFGKV-------GRLDDTVCFFEEMKDMCCEPDVITY 203

Query: 156 GTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKEL 215
             LIN FC+ G L + L  +++M      NGL  K N+ SYS ++D+ CKEG++ +A + 
Sbjct: 204 NALINCFCKFGKLPIGLEFYREMKG----NGL--KPNVVSYSTLVDAFCKEGMMQQAIKF 257

Query: 216 FLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCK 275
           +++M+  G+ P     T+LI   C  GN  +   L  EML +G   N++T+  +ID LC 
Sbjct: 258 YVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCD 317

Query: 276 GGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVS 335
             ++ EA  L   M   G+ P+  +YN+L+ G+     +D A E+   +  +G K  ++ 
Sbjct: 318 AERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLL 377

Query: 336 YNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMK 395
           Y   I G C +  +E A  +  ++   G++   + Y TL+   F++G       L DEMK
Sbjct: 378 YGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMK 437

Query: 396 LYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIE----IFNCLIDGLCKA 451
             ++E  + T+ +LIDGLCKN  V +AV  F+ +  +   FG++    IF  +IDGLCK 
Sbjct: 438 ELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISND---FGLQANAAIFTAMIDGLCKD 494

Query: 452 GRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTF 511
            +++ A  LF ++ QKGLVP    Y+ ++ G  ++G + +A      M + G   +++ +
Sbjct: 495 NQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAY 554

Query: 512 NTLMHGFLQNNKTSKVVELLHKM 534
            +L+ G    N+  K    L +M
Sbjct: 555 TSLVWGLSHCNQLQKARSFLEEM 577



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 111/341 (32%), Positives = 187/341 (54%), Gaps = 4/341 (1%)

Query: 196 YSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEML 255
           +S++ID     G++++A + F +MK   + P    C  L+H F   G  ++V   F +M+
Sbjct: 67  FSVLIDL----GMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMI 122

Query: 256 DLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRID 315
             G RP + T+N+MIDC+CK G +  A GL E M  RGL PD  TYNS++DG+  VGR+D
Sbjct: 123 GAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLD 182

Query: 316 TAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLL 375
                F  M    C+  V++YN LIN +CK   +   +  YR++  NG++  V++Y+TL+
Sbjct: 183 DTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLV 242

Query: 376 SGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFE 435
               + G    A K + +M+   + P+  TY  LID  CK   + +A +L + +     E
Sbjct: 243 DAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVE 302

Query: 436 FGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDF 495
           + +  +  LIDGLC A R+  A ELF K+   G++P + +Y+ +IHG  +   +++A + 
Sbjct: 303 WNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALEL 362

Query: 496 LLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAE 536
           L  ++  G  P+++ + T + G     K      ++++M E
Sbjct: 363 LNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKE 403



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 132/457 (28%), Positives = 221/457 (48%), Gaps = 44/457 (9%)

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
           ++EA   F  M  F V P   +   L++ F + G      R  K M+      G  ++  
Sbjct: 76  LEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMI------GAGARPT 129

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
           +F+Y+I+ID +CKEG V+ A+ LF EMK RG+ P  V   ++I GF   G  ++    F 
Sbjct: 130 VFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFE 189

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
           EM D+   P+++T+N +I+C CK GK+         M   GL P+  +Y++L+D +C  G
Sbjct: 190 EMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEG 249

Query: 313 RIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYN 372
            +  A + ++ M   G      +Y  LI+  CKI N+ +A  L  +++  GV   V+TY 
Sbjct: 250 MMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYT 309

Query: 373 TLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLE-- 430
            L+ GL  A +   A++LF +M    V P+L++YN LI G  K   +  A++L + L+  
Sbjct: 310 ALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGR 369

Query: 431 ----------------------------MNKF-EFGIE----IFNCLIDGLCKAGRLDNA 457
                                       MN+  E GI+    I+  L+D   K+G     
Sbjct: 370 GIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEG 429

Query: 458 WELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKN-GCAPNVVTFNTLMH 516
             L  ++ +  +  TVVT+ ++I GLC+   + KA D+   +  + G   N   F  ++ 
Sbjct: 430 LHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMID 489

Query: 517 GFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
           G  ++N+      L  +M   ++ LVPD T ++ ++D
Sbjct: 490 GLCKDNQVEAATTLFEQMV--QKGLVPDRTAYTSLMD 524



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 86/319 (26%), Positives = 146/319 (45%), Gaps = 37/319 (11%)

Query: 261 PNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREI 320
           P    F+ +   L   G + EA      M +  + P   + N L+  +  +G+ D  +  
Sbjct: 58  PGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRF 117

Query: 321 FLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQ 380
           F  M   G + TV +YNI+I+  CK  +VE A  L+ ++   G+    +TYN+++ G  +
Sbjct: 118 FKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGK 177

Query: 381 AGQAGYAQKLFDEMKLYNVEPDLSTYNILI------------------------------ 410
            G+       F+EMK    EPD+ TYN LI                              
Sbjct: 178 VGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVS 237

Query: 411 -----DGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLP 465
                D  CK   +Q+A+K +  +           +  LID  CK G L +A+ L +++ 
Sbjct: 238 YSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEML 297

Query: 466 QKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTS 525
           Q G+   VVTY+ +I GLC   ++++A +    M+  G  PN+ ++N L+HGF++     
Sbjct: 298 QVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMD 357

Query: 526 KVVELLHKMAEPERNLVPD 544
           + +ELL+++    R + PD
Sbjct: 358 RALELLNEL--KGRGIKPD 374



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 104/385 (27%), Positives = 157/385 (40%), Gaps = 70/385 (18%)

Query: 62  FFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILI--NC 119
           F+  M      P + S++ L  A  K       I FY  +  +GL+P+  T   LI  NC
Sbjct: 222 FYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANC 281

Query: 120 ----------FGNKE----------------RGLCVENRIKEATWLFKNMIAFGVRPDVI 153
                      GN+                  GLC   R+KEA  LF  M   GV P++ 
Sbjct: 282 KIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLA 341

Query: 154 TYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAK 213
           +Y  LI+GF +  N+  AL L  ++       G   K ++  Y   I  LC    ++ AK
Sbjct: 342 SYNALIHGFVKAKNMDRALELLNEL------KGRGIKPDLLLYGTFIWGLCSLEKIEAAK 395

Query: 214 ELFLEMKGRGINPAVVVCTTLIHGFCCAGN-------WEEVNGLFIEML----------- 255
            +  EMK  GI    ++ TTL+  +  +GN        +E+  L IE+            
Sbjct: 396 VVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGL 455

Query: 256 ------------------DLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPD 297
                             D G + N   F  MID LCK  ++  A  L E M+Q+GL PD
Sbjct: 456 CKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPD 515

Query: 298 RFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYR 357
           R  Y SLMDG    G +  A  +   M   G K  +++Y  L+ G      +++A S   
Sbjct: 516 RTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLE 575

Query: 358 QIISNGVRQTVITYNTLLSGLFQAG 382
           ++I  G+    +   ++L   ++ G
Sbjct: 576 EMIGEGIHPDEVLCISVLKKHYELG 600


>gi|125587025|gb|EAZ27689.1| hypothetical protein OsJ_11637 [Oryza sativa Japonica Group]
          Length = 650

 Score =  248 bits (632), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 143/473 (30%), Positives = 252/473 (53%), Gaps = 17/473 (3%)

Query: 66  MTHMQPSPPISS----FNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFG 121
           +  +QP   I +    +N L   + +      + S Y ++ + G+ PD +T N L+    
Sbjct: 41  LNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLM---- 96

Query: 122 NKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSG 181
              + LC  ++++ A  + + M + GV PD  T+ TL+ GF   G++  ALR+  +M+  
Sbjct: 97  ---KALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARML-- 151

Query: 182 DYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCA 241
             E G  S T + + +++I+  CK G V+ A     +    G  P  +   T ++G C  
Sbjct: 152 --EMG-CSATKV-TVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQN 207

Query: 242 GNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTY 301
            +      +   M+  G  P++ T+N++++CLCK G++ EA G+L  M+ RG  PD  T+
Sbjct: 208 DHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTF 267

Query: 302 NSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIIS 361
           N+L+   C   R++ A ++   +  KG    V ++NILIN  CK+ +   A+ L+ ++ +
Sbjct: 268 NTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKN 327

Query: 362 NGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQE 421
           +G     +TYNTL+  L   G+ G A  L  +M+         TYN +IDGLCK   ++E
Sbjct: 328 SGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEE 387

Query: 422 AVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIH 481
           A ++F  +++         FN LIDGLCK  ++D+A+EL +++  +GL P  +TY+ ++ 
Sbjct: 388 AEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILT 447

Query: 482 GLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKM 534
             C++G ++KA D L  M  NG   +VVT+ TL++G  +  +T   +++L  M
Sbjct: 448 HYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGM 500



 Score =  245 bits (625), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 152/539 (28%), Positives = 256/539 (47%), Gaps = 51/539 (9%)

Query: 17  SKVKLSSLFKSPRQIAAVSSPETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPIS 76
           SK+KL     S      +       N  +   C++    +  A      M+    +P  +
Sbjct: 68  SKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAH--QVRTAVLMLEEMSSRGVAPDET 125

Query: 77  SFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEA 136
           +F  L     +    +A +    +++ +G     +T+N+LIN       G C   R+++A
Sbjct: 126 TFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLIN-------GYCKLGRVEDA 178

Query: 137 TWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSY 196
               +  IA G  PD ITY T +NG C+  ++  AL++   MV   ++       ++F+Y
Sbjct: 179 LGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHD------PDVFTY 232

Query: 197 SIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLD 256
           +I+++ LCK G +++AK +  +M  RG  P +    TLI   C     EE   L  ++  
Sbjct: 233 NIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTV 292

Query: 257 LGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDT 316
            G  P++ TFN++I+ LCK G  + A  L E M   G  PD  TYN+L+D  C +G++  
Sbjct: 293 KGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGK 352

Query: 317 AREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLS 376
           A ++   M S GC  + ++YN +I+G CK + +EEA  ++ Q+   G+ +  IT+NTL+ 
Sbjct: 353 ALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLID 412

Query: 377 GLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEF 436
           GL +  +   A +L ++M    ++P+  TYN ++   CK   +++A  +   +  N FE 
Sbjct: 413 GLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEV 472

Query: 437 GIEIFNCLIDGLCKAGR-----------------------------------LDNAWELF 461
            +  +  LI+GLCKAGR                                   + +A  LF
Sbjct: 473 DVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLF 532

Query: 462 HKLPQKGLVPTVVTYSIMIHGLCR-KGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFL 519
            ++ + G  P  +TY I+  GLCR  G +++A DF+L M   G  P   +F  L  G L
Sbjct: 533 REMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEGLL 591



 Score =  202 bits (513), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 118/407 (28%), Positives = 212/407 (52%), Gaps = 8/407 (1%)

Query: 146 FGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCK 205
           FG++ D + Y  L+N       + +   ++ +M +     G+  K ++ +++ ++ +LC+
Sbjct: 48  FGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGA----RGI--KPDVVTFNTLMKALCR 101

Query: 206 EGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLT 265
              V  A  +  EM  RG+ P     TTL+ GF   G+ E    +   ML++G     +T
Sbjct: 102 AHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVT 161

Query: 266 FNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMH 325
            NV+I+  CK G++ +A G ++  I  G  PD+ TYN+ ++G C    +  A ++   M 
Sbjct: 162 VNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMV 221

Query: 326 SKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAG 385
            +G    V +YNI++N  CK   +EEA  +  Q++  G    + T+NTL++ L    +  
Sbjct: 222 QEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLE 281

Query: 386 YAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLI 445
            A  L  ++ +  V PD+ T+NILI+ LCK      A++LF  ++ +        +N LI
Sbjct: 282 EALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLI 341

Query: 446 DGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCA 505
           D LC  G+L  A +L   +   G   + +TY+ +I GLC+K ++E+A +    M+  G +
Sbjct: 342 DNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGIS 401

Query: 506 PNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVV 552
            N +TFNTL+ G  ++ K     EL+++M      L P++ T++ ++
Sbjct: 402 RNAITFNTLIDGLCKDKKIDDAFELINQMI--SEGLQPNNITYNSIL 446



 Score =  201 bits (512), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 125/371 (33%), Positives = 194/371 (52%), Gaps = 6/371 (1%)

Query: 200 IDSLCKEGLVDKAKELFLEMKGR--GINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDL 257
           +DS   + L D A +L L       GI    VV   L++        + +  ++ EM   
Sbjct: 24  LDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGAR 83

Query: 258 GPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTA 317
           G +P+++TFN ++  LC+  ++  A  +LE M  RG+ PD  T+ +LM G+   G I+ A
Sbjct: 84  GIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAA 143

Query: 318 REIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSG 377
             +   M   GC  T V+ N+LINGYCK+  VE+A+   +Q I++G     ITYNT ++G
Sbjct: 144 LRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNG 203

Query: 378 LFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFG 437
           L Q    G+A K+ D M     +PD+ TYNI+++ LCKN  ++EA  + + +        
Sbjct: 204 LCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPD 263

Query: 438 IEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLL 497
           I  FN LI  LC   RL+ A +L  ++  KG+ P V T++I+I+ LC+ G    A     
Sbjct: 264 ITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFE 323

Query: 498 YMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDT-TFSIVVDLLA 556
            M+ +GC P+ VT+NTL+       K  K ++LL  M   E    P  T T++ ++D L 
Sbjct: 324 EMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDM---ESTGCPRSTITYNTIIDGLC 380

Query: 557 KDEKYHECSAV 567
           K  +  E   V
Sbjct: 381 KKMRIEEAEEV 391



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 107/375 (28%), Positives = 185/375 (49%), Gaps = 2/375 (0%)

Query: 190 KTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNG 249
           + +   Y+ +++ L +   +   + ++ EM  RGI P VV   TL+   C A        
Sbjct: 51  QADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVL 110

Query: 250 LFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYC 309
           +  EM   G  P+  TF  ++    + G I  A  +   M++ G +  + T N L++GYC
Sbjct: 111 MLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYC 170

Query: 310 LVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVI 369
            +GR++ A        + G +   ++YN  +NG C+  +V  A+ +   ++  G    V 
Sbjct: 171 KLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVF 230

Query: 370 TYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHML 429
           TYN +++ L + GQ   A+ + ++M      PD++T+N LI  LC  N ++EA+ L   +
Sbjct: 231 TYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQV 290

Query: 430 EMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKL 489
            +      +  FN LI+ LCK G    A  LF ++   G  P  VTY+ +I  LC  GKL
Sbjct: 291 TVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKL 350

Query: 490 EKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFS 549
            KA D L  ME  GC  + +T+NT++ G  +  +  +  E+  +M    + +  +  TF+
Sbjct: 351 GKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQM--DLQGISRNAITFN 408

Query: 550 IVVDLLAKDEKYHEC 564
            ++D L KD+K  + 
Sbjct: 409 TLIDGLCKDKKIDDA 423


>gi|115454009|ref|NP_001050605.1| Os03g0597200 [Oryza sativa Japonica Group]
 gi|28875991|gb|AAO60000.1| putative pentatricopeptide repeat protein [Oryza sativa Japonica
           Group]
 gi|108709658|gb|ABF97453.1| DEAD/DEAH box helicase family protein, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113549076|dbj|BAF12519.1| Os03g0597200 [Oryza sativa Japonica Group]
          Length = 742

 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 140/457 (30%), Positives = 246/457 (53%), Gaps = 13/457 (2%)

Query: 78  FNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEAT 137
           +N L   + +      + S Y ++ + G+ PD +T N L+       + LC  ++++ A 
Sbjct: 149 YNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLM-------KALCRAHQVRTAV 201

Query: 138 WLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYS 197
            + + M + GV PD  T+ TL+ GF   G++  ALR+  +M+    E G  S T + + +
Sbjct: 202 LMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARML----EMG-CSATKV-TVN 255

Query: 198 IIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDL 257
           ++I+  CK G V+ A     +    G  P  +   T ++G C   +      +   M+  
Sbjct: 256 VLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQE 315

Query: 258 GPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTA 317
           G  P++ T+N++++CLCK G++ EA G+L  M+ RG  PD  T+N+L+   C   R++ A
Sbjct: 316 GHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEA 375

Query: 318 REIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSG 377
            ++   +  KG    V ++NILIN  CK+ +   A+ L+ ++ ++G     +TYNTL+  
Sbjct: 376 LDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDN 435

Query: 378 LFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFG 437
           L   G+ G A  L  +M+         TYN +IDGLCK   ++EA ++F  +++      
Sbjct: 436 LCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRN 495

Query: 438 IEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLL 497
              FN LIDGLCK  ++D+A+EL +++  +GL P  +TY+ ++   C++G ++KA D L 
Sbjct: 496 AITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILE 555

Query: 498 YMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKM 534
            M  NG   +VVT+ TL++G  +  +T   +++L  M
Sbjct: 556 TMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGM 592



 Score =  245 bits (625), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 152/539 (28%), Positives = 256/539 (47%), Gaps = 51/539 (9%)

Query: 17  SKVKLSSLFKSPRQIAAVSSPETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPIS 76
           SK+KL     S      +       N  +   C++    +  A      M+    +P  +
Sbjct: 160 SKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAH--QVRTAVLMLEEMSSRGVAPDET 217

Query: 77  SFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEA 136
           +F  L     +    +A +    +++ +G     +T+N+LIN       G C   R+++A
Sbjct: 218 TFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLIN-------GYCKLGRVEDA 270

Query: 137 TWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSY 196
               +  IA G  PD ITY T +NG C+  ++  AL++   MV   ++       ++F+Y
Sbjct: 271 LGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHD------PDVFTY 324

Query: 197 SIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLD 256
           +I+++ LCK G +++AK +  +M  RG  P +    TLI   C     EE   L  ++  
Sbjct: 325 NIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTV 384

Query: 257 LGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDT 316
            G  P++ TFN++I+ LCK G  + A  L E M   G  PD  TYN+L+D  C +G++  
Sbjct: 385 KGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGK 444

Query: 317 AREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLS 376
           A ++   M S GC  + ++YN +I+G CK + +EEA  ++ Q+   G+ +  IT+NTL+ 
Sbjct: 445 ALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLID 504

Query: 377 GLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEF 436
           GL +  +   A +L ++M    ++P+  TYN ++   CK   +++A  +   +  N FE 
Sbjct: 505 GLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEV 564

Query: 437 GIEIFNCLIDGLCKAGR-----------------------------------LDNAWELF 461
            +  +  LI+GLCKAGR                                   + +A  LF
Sbjct: 565 DVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLF 624

Query: 462 HKLPQKGLVPTVVTYSIMIHGLCR-KGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFL 519
            ++ + G  P  +TY I+  GLCR  G +++A DF+L M   G  P   +F  L  G L
Sbjct: 625 REMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEGLL 683



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 137/505 (27%), Positives = 252/505 (49%), Gaps = 29/505 (5%)

Query: 66  MTHMQPSP-PISSFNLLFGAVAKNRH------YDAVISFYRKLVSIGLLPDFLTLNILIN 118
           +T ++  P P ++  +L  A+A++        Y+ +I   RKL ++G L     L   + 
Sbjct: 45  LTALREQPDPDAALRMLNAALARDDFAPGPEVYEEII---RKLGAVGALDLMKVLVAEMR 101

Query: 119 CFGNKERGLCVENRIK--EATWLFKNMIA---------FGVRPDVITYGTLINGFCRTGN 167
             G++ +   V + +   E   LF + +          FG++ D + Y  L+N       
Sbjct: 102 REGHQVKLGVVHSFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSK 161

Query: 168 LSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPA 227
           + +   ++ +M +     G+  K ++ +++ ++ +LC+   V  A  +  EM  RG+ P 
Sbjct: 162 MKLLESVYSEMGA----RGI--KPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPD 215

Query: 228 VVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLE 287
               TTL+ GF   G+ E    +   ML++G     +T NV+I+  CK G++ +A G ++
Sbjct: 216 ETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQ 275

Query: 288 LMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKIL 347
             I  G  PD+ TYN+ ++G C    +  A ++   M  +G    V +YNI++N  CK  
Sbjct: 276 QEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNG 335

Query: 348 NVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYN 407
            +EEA  +  Q++  G    + T+NTL++ L    +   A  L  ++ +  V PD+ T+N
Sbjct: 336 QLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFN 395

Query: 408 ILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQK 467
           ILI+ LCK      A++LF  ++ +        +N LID LC  G+L  A +L   +   
Sbjct: 396 ILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMEST 455

Query: 468 GLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKV 527
           G   + +TY+ +I GLC+K ++E+A +    M+  G + N +TFNTL+ G  ++ K    
Sbjct: 456 GCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDA 515

Query: 528 VELLHKMAEPERNLVPDDTTFSIVV 552
            EL+++M      L P++ T++ ++
Sbjct: 516 FELINQMI--SEGLQPNNITYNSIL 538



 Score =  202 bits (513), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 125/371 (33%), Positives = 194/371 (52%), Gaps = 6/371 (1%)

Query: 200 IDSLCKEGLVDKAKELFLEMKGR--GINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDL 257
           +DS   + L D A +L L       GI    VV   L++        + +  ++ EM   
Sbjct: 116 LDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGAR 175

Query: 258 GPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTA 317
           G +P+++TFN ++  LC+  ++  A  +LE M  RG+ PD  T+ +LM G+   G I+ A
Sbjct: 176 GIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAA 235

Query: 318 REIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSG 377
             +   M   GC  T V+ N+LINGYCK+  VE+A+   +Q I++G     ITYNT ++G
Sbjct: 236 LRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNG 295

Query: 378 LFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFG 437
           L Q    G+A K+ D M     +PD+ TYNI+++ LCKN  ++EA  + + +        
Sbjct: 296 LCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPD 355

Query: 438 IEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLL 497
           I  FN LI  LC   RL+ A +L  ++  KG+ P V T++I+I+ LC+ G    A     
Sbjct: 356 ITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFE 415

Query: 498 YMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDT-TFSIVVDLLA 556
            M+ +GC P+ VT+NTL+       K  K ++LL  M   E    P  T T++ ++D L 
Sbjct: 416 EMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDM---ESTGCPRSTITYNTIIDGLC 472

Query: 557 KDEKYHECSAV 567
           K  +  E   V
Sbjct: 473 KKMRIEEAEEV 483



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 107/375 (28%), Positives = 185/375 (49%), Gaps = 2/375 (0%)

Query: 190 KTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNG 249
           + +   Y+ +++ L +   +   + ++ EM  RGI P VV   TL+   C A        
Sbjct: 143 QADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVL 202

Query: 250 LFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYC 309
           +  EM   G  P+  TF  ++    + G I  A  +   M++ G +  + T N L++GYC
Sbjct: 203 MLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYC 262

Query: 310 LVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVI 369
            +GR++ A        + G +   ++YN  +NG C+  +V  A+ +   ++  G    V 
Sbjct: 263 KLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVF 322

Query: 370 TYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHML 429
           TYN +++ L + GQ   A+ + ++M      PD++T+N LI  LC  N ++EA+ L   +
Sbjct: 323 TYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQV 382

Query: 430 EMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKL 489
            +      +  FN LI+ LCK G    A  LF ++   G  P  VTY+ +I  LC  GKL
Sbjct: 383 TVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKL 442

Query: 490 EKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFS 549
            KA D L  ME  GC  + +T+NT++ G  +  +  +  E+  +M    + +  +  TF+
Sbjct: 443 GKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQM--DLQGISRNAITFN 500

Query: 550 IVVDLLAKDEKYHEC 564
            ++D L KD+K  + 
Sbjct: 501 TLIDGLCKDKKIDDA 515


>gi|413933767|gb|AFW68318.1| hypothetical protein ZEAMMB73_786057 [Zea mays]
          Length = 645

 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 141/461 (30%), Positives = 234/461 (50%), Gaps = 14/461 (3%)

Query: 75  ISSFNLLFGAVAKNRHYDAVISFYRKLV-SIGLLPDFLTLNILINCFGNKERGLCVENRI 133
           + + NL+  AV      D  +   R L+ S G  PD ++ N ++       RGLC+  R 
Sbjct: 181 VGNCNLVLQAVCDQGPVDEAVRLLRDLLPSFGCEPDVVSYNAVL-------RGLCMARRW 233

Query: 134 KEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNI 193
                L + M+A G  P+++T+ TLI   CR G       +H +M     E+G     ++
Sbjct: 234 GHVQDLMEEMVAAGCPPNIVTFSTLIGHLCRNGLFERVHEVHAQMA----EHG--CAPDV 287

Query: 194 FSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIE 253
             Y+ IID +CKE  ++ A+ +   M   G++P VV   TL+ G C A  WEE  GL  E
Sbjct: 288 RMYATIIDGVCKEERLEVARGILNRMPSYGLSPNVVCYNTLLKGLCSADRWEEAEGLLAE 347

Query: 254 MLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGR 313
           M D     + +TFN+++D LC+ G ++    +LE M++ G  PD  TY ++++G+C  G 
Sbjct: 348 MFDKDCPLDDVTFNILVDFLCQNGLVDRVIEVLEQMLEHGCMPDVITYTTVINGFCKEGL 407

Query: 314 IDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNT 373
           ID A  +  SM + GC+   VSY I++ G C      +A  L  Q+I  G     +T+NT
Sbjct: 408 IDEAVMLLRSMAACGCRPNTVSYTIVLKGLCSAERWVDAEELMSQMIQQGCPPNPVTFNT 467

Query: 374 LLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNK 433
           L++ L + G    A +L  +M +    PDL +Y+ +IDGL K     EA++L +++    
Sbjct: 468 LINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGNTDEALELLNVMVKKG 527

Query: 434 FEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKAN 493
                 I++ +   L   GR++   ++F  +    +    V Y+ +I  LC++G+ ++A 
Sbjct: 528 MSPNTIIYSSIASALSGEGRINKVIQMFENIQDTTVRSDAVLYNAVISSLCKRGETDRAI 587

Query: 494 DFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKM 534
           +FL YM  +GC PN  T+  L+ G        +  E+L ++
Sbjct: 588 EFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEILTEL 628



 Score =  205 bits (521), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 126/444 (28%), Positives = 214/444 (48%), Gaps = 17/444 (3%)

Query: 125 RGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRT----GNLSVALRLHKKMVS 180
           R LC   RI +A  +  +M   G  P    Y   +   CR     G + V   LH +  +
Sbjct: 119 RALCARGRIADALAVLDDMARRGCAPTPPMYHVTLEAACRASGFRGAVGVLRDLHGRGCA 178

Query: 181 GDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEM-KGRGINPAVVVCTTLIHGFC 239
            D  N           ++++ ++C +G VD+A  L  ++    G  P VV    ++ G C
Sbjct: 179 LDVGN----------CNLVLQAVCDQGPVDEAVRLLRDLLPSFGCEPDVVSYNAVLRGLC 228

Query: 240 CAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRF 299
            A  W  V  L  EM+  G  PN++TF+ +I  LC+ G     + +   M + G  PD  
Sbjct: 229 MARRWGHVQDLMEEMVAAGCPPNIVTFSTLIGHLCRNGLFERVHEVHAQMAEHGCAPDVR 288

Query: 300 TYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQI 359
            Y +++DG C   R++ AR I   M S G    VV YN L+ G C     EEA  L  ++
Sbjct: 289 MYATIIDGVCKEERLEVARGILNRMPSYGLSPNVVCYNTLLKGLCSADRWEEAEGLLAEM 348

Query: 360 ISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCV 419
                    +T+N L+  L Q G      ++ ++M  +   PD+ TY  +I+G CK   +
Sbjct: 349 FDKDCPLDDVTFNILVDFLCQNGLVDRVIEVLEQMLEHGCMPDVITYTTVINGFCKEGLI 408

Query: 420 QEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIM 479
            EAV L   +           +  ++ GLC A R  +A EL  ++ Q+G  P  VT++ +
Sbjct: 409 DEAVMLLRSMAACGCRPNTVSYTIVLKGLCSAERWVDAEELMSQMIQQGCPPNPVTFNTL 468

Query: 480 IHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPER 539
           I+ LC+KG +E+A + L  M  NGC+P++++++T++ G  +   T + +ELL+ M   ++
Sbjct: 469 INFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGNTDEALELLNVMV--KK 526

Query: 540 NLVPDDTTFSIVVDLLAKDEKYHE 563
            + P+   +S +   L+ + + ++
Sbjct: 527 GMSPNTIIYSSIASALSGEGRINK 550



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 118/439 (26%), Positives = 195/439 (44%), Gaps = 47/439 (10%)

Query: 155 YGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKE 214
           Y  ++ G+CR G L+ A RL   +             N ++Y  ++ +LC  G +  A  
Sbjct: 82  YNAMVAGYCRAGQLAAARRLAASVPVA---------PNAYTYFPLVRALCARGRIADALA 132

Query: 215 LFLEMKGRGINP--------------------AVVV---------------CTTLIHGFC 239
           +  +M  RG  P                    AV V               C  ++   C
Sbjct: 133 VLDDMARRGCAPTPPMYHVTLEAACRASGFRGAVGVLRDLHGRGCALDVGNCNLVLQAVC 192

Query: 240 CAGNWEEVNGLFIEML-DLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDR 298
             G  +E   L  ++L   G  P+++++N ++  LC   +      L+E M+  G  P+ 
Sbjct: 193 DQGPVDEAVRLLRDLLPSFGCEPDVVSYNAVLRGLCMARRWGHVQDLMEEMVAAGCPPNI 252

Query: 299 FTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQ 358
            T+++L+   C  G  +   E+   M   GC   V  Y  +I+G CK   +E A  +  +
Sbjct: 253 VTFSTLIGHLCRNGLFERVHEVHAQMAEHGCAPDVRMYATIIDGVCKEERLEVARGILNR 312

Query: 359 IISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNC 418
           + S G+   V+ YNTLL GL  A +   A+ L  EM   +   D  T+NIL+D LC+N  
Sbjct: 313 MPSYGLSPNVVCYNTLLKGLCSADRWEEAEGLLAEMFDKDCPLDDVTFNILVDFLCQNGL 372

Query: 419 VQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSI 478
           V   +++   +  +     +  +  +I+G CK G +D A  L   +   G  P  V+Y+I
Sbjct: 373 VDRVIEVLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLRSMAACGCRPNTVSYTI 432

Query: 479 MIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPE 538
           ++ GLC   +   A + +  M + GC PN VTFNTL++   +     + +ELL +M    
Sbjct: 433 VLKGLCSAERWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQML--V 490

Query: 539 RNLVPDDTTFSIVVDLLAK 557
               PD  ++S V+D L K
Sbjct: 491 NGCSPDLISYSTVIDGLGK 509



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 94/365 (25%), Positives = 170/365 (46%), Gaps = 41/365 (11%)

Query: 233 TLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQR 292
            ++ G+C AG   ++         +   PN  T+  ++  LC  G+I +A  +L+ M +R
Sbjct: 84  AMVAGYCRAG---QLAAARRLAASVPVAPNAYTYFPLVRALCARGRIADALAVLDDMARR 140

Query: 293 GLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEA 352
           G  P    Y+  ++  C       A  +   +H +GC   V + N+++   C    V+EA
Sbjct: 141 GCAPTPPMYHVTLEAACRASGFRGAVGVLRDLHGRGCALDVGNCNLVLQAVCDQGPVDEA 200

Query: 353 MSLYRQII-SNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILID 411
           + L R ++ S G    V++YN +L GL  A + G+ Q L +EM      P++ T++ LI 
Sbjct: 201 VRLLRDLLPSFGCEPDVVSYNAVLRGLCMARRWGHVQDLMEEMVAAGCPPNIVTFSTLIG 260

Query: 412 GLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVP 471
            LC+N   +   ++   +  +     + ++  +IDG+CK  RL+ A  + +++P  GL P
Sbjct: 261 HLCRNGLFERVHEVHAQMAEHGCAPDVRMYATIIDGVCKEERLEVARGILNRMPSYGLSP 320

Query: 472 TVVTYSIMIHGLCRKGKLEKAN----------------------DFLLY----------- 498
            VV Y+ ++ GLC   + E+A                       DFL             
Sbjct: 321 NVVCYNTLLKGLCSADRWEEAEGLLAEMFDKDCPLDDVTFNILVDFLCQNGLVDRVIEVL 380

Query: 499 --MEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLA 556
             M ++GC P+V+T+ T+++GF +     + V LL  MA       P+  +++IV+  L 
Sbjct: 381 EQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLRSMA--ACGCRPNTVSYTIVLKGLC 438

Query: 557 KDEKY 561
             E++
Sbjct: 439 SAERW 443



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 48/205 (23%), Positives = 80/205 (39%), Gaps = 21/205 (10%)

Query: 58  EARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILI 117
           +A      M      P   +FN L   + K    +  I   ++++  G  PD ++ + +I
Sbjct: 445 DAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVI 504

Query: 118 NCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKK 177
           +  G             EA  L   M+  G+ P+ I Y ++ +     G ++  +++   
Sbjct: 505 DGLGKA-------GNTDEALELLNVMVKKGMSPNTIIYSSIASALSGEGRINKVIQM--- 554

Query: 178 MVSGDYENGLISKTNIFS----YSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTT 233
                +EN  I  T + S    Y+ +I SLCK G  D+A E    M   G  P     T 
Sbjct: 555 -----FEN--IQDTTVRSDAVLYNAVISSLCKRGETDRAIEFLAYMVSSGCVPNESTYTI 607

Query: 234 LIHGFCCAGNWEEVNGLFIEMLDLG 258
           LI G    G  +E   +  E+   G
Sbjct: 608 LIRGLASEGFVKEAQEILTELCSKG 632


>gi|363543233|ref|NP_001241831.1| uncharacterized protein LOC100857030 [Zea mays]
 gi|224033903|gb|ACN36027.1| unknown [Zea mays]
          Length = 655

 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 142/460 (30%), Positives = 232/460 (50%), Gaps = 13/460 (2%)

Query: 75  ISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIK 134
           + + NL+  A+      D  +   R L S G  PD ++ N ++       +GLC+  R  
Sbjct: 192 VGNCNLVLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVL-------KGLCMAKRWG 244

Query: 135 EATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIF 194
               L + M+     P+++T+ TLI+  CR G       +  +MV    E+G     +I 
Sbjct: 245 CVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMV----EHG--CTPDIR 298

Query: 195 SYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEM 254
            Y+ IID +CKEG ++ A E+   M   G+ P VV   TL+ G C A  WEE   L  EM
Sbjct: 299 MYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEM 358

Query: 255 LDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRI 314
            D     + +TFN+++D  C+ G ++    LLE M++RG  PD  TY ++++G+C  G I
Sbjct: 359 FDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLERGCMPDVITYTTVINGFCKEGLI 418

Query: 315 DTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTL 374
           D A  +  SM + GCK   +SY I++ G C      +A  L  Q+I  G     IT+NTL
Sbjct: 419 DEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTL 478

Query: 375 LSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKF 434
           ++ L + G    A +L  +M +    PDL +Y+ +IDGL K     EA++L +++     
Sbjct: 479 INFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGM 538

Query: 435 EFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKAND 494
                I++ +   L + GR++   ++F  +    +    V Y+ +I  LC++G+ E+A +
Sbjct: 539 SPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIE 598

Query: 495 FLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKM 534
           FL YM  +GC PN  T+  L+ G        +  E+L ++
Sbjct: 599 FLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEMLTEL 638



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 133/506 (26%), Positives = 219/506 (43%), Gaps = 82/506 (16%)

Query: 125 RGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALR----LHKKMVS 180
           R LC   RI +A  +   M   G  P    Y  ++   CR G    A+R    LH +  +
Sbjct: 130 RALCARGRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCA 189

Query: 181 GDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCC 240
            D  N           +++++++C +G VD+A  L  ++   G  P VV    ++ G C 
Sbjct: 190 LDVGN----------CNLVLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGLCM 239

Query: 241 AGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFT 300
           A  W  V  L  EM+ +   PN++TFN +I  LC+ G     + +L  M++ G  PD   
Sbjct: 240 AKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRM 299

Query: 301 YNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQII 360
           Y +++DG C  G ++ A EI   M S G K  VV YN L+ G C     EE   L  ++ 
Sbjct: 300 YATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMF 359

Query: 361 SNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQ 420
                   +T+N L+    Q G      +L ++M      PD+ TY  +I+G CK   + 
Sbjct: 360 DKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLERGCMPDVITYTTVINGFCKEGLID 419

Query: 421 EAVKLFHML-----EMNKFEFGIEI------------------------------FNCLI 445
           EAV L   +     + N   + I +                              FN LI
Sbjct: 420 EAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLI 479

Query: 446 DGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCA 505
           + LCK G ++ A EL  ++   G  P +++YS +I GL + GK ++A + L  M   G +
Sbjct: 480 NFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMS 539

Query: 506 PNVVTFNTLMHGFLQNNKTSKVVEL----------------------LHKMAEPERNL-- 541
           PN + ++++     +  + +KV+++                      L K  E ER +  
Sbjct: 540 PNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEF 599

Query: 542 ---------VPDDTTFSIVVDLLAKD 558
                    VP+++T++I++  LA +
Sbjct: 600 LAYMVSSGCVPNESTYTILIRGLASE 625



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 104/338 (30%), Positives = 175/338 (51%), Gaps = 5/338 (1%)

Query: 233 TLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQR 292
            ++ G+C AG  E    L      +   PN  T+  ++  LC  G+I +A  +L+ M +R
Sbjct: 95  AMVAGYCRAGQLESARRLAAA---VPVPPNAYTYFPVVRALCARGRIADALAVLDEMPRR 151

Query: 293 GLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEA 352
           G  P    Y+ +++  C  G   +A  +   +H++GC   V + N+++N  C   +V+EA
Sbjct: 152 GCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDEA 211

Query: 353 MSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDG 412
           + L R + S G    V++YN +L GL  A + G  Q+L +EM      P++ T+N LI  
Sbjct: 212 LHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISY 271

Query: 413 LCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPT 472
           LC+N   +   ++   +  +     I ++  +IDG+CK G L+ A E+ +++P  GL P 
Sbjct: 272 LCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPN 331

Query: 473 VVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLH 532
           VV Y+ ++ GLC   + E+  + L  M    C  + VTFN L+  F QN    +V+ELL 
Sbjct: 332 VVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLE 391

Query: 533 KMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKS 570
           +M   ER  +PD  T++ V++   K+    E   + KS
Sbjct: 392 QML--ERGCMPDVITYTTVINGFCKEGLIDEAVMLLKS 427



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 99/403 (24%), Positives = 190/403 (47%), Gaps = 11/403 (2%)

Query: 155 YGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKE 214
           Y  ++ G+CR G L  A RL            +    N ++Y  ++ +LC  G +  A  
Sbjct: 93  YNAMVAGYCRAGQLESARRLAA---------AVPVPPNAYTYFPVVRALCARGRIADALA 143

Query: 215 LFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLC 274
           +  EM  RG  P   +   ++   C  G +     +  ++   G   ++   N++++ +C
Sbjct: 144 VLDEMPRRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAIC 203

Query: 275 KGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVV 334
             G ++EA  LL  +   G  PD  +YN+++ G C+  R    +E+   M    C   +V
Sbjct: 204 DQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIV 263

Query: 335 SYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEM 394
           ++N LI+  C+    E    +  Q++ +G    +  Y T++ G+ + G    A ++ + M
Sbjct: 264 TFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRM 323

Query: 395 KLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRL 454
             Y ++P++  YN L+ GLC     +E  +L   +           FN L+D  C+ G +
Sbjct: 324 PSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLV 383

Query: 455 DNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTL 514
           D   EL  ++ ++G +P V+TY+ +I+G C++G +++A   L  M   GC PN +++  +
Sbjct: 384 DRVIELLEQMLERGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIV 443

Query: 515 MHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAK 557
           + G     +     +L+ +M +    L P   TF+ +++ L K
Sbjct: 444 LKGLCSAERWVDAEDLMSQMIQQGCPLNP--ITFNTLINFLCK 484


>gi|224059754|ref|XP_002299984.1| predicted protein [Populus trichocarpa]
 gi|222847242|gb|EEE84789.1| predicted protein [Populus trichocarpa]
          Length = 610

 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 152/493 (30%), Positives = 253/493 (51%), Gaps = 15/493 (3%)

Query: 75  ISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIK 134
           I++ N L G + K    +     +R++V  G+  +  TLNI++N        LC + +  
Sbjct: 83  INACNSLLGGLVKIDWVELAWEVHREVVRSGIELNVYTLNIMVN-------ALCKDGKFD 135

Query: 135 EATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIF 194
           +       M   G+  D++TY TLI  +CR G L  A  +   M     + GL  K ++F
Sbjct: 136 DVKSFLSEMEGNGIYADMVTYNTLIGAYCREGLLEEAFEIMNSMA----DKGL--KPSLF 189

Query: 195 SYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEM 254
           +Y+ II+ LCK+G   +AK + +EM   G++P      TL+   C   N+ E   +F EM
Sbjct: 190 TYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEM 249

Query: 255 LDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRI 314
           L  G  P+L++F+ +I    +   +++A      M + GL PD   Y  LM GYC  G +
Sbjct: 250 LRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNM 309

Query: 315 DTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTL 374
             A +I   M  +GC   V++YN ++NG CK   + +A  L+ +++  G      T+ TL
Sbjct: 310 LEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTL 369

Query: 375 LSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKF 434
           + G  Q G    A  LF  M   N++PD+  YN LIDG CK   +++A +L+  +   K 
Sbjct: 370 IHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKI 429

Query: 435 EFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKAND 494
                 +  LI+  C  G +  A+ L+  + +KG+ PT+VT + +I G CR G   KA++
Sbjct: 430 FPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADE 489

Query: 495 FLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDL 554
           FL  M   G AP+ +++NTL++GF++ +   K    ++KM   +  L+PD  T+++V++ 
Sbjct: 490 FLGRMIAKGVAPDHISYNTLINGFVREDNMDKAFLWINKM--EKEGLLPDIITYNVVMNG 547

Query: 555 LAKDEKYHECSAV 567
             +  +  E   V
Sbjct: 548 FCRQGRMQEAELV 560



 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 140/505 (27%), Positives = 253/505 (50%), Gaps = 17/505 (3%)

Query: 41  LNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRK 100
           LN  ++  CK G    ++ + F   M        + ++N L GA  +    +        
Sbjct: 121 LNIMVNALCKDG--KFDDVKSFLSEMEGNGIYADMVTYNTLIGAYCREGLLEEAFEIMNS 178

Query: 101 LVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLIN 160
           +   GL P   T N +IN       GLC + R   A  +   M+  G+ PD  TY TL+ 
Sbjct: 179 MADKGLKPSLFTYNAIIN-------GLCKKGRYARAKGILIEMLNIGLSPDTTTYNTLLV 231

Query: 161 GFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMK 220
             CR  N S A  +  +M+      G++   ++ S+S +I    +   +D+A   F +MK
Sbjct: 232 ESCRRDNFSEAKEIFGEML----RQGVVP--DLVSFSSLIAVFSRNRHLDQALVYFRDMK 285

Query: 221 GRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKIN 280
             G+ P  V+ T L+HG+C  GN  E   +  EML+ G   +++ +N +++ LCK   + 
Sbjct: 286 KFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLT 345

Query: 281 EANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILI 340
           +A+ L + M++RG  PD +T+ +L+ G+C  G +  A  +F +M  +  K  +V+YN LI
Sbjct: 346 DADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLI 405

Query: 341 NGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVE 400
           +G+CK+  +E+A  L+  +IS  +    ITY  L++     G    A +L+D M    ++
Sbjct: 406 DGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIK 465

Query: 401 PDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWEL 460
           P L T N +I G C++    +A +    +           +N LI+G  +   +D A+  
Sbjct: 466 PTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLINGFVREDNMDKAFLW 525

Query: 461 FHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQ 520
            +K+ ++GL+P ++TY+++++G CR+G++++A   L  M + G  P+  T+  L++G + 
Sbjct: 526 INKMEKEGLLPDIITYNVVMNGFCRQGRMQEAELVLRKMIEKGINPDRSTYTALINGHVT 585

Query: 521 NNKTSKVVELLHKMAEPERNLVPDD 545
            +  ++      +M   +R   PDD
Sbjct: 586 QDNLNEAFRFHDEML--QRGFAPDD 608



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 71/291 (24%), Positives = 141/291 (48%), Gaps = 19/291 (6%)

Query: 269 MIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKG 328
           M+    +  ++++A  L+  MI+R                  V R++    +  SM    
Sbjct: 1   MVHVFVRSRRLSDAQALILRMIRRSG----------------VSRVEVVEALVSSM-CGN 43

Query: 329 CKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQ 388
           C    + +++LI  Y +   + E    +R + S G   ++   N+LL GL +      A 
Sbjct: 44  CGTNNLVFDLLIRTYVQARKLREGTEAFRILRSKGYLVSINACNSLLGGLVKIDWVELAW 103

Query: 389 KLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGL 448
           ++  E+    +E ++ T NI+++ LCK+    +       +E N     +  +N LI   
Sbjct: 104 EVHREVVRSGIELNVYTLNIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGAY 163

Query: 449 CKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNV 508
           C+ G L+ A+E+ + +  KGL P++ TY+ +I+GLC+KG+  +A   L+ M   G +P+ 
Sbjct: 164 CREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDT 223

Query: 509 VTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDE 559
            T+NTL+    + +  S+  E+  +M    + +VPD  +FS ++ + +++ 
Sbjct: 224 TTYNTLLVESCRRDNFSEAKEIFGEML--RQGVVPDLVSFSSLIAVFSRNR 272



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 76/299 (25%), Positives = 145/299 (48%), Gaps = 4/299 (1%)

Query: 262 NLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIF 321
           N L F+++I    +  K+ E      ++  +G        NSL+ G   +  ++ A E+ 
Sbjct: 47  NNLVFDLLIRTYVQARKLREGTEAFRILRSKGYLVSINACNSLLGGLVKIDWVELAWEVH 106

Query: 322 LSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQA 381
             +   G +  V + NI++N  CK    ++  S   ++  NG+   ++TYNTL+    + 
Sbjct: 107 REVVRSGIELNVYTLNIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGAYCRE 166

Query: 382 GQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVK-LFHMLEMNKFEFGIEI 440
           G    A ++ + M    ++P L TYN +I+GLCK      A   L  ML +         
Sbjct: 167 GLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIG-LSPDTTT 225

Query: 441 FNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYME 500
           +N L+   C+      A E+F ++ ++G+VP +V++S +I    R   L++A  +   M+
Sbjct: 226 YNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMK 285

Query: 501 KNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDE 559
           K G  P+ V +  LMHG+ +N    + +++  +M   E+  V D   ++ +++ L K++
Sbjct: 286 KFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEML--EQGCVLDVIAYNTILNGLCKEK 342


>gi|125544747|gb|EAY90886.1| hypothetical protein OsI_12495 [Oryza sativa Indica Group]
          Length = 742

 Score =  247 bits (630), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 140/457 (30%), Positives = 246/457 (53%), Gaps = 13/457 (2%)

Query: 78  FNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEAT 137
           +N L   + +      + S Y ++ + G+ PD +T N L+       + LC  ++++ A 
Sbjct: 149 YNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLM-------KALCRAHQVRTAV 201

Query: 138 WLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYS 197
            + + M + GV PD  T+ TL+ GF   G++  ALR+  +M+    E G  S T + + +
Sbjct: 202 IMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARML----EMG-CSATKV-TVN 255

Query: 198 IIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDL 257
           ++I+  CK G V+ A     +    G  P  +   T ++G C   +      +   M+  
Sbjct: 256 VLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQE 315

Query: 258 GPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTA 317
           G  P++ T+N++++CLCK G++ EA G+L  M+ RG  PD  T+N+L+   C   R++ A
Sbjct: 316 GHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEA 375

Query: 318 REIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSG 377
            ++   +  KG    V ++NILIN  CK+ +   A+ L+ ++ ++G     +TYNTL+  
Sbjct: 376 LDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDN 435

Query: 378 LFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFG 437
           L   G+ G A  L  +M+         TYN +IDGLCK   ++EA ++F  +++      
Sbjct: 436 LCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRN 495

Query: 438 IEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLL 497
              FN LIDGLCK  ++D+A+EL +++  +GL P  +TY+ ++   C++G ++KA D L 
Sbjct: 496 AITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILE 555

Query: 498 YMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKM 534
            M  NG   +VVT+ TL++G  +  +T   +++L  M
Sbjct: 556 TMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGM 592



 Score =  245 bits (625), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 152/539 (28%), Positives = 256/539 (47%), Gaps = 51/539 (9%)

Query: 17  SKVKLSSLFKSPRQIAAVSSPETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPIS 76
           SK+KL     S      +       N  +   C++    +  A      M+    +P  +
Sbjct: 160 SKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAH--QVRTAVIMLEEMSSRGVAPDET 217

Query: 77  SFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEA 136
           +F  L     +    +A +    +++ +G     +T+N+LIN       G C   R+++A
Sbjct: 218 TFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLIN-------GYCKLGRVEDA 270

Query: 137 TWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSY 196
               +  IA G  PD ITY T +NG C+  ++  AL++   MV   ++       ++F+Y
Sbjct: 271 LGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHD------PDVFTY 324

Query: 197 SIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLD 256
           +I+++ LCK G +++AK +  +M  RG  P +    TLI   C     EE   L  ++  
Sbjct: 325 NIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTV 384

Query: 257 LGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDT 316
            G  P++ TFN++I+ LCK G  + A  L E M   G  PD  TYN+L+D  C +G++  
Sbjct: 385 KGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGK 444

Query: 317 AREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLS 376
           A ++   M S GC  + ++YN +I+G CK + +EEA  ++ Q+   G+ +  IT+NTL+ 
Sbjct: 445 ALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLID 504

Query: 377 GLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEF 436
           GL +  +   A +L ++M    ++P+  TYN ++   CK   +++A  +   +  N FE 
Sbjct: 505 GLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEV 564

Query: 437 GIEIFNCLIDGLCKAGR-----------------------------------LDNAWELF 461
            +  +  LI+GLCKAGR                                   + +A  LF
Sbjct: 565 DVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLF 624

Query: 462 HKLPQKGLVPTVVTYSIMIHGLCR-KGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFL 519
            ++ + G  P  +TY I+  GLCR  G +++A DF+L M   G  P   +F  L  G L
Sbjct: 625 REMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEGLL 683



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 137/505 (27%), Positives = 252/505 (49%), Gaps = 29/505 (5%)

Query: 66  MTHMQPSP-PISSFNLLFGAVAKNRH------YDAVISFYRKLVSIGLLPDFLTLNILIN 118
           +T ++  P P ++  +L  A+A++        Y+ +I   RKL ++G L     L   + 
Sbjct: 45  LTALREQPDPDAALRMLNAALARDDFAPGPEVYEEII---RKLGAVGALDLMKVLVAEMR 101

Query: 119 CFGNKERGLCVENRIK--EATWLFKNMIA---------FGVRPDVITYGTLINGFCRTGN 167
             G++ +   V + +   E   LF + +          FG++ D + Y  L+N       
Sbjct: 102 REGHQVKLGVVHSFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSK 161

Query: 168 LSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPA 227
           + +   ++ +M +     G+  K ++ +++ ++ +LC+   V  A  +  EM  RG+ P 
Sbjct: 162 MKLLESVYSEMGA----RGI--KPDVVTFNTLMKALCRAHQVRTAVIMLEEMSSRGVAPD 215

Query: 228 VVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLE 287
               TTL+ GF   G+ E    +   ML++G     +T NV+I+  CK G++ +A G ++
Sbjct: 216 ETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQ 275

Query: 288 LMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKIL 347
             I  G  PD+ TYN+ ++G C    +  A ++   M  +G    V +YNI++N  CK  
Sbjct: 276 QEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNG 335

Query: 348 NVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYN 407
            +EEA  +  Q++  G    + T+NTL++ L    +   A  L  ++ +  V PD+ T+N
Sbjct: 336 QLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFN 395

Query: 408 ILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQK 467
           ILI+ LCK      A++LF  ++ +        +N LID LC  G+L  A +L   +   
Sbjct: 396 ILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMEST 455

Query: 468 GLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKV 527
           G   + +TY+ +I GLC+K ++E+A +    M+  G + N +TFNTL+ G  ++ K    
Sbjct: 456 GCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDA 515

Query: 528 VELLHKMAEPERNLVPDDTTFSIVV 552
            EL+++M      L P++ T++ ++
Sbjct: 516 FELINQMI--SEGLQPNNITYNSIL 538



 Score =  202 bits (513), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 132/400 (33%), Positives = 204/400 (51%), Gaps = 8/400 (2%)

Query: 171 ALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGR--GINPAV 228
           AL L K +V+     G   K  +      +DS   + L D A +L L       GI    
Sbjct: 89  ALDLMKVLVAEMRREGHQVKLGVVHS--FLDSYEGQQLFDDAVDLILNQLQPLFGIQADT 146

Query: 229 VVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLEL 288
           VV   L++        + +  ++ EM   G +P+++TFN ++  LC+  ++  A  +LE 
Sbjct: 147 VVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVIMLEE 206

Query: 289 MIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILN 348
           M  RG+ PD  T+ +LM G+   G I+ A  +   M   GC  T V+ N+LINGYCK+  
Sbjct: 207 MSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGR 266

Query: 349 VEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNI 408
           VE+A+   +Q I++G     ITYNT ++GL Q    G+A K+ D M     +PD+ TYNI
Sbjct: 267 VEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNI 326

Query: 409 LIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKG 468
           +++ LCKN  ++EA  + + +        I  FN LI  LC   RL+ A +L  ++  KG
Sbjct: 327 VVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKG 386

Query: 469 LVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVV 528
           + P V T++I+I+ LC+ G    A      M+ +GC P+ VT+NTL+       K  K +
Sbjct: 387 VSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKAL 446

Query: 529 ELLHKMAEPERNLVPDDT-TFSIVVDLLAKDEKYHECSAV 567
           +LL  M   E    P  T T++ ++D L K  +  E   V
Sbjct: 447 DLLKDM---ESTGCPRSTITYNTIIDGLCKKMRIEEAEEV 483



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 107/375 (28%), Positives = 185/375 (49%), Gaps = 2/375 (0%)

Query: 190 KTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNG 249
           + +   Y+ +++ L +   +   + ++ EM  RGI P VV   TL+   C A        
Sbjct: 143 QADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVI 202

Query: 250 LFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYC 309
           +  EM   G  P+  TF  ++    + G I  A  +   M++ G +  + T N L++GYC
Sbjct: 203 MLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYC 262

Query: 310 LVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVI 369
            +GR++ A        + G +   ++YN  +NG C+  +V  A+ +   ++  G    V 
Sbjct: 263 KLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVF 322

Query: 370 TYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHML 429
           TYN +++ L + GQ   A+ + ++M      PD++T+N LI  LC  N ++EA+ L   +
Sbjct: 323 TYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQV 382

Query: 430 EMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKL 489
            +      +  FN LI+ LCK G    A  LF ++   G  P  VTY+ +I  LC  GKL
Sbjct: 383 TVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKL 442

Query: 490 EKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFS 549
            KA D L  ME  GC  + +T+NT++ G  +  +  +  E+  +M    + +  +  TF+
Sbjct: 443 GKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQM--DLQGISRNAITFN 500

Query: 550 IVVDLLAKDEKYHEC 564
            ++D L KD+K  + 
Sbjct: 501 TLIDGLCKDKKIDDA 515


>gi|147840312|emb|CAN63985.1| hypothetical protein VITISV_001389 [Vitis vinifera]
          Length = 850

 Score =  247 bits (630), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 156/493 (31%), Positives = 255/493 (51%), Gaps = 15/493 (3%)

Query: 75  ISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIK 134
           I++ N L G + K    D     Y+++V  G+  +  TLNI+IN        LC   +I+
Sbjct: 323 INACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMIN-------ALCKNQKIE 375

Query: 135 EATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIF 194
                  +M   GV PDV+TY TLIN +CR G L  A  L   M SG    GL  K  +F
Sbjct: 376 NTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSM-SG---KGL--KPCVF 429

Query: 195 SYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEM 254
           +Y+ II+ LCK G   +AK +  EM   G++P       L+   C   N  +   +F EM
Sbjct: 430 TYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEM 489

Query: 255 LDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRI 314
              G  P+L++F+ +I  L K G +++A      M   GL PD   Y  L+ G+C  G +
Sbjct: 490 PSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVM 549

Query: 315 DTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTL 374
             A ++   M  +GC   VV+YN ++NG CK   + EA  L+ ++   GV     T+ TL
Sbjct: 550 SEALKVRDEMLEQGCXLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTL 609

Query: 375 LSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKF 434
           ++G  + G    A  LF+ M   N++PD+ TYN LIDG CK + +++  +L++ +   + 
Sbjct: 610 INGYXKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRI 669

Query: 435 EFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKAND 494
                 +  LI+G C  G +  A+ L+ ++ +KG   T++T + ++ G CR G   KA++
Sbjct: 670 YPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADE 729

Query: 495 FLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDL 554
           FL  M   G  P+ +T+NTL++GF++     +   L++KM      L+PD  T++++++ 
Sbjct: 730 FLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENS--GLLPDVITYNVILNG 787

Query: 555 LAKDEKYHECSAV 567
            ++  +  E   +
Sbjct: 788 FSRQGRMQEAELI 800



 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 151/501 (30%), Positives = 256/501 (51%), Gaps = 40/501 (7%)

Query: 75  ISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIK 134
           + + N++  A+ KN+  +   SF   +   G+ PD +T N LIN +       C +  ++
Sbjct: 358 VYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAY-------CRQGLLE 410

Query: 135 EATWLFKNMIAFGVRPDVITYGTLINGFCRTGN-------LSVALRLHKKMVSGDYE--- 184
           EA  L  +M   G++P V TY  +ING C+TG        L   L++     +  Y    
Sbjct: 411 EAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILL 470

Query: 185 ------NGLISKTNIF-------------SYSIIIDSLCKEGLVDKAKELFLEMKGRGIN 225
                 + ++    IF             S+S +I  L K G +D+A + F +MK  G+ 
Sbjct: 471 VECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLA 530

Query: 226 PAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGL 285
           P  V+ T LI GFC  G   E   +  EML+ G   +++T+N +++ LCK   ++EA+ L
Sbjct: 531 PDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEKMLSEADEL 590

Query: 286 LELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCK 345
              M +RG+ PD +T+ +L++GY   G ++ A  +F  M  +  K  VV+YN LI+G+CK
Sbjct: 591 FTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCK 650

Query: 346 ILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLST 405
              +E+   L+  +IS  +    I+Y  L++G    G    A +L+DEM     E  + T
Sbjct: 651 GSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIIT 710

Query: 406 YNILIDGLCK-NNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKL 464
            N ++ G C+  N V+    L +ML       GI  +N LI+G  K   +D A+ L +K+
Sbjct: 711 CNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGI-TYNTLINGFIKEENMDRAFALVNKM 769

Query: 465 PQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKT 524
              GL+P V+TY+++++G  R+G++++A   +L M + G  P+  T+ +L++G +  N  
Sbjct: 770 ENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNL 829

Query: 525 SKVVELLHKMAEPERNLVPDD 545
            +   +  +M   +R  VPDD
Sbjct: 830 KEAFRVHDEML--QRGFVPDD 848



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 143/492 (29%), Positives = 243/492 (49%), Gaps = 17/492 (3%)

Query: 17  SKVKLSSLFKSPRQIAAVSSPETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPIS 76
            K++ +  F S  +   V       N  ++  C+ G+  L EA      M+     P + 
Sbjct: 372 QKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGL--LEEAFELMDSMSGKGLKPCVF 429

Query: 77  SFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNIL-INCFGNKERGLCVENRIKE 135
           ++N +   + K   Y        +++ IG+ PD  T NIL + C        C  + + +
Sbjct: 430 TYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVEC--------CRNDNMMD 481

Query: 136 ATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFS 195
           A  +F  M + GV PD++++  LI    + G L  AL+  +     D +N  ++  N+  
Sbjct: 482 AERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFR-----DMKNAGLAPDNVI- 535

Query: 196 YSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEML 255
           Y+I+I   C+ G++ +A ++  EM  +G    VV   T+++G C      E + LF EM 
Sbjct: 536 YTILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEKMLSEADELFTEMT 595

Query: 256 DLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRID 315
           + G  P+  TF  +I+   K G +N+A  L E+MIQR L PD  TYN+L+DG+C    ++
Sbjct: 596 ERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEME 655

Query: 316 TAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLL 375
              E++  M S+      +SY ILINGYC +  V EA  L+ +++  G   T+IT NT++
Sbjct: 656 KVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIV 715

Query: 376 SGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFE 435
            G  +AG A  A +    M L  + PD  TYN LI+G  K   +  A  L + +E +   
Sbjct: 716 KGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLL 775

Query: 436 FGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDF 495
             +  +N +++G  + GR+  A  +  K+ ++G+ P   TY+ +I+G   +  L++A   
Sbjct: 776 PDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRV 835

Query: 496 LLYMEKNGCAPN 507
              M + G  P+
Sbjct: 836 HDEMLQRGFVPD 847



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 110/367 (29%), Positives = 194/367 (52%), Gaps = 2/367 (0%)

Query: 191 TNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGL 250
           +N   + +++ +  +   + +  E F  +K +G+  ++  C +L+ G    G  +    +
Sbjct: 286 SNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEI 345

Query: 251 FIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCL 310
           + E++  G + N+ T N+MI+ LCK  KI      L  M ++G+ PD  TYN+L++ YC 
Sbjct: 346 YQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCR 405

Query: 311 VGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVIT 370
            G ++ A E+  SM  KG K  V +YN +ING CK      A  +  +++  G+     T
Sbjct: 406 QGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTAT 465

Query: 371 YNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLE 430
           YN LL    +      A+++FDEM    V PDL +++ LI  L KN C+ +A+K F  ++
Sbjct: 466 YNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMK 525

Query: 431 MNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLE 490
                    I+  LI G C+ G +  A ++  ++ ++G    VVTY+ +++GLC++  L 
Sbjct: 526 NAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEKMLS 585

Query: 491 KANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSI 550
           +A++    M + G  P+  TF TL++G+ ++   +K V L   M   +RNL PD  T++ 
Sbjct: 586 EADELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMMI--QRNLKPDVVTYNT 643

Query: 551 VVDLLAK 557
           ++D   K
Sbjct: 644 LIDGFCK 650



 Score =  122 bits (305), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 77/299 (25%), Positives = 148/299 (49%), Gaps = 20/299 (6%)

Query: 260 RPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTARE 319
           + +L +F+ MI  L +  ++ +A  ++  M+++                  V R++    
Sbjct: 233 KHSLQSFSAMIHILVRSRRLPDAQAVILRMVRKSG----------------VSRVEIVES 276

Query: 320 IFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLF 379
           + L+  +  C    + +++L+  Y +   + E    +R + S G+  ++   N+LL GL 
Sbjct: 277 LVLTYGN--CGSNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLV 334

Query: 380 QAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIE 439
           + G    A +++ E+    V+ ++ T NI+I+ LCKN  ++        +E       + 
Sbjct: 335 KVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVV 394

Query: 440 IFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYM 499
            +N LI+  C+ G L+ A+EL   +  KGL P V TY+ +I+GLC+ GK  +A   L  M
Sbjct: 395 TYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEM 454

Query: 500 EKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKD 558
            K G +P+  T+N L+    +N+       +  +M  P + +VPD  +FS ++ LL+K+
Sbjct: 455 LKIGMSPDTATYNILLVECCRNDNMMDAERIFDEM--PSQGVVPDLVSFSALIGLLSKN 511


>gi|168049795|ref|XP_001777347.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162671323|gb|EDQ57877.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 621

 Score =  246 bits (629), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 158/495 (31%), Positives = 252/495 (50%), Gaps = 15/495 (3%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
           N  L+   K+G     EA+  F  +   + +P + S++ L  ++ +   ++A +    ++
Sbjct: 13  NSLLNALAKAG--QCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALEVVAEM 70

Query: 102 VSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLING 161
            + G  P+  T N L++C G          +  EA  L   M   G  PDV TY  LI+ 
Sbjct: 71  QAKGCKPNLWTYNTLVDCLGKA-------GQFDEALRLLAEMRDNGCVPDVRTYNCLIST 123

Query: 162 FCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKG 221
             + G LS A  L  +M     E G +  T  F+Y+ +I  L K G   KA EL  EM+ 
Sbjct: 124 LGKAGRLSEAFTLFAEM----RERGCVPDT--FTYNSLIYGLGKVGRSQKAMELLEEMER 177

Query: 222 RGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINE 281
            G  P V+  ++LI G    G   +   LF EM   G +P+ +TF  ++D L K G++++
Sbjct: 178 HGCPPDVMTYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDD 237

Query: 282 ANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILIN 341
           A  LL+ M +RG+ P   TYN+L+ G+  VG +  A  +   M   GCK  VV+Y+ LI 
Sbjct: 238 ALELLDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLIT 297

Query: 342 GYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEP 401
           G  K   ++EA  + +++   G     ITYNTL++GL +AG    A +LFD MK     P
Sbjct: 298 GLIKASQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNP 357

Query: 402 DLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELF 461
           D+ TY+ LI  L K   V+ A  LF  +E    +  +  +  +I  L KAG++D+A  LF
Sbjct: 358 DVVTYSTLITALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLF 417

Query: 462 HKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQN 521
            ++  KGL P V+TY+  ++ L R G+ ++A      M+++G  P+V T++ L+ G  + 
Sbjct: 418 SEMRGKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKESGLLPDVATYDALLLGLSKT 477

Query: 522 NKTSKVVELLHKMAE 536
            +      LL ++ E
Sbjct: 478 KEVDDACGLLKELIE 492



 Score =  234 bits (598), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 146/499 (29%), Positives = 257/499 (51%), Gaps = 15/499 (3%)

Query: 71  PSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVE 130
           PSP + ++N L  A+AK    +     + +L +    PD ++ + LIN  G         
Sbjct: 5   PSPNVVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRA------- 57

Query: 131 NRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISK 190
            + + A  +   M A G +P++ TY TL++   + G    ALRL  +M     +NG +  
Sbjct: 58  GKWEAALEVVAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEM----RDNGCVP- 112

Query: 191 TNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGL 250
            ++ +Y+ +I +L K G + +A  LF EM+ RG  P      +LI+G    G  ++   L
Sbjct: 113 -DVRTYNCLISTLGKAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMEL 171

Query: 251 FIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCL 310
             EM   G  P+++T++ +I  L K G+  +A  L + M +RG  PD  T+ +LMD    
Sbjct: 172 LEEMERHGCPPDVMTYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGK 231

Query: 311 VGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVIT 370
            GR+D A E+   M  +G K  VV+YN LI G+ K+ ++ EA +L  ++  NG +  V+T
Sbjct: 232 AGRVDDALELLDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVT 291

Query: 371 YNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLE 430
           Y+ L++GL +A Q   A ++  +M+     PD  TYN LI+GL K   + +A +LF  ++
Sbjct: 292 YSCLITGLIKASQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMK 351

Query: 431 MNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLE 490
                  +  ++ LI  L KA R+++A  LF ++   G+ P + TY  +I  L + G+++
Sbjct: 352 SKGCNPDVVTYSTLITALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVD 411

Query: 491 KANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSI 550
            A+     M   G +P+V+T+N  ++   +  +  +  ++   M E    L+PD  T+  
Sbjct: 412 DADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKES--GLLPDVATYDA 469

Query: 551 VVDLLAKDEKYHECSAVSK 569
           ++  L+K ++  +   + K
Sbjct: 470 LLLGLSKTKEVDDACGLLK 488



 Score =  228 bits (581), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 150/531 (28%), Positives = 250/531 (47%), Gaps = 48/531 (9%)

Query: 48  NCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLL 107
           +C       +EA      M      P + ++N L   + K        + + ++   G +
Sbjct: 87  DCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGKAGRLSEAFTLFAEMRERGCV 146

Query: 108 PDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGN 167
           PD  T N LI        GL    R ++A  L + M   G  PDV+TY +LI G  + G 
Sbjct: 147 PDTFTYNSLI-------YGLGKVGRSQKAMELLEEMERHGCPPDVMTYSSLITGLGKDGE 199

Query: 168 LSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPA 227
              A +L ++M           K +  +++ ++D+L K G VD A EL  EMK RG+ P 
Sbjct: 200 TVKAFKLFQEMKRRG------RKPDSITFTALMDALGKAGRVDDALELLDEMKERGVKPG 253

Query: 228 VVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLE 287
           VV    LI GF   G+  E   L  EM   G +P+++T++ +I  L K  +++EA  +L+
Sbjct: 254 VVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQVLK 313

Query: 288 LMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKIL 347
            M + G  PD  TYN+L++G    G ++ A  +F  M SKGC   VV+Y+ LI    K  
Sbjct: 314 KMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAA 373

Query: 348 NVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYN 407
            VE A  L+ ++ S G++  + TY ++++ L +AGQ   A +LF EM+   + PD+ TYN
Sbjct: 374 RVESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYN 433

Query: 408 ILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKA---------------- 451
             ++ L +    +EA K+F  ++ +     +  ++ L+ GL K                 
Sbjct: 434 AFLNSLGRGGRFKEARKIFEDMKESGLLPDVATYDALLLGLSKTKEVDDACGLLKELIEQ 493

Query: 452 -------------------GRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKA 492
                              G +D A EL      KGL P   +Y+ +I  L + G++ +A
Sbjct: 494 GCAFDSLKFDECLEILTSWGNVDEAHELLQFANSKGLWPGASSYNALIDALAKAGRVSEA 553

Query: 493 NDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVP 543
            + L  +++ G  P++V++++L+    Q  +     ELL +M++    L P
Sbjct: 554 FNTLEDLKEQGGKPDIVSYSSLISALGQTGQIDTAFELLEEMSKRGLKLSP 604



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 129/422 (30%), Positives = 197/422 (46%), Gaps = 13/422 (3%)

Query: 62  FFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFG 121
            F  M      P   +F  L  A+ K    D  +    ++   G+ P  +T N LI  FG
Sbjct: 206 LFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMKERGVKPGVVTYNALIAGFG 265

Query: 122 NKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSG 181
                      + EA  L   M   G +PDV+TY  LI G  +   L  A ++ KKM   
Sbjct: 266 KV-------GDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQVLKKM--- 315

Query: 182 DYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCA 241
             + G    T   +Y+ +I+ L K GL++ A  LF  MK +G NP VV  +TLI     A
Sbjct: 316 -EKEGCPPDT--ITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKA 372

Query: 242 GNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTY 301
              E    LF EM  +G +P+L T+  +I  L K G++++A+ L   M  +GL+PD  TY
Sbjct: 373 ARVESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITY 432

Query: 302 NSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIIS 361
           N+ ++     GR   AR+IF  M   G    V +Y+ L+ G  K   V++A  L +++I 
Sbjct: 433 NAFLNSLGRGGRFKEARKIFEDMKESGLLPDVATYDALLLGLSKTKEVDDACGLLKELIE 492

Query: 362 NGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQE 421
            G     + ++  L  L   G    A +L        + P  S+YN LID L K   V E
Sbjct: 493 QGCAFDSLKFDECLEILTSWGNVDEAHELLQFANSKGLWPGASSYNALIDALAKAGRVSE 552

Query: 422 AVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIH 481
           A      L+    +  I  ++ LI  L + G++D A+EL  ++ ++GL  +  +YS ++ 
Sbjct: 553 AFNTLEDLKEQGGKPDIVSYSSLISALGQTGQIDTAFELLEEMSKRGLKLSPRSYSNLVR 612

Query: 482 GL 483
            L
Sbjct: 613 KL 614



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 105/324 (32%), Positives = 170/324 (52%), Gaps = 5/324 (1%)

Query: 259 PRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAR 318
           P PN++T+N +++ L K G+  EA  L E +      PD  +Y+ L++     G+ + A 
Sbjct: 5   PSPNVVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAAL 64

Query: 319 EIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGL 378
           E+   M +KGCK  + +YN L++   K    +EA+ L  ++  NG    V TYN L+S L
Sbjct: 65  EVVAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTL 124

Query: 379 FQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGI 438
            +AG+   A  LF EM+     PD  TYN LI GL K    Q+A++L   +E +     +
Sbjct: 125 GKAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDV 184

Query: 439 EIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLY 498
             ++ LI GL K G    A++LF ++ ++G  P  +T++ ++  L + G+++ A + L  
Sbjct: 185 MTYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDE 244

Query: 499 MEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERN-LVPDDTTFSIVVDLLAK 557
           M++ G  P VVT+N L+ GF    K   +VE  + + E +RN   PD  T+S ++  L K
Sbjct: 245 MKERGVKPGVVTYNALIAGF---GKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIK 301

Query: 558 DEKYHE-CSAVSKSSYRACLYVTI 580
             +  E C  + K     C   TI
Sbjct: 302 ASQLDEACQVLKKMEKEGCPPDTI 325


>gi|356528166|ref|XP_003532676.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Glycine max]
          Length = 852

 Score =  246 bits (629), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 160/524 (30%), Positives = 259/524 (49%), Gaps = 50/524 (9%)

Query: 56  LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNI 115
           L EAR  F  M   +  P + S N L   ++K+      +SF++ +V  GL P   T N+
Sbjct: 197 LEEARQCFWKMNKFRVLPKVRSCNELLHRLSKSSKGGLALSFFKDMVVAGLSPSVFTYNM 256

Query: 116 LINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLH 175
           +I C       L  E  ++ A  LF+ M A G+RPD++TY +LI+G+ + G L+ A+ + 
Sbjct: 257 VIGC-------LAREGDLEAARSLFEEMKAKGLRPDIVTYNSLIDGYGKVGMLTGAVSVF 309

Query: 176 KKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLI 235
           ++M     E       ++ +Y+ +I+  CK   + +A E    MK RG+ P VV  +TLI
Sbjct: 310 EEMKDAGCE------PDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQPNVVTYSTLI 363

Query: 236 HGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLN 295
             FC AG   E N  F++M+ +G +PN  T+  +ID  CK G +NEA  L   M Q G+N
Sbjct: 364 DAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLESEMQQAGVN 423

Query: 296 PDRFTYNSLMDGYCLVGRIDTAREIFLS-------------------------------- 323
            +  TY +L+DG C  GR+  A E+F +                                
Sbjct: 424 LNIVTYTALLDGLCEDGRMREAEELFGALLKAGWTLNQQIYTSLFHGYIKAKMMEKAMDI 483

Query: 324 ---MHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQ 380
              M+ K  K  ++ Y   I G C+   +E++M++ R+++  G+      Y TL+   F+
Sbjct: 484 LEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREMMDCGLTANSYIYTTLIDAYFK 543

Query: 381 AGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEI 440
            G+   A  L  EM+   ++  + TY +LIDGLCK   VQ+AV+ F  +  N  +  I I
Sbjct: 544 VGKTTEAVNLLQEMQDLGIKITVVTYGVLIDGLCKIGLVQQAVRYFDHMTRNGLQPNIMI 603

Query: 441 FNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYME 500
           +  LIDGLCK   L+ A  LF+++  KG+ P  + Y+ +I G  + G   +A      M 
Sbjct: 604 YTALIDGLCKNDCLEEAKNLFNEMLDKGISPDKLVYTSLIDGNMKHGNPGEALSLRNRMV 663

Query: 501 KNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPD 544
           + G   ++  + +L+ GF +  +      LL +M    + ++PD
Sbjct: 664 EIGMELDLCAYTSLIWGFSRYGQVQLAKSLLDEML--RKGIIPD 705



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 105/341 (30%), Positives = 172/341 (50%)

Query: 196 YSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEML 255
           +  + + L   G++++A++ F +M    + P V  C  L+H    +         F +M+
Sbjct: 184 FDTLFNVLVDLGMLEEARQCFWKMNKFRVLPKVRSCNELLHRLSKSSKGGLALSFFKDMV 243

Query: 256 DLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRID 315
             G  P++ T+N++I CL + G +  A  L E M  +GL PD  TYNSL+DGY  VG + 
Sbjct: 244 VAGLSPSVFTYNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLIDGYGKVGMLT 303

Query: 316 TAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLL 375
            A  +F  M   GC+  V++YN LIN +CK   + +A      +   G++  V+TY+TL+
Sbjct: 304 GAVSVFEEMKDAGCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQPNVVTYSTLI 363

Query: 376 SGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFE 435
               +AG    A K F +M    ++P+  TY  LID  CK   + EA KL   ++     
Sbjct: 364 DAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLESEMQQAGVN 423

Query: 436 FGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDF 495
             I  +  L+DGLC+ GR+  A ELF  L + G       Y+ + HG  +   +EKA D 
Sbjct: 424 LNIVTYTALLDGLCEDGRMREAEELFGALLKAGWTLNQQIYTSLFHGYIKAKMMEKAMDI 483

Query: 496 LLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAE 536
           L  M K    P+++ + T + G  + N+    + ++ +M +
Sbjct: 484 LEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREMMD 524



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 98/347 (28%), Positives = 172/347 (49%), Gaps = 10/347 (2%)

Query: 225 NPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANG 284
            P   V  TL +     G  EE    F +M      P + + N ++  L K  K   A  
Sbjct: 178 RPGFGVFDTLFNVLVDLGMLEEARQCFWKMNKFRVLPKVRSCNELLHRLSKSSKGGLALS 237

Query: 285 LLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYC 344
             + M+  GL+P  FTYN ++      G ++ AR +F  M +KG +  +V+YN LI+GY 
Sbjct: 238 FFKDMVVAGLSPSVFTYNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLIDGYG 297

Query: 345 KILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLS 404
           K+  +  A+S++ ++   G    VITYN+L++   +  +   A +    MK   ++P++ 
Sbjct: 298 KVGMLTGAVSVFEEMKDAGCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQPNVV 357

Query: 405 TYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIE----IFNCLIDGLCKAGRLDNAWEL 460
           TY+ LID  CK   + EA K F    ++    G++     +  LID  CK G L+ A++L
Sbjct: 358 TYSTLIDAFCKAGMLLEANKFF----VDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKL 413

Query: 461 FHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQ 520
             ++ Q G+   +VTY+ ++ GLC  G++ +A +    + K G   N   + +L HG+++
Sbjct: 414 ESEMQQAGVNLNIVTYTALLDGLCEDGRMREAEELFGALLKAGWTLNQQIYTSLFHGYIK 473

Query: 521 NNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAV 567
                K +++L +M   ++NL PD   +   +  L +  +  +  AV
Sbjct: 474 AKMMEKAMDILEEMN--KKNLKPDLLLYGTKIWGLCRQNEIEDSMAV 518



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 102/368 (27%), Positives = 167/368 (45%), Gaps = 22/368 (5%)

Query: 25  FKSPRQIAAVSSPETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGA 84
            +S  Q A V+         L   C+ G   + EA   FG +     +     +  LF  
Sbjct: 413 LESEMQQAGVNLNIVTYTALLDGLCEDG--RMREAEELFGALLKAGWTLNQQIYTSLFHG 470

Query: 85  VAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMI 144
             K +  +  +    ++    L PD L        +G K  GLC +N I+++  + + M+
Sbjct: 471 YIKAKMMEKAMDILEEMNKKNLKPDLLL-------YGTKIWGLCRQNEIEDSMAVIREMM 523

Query: 145 AFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLC 204
             G+  +   Y TLI+ + + G  + A+ L ++M        L  K  + +Y ++ID LC
Sbjct: 524 DCGLTANSYIYTTLIDAYFKVGKTTEAVNLLQEM------QDLGIKITVVTYGVLIDGLC 577

Query: 205 KEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLL 264
           K GLV +A   F  M   G+ P +++ T LI G C     EE   LF EMLD G  P+ L
Sbjct: 578 KIGLVQQAVRYFDHMTRNGLQPNIMIYTALIDGLCKNDCLEEAKNLFNEMLDKGISPDKL 637

Query: 265 TFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSM 324
            +  +ID   K G   EA  L   M++ G+  D   Y SL+ G+   G++  A+ +   M
Sbjct: 638 VYTSLIDGNMKHGNPGEALSLRNRMVEIGMELDLCAYTSLIWGFSRYGQVQLAKSLLDEM 697

Query: 325 HSKGCKHTVVSYNILINGYCKILNVEEAMSLY-----RQIISNGVRQTVITYNTLLSGLF 379
             KG     V    L+  Y ++ ++ EA++L+     R +IS  +  TV +  T ++ L 
Sbjct: 698 LRKGIIPDQVLCICLLRKYYELGDINEALALHDDMARRGLISGTIDITVPSCLTAVTKLH 757

Query: 380 Q--AGQAG 385
           +  A Q+G
Sbjct: 758 KLCASQSG 765



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 98/381 (25%), Positives = 164/381 (43%), Gaps = 50/381 (13%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CK+G+  L EA  FF  M  +   P   ++  L  A  K    +       ++   G+  
Sbjct: 367 CKAGM--LLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLESEMQQAGVNL 424

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFG--------------------- 147
           + +T   L++       GLC + R++EA  LF  ++  G                     
Sbjct: 425 NIVTYTALLD-------GLCEDGRMREAEELFGALLKAGWTLNQQIYTSLFHGYIKAKMM 477

Query: 148 --------------VRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNI 193
                         ++PD++ YGT I G CR   +  ++ + ++M+    + GL +  N 
Sbjct: 478 EKAMDILEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREMM----DCGLTA--NS 531

Query: 194 FSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIE 253
           + Y+ +ID+  K G   +A  L  EM+  GI   VV    LI G C  G  ++    F  
Sbjct: 532 YIYTTLIDAYFKVGKTTEAVNLLQEMQDLGIKITVVTYGVLIDGLCKIGLVQQAVRYFDH 591

Query: 254 MLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGR 313
           M   G +PN++ +  +ID LCK   + EA  L   M+ +G++PD+  Y SL+DG    G 
Sbjct: 592 MTRNGLQPNIMIYTALIDGLCKNDCLEEAKNLFNEMLDKGISPDKLVYTSLIDGNMKHGN 651

Query: 314 IDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNT 373
              A  +   M   G +  + +Y  LI G+ +   V+ A SL  +++  G+    +    
Sbjct: 652 PGEALSLRNRMVEIGMELDLCAYTSLIWGFSRYGQVQLAKSLLDEMLRKGIIPDQVLCIC 711

Query: 374 LLSGLFQAGQAGYAQKLFDEM 394
           LL   ++ G    A  L D+M
Sbjct: 712 LLRKYYELGDINEALALHDDM 732



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 66/254 (25%), Positives = 123/254 (48%), Gaps = 4/254 (1%)

Query: 302 NSLMDGYCLVGRIDTAREIFLSMHSKG--CKHTVVSYNILINGYCKILNVEEAMSLYRQI 359
            S++  + L+GR     + F  + S    C+     ++ L N    +  +EEA   + ++
Sbjct: 148 RSVIKEWILLGREFPGCDFFDMLWSTRNVCRPGFGVFDTLFNVLVDLGMLEEARQCFWKM 207

Query: 360 ISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCV 419
               V   V + N LL  L ++ + G A   F +M +  + P + TYN++I  L +   +
Sbjct: 208 NKFRVLPKVRSCNELLHRLSKSSKGGLALSFFKDMVVAGLSPSVFTYNMVIGCLAREGDL 267

Query: 420 QEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIM 479
           + A  LF  ++       I  +N LIDG  K G L  A  +F ++   G  P V+TY+ +
Sbjct: 268 EAARSLFEEMKAKGLRPDIVTYNSLIDGYGKVGMLTGAVSVFEEMKDAGCEPDVITYNSL 327

Query: 480 IHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPER 539
           I+  C+  ++ +A ++L  M++ G  PNVVT++TL+  F +     +  +    M     
Sbjct: 328 INCFCKFERIPQAFEYLHGMKQRGLQPNVVTYSTLIDAFCKAGMLLEANKFFVDMIRV-- 385

Query: 540 NLVPDDTTFSIVVD 553
            L P++ T++ ++D
Sbjct: 386 GLQPNEFTYTSLID 399


>gi|302757525|ref|XP_002962186.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
 gi|300170845|gb|EFJ37446.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
          Length = 855

 Score =  246 bits (629), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 155/524 (29%), Positives = 257/524 (49%), Gaps = 27/524 (5%)

Query: 55  NLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLN 114
            +++A   F  M  M   P I S+N +   +A     D    F+  ++  G  PD +   
Sbjct: 35  KIDKAIELFLEMPSMGCEPTIVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFT 94

Query: 115 ILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRL 174
            LI+       G C   + +    L    +    RPDV  Y ++I+G+C+ G+L    ++
Sbjct: 95  TLIH-------GFCKAGQPQVGHMLLNQALK-RFRPDVFLYTSVIHGYCKAGDLDTGFKI 146

Query: 175 HKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTL 234
            ++M++     G I   +  +Y ++ID LCK G VD+A ELF  M+  G     V   TL
Sbjct: 147 LEEMLAA----GCIP--DAAAYFVLIDPLCKLGRVDEAYELFERMRKSGCLGDYVTFMTL 200

Query: 235 IHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGL 294
           I      G  +E   L+ EM++ G  P L   + +I  LCK GK++EAN + + ++ + +
Sbjct: 201 IEALSNHGKLDEACELYREMIERGYEPYLEVQDSLIFALCKAGKVDEANEIYQTVVAKKV 260

Query: 295 NPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMS 354
              R  YNSLMDGYC +GR+D   ++ L M        + +YNIL+ G+ +   +++A+ 
Sbjct: 261 ATSRVAYNSLMDGYCKLGRVDDGLKLLLQMVECDNFPDIQTYNILVAGFSRANRLDDALE 320

Query: 355 LYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLC 414
           L++ + S G +    TY T++ GL+ A +   A+  FDE        D+ +Y  +I GL 
Sbjct: 321 LFKLLSSYGCKPNAATYTTIIQGLYDAQRMEEAKAFFDEAL------DVISYTTVIKGLA 374

Query: 415 KNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVV 474
            +  + EA +LF  L+       +  +  +IDGL KAGR+++  + F  +     VPT  
Sbjct: 375 DSKRIDEACELFEKLKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEDMSGSSCVPTRT 434

Query: 475 TYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKM 534
           TY+++I GLC+   L  A      M + GC P+ +T+ TL+ GF + +K  +  +LL  M
Sbjct: 435 TYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVM 494

Query: 535 AE--PERNLVPDDTTFSIVVDLLAKDEKYHECSAV-SKSSYRAC 575
               PE    P   T+  +V    K +  +E   V ++   R C
Sbjct: 495 LTKGPE----PTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGC 534



 Score =  231 bits (589), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 137/465 (29%), Positives = 230/465 (49%), Gaps = 14/465 (3%)

Query: 55  NLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLN 114
            ++EA   F  +     SP + ++  +   + K    +  +  +  +     +P   T  
Sbjct: 378 RIDEACELFEKLKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEDMSGSSCVPTRTTYT 437

Query: 115 ILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRL 174
           ++I+       GLC    + +A  +F+ M+  G  PD ITY TLI+GF +   +  A +L
Sbjct: 438 VVID-------GLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKL 490

Query: 175 HKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTL 234
              M++   E   ++      Y  I+   CK  ++++AKE+  +M+ RG  P + + T+L
Sbjct: 491 LDVMLTKGPEPTAVT------YGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSL 544

Query: 235 IHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGL 294
           +  +   G  EE   +  EM   G  P+++ +  +ID L   G++ EA  + + MI++G 
Sbjct: 545 LSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGC 604

Query: 295 NPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMS 354
            PD  TY +++  +  +G ++ A EI   M   G      +YN L++GY K+  V++A  
Sbjct: 605 APDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFG 664

Query: 355 LYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEM-KLYNVEPDLSTYNILIDGL 413
           +Y +++++G++   +T+N L+ GLF+ G+   A  LF EM +   V P L +Y ILIDGL
Sbjct: 665 VYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKDEVPPTLVSYTILIDGL 724

Query: 414 CKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTV 473
            K   V EA   F  +           +  LI  L KAGR+  A +L   + + G+ P V
Sbjct: 725 GKAGRVSEAFSQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDV 784

Query: 474 VTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGF 518
             YS +I GL     ++ A D    M K GCAPN VT+  L  GF
Sbjct: 785 QAYSALITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVLRRGF 829



 Score =  222 bits (565), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 140/491 (28%), Positives = 234/491 (47%), Gaps = 22/491 (4%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
           P + + N++   + K R  D  I  + ++ S+G  P  ++ N +I+       GL   ++
Sbjct: 18  PDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNTVIS-------GLASIDK 70

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
           + EA   F +MI  G  PDVI + TLI+GFC+ G   V   L  + +          + +
Sbjct: 71  MDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQALKR-------FRPD 123

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
           +F Y+ +I   CK G +D   ++  EM   G  P       LI   C  G  +E   LF 
Sbjct: 124 VFLYTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAYELFE 183

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
            M   G   + +TF  +I+ L   GK++EA  L   MI+RG  P     +SL+   C  G
Sbjct: 184 RMRKSGCLGDYVTFMTLIEALSNHGKLDEACELYREMIERGYEPYLEVQDSLIFALCKAG 243

Query: 313 RIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYN 372
           ++D A EI+ ++ +K    + V+YN L++GYCK+  V++ + L  Q++       + TYN
Sbjct: 244 KVDEANEIYQTVVAKKVATSRVAYNSLMDGYCKLGRVDDGLKLLLQMVECDNFPDIQTYN 303

Query: 373 TLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMN 432
            L++G  +A +   A +LF  +  Y  +P+ +TY  +I GL     ++EA   F      
Sbjct: 304 ILVAGFSRANRLDDALELFKLLSSYGCKPNAATYTTIIQGLYDAQRMEEAKAFFDE---- 359

Query: 433 KFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKA 492
                +  +  +I GL  + R+D A ELF KL   G  P VV Y+ +I GL + G++E  
Sbjct: 360 --ALDVISYTTVIKGLADSKRIDEACELFEKLKTAGCSPNVVAYTAVIDGLLKAGRIEDG 417

Query: 493 NDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVV 552
                 M  + C P   T+  ++ G  +        ++  +M   ++  VPD  T++ ++
Sbjct: 418 LKNFEDMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMV--QKGCVPDTITYTTLI 475

Query: 553 DLLAKDEKYHE 563
           D  +K  K  E
Sbjct: 476 DGFSKASKMDE 486



 Score =  221 bits (564), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 147/576 (25%), Positives = 252/576 (43%), Gaps = 68/576 (11%)

Query: 34  VSSPETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDA 93
           V++     N  +   CK G   +++       M      P I ++N+L    ++    D 
Sbjct: 260 VATSRVAYNSLMDGYCKLG--RVDDGLKLLLQMVECDNFPDIQTYNILVAGFSRANRLDD 317

Query: 94  VISFYRKLVSIGLLPDFLTLNILINCFGNKER----------------------GLCVEN 131
            +  ++ L S G  P+  T   +I    + +R                      GL    
Sbjct: 318 ALELFKLLSSYGCKPNAATYTTIIQGLYDAQRMEEAKAFFDEALDVISYTTVIKGLADSK 377

Query: 132 RIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKT 191
           RI EA  LF+ +   G  P+V+ Y  +I+G  + G +   L+  + M      +G     
Sbjct: 378 RIDEACELFEKLKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEDM------SGSSCVP 431

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
              +Y+++ID LCK  ++  A ++F +M  +G  P  +  TTLI GF  A   +E   L 
Sbjct: 432 TRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLL 491

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCK-----------------------------------G 276
             ML  GP P  +T+  ++   CK                                    
Sbjct: 492 DVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSK 551

Query: 277 GKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSY 336
           G+  EA  +L  M  RG  PD   Y SL+D     GR+  AR +F SM  KGC    ++Y
Sbjct: 552 GRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTY 611

Query: 337 NILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKL 396
             +I  + KI NVE A  +   +  +GV      YN+L+ G  +  +   A  ++D M  
Sbjct: 612 GTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVA 671

Query: 397 YNVEPDLSTYNILIDGLCKNNCVQEAVKLF-HMLEMNKFEFGIEIFNCLIDGLCKAGRLD 455
             ++P+  T+N+L+ GL K+     A  LF  MLE ++    +  +  LIDGL KAGR+ 
Sbjct: 672 SGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKDEVPPTLVSYTILIDGLGKAGRVS 731

Query: 456 NAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLM 515
            A+  F ++  +G++P   TY+ +I+ L + G++ +A   +  M K G  P+V  ++ L+
Sbjct: 732 EAFSQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALI 791

Query: 516 HGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIV 551
            G + ++      ++  +M   +R   P++ T+ ++
Sbjct: 792 TGLIDSSMVDTAWDVFQEMM--KRGCAPNEVTYKVL 825



 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 121/417 (29%), Positives = 211/417 (50%), Gaps = 14/417 (3%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
           P  +++ ++   + K +        + ++V  G +PD +T   LI+ F          ++
Sbjct: 431 PTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKA-------SK 483

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
           + EA  L   M+  G  P  +TYG++++GFC+   ++ A  +  +M     E GL   T+
Sbjct: 484 MDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTS 543

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
           + SY +       +G  ++A ++  EM  RG  P V++ T+LI      G   E   +F 
Sbjct: 544 LLSYYL------SKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFD 597

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
            M++ G  P+ LT+  +I    K G +  A  +LELM + G+ PD F YNSLMDGY  + 
Sbjct: 598 SMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLE 657

Query: 313 RIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIIS-NGVRQTVITY 371
           R+D A  ++  M + G K   V++N+L++G  K    + A SL+++++  + V  T+++Y
Sbjct: 658 RVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKDEVPPTLVSY 717

Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
             L+ GL +AG+   A   F EM    + P+  TY  LI  L K   + EA KL   +  
Sbjct: 718 TILIDGLGKAGRVSEAFSQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVK 777

Query: 432 NKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGK 488
                 ++ ++ LI GL  +  +D AW++F ++ ++G  P  VTY ++  G    G+
Sbjct: 778 LGVNPDVQAYSALITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVLRRGFRAAGR 834



 Score =  198 bits (503), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 137/479 (28%), Positives = 223/479 (46%), Gaps = 41/479 (8%)

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
           ++EA    K M   G+ PDV+    ++NG C+   +  A+ L  +M S      +  +  
Sbjct: 1   MEEALDCLKEMHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPS------MGCEPT 54

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
           I SY+ +I  L     +D+A + F  M   G  P V+  TTLIHGFC AG   +V  + +
Sbjct: 55  IVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQ-PQVGHMLL 113

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
                  RP++  +  +I   CK G ++    +LE M+  G  PD   Y  L+D  C +G
Sbjct: 114 NQALKRFRPDVFLYTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLG 173

Query: 313 RIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYN 372
           R+D A E+F  M   GC    V++  LI        ++EA  LYR++I  G    +   +
Sbjct: 174 RVDEAYELFERMRKSGCLGDYVTFMTLIEALSNHGKLDEACELYREMIERGYEPYLEVQD 233

Query: 373 TLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVK-LFHMLEM 431
           +L+  L +AG+   A +++  +    V      YN L+DG CK   V + +K L  M+E 
Sbjct: 234 SLIFALCKAGKVDEANEIYQTVVAKKVATSRVAYNSLMDGYCKLGRVDDGLKLLLQMVEC 293

Query: 432 NKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEK 491
           + F   I+ +N L+ G  +A RLD+A ELF  L   G  P   TY+ +I GL    ++E+
Sbjct: 294 DNFP-DIQTYNILVAGFSRANRLDDALELFKLLSSYGCKPNAATYTTIIQGLYDAQRMEE 352

Query: 492 ANDFL---------------------------LY--MEKNGCAPNVVTFNTLMHGFLQNN 522
           A  F                            L+  ++  GC+PNVV +  ++ G L+  
Sbjct: 353 AKAFFDEALDVISYTTVIKGLADSKRIDEACELFEKLKTAGCSPNVVAYTAVIDGLLKAG 412

Query: 523 KTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE-CSAVSKSSYRACLYVTI 580
           +    ++    M+    + VP  TT+++V+D L K +   + C    +   + C+  TI
Sbjct: 413 RIEDGLKNFEDMS--GSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTI 469



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 99/342 (28%), Positives = 157/342 (45%), Gaps = 18/342 (5%)

Query: 45  LHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSI 104
           +H  CK  +IN  EA+     M      P +  F  L          +       ++ + 
Sbjct: 510 VHGFCKLDMIN--EAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTAR 567

Query: 105 GLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCR 164
           G  PD +    LI+        L    R+ EA  +F +MI  G  PD +TYGT+I  F +
Sbjct: 568 GCAPDVILYTSLIDL-------LFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSK 620

Query: 165 TGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGI 224
            GN+  A  + + M     ++G+    + F+Y+ ++D   K   VD+A  ++  M   GI
Sbjct: 621 IGNVEAAGEILELMA----KSGV--GPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGI 674

Query: 225 NPAVVVCTTLIHGFCCAGNWEEVNGLFIEML--DLGPRPNLLTFNVMIDCLCKGGKINEA 282
            P  V    L+HG    G  +    LF EML  D  P P L+++ ++ID L K G+++EA
Sbjct: 675 KPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKDEVP-PTLVSYTILIDGLGKAGRVSEA 733

Query: 283 NGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILING 342
               + MI RG+ P+  TY SL+      GRI  A+++   M   G    V +Y+ LI G
Sbjct: 734 FSQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITG 793

Query: 343 YCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQA 384
                 V+ A  ++++++  G     +TY  L  G   AG+A
Sbjct: 794 LIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVLRRGFRAAGRA 835


>gi|255542744|ref|XP_002512435.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223548396|gb|EEF49887.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 546

 Score =  246 bits (628), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 152/461 (32%), Positives = 239/461 (51%), Gaps = 18/461 (3%)

Query: 79  NLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATW 138
           ++L  A AKN         +++    GL     + N L++       GL     I +  +
Sbjct: 97  DILVWAYAKNLRTRLGFEAFKRASDYGLKLSVTSCNPLMS-------GLVKVGEIGDMEF 149

Query: 139 LFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKM-VSGDYENGLISKTNIFSYS 197
           ++K MI   + P +I++  +ING C+ G L+ A  + + M V G          N+ +Y+
Sbjct: 150 VYKEMIRRRIEPTLISFNIVINGLCKVGKLNKAGDIIEDMKVRG-------VSANVITYN 202

Query: 198 IIIDSLCKEGLVDK---AKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEM 254
            +ID  CK G + K   A  +  EM+  GI P  V    LI GFC   N      +F EM
Sbjct: 203 TLIDGYCKMGKIGKMYKADAILKEMRADGICPNEVTFNILIDGFCKDKNVSAAMKVFAEM 262

Query: 255 LDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRI 314
              G +PN++T+N +I+ LC  GK+NEA  L + M+   L P+  T+N+L++G+C    +
Sbjct: 263 NRQGVKPNVVTYNSLINGLCNNGKVNEATALRDQMVNSCLKPNIITHNALLNGFCKNKMV 322

Query: 315 DTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTL 374
             A E+F  M  +G    V +YNILI+ YCK  N+E+A +LYR ++  GV   V TYN L
Sbjct: 323 KQAGELFDDMPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNCL 382

Query: 375 LSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKF 434
           ++GL + G    A+ L  EM   +++ DL TYNILID LC    +++A++L   +     
Sbjct: 383 IAGLCRKGDLEAARNLVSEMDTKHLKADLITYNILIDSLCNKGEMKKALRLLDEMCRKGL 442

Query: 435 EFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKAND 494
           +     +N +IDG CK G L  A  L  ++ + G +  V TY+++I G C+K KLE AN 
Sbjct: 443 KPSQLTYNTMIDGYCKEGNLRAALNLRSQMEKVGRLANVATYNVLIKGFCKKDKLEDANG 502

Query: 495 FLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMA 535
            L  M + G  PN +T+  +    ++      +   L+K+A
Sbjct: 503 LLNEMLEKGLIPNRMTYEIVTEEMMEKGFVPDIEGHLYKVA 543



 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 115/348 (33%), Positives = 194/348 (55%), Gaps = 5/348 (1%)

Query: 214 ELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCL 273
           E F      G+  +V  C  L+ G    G   ++  ++ EM+     P L++FN++I+ L
Sbjct: 114 EAFKRASDYGLKLSVTSCNPLMSGLVKVGEIGDMEFVYKEMIRRRIEPTLISFNIVINGL 173

Query: 274 CKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRID---TAREIFLSMHSKGCK 330
           CK GK+N+A  ++E M  RG++ +  TYN+L+DGYC +G+I     A  I   M + G  
Sbjct: 174 CKVGKLNKAGDIIEDMKVRGVSANVITYNTLIDGYCKMGKIGKMYKADAILKEMRADGIC 233

Query: 331 HTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKL 390
              V++NILI+G+CK  NV  AM ++ ++   GV+  V+TYN+L++GL   G+   A  L
Sbjct: 234 PNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATAL 293

Query: 391 FDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCK 450
            D+M    ++P++ T+N L++G CKN  V++A +LF  +        +  +N LID  CK
Sbjct: 294 RDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCK 353

Query: 451 AGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVT 510
              +++A+ L+  +  KG+ P V TY+ +I GLCRKG LE A + +  M+      +++T
Sbjct: 354 DENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRKGDLEAARNLVSEMDTKHLKADLIT 413

Query: 511 FNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKD 558
           +N L+       +  K + LL +M    + L P   T++ ++D   K+
Sbjct: 414 YNILIDSLCNKGEMKKALRLLDEMC--RKGLKPSQLTYNTMIDGYCKE 459



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 116/369 (31%), Positives = 183/369 (49%), Gaps = 24/369 (6%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLL------FGAVAKNRHYDAVISFYRKLV 102
           CK G   LN+A      M     S  + ++N L       G + K    DA++   +++ 
Sbjct: 174 CKVG--KLNKAGDIIEDMKVRGVSANVITYNTLIDGYCKMGKIGKMYKADAIL---KEMR 228

Query: 103 SIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGF 162
           + G+ P+ +T NILI+       G C +  +  A  +F  M   GV+P+V+TY +LING 
Sbjct: 229 ADGICPNEVTFNILID-------GFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLINGL 281

Query: 163 CRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGR 222
           C  G ++ A  L  +MV+         K NI +++ +++  CK  +V +A ELF +M  +
Sbjct: 282 CNNGKVNEATALRDQMVNS------CLKPNIITHNALLNGFCKNKMVKQAGELFDDMPKQ 335

Query: 223 GINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEA 282
           GI P V     LI  +C   N E+   L+  ML  G  P++ T+N +I  LC+ G +  A
Sbjct: 336 GITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRKGDLEAA 395

Query: 283 NGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILING 342
             L+  M  + L  D  TYN L+D  C  G +  A  +   M  KG K + ++YN +I+G
Sbjct: 396 RNLVSEMDTKHLKADLITYNILIDSLCNKGEMKKALRLLDEMCRKGLKPSQLTYNTMIDG 455

Query: 343 YCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPD 402
           YCK  N+  A++L  Q+   G    V TYN L+ G  +  +   A  L +EM    + P+
Sbjct: 456 YCKEGNLRAALNLRSQMEKVGRLANVATYNVLIKGFCKKDKLEDANGLLNEMLEKGLIPN 515

Query: 403 LSTYNILID 411
             TY I+ +
Sbjct: 516 RMTYEIVTE 524



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 81/253 (32%), Positives = 143/253 (56%), Gaps = 7/253 (2%)

Query: 319 EIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGL 378
           E F      G K +V S N L++G  K+  + +   +Y+++I   +  T+I++N +++GL
Sbjct: 114 EAFKRASDYGLKLSVTSCNPLMSGLVKVGEIGDMEFVYKEMIRRRIEPTLISFNIVINGL 173

Query: 379 FQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGI 438
            + G+   A  + ++MK+  V  ++ TYN LIDG CK   + +  K   +L+  + + GI
Sbjct: 174 CKVGKLNKAGDIIEDMKVRGVSANVITYNTLIDGYCKMGKIGKMYKADAILKEMRAD-GI 232

Query: 439 ---EI-FNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKAND 494
              E+ FN LIDG CK   +  A ++F ++ ++G+ P VVTY+ +I+GLC  GK+ +A  
Sbjct: 233 CPNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATA 292

Query: 495 FLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDL 554
               M  +   PN++T N L++GF +N    +  EL   M  P++ + P+ TT++I++D 
Sbjct: 293 LRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELFDDM--PKQGITPNVTTYNILIDA 350

Query: 555 LAKDEKYHECSAV 567
             KDE   +  A+
Sbjct: 351 YCKDENMEDAFAL 363


>gi|359479250|ref|XP_002275790.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g01110-like [Vitis vinifera]
          Length = 746

 Score =  246 bits (628), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 159/498 (31%), Positives = 257/498 (51%), Gaps = 25/498 (5%)

Query: 75  ISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIK 134
           I++ N L G + K    D     Y+++V  G+  +  TLNI+IN        LC   +I+
Sbjct: 219 INACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMIN-------ALCKNQKIE 271

Query: 135 EATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIF 194
                  +M   GV PDV+TY TLIN +CR G L  A  L   M SG    GL  K  +F
Sbjct: 272 NTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSM-SG---KGL--KPCVF 325

Query: 195 SYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEM 254
           +Y+ II+ LCK G   +AK +  EM   G++P       L+   C   N  +   +F EM
Sbjct: 326 TYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEM 385

Query: 255 LDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRI 314
              G  P+L++F+ +I  L K G +++A      M   GL PD   Y  L+ G+C  G +
Sbjct: 386 PSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVM 445

Query: 315 DTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTL 374
             A ++   M  +GC   VV+YN ++NG CK   + EA  L+ ++   GV     T+ TL
Sbjct: 446 SEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTL 505

Query: 375 LSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFH-----ML 429
           ++G  + G    A  LF+ M   N++PD+ TYN LIDG CK + +++  +L++      +
Sbjct: 506 INGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRI 565

Query: 430 EMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKL 489
             N   +GI     LI+G C  G +  A+ L+ ++ +KG   T++T + ++ G CR G  
Sbjct: 566 YPNHISYGI-----LINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNA 620

Query: 490 EKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFS 549
            KA++FL  M   G  P+ +T+NTL++GF++     +   L++KM      L+PD  T++
Sbjct: 621 VKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENS--GLLPDVITYN 678

Query: 550 IVVDLLAKDEKYHECSAV 567
           ++++  ++  +  E   +
Sbjct: 679 VILNGFSRQGRMQEAELI 696



 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 151/501 (30%), Positives = 256/501 (51%), Gaps = 40/501 (7%)

Query: 75  ISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIK 134
           + + N++  A+ KN+  +   SF   +   G+ PD +T N LIN +       C +  ++
Sbjct: 254 VYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAY-------CRQGLLE 306

Query: 135 EATWLFKNMIAFGVRPDVITYGTLINGFCRTGN-------LSVALRLHKKMVSGDYE--- 184
           EA  L  +M   G++P V TY  +ING C+TG        L   L++     +  Y    
Sbjct: 307 EAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILL 366

Query: 185 ------NGLISKTNIF-------------SYSIIIDSLCKEGLVDKAKELFLEMKGRGIN 225
                 + ++    IF             S+S +I  L K G +D+A + F +MK  G+ 
Sbjct: 367 VECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLA 426

Query: 226 PAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGL 285
           P  V+ T LI GFC  G   E   +  EML+ G   +++T+N +++ LCK   ++EA+ L
Sbjct: 427 PDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADEL 486

Query: 286 LELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCK 345
              M +RG+ PD +T+ +L++GY   G ++ A  +F  M  +  K  VV+YN LI+G+CK
Sbjct: 487 FTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCK 546

Query: 346 ILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLST 405
              +E+   L+  +IS  +    I+Y  L++G    G    A +L+DEM     E  + T
Sbjct: 547 GSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIIT 606

Query: 406 YNILIDGLCK-NNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKL 464
            N ++ G C+  N V+    L +ML       GI  +N LI+G  K   +D A+ L +K+
Sbjct: 607 CNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGI-TYNTLINGFIKEENMDRAFALVNKM 665

Query: 465 PQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKT 524
              GL+P V+TY+++++G  R+G++++A   +L M + G  P+  T+ +L++G +  N  
Sbjct: 666 ENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNL 725

Query: 525 SKVVELLHKMAEPERNLVPDD 545
            +   +  +M   +R  VPDD
Sbjct: 726 KEAFRVHDEML--QRGFVPDD 744



 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 143/491 (29%), Positives = 243/491 (49%), Gaps = 17/491 (3%)

Query: 18  KVKLSSLFKSPRQIAAVSSPETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISS 77
           K++ +  F S  +   V       N  ++  C+ G+  L EA      M+     P + +
Sbjct: 269 KIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGL--LEEAFELMDSMSGKGLKPCVFT 326

Query: 78  FNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNIL-INCFGNKERGLCVENRIKEA 136
           +N +   + K   Y        +++ IG+ PD  T NIL + C        C  + + +A
Sbjct: 327 YNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVEC--------CRNDNMMDA 378

Query: 137 TWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSY 196
             +F  M + GV PD++++  LI    + G L  AL+  +     D +N  ++  N+  Y
Sbjct: 379 ERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFR-----DMKNAGLAPDNVI-Y 432

Query: 197 SIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLD 256
           +I+I   C+ G++ +A ++  EM  +G    VV   T+++G C      E + LF EM +
Sbjct: 433 TILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTE 492

Query: 257 LGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDT 316
            G  P+  TF  +I+   K G +N+A  L E+MIQR L PD  TYN+L+DG+C    ++ 
Sbjct: 493 RGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEK 552

Query: 317 AREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLS 376
             E++  M S+      +SY ILINGYC +  V EA  L+ +++  G   T+IT NT++ 
Sbjct: 553 VNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVK 612

Query: 377 GLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEF 436
           G  +AG A  A +    M L  + PD  TYN LI+G  K   +  A  L + +E +    
Sbjct: 613 GYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLP 672

Query: 437 GIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFL 496
            +  +N +++G  + GR+  A  +  K+ ++G+ P   TY+ +I+G   +  L++A    
Sbjct: 673 DVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVH 732

Query: 497 LYMEKNGCAPN 507
             M + G  P+
Sbjct: 733 DEMLQRGFVPD 743



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 111/367 (30%), Positives = 195/367 (53%), Gaps = 2/367 (0%)

Query: 191 TNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGL 250
           +N   + +++ +  +   + +  E F  +K +G+  ++  C +L+ G    G  +    +
Sbjct: 182 SNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEI 241

Query: 251 FIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCL 310
           + E++  G + N+ T N+MI+ LCK  KI      L  M ++G+ PD  TYN+L++ YC 
Sbjct: 242 YQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCR 301

Query: 311 VGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVIT 370
            G ++ A E+  SM  KG K  V +YN +ING CK      A  +  +++  G+     T
Sbjct: 302 QGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTAT 361

Query: 371 YNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLE 430
           YN LL    +      A+++FDEM    V PDL +++ LI  L KN C+ +A+K F  ++
Sbjct: 362 YNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMK 421

Query: 431 MNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLE 490
                    I+  LI G C+ G +  A ++  ++ ++G V  VVTY+ +++GLC++  L 
Sbjct: 422 NAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLS 481

Query: 491 KANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSI 550
           +A++    M + G  P+  TF TL++G+ ++   +K V L   M   +RNL PD  T++ 
Sbjct: 482 EADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMI--QRNLKPDVVTYNT 539

Query: 551 VVDLLAK 557
           ++D   K
Sbjct: 540 LIDGFCK 546



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 77/299 (25%), Positives = 148/299 (49%), Gaps = 20/299 (6%)

Query: 260 RPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTARE 319
           + +L +F+ MI  L +  ++ +A  ++  M+++                  V R++    
Sbjct: 129 KHSLQSFSAMIHILVRSRRLPDAQAVILRMVRKSG----------------VSRVEIVES 172

Query: 320 IFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLF 379
           + L+  +  C    + +++L+  Y +   + E    +R + S G+  ++   N+LL GL 
Sbjct: 173 LVLTYGN--CGSNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLV 230

Query: 380 QAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIE 439
           + G    A +++ E+    V+ ++ T NI+I+ LCKN  ++        +E       + 
Sbjct: 231 KVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVV 290

Query: 440 IFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYM 499
            +N LI+  C+ G L+ A+EL   +  KGL P V TY+ +I+GLC+ GK  +A   L  M
Sbjct: 291 TYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEM 350

Query: 500 EKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKD 558
            K G +P+  T+N L+    +N+       +  +M  P + +VPD  +FS ++ LL+K+
Sbjct: 351 LKIGMSPDTATYNILLVECCRNDNMMDAERIFDEM--PSQGVVPDLVSFSALIGLLSKN 407


>gi|356499327|ref|XP_003518493.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Glycine max]
          Length = 725

 Score =  246 bits (628), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 150/482 (31%), Positives = 247/482 (51%), Gaps = 20/482 (4%)

Query: 72  SPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVEN 131
           SP + +F ++  A+      D+  S  R +   G +P+ +    LI+        LC  N
Sbjct: 202 SPTVYTFGVVMKALCMVSEVDSACSLLRDMAKHGCVPNSVIYQTLIH-------ALCENN 254

Query: 132 RIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKT 191
           R+ EA  L ++M      PDV T+  +I+G CR G +  A +L  +M+   +       T
Sbjct: 255 RVSEALQLLEDMFLMCCEPDVQTFNDVIHGLCRAGRIHEAAKLLDRMLLRGF------ST 308

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGL- 250
           +  +Y  ++  LC+ G VD+A+ L  ++     NP  V+  TLI G+  +G +EE   L 
Sbjct: 309 DALTYGYLMHGLCRMGQVDEARALLNKIP----NPNTVLYNTLISGYVASGRFEEAKDLL 364

Query: 251 FIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCL 310
           +  M+  G  P+  TFN+MID L K G +  A  LL  M+ +   P+  TY  L++G+C 
Sbjct: 365 YNNMVIAGYEPDAYTFNIMIDGLVKKGYLVSALELLNEMVAKRFEPNVITYTILINGFCK 424

Query: 311 VGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVIT 370
            GR++ A EI  SM +KG     V YN LI   CK  N+EEA+ L+ ++   G +  + T
Sbjct: 425 QGRLEEAAEIVNSMSAKGLSLNTVGYNCLICALCKDGNIEEALQLFGEMSGKGCKPDIYT 484

Query: 371 YNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLE 430
           +N+L++GL +  +   A  L+ +M L  V  +  TYN L+      + +Q+A KL   + 
Sbjct: 485 FNSLINGLCKNHKMEEALSLYHDMFLEGVIANTVTYNTLVHAFLMRDSIQQAFKLVDEML 544

Query: 431 MNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLE 490
                     +N LI  LCK G ++    LF ++  KG+ PT+++ +I+I GLCR GK+ 
Sbjct: 545 FRGCPLDNITYNGLIKALCKTGAVEKGLGLFEEMLGKGIFPTIISCNILISGLCRTGKVN 604

Query: 491 KANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSI 550
            A  FL  M   G  P++VT+N+L++G  +     +   L +K+      + PD  T++ 
Sbjct: 605 DALKFLQDMIHRGLTPDIVTYNSLINGLCKMGHVQEASNLFNKLQ--SEGIRPDAITYNT 662

Query: 551 VV 552
           ++
Sbjct: 663 LI 664



 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 141/453 (31%), Positives = 225/453 (49%), Gaps = 21/453 (4%)

Query: 36  SPETQ-LNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAV 94
            P+ Q  N+ +H  C++G I+  EA      M     S    ++  L   + +    D  
Sbjct: 272 EPDVQTFNDVIHGLCRAGRIH--EAAKLLDRMLLRGFSTDALTYGYLMHGLCRMGQVDEA 329

Query: 95  ISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEAT-WLFKNMIAFGVRPDVI 153
            +   K+ +    P+ +  N LI+       G     R +EA   L+ NM+  G  PD  
Sbjct: 330 RALLNKIPN----PNTVLYNTLIS-------GYVASGRFEEAKDLLYNNMVIAGYEPDAY 378

Query: 154 TYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAK 213
           T+  +I+G  + G L  AL L  +MV+  +E       N+ +Y+I+I+  CK+G +++A 
Sbjct: 379 TFNIMIDGLVKKGYLVSALELLNEMVAKRFE------PNVITYTILINGFCKQGRLEEAA 432

Query: 214 ELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCL 273
           E+   M  +G++   V    LI   C  GN EE   LF EM   G +P++ TFN +I+ L
Sbjct: 433 EIVNSMSAKGLSLNTVGYNCLICALCKDGNIEEALQLFGEMSGKGCKPDIYTFNSLINGL 492

Query: 274 CKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTV 333
           CK  K+ EA  L   M   G+  +  TYN+L+  + +   I  A ++   M  +GC    
Sbjct: 493 CKNHKMEEALSLYHDMFLEGVIANTVTYNTLVHAFLMRDSIQQAFKLVDEMLFRGCPLDN 552

Query: 334 VSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDE 393
           ++YN LI   CK   VE+ + L+ +++  G+  T+I+ N L+SGL + G+   A K   +
Sbjct: 553 ITYNGLIKALCKTGAVEKGLGLFEEMLGKGIFPTIISCNILISGLCRTGKVNDALKFLQD 612

Query: 394 MKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGR 453
           M    + PD+ TYN LI+GLCK   VQEA  LF+ L+          +N LI   C  G 
Sbjct: 613 MIHRGLTPDIVTYNSLINGLCKMGHVQEASNLFNKLQSEGIRPDAITYNTLISRHCHEGM 672

Query: 454 LDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRK 486
            ++A  L +K    G +P  VT+SI+I+ + +K
Sbjct: 673 FNDACLLLYKGVDSGFIPNEVTWSILINYIVKK 705



 Score = 89.4 bits (220), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 63/256 (24%), Positives = 117/256 (45%), Gaps = 4/256 (1%)

Query: 314 IDTAREIFLSMHS-KGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYN 372
           I T+ E+F    + KG  HT  +  +LI+    + + +    L +Q+   G+      + 
Sbjct: 79  IPTSMELFQRAGAQKGYSHTFDACYLLIDKLGAVGDFKVIEKLLKQMKDEGLLFKESLFI 138

Query: 373 TLLSGLFQAGQAGYAQKLF-DEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
            ++    +AG  G A +L  D   +Y+ +P   +YN+++D L   +C + A  +F+ +  
Sbjct: 139 LIMKHYGKAGLPGQATRLLLDMWGVYSCDPTFKSYNVVLDILVDGDCPRVAPNVFYDMLS 198

Query: 432 NKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEK 491
                 +  F  ++  LC    +D+A  L   + + G VP  V Y  +IH LC   ++ +
Sbjct: 199 RGVSPTVYTFGVVMKALCMVSEVDSACSLLRDMAKHGCVPNSVIYQTLIHALCENNRVSE 258

Query: 492 ANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIV 551
           A   L  M    C P+V TFN ++HG  +  +  +  +LL +M    R    D  T+  +
Sbjct: 259 ALQLLEDMFLMCCEPDVQTFNDVIHGLCRAGRIHEAAKLLDRML--LRGFSTDALTYGYL 316

Query: 552 VDLLAKDEKYHECSAV 567
           +  L +  +  E  A+
Sbjct: 317 MHGLCRMGQVDEARAL 332


>gi|302762244|ref|XP_002964544.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
 gi|300168273|gb|EFJ34877.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
          Length = 528

 Score =  246 bits (627), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 144/490 (29%), Positives = 248/490 (50%), Gaps = 24/490 (4%)

Query: 79  NLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATW 138
           N++ G + +       +  YR++ +    PDFLT   L++       GL    R+++A  
Sbjct: 9   NVVIGGLCRAGRLRHALGVYRQM-NDAHPPDFLTYTKLVH-------GLSKARRLRDAVQ 60

Query: 139 LFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSI 198
           + + M++    PD  T   ++   C    +  A  L ++M+      G+ +  N  +YS 
Sbjct: 61  VLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEML----HRGMAA--NAITYSA 114

Query: 199 IIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLG 258
           ++D LCK   +D+A  L   M  RG  P VV   ++I GFC A   +E +G   +M+  G
Sbjct: 115 LVDGLCKCERLDEAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEG 174

Query: 259 PRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAR 318
             P+++T+  +I   CK   +     LL  + +RG  PD  TY++++DG C  GR+  A 
Sbjct: 175 CHPDIITYTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAV 234

Query: 319 EIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGL 378
           +IF  M    C  T ++YN LI GYC+  +++EA+ L  +++ +     V+TY TL+S  
Sbjct: 235 DIFEEM---SCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAF 291

Query: 379 FQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGI 438
            + G+   A +LF +M    + PD+ T+  L+DGLC    +++A++L   +        I
Sbjct: 292 CKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTI 351

Query: 439 EIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLY 498
             +NC++DG CKA ++  A EL      +G VP  VTY+I++ G CR G+ ++A  +L  
Sbjct: 352 YTYNCVVDGYCKANQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQ 411

Query: 499 MEKNG--CAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLA 556
           +   G  C  +V  +  ++    ++ +T   V+   +M   +R  VP   TF+ VV  L 
Sbjct: 412 LNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMI--QRGYVPAAATFATVVFALC 469

Query: 557 K---DEKYHE 563
           K    ++ HE
Sbjct: 470 KAHQPQQAHE 479



 Score =  228 bits (581), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 140/523 (26%), Positives = 241/523 (46%), Gaps = 41/523 (7%)

Query: 44  FLHENCKSGIINLNEARYFFGYMTHMQPSPPIS--SFNLLFGAVAKNRHYDAVISFYRKL 101
            LH     G+      R+  G    M  + P    ++  L   ++K R     +   +++
Sbjct: 6   LLHNVVIGGLCRAGRLRHALGVYRQMNDAHPPDFLTYTKLVHGLSKARRLRDAVQVLQEM 65

Query: 102 VSIGLLPDFLTLNILIN--CFGNKER--------------------------GLCVENRI 133
           VS   +PD  TL +++   C G++                            GLC   R+
Sbjct: 66  VSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCERL 125

Query: 134 KEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNI 193
            EA  L + M   G  P V+TY ++I GFCR   +  A    ++MV+           +I
Sbjct: 126 DEAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEG------CHPDI 179

Query: 194 FSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIE 253
            +Y+ +I   CK   V +  EL  E+  RG  P +V  +T+I G C AG   +   +F E
Sbjct: 180 ITYTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEE 239

Query: 254 MLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGR 313
           M      P  +T+N +I   C+ G ++EA  LL  M+     PD  TY +LM  +C +GR
Sbjct: 240 M---SCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGR 296

Query: 314 IDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNT 373
           +D A E+F  M +      VV++  L++G C    +E+A+ L  +I   G   T+ TYN 
Sbjct: 297 LDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNC 356

Query: 374 LLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHML--EM 431
           ++ G  +A Q   A++L  + +     P+  TYNIL+ G C+     +A++    L  E 
Sbjct: 357 VVDGYCKANQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEG 416

Query: 432 NKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEK 491
                 + ++  ++D LC+ GR D+A + + ++ Q+G VP   T++ ++  LC+  + ++
Sbjct: 417 GPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQ 476

Query: 492 ANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKM 534
           A++ L  M K G  P   T + ++  + +     K  EL  ++
Sbjct: 477 AHELLEEMIKYGHTPGPGTCDAVVSAYCRAGMIQKADELASEL 519



 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 121/403 (30%), Positives = 209/403 (51%), Gaps = 12/403 (2%)

Query: 150 PDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLV 209
           P  + +  +I G CR G L  AL ++++M             +  +Y+ ++  L K   +
Sbjct: 3   PGTLLHNVVIGGLCRAGRLRHALGVYRQMNDA-------HPPDFLTYTKLVHGLSKARRL 55

Query: 210 DKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVM 269
             A ++  EM      P     T ++   C     ++   L  EML  G   N +T++ +
Sbjct: 56  RDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSAL 115

Query: 270 IDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGC 329
           +D LCK  +++EA  L+E M +RG  P   TYNS++ G+C   R+D A      M ++GC
Sbjct: 116 VDGLCKCERLDEAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGC 175

Query: 330 KHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQK 389
              +++Y  LI G+CK  +V   + L  ++   G    ++TY+T++ GL +AG+   A  
Sbjct: 176 HPDIITYTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVD 235

Query: 390 LFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLC 449
           +F+EM   +  P   TYN LI G C+   + EA++L   +  +K    +  +  L+   C
Sbjct: 236 IFEEM---SCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFC 292

Query: 450 KAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVV 509
           K GRLD+A+ELF ++    L P VVT++ ++ GLC +G++E A + L  + + GC P + 
Sbjct: 293 KMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIY 352

Query: 510 TFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVV 552
           T+N ++ G+ + N+  K  EL+       R  VP+  T++I+V
Sbjct: 353 TYNCVVDGYCKANQVRKAEELVADFR--SRGFVPNTVTYNILV 393



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 98/381 (25%), Positives = 163/381 (42%), Gaps = 53/381 (13%)

Query: 55  NLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLN 114
            ++EA  F   M      P I ++  L G   K+R     +    ++   G  PD +T +
Sbjct: 159 RVDEAHGFMEQMVAEGCHPDIITYTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYS 218

Query: 115 ILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRL 174
            +I+       GLC   R+++A  +F+ M      P  ITY +LI G+CR G++  A+RL
Sbjct: 219 TVID-------GLCKAGRLRDAVDIFEEM---SCAPTAITYNSLIGGYCRAGDMDEAIRL 268

Query: 175 HKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTL 234
             KMV            ++ +Y+ ++ + CK G +D A ELF +M    ++P VV  T+L
Sbjct: 269 LGKMVDDK------CAPDVVTYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSL 322

Query: 235 IHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGL 294
           + G C  G  E+   L  E+   G  P + T+N ++D  CK  ++ +A  L+     RG 
Sbjct: 323 VDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKANQVRKAEELVADFRSRGF 382

Query: 295 NPDRFTYNSL-------------------------------------MDGYCLVGRIDTA 317
            P+  TYN L                                     +D  C  GR D A
Sbjct: 383 VPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDA 442

Query: 318 REIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSG 377
            + +  M  +G      ++  ++   CK    ++A  L  ++I  G      T + ++S 
Sbjct: 443 VQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSA 502

Query: 378 LFQAGQAGYAQKLFDEMKLYN 398
             +AG    A +L  E++LY 
Sbjct: 503 YCRAGMIQKADELASELRLYT 523



 Score = 59.3 bits (142), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 39/140 (27%), Positives = 66/140 (47%), Gaps = 4/140 (2%)

Query: 437 GIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFL 496
           G  + N +I GLC+AGRL +A  ++ ++      P  +TY+ ++HGL +  +L  A   L
Sbjct: 4   GTLLHNVVIGGLCRAGRLRHALGVYRQM-NDAHPPDFLTYTKLVHGLSKARRLRDAVQVL 62

Query: 497 LYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLA 556
             M      P+  T   ++      ++     EL+ +M    R +  +  T+S +VD L 
Sbjct: 63  QEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLH--RGMAANAITYSALVDGLC 120

Query: 557 KDEKYHECSA-VSKSSYRAC 575
           K E+  E  A V   + R C
Sbjct: 121 KCERLDEAVALVETMAERGC 140



 Score = 49.7 bits (117), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 27/86 (31%), Positives = 47/86 (54%), Gaps = 5/86 (5%)

Query: 471 PTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGC-APNVVTFNTLMHGFLQNNKTSKVVE 529
           P  + ++++I GLCR G+L  A    +Y + N    P+ +T+  L+HG  +  +    V+
Sbjct: 3   PGTLLHNVVIGGLCRAGRLRHA--LGVYRQMNDAHPPDFLTYTKLVHGLSKARRLRDAVQ 60

Query: 530 LLHKMAEPERNLVPDDTTFSIVVDLL 555
           +L +M       VPD+TT ++VV  L
Sbjct: 61  VLQEMVSARH--VPDNTTLTVVVQSL 84


>gi|312190399|gb|ADQ43199.1| unknown [Eutrema parvulum]
          Length = 1128

 Score =  246 bits (627), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 147/514 (28%), Positives = 267/514 (51%), Gaps = 25/514 (4%)

Query: 37  PETQ-LNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVI 95
           P+T+  N  LH+  K G    +  + FF  M      P + ++N++   + K    +A  
Sbjct: 96  PKTRSCNGLLHKFAKLG--KTDGVKRFFKDMIGAGSKPTVFTYNIMIDCMWKEGDIEAAR 153

Query: 96  SFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITY 155
             + ++   GL+PD +T N +I+ +G          R+ +  + F+ M +    PDVITY
Sbjct: 154 GLFEEMKFRGLIPDTVTYNSMIDGYGKV-------GRLDDTVYFFEEMKSMSCEPDVITY 206

Query: 156 GTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKEL 215
            +LIN FC++G L   L  +++M     ++GL  K N+ SYS ++D+ CKE ++ +A + 
Sbjct: 207 NSLINCFCKSGKLPKGLEFYREM----KQSGL--KPNVVSYSTLVDAFCKEDMMQQAIKF 260

Query: 216 FLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCK 275
           +++M+  G  P     T+L+   C  GN  +   L  EML++G   N++T+  +ID LC 
Sbjct: 261 YVDMRRVGHVPNEFTYTSLVDANCKIGNLSDAFRLANEMLEVGVEWNVVTYTALIDGLCD 320

Query: 276 GGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVS 335
             ++ EA  L   M+  G+ P+  +YN+L+ G+     +D A E+   +  +G +  ++ 
Sbjct: 321 AERMKEAEKLFGKMVTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIQPDLLL 380

Query: 336 YNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMK 395
           Y   I G C +  +E A  +  ++  NG++   + Y TL+   F++G       L +EM+
Sbjct: 381 YGTFIWGLCGLEKIEAAKVVMNEMQENGIKANTLIYTTLMDAYFKSGNPTEGLHLLEEMQ 440

Query: 396 LYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIE----IFNCLIDGLCKA 451
             + E  + T+ +LIDGLCKN  V +A+  F  +  +   FG++    ++  +IDGLCK 
Sbjct: 441 ELDHEVTVVTFCVLIDGLCKNKLVSKAIDYFGRMSND---FGLQPNAAVYTAMIDGLCKE 497

Query: 452 GRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTF 511
            ++  A  LF ++ Q+GLVP    Y+ ++ G  ++G + +A      M + G   +++ +
Sbjct: 498 NQVKAATTLFEQMAQEGLVPDRTAYTSLMDGNLKQGNMLEALALRDKMAEIGMKLDLLAY 557

Query: 512 NTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDD 545
            +L+ GF Q N+  K    L +M   E  ++PD+
Sbjct: 558 TSLVWGFSQCNQLQKARSFLEEMIGEE--ILPDE 589



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 123/400 (30%), Positives = 206/400 (51%), Gaps = 43/400 (10%)

Query: 196 YSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEML 255
           +S++ID     G++++A + F +MK   + P    C  L+H F   G  + V   F +M+
Sbjct: 70  FSVLIDL----GMLEEATQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGVKRFFKDMI 125

Query: 256 DLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRID 315
             G +P + T+N+MIDC+ K G I  A GL E M  RGL PD  TYNS++DGY  VGR+D
Sbjct: 126 GAGSKPTVFTYNIMIDCMWKEGDIEAARGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRLD 185

Query: 316 TAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLL 375
                F  M S  C+  V++YN LIN +CK   + + +  YR++  +G++  V++Y+TL+
Sbjct: 186 DTVYFFEEMKSMSCEPDVITYNSLINCFCKSGKLPKGLEFYREMKQSGLKPNVVSYSTLV 245

Query: 376 SGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFH-MLEMNKF 434
               +      A K + +M+     P+  TY  L+D  CK   + +A +L + MLE+   
Sbjct: 246 DAFCKEDMMQQAIKFYVDMRRVGHVPNEFTYTSLVDANCKIGNLSDAFRLANEMLEVG-V 304

Query: 435 EFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKA-- 492
           E+ +  +  LIDGLC A R+  A +LF K+   G++P + +Y+ +IHG  +   +++A  
Sbjct: 305 EWNVVTYTALIDGLCDAERMKEAEKLFGKMVTAGVIPNLASYNALIHGFVKAKNMDRALE 364

Query: 493 -----------NDFLLY----------------------MEKNGCAPNVVTFNTLMHGFL 519
                       D LLY                      M++NG   N + + TLM  + 
Sbjct: 365 LLNELKGRGIQPDLLLYGTFIWGLCGLEKIEAAKVVMNEMQENGIKANTLIYTTLMDAYF 424

Query: 520 QNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDE 559
           ++   ++ + LL +M E +  +     TF +++D L K++
Sbjct: 425 KSGNPTEGLHLLEEMQELDHEVTV--VTFCVLIDGLCKNK 462



 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 133/457 (29%), Positives = 220/457 (48%), Gaps = 44/457 (9%)

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
           ++EAT  F  M  F V P   +   L++ F + G      R  K M+      G  SK  
Sbjct: 79  LEEATQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGVKRFFKDMI------GAGSKPT 132

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
           +F+Y+I+ID + KEG ++ A+ LF EMK RG+ P  V   ++I G+   G  ++    F 
Sbjct: 133 VFTYNIMIDCMWKEGDIEAARGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFE 192

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
           EM  +   P+++T+N +I+C CK GK+ +       M Q GL P+  +Y++L+D +C   
Sbjct: 193 EMKSMSCEPDVITYNSLINCFCKSGKLPKGLEFYREMKQSGLKPNVVSYSTLVDAFCKED 252

Query: 313 RIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYN 372
            +  A + ++ M   G      +Y  L++  CKI N+ +A  L  +++  GV   V+TY 
Sbjct: 253 MMQQAIKFYVDMRRVGHVPNEFTYTSLVDANCKIGNLSDAFRLANEMLEVGVEWNVVTYT 312

Query: 373 TLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLE-- 430
            L+ GL  A +   A+KLF +M    V P+L++YN LI G  K   +  A++L + L+  
Sbjct: 313 ALIDGLCDAERMKEAEKLFGKMVTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGR 372

Query: 431 ----------------------------MNKF-EFGIE----IFNCLIDGLCKAGRLDNA 457
                                       MN+  E GI+    I+  L+D   K+G     
Sbjct: 373 GIQPDLLLYGTFIWGLCGLEKIEAAKVVMNEMQENGIKANTLIYTTLMDAYFKSGNPTEG 432

Query: 458 WELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKN-GCAPNVVTFNTLMH 516
             L  ++ +     TVVT+ ++I GLC+   + KA D+   M  + G  PN   +  ++ 
Sbjct: 433 LHLLEEMQELDHEVTVVTFCVLIDGLCKNKLVSKAIDYFGRMSNDFGLQPNAAVYTAMID 492

Query: 517 GFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
           G  + N+      L  +MA  +  LVPD T ++ ++D
Sbjct: 493 GLCKENQVKAATTLFEQMA--QEGLVPDRTAYTSLMD 527



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 85/324 (26%), Positives = 150/324 (46%), Gaps = 47/324 (14%)

Query: 261 PNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREI 320
           P    F+ +   L   G + EA      M +  + P   + N L+  +  +G+ D  +  
Sbjct: 61  PGFGVFDALFSVLIDLGMLEEATQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGVKRF 120

Query: 321 FLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQ 380
           F  M   G K TV +YNI+I+   K  ++E A  L+ ++   G+    +TYN+++ G  +
Sbjct: 121 FKDMIGAGSKPTVFTYNIMIDCMWKEGDIEAARGLFEEMKFRGLIPDTVTYNSMIDGYGK 180

Query: 381 AGQAGYAQKLFDEMKLYNVEPDLSTYN--------------------------------- 407
            G+       F+EMK  + EPD+ TYN                                 
Sbjct: 181 VGRLDDTVYFFEEMKSMSCEPDVITYNSLINCFCKSGKLPKGLEFYREMKQSGLKPNVVS 240

Query: 408 --ILIDGLCKNNCVQEAVKLFHMLEMNKF-----EFGIEIFNCLIDGLCKAGRLDNAWEL 460
              L+D  CK + +Q+A+K +  ++M +      EF    +  L+D  CK G L +A+ L
Sbjct: 241 YSTLVDAFCKEDMMQQAIKFY--VDMRRVGHVPNEF---TYTSLVDANCKIGNLSDAFRL 295

Query: 461 FHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQ 520
            +++ + G+   VVTY+ +I GLC   ++++A      M   G  PN+ ++N L+HGF++
Sbjct: 296 ANEMLEVGVEWNVVTYTALIDGLCDAERMKEAEKLFGKMVTAGVIPNLASYNALIHGFVK 355

Query: 521 NNKTSKVVELLHKMAEPERNLVPD 544
                + +ELL+++    R + PD
Sbjct: 356 AKNMDRALELLNELK--GRGIQPD 377



 Score = 95.9 bits (237), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 75/292 (25%), Positives = 124/292 (42%), Gaps = 37/292 (12%)

Query: 56  LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNI 115
           + EA   FG M      P ++S+N L     K ++ D  +    +L   G+ PD L    
Sbjct: 324 MKEAEKLFGKMVTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIQPDLLLYGT 383

Query: 116 LINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLH 175
            I        GLC   +I+ A  +   M   G++ + + Y TL++ + ++GN +  L L 
Sbjct: 384 FI-------WGLCGLEKIEAAKVVMNEMQENGIKANTLIYTTLMDAYFKSGNPTEGLHLL 436

Query: 176 KKMVSGDYE---------------NGLISKT---------------NIFSYSIIIDSLCK 205
           ++M   D+E               N L+SK                N   Y+ +ID LCK
Sbjct: 437 EEMQELDHEVTVVTFCVLIDGLCKNKLVSKAIDYFGRMSNDFGLQPNAAVYTAMIDGLCK 496

Query: 206 EGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLT 265
           E  V  A  LF +M   G+ P     T+L+ G    GN  E   L  +M ++G + +LL 
Sbjct: 497 ENQVKAATTLFEQMAQEGLVPDRTAYTSLMDGNLKQGNMLEALALRDKMAEIGMKLDLLA 556

Query: 266 FNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTA 317
           +  ++    +  ++ +A   LE MI   + PD      ++  +  +G ID A
Sbjct: 557 YTSLVWGFSQCNQLQKARSFLEEMIGEEILPDEVLCIGVLKKHYELGCIDEA 608



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 56/202 (27%), Positives = 94/202 (46%), Gaps = 16/202 (7%)

Query: 50  KSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVS-IGLLP 108
           KSG  N  E  +    M  +     + +F +L   + KN+     I ++ ++ +  GL P
Sbjct: 425 KSG--NPTEGLHLLEEMQELDHEVTVVTFCVLIDGLCKNKLVSKAIDYFGRMSNDFGLQP 482

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           +      +I+       GLC EN++K AT LF+ M   G+ PD   Y +L++G  + GN+
Sbjct: 483 NAAVYTAMID-------GLCKENQVKAATTLFEQMAQEGLVPDRTAYTSLMDGNLKQGNM 535

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
             AL L  KM     E G+  K ++ +Y+ ++    +   + KA+    EM G  I P  
Sbjct: 536 LEALALRDKMA----EIGM--KLDLLAYTSLVWGFSQCNQLQKARSFLEEMIGEEILPDE 589

Query: 229 VVCTTLIHGFCCAGNWEEVNGL 250
           V+C  ++      G  +E  GL
Sbjct: 590 VLCIGVLKKHYELGCIDEAVGL 611


>gi|302821481|ref|XP_002992403.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
 gi|300139819|gb|EFJ06553.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
          Length = 448

 Score =  246 bits (627), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 141/451 (31%), Positives = 234/451 (51%), Gaps = 35/451 (7%)

Query: 114 NILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALR 173
           N L++ F  K++        +EA  LFKN +     PD ITY TLINGFC+  +   A R
Sbjct: 2   NCLLSAFVRKKKA-------QEAYDLFKNHLCGLCSPDSITYSTLINGFCKARDFQQAYR 54

Query: 174 LHKKM---------------VSGDYENGLISKT-------------NIFSYSIIIDSLCK 205
           L  +M               + G  +NG +                ++ +Y+I++D+LCK
Sbjct: 55  LLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQRHCAPSVITYTILVDALCK 114

Query: 206 EGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLT 265
              +  A  +  +M   G  P VV   TLI+GFC  GN +E   LF +ML+    P++ T
Sbjct: 115 SARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFT 174

Query: 266 FNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMH 325
           +N++ID  CK  +  +   LL+ M++ G  P+  TYN+LMD     G+   A  +   M 
Sbjct: 175 YNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMML 234

Query: 326 SKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAG 385
            + CK +  ++N++I+ +CK+  ++ A  L++ +   G    + TYN ++SG  +A +  
Sbjct: 235 RRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRID 294

Query: 386 YAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLI 445
            A++L + M      PD+ TYN ++ GLCK + V EA +++ +L    +   +   + LI
Sbjct: 295 DARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLI 354

Query: 446 DGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCA 505
           DGLCK+ RLD+A +L  ++ + G  P VV Y+I+IHG C+  +L+K+  F   M   GC 
Sbjct: 355 DGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCV 414

Query: 506 PNVVTFNTLMHGFLQNNKTSKVVELLHKMAE 536
           P V+T++ ++    ++ +      LL  M E
Sbjct: 415 PTVITYSIVIDKLCKSARVRDGCMLLKTMLE 445



 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 134/432 (31%), Positives = 225/432 (52%), Gaps = 14/432 (3%)

Query: 72  SPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVEN 131
           SP   +++ L     K R +        ++   G++P     N +I       +GLC   
Sbjct: 30  SPDSITYSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTII-------KGLCDNG 82

Query: 132 RIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKT 191
           R+  A   +++M      P VITY  L++  C++  +S A  + + M+    E G     
Sbjct: 83  RVDSALVHYRDM-QRHCAPSVITYTILVDALCKSARISDASLILEDMI----EAG--CAP 135

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
           N+ +Y+ +I+  CK G +D+A  LF +M     +P V     LI G+C     ++   L 
Sbjct: 136 NVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLL 195

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
            EM+  G  PN +T+N ++D L K GK  +A  L ++M++R   P  FT+N ++D +C V
Sbjct: 196 QEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKV 255

Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
           G++D A E+F  M  +GC   + +YNI+I+G C+   +++A  L  ++   G    V+TY
Sbjct: 256 GQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTY 315

Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
           N+++SGL +A Q   A ++++ ++      D+ T + LIDGLCK+  + +A KL   +E 
Sbjct: 316 NSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMER 375

Query: 432 NKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEK 491
           N     +  +  LI G CKA +LD +   F ++  KG VPTV+TYSI+I  LC+  ++  
Sbjct: 376 NGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRD 435

Query: 492 ANDFLLYMEKNG 503
               L  M + G
Sbjct: 436 GCMLLKTMLERG 447



 Score =  216 bits (551), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 135/448 (30%), Positives = 226/448 (50%), Gaps = 19/448 (4%)

Query: 23  SLFKSPRQIAAVSSPET-QLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLL 81
            LFK+   +  + SP++   +  ++  CK+   +  +A      M      P  + +N +
Sbjct: 19  DLFKN--HLCGLCSPDSITYSTLINGFCKAR--DFQQAYRLLDEMEKRGIVPHNAVYNTI 74

Query: 82  FGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFK 141
              +  N   D+ +  YR +      P  +T  IL++        LC   RI +A+ + +
Sbjct: 75  IKGLCDNGRVDSALVHYRDMQR-HCAPSVITYTILVD-------ALCKSARISDASLILE 126

Query: 142 NMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIID 201
           +MI  G  P+V+TY TLINGFC+ GN+  A+ L  +M+    EN      ++F+Y+I+ID
Sbjct: 127 DMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQML----ENS--CSPDVFTYNILID 180

Query: 202 SLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRP 261
             CK+       +L  EM   G  P  +   TL+     +G + +   L   ML    +P
Sbjct: 181 GYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKP 240

Query: 262 NLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIF 321
           +  TFN+MID  CK G+++ A  L +LM  RG  PD +TYN ++ G C   RID AR++ 
Sbjct: 241 SHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLL 300

Query: 322 LSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQA 381
             M   GC   VV+YN +++G CK   V+EA  +Y  + + G    V+T +TL+ GL ++
Sbjct: 301 ERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKS 360

Query: 382 GQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIF 441
            +   A+KL  EM+     PD+  Y ILI G CK + + +++  F  +        +  +
Sbjct: 361 RRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITY 420

Query: 442 NCLIDGLCKAGRLDNAWELFHKLPQKGL 469
           + +ID LCK+ R+ +   L   + ++G+
Sbjct: 421 SIVIDKLCKSARVRDGCMLLKTMLERGV 448


>gi|357118714|ref|XP_003561096.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g39710-like [Brachypodium distachyon]
          Length = 718

 Score =  246 bits (627), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 148/453 (32%), Positives = 241/453 (53%), Gaps = 29/453 (6%)

Query: 72  SPPISSFNLLFGAVAKNRHYDAVISFYRKLVSI----GLLPDFLTLNILINCFGNKERGL 127
           +P + ++N +  A++     DA +   R+L++     G+ P+  T NIL+       R L
Sbjct: 117 APSLLAYNAVLLALS-----DASLPSARRLLASMLRDGVAPNVYTYNILV-------RAL 164

Query: 128 CVENRIKEATWLF-KNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENG 186
           C   + +EA  +   +M   G  P+V+TY TL+  FCR G +  A RL   M  G     
Sbjct: 165 CARGQREEALGVVGDDMRGAGCAPNVVTYNTLVAAFCRAGEVDAAERLVGVMREGGVRPS 224

Query: 187 LISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEE 246
           L++      ++ +++ LCK G ++ A+++F EM   G+ P  V   TL+ G+C AG   E
Sbjct: 225 LVT------FNTVVNGLCKAGRMEDARKMFDEMAREGLTPDGVSYNTLVSGYCKAGCLHE 278

Query: 247 VNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMD 306
              +F EM   G  P+++TF  +I  +C+ G +  A  L+  M +RGL  + FT+ +L+D
Sbjct: 279 ALAVFAEMAQKGVVPDVVTFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTALID 338

Query: 307 GYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQ 366
           G+C  G +D A      M     + +VV YN+LINGYCK+  ++EA  L  ++ + G++ 
Sbjct: 339 GFCRNGFLDDALLAMKEMRECRIQPSVVCYNVLINGYCKLGRMDEARELIHEMEAKGMKP 398

Query: 367 TVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLF 426
            V+TY+T+LSG  + G    A +L  +M    V PD  TY+ LI GLC+   + +A +LF
Sbjct: 399 DVVTYSTILSGYCKIGDTDSAFELNRKMLKKGVVPDAITYSSLIRGLCEERRLGDACELF 458

Query: 427 H---MLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGL 483
                L +   EF    +  LIDG CK G +  A  L  ++ +KG++P VVTYS++I GL
Sbjct: 459 EKMLQLGLQPDEF---TYTTLIDGHCKEGNVQKALSLHDEMIKKGVLPDVVTYSVLIDGL 515

Query: 484 CRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMH 516
            +  + ++A   L  +      P+ + +  LMH
Sbjct: 516 SKSARTKEAQRLLFKLYYEDPVPDNIKYEALMH 548



 Score =  236 bits (602), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 156/531 (29%), Positives = 253/531 (47%), Gaps = 64/531 (12%)

Query: 55  NLNEARYFFGYMTHMQPSPPISSFNLLFGAV-AKNRHYDAVISFYRKLVSIGLLPDFLTL 113
           +L  AR     M     +P + ++N+L  A+ A+ +  +A+      +   G  P+ +T 
Sbjct: 134 SLPSARRLLASMLRDGVAPNVYTYNILVRALCARGQREEALGVVGDDMRGAGCAPNVVTY 193

Query: 114 NILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALR 173
           N L+  F       C    +  A  L   M   GVRP ++T+ T++NG C+ G +  A +
Sbjct: 194 NTLVAAF-------CRAGEVDAAERLVGVMREGGVRPSLVTFNTVVNGLCKAGRMEDARK 246

Query: 174 LHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTT 233
           +  +M       GL    +  SY+ ++   CK G + +A  +F EM  +G+ P VV  T+
Sbjct: 247 MFDEMA----REGLTP--DGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVPDVVTFTS 300

Query: 234 LIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRG 293
           LIH  C AGN E    L  +M + G R N  TF  +ID  C+ G +++A   ++ M +  
Sbjct: 301 LIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAMKEMRECR 360

Query: 294 LNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAM 353
           + P    YN L++GYC +GR+D ARE+   M +KG K  VV+Y+ +++GYCKI + + A 
Sbjct: 361 IQPSVVCYNVLINGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCKIGDTDSAF 420

Query: 354 SLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGL 413
            L R+++  GV    ITY++L+ GL +  + G A +LF++M    ++PD  TY  LIDG 
Sbjct: 421 ELNRKMLKKGVVPDAITYSSLIRGLCEERRLGDACELFEKMLQLGLQPDEFTYTTLIDGH 480

Query: 414 CKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVP-- 471
           CK   VQ+A+ L   +        +  ++ LIDGL K+ R   A  L  KL  +  VP  
Sbjct: 481 CKEGNVQKALSLHDEMIKKGVLPDVVTYSVLIDGLSKSARTKEAQRLLFKLYYEDPVPDN 540

Query: 472 ----------------TVVT--------------------------------YSIMIHGL 483
                           +VV                                 YS++IHG 
Sbjct: 541 IKYEALMHCCRTAEFKSVVALLKGFSMKGLMNQADKVYQSMLDRHWKLDGSVYSVLIHGH 600

Query: 484 CRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKM 534
           CR G + KA  F   + + G +PN  +  +L+ G  +   T +   ++ ++
Sbjct: 601 CRGGNIMKALSFHKQLLRCGFSPNSTSTISLVRGLFEEGMTVEADNVIQEL 651



 Score =  228 bits (580), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 131/418 (31%), Positives = 224/418 (53%), Gaps = 10/418 (2%)

Query: 147 GVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKE 206
           G  P ++ Y  ++       +L  A RL   M+     +G+    N+++Y+I++ +LC  
Sbjct: 115 GYAPSLLAYNAVLLAL-SDASLPSARRLLASML----RDGV--APNVYTYNILVRALCAR 167

Query: 207 GLVDKAKELF-LEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLT 265
           G  ++A  +   +M+G G  P VV   TL+  FC AG  +    L   M + G RP+L+T
Sbjct: 168 GQREEALGVVGDDMRGAGCAPNVVTYNTLVAAFCRAGEVDAAERLVGVMREGGVRPSLVT 227

Query: 266 FNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMH 325
           FN +++ LCK G++ +A  + + M + GL PD  +YN+L+ GYC  G +  A  +F  M 
Sbjct: 228 FNTVVNGLCKAGRMEDARKMFDEMAREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMA 287

Query: 326 SKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAG 385
            KG    VV++  LI+  C+  N+E A++L  Q+   G+R    T+  L+ G  + G   
Sbjct: 288 QKGVVPDVVTFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLD 347

Query: 386 YAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLI 445
            A     EM+   ++P +  YN+LI+G CK   + EA +L H +E    +  +  ++ ++
Sbjct: 348 DALLAMKEMRECRIQPSVVCYNVLINGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTIL 407

Query: 446 DGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCA 505
            G CK G  D+A+EL  K+ +KG+VP  +TYS +I GLC + +L  A +    M + G  
Sbjct: 408 SGYCKIGDTDSAFELNRKMLKKGVVPDAITYSSLIRGLCEERRLGDACELFEKMLQLGLQ 467

Query: 506 PNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
           P+  T+ TL+ G  +     K + L  +M   ++ ++PD  T+S+++D L+K  +  E
Sbjct: 468 PDEFTYTTLIDGHCKEGNVQKALSLHDEMI--KKGVLPDVVTYSVLIDGLSKSARTKE 523



 Score =  218 bits (555), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 131/449 (29%), Positives = 230/449 (51%), Gaps = 17/449 (3%)

Query: 105 GLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCR 164
           G  P  L  N ++    +          +  A  L  +M+  GV P+V TY  L+   C 
Sbjct: 115 GYAPSLLAYNAVLLALSDAS--------LPSARRLLASMLRDGVAPNVYTYNILVRALCA 166

Query: 165 TGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGI 224
            G    AL      V GD   G     N+ +Y+ ++ + C+ G VD A+ L   M+  G+
Sbjct: 167 RGQREEALG-----VVGDDMRGAGCAPNVVTYNTLVAAFCRAGEVDAAERLVGVMREGGV 221

Query: 225 NPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANG 284
            P++V   T+++G C AG  E+   +F EM   G  P+ +++N ++   CK G ++EA  
Sbjct: 222 RPSLVTFNTVVNGLCKAGRMEDARKMFDEMAREGLTPDGVSYNTLVSGYCKAGCLHEALA 281

Query: 285 LLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYC 344
           +   M Q+G+ PD  T+ SL+   C  G ++ A  +   M  +G +    ++  LI+G+C
Sbjct: 282 VFAEMAQKGVVPDVVTFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTALIDGFC 341

Query: 345 KILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLS 404
           +   +++A+   +++    ++ +V+ YN L++G  + G+   A++L  EM+   ++PD+ 
Sbjct: 342 RNGFLDDALLAMKEMRECRIQPSVVCYNVLINGYCKLGRMDEARELIHEMEAKGMKPDVV 401

Query: 405 TYNILIDGLCKNNCVQEAVKL-FHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHK 463
           TY+ ++ G CK      A +L   ML+       I  ++ LI GLC+  RL +A ELF K
Sbjct: 402 TYSTILSGYCKIGDTDSAFELNRKMLKKGVVPDAI-TYSSLIRGLCEERRLGDACELFEK 460

Query: 464 LPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNK 523
           + Q GL P   TY+ +I G C++G ++KA      M K G  P+VVT++ L+ G  ++ +
Sbjct: 461 MLQLGLQPDEFTYTTLIDGHCKEGNVQKALSLHDEMIKKGVLPDVVTYSVLIDGLSKSAR 520

Query: 524 TSKVVELLHKMAEPERNLVPDDTTFSIVV 552
           T +   LL K+     + VPD+  +  ++
Sbjct: 521 TKEAQRLLFKLY--YEDPVPDNIKYEALM 547



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 114/394 (28%), Positives = 192/394 (48%), Gaps = 31/394 (7%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CK+G   + +AR  F  M     +P   S+N L     K       ++ + ++   G++P
Sbjct: 236 CKAG--RMEDARKMFDEMAREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVP 293

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           D +T   LI+        +C    ++ A  L   M   G+R +  T+  LI+GFCR G L
Sbjct: 294 DVVTFTSLIH-------AMCRAGNLERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFL 346

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
             AL   K+M     +       ++  Y+++I+  CK G +D+A+EL  EM+ +G+ P V
Sbjct: 347 DDALLAMKEMRECRIQ------PSVVCYNVLINGYCKLGRMDEARELIHEMEAKGMKPDV 400

Query: 229 VVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLEL 288
           V  +T++ G+C  G+ +    L  +ML  G  P+ +T++ +I  LC+  ++ +A  L E 
Sbjct: 401 VTYSTILSGYCKIGDTDSAFELNRKMLKKGVVPDAITYSSLIRGLCEERRLGDACELFEK 460

Query: 289 MIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILN 348
           M+Q GL PD FTY +L+DG+C  G +  A  +   M  KG    VV+Y++LI+G  K   
Sbjct: 461 MLQLGLQPDEFTYTTLIDGHCKEGNVQKALSLHDEMIKKGVLPDVVTYSVLIDGLSKSAR 520

Query: 349 VEEAMSL-----YRQIISNGVRQTVITY----------NTLLSGLFQAGQAGYAQKLFDE 393
            +EA  L     Y   + + ++   + +            LL G    G    A K++  
Sbjct: 521 TKEAQRLLFKLYYEDPVPDNIKYEALMHCCRTAEFKSVVALLKGFSMKGLMNQADKVYQS 580

Query: 394 MKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFH 427
           M   + + D S Y++LI G C+   + +A+  FH
Sbjct: 581 MLDRHWKLDGSVYSVLIHGHCRGGNIMKALS-FH 613



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 119/420 (28%), Positives = 197/420 (46%), Gaps = 38/420 (9%)

Query: 44  FLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVS 103
            +H  C++G  NL  A    G M          +F  L     +N   D  +   +++  
Sbjct: 301 LIHAMCRAG--NLERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAMKEMRE 358

Query: 104 IGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFC 163
             + P  +  N+LIN       G C   R+ EA  L   M A G++PDV+TY T+++G+C
Sbjct: 359 CRIQPSVVCYNVLIN-------GYCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGYC 411

Query: 164 RTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRG 223
           + G+   A  L++KM+    + G++   +  +YS +I  LC+E  +  A ELF +M   G
Sbjct: 412 KIGDTDSAFELNRKML----KKGVVP--DAITYSSLIRGLCEERRLGDACELFEKMLQLG 465

Query: 224 INPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEAN 283
           + P     TTLI G C  GN ++   L  EM+  G  P+++T++V+ID L K  +  EA 
Sbjct: 466 LQPDEFTYTTLIDGHCKEGNVQKALSLHDEMIKKGVLPDVVTYSVLIDGLSKSARTKEAQ 525

Query: 284 GLLELMIQRGLNPDRFTYNSLM---------------DGYCLVGRIDTAREIFLSMHSKG 328
            LL  +      PD   Y +LM                G+ + G ++ A +++ SM  + 
Sbjct: 526 RLLFKLYYEDPVPDNIKYEALMHCCRTAEFKSVVALLKGFSMKGLMNQADKVYQSMLDRH 585

Query: 329 CKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQ 388
            K     Y++LI+G+C+  N+ +A+S ++Q++  G      +  +L+ GLF+ G    A 
Sbjct: 586 WKLDGSVYSVLIHGHCRGGNIMKALSFHKQLLRCGFSPNSTSTISLVRGLFEEGMTVEAD 645

Query: 389 KLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHM---LEMNKFEFGIEIFNCLI 445
            +  E+       D  T   LID    N   +E V  F     L M K    +E +NC++
Sbjct: 646 NVIQELLNCCSLADAETSKALID---LNR--KEGVGYFQAQGELCMQKPALFVEHWNCMM 700


>gi|255541015|ref|XP_002511572.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223550687|gb|EEF52174.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 735

 Score =  246 bits (627), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 164/552 (29%), Positives = 271/552 (49%), Gaps = 23/552 (4%)

Query: 19  VKLSSLFKSPRQIAAVS------SPETQLNEFLHENCKSGIINLN---EARYFFGYMTHM 69
           +++ S  ++ R +AA+       S   +LN  ++    SG    N   EA   F  M  +
Sbjct: 151 IRIKSFCRTKRPLAALRLLNNMPSQGCELNAVVYCTVISGFYEENYQVEAYELFNKMLRL 210

Query: 70  QPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCV 129
              P I++FN L   + K  H         K++  G+ P+  T NI I     K      
Sbjct: 211 GIFPHIATFNKLMHILCKKGHLQEGEKLLNKVLKNGVCPNLFTFNIFIQGLCRKGVLEGA 270

Query: 130 ENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLIS 189
            +++ EA      M+  G+ PD  TY T+I G+ + G +  A R+ K         G + 
Sbjct: 271 NSKVVEAENYLHKMVNKGLEPDDFTYNTIIYGYSKVGKIQDASRILKDAKF----KGFVP 326

Query: 190 KTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNG 249
               F+Y  +I  +C++G +D A  LF E  G+G+ P++V+  TLI G    G   +   
Sbjct: 327 DE--FTYCSLIIGVCQDGDIDHALALFEEALGKGLKPSIVLYNTLIKGLSQQGLVLKALQ 384

Query: 250 LFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYC 309
           L  +M   G  P++ T+N++I+ LCK G +++AN LL   I +G  PD FT+N+L+DGYC
Sbjct: 385 LMNDMSKEGMSPDIWTYNLVINGLCKMGCVSDANNLLNAAIAKGYLPDIFTFNTLIDGYC 444

Query: 310 LVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVI 369
              ++D A  I  SM S G    V++YN ++NG CK    E+ M  ++ I+  G    +I
Sbjct: 445 KRLKMDNAIGILDSMWSHGVTPDVITYNSILNGLCKAAKPEDVMETFKMIMEKGCLPNII 504

Query: 370 TYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHML 429
           TYN L+  L +A +   A  L +E++   + PD  ++  +I G C N  + EA +LF  +
Sbjct: 505 TYNILIESLCKARKVTEALDLLEEIRNRGLIPDPVSFGTVISGFCNNGDLDEAYQLFRRM 564

Query: 430 EMN-KFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGK 488
           E   +    +  +N +I+   +   +D A +LFH++  KG  P   TY +MI G C+ G 
Sbjct: 565 EQQYRICHTVATYNIMINAFSEKLDMDMAQKLFHEMGDKGCDPDSYTYRVMIDGFCKVGN 624

Query: 489 LEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTF 548
           +    DFLL   + G  P++ TF  +++     ++  + V ++H M      +VP+    
Sbjct: 625 VNSGYDFLLKEIEIGFVPSLTTFGRVINCLCVQHRVHEAVGIVHLMVRT--GVVPE---- 678

Query: 549 SIVVDLLAKDEK 560
             VV +   D+K
Sbjct: 679 -AVVTIFDADKK 689



 Score =  240 bits (613), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 153/459 (33%), Positives = 234/459 (50%), Gaps = 22/459 (4%)

Query: 135 EATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIF 194
           +A  ++  M   G+ PDV T+   I  FCRT     ALRL   M S   E       N  
Sbjct: 129 QAHKVYLRMKHEGIAPDVCTFTIRIKSFCRTKRPLAALRLLNNMPSQGCE------LNAV 182

Query: 195 SYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEM 254
            Y  +I    +E    +A ELF +M   GI P +     L+H  C  G+ +E   L  ++
Sbjct: 183 VYCTVISGFYEENYQVEAYELFNKMLRLGIFPHIATFNKLMHILCKKGHLQEGEKLLNKV 242

Query: 255 LDLGPRPNLLTFNVMIDCLCKGG-------KINEANGLLELMIQRGLNPDRFTYNSLMDG 307
           L  G  PNL TFN+ I  LC+ G       K+ EA   L  M+ +GL PD FTYN+++ G
Sbjct: 243 LKNGVCPNLFTFNIFIQGLCRKGVLEGANSKVVEAENYLHKMVNKGLEPDDFTYNTIIYG 302

Query: 308 YCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQT 367
           Y  VG+I  A  I      KG      +Y  LI G C+  +++ A++L+ + +  G++ +
Sbjct: 303 YSKVGKIQDASRILKDAKFKGFVPDEFTYCSLIIGVCQDGDIDHALALFEEALGKGLKPS 362

Query: 368 VITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFH 427
           ++ YNTL+ GL Q G    A +L ++M    + PD+ TYN++I+GLCK  CV +A  L +
Sbjct: 363 IVLYNTLIKGLSQQGLVLKALQLMNDMSKEGMSPDIWTYNLVINGLCKMGCVSDANNLLN 422

Query: 428 MLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKG 487
                 +   I  FN LIDG CK  ++DNA  +   +   G+ P V+TY+ +++GLC+  
Sbjct: 423 AAIAKGYLPDIFTFNTLIDGYCKRLKMDNAIGILDSMWSHGVTPDVITYNSILNGLCKAA 482

Query: 488 KLEKAND-FLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDT 546
           K E   + F + MEK GC PN++T+N L+    +  K ++ ++LL ++    R L+PD  
Sbjct: 483 KPEDVMETFKMIMEK-GCLPNIITYNILIESLCKARKVTEALDLLEEIR--NRGLIPDPV 539

Query: 547 TFSIVVDLLAK----DEKYHECSAVSKSSYRACLYVTIF 581
           +F  V+         DE Y     + +  YR C  V  +
Sbjct: 540 SFGTVISGFCNNGDLDEAYQLFRRMEQ-QYRICHTVATY 577



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 141/477 (29%), Positives = 239/477 (50%), Gaps = 17/477 (3%)

Query: 96  SFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITY 155
             + K++ +G+ P   T N L++        LC +  ++E   L   ++  GV P++ T+
Sbjct: 202 ELFNKMLRLGIFPHIATFNKLMHI-------LCKKGHLQEGEKLLNKVLKNGVCPNLFTF 254

Query: 156 GTLINGFCRTGNLSVALRLHKKMVSGD-YENGLISK---TNIFSYSIIIDSLCKEGLVDK 211
              I G CR G L  A   + K+V  + Y + +++K    + F+Y+ II    K G +  
Sbjct: 255 NIFIQGLCRKGVLEGA---NSKVVEAENYLHKMVNKGLEPDDFTYNTIIYGYSKVGKIQD 311

Query: 212 AKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMID 271
           A  +  + K +G  P      +LI G C  G+ +    LF E L  G +P+++ +N +I 
Sbjct: 312 ASRILKDAKFKGFVPDEFTYCSLIIGVCQDGDIDHALALFEEALGKGLKPSIVLYNTLIK 371

Query: 272 CLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKH 331
            L + G + +A  L+  M + G++PD +TYN +++G C +G +  A  +  +  +KG   
Sbjct: 372 GLSQQGLVLKALQLMNDMSKEGMSPDIWTYNLVINGLCKMGCVSDANNLLNAAIAKGYLP 431

Query: 332 TVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLF 391
            + ++N LI+GYCK L ++ A+ +   + S+GV   VITYN++L+GL +A +     + F
Sbjct: 432 DIFTFNTLIDGYCKRLKMDNAIGILDSMWSHGVTPDVITYNSILNGLCKAAKPEDVMETF 491

Query: 392 DEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKA 451
             +      P++ TYNILI+ LCK   V EA+ L   +           F  +I G C  
Sbjct: 492 KMIMEKGCLPNIITYNILIESLCKARKVTEALDLLEEIRNRGLIPDPVSFGTVISGFCNN 551

Query: 452 GRLDNAWELFHKLPQK-GLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVT 510
           G LD A++LF ++ Q+  +  TV TY+IMI+    K  ++ A      M   GC P+  T
Sbjct: 552 GDLDEAYQLFRRMEQQYRICHTVATYNIMINAFSEKLDMDMAQKLFHEMGDKGCDPDSYT 611

Query: 511 FNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAV 567
           +  ++ GF +    +   + L K  E E   VP  TTF  V++ L    + HE   +
Sbjct: 612 YRVMIDGFCKVGNVNSGYDFLLK--EIEIGFVPSLTTFGRVINCLCVQHRVHEAVGI 666



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 99/382 (25%), Positives = 181/382 (47%), Gaps = 12/382 (3%)

Query: 184 ENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVV-VCTTLIHGFCCAG 242
           E+G   K    +Y  +I+ L   G  D  + + +EM+    N  +  V  + +  +   G
Sbjct: 33  EDGF--KHTFLTYKRMIEKLGFHGEFDAMERVLMEMRLNVDNSLLEGVYVSAMRNYGRKG 90

Query: 243 NWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYN 302
             +E   +F  M      P++ ++N +++ L + G  N+A+ +   M   G+ PD  T+ 
Sbjct: 91  KVQEAVDVFERMDFYNCEPSIFSYNAIMNILVEYGYFNQAHKVYLRMKHEGIAPDVCTFT 150

Query: 303 SLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISN 362
             +  +C   R   A  +  +M S+GC+   V Y  +I+G+ +     EA  L+ +++  
Sbjct: 151 IRIKSFCRTKRPLAALRLLNNMPSQGCELNAVVYCTVISGFYEENYQVEAYELFNKMLRL 210

Query: 363 GVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCK------- 415
           G+   + T+N L+  L + G     +KL +++    V P+L T+NI I GLC+       
Sbjct: 211 GIFPHIATFNKLMHILCKKGHLQEGEKLLNKVLKNGVCPNLFTFNIFIQGLCRKGVLEGA 270

Query: 416 NNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVT 475
           N+ V EA    H +     E     +N +I G  K G++ +A  +      KG VP   T
Sbjct: 271 NSKVVEAENYLHKMVNKGLEPDDFTYNTIIYGYSKVGKIQDASRILKDAKFKGFVPDEFT 330

Query: 476 YSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMA 535
           Y  +I G+C+ G ++ A          G  P++V +NTL+ G  Q     K ++L++ M+
Sbjct: 331 YCSLIIGVCQDGDIDHALALFEEALGKGLKPSIVLYNTLIKGLSQQGLVLKALQLMNDMS 390

Query: 536 EPERNLVPDDTTFSIVVDLLAK 557
             +  + PD  T+++V++ L K
Sbjct: 391 --KEGMSPDIWTYNLVINGLCK 410



 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 72/290 (24%), Positives = 137/290 (47%), Gaps = 12/290 (4%)

Query: 291 QRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVS--YNILINGYCKILN 348
           + G      TY  +++     G  D    + + M      ++++   Y   +  Y +   
Sbjct: 33  EDGFKHTFLTYKRMIEKLGFHGEFDAMERVLMEMRL-NVDNSLLEGVYVSAMRNYGRKGK 91

Query: 349 VEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNI 408
           V+EA+ ++ ++       ++ +YN +++ L + G    A K++  MK   + PD+ T+ I
Sbjct: 92  VQEAVDVFERMDFYNCEPSIFSYNAIMNILVEYGYFNQAHKVYLRMKHEGIAPDVCTFTI 151

Query: 409 LIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKG 468
            I   C+      A++L + +     E    ++  +I G  +      A+ELF+K+ + G
Sbjct: 152 RIKSFCRTKRPLAALRLLNNMPSQGCELNAVVYCTVISGFYEENYQVEAYELFNKMLRLG 211

Query: 469 LVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQN----NKT 524
           + P + T++ ++H LC+KG L++    L  + KNG  PN+ TFN  + G  +        
Sbjct: 212 IFPHIATFNKLMHILCKKGHLQEGEKLLNKVLKNGVCPNLFTFNIFIQGLCRKGVLEGAN 271

Query: 525 SKVVE---LLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKSS 571
           SKVVE    LHKM    + L PDD T++ ++   +K  K  + S + K +
Sbjct: 272 SKVVEAENYLHKMV--NKGLEPDDFTYNTIIYGYSKVGKIQDASRILKDA 319


>gi|334184106|ref|NP_178323.3| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|218546751|sp|P0C894.1|PP143_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At2g02150
 gi|330250459|gb|AEC05553.1| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 761

 Score =  245 bits (626), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 152/503 (30%), Positives = 257/503 (51%), Gaps = 23/503 (4%)

Query: 37  PETQ-LNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVI 95
           P+T+  N  LH   K G    ++ + FF  M      P + ++N++   + K    +A  
Sbjct: 225 PKTRSCNGLLHRFAKLG--KTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAAR 282

Query: 96  SFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITY 155
             + ++   GL+PD +T N +I+ FG          R+ +    F+ M      PDVITY
Sbjct: 283 GLFEEMKFRGLVPDTVTYNSMIDGFGKV-------GRLDDTVCFFEEMKDMCCEPDVITY 335

Query: 156 GTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKEL 215
             LIN FC+ G L + L  +++M      NGL  K N+ SYS ++D+ CKEG++ +A + 
Sbjct: 336 NALINCFCKFGKLPIGLEFYREMKG----NGL--KPNVVSYSTLVDAFCKEGMMQQAIKF 389

Query: 216 FLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCK 275
           +++M+  G+ P     T+LI   C  GN  +   L  EML +G   N++T+  +ID LC 
Sbjct: 390 YVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCD 449

Query: 276 GGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVS 335
             ++ EA  L   M   G+ P+  +YN+L+ G+     +D A E+   +  +G K  ++ 
Sbjct: 450 AERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLL 509

Query: 336 YNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMK 395
           Y   I G C +  +E A  +  ++   G++   + Y TL+   F++G       L DEMK
Sbjct: 510 YGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMK 569

Query: 396 LYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIE----IFNCLIDGLCKA 451
             ++E  + T+ +LIDGLCKN  V +AV  F+ +     +FG++    IF  +IDGLCK 
Sbjct: 570 ELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISN---DFGLQANAAIFTAMIDGLCKD 626

Query: 452 GRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTF 511
            +++ A  LF ++ QKGLVP    Y+ ++ G  ++G + +A      M + G   +++ +
Sbjct: 627 NQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAY 686

Query: 512 NTLMHGFLQNNKTSKVVELLHKM 534
            +L+ G    N+  K    L +M
Sbjct: 687 TSLVWGLSHCNQLQKARSFLEEM 709



 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 111/341 (32%), Positives = 187/341 (54%), Gaps = 4/341 (1%)

Query: 196 YSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEML 255
           +S++ID     G++++A + F +MK   + P    C  L+H F   G  ++V   F +M+
Sbjct: 199 FSVLIDL----GMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMI 254

Query: 256 DLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRID 315
             G RP + T+N+MIDC+CK G +  A GL E M  RGL PD  TYNS++DG+  VGR+D
Sbjct: 255 GAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLD 314

Query: 316 TAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLL 375
                F  M    C+  V++YN LIN +CK   +   +  YR++  NG++  V++Y+TL+
Sbjct: 315 DTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLV 374

Query: 376 SGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFE 435
               + G    A K + +M+   + P+  TY  LID  CK   + +A +L + +     E
Sbjct: 375 DAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVE 434

Query: 436 FGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDF 495
           + +  +  LIDGLC A R+  A ELF K+   G++P + +Y+ +IHG  +   +++A + 
Sbjct: 435 WNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALEL 494

Query: 496 LLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAE 536
           L  ++  G  P+++ + T + G     K      ++++M E
Sbjct: 495 LNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKE 535



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 132/457 (28%), Positives = 221/457 (48%), Gaps = 44/457 (9%)

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
           ++EA   F  M  F V P   +   L++ F + G      R  K M+      G  ++  
Sbjct: 208 LEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMI------GAGARPT 261

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
           +F+Y+I+ID +CKEG V+ A+ LF EMK RG+ P  V   ++I GF   G  ++    F 
Sbjct: 262 VFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFE 321

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
           EM D+   P+++T+N +I+C CK GK+         M   GL P+  +Y++L+D +C  G
Sbjct: 322 EMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEG 381

Query: 313 RIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYN 372
            +  A + ++ M   G      +Y  LI+  CKI N+ +A  L  +++  GV   V+TY 
Sbjct: 382 MMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYT 441

Query: 373 TLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLE-- 430
            L+ GL  A +   A++LF +M    V P+L++YN LI G  K   +  A++L + L+  
Sbjct: 442 ALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGR 501

Query: 431 ----------------------------MNKF-EFGIE----IFNCLIDGLCKAGRLDNA 457
                                       MN+  E GI+    I+  L+D   K+G     
Sbjct: 502 GIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEG 561

Query: 458 WELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKN-GCAPNVVTFNTLMH 516
             L  ++ +  +  TVVT+ ++I GLC+   + KA D+   +  + G   N   F  ++ 
Sbjct: 562 LHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMID 621

Query: 517 GFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
           G  ++N+      L  +M   ++ LVPD T ++ ++D
Sbjct: 622 GLCKDNQVEAATTLFEQMV--QKGLVPDRTAYTSLMD 656



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 92/350 (26%), Positives = 157/350 (44%), Gaps = 38/350 (10%)

Query: 261 PNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREI 320
           P    F+ +   L   G + EA      M +  + P   + N L+  +  +G+ D  +  
Sbjct: 190 PGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRF 249

Query: 321 FLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQ 380
           F  M   G + TV +YNI+I+  CK  +VE A  L+ ++   G+    +TYN+++ G  +
Sbjct: 250 FKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGK 309

Query: 381 AGQAGYAQKLFDEMKLYNVEPDLSTYNILI------------------------------ 410
            G+       F+EMK    EPD+ TYN LI                              
Sbjct: 310 VGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVS 369

Query: 411 -----DGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLP 465
                D  CK   +Q+A+K +  +           +  LID  CK G L +A+ L +++ 
Sbjct: 370 YSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEML 429

Query: 466 QKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTS 525
           Q G+   VVTY+ +I GLC   ++++A +    M+  G  PN+ ++N L+HGF++     
Sbjct: 430 QVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMD 489

Query: 526 KVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKSSYRAC 575
           + +ELL+++    R + PD   +   +  L   EK  E + V  +  + C
Sbjct: 490 RALELLNEL--KGRGIKPDLLLYGTFIWGLCSLEKI-EAAKVVMNEMKEC 536



 Score =  129 bits (323), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 109/435 (25%), Positives = 186/435 (42%), Gaps = 72/435 (16%)

Query: 56  LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNI 115
           L++   FF  M  M   P + ++N L     K       + FYR++   GL P+ ++ + 
Sbjct: 313 LDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYST 372

Query: 116 LINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLH 175
           L++ F       C E  +++A   + +M   G+ P+  TY +LI+  C+ GNLS A RL 
Sbjct: 373 LVDAF-------CKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLG 425

Query: 176 KKMVSGDYENGLISKT-----------------------------NIFSYSIIIDSLCKE 206
            +M+    E  +++ T                             N+ SY+ +I    K 
Sbjct: 426 NEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKA 485

Query: 207 GLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCC-------------------------- 240
             +D+A EL  E+KGRGI P +++  T I G C                           
Sbjct: 486 KNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIY 545

Query: 241 ---------AGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQ 291
                    +GN  E   L  EM +L     ++TF V+ID LCK   +++A      +  
Sbjct: 546 TTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISN 605

Query: 292 R-GLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVE 350
             GL  +   + +++DG C   +++ A  +F  M  KG      +Y  L++G  K  NV 
Sbjct: 606 DFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVL 665

Query: 351 EAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILI 410
           EA++L  ++   G++  ++ Y +L+ GL    Q   A+   +EM    + PD      ++
Sbjct: 666 EALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVL 725

Query: 411 DGLCKNNCVQEAVKL 425
               +  C+ EAV+L
Sbjct: 726 KKHYELGCIDEAVEL 740


>gi|116309556|emb|CAH66618.1| OSIGBa0144C23.4 [Oryza sativa Indica Group]
          Length = 845

 Score =  245 bits (626), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 160/564 (28%), Positives = 273/564 (48%), Gaps = 56/564 (9%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CKS    +++A      M      P   ++N L    + +  ++  +  ++++ S G++P
Sbjct: 291 CKSKA--MDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIP 348

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGT----------- 157
                N  I+        L    R  EA  +F +M+  G +PD+I+Y T           
Sbjct: 349 TVDNCNSFIH-------ALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTNASWVCYWYVT 401

Query: 158 ---------------------------LINGFCRTGNLSVALRLHKKMVSGDYENGLISK 190
                                      LIN + R G +  A+ + + M +     G+I  
Sbjct: 402 VVWVMWHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQN----KGMIPD 457

Query: 191 TNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGL 250
           T   +++ +I SLC+ G +D A   F  M   G+ P+  V   LI G C  G   +   L
Sbjct: 458 T--VTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKEL 515

Query: 251 FIEMLDLG-PRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYC 309
             EM++   P P +  F+ +I+ LCK G++ E   ++++M+Q G  P+  T+NSLM+GYC
Sbjct: 516 ISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYC 575

Query: 310 LVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVI 369
           LVG ++ A  +  +M S G +     Y  L++GYCK   +++A++++R ++  GV+ T +
Sbjct: 576 LVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSV 635

Query: 370 TYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHML 429
            Y+ +L GLFQA +   A+K+F EM        + TY +++ GLC+NNC  EA  L   L
Sbjct: 636 LYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKL 695

Query: 430 EMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKL 489
                +F I  FN +I  + K GR   A ELF  +   GLVP + TYS+MI  L ++   
Sbjct: 696 FAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESY 755

Query: 490 EKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFS 549
           E+A++  + +EK+G A +    N ++   L   + +K    L  +   E NL  + +T S
Sbjct: 756 EEADNLFISVEKSGHASDSRLLNHIVRMLLNKAEVAKASNYLSIIG--ENNLTLEASTIS 813

Query: 550 IVVDLLAKDEKYHECSAVSKSSYR 573
           ++  L +++ KY E   +  + Y+
Sbjct: 814 LLASLFSREGKYREHIKLLPAKYQ 837



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 138/512 (26%), Positives = 248/512 (48%), Gaps = 19/512 (3%)

Query: 56  LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNI 115
           +++A   F  M      P I   N +   + K +  D   S  +K+V  G+ PD  T ++
Sbjct: 226 VDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSL 285

Query: 116 LINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLH 175
           +I+       GLC    + +A  + + M+  G RP+ ITY +LI+G+  +G  + ++R+ 
Sbjct: 286 IID-------GLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVF 338

Query: 176 KKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLI 235
           K+M S     G+I   +  + +  I +L K G  ++AK +F  M  +G  P ++  +T  
Sbjct: 339 KQMSSC----GVIPTVD--NCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTNA 392

Query: 236 HGFC---CAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQR 292
              C       W   + +F  ML  G  PN   FN++I+   + G +++A  + E M  +
Sbjct: 393 SWVCYWYVTVVWVMWHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNK 452

Query: 293 GLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEA 352
           G+ PD  T+ +++   C +GR+D A   F  M   G   +   Y  LI G C    + +A
Sbjct: 453 GMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKA 512

Query: 353 MSLYRQIISNGVRQTVITY-NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILID 411
             L  ++++  +    + Y +++++ L + G+    + + D M      P++ T+N L++
Sbjct: 513 KELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLME 572

Query: 412 GLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVP 471
           G C    ++EA  L   +     E    I+  L+DG CK GR+D+A  +F  +  KG+ P
Sbjct: 573 GYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKP 632

Query: 472 TVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELL 531
           T V YSI++HGL +  +   A      M ++G   ++ T+  ++ G  +NN T +   LL
Sbjct: 633 TSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLL 692

Query: 532 HKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
            K+     N+  D  TF+IV+  + K  +  E
Sbjct: 693 EKLF--AMNVKFDIITFNIVISAMFKVGRRQE 722



 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 125/505 (24%), Positives = 229/505 (45%), Gaps = 54/505 (10%)

Query: 72  SPP-ISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVE 130
           SPP I ++N+L     +    D  ++   +L+  GL PD  + +++         G   +
Sbjct: 172 SPPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYSLIY--------GFVKD 223

Query: 131 NRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISK 190
             + +A  LF  M+  GV P ++   ++I   C+   +  A  + +KMV    ++G+   
Sbjct: 224 GEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMV----DSGI--A 277

Query: 191 TNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGL 250
            ++F+YS+IID LCK   +DKA+ +  +M   G  P  +   +LIHG+  +G W E   +
Sbjct: 278 PDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRV 337

Query: 251 FIEMLDLGPRPNLLTFNVMIDCLCKGGKINEA---------------------------- 282
           F +M   G  P +   N  I  L K G+ NEA                            
Sbjct: 338 FKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTNASWVCY 397

Query: 283 ----------NGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHT 332
                     + +  LM+ +G+ P++  +N L++ Y   G +D A  IF  M +KG    
Sbjct: 398 WYVTVVWVMWHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPD 457

Query: 333 VVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFD 392
            V++  +I+  C+I  +++A+  +  ++  GV  +   Y  L+ G    G+   A++L  
Sbjct: 458 TVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELIS 517

Query: 393 EMKLYNVEPD-LSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKA 451
           EM   ++ P  +  ++ +I+ LCK   V E   +  M+        +  FN L++G C  
Sbjct: 518 EMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLV 577

Query: 452 GRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTF 511
           G ++ A+ L   +   G+ P    Y  ++ G C+ G+++ A      M   G  P  V +
Sbjct: 578 GNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLY 637

Query: 512 NTLMHGFLQNNKTSKVVELLHKMAE 536
           + ++HG  Q  +T+   ++ H+M E
Sbjct: 638 SIILHGLFQARRTTAAKKMFHEMIE 662



 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 104/379 (27%), Positives = 189/379 (49%), Gaps = 7/379 (1%)

Query: 189 SKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVN 248
           S   I +Y+I+ID   +    D    +   +   G+ P      +LI+GF   G  ++ +
Sbjct: 172 SPPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDF-SYSLIYGFVKDGEVDKAH 230

Query: 249 GLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGY 308
            LF+EM++ G  P +L  N +I  LCK  ++++A  +++ M+  G+ PD FTY+ ++DG 
Sbjct: 231 CLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGL 290

Query: 309 CLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTV 368
           C    +D A  +   M   G +   ++YN LI+GY       E++ +++Q+ S GV  TV
Sbjct: 291 CKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTV 350

Query: 369 ITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAV---KL 425
              N+ +  LF+ G+   A+ +FD M L   +PD+ +Y+     +C        V    +
Sbjct: 351 DNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTNASWVCYWYVTVVWVMWHNI 410

Query: 426 FHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCR 485
           F+++          +FN LI+   + G +D A  +F  +  KG++P  VT++ +I  LCR
Sbjct: 411 FNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCR 470

Query: 486 KGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDD 545
            G+L+ A     +M   G  P+   +  L+ G   + +  K  EL+ +M    +++ P  
Sbjct: 471 IGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMM--NKDIPPPG 528

Query: 546 TT-FSIVVDLLAKDEKYHE 563
              FS +++ L K+ +  E
Sbjct: 529 VKYFSSIINNLCKEGRVAE 547



 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 41/168 (24%), Positives = 78/168 (46%), Gaps = 9/168 (5%)

Query: 438 IEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLL 497
           I  +N LID   +  R D    +  +L + GL P   +YS +I+G  + G+++KA+   L
Sbjct: 176 IHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYS-LIYGFVKDGEVDKAHCLFL 234

Query: 498 YMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAK 557
            M + G  P ++  N+++    +  +  K   ++ KM +    + PD  T+S+++D L K
Sbjct: 235 EMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVD--SGIAPDLFTYSLIIDGLCK 292

Query: 558 DEKYHECSAVSKSSYRA------CLYVTIFQPSSLGSMIGCTVRLMPQ 599
            +   +   V +    A        Y ++    S+  M   +VR+  Q
Sbjct: 293 SKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQ 340


>gi|298204849|emb|CBI34156.3| unnamed protein product [Vitis vinifera]
          Length = 442

 Score =  245 bits (626), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 144/408 (35%), Positives = 222/408 (54%), Gaps = 47/408 (11%)

Query: 56  LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNI 115
           L++A   F  + HM P P I  F  L  ++AK +HY  V+S   ++ S G+ P+  TLNI
Sbjct: 26  LDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNI 85

Query: 116 LINCF-------------------GNKE---------RGLCVENRIKEATWLFKNMIAFG 147
           LIN F                   G++          RGLCVE +I EA  LF  MI  G
Sbjct: 86  LINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEG 145

Query: 148 VRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEG 207
            +P+V+TYGTLING C+ GN S A+RL + M  G+       + ++  Y+ IIDSLCK+ 
Sbjct: 146 FQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGN------CQPDVVIYTSIIDSLCKDR 199

Query: 208 LVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFN 267
            V +A  LF +M G+GI+P +   T+L+H  C    W+ V  L  +M++    P+++ F+
Sbjct: 200 QVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFS 259

Query: 268 VMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSK 327
            ++D LCK GK+ EA+ ++++MIQRG+ PD  TY +LMDG+CL   +D A ++F  M  K
Sbjct: 260 TVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRK 319

Query: 328 GCKHTVVSYNILINGYCK----ILNVEEAMSLYRQIIS--NGVRQTVITYNTLLSGLFQA 381
           G    V+SY  LIN   K    +++++E + L ++      G    VI  + +   LF+ 
Sbjct: 320 GFAPDVISYTTLINAGKKDGGGLVSLQEVIGLVKETPDAVKGGAVEVIRKDKM--KLFEK 377

Query: 382 GQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHML 429
           G+      L +EM    + P++  ++ ++D LCK   V EA  +  M+
Sbjct: 378 GRT-----LLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMM 420



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 109/419 (26%), Positives = 192/419 (45%), Gaps = 41/419 (9%)

Query: 131 NRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISK 190
           N + +A   F  ++     P ++ +  L+    +  + S  L L  +M      +     
Sbjct: 24  NTLDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQM------DSFGVP 77

Query: 191 TNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGL 250
            N+++ +I+I+S C    V  A  +  ++   G  P     TTLI G C  G   E   L
Sbjct: 78  PNVYTLNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHL 137

Query: 251 FIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCL 310
           F +M+D G +PN++T+  +I+ LCK G  + A  LL  M Q    PD   Y S++D  C 
Sbjct: 138 FDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCK 197

Query: 311 VGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVIT 370
             ++  A  +F  M  +G    + +Y  L++  C +   +   +L  Q++++ +   V+ 
Sbjct: 198 DRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVI 257

Query: 371 YNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLE 430
           ++T++  L + G+   A ++ D M    VEPD+ TY  L+DG C  + + EAVK+F M+ 
Sbjct: 258 FSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMV 317

Query: 431 MNKFEFGIEIFNCLIDG-----------------------LCKAGRLDNAWELFHKLPQK 467
              F   +  +  LI+                          K G ++   +   KL +K
Sbjct: 318 RKGFAPDVISYTTLINAGKKDGGGLVSLQEVIGLVKETPDAVKGGAVEVIRKDKMKLFEK 377

Query: 468 G-----------LVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVV-TFNTL 514
           G           ++P VV +S ++  LC++GK+ +A+D +  M K G  PN V  F+T+
Sbjct: 378 GRTLLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNAVKVFDTM 436



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 84/292 (28%), Positives = 151/292 (51%)

Query: 226 PAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGL 285
           P++V    L+       ++  V  L  +M   G  PN+ T N++I+  C   ++  A  +
Sbjct: 43  PSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSV 102

Query: 286 LELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCK 345
           L  +++ G  PD  T+ +L+ G C+ G+I  A  +F  M  +G +  VV+Y  LING CK
Sbjct: 103 LAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCK 162

Query: 346 ILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLST 405
           + N   A+ L R +     +  V+ Y +++  L +  Q   A  LF +M    + PD+ T
Sbjct: 163 VGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFT 222

Query: 406 YNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLP 465
           Y  L+  LC     +    L + +  +K    + IF+ ++D LCK G++  A E+   + 
Sbjct: 223 YTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMI 282

Query: 466 QKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHG 517
           Q+G+ P VVTY+ ++ G C + ++++A      M + G AP+V+++ TL++ 
Sbjct: 283 QRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINA 334



 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 81/308 (26%), Positives = 153/308 (49%), Gaps = 2/308 (0%)

Query: 251 FIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCL 310
           F  +L + P P+++ F  ++  + K    +    L   M   G+ P+ +T N L++ +C 
Sbjct: 33  FNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCH 92

Query: 311 VGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVIT 370
           + R+  A  +   +   G +    ++  LI G C    + EA+ L+ ++I  G +  V+T
Sbjct: 93  LNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVT 152

Query: 371 YNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLE 430
           Y TL++GL + G    A +L   M+  N +PD+  Y  +ID LCK+  V EA  LF  + 
Sbjct: 153 YGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMV 212

Query: 431 MNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLE 490
                  I  +  L+  LC      +   L +++    ++P VV +S ++  LC++GK+ 
Sbjct: 213 GQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVT 272

Query: 491 KANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSI 550
           +A++ +  M + G  P+VVT+ TLM G    ++  + V++   M    +   PD  +++ 
Sbjct: 273 EAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMV--RKGFAPDVISYTT 330

Query: 551 VVDLLAKD 558
           +++   KD
Sbjct: 331 LINAGKKD 338



 Score =  108 bits (271), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 75/277 (27%), Positives = 126/277 (45%), Gaps = 12/277 (4%)

Query: 291 QRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVE 350
           Q   +     +N+L D      R+       L MH      ++V +  L+    K+ +  
Sbjct: 13  QNNFHSKSLHFNTLDDALSSFNRL-------LHMHPPP---SIVDFAKLLTSIAKMKHYS 62

Query: 351 EAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILI 410
             +SL  Q+ S GV   V T N L++      + G+A  +  ++     +PD +T+  LI
Sbjct: 63  TVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLI 122

Query: 411 DGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLV 470
            GLC    + EA+ LF  +    F+  +  +  LI+GLCK G    A  L   + Q    
Sbjct: 123 RGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQ 182

Query: 471 PTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVEL 530
           P VV Y+ +I  LC+  ++ +A +    M   G +P++ T+ +L+H      +   V  L
Sbjct: 183 PDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTL 242

Query: 531 LHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAV 567
           L++M   +  ++PD   FS VVD L K+ K  E   +
Sbjct: 243 LNQMVNSK--ILPDVVIFSTVVDALCKEGKVTEAHEI 277



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 68/283 (24%), Positives = 126/283 (44%), Gaps = 49/283 (17%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CK G  N + A      M      P +  +  +  ++ K+R      + + ++V  G+ P
Sbjct: 161 CKVG--NTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISP 218

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           D  T   L++   N    LC     K  T L   M+   + PDV+ + T+++  C+ G +
Sbjct: 219 DIFTYTSLVHALCN----LC---EWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKV 271

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
           + A  +   M+    E       ++ +Y+ ++D  C +  +D+A ++F  M  +G  P V
Sbjct: 272 TEAHEIVDMMIQRGVE------PDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDV 325

Query: 229 VVCTTLIHGFCCAG----NWEEVNGL------------------------------FIEM 254
           +  TTLI+     G    + +EV GL                                EM
Sbjct: 326 ISYTTLINAGKKDGGGLVSLQEVIGLVKETPDAVKGGAVEVIRKDKMKLFEKGRTLLNEM 385

Query: 255 LDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPD 297
           ++    PN++ F+ ++D LCK GK+ EA+ ++++MI+RG+ P+
Sbjct: 386 VNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPN 428



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 59/255 (23%), Positives = 104/255 (40%), Gaps = 47/255 (18%)

Query: 55  NLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLN 114
            + EA   F  M     SP I ++  L  A+     +  V +   ++V+  +LPD +  +
Sbjct: 200 QVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFS 259

Query: 115 ILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRL 174
            +++        LC E ++ EA  +   MI  GV PDV+TY TL++G C    +  A+++
Sbjct: 260 TVVD-------ALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKV 312

Query: 175 HKKMVSGDYENGLISKTNIFSYSIIIDSLCKEG--------------------------- 207
              MV   +        ++ SY+ +I++  K+G                           
Sbjct: 313 FDMMVRKGF------APDVISYTTLINAGKKDGGGLVSLQEVIGLVKETPDAVKGGAVEV 366

Query: 208 -------LVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPR 260
                  L +K + L  EM    I P VV+ +T++   C  G   E + +   M+  G  
Sbjct: 367 IRKDKMKLFEKGRTLLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVE 426

Query: 261 PNLLTFNVMIDCLCK 275
           PN +     + C+ K
Sbjct: 427 PNAVKVFDTMKCVEK 441


>gi|414871539|tpg|DAA50096.1| TPA: ATP binding protein [Zea mays]
          Length = 692

 Score =  245 bits (626), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 141/460 (30%), Positives = 231/460 (50%), Gaps = 13/460 (2%)

Query: 75  ISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIK 134
           + + NL+  A+      D  +   R L S G  PD ++ N ++       +GLC+  R  
Sbjct: 229 VGNCNLVLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVL-------KGLCMAKRWG 281

Query: 135 EATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIF 194
               L + M+     P+++T+ TLI+  CR G       +  +MV    E+G     +I 
Sbjct: 282 CVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMV----EHG--CTPDIR 335

Query: 195 SYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEM 254
            Y+ IID +CKEG ++ A E+   M   G+ P VV   TL+ G C A  WEE   L  EM
Sbjct: 336 MYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEM 395

Query: 255 LDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRI 314
            D     + +TFN+++D  C+ G ++    LLE M++ G  PD  TY ++++G+C  G I
Sbjct: 396 FDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLI 455

Query: 315 DTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTL 374
           D A  +  SM + GCK   +SY I++ G C      +A  L  Q+I  G     IT+NTL
Sbjct: 456 DEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTL 515

Query: 375 LSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKF 434
           ++ L + G    A +L  +M +    PDL +Y+ +IDGL K     EA++L +++     
Sbjct: 516 INFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGM 575

Query: 435 EFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKAND 494
                I++ +   L + GR++   ++F  +    +    V Y+ +I  LC++G+ E+A +
Sbjct: 576 SPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIE 635

Query: 495 FLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKM 534
           FL YM  +GC PN  T+  L+ G        +  E+L ++
Sbjct: 636 FLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEMLTEL 675



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 126/472 (26%), Positives = 210/472 (44%), Gaps = 51/472 (10%)

Query: 125 RGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALR----LHKKMVS 180
           R LC   RI +A  +   M   G  P    Y  ++   CR G    A+R    LH +  +
Sbjct: 167 RALCARGRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCA 226

Query: 181 GDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCC 240
            D  N           +++++++C +G VD+A  L  ++   G  P VV    ++ G C 
Sbjct: 227 LDVGN----------CNLVLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGLCM 276

Query: 241 AGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFT 300
           A  W  V  L  EM+ +   PN++TFN +I  LC+ G     + +L  M++ G  PD   
Sbjct: 277 AKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRM 336

Query: 301 YNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQII 360
           Y +++DG C  G ++ A EI   M S G K  VV YN L+ G C     EE   L  ++ 
Sbjct: 337 YATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMF 396

Query: 361 SNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQ 420
                   +T+N L+    Q G      +L ++M  +   PD+ TY  +I+G CK   + 
Sbjct: 397 DKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLID 456

Query: 421 EAVKLFHML-----EMNKFEFGIEI------------------------------FNCLI 445
           EAV L   +     + N   + I +                              FN LI
Sbjct: 457 EAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLI 516

Query: 446 DGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCA 505
           + LCK G ++ A EL  ++   G  P +++YS +I GL + GK ++A + L  M   G +
Sbjct: 517 NFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMS 576

Query: 506 PNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAK 557
           PN + ++++     +  + +KV+++   +   +  +  D   ++ V+  L K
Sbjct: 577 PNTIIYSSIASALSREGRINKVIQMFDNIQ--DTTIRSDAVLYNAVISSLCK 626



 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 103/338 (30%), Positives = 174/338 (51%), Gaps = 5/338 (1%)

Query: 233 TLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQR 292
            ++ G+C AG  E    L      +   PN  T+  ++  LC  G+I +A  +L+ M +R
Sbjct: 132 AMVAGYCRAGQLESARRLAAA---VPVPPNAYTYFPVVRALCARGRIADALAVLDEMPRR 188

Query: 293 GLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEA 352
           G  P    Y+ +++  C  G   +A  +   +H++GC   V + N+++N  C   +V+EA
Sbjct: 189 GCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDEA 248

Query: 353 MSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDG 412
           + L R + S G    V++YN +L GL  A + G  Q+L +EM      P++ T+N LI  
Sbjct: 249 LHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISY 308

Query: 413 LCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPT 472
           LC+N   +   ++   +  +     I ++  +IDG+CK G L+ A E+ +++P  GL P 
Sbjct: 309 LCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPN 368

Query: 473 VVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLH 532
           VV Y+ ++ GLC   + E+  + L  M    C  + VTFN L+  F QN    +V+ELL 
Sbjct: 369 VVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLE 428

Query: 533 KMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKS 570
           +M   E   +PD  T++ V++   K+    E   + KS
Sbjct: 429 QML--EHGCMPDVITYTTVINGFCKEGLIDEAVMLLKS 464



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 99/403 (24%), Positives = 189/403 (46%), Gaps = 11/403 (2%)

Query: 155 YGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKE 214
           Y  ++ G+CR G L  A RL            +    N ++Y  ++ +LC  G +  A  
Sbjct: 130 YNAMVAGYCRAGQLESARRLAA---------AVPVPPNAYTYFPVVRALCARGRIADALA 180

Query: 215 LFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLC 274
           +  EM  RG  P   +   ++   C  G +     +  ++   G   ++   N++++ +C
Sbjct: 181 VLDEMPRRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAIC 240

Query: 275 KGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVV 334
             G ++EA  LL  +   G  PD  +YN+++ G C+  R    +E+   M    C   +V
Sbjct: 241 DQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIV 300

Query: 335 SYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEM 394
           ++N LI+  C+    E    +  Q++ +G    +  Y T++ G+ + G    A ++ + M
Sbjct: 301 TFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRM 360

Query: 395 KLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRL 454
             Y ++P++  YN L+ GLC     +E  +L   +           FN L+D  C+ G +
Sbjct: 361 PSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLV 420

Query: 455 DNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTL 514
           D   EL  ++ + G +P V+TY+ +I+G C++G +++A   L  M   GC PN +++  +
Sbjct: 421 DRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIV 480

Query: 515 MHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAK 557
           + G     +     +L+ +M +    L P   TF+ +++ L K
Sbjct: 481 LKGLCSAERWVDAEDLMSQMIQQGCPLNP--ITFNTLINFLCK 521


>gi|449438705|ref|XP_004137128.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Cucumis sativus]
          Length = 628

 Score =  245 bits (626), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 146/471 (30%), Positives = 242/471 (51%), Gaps = 18/471 (3%)

Query: 88  NRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATW-LFKNMIAF 146
           NR  +A   FY  +   G+LP   T N L++ F    R         EA W L+  M   
Sbjct: 165 NRADEAFECFY-TMKEKGVLPTIETCNSLLSLFLKLNR--------TEAAWVLYAEMFRL 215

Query: 147 GVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKE 206
            ++  V T+  +IN  C+ G L  A     K   G  E   + K NI +Y+ I+   C  
Sbjct: 216 RIKSSVYTFNIMINVLCKEGKLKKA-----KDFVGHMETSGV-KPNIVTYNTIVHGYCSS 269

Query: 207 GLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTF 266
           G V+ A  +   MK + I P      +LI G C  G  EE + +F EM+  G RP+ + +
Sbjct: 270 GRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIY 329

Query: 267 NVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHS 326
           N +ID  C  G ++ A+   + M+++G++P   TYNSL+    +  R D A  +   +  
Sbjct: 330 NTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQE 389

Query: 327 KGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGY 386
           KG     ++YNILINGYC+  N ++A  L+ +++++G++ T  TY +LL  L +  +   
Sbjct: 390 KGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKE 449

Query: 387 AQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLID 446
           A  LF ++    V PD+  +N LIDG C N+ V+ A +L   ++  K       FN ++ 
Sbjct: 450 ADDLFKKITSEGVLPDVIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQ 509

Query: 447 GLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAP 506
           G C+ G+++ A ELF ++ ++G+ P  ++++ +I G  R+G ++ A      M   G  P
Sbjct: 510 GHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNP 569

Query: 507 NVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAK 557
            V+T+N L+ G  +N +     ELL +M    + + PDDTT+  +++ +AK
Sbjct: 570 TVLTYNALVQGLCKNQEGDLAEELLKEMV--SKGMTPDDTTYFTLIEGIAK 618



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 140/469 (29%), Positives = 238/469 (50%), Gaps = 19/469 (4%)

Query: 57  NEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNIL 116
           +EA   F  M      P I + N L     K    +A    Y ++  + +     T NI+
Sbjct: 168 DEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIM 227

Query: 117 INCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHK 176
           IN        LC E ++K+A     +M   GV+P+++TY T+++G+C +G +  A  +  
Sbjct: 228 INV-------LCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILT 280

Query: 177 KMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIH 236
            M     E       + F+Y  +I  +CK+G +++A ++F EM  +G+ P+ V+  TLI 
Sbjct: 281 TMKRQKIE------PDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLID 334

Query: 237 GFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNP 296
           GFC  GN +  +    EML  G  P + T+N +I  L    + +EA  +++ + ++G++P
Sbjct: 335 GFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISP 394

Query: 297 DRFTYNSLMDGYCLVGRIDTAREIFL---SMHSKGCKHTVVSYNILINGYCKILNVEEAM 353
           D  TYN L++GYC   R   A++ FL    M + G K T  +Y  L++   K   ++EA 
Sbjct: 395 DAITYNILINGYC---RCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEAD 451

Query: 354 SLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGL 413
            L+++I S GV   VI +N L+ G         A +L  +M    V PD  T+N ++ G 
Sbjct: 452 DLFKKITSEGVLPDVIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGH 511

Query: 414 CKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTV 473
           C+   V+EA +LF  ++    +     FN LI G  + G + +A+ + +++   G  PTV
Sbjct: 512 CREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTV 571

Query: 474 VTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNN 522
           +TY+ ++ GLC+  + + A + L  M   G  P+  T+ TL+ G  + N
Sbjct: 572 LTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAKVN 620



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 112/372 (30%), Positives = 184/372 (49%), Gaps = 4/372 (1%)

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
           +F Y  +I S C     D+A E F  MK +G+ P +  C +L+  F      E    L+ 
Sbjct: 153 VFDY--LIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYA 210

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
           EM  L  + ++ TFN+MI+ LCK GK+ +A   +  M   G+ P+  TYN+++ GYC  G
Sbjct: 211 EMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSG 270

Query: 313 RIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYN 372
           R++ A  I  +M  +  +    +Y  LI+G CK   +EEA  ++ +++  G+R + + YN
Sbjct: 271 RVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYN 330

Query: 373 TLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMN 432
           TL+ G    G    A    DEM    + P +STYN LI  L       EA  +   ++  
Sbjct: 331 TLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEK 390

Query: 433 KFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKA 492
                   +N LI+G C+      A+ L  ++   G+ PT  TY+ ++H L +K ++++A
Sbjct: 391 GISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEA 450

Query: 493 NDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVV 552
           +D    +   G  P+V+ FN L+ G   N+      ELL  M      + PD+ TF+ ++
Sbjct: 451 DDLFKKITSEGVLPDVIMFNALIDGHCSNSNVKGAFELLKDMD--RMKVPPDEVTFNTIM 508

Query: 553 DLLAKDEKYHEC 564
               ++ K  E 
Sbjct: 509 QGHCREGKVEEA 520



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 116/402 (28%), Positives = 193/402 (48%), Gaps = 38/402 (9%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CK G   L +A+ F G+M      P I ++N +      +   +A  +    +    + P
Sbjct: 232 CKEG--KLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEP 289

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           D  T   LI+       G+C + R++EA+ +F+ M+  G+RP  + Y TLI+GFC  GNL
Sbjct: 290 DSFTYGSLIS-------GMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNL 342

Query: 169 SVALRLHKKMVSGDYE------NGLIS-----------------------KTNIFSYSII 199
            +A     +M+           N LI                          +  +Y+I+
Sbjct: 343 DMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNIL 402

Query: 200 IDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGP 259
           I+  C+     KA  L  EM   GI P     T+L+H        +E + LF ++   G 
Sbjct: 403 INGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGV 462

Query: 260 RPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTARE 319
            P+++ FN +ID  C    +  A  LL+ M +  + PD  T+N++M G+C  G+++ ARE
Sbjct: 463 LPDVIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARE 522

Query: 320 IFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLF 379
           +F  M  +G K   +S+N LI+GY +  ++++A  +  +++  G   TV+TYN L+ GL 
Sbjct: 523 LFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLC 582

Query: 380 QAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQE 421
           +  +   A++L  EM    + PD +TY  LI+G+ K N   E
Sbjct: 583 KNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAKVNIPDE 624



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 85/306 (27%), Positives = 157/306 (51%), Gaps = 2/306 (0%)

Query: 264 LTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLS 323
           + F+ +I   C   + +EA      M ++G+ P   T NSL+  +  + R + A  ++  
Sbjct: 152 IVFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAE 211

Query: 324 MHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQ 383
           M     K +V ++NI+IN  CK   +++A      + ++GV+  ++TYNT++ G   +G+
Sbjct: 212 MFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGR 271

Query: 384 AGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNC 443
              A  +   MK   +EPD  TY  LI G+CK   ++EA K+F  +          I+N 
Sbjct: 272 VEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNT 331

Query: 444 LIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNG 503
           LIDG C  G LD A     ++ +KG+ PT+ TY+ +IH L  + + ++A   +  +++ G
Sbjct: 332 LIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKG 391

Query: 504 CAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
            +P+ +T+N L++G+ +     K   L  +M      + P   T++ ++ +L+K  +  E
Sbjct: 392 ISPDAITYNILINGYCRCANAKKAFLLHDEML--ASGIKPTKKTYTSLLHVLSKKNRMKE 449

Query: 564 CSAVSK 569
              + K
Sbjct: 450 ADDLFK 455


>gi|296083846|emb|CBI24234.3| unnamed protein product [Vitis vinifera]
          Length = 589

 Score =  245 bits (625), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 159/498 (31%), Positives = 257/498 (51%), Gaps = 25/498 (5%)

Query: 75  ISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIK 134
           I++ N L G + K    D     Y+++V  G+  +  TLNI+IN        LC   +I+
Sbjct: 62  INACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMIN-------ALCKNQKIE 114

Query: 135 EATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIF 194
                  +M   GV PDV+TY TLIN +CR G L  A  L   M SG    GL  K  +F
Sbjct: 115 NTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSM-SG---KGL--KPCVF 168

Query: 195 SYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEM 254
           +Y+ II+ LCK G   +AK +  EM   G++P       L+   C   N  +   +F EM
Sbjct: 169 TYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEM 228

Query: 255 LDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRI 314
              G  P+L++F+ +I  L K G +++A      M   GL PD   Y  L+ G+C  G +
Sbjct: 229 PSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVM 288

Query: 315 DTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTL 374
             A ++   M  +GC   VV+YN ++NG CK   + EA  L+ ++   GV     T+ TL
Sbjct: 289 SEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTL 348

Query: 375 LSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFH-----ML 429
           ++G  + G    A  LF+ M   N++PD+ TYN LIDG CK + +++  +L++      +
Sbjct: 349 INGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRI 408

Query: 430 EMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKL 489
             N   +GI     LI+G C  G +  A+ L+ ++ +KG   T++T + ++ G CR G  
Sbjct: 409 YPNHISYGI-----LINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNA 463

Query: 490 EKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFS 549
            KA++FL  M   G  P+ +T+NTL++GF++     +   L++KM      L+PD  T++
Sbjct: 464 VKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENS--GLLPDVITYN 521

Query: 550 IVVDLLAKDEKYHECSAV 567
           ++++  ++  +  E   +
Sbjct: 522 VILNGFSRQGRMQEAELI 539



 Score =  228 bits (582), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 151/501 (30%), Positives = 256/501 (51%), Gaps = 40/501 (7%)

Query: 75  ISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIK 134
           + + N++  A+ KN+  +   SF   +   G+ PD +T N LIN +       C +  ++
Sbjct: 97  VYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAY-------CRQGLLE 149

Query: 135 EATWLFKNMIAFGVRPDVITYGTLINGFCRTGN-------LSVALRLHKKMVSGDYE--- 184
           EA  L  +M   G++P V TY  +ING C+TG        L   L++     +  Y    
Sbjct: 150 EAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILL 209

Query: 185 ------NGLISKTNIF-------------SYSIIIDSLCKEGLVDKAKELFLEMKGRGIN 225
                 + ++    IF             S+S +I  L K G +D+A + F +MK  G+ 
Sbjct: 210 VECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLA 269

Query: 226 PAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGL 285
           P  V+ T LI GFC  G   E   +  EML+ G   +++T+N +++ LCK   ++EA+ L
Sbjct: 270 PDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADEL 329

Query: 286 LELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCK 345
              M +RG+ PD +T+ +L++GY   G ++ A  +F  M  +  K  VV+YN LI+G+CK
Sbjct: 330 FTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCK 389

Query: 346 ILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLST 405
              +E+   L+  +IS  +    I+Y  L++G    G    A +L+DEM     E  + T
Sbjct: 390 GSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIIT 449

Query: 406 YNILIDGLCK-NNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKL 464
            N ++ G C+  N V+    L +ML       GI  +N LI+G  K   +D A+ L +K+
Sbjct: 450 CNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGI-TYNTLINGFIKEENMDRAFALVNKM 508

Query: 465 PQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKT 524
              GL+P V+TY+++++G  R+G++++A   +L M + G  P+  T+ +L++G +  N  
Sbjct: 509 ENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNL 568

Query: 525 SKVVELLHKMAEPERNLVPDD 545
            +   +  +M   +R  VPDD
Sbjct: 569 KEAFRVHDEML--QRGFVPDD 587



 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 143/492 (29%), Positives = 243/492 (49%), Gaps = 17/492 (3%)

Query: 17  SKVKLSSLFKSPRQIAAVSSPETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPIS 76
            K++ +  F S  +   V       N  ++  C+ G+  L EA      M+     P + 
Sbjct: 111 QKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGL--LEEAFELMDSMSGKGLKPCVF 168

Query: 77  SFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNIL-INCFGNKERGLCVENRIKE 135
           ++N +   + K   Y        +++ IG+ PD  T NIL + C        C  + + +
Sbjct: 169 TYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVEC--------CRNDNMMD 220

Query: 136 ATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFS 195
           A  +F  M + GV PD++++  LI    + G L  AL+  +     D +N  ++  N+  
Sbjct: 221 AERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFR-----DMKNAGLAPDNVI- 274

Query: 196 YSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEML 255
           Y+I+I   C+ G++ +A ++  EM  +G    VV   T+++G C      E + LF EM 
Sbjct: 275 YTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMT 334

Query: 256 DLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRID 315
           + G  P+  TF  +I+   K G +N+A  L E+MIQR L PD  TYN+L+DG+C    ++
Sbjct: 335 ERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEME 394

Query: 316 TAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLL 375
              E++  M S+      +SY ILINGYC +  V EA  L+ +++  G   T+IT NT++
Sbjct: 395 KVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIV 454

Query: 376 SGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFE 435
            G  +AG A  A +    M L  + PD  TYN LI+G  K   +  A  L + +E +   
Sbjct: 455 KGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLL 514

Query: 436 FGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDF 495
             +  +N +++G  + GR+  A  +  K+ ++G+ P   TY+ +I+G   +  L++A   
Sbjct: 515 PDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRV 574

Query: 496 LLYMEKNGCAPN 507
              M + G  P+
Sbjct: 575 HDEMLQRGFVPD 586



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 111/367 (30%), Positives = 195/367 (53%), Gaps = 2/367 (0%)

Query: 191 TNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGL 250
           +N   + +++ +  +   + +  E F  +K +G+  ++  C +L+ G    G  +    +
Sbjct: 25  SNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEI 84

Query: 251 FIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCL 310
           + E++  G + N+ T N+MI+ LCK  KI      L  M ++G+ PD  TYN+L++ YC 
Sbjct: 85  YQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCR 144

Query: 311 VGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVIT 370
            G ++ A E+  SM  KG K  V +YN +ING CK      A  +  +++  G+     T
Sbjct: 145 QGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTAT 204

Query: 371 YNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLE 430
           YN LL    +      A+++FDEM    V PDL +++ LI  L KN C+ +A+K F  ++
Sbjct: 205 YNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMK 264

Query: 431 MNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLE 490
                    I+  LI G C+ G +  A ++  ++ ++G V  VVTY+ +++GLC++  L 
Sbjct: 265 NAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLS 324

Query: 491 KANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSI 550
           +A++    M + G  P+  TF TL++G+ ++   +K V L   M   +RNL PD  T++ 
Sbjct: 325 EADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMI--QRNLKPDVVTYNT 382

Query: 551 VVDLLAK 557
           ++D   K
Sbjct: 383 LIDGFCK 389



 Score =  119 bits (297), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 70/248 (28%), Positives = 128/248 (51%), Gaps = 4/248 (1%)

Query: 311 VGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVIT 370
           V R++    + L+  +  C    + +++L+  Y +   + E    +R + S G+  ++  
Sbjct: 7   VSRVEIVESLVLTYGN--CGSNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINA 64

Query: 371 YNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLE 430
            N+LL GL + G    A +++ E+    V+ ++ T NI+I+ LCKN  ++        +E
Sbjct: 65  CNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDME 124

Query: 431 MNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLE 490
                  +  +N LI+  C+ G L+ A+EL   +  KGL P V TY+ +I+GLC+ GK  
Sbjct: 125 EKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYL 184

Query: 491 KANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSI 550
           +A   L  M K G +P+  T+N L+    +N+       +  +M  P + +VPD  +FS 
Sbjct: 185 RAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEM--PSQGVVPDLVSFSA 242

Query: 551 VVDLLAKD 558
           ++ LL+K+
Sbjct: 243 LIGLLSKN 250


>gi|242042646|ref|XP_002459194.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
 gi|241922571|gb|EER95715.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
          Length = 847

 Score =  245 bits (625), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 171/568 (30%), Positives = 275/568 (48%), Gaps = 39/568 (6%)

Query: 58  EARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILI 117
           +AR+ F  M      P +++FN +  A+ +        +   K++  G+  +  T NI I
Sbjct: 98  DARHLFDEMLRRDVFPDVATFNNVLHALCQKGDIMESGALLAKVLKRGMSVNKFTCNIWI 157

Query: 118 NCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKK 177
                  RGLC   R++EA  L ++M A+ + PDV+TY TL+ G C+   +  A +  ++
Sbjct: 158 -------RGLCEGGRLEEAVALVESMDAY-IAPDVVTYNTLMRGLCKDSKVQEAAQYLRR 209

Query: 178 MVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHG 237
           M++     G I     F+Y+ IID  CK  ++ +A EL  +   +G  P  V   +LI+G
Sbjct: 210 MMN----QGCIPDD--FTYNTIIDGYCKRDMLQEATELLKDAIFKGFVPDRVTYCSLING 263

Query: 238 FCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPD 297
            C  G+ E    LF E      +P+L+ +N ++  LC+ G I  A  ++  M++ G +PD
Sbjct: 264 LCAEGDVERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEDGCHPD 323

Query: 298 RFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYR 357
            +TYN +++G C +G I  A  +      KG    V ++N +I+GYCK L ++ A+ L  
Sbjct: 324 IWTYNIVINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTMIDGYCKRLKLDSALQLVE 383

Query: 358 QIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNN 417
           ++   G+    ITYN++L+GL +AG+A    + F+EM L    P+  TYNILI+  CK N
Sbjct: 384 RMWMYGIAPDAITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKIN 443

Query: 418 CVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYS 477
            ++EA  +   +  +        FN LI G C+ G LD A+ LF KL +KG   T  T++
Sbjct: 444 QLEEASGVIVRMSQDGLVPDTISFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFN 503

Query: 478 IMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEP 537
           I+I     K  ++ A      M   G  P++ T+  L+ G  +     +    L +M   
Sbjct: 504 ILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRVLVDGSCKAANVDRAYVHLAEMV-- 561

Query: 538 ERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKSSYRACLYVTIFQPSSLGSMIGCTVRLM 597
            +  VP   TF  V++ LA + +  E  A+                      I   VR+ 
Sbjct: 562 SKGFVPSMATFGRVLNSLAMNHRVSEAVAI----------------------IHIMVRMG 599

Query: 598 PQPEMSDT-LGDDGDGNAGPIILSAVLL 624
             PE+ DT L  D    A P IL   L+
Sbjct: 600 VVPEVVDTILSTDKKEIAAPKILVEELM 627



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 144/508 (28%), Positives = 245/508 (48%), Gaps = 37/508 (7%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCF---GNKE----- 124
           P   ++N +  A+    ++D     Y +++S G+ PD  T  + I  F   G        
Sbjct: 8   PAAPAYNAIMDALVNTAYHDQAHKVYVRMLSAGVAPDARTHTVRIKSFCITGRPHVALRL 67

Query: 125 --------------------RGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCR 164
                               RGL       +A  LF  M+   V PDV T+  +++  C+
Sbjct: 68  LRSLPERGCDVKPLAYCTVVRGLYAHGHGYDARHLFDEMLRRDVFPDVATFNNVLHALCQ 127

Query: 165 TGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGI 224
            G++  +  L  K++    + G+    N F+ +I I  LC+ G +++A  L   M    I
Sbjct: 128 KGDIMESGALLAKVL----KRGM--SVNKFTCNIWIRGLCEGGRLEEAVALVESMDAY-I 180

Query: 225 NPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANG 284
            P VV   TL+ G C     +E       M++ G  P+  T+N +ID  CK   + EA  
Sbjct: 181 APDVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQEATE 240

Query: 285 LLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYC 344
           LL+  I +G  PDR TY SL++G C  G ++ A E+F    +K  K  +V YN L+ G C
Sbjct: 241 LLKDAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVVYNSLVKGLC 300

Query: 345 KILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLS 404
           +   +  A+ +  +++ +G    + TYN +++GL + G    A  + ++  +    PD+ 
Sbjct: 301 RQGLILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNISDAAVVMNDAIVKGYLPDVF 360

Query: 405 TYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKL 464
           T+N +IDG CK   +  A++L   + M         +N +++GLCKAG+     E F ++
Sbjct: 361 TFNTMIDGYCKRLKLDSALQLVERMWMYGIAPDAITYNSVLNGLCKAGKAKEVNETFEEM 420

Query: 465 PQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKT 524
             KG  P  +TY+I+I   C+  +LE+A+  ++ M ++G  P+ ++FNTL+HGF +N   
Sbjct: 421 ILKGCRPNAITYNILIENFCKINQLEEASGVIVRMSQDGLVPDTISFNTLIHGFCRNGDL 480

Query: 525 SKVVELLHKMAEPERNLVPDDTTFSIVV 552
                L  K+ E   +   D  TF+I++
Sbjct: 481 DGAYLLFQKLDEKGYSATAD--TFNILI 506



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 125/445 (28%), Positives = 210/445 (47%), Gaps = 19/445 (4%)

Query: 32  AAVSSPETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHY 91
           A ++      N  +   CK     + EA  +   M +    P   ++N +     K    
Sbjct: 178 AYIAPDVVTYNTLMRGLCKDS--KVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDML 235

Query: 92  DAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPD 151
                  +  +  G +PD +T   LIN       GLC E  ++ A  LF    A  ++PD
Sbjct: 236 QEATELLKDAIFKGFVPDRVTYCSLIN-------GLCAEGDVERALELFNEAQAKDLKPD 288

Query: 152 VITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDK 211
           ++ Y +L+ G CR G +  AL++  +MV    E+G     +I++Y+I+I+ LCK G +  
Sbjct: 289 LVVYNSLVKGLCRQGLILHALQVMNEMV----EDG--CHPDIWTYNIVINGLCKMGNISD 342

Query: 212 AKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMID 271
           A  +  +   +G  P V    T+I G+C     +    L   M   G  P+ +T+N +++
Sbjct: 343 AAVVMNDAIVKGYLPDVFTFNTMIDGYCKRLKLDSALQLVERMWMYGIAPDAITYNSVLN 402

Query: 272 CLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKH 331
            LCK GK  E N   E MI +G  P+  TYN L++ +C + +++ A  + + M   G   
Sbjct: 403 GLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMSQDGLVP 462

Query: 332 TVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLF 391
             +S+N LI+G+C+  +++ A  L++++   G   T  T+N L+           A+K+F
Sbjct: 463 DTISFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIF 522

Query: 392 DEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM--NKFEFGIEIFNCLIDGLC 449
            EM     +PDL TY +L+DG CK   V  A    H+ EM    F   +  F  +++ L 
Sbjct: 523 GEMISKGYKPDLYTYRVLVDGSCKAANVDRA--YVHLAEMVSKGFVPSMATFGRVLNSLA 580

Query: 450 KAGRLDNAWELFHKLPQKGLVPTVV 474
              R+  A  + H + + G+VP VV
Sbjct: 581 MNHRVSEAVAIIHIMVRMGVVPEVV 605



 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 122/459 (26%), Positives = 216/459 (47%), Gaps = 42/459 (9%)

Query: 143 MIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDS 202
           M  FG  P    Y  +++    T     A +++ +M+S           +  ++++ I S
Sbjct: 1   MDLFGCPPAAPAYNAIMDALVNTAYHDQAHKVYVRMLSAGV------APDARTHTVRIKS 54

Query: 203 LCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPN 262
            C  G    A  L   +  RG +   +   T++ G    G+  +   LF EML     P+
Sbjct: 55  FCITGRPHVALRLLRSLPERGCDVKPLAYCTVVRGLYAHGHGYDARHLFDEMLRRDVFPD 114

Query: 263 LLTFNVMIDCLCKGGKINEANGLLELMIQRGLN--------------------------- 295
           + TFN ++  LC+ G I E+  LL  +++RG++                           
Sbjct: 115 VATFNNVLHALCQKGDIMESGALLAKVLKRGMSVNKFTCNIWIRGLCEGGRLEEAVALVE 174

Query: 296 -------PDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILN 348
                  PD  TYN+LM G C   ++  A +    M ++GC     +YN +I+GYCK   
Sbjct: 175 SMDAYIAPDVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDM 234

Query: 349 VEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNI 408
           ++EA  L +  I  G     +TY +L++GL   G    A +LF+E +  +++PDL  YN 
Sbjct: 235 LQEATELLKDAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVVYNS 294

Query: 409 LIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKG 468
           L+ GLC+   +  A+++ + +  +     I  +N +I+GLCK G + +A  + +    KG
Sbjct: 295 LVKGLCRQGLILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNISDAAVVMNDAIVKG 354

Query: 469 LVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVV 528
            +P V T++ MI G C++ KL+ A   +  M   G AP+ +T+N++++G  +  K  +V 
Sbjct: 355 YLPDVFTFNTMIDGYCKRLKLDSALQLVERMWMYGIAPDAITYNSVLNGLCKAGKAKEVN 414

Query: 529 ELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAV 567
           E   +M    +   P+  T++I+++   K  +  E S V
Sbjct: 415 ETFEEMI--LKGCRPNAITYNILIENFCKINQLEEASGV 451



 Score = 49.7 bits (117), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 41/178 (23%), Positives = 78/178 (43%), Gaps = 16/178 (8%)

Query: 37  PET-QLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVI 95
           P+T   N  +H  C++G  +L+ A   F  +     S    +FN+L GA +   +     
Sbjct: 462 PDTISFNTLIHGFCRNG--DLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAE 519

Query: 96  SFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITY 155
             + +++S G  PD  T  +L++       G C    +  A      M++ G  P + T+
Sbjct: 520 KIFGEMISKGYKPDLYTYRVLVD-------GSCKAANVDRAYVHLAEMVSKGFVPSMATF 572

Query: 156 GTLINGFCRTGNLSVALRLHKKMVS----GDYENGLIS--KTNIFSYSIIIDSLCKEG 207
           G ++N       +S A+ +   MV      +  + ++S  K  I +  I+++ L K+G
Sbjct: 573 GRVLNSLAMNHRVSEAVAIIHIMVRMGVVPEVVDTILSTDKKEIAAPKILVEELMKKG 630


>gi|222634970|gb|EEE65102.1| hypothetical protein OsJ_20158 [Oryza sativa Japonica Group]
          Length = 552

 Score =  245 bits (625), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 142/419 (33%), Positives = 232/419 (55%), Gaps = 20/419 (4%)

Query: 101 LVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLIN 160
           +V  G+ P+  T NIL+       R LC   R++EA  +  +M   G  P+ +TY TL+ 
Sbjct: 1   MVRHGVAPNVYTYNILV-------RALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVA 53

Query: 161 GFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMK 220
            FCR G L  A    +++VS   E G  +K N+ +++ +++ LCK G ++ A+++F EM 
Sbjct: 54  AFCRAGELDGA----ERVVSLMREEG-NAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMV 108

Query: 221 GRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKIN 280
             G+ P VV   TL+ G+C  G   E   +F EM   G  P+++TF  +I   CK G + 
Sbjct: 109 REGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLE 168

Query: 281 EANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILI 340
           +A  L+  M +RGL  +  T+ +L+DG+C  G +D A      M   G + +VV YN LI
Sbjct: 169 QAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALI 228

Query: 341 NGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVE 400
           NGYCK+  ++ A  L R++ +  V+  V+TY+T++SG  + G    A +L  +M    V 
Sbjct: 229 NGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVL 288

Query: 401 PDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIE----IFNCLIDGLCKAGRLDN 456
           PD  TY+ LI GLC+   + +A +LF     N  + G++     +  LIDG CK G ++ 
Sbjct: 289 PDAITYSSLIRGLCEEKRLNDACELFE----NMLQLGVQPDEFTYTTLIDGHCKEGNVEK 344

Query: 457 AWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLM 515
           A  L  ++ +KG++P VVTYS++I+GL +  + ++A+  L  +      P+ + ++ LM
Sbjct: 345 ALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALM 403



 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 118/373 (31%), Positives = 209/373 (56%), Gaps = 3/373 (0%)

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
           N+++Y+I++ +LC  G +++A  +  +M+G G  P  V   TL+  FC AG  +    + 
Sbjct: 9   NVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVV 68

Query: 252 IEMLDLG-PRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCL 310
             M + G  +PNL+TFN M++ LCK G++  A  + + M++ GL PD  +YN+L+ GYC 
Sbjct: 69  SLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCK 128

Query: 311 VGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVIT 370
           VG +  +  +F  M  +G    VV++  LI+  CK  N+E+A++L  Q+   G+R   +T
Sbjct: 129 VGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVT 188

Query: 371 YNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLE 430
           +  L+ G  + G    A    +EM+   ++P +  YN LI+G CK   +  A +L   +E
Sbjct: 189 FTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREME 248

Query: 431 MNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLE 490
             + +  +  ++ +I G CK G LD+A++L  K+ +KG++P  +TYS +I GLC + +L 
Sbjct: 249 AKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLN 308

Query: 491 KANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSI 550
            A +    M + G  P+  T+ TL+ G  +     K + L  +M    + ++PD  T+S+
Sbjct: 309 DACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMI--RKGVLPDVVTYSV 366

Query: 551 VVDLLAKDEKYHE 563
           +++ L+K  +  E
Sbjct: 367 LINGLSKSARTKE 379



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 128/419 (30%), Positives = 224/419 (53%), Gaps = 11/419 (2%)

Query: 143 MIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDS 202
           M+  GV P+V TY  L+   C  G L  A+      V GD   G     N  +Y+ ++ +
Sbjct: 1   MVRHGVAPNVYTYNILVRALCARGRLEEAVG-----VVGDMR-GAGCAPNAVTYNTLVAA 54

Query: 203 LCKEGLVDKAKELFLEMKGRG-INPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRP 261
            C+ G +D A+ +   M+  G   P +V   ++++G C AG  E    +F EM+  G  P
Sbjct: 55  FCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAP 114

Query: 262 NLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIF 321
           +++++N ++   CK G ++E+  +   M QRGL PD  T+ SL+   C  G ++ A  + 
Sbjct: 115 DVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALV 174

Query: 322 LSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQA 381
             M  +G +   V++  LI+G+CK   +++A+    ++   G++ +V+ YN L++G  + 
Sbjct: 175 AQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKL 234

Query: 382 GQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFH-MLEMNKFEFGIEI 440
           G+   A++L  EM+   V+PD+ TY+ +I G CK   +  A +L   ML+       I  
Sbjct: 235 GRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAI-T 293

Query: 441 FNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYME 500
           ++ LI GLC+  RL++A ELF  + Q G+ P   TY+ +I G C++G +EKA      M 
Sbjct: 294 YSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMI 353

Query: 501 KNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDE 559
           + G  P+VVT++ L++G  ++ +T +   LL K+   +   VPD+  +  ++   +K E
Sbjct: 354 RKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDP--VPDNIKYDALMLCCSKAE 410



 Score =  202 bits (513), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 131/473 (27%), Positives = 236/473 (49%), Gaps = 35/473 (7%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHM-QPSPPISSFNLLFGAVAKNRHYDAVISFYRK 100
           N  +   C++G   L+ A      M       P + +FN +   + K    +     + +
Sbjct: 49  NTLVAAFCRAG--ELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDE 106

Query: 101 LVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLIN 160
           +V  GL PD ++ N L++       G C    + E+  +F  M   G+ PDV+T+ +LI+
Sbjct: 107 MVREGLAPDVVSYNTLLS-------GYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIH 159

Query: 161 GFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMK 220
             C+ GNL  A+ L  +M     E GL  + N  +++ +ID  CK+G +D A     EM+
Sbjct: 160 ATCKAGNLEQAVALVAQM----RERGL--RMNEVTFTALIDGFCKKGFLDDALLAVEEMR 213

Query: 221 GRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKIN 280
             GI P+VV    LI+G+C  G  +    L  EM     +P+++T++ +I   CK G ++
Sbjct: 214 KCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLD 273

Query: 281 EANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILI 340
            A  L + M+++G+ PD  TY+SL+ G C   R++ A E+F +M   G +    +Y  LI
Sbjct: 274 SAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLI 333

Query: 341 NGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVE 400
           +G+CK  NVE+A+SL+ ++I  GV   V+TY+ L++GL ++ +   A +L    KLY+ +
Sbjct: 334 DGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLL--FKLYHED 391

Query: 401 P-----------------DLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNC 443
           P                 +  +   L+ G C    ++EA K++  +    ++    +++ 
Sbjct: 392 PVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSI 451

Query: 444 LIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFL 496
           LI G C+ G +  A     ++ + G  P   +   ++ GL  +G + +A++ +
Sbjct: 452 LIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEADNAI 504



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 126/425 (29%), Positives = 200/425 (47%), Gaps = 52/425 (12%)

Query: 44  FLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVS 103
            +H  CK+G  NL +A      M          +F  L     K    D  +    ++  
Sbjct: 157 LIHATCKAG--NLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRK 214

Query: 104 IGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFC 163
            G+ P  +  N LIN       G C   R+  A  L + M A  V+PDV+TY T+I+G+C
Sbjct: 215 CGIQPSVVCYNALIN-------GYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYC 267

Query: 164 RTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRG 223
           + GNL  A +L++KM+    + G++   +  +YS +I  LC+E  ++ A ELF  M   G
Sbjct: 268 KVGNLDSAFQLNQKML----KKGVLP--DAITYSSLIRGLCEEKRLNDACELFENMLQLG 321

Query: 224 INPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEAN 283
           + P     TTLI G C  GN E+   L  EM+  G  P+++T++V+I+ L K  +  EA+
Sbjct: 322 VQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAH 381

Query: 284 GLLELMIQRGLNPDRFTYNSLM---------------DGYCLVGRIDTAREIFLSMHSKG 328
            LL  +      PD   Y++LM                G+C+ G +  A +++ SM  + 
Sbjct: 382 RLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRN 441

Query: 329 CKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQ 388
            K     Y+ILI+G+C+  NV +A+S ++Q++ +G      +  +L+ GLF+ G    A 
Sbjct: 442 WKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEAD 501

Query: 389 KLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGL 448
                    N   DL T   L D         EA K   ++++N+ E  ++    LID L
Sbjct: 502 ---------NAIQDLLTCCPLADA--------EASK--ALIDLNRKEGNVD---ALIDVL 539

Query: 449 CKAGR 453
           C   R
Sbjct: 540 CGMAR 544



 Score =  102 bits (253), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 85/331 (25%), Positives = 139/331 (41%), Gaps = 53/331 (16%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
           N  ++  CK G ++L  AR     M   +  P + +++ +     K  + D+     +K+
Sbjct: 225 NALINGYCKLGRMDL--ARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKM 282

Query: 102 VSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLING 161
           +  G+LPD +T + LI       RGLC E R+ +A  LF+NM+  GV+PD  TY TLI+G
Sbjct: 283 LKKGVLPDAITYSSLI-------RGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDG 335

Query: 162 FCRTGNLSVALRLHKKMVSG-------DYE---NGL------------------------ 187
            C+ GN+  AL LH +M+          Y    NGL                        
Sbjct: 336 HCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPD 395

Query: 188 ----------ISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHG 237
                      SK    S   ++   C +GL+ +A +++  M  R       V + LIHG
Sbjct: 396 NIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHG 455

Query: 238 FCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPD 297
            C  GN  +      +ML  G  PN  +   ++  L + G + EA+  ++ ++      D
Sbjct: 456 HCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEADNAIQDLLTCCPLAD 515

Query: 298 RFTYNSLMDGYCLVGRIDTAREIFLSMHSKG 328
                +L+D     G +D   ++   M   G
Sbjct: 516 AEASKALIDLNRKEGNVDALIDVLCGMARDG 546


>gi|357151724|ref|XP_003575883.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Brachypodium distachyon]
          Length = 757

 Score =  244 bits (624), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 144/457 (31%), Positives = 240/457 (52%), Gaps = 13/457 (2%)

Query: 78  FNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEAT 137
           +N L   +A+      + S Y ++ S G+ PD +T N +I+        LC   + + A 
Sbjct: 164 YNHLLTVLAEGSKIKLLESAYTEMSSQGIEPDVVTFNTVID-------ALCRARQARTAV 216

Query: 138 WLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYS 197
            + + M +  V PD  T+ TL+ GF   G++  ALRL  +M     E G  S T++ + +
Sbjct: 217 LMLEEMSSCDVAPDETTFTTLMEGFVEEGSIEAALRLKARM----SEMG-CSPTSV-TVN 270

Query: 198 IIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDL 257
           ++I+  CK G V  A     +    G  P  V  +T ++G C  G+ +    +   ML  
Sbjct: 271 VLINGYCKLGRVGDALGYIQQEIADGFEPDRVTFSTFVNGLCQNGHVDHALKVLGLMLQE 330

Query: 258 GPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTA 317
           G  P++ T++ +I+CLC  G++ EA G++  M+  G  PD  T+N+L+   C   +++ A
Sbjct: 331 GCEPDVYTYSTVINCLCNNGELEEAKGIVNQMVDSGCLPDTTTFNTLIVALCTENQLEEA 390

Query: 318 REIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSG 377
            ++   +  KG    V ++NILIN  CK+ +   A+ L+ ++ S+G     +TYN L+  
Sbjct: 391 LDLARELTVKGLSPNVYTFNILINALCKVGDPHLAVRLFEEMKSSGCTPDEVTYNILIDN 450

Query: 378 LFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFG 437
           L  +G+   A  L  EM++        TYN +IDGLCK   ++EA ++F  +++      
Sbjct: 451 LCSSGKLAKALDLLKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQMDVTGIGRN 510

Query: 438 IEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLL 497
              FN LIDGLC A R+D+A EL  ++  +GL P  VTY+ ++   C++G + KA D L 
Sbjct: 511 AITFNTLIDGLCNAERIDDAAELVDQMISEGLQPNNVTYNSILTHYCKQGNISKAADILQ 570

Query: 498 YMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKM 534
            M  NG   +VVT+ TL++G  +  +T   ++LL  M
Sbjct: 571 TMTANGFEVDVVTYATLINGLCKARRTQAALKLLRGM 607



 Score =  239 bits (609), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 147/490 (30%), Positives = 230/490 (46%), Gaps = 49/490 (10%)

Query: 66  MTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKER 125
           M+    +P  ++F  L     +    +A +    ++  +G  P  +T+N+LIN       
Sbjct: 222 MSSCDVAPDETTFTTLMEGFVEEGSIEAALRLKARMSEMGCSPTSVTVNVLIN------- 274

Query: 126 GLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYEN 185
           G C   R+ +A    +  IA G  PD +T+ T +NG C+ G++  AL++   M+    E 
Sbjct: 275 GYCKLGRVGDALGYIQQEIADGFEPDRVTFSTFVNGLCQNGHVDHALKVLGLMLQEGCE- 333

Query: 186 GLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWE 245
                 ++++YS +I+ LC  G +++AK +  +M   G  P      TLI   C     E
Sbjct: 334 -----PDVYTYSTVINCLCNNGELEEAKGIVNQMVDSGCLPDTTTFNTLIVALCTENQLE 388

Query: 246 EVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLM 305
           E   L  E+   G  PN+ TFN++I+ LCK G  + A  L E M   G  PD  TYN L+
Sbjct: 389 EALDLARELTVKGLSPNVYTFNILINALCKVGDPHLAVRLFEEMKSSGCTPDEVTYNILI 448

Query: 306 DGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVR 365
           D  C  G++  A ++   M   GC  + V+YN +I+G CK   +EEA  ++ Q+   G+ 
Sbjct: 449 DNLCSSGKLAKALDLLKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQMDVTGIG 508

Query: 366 QTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKL 425
           +  IT+NTL+ GL  A +   A +L D+M    ++P+  TYN ++   CK   + +A  +
Sbjct: 509 RNAITFNTLIDGLCNAERIDDAAELVDQMISEGLQPNNVTYNSILTHYCKQGNISKAADI 568

Query: 426 FHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPT------------- 472
              +  N FE  +  +  LI+GLCKA R   A +L   +  KG+ PT             
Sbjct: 569 LQTMTANGFEVDVVTYATLINGLCKARRTQAALKLLRGMRMKGMKPTPKAYNPVIQSLFR 628

Query: 473 ----------------------VVTYSIMIHGLCR-KGKLEKANDFLLYMEKNGCAPNVV 509
                                   TY I+  GLCR  G +++A DFL+ M  NG  P   
Sbjct: 629 GNNGRDALSLFREMTEVGGPPDAFTYKIVFRGLCRGGGPIKEAFDFLVEMADNGFIPEFS 688

Query: 510 TFNTLMHGFL 519
           +F  L  G L
Sbjct: 689 SFRMLAEGLL 698



 Score =  201 bits (512), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 133/429 (31%), Positives = 208/429 (48%), Gaps = 17/429 (3%)

Query: 29  RQIAAVSSPE-TQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAK 87
           ++IA    P+    + F++  C++G  +++ A    G M      P + +++ +   +  
Sbjct: 291 QEIADGFEPDRVTFSTFVNGLCQNG--HVDHALKVLGLMLQEGCEPDVYTYSTVINCLCN 348

Query: 88  NRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFG 147
           N   +       ++V  G LPD  T N LI         LC EN+++EA  L + +   G
Sbjct: 349 NGELEEAKGIVNQMVDSGCLPDTTTFNTLI-------VALCTENQLEEALDLARELTVKG 401

Query: 148 VRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEG 207
           + P+V T+  LIN  C+ G+  +A+RL ++M S           +  +Y+I+ID+LC  G
Sbjct: 402 LSPNVYTFNILINALCKVGDPHLAVRLFEEMKSSG------CTPDEVTYNILIDNLCSSG 455

Query: 208 LVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFN 267
            + KA +L  EM+  G   + V   T+I G C     EE   +F +M   G   N +TFN
Sbjct: 456 KLAKALDLLKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQMDVTGIGRNAITFN 515

Query: 268 VMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSK 327
            +ID LC   +I++A  L++ MI  GL P+  TYNS++  YC  G I  A +I  +M + 
Sbjct: 516 TLIDGLCNAERIDDAAELVDQMISEGLQPNNVTYNSILTHYCKQGNISKAADILQTMTAN 575

Query: 328 GCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYA 387
           G +  VV+Y  LING CK    + A+ L R +   G++ T   YN ++  LF+      A
Sbjct: 576 GFEVDVVTYATLINGLCKARRTQAALKLLRGMRMKGMKPTPKAYNPVIQSLFRGNNGRDA 635

Query: 388 QKLFDEMKLYNVEPDLSTYNILIDGLCKNNC-VQEAVKLFHMLEMNKFEFGIEIFNCLID 446
             LF EM      PD  TY I+  GLC+    ++EA      +  N F      F  L +
Sbjct: 636 LSLFREMTEVGGPPDAFTYKIVFRGLCRGGGPIKEAFDFLVEMADNGFIPEFSSFRMLAE 695

Query: 447 GLCKAGRLD 455
           GL   G  D
Sbjct: 696 GLLNLGMDD 704



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 109/382 (28%), Positives = 186/382 (48%), Gaps = 8/382 (2%)

Query: 186 GLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWE 245
           G+ + T ++++ + +  L +   +   +  + EM  +GI P VV   T+I   C A    
Sbjct: 156 GVQANTEVYNHLLTV--LAEGSKIKLLESAYTEMSSQGIEPDVVTFNTVIDALCRARQAR 213

Query: 246 EVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLM 305
               +  EM      P+  TF  +++   + G I  A  L   M + G +P   T N L+
Sbjct: 214 TAVLMLEEMSSCDVAPDETTFTTLMEGFVEEGSIEAALRLKARMSEMGCSPTSVTVNVLI 273

Query: 306 DGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVR 365
           +GYC +GR+  A        + G +   V+++  +NG C+  +V+ A+ +   ++  G  
Sbjct: 274 NGYCKLGRVGDALGYIQQEIADGFEPDRVTFSTFVNGLCQNGHVDHALKVLGLMLQEGCE 333

Query: 366 QTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKL 425
             V TY+T+++ L   G+   A+ + ++M      PD +T+N LI  LC  N ++EA+ L
Sbjct: 334 PDVYTYSTVINCLCNNGELEEAKGIVNQMVDSGCLPDTTTFNTLIVALCTENQLEEALDL 393

Query: 426 FHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCR 485
              L +      +  FN LI+ LCK G    A  LF ++   G  P  VTY+I+I  LC 
Sbjct: 394 ARELTVKGLSPNVYTFNILINALCKVGDPHLAVRLFEEMKSSGCTPDEVTYNILIDNLCS 453

Query: 486 KGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKM--AEPERNLVP 543
            GKL KA D L  ME +GC  + VT+NT++ G  +  +  +  E+  +M      RN + 
Sbjct: 454 SGKLAKALDLLKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQMDVTGIGRNAI- 512

Query: 544 DDTTFSIVVDLLAKDEKYHECS 565
              TF+ ++D L   E+  + +
Sbjct: 513 ---TFNTLIDGLCNAERIDDAA 531



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 58/267 (21%), Positives = 104/267 (38%), Gaps = 38/267 (14%)

Query: 293 GLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEA 352
           GL P R  Y  ++      G  D  + +   M  +G +  +      I  Y ++   ++A
Sbjct: 85  GLTPSRDVYEEIIRKLGTAGAFDLMKVLVGEMRREGHEVGLGLVQSFIGSYARLQLFDDA 144

Query: 353 MSLYR-QIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILID 411
             L   Q+   GV+     YN LL+ L +  +    +  + EM    +EPD+ T      
Sbjct: 145 FDLVSNQLDMFGVQANTEVYNHLLTVLAEGSKIKLLESAYTEMSSQGIEPDVVT------ 198

Query: 412 GLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVP 471
                                        FN +ID LC+A +   A  +  ++    + P
Sbjct: 199 -----------------------------FNTVIDALCRARQARTAVLMLEEMSSCDVAP 229

Query: 472 TVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELL 531
              T++ ++ G   +G +E A      M + GC+P  VT N L++G+ +  +    +  +
Sbjct: 230 DETTFTTLMEGFVEEGSIEAALRLKARMSEMGCSPTSVTVNVLINGYCKLGRVGDALGYI 289

Query: 532 HKMAEPERNLVPDDTTFSIVVDLLAKD 558
            +  E      PD  TFS  V+ L ++
Sbjct: 290 QQ--EIADGFEPDRVTFSTFVNGLCQN 314



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 61/239 (25%), Positives = 98/239 (41%), Gaps = 14/239 (5%)

Query: 56  LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNI 115
           + EA   F  M          +FN L   +      D       +++S GL P+ +T N 
Sbjct: 492 IEEAEEVFDQMDVTGIGRNAITFNTLIDGLCNAERIDDAAELVDQMISEGLQPNNVTYNS 551

Query: 116 LINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLH 175
           ++  +       C +  I +A  + + M A G   DV+TY TLING C+      AL+L 
Sbjct: 552 ILTHY-------CKQGNISKAADILQTMTANGFEVDVVTYATLINGLCKARRTQAALKLL 604

Query: 176 KKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLI 235
           + M       G+  K    +Y+ +I SL +      A  LF EM   G  P       + 
Sbjct: 605 RGM----RMKGM--KPTPKAYNPVIQSLFRGNNGRDALSLFREMTEVGGPPDAFTYKIVF 658

Query: 236 HGFCCAGN-WEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRG 293
            G C  G   +E     +EM D G  P   +F ++ + L   G  +     +EL++++ 
Sbjct: 659 RGLCRGGGPIKEAFDFLVEMADNGFIPEFSSFRMLAEGLLNLGMDDYLIRAIELIVEKA 717


>gi|388513011|gb|AFK44567.1| unknown [Medicago truncatula]
          Length = 348

 Score =  244 bits (624), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 131/361 (36%), Positives = 212/361 (58%), Gaps = 13/361 (3%)

Query: 104 IGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFC 163
           +G  P+ +TLN LI       +GLC++ +I +A      ++A G   D ++YGTLI+G C
Sbjct: 1   MGYHPNTITLNTLI-------KGLCLKGQIHQAFLFHDKLVALGFHLDQVSYGTLIHGLC 53

Query: 164 RTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRG 223
           + G    AL L +++      +G + + N   Y+ +I  +CK+  V+ A +L+ EM  +G
Sbjct: 54  KVGETRAALDLLQRV------DGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKG 107

Query: 224 INPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEAN 283
           I+P VV  + LI GF   G  ++   LF +++    +P+  TFN+++D  CK  K+ E  
Sbjct: 108 ISPNVVTYSALISGFFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGK 167

Query: 284 GLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGY 343
            +  +M+++G+ PD  TYNSL+DGY LV  ++TA+ IF +M   G    + SYNILING+
Sbjct: 168 TVFAMMMKQGIIPDVVTYNSLVDGYRLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGF 227

Query: 344 CKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDL 403
           CKI  V++AM+L+ ++    +   V+TYN+L+ GL ++G+  YA +L D+M    V P++
Sbjct: 228 CKIKKVDKAMNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNI 287

Query: 404 STYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHK 463
            TYN +ID L K + V +A+ L    +    +  +  +  LIDGLCK GRL +A  +F  
Sbjct: 288 LTYNSIIDALFKTHQVDKAIALITKFKDQGIQPSMYTYTILIDGLCKGGRLKDARNIFED 347

Query: 464 L 464
           L
Sbjct: 348 L 348



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 109/350 (31%), Positives = 181/350 (51%), Gaps = 6/350 (1%)

Query: 147 GVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKE 206
           G  P+ IT  TLI G C  G +  A   H K+V+  +        +  SY  +I  LCK 
Sbjct: 2   GYHPNTITLNTLIKGLCLKGQIHQAFLFHDKLVALGFH------LDQVSYGTLIHGLCKV 55

Query: 207 GLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTF 266
           G    A +L   + G+ +    V+  T+I+G C   +  +   L+ EM+  G  PN++T+
Sbjct: 56  GETRAALDLLQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTY 115

Query: 267 NVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHS 326
           + +I      GK+ +A  L   +I   + PD +T+N L+DG+C   ++   + +F  M  
Sbjct: 116 SALISGFFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMK 175

Query: 327 KGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGY 386
           +G    VV+YN L++GY  +  V  A S++  +   GV   + +YN L++G  +  +   
Sbjct: 176 QGIIPDVVTYNSLVDGYRLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDK 235

Query: 387 AQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLID 446
           A  LF+EM   N+ P++ TYN LIDGL K+  +  A++L   +        I  +N +ID
Sbjct: 236 AMNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSIID 295

Query: 447 GLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFL 496
            L K  ++D A  L  K   +G+ P++ TY+I+I GLC+ G+L+ A +  
Sbjct: 296 ALFKTHQVDKAIALITKFKDQGIQPSMYTYTILIDGLCKGGRLKDARNIF 345



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 96/311 (30%), Positives = 175/311 (56%), Gaps = 2/311 (0%)

Query: 257 LGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDT 316
           +G  PN +T N +I  LC  G+I++A    + ++  G + D+ +Y +L+ G C VG    
Sbjct: 1   MGYHPNTITLNTLIKGLCLKGQIHQAFLFHDKLVALGFHLDQVSYGTLIHGLCKVGETRA 60

Query: 317 AREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLS 376
           A ++   +  K  +   V YN +I G CK  +V +A  LY +++S G+   V+TY+ L+S
Sbjct: 61  ALDLLQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALIS 120

Query: 377 GLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEF 436
           G F  G+   A  LF+++ L N++PD  T+NIL+DG CK+  ++E   +F M+       
Sbjct: 121 GFFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIP 180

Query: 437 GIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFL 496
            +  +N L+DG      ++ A  +F+ + Q G+ P + +Y+I+I+G C+  K++KA +  
Sbjct: 181 DVVTYNSLVDGYRLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLF 240

Query: 497 LYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLA 556
             M      PNVVT+N+L+ G  ++ + S  ++L+ +M   +R + P+  T++ ++D L 
Sbjct: 241 NEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMH--DRGVPPNILTYNSIIDALF 298

Query: 557 KDEKYHECSAV 567
           K  +  +  A+
Sbjct: 299 KTHQVDKAIAL 309



 Score =  135 bits (339), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 91/292 (31%), Positives = 145/292 (49%), Gaps = 18/292 (6%)

Query: 34  VSSPETQLNEFLHENCKSGII---NLNEARYFFGYMTHMQPSPPISSFN-LLFGAVAKNR 89
           V     QLN  ++     G+    ++N+A   +  M     SP + +++ L+ G     +
Sbjct: 68  VDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFVVGK 127

Query: 90  HYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVR 149
             DA I  + K++   + PD  T NIL++       G C + ++KE   +F  M+  G+ 
Sbjct: 128 LKDA-IDLFNKIILENIKPDGYTFNILVD-------GFCKDRKMKEGKTVFAMMMKQGII 179

Query: 150 PDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLV 209
           PDV+TY +L++G+     ++ A  +   M  G          +I SY+I+I+  CK   V
Sbjct: 180 PDVVTYNSLVDGYRLVKEVNTAKSIFNTMAQGGVN------PDIRSYNILINGFCKIKKV 233

Query: 210 DKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVM 269
           DKA  LF EM  + I P VV   +LI G   +G       L  +M D G  PN+LT+N +
Sbjct: 234 DKAMNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSI 293

Query: 270 IDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIF 321
           ID L K  ++++A  L+     +G+ P  +TY  L+DG C  GR+  AR IF
Sbjct: 294 IDALFKTHQVDKAIALITKFKDQGIQPSMYTYTILIDGLCKGGRLKDARNIF 345



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 59/199 (29%), Positives = 98/199 (49%), Gaps = 13/199 (6%)

Query: 56  LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNI 115
           + E +  F  M      P + ++N L       +  +   S +  +   G+ PD  + NI
Sbjct: 163 MKEGKTVFAMMMKQGIIPDVVTYNSLVDGYRLVKEVNTAKSIFNTMAQGGVNPDIRSYNI 222

Query: 116 LINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLH 175
           LIN       G C   ++ +A  LF  M    + P+V+TY +LI+G  ++G +S AL+L 
Sbjct: 223 LIN-------GFCKIKKVDKAMNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLV 275

Query: 176 KKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLI 235
            +M    ++ G+    NI +Y+ IID+L K   VDKA  L  + K +GI P++   T LI
Sbjct: 276 DQM----HDRGV--PPNILTYNSIIDALFKTHQVDKAIALITKFKDQGIQPSMYTYTILI 329

Query: 236 HGFCCAGNWEEVNGLFIEM 254
            G C  G  ++   +F ++
Sbjct: 330 DGLCKGGRLKDARNIFEDL 348


>gi|218194637|gb|EEC77064.1| hypothetical protein OsI_15455 [Oryza sativa Indica Group]
          Length = 864

 Score =  244 bits (624), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 158/555 (28%), Positives = 276/555 (49%), Gaps = 20/555 (3%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
           N  +H    SG+   NE+   F  M+     P + + N    A+ K+   +     +  +
Sbjct: 299 NSLIHGYSISGM--WNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSM 356

Query: 102 VSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLING 161
           V  G  PD ++ + +++ +         ++ + +   +F  M+  G+ P+   +  LIN 
Sbjct: 357 VLKGPKPDIISYSTMLHGYAT-----ATDSCLADVHNIFNLMLTKGIAPNKHVFNILINA 411

Query: 162 FCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKG 221
           + R G +  A+ + + M       G+I  T   +++ +I SLC+ G +D A   F  M  
Sbjct: 412 YARCGMMDKAMLIFEDM----QNKGMIPDT--VTFATVISSLCRIGRLDDALHKFNHMVD 465

Query: 222 RGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLG-PRPNLLTFNVMIDCLCKGGKIN 280
            G+ P+  V   LI G C  G   +   L  EM++   P P +  F+ +I+ LCK G++ 
Sbjct: 466 IGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVA 525

Query: 281 EANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILI 340
           E   ++++M+Q G  P+  T+NSLM+GYCLVG ++ A  +  +M S G +     Y  L+
Sbjct: 526 EGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLV 585

Query: 341 NGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVE 400
           +GYCK   +++A++++R ++  GV+ T + Y+ +L GLFQA +   A+K+F EM      
Sbjct: 586 DGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTT 645

Query: 401 PDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWEL 460
             + TY +++ GLC+NNC  EA  L   L     +F I  FN +I  + K GR   A EL
Sbjct: 646 VSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKEL 705

Query: 461 FHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQ 520
           F  +   GLVP + TYS+MI  L ++   E+A++  + +EK+G A +    N ++   L 
Sbjct: 706 FDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIVRMLLN 765

Query: 521 NNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKSSYRACLYV-- 578
             + +K    L  +   E NL  + +T S++  L +++         + +   A L +  
Sbjct: 766 KAEVAKASNYLSIIG--ENNLTLEASTISLLASLFSREGMIKGLFGTAPAPAPALLELEL 823

Query: 579 --TIFQPSSLGSMIG 591
             T+  P  LG  +G
Sbjct: 824 SQTVSAPPKLGVELG 838



 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 140/511 (27%), Positives = 255/511 (49%), Gaps = 18/511 (3%)

Query: 56  LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNI 115
           +++A   F  M      P I   N +   + K +  D   S  +K+V  G+ PD  T ++
Sbjct: 206 VDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSL 265

Query: 116 LINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLH 175
           +I+       GLC    + +A  + + M+  G RP+ ITY +LI+G+  +G  + ++R+ 
Sbjct: 266 IID-------GLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVF 318

Query: 176 KKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLI 235
           K+M S     G+I   +  + +  I +L K G  ++AK +F  M  +G  P ++  +T++
Sbjct: 319 KQMSSC----GVIPTVD--NCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTML 372

Query: 236 HGFCCAGN--WEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRG 293
           HG+  A +    +V+ +F  ML  G  PN   FN++I+   + G +++A  + E M  +G
Sbjct: 373 HGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKG 432

Query: 294 LNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAM 353
           + PD  T+ +++   C +GR+D A   F  M   G   +   Y  LI G C    + +A 
Sbjct: 433 MIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAK 492

Query: 354 SLYRQIISNGVRQTVITY-NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDG 412
            L  ++++  +    + Y +++++ L + G+    + + D M      P++ T+N L++G
Sbjct: 493 ELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEG 552

Query: 413 LCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPT 472
            C    ++EA  L   +     E    I+  L+DG CK GR+D+A  +F  +  KG+ PT
Sbjct: 553 YCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPT 612

Query: 473 VVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLH 532
            V YSI++HGL +  +   A      M ++G   ++ T+  ++ G  +NN T +   LL 
Sbjct: 613 SVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLE 672

Query: 533 KMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
           K+     N+  D  TF+IV+  + K  +  E
Sbjct: 673 KLF--AMNVKFDIITFNIVISAMFKVGRRQE 701



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 132/474 (27%), Positives = 234/474 (49%), Gaps = 22/474 (4%)

Query: 72  SPP-ISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVE 130
           SPP I ++N+L     +    D  ++   +L+  GL PD  + +++         G   +
Sbjct: 152 SPPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYSLIY--------GFVKD 203

Query: 131 NRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISK 190
             + +A  LF  M+  GV P ++   ++I   C+   +  A  + +KMV    ++G+   
Sbjct: 204 GEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMV----DSGI--A 257

Query: 191 TNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGL 250
            ++F+YS+IID LCK   +DKA+ +  +M   G  P  +   +LIHG+  +G W E   +
Sbjct: 258 PDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRV 317

Query: 251 FIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCL 310
           F +M   G  P +   N  I  L K G+ NEA  + + M+ +G  PD  +Y++++ GY  
Sbjct: 318 FKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYAT 377

Query: 311 VGR--IDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTV 368
                +     IF  M +KG       +NILIN Y +   +++AM ++  + + G+    
Sbjct: 378 ATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDT 437

Query: 369 ITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLF-H 427
           +T+ T++S L + G+   A   F+ M    V P  + Y  LI G C +  + +A +L   
Sbjct: 438 VTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISE 497

Query: 428 MLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKG 487
           M+  +    G++ F+ +I+ LCK GR+    ++   + Q G  P VVT++ ++ G C  G
Sbjct: 498 MMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVG 557

Query: 488 KLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVV----ELLHKMAEP 537
            +E+A   L  M   G  PN   + TL+ G+ +N +    +    ++LHK  +P
Sbjct: 558 NMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKP 611



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 138/498 (27%), Positives = 241/498 (48%), Gaps = 57/498 (11%)

Query: 136 ATWLFKNMIAFGVR----PDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKT 191
           A  LFK M  +       P + TY  LI+ + R     + L +  +++    +NGL    
Sbjct: 136 AIELFKRMDRWACPRHSPPTIHTYNILIDCYRRVHRPDLGLAIVGRLL----KNGL--GP 189

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
           + FSYS+I     K+G VDKA  LFLEM  +G+ P +++C ++I   C     ++   + 
Sbjct: 190 DDFSYSLIY-GFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIV 248

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
            +M+D G  P+L T++++ID LCK   +++A  +LE M++ G  P+  TYNSL+ GY + 
Sbjct: 249 QKMVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSIS 308

Query: 312 -----------------------------------GRIDTAREIFLSMHSKGCKHTVVSY 336
                                              GR + A+ IF SM  KG K  ++SY
Sbjct: 309 GMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISY 368

Query: 337 NILINGYCKILN--VEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEM 394
           + +++GY    +  + +  +++  +++ G+      +N L++   + G    A  +F++M
Sbjct: 369 STMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDM 428

Query: 395 KLYNVEPDLSTYNILIDGLCKNNCVQEAVKLF-HMLEMNKFEFGIEIFNCLIDGLCKAGR 453
           +   + PD  T+  +I  LC+   + +A+  F HM+++        ++ CLI G C  G 
Sbjct: 429 QNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIG-VPPSEAVYGCLIQGCCNHGE 487

Query: 454 LDNAWELFHKLPQKGLVPTVVTY-SIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFN 512
           L  A EL  ++  K + P  V Y S +I+ LC++G++ +  D +  M + G  PNVVTFN
Sbjct: 488 LVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFN 547

Query: 513 TLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKSSY 572
           +LM G+       +   LL  MA     + P+   +  +VD   K+ +  +   V    +
Sbjct: 548 SLMEGYCLVGNMEEAFALLDAMA--SIGIEPNCYIYGTLVDGYCKNGRIDDALTV----F 601

Query: 573 RACLYVTIFQPSSLGSMI 590
           R  L+  +   S L S+I
Sbjct: 602 RDMLHKGVKPTSVLYSII 619


>gi|449523421|ref|XP_004168722.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Cucumis sativus]
          Length = 628

 Score =  244 bits (624), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 146/471 (30%), Positives = 241/471 (51%), Gaps = 18/471 (3%)

Query: 88  NRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATW-LFKNMIAF 146
           NR  +A   FY  +   G+LP   T N L++ F    R         EA W L+  M   
Sbjct: 165 NRADEAFECFY-TMKEKGVLPTIETCNSLLSLFLKLNR--------TEAAWVLYAEMFRL 215

Query: 147 GVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKE 206
            ++  V T+  +IN  C+ G L  A     K   G  E   + K NI +Y+ I+   C  
Sbjct: 216 RIKSSVYTFNIMINVLCKEGKLKKA-----KDFVGHMETSGV-KPNIVTYNTIVHGYCSS 269

Query: 207 GLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTF 266
           G V+ A  +   MK + I P      +LI G C  G  EE + +F EM+  G RP+ + +
Sbjct: 270 GRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIY 329

Query: 267 NVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHS 326
           N +ID  C  G ++ A+   + M+++G++P   TYNSL+    +  R D A  +   +  
Sbjct: 330 NTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQE 389

Query: 327 KGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGY 386
           KG     ++YNILINGYC+  N ++A  L+ +++++G++ T  TY +LL  L +  +   
Sbjct: 390 KGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKE 449

Query: 387 AQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLID 446
           A  LF ++    V PD   +N LIDG C N+ V+ A +L   ++  K       FN ++ 
Sbjct: 450 ADDLFKKITSEGVLPDAIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQ 509

Query: 447 GLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAP 506
           G C+ G+++ A ELF ++ ++G+ P  ++++ +I G  R+G ++ A      M   G  P
Sbjct: 510 GHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNP 569

Query: 507 NVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAK 557
            V+T+N L+ G  +N +     ELL +M    + + PDDTT+  +++ +AK
Sbjct: 570 TVLTYNALVQGLCKNQEGDLAEELLKEMV--SKGMTPDDTTYFTLIEGIAK 618



 Score =  225 bits (574), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 139/469 (29%), Positives = 237/469 (50%), Gaps = 19/469 (4%)

Query: 57  NEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNIL 116
           +EA   F  M      P I + N L     K    +A    Y ++  + +     T NI+
Sbjct: 168 DEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIM 227

Query: 117 INCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHK 176
           IN        LC E ++K+A     +M   GV+P+++TY T+++G+C +G +  A  +  
Sbjct: 228 INV-------LCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILT 280

Query: 177 KMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIH 236
            M     E       + F+Y  +I  +CK+G +++A ++F EM  +G+ P+ V+  TLI 
Sbjct: 281 TMKRQKIE------PDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLID 334

Query: 237 GFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNP 296
           GFC  GN +  +    EML  G  P + T+N +I  L    + +EA  +++ + ++G++P
Sbjct: 335 GFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISP 394

Query: 297 DRFTYNSLMDGYCLVGRIDTAREIFL---SMHSKGCKHTVVSYNILINGYCKILNVEEAM 353
           D  TYN L++GYC   R   A++ FL    M + G K T  +Y  L++   K   ++EA 
Sbjct: 395 DAITYNILINGYC---RCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEAD 451

Query: 354 SLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGL 413
            L+++I S GV    I +N L+ G         A +L  +M    V PD  T+N ++ G 
Sbjct: 452 DLFKKITSEGVLPDAIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGH 511

Query: 414 CKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTV 473
           C+   V+EA +LF  ++    +     FN LI G  + G + +A+ + +++   G  PTV
Sbjct: 512 CREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTV 571

Query: 474 VTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNN 522
           +TY+ ++ GLC+  + + A + L  M   G  P+  T+ TL+ G  + N
Sbjct: 572 LTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAKVN 620



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 111/372 (29%), Positives = 183/372 (49%), Gaps = 4/372 (1%)

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
           +F Y  +I S C     D+A E F  MK +G+ P +  C +L+  F      E    L+ 
Sbjct: 153 VFDY--LIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYA 210

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
           EM  L  + ++ TFN+MI+ LCK GK+ +A   +  M   G+ P+  TYN+++ GYC  G
Sbjct: 211 EMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSG 270

Query: 313 RIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYN 372
           R++ A  I  +M  +  +    +Y  LI+G CK   +EEA  ++ +++  G+R + + YN
Sbjct: 271 RVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYN 330

Query: 373 TLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMN 432
           TL+ G    G    A    DEM    + P +STYN LI  L       EA  +   ++  
Sbjct: 331 TLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEK 390

Query: 433 KFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKA 492
                   +N LI+G C+      A+ L  ++   G+ PT  TY+ ++H L +K ++++A
Sbjct: 391 GISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEA 450

Query: 493 NDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVV 552
           +D    +   G  P+ + FN L+ G   N+      ELL  M      + PD+ TF+ ++
Sbjct: 451 DDLFKKITSEGVLPDAIMFNALIDGHCSNSNVKGAFELLKDMD--RMKVPPDEVTFNTIM 508

Query: 553 DLLAKDEKYHEC 564
               ++ K  E 
Sbjct: 509 QGHCREGKVEEA 520



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 116/402 (28%), Positives = 192/402 (47%), Gaps = 38/402 (9%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CK G   L +A+ F G+M      P I ++N +      +   +A  +    +    + P
Sbjct: 232 CKEG--KLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEP 289

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           D  T   LI+       G+C + R++EA+ +F+ M+  G+RP  + Y TLI+GFC  GNL
Sbjct: 290 DSFTYGSLIS-------GMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNL 342

Query: 169 SVALRLHKKMVSGDYE------NGLIS-----------------------KTNIFSYSII 199
            +A     +M+           N LI                          +  +Y+I+
Sbjct: 343 DMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNIL 402

Query: 200 IDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGP 259
           I+  C+     KA  L  EM   GI P     T+L+H        +E + LF ++   G 
Sbjct: 403 INGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGV 462

Query: 260 RPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTARE 319
            P+ + FN +ID  C    +  A  LL+ M +  + PD  T+N++M G+C  G+++ ARE
Sbjct: 463 LPDAIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARE 522

Query: 320 IFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLF 379
           +F  M  +G K   +S+N LI+GY +  ++++A  +  +++  G   TV+TYN L+ GL 
Sbjct: 523 LFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLC 582

Query: 380 QAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQE 421
           +  +   A++L  EM    + PD +TY  LI+G+ K N   E
Sbjct: 583 KNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAKVNIPDE 624



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 85/306 (27%), Positives = 157/306 (51%), Gaps = 2/306 (0%)

Query: 264 LTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLS 323
           + F+ +I   C   + +EA      M ++G+ P   T NSL+  +  + R + A  ++  
Sbjct: 152 IVFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAE 211

Query: 324 MHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQ 383
           M     K +V ++NI+IN  CK   +++A      + ++GV+  ++TYNT++ G   +G+
Sbjct: 212 MFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGR 271

Query: 384 AGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNC 443
              A  +   MK   +EPD  TY  LI G+CK   ++EA K+F  +          I+N 
Sbjct: 272 VEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNT 331

Query: 444 LIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNG 503
           LIDG C  G LD A     ++ +KG+ PT+ TY+ +IH L  + + ++A   +  +++ G
Sbjct: 332 LIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKG 391

Query: 504 CAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
            +P+ +T+N L++G+ +     K   L  +M      + P   T++ ++ +L+K  +  E
Sbjct: 392 ISPDAITYNILINGYCRCANAKKAFLLHDEML--ASGIKPTKKTYTSLLHVLSKKNRMKE 449

Query: 564 CSAVSK 569
              + K
Sbjct: 450 ADDLFK 455


>gi|302770561|ref|XP_002968699.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
 gi|300163204|gb|EFJ29815.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
          Length = 544

 Score =  244 bits (624), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 160/554 (28%), Positives = 264/554 (47%), Gaps = 85/554 (15%)

Query: 79  NLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATW 138
           N L   +   R +D  +  ++++++    P+  T N+LI       RG C   ++ +A  
Sbjct: 1   NALLSGLVSARKHDQALRLFKEVLAGLFAPNAHTYNVLI-------RGFCKGGQMHQAVS 53

Query: 139 LFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDY------ENGLI---- 188
           +F +M + G+ P+  T  TL+ G C  G +S AL+L ++M +G +       N L+    
Sbjct: 54  VFSDMKSSGLLPNASTMNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFF 113

Query: 189 -------------------SKTNIFSYSIIIDSLCKEG----LVDKAKELFLEMKGRGIN 225
                              S     +Y++++  LC E      +++A E F EMK  G+ 
Sbjct: 114 MAGRVRDALAHLQDMRKSSSSVATGTYNLVLKGLCWENKSANRLEQAMEFFKEMKASGVE 173

Query: 226 P-------------------------AVVVCT-------TLIHGFCCAGNWEEVNGLFIE 253
           P                         + + C+        L+ G+C  G   E   L  E
Sbjct: 174 PDLESYHILLSALSDSGRMAEAHALFSAMTCSPDIMTYNVLMDGYCKIGQTYEAQSLMKE 233

Query: 254 MLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGR 313
           +L  G  PN+ T++++I+C CK  K+ EA  +   MI+    P+  T+N+L+ G+C  G 
Sbjct: 234 ILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGM 293

Query: 314 IDTAREIFLSMHSKGCKHTVVSYNILINGYCKILN-VEEAMSLYRQIISNGVRQTVITYN 372
           ++ A ++F  M   GCK T+V+YN LI+  CK    V  A+ L+ ++   G+  T++TYN
Sbjct: 294 LEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYN 353

Query: 373 TLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMN 432
           +L+ G   A +   A + FDEM+     P++ TY+ILIDGLCK   ++EA K    ++ +
Sbjct: 354 SLIQGFCDARRLSEAMQYFDEME-GKCAPNVITYSILIDGLCKVRRMKEAAKTLEDMKAH 412

Query: 433 KFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKA 492
            +   +  +  LI+G CK G L +A   F K+   G  P  V ++ +I GLC   K E+A
Sbjct: 413 GYTPTVVTYGGLINGFCKCGELKSALLFFEKMKLAGCAPNTVIFNTLIDGLC---KAERA 469

Query: 493 ND---FLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFS 549
           ND    L +M   GC P+V+T+N L+ G    N+      L   MA       P+ TTF+
Sbjct: 470 NDGLRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQRLFDGMA-----CAPNVTTFN 524

Query: 550 IVVDLLAKDEKYHE 563
            ++  L   +K  E
Sbjct: 525 FLIRGLCAQKKVEE 538



 Score =  236 bits (601), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 143/436 (32%), Positives = 229/436 (52%), Gaps = 25/436 (5%)

Query: 66  MTHMQPSPPISSFNLLF-GAVAKNR---HYDAVISFYRKLVSIGLLPDFLTLNILINCFG 121
           M     S    ++NL+  G   +N+     +  + F++++ + G+ PD  + +IL++   
Sbjct: 128 MRKSSSSVATGTYNLVLKGLCWENKSANRLEQAMEFFKEMKASGVEPDLESYHILLSALS 187

Query: 122 NKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSG 181
           +         R+ EA  LF  M      PD++TY  L++G+C+ G    A  L K+++  
Sbjct: 188 D-------SGRMAEAHALFSAMT---CSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILKA 237

Query: 182 DYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCA 241
            YE       N+F+YSIII+  CK   V++A E+F++M      P  V   TLI GFC A
Sbjct: 238 GYE------PNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKA 291

Query: 242 GNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKG-GKINEANGLLELMIQRGLNPDRFT 300
           G  E+   LF EM  +G +  ++T+N +ID LCK  G +  A  L   +   GL P   T
Sbjct: 292 GMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVT 351

Query: 301 YNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQII 360
           YNSL+ G+C   R+  A + F  M  K C   V++Y+ILI+G CK+  ++EA      + 
Sbjct: 352 YNSLIQGFCDARRLSEAMQYFDEMEGK-CAPNVITYSILIDGLCKVRRMKEAAKTLEDMK 410

Query: 361 SNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQ 420
           ++G   TV+TY  L++G  + G+   A   F++MKL    P+   +N LIDGLCK     
Sbjct: 411 AHGYTPTVVTYGGLINGFCKCGELKSALLFFEKMKLAGCAPNTVIFNTLIDGLCKAERAN 470

Query: 421 EAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMI 480
           + ++L   +     +  +  +NCLI GLC A R+++A  LF  +      P V T++ +I
Sbjct: 471 DGLRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQRLFDGM---ACAPNVTTFNFLI 527

Query: 481 HGLCRKGKLEKANDFL 496
            GLC + K+E+A + L
Sbjct: 528 RGLCAQKKVEEARNIL 543



 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 128/368 (34%), Positives = 193/368 (52%), Gaps = 21/368 (5%)

Query: 56  LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNI 115
           + EA   F  MT    SP I ++N+L     K        S  ++++  G  P+  T +I
Sbjct: 192 MAEAHALFSAMT---CSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSI 248

Query: 116 LINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLH 175
           +INC+       C  ++++EA  +F  MI     P+ +T+ TLI GFC+ G L  A++L 
Sbjct: 249 IINCY-------CKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLF 301

Query: 176 KKMVSGDYENGLISKTNIFSYSIIIDSLCKE-GLVDKAKELFLEMKGRGINPAVVVCTTL 234
            +M        +  K  I +Y+ +IDSLCK+ G V  A +LF +++G G+ P +V   +L
Sbjct: 302 AEM------EKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSL 355

Query: 235 IHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGL 294
           I GFC A    E    F EM +    PN++T++++ID LCK  ++ EA   LE M   G 
Sbjct: 356 IQGFCDARRLSEAMQYFDEM-EGKCAPNVITYSILIDGLCKVRRMKEAAKTLEDMKAHGY 414

Query: 295 NPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMS 354
            P   TY  L++G+C  G + +A   F  M   GC    V +N LI+G CK     + + 
Sbjct: 415 TPTVVTYGGLINGFCKCGELKSALLFFEKMKLAGCAPNTVIFNTLIDGLCKAERANDGLR 474

Query: 355 LYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLC 414
           L   + + G +  VITYN L+SGL  A +   AQ+LFD M      P+++T+N LI GLC
Sbjct: 475 LLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQRLFDGMA---CAPNVTTFNFLIRGLC 531

Query: 415 KNNCVQEA 422
               V+EA
Sbjct: 532 AQKKVEEA 539



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 88/277 (31%), Positives = 120/277 (43%), Gaps = 43/277 (15%)

Query: 41  LNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRH--YDAVISFY 98
            N  +   CK+G+  L +A   F  M  +     I ++N L  ++ K R   Y AV   +
Sbjct: 281 FNTLIAGFCKAGM--LEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAV-DLF 337

Query: 99  RKLVSIGLLPDFLTLNILINCFGNKER---------------------------GLCVEN 131
            KL   GL P  +T N LI  F +  R                           GLC   
Sbjct: 338 NKLEGAGLTPTIVTYNSLIQGFCDARRLSEAMQYFDEMEGKCAPNVITYSILIDGLCKVR 397

Query: 132 RIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKM-VSGDYENGLISK 190
           R+KEA    ++M A G  P V+TYG LINGFC+ G L  AL   +KM ++G   N +I  
Sbjct: 398 RMKEAAKTLEDMKAHGYTPTVVTYGGLINGFCKCGELKSALLFFEKMKLAGCAPNTVI-- 455

Query: 191 TNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGL 250
                ++ +ID LCK    +    L   M   G  P V+    LI G C A   E+   L
Sbjct: 456 -----FNTLIDGLCKAERANDGLRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQRL 510

Query: 251 FIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLE 287
           F  M      PN+ TFN +I  LC   K+ EA  +L+
Sbjct: 511 FDGM---ACAPNVTTFNFLIRGLCAQKKVEEARNILD 544


>gi|380875521|gb|AFF27500.1| PPR domain-containing protein [Oryza sativa Indica Group]
          Length = 742

 Score =  244 bits (623), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 139/457 (30%), Positives = 245/457 (53%), Gaps = 13/457 (2%)

Query: 78  FNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEAT 137
           +N L   + +      + S Y ++ + G+ PD +T N L+       + LC  ++++ A 
Sbjct: 149 YNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLM-------KALCRAHQVRTAV 201

Query: 138 WLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYS 197
            + + M + GV PD  T+ TL+ GF   G++  ALR+  +M+    E G  S T + + +
Sbjct: 202 LMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARML----EMG-CSATKV-TVN 255

Query: 198 IIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDL 257
           ++I+  CK G V+ A     +    G  P  +   T ++G C   +      +   M+  
Sbjct: 256 VLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQE 315

Query: 258 GPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTA 317
           G  P++ T+N++++CLCK G++ EA G+L  M+ RG  PD  T+N+L+   C   R++ A
Sbjct: 316 GHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEA 375

Query: 318 REIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSG 377
            ++   +  KG    V ++NILIN  CK+ +   A+ L+ ++ ++G     +TYNTL+  
Sbjct: 376 LDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDN 435

Query: 378 LFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFG 437
           L   G+ G A  L  +M+         TYN +IDGLCK   ++EA ++F  +++      
Sbjct: 436 LCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRN 495

Query: 438 IEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLL 497
              FN LIDGLCK  ++D+A+ L +++  +GL P  +TY+ ++   C++G ++KA D L 
Sbjct: 496 AITFNTLIDGLCKDKKIDDAFGLINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILE 555

Query: 498 YMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKM 534
            M  NG   +VVT+ TL++G  +  +T   +++L  M
Sbjct: 556 TMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGM 592



 Score =  244 bits (622), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 152/539 (28%), Positives = 255/539 (47%), Gaps = 51/539 (9%)

Query: 17  SKVKLSSLFKSPRQIAAVSSPETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPIS 76
           SK+KL     S      +       N  +   C++    +  A      M+    +P  +
Sbjct: 160 SKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAH--QVRTAVLMLEEMSSRGVAPDET 217

Query: 77  SFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEA 136
           +F  L     +    +A +    +++ +G     +T+N+LIN       G C   R+++A
Sbjct: 218 TFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLIN-------GYCKLGRVEDA 270

Query: 137 TWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSY 196
               +  IA G  PD ITY T +NG C+  ++  AL++   MV   ++       ++F+Y
Sbjct: 271 LGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHD------PDVFTY 324

Query: 197 SIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLD 256
           +I+++ LCK G +++AK +  +M  RG  P +    TLI   C     EE   L  ++  
Sbjct: 325 NIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTV 384

Query: 257 LGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDT 316
            G  P++ TFN++I+ LCK G  + A  L E M   G  PD  TYN+L+D  C +G++  
Sbjct: 385 KGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGK 444

Query: 317 AREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLS 376
           A ++   M S GC  + ++YN +I+G CK + +EEA  ++ Q+   G+ +  IT+NTL+ 
Sbjct: 445 ALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLID 504

Query: 377 GLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEF 436
           GL +  +   A  L ++M    ++P+  TYN ++   CK   +++A  +   +  N FE 
Sbjct: 505 GLCKDKKIDDAFGLINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEV 564

Query: 437 GIEIFNCLIDGLCKAGR-----------------------------------LDNAWELF 461
            +  +  LI+GLCKAGR                                   + +A  LF
Sbjct: 565 DVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLF 624

Query: 462 HKLPQKGLVPTVVTYSIMIHGLCR-KGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFL 519
            ++ + G  P  +TY I+  GLCR  G +++A DF+L M   G  P   +F  L  G L
Sbjct: 625 REMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEGLL 683



 Score =  202 bits (513), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 132/400 (33%), Positives = 204/400 (51%), Gaps = 8/400 (2%)

Query: 171 ALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGR--GINPAV 228
           AL L K +V+     G   K  +      +DS   + L D A +L L       GI    
Sbjct: 89  ALDLMKVLVAEMRREGHQVKLGVVHS--FLDSYEGQQLFDDAVDLILNQLQPLFGIQADT 146

Query: 229 VVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLEL 288
           VV   L++        + +  ++ EM   G +P+++TFN ++  LC+  ++  A  +LE 
Sbjct: 147 VVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEE 206

Query: 289 MIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILN 348
           M  RG+ PD  T+ +LM G+   G I+ A  +   M   GC  T V+ N+LINGYCK+  
Sbjct: 207 MSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGR 266

Query: 349 VEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNI 408
           VE+A+   +Q I++G     ITYNT ++GL Q    G+A K+ D M     +PD+ TYNI
Sbjct: 267 VEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNI 326

Query: 409 LIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKG 468
           +++ LCKN  ++EA  + + +        I  FN LI  LC   RL+ A +L  ++  KG
Sbjct: 327 VVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKG 386

Query: 469 LVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVV 528
           + P V T++I+I+ LC+ G    A      M+ +GC P+ VT+NTL+       K  K +
Sbjct: 387 VSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKAL 446

Query: 529 ELLHKMAEPERNLVPDDT-TFSIVVDLLAKDEKYHECSAV 567
           +LL  M   E    P  T T++ ++D L K  +  E   V
Sbjct: 447 DLLKDM---ESTGCPRSTITYNTIIDGLCKKMRIEEAEEV 483



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 136/505 (26%), Positives = 251/505 (49%), Gaps = 29/505 (5%)

Query: 66  MTHMQPSP-PISSFNLLFGAVAKNRH------YDAVISFYRKLVSIGLLPDFLTLNILIN 118
           +T ++  P P ++  +L  A+A++        Y+ +I   RKL ++G L     L   + 
Sbjct: 45  LTALREQPDPDAALRMLNAALARDDFAPGPEVYEEII---RKLGAVGALDLMKVLVAEMR 101

Query: 119 CFGNKERGLCVENRIK--EATWLFKNMIA---------FGVRPDVITYGTLINGFCRTGN 167
             G++ +   V + +   E   LF + +          FG++ D + Y  L+N       
Sbjct: 102 REGHQVKLGVVHSFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSK 161

Query: 168 LSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPA 227
           + +   ++ +M +     G+  K ++ +++ ++ +LC+   V  A  +  EM  RG+ P 
Sbjct: 162 MKLLESVYSEMGA----RGI--KPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPD 215

Query: 228 VVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLE 287
               TTL+ GF   G+ E    +   ML++G     +T NV+I+  CK G++ +A G ++
Sbjct: 216 ETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQ 275

Query: 288 LMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKIL 347
             I  G  PD+ TYN+ ++G C    +  A ++   M  +G    V +YNI++N  CK  
Sbjct: 276 QEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNG 335

Query: 348 NVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYN 407
            +EEA  +  Q++  G    + T+NTL++ L    +   A  L  ++ +  V PD+ T+N
Sbjct: 336 QLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFN 395

Query: 408 ILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQK 467
           ILI+ LCK      A++LF  ++ +        +N LID LC  G+L  A +L   +   
Sbjct: 396 ILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMEST 455

Query: 468 GLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKV 527
           G   + +TY+ +I GLC+K ++E+A +    M+  G + N +TFNTL+ G  ++ K    
Sbjct: 456 GCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDA 515

Query: 528 VELLHKMAEPERNLVPDDTTFSIVV 552
             L+++M      L P++ T++ ++
Sbjct: 516 FGLINQMI--SEGLQPNNITYNSIL 538



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 107/375 (28%), Positives = 185/375 (49%), Gaps = 2/375 (0%)

Query: 190 KTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNG 249
           + +   Y+ +++ L +   +   + ++ EM  RGI P VV   TL+   C A        
Sbjct: 143 QADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVL 202

Query: 250 LFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYC 309
           +  EM   G  P+  TF  ++    + G I  A  +   M++ G +  + T N L++GYC
Sbjct: 203 MLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYC 262

Query: 310 LVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVI 369
            +GR++ A        + G +   ++YN  +NG C+  +V  A+ +   ++  G    V 
Sbjct: 263 KLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVF 322

Query: 370 TYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHML 429
           TYN +++ L + GQ   A+ + ++M      PD++T+N LI  LC  N ++EA+ L   +
Sbjct: 323 TYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQV 382

Query: 430 EMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKL 489
            +      +  FN LI+ LCK G    A  LF ++   G  P  VTY+ +I  LC  GKL
Sbjct: 383 TVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKL 442

Query: 490 EKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFS 549
            KA D L  ME  GC  + +T+NT++ G  +  +  +  E+  +M    + +  +  TF+
Sbjct: 443 GKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQM--DLQGISRNAITFN 500

Query: 550 IVVDLLAKDEKYHEC 564
            ++D L KD+K  + 
Sbjct: 501 TLIDGLCKDKKIDDA 515


>gi|222628664|gb|EEE60796.1| hypothetical protein OsJ_14385 [Oryza sativa Japonica Group]
          Length = 808

 Score =  244 bits (623), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 158/555 (28%), Positives = 276/555 (49%), Gaps = 20/555 (3%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
           N  +H    SG+   NE+   F  M+     P + + N    A+ K+   +     +  +
Sbjct: 243 NSLIHGYSISGM--WNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSM 300

Query: 102 VSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLING 161
           V  G  PD ++ + +++ +         ++ + +   +F  M+  G+ P+   +  LIN 
Sbjct: 301 VLKGPKPDIISYSTMLHGYAT-----ATDSCLADVHNIFNLMLTKGIAPNKHVFNILINA 355

Query: 162 FCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKG 221
           + R G +  A+ + + M       G+I  T   +++ +I SLC+ G +D A   F  M  
Sbjct: 356 YARCGMMDKAMLIFEDM----QNKGMIPDT--VTFATVISSLCRIGRLDDALHKFNHMVD 409

Query: 222 RGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLG-PRPNLLTFNVMIDCLCKGGKIN 280
            G+ P+  V   LI G C  G   +   L  EM++   P P +  F+ +I+ LCK G++ 
Sbjct: 410 IGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVA 469

Query: 281 EANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILI 340
           E   ++++M+Q G  P+  T+NSLM+GYCLVG ++ A  +  +M S G +     Y  L+
Sbjct: 470 EGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLV 529

Query: 341 NGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVE 400
           +GYCK   +++A++++R ++  GV+ T + Y+ +L GLFQA +   A+K+F EM      
Sbjct: 530 DGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTT 589

Query: 401 PDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWEL 460
             + TY +++ GLC+NNC  EA  L   L     +F I  FN +I  + K GR   A EL
Sbjct: 590 VSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKEL 649

Query: 461 FHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQ 520
           F  +   GLVP + TYS+MI  L ++   E+A++  + +EK+G A +    N ++   L 
Sbjct: 650 FDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIVRMLLN 709

Query: 521 NNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKSSYRACLYV-- 578
             + +K    L  +   E NL  + +T S++  L +++         + +   A L +  
Sbjct: 710 KAEVAKASNYLSIIG--ENNLTLEASTISLLASLFSREGMIKGLFGTAPAPAPALLELEL 767

Query: 579 --TIFQPSSLGSMIG 591
             T+  P  LG  +G
Sbjct: 768 SQTVSAPPKLGVELG 782



 Score =  205 bits (521), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 140/512 (27%), Positives = 255/512 (49%), Gaps = 18/512 (3%)

Query: 56  LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNI 115
           +++A   F  M      P I   N +   + K +  D   S  +K+V  G+ PD  T ++
Sbjct: 150 VDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSL 209

Query: 116 LINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLH 175
           +I+       GLC    + +A  + + M+  G RP+ ITY +LI+G+  +G  + ++R+ 
Sbjct: 210 IID-------GLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVF 262

Query: 176 KKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLI 235
           K+M S     G+I   +  + +  I +L K G  ++AK +F  M  +G  P ++  +T++
Sbjct: 263 KQMSSC----GVIPTVD--NCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTML 316

Query: 236 HGFCCAGN--WEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRG 293
           HG+  A +    +V+ +F  ML  G  PN   FN++I+   + G +++A  + E M  +G
Sbjct: 317 HGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKG 376

Query: 294 LNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAM 353
           + PD  T+ +++   C +GR+D A   F  M   G   +   Y  LI G C    + +A 
Sbjct: 377 MIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAK 436

Query: 354 SLYRQIISNGVRQTVITY-NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDG 412
            L  ++++  +    + Y +++++ L + G+    + + D M      P++ T+N L++G
Sbjct: 437 ELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEG 496

Query: 413 LCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPT 472
            C    ++EA  L   +     E    I+  L+DG CK GR+D+A  +F  +  KG+ PT
Sbjct: 497 YCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPT 556

Query: 473 VVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLH 532
            V YSI++HGL +  +   A      M ++G   ++ T+  ++ G  +NN T +   LL 
Sbjct: 557 SVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLE 616

Query: 533 KMAEPERNLVPDDTTFSIVVDLLAKDEKYHEC 564
           K+     N+  D  TF+IV+  + K  +  E 
Sbjct: 617 KLF--AMNVKFDIITFNIVISAMFKVGRRQEA 646



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 132/474 (27%), Positives = 234/474 (49%), Gaps = 22/474 (4%)

Query: 72  SPP-ISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVE 130
           SPP I ++N+L     +    D  ++   +L+  GL PD  + +++         G   +
Sbjct: 96  SPPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYSLIY--------GFVKD 147

Query: 131 NRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISK 190
             + +A  LF  M+  GV P ++   ++I   C+   +  A  + +KMV    ++G+   
Sbjct: 148 GEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMV----DSGI--A 201

Query: 191 TNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGL 250
            ++F+YS+IID LCK   +DKA+ +  +M   G  P  +   +LIHG+  +G W E   +
Sbjct: 202 PDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRV 261

Query: 251 FIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCL 310
           F +M   G  P +   N  I  L K G+ NEA  + + M+ +G  PD  +Y++++ GY  
Sbjct: 262 FKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYAT 321

Query: 311 VGR--IDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTV 368
                +     IF  M +KG       +NILIN Y +   +++AM ++  + + G+    
Sbjct: 322 ATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDT 381

Query: 369 ITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLF-H 427
           +T+ T++S L + G+   A   F+ M    V P  + Y  LI G C +  + +A +L   
Sbjct: 382 VTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISE 441

Query: 428 MLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKG 487
           M+  +    G++ F+ +I+ LCK GR+    ++   + Q G  P VVT++ ++ G C  G
Sbjct: 442 MMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVG 501

Query: 488 KLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVV----ELLHKMAEP 537
            +E+A   L  M   G  PN   + TL+ G+ +N +    +    ++LHK  +P
Sbjct: 502 NMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKP 555



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 133/480 (27%), Positives = 235/480 (48%), Gaps = 53/480 (11%)

Query: 150 PDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLV 209
           P + TY  LI+ + R     + L +  +++    +NGL    + FSYS+I     K+G V
Sbjct: 98  PTIHTYNILIDCYRRVHRPDLGLAIVGRLL----KNGL--GPDDFSYSLIY-GFVKDGEV 150

Query: 210 DKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVM 269
           DKA  LFLEM  +G+ P +++C ++I   C     ++   +  +M+D G  P+L T++++
Sbjct: 151 DKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLI 210

Query: 270 IDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV------------------ 311
           ID LCK   +++A  +LE M++ G  P+  TYNSL+ GY +                   
Sbjct: 211 IDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGV 270

Query: 312 -----------------GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILN--VEEA 352
                            GR + A+ IF SM  KG K  ++SY+ +++GY    +  + + 
Sbjct: 271 IPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADV 330

Query: 353 MSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDG 412
            +++  +++ G+      +N L++   + G    A  +F++M+   + PD  T+  +I  
Sbjct: 331 HNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISS 390

Query: 413 LCKNNCVQEAVKLF-HMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVP 471
           LC+   + +A+  F HM+++        ++ CLI G C  G L  A EL  ++  K + P
Sbjct: 391 LCRIGRLDDALHKFNHMVDIG-VPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPP 449

Query: 472 TVVTY-SIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVEL 530
             V Y S +I+ LC++G++ +  D +  M + G  PNVVTFN+LM G+       +   L
Sbjct: 450 PGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFAL 509

Query: 531 LHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKSSYRACLYVTIFQPSSLGSMI 590
           L  MA     + P+   +  +VD   K+ +  +   V    +R  L+  +   S L S+I
Sbjct: 510 LDAMA--SIGIEPNCYIYGTLVDGYCKNGRIDDALTV----FRDMLHKGVKPTSVLYSII 563


>gi|297816676|ref|XP_002876221.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297322059|gb|EFH52480.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 754

 Score =  244 bits (623), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 148/472 (31%), Positives = 244/472 (51%), Gaps = 14/472 (2%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
           P    +N +   +    +   V   + K+   G+ PD  T N+LI       + LC  ++
Sbjct: 152 PDTHFYNRMLNLLVDGNNLKLVEIAHAKMSVWGIKPDVSTFNVLI-------KALCRAHQ 204

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
           ++ A  + ++M ++G+ PD  T+ T++ G+   G+L  ALR+ ++MV    E G  S +N
Sbjct: 205 LRPAILMLEDMPSYGLVPDEKTFTTIMQGYIEEGDLDGALRIREQMV----EFG-CSWSN 259

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGR-GINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
           + S ++I+   CKEG V+ A     EM  + G  P      TL++G C AG+ +    + 
Sbjct: 260 V-SVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIM 318

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
             ML  G  P++ T+N +I  LCK G++ EA   L+ MI R  +P+  TYN+L+   C  
Sbjct: 319 DVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEFLDQMITRDCSPNTVTYNTLISTLCKE 378

Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
            +++ A E+   + SKG    V ++N LI G C   N   AM L+ ++ S G      TY
Sbjct: 379 NQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTY 438

Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
           N L+  L   G+   A  +  +M+L      + TYN LIDG CK N ++EA ++F  +E+
Sbjct: 439 NMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKIREAEEIFDEMEV 498

Query: 432 NKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEK 491
           +        +N LIDGLCK+ R+++A +L  ++  +G  P   TY+ ++   CR G ++K
Sbjct: 499 HGVSRNSVTYNTLIDGLCKSRRVEDASQLMDQMIMEGQKPDKFTYNSLLTHFCRGGDIKK 558

Query: 492 ANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVP 543
           A D +  M  NGC P++VT+ TL+ G  +  +     +LL  +      L P
Sbjct: 559 AADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGIALTP 610



 Score =  236 bits (602), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 152/501 (30%), Positives = 240/501 (47%), Gaps = 41/501 (8%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCF---GNKE----- 124
           P +S+FN+L  A+ +       I     + S GL+PD  T   ++  +   G+ +     
Sbjct: 187 PDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTIMQGYIEEGDLDGALRI 246

Query: 125 --------------------RGLCVENRIKEATWLFKNMI-AFGVRPDVITYGTLINGFC 163
                                G C E R+++A    + M    G  PD  T+ TL+NG C
Sbjct: 247 REQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLC 306

Query: 164 RTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRG 223
           + G++  A+ +   M+   Y+       ++++Y+ +I  LCK G V +A E   +M  R 
Sbjct: 307 KAGHVKHAIEIMDVMLQEGYD------PDVYTYNSVISGLCKLGEVKEAVEFLDQMITRD 360

Query: 224 INPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEAN 283
            +P  V   TLI   C     EE   L   +   G  P++ TFN +I  LC       A 
Sbjct: 361 CSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAM 420

Query: 284 GLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGY 343
            L E M  +G  PD FTYN L+D  C  G++D A  +   M   GC  +V++YN LI+G+
Sbjct: 421 ELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGF 480

Query: 344 CKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDL 403
           CK   + EA  ++ ++  +GV +  +TYNTL+ GL ++ +   A +L D+M +   +PD 
Sbjct: 481 CKANKIREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDASQLMDQMIMEGQKPDK 540

Query: 404 STYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHK 463
            TYN L+   C+   +++A  +   +  N  E  I  +  LI GLCKAGR++ A +L   
Sbjct: 541 FTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRS 600

Query: 464 LPQKGLVPTVVTYSIMIHGLCRKGKLEKA-NDFLLYMEKNGCAPNVVTFNTLMHGFLQNN 522
           +  KG+  T   Y+ +I GL RK K  +A N F   +E+N  AP+ V++  +  G     
Sbjct: 601 IQMKGIALTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAAPDAVSYRIVFRGLCNGG 660

Query: 523 KTSK-----VVELLHKMAEPE 538
              +     +VELL K   PE
Sbjct: 661 GPIREAVDFLVELLEKGFVPE 681



 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 137/469 (29%), Positives = 222/469 (47%), Gaps = 47/469 (10%)

Query: 138 WLFKNMIAFGVRPD-----------------------------------VITYGTLINGF 162
           W+  +   FG++PD                                   V T+  LI   
Sbjct: 143 WMIDD---FGLKPDTHFYNRMLNLLVDGNNLKLVEIAHAKMSVWGIKPDVSTFNVLIKAL 199

Query: 163 CRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGR 222
           CR   L  A+ + + M S     GL+     F  + I+    +EG +D A  +  +M   
Sbjct: 200 CRAHQLRPAILMLEDMPS----YGLVPDEKTF--TTIMQGYIEEGDLDGALRIREQMVEF 253

Query: 223 GINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDL-GPRPNLLTFNVMIDCLCKGGKINE 281
           G + + V    ++HGFC  G  E+      EM +  G  P+  TFN +++ LCK G +  
Sbjct: 254 GCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKH 313

Query: 282 ANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILIN 341
           A  ++++M+Q G +PD +TYNS++ G C +G +  A E    M ++ C    V+YN LI+
Sbjct: 314 AIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEFLDQMITRDCSPNTVTYNTLIS 373

Query: 342 GYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEP 401
             CK   VEEA  L R + S G+   V T+N+L+ GL        A +LF+EM+    EP
Sbjct: 374 TLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEP 433

Query: 402 DLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELF 461
           D  TYN+LID LC    + EA+ +   +E++     +  +N LIDG CKA ++  A E+F
Sbjct: 434 DEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKIREAEEIF 493

Query: 462 HKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQN 521
            ++   G+    VTY+ +I GLC+  ++E A+  +  M   G  P+  T+N+L+  F + 
Sbjct: 494 DEMEVHGVSRNSVTYNTLIDGLCKSRRVEDASQLMDQMIMEGQKPDKFTYNSLLTHFCRG 553

Query: 522 NKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKS 570
               K  +++  M        PD  T+  ++  L K  +    S + +S
Sbjct: 554 GDIKKAADIVQAMT--SNGCEPDIVTYGTLISGLCKAGRVEVASKLLRS 600



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 124/414 (29%), Positives = 201/414 (48%), Gaps = 25/414 (6%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CK G   + EA  F   M     SP   ++N L   + K    +      R L S G+LP
Sbjct: 341 CKLG--EVKEAVEFLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILP 398

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           D  T N LI       +GLC+    + A  LF+ M + G  PD  TY  LI+  C  G L
Sbjct: 399 DVCTFNSLI-------QGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKL 451

Query: 169 SVALRLHKKM-VSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPA 227
             AL + K+M +SG          ++ +Y+ +ID  CK   + +A+E+F EM+  G++  
Sbjct: 452 DEALNMLKQMELSG-------CARSVITYNTLIDGFCKANKIREAEEIFDEMEVHGVSRN 504

Query: 228 VVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLE 287
            V   TLI G C +   E+ + L  +M+  G +P+  T+N ++   C+GG I +A  +++
Sbjct: 505 SVTYNTLIDGLCKSRRVEDASQLMDQMIMEGQKPDKFTYNSLLTHFCRGGDIKKAADIVQ 564

Query: 288 LMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKIL 347
            M   G  PD  TY +L+ G C  GR++ A ++  S+  KG   T  +YN +I G  +  
Sbjct: 565 AMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGIALTPHAYNPVIQGLFRKR 624

Query: 348 NVEEAMSLYRQII-SNGVRQTVITYNTLLSGLFQAGQAGYAQKLFD---EMKLYNVEPDL 403
              EA++L+R+++  N      ++Y  +  GL   G  G  ++  D   E+      P+ 
Sbjct: 625 KTTEAINLFREMLEQNEAAPDAVSYRIVFRGLCNGG--GPIREAVDFLVELLEKGFVPEF 682

Query: 404 STYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNA 457
           S+  +L +GL   +  +  VKL +M+ M K  F  E  + ++ GL K  +  +A
Sbjct: 683 SSLYMLAEGLLTLSMEETLVKLVNMV-MQKARFSEEEVS-MVKGLLKIRKFQDA 734



 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 135/487 (27%), Positives = 213/487 (43%), Gaps = 89/487 (18%)

Query: 158 LINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFS-----YSIIIDSLCKEGLVDKA 212
           L++      + S ALRL            L SK   FS     Y  I+  L + G  D  
Sbjct: 53  LLDSLRSQADDSAALRLF----------NLASKKPNFSPEPALYEEILLRLGRSGSFDDM 102

Query: 213 KELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLD---------------- 256
           +++  +MK  G          LI  +      +E+ G+   M+D                
Sbjct: 103 RKILEDMKNSGCEMGTSPFLILIESYAQFELQDEILGVVHWMIDDFGLKPDTHFYNRMLN 162

Query: 257 --------------------LGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNP 296
                                G +P++ TFNV+I  LC+  ++  A  +LE M   GL P
Sbjct: 163 LLVDGNNLKLVEIAHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVP 222

Query: 297 DRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLY 356
           D  T+ ++M GY   G +D A  I   M   GC  + VS N++++G+CK   VE+A++  
Sbjct: 223 DEKTFTTIMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFI 282

Query: 357 RQ------------------------------------IISNGVRQTVITYNTLLSGLFQ 380
           ++                                    ++  G    V TYN+++SGL +
Sbjct: 283 QEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCK 342

Query: 381 AGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEI 440
            G+   A +  D+M   +  P+  TYN LI  LCK N V+EA +L  +L        +  
Sbjct: 343 LGEVKEAVEFLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCT 402

Query: 441 FNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYME 500
           FN LI GLC       A ELF ++  KG  P   TY+++I  LC KGKL++A + L  ME
Sbjct: 403 FNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQME 462

Query: 501 KNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEK 560
            +GCA +V+T+NTL+ GF + NK  +  E+  +M      +  +  T++ ++D L K  +
Sbjct: 463 LSGCARSVITYNTLIDGFCKANKIREAEEIFDEME--VHGVSRNSVTYNTLIDGLCKSRR 520

Query: 561 YHECSAV 567
             + S +
Sbjct: 521 VEDASQL 527


>gi|297843788|ref|XP_002889775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297335617|gb|EFH66034.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 598

 Score =  244 bits (623), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 132/424 (31%), Positives = 224/424 (52%), Gaps = 16/424 (3%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
           P + ++N++     K    +  +S   ++    + PD +T N ++       R LC   +
Sbjct: 170 PDVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTIL-------RSLCDSGK 219

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
           +K+A  +   M+     PDVITY  LI   CR   +  A++L  +M     + G     +
Sbjct: 220 LKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGQAMKLLDEM----RDRGCTP--D 273

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
           + +Y+++++ +CKEG +D+A +   +M   G  P V+    ++   C  G W +   L  
Sbjct: 274 VVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLA 333

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
           +ML  G  P+++TFN++I+ LC+ G +  A  +LE M + G  P+  +YN L+ G+C   
Sbjct: 334 DMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEK 393

Query: 313 RIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYN 372
           ++D A E    M S+GC   +V+YN ++   CK   VE+A+ +  Q+ S G    +ITYN
Sbjct: 394 KMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYN 453

Query: 373 TLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMN 432
           T++ GL +AG+ G A KL DEM+  +++PD  TY+ L+ GL +   V EA+K FH  E  
Sbjct: 454 TVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERM 513

Query: 433 KFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKA 492
                   FN ++ GLCK  + D A +    +  +G  PT  +Y+I+I GL  +G  ++A
Sbjct: 514 GVRPNAVTFNSIMLGLCKTRQTDRAIDFLVYMINRGCKPTETSYTILIEGLAYEGMAKEA 573

Query: 493 NDFL 496
            + L
Sbjct: 574 LELL 577



 Score =  241 bits (615), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 140/500 (28%), Positives = 253/500 (50%), Gaps = 24/500 (4%)

Query: 38  ETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSP---PISSFNLLFGAVAKNRHYDAV 94
           + + N  L +  ++G   L E   F   M +    P   P ++    F  + K R    +
Sbjct: 102 DVESNNHLRQLVRTG--ELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRMGKTRKAAKI 159

Query: 95  ISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVIT 154
           +     L   G +PD +T N++I+       G C    I  A  +   M    V PDV+T
Sbjct: 160 LEV---LEGSGAVPDVITYNVMIS-------GYCKAGEINNALSVLDRM---SVSPDVVT 206

Query: 155 YGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKE 214
           Y T++   C +G L  A+ +  +M+  D         ++ +Y+I+I++ C++  V +A +
Sbjct: 207 YNTILRSLCDSGKLKQAMEVLDRMLQRD------CYPDVITYTILIEATCRDSGVGQAMK 260

Query: 215 LFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLC 274
           L  EM+ RG  P VV    L++G C  G  +E      +M   G +PN++T N+++  +C
Sbjct: 261 LLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMC 320

Query: 275 KGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVV 334
             G+  +A  LL  M+++G +P   T+N L++  C  G +  A +I   M   GC+   +
Sbjct: 321 STGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSL 380

Query: 335 SYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEM 394
           SYN L++G+CK   ++ A+    +++S G    ++TYNT+L+ L + G+   A ++ +++
Sbjct: 381 SYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQL 440

Query: 395 KLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRL 454
                 P L TYN +IDGL K     +A+KL   +     +     ++ L+ GL + G++
Sbjct: 441 SSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKV 500

Query: 455 DNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTL 514
           D A + FH+  + G+ P  VT++ ++ GLC+  + ++A DFL+YM   GC P   ++  L
Sbjct: 501 DEAIKFFHEFERMGVRPNAVTFNSIMLGLCKTRQTDRAIDFLVYMINRGCKPTETSYTIL 560

Query: 515 MHGFLQNNKTSKVVELLHKM 534
           + G        + +ELL+++
Sbjct: 561 IEGLAYEGMAKEALELLNEL 580



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 121/400 (30%), Positives = 211/400 (52%), Gaps = 11/400 (2%)

Query: 164 RTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRG 223
           RTG L    +  + MV   Y   +    +I   + +I   C+ G   KA ++   ++G G
Sbjct: 114 RTGELEEGFKFLENMV---YHGNV---PDIIPCTTLIRGFCRMGKTRKAAKILEVLEGSG 167

Query: 224 INPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEAN 283
             P V+    +I G+C AG   E+N     +  +   P+++T+N ++  LC  GK+ +A 
Sbjct: 168 AVPDVITYNVMISGYCKAG---EINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAM 224

Query: 284 GLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGY 343
            +L+ M+QR   PD  TY  L++  C    +  A ++   M  +GC   VV+YN+L+NG 
Sbjct: 225 EVLDRMLQRDCYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGI 284

Query: 344 CKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDL 403
           CK   ++EA+     + S+G +  VIT+N +L  +   G+   A+KL  +M      P +
Sbjct: 285 CKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSV 344

Query: 404 STYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHK 463
            T+NILI+ LC+   +  A+ +   +  +  +     +N L+ G CK  ++D A E   +
Sbjct: 345 VTFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLER 404

Query: 464 LPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNK 523
           +  +G  P +VTY+ M+  LC+ GK+E A + L  +   GC+P ++T+NT++ G  +  K
Sbjct: 405 MVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGK 464

Query: 524 TSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
           T K ++LL +M    ++L PD  T+S +V  L+++ K  E
Sbjct: 465 TGKAIKLLDEMRA--KDLKPDTITYSSLVGGLSREGKVDE 502



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 110/358 (30%), Positives = 194/358 (54%), Gaps = 5/358 (1%)

Query: 203 LCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPN 262
           L + G +++  +    M   G  P ++ CTTLI GFC  G   +   +   +   G  P+
Sbjct: 112 LVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRMGKTRKAAKILEVLEGSGAVPD 171

Query: 263 LLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFL 322
           ++T+NVMI   CK G+IN A  +L+ M    ++PD  TYN+++   C  G++  A E+  
Sbjct: 172 VITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLD 228

Query: 323 SMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAG 382
            M  + C   V++Y ILI   C+   V +AM L  ++   G    V+TYN L++G+ + G
Sbjct: 229 RMLQRDCYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGICKEG 288

Query: 383 QAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFN 442
           +   A K  ++M     +P++ T+NI++  +C      +A KL   +    F   +  FN
Sbjct: 289 RLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFN 348

Query: 443 CLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKN 502
            LI+ LC+ G L  A ++  K+P+ G  P  ++Y+ ++HG C++ K+++A ++L  M   
Sbjct: 349 ILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSR 408

Query: 503 GCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEK 560
           GC P++VT+NT++    ++ K    VE+L++++   +   P   T++ V+D LAK  K
Sbjct: 409 GCYPDIVTYNTMLTALCKDGKVEDAVEILNQLS--SKGCSPVLITYNTVIDGLAKAGK 464



 Score =  135 bits (340), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 96/344 (27%), Positives = 153/344 (44%), Gaps = 48/344 (13%)

Query: 56  LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNI 115
           + +A      M     +P + ++N+L   + K    D  I F   + S G  P+ +T NI
Sbjct: 255 VGQAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNI 314

Query: 116 LINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLH 175
           ++       R +C   R  +A  L  +M+  G  P V+T+  LIN  CR G L  A+ + 
Sbjct: 315 IL-------RSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDIL 367

Query: 176 KKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLI 235
           +KM     ++G   + N  SY+ ++   CKE  +D+A E    M  RG  P +V   T++
Sbjct: 368 EKMP----KHG--CQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTML 421

Query: 236 HGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLN 295
              C  G  E+   +  ++   G  P L+T+N +ID L K GK  +A  LL+ M  + L 
Sbjct: 422 TALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLK 481

Query: 296 PDRFTYNSLMDGYCLVGRIDTAREIF---------------------------------- 321
           PD  TY+SL+ G    G++D A + F                                  
Sbjct: 482 PDTITYSSLVGGLSREGKVDEAIKFFHEFERMGVRPNAVTFNSIMLGLCKTRQTDRAIDF 541

Query: 322 -LSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGV 364
            + M ++GCK T  SY ILI G       +EA+ L  ++ + G+
Sbjct: 542 LVYMINRGCKPTETSYTILIEGLAYEGMAKEALELLNELCNKGL 585


>gi|15218325|ref|NP_172461.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122215618|sp|Q3EDF8.1|PPR28_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09900
 gi|332190391|gb|AEE28512.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 598

 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 132/424 (31%), Positives = 224/424 (52%), Gaps = 16/424 (3%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
           P + ++N++     K    +  +S   ++    + PD +T N ++       R LC   +
Sbjct: 170 PDVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTIL-------RSLCDSGK 219

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
           +K+A  +   M+     PDVITY  LI   CR   +  A++L  +M     + G     +
Sbjct: 220 LKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEM----RDRGCTP--D 273

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
           + +Y+++++ +CKEG +D+A +   +M   G  P V+    ++   C  G W +   L  
Sbjct: 274 VVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLA 333

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
           +ML  G  P+++TFN++I+ LC+ G +  A  +LE M Q G  P+  +YN L+ G+C   
Sbjct: 334 DMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEK 393

Query: 313 RIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYN 372
           ++D A E    M S+GC   +V+YN ++   CK   VE+A+ +  Q+ S G    +ITYN
Sbjct: 394 KMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYN 453

Query: 373 TLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMN 432
           T++ GL +AG+ G A KL DEM+  +++PD  TY+ L+ GL +   V EA+K FH  E  
Sbjct: 454 TVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERM 513

Query: 433 KFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKA 492
                   FN ++ GLCK+ + D A +    +  +G  P   +Y+I+I GL  +G  ++A
Sbjct: 514 GIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEA 573

Query: 493 NDFL 496
            + L
Sbjct: 574 LELL 577



 Score =  242 bits (618), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 140/500 (28%), Positives = 253/500 (50%), Gaps = 24/500 (4%)

Query: 38  ETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSP---PISSFNLLFGAVAKNRHYDAV 94
           + + N  L +  ++G   L E   F   M +    P   P ++    F  + K R    +
Sbjct: 102 DVESNNHLRQMVRTG--ELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKI 159

Query: 95  ISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVIT 154
           +     L   G +PD +T N++I+       G C    I  A  +   M    V PDV+T
Sbjct: 160 LEI---LEGSGAVPDVITYNVMIS-------GYCKAGEINNALSVLDRM---SVSPDVVT 206

Query: 155 YGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKE 214
           Y T++   C +G L  A+ +  +M+  D         ++ +Y+I+I++ C++  V  A +
Sbjct: 207 YNTILRSLCDSGKLKQAMEVLDRMLQRD------CYPDVITYTILIEATCRDSGVGHAMK 260

Query: 215 LFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLC 274
           L  EM+ RG  P VV    L++G C  G  +E      +M   G +PN++T N+++  +C
Sbjct: 261 LLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMC 320

Query: 275 KGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVV 334
             G+  +A  LL  M+++G +P   T+N L++  C  G +  A +I   M   GC+   +
Sbjct: 321 STGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSL 380

Query: 335 SYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEM 394
           SYN L++G+CK   ++ A+    +++S G    ++TYNT+L+ L + G+   A ++ +++
Sbjct: 381 SYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQL 440

Query: 395 KLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRL 454
                 P L TYN +IDGL K     +A+KL   +     +     ++ L+ GL + G++
Sbjct: 441 SSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKV 500

Query: 455 DNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTL 514
           D A + FH+  + G+ P  VT++ ++ GLC+  + ++A DFL++M   GC PN  ++  L
Sbjct: 501 DEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTIL 560

Query: 515 MHGFLQNNKTSKVVELLHKM 534
           + G        + +ELL+++
Sbjct: 561 IEGLAYEGMAKEALELLNEL 580



 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 121/400 (30%), Positives = 211/400 (52%), Gaps = 11/400 (2%)

Query: 164 RTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRG 223
           RTG L    +  + MV   Y   +    +I   + +I   C+ G   KA ++   ++G G
Sbjct: 114 RTGELEEGFKFLENMV---YHGNV---PDIIPCTTLIRGFCRLGKTRKAAKILEILEGSG 167

Query: 224 INPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEAN 283
             P V+    +I G+C AG   E+N     +  +   P+++T+N ++  LC  GK+ +A 
Sbjct: 168 AVPDVITYNVMISGYCKAG---EINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAM 224

Query: 284 GLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGY 343
            +L+ M+QR   PD  TY  L++  C    +  A ++   M  +GC   VV+YN+L+NG 
Sbjct: 225 EVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGI 284

Query: 344 CKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDL 403
           CK   ++EA+     + S+G +  VIT+N +L  +   G+   A+KL  +M      P +
Sbjct: 285 CKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSV 344

Query: 404 STYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHK 463
            T+NILI+ LC+   +  A+ +   +  +  +     +N L+ G CK  ++D A E   +
Sbjct: 345 VTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLER 404

Query: 464 LPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNK 523
           +  +G  P +VTY+ M+  LC+ GK+E A + L  +   GC+P ++T+NT++ G  +  K
Sbjct: 405 MVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGK 464

Query: 524 TSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
           T K ++LL +M    ++L PD  T+S +V  L+++ K  E
Sbjct: 465 TGKAIKLLDEMRA--KDLKPDTITYSSLVGGLSREGKVDE 502



 Score =  132 bits (332), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 85/322 (26%), Positives = 152/322 (47%), Gaps = 36/322 (11%)

Query: 72  SPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVEN 131
           +P + ++N+L   + K    D  I F   + S G  P+ +T NI++       R +C   
Sbjct: 271 TPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIIL-------RSMCSTG 323

Query: 132 RIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSG---------- 181
           R  +A  L  +M+  G  P V+T+  LIN  CR G L  A+ + +KM             
Sbjct: 324 RWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYN 383

Query: 182 ----------------DYENGLISK---TNIFSYSIIIDSLCKEGLVDKAKELFLEMKGR 222
                           +Y   ++S+    +I +Y+ ++ +LCK+G V+ A E+  ++  +
Sbjct: 384 PLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSK 443

Query: 223 GINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEA 282
           G +P ++   T+I G   AG   +   L  EM     +P+ +T++ ++  L + GK++EA
Sbjct: 444 GCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEA 503

Query: 283 NGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILING 342
                   + G+ P+  T+NS+M G C   + D A +  + M ++GCK    SY ILI G
Sbjct: 504 IKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEG 563

Query: 343 YCKILNVEEAMSLYRQIISNGV 364
                  +EA+ L  ++ + G+
Sbjct: 564 LAYEGMAKEALELLNELCNKGL 585


>gi|414880311|tpg|DAA57442.1| TPA: hypothetical protein ZEAMMB73_673693 [Zea mays]
          Length = 770

 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 154/553 (27%), Positives = 259/553 (46%), Gaps = 56/553 (10%)

Query: 19  VKLSSLFKSPRQIAAVSSPETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSF 78
           V L+ L +S  Q   V+      N  +   C+SG   + EA    G M   +  P I +F
Sbjct: 237 VMLAELERSGIQPTVVT-----YNVLMDALCRSG--RVEEAFQLKGRMVEGRLRPSIVTF 289

Query: 79  NLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATW 138
            +L   +A+ + +  V +  +++   G+ P+ +  N LI          C E    EA  
Sbjct: 290 GILINGLARGQRFGEVDAVLQEMEGFGITPNEVIYNQLIGWH-------CREGHCSEALR 342

Query: 139 LFKNMIAFGVRPDVITYGTLINGFCR---------------------------------- 164
           LF  M++ G++  V+TY  +    C+                                  
Sbjct: 343 LFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEQILDEMLLAGMTVHCSLFNSVVAWHL 402

Query: 165 --TGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGR 222
             TG L V LRL ++MV+         K N    +  I  LCK G  ++A E++  + G+
Sbjct: 403 RGTGRLDVVLRLIREMVA------RFLKPNDAVMTACIQELCKRGKHEEAAEIWFLVLGK 456

Query: 223 GINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEA 282
           G+   +     LIHG C   N +E   +   M+D G   + +T+N+MI   CK  K+ EA
Sbjct: 457 GLGVNIATSNALIHGLCQGNNMKEATKVLKAMVDSGVEFDRITYNIMIQFCCKASKMEEA 516

Query: 283 NGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILING 342
             L + MI+RG  PD FT+N+ +  YC +G+++    +   M S+G K  +V+Y  +I+G
Sbjct: 517 IQLRDDMIKRGFKPDLFTFNTFLRAYCNLGKVEDILHLLDQMKSEGLKPDIVTYGTIIDG 576

Query: 343 YCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPD 402
           YCK  +V +A     ++I NG+R   + YN L+ G  + G    A  + D MK   ++P 
Sbjct: 577 YCKAKDVHKANKYLIELIKNGLRPNAVIYNALIGGYGRNGSISDAIGVLDTMKHNGIQPT 636

Query: 403 LSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFH 462
             TYN L+  +C    V+EA ++F    +   E G+  +  +I G CK G++D A   F 
Sbjct: 637 PITYNSLMYWMCHAGLVEEAKEIFAQCILKNIELGVIGYTIIIQGFCKIGKIDEAVMYFK 696

Query: 463 KLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNN 522
           ++  + + P  +TY+ +++  C+ G  E+A      M  +G  P+ V++NTL+ G  + +
Sbjct: 697 EMHYRDIRPNKMTYTTLMYAYCKCGNKEEAFKLFDEMVSSGIVPDTVSYNTLISGCCEVD 756

Query: 523 KTSKVVELLHKMA 535
              K+VE   +M+
Sbjct: 757 SLDKIVESPAEMS 769



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 139/540 (25%), Positives = 248/540 (45%), Gaps = 53/540 (9%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           C++G   ++ A      +      P + ++N+L  A+ ++   +       ++V   L P
Sbjct: 227 CRAG--EIDAAFVMLAELERSGIQPTVVTYNVLMDALCRSGRVEEAFQLKGRMVEGRLRP 284

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
             +T  ILIN       GL    R  E   + + M  FG+ P+ + Y  LI   CR G+ 
Sbjct: 285 SIVTFGILIN-------GLARGQRFGEVDAVLQEMEGFGITPNEVIYNQLIGWHCREGHC 337

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKE-------------- 214
           S ALRL  +MVS     G+  K  + +Y++I  +LCKEG ++ A++              
Sbjct: 338 SEALRLFDEMVS----KGI--KQTVVTYNLIAKALCKEGEMEHAEQILDEMLLAGMTVHC 391

Query: 215 ----------------------LFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
                                 L  EM  R + P   V T  I   C  G  EE   ++ 
Sbjct: 392 SLFNSVVAWHLRGTGRLDVVLRLIREMVARFLKPNDAVMTACIQELCKRGKHEEAAEIWF 451

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
            +L  G   N+ T N +I  LC+G  + EA  +L+ M+  G+  DR TYN ++   C   
Sbjct: 452 LVLGKGLGVNIATSNALIHGLCQGNNMKEATKVLKAMVDSGVEFDRITYNIMIQFCCKAS 511

Query: 313 RIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYN 372
           +++ A ++   M  +G K  + ++N  +  YC +  VE+ + L  Q+ S G++  ++TY 
Sbjct: 512 KMEEAIQLRDDMIKRGFKPDLFTFNTFLRAYCNLGKVEDILHLLDQMKSEGLKPDIVTYG 571

Query: 373 TLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMN 432
           T++ G  +A     A K   E+    + P+   YN LI G  +N  + +A+ +   ++ N
Sbjct: 572 TIIDGYCKAKDVHKANKYLIELIKNGLRPNAVIYNALIGGYGRNGSISDAIGVLDTMKHN 631

Query: 433 KFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKA 492
             +     +N L+  +C AG ++ A E+F +   K +   V+ Y+I+I G C+ GK+++A
Sbjct: 632 GIQPTPITYNSLMYWMCHAGLVEEAKEIFAQCILKNIELGVIGYTIIIQGFCKIGKIDEA 691

Query: 493 NDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVV 552
             +   M      PN +T+ TLM+ + +     +  +L  +M      +VPD  +++ ++
Sbjct: 692 VMYFKEMHYRDIRPNKMTYTTLMYAYCKCGNKEEAFKLFDEMV--SSGIVPDTVSYNTLI 749



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 139/518 (26%), Positives = 241/518 (46%), Gaps = 20/518 (3%)

Query: 24  LFKSPRQIAAVSSPE---TQLNEFLHENCKSGII--NLNEARYFFGYMTHMQPSPPISSF 78
           LF +P  +AA +  +   T   + L   C +     +L+ A   F  ++    SP I + 
Sbjct: 124 LFFNPLSVAAAAIADSDCTATADLLVRACLNSPAPGSLSCAADAFLELSTRGASPSIKTC 183

Query: 79  NLLFGAVAKNRHYDAVISFYRKLVSI-GLLPDFLTLNILINCFGNKERGLCVENRIKEAT 137
           N+L  A+      D     + ++     + PD  T  ++I       + LC    I  A 
Sbjct: 184 NILVEALGCGGQLDLARKVFGEMRDGNAVAPDVYTYTVMI-------KALCRAGEIDAAF 236

Query: 138 WLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYS 197
            +   +   G++P V+TY  L++  CR+G +  A +L  +MV G        + +I ++ 
Sbjct: 237 VMLAELERSGIQPTVVTYNVLMDALCRSGRVEEAFQLKGRMVEGRL------RPSIVTFG 290

Query: 198 IIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDL 257
           I+I+ L +     +   +  EM+G GI P  V+   LI   C  G+  E   LF EM+  
Sbjct: 291 ILINGLARGQRFGEVDAVLQEMEGFGITPNEVIYNQLIGWHCREGHCSEALRLFDEMVSK 350

Query: 258 GPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCL-VGRIDT 316
           G +  ++T+N++   LCK G++  A  +L+ M+  G+      +NS++  +    GR+D 
Sbjct: 351 GIKQTVVTYNLIAKALCKEGEMEHAEQILDEMLLAGMTVHCSLFNSVVAWHLRGTGRLDV 410

Query: 317 AREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLS 376
              +   M ++  K         I   CK    EEA  ++  ++  G+   + T N L+ 
Sbjct: 411 VLRLIREMVARFLKPNDAVMTACIQELCKRGKHEEAAEIWFLVLGKGLGVNIATSNALIH 470

Query: 377 GLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEF 436
           GL Q      A K+   M    VE D  TYNI+I   CK + ++EA++L   +    F+ 
Sbjct: 471 GLCQGNNMKEATKVLKAMVDSGVEFDRITYNIMIQFCCKASKMEEAIQLRDDMIKRGFKP 530

Query: 437 GIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFL 496
            +  FN  +   C  G++++   L  ++  +GL P +VTY  +I G C+   + KAN +L
Sbjct: 531 DLFTFNTFLRAYCNLGKVEDILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDVHKANKYL 590

Query: 497 LYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKM 534
           + + KNG  PN V +N L+ G+ +N   S  + +L  M
Sbjct: 591 IELIKNGLRPNAVIYNALIGGYGRNGSISDAIGVLDTM 628



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 115/425 (27%), Positives = 204/425 (48%), Gaps = 8/425 (1%)

Query: 140 FKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSII 199
           F  +   G  P + T   L+      G L +A     + V G+  +G     ++++Y+++
Sbjct: 168 FLELSTRGASPSIKTCNILVEALGCGGQLDLA-----RKVFGEMRDGNAVAPDVYTYTVM 222

Query: 200 IDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGP 259
           I +LC+ G +D A  +  E++  GI P VV    L+   C +G  EE   L   M++   
Sbjct: 223 IKALCRAGEIDAAFVMLAELERSGIQPTVVTYNVLMDALCRSGRVEEAFQLKGRMVEGRL 282

Query: 260 RPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTARE 319
           RP+++TF ++I+ L +G +  E + +L+ M   G+ P+   YN L+  +C  G    A  
Sbjct: 283 RPSIVTFGILINGLARGQRFGEVDAVLQEMEGFGITPNEVIYNQLIGWHCREGHCSEALR 342

Query: 320 IFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSG-L 378
           +F  M SKG K TVV+YN++    CK   +E A  +  +++  G+      +N++++  L
Sbjct: 343 LFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEQILDEMLLAGMTVHCSLFNSVVAWHL 402

Query: 379 FQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGI 438
              G+     +L  EM    ++P+ +     I  LCK    +EA +++ ++        I
Sbjct: 403 RGTGRLDVVLRLIREMVARFLKPNDAVMTACIQELCKRGKHEEAAEIWFLVLGKGLGVNI 462

Query: 439 EIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLY 498
              N LI GLC+   +  A ++   +   G+    +TY+IMI   C+  K+E+A      
Sbjct: 463 ATSNALIHGLCQGNNMKEATKVLKAMVDSGVEFDRITYNIMIQFCCKASKMEEAIQLRDD 522

Query: 499 MEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKD 558
           M K G  P++ TFNT +  +    K   ++ LL +M      L PD  T+  ++D   K 
Sbjct: 523 MIKRGFKPDLFTFNTFLRAYCNLGKVEDILHLLDQM--KSEGLKPDIVTYGTIIDGYCKA 580

Query: 559 EKYHE 563
           +  H+
Sbjct: 581 KDVHK 585



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 82/314 (26%), Positives = 137/314 (43%), Gaps = 38/314 (12%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
           N  +H  C+    N+ EA      M          ++N++     K    +  I     +
Sbjct: 466 NALIHGLCQGN--NMKEATKVLKAMVDSGVEFDRITYNIMIQFCCKASKMEEAIQLRDDM 523

Query: 102 VSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLING 161
           +  G  PD  T N  +       R  C   ++++   L   M + G++PD++TYGT+I+G
Sbjct: 524 IKRGFKPDLFTFNTFL-------RAYCNLGKVEDILHLLDQMKSEGLKPDIVTYGTIIDG 576

Query: 162 FCRTGNLSVA-----------LR----LHKKMVSGDYENGLIS--------------KTN 192
           +C+  ++  A           LR    ++  ++ G   NG IS              +  
Sbjct: 577 YCKAKDVHKANKYLIELIKNGLRPNAVIYNALIGGYGRNGSISDAIGVLDTMKHNGIQPT 636

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
             +Y+ ++  +C  GLV++AKE+F +   + I   V+  T +I GFC  G  +E    F 
Sbjct: 637 PITYNSLMYWMCHAGLVEEAKEIFAQCILKNIELGVIGYTIIIQGFCKIGKIDEAVMYFK 696

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
           EM     RPN +T+  ++   CK G   EA  L + M+  G+ PD  +YN+L+ G C V 
Sbjct: 697 EMHYRDIRPNKMTYTTLMYAYCKCGNKEEAFKLFDEMVSSGIVPDTVSYNTLISGCCEVD 756

Query: 313 RIDTAREIFLSMHS 326
            +D   E    M S
Sbjct: 757 SLDKIVESPAEMSS 770


>gi|413916119|gb|AFW56051.1| hypothetical protein ZEAMMB73_517553 [Zea mays]
          Length = 663

 Score =  243 bits (620), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 149/493 (30%), Positives = 243/493 (49%), Gaps = 18/493 (3%)

Query: 63  FGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGN 122
           F  M     +P +   N +   +     +D + + + +++ +G+ P  +T N L++ F  
Sbjct: 184 FREMASHGVAPDVKDCNKVLRVLRDAARWDDMSAVHAEMLQLGIEPSIVTYNTLLDSFSK 243

Query: 123 KERGLCVENRIKEATWLFKNMIAFGVR--PDVITYGTLINGFCRTGNLSVALRLHKKMVS 180
                  E R  +   L K M A G    P+ +TY  +I G  R G L  A  L ++M  
Sbjct: 244 -------EGRKDKIDMLLKEMEARGSSCLPNDVTYNVVIAGLARKGYLEEAAELVEEM-- 294

Query: 181 GDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCC 240
                 L  K + F+Y+ +I  L   G V K  +L LEM+  GI P VV    +IHG   
Sbjct: 295 -----RLSKKASSFTYNPLITGLLARGFVKKVDDLQLEMENEGIMPTVVTYNAMIHGLLQ 349

Query: 241 AGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFT 300
           +G  E     F+EM  +G  P+++T+N +++  CK G   EA  L   + + GL P   T
Sbjct: 350 SGQIEAAQAKFVEMRAMGLLPDVITYNSLLNGYCKAGNQKEALLLFGDLRRAGLAPTVLT 409

Query: 301 YNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQII 360
           YN L+DGYC +G ++ AR +   M  +GC   V +Y IL+ G   + ++      + +++
Sbjct: 410 YNILIDGYCRLGDLEEARRLKEEMVEQGCLPDVYTYTILMKGSHNVCSLAMTREFFDEML 469

Query: 361 SNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQ 420
           S G+R     YNT +      G    + +L + + L  +  D  TYNILIDGLCK   ++
Sbjct: 470 SKGLRPDCFAYNTRICAEITLGDISKSFQLREVIMLEGISSDTVTYNILIDGLCKTGNLK 529

Query: 421 EAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMI 480
           +A +L   +  N  +     + CLI   C+ G L  A + F+ +   GL P+ VTY+++I
Sbjct: 530 DAEELMMQMISNGLQPDCITYTCLIHAHCERGFLREARKFFNDMISDGLPPSAVTYTVII 589

Query: 481 HGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERN 540
           H  CR+G L  A  +   M + G  PN +T+N L+H   +  +T       ++M   ER 
Sbjct: 590 HAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLAYRHFYEML--ERG 647

Query: 541 LVPDDTTFSIVVD 553
           LVP+  T+++++D
Sbjct: 648 LVPNKYTYTLLID 660



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 107/345 (31%), Positives = 176/345 (51%), Gaps = 7/345 (2%)

Query: 216 FLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCK 275
           F EM   G+ P V  C  ++     A  W++++ +  EML LG  P+++T+N ++D   K
Sbjct: 184 FREMASHGVAPDVKDCNKVLRVLRDAARWDDMSAVHAEMLQLGIEPSIVTYNTLLDSFSK 243

Query: 276 GGKINEANGLLELMIQRGLN--PDRFTYNSLMDGYCLVGRIDTAREIFLSMH-SKGCKHT 332
            G+ ++ + LL+ M  RG +  P+  TYN ++ G    G ++ A E+   M  SK  K +
Sbjct: 244 EGRKDKIDMLLKEMEARGSSCLPNDVTYNVVIAGLARKGYLEEAAELVEEMRLSK--KAS 301

Query: 333 VVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFD 392
             +YN LI G      V++   L  ++ + G+  TV+TYN ++ GL Q+GQ   AQ  F 
Sbjct: 302 SFTYNPLITGLLARGFVKKVDDLQLEMENEGIMPTVVTYNAMIHGLLQSGQIEAAQAKFV 361

Query: 393 EMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAG 452
           EM+   + PD+ TYN L++G CK    +EA+ LF  L        +  +N LIDG C+ G
Sbjct: 362 EMRAMGLLPDVITYNSLLNGYCKAGNQKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLG 421

Query: 453 RLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFN 512
            L+ A  L  ++ ++G +P V TY+I++ G      L    +F   M   G  P+   +N
Sbjct: 422 DLEEARRLKEEMVEQGCLPDVYTYTILMKGSHNVCSLAMTREFFDEMLSKGLRPDCFAYN 481

Query: 513 TLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAK 557
           T +   +     SK  +L   +      +  D  T++I++D L K
Sbjct: 482 TRICAEITLGDISKSFQLREVIM--LEGISSDTVTYNILIDGLCK 524



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 89/301 (29%), Positives = 142/301 (47%), Gaps = 15/301 (4%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
           N  L+  CK+G  N  EA   FG +     +P + ++N+L     +    +       ++
Sbjct: 376 NSLLNGYCKAG--NQKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGDLEEARRLKEEM 433

Query: 102 VSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLING 161
           V  G LPD  T  IL+    N    +C     +E    F  M++ G+RPD   Y T I  
Sbjct: 434 VEQGCLPDVYTYTILMKGSHN----VCSLAMTRE---FFDEMLSKGLRPDCFAYNTRICA 486

Query: 162 FCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKG 221
               G++S + +L + ++      G+ S T   +Y+I+ID LCK G +  A+EL ++M  
Sbjct: 487 EITLGDISKSFQLREVIML----EGISSDT--VTYNILIDGLCKTGNLKDAEELMMQMIS 540

Query: 222 RGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINE 281
            G+ P  +  T LIH  C  G   E    F +M+  G  P+ +T+ V+I   C+ G +  
Sbjct: 541 NGLQPDCITYTCLIHAHCERGFLREARKFFNDMISDGLPPSAVTYTVIIHAYCRRGNLYS 600

Query: 282 ANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILIN 341
           A G    M++ G+ P+  TYN L+   C +GR   A   F  M  +G      +Y +LI+
Sbjct: 601 AYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLAYRHFYEMLERGLVPNKYTYTLLID 660

Query: 342 G 342
           G
Sbjct: 661 G 661


>gi|119638441|gb|ABL85032.1| auxin efflux carrier [Brachypodium sylvaticum]
          Length = 895

 Score =  243 bits (620), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 177/628 (28%), Positives = 271/628 (43%), Gaps = 121/628 (19%)

Query: 44  FLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVS 103
           F+  +CK+   + + A+  F  M     +    ++N++   + ++   +    F  ++V 
Sbjct: 249 FIEAHCKAR--DFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAFGFKEEMVD 306

Query: 104 IGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFC 163
            GL PD  T   L+N       GLC  +R+KEA  L   M   G++P+++ YGTL++GF 
Sbjct: 307 YGLSPDAFTYGALMN-------GLCKGSRLKEAKALLDEMSCSGLKPNIVVYGTLVDGFM 359

Query: 164 RTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRG 223
           + G  + A  + K+M+S   +       N   Y  +I  LCK G + +A +L  EM   G
Sbjct: 360 KEGKTAEAFDILKEMISAGVQ------PNKIMYDNLIRGLCKIGQLGRASKLLKEMIKVG 413

Query: 224 INPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEAN 283
           + P       L+ G     + +    L  EM + G  PN+ ++ +MI+ LC+ G+  EA 
Sbjct: 414 LRPDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYGIMINGLCQNGESKEAG 473

Query: 284 GLLELMIQRGL-----------------------------------NPDRFTYNSLMDGY 308
            LLE MI  GL                                   +PD F YNSL+ G 
Sbjct: 474 NLLEEMISEGLKPNAFMYAPLIIGHSKEGNISLACEALEKMTKANVHPDLFCYNSLIKGL 533

Query: 309 CLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTV 368
             VGR++ A E +  +  +G      +Y+ LI+GYCK  N+E+A  L RQ++++G++   
Sbjct: 534 STVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQMLNSGLKPNA 593

Query: 369 ITYNTLLSGLFQAGQAGYAQKLFDEM--------------------KLYNVE-------- 400
            TY  LL G F++        +   M                    +  N+E        
Sbjct: 594 DTYTDLLEGYFKSNDYEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTE 653

Query: 401 -------PDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGR 453
                  PDL  Y+ LI GLCK   +++AV L   +     E GI  +N LIDG C++G 
Sbjct: 654 VEKNGLVPDLHIYSSLISGLCKIADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGD 713

Query: 454 LDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAP------- 506
           +  A  +F  +  KGLVP  VTY+ +I G C+ G +  A D    M   G AP       
Sbjct: 714 ISRARNVFDSILAKGLVPNCVTYTALIDGNCKNGDITDAFDLYKEMLDRGIAPDAFVYNV 773

Query: 507 ---------------------------NVVTFNTLMHGFLQNNKTSKVVELLHKMAEPER 539
                                      NV  FNTL+HGF +  K  +  +LLH M   +R
Sbjct: 774 LATGCSDAADLEQALFLTEEMFNRGYANVSLFNTLVHGFCKRGKLQETEKLLHVMM--DR 831

Query: 540 NLVPDDTTFSIVVDLLAKDEKYHECSAV 567
            +VP+  T   VV    K  K  E   V
Sbjct: 832 EIVPNAQTVEKVVSEFGKAGKLGEAHRV 859



 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 144/487 (29%), Positives = 231/487 (47%), Gaps = 50/487 (10%)

Query: 108 PDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGN 167
           P    L++L++ +  K+ G      ++ A  +   M   G+ P       L+    R   
Sbjct: 171 PSTAVLDVLVDTY--KKTG-----SVRNAAQVVLMMADLGLAPTRRCCNGLLKDLLRADA 223

Query: 168 LSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPA 227
           + +  +L   M       G++   ++++YS  I++ CK    D AK++F EM+ R     
Sbjct: 224 MELLWKLKGFMEGA----GILP--DVYTYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMN 277

Query: 228 VVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLE 287
            V    +I G C +G  EE  G   EM+D G  P+  T+  +++ LCKG ++ EA  LL+
Sbjct: 278 EVTYNVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLD 337

Query: 288 LMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKIL 347
            M   GL P+   Y +L+DG+   G+   A +I   M S G +   + Y+ LI G CKI 
Sbjct: 338 EMSCSGLKPNIVVYGTLVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIG 397

Query: 348 NVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYN 407
            +  A  L +++I  G+R    TYN L+ G FQ      A +L +EM+   + P++ +Y 
Sbjct: 398 QLGRASKLLKEMIKVGLRPDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYG 457

Query: 408 ILIDGLCKNNCVQEAVKLFHM-----LEMNKFEFGIEI---------------------- 440
           I+I+GLC+N   +EA  L        L+ N F +   I                      
Sbjct: 458 IMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGNISLACEALEKMTKA 517

Query: 441 --------FNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKA 492
                   +N LI GL   GR++ A E + ++ ++GLVP   TYS +IHG C+ G LEKA
Sbjct: 518 NVHPDLFCYNSLIKGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKA 577

Query: 493 NDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVV 552
           +  L  M  +G  PN  T+  L+ G+ ++N   KV  +L  M        PD+  + IV+
Sbjct: 578 DQLLRQMLNSGLKPNADTYTDLLEGYFKSNDYEKVSSILQSMLGSGDK--PDNHIYGIVI 635

Query: 553 DLLAKDE 559
             L++ E
Sbjct: 636 RNLSRSE 642



 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 132/534 (24%), Positives = 244/534 (45%), Gaps = 17/534 (3%)

Query: 36  SPETQLNEFLHENCKSG---IINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYD 92
           S   Q N+ +++N   G   I  L  A      M  +   P   ++N L     +    D
Sbjct: 376 SAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEMIKVGLRPDTFTYNPLMQGHFQQHDKD 435

Query: 93  AVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDV 152
                  ++ + G+LP+  +  I+IN       GLC     KEA  L + MI+ G++P+ 
Sbjct: 436 GAFELLNEMRNSGILPNVYSYGIMIN-------GLCQNGESKEAGNLLEEMISEGLKPNA 488

Query: 153 ITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKA 212
             Y  LI G  + GN+S+A    +KM   +         ++F Y+ +I  L   G +++A
Sbjct: 489 FMYAPLIIGHSKEGNISLACEALEKMTKANVH------PDLFCYNSLIKGLSTVGRMEEA 542

Query: 213 KELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDC 272
           +E + +++ RG+ P     + LIHG+C  GN E+ + L  +ML+ G +PN  T+  +++ 
Sbjct: 543 EEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQMLNSGLKPNADTYTDLLEG 602

Query: 273 LCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHT 332
             K     + + +L+ M+  G  PD   Y  ++        ++ A  +   +   G    
Sbjct: 603 YFKSNDYEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPD 662

Query: 333 VVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFD 392
           +  Y+ LI+G CKI ++E+A+ L  ++   G+   ++ YN L+ G  ++G    A+ +FD
Sbjct: 663 LHIYSSLISGLCKIADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFD 722

Query: 393 EMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAG 452
            +    + P+  TY  LIDG CKN  + +A  L+  +          ++N L  G   A 
Sbjct: 723 SILAKGLVPNCVTYTALIDGNCKNGDITDAFDLYKEMLDRGIAPDAFVYNVLATGCSDAA 782

Query: 453 RLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFN 512
            L+ A  L  ++  +G    V  ++ ++HG C++GKL++    L  M      PN  T  
Sbjct: 783 DLEQALFLTEEMFNRGYA-NVSLFNTLVHGFCKRGKLQETEKLLHVMMDREIVPNAQTVE 841

Query: 513 TLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSA 566
            ++  F +  K  +   +  ++ + + +    D    +  D++ K     +C A
Sbjct: 842 KVVSEFGKAGKLGEAHRVFAELQQKKASQSATDRFSLLFTDMINKGLIPPKCDA 895



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 83/317 (26%), Positives = 154/317 (48%)

Query: 218 EMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGG 277
           + + R  +P+  V   L+  +   G+      + + M DLG  P     N ++  L +  
Sbjct: 163 DHRSRSPSPSTAVLDVLVDTYKKTGSVRNAAQVVLMMADLGLAPTRRCCNGLLKDLLRAD 222

Query: 278 KINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYN 337
            +     L   M   G+ PD +TY++ ++ +C     D A+++F  M  + C    V+YN
Sbjct: 223 AMELLWKLKGFMEGAGILPDVYTYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYN 282

Query: 338 ILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLY 397
           ++I+G C+   VEEA     +++  G+     TY  L++GL +  +   A+ L DEM   
Sbjct: 283 VMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMSCS 342

Query: 398 NVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNA 457
            ++P++  Y  L+DG  K     EA  +   +     +    +++ LI GLCK G+L  A
Sbjct: 343 GLKPNIVVYGTLVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRA 402

Query: 458 WELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHG 517
            +L  ++ + GL P   TY+ ++ G  ++   + A + L  M  +G  PNV ++  +++G
Sbjct: 403 SKLLKEMIKVGLRPDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYGIMING 462

Query: 518 FLQNNKTSKVVELLHKM 534
             QN ++ +   LL +M
Sbjct: 463 LCQNGESKEAGNLLEEM 479



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 94/376 (25%), Positives = 170/376 (45%), Gaps = 29/376 (7%)

Query: 214 ELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLL--------- 264
           + F   + R   P+      L    C A  + + NGL  +M+   P P L+         
Sbjct: 101 DFFYWSRPRIAPPSADAFARLAASLCAASLFPQANGLLHQMILAHPHPPLVLASIQRAIQ 160

Query: 265 --------------TFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCL 310
                           +V++D   K G +  A  ++ +M   GL P R   N L+     
Sbjct: 161 DTDHRSRSPSPSTAVLDVLVDTYKKTGSVRNAAQVVLMMADLGLAPTRRCCNGLLKDLLR 220

Query: 311 VGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVIT 370
              ++   ++   M   G    V +Y+  I  +CK  + + A  ++ ++         +T
Sbjct: 221 ADAMELLWKLKGFMEGAGILPDVYTYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEVT 280

Query: 371 YNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLE 430
           YN ++SGL ++G    A    +EM  Y + PD  TY  L++GLCK + ++EA  L   + 
Sbjct: 281 YNVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMS 340

Query: 431 MNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLE 490
            +  +  I ++  L+DG  K G+   A+++  ++   G+ P  + Y  +I GLC+ G+L 
Sbjct: 341 CSGLKPNIVVYGTLVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLG 400

Query: 491 KANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERN--LVPDDTTF 548
           +A+  L  M K G  P+  T+N LM G  Q +      ELL++M    RN  ++P+  ++
Sbjct: 401 RASKLLKEMIKVGLRPDTFTYNPLMQGHFQQHDKDGAFELLNEM----RNSGILPNVYSY 456

Query: 549 SIVVDLLAKDEKYHEC 564
            I+++ L ++ +  E 
Sbjct: 457 GIMINGLCQNGESKEA 472


>gi|15234349|ref|NP_194530.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75208278|sp|Q9SUD8.1|PP340_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g28010
 gi|4455360|emb|CAB36770.1| putative protein [Arabidopsis thaliana]
 gi|7269655|emb|CAB79603.1| putative protein [Arabidopsis thaliana]
 gi|332660020|gb|AEE85420.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 704

 Score =  243 bits (620), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 179/589 (30%), Positives = 274/589 (46%), Gaps = 49/589 (8%)

Query: 31  IAAVSSPETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRH 90
           + A S  ET+L       C+     L  A   F        S   +  NL+   + ++R+
Sbjct: 33  VNAFSETETKLRSL----CEDSNPQLKNAVSVFQQAVDSGSSLAFAGNNLM-AKLVRSRN 87

Query: 91  YDAVISFYRKLVSIGLLPDFLTLNILINCFGNKER------------------------- 125
           ++   SFYRK++      +F++L+ L+ C+    +                         
Sbjct: 88  HELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNI 147

Query: 126 ---GLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGD 182
              GLC      +A  L + M    + PDV +Y T+I GFC    L  AL L  +M    
Sbjct: 148 LLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEM---- 203

Query: 183 YENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAG 242
              G     ++ ++ I+ID+ CK G +D+A     EMK  G+   +VV T+LI GFC  G
Sbjct: 204 --KGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCG 261

Query: 243 NWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYN 302
             +    LF E+L+ G  P  +T+N +I   CK G++ EA+ + E MI+RG+ P+ +TY 
Sbjct: 262 ELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYT 321

Query: 303 SLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISN 362
            L+DG C VG+   A ++   M  K  +   V+YNI+IN  CK   V +A+ +   +   
Sbjct: 322 GLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKR 381

Query: 363 GVRQTVITYNTLLSGLFQAGQAGYAQKLFDEM--KLYNVEPDLSTYNILIDGLCKNNCVQ 420
             R   ITYN LL GL   G    A KL   M       +PD+ +YN LI GLCK N + 
Sbjct: 382 RTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLH 441

Query: 421 EAVKLFHMLEMNKFEFGIEI-FNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIM 479
           +A+ ++ +L + K   G  +  N L++   KAG ++ A EL+ ++    +V    TY+ M
Sbjct: 442 QALDIYDLL-VEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAM 500

Query: 480 IHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPER 539
           I G C+ G L  A   L  M  +   P+V  +N L+    +     +   L  +M     
Sbjct: 501 IDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRD-- 558

Query: 540 NLVPDDTTFSIVVD--LLAKDEKYHECSAVSKSSYRACLYVTIFQPSSL 586
           N  PD  +F+I++D  L A D K  E   V  S  RA L   +F  S L
Sbjct: 559 NNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMS--RAGLSPDLFTYSKL 605



 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 142/518 (27%), Positives = 246/518 (47%), Gaps = 41/518 (7%)

Query: 54  INLNEARYFFGYMTHMQP---SPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDF 110
           + + +  + FG +  M     +  + + N+L   + +N      +S  R++    L+PD 
Sbjct: 118 VQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDV 177

Query: 111 LTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSV 170
            + N +I       RG C    +++A  L   M   G    ++T+G LI+ FC+ G +  
Sbjct: 178 FSYNTVI-------RGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDE 230

Query: 171 ALRLHKKMVSGDYENGLISKTNIF-----------------------------SYSIIID 201
           A+   K+M     E  L+  T++                              +Y+ +I 
Sbjct: 231 AMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIR 290

Query: 202 SLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRP 261
             CK G + +A E+F  M  RG+ P V   T LI G C  G  +E   L   M++    P
Sbjct: 291 GFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEP 350

Query: 262 NLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIF 321
           N +T+N++I+ LCK G + +A  ++ELM +R   PD  TYN L+ G C  G +D A ++ 
Sbjct: 351 NAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLL 410

Query: 322 LSM--HSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLF 379
             M   S      V+SYN LI+G CK   + +A+ +Y  ++        +T N LL+   
Sbjct: 411 YLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTL 470

Query: 380 QAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIE 439
           +AG    A +L+ ++    +  +  TY  +IDG CK   +  A  L   + +++ +  + 
Sbjct: 471 KAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVF 530

Query: 440 IFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYM 499
            +NCL+  LCK G LD AW LF ++ +    P VV+++IMI G  + G ++ A   L+ M
Sbjct: 531 DYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGM 590

Query: 500 EKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEP 537
            + G +P++ T++ L++ FL+     + +    KM + 
Sbjct: 591 SRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDS 628



 Score =  119 bits (297), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 88/375 (23%), Positives = 167/375 (44%), Gaps = 15/375 (4%)

Query: 52  GIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFL 111
           G+    EA      M      P   ++N++   + K+      +     +      PD +
Sbjct: 329 GVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNI 388

Query: 112 TLNILINCFGNKERGLCVENRIKEATWLFKNMIAFG--VRPDVITYGTLINGFCRTGNLS 169
           T NIL+        GLC +  + EA+ L   M+       PDVI+Y  LI+G C+   L 
Sbjct: 389 TYNILLG-------GLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLH 441

Query: 170 VALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVV 229
            AL ++  +V        +   +  + +I+++S  K G V+KA EL+ ++    I     
Sbjct: 442 QALDIYDLLVEK------LGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSD 495

Query: 230 VCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELM 289
             T +I GFC  G      GL  +M     +P++  +N ++  LCK G +++A  L E M
Sbjct: 496 TYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEM 555

Query: 290 IQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNV 349
            +    PD  ++N ++DG    G I +A  + + M   G    + +Y+ LIN + K+  +
Sbjct: 556 QRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYL 615

Query: 350 EEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNIL 409
           +EA+S + +++ +G        +++L      G+     +L  ++   ++  D      +
Sbjct: 616 DEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVDKDIVLDKELTCTV 675

Query: 410 IDGLCKNNCVQEAVK 424
           +D +C ++   +  K
Sbjct: 676 MDYMCNSSANMDLAK 690


>gi|302780004|ref|XP_002971777.1| hypothetical protein SELMODRAFT_96029 [Selaginella moellendorffii]
 gi|300160909|gb|EFJ27526.1| hypothetical protein SELMODRAFT_96029 [Selaginella moellendorffii]
          Length = 556

 Score =  243 bits (619), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 155/474 (32%), Positives = 242/474 (51%), Gaps = 32/474 (6%)

Query: 75  ISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIK 134
           + S+N L   + K+ H       Y+ L+  G  P+ +T  ILI       RG C   +  
Sbjct: 27  VHSYNHLLDILVKSGHQFRTGKVYKDLLHSGCSPNLVTFKILI-------RGNCKAGQAT 79

Query: 135 EATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN-- 192
            A    + +  F V PDV  +  LI+G  + GN   A++L + M S        S+ N  
Sbjct: 80  RALEFLRALDEFSVAPDVYIFNFLIHGLFKDGNPDQAVKLFENMES--------SRVNPD 131

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRG--INPAVVVCTTLIH-GFCCAGNWEEVNG 249
           IF+Y+ +I  LCK G ++KA+EL  EM  RG    P +V   TLI+ G C  G+ EE   
Sbjct: 132 IFTYNTVISGLCKSGNLEKARELLEEMIRRGGKSAPDIVTYNTLINAGICKDGDVEEALE 191

Query: 250 LFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYC 309
           +   M   GP P+++T+N +I  LC  G++ EA  +L+ M     +PD  T+N+L+DG+C
Sbjct: 192 ILDGMKLAGPAPDVITYNSIIHALCVAGRVVEAAEILKTM---SCSPDLVTFNTLLDGFC 248

Query: 310 LVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVI 369
             G +  A E+   M  +     V++Y IL+NG C++  V+ A  L  +I+  G    VI
Sbjct: 249 KAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVI 308

Query: 370 TYNTLLSGLFQAGQAGYAQKLFDEMKL---------YNVEPDLSTYNILIDGLCKNNCVQ 420
            Y +L+ GL ++G+   A KL  EM            N+ P L TYNI++ GL K+  + 
Sbjct: 309 AYTSLVDGLCKSGEIEEAHKLVKEMSAREILAEMVSINMVPPLFTYNIVLGGLIKDGSIS 368

Query: 421 EAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMI 480
           +AV L   L    +   +  +N LIDGLCKA R+  A +L  ++   G  P  VT   ++
Sbjct: 369 KAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASLGCFPNDVTLGSVV 428

Query: 481 HGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKM 534
            GLCR G+++ A   ++ M +   APNVV + +L+ G  ++++      +L  M
Sbjct: 429 FGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACVVLDAM 482



 Score =  235 bits (599), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 150/493 (30%), Positives = 246/493 (49%), Gaps = 28/493 (5%)

Query: 66  MTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKER 125
           + H   SP + +F +L     K       + F R L    + PD    N LI+       
Sbjct: 53  LLHSGCSPNLVTFKILIRGNCKAGQATRALEFLRALDEFSVAPDVYIFNFLIH------- 105

Query: 126 GLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYEN 185
           GL  +    +A  LF+NM +  V PD+ TY T+I+G C++GNL  A  L ++M+      
Sbjct: 106 GLFKDGNPDQAVKLFENMESSRVNPDIFTYNTVISGLCKSGNLEKARELLEEMI----RR 161

Query: 186 GLISKTNIFSYSIIIDS-LCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNW 244
           G  S  +I +Y+ +I++ +CK+G V++A E+   MK  G  P V+   ++IH  C AG  
Sbjct: 162 GGKSAPDIVTYNTLINAGICKDGDVEEALEILDGMKLAGPAPDVITYNSIIHALCVAGRV 221

Query: 245 EEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSL 304
            E   +   M      P+L+TFN ++D  CK G +  A  +LE M +  + PD  TY  L
Sbjct: 222 VEAAEILKTM---SCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTIL 278

Query: 305 MDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGV 364
           ++G C VG++  A  +   +  +G    V++Y  L++G CK   +EEA  L +++ +  +
Sbjct: 279 VNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSAREI 338

Query: 365 RQTVI---------TYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCK 415
              ++         TYN +L GL + G    A  L  ++      PD+ TYN LIDGLCK
Sbjct: 339 LAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCK 398

Query: 416 NNCVQEAVKLF-HMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVV 474
            N V+EA  L   M  +  F   + +   ++ GLC+ GR+D+AW L  ++ +K   P VV
Sbjct: 399 ANRVREACDLADEMASLGCFPNDVTL-GSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVV 457

Query: 475 TYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKM 534
            Y+ +I GLC+  +++ A   L  M   G A +   +  L+   +   + ++ + +  +M
Sbjct: 458 VYTSLIDGLCKSDRMDDACVVLDAMRGQGVALDDFAYRKLIVSMIHGGRVAEAMAMYDEM 517

Query: 535 AEPERNLVPDDTT 547
               R  +PD +T
Sbjct: 518 V--ARGFLPDGST 528



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 131/443 (29%), Positives = 229/443 (51%), Gaps = 27/443 (6%)

Query: 139 LFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSI 198
           ++K+++  G  P+++T+  LI G C+ G  + AL   + +      +      +++ ++ 
Sbjct: 49  VYKDLLHSGCSPNLVTFKILIRGNCKAGQATRALEFLRAL------DEFSVAPDVYIFNF 102

Query: 199 IIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLG 258
           +I  L K+G  D+A +LF  M+   +NP +    T+I G C +GN E+   L  EM+  G
Sbjct: 103 LIHGLFKDGNPDQAVKLFENMESSRVNPDIFTYNTVISGLCKSGNLEKARELLEEMIRRG 162

Query: 259 PR--PNLLTFNVMIDC-LCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRID 315
            +  P+++T+N +I+  +CK G + EA  +L+ M   G  PD  TYNS++   C+ GR+ 
Sbjct: 163 GKSAPDIVTYNTLINAGICKDGDVEEALEILDGMKLAGPAPDVITYNSIIHALCVAGRVV 222

Query: 316 TAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLL 375
            A EI  +M    C   +V++N L++G+CK   +  A+ +  ++    +   VITY  L+
Sbjct: 223 EAAEILKTM---SCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILV 279

Query: 376 SGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFE 435
           +GL + GQ   A  L +E+      PD+  Y  L+DGLCK+  ++EA KL    EM+  E
Sbjct: 280 NGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVK--EMSARE 337

Query: 436 FGIEI-----------FNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLC 484
              E+           +N ++ GL K G +  A  L   L  +G VP VVTY+ +I GLC
Sbjct: 338 ILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLC 397

Query: 485 RKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPD 544
           +  ++ +A D    M   GC PN VT  +++ G  +  +      L+ +M+   +   P+
Sbjct: 398 KANRVREACDLADEMASLGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMS--RKRHAPN 455

Query: 545 DTTFSIVVDLLAKDEKYHECSAV 567
              ++ ++D L K ++  +   V
Sbjct: 456 VVVYTSLIDGLCKSDRMDDACVV 478



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 116/400 (29%), Positives = 204/400 (51%), Gaps = 18/400 (4%)

Query: 190 KTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNG 249
           K ++ SY+ ++D L K G   +  +++ ++   G +P +V    LI G C AG       
Sbjct: 24  KHDVHSYNHLLDILVKSGHQFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQATRALE 83

Query: 250 LFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYC 309
               + +    P++  FN +I  L K G  ++A  L E M    +NPD FTYN+++ G C
Sbjct: 84  FLRALDEFSVAPDVYIFNFLIHGLFKDGNPDQAVKLFENMESSRVNPDIFTYNTVISGLC 143

Query: 310 LVGRIDTAREIFLSMHSKGCKHT--VVSYNILIN-GYCKILNVEEAMSLYRQIISNGVRQ 366
             G ++ ARE+   M  +G K    +V+YN LIN G CK  +VEEA+ +   +   G   
Sbjct: 144 KSGNLEKARELLEEMIRRGGKSAPDIVTYNTLINAGICKDGDVEEALEILDGMKLAGPAP 203

Query: 367 TVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLF 426
            VITYN+++  L  AG+   A ++   +K  +  PDL T+N L+DG CK   +  A+++ 
Sbjct: 204 DVITYNSIIHALCVAGRVVEAAEI---LKTMSCSPDLVTFNTLLDGFCKAGMLPRALEVL 260

Query: 427 HMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRK 486
             +        +  +  L++GLC+ G++  A+ L  ++ ++G +P V+ Y+ ++ GLC+ 
Sbjct: 261 EEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKS 320

Query: 487 GKLEKAN---------DFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEP 537
           G++E+A+         + L  M      P + T+N ++ G +++   SK V L+  +   
Sbjct: 321 GEIEEAHKLVKEMSAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLV-- 378

Query: 538 ERNLVPDDTTFSIVVDLLAKDEKYHE-CSAVSKSSYRACL 576
            R  VPD  T++ ++D L K  +  E C    + +   C 
Sbjct: 379 ARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASLGCF 418



 Score =  155 bits (392), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 119/419 (28%), Positives = 186/419 (44%), Gaps = 65/419 (15%)

Query: 49  CKSGIINLNEARYFFGYMTHM--QPSPPISSFNLLFGA-VAKNRHYDAVISFYRKLVSIG 105
           CKSG  NL +AR     M     + +P I ++N L  A + K+   +  +     +   G
Sbjct: 143 CKSG--NLEKARELLEEMIRRGGKSAPDIVTYNTLINAGICKDGDVEEALEILDGMKLAG 200

Query: 106 LLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRT 165
             PD +T N +I+        LCV  R+ EA  + K M      PD++T+ TL++GFC+ 
Sbjct: 201 PAPDVITYNSIIH-------ALCVAGRVVEAAEILKTM---SCSPDLVTFNTLLDGFCKA 250

Query: 166 GNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGIN 225
           G L  AL + ++M     EN L    ++ +Y+I+++ LC+ G V  A  L  E+  +G  
Sbjct: 251 GMLPRALEVLEEMCR---ENIL---PDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYI 304

Query: 226 PAVVVCTTLIHGFCCAGNWEEVNGLFIEML------------------------------ 255
           P V+  T+L+ G C +G  EE + L  EM                               
Sbjct: 305 PDVIAYTSLVDGLCKSGEIEEAHKLVKEMSAREILAEMVSINMVPPLFTYNIVLGGLIKD 364

Query: 256 -----------DLGPR---PNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTY 301
                      DL  R   P+++T+N +ID LCK  ++ EA  L + M   G  P+  T 
Sbjct: 365 GSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASLGCFPNDVTL 424

Query: 302 NSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIIS 361
            S++ G C VGR+D A  + + M  K     VV Y  LI+G CK   +++A  +   +  
Sbjct: 425 GSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACVVLDAMRG 484

Query: 362 NGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQ 420
            GV      Y  L+  +   G+   A  ++DEM      PD ST   L +    N+  +
Sbjct: 485 QGVALDDFAYRKLIVSMIHGGRVAEAMAMYDEMVARGFLPDGSTSKTLEEAAMSNSVFE 543



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 89/270 (32%), Positives = 143/270 (52%), Gaps = 8/270 (2%)

Query: 291 QRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVE 350
           Q G   D  +YN L+D     G      +++  +   GC   +V++ ILI G CK     
Sbjct: 20  QDGYKHDVHSYNHLLDILVKSGHQFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQAT 79

Query: 351 EAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILI 410
            A+   R +    V   V  +N L+ GLF+ G    A KLF+ M+   V PD+ TYN +I
Sbjct: 80  RALEFLRALDEFSVAPDVYIFNFLIHGLFKDGNPDQAVKLFENMESSRVNPDIFTYNTVI 139

Query: 411 DGLCKNNCVQEAVKLFHML--EMNKFEFGIEIFNCLID-GLCKAGRLDNAWELFHKLPQK 467
            GLCK+  +++A +L   +     K    I  +N LI+ G+CK G ++ A E+   +   
Sbjct: 140 SGLCKSGNLEKARELLEEMIRRGGKSAPDIVTYNTLINAGICKDGDVEEALEILDGMKLA 199

Query: 468 GLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKV 527
           G  P V+TY+ +IH LC  G++ +A + L  M    C+P++VTFNTL+ GF +     + 
Sbjct: 200 GPAPDVITYNSIIHALCVAGRVVEAAEILKTM---SCSPDLVTFNTLLDGFCKAGMLPRA 256

Query: 528 VELLHKMAEPERNLVPDDTTFSIVVDLLAK 557
           +E+L +M     N++PD  T++I+V+ L +
Sbjct: 257 LEVLEEMC--RENILPDVITYTILVNGLCR 284



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 94/343 (27%), Positives = 176/343 (51%), Gaps = 42/343 (12%)

Query: 258 GPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTA 317
           G + ++ ++N ++D L K G       + + ++  G +P+  T+  L+ G C  G+   A
Sbjct: 22  GYKHDVHSYNHLLDILVKSGHQFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQATRA 81

Query: 318 REIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSG 377
            E   ++        V  +N LI+G  K  N ++A+ L+  + S+ V   + TYNT++SG
Sbjct: 82  LEFLRALDEFSVAPDVYIFNFLIHGLFKDGNPDQAVKLFENMESSRVNPDIFTYNTVISG 141

Query: 378 LFQAGQAGYAQKLFDEM--KLYNVEPDLSTYNILID-GLCKNNCVQEAVKLFHMLEM--- 431
           L ++G    A++L +EM  +     PD+ TYN LI+ G+CK+  V+EA+++   +++   
Sbjct: 142 LCKSGNLEKARELLEEMIRRGGKSAPDIVTYNTLINAGICKDGDVEEALEILDGMKLAGP 201

Query: 432 -----------------NKFEFGIEI------------FNCLIDGLCKAGRLDNAWELFH 462
                             +     EI            FN L+DG CKAG L  A E+  
Sbjct: 202 APDVITYNSIIHALCVAGRVVEAAEILKTMSCSPDLVTFNTLLDGFCKAGMLPRALEVLE 261

Query: 463 KLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNN 522
           ++ ++ ++P V+TY+I+++GLCR G+++ A   L  + + G  P+V+ + +L+ G  ++ 
Sbjct: 262 EMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSG 321

Query: 523 KTSKVVELLHKMAEPE-------RNLVPDDTTFSIVVDLLAKD 558
           +  +  +L+ +M+  E        N+VP   T++IV+  L KD
Sbjct: 322 EIEEAHKLVKEMSAREILAEMVSINMVPPLFTYNIVLGGLIKD 364



 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 67/214 (31%), Positives = 110/214 (51%), Gaps = 9/214 (4%)

Query: 362 NGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQE 421
           +G +  V +YN LL  L ++G      K++ ++      P+L T+ ILI G CK      
Sbjct: 21  DGYKHDVHSYNHLLDILVKSGHQFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQATR 80

Query: 422 AVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIH 481
           A++    L+       + IFN LI GL K G  D A +LF  +    + P + TY+ +I 
Sbjct: 81  ALEFLRALDEFSVAPDVYIFNFLIHGLFKDGNPDQAVKLFENMESSRVNPDIFTYNTVIS 140

Query: 482 GLCRKGKLEKANDFLLYMEKNG--CAPNVVTFNTLMH-GFLQNNKTSKVVELLH--KMAE 536
           GLC+ G LEKA + L  M + G   AP++VT+NTL++ G  ++    + +E+L   K+A 
Sbjct: 141 GLCKSGNLEKARELLEEMIRRGGKSAPDIVTYNTLINAGICKDGDVEEALEILDGMKLAG 200

Query: 537 PERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKS 570
           P     PD  T++ ++  L    +  E + + K+
Sbjct: 201 P----APDVITYNSIIHALCVAGRVVEAAEILKT 230



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 40/137 (29%), Positives = 71/137 (51%), Gaps = 3/137 (2%)

Query: 422 AVKLFHML-EMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMI 480
           A++ F    E + ++  +  +N L+D L K+G      +++  L   G  P +VT+ I+I
Sbjct: 10  AIQFFDWAGEQDGYKHDVHSYNHLLDILVKSGHQFRTGKVYKDLLHSGCSPNLVTFKILI 69

Query: 481 HGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERN 540
            G C+ G+  +A +FL  +++   AP+V  FN L+HG  ++    + V+L   M     N
Sbjct: 70  RGNCKAGQATRALEFLRALDEFSVAPDVYIFNFLIHGLFKDGNPDQAVKLFENMESSRVN 129

Query: 541 LVPDDTTFSIVVDLLAK 557
             PD  T++ V+  L K
Sbjct: 130 --PDIFTYNTVISGLCK 144


>gi|225459022|ref|XP_002285611.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like isoform 1 [Vitis vinifera]
          Length = 610

 Score =  243 bits (619), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 144/496 (29%), Positives = 250/496 (50%), Gaps = 35/496 (7%)

Query: 85  VAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMI 144
           + +N   +    F   +V  G +PD +    LI       RG C   + K+ATW+ + + 
Sbjct: 124 LVRNGELEDGFKFLESMVYRGDIPDIIPCTSLI-------RGFCRIGKTKKATWVMEILE 176

Query: 145 AFGVRPDVITYGTLINGFCRTGNLSVALRLHKKM-VSGDY-----------ENGLISKT- 191
             G  PDVITY  LI+G+C++G +  AL++  +M V+ D            ++G + +  
Sbjct: 177 QSGAVPDVITYNVLISGYCKSGEIDNALQVLDRMNVAPDVVTYNTILRTLCDSGKLKQAM 236

Query: 192 -------------NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGF 238
                        ++ +Y+I+I++ CKE  V +A +L  EM+ +G  P VV    LI+G 
Sbjct: 237 EVLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGI 296

Query: 239 CCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDR 298
           C  G  +E       M   G +PN++T N+++  +C  G+  +A  LL  M+++G +P  
Sbjct: 297 CKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSV 356

Query: 299 FTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQ 358
            T+N L++  C  G +  A +I   M   GC    +SYN L++G+CK   ++ A+     
Sbjct: 357 VTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDI 416

Query: 359 IISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNC 418
           ++S G    ++TYNTLL+ L + G+   A ++ +++      P L TYN +IDGL K   
Sbjct: 417 MVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGK 476

Query: 419 VQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSI 478
            + A+KL   +     +  I  ++ L+ GL + G++D A + FH L   G+ P  +TY+ 
Sbjct: 477 TERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNS 536

Query: 479 MIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPE 538
           ++ GLC+  + ++A DFL YM    C P   T+  L+ G        + ++LL+++    
Sbjct: 537 IMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELC--S 594

Query: 539 RNLVPDDTTFSIVVDL 554
           R LV   +   + V +
Sbjct: 595 RGLVKKSSAEQVAVKM 610



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 130/461 (28%), Positives = 231/461 (50%), Gaps = 28/461 (6%)

Query: 122 NKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRL------- 174
           N  R L     +++     ++M+  G  PD+I   +LI GFCR G    A  +       
Sbjct: 119 NHLRRLVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQS 178

Query: 175 --------HKKMVSGDYENGLISKT-----------NIFSYSIIIDSLCKEGLVDKAKEL 215
                   +  ++SG  ++G I              ++ +Y+ I+ +LC  G + +A E+
Sbjct: 179 GAVPDVITYNVLISGYCKSGEIDNALQVLDRMNVAPDVVTYNTILRTLCDSGKLKQAMEV 238

Query: 216 FLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCK 275
                 +   P V+  T LI   C      +   L  EM + G +P+++T+NV+I+ +CK
Sbjct: 239 LDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICK 298

Query: 276 GGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVS 335
            G+++EA   L  M   G  P+  T+N ++   C  GR   A ++   M  KGC  +VV+
Sbjct: 299 EGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVT 358

Query: 336 YNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMK 395
           +NILIN  C+   +  A+ +  ++  +G     ++YN LL G  +  +   A +  D M 
Sbjct: 359 FNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMV 418

Query: 396 LYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLD 455
                PD+ TYN L+  LCK+  V  AV++ + L        +  +N +IDGL K G+ +
Sbjct: 419 SRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTE 478

Query: 456 NAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLM 515
            A +L  ++ +KGL P ++TYS ++ GL R+GK+++A  F   +E  G  PN +T+N++M
Sbjct: 479 RAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIM 538

Query: 516 HGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLA 556
            G  ++ +T + ++ L  M    +   P + T++I+++ +A
Sbjct: 539 LGLCKSRQTDRAIDFLAYMI--SKRCKPTEATYTILIEGIA 577



 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 115/386 (29%), Positives = 202/386 (52%), Gaps = 5/386 (1%)

Query: 203 LCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPN 262
           L + G ++   +    M  RG  P ++ CT+LI GFC  G  ++   +   +   G  P+
Sbjct: 124 LVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPD 183

Query: 263 LLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFL 322
           ++T+NV+I   CK G+I+ A   L+++ +  + PD  TYN+++   C  G++  A E+  
Sbjct: 184 VITYNVLISGYCKSGEIDNA---LQVLDRMNVAPDVVTYNTILRTLCDSGKLKQAMEVLD 240

Query: 323 SMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAG 382
               K C   V++Y ILI   CK   V +AM L  ++ + G +  V+TYN L++G+ + G
Sbjct: 241 RQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEG 300

Query: 383 QAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFN 442
           +   A K  + M  Y  +P++ T+NI++  +C      +A KL   +        +  FN
Sbjct: 301 RLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFN 360

Query: 443 CLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKN 502
            LI+ LC+ G L  A ++  K+P  G  P  ++Y+ ++HG C++ K+++A ++L  M   
Sbjct: 361 ILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSR 420

Query: 503 GCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYH 562
           GC P++VT+NTL+    ++ K    VE+L++++   +   P   T++ V+D L+K  K  
Sbjct: 421 GCYPDIVTYNTLLTALCKDGKVDVAVEILNQLS--SKGCSPVLITYNTVIDGLSKVGKTE 478

Query: 563 ECSAVSKSSYRACLYVTIFQPSSLGS 588
               +     R  L   I   SSL S
Sbjct: 479 RAIKLLDEMRRKGLKPDIITYSSLVS 504



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 107/388 (27%), Positives = 191/388 (49%), Gaps = 15/388 (3%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
           N  L   C SG   L +A          +  P + ++ +L  A  K       +    ++
Sbjct: 220 NTILRTLCDSG--KLKQAMEVLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEM 277

Query: 102 VSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLING 161
            + G  PD +T N+LIN       G+C E R+ EA     NM ++G +P+VIT+  ++  
Sbjct: 278 RNKGSKPDVVTYNVLIN-------GICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRS 330

Query: 162 FCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKG 221
            C TG    A +L   M+            ++ +++I+I+ LC++GL+ +A ++  +M  
Sbjct: 331 MCSTGRWMDAEKLLSDMLRKG------CSPSVVTFNILINFLCRQGLLGRAIDILEKMPM 384

Query: 222 RGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINE 281
            G  P  +    L+HGFC     +        M+  G  P+++T+N ++  LCK GK++ 
Sbjct: 385 HGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDV 444

Query: 282 ANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILIN 341
           A  +L  +  +G +P   TYN+++DG   VG+ + A ++   M  KG K  +++Y+ L++
Sbjct: 445 AVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVS 504

Query: 342 GYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEP 401
           G  +   V+EA+  +  +   G+R   ITYN+++ GL ++ Q   A      M     +P
Sbjct: 505 GLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKP 564

Query: 402 DLSTYNILIDGLCKNNCVQEAVKLFHML 429
             +TY ILI+G+      +EA+ L + L
Sbjct: 565 TEATYTILIEGIAYEGLAKEALDLLNEL 592



 Score = 66.2 bits (160), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 35/158 (22%), Positives = 80/158 (50%), Gaps = 11/158 (6%)

Query: 448 LCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPN 507
           L + G L++ ++    +  +G +P ++  + +I G CR GK +KA   +  +E++G  P+
Sbjct: 124 LVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPD 183

Query: 508 VVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAV 567
           V+T+N L+ G+ ++ +    +++L +M     N+ PD  T++ ++  L    K  +   V
Sbjct: 184 VITYNVLISGYCKSGEIDNALQVLDRM-----NVAPDVVTYNTILRTLCDSGKLKQAMEV 238

Query: 568 -SKSSYRAC-----LYVTIFQPSSLGSMIGCTVRLMPQ 599
             +   + C      Y  + + +   S +G  ++L+ +
Sbjct: 239 LDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDE 276


>gi|224069551|ref|XP_002326371.1| predicted protein [Populus trichocarpa]
 gi|222833564|gb|EEE72041.1| predicted protein [Populus trichocarpa]
          Length = 726

 Score =  243 bits (619), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 145/476 (30%), Positives = 250/476 (52%), Gaps = 24/476 (5%)

Query: 54  INLNEARYFFGYMTHMQPSP-------PISSFNLLFGAVAKNRHYDAVISFYRKLVSIGL 106
           +++++ R+   ++  M            + S+N L   +A+    D +   Y ++++  +
Sbjct: 151 VSVDDIRFLLDFLRQMNRDDNDIKFKLSVRSYNELLMMLARFLMIDEMKRVYTEMLNDMI 210

Query: 107 LPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTG 166
           +P+  TLN ++N +            I EA      +   G+ PD  TY +LI G+CR  
Sbjct: 211 VPNIYTLNTMVNAYSKM-------GNIVEANLYVSKIFQAGLSPDSFTYTSLILGYCRNN 263

Query: 167 NLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINP 226
           +++ A ++   M +         + N  SY+ II  LC+ G +D+   LF +M+     P
Sbjct: 264 DVNSAYKVFNMMPNKG------CRRNEVSYTTIIHGLCEAGRIDEGISLFKKMREDDCYP 317

Query: 227 AVVVCTTLIHGFCCAGNWEEVNG--LFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANG 284
            V   T +IH     GN   + G  LF EM +    PN+ T+ VM+D +CK  K++E+  
Sbjct: 318 TVRTYTVIIHAL--FGNDRNLEGMDLFNEMRERSCEPNVHTYTVMVDAMCKERKLDESRR 375

Query: 285 LLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYC 344
           +L  M+++GL P   TYN+L+ GYC  GRI+ A EI   M S  C+    +YN LI G+ 
Sbjct: 376 ILNEMMEKGLVPSVVTYNALIRGYCEEGRIEAALEILGLMESNNCRPNERTYNELICGFS 435

Query: 345 KILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLS 404
           K  +V +AM+L  +++ + +  +++TYN+L+    +AG    A KL D +K   + PD  
Sbjct: 436 KRKHVHKAMTLLSKMLESKLTPSLVTYNSLIHVQCKAGHFDSAYKLLDLLKENGLVPDQW 495

Query: 405 TYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKL 464
           TY++ ID LCK+  ++EA  LF+ L+    +    ++  LIDG CKAG++D A  L  ++
Sbjct: 496 TYSVFIDTLCKSKRMEEACDLFNSLKEKGIKANEVMYTALIDGHCKAGKIDEAISLLERM 555

Query: 465 PQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQ 520
             +  +P   TY+ +I+G+C++GK+++    +  M K G  P V T+  L+   L+
Sbjct: 556 HSEDCLPNSSTYNSLIYGVCKEGKVQEGLSMVENMSKMGVKPTVATYTILIEEMLR 611



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 129/492 (26%), Positives = 223/492 (45%), Gaps = 36/492 (7%)

Query: 56  LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNI 115
           ++E +  +  M +    P I + N +  A +K  +      +  K+   GL PD  T   
Sbjct: 195 IDEMKRVYTEMLNDMIVPNIYTLNTMVNAYSKMGNIVEANLYVSKIFQAGLSPDSFTYTS 254

Query: 116 LINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLH 175
           LI        G C  N +  A  +F  M   G R + ++Y T+I+G C  G +   + L 
Sbjct: 255 LI-------LGYCRNNDVNSAYKVFNMMPNKGCRRNEVSYTTIIHGLCEAGRIDEGISLF 307

Query: 176 KKMVSGDYENGLISKT-----------------------------NIFSYSIIIDSLCKE 206
           KKM   D    + + T                             N+ +Y++++D++CKE
Sbjct: 308 KKMREDDCYPTVRTYTVIIHALFGNDRNLEGMDLFNEMRERSCEPNVHTYTVMVDAMCKE 367

Query: 207 GLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTF 266
             +D+++ +  EM  +G+ P+VV    LI G+C  G  E    +   M     RPN  T+
Sbjct: 368 RKLDESRRILNEMMEKGLVPSVVTYNALIRGYCEEGRIEAALEILGLMESNNCRPNERTY 427

Query: 267 NVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHS 326
           N +I    K   +++A  LL  M++  L P   TYNSL+   C  G  D+A ++   +  
Sbjct: 428 NELICGFSKRKHVHKAMTLLSKMLESKLTPSLVTYNSLIHVQCKAGHFDSAYKLLDLLKE 487

Query: 327 KGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGY 386
            G      +Y++ I+  CK   +EEA  L+  +   G++   + Y  L+ G  +AG+   
Sbjct: 488 NGLVPDQWTYSVFIDTLCKSKRMEEACDLFNSLKEKGIKANEVMYTALIDGHCKAGKIDE 547

Query: 387 AQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLID 446
           A  L + M   +  P+ STYN LI G+CK   VQE + +   +     +  +  +  LI+
Sbjct: 548 AISLLERMHSEDCLPNSSTYNSLIYGVCKEGKVQEGLSMVENMSKMGVKPTVATYTILIE 607

Query: 447 GLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAP 506
            + + G  D+A  +F+++   G  P V TY+  IH  C  G +++A   +  M + G  P
Sbjct: 608 EMLREGDFDHANRVFNQMVSFGHKPDVYTYTAFIHTYCTSGNVKEAEGMMARMIEAGVMP 667

Query: 507 NVVTFNTLMHGF 518
           + +T+  L+  +
Sbjct: 668 DSLTYTLLISAY 679



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 101/353 (28%), Positives = 163/353 (46%), Gaps = 68/353 (19%)

Query: 245 EEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSL 304
           +E+  ++ EML+    PN+ T N M++   K G I EAN  +  + Q GL+PD FTY SL
Sbjct: 196 DEMKRVYTEMLNDMIVPNIYTLNTMVNAYSKMGNIVEANLYVSKIFQAGLSPDSFTYTSL 255

Query: 305 MDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGV 364
                                              I GYC+  +V  A  ++  + + G 
Sbjct: 256 -----------------------------------ILGYCRNNDVNSAYKVFNMMPNKGC 280

Query: 365 RQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVK 424
           R+  ++Y T++ GL +AG+      LF +M+  +  P + TY ++I  L  N+   E + 
Sbjct: 281 RRNEVSYTTIIHGLCEAGRIDEGISLFKKMREDDCYPTVRTYTVIIHALFGNDRNLEGMD 340

Query: 425 LFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLC 484
           LF+ +     E  +  +  ++D +CK  +LD +  + +++ +KGLVP+VVTY+ +I G C
Sbjct: 341 LFNEMRERSCEPNVHTYTVMVDAMCKERKLDESRRILNEMMEKGLVPSVVTYNALIRGYC 400

Query: 485 RKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEP------- 537
            +G++E A + L  ME N C PN  T+N L+ GF +     K + LL KM E        
Sbjct: 401 EEGRIEAALEILGLMESNNCRPNERTYNELICGFSKRKHVHKAMTLLSKMLESKLTPSLV 460

Query: 538 --------------------------ERNLVPDDTTFSIVVDLLAKDEKYHEC 564
                                     E  LVPD  T+S+ +D L K ++  E 
Sbjct: 461 TYNSLIHVQCKAGHFDSAYKLLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEA 513


>gi|147833323|emb|CAN61988.1| hypothetical protein VITISV_026694 [Vitis vinifera]
          Length = 553

 Score =  243 bits (619), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 144/496 (29%), Positives = 250/496 (50%), Gaps = 35/496 (7%)

Query: 85  VAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMI 144
           + +N   +    F   +V  G +PD +    LI       RG C   + K+ATW+ + + 
Sbjct: 67  LVRNGELEDGFKFLESMVYRGDIPDIIPCTSLI-------RGFCRIGKTKKATWVMEILE 119

Query: 145 AFGVRPDVITYGTLINGFCRTGNLSVALRLHKKM-VSGDY-----------ENGLISKT- 191
             G  PDVITY  LI+G+C++G +  AL++  +M V+ D            ++G + +  
Sbjct: 120 QSGAVPDVITYNVLISGYCKSGEIDNALQVLDRMNVAPDVVTYNTILRTLCDSGKLKQAM 179

Query: 192 -------------NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGF 238
                        ++ +Y+I+I++ CKE  V +A +L  EM+ +G  P VV    LI+G 
Sbjct: 180 EVLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGI 239

Query: 239 CCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDR 298
           C  G  +E       M   G +PN++T N+++  +C  G+  +A  LL  M+++G +P  
Sbjct: 240 CKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSV 299

Query: 299 FTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQ 358
            T+N L++  C  G +  A +I   M   GC    +SYN L++G+CK   ++ A+     
Sbjct: 300 VTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDI 359

Query: 359 IISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNC 418
           ++S G    ++TYNTLL+ L + G+   A ++ +++      P L TYN +IDGL K   
Sbjct: 360 MVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGK 419

Query: 419 VQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSI 478
            + A+KL   +     +  I  ++ L+ GL + G++D A + FH L   G+ P  +TY+ 
Sbjct: 420 TERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNS 479

Query: 479 MIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPE 538
           ++ GLC+  + ++A DFL YM    C P   T+  L+ G        + ++LL+++    
Sbjct: 480 IMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELC--S 537

Query: 539 RNLVPDDTTFSIVVDL 554
           R LV   +   + V +
Sbjct: 538 RGLVKKSSAEQVAVKM 553



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 130/461 (28%), Positives = 231/461 (50%), Gaps = 28/461 (6%)

Query: 122 NKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRL------- 174
           N  R L     +++     ++M+  G  PD+I   +LI GFCR G    A  +       
Sbjct: 62  NHLRRLVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQS 121

Query: 175 --------HKKMVSGDYENGLISKT-----------NIFSYSIIIDSLCKEGLVDKAKEL 215
                   +  ++SG  ++G I              ++ +Y+ I+ +LC  G + +A E+
Sbjct: 122 GAVPDVITYNVLISGYCKSGEIDNALQVLDRMNVAPDVVTYNTILRTLCDSGKLKQAMEV 181

Query: 216 FLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCK 275
                 +   P V+  T LI   C      +   L  EM + G +P+++T+NV+I+ +CK
Sbjct: 182 LDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICK 241

Query: 276 GGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVS 335
            G+++EA   L  M   G  P+  T+N ++   C  GR   A ++   M  KGC  +VV+
Sbjct: 242 EGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVT 301

Query: 336 YNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMK 395
           +NILIN  C+   +  A+ +  ++  +G     ++YN LL G  +  +   A +  D M 
Sbjct: 302 FNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMV 361

Query: 396 LYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLD 455
                PD+ TYN L+  LCK+  V  AV++ + L        +  +N +IDGL K G+ +
Sbjct: 362 SRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTE 421

Query: 456 NAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLM 515
            A +L  ++ +KGL P ++TYS ++ GL R+GK+++A  F   +E  G  PN +T+N++M
Sbjct: 422 RAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIM 481

Query: 516 HGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLA 556
            G  ++ +T + ++ L  M    +   P + T++I+++ +A
Sbjct: 482 LGLCKSRQTDRAIDFLAYMI--SKRCKPTEATYTILIEGIA 520



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 115/386 (29%), Positives = 202/386 (52%), Gaps = 5/386 (1%)

Query: 203 LCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPN 262
           L + G ++   +    M  RG  P ++ CT+LI GFC  G  ++   +   +   G  P+
Sbjct: 67  LVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPD 126

Query: 263 LLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFL 322
           ++T+NV+I   CK G+I+ A   L+++ +  + PD  TYN+++   C  G++  A E+  
Sbjct: 127 VITYNVLISGYCKSGEIDNA---LQVLDRMNVAPDVVTYNTILRTLCDSGKLKQAMEVLD 183

Query: 323 SMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAG 382
               K C   V++Y ILI   CK   V +AM L  ++ + G +  V+TYN L++G+ + G
Sbjct: 184 RQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEG 243

Query: 383 QAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFN 442
           +   A K  + M  Y  +P++ T+NI++  +C      +A KL   +        +  FN
Sbjct: 244 RLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFN 303

Query: 443 CLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKN 502
            LI+ LC+ G L  A ++  K+P  G  P  ++Y+ ++HG C++ K+++A ++L  M   
Sbjct: 304 ILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSR 363

Query: 503 GCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYH 562
           GC P++VT+NTL+    ++ K    VE+L++++   +   P   T++ V+D L+K  K  
Sbjct: 364 GCYPDIVTYNTLLTALCKDGKVDVAVEILNQLS--SKGCSPVLITYNTVIDGLSKVGKTE 421

Query: 563 ECSAVSKSSYRACLYVTIFQPSSLGS 588
               +     R  L   I   SSL S
Sbjct: 422 RAIKLLDEMRRKGLKPDIITYSSLVS 447



 Score =  178 bits (451), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 107/388 (27%), Positives = 191/388 (49%), Gaps = 15/388 (3%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
           N  L   C SG   L +A          +  P + ++ +L  A  K       +    ++
Sbjct: 163 NTILRTLCDSG--KLKQAMEVLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEM 220

Query: 102 VSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLING 161
            + G  PD +T N+LIN       G+C E R+ EA     NM ++G +P+VIT+  ++  
Sbjct: 221 RNKGSKPDVVTYNVLIN-------GICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRS 273

Query: 162 FCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKG 221
            C TG    A +L   M+            ++ +++I+I+ LC++GL+ +A ++  +M  
Sbjct: 274 MCSTGRWMDAEKLLSDMLRKG------CSPSVVTFNILINFLCRQGLLGRAIDILEKMPM 327

Query: 222 RGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINE 281
            G  P  +    L+HGFC     +        M+  G  P+++T+N ++  LCK GK++ 
Sbjct: 328 HGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDV 387

Query: 282 ANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILIN 341
           A  +L  +  +G +P   TYN+++DG   VG+ + A ++   M  KG K  +++Y+ L++
Sbjct: 388 AVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVS 447

Query: 342 GYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEP 401
           G  +   V+EA+  +  +   G+R   ITYN+++ GL ++ Q   A      M     +P
Sbjct: 448 GLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKP 507

Query: 402 DLSTYNILIDGLCKNNCVQEAVKLFHML 429
             +TY ILI+G+      +EA+ L + L
Sbjct: 508 TEATYTILIEGIAYEGLAKEALDLLNEL 535



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 35/158 (22%), Positives = 80/158 (50%), Gaps = 11/158 (6%)

Query: 448 LCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPN 507
           L + G L++ ++    +  +G +P ++  + +I G CR GK +KA   +  +E++G  P+
Sbjct: 67  LVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPD 126

Query: 508 VVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAV 567
           V+T+N L+ G+ ++ +    +++L +M     N+ PD  T++ ++  L    K  +   V
Sbjct: 127 VITYNVLISGYCKSGEIDNALQVLDRM-----NVAPDVVTYNTILRTLCDSGKLKQAMEV 181

Query: 568 -SKSSYRAC-----LYVTIFQPSSLGSMIGCTVRLMPQ 599
             +   + C      Y  + + +   S +G  ++L+ +
Sbjct: 182 LDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDE 219


>gi|302754868|ref|XP_002960858.1| hypothetical protein SELMODRAFT_75631 [Selaginella moellendorffii]
 gi|300171797|gb|EFJ38397.1| hypothetical protein SELMODRAFT_75631 [Selaginella moellendorffii]
          Length = 699

 Score =  243 bits (619), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 157/513 (30%), Positives = 245/513 (47%), Gaps = 81/513 (15%)

Query: 127 LCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENG 186
           LC  NR +EA  LF+N +A    P+  TYG LI GF   G+L +A++L ++M S  +E  
Sbjct: 32  LCRLNRRQEALALFRNAMARICMPNKFTYGILIRGFSSAGDLDIAIQLLEEMKSSGFEG- 90

Query: 187 LISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEE 246
                N   ++ ++  LC  G V +A E F  M  +   P V+  T L+H  C AG ++E
Sbjct: 91  -----NAVVHTTLMKGLCDAGRVVEALEHFRAM-AKDCAPDVMTYTALVHALCKAGKFDE 144

Query: 247 VNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGL------------ 294
             G+  EM+  G  P+ +TF+ +ID LCK G   +A  +LE +IQRG+            
Sbjct: 145 AQGMLREMVAQGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDVIQRGMGNSDAAFETIIQ 204

Query: 295 ------------------------NPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCK 330
                                    P    +N +++G+C    +D+A ++   M  KGC 
Sbjct: 205 RLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCV 264

Query: 331 HTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKL 390
             V ++ ILI G CK   V EA  L  +++  G    V+TY+T+++GL + GQ   A +L
Sbjct: 265 PNVFTFTILITGLCKANRVGEAQQLLEKMVMGGCSPNVVTYSTVINGLCKQGQVDDAYEL 324

Query: 391 FDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCK 450
           F  M+  N  P++ T+NILIDGLCK   ++EA +L+H +        I  +N LIDGLCK
Sbjct: 325 FQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCK 384

Query: 451 AGRLDNAWELFHKLPQKGL-VPTVVTYSIMIHGLCRKGKLEKA-------------NDFL 496
           + ++D A++LF  +P+ G+     VTYS + HG    G++  A              D  
Sbjct: 385 SFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLA 444

Query: 497 LY----------------------MEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKM 534
            Y                      M   G  P V T + ++ G  + N T + ++L   M
Sbjct: 445 TYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHTERAIQLFDSM 504

Query: 535 AEPERNLVPDDTTFSIVVDLLAKDEKYHECSAV 567
           A   R    D   +++VV+ +A+  K+ +  AV
Sbjct: 505 A--ARGCTDDALIYNLVVEGMARASKHDKALAV 535



 Score =  218 bits (556), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 145/490 (29%), Positives = 229/490 (46%), Gaps = 54/490 (11%)

Query: 101 LVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLIN 160
           +++ G  P  L  N++IN       G C    +  A  L + MI  G  P+V T+  LI 
Sbjct: 223 VIAKGFTPTVLMFNLVIN-------GFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILIT 275

Query: 161 GFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMK 220
           G C+   +  A +L +KMV G          N+ +YS +I+ LCK+G VD A ELF  M+
Sbjct: 276 GLCKANRVGEAQQLLEKMVMGG------CSPNVVTYSTVINGLCKQGQVDDAYELFQLME 329

Query: 221 GRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKIN 280
            R   P VV    LI G C A   EE   L+  M + G  P+++T+N +ID LCK  +++
Sbjct: 330 RRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVD 389

Query: 281 EANGLLELMIQRGLNP-DRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNIL 339
           EA  L + + + G++  +  TY++L  GY  +GR+  A  IF  +  KG    + +Y  L
Sbjct: 390 EAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSL 449

Query: 340 INGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNV 399
           I  YCK     E + L  ++ S G    V T + +L GLF+      A +LFD M     
Sbjct: 450 ILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAARGC 509

Query: 400 EPDLSTYNILIDG--------------------------------------LCKNNCVQE 421
             D   YN++++G                                      LC+     +
Sbjct: 510 TDDALIYNLVVEGMARASKHDKALAVLEQVIDKRDRKFNPSSSAVDALVESLCQVGKTDD 569

Query: 422 AVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIH 481
           A +L H +    F   +  +N L+ GL +  R D A ++F  +   G  P + T +++I 
Sbjct: 570 AKQLLHKMSERGFAAAVSSYNRLLSGLSRLQRWDEATQVFEAMVSAGPAPEISTVNVVIS 629

Query: 482 GLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNL 541
            LC   K++ A + +  M K GC P++ T NTL+ G+ ++ +     +LL +M E    L
Sbjct: 630 WLCSAAKVDDAYELVQRMSKLGCCPDIETCNTLIGGYCKSGRADLARKLLEEMTEA--GL 687

Query: 542 VPDDTTFSIV 551
            P+DTT  ++
Sbjct: 688 EPNDTTHDLL 697



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 115/432 (26%), Positives = 202/432 (46%), Gaps = 73/432 (16%)

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
           N+FS +  +D LC+     +A  LF     R   P       LI GF  AG+ +    L 
Sbjct: 21  NVFSCNCALDMLCRLNRRQEALALFRNAMARICMPNKFTYGILIRGFSSAGDLDIAIQLL 80

Query: 252 IEMLDLGPR----------------------------------PNLLTFNVMIDCLCKGG 277
            EM   G                                    P+++T+  ++  LCK G
Sbjct: 81  EEMKSSGFEGNAVVHTTLMKGLCDAGRVVEALEHFRAMAKDCAPDVMTYTALVHALCKAG 140

Query: 278 KINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG------------------------- 312
           K +EA G+L  M+ +G  PD  T+++L+DG C  G                         
Sbjct: 141 KFDEAQGMLREMVAQGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDVIQRGMGNSDAAFE 200

Query: 313 -----------RIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIIS 361
                       ++ A ++   + +KG   TV+ +N++ING+CK  +++ A  L   +I 
Sbjct: 201 TIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIE 260

Query: 362 NGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQE 421
            G    V T+  L++GL +A + G AQ+L ++M +    P++ TY+ +I+GLCK   V +
Sbjct: 261 KGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVMGGCSPNVVTYSTVINGLCKQGQVDD 320

Query: 422 AVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIH 481
           A +LF ++E       +   N LIDGLCKA R++ A +L+H++ + G  P ++TY+ +I 
Sbjct: 321 AYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLID 380

Query: 482 GLCRKGKLEKANDFLLYMEKNG-CAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERN 540
           GLC+  ++++A      + ++G  A N VT++TL HG+    + +    +   +   ++ 
Sbjct: 381 GLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLV--DKG 438

Query: 541 LVPDDTTFSIVV 552
             PD  T++ ++
Sbjct: 439 FSPDLATYTSLI 450



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 102/350 (29%), Positives = 176/350 (50%), Gaps = 4/350 (1%)

Query: 215 LFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLC 274
           LF +     +   V  C   +   C     +E   LF   +     PN  T+ ++I    
Sbjct: 9   LFFDWARSRVGHNVFSCNCALDMLCRLNRRQEALALFRNAMARICMPNKFTYGILIRGFS 68

Query: 275 KGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVV 334
             G ++ A  LLE M   G   +   + +LM G C  GR+  A E F +M +K C   V+
Sbjct: 69  SAGDLDIAIQLLEEMKSSGFEGNAVVHTTLMKGLCDAGRVVEALEHFRAM-AKDCAPDVM 127

Query: 335 SYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEM 394
           +Y  L++  CK    +EA  + R++++ G     +T++TL+ GL + G    A ++ +++
Sbjct: 128 TYTALVHALCKAGKFDEAQGMLREMVAQGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDV 187

Query: 395 KLYNVEPDLSTYNILIDGLC-KNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGR 453
               +    + +  +I  LC K N V+ A K+  ++    F   + +FN +I+G CKA  
Sbjct: 188 IQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKD 247

Query: 454 LDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNT 513
           LD+A++L   + +KG VP V T++I+I GLC+  ++ +A   L  M   GC+PNVVT++T
Sbjct: 248 LDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVMGGCSPNVVTYST 307

Query: 514 LMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
           +++G  +  +     EL   M    RN  P+  T +I++D L K ++  E
Sbjct: 308 VINGLCKQGQVDDAYELFQLM--ERRNCPPNVVTHNILIDGLCKAKRIEE 355



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 106/395 (26%), Positives = 181/395 (45%), Gaps = 23/395 (5%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CK G   +++A   F  M      P + + N+L   + K +  +     Y ++   G  P
Sbjct: 313 CKQG--QVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAP 370

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVR-PDVITYGTLINGFCRTGN 167
           D +T N LI+       GLC   ++ EA  LF+ +   GV   + +TY TL +G+   G 
Sbjct: 371 DIITYNSLID-------GLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGR 423

Query: 168 LSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPA 227
           ++ A R+   +V   +        ++ +Y+ +I   CK     +  EL  EM  +G  P 
Sbjct: 424 MADACRIFSMLVDKGF------SPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPR 477

Query: 228 VVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLE 287
           V   + ++ G     + E    LF  M   G   + L +N++++ + +  K ++A  +LE
Sbjct: 478 VNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHDKALAVLE 537

Query: 288 LMI---QRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYC 344
            +I    R  NP     ++L++  C VG+ D A+++   M  +G    V SYN L++G  
Sbjct: 538 QVIDKRDRKFNPSSSAVDALVESLCQVGKTDDAKQLLHKMSERGFAAAVSSYNRLLSGLS 597

Query: 345 KILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLS 404
           ++   +EA  ++  ++S G    + T N ++S L  A +   A +L   M      PD+ 
Sbjct: 598 RLQRWDEATQVFEAMVSAGPAPEISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCPDIE 657

Query: 405 TYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIE 439
           T N LI G CK+     A KL    EM   E G+E
Sbjct: 658 TCNTLIGGYCKSGRADLARKLLE--EMT--EAGLE 688



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 77/284 (27%), Positives = 129/284 (45%), Gaps = 10/284 (3%)

Query: 56  LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNI 115
           + +A   F  +     SP ++++  L     K      V+    ++ S G  P   TL+ 
Sbjct: 424 MADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSA 483

Query: 116 LINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLH 175
           ++        GL   N  + A  LF +M A G   D + Y  ++ G  R      AL + 
Sbjct: 484 VLG-------GLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHDKALAVL 536

Query: 176 KKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLI 235
           ++++         S + +     +++SLC+ G  D AK+L  +M  RG   AV     L+
Sbjct: 537 EQVIDKRDRKFNPSSSAV---DALVESLCQVGKTDDAKQLLHKMSERGFAAAVSSYNRLL 593

Query: 236 HGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLN 295
            G      W+E   +F  M+  GP P + T NV+I  LC   K+++A  L++ M + G  
Sbjct: 594 SGLSRLQRWDEATQVFEAMVSAGPAPEISTVNVVISWLCSAAKVDDAYELVQRMSKLGCC 653

Query: 296 PDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNIL 339
           PD  T N+L+ GYC  GR D AR++   M   G +    ++++L
Sbjct: 654 PDIETCNTLIGGYCKSGRADLARKLLEEMTEAGLEPNDTTHDLL 697



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 61/206 (29%), Positives = 94/206 (45%), Gaps = 5/206 (2%)

Query: 364 VRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAV 423
           V   V + N  L  L +  +   A  LF         P+  TY ILI G      +  A+
Sbjct: 18  VGHNVFSCNCALDMLCRLNRRQEALALFRNAMARICMPNKFTYGILIRGFSSAGDLDIAI 77

Query: 424 KLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGL 483
           +L   ++ + FE    +   L+ GLC AGR+  A E F  +  K   P V+TY+ ++H L
Sbjct: 78  QLLEEMKSSGFEGNAVVHTTLMKGLCDAGRVVEALEHFRAMA-KDCAPDVMTYTALVHAL 136

Query: 484 CRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVP 543
           C+ GK ++A   L  M   GCAP+ VTF+TL+ G  +     +   +L  +   +R +  
Sbjct: 137 CKAGKFDEAQGMLREMVAQGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDVI--QRGMGN 194

Query: 544 DDTTFSIVVDLLAKDEKYHECSAVSK 569
            D  F  ++  L    KY+     SK
Sbjct: 195 SDAAFETIIQRLCN--KYNSVELASK 218



 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 42/143 (29%), Positives = 62/143 (43%), Gaps = 3/143 (2%)

Query: 421 EAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMI 480
           E V LF     ++    +   NC +D LC+  R   A  LF     +  +P   TY I+I
Sbjct: 5   ELVLLFFDWARSRVGHNVFSCNCALDMLCRLNRRQEALALFRNAMARICMPNKFTYGILI 64

Query: 481 HGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERN 540
            G    G L+ A   L  M+ +G   N V   TLM G     +  + +E    MA   ++
Sbjct: 65  RGFSSAGDLDIAIQLLEEMKSSGFEGNAVVHTTLMKGLCDAGRVVEALEHFRAMA---KD 121

Query: 541 LVPDDTTFSIVVDLLAKDEKYHE 563
             PD  T++ +V  L K  K+ E
Sbjct: 122 CAPDVMTYTALVHALCKAGKFDE 144


>gi|359476104|ref|XP_003631789.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Vitis vinifera]
          Length = 877

 Score =  243 bits (619), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 149/519 (28%), Positives = 270/519 (52%), Gaps = 52/519 (10%)

Query: 70  QPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCV 129
           +P   + + +L+ G  A+  + D+ ++ + K+   GL P+ +T ++LI        G C 
Sbjct: 361 KPMNLVVATSLMKGYCAQG-NLDSALNLFNKITEDGLFPNKVTYSVLI-------EGCCN 412

Query: 130 ENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLIS 189
              I++A+ L+  M   G+ P V    +L+ G+ +      A +L  + V          
Sbjct: 413 SGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVD-------CG 465

Query: 190 KTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNG 249
             NIF+Y+I++  LCK G +D+A  L   M  +G+ P VV    +I G C  GN +  + 
Sbjct: 466 VANIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASS 525

Query: 250 LFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYC 309
           +F +ML    +PN++T++++ID   K G   +A  L + M+   + P  FT+N++++G C
Sbjct: 526 VFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLC 585

Query: 310 LVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVI 369
            VG++  AR+   +   +G   + ++YN +++G+ K  N++ A+++YR++   GV   V+
Sbjct: 586 KVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVV 645

Query: 370 TYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHML 429
           TY +L++G  ++ +   A K  DEM+   +E D++ Y+ LIDG CK   ++ A  LF  L
Sbjct: 646 TYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFEL 705

Query: 430 --------------------EMNKFEFGI---------------EIFNCLIDGLCKAGRL 454
                               ++N  E  +                 +  LIDGL K GRL
Sbjct: 706 LEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRL 765

Query: 455 DNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTL 514
             A +L+ ++  KG+VP ++T+ ++++GLC KG+LE A   L  M++    P+V+ +NTL
Sbjct: 766 VFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTL 825

Query: 515 MHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
           + G+ +     +   L  +M   +R LVPDD T+ I+++
Sbjct: 826 IAGYFREGNLKEAFTLHDEML--DRGLVPDDVTYDILIN 862



 Score =  218 bits (556), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 140/476 (29%), Positives = 240/476 (50%), Gaps = 16/476 (3%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           C SG  N+ +A   +  M      P + + N L     K   ++     + + V  G+  
Sbjct: 411 CNSG--NIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGV-A 467

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           +  T NI+++        LC   ++ EA  L  NM+  G+ P+V++Y  +I G CR GN+
Sbjct: 468 NIFTYNIMMSW-------LCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNM 520

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
            +A  +   M++ D       K N+ +YSI+ID   K+G  +KA +LF +M    I P  
Sbjct: 521 DMASSVFSDMLARDL------KPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTD 574

Query: 229 VVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLEL 288
               T+I+G C  G   E        L+ G  P+ +T+N ++D   K G I+ A  +   
Sbjct: 575 FTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYRE 634

Query: 289 MIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILN 348
           M + G++P+  TY SL++G+C   RID A +    M  KG +  V +Y+ LI+G+CK  +
Sbjct: 635 MCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRD 694

Query: 349 VEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNI 408
           +E A  L+ +++  G+    I YN+++SG         A   + +M    +  DL TY  
Sbjct: 695 MESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTT 754

Query: 409 LIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKG 468
           LIDGL K   +  A  L+  +        I  F+ L++GLC  G+L+NA ++  ++ +K 
Sbjct: 755 LIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKILEEMDRKN 814

Query: 469 LVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKT 524
           + P+V+ Y+ +I G  R+G L++A      M   G  P+ VT++ L++G  + +++
Sbjct: 815 MTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRGLVPDDVTYDILINGKFKGDRS 870



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 159/545 (29%), Positives = 242/545 (44%), Gaps = 31/545 (5%)

Query: 34  VSSPETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDA 93
           V+ P++ L  F     + G I   +A     ++    P     +  LL   V+ +     
Sbjct: 111 VNDPQSALRYFKRAETQRGFIRGVDAYCVLLHILMRSPETHGHARKLLNRYVSGDSDPSP 170

Query: 94  VISFYRKLVSIGLLPDF----LTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVR 149
           V+ F   L++     DF       N L+N +          NRI+ A   F  MI   V 
Sbjct: 171 VV-FVDHLINCAKRFDFELDHRVFNYLLNAY-------IRANRIENAIDCFNAMICQDVI 222

Query: 150 PDVITYGTLINGFCRTGNLSVALRLHKKMV----SGDYENGLISKTNIFSYSIIIDSLCK 205
           P V     L+    R   +     L+ KMV     GD+          F+  +++ +  K
Sbjct: 223 PWVPYMNILLTALVRRNMIGELRDLYNKMVLRGIYGDH----------FTVHVMVRACLK 272

Query: 206 EGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLT 265
           EG V++A+E F E K RG+       + +I   C   N      L  EM + G  P+  T
Sbjct: 273 EGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNSNLGLELLEEMKERGWVPSEAT 332

Query: 266 F-NVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSM 324
           F +V++ C+ +G  + EA  L E MI  G   +     SLM GYC  G +D+A  +F  +
Sbjct: 333 FTSVIVACVAQGNMV-EALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKI 391

Query: 325 HSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQA 384
              G     V+Y++LI G C   N+E+A  LY Q+  NG+  +V   N+LL G  +A   
Sbjct: 392 TEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLW 451

Query: 385 GYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCL 444
             A KLFDE     V  ++ TYNI++  LCK   + EA  L   +        +  +N +
Sbjct: 452 EEASKLFDEAVDCGVA-NIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDM 510

Query: 445 IDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGC 504
           I G C+ G +D A  +F  +  + L P VVTYSI+I G  +KG  EKA D    M     
Sbjct: 511 ILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNI 570

Query: 505 APNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHEC 564
           AP   TFNT+++G  +  + S+  + L      E   +P   T++ +VD   K+      
Sbjct: 571 APTDFTFNTIINGLCKVGQMSEARDKLKNFL--EEGFIPSCMTYNSIVDGFIKEGNIDSA 628

Query: 565 SAVSK 569
            AV +
Sbjct: 629 LAVYR 633


>gi|224109914|ref|XP_002333182.1| predicted protein [Populus trichocarpa]
 gi|222835036|gb|EEE73485.1| predicted protein [Populus trichocarpa]
          Length = 319

 Score =  242 bits (618), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 121/299 (40%), Positives = 192/299 (64%), Gaps = 7/299 (2%)

Query: 261 PNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREI 320
           P+ +TFN+++D LCK GKI+EA G+++ MI++G+ P+  TY+SLM+GY L  R+  AR++
Sbjct: 8   PDAVTFNILVDTLCKKGKISEAQGIVKTMIEKGVEPNTVTYSSLMNGYLLQNRVFEARKV 67

Query: 321 FLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQ 380
           F +M ++GC   V+SYNILING CK   ++EA  ++ ++   G+     TYNTLL G ++
Sbjct: 68  FNAMITRGCIPDVLSYNILINGCCKAQRIDEAKQIFDEMSFRGLIPNTATYNTLLGGFWK 127

Query: 381 AGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEI 440
                   +LF +M      PDL TY+I + GL K   + +A++LF  ++ N     + I
Sbjct: 128 Q-----KIQLFKDMHAQGCSPDLVTYSIFLHGLSKQGYLDQALELFREMQNNYLNPDLVI 182

Query: 441 FNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYME 500
           +N LID +CK+G+L++A ELF KL  KGL+P V +++ +I GLCR+G L++A      ME
Sbjct: 183 YNILIDAMCKSGKLEDARELFLKLHVKGLLPDVRSWTSIISGLCREGLLDEAYKAFRQME 242

Query: 501 KNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDE 559
           ++GC P+  ++N ++ GFLQNN  S+  +L  +M   +R    D  T ++  DLL+KD+
Sbjct: 243 RDGCPPDCCSYNVIVRGFLQNNGASRAEQLFQEMF--DRGFSADALTRTLAADLLSKDD 299



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 103/317 (32%), Positives = 168/317 (52%), Gaps = 18/317 (5%)

Query: 101 LVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLIN 160
           + S  ++PD +T NIL++        LC + +I EA  + K MI  GV P+ +TY +L+N
Sbjct: 1   MTSFIIMPDAVTFNILVDT-------LCKKGKISEAQGIVKTMIEKGVEPNTVTYSSLMN 53

Query: 161 GFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMK 220
           G+     +  A ++   M++     G I   ++ SY+I+I+  CK   +D+AK++F EM 
Sbjct: 54  GYLLQNRVFEARKVFNAMIT----RGCIP--DVLSYNILINGCCKAQRIDEAKQIFDEMS 107

Query: 221 GRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKIN 280
            RG+ P      TL+ GF     W++   LF +M   G  P+L+T+++ +  L K G ++
Sbjct: 108 FRGLIPNTATYNTLLGGF-----WKQKIQLFKDMHAQGCSPDLVTYSIFLHGLSKQGYLD 162

Query: 281 EANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILI 340
           +A  L   M    LNPD   YN L+D  C  G+++ ARE+FL +H KG    V S+  +I
Sbjct: 163 QALELFREMQNNYLNPDLVIYNILIDAMCKSGKLEDARELFLKLHVKGLLPDVRSWTSII 222

Query: 341 NGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVE 400
           +G C+   ++EA   +RQ+  +G      +YN ++ G  Q   A  A++LF EM      
Sbjct: 223 SGLCREGLLDEAYKAFRQMERDGCPPDCCSYNVIVRGFLQNNGASRAEQLFQEMFDRGFS 282

Query: 401 PDLSTYNILIDGLCKNN 417
            D  T  +  D L K++
Sbjct: 283 ADALTRTLAADLLSKDD 299



 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 84/305 (27%), Positives = 148/305 (48%), Gaps = 18/305 (5%)

Query: 66  MTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKER 125
           MT     P   +FN+L   + K           + ++  G+ P+ +T + L+N       
Sbjct: 1   MTSFIIMPDAVTFNILVDTLCKKGKISEAQGIVKTMIEKGVEPNTVTYSSLMN------- 53

Query: 126 GLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYEN 185
           G  ++NR+ EA  +F  MI  G  PDV++Y  LING C+   +  A ++  +M       
Sbjct: 54  GYLLQNRVFEARKVFNAMITRGCIPDVLSYNILINGCCKAQRIDEAKQIFDEMSF----R 109

Query: 186 GLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWE 245
           GLI   N  +Y+ ++    K+ +     +LF +M  +G +P +V  +  +HG    G  +
Sbjct: 110 GLIP--NTATYNTLLGGFWKQKI-----QLFKDMHAQGCSPDLVTYSIFLHGLSKQGYLD 162

Query: 246 EVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLM 305
           +   LF EM +    P+L+ +N++ID +CK GK+ +A  L   +  +GL PD  ++ S++
Sbjct: 163 QALELFREMQNNYLNPDLVIYNILIDAMCKSGKLEDARELFLKLHVKGLLPDVRSWTSII 222

Query: 306 DGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVR 365
            G C  G +D A + F  M   GC     SYN+++ G+ +      A  L++++   G  
Sbjct: 223 SGLCREGLLDEAYKAFRQMERDGCPPDCCSYNVIVRGFLQNNGASRAEQLFQEMFDRGFS 282

Query: 366 QTVIT 370
              +T
Sbjct: 283 ADALT 287



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 72/243 (29%), Positives = 118/243 (48%), Gaps = 18/243 (7%)

Query: 58  EARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILI 117
           EAR  F  M      P + S+N+L     K +  D     + ++   GL+P+  T N L+
Sbjct: 63  EARKVFNAMITRGCIPDVLSYNILINGCCKAQRIDEAKQIFDEMSFRGLIPNTATYNTLL 122

Query: 118 NCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKK 177
             F             K+   LFK+M A G  PD++TY   ++G  + G L  AL L ++
Sbjct: 123 GGF------------WKQKIQLFKDMHAQGCSPDLVTYSIFLHGLSKQGYLDQALELFRE 170

Query: 178 MVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHG 237
           M   +Y N      ++  Y+I+ID++CK G ++ A+ELFL++  +G+ P V   T++I G
Sbjct: 171 M-QNNYLN-----PDLVIYNILIDAMCKSGKLEDARELFLKLHVKGLLPDVRSWTSIISG 224

Query: 238 FCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPD 297
            C  G  +E    F +M   G  P+  ++NV++    +    + A  L + M  RG + D
Sbjct: 225 LCREGLLDEAYKAFRQMERDGCPPDCCSYNVIVRGFLQNNGASRAEQLFQEMFDRGFSAD 284

Query: 298 RFT 300
             T
Sbjct: 285 ALT 287



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 55/205 (26%), Positives = 96/205 (46%), Gaps = 42/205 (20%)

Query: 394 MKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLF---------------------HMLEMN 432
           M  + + PD  T+NIL+D LCK   + EA  +                      ++L+  
Sbjct: 1   MTSFIIMPDAVTFNILVDTLCKKGKISEAQGIVKTMIEKGVEPNTVTYSSLMNGYLLQNR 60

Query: 433 KFE----FGIEI----------FNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSI 478
            FE    F   I          +N LI+G CKA R+D A ++F ++  +GL+P   TY+ 
Sbjct: 61  VFEARKVFNAMITRGCIPDVLSYNILINGCCKAQRIDEAKQIFDEMSFRGLIPNTATYNT 120

Query: 479 MIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPE 538
           ++ G  ++ K++   D    M   GC+P++VT++  +HG  +     + +EL  +M    
Sbjct: 121 LLGGFWKQ-KIQLFKD----MHAQGCSPDLVTYSIFLHGLSKQGYLDQALELFREMQNNY 175

Query: 539 RNLVPDDTTFSIVVDLLAKDEKYHE 563
            N  PD   ++I++D + K  K  +
Sbjct: 176 LN--PDLVIYNILIDAMCKSGKLED 198



 Score = 58.9 bits (141), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 50/191 (26%), Positives = 82/191 (42%), Gaps = 15/191 (7%)

Query: 7   FRCLFSSETVSKVKLSSLFKSPRQI-----AAVSSPE-TQLNEFLHENCKSGIINLNEAR 60
           FR L  +       L   +K   Q+     A   SP+    + FLH   K G   L++A 
Sbjct: 108 FRGLIPNTATYNTLLGGFWKQKIQLFKDMHAQGCSPDLVTYSIFLHGLSKQGY--LDQAL 165

Query: 61  YFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCF 120
             F  M +   +P +  +N+L  A+ K+   +     + KL   GLLPD  +   +I+  
Sbjct: 166 ELFREMQNNYLNPDLVIYNILIDAMCKSGKLEDARELFLKLHVKGLLPDVRSWTSIIS-- 223

Query: 121 GNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVS 180
                GLC E  + EA   F+ M   G  PD  +Y  ++ GF +    S A +L ++M  
Sbjct: 224 -----GLCREGLLDEAYKAFRQMERDGCPPDCCSYNVIVRGFLQNNGASRAEQLFQEMFD 278

Query: 181 GDYENGLISKT 191
             +    +++T
Sbjct: 279 RGFSADALTRT 289


>gi|296081998|emb|CBI21003.3| unnamed protein product [Vitis vinifera]
          Length = 837

 Score =  242 bits (618), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 149/519 (28%), Positives = 270/519 (52%), Gaps = 52/519 (10%)

Query: 70  QPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCV 129
           +P   + + +L+ G  A+  + D+ ++ + K+   GL P+ +T ++LI        G C 
Sbjct: 321 KPMNLVVATSLMKGYCAQG-NLDSALNLFNKITEDGLFPNKVTYSVLI-------EGCCN 372

Query: 130 ENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLIS 189
              I++A+ L+  M   G+ P V    +L+ G+ +      A +L  + V          
Sbjct: 373 SGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVD-------CG 425

Query: 190 KTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNG 249
             NIF+Y+I++  LCK G +D+A  L   M  +G+ P VV    +I G C  GN +  + 
Sbjct: 426 VANIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASS 485

Query: 250 LFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYC 309
           +F +ML    +PN++T++++ID   K G   +A  L + M+   + P  FT+N++++G C
Sbjct: 486 VFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLC 545

Query: 310 LVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVI 369
            VG++  AR+   +   +G   + ++YN +++G+ K  N++ A+++YR++   GV   V+
Sbjct: 546 KVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVV 605

Query: 370 TYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHML 429
           TY +L++G  ++ +   A K  DEM+   +E D++ Y+ LIDG CK   ++ A  LF  L
Sbjct: 606 TYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFEL 665

Query: 430 --------------------EMNKFEFGI---------------EIFNCLIDGLCKAGRL 454
                               ++N  E  +                 +  LIDGL K GRL
Sbjct: 666 LEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRL 725

Query: 455 DNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTL 514
             A +L+ ++  KG+VP ++T+ ++++GLC KG+LE A   L  M++    P+V+ +NTL
Sbjct: 726 VFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTL 785

Query: 515 MHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
           + G+ +     +   L  +M   +R LVPDD T+ I+++
Sbjct: 786 IAGYFREGNLKEAFTLHDEML--DRGLVPDDVTYDILIN 822



 Score =  218 bits (555), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 140/476 (29%), Positives = 240/476 (50%), Gaps = 16/476 (3%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           C SG  N+ +A   +  M      P + + N L     K   ++     + + V  G+  
Sbjct: 371 CNSG--NIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGV-A 427

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           +  T NI+++        LC   ++ EA  L  NM+  G+ P+V++Y  +I G CR GN+
Sbjct: 428 NIFTYNIMMSW-------LCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNM 480

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
            +A  +   M++ D       K N+ +YSI+ID   K+G  +KA +LF +M    I P  
Sbjct: 481 DMASSVFSDMLARDL------KPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTD 534

Query: 229 VVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLEL 288
               T+I+G C  G   E        L+ G  P+ +T+N ++D   K G I+ A  +   
Sbjct: 535 FTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYRE 594

Query: 289 MIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILN 348
           M + G++P+  TY SL++G+C   RID A +    M  KG +  V +Y+ LI+G+CK  +
Sbjct: 595 MCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRD 654

Query: 349 VEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNI 408
           +E A  L+ +++  G+    I YN+++SG         A   + +M    +  DL TY  
Sbjct: 655 MESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTT 714

Query: 409 LIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKG 468
           LIDGL K   +  A  L+  +        I  F+ L++GLC  G+L+NA ++  ++ +K 
Sbjct: 715 LIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKILEEMDRKN 774

Query: 469 LVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKT 524
           + P+V+ Y+ +I G  R+G L++A      M   G  P+ VT++ L++G  + +++
Sbjct: 775 MTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRGLVPDDVTYDILINGKFKGDRS 830



 Score =  179 bits (453), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 159/545 (29%), Positives = 242/545 (44%), Gaps = 31/545 (5%)

Query: 34  VSSPETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDA 93
           V+ P++ L  F     + G I   +A     ++    P     +  LL   V+ +     
Sbjct: 71  VNDPQSALRYFKRAETQRGFIRGVDAYCVLLHILMRSPETHGHARKLLNRYVSGDSDPSP 130

Query: 94  VISFYRKLVSIGLLPDF----LTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVR 149
           V+ F   L++     DF       N L+N +          NRI+ A   F  MI   V 
Sbjct: 131 VV-FVDHLINCAKRFDFELDHRVFNYLLNAY-------IRANRIENAIDCFNAMICQDVI 182

Query: 150 PDVITYGTLINGFCRTGNLSVALRLHKKMV----SGDYENGLISKTNIFSYSIIIDSLCK 205
           P V     L+    R   +     L+ KMV     GD+          F+  +++ +  K
Sbjct: 183 PWVPYMNILLTALVRRNMIGELRDLYNKMVLRGIYGDH----------FTVHVMVRACLK 232

Query: 206 EGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLT 265
           EG V++A+E F E K RG+       + +I   C   N      L  EM + G  P+  T
Sbjct: 233 EGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNSNLGLELLEEMKERGWVPSEAT 292

Query: 266 F-NVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSM 324
           F +V++ C+ +G  + EA  L E MI  G   +     SLM GYC  G +D+A  +F  +
Sbjct: 293 FTSVIVACVAQGNMV-EALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKI 351

Query: 325 HSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQA 384
              G     V+Y++LI G C   N+E+A  LY Q+  NG+  +V   N+LL G  +A   
Sbjct: 352 TEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLW 411

Query: 385 GYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCL 444
             A KLFDE     V  ++ TYNI++  LCK   + EA  L   +        +  +N +
Sbjct: 412 EEASKLFDEAVDCGV-ANIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDM 470

Query: 445 IDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGC 504
           I G C+ G +D A  +F  +  + L P VVTYSI+I G  +KG  EKA D    M     
Sbjct: 471 ILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNI 530

Query: 505 APNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHEC 564
           AP   TFNT+++G  +  + S+  + L      E   +P   T++ +VD   K+      
Sbjct: 531 APTDFTFNTIINGLCKVGQMSEARDKLKNFL--EEGFIPSCMTYNSIVDGFIKEGNIDSA 588

Query: 565 SAVSK 569
            AV +
Sbjct: 589 LAVYR 593


>gi|302818229|ref|XP_002990788.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
 gi|300141349|gb|EFJ08061.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
          Length = 624

 Score =  242 bits (618), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 150/517 (29%), Positives = 245/517 (47%), Gaps = 45/517 (8%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           C+S    L +AR   G M  M   P  + +N L    +K + +     F  ++V    LP
Sbjct: 21  CRSN--QLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLP 78

Query: 109 DFLTLNILIN--CFGNKER--------------------------GLCVENRIKEATWLF 140
             +T   +++  C   + +                          GLC E ++ EA  + 
Sbjct: 79  TVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKML 138

Query: 141 KNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKM-VSGDYENGLISKTNIFSYSII 199
           + M   G  PDV+TY + I G C+   +  A +   +M V+ D          + SY+ +
Sbjct: 139 EEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARMPVTPD----------VVSYTTV 188

Query: 200 IDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGP 259
           I+ LCK G +D A  +  +M  RG  P VV  ++LI GFC  G  E   GL   ML LG 
Sbjct: 189 INGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGC 248

Query: 260 RPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTARE 319
           RPN++ +N ++  L + G I +A  +L  M +RG  PD  +YN+ +DG C   R+  A+ 
Sbjct: 249 RPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKA 308

Query: 320 IFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLF 379
           +F  M  +GC     SY++L+   CK   +++A++L  Q         ++ Y  LL GL 
Sbjct: 309 VFDRMVERGCTPNASSYSMLVEELCKKKELDDAITLVEQAREKYQIVDILLYTVLLDGLC 368

Query: 380 QAGQAGYAQKLFDEMKLYNV-EPDLSTYNILIDGLCKNNCVQEAVKLF-HMLEMNKFEFG 437
           + G+   A  LF ++    + EPD+  YN+++D  CK   + +A+++   MLE N     
Sbjct: 369 KGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLERNC--CN 426

Query: 438 IEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLL 497
           +  +N L+ GLC   RL +A  +   +  +G +P  VTY  ++  +C+ GK   A +   
Sbjct: 427 VVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFE 486

Query: 498 YMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKM 534
              K GC P+VVT++ L+ G +  N   +   L  K+
Sbjct: 487 EAVKGGCVPDVVTYSALITGLVHENMAEEAYLLFTKL 523



 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 150/487 (30%), Positives = 239/487 (49%), Gaps = 57/487 (11%)

Query: 108 PDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGN 167
           PD  T  IL+       RGLC  N++++A  L   M   G  PD   Y  LI+G+ +  +
Sbjct: 8   PDAFTFAILL-------RGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKD 60

Query: 168 LSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPA 227
              A +   +MV    +N  +    + +Y+ I+D LCK G    A +L  EM+ +G +P 
Sbjct: 61  FGQAFKFLAEMV----KNHCLP--TVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPN 114

Query: 228 VVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLE 287
           +     ++ G C     +E   +  EM   G  P+++T+N  I  LCK  +++EA   L 
Sbjct: 115 IYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLA 174

Query: 288 LMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKIL 347
            M    + PD  +Y ++++G C  G +D+A  +   M ++GC   VV+Y+ LI+G+CK  
Sbjct: 175 RM---PVTPDVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGG 231

Query: 348 NVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYN 407
            VE AM L   ++  G R  ++ YN+LL  L + G  G A+ +  EM+     PD+ +YN
Sbjct: 232 EVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYN 291

Query: 408 ILIDGLCKNNCVQEAVKLF-HMLE---------------------------------MNK 433
             IDGLCK   V++A  +F  M+E                                   K
Sbjct: 292 ACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLVEELCKKKELDDAITLVEQAREK 351

Query: 434 FEF-GIEIFNCLIDGLCKAGRLDNAWELFHK-LPQKGLVPTVVTYSIMIHGLCRKGKLEK 491
           ++   I ++  L+DGLCK GR D A  LF K L +K   P V  Y++M+   C++ +++K
Sbjct: 352 YQIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDK 411

Query: 492 ANDFLLYM-EKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSI 550
           A      M E+N C  NVVT+N L+HG   +++ S    +L  M   +   +PD  T+  
Sbjct: 412 ALQIHKQMLERNCC--NVVTWNILVHGLCVDDRLSDAETMLLTMV--DEGFIPDFVTYGT 467

Query: 551 VVDLLAK 557
           +VD + K
Sbjct: 468 LVDAMCK 474



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 145/554 (26%), Positives = 248/554 (44%), Gaps = 86/554 (15%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CK+G     +A      M     SP I ++N++   + + R  D       ++   G  P
Sbjct: 91  CKAG--RTKDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFP 148

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           D +T N  I       +GLC  +R+ EA      M    V PDV++Y T+ING C++G+L
Sbjct: 149 DVVTYNSFI-------KGLCKCDRVDEARKFLARM---PVTPDVVSYTTVINGLCKSGDL 198

Query: 169 SVALRLHKKMVS--------------------GDYEN--GLIS-------KTNIFSYSII 199
             A R+  +M +                    G+ E   GL+        + N+ +Y+ +
Sbjct: 199 DSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSL 258

Query: 200 IDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGP 259
           + +L + G + KA+++ +EM+ RG  P VV     I G C A   ++   +F  M++ G 
Sbjct: 259 LGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGC 318

Query: 260 RPN-----------------------------------LLTFNVMIDCLCKGGKINEANG 284
            PN                                   +L + V++D LCKGG+ +EA  
Sbjct: 319 TPNASSYSMLVEELCKKKELDDAITLVEQAREKYQIVDILLYTVLLDGLCKGGRFDEACA 378

Query: 285 LL-ELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGY 343
           L  +++ ++   PD F YN ++D +C   +ID A +I   M  + C + VV++NIL++G 
Sbjct: 379 LFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLERNCCN-VVTWNILVHGL 437

Query: 344 CKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDL 403
           C    + +A ++   ++  G     +TY TL+  + + G++  A +LF+E       PD+
Sbjct: 438 CVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDV 497

Query: 404 STYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHK 463
            TY+ LI GL   N  +EA  LF  L+       + ++N +I G  + G  D   +LF +
Sbjct: 498 VTYSALITGLVHENMAEEAYLLFTKLD-------VALWNAMILGYAENGSGDLGLKLFVE 550

Query: 464 LPQKGLVPTVVTYSIMIHG-LCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNN 522
           L +  + P   T+   I G L +   L KA        K G  P++   NTL+  F +  
Sbjct: 551 LIESDVEPNARTFGKEISGKLVKAESLGKARGLFDRAVKGGFFPDLFVANTLIDVFAKCG 610

Query: 523 KTSKVVELLHKMAE 536
              +   + + M +
Sbjct: 611 DLEEARRIFYSMKQ 624



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 105/381 (27%), Positives = 200/381 (52%), Gaps = 6/381 (1%)

Query: 190 KTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNG 249
           + + F+++I++  LC+   ++KA++L   MK  G  P   +   LI G+  A ++ +   
Sbjct: 7   QPDAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFK 66

Query: 250 LFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYC 309
              EM+     P ++T+  ++D LCK G+  +A  LL+ M  +G +P+ +TYN +++G C
Sbjct: 67  FLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNVIVEGLC 126

Query: 310 LVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVI 369
              ++D A+++   M  +G    VV+YN  I G CK   V+EA     ++    V   V+
Sbjct: 127 EERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARM---PVTPDVV 183

Query: 370 TYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHML 429
           +Y T+++GL ++G    A ++ D+M      PD+ TY+ LIDG CK   V+ A+ L   +
Sbjct: 184 SYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSM 243

Query: 430 EMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKL 489
                   +  +N L+  L + G +  A ++  ++ ++G  P VV+Y+  I GLC+  ++
Sbjct: 244 LKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERV 303

Query: 490 EKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFS 549
           +KA      M + GC PN  +++ L+    +  +    + L+ +  E  +  + D   ++
Sbjct: 304 KKAKAVFDRMVERGCTPNASSYSMLVEELCKKKELDDAITLVEQAREKYQ--IVDILLYT 361

Query: 550 IVVDLLAKDEKYHE-CSAVSK 569
           +++D L K  ++ E C+  SK
Sbjct: 362 VLLDGLCKGGRFDEACALFSK 382



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 99/314 (31%), Positives = 164/314 (52%), Gaps = 5/314 (1%)

Query: 254 MLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGR 313
           M+D   +P+  TF +++  LC+  ++ +A  LL  M + G  PD   YN+L+ GY     
Sbjct: 1   MIDKSCQPDAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKD 60

Query: 314 IDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNT 373
              A +    M    C  TVV+Y  +++G CK    ++A+ L  ++   G    + TYN 
Sbjct: 61  FGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNV 120

Query: 374 LLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNK 433
           ++ GL +  +   A+K+ +EM +    PD+ TYN  I GLCK + V EA K    + +  
Sbjct: 121 IVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARMPVTP 180

Query: 434 FEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKAN 493
               +  +  +I+GLCK+G LD+A  +  ++  +G  P VVTYS +I G C+ G++E+A 
Sbjct: 181 ---DVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAM 237

Query: 494 DFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
             L  M K GC PN+V +N+L+    +     K  ++L +M    R   PD  +++  +D
Sbjct: 238 GLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEM--ERRGFTPDVVSYNACID 295

Query: 554 LLAKDEKYHECSAV 567
            L K E+  +  AV
Sbjct: 296 GLCKAERVKKAKAV 309



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 92/345 (26%), Positives = 167/345 (48%), Gaps = 5/345 (1%)

Query: 219 MKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGK 278
           M  +   P       L+ G C +   E+   L   M ++G  P+   +N +I    K   
Sbjct: 1   MIDKSCQPDAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKD 60

Query: 279 INEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNI 338
             +A   L  M++    P   TY +++DG C  GR   A ++   M  KGC   + +YN+
Sbjct: 61  FGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNV 120

Query: 339 LINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYN 398
           ++ G C+   ++EA  +  ++   G    V+TYN+ + GL +  +   A+K    M    
Sbjct: 121 IVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARMP--- 177

Query: 399 VEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAW 458
           V PD+ +Y  +I+GLCK+  +  A ++   +        +  ++ LIDG CK G ++ A 
Sbjct: 178 VTPDVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAM 237

Query: 459 ELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGF 518
            L   + + G  P +V Y+ ++  L R G + KA D L+ ME+ G  P+VV++N  + G 
Sbjct: 238 GLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGL 297

Query: 519 LQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
            +  +  K   +  +M   ER   P+ +++S++V+ L K ++  +
Sbjct: 298 CKAERVKKAKAVFDRMV--ERGCTPNASSYSMLVEELCKKKELDD 340


>gi|147857775|emb|CAN80799.1| hypothetical protein VITISV_019809 [Vitis vinifera]
          Length = 1099

 Score =  242 bits (618), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 150/467 (32%), Positives = 237/467 (50%), Gaps = 23/467 (4%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
           P +  +N +  +++K    D + + Y +L++  + P+  T N ++N       G C    
Sbjct: 157 PTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQISPNIYTFNAMVN-------GYCKIGN 209

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLI---- 188
           + EA      ++  G+ PD  TY +LI G CR            K V   YE  LI    
Sbjct: 210 VVEAELYASKIVQAGLHPDTFTYTSLILGHCRN-----------KGVDNAYEVFLIMPQK 258

Query: 189 -SKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEV 247
             + N  SY+ +I  LC+ G +++A +LF +M      P V   T LI+    +G   E 
Sbjct: 259 GCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEA 318

Query: 248 NGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDG 307
             LF EM + G  PN+ T+ V+ID LCK  K++EA  +L  M ++GL P   TYN+L+DG
Sbjct: 319 LNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDG 378

Query: 308 YCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQT 367
           YC  G ID A EI   M S  C     +YN LI G CK   V +AM+L  +++   +  +
Sbjct: 379 YCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPS 438

Query: 368 VITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFH 427
           +ITYN+L+ G  +      A +L   M    + PD  TY++ ID LCK   V+EA  LF 
Sbjct: 439 LITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFD 498

Query: 428 MLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKG 487
            ++    +    I+  LIDG CK G++D A+ L  ++     +P   TY+++I GLC++ 
Sbjct: 499 SVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEK 558

Query: 488 KLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKM 534
           K+++A+  +  M   G  P VVT+  L+   L++      +++ + M
Sbjct: 559 KMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHM 605



 Score =  219 bits (557), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 153/518 (29%), Positives = 247/518 (47%), Gaps = 42/518 (8%)

Query: 51  SGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDF 110
           S  + ++E +  +  + + Q SP I +FN +     K  +      +  K+V  GL PD 
Sbjct: 170 SKFLLIDEMKTVYLELLNNQISPNIYTFNAMVNGYCKIGNVVEAELYASKIVQAGLHPDT 229

Query: 111 LTLNILI--NC--------------------------FGNKERGLCVENRIKEATWLFKN 142
            T   LI  +C                          + N   GLC   RI EA  LF +
Sbjct: 230 FTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFAD 289

Query: 143 MIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDS 202
           M      P V TY  LI     +G    AL L  +M     E G   + N+ +Y+++ID 
Sbjct: 290 MTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEM----KEKG--CEPNVHTYTVLIDG 343

Query: 203 LCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPR-- 260
           LCKE  +D+A+++  EM  +G+ P+VV    LI G+C  G  ++      E+LDL     
Sbjct: 344 LCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDA----FEILDLMESNS 399

Query: 261 --PNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAR 318
             PN  T+N +I  LCK  K+++A  LL  M++R L+P   TYNSL+ G C V  +++A 
Sbjct: 400 CGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAY 459

Query: 319 EIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGL 378
            +   M+  G      +Y++ I+  CK   VEEA +L+  + + GV+   + Y  L+ G 
Sbjct: 460 RLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGY 519

Query: 379 FQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGI 438
            + G+   A  L + M      P+  TYN+LI+GLCK   ++EA  L   +     +  +
Sbjct: 520 CKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTV 579

Query: 439 EIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLY 498
             +  LI  + K G  D+A ++F+ +   G  P V TY+  +H    +G LE+ +D +  
Sbjct: 580 VTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAK 639

Query: 499 MEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAE 536
           M + G  P++VT+  L+ G+ +   T +  + L  M +
Sbjct: 640 MNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVD 677



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 142/436 (32%), Positives = 217/436 (49%), Gaps = 28/436 (6%)

Query: 140 FKNMIAF--GVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYS 197
           F N IA   G + +V +Y +++N   R   L VA ++   M                   
Sbjct: 87  FFNWIALRPGFKHNVHSYSSMLNILIRARLLGVAEKIRISM------------------- 127

Query: 198 IIIDSLCKEGLVDKAKELFLEMKGRG---INPAVVVCTTLIHGFCCAGNWEEVNGLFIEM 254
             I S C    V    E+F +M   G     P +    T++         +E+  +++E+
Sbjct: 128 --IKSCCSIEDVLFVLEVFRKMNADGEFKFKPTLRCYNTILMSLSKFLLIDEMKTVYLEL 185

Query: 255 LDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRI 314
           L+    PN+ TFN M++  CK G + EA      ++Q GL+PD FTY SL+ G+C    +
Sbjct: 186 LNNQISPNIYTFNAMVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGV 245

Query: 315 DTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTL 374
           D A E+FL M  KGC+   VSY  LI+G C+   + EA+ L+  +  +    TV TY  L
Sbjct: 246 DNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVL 305

Query: 375 LSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKF 434
           +  L  +G+   A  LF+EMK    EP++ TY +LIDGLCK N + EA K+   +     
Sbjct: 306 IYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGL 365

Query: 435 EFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKAND 494
              +  +N LIDG CK G +D+A+E+   +      P   TY+ +I GLC+K K+ KA  
Sbjct: 366 IPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMA 425

Query: 495 FLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDL 554
            L  M +   +P+++T+N+L+HG  + N       LL  M   E  LVPD  T+S+ +D 
Sbjct: 426 LLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMN--ENGLVPDQWTYSVFIDT 483

Query: 555 LAKDEKYHECSAVSKS 570
           L K+ +  E   +  S
Sbjct: 484 LCKEGRVEEAGTLFDS 499



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 135/450 (30%), Positives = 220/450 (48%), Gaps = 16/450 (3%)

Query: 75  ISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIK 134
           +S  NL+ G     R  +A +  +  +      P   T  +LI       R +       
Sbjct: 265 VSYTNLIHGLCEAGRINEA-LKLFADMTEDNCCPTVRTYTVLIYALSGSGRKV------- 316

Query: 135 EATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIF 194
           EA  LF  M   G  P+V TY  LI+G C+   +  A    +KM+S   E GLI   ++ 
Sbjct: 317 EALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEA----RKMLSEMSEKGLIP--SVV 370

Query: 195 SYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEM 254
           +Y+ +ID  CKEG++D A E+   M+     P       LI G C      +   L  +M
Sbjct: 371 TYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKM 430

Query: 255 LDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRI 314
           L+    P+L+T+N +I   CK   +  A  LL LM + GL PD++TY+  +D  C  GR+
Sbjct: 431 LERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRV 490

Query: 315 DTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTL 374
           + A  +F S+ +KG K   V Y  LI+GYCK+  ++ A SL  +++++       TYN L
Sbjct: 491 EEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVL 550

Query: 375 LSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLF-HMLEMNK 433
           + GL +  +   A  L  +M    V+P + TY ILI  + K+     A+K+F HM+ +  
Sbjct: 551 IEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLG- 609

Query: 434 FEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKAN 493
           ++  +  +   +      G L+   ++  K+ ++G++P +VTY+++I G  R G   +A 
Sbjct: 610 YQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAF 669

Query: 494 DFLLYMEKNGCAPNVVTFNTLMHGFLQNNK 523
           DFL  M   GC P++   + L+      N+
Sbjct: 670 DFLKCMVDTGCKPSLYIVSILIKNLSHENR 699



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 147/539 (27%), Positives = 240/539 (44%), Gaps = 44/539 (8%)

Query: 56  LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNI 115
           ++EAR     M+     P + ++N L     K    D        + S    P+  T N 
Sbjct: 350 MDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNE 409

Query: 116 LINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLH 175
           LI C      GLC + ++ +A  L   M+   + P +ITY +LI+G C+  +L  A RL 
Sbjct: 410 LI-C------GLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLL 462

Query: 176 KKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLI 235
             M     ENGL+   + ++YS+ ID+LCKEG V++A  LF  +K +G+    V+ T LI
Sbjct: 463 SLM----NENGLVP--DQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALI 516

Query: 236 HGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLN 295
            G+C  G  +    L   ML+    PN  T+NV+I+ LCK  K+ EA+ L+  M+  G+ 
Sbjct: 517 DGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVK 576

Query: 296 PDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSL 355
           P   TY  L+      G  D A ++F  M S G +  V +Y   ++ Y     +EE   +
Sbjct: 577 PTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDV 636

Query: 356 YRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCK 415
             ++   G+   ++TY  L+ G  + G    A      M     +P L   +ILI  L  
Sbjct: 637 IAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSH 696

Query: 416 NNCVQE-----------------------------AVKLFHMLEMNKFEFGIEIFNCLID 446
            N ++E                             A+KLF  +  +     + I+  LI 
Sbjct: 697 ENRMKETRSEIGIDSVSNVNSVDIADVWKTLEYEIALKLFEKMVEHGCTIDVSIYGALIA 756

Query: 447 GLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAP 506
           G C+  RL+ A  L H + ++G+ P+   Y+ ++   C+ G   +A   +  M +NG  P
Sbjct: 757 GFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLP 816

Query: 507 NVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECS 565
            + ++  L+ G        K   + H +     N   D+  + +++D L K +   ECS
Sbjct: 817 LLESYKLLVCGLYIEGSNEKAKAVFHGLLSCGYNY--DEVAWKVLIDGLLKRDLVDECS 873



 Score =  105 bits (262), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 87/323 (26%), Positives = 141/323 (43%), Gaps = 30/323 (9%)

Query: 56  LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNI 115
           + EA      M  M   P + ++ +L G + K+  +D  +  +  +VS+G  PD  T   
Sbjct: 560 MKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTA 619

Query: 116 LINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLH 175
            ++ + +       +  ++E   +   M   G+ PD++TY  LI+G+ R G    A    
Sbjct: 620 FLHAYFS-------QGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFL 672

Query: 176 KKMVSGDYENGL---------ISKTNIFSYS---IIIDSLCKEGLVDKAK---------- 213
           K MV    +  L         +S  N    +   I IDS+     VD A           
Sbjct: 673 KCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNVNSVDIADVWKTLEYEIA 732

Query: 214 -ELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDC 272
            +LF +M   G    V +   LI GFC     EE  GL   M + G  P+   +N ++DC
Sbjct: 733 LKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDC 792

Query: 273 LCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHT 332
            CK G   EA  L++ M++ GL P   +Y  L+ G  + G  + A+ +F  + S G  + 
Sbjct: 793 CCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVFHGLLSCGYNYD 852

Query: 333 VVSYNILINGYCKILNVEEAMSL 355
            V++ +LI+G  K   V+E   L
Sbjct: 853 EVAWKVLIDGLLKRDLVDECSEL 875


>gi|359473479|ref|XP_002267299.2| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g13630-like [Vitis
           vinifera]
          Length = 829

 Score =  242 bits (618), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 141/446 (31%), Positives = 239/446 (53%), Gaps = 13/446 (2%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
           P + SFN L     K    D   SF+  ++  GLLPD  + NIL++       GLCV   
Sbjct: 268 PSVVSFNALMSGFCKMGSVDVAKSFFCMMIKYGLLPDVYSYNILLH-------GLCVAGS 320

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
           ++EA     +M   GV PD++TY  L NGF   G +S A ++ ++M+     NGL    +
Sbjct: 321 MEEALEFTNDMENHGVEPDIVTYNILANGFRILGLISGAWKVVQRMLL----NGL--NPD 374

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
           + +Y+I+I   C+ G ++++ +L  +M  +G+  ++V  T L+   C +G  +E   L  
Sbjct: 375 LVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLH 434

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
           EM  +G +P+LLT++V+I  LCK G + EA  L E M  + + P+ F  ++++ G    G
Sbjct: 435 EMEVIGLKPDLLTYSVLIHGLCKRGAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKG 494

Query: 313 RIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYN 372
            I  A+  F S+        ++ YNI+I+GY K+ N+ EA+  Y+QII  G+  T++T+N
Sbjct: 495 AISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFN 554

Query: 373 TLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMN 432
           +L+ G  + G+   A KL D +K++ + P   TY  L++G C+   +     + H +E  
Sbjct: 555 SLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAK 614

Query: 433 KFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKA 492
             +     +  ++ GLCK GRL  + +L   +  +GL P  +TY+ +I   C+   L+KA
Sbjct: 615 AIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKA 674

Query: 493 NDFLLYMEKNGCAPNVVTFNTLMHGF 518
                 M ++   P+ VT+N L++G 
Sbjct: 675 FQLHNQMLQHSLQPSPVTYNVLINGL 700



 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 146/537 (27%), Positives = 269/537 (50%), Gaps = 61/537 (11%)

Query: 56  LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNI 115
           +++A +    M  +     I+++N L   +   RH D +   Y ++ + G+  +  T  I
Sbjct: 184 VHDALFVLAKMKVLNLQVSIATYNSLLYNL---RHTDIMWDVYNEIKASGVPQNEYTNPI 240

Query: 116 LINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLH 175
           LI+       GLC ++R+++A    +        P V+++  L++GFC+ G++ VA    
Sbjct: 241 LID-------GLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALMSGFCKMGSVDVAKSFF 293

Query: 176 KKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLI 235
             M+    + GL+   +++SY+I++  LC  G +++A E   +M+  G+ P +V    L 
Sbjct: 294 CMMI----KYGLLP--DVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNILA 347

Query: 236 HGF----CCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQ 291
           +GF      +G W+ V      ML  G  P+L+T+ ++I   C+ G I E+  L E M+ 
Sbjct: 348 NGFRILGLISGAWKVVQ----RMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLS 403

Query: 292 RGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEE 351
           +GL     TY  L+   C  GRID A  +   M   G K  +++Y++LI+G CK   VEE
Sbjct: 404 QGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSVLIHGLCKRGAVEE 463

Query: 352 AMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFD---------EMKLYNV--- 399
           A+ LY ++ S  +       + ++SGLF+ G    AQ  FD         E+ LYN+   
Sbjct: 464 AIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMID 523

Query: 400 -----------------------EPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEF 436
                                   P + T+N LI G CK   + EAVKL   ++++    
Sbjct: 524 GYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVP 583

Query: 437 GIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFL 496
               +  L++G C+ G + + +++ H++  K + PT +TY++++ GLC++G+L ++   L
Sbjct: 584 TSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLL 643

Query: 497 LYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
            YM   G  P+ +T+NT++  F + +   K  +L ++M   + +L P   T++++++
Sbjct: 644 KYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQML--QHSLQPSPVTYNVLIN 698



 Score =  221 bits (564), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 128/421 (30%), Positives = 220/421 (52%), Gaps = 37/421 (8%)

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
           N ++  I+ID LC++  +  A     E  G    P+VV    L+ GFC  G+ +     F
Sbjct: 234 NEYTNPILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALMSGFCKMGSVDVAKSFF 293

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
             M+  G  P++ ++N+++  LC  G + EA      M   G+ PD  TYN L +G+ ++
Sbjct: 294 CMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNILANGFRIL 353

Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
           G I  A ++   M   G    +V+Y ILI G+C++ N+EE+  L  +++S G++ +++TY
Sbjct: 354 GLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTY 413

Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
             LLS L ++G+   A  L  EM++  ++PDL TY++LI GLCK   V+EA++L+  +  
Sbjct: 414 TVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSVLIHGLCKRGAVEEAIELYEEMCS 473

Query: 432 NK---------------FEFG--------------------IEIFNCLIDGLCKAGRLDN 456
            +               FE G                    I ++N +IDG  K G +  
Sbjct: 474 KRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGE 533

Query: 457 AWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMH 516
           A   + ++ +KG+ PT+VT++ +I+G C+KGKL +A   L  ++ +G  P  VT+ TLM+
Sbjct: 534 AVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMN 593

Query: 517 GFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKSSYRACL 576
           G+ +      + ++LH+M    + + P   T+++VV  L K+ + HE   + K  Y   L
Sbjct: 594 GYCEEGDMHSMFDMLHEM--EAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGL 651

Query: 577 Y 577
           +
Sbjct: 652 F 652



 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 142/558 (25%), Positives = 256/558 (45%), Gaps = 73/558 (13%)

Query: 41  LNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRK 100
            N  +   CK G +++  A+ FF  M      P + S+N+L   +      +  + F   
Sbjct: 273 FNALMSGFCKMGSVDV--AKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTND 330

Query: 101 LVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLIN 160
           + + G+ PD +T NIL N       G  +   I  A  + + M+  G+ PD++TY  LI 
Sbjct: 331 MENHGVEPDIVTYNILAN-------GFRILGLISGAWKVVQRMLLNGLNPDLVTYTILIC 383

Query: 161 GFCRTGNLSVALRLHKKMVSGDYENGLIS-----------------------------KT 191
           G C+ GN+  + +L +KM+S   +  +++                             K 
Sbjct: 384 GHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKP 443

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTT------------------ 233
           ++ +YS++I  LCK G V++A EL+ EM  + I P   VC+                   
Sbjct: 444 DLLTYSVLIHGLCKRGAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYF 503

Query: 234 -----------------LIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKG 276
                            +I G+   GN  E    + ++++ G  P ++TFN +I   CK 
Sbjct: 504 DSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKK 563

Query: 277 GKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSY 336
           GK+ EA  LL+ +   GL P   TY +LM+GYC  G + +  ++   M +K  K T ++Y
Sbjct: 564 GKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITY 623

Query: 337 NILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKL 396
            +++ G CK   + E++ L + + + G+    ITYNT++    +A     A +L ++M  
Sbjct: 624 TVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQ 683

Query: 397 YNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDN 456
           ++++P   TYN+LI+GLC    +++A +L   L+          +  +I   C  G + N
Sbjct: 684 HSLQPSPVTYNVLINGLCVYGNLKDADRLLVTLQDQSIRLTKVAYTTIIKAHCAKGDVQN 743

Query: 457 AWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMH 516
           A   FH++ ++G   ++  YS +I+ LC++  +  A  F   M  +G  P+      +++
Sbjct: 744 ALVFFHQMVERGFEVSIRDYSAVINRLCKRNLITDAKFFFCMMLTHGIPPDQDICLVMLN 803

Query: 517 GFLQNNKTSKVVELLHKM 534
            F ++   + V E+   M
Sbjct: 804 AFHRSGDPNSVFEIFAMM 821



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 70/221 (31%), Positives = 119/221 (53%), Gaps = 9/221 (4%)

Query: 334 VSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDE 393
           V +++L   Y +   V +A+ +  ++    ++ ++ TYN+LL  L           +++E
Sbjct: 169 VVWDMLACAYSRAEMVHDALFVLAKMKVLNLQVSIATYNSLLYNL---RHTDIMWDVYNE 225

Query: 394 MKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEI--FNCLIDGLCKA 451
           +K   V  +  T  ILIDGLC+ + +Q+AV      E    EFG  +  FN L+ G CK 
Sbjct: 226 IKASGVPQNEYTNPILIDGLCRQSRLQDAVTFLR--ETGGEEFGPSVVSFNALMSGFCKM 283

Query: 452 GRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTF 511
           G +D A   F  + + GL+P V +Y+I++HGLC  G +E+A +F   ME +G  P++VT+
Sbjct: 284 GSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTY 343

Query: 512 NTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVV 552
           N L +GF      S   +++ +M     N  PD  T++I++
Sbjct: 344 NILANGFRILGLISGAWKVVQRMLLNGLN--PDLVTYTILI 382


>gi|255581786|ref|XP_002531694.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223528670|gb|EEF30685.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 821

 Score =  242 bits (618), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 145/484 (29%), Positives = 240/484 (49%), Gaps = 15/484 (3%)

Query: 77  SFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEA 136
           SFN L   + K     +  + Y ++ S G+ P  LT N +IN        LC + +++EA
Sbjct: 164 SFNTLLLQLGKFDMVTSAQNVYAQIFSSGVKPSLLTFNTMINI-------LCKKGKVQEA 216

Query: 137 TWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSY 196
             +F  +  F + PD  TY +LI G CR   L  A  +  +MV            N  +Y
Sbjct: 217 VLVFNKIFQFDLCPDAFTYTSLILGHCRNRKLDKAFEVFDRMVKDG------CNPNSVTY 270

Query: 197 SIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLD 256
           S +I+ LC EG + +A ++  EM  +GI P V   T  I   C  G  ++   L   M  
Sbjct: 271 STLINGLCNEGRIGEAMDMLEEMTEKGIEPTVYTYTVPISSLCDIGRVDDAINLVRSMGK 330

Query: 257 LGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDT 316
            G  P++ T+  +I  L + GK+  A G+   M++ GL P+  TYN+L++  C  GR   
Sbjct: 331 KGCSPSVQTYTAIISGLFRAGKMELAIGMYHKMLKEGLVPNTVTYNALINELCTEGRFGI 390

Query: 317 AREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLS 376
           A +IF  M   G      +YN +I G   + ++E+AM ++ +++ +G   TV+TYNTL+ 
Sbjct: 391 ALKIFDWMEGHGTLANAQTYNQIIKGLFGMDDIEKAMVVFNKMLKDGPSPTVVTYNTLIV 450

Query: 377 GLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEF 436
              + G    A +    MK  N EPD  TY  LI G CK   +  A   F+ +       
Sbjct: 451 ENLKRGYLNNATRFLYMMKESNCEPDERTYCELISGFCKGGKLDSATSFFYEMLKCGISP 510

Query: 437 GIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFL 496
               +  +IDG CK G++D A  LF ++ + G   ++ TY+ +I GL +  +  +A  F 
Sbjct: 511 NQWTYTAMIDGYCKEGKIDVALSLFERMEENGCSASIETYNAIISGLSKGNRFSEAEKFC 570

Query: 497 LYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLA 556
             M + G  PN +T+ +L++G  +N  T+   ++ H+M   ++N +P+  T++ ++  L 
Sbjct: 571 AKMTEQGLQPNTITYTSLINGLCKNTATNLAFKIFHEME--KKNCLPNAHTYTSLIYGLC 628

Query: 557 KDEK 560
           ++ K
Sbjct: 629 QEGK 632



 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 147/515 (28%), Positives = 247/515 (47%), Gaps = 40/515 (7%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CK G   + EA   F  +      P   ++  L     +NR  D     + ++V  G  P
Sbjct: 208 CKKG--KVQEAVLVFNKIFQFDLCPDAFTYTSLILGHCRNRKLDKAFEVFDRMVKDGCNP 265

Query: 109 DFLTLNILINCFGNKER----------------------------GLCVENRIKEATWLF 140
           + +T + LIN   N+ R                             LC   R+ +A  L 
Sbjct: 266 NSVTYSTLINGLCNEGRIGEAMDMLEEMTEKGIEPTVYTYTVPISSLCDIGRVDDAINLV 325

Query: 141 KNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIII 200
           ++M   G  P V TY  +I+G  R G + +A+ ++ KM+    + GL+   N  +Y+ +I
Sbjct: 326 RSMGKKGCSPSVQTYTAIISGLFRAGKMELAIGMYHKML----KEGLVP--NTVTYNALI 379

Query: 201 DSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPR 260
           + LC EG    A ++F  M+G G          +I G     + E+   +F +ML  GP 
Sbjct: 380 NELCTEGRFGIALKIFDWMEGHGTLANAQTYNQIIKGLFGMDDIEKAMVVFNKMLKDGPS 439

Query: 261 PNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREI 320
           P ++T+N +I    K G +N A   L +M +    PD  TY  L+ G+C  G++D+A   
Sbjct: 440 PTVVTYNTLIVENLKRGYLNNATRFLYMMKESNCEPDERTYCELISGFCKGGKLDSATSF 499

Query: 321 FLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQ 380
           F  M   G      +Y  +I+GYCK   ++ A+SL+ ++  NG   ++ TYN ++SGL +
Sbjct: 500 FYEMLKCGISPNQWTYTAMIDGYCKEGKIDVALSLFERMEENGCSASIETYNAIISGLSK 559

Query: 381 AGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEI 440
             +   A+K   +M    ++P+  TY  LI+GLCKN     A K+FH +E          
Sbjct: 560 GNRFSEAEKFCAKMTEQGLQPNTITYTSLINGLCKNTATNLAFKIFHEMEKKNCLPNAHT 619

Query: 441 FNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYME 500
           +  LI GLC+ G++D A     +L + G  PT+ TYS ++ GLCR+G+  +A+  +  M+
Sbjct: 620 YTSLIYGLCQEGKVDAA----ERLTENGCEPTIDTYSTLVSGLCREGRSNEASQLVENMK 675

Query: 501 KNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMA 535
           + G +P++  + +L+    ++ K    +E+ + MA
Sbjct: 676 EKGLSPSMEIYCSLLVAHCKSLKVDCALEIFNLMA 710



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 131/468 (27%), Positives = 219/468 (46%), Gaps = 38/468 (8%)

Query: 72  SPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILIN------------- 118
           SP + ++  +   + +    +  I  Y K++  GL+P+ +T N LIN             
Sbjct: 334 SPSVQTYTAIISGLFRAGKMELAIGMYHKMLKEGLVPNTVTYNALINELCTEGRFGIALK 393

Query: 119 ---------CFGNKE------RGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFC 163
                       N +      +GL   + I++A  +F  M+  G  P V+TY TLI    
Sbjct: 394 IFDWMEGHGTLANAQTYNQIIKGLFGMDDIEKAMVVFNKMLKDGPSPTVVTYNTLIVENL 453

Query: 164 RTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRG 223
           + G L+ A R    M   + E       +  +Y  +I   CK G +D A   F EM   G
Sbjct: 454 KRGYLNNATRFLYMMKESNCE------PDERTYCELISGFCKGGKLDSATSFFYEMLKCG 507

Query: 224 INPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEAN 283
           I+P     T +I G+C  G  +    LF  M + G   ++ T+N +I  L KG + +EA 
Sbjct: 508 ISPNQWTYTAMIDGYCKEGKIDVALSLFERMEENGCSASIETYNAIISGLSKGNRFSEAE 567

Query: 284 GLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGY 343
                M ++GL P+  TY SL++G C     + A +IF  M  K C     +Y  LI G 
Sbjct: 568 KFCAKMTEQGLQPNTITYTSLINGLCKNTATNLAFKIFHEMEKKNCLPNAHTYTSLIYGL 627

Query: 344 CKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDL 403
           C+   V+ A     ++  NG   T+ TY+TL+SGL + G++  A +L + MK   + P +
Sbjct: 628 CQEGKVDAA----ERLTENGCEPTIDTYSTLVSGLCREGRSNEASQLVENMKEKGLSPSM 683

Query: 404 STYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHK 463
             Y  L+   CK+  V  A+++F+++ +  F+  + I+  LI  LC   R + A  +F  
Sbjct: 684 EIYCSLLVAHCKSLKVDCALEIFNLMAVKGFQPHLFIYKVLICALCGVSRAEEALNIFQS 743

Query: 464 LPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTF 511
           L +K     ++ +++++ GL ++G  +    FL  ME   C P++ T+
Sbjct: 744 LLKKQWNSDLIVWTVLVDGLLQEGDSDLCMKFLYLMESRNCTPSLHTY 791



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 106/377 (28%), Positives = 202/377 (53%), Gaps = 3/377 (0%)

Query: 184 ENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGN 243
           ++GL   T ++S++ ++  L K  +V  A+ ++ ++   G+ P+++   T+I+  C  G 
Sbjct: 154 DSGLFGFT-LYSFNTLLLQLGKFDMVTSAQNVYAQIFSSGVKPSLLTFNTMINILCKKGK 212

Query: 244 WEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNS 303
            +E   +F ++      P+  T+  +I   C+  K+++A  + + M++ G NP+  TY++
Sbjct: 213 VQEAVLVFNKIFQFDLCPDAFTYTSLILGHCRNRKLDKAFEVFDRMVKDGCNPNSVTYST 272

Query: 304 LMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNG 363
           L++G C  GRI  A ++   M  KG + TV +Y + I+  C I  V++A++L R +   G
Sbjct: 273 LINGLCNEGRIGEAMDMLEEMTEKGIEPTVYTYTVPISSLCDIGRVDDAINLVRSMGKKG 332

Query: 364 VRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAV 423
              +V TY  ++SGLF+AG+   A  ++ +M    + P+  TYN LI+ LC       A+
Sbjct: 333 CSPSVQTYTAIISGLFRAGKMELAIGMYHKMLKEGLVPNTVTYNALINELCTEGRFGIAL 392

Query: 424 KLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGL 483
           K+F  +E +      + +N +I GL     ++ A  +F+K+ + G  PTVVTY+ +I   
Sbjct: 393 KIFDWMEGHGTLANAQTYNQIIKGLFGMDDIEKAMVVFNKMLKDGPSPTVVTYNTLIVEN 452

Query: 484 CRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVP 543
            ++G L  A  FL  M+++ C P+  T+  L+ GF +  K        ++M +    + P
Sbjct: 453 LKRGYLNNATRFLYMMKESNCEPDERTYCELISGFCKGGKLDSATSFFYEMLKC--GISP 510

Query: 544 DDTTFSIVVDLLAKDEK 560
           +  T++ ++D   K+ K
Sbjct: 511 NQWTYTAMIDGYCKEGK 527



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 109/374 (29%), Positives = 174/374 (46%), Gaps = 19/374 (5%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
           N  + EN K G   LN A  F   M      P   ++  L     K    D+  SF+ ++
Sbjct: 446 NTLIVENLKRGY--LNNATRFLYMMKESNCEPDERTYCELISGFCKGGKLDSATSFFYEM 503

Query: 102 VSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLING 161
           +  G+ P+  T   +I+       G C E +I  A  LF+ M   G    + TY  +I+G
Sbjct: 504 LKCGISPNQWTYTAMID-------GYCKEGKIDVALSLFERMEENGCSASIETYNAIISG 556

Query: 162 FCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKG 221
             +    S A +   KM     E GL  + N  +Y+ +I+ LCK    + A ++F EM+ 
Sbjct: 557 LSKGNRFSEAEKFCAKMT----EQGL--QPNTITYTSLINGLCKNTATNLAFKIFHEMEK 610

Query: 222 RGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINE 281
           +   P     T+LI+G C  G  +    L     + G  P + T++ ++  LC+ G+ NE
Sbjct: 611 KNCLPNAHTYTSLIYGLCQEGKVDAAERL----TENGCEPTIDTYSTLVSGLCREGRSNE 666

Query: 282 ANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILIN 341
           A+ L+E M ++GL+P    Y SL+  +C   ++D A EIF  M  KG +  +  Y +LI 
Sbjct: 667 ASQLVENMKEKGLSPSMEIYCSLLVAHCKSLKVDCALEIFNLMAVKGFQPHLFIYKVLIC 726

Query: 342 GYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEP 401
             C +   EEA+++++ ++       +I +  L+ GL Q G +    K    M+  N  P
Sbjct: 727 ALCGVSRAEEALNIFQSLLKKQWNSDLIVWTVLVDGLLQEGDSDLCMKFLYLMESRNCTP 786

Query: 402 DLSTYNILIDGLCK 415
            L TY IL   L K
Sbjct: 787 SLHTYIILARELSK 800



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 105/402 (26%), Positives = 181/402 (45%), Gaps = 17/402 (4%)

Query: 52  GIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFL 111
           G+ ++ +A   F  M    PSP + ++N L     K  + +    F   +      PD  
Sbjct: 419 GMDDIEKAMVVFNKMLKDGPSPTVVTYNTLIVENLKRGYLNNATRFLYMMKESNCEPDER 478

Query: 112 TLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVA 171
           T   LI+       G C   ++  AT  F  M+  G+ P+  TY  +I+G+C+ G + VA
Sbjct: 479 TYCELIS-------GFCKGGKLDSATSFFYEMLKCGISPNQWTYTAMIDGYCKEGKIDVA 531

Query: 172 LRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVC 231
           L L ++M     ENG     +I +Y+ II  L K     +A++   +M  +G+ P  +  
Sbjct: 532 LSLFERM----EENG--CSASIETYNAIISGLSKGNRFSEAEKFCAKMTEQGLQPNTITY 585

Query: 232 TTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQ 291
           T+LI+G C          +F EM      PN  T+  +I  LC+ GK++ A    E + +
Sbjct: 586 TSLINGLCKNTATNLAFKIFHEMEKKNCLPNAHTYTSLIYGLCQEGKVDAA----ERLTE 641

Query: 292 RGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEE 351
            G  P   TY++L+ G C  GR + A ++  +M  KG   ++  Y  L+  +CK L V+ 
Sbjct: 642 NGCEPTIDTYSTLVSGLCREGRSNEASQLVENMKEKGLSPSMEIYCSLLVAHCKSLKVDC 701

Query: 352 AMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILID 411
           A+ ++  +   G +  +  Y  L+  L    +A  A  +F  +       DL  + +L+D
Sbjct: 702 ALEIFNLMAVKGFQPHLFIYKVLICALCGVSRAEEALNIFQSLLKKQWNSDLIVWTVLVD 761

Query: 412 GLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGR 453
           GL +       +K  +++E       +  +  L   L K G+
Sbjct: 762 GLLQEGDSDLCMKFLYLMESRNCTPSLHTYIILARELSKVGK 803


>gi|22135795|gb|AAM91084.1| AT4g28010/T13J8_120 [Arabidopsis thaliana]
          Length = 704

 Score =  242 bits (618), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 179/589 (30%), Positives = 273/589 (46%), Gaps = 49/589 (8%)

Query: 31  IAAVSSPETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRH 90
           + A S  ET+L       C+     L  A   F        S   +  NL+   + ++R+
Sbjct: 33  VNAFSETETKLRSL----CEDSNPQLKNAVSVFQQAVDSGSSLAFAGSNLM-AKLVRSRN 87

Query: 91  YDAVISFYRKLVSIGLLPDFLTLNILINCFGNKER------------------------- 125
           ++   SFYRK++      +F++L+ L+ C+    +                         
Sbjct: 88  HELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNI 147

Query: 126 ---GLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGD 182
              GLC      +A  L + M    + PDV +Y T+I GFC    L  AL L  +M    
Sbjct: 148 LLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEM---- 203

Query: 183 YENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAG 242
              G     ++ ++ I+ID+ CK G +D+A     EMK  G+   +VV T+LI GFC  G
Sbjct: 204 --KGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCG 261

Query: 243 NWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYN 302
             +    LF E+L+ G  P  +T+N +I   CK G++ EA+ + E MI+RG+ P+ +TY 
Sbjct: 262 ELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYT 321

Query: 303 SLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISN 362
            L+DG C VG+   A +    M  K  +   V+YNI+IN  CK   V +A+ +   +   
Sbjct: 322 GLIDGLCGVGKTKEALQPLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKR 381

Query: 363 GVRQTVITYNTLLSGLFQAGQAGYAQKLFDEM--KLYNVEPDLSTYNILIDGLCKNNCVQ 420
             R   ITYN LL GL   G    A KL   M       +PD+ +YN LI GLCK N + 
Sbjct: 382 RTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLH 441

Query: 421 EAVKLFHMLEMNKFEFGIEI-FNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIM 479
           +A+ ++ +L + K   G  +  N L++   KAG ++ A EL+ ++    +V    TY+ M
Sbjct: 442 QALDIYDLL-VEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAM 500

Query: 480 IHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPER 539
           I G C+ G L  A   L  M  +   P+V  +N L+    +     +   L  +M     
Sbjct: 501 IDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRD-- 558

Query: 540 NLVPDDTTFSIVVD--LLAKDEKYHECSAVSKSSYRACLYVTIFQPSSL 586
           N  PD  +F+I++D  L A D K  E   V  S  RA L   +F  S L
Sbjct: 559 NNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMS--RAGLSPDLFTYSKL 605



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 143/524 (27%), Positives = 248/524 (47%), Gaps = 53/524 (10%)

Query: 54  INLNEARYFFGYMTHMQP---SPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDF 110
           + + +  + FG +  M     +  + + N+L   + +N      +S  R++    L+PD 
Sbjct: 118 VQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDV 177

Query: 111 LTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSV 170
            + N +I       RG C    +++A  L   M   G    ++T+G LI+ FC+ G +  
Sbjct: 178 FSYNTVI-------RGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDE 230

Query: 171 ALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVV 230
           A+   K+M     E  L+       Y+ +I   C  G +D+ K LF E+  RG +P  + 
Sbjct: 231 AMGFLKEMKFMGLEADLVV------YTSLIRGFCDCGELDRGKALFDEVLERGDSPCAIT 284

Query: 231 CTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNL--------------------------- 263
             TLI GFC  G  +E + +F  M++ G RPN+                           
Sbjct: 285 YNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQPLNLMI 344

Query: 264 --------LTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRID 315
                   +T+N++I+ LCK G + +A  ++ELM +R   PD  TYN L+ G C  G +D
Sbjct: 345 EKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLD 404

Query: 316 TAREIFLSM--HSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNT 373
            A ++   M   S      V+SYN LI+G CK   + +A+ +Y  ++        +T N 
Sbjct: 405 EASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNI 464

Query: 374 LLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNK 433
           LL+   +AG    A +L+ ++    +  +  TY  +IDG CK   +  A  L   + +++
Sbjct: 465 LLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSE 524

Query: 434 FEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKAN 493
            +  +  +NCL+  LCK G LD AW LF ++ +    P VV+++IMI G  + G ++ A 
Sbjct: 525 LQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAE 584

Query: 494 DFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEP 537
             L+ M + G +P++ T++ L++ FL+     + +    KM + 
Sbjct: 585 SLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDS 628



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 88/375 (23%), Positives = 167/375 (44%), Gaps = 15/375 (4%)

Query: 52  GIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFL 111
           G+    EA      M      P   ++N++   + K+      +     +      PD +
Sbjct: 329 GVGKTKEALQPLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNI 388

Query: 112 TLNILINCFGNKERGLCVENRIKEATWLFKNMIAFG--VRPDVITYGTLINGFCRTGNLS 169
           T NIL+        GLC +  + EA+ L   M+       PDVI+Y  LI+G C+   L 
Sbjct: 389 TYNILLG-------GLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLH 441

Query: 170 VALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVV 229
            AL ++  +V        +   +  + +I+++S  K G V+KA EL+ ++    I     
Sbjct: 442 QALDIYDLLVEK------LGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSD 495

Query: 230 VCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELM 289
             T +I GFC  G      GL  +M     +P++  +N ++  LCK G +++A  L E M
Sbjct: 496 TYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEM 555

Query: 290 IQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNV 349
            +    PD  ++N ++DG    G I +A  + + M   G    + +Y+ LIN + K+  +
Sbjct: 556 QRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYL 615

Query: 350 EEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNIL 409
           +EA+S + +++ +G        +++L      G+     +L  ++   ++  D      +
Sbjct: 616 DEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVDKDIVLDKELTCTV 675

Query: 410 IDGLCKNNCVQEAVK 424
           +D +C ++   +  K
Sbjct: 676 MDYMCNSSANMDLAK 690


>gi|225434273|ref|XP_002276453.1| PREDICTED: pentatricopeptide repeat-containing protein At5g65560
           [Vitis vinifera]
 gi|296084392|emb|CBI24780.3| unnamed protein product [Vitis vinifera]
          Length = 890

 Score =  242 bits (617), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 153/482 (31%), Positives = 242/482 (50%), Gaps = 25/482 (5%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
           P +  +N +  +++K    D + + Y +L++  + P+  T N ++N       G C    
Sbjct: 157 PTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQISPNIYTFNAMVN-------GYCKIGN 209

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLI---- 188
           + EA      ++  G+ PD  TY +LI G CR            K V   YE  LI    
Sbjct: 210 VVEAELYASKIVQAGLHPDTFTYTSLILGHCRN-----------KGVDNAYEVFLIMPQK 258

Query: 189 -SKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEV 247
             + N  SY+ +I  LC+ G +++A +LF +M      P V   T LI+    +G   E 
Sbjct: 259 GCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEA 318

Query: 248 NGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDG 307
             LF EM + G  PN+ T+ V+ID LCK  K++EA  +L  M ++GL P   TYN+L+DG
Sbjct: 319 LNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDG 378

Query: 308 YCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQT 367
           YC  G ID A EI   M S  C     +YN LI G CK   V +AM+L  +++   +  +
Sbjct: 379 YCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPS 438

Query: 368 VITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFH 427
           +ITYN+L+ G  +      A +L   M    + PD  TY++ ID LCK   V+EA  LF 
Sbjct: 439 LITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFD 498

Query: 428 MLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKG 487
            ++    +    I+  LIDG CK G++D A+ L  ++     +P   TY+++I GLC++ 
Sbjct: 499 SVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEK 558

Query: 488 KLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTT 547
           K+++A+  +  M   G  P VVT+  L+   L++      +++ + M        PD  T
Sbjct: 559 KMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMV--SLGYQPDVCT 616

Query: 548 FS 549
           ++
Sbjct: 617 YT 618



 Score =  218 bits (556), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 153/518 (29%), Positives = 247/518 (47%), Gaps = 42/518 (8%)

Query: 51  SGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDF 110
           S  + ++E +  +  + + Q SP I +FN +     K  +      +  K+V  GL PD 
Sbjct: 170 SKFLLIDEMKTVYLELLNNQISPNIYTFNAMVNGYCKIGNVVEAELYASKIVQAGLHPDT 229

Query: 111 LTLNILI--NC--------------------------FGNKERGLCVENRIKEATWLFKN 142
            T   LI  +C                          + N   GLC   RI EA  LF +
Sbjct: 230 FTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFAD 289

Query: 143 MIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDS 202
           M      P V TY  LI     +G    AL L  +M     E G   + N+ +Y+++ID 
Sbjct: 290 MTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEM----KEKG--CEPNVHTYTVLIDG 343

Query: 203 LCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPR-- 260
           LCKE  +D+A+++  EM  +G+ P+VV    LI G+C  G  ++      E+LDL     
Sbjct: 344 LCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDA----FEILDLMESNS 399

Query: 261 --PNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAR 318
             PN  T+N +I  LCK  K+++A  LL  M++R L+P   TYNSL+ G C V  +++A 
Sbjct: 400 CGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAY 459

Query: 319 EIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGL 378
            +   M+  G      +Y++ I+  CK   VEEA +L+  + + GV+   + Y  L+ G 
Sbjct: 460 RLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGY 519

Query: 379 FQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGI 438
            + G+   A  L + M      P+  TYN+LI+GLCK   ++EA  L   +     +  +
Sbjct: 520 CKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTV 579

Query: 439 EIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLY 498
             +  LI  + K G  D+A ++F+ +   G  P V TY+  +H    +G LE+ +D +  
Sbjct: 580 VTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAK 639

Query: 499 MEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAE 536
           M + G  P++VT+  L+ G+ +   T +  + L  M +
Sbjct: 640 MNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVD 677



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 142/436 (32%), Positives = 217/436 (49%), Gaps = 28/436 (6%)

Query: 140 FKNMIAF--GVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYS 197
           F N IA   G + +V +Y +++N   R   L VA ++   M                   
Sbjct: 87  FFNWIALRPGFKHNVHSYSSMLNILIRARLLGVAEKIRISM------------------- 127

Query: 198 IIIDSLCKEGLVDKAKELFLEMKGRG---INPAVVVCTTLIHGFCCAGNWEEVNGLFIEM 254
             I S C    V    E+F +M   G     P +    T++         +E+  +++E+
Sbjct: 128 --IKSCCSIEDVLFVLEVFRKMNADGEFKFKPTLRCYNTILMSLSKFLLIDEMKTVYLEL 185

Query: 255 LDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRI 314
           L+    PN+ TFN M++  CK G + EA      ++Q GL+PD FTY SL+ G+C    +
Sbjct: 186 LNNQISPNIYTFNAMVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGV 245

Query: 315 DTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTL 374
           D A E+FL M  KGC+   VSY  LI+G C+   + EA+ L+  +  +    TV TY  L
Sbjct: 246 DNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVL 305

Query: 375 LSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKF 434
           +  L  +G+   A  LF+EMK    EP++ TY +LIDGLCK N + EA K+   +     
Sbjct: 306 IYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGL 365

Query: 435 EFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKAND 494
              +  +N LIDG CK G +D+A+E+   +      P   TY+ +I GLC+K K+ KA  
Sbjct: 366 IPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMA 425

Query: 495 FLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDL 554
            L  M +   +P+++T+N+L+HG  + N       LL  M   E  LVPD  T+S+ +D 
Sbjct: 426 LLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMN--ENGLVPDQWTYSVFIDT 483

Query: 555 LAKDEKYHECSAVSKS 570
           L K+ +  E   +  S
Sbjct: 484 LCKEGRVEEAGTLFDS 499



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 135/450 (30%), Positives = 220/450 (48%), Gaps = 16/450 (3%)

Query: 75  ISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIK 134
           +S  NL+ G     R  +A +  +  +      P   T  +LI       R +       
Sbjct: 265 VSYTNLIHGLCEAGRINEA-LKLFADMTEDNCCPTVRTYTVLIYALSGSGRKV------- 316

Query: 135 EATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIF 194
           EA  LF  M   G  P+V TY  LI+G C+   +  A    +KM+S   E GLI   ++ 
Sbjct: 317 EALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEA----RKMLSEMSEKGLIP--SVV 370

Query: 195 SYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEM 254
           +Y+ +ID  CKEG++D A E+   M+     P       LI G C      +   L  +M
Sbjct: 371 TYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKM 430

Query: 255 LDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRI 314
           L+    P+L+T+N +I   CK   +  A  LL LM + GL PD++TY+  +D  C  GR+
Sbjct: 431 LERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRV 490

Query: 315 DTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTL 374
           + A  +F S+ +KG K   V Y  LI+GYCK+  ++ A SL  +++++       TYN L
Sbjct: 491 EEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVL 550

Query: 375 LSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLF-HMLEMNK 433
           + GL +  +   A  L  +M    V+P + TY ILI  + K+     A+K+F HM+ +  
Sbjct: 551 IEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLG- 609

Query: 434 FEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKAN 493
           ++  +  +   +      G L+   ++  K+ ++G++P +VTY+++I G  R G   +A 
Sbjct: 610 YQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAF 669

Query: 494 DFLLYMEKNGCAPNVVTFNTLMHGFLQNNK 523
           DFL  M   GC P++   + L+      N+
Sbjct: 670 DFLKCMVDTGCKPSLYIVSILIKNLSHENR 699



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 147/530 (27%), Positives = 240/530 (45%), Gaps = 33/530 (6%)

Query: 56  LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNI 115
           ++EAR     M+     P + ++N L     K    D        + S    P+  T N 
Sbjct: 350 MDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNE 409

Query: 116 LINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLH 175
           LI C      GLC + ++ +A  L   M+   + P +ITY +LI+G C+  +L  A RL 
Sbjct: 410 LI-C------GLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLL 462

Query: 176 KKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLI 235
             M     ENGL+     ++YS+ ID+LCKEG V++A  LF  +K +G+    V+ T LI
Sbjct: 463 SLM----NENGLVPDQ--WTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALI 516

Query: 236 HGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLN 295
            G+C  G  +    L   ML+    PN  T+NV+I+ LCK  K+ EA+ L+  M+  G+ 
Sbjct: 517 DGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVK 576

Query: 296 PDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSL 355
           P   TY  L+      G  D A ++F  M S G +  V +Y   ++ Y     +EE   +
Sbjct: 577 PTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDV 636

Query: 356 YRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCK 415
             ++   G+   ++TY  L+ G  + G    A      M     +P L   +ILI  L  
Sbjct: 637 IAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSH 696

Query: 416 NNCVQE------------------AVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNA 457
            N ++E                  A+KLF  +  +     + I+  LI G C+  RL+ A
Sbjct: 697 ENRMKETRSEIGIDSVSNTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEA 756

Query: 458 WELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHG 517
             L H + ++G+ P+   Y+ ++   C+ G   +A   +  M +NG  P + ++  L+ G
Sbjct: 757 QGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCG 816

Query: 518 FLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAV 567
                   K   + H +     N   D+  + +++D L K +   ECS +
Sbjct: 817 LYIEGSNEKAKAVFHGLLSCGYNY--DEVAWKVLIDGLLKRDLVDECSEL 864



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 135/501 (26%), Positives = 232/501 (46%), Gaps = 34/501 (6%)

Query: 37  PETQ-LNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVI 95
           P T+  NE +   CK     +++A      M   + SP + ++N L     K    ++  
Sbjct: 402 PNTRTYNELICGLCKKR--KVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAY 459

Query: 96  SFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITY 155
                +   GL+PD  T ++ I+        LC E R++EA  LF ++ A GV+ + + Y
Sbjct: 460 RLLSLMNENGLVPDQWTYSVFIDT-------LCKEGRVEEAGTLFDSVKAKGVKANEVIY 512

Query: 156 GTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKEL 215
             LI+G+C+ G + VA  L ++M++           N ++Y+++I+ LCKE  + +A  L
Sbjct: 513 TALIDGYCKVGKIDVAYSLLERMLND------ACLPNSYTYNVLIEGLCKEKKMKEASSL 566

Query: 216 FLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCK 275
             +M   G+ P VV  T LI      G ++    +F  M+ LG +P++ T+   +     
Sbjct: 567 VAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFS 626

Query: 276 GGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVS 335
            G + E + ++  M + G+ PD  TY  L+DGY  +G    A +    M   GCK ++  
Sbjct: 627 QGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYI 686

Query: 336 YNILI------------------NGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSG 377
            +ILI                  +     L  E A+ L+ +++ +G    V  Y  L++G
Sbjct: 687 VSILIKNLSHENRMKETRSEIGIDSVSNTLEYEIALKLFEKMVEHGCTIDVSIYGALIAG 746

Query: 378 LFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFG 437
             Q  +   AQ L   MK   + P    YN L+D  CK     EAV+L   +  N     
Sbjct: 747 FCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPL 806

Query: 438 IEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLL 497
           +E +  L+ GL   G  + A  +FH L   G     V + ++I GL ++  +++ ++ + 
Sbjct: 807 LESYKLLVCGLYIEGSNEKAKAVFHGLLSCGYNYDEVAWKVLIDGLLKRDLVDECSELID 866

Query: 498 YMEKNGCAPNVVTFNTLMHGF 518
            ME+ GC PN +T++ L+ G 
Sbjct: 867 IMEEKGCQPNPLTYSLLIEGL 887


>gi|449455685|ref|XP_004145582.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
           chloroplastic-like [Cucumis sativus]
          Length = 1113

 Score =  242 bits (617), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 147/484 (30%), Positives = 256/484 (52%), Gaps = 15/484 (3%)

Query: 77  SFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEA 136
           S+N L   + ++      +  YR++VS GL P   T + L+   G K     V       
Sbjct: 194 SYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMV------- 246

Query: 137 TWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSY 196
             L K M   G+RP+V T+   I    R G +  A  + ++M   D E       ++ +Y
Sbjct: 247 MVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRM---DDEG---CGPDLVTY 300

Query: 197 SIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLD 256
           +++ID+LC  G ++ AKELF++MK  G  P  V+  TL+  F   G+ +     + +M  
Sbjct: 301 TVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEA 360

Query: 257 LGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDT 316
            G  P+++TF +++D LCK    +EA    ++M ++G+ P+  TYN+L+ G    GRI+ 
Sbjct: 361 DGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIED 420

Query: 317 AREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLS 376
           A ++  +M S G + T  +YNI I+ + K     +A+  + ++ + G+   ++  N  L 
Sbjct: 421 ALKLLGTMESVGVQPTAYTYNIFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLY 480

Query: 377 GLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEF 436
            L + G+   A+ +F+ ++   + PD  TYN+++    K   V EAV L   +  N  E 
Sbjct: 481 SLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEP 540

Query: 437 GIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFL 496
            + + N LID L KAGR+D AW++F ++    L PTVVTY+ ++ GL ++G+++KA +  
Sbjct: 541 DVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELF 600

Query: 497 LYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLA 556
             M +  C+PN ++FNTL+  F +N++    +++  KM     +  PD  T++ V+  L 
Sbjct: 601 ESMIEKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMT--VMDCKPDVLTYNTVIYGLI 658

Query: 557 KDEK 560
           K+ K
Sbjct: 659 KENK 662



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 148/540 (27%), Positives = 254/540 (47%), Gaps = 53/540 (9%)

Query: 55  NLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLN 114
           +L+  + F+  M      P + +F +L   + K R +D   + +  +   G+LP+  T N
Sbjct: 347 DLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYN 406

Query: 115 ILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRL 174
            LI C      GL    RI++A  L   M + GV+P   TY   I+ F ++G    A+  
Sbjct: 407 TLI-C------GLLRAGRIEDALKLLGTMESVGVQPTAYTYNIFIDYFGKSGETGKAVET 459

Query: 175 HKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTL 234
            +KM +     G++   NI + +  + SL + G + +AK +F  ++  G+ P  V    +
Sbjct: 460 FEKMKA----KGIVP--NIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMM 513

Query: 235 IHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGL 294
           +  +   G  +E   L  EM+  G  P+++  N +ID L K G+++EA  + + M    L
Sbjct: 514 MKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKL 573

Query: 295 NPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMS 354
           +P   TYN+L+ G    GR+  A E+F SM  K C    +S+N L++ +CK   VE A+ 
Sbjct: 574 SPTVVTYNTLLSGLGKEGRVQKAIELFESMIEKKCSPNTISFNTLLDCFCKNDEVELALK 633

Query: 355 LYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLC 414
           ++ ++     +  V+TYNT++ GL +  +  +A   F ++K  ++ PD  T   L+ GL 
Sbjct: 634 MFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQLK-KSMHPDHVTICTLLPGLV 692

Query: 415 KNNCVQEAVKLFH-MLEMNKFEFGIEIFNCLIDG-------------------------- 447
           K   + +A+ +    +   +F      +  L+ G                          
Sbjct: 693 KCGQIGDAISIARDFMYQVRFRVNRSFWEDLMGGTLVEAEMDKAIIFAEELVLNGICRED 752

Query: 448 ---------LCKAGRLDNAWELFHKLPQK-GLVPTVVTYSIMIHGLCRKGKLEKANDFLL 497
                    LCK  R   A+++F K  +K G+ PT+ +Y+ +I  L      EKA D   
Sbjct: 753 SFLIPLVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFK 812

Query: 498 YMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAK 557
            M+  GCAP+  TFN L+    ++ K +++ EL  +M    R   PD  T++IV+  LAK
Sbjct: 813 DMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMIS--RRCKPDAITYNIVISSLAK 870



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 139/572 (24%), Positives = 247/572 (43%), Gaps = 73/572 (12%)

Query: 19   VKLSSLFKSPRQIAAVSSPETQLNEFLHENCKSGIINLN-------------EARYFFGY 65
            V  + + K   ++  V      L+E +   C+  +I +N             EA   F  
Sbjct: 508  VTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDR 567

Query: 66   MTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKER 125
            M  M+ SP + ++N L   + K       I  +  ++     P+ ++ N L++CF   + 
Sbjct: 568  MKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIEKKCSPNTISFNTLLDCFCKNDE 627

Query: 126  ----------------------------GLCVENRIKEATWLFKNMIAFGVRPDVITYGT 157
                                        GL  EN++  A W F + +   + PD +T  T
Sbjct: 628  VELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFF-HQLKKSMHPDHVTICT 686

Query: 158  LINGFCRTGNLSVALRLHKK----------------MVSGDYENGLISKTNIFSYSIIID 201
            L+ G  + G +  A+ + +                 ++ G      + K  IF+  ++++
Sbjct: 687  LLPGLVKCGQIGDAISIARDFMYQVRFRVNRSFWEDLMGGTLVEAEMDKAIIFAEELVLN 746

Query: 202  SLCKEG---------LVDKAKELFLEM------KGRGINPAVVVCTTLIHGFCCAGNWEE 246
             +C+E          L    +EL+         K  GI+P +     LI         E+
Sbjct: 747  GICREDSFLIPLVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEK 806

Query: 247  VNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMD 306
               LF +M ++G  P+  TFN+++    K GKI E   L + MI R   PD  TYN ++ 
Sbjct: 807  AWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVIS 866

Query: 307  GYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQ 366
                   +D A + F  + S   + T  +Y  LI+G  K+  +EEAM L+ ++   G + 
Sbjct: 867  SLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKP 926

Query: 367  TVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLF 426
                +N L++G  + G    A +LF  M    + PDL +Y IL+D LC    V EA+  F
Sbjct: 927  NCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYF 986

Query: 427  HMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRK 486
            + L+    +     +N +I+GL K+ R++ A  L++++  +G+VP + TY+ ++  L   
Sbjct: 987  NELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLA 1046

Query: 487  GKLEKANDFLLYMEKNGCAPNVVTFNTLMHGF 518
            G +E+A      ++  G  P+V T+N L+ G+
Sbjct: 1047 GMVEQAKRMYEELQLAGLEPDVFTYNALIRGY 1078



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 133/481 (27%), Positives = 229/481 (47%), Gaps = 10/481 (2%)

Query: 127 LCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENG 186
           L V +++++   +F+ M    +R D+ TY T+       G L     +  KM    +   
Sbjct: 132 LRVHDKVEDMAAVFEFMQKKIIRRDLDTYLTIFKALSIRGGLRQMTTVLNKMRKAGF--- 188

Query: 187 LISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEE 246
                N +SY+ +I  L + G   +A E++  M   G+ P++   + L+       + E 
Sbjct: 189 ---VLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEM 245

Query: 247 VNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMD 306
           V  L  EM DLG RPN+ TF + I  L + GKI+EA  +   M   G  PD  TY  L+D
Sbjct: 246 VMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLID 305

Query: 307 GYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQ 366
             C  G+++ A+E+F+ M + G K   V Y  L++ +    +++     + Q+ ++G   
Sbjct: 306 ALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMP 365

Query: 367 TVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLF 426
            V+T+  L+  L +A     A   FD M+   + P+L TYN LI GL +   +++A+KL 
Sbjct: 366 DVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLL 425

Query: 427 HMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRK 486
             +E    +     +N  ID   K+G    A E F K+  KG+VP +V  +  ++ L   
Sbjct: 426 GTMESVGVQPTAYTYNIFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEM 485

Query: 487 GKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERN-LVPDD 545
           G+L +A      + +NG AP+ VT+N +M  + +  +  + V LL +M    RN   PD 
Sbjct: 486 GRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMI---RNGCEPDV 542

Query: 546 TTFSIVVDLLAKDEKYHECSAVSKSSYRACLYVTIFQPSSLGSMIGCTVRLMPQPEMSDT 605
              + ++D L K  +  E   +        L  T+   ++L S +G   R+    E+ ++
Sbjct: 543 IVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFES 602

Query: 606 L 606
           +
Sbjct: 603 M 603



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 133/538 (24%), Positives = 251/538 (46%), Gaps = 53/538 (9%)

Query: 49   CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
            C S +  ++EA      M      P +   N L  ++ K    D     + ++  + L P
Sbjct: 516  CYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSP 575

Query: 109  DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
              +T N L++       GL  E R+++A  LF++MI     P+ I++ TL++ FC+   +
Sbjct: 576  TVVTYNTLLS-------GLGKEGRVQKAIELFESMIEKKCSPNTISFNTLLDCFCKNDEV 628

Query: 169  SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
             +AL++  KM   D       K ++ +Y+ +I  L KE  V+ A   F ++K + ++P  
Sbjct: 629  ELALKMFSKMTVMD------CKPDVLTYNTVIYGLIKENKVNHAFWFFHQLK-KSMHPDH 681

Query: 229  VVCTTLIHGFCCAGN-----------------------WEEVNG------------LFIE 253
            V   TL+ G    G                        WE++ G            +F E
Sbjct: 682  VTICTLLPGLVKCGQIGDAISIARDFMYQVRFRVNRSFWEDLMGGTLVEAEMDKAIIFAE 741

Query: 254  MLDLGPRPNLLTFNV-MIDCLCKGGKINEANGLLELMIQR-GLNPDRFTYNSLMDGYCLV 311
             L L       +F + ++  LCK  +   A  + +   ++ G++P   +YN L+     V
Sbjct: 742  ELVLNGICREDSFLIPLVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEV 801

Query: 312  GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
               + A ++F  M + GC     ++N+L+  + K   + E   LY+++IS   +   ITY
Sbjct: 802  HYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITY 861

Query: 372  NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
            N ++S L ++     A   F ++   +  P   TY  LIDGL K   ++EA++LF  +  
Sbjct: 862  NIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSD 921

Query: 432  NKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEK 491
               +    IFN LI+G  K G  + A +LF ++  +G+ P + +Y+I++  LC  G++++
Sbjct: 922  YGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDE 981

Query: 492  ANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFS 549
            A  +   ++  G  P+ + +N +++G  ++ +  + + L ++M    R +VPD  T++
Sbjct: 982  ALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMR--NRGIVPDLYTYN 1037



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 97/322 (30%), Positives = 159/322 (49%), Gaps = 16/322 (4%)

Query: 20   KLSSLFKSPRQIAAVSSPETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFN 79
            K   LFK  + +       T  N  L  + KSG I   E    +  M   +  P   ++N
Sbjct: 806  KAWDLFKDMKNVGCAPDAFT-FNMLLAVHGKSGKIT--ELFELYKEMISRRCKPDAITYN 862

Query: 80   LLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWL 139
            ++  ++AK+ + D  + F+  LVS    P   T   LI+       GL    R++EA  L
Sbjct: 863  IVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLID-------GLAKVGRLEEAMRL 915

Query: 140  FKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSII 199
            F+ M  +G +P+   +  LING+ + G+   A +L K+MV+     G+  + ++ SY+I+
Sbjct: 916  FEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVN----EGI--RPDLKSYTIL 969

Query: 200  IDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGP 259
            +D LC  G VD+A   F E+K  G++P  +    +I+G   +   EE   L+ EM + G 
Sbjct: 970  VDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGI 1029

Query: 260  RPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTARE 319
             P+L T+N ++  L   G + +A  + E +   GL PD FTYN+L+ GY L    + A  
Sbjct: 1030 VPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALIRGYSLSENPEHAYT 1089

Query: 320  IFLSMHSKGCKHTVVSYNILIN 341
            ++ +M   GC   + +Y  L N
Sbjct: 1090 VYKNMMVDGCNPNIGTYAQLPN 1111



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 47/192 (24%), Positives = 84/192 (43%), Gaps = 2/192 (1%)

Query: 364 VRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAV 423
           V  T  T N +L  L    +      +F+ M+   +  DL TY  +   L     +++  
Sbjct: 118 VLHTTETCNFMLEFLRVHDKVEDMAAVFEFMQKKIIRRDLDTYLTIFKALSIRGGLRQMT 177

Query: 424 KLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGL 483
            + + +    F      +N LI  L ++G    A E++ ++  +GL P++ TYS ++  L
Sbjct: 178 TVLNKMRKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVAL 237

Query: 484 CRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVP 543
            +K   E     L  ME  G  PNV TF   +    +  K  +  E+  +M   +    P
Sbjct: 238 GKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRM--DDEGCGP 295

Query: 544 DDTTFSIVVDLL 555
           D  T+++++D L
Sbjct: 296 DLVTYTVLIDAL 307


>gi|302766715|ref|XP_002966778.1| hypothetical protein SELMODRAFT_62477 [Selaginella moellendorffii]
 gi|300166198|gb|EFJ32805.1| hypothetical protein SELMODRAFT_62477 [Selaginella moellendorffii]
          Length = 480

 Score =  242 bits (617), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 153/479 (31%), Positives = 240/479 (50%), Gaps = 16/479 (3%)

Query: 58  EARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILI 117
           +A      M +   SP + S  LL     K+  +    S   +++  GL P+ +  N LI
Sbjct: 12  QAEAIVEEMKYAGFSPDVQSHCLLIRGFFKSGSFQRGCSQLDRMLEAGLFPNAILYNNLI 71

Query: 118 NCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKK 177
           +C       LC    + EA    K M      P+V++Y  +I+G+C+  N+  AL   ++
Sbjct: 72  SC-------LCKAGMLAEAESYLKRMPQHCA-PNVVSYNIIIDGYCKARNIEKALAFLRE 123

Query: 178 MVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHG 237
           M        L       +YS I+ S CK G V KA ++F EM  +G  P +V    L+ G
Sbjct: 124 M------EELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSG 177

Query: 238 FCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPD 297
              A    E   LF  M   G +P+++T+N MI  LCK  K++EA  LLE M Q  ++P 
Sbjct: 178 LWRARKIHEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSPT 237

Query: 298 RFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYN--ILINGYCKILNVEEAMSL 355
             TY +L+D  C   R+  A E+F  M    C  T  +Y+  ILING CK     EA  +
Sbjct: 238 FVTYTTLIDHLCKFARLQQAYEVFEKMAEGPCPCTEPAYSVLILINGLCKARRPGEAKEM 297

Query: 356 YRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCK 415
           ++++   G+  TV+TYNTLL GL    +   A +L   M      P++ TY ILI  LCK
Sbjct: 298 FQEMRGRGISPTVVTYNTLLEGLLSTAKLQDAMELTYFMLDQVPAPNMFTYEILISSLCK 357

Query: 416 NNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVT 475
            + V+EA KL   +    F   ++I+  L+  L +AGRLD+A+EL+ ++ +      V +
Sbjct: 358 TDQVEEAFKLLSAMRDKGFVPSLKIWEVLLSRLARAGRLDDAFELYKEMSRINCQQLVGS 417

Query: 476 YSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKM 534
            +I++ G+ R+G +++A DFL  M   G  P+  T++ L+ G     K  +  +L+ ++
Sbjct: 418 SNILLDGILRRGSVDEAKDFLKQMTDTGIVPDKFTYDKLVVGLCWQGKADQARKLVEEL 476



 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 134/458 (29%), Positives = 226/458 (49%), Gaps = 34/458 (7%)

Query: 105 GLLPDFLTLNILINCF---GNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLING 161
           G  PD  +  +LI  F   G+ +RG    +R+ EA          G+ P+ I Y  LI+ 
Sbjct: 24  GFSPDVQSHCLLIRGFFKSGSFQRGCSQLDRMLEA----------GLFPNAILYNNLISC 73

Query: 162 FCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKG 221
            C+ G L+ A    K+M             N+ SY+IIID  CK   ++KA     EM+ 
Sbjct: 74  LCKAGMLAEAESYLKRMPQH-------CAPNVVSYNIIIDGYCKARNIEKALAFLREMEE 126

Query: 222 RGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINE 281
            G  P     ++++  FC  GN  +   +F EM   G  P+++ FNV++  L +  KI+E
Sbjct: 127 LGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSGLWRARKIHE 186

Query: 282 ANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILIN 341
           A  L   M  RG  PD  TYN+++ G C   ++D A  +   M  +    T V+Y  LI+
Sbjct: 187 ARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSPTFVTYTTLID 246

Query: 342 GYCKILNVEEAMSLYRQIISNGVRQTVITYNTLL--SGLFQAGQAGYAQKLFDEMKLYNV 399
             CK   +++A  ++ ++       T   Y+ L+  +GL +A + G A+++F EM+   +
Sbjct: 247 HLCKFARLQQAYEVFEKMAEGPCPCTEPAYSVLILINGLCKARRPGEAKEMFQEMRGRGI 306

Query: 400 EPDLSTYNILIDGLCKNNCVQEAVKL-FHMLEM----NKFEFGIEIFNCLIDGLCKAGRL 454
            P + TYN L++GL     +Q+A++L + ML+     N F + I     LI  LCK  ++
Sbjct: 307 SPTVVTYNTLLEGLLSTAKLQDAMELTYFMLDQVPAPNMFTYEI-----LISSLCKTDQV 361

Query: 455 DNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTL 514
           + A++L   +  KG VP++  + +++  L R G+L+ A +    M +  C   V + N L
Sbjct: 362 EEAFKLLSAMRDKGFVPSLKIWEVLLSRLARAGRLDDAFELYKEMSRINCQQLVGSSNIL 421

Query: 515 MHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVV 552
           + G L+     +  + L +M +    +VPD  T+  +V
Sbjct: 422 LDGILRRGSVDEAKDFLKQMTDT--GIVPDKFTYDKLV 457



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 120/366 (32%), Positives = 189/366 (51%), Gaps = 5/366 (1%)

Query: 200 IDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGP 259
           I  L +  LV +A+ +  EMK  G +P V     LI GF  +G+++        ML+ G 
Sbjct: 1   IRKLVEADLVAQAEAIVEEMKYAGFSPDVQSHCLLIRGFFKSGSFQRGCSQLDRMLEAGL 60

Query: 260 RPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTARE 319
            PN + +N +I CLCK G + EA   L+ M Q    P+  +YN ++DGYC    I+ A  
Sbjct: 61  FPNAILYNNLISCLCKAGMLAEAESYLKRMPQH-CAPNVVSYNIIIDGYCKARNIEKALA 119

Query: 320 IFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLF 379
               M   G   T  +Y+ ++  +CK  NV +AM ++ ++ + G    ++ +N LLSGL+
Sbjct: 120 FLREMEELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSGLW 179

Query: 380 QAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIE 439
           +A +   A++LF  M     +PD+ TYN +I GLCK   + EAV L   ++         
Sbjct: 180 RARKIHEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSPTFV 239

Query: 440 IFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYS--IMIHGLCRKGKLEKANDFLL 497
            +  LID LCK  RL  A+E+F K+ +     T   YS  I+I+GLC+  +  +A +   
Sbjct: 240 TYTTLIDHLCKFARLQQAYEVFEKMAEGPCPCTEPAYSVLILINGLCKARRPGEAKEMFQ 299

Query: 498 YMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAK 557
            M   G +P VVT+NTL+ G L   K    +EL + M   ++   P+  T+ I++  L K
Sbjct: 300 EMRGRGISPTVVTYNTLLEGLLSTAKLQDAMELTYFML--DQVPAPNMFTYEILISSLCK 357

Query: 558 DEKYHE 563
            ++  E
Sbjct: 358 TDQVEE 363



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 119/436 (27%), Positives = 212/436 (48%), Gaps = 48/436 (11%)

Query: 125 RGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVAL-RLHKKMVSGDY 183
           R L   + + +A  + + M   G  PDV ++  LI GF ++G+      +L + + +G +
Sbjct: 2   RKLVEADLVAQAEAIVEEMKYAGFSPDVQSHCLLIRGFFKSGSFQRGCSQLDRMLEAGLF 61

Query: 184 ENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGN 243
            N ++       Y+ +I  LCK G++ +A+     M                    CA  
Sbjct: 62  PNAIL-------YNNLISCLCKAGMLAEAESYLKRMPQH-----------------CA-- 95

Query: 244 WEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNS 303
                            PN++++N++ID  CK   I +A   L  M + G  P    Y+S
Sbjct: 96  -----------------PNVVSYNIIIDGYCKARNIEKALAFLREMEELGHPPTPHAYSS 138

Query: 304 LMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNG 363
           ++  +C  G +  A ++F  M +KGC+  +V++N+L++G  +   + EA  L+R + S G
Sbjct: 139 IVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSGLWRARKIHEARELFRSMNSRG 198

Query: 364 VRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAV 423
            +  V+TYNT+++GL +  +   A  L + MK  +V P   TY  LID LCK   +Q+A 
Sbjct: 199 CKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSPTFVTYTTLIDHLCKFARLQQAY 258

Query: 424 KLFHMLEMNKFEFGIEIFNC--LIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIH 481
           ++F  +           ++   LI+GLCKA R   A E+F ++  +G+ PTVVTY+ ++ 
Sbjct: 259 EVFEKMAEGPCPCTEPAYSVLILINGLCKARRPGEAKEMFQEMRGRGISPTVVTYNTLLE 318

Query: 482 GLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNL 541
           GL    KL+ A +   +M     APN+ T+  L+    + ++  +  +LL  M   ++  
Sbjct: 319 GLLSTAKLQDAMELTYFMLDQVPAPNMFTYEILISSLCKTDQVEEAFKLLSAMR--DKGF 376

Query: 542 VPDDTTFSIVVDLLAK 557
           VP    + +++  LA+
Sbjct: 377 VPSLKIWEVLLSRLAR 392



 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 115/368 (31%), Positives = 178/368 (48%), Gaps = 15/368 (4%)

Query: 29  RQIAAVSSPET--QLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVA 86
           R++  +  P T    +  +   CK+G  N+++A   F  M      P I +FN+L   + 
Sbjct: 122 REMEELGHPPTPHAYSSIVQSFCKTG--NVSKAMDVFAEMPAKGCEPDIVNFNVLLSGLW 179

Query: 87  KNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAF 146
           + R        +R + S G  PD +T N +I        GLC   ++ EA +L + M   
Sbjct: 180 RARKIHEARELFRSMNSRGCKPDVVTYNTMIA-------GLCKWKKLDEAVFLLERMKQE 232

Query: 147 GVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKE 206
            V P  +TY TLI+  C+   L  A  + +KM  G            +S  I+I+ LCK 
Sbjct: 233 DVSPTFVTYTTLIDHLCKFARLQQAYEVFEKMAEGPCP----CTEPAYSVLILINGLCKA 288

Query: 207 GLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTF 266
               +AKE+F EM+GRGI+P VV   TL+ G       ++   L   MLD  P PN+ T+
Sbjct: 289 RRPGEAKEMFQEMRGRGISPTVVTYNTLLEGLLSTAKLQDAMELTYFMLDQVPAPNMFTY 348

Query: 267 NVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHS 326
            ++I  LCK  ++ EA  LL  M  +G  P    +  L+      GR+D A E++  M  
Sbjct: 349 EILISSLCKTDQVEEAFKLLSAMRDKGFVPSLKIWEVLLSRLARAGRLDDAFELYKEMSR 408

Query: 327 KGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGY 386
             C+  V S NIL++G  +  +V+EA    +Q+   G+     TY+ L+ GL   G+A  
Sbjct: 409 INCQQLVGSSNILLDGILRRGSVDEAKDFLKQMTDTGIVPDKFTYDKLVVGLCWQGKADQ 468

Query: 387 AQKLFDEM 394
           A+KL +E+
Sbjct: 469 ARKLVEEL 476


>gi|302785473|ref|XP_002974508.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
 gi|300158106|gb|EFJ24730.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
          Length = 567

 Score =  241 bits (616), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 153/495 (30%), Positives = 252/495 (50%), Gaps = 32/495 (6%)

Query: 75  ISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIK 134
           + ++N L   + +   +D   + +++++     PD  T  IL+       RGLC  N+++
Sbjct: 7   VFTYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILL-------RGLCRSNQLE 59

Query: 135 EATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIF 194
           +A  L   M   G  PD   Y  LI+G+ +  +   A +   +MV    +N  +    + 
Sbjct: 60  KARKLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMV----KNHCLP--TVV 113

Query: 195 SYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEM 254
           +Y+ I+D LCK      A +L  EM+ +G +P +     ++ G C     +E   +  EM
Sbjct: 114 TYTNIVDGLCKAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEM 173

Query: 255 LDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRI 314
              G  P+++T+N  I  LCK  +++EA   L  M    + PD  +Y ++++G C  G +
Sbjct: 174 AVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARM---PVTPDVVSYTTVINGLCKSGDL 230

Query: 315 DTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTL 374
           D+A  +   M ++GC   VV+Y+ LI+G+CK   VE AM L   ++  G R  ++ YN+L
Sbjct: 231 DSASRMLDHMSNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSL 290

Query: 375 LSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLF-HMLEM-- 431
           L  L + G  G A+ +  EM+     PD+ +YN  IDGLCK   V++A  +F  M+E   
Sbjct: 291 LGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGC 350

Query: 432 --NKFEFG-----IEIFNCLIDGLCKAGRLDNAWELFHK-LPQKGLVPTVVTYSIMIHGL 483
             N   +      I ++  L+DGLCK GR D A  LF K L +K   P V  Y++M+   
Sbjct: 351 TPNASSYSMLIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSH 410

Query: 484 CRKGKLEKANDFLLYM-EKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLV 542
           C++ +++KA      M EKN C  NVVT+N L+HG   +++ S    +L  M   +   +
Sbjct: 411 CKRRQIDKALQIHKQMLEKNCC--NVVTWNILVHGLCVDDRLSDAETMLLTMV--DEGFI 466

Query: 543 PDDTTFSIVVDLLAK 557
           PD  T+  +VD + K
Sbjct: 467 PDFVTYGTLVDAMCK 481



 Score =  238 bits (606), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 148/515 (28%), Positives = 252/515 (48%), Gaps = 34/515 (6%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           C+S    L +AR   G M  M   P  + +N L    +K + +     F  ++V    LP
Sbjct: 53  CRSN--QLEKARKLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLP 110

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
             +T   +++       GLC   R ++A  L   M   G  P++ TY  ++ G C    L
Sbjct: 111 TVVTYTNIVD-------GLCKAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKL 163

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
             A ++ ++M    Y        ++ +Y+  I  LCK   VD+A++    M    + P V
Sbjct: 164 DEAKKMLEEMAVRGY------FPDVVTYNSFIKGLCKCDRVDEARKFLARMP---VTPDV 214

Query: 229 VVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLEL 288
           V  TT+I+G C +G+ +  + +   M + G  P+++T++ +ID  CKGG++  A GLL+ 
Sbjct: 215 VSYTTVINGLCKSGDLDSASRMLDHMSNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDS 274

Query: 289 MIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILN 348
           M++ G  P+   YNSL+     +G I  A ++ + M  +G    VVSYN  I+G CK   
Sbjct: 275 MLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAER 334

Query: 349 VEEAMSLYRQIISNGVRQT----------VITYNTLLSGLFQAGQAGYAQKLFDEMKLYN 398
           V++A +++ +++  G              ++ Y  LL GL + G+   A  LF ++    
Sbjct: 335 VKKAKAVFDRMVERGCTPNASSYSMLIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEK 394

Query: 399 V-EPDLSTYNILIDGLCKNNCVQEAVKLF-HMLEMNKFEFGIEIFNCLIDGLCKAGRLDN 456
           + EPD+  YN+++D  CK   + +A+++   MLE N     +  +N L+ GLC   RL +
Sbjct: 395 ICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLEKNCC--NVVTWNILVHGLCVDDRLSD 452

Query: 457 AWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMH 516
           A  +   +  +G +P  VTY  ++  +C+ GK   A +      K GC P+VVT++ L+ 
Sbjct: 453 AETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALIT 512

Query: 517 GFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIV 551
           G +  N   +   L  K+   ER  VPDD T  ++
Sbjct: 513 GLVHENMAEEAYLLFTKLV--ERRWVPDDKTLGLL 545



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 101/323 (31%), Positives = 168/323 (52%), Gaps = 5/323 (1%)

Query: 245 EEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSL 304
           ++ + +F EM+D   +P+  TF +++  LC+  ++ +A  LL  M + G  PD   YN+L
Sbjct: 24  DKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKARKLLGRMKEMGCVPDDAIYNAL 83

Query: 305 MDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGV 364
           + GY        A +    M    C  TVV+Y  +++G CK     +A+ L  ++   G 
Sbjct: 84  ISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAERTRDAVKLLDEMRDKGC 143

Query: 365 RQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVK 424
              + TYN ++ GL +  +   A+K+ +EM +    PD+ TYN  I GLCK + V EA K
Sbjct: 144 SPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARK 203

Query: 425 LFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLC 484
               + +      +  +  +I+GLCK+G LD+A  +   +  +G  P VVTYS +I G C
Sbjct: 204 FLARMPVTP---DVVSYTTVINGLCKSGDLDSASRMLDHMSNRGCTPDVVTYSSLIDGFC 260

Query: 485 RKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPD 544
           + G++E+A   L  M K GC PN+V +N+L+    +     K  ++L +M    R   PD
Sbjct: 261 KGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEM--ERRGFTPD 318

Query: 545 DTTFSIVVDLLAKDEKYHECSAV 567
             +++  +D L K E+  +  AV
Sbjct: 319 VVSYNACIDGLCKAERVKKAKAV 341



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 101/365 (27%), Positives = 180/365 (49%), Gaps = 6/365 (1%)

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
           N+F+Y+ ++  L +E   DKA  +F EM  +   P       L+ G C +   E+   L 
Sbjct: 6   NVFTYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKARKLL 65

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
             M ++G  P+   +N +I    K     +A   L  M++    P   TY +++DG C  
Sbjct: 66  GRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKA 125

Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
            R   A ++   M  KGC   + +YN+++ G C+   ++EA  +  ++   G    V+TY
Sbjct: 126 ERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTY 185

Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
           N+ + GL +  +   A+K    M    V PD+ +Y  +I+GLCK+  +  A ++   +  
Sbjct: 186 NSFIKGLCKCDRVDEARKFLARMP---VTPDVVSYTTVINGLCKSGDLDSASRMLDHMSN 242

Query: 432 NKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEK 491
                 +  ++ LIDG CK G ++ A  L   + + G  P +V Y+ ++  L R G + K
Sbjct: 243 RGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGK 302

Query: 492 ANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFS-I 550
           A D L+ ME+ G  P+VV++N  + G  +  +  K   +  +M   ER   P+ +++S +
Sbjct: 303 AEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMV--ERGCTPNASSYSML 360

Query: 551 VVDLL 555
           +VD+L
Sbjct: 361 IVDIL 365



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 87/278 (31%), Positives = 155/278 (55%), Gaps = 3/278 (1%)

Query: 257 LGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDT 316
           +G   N+ T+N ++  L +  + ++A+ + + MI +   PD FT+  L+ G C   +++ 
Sbjct: 1   MGYEHNVFTYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEK 60

Query: 317 AREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLS 376
           AR++   M   GC      YN LI+GY K  +  +A     +++ N    TV+TY  ++ 
Sbjct: 61  ARKLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVD 120

Query: 377 GLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEF 436
           GL +A +   A KL DEM+     P++ TYN++++GLC+   + EA K+   + +  +  
Sbjct: 121 GLCKAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFP 180

Query: 437 GIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFL 496
            +  +N  I GLCK  R+D A +   ++P   + P VV+Y+ +I+GLC+ G L+ A+  L
Sbjct: 181 DVVTYNSFIKGLCKCDRVDEARKFLARMP---VTPDVVSYTTVINGLCKSGDLDSASRML 237

Query: 497 LYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKM 534
            +M   GC P+VVT+++L+ GF +  +  + + LL  M
Sbjct: 238 DHMSNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSM 275



 Score = 69.3 bits (168), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 37/130 (28%), Positives = 68/130 (52%), Gaps = 2/130 (1%)

Query: 434 FEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKAN 493
           +E  +  +N L+  L +  R D A  +F ++  K   P   T++I++ GLCR  +LEKA 
Sbjct: 3   YEHNVFTYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKAR 62

Query: 494 DFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
             L  M++ GC P+   +N L+ G+ +     +  + L +M   + + +P   T++ +VD
Sbjct: 63  KLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMV--KNHCLPTVVTYTNIVD 120

Query: 554 LLAKDEKYHE 563
            L K E+  +
Sbjct: 121 GLCKAERTRD 130



 Score = 45.1 bits (105), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 26/94 (27%), Positives = 47/94 (50%), Gaps = 2/94 (2%)

Query: 468 GLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKV 527
           G    V TY+ ++  L R+ + +KA+     M    C P+  TF  L+ G  ++N+  K 
Sbjct: 2   GYEHNVFTYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKA 61

Query: 528 VELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKY 561
            +LL +M   E   VPDD  ++ ++   +K + +
Sbjct: 62  RKLLGRM--KEMGCVPDDAIYNALISGYSKAKDF 93


>gi|226528493|ref|NP_001147073.1| ATP binding protein [Zea mays]
 gi|195607078|gb|ACG25369.1| ATP binding protein [Zea mays]
          Length = 655

 Score =  241 bits (616), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 141/460 (30%), Positives = 232/460 (50%), Gaps = 13/460 (2%)

Query: 75  ISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIK 134
           + + NL+  A+      D  +   R L S G  PD ++ N ++       +GLC+  R  
Sbjct: 192 VGNCNLVLNAICDQGSVDKALHLLRDLPSFGCEPDVVSYNAVL-------KGLCMAKRWG 244

Query: 135 EATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIF 194
               L + M+     P+++T+ TLI+  CR G      R+H+ +++   E+G     +I 
Sbjct: 245 CVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFE---RVHE-VLAQMAEHG--CTPDIR 298

Query: 195 SYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEM 254
            Y+ IID +CKEG +  A E+   M   G+ P VV   TL+ G C A  WEE   L  EM
Sbjct: 299 MYATIIDGICKEGHLKVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEM 358

Query: 255 LDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRI 314
            D     + +TFN+++D  C+ G ++    LLE M+  G  PD  TY ++++G+C  G I
Sbjct: 359 FDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLVHGCMPDVITYTTVINGFCKEGLI 418

Query: 315 DTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTL 374
           D A  +  SM + GCK   +SY I++ G C      +A  L  Q+I  G     IT+NTL
Sbjct: 419 DEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTL 478

Query: 375 LSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKF 434
           ++ L + G    A +L  +M +    PDL +Y+ +IDGL K     EA++L +++     
Sbjct: 479 INFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGM 538

Query: 435 EFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKAND 494
                I++ +   L + GR++   ++F  +    +    V Y+ +I  LC++G+ E+A +
Sbjct: 539 SPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIE 598

Query: 495 FLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKM 534
           FL YM  +GC PN  T+  L+ G        +  E+L ++
Sbjct: 599 FLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEMLTEL 638



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 127/443 (28%), Positives = 217/443 (48%), Gaps = 16/443 (3%)

Query: 125 RGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALR----LHKKMVS 180
           R LC   RI +A  +   M   G  P    Y  ++   CR G    A+R    LH +  +
Sbjct: 130 RALCARGRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCA 189

Query: 181 GDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCC 240
            D  N           +++++++C +G VDKA  L  ++   G  P VV    ++ G C 
Sbjct: 190 LDVGN----------CNLVLNAICDQGSVDKALHLLRDLPSFGCEPDVVSYNAVLKGLCM 239

Query: 241 AGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFT 300
           A  W  V  L  EM+ +   PN++TFN +I  LC+ G     + +L  M + G  PD   
Sbjct: 240 AKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMAEHGCTPDIRM 299

Query: 301 YNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQII 360
           Y +++DG C  G +  A EI   M S G K  VV YN L+ G C     EE   L  ++ 
Sbjct: 300 YATIIDGICKEGHLKVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMF 359

Query: 361 SNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQ 420
                   +T+N L+    Q G      +L ++M ++   PD+ TY  +I+G CK   + 
Sbjct: 360 DKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLVHGCMPDVITYTTVINGFCKEGLID 419

Query: 421 EAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMI 480
           EAV L   +     +     +  ++ GLC A R  +A +L  ++ Q+G     +T++ +I
Sbjct: 420 EAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLI 479

Query: 481 HGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERN 540
           + LC+KG +E+A + L  M  NGC+P++++++T++ G  +  KT + +ELL+ M    + 
Sbjct: 480 NFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMV--NKG 537

Query: 541 LVPDDTTFSIVVDLLAKDEKYHE 563
           + P+   +S +   L+++ + ++
Sbjct: 538 MSPNTIIYSSIASALSREGRINK 560



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 114/438 (26%), Positives = 206/438 (47%), Gaps = 11/438 (2%)

Query: 126 GLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYEN 185
           G C   +++ A  L     A  V P+  TY  ++   C  G ++ AL +  +M       
Sbjct: 99  GYCRAGQLESARRLAA---AVPVPPNAYTYFPVVRALCARGRIADALAVLDEMP----RR 151

Query: 186 GLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWE 245
           G      +  Y +I+++ C+ G    A  +  ++  RG    V  C  +++  C  G+ +
Sbjct: 152 GCAPIPPM--YHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVD 209

Query: 246 EVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLM 305
           +   L  ++   G  P+++++N ++  LC   +      L+E M++    P+  T+N+L+
Sbjct: 210 KALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLI 269

Query: 306 DGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVR 365
              C  G  +   E+   M   GC   +  Y  +I+G CK  +++ A  +  ++ S G++
Sbjct: 270 SYLCRNGLFERVHEVLAQMAEHGCTPDIRMYATIIDGICKEGHLKVAHEILNRMPSYGLK 329

Query: 366 QTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKL 425
             V+ YNTLL GL  A +    ++L  EM   +   D  T+NIL+D  C+N  V   ++L
Sbjct: 330 PNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIEL 389

Query: 426 FHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCR 485
              + ++     +  +  +I+G CK G +D A  L   +   G  P  ++Y+I++ GLC 
Sbjct: 390 LEQMLVHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCS 449

Query: 486 KGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDD 545
             +   A D +  M + GC  N +TFNTL++   +     + +ELL +M        PD 
Sbjct: 450 AERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQML--VNGCSPDL 507

Query: 546 TTFSIVVDLLAKDEKYHE 563
            ++S V+D L K  K  E
Sbjct: 508 ISYSTVIDGLGKAGKTDE 525


>gi|326500244|dbj|BAK06211.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 600

 Score =  241 bits (616), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 153/532 (28%), Positives = 263/532 (49%), Gaps = 23/532 (4%)

Query: 19  VKLSSLFKSPRQIAAVSSPETQL--NEFLHENCKSGIINLNEARYFFGYMTH---MQPSP 73
           ++L  L +SP  ++A+ S    +  N  L   C+ G   L+ A +    M+H   +   P
Sbjct: 35  LRLLPLPESPALLSALPSVRDAVSYNTVLAALCRQGC--LDAALFLLRVMSHEPRLASRP 92

Query: 74  PISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRI 133
              S+  L  A+  +R     +   R +   G+ PD +T   LI       RGLC    +
Sbjct: 93  NAISYTTLMRALCADRRAAQAVGLLRSMQDCGVRPDVVTYGTLI-------RGLCDAADV 145

Query: 134 KEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNI 193
             A  L   M   G+ P+V+ Y  L++G+C+TG      ++ ++M      +G   + ++
Sbjct: 146 DTAVELLNEMCESGIEPNVVVYSCLLHGYCKTGRWESVGKVFEEM------SGRGIEPDV 199

Query: 194 FSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIE 253
             Y+ +IDSLC+ G V KA  +   M  RG+ P VV    LI+  C  G+  E   L   
Sbjct: 200 VMYTALIDSLCRHGKVKKAARVMDMMTERGLEPNVVTYNVLINSMCKEGSVREALDLRKN 259

Query: 254 MLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQ--RGLNPDRFTYNSLMDGYCLV 311
           M + G +P+++T+N +I  L    +++EA  LLE M+Q    + PD  T+NS++ G C +
Sbjct: 260 MSEKGVQPDVVTYNTLITGLSSVLEMDEAMALLEEMMQGETRVRPDLMTFNSVIHGLCKI 319

Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
           G +  A ++   M   GC+  +V++N+LI G  ++  V++AM L  ++ S+G++    TY
Sbjct: 320 GWMRQALQVRAMMAENGCRCNLVAFNLLIGGLLRVHKVKKAMELMDEMASSGLQPDSFTY 379

Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
           + L++G  +  Q   A+    EM+   +EP+   Y  L+  +C    + +A  LF+ ++ 
Sbjct: 380 SILINGFCKMRQVERAESYLSEMRHQGMEPEPVHYIPLLKAMCDQGMMGQARDLFNEMDR 439

Query: 432 NKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEK 491
           N  +     ++ +I G  K+G    A E    +  +GL+P  VTYSI I+   + G L  
Sbjct: 440 N-CKLDAAAYSTMIHGAFKSGEKKIAEEFLKDMIDEGLIPDAVTYSIPINMFAKSGDLAA 498

Query: 492 ANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVP 543
           A   L  M  +G  P+V  F++L+ G+     T K++EL  +M   +  L P
Sbjct: 499 AERVLKQMTASGFVPDVAVFDSLIQGYGAKGDTEKILELTREMTAKDVALDP 550



 Score =  223 bits (568), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 129/437 (29%), Positives = 232/437 (53%), Gaps = 14/437 (3%)

Query: 126 GLCVENRIKEATWLFKNMI---AFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGD 182
            LC +  +  A +L + M        RP+ I+Y TL+   C     + A+ L + M    
Sbjct: 65  ALCRQGCLDAALFLLRVMSHEPRLASRPNAISYTTLMRALCADRRAAQAVGLLRSM---- 120

Query: 183 YENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAG 242
            + G+  + ++ +Y  +I  LC    VD A EL  EM   GI P VVV + L+HG+C  G
Sbjct: 121 QDCGV--RPDVVTYGTLIRGLCDAADVDTAVELLNEMCESGIEPNVVVYSCLLHGYCKTG 178

Query: 243 NWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYN 302
            WE V  +F EM   G  P+++ +  +ID LC+ GK+ +A  ++++M +RGL P+  TYN
Sbjct: 179 RWESVGKVFEEMSGRGIEPDVVMYTALIDSLCRHGKVKKAARVMDMMTERGLEPNVVTYN 238

Query: 303 SLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIIS- 361
            L++  C  G +  A ++  +M  KG +  VV+YN LI G   +L ++EAM+L  +++  
Sbjct: 239 VLINSMCKEGSVREALDLRKNMSEKGVQPDVVTYNTLITGLSSVLEMDEAMALLEEMMQG 298

Query: 362 -NGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQ 420
              VR  ++T+N+++ GL + G    A ++   M       +L  +N+LI GL + + V+
Sbjct: 299 ETRVRPDLMTFNSVIHGLCKIGWMRQALQVRAMMAENGCRCNLVAFNLLIGGLLRVHKVK 358

Query: 421 EAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMI 480
           +A++L   +  +  +     ++ LI+G CK  +++ A     ++  +G+ P  V Y  ++
Sbjct: 359 KAMELMDEMASSGLQPDSFTYSILINGFCKMRQVERAESYLSEMRHQGMEPEPVHYIPLL 418

Query: 481 HGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERN 540
             +C +G + +A D    M++N C  +   ++T++HG  ++ +     E L  M   +  
Sbjct: 419 KAMCDQGMMGQARDLFNEMDRN-CKLDAAAYSTMIHGAFKSGEKKIAEEFLKDMI--DEG 475

Query: 541 LVPDDTTFSIVVDLLAK 557
           L+PD  T+SI +++ AK
Sbjct: 476 LIPDAVTYSIPINMFAK 492



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 80/264 (30%), Positives = 136/264 (51%), Gaps = 3/264 (1%)

Query: 297 DRFTYNSLMDGYCLVGRIDTAREIFLSMHSK---GCKHTVVSYNILINGYCKILNVEEAM 353
           D  +YN+++   C  G +D A  +   M  +     +   +SY  L+   C      +A+
Sbjct: 55  DAVSYNTVLAALCRQGCLDAALFLLRVMSHEPRLASRPNAISYTTLMRALCADRRAAQAV 114

Query: 354 SLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGL 413
            L R +   GVR  V+TY TL+ GL  A     A +L +EM    +EP++  Y+ L+ G 
Sbjct: 115 GLLRSMQDCGVRPDVVTYGTLIRGLCDAADVDTAVELLNEMCESGIEPNVVVYSCLLHGY 174

Query: 414 CKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTV 473
           CK    +   K+F  +     E  + ++  LID LC+ G++  A  +   + ++GL P V
Sbjct: 175 CKTGRWESVGKVFEEMSGRGIEPDVVMYTALIDSLCRHGKVKKAARVMDMMTERGLEPNV 234

Query: 474 VTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHK 533
           VTY+++I+ +C++G + +A D    M + G  P+VVT+NTL+ G     +  + + LL +
Sbjct: 235 VTYNVLINSMCKEGSVREALDLRKNMSEKGVQPDVVTYNTLITGLSSVLEMDEAMALLEE 294

Query: 534 MAEPERNLVPDDTTFSIVVDLLAK 557
           M + E  + PD  TF+ V+  L K
Sbjct: 295 MMQGETRVRPDLMTFNSVIHGLCK 318



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 93/383 (24%), Positives = 165/383 (43%), Gaps = 44/383 (11%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           C+ G   + +A      MT     P + ++N+L  ++ K       +   + +   G+ P
Sbjct: 210 CRHG--KVKKAARVMDMMTERGLEPNVVTYNVLINSMCKEGSVREALDLRKNMSEKGVQP 267

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIA--FGVRPDVITYGTLINGFCRTG 166
           D +T N LI        GL     + EA  L + M+     VRPD++T+ ++I+G C+ G
Sbjct: 268 DVVTYNTLIT-------GLSSVLEMDEAMALLEEMMQGETRVRPDLMTFNSVIHGLCKIG 320

Query: 167 NLSVAL--------------------------RLHKKMVSGDYENGLIS---KTNIFSYS 197
            +  AL                          R+HK   + +  + + S   + + F+YS
Sbjct: 321 WMRQALQVRAMMAENGCRCNLVAFNLLIGGLLRVHKVKKAMELMDEMASSGLQPDSFTYS 380

Query: 198 IIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDL 257
           I+I+  CK   V++A+    EM+ +G+ P  V    L+   C  G   +   LF EM D 
Sbjct: 381 ILINGFCKMRQVERAESYLSEMRHQGMEPEPVHYIPLLKAMCDQGMMGQARDLFNEM-DR 439

Query: 258 GPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTA 317
             + +   ++ MI    K G+   A   L+ MI  GL PD  TY+  ++ +   G +  A
Sbjct: 440 NCKLDAAAYSTMIHGAFKSGEKKIAEEFLKDMIDEGLIPDAVTYSIPINMFAKSGDLAAA 499

Query: 318 REIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSG 377
             +   M + G    V  ++ LI GY    + E+ + L R++ +  V       +T+++ 
Sbjct: 500 ERVLKQMTASGFVPDVAVFDSLIQGYGAKGDTEKILELTREMTAKDVALDPKIISTIVTS 559

Query: 378 LFQAGQAGYAQKLFDEMKLYNVE 400
           L   G +   QKL   +  ++ E
Sbjct: 560 L---GASIEGQKLLQSLPGFDTE 579


>gi|224086515|ref|XP_002307901.1| predicted protein [Populus trichocarpa]
 gi|222853877|gb|EEE91424.1| predicted protein [Populus trichocarpa]
          Length = 724

 Score =  241 bits (616), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 146/488 (29%), Positives = 247/488 (50%), Gaps = 20/488 (4%)

Query: 66  MTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKER 125
           MT     P    +  L  A++K    D  +    ++  +G  PD  T N +I        
Sbjct: 236 MTKHGCVPNSMIYQTLIDALSKRDRVDEALKLLEEMFLMGCPPDVNTFNTVI-------Y 288

Query: 126 GLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYEN 185
           G C  NR+ E   L   MI  G  P+ +TYG L++G C+T  +  A  L  K        
Sbjct: 289 GFCRLNRVLEGAKLVDRMILKGFTPNDMTYGYLMHGLCKTCRIDEAQALLSK-------- 340

Query: 186 GLISKTNIFSYSIIIDSLCKEGLVDKAKE-LFLEMKGRGINPAVVVCTTLIHGFCCAGNW 244
             +   N+  ++ +++   + G +++A   ++ +M   G  P V   +TL++G C  G +
Sbjct: 341 --VPGPNVVHFNTLVNGFVRNGRLNEATAFVYDKMINNGYVPDVFTFSTLVNGLCKKGLF 398

Query: 245 EEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSL 304
                L  +M   G +PNL T+ ++ID  CK G++ EA  +L  M+ +G + +   YN+L
Sbjct: 399 GSALELVNDMDAKGCKPNLNTYTILIDGFCKKGQLEEAGLILREMLTKGFSLNTVGYNAL 458

Query: 305 MDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGV 364
           +   C  G+I  A ++F  M SKGCK  + ++N LI G C++  +E+A++LYR ++  GV
Sbjct: 459 ISALCKHGKIHEALDMFGEMSSKGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMVLEGV 518

Query: 365 RQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVK 424
               +T+NTL+    + G+   A KL ++M       D  TYN LI  LCK   V++ + 
Sbjct: 519 IANSVTFNTLIHAFLRRGEIQEALKLVNDMLFRGCPLDEITYNGLIKALCKTGAVEKGLG 578

Query: 425 LFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLC 484
           LF  +        I   N LI+G C AG++ NA E    +  +G  P +VTY+ +I+GLC
Sbjct: 579 LFEEMIRKGLTPSIITCNILINGFCTAGKVHNALEFMRDMIHRGFSPDIVTYNSLINGLC 638

Query: 485 RKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPD 544
           ++G++++A +    ++  G  P+ +T+NTL+    +         LL++    E   VP+
Sbjct: 639 KRGRIQEALNLFEKLQAEGIQPDSITYNTLICWLCREGAFDDACFLLYRGV--ENGFVPN 696

Query: 545 DTTFSIVV 552
           D T++I+V
Sbjct: 697 DVTWNILV 704



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 118/367 (32%), Positives = 193/367 (52%), Gaps = 7/367 (1%)

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
           N +++ +++ +LC    VD A  L  +M   G  P  ++  TLI         +E   L 
Sbjct: 209 NDYTFGLVMKALCMVNEVDNACLLLRDMTKHGCVPNSMIYQTLIDALSKRDRVDEALKLL 268

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
            EM  +G  P++ TFN +I   C+  ++ E   L++ MI +G  P+  TY  LM G C  
Sbjct: 269 EEMFLMGCPPDVNTFNTVIYGFCRLNRVLEGAKLVDRMILKGFTPNDMTYGYLMHGLCKT 328

Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMS-LYRQIISNGVRQTVIT 370
            RID A+ +     SK     VV +N L+NG+ +   + EA + +Y ++I+NG    V T
Sbjct: 329 CRIDEAQALL----SKVPGPNVVHFNTLVNGFVRNGRLNEATAFVYDKMINNGYVPDVFT 384

Query: 371 YNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLE 430
           ++TL++GL + G  G A +L ++M     +P+L+TY ILIDG CK   ++EA  +   + 
Sbjct: 385 FSTLVNGLCKKGLFGSALELVNDMDAKGCKPNLNTYTILIDGFCKKGQLEEAGLILREML 444

Query: 431 MNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLE 490
              F      +N LI  LCK G++  A ++F ++  KG  P + T++ +I GLCR  ++E
Sbjct: 445 TKGFSLNTVGYNALISALCKHGKIHEALDMFGEMSSKGCKPDIFTFNSLIFGLCRVDEME 504

Query: 491 KANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSI 550
            A      M   G   N VTFNTL+H FL+  +  + ++L++ M    R    D+ T++ 
Sbjct: 505 DALALYRDMVLEGVIANSVTFNTLIHAFLRRGEIQEALKLVNDML--FRGCPLDEITYNG 562

Query: 551 VVDLLAK 557
           ++  L K
Sbjct: 563 LIKALCK 569



 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 97/310 (31%), Positives = 149/310 (48%), Gaps = 15/310 (4%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CK G   L EA      M     S     +N L  A+ K+      +  + ++ S G  P
Sbjct: 428 CKKG--QLEEAGLILREMLTKGFSLNTVGYNALISALCKHGKIHEALDMFGEMSSKGCKP 485

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           D  T N LI        GLC  + +++A  L+++M+  GV  + +T+ TLI+ F R G +
Sbjct: 486 DIFTFNSLI-------FGLCRVDEMEDALALYRDMVLEGVIANSVTFNTLIHAFLRRGEI 538

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
             AL+L   M+            +  +Y+ +I +LCK G V+K   LF EM  +G+ P++
Sbjct: 539 QEALKLVNDMLFRG------CPLDEITYNGLIKALCKTGAVEKGLGLFEEMIRKGLTPSI 592

Query: 229 VVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLEL 288
           + C  LI+GFC AG          +M+  G  P+++T+N +I+ LCK G+I EA  L E 
Sbjct: 593 ITCNILINGFCTAGKVHNALEFMRDMIHRGFSPDIVTYNSLINGLCKRGRIQEALNLFEK 652

Query: 289 MIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILN 348
           +   G+ PD  TYN+L+   C  G  D A  +       G     V++NIL+  + K  N
Sbjct: 653 LQAEGIQPDSITYNTLICWLCREGAFDDACFLLYRGVENGFVPNDVTWNILVYNFGKQSN 712

Query: 349 VEEAMSLYRQ 358
            E     Y Q
Sbjct: 713 SEGQTITYAQ 722



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 101/370 (27%), Positives = 176/370 (47%), Gaps = 8/370 (2%)

Query: 196 YSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEML 255
           Y ++ID L           L L+MK  GI     +   ++  +  AG   +   L ++M 
Sbjct: 107 YYLLIDKLGAAAGFKVIDRLLLQMKEEGIVFRESLFILIMKYYGRAGLPGQATRLLLDMK 166

Query: 256 DL-GPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRI 314
            +    P+  ++NV++D L  G   + A+ +   M+ +G++P+ +T+  +M   C+V  +
Sbjct: 167 GVYCCEPSFRSYNVVLDVLVVGNCPSVASNVFYDMLSKGVSPNDYTFGLVMKALCMVNEV 226

Query: 315 DTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTL 374
           D A  +   M   GC    + Y  LI+   K   V+EA+ L  ++   G    V T+NT+
Sbjct: 227 DNACLLLRDMTKHGCVPNSMIYQTLIDALSKRDRVDEALKLLEEMFLMGCPPDVNTFNTV 286

Query: 375 LSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKF 434
           + G  +  +     KL D M L    P+  TY  L+ GLCK   + EA  L   +     
Sbjct: 287 IYGFCRLNRVLEGAKLVDRMILKGFTPNDMTYGYLMHGLCKTCRIDEAQALLSKVPGPN- 345

Query: 435 EFGIEIFNCLIDGLCKAGRLDNAWE-LFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKAN 493
              +  FN L++G  + GRL+ A   ++ K+   G VP V T+S +++GLC+KG    A 
Sbjct: 346 ---VVHFNTLVNGFVRNGRLNEATAFVYDKMINNGYVPDVFTFSTLVNGLCKKGLFGSAL 402

Query: 494 DFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
           + +  M+  GC PN+ T+  L+ GF +  +  +   +L +M     +L  +   ++ ++ 
Sbjct: 403 ELVNDMDAKGCKPNLNTYTILIDGFCKKGQLEEAGLILREMLTKGFSL--NTVGYNALIS 460

Query: 554 LLAKDEKYHE 563
            L K  K HE
Sbjct: 461 ALCKHGKIHE 470


>gi|356518398|ref|XP_003527866.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 603

 Score =  241 bits (616), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 157/555 (28%), Positives = 271/555 (48%), Gaps = 33/555 (5%)

Query: 2   ASRTQFRCLFSSETVSKVKLSSLFKSPRQIAAVSSPETQLNEFLHENCKSGIINLNEARY 61
           A+R++ R       VSK + S +    +QI  VS+P   LN    E+     +N + +  
Sbjct: 49  ATRSRKRLENRVSAVSKSEASGMNGRLQQI--VSTPNGDLNGIGMESSSPNGVNGSRSFE 106

Query: 62  FFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFG 121
            F    H++              + +N   +  + F  +++  G +PD +    LI    
Sbjct: 107 EFASNIHLR-------------KLVRNGELEEGLKFLERMIYQGDIPDVIACTSLI---- 149

Query: 122 NKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSG 181
              RG C   + ++AT + + +   G  PDVITY  LI G+C++G +  AL++ ++M   
Sbjct: 150 ---RGFCRSGKTRKATRIMEILENSGAVPDVITYNVLIGGYCKSGEIDKALQVLERMSVA 206

Query: 182 DYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCA 241
                     ++ +Y+ I+ SLC  G + +A E+      R   P V+  T LI   C  
Sbjct: 207 ---------PDVVTYNTILRSLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCND 257

Query: 242 GNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTY 301
               +   L  EM   G +P+++T+NV+I+ +CK G+++EA   L  M   G  P+  T+
Sbjct: 258 SGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPLYGCQPNVITH 317

Query: 302 NSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIIS 361
           N ++   C  GR   A  +   M  KGC  +VV++NILIN  C+   +  A+ +  ++  
Sbjct: 318 NIILRSMCSTGRWMDAERLLADMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPK 377

Query: 362 NGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQE 421
           +G     ++YN LL G  Q  +   A +  + M      PD+ TYN L+  LCK+     
Sbjct: 378 HGCMPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKADA 437

Query: 422 AVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIH 481
           AV++ + L        +  +N +IDGL K G+ + A EL  ++ +KGL P ++TYS ++ 
Sbjct: 438 AVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAAELLEEMRRKGLKPDIITYSTLLR 497

Query: 482 GLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNL 541
           GL  +GK+++A      ME     P+ VT+N +M G  +  +TS+ ++ L  M   E+  
Sbjct: 498 GLGCEGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMV--EKGC 555

Query: 542 VPDDTTFSIVVDLLA 556
            P   T++I+++ +A
Sbjct: 556 KPTKATYTILIEGIA 570


>gi|242092012|ref|XP_002436496.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
 gi|241914719|gb|EER87863.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
          Length = 698

 Score =  241 bits (616), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 157/530 (29%), Positives = 250/530 (47%), Gaps = 63/530 (11%)

Query: 55  NLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLN 114
           +L  AR FF  M     +P + ++N+L  A+    H    +S  R +   G  P+ +T N
Sbjct: 137 SLPSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSVLRDMRGAGCDPNAVTYN 196

Query: 115 ILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRL 174
            L+  F       C    +  A  L   M   G++P+++T+ +++NG C+ G +  A ++
Sbjct: 197 TLVAAF-------CRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNGICKAGRMEDARKV 249

Query: 175 HKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTL 234
             +MV    + GL    +  SY+ ++   CK G   +A  +F EM  +GI P VV  T+L
Sbjct: 250 FDEMV----KEGL--APDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDVVTFTSL 303

Query: 235 IHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGL 294
           IH  C AGN E   GL  EM + G + N +TF  +ID  CK G +++A   +  M Q  +
Sbjct: 304 IHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVREMRQCRI 363

Query: 295 NPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMS 354
            P    YN+L++GYC+VGR+D ARE+   M +KG K  VV+Y+ +++ YCK  +   A  
Sbjct: 364 QPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNGDTHSAFQ 423

Query: 355 LYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLC 414
           L +Q++ NGV    ITY++L+  L +  + G A  LF  M    ++PD  TY  LIDG C
Sbjct: 424 LNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYTSLIDGHC 483

Query: 415 KNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVV 474
           K   V+ A+ L   +        +  ++ LI+GL K+ R   A  L  KL  +  VP  +
Sbjct: 484 KEGNVERALSLHDEMVKAGVLPDVVTYSVLINGLSKSARTKEAQRLLFKLYHEEPVPANI 543

Query: 475 --------------------------------------------------TYSIMIHGLC 484
                                                              YS++IHG C
Sbjct: 544 KYDALMRCCRNAELKSVLALLKGFCMKGLMNEADKVYQSILDRNWNLDGSVYSVLIHGHC 603

Query: 485 RKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKM 534
           R+G + KA  F   M + G APN  +  +L+ G  +     +  +++ ++
Sbjct: 604 REGNVMKALSFHKQMLQCGFAPNSTSTISLIRGLFEKGMVVEADQVIQQL 653



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 121/417 (29%), Positives = 217/417 (52%), Gaps = 9/417 (2%)

Query: 147 GVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKE 206
           G  P V+ Y  ++       +L  A R    M+S    +G+    N+++Y+I++ +LC  
Sbjct: 118 GYAPSVLAYNAVLLAL-SDASLPSARRFFDSMLS----DGV--APNVYTYNILVRALCGR 170

Query: 207 GLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTF 266
           G   +A  +  +M+G G +P  V   TL+  FC AG  +    L   M + G +PNL+TF
Sbjct: 171 GHRKEALSVLRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTF 230

Query: 267 NVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHS 326
           N +++ +CK G++ +A  + + M++ GL PD  +YN+L+ GYC VG    A  +F  M  
Sbjct: 231 NSVVNGICKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTR 290

Query: 327 KGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGY 386
           KG    VV++  LI+  CK  N+E A+ L R++   G++   IT+  L+ G  + G    
Sbjct: 291 KGIMPDVVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDD 350

Query: 387 AQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLID 446
           A     EM+   ++P +  YN LI+G C    + EA +L   +E    +  +  ++ ++ 
Sbjct: 351 ALLAVREMRQCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILS 410

Query: 447 GLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAP 506
             CK G   +A++L  ++ + G++P  +TYS +I  LC + +L  A+     M   G  P
Sbjct: 411 AYCKNGDTHSAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQP 470

Query: 507 NVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
           + VT+ +L+ G  +     + + L  +M +    ++PD  T+S++++ L+K  +  E
Sbjct: 471 DEVTYTSLIDGHCKEGNVERALSLHDEMVKA--GVLPDVVTYSVLINGLSKSARTKE 525



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 119/406 (29%), Positives = 213/406 (52%), Gaps = 6/406 (1%)

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
           +  A   F +M++ GV P+V TY  L+   C  G+   AL + + M       G     N
Sbjct: 138 LPSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSVLRDM------RGAGCDPN 191

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
             +Y+ ++ + C+ G VD+A+ L   M+  G+ P +V   ++++G C AG  E+   +F 
Sbjct: 192 AVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNGICKAGRMEDARKVFD 251

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
           EM+  G  P+ +++N ++   CK G  +EA  +   M ++G+ PD  T+ SL+   C  G
Sbjct: 252 EMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDVVTFTSLIHVMCKAG 311

Query: 313 RIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYN 372
            ++ A  +   M  +G +   +++  LI+G+CK   +++A+   R++    ++ +V+ YN
Sbjct: 312 NLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVREMRQCRIQPSVVCYN 371

Query: 373 TLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMN 432
            L++G    G+   A++L  EM+   V+PD+ TY+ ++   CKN     A +L   +  N
Sbjct: 372 ALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNGDTHSAFQLNQQMLEN 431

Query: 433 KFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKA 492
                   ++ LI  LC+  RL +A  LF  +   GL P  VTY+ +I G C++G +E+A
Sbjct: 432 GVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYTSLIDGHCKEGNVERA 491

Query: 493 NDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPE 538
                 M K G  P+VVT++ L++G  ++ +T +   LL K+   E
Sbjct: 492 LSLHDEMVKAGVLPDVVTYSVLINGLSKSARTKEAQRLLFKLYHEE 537



 Score =  182 bits (461), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 142/519 (27%), Positives = 232/519 (44%), Gaps = 106/519 (20%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
           N  +   C++G   ++ A      M      P + +FN +   + K    +     + ++
Sbjct: 196 NTLVAAFCRAG--EVDRAERLVDMMREGGLKPNLVTFNSVVNGICKAGRMEDARKVFDEM 253

Query: 102 VSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLING 161
           V  GL PD ++ N L+        G C      EA  +F  M   G+ PDV+T+ +LI+ 
Sbjct: 254 VKEGLAPDGVSYNTLVG-------GYCKVGCSHEALSVFAEMTRKGIMPDVVTFTSLIHV 306

Query: 162 FCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKG 221
            C+ GNL  A+ L ++M     E GL  + N  +++ +ID  CK+G +D A     EM+ 
Sbjct: 307 MCKAGNLERAVGLVREM----RERGL--QMNEITFTALIDGFCKKGFLDDALLAVREMRQ 360

Query: 222 RGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINE 281
             I P+VV    LI+G+C  G  +E   L  EM   G +P+++T++ ++   CK G  + 
Sbjct: 361 CRIQPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNGDTHS 420

Query: 282 ANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILIN 341
           A  L + M++ G+ PD  TY+SL+   C   R+  A  +F +M S G +   V+Y  LI+
Sbjct: 421 AFQLNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYTSLID 480

Query: 342 GYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEP 401
           G+CK  NVE A+SL+ +++  GV   V+TY+ L++GL ++ +   AQ+L    KLY+ EP
Sbjct: 481 GHCKEGNVERALSLHDEMVKAGVLPDVVTYSVLINGLSKSARTKEAQRLL--FKLYHEEP 538

Query: 402 ----------------------------------------------------DLSTYNIL 409
                                                               D S Y++L
Sbjct: 539 VPANIKYDALMRCCRNAELKSVLALLKGFCMKGLMNEADKVYQSILDRNWNLDGSVYSVL 598

Query: 410 IDGLCKNNCVQEAVKLFH--MLE--------------MNKFEFGI---------EIFNC- 443
           I G C+   V +A+  FH  ML+                 FE G+         ++ NC 
Sbjct: 599 IHGHCREGNVMKALS-FHKQMLQCGFAPNSTSTISLIRGLFEKGMVVEADQVIQQLLNCC 657

Query: 444 ----------LIDGLCKAGRLDNAWELFHKLPQKGLVPT 472
                     LID   K G +D   ++ H + + GL+P+
Sbjct: 658 SLADAEASKALIDLNLKEGNVDAVLDVLHGMARDGLLPS 696


>gi|224111844|ref|XP_002316000.1| predicted protein [Populus trichocarpa]
 gi|222865040|gb|EEF02171.1| predicted protein [Populus trichocarpa]
          Length = 745

 Score =  241 bits (616), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 153/532 (28%), Positives = 259/532 (48%), Gaps = 44/532 (8%)

Query: 72  SPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCF---GNKERGLC 128
           +P + SFN +     K    D   SF+  ++  G+LPD  + NILI+     G+ E  L 
Sbjct: 182 APSVVSFNTIMSRYCKLGLADVAKSFFCMMLKYGILPDTYSYNILIHGLIVAGSMEEALE 241

Query: 129 VENRIKEATWLFKNMIAF---------------------------GVRPDVITYGTLING 161
           + N + E   L  +M+ +                           G++PD++TY  LI G
Sbjct: 242 LTNDM-EKQGLQPDMVTYKIVAKGFHLLGLMSGAREIIQKMLTDEGLKPDLVTYTVLICG 300

Query: 162 FCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKG 221
            C+ GN+  ALRL + ++S  ++       N+  YS+++ SLCK G VD+A +L  EM+ 
Sbjct: 301 HCQMGNIEEALRLRRDLLSSGFQ------LNVILYSVLLSSLCKRGQVDEALQLLYEMEA 354

Query: 222 RGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINE 281
             + P +V  + LIHG C  G  ++   L+ EM      PN    + ++  LC+ G +++
Sbjct: 355 NNLQPDLVTYSILIHGLCKQGKVQQAIQLYKEMCFNRIFPNSFAHSGILKGLCEKGMLSD 414

Query: 282 ANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILIN 341
           A    + +I   L PD   YN ++DGY  +G ++ A  ++  +  K    ++V++N LI 
Sbjct: 415 ARMYFDSLIMSNLRPDVTLYNIMIDGYVKLGDVEEAVRLYKRLRDKAITPSIVTFNSLIY 474

Query: 342 GYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEP 401
           G+CK   V EA  L   I  +G+  + +TY TL++   + G      +L  EM L ++EP
Sbjct: 475 GFCKNRKVVEARRLLESIKLHGLEPSAVTYTTLMNAYCEEGNINKLHELLLEMNLKDIEP 534

Query: 402 DLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELF 461
            + TY ++I GLCK   ++E+V+L   +           +N +I   CKA  +  A+EL 
Sbjct: 535 TVVTYTVVIKGLCKQRKLEESVQLLEDMRAKGLAPDQITYNTIIQCFCKAKDMRKAFELL 594

Query: 462 HKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQN 521
             +    L PT  TY+++I GLCR G +E A+  L+ ++        V + T++      
Sbjct: 595 DDMLIHNLEPTPATYNVLIDGLCRYGDVEDADRVLVSLQDRNINLTKVAYTTMIKAHCVK 654

Query: 522 NKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAK-----DEKYHECSAVS 568
               + V++ H+M E    +   D  +S V++ L K     + KY+ C  +S
Sbjct: 655 GDAQRAVKVFHQMVEKGFEVSIKD--YSAVINRLCKRCLINEAKYYFCIMLS 704



 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 135/462 (29%), Positives = 240/462 (51%), Gaps = 13/462 (2%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
           P + ++ +L     +  + +  +   R L+S G   + +  ++L++        LC   +
Sbjct: 289 PDLVTYTVLICGHCQMGNIEEALRLRRDLLSSGFQLNVILYSVLLS-------SLCKRGQ 341

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
           + EA  L   M A  ++PD++TY  LI+G C+ G +  A++L+K+M      N +    N
Sbjct: 342 VDEALQLLYEMEANNLQPDLVTYSILIHGLCKQGKVQQAIQLYKEMCF----NRIFP--N 395

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
            F++S I+  LC++G++  A+  F  +    + P V +   +I G+   G+ EE   L+ 
Sbjct: 396 SFAHSGILKGLCEKGMLSDARMYFDSLIMSNLRPDVTLYNIMIDGYVKLGDVEEAVRLYK 455

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
            + D    P+++TFN +I   CK  K+ EA  LLE +   GL P   TY +LM+ YC  G
Sbjct: 456 RLRDKAITPSIVTFNSLIYGFCKNRKVVEARRLLESIKLHGLEPSAVTYTTLMNAYCEEG 515

Query: 313 RIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYN 372
            I+   E+ L M+ K  + TVV+Y ++I G CK   +EE++ L   + + G+    ITYN
Sbjct: 516 NINKLHELLLEMNLKDIEPTVVTYTVVIKGLCKQRKLEESVQLLEDMRAKGLAPDQITYN 575

Query: 373 TLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMN 432
           T++    +A     A +L D+M ++N+EP  +TYN+LIDGLC+   V++A ++   L+  
Sbjct: 576 TIIQCFCKAKDMRKAFELLDDMLIHNLEPTPATYNVLIDGLCRYGDVEDADRVLVSLQDR 635

Query: 433 KFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKA 492
                   +  +I   C  G    A ++FH++ +KG   ++  YS +I+ LC++  + +A
Sbjct: 636 NINLTKVAYTTMIKAHCVKGDAQRAVKVFHQMVEKGFEVSIKDYSAVINRLCKRCLINEA 695

Query: 493 NDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKM 534
             +   M  +G +P+   F  +++ F +      V ELL  M
Sbjct: 696 KYYFCIMLSDGVSPDQEIFEMMLNAFHRAGHVHSVFELLAVM 737



 Score =  221 bits (563), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 152/556 (27%), Positives = 270/556 (48%), Gaps = 26/556 (4%)

Query: 3   SRTQFRCLFSSETVSKVKLSSLFKSPRQIAAVSSPETQLNEFLHENCKSGIINLNEARYF 62
           SR +F   F    VS+  +S +    R+   +      L++ L E   S +++  +A + 
Sbjct: 53  SRNEFG--FQHSRVSRFLVSHVLARKRRFKDL---RLVLDQMLQEEVASRMVH--DALFV 105

Query: 63  FGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGN 122
              M      P I ++N L   +   RH D +   Y  +   G      T +I+++    
Sbjct: 106 LVKMKEQNLRPSIQTYNSLLYNL---RHTDIMWDVYNDIKDSGTPQSARTSSIIVD---- 158

Query: 123 KERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGD 182
              GLC ++R ++A    +        P V+++ T+++ +C+ G   VA      M+   
Sbjct: 159 ---GLCGQSRFRDAVLFLRQNDGKEFAPSVVSFNTIMSRYCKLGLADVAKSFFCMML--- 212

Query: 183 YENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAG 242
            + G++  T  +SY+I+I  L   G +++A EL  +M+ +G+ P +V    +  GF   G
Sbjct: 213 -KYGILPDT--YSYNILIHGLIVAGSMEEALELTNDMEKQGLQPDMVTYKIVAKGFHLLG 269

Query: 243 NWEEVNGLFIEML-DLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTY 301
                  +  +ML D G +P+L+T+ V+I   C+ G I EA  L   ++  G   +   Y
Sbjct: 270 LMSGAREIIQKMLTDEGLKPDLVTYTVLICGHCQMGNIEEALRLRRDLLSSGFQLNVILY 329

Query: 302 NSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIIS 361
           + L+   C  G++D A ++   M +   +  +V+Y+ILI+G CK   V++A+ LY+++  
Sbjct: 330 SVLLSSLCKRGQVDEALQLLYEMEANNLQPDLVTYSILIHGLCKQGKVQQAIQLYKEMCF 389

Query: 362 NGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQE 421
           N +      ++ +L GL + G    A+  FD + + N+ PD++ YNI+IDG  K   V+E
Sbjct: 390 NRIFPNSFAHSGILKGLCEKGMLSDARMYFDSLIMSNLRPDVTLYNIMIDGYVKLGDVEE 449

Query: 422 AVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIH 481
           AV+L+  L        I  FN LI G CK  ++  A  L   +   GL P+ VTY+ +++
Sbjct: 450 AVRLYKRLRDKAITPSIVTFNSLIYGFCKNRKVVEARRLLESIKLHGLEPSAVTYTTLMN 509

Query: 482 GLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNL 541
             C +G + K ++ LL M      P VVT+  ++ G  +  K  + V+LL  M    + L
Sbjct: 510 AYCEEGNINKLHELLLEMNLKDIEPTVVTYTVVIKGLCKQRKLEESVQLLEDMR--AKGL 567

Query: 542 VPDDTTFSIVVDLLAK 557
            PD  T++ ++    K
Sbjct: 568 APDQITYNTIIQCFCK 583



 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 140/467 (29%), Positives = 233/467 (49%), Gaps = 47/467 (10%)

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
           + +A ++   M    +RP + TY +L+     T  +       K   SG  ++   S   
Sbjct: 99  VHDALFVLVKMKEQNLRPSIQTYNSLLYNLRHTDIMWDVYNDIKD--SGTPQSARTS--- 153

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
               SII+D LC +     A     +  G+   P+VV   T++  +C  G  +     F 
Sbjct: 154 ----SIIVDGLCGQSRFRDAVLFLRQNDGKEFAPSVVSFNTIMSRYCKLGLADVAKSFFC 209

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
            ML  G  P+  ++N++I  L   G + EA  L   M ++GL PD  TY  +  G+ L+G
Sbjct: 210 MMLKYGILPDTYSYNILIHGLIVAGSMEEALELTNDMEKQGLQPDMVTYKIVAKGFHLLG 269

Query: 313 RIDTAREIFLSMHS-KGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
            +  AREI   M + +G K  +V+Y +LI G+C++ N+EEA+ L R ++S+G +  VI Y
Sbjct: 270 LMSGAREIIQKMLTDEGLKPDLVTYTVLICGHCQMGNIEEALRLRRDLLSSGFQLNVILY 329

Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKL------ 425
           + LLS L + GQ   A +L  EM+  N++PDL TY+ILI GLCK   VQ+A++L      
Sbjct: 330 SVLLSSLCKRGQVDEALQLLYEMEANNLQPDLVTYSILIHGLCKQGKVQQAIQLYKEMCF 389

Query: 426 -----------------------------FHMLEMNKFEFGIEIFNCLIDGLCKAGRLDN 456
                                        F  L M+     + ++N +IDG  K G ++ 
Sbjct: 390 NRIFPNSFAHSGILKGLCEKGMLSDARMYFDSLIMSNLRPDVTLYNIMIDGYVKLGDVEE 449

Query: 457 AWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMH 516
           A  L+ +L  K + P++VT++ +I+G C+  K+ +A   L  ++ +G  P+ VT+ TLM+
Sbjct: 450 AVRLYKRLRDKAITPSIVTFNSLIYGFCKNRKVVEARRLLESIKLHGLEPSAVTYTTLMN 509

Query: 517 GFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
            + +    +K+ ELL +M    +++ P   T+++V+  L K  K  E
Sbjct: 510 AYCEEGNINKLHELLLEM--NLKDIEPTVVTYTVVIKGLCKQRKLEE 554



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 115/423 (27%), Positives = 211/423 (49%), Gaps = 17/423 (4%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CK G   ++EA      M      P + ++++L   + K       I  Y+++    + P
Sbjct: 337 CKRG--QVDEALQLLYEMEANNLQPDLVTYSILIHGLCKQGKVQQAIQLYKEMCFNRIFP 394

Query: 109 D-FLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGN 167
           + F    IL        +GLC +  + +A   F ++I   +RPDV  Y  +I+G+ + G+
Sbjct: 395 NSFAHSGIL--------KGLCEKGMLSDARMYFDSLIMSNLRPDVTLYNIMIDGYVKLGD 446

Query: 168 LSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPA 227
           +  A+RL+K++      +  I+ + I +++ +I   CK   V +A+ L   +K  G+ P+
Sbjct: 447 VEEAVRLYKRL-----RDKAITPS-IVTFNSLIYGFCKNRKVVEARRLLESIKLHGLEPS 500

Query: 228 VVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLE 287
            V  TTL++ +C  GN  +++ L +EM      P ++T+ V+I  LCK  K+ E+  LLE
Sbjct: 501 AVTYTTLMNAYCEEGNINKLHELLLEMNLKDIEPTVVTYTVVIKGLCKQRKLEESVQLLE 560

Query: 288 LMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKIL 347
            M  +GL PD+ TYN+++  +C    +  A E+   M     + T  +YN+LI+G C+  
Sbjct: 561 DMRAKGLAPDQITYNTIIQCFCKAKDMRKAFELLDDMLIHNLEPTPATYNVLIDGLCRYG 620

Query: 348 NVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYN 407
           +VE+A  +   +    +  T + Y T++      G A  A K+F +M     E  +  Y+
Sbjct: 621 DVEDADRVLVSLQDRNINLTKVAYTTMIKAHCVKGDAQRAVKVFHQMVEKGFEVSIKDYS 680

Query: 408 ILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQK 467
            +I+ LCK   + EA   F ++  +      EIF  +++   +AG + + +EL   + + 
Sbjct: 681 AVINRLCKRCLINEAKYYFCIMLSDGVSPDQEIFEMMLNAFHRAGHVHSVFELLAVMIKF 740

Query: 468 GLV 470
           GL+
Sbjct: 741 GLL 743



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 81/308 (26%), Positives = 142/308 (46%), Gaps = 40/308 (12%)

Query: 55  NLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSI---GLLPDFL 111
           ++ EA   +  +     +P I +FN L     KNR    V+   R L SI   GL P  +
Sbjct: 446 DVEEAVRLYKRLRDKAITPSIVTFNSLIYGFCKNR---KVVEARRLLESIKLHGLEPSAV 502

Query: 112 TLNILINCF---GNKER-------------------------GLCVENRIKEATWLFKNM 143
           T   L+N +   GN  +                         GLC + +++E+  L ++M
Sbjct: 503 TYTTLMNAYCEEGNINKLHELLLEMNLKDIEPTVVTYTVVIKGLCKQRKLEESVQLLEDM 562

Query: 144 IAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSL 203
            A G+ PD ITY T+I  FC+  ++  A  L   M+  + E          +Y+++ID L
Sbjct: 563 RAKGLAPDQITYNTIIQCFCKAKDMRKAFELLDDMLIHNLE------PTPATYNVLIDGL 616

Query: 204 CKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNL 263
           C+ G V+ A  + + ++ R IN   V  TT+I   C  G+ +    +F +M++ G   ++
Sbjct: 617 CRYGDVEDADRVLVSLQDRNINLTKVAYTTMIKAHCVKGDAQRAVKVFHQMVEKGFEVSI 676

Query: 264 LTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLS 323
             ++ +I+ LCK   INEA     +M+  G++PD+  +  +++ +   G + +  E+   
Sbjct: 677 KDYSAVINRLCKRCLINEAKYYFCIMLSDGVSPDQEIFEMMLNAFHRAGHVHSVFELLAV 736

Query: 324 MHSKGCKH 331
           M   G  H
Sbjct: 737 MIKFGLLH 744



 Score =  109 bits (272), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 77/293 (26%), Positives = 145/293 (49%), Gaps = 6/293 (2%)

Query: 279 INEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNI 338
           +++A  +L  M ++ L P   TYNSL+     +   D   +++  +   G   +  + +I
Sbjct: 99  VHDALFVLVKMKEQNLRPSIQTYNSLLYN---LRHTDIMWDVYNDIKDSGTPQSARTSSI 155

Query: 339 LINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYN 398
           +++G C      +A+   RQ        +V+++NT++S   + G A  A+  F  M  Y 
Sbjct: 156 IVDGLCGQSRFRDAVLFLRQNDGKEFAPSVVSFNTIMSRYCKLGLADVAKSFFCMMLKYG 215

Query: 399 VEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAW 458
           + PD  +YNILI GL     ++EA++L + +E    +  +  +  +  G    G +  A 
Sbjct: 216 ILPDTYSYNILIHGLIVAGSMEEALELTNDMEKQGLQPDMVTYKIVAKGFHLLGLMSGAR 275

Query: 459 ELFHK-LPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHG 517
           E+  K L  +GL P +VTY+++I G C+ G +E+A      +  +G   NV+ ++ L+  
Sbjct: 276 EIIQKMLTDEGLKPDLVTYTVLICGHCQMGNIEEALRLRRDLLSSGFQLNVILYSVLLSS 335

Query: 518 FLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKS 570
             +  +  + ++LL++M     NL PD  T+SI++  L K  K  +   + K 
Sbjct: 336 LCKRGQVDEALQLLYEM--EANNLQPDLVTYSILIHGLCKQGKVQQAIQLYKE 386


>gi|326525465|dbj|BAJ88779.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 680

 Score =  241 bits (615), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 134/422 (31%), Positives = 223/422 (52%), Gaps = 11/422 (2%)

Query: 142 NMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIID 201
            M+  G +P V+TY  L+   C++     A+ +  +M +           NI +Y++II+
Sbjct: 177 TMLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKG------CTPNIVTYNVIIN 230

Query: 202 SLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRP 261
            +C+EG VD AKE+   +   G  P +V  TT++ G C A  W++V  LF EM+D    P
Sbjct: 231 GMCREGRVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVP 290

Query: 262 NLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIF 321
           N +TF++++   C+GG +  A  +L+ M Q G  P+    N +++  C  GR+D A +  
Sbjct: 291 NEVTFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFL 350

Query: 322 LSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQA 381
            +M   GC    +SY  ++ G C+    E A  L  +++        +T+NT +  L Q 
Sbjct: 351 NNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQK 410

Query: 382 GQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIF 441
           G    A KL + M  Y     + TYN L+ G C    V  A++LF+ L     E     +
Sbjct: 411 GLIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNL---PCEPNTITY 467

Query: 442 NCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEK 501
             L+ GLC A RLD A EL  ++ QK      VT+++++   C+KG +E+A + +  M +
Sbjct: 468 TTLLTGLCHAERLDAAAELLAEMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMME 527

Query: 502 NGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKY 561
           +GC PN++TFNTL+ G  ++  + + +ELLH +     +L  D  T+S VVD+L+++++ 
Sbjct: 528 HGCTPNLITFNTLLDGITKDCNSEEALELLHGLVSKGVSL--DTITYSSVVDVLSREDRT 585

Query: 562 HE 563
            E
Sbjct: 586 EE 587



 Score =  235 bits (600), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 139/475 (29%), Positives = 236/475 (49%), Gaps = 18/475 (3%)

Query: 44  FLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVS 103
            L   CKS      EA      M     +P I ++N++   + +    D       +L S
Sbjct: 193 LLEAVCKSS--GFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAKEILNRLSS 250

Query: 104 IGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFC 163
            G  PD ++   ++       +GLC   R  +   LF  M+     P+ +T+  L+  FC
Sbjct: 251 YGFQPDIVSYTTVL-------KGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFC 303

Query: 164 RTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRG 223
           R G +  A+++ ++M     ++G    T + +  I+I+++CK+G VD A +    M   G
Sbjct: 304 RGGMVERAIQVLQQM----SQHGCTPNTTLCN--IVINAICKQGRVDDAYDFLNNMGMYG 357

Query: 224 INPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEAN 283
            NP  +  TT++ G C AG WE    L  EM+     PN +TFN  I  LC+ G I +A 
Sbjct: 358 CNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAI 417

Query: 284 GLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGY 343
            L+ELM + G +    TYN+L+ G+C+ GR+D+A E+F ++    C+   ++Y  L+ G 
Sbjct: 418 KLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNLP---CEPNTITYTTLLTGL 474

Query: 344 CKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDL 403
           C    ++ A  L  ++I        +T+N L+S   Q G    A +L ++M  +   P+L
Sbjct: 475 CHAERLDAAAELLAEMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNL 534

Query: 404 STYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHK 463
            T+N L+DG+ K+   +EA++L H L           ++ ++D L +  R + A ++ H 
Sbjct: 535 ITFNTLLDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQMLHA 594

Query: 464 LPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGF 518
           +   G+ P V  Y+ ++  LC++ + ++A DF  YM  NGC PN  T+  L+ G 
Sbjct: 595 VQDMGMRPKVGMYNKILFALCKRCETDQAIDFFAYMVSNGCMPNESTYIILIEGL 649


>gi|147817754|emb|CAN66662.1| hypothetical protein VITISV_031722 [Vitis vinifera]
          Length = 1060

 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 143/488 (29%), Positives = 247/488 (50%), Gaps = 26/488 (5%)

Query: 63  FGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGN 122
           +G M     SP + ++  L     +   +      + +++   + P  +   ILI     
Sbjct: 181 YGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILI----- 235

Query: 123 KERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGD 182
             RGLC E+RI EA  +F+ M   G+ P++ TY T+++G+C+  ++  AL L+ +M+   
Sbjct: 236 --RGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYXEMLG-- 291

Query: 183 YENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAG 242
             +GL+   N+ ++ I+ID LCK   +  A++  ++M   G+ P + V   LI G+C AG
Sbjct: 292 --DGLLP--NVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAG 347

Query: 243 NWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYN 302
           N  E   L  E+      P++ T++++I  LC   ++ EA+GLL+ M ++G  P+  TYN
Sbjct: 348 NLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYN 407

Query: 303 SLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISN 362
           +L+DGYC  G ++ A E+   M  KG +  +++++ LI+GYCK   +E AM LY +++  
Sbjct: 408 TLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIK 467

Query: 363 GVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEA 422
           G+   V+ Y  L+ G F+ G    A +L  EM+   + P++ T + LIDGLCK+  + +A
Sbjct: 468 GLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDA 527

Query: 423 VKLF-------------HMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGL 469
           +KLF             + L+ +       ++  LI GLC  GR+  A + F  +   GL
Sbjct: 528 IKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGL 587

Query: 470 VPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVE 529
            P V T  ++I G  R   L         + K G  PN   +  L  G+ ++      + 
Sbjct: 588 RPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMGIIPNSSVYRVLAKGYEESGYLKSALS 647

Query: 530 LLHKMAEP 537
              +  +P
Sbjct: 648 FCGEGVQP 655



 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 153/526 (29%), Positives = 251/526 (47%), Gaps = 62/526 (11%)

Query: 92  DAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPD 151
           +A+  +Y+    + +LP     N++++       GL  + R      ++ +M+A G  P+
Sbjct: 144 EALWVYYK----MDVLPAMQACNMVLD-------GLVKKGRFDTMWKVYGDMVARGASPN 192

Query: 152 VITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKT-------------------- 191
           V+TYGTLI+G CR G+   A RL  +M+       ++  T                    
Sbjct: 193 VVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFR 252

Query: 192 ---------NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAG 242
                    N+++Y+ ++D  CK   V KA EL+ EM G G+ P VV    LI G C   
Sbjct: 253 TMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYXEMLGDGLLPNVVTFGILIDGLCKTD 312

Query: 243 NWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYN 302
                    I+M   G  PN+  +N +ID  CK G ++EA  L   + +  + PD FTY+
Sbjct: 313 EMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYS 372

Query: 303 SLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISN 362
            L+ G C V R++ A  +   M  KG     V+YN LI+GYCK  N+E+A+ +  Q+   
Sbjct: 373 ILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEK 432

Query: 363 GVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEA 422
           G+   +IT++TL+ G  +AG+   A  L+ EM +  + PD+  Y  LIDG  K+   +EA
Sbjct: 433 GIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEA 492

Query: 423 VKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELF-------------HKLPQKGL 469
            +L   ++       +   +CLIDGLCK GR+ +A +LF             ++L +   
Sbjct: 493 FRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLC 552

Query: 470 VPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVE 529
            P  V Y+ +I GLC  G++ KA+ F   M  +G  P+V T   ++ G  +      V+ 
Sbjct: 553 SPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMM 612

Query: 530 LLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKSSYRAC 575
           L   +   +  ++P+ + + ++        K +E S   KS+   C
Sbjct: 613 LQADIL--KMGIIPNSSVYRVLA-------KGYEESGYLKSALSFC 649



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 138/444 (31%), Positives = 223/444 (50%), Gaps = 20/444 (4%)

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
           ++EA W++  M    V P +     +++G  + G      +++  MV+        +  N
Sbjct: 142 VEEALWVYYKM---DVLPAMQACNMVLDGLVKKGRFDTMWKVYGDMVARG------ASPN 192

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
           + +Y  +ID  C++G   KA  LF EM  + I P VV+ T LI G C      E   +F 
Sbjct: 193 VVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFR 252

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
            M + G  PNL T+N M+D  CK   + +A  L   M+  GL P+  T+  L+DG C   
Sbjct: 253 TMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYXEMLGDGLLPNVVTFGILIDGLCKTD 312

Query: 313 RIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYN 372
            + +AR+  + M S G    +  YN LI+GYCK  N+ EA+SL+ +I  + +   V TY+
Sbjct: 313 EMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYS 372

Query: 373 TLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMN 432
            L+ GL    +   A  L  EMK     P+  TYN LIDG CK   +++A+++   +   
Sbjct: 373 ILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEK 432

Query: 433 KFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKA 492
             E  I  F+ LIDG CKAG+++ A  L+ ++  KGL+P VV Y+ +I G  + G  ++A
Sbjct: 433 GIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEA 492

Query: 493 NDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELL----------HKMAEPERNLV 542
                 M++ G  PNV T + L+ G  ++ + S  ++L            K  E +R+L 
Sbjct: 493 FRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLC 552

Query: 543 -PDDTTFSIVVDLLAKDEKYHECS 565
            P+   ++ ++  L  D +  + S
Sbjct: 553 SPNHVMYTALIQGLCTDGRIFKAS 576



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 130/446 (29%), Positives = 205/446 (45%), Gaps = 39/446 (8%)

Query: 52  GIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFL 111
           G   ++EA   F  M +    P + ++N +     K  H    +  Y +++  GLLP+ +
Sbjct: 240 GESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYXEMLGDGLLPNVV 299

Query: 112 TLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVA 171
           T  ILI+       GLC  + +  A     +M +FGV P++  Y  LI+G+C+ GNLS A
Sbjct: 300 TFGILID-------GLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEA 352

Query: 172 LRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVC 231
           L LH ++   +         ++F+YSI+I  LC    +++A  L  EMK +G  P  V  
Sbjct: 353 LSLHSEIEKHEI------LPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTY 406

Query: 232 TTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQ 291
            TLI G+C  GN E+   +  +M + G  PN++TF+ +ID  CK GK+  A GL   M+ 
Sbjct: 407 NTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVI 466

Query: 292 RGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEE 351
           +GL PD   Y +L+DG+   G    A  +   M   G    V + + LI+G CK   + +
Sbjct: 467 KGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISD 526

Query: 352 AMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILID 411
           A+ L+  +   G   T    N L   L                      P+   Y  LI 
Sbjct: 527 AIKLF--LAKTGTDTTGSKTNELDRSL--------------------CSPNHVMYTALIQ 564

Query: 412 GLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNC--LIDGLCKAGRLDNAWELFHKLPQKGL 469
           GLC +  + +A K F   +M       ++F C  +I G  +A  L +   L   + + G+
Sbjct: 565 GLCTDGRIFKASKFFS--DMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMGI 622

Query: 470 VPTVVTYSIMIHGLCRKGKLEKANDF 495
           +P    Y ++  G    G L+ A  F
Sbjct: 623 IPNSSVYRVLAKGYEESGYLKSALSF 648



 Score = 76.3 bits (186), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 99/438 (22%), Positives = 167/438 (38%), Gaps = 67/438 (15%)

Query: 125 RGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYE 184
           +GLC + RI +A+  F +M   G+RPDV T   +I G  R  +L   + L   ++    +
Sbjct: 564 QGLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADIL----K 619

Query: 185 NGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCT------TLIHGF 238
            G+I  +++  Y ++     + G +  A    L   G G+ P   V +      T+   F
Sbjct: 620 MGIIPNSSV--YRVLAKGYEESGYLKSA----LSFCGEGVQPLDRVNSEPWGSYTIRSRF 673

Query: 239 --CCAGNWEEVNGLFIEMLDLG--------------PRPNLLTFNVMIDCLCKGGKINEA 282
             C     +E +  ++    +               P P+ +   V         + N+A
Sbjct: 674 QLCVVTEKKECHSSYLTAFGIHSFVLLWYFHTILKPPSPHEILKKVPFIGQKGDQRPNKA 733

Query: 283 NGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILING 342
             L   M      PD  T    +     +G +D    I   +  +G    +   N LIN 
Sbjct: 734 LQLFRQMQMDDXQPDIVTVTVALSACADLGALDMGEWIHAYIRHRGLDTDLCLNNSLINM 793

Query: 343 YCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYN---- 398
           Y K   +  A    R++     ++ V T+ +++ G    GQA  A +LF EMK  N    
Sbjct: 794 YSKCGEIGTA----RRLFDGTQKKDVTTWTSMIVGHALHGQAEEALQLFTEMKETNKRAR 849

Query: 399 ------------VEPDLSTYNILIDGLCKNNCVQEAVKLFH-MLEMNKFEFGIEIFNCLI 445
                       V P+  T+  ++        V+E  + F  M E       I  F C++
Sbjct: 850 KNKRNGEXESSLVLPNDVTFMGVLMACSHAGLVEEGKQHFRSMKEDYSLRPRISHFGCMV 909

Query: 446 DGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGK-----------LEKAND 494
           D LC+AG L  A+E   K+P +   P  V +  ++     +G              +A  
Sbjct: 910 DLLCRAGLLTEAYEFILKMPVR---PNAVVWRTLLGACSLQGDSNGNGNSNIKIXSEARR 966

Query: 495 FLLYMEKNGCAPNVVTFN 512
            LL +E +    NV+  N
Sbjct: 967 QLLELEPSHVGDNVIMSN 984


>gi|359491317|ref|XP_003634263.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g61400-like [Vitis vinifera]
          Length = 665

 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 142/472 (30%), Positives = 244/472 (51%), Gaps = 26/472 (5%)

Query: 63  FGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGN 122
           +G M     SP + ++  L     +   +      + +++   + P  +   ILI     
Sbjct: 181 YGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILI----- 235

Query: 123 KERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGD 182
             RGLC E+RI EA  +F+ M   G+ P++ TY T+++G+C+  ++  AL L+++M+   
Sbjct: 236 --RGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLG-- 291

Query: 183 YENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAG 242
             +GL+   N+ ++ I+ID LCK   +  A++  ++M   G+ P + V   LI G+C AG
Sbjct: 292 --DGLLP--NVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAG 347

Query: 243 NWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYN 302
           N  E   L  E+      P++ T++++I  LC   ++ EA+GLL+ M ++G  P+  TYN
Sbjct: 348 NLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYN 407

Query: 303 SLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISN 362
           +L+DGYC  G ++ A E+   M  KG +  +++++ LI+GYCK   +E AM LY +++  
Sbjct: 408 TLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIK 467

Query: 363 GVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEA 422
           G+   V+ Y  L+ G F+ G    A +L  EM+   + P++ T + LIDGLCK+  + +A
Sbjct: 468 GLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDA 527

Query: 423 VKLF-------------HMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGL 469
           +KLF             + L+ +       ++  LI GLC  GR+  A + F  +   GL
Sbjct: 528 IKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGL 587

Query: 470 VPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQN 521
            P V T  ++I G  R   L         + K G  PN   +  L  G+ ++
Sbjct: 588 RPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMGIIPNSSVYRVLAKGYEES 639



 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 153/524 (29%), Positives = 251/524 (47%), Gaps = 62/524 (11%)

Query: 92  DAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPD 151
           +A+  +Y+    + +LP     N++++       GL  + R      ++ +M+A G  P+
Sbjct: 144 EALWVYYK----MDVLPAMQACNMVLD-------GLVKKGRFDTMWKVYGDMVARGASPN 192

Query: 152 VITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKT-------------------- 191
           V+TYGTLI+G CR G+   A RL  +M+       ++  T                    
Sbjct: 193 VVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFR 252

Query: 192 ---------NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAG 242
                    N+++Y+ ++D  CK   V KA EL+ EM G G+ P VV    LI G C   
Sbjct: 253 TMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTD 312

Query: 243 NWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYN 302
                    I+M   G  PN+  +N +ID  CK G ++EA  L   + +  + PD FTY+
Sbjct: 313 EMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYS 372

Query: 303 SLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISN 362
            L+ G C V R++ A  +   M  KG     V+YN LI+GYCK  N+E+A+ +  Q+   
Sbjct: 373 ILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEK 432

Query: 363 GVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEA 422
           G+   +IT++TL+ G  +AG+   A  L+ EM +  + PD+  Y  LIDG  K+   +EA
Sbjct: 433 GIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEA 492

Query: 423 VKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELF-------------HKLPQKGL 469
            +L   ++       +   +CLIDGLCK GR+ +A +LF             ++L +   
Sbjct: 493 FRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLC 552

Query: 470 VPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVE 529
            P  V Y+ +I GLC  G++ KA+ F   M  +G  P+V T   ++ G  +      V+ 
Sbjct: 553 SPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMM 612

Query: 530 LLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKSSYR 573
           L   +   +  ++P+ + + ++        K +E S   KS+ R
Sbjct: 613 LQADIL--KMGIIPNSSVYRVLA-------KGYEESGYLKSALR 647



 Score =  221 bits (564), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 138/444 (31%), Positives = 224/444 (50%), Gaps = 20/444 (4%)

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
           ++EA W++  M    V P +     +++G  + G      +++  MV+        +  N
Sbjct: 142 VEEALWVYYKM---DVLPAMQACNMVLDGLVKKGRFDTMWKVYGDMVARG------ASPN 192

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
           + +Y  +ID  C++G   KA  LF EM  + I P VV+ T LI G C      E   +F 
Sbjct: 193 VVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFR 252

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
            M + G  PNL T+N M+D  CK   + +A  L + M+  GL P+  T+  L+DG C   
Sbjct: 253 TMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTD 312

Query: 313 RIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYN 372
            + +AR+  + M S G    +  YN LI+GYCK  N+ EA+SL+ +I  + +   V TY+
Sbjct: 313 EMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYS 372

Query: 373 TLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMN 432
            L+ GL    +   A  L  EMK     P+  TYN LIDG CK   +++A+++   +   
Sbjct: 373 ILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEK 432

Query: 433 KFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKA 492
             E  I  F+ LIDG CKAG+++ A  L+ ++  KGL+P VV Y+ +I G  + G  ++A
Sbjct: 433 GIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEA 492

Query: 493 NDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELL----------HKMAEPERNLV 542
                 M++ G  PNV T + L+ G  ++ + S  ++L            K  E +R+L 
Sbjct: 493 FRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLC 552

Query: 543 -PDDTTFSIVVDLLAKDEKYHECS 565
            P+   ++ ++  L  D +  + S
Sbjct: 553 SPNHVMYTALIQGLCTDGRIFKAS 576



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 129/443 (29%), Positives = 205/443 (46%), Gaps = 39/443 (8%)

Query: 52  GIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFL 111
           G   ++EA   F  M +    P + ++N +     K  H    +  Y++++  GLLP+ +
Sbjct: 240 GESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLPNVV 299

Query: 112 TLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVA 171
           T  ILI+       GLC  + +  A     +M +FGV P++  Y  LI+G+C+ GNLS A
Sbjct: 300 TFGILID-------GLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEA 352

Query: 172 LRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVC 231
           L LH ++   +         ++F+YSI+I  LC    +++A  L  EMK +G  P  V  
Sbjct: 353 LSLHSEIEKHEI------LPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTY 406

Query: 232 TTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQ 291
            TLI G+C  GN E+   +  +M + G  PN++TF+ +ID  CK GK+  A GL   M+ 
Sbjct: 407 NTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVI 466

Query: 292 RGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEE 351
           +GL PD   Y +L+DG+   G    A  +   M   G    V + + LI+G CK   + +
Sbjct: 467 KGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISD 526

Query: 352 AMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILID 411
           A+ L+  +   G   T    N L   L                      P+   Y  LI 
Sbjct: 527 AIKLF--LAKTGTDTTGSKTNELDRSL--------------------CSPNHVMYTALIQ 564

Query: 412 GLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNC--LIDGLCKAGRLDNAWELFHKLPQKGL 469
           GLC +  + +A K F   +M       ++F C  +I G  +A  L +   L   + + G+
Sbjct: 565 GLCTDGRIFKASKFFS--DMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMGI 622

Query: 470 VPTVVTYSIMIHGLCRKGKLEKA 492
           +P    Y ++  G    G L+ A
Sbjct: 623 IPNSSVYRVLAKGYEESGYLKSA 645


>gi|20219038|gb|AAM15782.1|AC104428_3 Putative indole-3-acetate beta-glucosyltransferase [Oryza sativa
           Japonica Group]
 gi|108706351|gb|ABF94146.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
           Japonica Group]
 gi|125585039|gb|EAZ25703.1| hypothetical protein OsJ_09536 [Oryza sativa Japonica Group]
          Length = 648

 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 146/505 (28%), Positives = 266/505 (52%), Gaps = 17/505 (3%)

Query: 41  LNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRK 100
           LN  +H  CK+  +  ++       M      P + + N++  A  +    +A ++    
Sbjct: 159 LNIMVHNYCKA--LEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMALVDS 216

Query: 101 LVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLIN 160
           +VS GL P  +T N ++       +GLC      +A  +FK M  FGV PDV ++  LI 
Sbjct: 217 MVSKGLKPGIVTYNSVL-------KGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIG 269

Query: 161 GFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMK 220
           GFCR G +  AL+++K+M       G+  K ++ S+S +I    + G +D A     EM+
Sbjct: 270 GFCRVGEIEEALKIYKEM----RHRGI--KPDLVSFSCLIGLFARRGKMDHAMAYLREMR 323

Query: 221 GRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKIN 280
             G+ P  V+ T +I GFC AG   +   +  EM+  G  P+++T+N +++ LCK  ++ 
Sbjct: 324 CFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLL 383

Query: 281 EANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILI 340
           +A GLL  M +RG+ PD  T+ +L+ GYC+ G++D A ++F +M ++  +  +V+YN LI
Sbjct: 384 DAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLI 443

Query: 341 NGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVE 400
           +G C+  ++++A  L+  + S  +    +TY+ L+    + GQ   A    DEM    + 
Sbjct: 444 DGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGIL 503

Query: 401 PDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWEL 460
           P++ TYN +I G C++  V +  K    + +NK    +  +N LI G  K  ++ +A++L
Sbjct: 504 PNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKL 563

Query: 461 FHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQ 520
            + + ++ + P VVTY+++I+G    G +++A      M   G  P+  T+ ++++G + 
Sbjct: 564 LNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVT 623

Query: 521 NNKTSKVVELLHKMAEPERNLVPDD 545
              + +  +L  +M   +R   PDD
Sbjct: 624 AGNSKEAFQLHDEML--QRGFAPDD 646



 Score =  236 bits (601), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 144/456 (31%), Positives = 240/456 (52%), Gaps = 15/456 (3%)

Query: 98  YRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGT 157
           YR + S     +  TLNI+++ +       C      +   +   M    V PDV+T+  
Sbjct: 144 YRLVFSSNSEVNTYTLNIMVHNY-------CKALEFDKVDAVISEMEKRCVFPDVVTHNV 196

Query: 158 LINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFL 217
           +++   R G+   A+ L   MVS     GL  K  I +Y+ ++  LC+ G+ DKA E+F 
Sbjct: 197 MVDARFRAGDAEAAMALVDSMVS----KGL--KPGIVTYNSVLKGLCRSGMWDKAWEVFK 250

Query: 218 EMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGG 277
           EM   G+ P V   T LI GFC  G  EE   ++ EM   G +P+L++F+ +I    + G
Sbjct: 251 EMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRG 310

Query: 278 KINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYN 337
           K++ A   L  M   GL PD   Y  ++ G+C  G +  A  +   M   GC   VV+YN
Sbjct: 311 KMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYN 370

Query: 338 ILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLY 397
            L+NG CK   + +A  L  ++   GV   + T+ TL+ G    G+   A +LFD M   
Sbjct: 371 TLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQ 430

Query: 398 NVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNA 457
            + PD+ TYN LIDG+C+   + +A  L+  +   +       ++ LID  C+ G++++A
Sbjct: 431 RLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDA 490

Query: 458 WELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHG 517
           +    ++  KG++P ++TY+ +I G CR G + K   FL  M  N  +P+++T+NTL+HG
Sbjct: 491 FGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHG 550

Query: 518 FLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
           +++ +K     +LL+ M E E+ + PD  T++++++
Sbjct: 551 YIKEDKMHDAFKLLN-MMEKEK-VQPDVVTYNMLIN 584



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 87/334 (26%), Positives = 155/334 (46%), Gaps = 37/334 (11%)

Query: 254 MLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGR 313
           +L   P P    F+++I    +  K  EA     L++   +       N+L+      G 
Sbjct: 77  LLGSSPTPQPRVFDLLIRTYTQSRKPREAFEAFRLILDHRVPIPAAASNALLAALSRAGW 136

Query: 314 IDTAREIFLSMHSKGCKHTVVSYNILINGYCKIL-------------------------- 347
              A + +  + S   +    + NI+++ YCK L                          
Sbjct: 137 PHLAADAYRLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNV 196

Query: 348 ---------NVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYN 398
                    + E AM+L   ++S G++  ++TYN++L GL ++G    A ++F EM  + 
Sbjct: 197 MVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFG 256

Query: 399 VEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAW 458
           V PD+ ++ ILI G C+   ++EA+K++  +     +  +  F+CLI    + G++D+A 
Sbjct: 257 VAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAM 316

Query: 459 ELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGF 518
               ++   GLVP  V Y+++I G CR G +  A      M   GC P+VVT+NTL++G 
Sbjct: 317 AYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGL 376

Query: 519 LQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVV 552
            +  +      LL++M   ER + PD  TF+ ++
Sbjct: 377 CKERRLLDAEGLLNEMR--ERGVPPDLCTFTTLI 408


>gi|224092436|ref|XP_002309609.1| predicted protein [Populus trichocarpa]
 gi|222855585|gb|EEE93132.1| predicted protein [Populus trichocarpa]
          Length = 841

 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 151/510 (29%), Positives = 263/510 (51%), Gaps = 18/510 (3%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CK G  +L+ A   F  M      P   ++ ++     KN + D     Y ++ +  + P
Sbjct: 340 CKQG--DLDSALELFDKMNENGICPNNVTYAVIIEWCCKNGNMDKAYEIYNQMKNKDISP 397

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
               +N LI       RG       +EA+ LF   +A G+  +V TY +L++  C+ G +
Sbjct: 398 TVFNVNSLI-------RGYLKARSPEEASKLFDEAVACGI-ANVFTYNSLLSWLCKEGKM 449

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
           S A  + +KMV      G+  + ++ SY+ +I   C++G +D A  +F+EM  +G+ P +
Sbjct: 450 SEACSIWEKMV----RKGV--RPSVVSYNNMILGHCQQGDMDSANGVFVEMLEKGLKPNL 503

Query: 229 VVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLEL 288
           +  + L+ G+   G+ E   GL+  M      P+  T N++I+ LCK G+ +E+   L+ 
Sbjct: 504 ITYSVLMDGYFKKGDTEYAFGLYDRMRGENIAPSDFTCNIIINGLCKAGRTSESQDRLKK 563

Query: 289 MIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILN 348
           ++Q G  P   TYN ++DG+   G +++A  ++  M   G    V +Y  LING+CK  N
Sbjct: 564 LVQEGFIPTCMTYNCIIDGFVKEGSVNSALAVYTEMCKIGVSPNVFTYTNLINGFCKSNN 623

Query: 349 VEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNI 408
           ++ A+ +  ++ + G+   V  Y  L+ G  + G    A +L  E++   + P+   Y+ 
Sbjct: 624 MDLALKVMDEMKNKGIELDVTVYCALIDGFCRKGDMVNASQLLSELQEVGLSPNKVVYSS 683

Query: 409 LIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKG 468
           +I G  K   ++ A+ L   +        ++I+  LI GL K G+L  A EL+ ++  KG
Sbjct: 684 MISGFRKLQNMEAALHLHKRMINEGIPCDLQIYTTLISGLLKEGKLLFASELYAEMLAKG 743

Query: 469 LVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVV 528
           ++P ++TYS++IHGLC KG+LE A   L  M++    P V  +NTL+ G  +     +  
Sbjct: 744 IMPDLITYSVLIHGLCNKGQLENAQKILEDMDRKCMTPTVFIYNTLITGHFKEGNLQEAF 803

Query: 529 ELLHKMAEPERNLVPDDTTFSIVVDLLAKD 558
            L ++M   ++ LVPDDTT+ I+V+   KD
Sbjct: 804 RLHNEML--DKGLVPDDTTYDILVNGKVKD 831



 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 157/562 (27%), Positives = 275/562 (48%), Gaps = 53/562 (9%)

Query: 56  LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNI 115
           L EA  +F    +        +++++  AV K     A +   R++   G +P  +    
Sbjct: 240 LEEAEGWFREAKNKGVELDARAYSIVIEAVCKKPDSVAALGLLREMRDKGWVPHEVIFTR 299

Query: 116 LINCFGNKERGLCV-ENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRL 174
           +I        G+C+ + ++ EA  +   M++ G   +V+   TL+ G+C+ G+L  AL L
Sbjct: 300 VI--------GVCMKQGKMLEAVKVKGEMLSCGKPMNVVVATTLMKGYCKQGDLDSALEL 351

Query: 175 HKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTL 234
             KM     ENG+    N  +Y++II+  CK G +DKA E++ +MK + I+P V    +L
Sbjct: 352 FDKM----NENGICP--NNVTYAVIIEWCCKNGNMDKAYEIYNQMKNKDISPTVFNVNSL 405

Query: 235 IHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGL 294
           I G+  A + EE + LF E +  G   N+ T+N ++  LCK GK++EA  + E M+++G+
Sbjct: 406 IRGYLKARSPEEASKLFDEAVACGI-ANVFTYNSLLSWLCKEGKMSEACSIWEKMVRKGV 464

Query: 295 NPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMS 354
            P   +YN+++ G+C  G +D+A  +F+ M  KG K  +++Y++L++GY K  + E A  
Sbjct: 465 RPSVVSYNNMILGHCQQGDMDSANGVFVEMLEKGLKPNLITYSVLMDGYFKKGDTEYAFG 524

Query: 355 LY-----------------------------------RQIISNGVRQTVITYNTLLSGLF 379
           LY                                   ++++  G   T +TYN ++ G  
Sbjct: 525 LYDRMRGENIAPSDFTCNIIINGLCKAGRTSESQDRLKKLVQEGFIPTCMTYNCIIDGFV 584

Query: 380 QAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIE 439
           + G    A  ++ EM    V P++ TY  LI+G CK+N +  A+K+   ++    E  + 
Sbjct: 585 KEGSVNSALAVYTEMCKIGVSPNVFTYTNLINGFCKSNNMDLALKVMDEMKNKGIELDVT 644

Query: 440 IFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYM 499
           ++  LIDG C+ G + NA +L  +L + GL P  V YS MI G  +   +E A      M
Sbjct: 645 VYCALIDGFCRKGDMVNASQLLSELQEVGLSPNKVVYSSMISGFRKLQNMEAALHLHKRM 704

Query: 500 EKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDE 559
              G   ++  + TL+ G L+  K     EL  +M    + ++PD  T+S+++  L    
Sbjct: 705 INEGIPCDLQIYTTLISGLLKEGKLLFASELYAEML--AKGIMPDLITYSVLIHGLCNKG 762

Query: 560 KYHECSAVSKSSYRACLYVTIF 581
           +      + +   R C+  T+F
Sbjct: 763 QLENAQKILEDMDRKCMTPTVF 784



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 139/476 (29%), Positives = 239/476 (50%), Gaps = 51/476 (10%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CK+G  N+++A   +  M +   SP + + N L     K R  +     + + V+ G+  
Sbjct: 375 CKNG--NMDKAYEIYNQMKNKDISPTVFNVNSLIRGYLKARSPEEASKLFDEAVACGI-A 431

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           +  T N L++        LC E ++ EA  +++ M+  GVRP V++Y  +I G C+ G++
Sbjct: 432 NVFTYNSLLSW-------LCKEGKMSEACSIWEKMVRKGVRPSVVSYNNMILGHCQQGDM 484

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
             A  +  +M+    E GL  K N+ +YS+++D   K+G  + A  L+  M+G  I P+ 
Sbjct: 485 DSANGVFVEML----EKGL--KPNLITYSVLMDGYFKKGDTEYAFGLYDRMRGENIAPSD 538

Query: 229 VVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLEL 288
             C  +I+G C AG   E      +++  G  P  +T+N +ID   K G +N A  +   
Sbjct: 539 FTCNIIINGLCKAGRTSESQDRLKKLVQEGFIPTCMTYNCIIDGFVKEGSVNSALAVYTE 598

Query: 289 MIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYC---- 344
           M + G++P+ FTY +L++G+C    +D A ++   M +KG +  V  Y  LI+G+C    
Sbjct: 599 MCKIGVSPNVFTYTNLINGFCKSNNMDLALKVMDEMKNKGIELDVTVYCALIDGFCRKGD 658

Query: 345 -------------------------------KILNVEEAMSLYRQIISNGVRQTVITYNT 373
                                          K+ N+E A+ L++++I+ G+   +  Y T
Sbjct: 659 MVNASQLLSELQEVGLSPNKVVYSSMISGFRKLQNMEAALHLHKRMINEGIPCDLQIYTT 718

Query: 374 LLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNK 433
           L+SGL + G+  +A +L+ EM    + PDL TY++LI GLC    ++ A K+   ++   
Sbjct: 719 LISGLLKEGKLLFASELYAEMLAKGIMPDLITYSVLIHGLCNKGQLENAQKILEDMDRKC 778

Query: 434 FEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKL 489
               + I+N LI G  K G L  A+ L +++  KGLVP   TY I+++G  + G L
Sbjct: 779 MTPTVFIYNTLITGHFKEGNLQEAFRLHNEMLDKGLVPDDTTYDILVNGKVKDGNL 834



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 150/538 (27%), Positives = 262/538 (48%), Gaps = 19/538 (3%)

Query: 16  VSKVKLSSLFKSPRQIAAVSSPETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPI 75
           V  V ++ L +S R++   S      N  L+   K+  IN  +A   F  +      P +
Sbjct: 133 VPSVVVARLIESSRRLDFESDSRV-FNYLLNSYVKTKRIN--DAVDCFNSLIEKDIVPCL 189

Query: 76  SSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKE 135
           +  N+    + KN         Y K+ S G+  D  T++++I       R    E +++E
Sbjct: 190 TVMNIFLSELVKNNMIREARDVYNKMASKGVKGDCATISVMI-------RASMREGKLEE 242

Query: 136 ATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFS 195
           A   F+     GV  D   Y  +I   C+  +   AL L ++M     + G +    IF+
Sbjct: 243 AEGWFREAKNKGVELDARAYSIVIEAVCKKPDSVAALGLLREM----RDKGWVPHEVIFT 298

Query: 196 YSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEML 255
              +I    K+G + +A ++  EM   G    VVV TTL+ G+C  G+ +    LF +M 
Sbjct: 299 R--VIGVCMKQGKMLEAVKVKGEMLSCGKPMNVVVATTLMKGYCKQGDLDSALELFDKMN 356

Query: 256 DLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRID 315
           + G  PN +T+ V+I+  CK G +++A  +   M  + ++P  F  NSL+ GY      +
Sbjct: 357 ENGICPNNVTYAVIIEWCCKNGNMDKAYEIYNQMKNKDISPTVFNVNSLIRGYLKARSPE 416

Query: 316 TAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLL 375
            A ++F    + G  + V +YN L++  CK   + EA S++ +++  GVR +V++YN ++
Sbjct: 417 EASKLFDEAVACGIAN-VFTYNSLLSWLCKEGKMSEACSIWEKMVRKGVRPSVVSYNNMI 475

Query: 376 SGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFE 435
            G  Q G    A  +F EM    ++P+L TY++L+DG  K    + A  L+  +      
Sbjct: 476 LGHCQQGDMDSANGVFVEMLEKGLKPNLITYSVLMDGYFKKGDTEYAFGLYDRMRGENIA 535

Query: 436 FGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDF 495
                 N +I+GLCKAGR   + +   KL Q+G +PT +TY+ +I G  ++G +  A   
Sbjct: 536 PSDFTCNIIINGLCKAGRTSESQDRLKKLVQEGFIPTCMTYNCIIDGFVKEGSVNSALAV 595

Query: 496 LLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
              M K G +PNV T+  L++GF ++N     ++++ +M    + +  D T +  ++D
Sbjct: 596 YTEMCKIGVSPNVFTYTNLINGFCKSNNMDLALKVMDEMK--NKGIELDVTVYCALID 651



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 116/436 (26%), Positives = 208/436 (47%), Gaps = 9/436 (2%)

Query: 132 RIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKT 191
           RI +A   F ++I   + P +      ++   +   +  A  ++ KM S         K 
Sbjct: 169 RINDAVDCFNSLIEKDIVPCLTVMNIFLSELVKNNMIREARDVYNKMASKGV------KG 222

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
           +  + S++I +  +EG +++A+  F E K +G+       + +I   C   +     GL 
Sbjct: 223 DCATISVMIRASMREGKLEEAEGWFREAKNKGVELDARAYSIVIEAVCKKPDSVAALGLL 282

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
            EM D G  P+ + F  +I    K GK+ EA  +   M+  G   +     +LM GYC  
Sbjct: 283 REMRDKGWVPHEVIFTRVIGVCMKQGKMLEAVKVKGEMLSCGKPMNVVVATTLMKGYCKQ 342

Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
           G +D+A E+F  M+  G     V+Y ++I   CK  N+++A  +Y Q+ +  +  TV   
Sbjct: 343 GDLDSALELFDKMNENGICPNNVTYAVIIEWCCKNGNMDKAYEIYNQMKNKDISPTVFNV 402

Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
           N+L+ G  +A     A KLFDE     +  ++ TYN L+  LCK   + EA  ++  +  
Sbjct: 403 NSLIRGYLKARSPEEASKLFDEAVACGI-ANVFTYNSLLSWLCKEGKMSEACSIWEKMVR 461

Query: 432 NKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEK 491
                 +  +N +I G C+ G +D+A  +F ++ +KGL P ++TYS+++ G  +KG  E 
Sbjct: 462 KGVRPSVVSYNNMILGHCQQGDMDSANGVFVEMLEKGLKPNLITYSVLMDGYFKKGDTEY 521

Query: 492 ANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIV 551
           A      M     AP+  T N +++G  +  +TS+  + L K+   +   +P   T++ +
Sbjct: 522 AFGLYDRMRGENIAPSDFTCNIIINGLCKAGRTSESQDRLKKLV--QEGFIPTCMTYNCI 579

Query: 552 VDLLAKDEKYHECSAV 567
           +D   K+   +   AV
Sbjct: 580 IDGFVKEGSVNSALAV 595



 Score = 98.6 bits (244), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 78/324 (24%), Positives = 138/324 (42%), Gaps = 38/324 (11%)

Query: 285 LLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYC 344
           L+E   +     D   +N L++ Y    RI+ A + F S+  K     +   NI ++   
Sbjct: 141 LIESSRRLDFESDSRVFNYLLNSYVKTKRINDAVDCFNSLIEKDIVPCLTVMNIFLSELV 200

Query: 345 KILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLS 404
           K   + EA  +Y ++ S GV+    T + ++    + G+   A+  F E K   VE D  
Sbjct: 201 KNNMIREARDVYNKMASKGVKGDCATISVMIRASMREGKLEEAEGWFREAKNKGVELDAR 260

Query: 405 TYNILIDGLCKNNCVQEAVKLFH--------------------------MLEMNKFE--- 435
            Y+I+I+ +CK      A+ L                            MLE  K +   
Sbjct: 261 AYSIVIEAVCKKPDSVAALGLLREMRDKGWVPHEVIFTRVIGVCMKQGKMLEAVKVKGEM 320

Query: 436 ------FGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKL 489
                   + +   L+ G CK G LD+A ELF K+ + G+ P  VTY+++I   C+ G +
Sbjct: 321 LSCGKPMNVVVATTLMKGYCKQGDLDSALELFDKMNENGICPNNVTYAVIIEWCCKNGNM 380

Query: 490 EKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFS 549
           +KA +    M+    +P V   N+L+ G+L+     +  +L     E     + +  T++
Sbjct: 381 DKAYEIYNQMKNKDISPTVFNVNSLIRGYLKARSPEEASKLFD---EAVACGIANVFTYN 437

Query: 550 IVVDLLAKDEKYHECSAVSKSSYR 573
            ++  L K+ K  E  ++ +   R
Sbjct: 438 SLLSWLCKEGKMSEACSIWEKMVR 461



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 39/179 (21%), Positives = 79/179 (44%), Gaps = 2/179 (1%)

Query: 389 KLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGL 448
           +L +  +  + E D   +N L++   K   + +AV  F+ L        + + N  +  L
Sbjct: 140 RLIESSRRLDFESDSRVFNYLLNSYVKTKRINDAVDCFNSLIEKDIVPCLTVMNIFLSEL 199

Query: 449 CKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNV 508
            K   +  A ++++K+  KG+     T S+MI    R+GKLE+A  +    +  G   + 
Sbjct: 200 VKNNMIREARDVYNKMASKGVKGDCATISVMIRASMREGKLEEAEGWFREAKNKGVELDA 259

Query: 509 VTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAV 567
             ++ ++    +   +   + LL +M   ++  VP +  F+ V+ +  K  K  E   V
Sbjct: 260 RAYSIVIEAVCKKPDSVAALGLLREMR--DKGWVPHEVIFTRVIGVCMKQGKMLEAVKV 316


>gi|449451896|ref|XP_004143696.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Cucumis sativus]
          Length = 1032

 Score =  240 bits (613), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 175/598 (29%), Positives = 273/598 (45%), Gaps = 77/598 (12%)

Query: 35  SSPETQLN--EFLHENCKSGII---NLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNR 89
           S P + LN   F +     G I   N+ EA      M        + ++N + G +AK  
Sbjct: 336 SMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAG 395

Query: 90  HYDAVISFYRKLVSIGLLPDFLTLNILINCFGN--------------KER---------- 125
                +S + +++  GL PD  T N+LI+ +                K R          
Sbjct: 396 EMAKAMSLFNEMLMAGLEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYS 455

Query: 126 ----GLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSG 181
               GLC  + +++A  +   MI  GV+P+V  YGTLI  + +     +A+ L K M++ 
Sbjct: 456 VLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIA- 514

Query: 182 DYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV------------- 228
              NG++   ++F Y+ +I  LC+   V++AK L ++M  +GI P               
Sbjct: 515 ---NGVLP--DLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKS 569

Query: 229 ----------------------VVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTF 266
                                 V+ T LI G C  GN  E    F  ML+ G  P++  +
Sbjct: 570 GEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAY 629

Query: 267 NVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHS 326
           + +I  L K GK  EA G+    ++ G+ PD F YNSL+ G+C  G I+ A +++  M  
Sbjct: 630 SAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLH 689

Query: 327 KGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGY 386
            G    +V YN LING CK+  V +A  L+ +I    +   V+TY+T++ G  ++G    
Sbjct: 690 NGINPNIVVYNTLINGLCKLGEVTKARELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTE 749

Query: 387 AQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLID 446
           A KLFDEM    + PD   Y ILIDG  K   +++A+ LFH  +  K    +  FN LID
Sbjct: 750 AFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQ-QKSVGSLSAFNSLID 808

Query: 447 GLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAP 506
             CK G++  A ELF  +  K L P +VTY+I+I    +   +E+A    L ME     P
Sbjct: 809 SFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIP 868

Query: 507 NVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHEC 564
           N +T+ +L+  + Q     K++ L   M    R +  D   + ++     K+ K  E 
Sbjct: 869 NTLTYTSLLLSYNQIGNRFKMISLFKDM--EARGIACDAIAYGVMASAYCKEGKSLEA 924



 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 156/593 (26%), Positives = 267/593 (45%), Gaps = 107/593 (18%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
           P + ++N   G + +    D  +   + ++  GL PD  T  +L++       G C + R
Sbjct: 274 PNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVD-------GFCKQKR 326

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVS------------ 180
            KEA  +F++M + G+ P+  TY  LI+GF + GN+  ALR+  +M++            
Sbjct: 327 SKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNA 386

Query: 181 ---GDYENGLISKT--------------NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRG 223
              G  + G ++K               + ++Y+++ID   K   + KA EL  EMK R 
Sbjct: 387 MIGGIAKAGEMAKAMSLFNEMLMAGLEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARK 446

Query: 224 INPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEAN 283
           + P+    + LI G C + + ++ N +  +M+  G +PN+  +  +I    +  +   A 
Sbjct: 447 LTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAI 506

Query: 284 GLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCK---HTV------- 333
            LL++MI  G+ PD F YN L+ G C   +++ A+ + + M  KG K   HT        
Sbjct: 507 ELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLY 566

Query: 334 -------------------------VSYNILINGYCKILNVEEAMSLYRQIISNGVRQTV 368
                                    V Y ILI G+C + N  EA+S ++ ++  G+   +
Sbjct: 567 SKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDI 626

Query: 369 ITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHM 428
             Y+ ++  L + G+   A  +F +     V PD+  YN LI G CK   +++A +L+  
Sbjct: 627 RAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDE 686

Query: 429 LEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGK 488
           +  N     I ++N LI+GLCK G +  A ELF ++ +K LVP VVTYS +I G C+ G 
Sbjct: 687 MLHNGINPNIVVYNTLINGLCKLGEVTKARELFDEIEEKDLVPDVVTYSTIIDGYCKSGN 746

Query: 489 LEKANDFLLYMEKNGCAPN----------------------------------VVTFNTL 514
           L +A      M   G +P+                                  +  FN+L
Sbjct: 747 LTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVGSLSAFNSL 806

Query: 515 MHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAV 567
           +  F ++ K  +  EL   M   ++ L P+  T++I++D   K E   E   +
Sbjct: 807 IDSFCKHGKVIEARELFDDMV--DKKLTPNIVTYTILIDAYGKAEMMEEAEQL 857



 Score =  221 bits (563), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 140/479 (29%), Positives = 236/479 (49%), Gaps = 14/479 (2%)

Query: 55  NLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLN 114
           +L +A      M      P +  +  L  A  +   Y+  I   + +++ G+LPD    N
Sbjct: 466 DLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYN 525

Query: 115 ILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRL 174
            LI        GLC   +++EA  L  +M   G++P+  TYG  IN + ++G + VA R 
Sbjct: 526 CLI-------IGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERY 578

Query: 175 HKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTL 234
            K M+S    +G++    I  Y+I+I   C  G   +A   F  M  +G+ P +   + +
Sbjct: 579 FKDMLS----SGIVPNNVI--YTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAI 632

Query: 235 IHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGL 294
           IH     G  +E  G+F++ L  G  P++  +N +I   CK G I +A+ L + M+  G+
Sbjct: 633 IHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGI 692

Query: 295 NPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMS 354
           NP+   YN+L++G C +G +  ARE+F  +  K     VV+Y+ +I+GYCK  N+ EA  
Sbjct: 693 NPNIVVYNTLINGLCKLGEVTKARELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAFK 752

Query: 355 LYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLC 414
           L+ ++IS G+      Y  L+ G  + G    A  LF E +  +V   LS +N LID  C
Sbjct: 753 LFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSV-GSLSAFNSLIDSFC 811

Query: 415 KNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVV 474
           K+  V EA +LF  +   K    I  +  LID   KA  ++ A +LF  +  + ++P  +
Sbjct: 812 KHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTL 871

Query: 475 TYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHK 533
           TY+ ++    + G   K       ME  G A + + +  +   + +  K+ + ++LL+K
Sbjct: 872 TYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNK 930



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 143/479 (29%), Positives = 221/479 (46%), Gaps = 86/479 (17%)

Query: 149 RPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGL 208
           +P++ TY   I G C+TG +  AL + K M+    E GL    +  +Y++++D  CK+  
Sbjct: 273 KPNLFTYNAFIGGLCQTGAVDEALEVKKLMM----EKGL--GPDGHTYTLLVDGFCKQKR 326

Query: 209 VDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNV 268
             +AK +F  M   G+NP     T LI GF   GN EE   +  EM+  G + N++T+N 
Sbjct: 327 SKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNA 386

Query: 269 MIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKG 328
           MI  + K G++ +A  L   M+  GL PD +TYN L+DGY     +  A E+   M ++ 
Sbjct: 387 MIGGIAKAGEMAKAMSLFNEMLMAGLEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARK 446

Query: 329 CKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQ 388
              +  +Y++LI+G C   ++++A  +  Q+I NGV+  V  Y TL+    Q  +   A 
Sbjct: 447 LTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAI 506

Query: 389 KLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIE--------- 439
           +L   M    V PDL  YN LI GLC+   V+EA     ML ++  E GI+         
Sbjct: 507 ELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEA----KMLLVDMGEKGIKPNAHTYGAF 562

Query: 440 ------------------------------IFNCLIDGLCKAGRLDNAWELFHKLPQKGL 469
                                         I+  LI G C  G    A   F  + +KGL
Sbjct: 563 INLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGL 622

Query: 470 VPTVVTYSIMIH-----------------------------------GLCRKGKLEKAND 494
           +P +  YS +IH                                   G C++G +EKA+ 
Sbjct: 623 IPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQ 682

Query: 495 FLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
               M  NG  PN+V +NTL++G  +  + +K  EL  ++   E++LVPD  T+S ++D
Sbjct: 683 LYDEMLHNGINPNIVVYNTLINGLCKLGEVTKARELFDEI--EEKDLVPDVVTYSTIID 739



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 138/473 (29%), Positives = 235/473 (49%), Gaps = 26/473 (5%)

Query: 44   FLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDA-----VISFY 98
            F++   KSG I + E RYF   +     S  I   N+++  + K  H D       +S +
Sbjct: 562  FINLYSKSGEIQVAE-RYFKDML-----SSGIVPNNVIYTILIKG-HCDVGNTVEALSTF 614

Query: 99   RKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTL 158
            + ++  GL+PD    + +I+        L    + KEA  +F   +  GV PDV  Y +L
Sbjct: 615  KCMLEKGLIPDIRAYSAIIH-------SLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSL 667

Query: 159  INGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLE 218
            I+GFC+ G++  A +L+ +M+     NG+    NI  Y+ +I+ LCK G V KA+ELF E
Sbjct: 668  ISGFCKEGDIEKASQLYDEML----HNGI--NPNIVVYNTLINGLCKLGEVTKARELFDE 721

Query: 219  MKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGK 278
            ++ + + P VV  +T+I G+C +GN  E   LF EM+  G  P+   + ++ID   K G 
Sbjct: 722  IEEKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGN 781

Query: 279  INEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNI 338
            + +A  L     Q+ +      +NSL+D +C  G++  ARE+F  M  K     +V+Y I
Sbjct: 782  LEKALSLFHEAQQKSVGS-LSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTI 840

Query: 339  LINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYN 398
            LI+ Y K   +EEA  L+  + +  +    +TY +LL    Q G       LF +M+   
Sbjct: 841  LIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARG 900

Query: 399  VEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAW 458
            +  D   Y ++    CK     EA+KL +   +   +   ++F+ LI  LCK  ++    
Sbjct: 901  IACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDVFDALIFHLCKEKQISTVL 960

Query: 459  ELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTF 511
            EL  ++ ++ L  +  T + ++ G  + G  ++A+  L  M++ G  P  ++ 
Sbjct: 961  ELLSEMGKEELSLSSKTCNTLLLGFYKSGNEDEASKVLGVMQRLGWVPTSLSL 1013



 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 122/425 (28%), Positives = 212/425 (49%), Gaps = 44/425 (10%)

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
           + EA+ +F   I+ G  P +I    L+    +   + +  +++  MV    E  ++   +
Sbjct: 188 LNEASSVFIASISEGFFPTLICCNNLMRDLLKANMMGLFWKVYGSMV----EAKIVP--D 241

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
           +++Y+ +I + CK G V K K +  EM+                   C            
Sbjct: 242 VYTYTNVIKAHCKVGDVIKGKMVLSEMEKE-----------------C------------ 272

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
                  +PNL T+N  I  LC+ G ++EA  + +LM+++GL PD  TY  L+DG+C   
Sbjct: 273 -------KPNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQK 325

Query: 313 RIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYN 372
           R   A+ IF SM S G      +Y  LI+G+ K  N+EEA+ +  ++I+ G++  V+TYN
Sbjct: 326 RSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYN 385

Query: 373 TLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMN 432
            ++ G+ +AG+   A  LF+EM +  +EPD  TYN+LIDG  K++ + +A +L   ++  
Sbjct: 386 AMIGGIAKAGEMAKAMSLFNEMLMAGLEPDTWTYNLLIDGYLKSHDMAKACELLAEMKAR 445

Query: 433 KFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKA 492
           K       ++ LI GLC +  L  A E+  ++ + G+ P V  Y  +I    ++ + E A
Sbjct: 446 KLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMA 505

Query: 493 NDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVV 552
            + L  M  NG  P++  +N L+ G  +  K  +   LL  M   E+ + P+  T+   +
Sbjct: 506 IELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMG--EKGIKPNAHTYGAFI 563

Query: 553 DLLAK 557
           +L +K
Sbjct: 564 NLYSK 568



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 102/394 (25%), Positives = 174/394 (44%), Gaps = 21/394 (5%)

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
           + SYSI+   LC  GL+ +A  + LE   +   P + +  +L+    C   + E  G   
Sbjct: 120 LHSYSILAIRLCNSGLIHQADNM-LEKLLQTRKPPLEILDSLVR---C---YREFGG--- 169

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
                    NL  F++ ID     G +NEA+ +    I  G  P     N+LM       
Sbjct: 170 --------SNLTVFDIFIDKFRVLGFLNEASSVFIASISEGFFPTLICCNNLMRDLLKAN 221

Query: 313 RIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYN 372
            +    +++ SM        V +Y  +I  +CK+ +V +   +  + +    +  + TYN
Sbjct: 222 MMGLFWKVYGSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSE-MEKECKPNLFTYN 280

Query: 373 TLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMN 432
             + GL Q G    A ++   M    + PD  TY +L+DG CK    +EA  +F  +  +
Sbjct: 281 AFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSS 340

Query: 433 KFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKA 492
                   +  LIDG  K G ++ A  +  ++  +GL   VVTY+ MI G+ + G++ KA
Sbjct: 341 GLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKA 400

Query: 493 NDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVV 552
                 M   G  P+  T+N L+ G+L+++  +K  ELL +M    R L P   T+S+++
Sbjct: 401 MSLFNEMLMAGLEPDTWTYNLLIDGYLKSHDMAKACELLAEM--KARKLTPSPFTYSVLI 458

Query: 553 DLLAKDEKYHECSAVSKSSYRACLYVTIFQPSSL 586
             L       + + V     R  +   +F   +L
Sbjct: 459 SGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTL 492


>gi|414875533|tpg|DAA52664.1| TPA: hypothetical protein ZEAMMB73_493958 [Zea mays]
          Length = 688

 Score =  240 bits (613), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 147/493 (29%), Positives = 243/493 (49%), Gaps = 18/493 (3%)

Query: 63  FGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGN 122
           F  M     +P +   N +  A+     +D + + + +++ +G+ P  +T N L++ F  
Sbjct: 157 FREMASHGVAPDVKDCNHVLRALRDAARWDDICAVHEEMLQLGIEPSIVTYNTLLDSFLK 216

Query: 123 KERGLCVENRIKEATWLFKNM--IAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVS 180
                  E R  +   L K M     G  P+ +TY  +I G  R G+L  A  L + M  
Sbjct: 217 -------EGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGM-- 267

Query: 181 GDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCC 240
                 L  K + F+Y+ +I  L   G V K  +L LEM+  GI P VV    +IHG   
Sbjct: 268 -----RLSKKASSFTYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQ 322

Query: 241 AGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFT 300
           +G  E     F EM  +G  P+++T+N +++  CK G + EA  L   + + GL P   T
Sbjct: 323 SGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLT 382

Query: 301 YNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQII 360
           YN  +DGYC +G ++ AR +   M  +GC   V +Y IL+ G   + ++  A   + +++
Sbjct: 383 YNIRIDGYCRLGDLEEARILKEEMGEQGCLPNVCTYTILMKGSLNVCSLAMAREFFDEML 442

Query: 361 SNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQ 420
           S G++     YNT +      G    A +L + + L  +  D  TYNILI GLCK   ++
Sbjct: 443 SKGLQPDCFAYNTRICAELILGDIARALELREVLMLEGISSDTVTYNILIHGLCKTGNLK 502

Query: 421 EAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMI 480
           +A +L   +  N  +     + CLI   C+ G L  A ++F+ +   GL+P+ VT++++I
Sbjct: 503 DAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLREARKIFNNMISDGLLPSAVTFTVII 562

Query: 481 HGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERN 540
           H  CR+G L  A  +   M + G  PN +T+N L+H   +  +T       H+M   ER 
Sbjct: 563 HAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLASHHFHEML--ERG 620

Query: 541 LVPDDTTFSIVVD 553
           LV +  T+++++D
Sbjct: 621 LVANKYTYTLLID 633



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 105/345 (30%), Positives = 173/345 (50%), Gaps = 7/345 (2%)

Query: 216 FLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCK 275
           F EM   G+ P V  C  ++     A  W+++  +  EML LG  P+++T+N ++D   K
Sbjct: 157 FREMASHGVAPDVKDCNHVLRALRDAARWDDICAVHEEMLQLGIEPSIVTYNTLLDSFLK 216

Query: 276 GGKINEANGLLELMIQRGLN--PDRFTYNSLMDGYCLVGRIDTAREIFLSMH-SKGCKHT 332
            G+ ++   LL+ M  RG    P+  TYN ++ G    G ++ A E+   M  SK  K +
Sbjct: 217 EGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGMRLSK--KAS 274

Query: 333 VVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFD 392
             +YN LI G      V++   L  ++ + G+  TV+TYN ++ GL Q+G    AQ  F 
Sbjct: 275 SFTYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKFA 334

Query: 393 EMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAG 452
           EM+   + PD+ TYN L++G CK   ++EA+ LF  L        +  +N  IDG C+ G
Sbjct: 335 EMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNIRIDGYCRLG 394

Query: 453 RLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFN 512
            L+ A  L  ++ ++G +P V TY+I++ G      L  A +F   M   G  P+   +N
Sbjct: 395 DLEEARILKEEMGEQGCLPNVCTYTILMKGSLNVCSLAMAREFFDEMLSKGLQPDCFAYN 454

Query: 513 TLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAK 557
           T +   L     ++ +EL   +      +  D  T++I++  L K
Sbjct: 455 TRICAELILGDIARALELREVLM--LEGISSDTVTYNILIHGLCK 497



 Score = 82.4 bits (202), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 61/238 (25%), Positives = 106/238 (44%), Gaps = 40/238 (16%)

Query: 353 MSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILID- 411
           +S +R++ S+GV   V   N +L  L  A +      + +EM    +EP + TYN L+D 
Sbjct: 154 LSAFREMASHGVAPDVKDCNHVLRALRDAARWDDICAVHEEMLQLGIEPSIVTYNTLLDS 213

Query: 412 ------------------------------------GLCKNNCVQEAVKLFHMLEMNKFE 435
                                               GL +   ++EA +L   + ++K  
Sbjct: 214 FLKEGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGMRLSKKA 273

Query: 436 FGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDF 495
                +N LI GL   G +   ++L  ++  +G++PTVVTY+ MIHGL + G +E A   
Sbjct: 274 SSF-TYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVK 332

Query: 496 LLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
              M   G  P+V+T+N+L++G+ +     + + L   +      L P   T++I +D
Sbjct: 333 FAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRA--GLAPTVLTYNIRID 388



 Score = 62.4 bits (150), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 40/144 (27%), Positives = 72/144 (50%), Gaps = 13/144 (9%)

Query: 44  FLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVS 103
            +H +C+ G+  L EAR  F  M      P   +F ++  A  +  +  +   ++RK++ 
Sbjct: 526 LIHAHCERGL--LREARKIFNNMISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLE 583

Query: 104 IGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFC 163
            G+ P+ +T N+LI+        LC   R + A+  F  M+  G+  +  TY  LI+G C
Sbjct: 584 EGVEPNEITYNVLIH-------ALCRMGRTQLASHHFHEMLERGLVANKYTYTLLIDGNC 636

Query: 164 RTGNLSVALRLHKKMVSGDYENGL 187
           + GN   A+R + +M    ++NG+
Sbjct: 637 KVGNWEDAMRFYFEM----HQNGI 656


>gi|449521772|ref|XP_004167903.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g61400-like [Cucumis sativus]
          Length = 645

 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 144/459 (31%), Positives = 231/459 (50%), Gaps = 26/459 (5%)

Query: 75  ISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIK 134
           I + N+L   + K   ++ +   Y +++S GL P  +T   LI+       G C +  + 
Sbjct: 147 IQACNVLLYVLVKTGRFELLWRIYEEMISNGLSPSVITFGTLID-------GCCRQGDLL 199

Query: 135 EATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIF 194
            A  +F  M   G+ P VI Y  LI G C    +  A  +H+ M     E G+    N++
Sbjct: 200 RAQEMFDEMRVKGIVPTVIVYTILIRGLCSDNKIEEAESMHRAM----REVGVYP--NVY 253

Query: 195 SYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEM 254
           +Y+ ++D  CK     +A  L+ +M G G+ P VV    LI G C  G  +    LF+ M
Sbjct: 254 TYNTLMDGYCKLANAKQALRLYQDMLGEGLVPDVVTFGILIDGLCKFGEMKAARNLFVNM 313

Query: 255 LDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRI 314
           +     PN+  +N +ID  CK G ++EA  L   + +  ++PD FTY+ L+ G C V R 
Sbjct: 314 IKFSVTPNIAVYNSLIDAYCKVGDVSEAMALFLELERFEVSPDVFTYSILIRGLCSVSRT 373

Query: 315 DTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTL 374
           + A  IF  M  +G     V+YN LI+G CK   +++A+ +  Q+  NGV   VIT++TL
Sbjct: 374 EEAGNIFEKMTKEGILANSVTYNSLIDGCCKEGKMDKALEICSQMTENGVEPNVITFSTL 433

Query: 375 LSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKF 434
           + G  +      A  ++ EM + ++ PD+ TY  +IDG CK   ++EA+KL+  +  N  
Sbjct: 434 IDGYCKIRNLQAAMGIYSEMVIKSLSPDVVTYTAMIDGHCKYGSMKEALKLYSDMLDNGI 493

Query: 435 EFGIEIFNCLIDGLCKAGRLDNAWELFHK----------LPQKGLVPTV---VTYSIMIH 481
                  +CL+DGLCK G++ +A ELF +          +   G  P++   V Y+ +IH
Sbjct: 494 TPNCYTISCLLDGLCKDGKISDALELFTEKIEFQTPRCNVDAGGSKPSLTNHVAYTALIH 553

Query: 482 GLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQ 520
           GLC+ G+  KA      M + G  P+ V +  ++ G  Q
Sbjct: 554 GLCQDGQFSKAVKLFSDMRRYGLQPDEVIYVVMLRGLFQ 592



 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 132/419 (31%), Positives = 216/419 (51%), Gaps = 9/419 (2%)

Query: 118 NCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKK 177
           N +G     LC    ++EA  ++  +   G    +     L+    +TG   +  R++++
Sbjct: 116 NVYGELIIVLCKMELVEEALSMYHKV---GAALTIQACNVLLYVLVKTGRFELLWRIYEE 172

Query: 178 MVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHG 237
           M+S    NGL    ++ ++  +ID  C++G + +A+E+F EM+ +GI P V+V T LI G
Sbjct: 173 MIS----NGL--SPSVITFGTLIDGCCRQGDLLRAQEMFDEMRVKGIVPTVIVYTILIRG 226

Query: 238 FCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPD 297
            C     EE   +   M ++G  PN+ T+N ++D  CK     +A  L + M+  GL PD
Sbjct: 227 LCSDNKIEEAESMHRAMREVGVYPNVYTYNTLMDGYCKLANAKQALRLYQDMLGEGLVPD 286

Query: 298 RFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYR 357
             T+  L+DG C  G +  AR +F++M        +  YN LI+ YCK+ +V EAM+L+ 
Sbjct: 287 VVTFGILIDGLCKFGEMKAARNLFVNMIKFSVTPNIAVYNSLIDAYCKVGDVSEAMALFL 346

Query: 358 QIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNN 417
           ++    V   V TY+ L+ GL    +   A  +F++M    +  +  TYN LIDG CK  
Sbjct: 347 ELERFEVSPDVFTYSILIRGLCSVSRTEEAGNIFEKMTKEGILANSVTYNSLIDGCCKEG 406

Query: 418 CVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYS 477
            + +A+++   +  N  E  +  F+ LIDG CK   L  A  ++ ++  K L P VVTY+
Sbjct: 407 KMDKALEICSQMTENGVEPNVITFSTLIDGYCKIRNLQAAMGIYSEMVIKSLSPDVVTYT 466

Query: 478 IMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAE 536
            MI G C+ G +++A      M  NG  PN  T + L+ G  ++ K S  +EL  +  E
Sbjct: 467 AMIDGHCKYGSMKEALKLYSDMLDNGITPNCYTISCLLDGLCKDGKISDALELFTEKIE 525



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 119/438 (27%), Positives = 199/438 (45%), Gaps = 69/438 (15%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           C+ G  +L  A+  F  M      P +  + +L   +  +   +   S +R +  +G+ P
Sbjct: 193 CRQG--DLLRAQEMFDEMRVKGIVPTVIVYTILIRGLCSDNKIEEAESMHRAMREVGVYP 250

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           +  T N L++       G C     K+A  L+++M+  G+ PDV+T+G LI+G C+ G +
Sbjct: 251 NVYTYNTLMD-------GYCKLANAKQALRLYQDMLGEGLVPDVVTFGILIDGLCKFGEM 303

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
             A  L   M+            NI  Y+ +ID+ CK G V +A  LFLE++   ++P V
Sbjct: 304 KAARNLFVNMIK------FSVTPNIAVYNSLIDAYCKVGDVSEAMALFLELERFEVSPDV 357

Query: 229 VVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLEL 288
              + LI G C     EE   +F +M   G   N +T+N +ID  CK GK+++A  +   
Sbjct: 358 FTYSILIRGLCSVSRTEEAGNIFEKMTKEGILANSVTYNSLIDGCCKEGKMDKALEICSQ 417

Query: 289 MIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILN 348
           M + G+ P+  T+++L+DGYC +  +  A  I+  M  K     VV+Y  +I+G+CK  +
Sbjct: 418 MTENGVEPNVITFSTLIDGYCKIRNLQAAMGIYSEMVIKSLSPDVVTYTAMIDGHCKYGS 477

Query: 349 VEEAMSLYRQIISNGVRQTVIT-------------------------------------- 370
           ++EA+ LY  ++ NG+     T                                      
Sbjct: 478 MKEALKLYSDMLDNGITPNCYTISCLLDGLCKDGKISDALELFTEKIEFQTPRCNVDAGG 537

Query: 371 ----------YNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQ 420
                     Y  L+ GL Q GQ   A KLF +M+ Y ++PD   Y +++ GL       
Sbjct: 538 SKPSLTNHVAYTALIHGLCQDGQFSKAVKLFSDMRRYGLQPDEVIYVVMLRGLF------ 591

Query: 421 EAVKLFHMLEMNKFEFGI 438
           +   +  ML  +  +FG+
Sbjct: 592 QVKYILMMLHADMLKFGV 609



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 90/343 (26%), Positives = 160/343 (46%), Gaps = 26/343 (7%)

Query: 240 CAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQ-------- 291
           C   W+      +E  +  P  N+  ++ +I  L     ++ A  LL  ++Q        
Sbjct: 40  CRSPWKA-----LEFFNAAPEKNIQLYSAIIHVLVGSKLLSHARYLLNDLVQNLVKSHKP 94

Query: 292 -----------RGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILI 340
                        L   +FT N   +   ++ +++   E     H  G   T+ + N+L+
Sbjct: 95  YHACQLAFSELSRLKSSKFTPNVYGELIIVLCKMELVEEALSMYHKVGAALTIQACNVLL 154

Query: 341 NGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVE 400
               K    E    +Y ++ISNG+  +VIT+ TL+ G  + G    AQ++FDEM++  + 
Sbjct: 155 YVLVKTGRFELLWRIYEEMISNGLSPSVITFGTLIDGCCRQGDLLRAQEMFDEMRVKGIV 214

Query: 401 PDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWEL 460
           P +  Y ILI GLC +N ++EA  +   +        +  +N L+DG CK      A  L
Sbjct: 215 PTVIVYTILIRGLCSDNKIEEAESMHRAMREVGVYPNVYTYNTLMDGYCKLANAKQALRL 274

Query: 461 FHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQ 520
           +  +  +GLVP VVT+ I+I GLC+ G+++ A +  + M K    PN+  +N+L+  + +
Sbjct: 275 YQDMLGEGLVPDVVTFGILIDGLCKFGEMKAARNLFVNMIKFSVTPNIAVYNSLIDAYCK 334

Query: 521 NNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
               S+ + L  ++   E  + PD  T+SI++  L    +  E
Sbjct: 335 VGDVSEAMALFLELERFE--VSPDVFTYSILIRGLCSVSRTEE 375



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 41/182 (22%), Positives = 86/182 (47%), Gaps = 7/182 (3%)

Query: 407 NILIDGLCKNNCVQEAVKLF--HMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKL 464
           N L+  L K++    A +L    +  +   +F   ++  LI  LCK   ++ A  ++HK+
Sbjct: 82  NDLVQNLVKSHKPYHACQLAFSELSRLKSSKFTPNVYGELIIVLCKMELVEEALSMYHKV 141

Query: 465 PQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKT 524
              G   T+   +++++ L + G+ E        M  NG +P+V+TF TL+ G  +    
Sbjct: 142 ---GAALTIQACNVLLYVLVKTGRFELLWRIYEEMISNGLSPSVITFGTLIDGCCRQGDL 198

Query: 525 SKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKSSYRACLYVTIFQPS 584
            +  E+  +M    + +VP    ++I++  L  D K  E  ++ ++     +Y  ++  +
Sbjct: 199 LRAQEMFDEMRV--KGIVPTVIVYTILIRGLCSDNKIEEAESMHRAMREVGVYPNVYTYN 256

Query: 585 SL 586
           +L
Sbjct: 257 TL 258


>gi|297802850|ref|XP_002869309.1| hypothetical protein ARALYDRAFT_491552 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297315145|gb|EFH45568.1| hypothetical protein ARALYDRAFT_491552 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1114

 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 151/487 (31%), Positives = 257/487 (52%), Gaps = 15/487 (3%)

Query: 77  SFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEA 136
           S+N L   + K+R     +  YR+++  G  P   T + L+   G +         I+  
Sbjct: 192 SYNGLIHLLLKSRFCTEAMEVYRRMILDGFRPSLQTYSSLMVGLGKRRD-------IESV 244

Query: 137 TWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSY 196
             L K M   G++P+V T+   I    R G ++ A  + K+M   D E       ++ +Y
Sbjct: 245 MGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRM---DDEG---CGPDVVTY 298

Query: 197 SIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLD 256
           +++ID+LC    +D AKE+F +MK     P  V   TL+  F    + + VN  + EM  
Sbjct: 299 TVLIDALCTARKLDCAKEVFAKMKTGRHKPDRVTYITLLDRFSDNRDLDSVNQFWSEMEK 358

Query: 257 LGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDT 316
            G  P+++TF +++D LCK G   EA   L++M  +G+ P+  TYN+L+ G   V R+D 
Sbjct: 359 DGHVPDVVTFTILVDALCKAGNFGEAFAKLDVMRDQGILPNLHTYNTLICGLLRVHRLDD 418

Query: 317 AREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLS 376
           A EIF +M S G K T  +Y + I+ Y K  +   A+  + ++ + G+   ++  N  L 
Sbjct: 419 ALEIFDNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLY 478

Query: 377 GLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEF 436
            L +AG+   A+++F  +K   + PD  TYN+++    K   + EA+KL   +  N  E 
Sbjct: 479 SLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMVENCCEP 538

Query: 437 GIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFL 496
            + + N LI+ L KA R+D AW++F ++ +  L PTVVTY+ ++ GL + GK+++A +  
Sbjct: 539 DVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELF 598

Query: 497 LYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLA 556
             M + GC PN +TFNTL     +N++ +  +++L KM   +   VPD  T++ ++  L 
Sbjct: 599 EGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMM--DMGCVPDVFTYNTIIFGLV 656

Query: 557 KDEKYHE 563
           K+ +  E
Sbjct: 657 KNGQVKE 663



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 158/576 (27%), Positives = 253/576 (43%), Gaps = 91/576 (15%)

Query: 56  LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNI 115
           L+ A+  F  M   +  P   ++  L    + NR  D+V  F+ ++   G +PD +T  I
Sbjct: 311 LDCAKEVFAKMKTGRHKPDRVTYITLLDRFSDNRDLDSVNQFWSEMEKDGHVPDVVTFTI 370

Query: 116 LINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLH 175
           L++        LC      EA      M   G+ P++ TY TLI G  R   L  AL + 
Sbjct: 371 LVD-------ALCKAGNFGEAFAKLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALEIF 423

Query: 176 KKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLI 235
             M S      L  K   ++Y + ID   K G    A E F +MK +GI P +V C   +
Sbjct: 424 DNMES------LGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASL 477

Query: 236 HGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLN 295
           +    AG   E   +F  + D+G  P+ +T+N+M+ C  K G+I+EA  LL  M++    
Sbjct: 478 YSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMVENCCE 537

Query: 296 PDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSL 355
           PD    NSL++      R+D A ++F+ M     K TVV+YN L+ G  K   ++EA+ L
Sbjct: 538 PDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIEL 597

Query: 356 YRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCK 415
           +  ++  G     IT+NTL   L +  +   A K+  +M      PD+ TYN +I GL K
Sbjct: 598 FEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVK 657

Query: 416 NNCVQEAVKLFHMLEMNKFEFGIEIFNC-LIDGLCKAGRLDNA----------------- 457
           N  V+EA+  FH  +M K  +   +  C L+ G+ KAG +++A                 
Sbjct: 658 NGQVKEAMCFFH--QMKKLVYPDFVTLCTLLPGVVKAGLIEDAYKIIANFLYSCADQPAN 715

Query: 458 --WE-LFHKLPQKGLVPTVVTYS--IMIHGLCRKGK------------------------ 488
             WE L   +  +  +   V++S  ++ +G+CR G                         
Sbjct: 716 LFWEDLMGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSFKHNNASGARMLFE 775

Query: 489 ---------------------------LEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQN 521
                                      +E A D  L ++  GC P+V T+N L+  + ++
Sbjct: 776 KFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKNTGCIPDVATYNFLLDAYGKS 835

Query: 522 NKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAK 557
            K  ++ E+  +M+  E    P+  T +IV+  L K
Sbjct: 836 GKIDELFEIYKEMSAHECE--PNTITHNIVISGLVK 869



 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 161/603 (26%), Positives = 258/603 (42%), Gaps = 100/603 (16%)

Query: 19   VKLSSLFKSPRQIAAVSSPETQLNEFLHENCKSGIINLN-------------EARYFFGY 65
            V  + + K   ++  +      L+E +   C+  +I +N             EA   F  
Sbjct: 506  VTYNMMMKCYSKVGEIDEAIKLLSEMVENCCEPDVIVVNSLINTLYKADRVDEAWKMFMR 565

Query: 66   MTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKER 125
            M  M+  P + ++N L   + KN      I  +  +V  G  P+ +T N L +C      
Sbjct: 566  MKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDC------ 619

Query: 126  GLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVAL---RLHKKMVSGD 182
             LC  + +  A  +   M+  G  PDV TY T+I G  + G +  A+      KK+V  D
Sbjct: 620  -LCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYPD 678

Query: 183  Y-----------ENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLE------MKGRGIN 225
            +           + GLI      +Y II + L      D+   LF E      +   GI+
Sbjct: 679  FVTLCTLLPGVVKAGLIED----AYKIIANFL--YSCADQPANLFWEDLMGSILAEAGID 732

Query: 226  PAVVVCTTLI-HGFCCAGN----------WEEVNGLFIEML------DLGPRPNLLTFNV 268
             AV     L+ +G C  G+          ++  N     ML      DLG +P L T+N+
Sbjct: 733  NAVSFSERLVANGICRDGDSILVPIIRYSFKHNNASGARMLFEKFTKDLGVQPKLPTYNL 792

Query: 269  MIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKG 328
            +I  L +   I  A  +   +   G  PD  TYN L+D Y   G+ID   EI+  M +  
Sbjct: 793  LIGGLLEADMIEIAQDVFLQVKNTGCIPDVATYNFLLDAYGKSGKIDELFEIYKEMSAHE 852

Query: 329  CKHTVVSYNILINGYCKILNVEEAMSLYRQIISN-GVRQTVITYNTLLSGLFQAGQAGYA 387
            C+   +++NI+I+G  K  NV++A+ LY  ++S+     T  TY  L+ GL ++G+   A
Sbjct: 853  CEPNTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEA 912

Query: 388  QKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDG 447
            ++LF+ M  Y   P+ + YNILI+G  K      A  LF  +        ++ ++ L+D 
Sbjct: 913  KQLFEGMSDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDC 972

Query: 448  LCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKA--------------N 493
            LC  GR+D     F +L + GL P VV Y+++I+GL +  +LE+A               
Sbjct: 973  LCMVGRVDEGLHYFRELKESGLNPDVVCYNLIINGLGKFHRLEEALVLFNEMKKSRGITP 1032

Query: 494  DFLLY----------------------MEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELL 531
            D   Y                      +++ G  PNV TFN L+ G+  + K      + 
Sbjct: 1033 DLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVY 1092

Query: 532  HKM 534
              M
Sbjct: 1093 QTM 1095



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 153/580 (26%), Positives = 274/580 (47%), Gaps = 60/580 (10%)

Query: 49   CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
            C S +  ++EA      M      P +   N L   + K    D     + ++  + L P
Sbjct: 514  CYSKVGEIDEAIKLLSEMVENCCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKP 573

Query: 109  DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
              +T N L+        GL    +I+EA  LF+ M+  G  P+ IT+ TL +  C+   +
Sbjct: 574  TVVTYNTLL-------AGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEV 626

Query: 169  SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
            ++AL++  KM+    + G +   ++F+Y+ II  L K G V +A   F +MK + + P  
Sbjct: 627  TLALKMLFKMM----DMGCVP--DVFTYNTIIFGLVKNGQVKEAMCFFHQMK-KLVYPDF 679

Query: 229  VVCTTLIHG------------------FCCAGN-----WEEVNGLFIEMLDLGPRPNLLT 265
            V   TL+ G                  + CA       WE++ G    +L      N ++
Sbjct: 680  VTLCTLLPGVVKAGLIEDAYKIIANFLYSCADQPANLFWEDLMG---SILAEAGIDNAVS 736

Query: 266  FN--VMIDCLCKGG------------KINEANG---LLELMIQR-GLNPDRFTYNSLMDG 307
            F+  ++ + +C+ G            K N A+G   L E   +  G+ P   TYN L+ G
Sbjct: 737  FSERLVANGICRDGDSILVPIIRYSFKHNNASGARMLFEKFTKDLGVQPKLPTYNLLIGG 796

Query: 308  YCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQT 367
                  I+ A+++FL + + GC   V +YN L++ Y K   ++E   +Y+++ ++     
Sbjct: 797  LLEADMIEIAQDVFLQVKNTGCIPDVATYNFLLDAYGKSGKIDELFEIYKEMSAHECEPN 856

Query: 368  VITYNTLLSGLFQAGQAGYAQKLF-DEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLF 426
             IT+N ++SGL +AG    A  L+ D M   +  P   TY  LIDGL K+  + EA +LF
Sbjct: 857  TITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLF 916

Query: 427  HMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRK 486
              +          I+N LI+G  KAG  D A  LF ++ ++G+ P + TYS+++  LC  
Sbjct: 917  EGMSDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMV 976

Query: 487  GKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDT 546
            G++++   +   ++++G  P+VV +N +++G  + ++  + + L ++M +  R + PD  
Sbjct: 977  GRVDEGLHYFRELKESGLNPDVVCYNLIINGLGKFHRLEEALVLFNEMKK-SRGITPDLY 1035

Query: 547  TFSIVVDLLAKDEKYHECSAVSKSSYRACLYVTIFQPSSL 586
            T++ ++  L       E   +     RA L   +F  ++L
Sbjct: 1036 TYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNAL 1075



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 122/439 (27%), Positives = 213/439 (48%), Gaps = 8/439 (1%)

Query: 125 RGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYE 184
             L V+ +I+E  ++F  M    ++ D  TY T+       G L  A    +KM     E
Sbjct: 128 EALRVDGKIEEMAYVFDLMQKRIIKRDTNTYLTIFKCLSVKGGLRQAPFALRKM----RE 183

Query: 185 NGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNW 244
            G +   N +SY+ +I  L K     +A E++  M   G  P++   ++L+ G     + 
Sbjct: 184 FGFV--LNAYSYNGLIHLLLKSRFCTEAMEVYRRMILDGFRPSLQTYSSLMVGLGKRRDI 241

Query: 245 EEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSL 304
           E V GL  EM  LG +PN+ TF + I  L + GKINEA  +L+ M   G  PD  TY  L
Sbjct: 242 ESVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVL 301

Query: 305 MDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGV 364
           +D  C   ++D A+E+F  M +   K   V+Y  L++ +    +++     + ++  +G 
Sbjct: 302 IDALCTARKLDCAKEVFAKMKTGRHKPDRVTYITLLDRFSDNRDLDSVNQFWSEMEKDGH 361

Query: 365 RQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVK 424
              V+T+  L+  L +AG  G A    D M+   + P+L TYN LI GL + + + +A++
Sbjct: 362 VPDVVTFTILVDALCKAGNFGEAFAKLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALE 421

Query: 425 LFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLC 484
           +F  +E    +     +   ID   K+G   +A E F K+  KG+ P +V  +  ++ L 
Sbjct: 422 IFDNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLA 481

Query: 485 RKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPD 544
           + G+  +A      ++  G  P+ VT+N +M  + +  +  + ++LL +M   E    PD
Sbjct: 482 KAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMV--ENCCEPD 539

Query: 545 DTTFSIVVDLLAKDEKYHE 563
               + +++ L K ++  E
Sbjct: 540 VIVVNSLINTLYKADRVDE 558



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 132/520 (25%), Positives = 238/520 (45%), Gaps = 61/520 (11%)

Query: 56   LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNI 115
            + EA   F  M      P   +FN LF  + KN      +    K++ +G +PD  T N 
Sbjct: 591  IQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNT 650

Query: 116  LINCF---GNKERGLCVENRIKEATW--------LFKNMIAFGVRPDVIT---------- 154
            +I      G  +  +C  +++K+  +        L   ++  G+  D             
Sbjct: 651  IIFGLVKNGQVKEAMCFFHQMKKLVYPDFVTLCTLLPGVVKAGLIEDAYKIIANFLYSCA 710

Query: 155  -----------YGTLI-----------------NGFCRTGN--LSVALRLH--------K 176
                        G+++                 NG CR G+  L   +R           
Sbjct: 711  DQPANLFWEDLMGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSFKHNNASGA 770

Query: 177  KMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIH 236
            +M+   +   L  +  + +Y+++I  L +  +++ A+++FL++K  G  P V     L+ 
Sbjct: 771  RMLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKNTGCIPDVATYNFLLD 830

Query: 237  GFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLL-ELMIQRGLN 295
             +  +G  +E+  ++ EM      PN +T N++I  L K G +++A  L  +LM  R  +
Sbjct: 831  AYGKSGKIDELFEIYKEMSAHECEPNTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFS 890

Query: 296  PDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSL 355
            P   TY  L+DG    GR+  A+++F  M   GC+     YNILING+ K    + A +L
Sbjct: 891  PTACTYGPLIDGLSKSGRLYEAKQLFEGMSDYGCRPNCAIYNILINGFGKAGEADAACAL 950

Query: 356  YRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCK 415
            +++++  GVR  + TY+ L+  L   G+       F E+K   + PD+  YN++I+GL K
Sbjct: 951  FKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFRELKESGLNPDVVCYNLIINGLGK 1010

Query: 416  NNCVQEAVKLFHMLEMNK-FEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVV 474
             + ++EA+ LF+ ++ ++     +  +N LI  L  AG ++ A ++++++ + GL P V 
Sbjct: 1011 FHRLEEALVLFNEMKKSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVF 1070

Query: 475  TYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTL 514
            T++ +I G    GK E A      M   G +PN  T+  L
Sbjct: 1071 TFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQL 1110



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 88/299 (29%), Positives = 141/299 (47%), Gaps = 36/299 (12%)

Query: 73   PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILIN-------------- 118
            P ++++N L  A  K+   D +   Y+++ +    P+ +T NI+I+              
Sbjct: 820  PDVATYNFLLDAYGKSGKIDELFEIYKEMSAHECEPNTITHNIVISGLVKAGNVDDALDL 879

Query: 119  ---------------CFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFC 163
                            +G    GL    R+ EA  LF+ M  +G RP+   Y  LINGF 
Sbjct: 880  YYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMSDYGCRPNCAIYNILINGFG 939

Query: 164  RTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRG 223
            + G    A  L K+MV    + G+  + ++ +YS+++D LC  G VD+    F E+K  G
Sbjct: 940  KAGEADAACALFKRMV----KEGV--RPDLKTYSVLVDCLCMVGRVDEGLHYFRELKESG 993

Query: 224  INPAVVVCTTLIHGFCCAGNWEEVNGLFIEML-DLGPRPNLLTFNVMIDCLCKGGKINEA 282
            +NP VV    +I+G       EE   LF EM    G  P+L T+N +I  L   G + EA
Sbjct: 994  LNPDVVCYNLIINGLGKFHRLEEALVLFNEMKKSRGITPDLYTYNSLILNLGIAGMVEEA 1053

Query: 283  NGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILIN 341
              +   + + GL P+ FT+N+L+ GY L G+ + A  ++ +M + G      +Y  L N
Sbjct: 1054 GKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQLPN 1112



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 88/358 (24%), Positives = 158/358 (44%), Gaps = 4/358 (1%)

Query: 177 KMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIH 236
           K V+G+  + L+  T   +Y  ++++L  +G +++   +F  M+ R I        T+  
Sbjct: 108 KSVAGN--SNLVHTTETCNY--MLEALRVDGKIEEMAYVFDLMQKRIIKRDTNTYLTIFK 163

Query: 237 GFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNP 296
                G   +      +M + G   N  ++N +I  L K     EA  +   MI  G  P
Sbjct: 164 CLSVKGGLRQAPFALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILDGFRP 223

Query: 297 DRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLY 356
              TY+SLM G      I++   +   M + G K  V ++ I I    +   + EA  + 
Sbjct: 224 SLQTYSSLMVGLGKRRDIESVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEIL 283

Query: 357 RQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKN 416
           +++   G    V+TY  L+  L  A +   A+++F +MK    +PD  TY  L+D    N
Sbjct: 284 KRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFAKMKTGRHKPDRVTYITLLDRFSDN 343

Query: 417 NCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTY 476
             +    + +  +E +     +  F  L+D LCKAG    A+     +  +G++P + TY
Sbjct: 344 RDLDSVNQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFAKLDVMRDQGILPNLHTY 403

Query: 477 SIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKM 534
           + +I GL R  +L+ A +    ME  G  P   T+   +  + ++  +   +E   KM
Sbjct: 404 NTLICGLLRVHRLDDALEIFDNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKM 461



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 39/162 (24%), Positives = 76/162 (46%), Gaps = 11/162 (6%)

Query: 23   SLFKSPRQIAAVSSPETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLF 82
            +LFK  R +     P+ +    L + C   +  ++E  ++F  +     +P +  +NL+ 
Sbjct: 949  ALFK--RMVKEGVRPDLKTYSVLVD-CLCMVGRVDEGLHYFRELKESGLNPDVVCYNLII 1005

Query: 83   GAVAK-NRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFK 141
              + K +R  +A++ F     S G+ PD  T N LI   G       +   ++EA  ++ 
Sbjct: 1006 NGLGKFHRLEEALVLFNEMKKSRGITPDLYTYNSLILNLG-------IAGMVEEAGKIYN 1058

Query: 142  NMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDY 183
             +   G+ P+V T+  LI G+  +G    A  +++ MV+G +
Sbjct: 1059 EIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGF 1100


>gi|414874052|tpg|DAA52609.1| TPA: hypothetical protein ZEAMMB73_367214 [Zea mays]
          Length = 716

 Score =  239 bits (611), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 156/505 (30%), Positives = 251/505 (49%), Gaps = 43/505 (8%)

Query: 1   MASRTQFRCLFSSETVSKVKLSSLFKSPRQIAAVSSPETQLNEFLHENCKSGIINLNEAR 60
           +A  T   C F    V+K     LFK   Q   +       +  +H  CK+  +   EA 
Sbjct: 224 VAYTTVIDCFFKEGDVNKA--CDLFKEMVQ-RGIPPDLVTYSSVVHALCKARAMGKAEA- 279

Query: 61  YFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCF 120
            F   M +    P   ++N L    +    +   +  ++++    +LPD +TLN+L+   
Sbjct: 280 -FLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLNMLMG-- 336

Query: 121 GNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVS 180
                 LC   +IKEA  +F  M   G  PDV +Y  ++NG+   G L     L   M+ 
Sbjct: 337 -----SLCKYGKIKEARDVFDTMAMKGQNPDVFSYKIMLNGYATKGCLVDMTDLFDLML- 390

Query: 181 GD---------------YEN-GLISKT--------------NIFSYSIIIDSLCKEGLVD 210
           GD               Y N G++ K               ++ +Y+ +I +LC+ G +D
Sbjct: 391 GDGIAPDIYTFSVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGKMD 450

Query: 211 KAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMI 270
            A E F +M  +G+ P       LI GFC  G+  +   L +E+++ G R +++ F+ +I
Sbjct: 451 DAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELILEIMNNGMRLDIVFFSSII 510

Query: 271 DCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCK 330
           + LCK G+I +A  + +L +  G +PD   Y+ LMDGYCLVG+++ A  +F +M S G +
Sbjct: 511 NNLCKLGRIMDAQNIFDLTVNVGQHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIE 570

Query: 331 HTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKL 390
             VV Y  L+NGYCKI  ++E +SL+R+++  G++ + I YN ++ GLF AG+   A+  
Sbjct: 571 PNVVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFVAGRTVPAKVK 630

Query: 391 FDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCK 450
           F EM    +  +  TYNI++ G  KN C  EA+ LF  L     +  I   N +I G+ +
Sbjct: 631 FHEMTESGIAINKCTYNIVLRGFFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQ 690

Query: 451 AGRLDNAWELFHKLPQKGLVPTVVT 475
             R++ A +LF  + + GLVP VVT
Sbjct: 691 TRRVEEAKDLFASISRSGLVPCVVT 715



 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 151/552 (27%), Positives = 258/552 (46%), Gaps = 60/552 (10%)

Query: 72  SPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVEN 131
           SP   ++ +L     +    +  ++F+ +L+  GL  D +  N L+       +G C   
Sbjct: 112 SPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLL-------KGFCEAK 164

Query: 132 RIKEA-TWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISK 190
           R  EA   L       G  PDV +Y  L+   C  G    A  L + M  G    G +  
Sbjct: 165 RTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEG----GAVCS 220

Query: 191 TNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCA--------- 241
            ++ +Y+ +ID   KEG V+KA +LF EM  RGI P +V  ++++H  C A         
Sbjct: 221 PDVVAYTTVIDCFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMGKAEAF 280

Query: 242 --------------------------GNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCK 275
                                     G W+E   +F EM      P+++T N+++  LCK
Sbjct: 281 LRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLNMLMGSLCK 340

Query: 276 GGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVS 335
            GKI EA  + + M  +G NPD F+Y  +++GY   G +    ++F  M   G    + +
Sbjct: 341 YGKIKEARDVFDTMAMKGQNPDVFSYKIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYT 400

Query: 336 YNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMK 395
           +++LI  Y     +++AM ++ ++  +GV+  V+TY T+++ L + G+   A + F++M 
Sbjct: 401 FSVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQMI 460

Query: 396 LYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLD 455
              V PD   Y+ LI G C +  + +A +L   +  N     I  F+ +I+ LCK GR+ 
Sbjct: 461 DQGVAPDKYAYHCLIQGFCTHGSLLKAKELILEIMNNGMRLDIVFFSSIINNLCKLGRIM 520

Query: 456 NAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLM 515
           +A  +F      G  P  V YS+++ G C  GK+EKA      M   G  PNVV + TL+
Sbjct: 521 DAQNIFDLTVNVGQHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYGTLV 580

Query: 516 HGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLL-------AKDEKYHECS--- 565
           +G+ +  +  + + L  +M   ++ + P    ++I++D L           K+HE +   
Sbjct: 581 NGYCKIGRIDEGLSLFREML--QKGIKPSTILYNIIIDGLFVAGRTVPAKVKFHEMTESG 638

Query: 566 -AVSKSSYRACL 576
            A++K +Y   L
Sbjct: 639 IAINKCTYNIVL 650



 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 131/509 (25%), Positives = 259/509 (50%), Gaps = 19/509 (3%)

Query: 72  SPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVEN 131
           SP + ++  +     K    +     ++++V  G+ PD +T + +++        LC   
Sbjct: 220 SPDVVAYTTVIDCFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVH-------ALCKAR 272

Query: 132 RIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKT 191
            + +A    + M+  GV PD  TY  LI G+  TG    A+R+ K+M      + ++   
Sbjct: 273 AMGKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEM----RRHSILP-- 326

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
           ++ + ++++ SLCK G + +A+++F  M  +G NP V     +++G+   G   ++  LF
Sbjct: 327 DVVTLNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYKIMLNGYATKGCLVDMTDLF 386

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
             ML  G  P++ TF+V+I      G +++A  +   M   G+ PD  TY +++   C +
Sbjct: 387 DLMLGDGIAPDIYTFSVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRI 446

Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
           G++D A E F  M  +G      +Y+ LI G+C   ++ +A  L  +I++NG+R  ++ +
Sbjct: 447 GKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELILEIMNNGMRLDIVFF 506

Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
           +++++ L + G+   AQ +FD        PD   Y++L+DG C    +++A+++F  +  
Sbjct: 507 SSIINNLCKLGRIMDAQNIFDLTVNVGQHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVS 566

Query: 432 NKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEK 491
              E  + ++  L++G CK GR+D    LF ++ QKG+ P+ + Y+I+I GL   G+   
Sbjct: 567 AGIEPNVVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFVAGRTVP 626

Query: 492 ANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIV 551
           A      M ++G A N  T+N ++ GF +N    + + L  ++     N+  D  T + +
Sbjct: 627 AKVKFHEMTESGIAINKCTYNIVLRGFFKNRCFDEAIFLFKELR--AMNVKIDIITLNTM 684

Query: 552 VDLLAKDEKYHEC----SAVSKSSYRACL 576
           +  + +  +  E     +++S+S    C+
Sbjct: 685 IAGMFQTRRVEEAKDLFASISRSGLVPCV 713



 Score =  125 bits (315), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 90/341 (26%), Positives = 147/341 (43%), Gaps = 43/341 (12%)

Query: 258 GPR---PNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRI 314
           GPR   P   T+ +++DC  +  +   A      +++ GL  D    N L+ G+C   R 
Sbjct: 107 GPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRT 166

Query: 315 DTAREIFLSMHSK-GCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGV--RQTVITY 371
           D A +I L    + GC   V SY+IL+   C      +A  L R +   G      V+ Y
Sbjct: 167 DEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAY 226

Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCK---------------- 415
            T++   F+ G    A  LF EM    + PDL TY+ ++  LCK                
Sbjct: 227 TTVIDCFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMGKAEAFLRQMVN 286

Query: 416 ----------NNCV---------QEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDN 456
                     NN +         +EAV++F  +  +     +   N L+  LCK G++  
Sbjct: 287 KGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLNMLMGSLCKYGKIKE 346

Query: 457 AWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMH 516
           A ++F  +  KG  P V +Y IM++G   KG L    D    M  +G AP++ TF+ L+ 
Sbjct: 347 ARDVFDTMAMKGQNPDVFSYKIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFSVLIK 406

Query: 517 GFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAK 557
            +       K + + ++M   +  + PD  T++ V+  L +
Sbjct: 407 AYANCGMLDKAMIIFNEMR--DHGVKPDVVTYTTVIAALCR 445


>gi|388521091|gb|AFK48607.1| unknown [Medicago truncatula]
          Length = 506

 Score =  239 bits (610), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 141/479 (29%), Positives = 242/479 (50%), Gaps = 42/479 (8%)

Query: 37  PETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVIS 96
           P + ++   H N   G ++L      F  + H  P+     FN + G++ K++HY  V+S
Sbjct: 36  PYSSISTTFHSNDVDGAVSL------FNSLLHQNPTLTAFEFNKILGSLVKSKHYHTVLS 89

Query: 97  FYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYG 156
             +++   G+ P+F+T NILINCF       C    I  A  +   ++  G  PD+IT  
Sbjct: 90  LSQQMEFEGINPNFVTFNILINCF-------CQLGLIPFAFSVLAKILKMGYEPDIITLN 142

Query: 157 TLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELF 216
           T I GFC  G +  AL  H K+V+  +        +  SY  +I+ LCK G    A +L 
Sbjct: 143 TFIKGFCLKGQIHQALNFHDKLVALGFH------LDQVSYGTLINGLCKVGETRAALQLL 196

Query: 217 LEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKG 276
             + G+ +    V+  T+I G     +  +   L+ EM+     P+++T++ +I      
Sbjct: 197 RRVDGKLVQLNAVMYNTVIDGMSKDKHVNDAFDLYSEMVAKRISPDVVTYSALIRGFFIV 256

Query: 277 GKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSY 336
           GK+ +A  L   MI   + PD +T+N L+DG+C  GR+  A+ +   M  +  K  V ++
Sbjct: 257 GKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKEGRLKKAKNVLDMMMIQDIKPNVSTF 316

Query: 337 NILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKL 396
           N L++G+CK   ++E  +++  ++  G++  V+TY +L+ G     Q   A+K+F+ M  
Sbjct: 317 NTLVDGFCKDRKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKAKKIFNTMSQ 376

Query: 397 YNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDN 456
             V  ++ +YNI+I+G CK   V +A+KLF  +        +  +N LIDGLCK+G++  
Sbjct: 377 RGVTANVHSYNIMINGFCKIKKVDKAMKLFIEMHHKHIIPDVVTYNSLIDGLCKSGKISY 436

Query: 457 AWELFHKLPQKGLVPTVVTY-----------------------SIMIHGLCRKGKLEKA 492
           A++L +++  +G  P ++TY                       +I+I GLC+ GKLE A
Sbjct: 437 AFQLVNEMHDRGQPPNIITYNSILNALLTKLKDQGIQPNMHTDTILIKGLCQSGKLEAA 495



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 108/367 (29%), Positives = 195/367 (53%), Gaps = 2/367 (0%)

Query: 194 FSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIE 253
           F ++ I+ SL K         L  +M+  GINP  V    LI+ FC  G       +  +
Sbjct: 69  FEFNKILGSLVKSKHYHTVLSLSQQMEFEGINPNFVTFNILINCFCQLGLIPFAFSVLAK 128

Query: 254 MLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGR 313
           +L +G  P+++T N  I   C  G+I++A    + ++  G + D+ +Y +L++G C VG 
Sbjct: 129 ILKMGYEPDIITLNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGE 188

Query: 314 IDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNT 373
              A ++   +  K  +   V YN +I+G  K  +V +A  LY ++++  +   V+TY+ 
Sbjct: 189 TRAALQLLRRVDGKLVQLNAVMYNTVIDGMSKDKHVNDAFDLYSEMVAKRISPDVVTYSA 248

Query: 374 LLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNK 433
           L+ G F  G+   A  LF++M L N++PD+ T+NIL+DG CK   +++A  +  M+ +  
Sbjct: 249 LIRGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKEGRLKKAKNVLDMMMIQD 308

Query: 434 FEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKAN 493
            +  +  FN L+DG CK  ++     +F  + ++G+ P VVTY  ++ G C   ++ KA 
Sbjct: 309 IKPNVSTFNTLVDGFCKDRKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKAK 368

Query: 494 DFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
                M + G   NV ++N +++GF +  K  K ++L  +M    ++++PD  T++ ++D
Sbjct: 369 KIFNTMSQRGVTANVHSYNIMINGFCKIKKVDKAMKLFIEMH--HKHIIPDVVTYNSLID 426

Query: 554 LLAKDEK 560
            L K  K
Sbjct: 427 GLCKSGK 433



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 108/429 (25%), Positives = 224/429 (52%), Gaps = 9/429 (2%)

Query: 130 ENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLIS 189
            N +  A  LF +++          +  ++    ++ +    L L ++M   ++E     
Sbjct: 46  SNDVDGAVSLFNSLLHQNPTLTAFEFNKILGSLVKSKHYHTVLSLSQQM---EFEG---I 99

Query: 190 KTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNG 249
             N  +++I+I+  C+ GL+  A  +  ++   G  P ++   T I GFC  G   +   
Sbjct: 100 NPNFVTFNILINCFCQLGLIPFAFSVLAKILKMGYEPDIITLNTFIKGFCLKGQIHQALN 159

Query: 250 LFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYC 309
              +++ LG   + +++  +I+ LCK G+   A  LL  +  + +  +   YN+++DG  
Sbjct: 160 FHDKLVALGFHLDQVSYGTLINGLCKVGETRAALQLLRRVDGKLVQLNAVMYNTVIDGMS 219

Query: 310 LVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVI 369
               ++ A +++  M +K     VV+Y+ LI G+  +  +++A+ L+ ++I   ++  V 
Sbjct: 220 KDKHVNDAFDLYSEMVAKRISPDVVTYSALIRGFFIVGKLKDAIDLFNKMILENIKPDVY 279

Query: 370 TYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHML 429
           T+N L+ G  + G+   A+ + D M + +++P++ST+N L+DG CK+  ++E   +F M+
Sbjct: 280 TFNILVDGFCKEGRLKKAKNVLDMMMIQDIKPNVSTFNTLVDGFCKDRKMKEGKTVFAMM 339

Query: 430 EMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKL 489
                +  +  +  L+DG C   +++ A ++F+ + Q+G+   V +Y+IMI+G C+  K+
Sbjct: 340 MKQGIKPNVVTYCSLMDGYCLVKQVNKAKKIFNTMSQRGVTANVHSYNIMINGFCKIKKV 399

Query: 490 EKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTF- 548
           +KA    + M      P+VVT+N+L+ G  ++ K S   +L+++M   +R   P+  T+ 
Sbjct: 400 DKAMKLFIEMHHKHIIPDVVTYNSLIDGLCKSGKISYAFQLVNEMH--DRGQPPNIITYN 457

Query: 549 SIVVDLLAK 557
           SI+  LL K
Sbjct: 458 SILNALLTK 466



 Score =  122 bits (306), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 81/291 (27%), Positives = 140/291 (48%), Gaps = 5/291 (1%)

Query: 280 NEANGLLEL---MIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSY 336
           N+ +G + L   ++ +      F +N ++          T   +   M  +G     V++
Sbjct: 47  NDVDGAVSLFNSLLHQNPTLTAFEFNKILGSLVKSKHYHTVLSLSQQMEFEGINPNFVTF 106

Query: 337 NILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKL 396
           NILIN +C++  +  A S+  +I+  G    +IT NT + G    GQ   A    D++  
Sbjct: 107 NILINCFCQLGLIPFAFSVLAKILKMGYEPDIITLNTFIKGFCLKGQIHQALNFHDKLVA 166

Query: 397 YNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDN 456
                D  +Y  LI+GLCK    + A++L   ++    +    ++N +IDG+ K   +++
Sbjct: 167 LGFHLDQVSYGTLINGLCKVGETRAALQLLRRVDGKLVQLNAVMYNTVIDGMSKDKHVND 226

Query: 457 AWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMH 516
           A++L+ ++  K + P VVTYS +I G    GKL+ A D    M      P+V TFN L+ 
Sbjct: 227 AFDLYSEMVAKRISPDVVTYSALIRGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVD 286

Query: 517 GFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAV 567
           GF +  +  K   +L  M    +++ P+ +TF+ +VD   KD K  E   V
Sbjct: 287 GFCKEGRLKKAKNVLDMMMI--QDIKPNVSTFNTLVDGFCKDRKMKEGKTV 335



 Score =  105 bits (263), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 82/309 (26%), Positives = 140/309 (45%), Gaps = 62/309 (20%)

Query: 34  VSSPETQLNEFLHENCKSGII---NLNEARYFFGYMTHMQPSPPISSFN-LLFGAVAKNR 89
           V     QLN  ++     G+    ++N+A   +  M   + SP + +++ L+ G     +
Sbjct: 199 VDGKLVQLNAVMYNTVIDGMSKDKHVNDAFDLYSEMVAKRISPDVVTYSALIRGFFIVGK 258

Query: 90  HYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKER------------------------ 125
             DA I  + K++   + PD  T NIL++ F  + R                        
Sbjct: 259 LKDA-IDLFNKMILENIKPDVYTFNILVDGFCKEGRLKKAKNVLDMMMIQDIKPNVSTFN 317

Query: 126 ----GLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSG 181
               G C + ++KE   +F  M+  G++P+V+TY +L++G+C    ++ A    KK+ + 
Sbjct: 318 TLVDGFCKDRKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKA----KKIFNT 373

Query: 182 DYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCA 241
             + G+ +  N+ SY+I+I+  CK   VDKA +LF+EM  + I P VV   +LI G C +
Sbjct: 374 MSQRGVTA--NVHSYNIMINGFCKIKKVDKAMKLFIEMHHKHIIPDVVTYNSLIDGLCKS 431

Query: 242 GNWEEVNGLFIEMLDLGPRPNLLTFN-----------------------VMIDCLCKGGK 278
           G       L  EM D G  PN++T+N                       ++I  LC+ GK
Sbjct: 432 GKISYAFQLVNEMHDRGQPPNIITYNSILNALLTKLKDQGIQPNMHTDTILIKGLCQSGK 491

Query: 279 INEANGLLE 287
           +  A  + E
Sbjct: 492 LEAARKVFE 500



 Score = 75.5 bits (184), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 59/230 (25%), Positives = 101/230 (43%), Gaps = 38/230 (16%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CK G   L +A+     M      P +S+FN L     K+R      + +  ++  G+ P
Sbjct: 289 CKEG--RLKKAKNVLDMMMIQDIKPNVSTFNTLVDGFCKDRKMKEGKTVFAMMMKQGIKP 346

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           + +T   L++       G C+  ++ +A  +F  M   GV  +V +Y  +INGFC+   +
Sbjct: 347 NVVTYCSLMD-------GYCLVKQVNKAKKIFNTMSQRGVTANVHSYNIMINGFCKIKKV 399

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEM--------- 219
             A++L  +M    +   +I   ++ +Y+ +ID LCK G +  A +L  EM         
Sbjct: 400 DKAMKLFIEM----HHKHIIP--DVVTYNSLIDGLCKSGKISYAFQLVNEMHDRGQPPNI 453

Query: 220 --------------KGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEML 255
                         K +GI P +   T LI G C +G  E    +F ++L
Sbjct: 454 ITYNSILNALLTKLKDQGIQPNMHTDTILIKGLCQSGKLEAARKVFEDLL 503


>gi|242046334|ref|XP_002461038.1| hypothetical protein SORBIDRAFT_02g039560 [Sorghum bicolor]
 gi|241924415|gb|EER97559.1| hypothetical protein SORBIDRAFT_02g039560 [Sorghum bicolor]
          Length = 595

 Score =  239 bits (610), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 151/518 (29%), Positives = 262/518 (50%), Gaps = 21/518 (4%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMT---HMQPSPPISSFNLLFGAVAKNRHYDAVISFY 98
           N  L   C+ G  +L +AR     M+   H    P   S+  +   +  +R     ++  
Sbjct: 87  NTVLAALCRRGGDHLRQARSLLVDMSREAHPAARPNAVSYTTVMRGLCASRRTGEAVALL 146

Query: 99  RKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTL 158
           R + + G+  D +T   LI       RGLC  + +  A  L   M   GV+P+V+ Y  L
Sbjct: 147 RSMQASGVRADVVTYGTLI-------RGLCDASELDAALELLDEMCGSGVQPNVVVYSCL 199

Query: 159 INGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLE 218
           + G+CR+G      ++ + M       G+  K ++  ++ +ID LCKEG   KA ++   
Sbjct: 200 LRGYCRSGRWQDVGKVFEDM----SRRGI--KPDVIMFTGLIDDLCKEGKTGKAAKVKDM 253

Query: 219 MKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGK 278
           M  RG+ P VV    LI+  C  G+  E   L  EM D G  P+++T+N +I  L    +
Sbjct: 254 MVQRGLEPNVVTYNVLINSLCKEGSVREALTLRKEMDDKGVAPDVVTYNTLIAGLSGVLE 313

Query: 279 INEANGLLELMIQRG--LNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSY 336
           ++EA   LE MIQ    + PD  T+NS++ G C +GR+  A ++   M  +GC   +V+Y
Sbjct: 314 MDEAMSFLEEMIQGDTVVEPDVVTFNSVIHGLCKIGRMTQAVKVREMMAERGCMCNLVTY 373

Query: 337 NILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKL 396
           N LI G+ ++  V+ AM+L  ++  +G+     TY+ L++G  +  +   A+K    M+ 
Sbjct: 374 NYLIGGFLRVHKVKMAMNLMDELAISGLEPDSFTYSILINGFSKMWEVDRAEKFLCTMRQ 433

Query: 397 YNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDN 456
             ++ +L  Y  L+  +C+   ++ A+ LF+ ++ N     I  ++ +I G CK+G +  
Sbjct: 434 RGIKAELFHYIPLLAAMCQQGMMERAMGLFNEMDKNCGLDAIA-YSTMIHGACKSGDMKT 492

Query: 457 AWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMH 516
             +L   +  +GL P  VTYS++I+   + G LE+A   L  M  +G  P+V  F++L+ 
Sbjct: 493 VKQLIQDMLDEGLAPDAVTYSMLINMYAKLGDLEEAERVLKQMTASGFVPDVAVFDSLIK 552

Query: 517 GFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDL 554
           G+    +T KV++L+H+M    +N+  D    S ++ L
Sbjct: 553 GYSAEGQTDKVLKLIHEMR--AKNVAFDPKIISTIIRL 588



 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 128/426 (30%), Positives = 223/426 (52%), Gaps = 11/426 (2%)

Query: 147 GVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKE 206
             RP+ ++Y T++ G C +     A+ L + M +         + ++ +Y  +I  LC  
Sbjct: 118 AARPNAVSYTTVMRGLCASRRTGEAVALLRSMQASGV------RADVVTYGTLIRGLCDA 171

Query: 207 GLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTF 266
             +D A EL  EM G G+ P VVV + L+ G+C +G W++V  +F +M   G +P+++ F
Sbjct: 172 SELDAALELLDEMCGSGVQPNVVVYSCLLRGYCRSGRWQDVGKVFEDMSRRGIKPDVIMF 231

Query: 267 NVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHS 326
             +ID LCK GK  +A  + ++M+QRGL P+  TYN L++  C  G +  A  +   M  
Sbjct: 232 TGLIDDLCKEGKTGKAAKVKDMMVQRGLEPNVVTYNVLINSLCKEGSVREALTLRKEMDD 291

Query: 327 KGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNG--VRQTVITYNTLLSGLFQAGQA 384
           KG    VV+YN LI G   +L ++EAMS   ++I     V   V+T+N+++ GL + G+ 
Sbjct: 292 KGVAPDVVTYNTLIAGLSGVLEMDEAMSFLEEMIQGDTVVEPDVVTFNSVIHGLCKIGRM 351

Query: 385 GYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCL 444
             A K+ + M       +L TYN LI G  + + V+ A+ L   L ++  E     ++ L
Sbjct: 352 TQAVKVREMMAERGCMCNLVTYNYLIGGFLRVHKVKMAMNLMDELAISGLEPDSFTYSIL 411

Query: 445 IDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGC 504
           I+G  K   +D A +    + Q+G+   +  Y  ++  +C++G +E+A      M+KN C
Sbjct: 412 INGFSKMWEVDRAEKFLCTMRQRGIKAELFHYIPLLAAMCQQGMMERAMGLFNEMDKN-C 470

Query: 505 APNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHEC 564
             + + ++T++HG  ++     V +L+  M   +  L PD  T+S+++++ AK     E 
Sbjct: 471 GLDAIAYSTMIHGACKSGDMKTVKQLIQDML--DEGLAPDAVTYSMLINMYAKLGDLEEA 528

Query: 565 SAVSKS 570
             V K 
Sbjct: 529 ERVLKQ 534



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 92/308 (29%), Positives = 159/308 (51%), Gaps = 9/308 (2%)

Query: 275 KGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG--RIDTAREIFLSMHSKG---C 329
           +G  + EA  LL  +       D  +YN+++   C  G   +  AR + + M  +     
Sbjct: 63  RGAPVTEACSLLSALPD---VRDAVSYNTVLAALCRRGGDHLRQARSLLVDMSREAHPAA 119

Query: 330 KHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQK 389
           +   VSY  ++ G C      EA++L R + ++GVR  V+TY TL+ GL  A +   A +
Sbjct: 120 RPNAVSYTTVMRGLCASRRTGEAVALLRSMQASGVRADVVTYGTLIRGLCDASELDAALE 179

Query: 390 LFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLC 449
           L DEM    V+P++  Y+ L+ G C++   Q+  K+F  +     +  + +F  LID LC
Sbjct: 180 LLDEMCGSGVQPNVVVYSCLLRGYCRSGRWQDVGKVFEDMSRRGIKPDVIMFTGLIDDLC 239

Query: 450 KAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVV 509
           K G+   A ++   + Q+GL P VVTY+++I+ LC++G + +A      M+  G AP+VV
Sbjct: 240 KEGKTGKAAKVKDMMVQRGLEPNVVTYNVLINSLCKEGSVREALTLRKEMDDKGVAPDVV 299

Query: 510 TFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSK 569
           T+NTL+ G     +  + +  L +M + +  + PD  TF+ V+  L K  +  +   V +
Sbjct: 300 TYNTLIAGLSGVLEMDEAMSFLEEMIQGDTVVEPDVVTFNSVIHGLCKIGRMTQAVKVRE 359

Query: 570 -SSYRACL 576
             + R C+
Sbjct: 360 MMAERGCM 367


>gi|414882130|tpg|DAA59261.1| TPA: hypothetical protein ZEAMMB73_845952 [Zea mays]
          Length = 1603

 Score =  239 bits (610), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 147/493 (29%), Positives = 243/493 (49%), Gaps = 18/493 (3%)

Query: 63   FGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGN 122
            F  M     +P +   N +   +     +D + + + +++ +G+ P  +T N L++ F  
Sbjct: 1072 FREMASHGVAPDVKDCNRVLRVLRDAARWDDICAVHEEMLELGIEPSIVTYNTLLDSF-- 1129

Query: 123  KERGLCVENRIKEATWLFKNM--IAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVS 180
                   E R  +   L K M     G  P+ +TY  +I G  R G+L  A  L + M  
Sbjct: 1130 -----LKEGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGM-- 1182

Query: 181  GDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCC 240
                  L  K + F+Y+ +I  L   G V K  +L LEM+  GI P VV    +IHG   
Sbjct: 1183 -----RLSKKASSFTYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQ 1237

Query: 241  AGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFT 300
            +G  E     F EM  +G  P+++T+N +++  CK G + EA  L   + + GL P   T
Sbjct: 1238 SGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLT 1297

Query: 301  YNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQII 360
            YN L+DGYC +G ++ AR +   M  +GC   V +Y IL+ G   + ++  A   + +++
Sbjct: 1298 YNILIDGYCRLGDLEEARILKEEMGEQGCLPNVCTYTILMKGSLNVRSLAMAREFFDEML 1357

Query: 361  SNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQ 420
            S G++     YNT +      G    A +L + + L  +  D  TYNILI GLCK   ++
Sbjct: 1358 SKGLQPDCFAYNTRICAELILGDIARAFELREVLMLEGISSDTVTYNILIHGLCKTGNLK 1417

Query: 421  EAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMI 480
            +A +L   +  N  +     + CLI   C+ G L  A ++F+ +   GL+P+ VT++++I
Sbjct: 1418 DAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLREARKIFNNMISDGLLPSAVTFTVII 1477

Query: 481  HGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERN 540
            H  CR+G L  A  +   M + G  PN +T+N L+H   +  +T       H+M   ER 
Sbjct: 1478 HAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLASHHFHEML--ERG 1535

Query: 541  LVPDDTTFSIVVD 553
            LV +  T+++++D
Sbjct: 1536 LVANKYTYTLLID 1548



 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 106/345 (30%), Positives = 174/345 (50%), Gaps = 7/345 (2%)

Query: 216  FLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCK 275
            F EM   G+ P V  C  ++     A  W+++  +  EML+LG  P+++T+N ++D   K
Sbjct: 1072 FREMASHGVAPDVKDCNRVLRVLRDAARWDDICAVHEEMLELGIEPSIVTYNTLLDSFLK 1131

Query: 276  GGKINEANGLLELMIQRGLN--PDRFTYNSLMDGYCLVGRIDTAREIFLSMH-SKGCKHT 332
             G+ ++   LL+ M  RG    P+  TYN ++ G    G ++ A E+   M  SK  K +
Sbjct: 1132 EGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGMRLSK--KAS 1189

Query: 333  VVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFD 392
              +YN LI G      V++   L  ++ + G+  TV+TYN ++ GL Q+G    AQ  F 
Sbjct: 1190 SFTYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKFA 1249

Query: 393  EMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAG 452
            EM+   + PD+ TYN L++G CK   ++EA+ LF  L        +  +N LIDG C+ G
Sbjct: 1250 EMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLG 1309

Query: 453  RLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFN 512
             L+ A  L  ++ ++G +P V TY+I++ G      L  A +F   M   G  P+   +N
Sbjct: 1310 DLEEARILKEEMGEQGCLPNVCTYTILMKGSLNVRSLAMAREFFDEMLSKGLQPDCFAYN 1369

Query: 513  TLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAK 557
            T +   L     ++  EL   +      +  D  T++I++  L K
Sbjct: 1370 TRICAELILGDIARAFELREVLM--LEGISSDTVTYNILIHGLCK 1412



 Score =  151 bits (382), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 99/331 (29%), Positives = 159/331 (48%), Gaps = 38/331 (11%)

Query: 42   NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
            N  L+  CK+G  NL EA   FG +     +P + ++N+L     +    +       ++
Sbjct: 1264 NSLLNGYCKAG--NLKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGDLEEARILKEEM 1321

Query: 102  VSIGLLPDFLTLNILI--------------------------NCFGNKERGLCVE---NR 132
               G LP+  T  IL+                          +CF    R +C E     
Sbjct: 1322 GEQGCLPNVCTYTILMKGSLNVRSLAMAREFFDEMLSKGLQPDCFAYNTR-ICAELILGD 1380

Query: 133  IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
            I  A  L + ++  G+  D +TY  LI+G C+TGNL  A  L  KMVS    NGL  + +
Sbjct: 1381 IARAFELREVLMLEGISSDTVTYNILIHGLCKTGNLKDAKELQMKMVS----NGL--QPD 1434

Query: 193  IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
              +Y+ +I + C+ GL+ +A+++F  M   G+ P+ V  T +IH +C  GN     G F 
Sbjct: 1435 CITYTCLIHAHCERGLLREARKIFNNMISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWFR 1494

Query: 253  EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
            +ML+ G  PN +T+NV+I  LC+ G+   A+     M++RGL  +++TY  L+DG C VG
Sbjct: 1495 KMLEEGVEPNEITYNVLIHALCRMGRTQLASHHFHEMLERGLVANKYTYTLLIDGNCKVG 1554

Query: 313  RIDTAREIFLSMHSKGCKHTVVSYNILINGY 343
              + A   +  MH  G     +++  L+ G+
Sbjct: 1555 NWEDAMRFYFEMHQNGIHPDYLTHKALLKGF 1585



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 61/238 (25%), Positives = 107/238 (44%), Gaps = 40/238 (16%)

Query: 353  MSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILID- 411
            +S +R++ S+GV   V   N +L  L  A +      + +EM    +EP + TYN L+D 
Sbjct: 1069 LSAFREMASHGVAPDVKDCNRVLRVLRDAARWDDICAVHEEMLELGIEPSIVTYNTLLDS 1128

Query: 412  ------------------------------------GLCKNNCVQEAVKLFHMLEMNKFE 435
                                                GL +   ++EA +L   + ++K  
Sbjct: 1129 FLKEGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGMRLSKKA 1188

Query: 436  FGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDF 495
                 +N LI GL   G +   ++L  ++  +G++PTVVTY+ MIHGL + G +E A   
Sbjct: 1189 SSF-TYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVK 1247

Query: 496  LLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
               M   G  P+V+T+N+L++G+ +     + + L   +      L P   T++I++D
Sbjct: 1248 FAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRA--GLAPTVLTYNILID 1303


>gi|302784788|ref|XP_002974166.1| hypothetical protein SELMODRAFT_100825 [Selaginella moellendorffii]
 gi|300158498|gb|EFJ25121.1| hypothetical protein SELMODRAFT_100825 [Selaginella moellendorffii]
          Length = 647

 Score =  239 bits (610), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 157/545 (28%), Positives = 253/545 (46%), Gaps = 61/545 (11%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CK+G   L+ A      +  M  SP + +F ++   + + +  D   S   + V  G  P
Sbjct: 20  CKTG--QLDRAMLL---LDEMPCSPDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEP 74

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           D++T N+ I+       GLC   R+ +A  L K M      P  +TY  L++G  + G L
Sbjct: 75  DYVTYNVFID-------GLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKAGRL 127

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKG------- 221
             A+ + ++MV    E G  +   + +Y+++ID L K G V++A+ +F++M G       
Sbjct: 128 DEAMAILEQMV----EKG--NSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDA 181

Query: 222 --------------------------------RGINPAVVVCTTLIHGFCCAGNWEEVNG 249
                                           RG+ P VV+   +I   C +GN E+   
Sbjct: 182 FVYTALISGLAKIGKLDEALVYLNQMVENGCARGVEPDVVIHNLVIRQLCASGNLEDALA 241

Query: 250 LFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYC 309
            F E LD        TFN ++  LCK  +  EA   ++ M +R   P  FTY SL+DG+ 
Sbjct: 242 YFDE-LDDSLDLTHFTFNPLVAALCKAERTEEAIAFVKKMSERRCFPTLFTYTSLVDGFL 300

Query: 310 LVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVI 369
            +GR+D A         +G     V+Y  +I+G CK+  VEE    + ++ + G     +
Sbjct: 301 KLGRLDEALLQLKEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAV 360

Query: 370 TYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHML 429
           TY  L+ G  +A     A +++ +M          TYNI++DGLCK   V EA   F  +
Sbjct: 361 TYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAM 420

Query: 430 EMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKL 489
           E       +  ++ L+DG C  G +  A ELF ++  +G  P +V+Y+I+I GLCR GKL
Sbjct: 421 EERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKL 480

Query: 490 EKANDFLLYMEKNGCAPNVVTFNTLMHGFLQN-NKTSKVVELLHKMAEPERNLVPDDTTF 548
            KA  +   + +    P+V TFN+ +HG  Q  +     VEL   M    +   P+  ++
Sbjct: 481 AKAYFYFEKLLQRRLCPDVYTFNSFLHGLCQRLDTVGDGVELFESMV--SQGTSPNLHSY 538

Query: 549 SIVVD 553
           SI++D
Sbjct: 539 SILMD 543



 Score =  221 bits (563), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 147/485 (30%), Positives = 234/485 (48%), Gaps = 39/485 (8%)

Query: 55  NLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLV----SIGLLPDF 110
            + EAR  F  M      P    +  L   +AK    D  + +  ++V    + G+ PD 
Sbjct: 161 RVEEARRIFVDMLGNGCRPDAFVYTALISGLAKIGKLDEALVYLNQMVENGCARGVEPDV 220

Query: 111 LTLNILINCF---GNKE------------------------RGLCVENRIKEATWLFKNM 143
           +  N++I      GN E                          LC   R +EA    K M
Sbjct: 221 VIHNLVIRQLCASGNLEDALAYFDELDDSLDLTHFTFNPLVAALCKAERTEEAIAFVKKM 280

Query: 144 IAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSL 203
                 P + TY +L++GF + G L  AL   K+ V    E G I   +  +Y+ IID L
Sbjct: 281 SERRCFPTLFTYTSLVDGFLKLGRLDEALLQLKEAV----ERGFIP--DAVTYTSIIDGL 334

Query: 204 CKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNL 263
           CK G V++  E F EM+ RG  P  V    LI GF  A    + + ++ +ML  G   + 
Sbjct: 335 CKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVST 394

Query: 264 LTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLS 323
           +T+N+++D LCK G++ EA      M +RG      TY++LMDG+C  G +  A E+F  
Sbjct: 395 VTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRR 454

Query: 324 MHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQA-G 382
           M  +GC+  +VSYNI+I G C+   + +A   + +++   +   V T+N+ L GL Q   
Sbjct: 455 MLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNSFLHGLCQRLD 514

Query: 383 QAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFN 442
             G   +LF+ M      P+L +Y+IL+DG+C+   ++  +++FH +        + +FN
Sbjct: 515 TVGDGVELFESMVSQGTSPNLHSYSILMDGICRAGGLEVTLEIFHEMVSRGVAPDVVVFN 574

Query: 443 CLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKN 502
            LI  LC AGR+D A E+F +L ++   P   +Y  ++  L R  ++E+A     +M+  
Sbjct: 575 TLIRWLCIAGRVDEALEVFRELERRS-APDAWSYWSLLDALSRCERMEEARLLSFHMKLQ 633

Query: 503 GCAPN 507
           GCAP 
Sbjct: 634 GCAPR 638



 Score =  191 bits (486), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 119/416 (28%), Positives = 204/416 (49%), Gaps = 20/416 (4%)

Query: 157 TLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELF 216
            L+NG C+TG L  A+ L  +M             ++ +++++I+ LC+E  +D+A  + 
Sbjct: 14  ALLNGLCKTGQLDRAMLLLDEMPCS---------PDMVAFTVVINGLCREKRLDEAFSVL 64

Query: 217 LEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKG 276
                 G  P  V     I G C A   ++   L  +M +    P  +T+  ++D L K 
Sbjct: 65  ERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKA 124

Query: 277 GKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSY 336
           G+++EA  +LE M+++G +P   TY  ++DG    GR++ AR IF+ M   GC+     Y
Sbjct: 125 GRLDEAMAILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVY 184

Query: 337 NILINGYCKILNVEEAMSLYRQIISN----GVRQTVITYNTLLSGLFQAGQAGYAQKLFD 392
             LI+G  KI  ++EA+    Q++ N    GV   V+ +N ++  L  +G    A   FD
Sbjct: 185 TALISGLAKIGKLDEALVYLNQMVENGCARGVEPDVVIHNLVIRQLCASGNLEDALAYFD 244

Query: 393 EMKLYNVEPDLS--TYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCK 450
           E+   +   DL+  T+N L+  LCK    +EA+     +   +    +  +  L+DG  K
Sbjct: 245 EL---DDSLDLTHFTFNPLVAALCKAERTEEAIAFVKKMSERRCFPTLFTYTSLVDGFLK 301

Query: 451 AGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVT 510
            GRLD A     +  ++G +P  VTY+ +I GLC+ G++E+  +    M   G  P+ VT
Sbjct: 302 LGRLDEALLQLKEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVT 361

Query: 511 FNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSA 566
           +  L+ GF++     K   +  +M +     V    T++I++D L K  +  E  A
Sbjct: 362 YAALIDGFMKAKMIPKAHRVYRQMLQS--GTVVSTVTYNIILDGLCKAGRVAEAYA 415



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 111/347 (31%), Positives = 182/347 (52%), Gaps = 21/347 (6%)

Query: 230 VCTTLIHGFCCAGNWEEVNGLFIEMLDLGP-RPNLLTFNVMIDCLCKGGKINEANGLLEL 288
           VCT L++G C  G  +    L  EM    P  P+++ F V+I+ LC+  +++EA  +LE 
Sbjct: 11  VCTALLNGLCKTGQLDRAMLLLDEM----PCSPDMVAFTVVINGLCREKRLDEAFSVLER 66

Query: 289 MIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILN 348
            ++ G  PD  TYN  +DG C   R+D A ++   M  K C  T V+Y  L++G  K   
Sbjct: 67  AVRAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKAGR 126

Query: 349 VEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNI 408
           ++EAM++  Q++  G   T+ TY  ++ GL +AG+   A+++F +M      PD   Y  
Sbjct: 127 LDEAMAILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTA 186

Query: 409 LIDGLCKNNCVQEAVKLFHMLEMNKFEFGIE----IFNCLIDGLCKAGRLDNAWELFHKL 464
           LI GL K   + EA+   + +  N    G+E    I N +I  LC +G L++A   F +L
Sbjct: 187 LISGLAKIGKLDEALVYLNQMVENGCARGVEPDVVIHNLVIRQLCASGNLEDALAYFDEL 246

Query: 465 PQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKT 524
               L  T  T++ ++  LC+  + E+A  F+  M +  C P + T+ +L+ GFL   K 
Sbjct: 247 -DDSLDLTHFTFNPLVAALCKAERTEEAIAFVKKMSERRCFPTLFTYTSLVDGFL---KL 302

Query: 525 SKVVELLHKMAEP-ERNLVPDDTTFSIVVDLLAK-------DEKYHE 563
            ++ E L ++ E  ER  +PD  T++ ++D L K        E++HE
Sbjct: 303 GRLDEALLQLKEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHE 349



 Score =  119 bits (299), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 95/335 (28%), Positives = 148/335 (44%), Gaps = 77/335 (22%)

Query: 289 MIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILN 348
           MI R L   R    +L++G C  G++D A    L +    C   +V++ ++ING C+   
Sbjct: 1   MIDRKLVDTRVC-TALLNGLCKTGQLDRA---MLLLDEMPCSPDMVAFTVVINGLCREKR 56

Query: 349 VEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNI 408
           ++EA S+  + +  G                                    EPD  TYN+
Sbjct: 57  LDEAFSVLERAVRAGC-----------------------------------EPDYVTYNV 81

Query: 409 LIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKG 468
            IDGLCK   V +A +L   ++  K       +  L+DGL KAGRLD A  +  ++ +KG
Sbjct: 82  FIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAILEQMVEKG 141

Query: 469 LVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVV 528
             PT+ TY+++I GL + G++E+A    + M  NGC P+   +  L+ G  +  K  + +
Sbjct: 142 NSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALISGLAKIGKLDEAL 201

Query: 529 ELLHKMAE--------PE---RNLVP-------------------DDT------TFSIVV 552
             L++M E        P+    NLV                    DD+      TF+ +V
Sbjct: 202 VYLNQMVENGCARGVEPDVVIHNLVIRQLCASGNLEDALAYFDELDDSLDLTHFTFNPLV 261

Query: 553 DLLAKDEKYHECSA-VSKSSYRACLYVTIFQPSSL 586
             L K E+  E  A V K S R C + T+F  +SL
Sbjct: 262 AALCKAERTEEAIAFVKKMSERRC-FPTLFTYTSL 295


>gi|297805766|ref|XP_002870767.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
 gi|297316603|gb|EFH47026.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
          Length = 747

 Score =  239 bits (610), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 153/540 (28%), Positives = 262/540 (48%), Gaps = 38/540 (7%)

Query: 55  NLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLN 114
           N++ A   F  M   Q SP + ++N+L        + D  + F+ ++   G LP+ +T N
Sbjct: 185 NISFAENVFKEMLQSQVSPNVFTYNILIRGFCLAGNLDVALRFFDRMEKKGCLPNVVTYN 244

Query: 115 ILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLS----V 170
            LI+       G C   +I +   L ++M   G+ P++I+Y  +ING CR G +     V
Sbjct: 245 TLID-------GYCKLRKIDDGFELLRSMALKGLEPNLISYNVVINGLCREGRMKEISFV 297

Query: 171 ALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVV 230
              ++K+  S D            +Y+ +I   CKEG   +A  +  EM   G++P+V+ 
Sbjct: 298 LTEMNKRGYSLDE----------VTYNTLIKGYCKEGNFHQALVMHAEMLRHGLSPSVIT 347

Query: 231 CTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMI 290
            T+LIH  C AGN         +M   G  PN  T+  ++D   + G +NEA  +L+ MI
Sbjct: 348 YTSLIHSMCKAGNMNRATEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLKEMI 407

Query: 291 QRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVE 350
             G +P   TYN+L++G+C+ G++  A  +   M  KG    VVSY+ +++G+C+  +V+
Sbjct: 408 DNGFSPSVVTYNALINGHCIAGKMVDAIAVLEDMKEKGLTPDVVSYSTVLSGFCRSYDVD 467

Query: 351 EAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILI 410
           EA+ + R++++ G++   ITY++L+ G  +  +   A  LFDEM    + PD  TY  LI
Sbjct: 468 EALRVKRKMVAKGIKPDTITYSSLIQGFCEQRRTKEACDLFDEMLRVGLPPDEFTYTALI 527

Query: 411 DGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLV 470
           +  C    +Q+A++L + +        +  ++ LI+GL K  R   A  L  KL  +  V
Sbjct: 528 NAYCMEGDLQKAIQLHNEMVEKGVLPDVVTYSVLINGLNKQARTREAKRLLLKLFYEESV 587

Query: 471 PTVVTYSIMIH---------------GLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLM 515
           P+ VTY  +I                G C KG + +A+     M +    P+   +N ++
Sbjct: 588 PSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLEKNHKPDGTAYNVMI 647

Query: 516 HGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKSSYRAC 575
           HG  +     K   L  +M +     +    T   +V  L K+ K +E ++V  +  R+C
Sbjct: 648 HGHCRGGDIRKAYSLYKEMVKS--GFLLHTVTVIALVKTLHKEGKVNELNSVIANVLRSC 705



 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 152/526 (28%), Positives = 257/526 (48%), Gaps = 62/526 (11%)

Query: 76  SSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKE 135
           S F+L+  + ++    D  +S      + G +P  L+ N +++     +R       I  
Sbjct: 135 SVFDLVVKSYSRLCLIDKALSIVHLSQAHGFMPGVLSYNAVLDATIRSKRN------ISF 188

Query: 136 ATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKM----------------- 178
           A  +FK M+   V P+V TY  LI GFC  GNL VALR   +M                 
Sbjct: 189 AENVFKEMLQSQVSPNVFTYNILIRGFCLAGNLDVALRFFDRMEKKGCLPNVVTYNTLID 248

Query: 179 -------VSGDYE-------NGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGI 224
                  +   +E        GL  + N+ SY+++I+ LC+EG + +   +  EM  RG 
Sbjct: 249 GYCKLRKIDDGFELLRSMALKGL--EPNLISYNVVINGLCREGRMKEISFVLTEMNKRGY 306

Query: 225 NPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANG 284
           +   V   TLI G+C  GN+ +   +  EML  G  P+++T+  +I  +CK G +N A  
Sbjct: 307 SLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATE 366

Query: 285 LLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYC 344
            L+ M  RGL P+  TY +L+DG+   G ++ A  +   M   G   +VV+YN LING+C
Sbjct: 367 FLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHC 426

Query: 345 KILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLS 404
               + +A+++   +   G+   V++Y+T+LSG  ++     A ++  +M    ++PD  
Sbjct: 427 IAGKMVDAIAVLEDMKEKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTI 486

Query: 405 TYNILIDGLCKNNCVQEAVKLF-HMLEMN--KFEFGIEIFNCLIDGLCKAGRLDNAWELF 461
           TY+ LI G C+    +EA  LF  ML +     EF    +  LI+  C  G L  A +L 
Sbjct: 487 TYSSLIQGFCEQRRTKEACDLFDEMLRVGLPPDEF---TYTALINAYCMEGDLQKAIQLH 543

Query: 462 HKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMH----- 516
           +++ +KG++P VVTYS++I+GL ++ +  +A   LL +      P+ VT++TL+      
Sbjct: 544 NEMVEKGVLPDVVTYSVLINGLNKQARTREAKRLLLKLFYEESVPSDVTYHTLIENCSNI 603

Query: 517 ----------GFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVV 552
                     GF      ++  ++   M   E+N  PD T +++++
Sbjct: 604 EFKSVVSLIKGFCMKGMMTEADQVFESML--EKNHKPDGTAYNVMI 647



 Score =  208 bits (529), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 151/545 (27%), Positives = 247/545 (45%), Gaps = 102/545 (18%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           C +G  NL+ A  FF  M      P + ++N L     K R  D      R +   GL P
Sbjct: 216 CLAG--NLDVALRFFDRMEKKGCLPNVVTYNTLIDGYCKLRKIDDGFELLRSMALKGLEP 273

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           + ++ N++IN       GLC E R+KE +++   M   G   D +TY TLI G+C+ GN 
Sbjct: 274 NLISYNVVIN-------GLCREGRMKEISFVLTEMNKRGYSLDEVTYNTLIKGYCKEGNF 326

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
             AL +H +M+     +GL    ++ +Y+ +I S+CK G +++A E   +M+ RG+ P  
Sbjct: 327 HQALVMHAEML----RHGL--SPSVITYTSLIHSMCKAGNMNRATEFLDQMRVRGLCPNE 380

Query: 229 VVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLEL 288
              TTL+ GF   G   E   +  EM+D G  P+++T+N +I+  C  GK+ +A  +LE 
Sbjct: 381 RTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDAIAVLED 440

Query: 289 MIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILN 348
           M ++GL PD  +Y++++ G+C    +D A  +   M +KG K   ++Y+ LI G+C+   
Sbjct: 441 MKEKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQRR 500

Query: 349 VEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNI 408
            +EA  L+ +++  G+     TY  L++     G    A +L +EM    V PD+ TY++
Sbjct: 501 TKEACDLFDEMLRVGLPPDEFTYTALINAYCMEGDLQKAIQLHNEMVEKGVLPDVVTYSV 560

Query: 409 LIDGLCKNNCVQEA----VKLFH------------------------------------- 427
           LI+GL K    +EA    +KLF+                                     
Sbjct: 561 LINGLNKQARTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGM 620

Query: 428 ----------MLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYS 477
                     MLE N    G   +N +I G C+ G +  A+ L+ ++ + G +   VT  
Sbjct: 621 MTEADQVFESMLEKNHKPDGTA-YNVMIHGHCRGGDIRKAYSLYKEMVKSGFLLHTVTVI 679

Query: 478 IMIHGLCRKGKLEKAN-----------------------------------DFLLYMEKN 502
            ++  L ++GK+ + N                                   D L  M K+
Sbjct: 680 ALVKTLHKEGKVNELNSVIANVLRSCELSEAEQAKVLVEINHREGNMDVVLDVLAEMAKD 739

Query: 503 GCAPN 507
           G  PN
Sbjct: 740 GFLPN 744



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 110/362 (30%), Positives = 197/362 (54%), Gaps = 3/362 (0%)

Query: 193 IFSYSIIIDSLCKEGL-VDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
           + SY+ ++D+  +    +  A+ +F EM    ++P V     LI GFC AGN +     F
Sbjct: 169 VLSYNAVLDATIRSKRNISFAENVFKEMLQSQVSPNVFTYNILIRGFCLAGNLDVALRFF 228

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
             M   G  PN++T+N +ID  CK  KI++   LL  M  +GL P+  +YN +++G C  
Sbjct: 229 DRMEKKGCLPNVVTYNTLIDGYCKLRKIDDGFELLRSMALKGLEPNLISYNVVINGLCRE 288

Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
           GR+     +   M+ +G     V+YN LI GYCK  N  +A+ ++ +++ +G+  +VITY
Sbjct: 289 GRMKEISFVLTEMNKRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLSPSVITY 348

Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
            +L+  + +AG    A +  D+M++  + P+  TY  L+DG  +   + EA ++   +  
Sbjct: 349 TSLIHSMCKAGNMNRATEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLKEMID 408

Query: 432 NKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEK 491
           N F   +  +N LI+G C AG++ +A  +   + +KGL P VV+YS ++ G CR   +++
Sbjct: 409 NGFSPSVVTYNALINGHCIAGKMVDAIAVLEDMKEKGLTPDVVSYSTVLSGFCRSYDVDE 468

Query: 492 ANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIV 551
           A      M   G  P+ +T+++L+ GF +  +T +  +L  +M      L PD+ T++ +
Sbjct: 469 ALRVKRKMVAKGIKPDTITYSSLIQGFCEQRRTKEACDLFDEMLRV--GLPPDEFTYTAL 526

Query: 552 VD 553
           ++
Sbjct: 527 IN 528



 Score =  198 bits (503), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 121/421 (28%), Positives = 210/421 (49%), Gaps = 9/421 (2%)

Query: 145 AFGVRPDVITYGTLINGFCRTG-NLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSL 203
           A G  P V++Y  +++   R+  N+S A  + K+M+            N+F+Y+I+I   
Sbjct: 162 AHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLQSQVS------PNVFTYNILIRGF 215

Query: 204 CKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNL 263
           C  G +D A   F  M+ +G  P VV   TLI G+C     ++   L   M   G  PNL
Sbjct: 216 CLAGNLDVALRFFDRMEKKGCLPNVVTYNTLIDGYCKLRKIDDGFELLRSMALKGLEPNL 275

Query: 264 LTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLS 323
           +++NV+I+ LC+ G++ E + +L  M +RG + D  TYN+L+ GYC  G    A  +   
Sbjct: 276 ISYNVVINGLCREGRMKEISFVLTEMNKRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAE 335

Query: 324 MHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQ 383
           M   G   +V++Y  LI+  CK  N+  A     Q+   G+     TY TL+ G  Q G 
Sbjct: 336 MLRHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQMRVRGLCPNERTYTTLVDGFSQKGY 395

Query: 384 AGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNC 443
              A ++  EM      P + TYN LI+G C    + +A+ +   ++       +  ++ 
Sbjct: 396 MNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDAIAVLEDMKEKGLTPDVVSYST 455

Query: 444 LIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNG 503
           ++ G C++  +D A  +  K+  KG+ P  +TYS +I G C + + ++A D    M + G
Sbjct: 456 VLSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQRRTKEACDLFDEMLRVG 515

Query: 504 CAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
             P+  T+  L++ +       K ++L ++M   E+ ++PD  T+S++++ L K  +  E
Sbjct: 516 LPPDEFTYTALINAYCMEGDLQKAIQLHNEMV--EKGVLPDVVTYSVLINGLNKQARTRE 573

Query: 564 C 564
            
Sbjct: 574 A 574


>gi|224096624|ref|XP_002310676.1| predicted protein [Populus trichocarpa]
 gi|222853579|gb|EEE91126.1| predicted protein [Populus trichocarpa]
          Length = 424

 Score =  239 bits (610), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 139/394 (35%), Positives = 221/394 (56%), Gaps = 8/394 (2%)

Query: 166 GNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGIN 225
           GNL  AL    +M+  +       +  I  ++ ++ S+ +    +    LF EM+ RGI 
Sbjct: 19  GNLDDALASFNRMLDRN------PQPPIIEFNRLLSSVVRMKKYETVVSLFKEMEFRGIK 72

Query: 226 PAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGL 285
             V   + LI+ FC   + +    +F + L  G +P+++ F  +ID +C+ GK   A GL
Sbjct: 73  YNVCTLSILINCFCFLHHVDYGFSVFGKTLKRGFKPDVVIFTTLIDGVCRIGKTELAAGL 132

Query: 286 LELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCK 345
           L+ M   G  PD  T NSLM GYC  G+ID  R+IF  M SKG K  V SY+I INGYCK
Sbjct: 133 LKEMGLVGCVPDVVTCNSLMRGYCSQGKIDKVRKIFHLMVSKGLKPDVYSYSIFINGYCK 192

Query: 346 ILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLST 405
           +  ++EAM L+ ++   GV    +TYNTL+  L QA +   AQ LF +M    + PD+  
Sbjct: 193 VEKIDEAMELFDEMSHRGVVPNAVTYNTLIKALCQALRPRDAQVLFRKMCACGLSPDILA 252

Query: 406 YNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLP 465
           Y+ L+DG CK   + E + LF  ++    +  + ++  +I+G+C++ ++ +A E+  +L 
Sbjct: 253 YSTLLDGFCKQGNLDEMLVLFQEMQRRLVKPDLVVYTIIINGMCRSRKVKDAKEVLSRLI 312

Query: 466 QKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTS 525
            +GL P V TY+ ++ GLCR+G + +A      ME++GC P   ++N L+ G LQ+N TS
Sbjct: 313 VEGLKPDVHTYTALVDGLCREGSIIEALRLFRKMEEDGCMPGSCSYNVLLQGCLQHNDTS 372

Query: 526 KVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDE 559
            VV+L+H+MA  +R    D  T + + D L  ++
Sbjct: 373 TVVQLIHEMA--DRGFYADAVTRTFLKDFLPGND 404



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 118/381 (30%), Positives = 196/381 (51%), Gaps = 15/381 (3%)

Query: 55  NLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLN 114
           NL++A   F  M    P PPI  FN L  +V + + Y+ V+S ++++   G+  +  TL+
Sbjct: 20  NLDDALASFNRMLDRNPQPPIIEFNRLLSSVVRMKKYETVVSLFKEMEFRGIKYNVCTLS 79

Query: 115 ILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRL 174
           ILINCF       C  + +     +F   +  G +PDV+ + TLI+G CR G   +A  L
Sbjct: 80  ILINCF-------CFLHHVDYGFSVFGKTLKRGFKPDVVIFTTLIDGVCRIGKTELAAGL 132

Query: 175 HKKMVSGDYENGLIS-KTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTT 233
            K+M       GL+    ++ + + ++   C +G +DK +++F  M  +G+ P V   + 
Sbjct: 133 LKEM-------GLVGCVPDVVTCNSLMRGYCSQGKIDKVRKIFHLMVSKGLKPDVYSYSI 185

Query: 234 LIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRG 293
            I+G+C     +E   LF EM   G  PN +T+N +I  LC+  +  +A  L   M   G
Sbjct: 186 FINGYCKVEKIDEAMELFDEMSHRGVVPNAVTYNTLIKALCQALRPRDAQVLFRKMCACG 245

Query: 294 LNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAM 353
           L+PD   Y++L+DG+C  G +D    +F  M  +  K  +V Y I+ING C+   V++A 
Sbjct: 246 LSPDILAYSTLLDGFCKQGNLDEMLVLFQEMQRRLVKPDLVVYTIIINGMCRSRKVKDAK 305

Query: 354 SLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGL 413
            +  ++I  G++  V TY  L+ GL + G    A +LF +M+     P   +YN+L+ G 
Sbjct: 306 EVLSRLIVEGLKPDVHTYTALVDGLCREGSIIEALRLFRKMEEDGCMPGSCSYNVLLQGC 365

Query: 414 CKNNCVQEAVKLFHMLEMNKF 434
            ++N     V+L H +    F
Sbjct: 366 LQHNDTSTVVQLIHEMADRGF 386



 Score =  148 bits (374), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 90/327 (27%), Positives = 159/327 (48%), Gaps = 13/327 (3%)

Query: 48  NCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLL 107
           NC   + +++     FG        P +  F  L   V +    +      +++  +G +
Sbjct: 83  NCFCFLHHVDYGFSVFGKTLKRGFKPDVVIFTTLIDGVCRIGKTELAAGLLKEMGLVGCV 142

Query: 108 PDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGN 167
           PD +T N L+       RG C + +I +   +F  M++ G++PDV +Y   ING+C+   
Sbjct: 143 PDVVTCNSLM-------RGYCSQGKIDKVRKIFHLMVSKGLKPDVYSYSIFINGYCKVEK 195

Query: 168 LSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPA 227
           +  A+ L  +M       G++   N  +Y+ +I +LC+      A+ LF +M   G++P 
Sbjct: 196 IDEAMELFDEM----SHRGVVP--NAVTYNTLIKALCQALRPRDAQVLFRKMCACGLSPD 249

Query: 228 VVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLE 287
           ++  +TL+ GFC  GN +E+  LF EM     +P+L+ + ++I+ +C+  K+ +A  +L 
Sbjct: 250 ILAYSTLLDGFCKQGNLDEMLVLFQEMQRRLVKPDLVVYTIIINGMCRSRKVKDAKEVLS 309

Query: 288 LMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKIL 347
            +I  GL PD  TY +L+DG C  G I  A  +F  M   GC     SYN+L+ G  +  
Sbjct: 310 RLIVEGLKPDVHTYTALVDGLCREGSIIEALRLFRKMEEDGCMPGSCSYNVLLQGCLQHN 369

Query: 348 NVEEAMSLYRQIISNGVRQTVITYNTL 374
           +    + L  ++   G     +T   L
Sbjct: 370 DTSTVVQLIHEMADRGFYADAVTRTFL 396


>gi|449527556|ref|XP_004170776.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Cucumis sativus]
          Length = 665

 Score =  239 bits (610), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 147/496 (29%), Positives = 248/496 (50%), Gaps = 35/496 (7%)

Query: 85  VAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMI 144
           + +N   +    F   +V  G +PD +    LI       RGLC   +  +AT + + + 
Sbjct: 120 LVRNGELEEGFKFLEDMVCRGDIPDIIACTSLI-------RGLCKTGKTWKATRVMEILE 172

Query: 145 AFGVRPDVITYGTLINGFCRTGNLSVALRLHKKM-VSGDY-----------ENGLISKT- 191
             G  PDVITY  LI+G+C+TG +  AL+L  +M VS D            ++G + +  
Sbjct: 173 DSGAVPDVITYNVLISGYCKTGEIGSALQLLDRMSVSPDVVTYNTILRTLCDSGKLKEAM 232

Query: 192 -------------NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGF 238
                        ++ +Y+I+I++ CKE  V +A +L  EM+ +G  P VV    LI+G 
Sbjct: 233 EVLDRQMQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGI 292

Query: 239 CCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDR 298
           C  G  +E       M   G +PN++T N+++  +C  G+  +A   L  MI++G +P  
Sbjct: 293 CKEGRLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSV 352

Query: 299 FTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQ 358
            T+N L++  C  G I  A ++   M   GC    +SYN L++  CK   +E A+     
Sbjct: 353 VTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDI 412

Query: 359 IISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNC 418
           ++S G    ++TYNTLL+ L + G+   A ++ +++      P L TYN +IDGL K   
Sbjct: 413 MVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGK 472

Query: 419 VQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSI 478
             +A+KL   ++    +  I  ++ L+ GL + G++D A   FH L + G+ P  +TY+ 
Sbjct: 473 TDDAIKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEMGVKPNAITYNS 532

Query: 479 MIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPE 538
           ++ GLC+  +  +A DFL YM   GC P   ++  L+ G        + +ELL+++    
Sbjct: 533 IMLGLCKARQTVRAIDFLAYMVARGCKPTETSYMILIEGLAYEGLAKEALELLNELC--S 590

Query: 539 RNLVPDDTTFSIVVDL 554
           R +V   +   +VV +
Sbjct: 591 RGVVKKSSAEQVVVKI 606



 Score =  198 bits (503), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 123/405 (30%), Positives = 206/405 (50%), Gaps = 15/405 (3%)

Query: 164 RTGNLSVALRLHKKMV-SGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGR 222
           R G L    +  + MV  GD         +I + + +I  LCK G   KA  +   ++  
Sbjct: 122 RNGELEEGFKFLEDMVCRGDI-------PDIIACTSLIRGLCKTGKTWKATRVMEILEDS 174

Query: 223 GINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLD-LGPRPNLLTFNVMIDCLCKGGKINE 281
           G  P V+    LI G+C  G      G  +++LD +   P+++T+N ++  LC  GK+ E
Sbjct: 175 GAVPDVITYNVLISGYCKTGEI----GSALQLLDRMSVSPDVVTYNTILRTLCDSGKLKE 230

Query: 282 ANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILIN 341
           A  +L+  +QR   PD  TY  L++  C    +  A ++   M  KGCK  VV+YN+LIN
Sbjct: 231 AMEVLDRQMQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLIN 290

Query: 342 GYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEP 401
           G CK   ++EA+     + S G +  VIT+N +L  +   G+   A+K   EM      P
Sbjct: 291 GICKEGRLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSP 350

Query: 402 DLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELF 461
            + T+NILI+ LC+   +  A+ +   +  +        +N L+  LCK  +++ A E  
Sbjct: 351 SVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYL 410

Query: 462 HKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQN 521
             +  +G  P +VTY+ ++  LC+ GK++ A + L  +   GC+P ++T+NT++ G  + 
Sbjct: 411 DIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKV 470

Query: 522 NKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSA 566
            KT   ++LL +M    + L PD  T+S +V  L+++ K  E  A
Sbjct: 471 GKTDDAIKLLDEMKG--KGLKPDIITYSTLVGGLSREGKVDEAIA 513



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 109/397 (27%), Positives = 192/397 (48%), Gaps = 15/397 (3%)

Query: 33  AVSSPETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYD 92
           +VS      N  L   C SG   L EA          +  P + ++ +L  A  K     
Sbjct: 207 SVSPDVVTYNTILRTLCDSG--KLKEAMEVLDRQMQRECYPDVITYTILIEATCKESGVG 264

Query: 93  AVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDV 152
             +    ++   G  PD +T N+LIN       G+C E R+ EA     +M ++G +P+V
Sbjct: 265 QAMKLLDEMRDKGCKPDVVTYNVLIN-------GICKEGRLDEAIRFLNHMPSYGCQPNV 317

Query: 153 ITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKA 212
           IT+  ++   C TG    A +   +M+            ++ +++I+I+ LC++GL+ +A
Sbjct: 318 ITHNIILRSMCSTGRWMDAEKFLAEMIRKG------CSPSVVTFNILINFLCRKGLIGRA 371

Query: 213 KELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDC 272
            ++  +M   G  P  +    L+H  C     E        M+  G  P+++T+N ++  
Sbjct: 372 IDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIMVSRGCYPDIVTYNTLLTA 431

Query: 273 LCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHT 332
           LCK GK++ A  +L  +  +G +P   TYN+++DG   VG+ D A ++   M  KG K  
Sbjct: 432 LCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTDDAIKLLDEMKGKGLKPD 491

Query: 333 VVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFD 392
           +++Y+ L+ G  +   V+EA++ +  +   GV+   ITYN+++ GL +A Q   A     
Sbjct: 492 IITYSTLVGGLSREGKVDEAIAFFHDLEEMGVKPNAITYNSIMLGLCKARQTVRAIDFLA 551

Query: 393 EMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHML 429
            M     +P  ++Y ILI+GL      +EA++L + L
Sbjct: 552 YMVARGCKPTETSYMILIEGLAYEGLAKEALELLNEL 588



 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 89/317 (28%), Positives = 154/317 (48%), Gaps = 17/317 (5%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CK G   L+EA  F  +M      P + + N++  ++     +     F  +++  G  P
Sbjct: 293 CKEG--RLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSP 350

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
             +T NILIN        LC +  I  A  + + M   G  P+ ++Y  L++  C+   +
Sbjct: 351 SVVTFNILINF-------LCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKM 403

Query: 169 SVALRLHKKMVS-GDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPA 227
             A+     MVS G Y        +I +Y+ ++ +LCK+G VD A E+  ++  +G +P 
Sbjct: 404 ERAIEYLDIMVSRGCY-------PDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPV 456

Query: 228 VVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLE 287
           ++   T+I G    G  ++   L  EM   G +P+++T++ ++  L + GK++EA     
Sbjct: 457 LITYNTVIDGLSKVGKTDDAIKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFH 516

Query: 288 LMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKIL 347
            + + G+ P+  TYNS+M G C   +   A +    M ++GCK T  SY ILI G     
Sbjct: 517 DLEEMGVKPNAITYNSIMLGLCKARQTVRAIDFLAYMVARGCKPTETSYMILIEGLAYEG 576

Query: 348 NVEEAMSLYRQIISNGV 364
             +EA+ L  ++ S GV
Sbjct: 577 LAKEALELLNELCSRGV 593


>gi|302799124|ref|XP_002981321.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
 gi|300150861|gb|EFJ17509.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
          Length = 457

 Score =  239 bits (610), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 136/433 (31%), Positives = 222/433 (51%), Gaps = 8/433 (1%)

Query: 127 LCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENG 186
           L    R       + +M+A G  P+  TYG L+   C+      A  + + M +      
Sbjct: 27  LAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGMAAQG---- 82

Query: 187 LISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEE 246
                N+FSYSI+I  LC+   VD+A EL  EM   G  P VV   +L+ G C  G  +E
Sbjct: 83  --CSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKE 140

Query: 247 VNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMD 306
              LF  M+  G  P+ + +NV+ID   K G + EA  L E M+++G  P  FTYNSL+ 
Sbjct: 141 AVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLS 200

Query: 307 GYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQ 366
           G+   G     + +F  M  +GC   + ++N L++G+CK+ ++ EA  L+ ++ S G   
Sbjct: 201 GFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPP 260

Query: 367 TVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLF 426
            V++YNTL+ G+   G+   AQ+L  EM    V PD+ +YNILIDG  K+  +  A+KLF
Sbjct: 261 DVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLF 320

Query: 427 HMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRK 486
           + +  +  E     ++ +ID LC+AG++  A+ +F  +   G  P       ++ GLCR 
Sbjct: 321 YEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRG 380

Query: 487 GKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDT 546
            +L ++ +    M K  C P +  +N LM+   +  ++  V E+ H++   ER   PD  
Sbjct: 381 ERLTESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELT--ERGFSPDVE 438

Query: 547 TFSIVVDLLAKDE 559
              ++++ L + +
Sbjct: 439 ISKVILETLRRSD 451



 Score =  238 bits (606), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 139/432 (32%), Positives = 223/432 (51%), Gaps = 13/432 (3%)

Query: 77  SFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEA 136
           S+N L   +AK+   D V   Y  +++ G +P+  T   L+       R LC   R +EA
Sbjct: 19  SYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLL-------RSLCQAQRFEEA 71

Query: 137 TWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSY 196
             +F+ M A G  P+V +Y  LI G CR   +  A  L  +M+ G ++       N+ +Y
Sbjct: 72  RSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQ------PNVVTY 125

Query: 197 SIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLD 256
             ++  LCK G + +A +LF  M  RG  P  VV   LI GF   G+  E   LF EML+
Sbjct: 126 GSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLE 185

Query: 257 LGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDT 316
            G  P + T+N ++    + G+      L + M+++G  P+ FT+N+L+DG+C +G +  
Sbjct: 186 KGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVE 245

Query: 317 AREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLS 376
           A  +FL M S GC   VVSYN LI G C      EA  L R++I +GV   +++YN L+ 
Sbjct: 246 AHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILID 305

Query: 377 GLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEF 436
           G  ++G   +A KLF E+    +EPD  +Y+ +ID LC+   V  A  +F  +  N    
Sbjct: 306 GYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAP 365

Query: 437 GIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFL 496
              +   L+ GLC+  RL  + ELF  + +   VP +  Y+++++ LC+  + +   +  
Sbjct: 366 DAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIF 425

Query: 497 LYMEKNGCAPNV 508
             + + G +P+V
Sbjct: 426 HELTERGFSPDV 437



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 126/391 (32%), Positives = 193/391 (49%), Gaps = 42/391 (10%)

Query: 194 FSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIE 253
            SY+ +++ L K G  D     + +M   G  P       L+   C A  +EE   +F  
Sbjct: 18  LSYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRG 77

Query: 254 MLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGR 313
           M   G  PN+ +++++I  LC+G K++EA  LL  MI  G  P+  TY SL+ G C +G+
Sbjct: 78  MAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGK 137

Query: 314 IDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNT 373
           +  A ++F  M  +GC    V YN+LI+G+ K  ++ EA  L+ +++  G   TV TYN+
Sbjct: 138 LKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNS 197

Query: 374 LLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLF------- 426
           LLSG  + G+ G  Q LF +M      P++ T+N L+DG CK   + EA +LF       
Sbjct: 198 LLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLG 257

Query: 427 ---------------------H-----MLEMNKFEFGIEI--FNCLIDGLCKAGRLDNAW 458
                                H     + EM +   G +I  +N LIDG  K+G LD+A 
Sbjct: 258 CPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAI 317

Query: 459 ELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGF 518
           +LF+++P+ GL P   +YS +I  LCR GK+  A      M  NG AP+      L+ G 
Sbjct: 318 KLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGL 377

Query: 519 LQNNKTSKVVELLHKMAE-------PERNLV 542
            +  + ++  EL   M +       PE NL+
Sbjct: 378 CRGERLTESCELFQAMVKFECVPLIPEYNLL 408



 Score =  191 bits (486), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 116/403 (28%), Positives = 201/403 (49%), Gaps = 13/403 (3%)

Query: 55  NLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLN 114
              EAR  F  M     SP + S+++L   + + +  D       +++  G  P+ +T  
Sbjct: 67  RFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYG 126

Query: 115 ILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRL 174
            L++       GLC   ++KEA  LF  M+  G  PD + Y  LI+GF + G++  A RL
Sbjct: 127 SLLS-------GLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRL 179

Query: 175 HKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTL 234
            ++M+    E G I    +F+Y+ ++    ++G   + + LF +M  +G  P +     L
Sbjct: 180 FEEML----EKGCI--PTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNL 233

Query: 235 IHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGL 294
           + GFC  G+  E + LF+EM  LG  P+++++N +I  +C  GK +EA  LL  MI+ G+
Sbjct: 234 LDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGV 293

Query: 295 NPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMS 354
            PD  +YN L+DGY   G +D A ++F  +   G +    SY+ +I+  C+   V  A  
Sbjct: 294 GPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFV 353

Query: 355 LYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLC 414
           +++ +I+NG          L+ GL +  +   + +LF  M  +   P +  YN+L+  LC
Sbjct: 354 VFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLLMYKLC 413

Query: 415 KNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNA 457
           K     +  ++FH L    F   +EI   +++ L ++   D A
Sbjct: 414 KAKRSDDVCEIFHELTERGFSPDVEISKVILETLRRSDDKDAA 456



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 108/332 (32%), Positives = 166/332 (50%), Gaps = 37/332 (11%)

Query: 264 LTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLS 323
           L++N +++ L K G+ +   G    M+  G  P+ +TY  L+   C   R + AR +F  
Sbjct: 18  LSYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRG 77

Query: 324 MHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQ 383
           M ++GC   V SY+ILI G C+   V+EA  L  ++I  G +  V+TY +LLSGL + G+
Sbjct: 78  MAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGK 137

Query: 384 AGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLF-HMLEM----------- 431
              A  LF  M      PD   YN+LIDG  K   + EA +LF  MLE            
Sbjct: 138 LKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNS 197

Query: 432 ------NKFEFG-----------------IEIFNCLIDGLCKAGRLDNAWELFHKLPQKG 468
                  K EFG                 I  FN L+DG CK G +  A  LF ++   G
Sbjct: 198 LLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLG 257

Query: 469 LVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVV 528
             P VV+Y+ +I G+C KGK  +A   L  M ++G  P++V++N L+ G+ ++      +
Sbjct: 258 CPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAI 317

Query: 529 ELLHKMAEPERNLVPDDTTFSIVVDLLAKDEK 560
           +L +++  P+  L PD  ++S ++D L +  K
Sbjct: 318 KLFYEI--PKSGLEPDAFSYSTIIDCLCRAGK 347



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 85/282 (30%), Positives = 141/282 (50%), Gaps = 6/282 (2%)

Query: 295 NPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMS 354
           N    +YN L++     GR D     +  M + GC     +Y  L+   C+    EEA S
Sbjct: 14  NHGTLSYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARS 73

Query: 355 LYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLC 414
           ++R + + G    V +Y+ L++GL +  +   A +L +EM     +P++ TY  L+ GLC
Sbjct: 74  VFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLC 133

Query: 415 KNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVV 474
           K   ++EAV LF  +          ++N LIDG  K G +  A+ LF ++ +KG +PTV 
Sbjct: 134 KMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVF 193

Query: 475 TYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKM 534
           TY+ ++ G  RKG+  +       M + GC PN+ TFN L+ GF    K   +VE  H++
Sbjct: 194 TYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFC---KMGDMVE-AHRL 249

Query: 535 AEPERNL--VPDDTTFSIVVDLLAKDEKYHECSAVSKSSYRA 574
               R+L   PD  +++ ++  +    K HE   + +   R+
Sbjct: 250 FLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRS 291



 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 54/195 (27%), Positives = 85/195 (43%), Gaps = 15/195 (7%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
           N  +   C  G    +EA+     M      P I S+N+L    +K+   D  I  + ++
Sbjct: 266 NTLIRGMCSKG--KPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEI 323

Query: 102 VSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLING 161
              GL PD  + + +I+C       LC   ++  A  +FK+MIA G  PD      L+ G
Sbjct: 324 PKSGLEPDAFSYSTIIDC-------LCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIG 376

Query: 162 FCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKG 221
            CR   L+ +  L + MV  +    LI + N+  Y      LCK    D   E+F E+  
Sbjct: 377 LCRGERLTESCELFQAMVKFECVP-LIPEYNLLMY-----KLCKAKRSDDVCEIFHELTE 430

Query: 222 RGINPAVVVCTTLIH 236
           RG +P V +   ++ 
Sbjct: 431 RGFSPDVEISKVILE 445



 Score = 72.0 bits (175), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 40/143 (27%), Positives = 70/143 (48%), Gaps = 3/143 (2%)

Query: 434 FEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKAN 493
           +  G   +N L++ L K+GR D+ +  ++ +   G VP   TY  ++  LC+  + E+A 
Sbjct: 13  YNHGTLSYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEAR 72

Query: 494 DFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
                M   GC+PNV +++ L+ G  +  K  +  ELL++M +      P+  T+  ++ 
Sbjct: 73  SVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQ--PNVVTYGSLLS 130

Query: 554 LLAKDEKYHEC-SAVSKSSYRAC 575
            L K  K  E     S+  YR C
Sbjct: 131 GLCKMGKLKEAVDLFSRMVYRGC 153


>gi|357450627|ref|XP_003595590.1| hypothetical protein MTR_2g049740 [Medicago truncatula]
 gi|355484638|gb|AES65841.1| hypothetical protein MTR_2g049740 [Medicago truncatula]
          Length = 859

 Score =  239 bits (610), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 140/509 (27%), Positives = 252/509 (49%), Gaps = 37/509 (7%)

Query: 58  EARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILI 117
            A Y F  M+ +   P + S + L G + +       +  + ++V  G++PD    +I++
Sbjct: 174 HALYVFDEMSRIGRVPGLRSCSFLLGKLVQKGEGRVAVMVFDQIVGTGIVPDVYMCSIVV 233

Query: 118 NCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKK 177
           N         C   R+  A  + + M+  G+ P+V+TY  L+NG+   G+     R+ + 
Sbjct: 234 NAH-------CQVGRVDVAMEVLEKMVKEGLEPNVVTYNGLVNGYVGRGDFEGVERVLRL 286

Query: 178 MVSGDYENGLISKTNIFS------------------------------YSIIIDSLCKEG 207
           M        +++ T +                                Y +++D  C+ G
Sbjct: 287 MSERGVSRNVVTCTMLMRGYCKKGKMDEAEKLLREVEEDELLVVDERVYGVLVDGYCQMG 346

Query: 208 LVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFN 267
            ++ A  +  EM   G+   +V+C TLI G+C  G   E   +F+ M+D   +P+  ++N
Sbjct: 347 RMEDAVRIRDEMLRVGLKVNMVICNTLIKGYCKLGQVCEAERVFVGMVDWNLKPDCYSYN 406

Query: 268 VMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSK 327
            ++D  C+ GK+++A  L E M+  G+ P   TYN+++ G   VG  D A  ++  M  +
Sbjct: 407 TLLDGYCREGKVSKAFMLCEEMLGDGITPTVVTYNTVIKGLVDVGSYDDALHLWHLMVER 466

Query: 328 GCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYA 387
           G     +S   +++ + K+ + + AM L+++I+  G  ++ + +NT++SGL + G+   A
Sbjct: 467 GVTPNEISCCTMLDCFFKMGDSDRAMMLWKEILGRGFTKSTVAFNTMISGLCKMGKLMEA 526

Query: 388 QKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDG 447
             +FD MK   + PD  TY  L DG CKN  VQEA ++  ++E       IE++N LIDG
Sbjct: 527 GAVFDRMKELGLSPDEITYRTLSDGYCKNGNVQEAFQIKGVMERQAMSASIEMYNSLIDG 586

Query: 448 LCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPN 507
           L K  +L++  +L  ++  +GL P VVTY  +I G C + KL+KA      M + G  PN
Sbjct: 587 LFKIRKLNDVTDLLVEMQTRGLSPNVVTYGTLISGWCDEQKLDKAFHLYFEMIERGFTPN 646

Query: 508 VVTFNTLMHGFLQNNKTSKVVELLHKMAE 536
           VV  + ++    ++++ S+   +L KM +
Sbjct: 647 VVVCSKIVSSLYRDDRISEATVILDKMLD 675



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 143/511 (27%), Positives = 247/511 (48%), Gaps = 57/511 (11%)

Query: 80  LLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWL 139
           L+ G     R  DAV     +++ +GL  + +  N LI       +G C   ++ EA  +
Sbjct: 338 LVDGYCQMGRMEDAV-RIRDEMLRVGLKVNMVICNTLI-------KGYCKLGQVCEAERV 389

Query: 140 FKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSII 199
           F  M+ + ++PD  +Y TL++G+CR G +S A  L ++M+ GD     I+ T + +Y+ +
Sbjct: 390 FVGMVDWNLKPDCYSYNTLLDGYCREGKVSKAFMLCEEML-GDG----ITPT-VVTYNTV 443

Query: 200 IDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGP 259
           I  L   G  D A  L+  M  RG+ P  + C T++  F   G+ +    L+ E+L  G 
Sbjct: 444 IKGLVDVGSYDDALHLWHLMVERGVTPNEISCCTMLDCFFKMGDSDRAMMLWKEILGRGF 503

Query: 260 RPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTARE 319
             + + FN MI  LCK GK+ EA  + + M + GL+PD  TY +L DGYC  G +  A +
Sbjct: 504 TKSTVAFNTMISGLCKMGKLMEAGAVFDRMKELGLSPDEITYRTLSDGYCKNGNVQEAFQ 563

Query: 320 I-----------------------------------FLSMHSKGCKHTVVSYNILINGYC 344
           I                                    + M ++G    VV+Y  LI+G+C
Sbjct: 564 IKGVMERQAMSASIEMYNSLIDGLFKIRKLNDVTDLLVEMQTRGLSPNVVTYGTLISGWC 623

Query: 345 KILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLS 404
               +++A  LY ++I  G    V+  + ++S L++  +   A  + D+M  +++   L+
Sbjct: 624 DEQKLDKAFHLYFEMIERGFTPNVVVCSKIVSSLYRDDRISEATVILDKMLDFDI---LA 680

Query: 405 TYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIE---IFNCLIDGLCKAGRLDNAWELF 461
            +N   D L KN+   EA K+   L+ +     +    ++N  IDGLCK+G+LD A  + 
Sbjct: 681 VHNKCSDKLVKNDLTLEAQKIADSLDKSDICNSLSNNIVYNIAIDGLCKSGKLDEARSVL 740

Query: 462 HKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQN 521
             L  +G +P   TY  +IH     G +++A      M + G  PN+  +N L++G  + 
Sbjct: 741 SVLMSRGFLPDNFTYCTLIHACSVSGNVDEAFKLRDEMLEKGLIPNITIYNALINGLCKL 800

Query: 522 NKTSKVVELLHKMAEPERNLVPDDTTFSIVV 552
               +   L +K+   ++ LVP+  T++I++
Sbjct: 801 GNIDRAQRLFYKLY--QKGLVPNAVTYNILI 829



 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 118/438 (26%), Positives = 209/438 (47%), Gaps = 48/438 (10%)

Query: 72  SPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCF---GNKER--- 125
           +P + ++N +   +     YD  +  +  +V  G+ P+ ++   +++CF   G+ +R   
Sbjct: 434 TPTVVTYNTVIKGLVDVGSYDDALHLWHLMVERGVTPNEISCCTMLDCFFKMGDSDRAMM 493

Query: 126 ----------------------GLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFC 163
                                 GLC   ++ EA  +F  M   G+ PD ITY TL +G+C
Sbjct: 494 LWKEILGRGFTKSTVAFNTMISGLCKMGKLMEAGAVFDRMKELGLSPDEITYRTLSDGYC 553

Query: 164 RTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRG 223
           + GN+  A +     + G  E   +S  +I  Y+ +ID L K   ++   +L +EM+ RG
Sbjct: 554 KNGNVQEAFQ-----IKGVMERQAMS-ASIEMYNSLIDGLFKIRKLNDVTDLLVEMQTRG 607

Query: 224 INPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEAN 283
           ++P VV   TLI G+C     ++   L+ EM++ G  PN++  + ++  L +  +I+EA 
Sbjct: 608 LSPNVVTYGTLISGWCDEQKLDKAFHLYFEMIERGFTPNVVVCSKIVSSLYRDDRISEAT 667

Query: 284 GLLELMIQRGL------NPDRFTYNSL-MDGYCLVGRIDTAREIFLSMHSKGCKHTVVSY 336
            +L+ M+   +        D+   N L ++   +   +D + +I  S+ +       + Y
Sbjct: 668 VILDKMLDFDILAVHNKCSDKLVKNDLTLEAQKIADSLDKS-DICNSLSNN------IVY 720

Query: 337 NILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKL 396
           NI I+G CK   ++EA S+   ++S G      TY TL+     +G    A KL DEM  
Sbjct: 721 NIAIDGLCKSGKLDEARSVLSVLMSRGFLPDNFTYCTLIHACSVSGNVDEAFKLRDEMLE 780

Query: 397 YNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDN 456
             + P+++ YN LI+GLCK   +  A +LF+ L           +N LI   C+ G LD 
Sbjct: 781 KGLIPNITIYNALINGLCKLGNIDRAQRLFYKLYQKGLVPNAVTYNILIGCYCRIGDLDK 840

Query: 457 AWELFHKLPQKGLVPTVV 474
           A  L  K+ ++G+   ++
Sbjct: 841 ASRLREKMTEEGISTRII 858



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 132/528 (25%), Positives = 239/528 (45%), Gaps = 31/528 (5%)

Query: 68  HMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSI----GLLPDFLT-LNILINCF-G 121
            + PS  +S F+L      +N HY      Y  L+ I     L P+  T L  L++    
Sbjct: 78  RLHPSACLSFFHL----ATQNSHYRPHSLSYSILLHILTHARLFPEATTVLRQLMDLHCT 133

Query: 122 NKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSG 181
           N  R   V N +      F     FG    V  +  L+  F   G    AL +  +M   
Sbjct: 134 NNYRAYAVCNHV------FSVYKEFGFCSGV--FDMLMKAFAERGMTKHALYVFDEMSRI 185

Query: 182 DYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCA 241
               GL       S S ++  L ++G    A  +F ++ G GI P V +C+ +++  C  
Sbjct: 186 GRVPGL------RSCSFLLGKLVQKGEGRVAVMVFDQIVGTGIVPDVYMCSIVVNAHCQV 239

Query: 242 GNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTY 301
           G  +    +  +M+  G  PN++T+N +++     G       +L LM +RG++ +  T 
Sbjct: 240 GRVDVAMEVLEKMVKEGLEPNVVTYNGLVNGYVGRGDFEGVERVLRLMSERGVSRNVVTC 299

Query: 302 NSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVS---YNILINGYCKILNVEEAMSLYRQ 358
             LM GYC  G++D A ++   +     +  VV    Y +L++GYC++  +E+A+ +  +
Sbjct: 300 TMLMRGYCKKGKMDEAEKLLREVEED--ELLVVDERVYGVLVDGYCQMGRMEDAVRIRDE 357

Query: 359 IISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNC 418
           ++  G++  ++  NTL+ G  + GQ   A+++F  M  +N++PD  +YN L+DG C+   
Sbjct: 358 MLRVGLKVNMVICNTLIKGYCKLGQVCEAERVFVGMVDWNLKPDCYSYNTLLDGYCREGK 417

Query: 419 VQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSI 478
           V +A  L   +  +     +  +N +I GL   G  D+A  L+H + ++G+ P  ++   
Sbjct: 418 VSKAFMLCEEMLGDGITPTVVTYNTVIKGLVDVGSYDDALHLWHLMVERGVTPNEISCCT 477

Query: 479 MIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPE 538
           M+    + G  ++A      +   G   + V FNT++ G  +  K  +   +  +M E  
Sbjct: 478 MLDCFFKMGDSDRAMMLWKEILGRGFTKSTVAFNTMISGLCKMGKLMEAGAVFDRMKEL- 536

Query: 539 RNLVPDDTTFSIVVDLLAKDEKYHECSAVSKSSYRACLYVTIFQPSSL 586
             L PD+ T+  + D   K+    E   +     R  +  +I   +SL
Sbjct: 537 -GLSPDEITYRTLSDGYCKNGNVQEAFQIKGVMERQAMSASIEMYNSL 583



 Score =  122 bits (305), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 92/315 (29%), Positives = 141/315 (44%), Gaps = 38/315 (12%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CK+G  N+ EA    G M     S  I  +N L   + K R  + V     ++ + GL P
Sbjct: 553 CKNG--NVQEAFQIKGVMERQAMSASIEMYNSLIDGLFKIRKLNDVTDLLVEMQTRGLSP 610

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           + +T   LI+       G C E ++ +A  L+  MI  G  P+V+    +++   R   +
Sbjct: 611 NVVTYGTLIS-------GWCDEQKLDKAFHLYFEMIERGFTPNVVVCSKIVSSLYRDDRI 663

Query: 169 SVALRLHKKMVSGD------------YENGLI-----------------SKTNIFSYSII 199
           S A  +  KM+  D             +N L                  S +N   Y+I 
Sbjct: 664 SEATVILDKMLDFDILAVHNKCSDKLVKNDLTLEAQKIADSLDKSDICNSLSNNIVYNIA 723

Query: 200 IDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGP 259
           ID LCK G +D+A+ +   +  RG  P      TLIH    +GN +E   L  EML+ G 
Sbjct: 724 IDGLCKSGKLDEARSVLSVLMSRGFLPDNFTYCTLIHACSVSGNVDEAFKLRDEMLEKGL 783

Query: 260 RPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTARE 319
            PN+  +N +I+ LCK G I+ A  L   + Q+GL P+  TYN L+  YC +G +D A  
Sbjct: 784 IPNITIYNALINGLCKLGNIDRAQRLFYKLYQKGLVPNAVTYNILIGCYCRIGDLDKASR 843

Query: 320 IFLSMHSKGCKHTVV 334
           +   M  +G    ++
Sbjct: 844 LREKMTEEGISTRII 858


>gi|357443403|ref|XP_003591979.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355481027|gb|AES62230.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 873

 Score =  239 bits (609), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 156/509 (30%), Positives = 251/509 (49%), Gaps = 19/509 (3%)

Query: 41  LNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRK 100
            N  +H  C     N  EA      M      P   ++N +  A+ K      V     +
Sbjct: 214 FNILIHGYCSDN--NTEEALRLINQMGEYGCCPDNVTYNTVLTALCKRSQLTQVRDLLLQ 271

Query: 101 LVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLIN 160
           + + GL P+  T NIL++       G C    +KEA  + + M   G+ PDV TY T++ 
Sbjct: 272 MKNSGLFPNRNTYNILVH-------GYCKLKWLKEAAEVIELMTGKGMLPDVWTYNTMVR 324

Query: 161 GFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMK 220
           G C  G +  A+RL  KM S      L+   ++ +Y+ +ID   +    D A +L  EMK
Sbjct: 325 GLCDEGKIDEAVRLRDKMESFK----LVP--DVVTYNTLIDGCFEHRGSDAAFKLVEEMK 378

Query: 221 GRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKIN 280
            RG+    V    +I  FC  G  +E + + ++M++ G  P+  T+N MI+  CK GK+ 
Sbjct: 379 ARGVKENGVTHNIMIKWFCTEGKIDEASNVMVKMVESGFSPDCFTYNTMINGYCKAGKMA 438

Query: 281 EANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILI 340
           EA  +++ M ++GL  D FT N+L+   CL  ++D A  + +    +G     V+Y  LI
Sbjct: 439 EAYKMMDEMGRKGLKLDTFTLNTLLHTMCLEKQLDDAYTLTMKARKRGYILDEVTYGTLI 498

Query: 341 NGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVE 400
            GY K    + A+ L+ ++   G+  T+ITYNT++ GL  +G+   A    +E+    + 
Sbjct: 499 MGYFKDEQADRALKLWEEMKETGIVATIITYNTIIRGLCLSGKTDQAVDKLNELLEKGLV 558

Query: 401 PDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNC--LIDGLCKAGRLDNAW 458
           PD ST NI+I G C    V++A + FH  +M +     +IF C  L+ GLC+ G L+   
Sbjct: 559 PDESTSNIIIHGYCWEGAVEKAFQ-FHN-KMVEHSLKPDIFTCNILLRGLCREGMLEKGL 616

Query: 459 ELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGF 518
            LF+    KG     VTY+I+I   C++ +LE A D +  ME     P+  T+N ++ G 
Sbjct: 617 TLFNTWISKGKPMDTVTYNIIISSFCKERRLEDAFDLMTEMEGKNLEPDRYTYNAIVTGL 676

Query: 519 LQNNKTSKVVELLHKMAEPERNLVPDDTT 547
            +  +T +  +L  K AE  + +   DT+
Sbjct: 677 TKAGRTEEAEKLALKFAEKGQQVKTQDTS 705



 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 131/462 (28%), Positives = 220/462 (47%), Gaps = 26/462 (5%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           C  G I+  EA      M   +  P + ++N L     ++R  DA      ++ + G+  
Sbjct: 327 CDEGKID--EAVRLRDKMESFKLVPDVVTYNTLIDGCFEHRGSDAAFKLVEEMKARGVKE 384

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           + +T NI+I  F       C E +I EA+ +   M+  G  PD  TY T+ING+C+ G +
Sbjct: 385 NGVTHNIMIKWF-------CTEGKIDEASNVMVKMVESGFSPDCFTYNTMINGYCKAGKM 437

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
           + A ++  +M       GL  K + F+ + ++ ++C E  +D A  L ++ + RG     
Sbjct: 438 AEAYKMMDEMG----RKGL--KLDTFTLNTLLHTMCLEKQLDDAYTLTMKARKRGYILDE 491

Query: 229 VVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLEL 288
           V   TLI G+      +    L+ EM + G    ++T+N +I  LC  GK ++A   L  
Sbjct: 492 VTYGTLIMGYFKDEQADRALKLWEEMKETGIVATIITYNTIIRGLCLSGKTDQAVDKLNE 551

Query: 289 MIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILN 348
           ++++GL PD  T N ++ GYC  G ++ A +    M     K  + + NIL+ G C+   
Sbjct: 552 LLEKGLVPDESTSNIIIHGYCWEGAVEKAFQFHNKMVEHSLKPDIFTCNILLRGLCREGM 611

Query: 349 VEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNI 408
           +E+ ++L+   IS G     +TYN ++S   +  +   A  L  EM+  N+EPD  TYN 
Sbjct: 612 LEKGLTLFNTWISKGKPMDTVTYNIIISSFCKERRLEDAFDLMTEMEGKNLEPDRYTYNA 671

Query: 409 LIDGLCKNNCVQEAVKL-FHMLEMNKF--------EFGIE--IFNCLIDGLCKAGRLDNA 457
           ++ GL K    +EA KL     E  +         E G    +++  I  LC  G+  +A
Sbjct: 672 IVTGLTKAGRTEEAEKLALKFAEKGQQVKTQDTSPELGTSDMMYSEQISSLCTQGKYKDA 731

Query: 458 WELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYM 499
            +LF +  QKG+     TY  ++ GL ++ K       L +M
Sbjct: 732 MKLFQQAEQKGVSLNKYTYIKLMDGLLKRRKSFTTTSLLPFM 773



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 118/416 (28%), Positives = 216/416 (51%), Gaps = 9/416 (2%)

Query: 139 LFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSI 198
           +F  M     RP+++T  TL+N   R+ N S +L   +++     + G+  + N+ +++I
Sbjct: 160 IFNKMKRLRFRPNLLTCNTLLNALVRS-NSSHSLVFSREVFQDAVKLGV--QPNVNTFNI 216

Query: 199 IIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLG 258
           +I   C +   ++A  L  +M   G  P  V   T++   C      +V  L ++M + G
Sbjct: 217 LIHGYCSDNNTEEALRLINQMGEYGCCPDNVTYNTVLTALCKRSQLTQVRDLLLQMKNSG 276

Query: 259 PRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAR 318
             PN  T+N+++   CK   + EA  ++ELM  +G+ PD +TYN+++ G C  G+ID A 
Sbjct: 277 LFPNRNTYNILVHGYCKLKWLKEAAEVIELMTGKGMLPDVWTYNTMVRGLCDEGKIDEAV 336

Query: 319 EIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGL 378
            +   M S      VV+YN LI+G  +    + A  L  ++ + GV++  +T+N ++   
Sbjct: 337 RLRDKMESFKLVPDVVTYNTLIDGCFEHRGSDAAFKLVEEMKARGVKENGVTHNIMIKWF 396

Query: 379 FQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGI 438
              G+   A  +  +M      PD  TYN +I+G CK   + EA K+  M EM +    +
Sbjct: 397 CTEGKIDEASNVMVKMVESGFSPDCFTYNTMINGYCKAGKMAEAYKM--MDEMGRKGLKL 454

Query: 439 EIF--NCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFL 496
           + F  N L+  +C   +LD+A+ L  K  ++G +   VTY  +I G  +  + ++A    
Sbjct: 455 DTFTLNTLLHTMCLEKQLDDAYTLTMKARKRGYILDEVTYGTLIMGYFKDEQADRALKLW 514

Query: 497 LYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVV 552
             M++ G    ++T+NT++ G   + KT + V+ L+++   E+ LVPD++T +I++
Sbjct: 515 EEMKETGIVATIITYNTIIRGLCLSGKTDQAVDKLNELL--EKGLVPDESTSNIII 568



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 55/203 (27%), Positives = 98/203 (48%), Gaps = 19/203 (9%)

Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNC----------VQE 421
           +T L+    + Q     ++F++MK     P+L T N L++ L ++N            Q+
Sbjct: 142 DTSLAAYVISKQPHLGHQIFNKMKRLRFRPNLLTCNTLLNALVRSNSSHSLVFSREVFQD 201

Query: 422 AVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIH 481
           AVKL         +  +  FN LI G C     + A  L +++ + G  P  VTY+ ++ 
Sbjct: 202 AVKL-------GVQPNVNTFNILIHGYCSDNNTEEALRLINQMGEYGCCPDNVTYNTVLT 254

Query: 482 GLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNL 541
            LC++ +L +  D LL M+ +G  PN  T+N L+HG+ +     +  E++  M    + +
Sbjct: 255 ALCKRSQLTQVRDLLLQMKNSGLFPNRNTYNILVHGYCKLKWLKEAAEVIELMT--GKGM 312

Query: 542 VPDDTTFSIVVDLLAKDEKYHEC 564
           +PD  T++ +V  L  + K  E 
Sbjct: 313 LPDVWTYNTMVRGLCDEGKIDEA 335


>gi|357498925|ref|XP_003619751.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494766|gb|AES75969.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 562

 Score =  239 bits (609), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 127/343 (37%), Positives = 194/343 (56%), Gaps = 19/343 (5%)

Query: 185 NGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNW 244
           +G + + N+  Y+ IIDS+CK+ L + A +L+ EM  + I P V     LI+GFC  G  
Sbjct: 233 DGKLLQPNLVMYNTIIDSMCKDKLDNDAFDLYSEMVSKRIFPDVNTYNALINGFCIVGKL 292

Query: 245 EEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSL 304
           ++  GLF +M      P++ TFN+++D  CK G++ EA   L +M+++G+ PD  TYNSL
Sbjct: 293 KDAIGLFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDVVTYNSL 352

Query: 305 MDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGV 364
           MD YCLV  ++ A+ IF +M  +G    V SY+I+IN +CKI  V++AM L++++    +
Sbjct: 353 MDRYCLVNEVNKAKSIFNTMSHRGVTANVRSYSIMINRFCKIKMVDQAMKLFKEMHHKQI 412

Query: 365 RQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVK 424
              VITY++L+ GL ++G+  YA +L DEM     +PD+ T                   
Sbjct: 413 FPNVITYSSLIDGLCKSGRISYALELNDEMHDRGQQPDIIT------------------- 453

Query: 425 LFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLC 484
           L   L+       +  +  LIDGLCK GRL++A  +F  L  KG   TV TY++MIHG C
Sbjct: 454 LTRQLKDQGIRPNMFTYTILIDGLCKGGRLEDARNIFEDLLVKGYNITVNTYTVMIHGFC 513

Query: 485 RKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKV 527
            KG  ++A   L  M+ N C PN VT+  ++     N++  K 
Sbjct: 514 NKGLFDEAMTLLSKMKDNCCIPNAVTYEIIIRSLFDNDENDKA 556



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 97/317 (30%), Positives = 169/317 (53%), Gaps = 19/317 (5%)

Query: 260 RPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTARE 319
           +PNL+ +N +ID +CK    N+A  L   M+ + + PD  TYN+L++G+C+VG++  A  
Sbjct: 238 QPNLVMYNTIIDSMCKDKLDNDAFDLYSEMVSKRIFPDVNTYNALINGFCIVGKLKDAIG 297

Query: 320 IFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLF 379
           +F  M S+     V ++NIL++ +CK   V+EA +    ++  G++  V+TYN+L+    
Sbjct: 298 LFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDVVTYNSLMDRYC 357

Query: 380 QAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIE 439
              +   A+ +F+ M    V  ++ +Y+I+I+  CK   V +A+KLF  +   +    + 
Sbjct: 358 LVNEVNKAKSIFNTMSHRGVTANVRSYSIMINRFCKIKMVDQAMKLFKEMHHKQIFPNVI 417

Query: 440 IFNCLIDGLCKAGRLDNAWEL----------------FHKLPQKGLVPTVVTYSIMIHGL 483
            ++ LIDGLCK+GR+  A EL                  +L  +G+ P + TY+I+I GL
Sbjct: 418 TYSSLIDGLCKSGRISYALELNDEMHDRGQQPDIITLTRQLKDQGIRPNMFTYTILIDGL 477

Query: 484 CRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVP 543
           C+ G+LE A +    +   G    V T+  ++HGF       + + LL KM   +   +P
Sbjct: 478 CKGGRLEDARNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEAMTLLSKMK--DNCCIP 535

Query: 544 DDTTFSIVV-DLLAKDE 559
           +  T+ I++  L   DE
Sbjct: 536 NAVTYEIIIRSLFDNDE 552



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 108/407 (26%), Positives = 184/407 (45%), Gaps = 71/407 (17%)

Query: 93  AVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDV 152
           A +   R++    L P+ +  N +I+        +C +    +A  L+  M++  + PDV
Sbjct: 224 APLQLLRRVDGKLLQPNLVMYNTIID-------SMCKDKLDNDAFDLYSEMVSKRIFPDV 276

Query: 153 ITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKA 212
            TY  LINGFC  G L  A+ L  KM S +         ++++++I++D+ CKEG V +A
Sbjct: 277 NTYNALINGFCIVGKLKDAIGLFNKMTSENI------NPDVYTFNILVDAFCKEGRVKEA 330

Query: 213 KELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDC 272
           K     M  +GI P VV   +L+  +C      +   +F  M   G   N+ ++++MI+ 
Sbjct: 331 KNGLAMMMKQGIKPDVVTYNSLMDRYCLVNEVNKAKSIFNTMSHRGVTANVRSYSIMINR 390

Query: 273 LCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHT 332
            CK   +++A  L + M  + + P+  TY+SL+DG C  GRI  A E+   MH +G +  
Sbjct: 391 FCKIKMVDQAMKLFKEMHHKQIFPNVITYSSLIDGLCKSGRISYALELNDEMHDRGQQPD 450

Query: 333 VVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFD 392
           ++                   +L RQ+   G+R  + TY  L+ GL + G+   A+ +F+
Sbjct: 451 II-------------------TLTRQLKDQGIRPNMFTYTILIDGLCKGGRLEDARNIFE 491

Query: 393 EM--KLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCK 450
           ++  K YN+   ++TY ++I G C                                    
Sbjct: 492 DLLVKGYNIT--VNTYTVMIHGFC-----------------------------------N 514

Query: 451 AGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLL 497
            G  D A  L  K+     +P  VTY I+I  L    + +KA +F +
Sbjct: 515 KGLFDEAMTLLSKMKDNCCIPNAVTYEIIIRSLFDNDENDKAENFFV 561



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 100/336 (29%), Positives = 166/336 (49%), Gaps = 29/336 (8%)

Query: 72  SPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVEN 131
            P +  +N +  ++ K++  +     Y ++VS  + PD  T N LIN       G C+  
Sbjct: 238 QPNLVMYNTIIDSMCKDKLDNDAFDLYSEMVSKRIFPDVNTYNALIN-------GFCIVG 290

Query: 132 RIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKT 191
           ++K+A  LF  M +  + PDV T+  L++ FC+ G +  A    K  ++   + G+  K 
Sbjct: 291 KLKDAIGLFNKMTSENINPDVYTFNILVDAFCKEGRVKEA----KNGLAMMMKQGI--KP 344

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
           ++ +Y+ ++D  C    V+KAK +F  M  RG+   V   + +I+ FC     ++   LF
Sbjct: 345 DVVTYNSLMDRYCLVNEVNKAKSIFNTMSHRGVTANVRSYSIMINRFCKIKMVDQAMKLF 404

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPD-------------- 297
            EM      PN++T++ +ID LCK G+I+ A  L + M  RG  PD              
Sbjct: 405 KEMHHKQIFPNVITYSSLIDGLCKSGRISYALELNDEMHDRGQQPDIITLTRQLKDQGIR 464

Query: 298 --RFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSL 355
              FTY  L+DG C  GR++ AR IF  +  KG   TV +Y ++I+G+C     +EAM+L
Sbjct: 465 PNMFTYTILIDGLCKGGRLEDARNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEAMTL 524

Query: 356 YRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLF 391
             ++  N      +TY  ++  LF   +   A+  F
Sbjct: 525 LSKMKDNCCIPNAVTYEIIIRSLFDNDENDKAENFF 560



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 88/300 (29%), Positives = 146/300 (48%), Gaps = 29/300 (9%)

Query: 57  NEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNIL 116
           N+A   +  M   +  P ++++N L             I  + K+ S  + PD  T NIL
Sbjct: 258 NDAFDLYSEMVSKRIFPDVNTYNALINGFCIVGKLKDAIGLFNKMTSENINPDVYTFNIL 317

Query: 117 INCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHK 176
           ++ F       C E R+KEA      M+  G++PDV+TY +L++ +C    ++ A  +  
Sbjct: 318 VDAF-------CKEGRVKEAKNGLAMMMKQGIKPDVVTYNSLMDRYCLVNEVNKAKSIFN 370

Query: 177 KMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIH 236
            M       G+ +  N+ SYSI+I+  CK  +VD+A +LF EM  + I P V+  ++LI 
Sbjct: 371 TM----SHRGVTA--NVRSYSIMINRFCKIKMVDQAMKLFKEMHHKQIFPNVITYSSLID 424

Query: 237 GFCCA----------------GNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKIN 280
           G C +                G   ++  L  ++ D G RPN+ T+ ++ID LCKGG++ 
Sbjct: 425 GLCKSGRISYALELNDEMHDRGQQPDIITLTRQLKDQGIRPNMFTYTILIDGLCKGGRLE 484

Query: 281 EANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILI 340
           +A  + E ++ +G N    TY  ++ G+C  G  D A  +   M    C    V+Y I+I
Sbjct: 485 DARNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEAMTLLSKMKDNCCIPNAVTYEIII 544



 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 76/269 (28%), Positives = 126/269 (46%), Gaps = 38/269 (14%)

Query: 56  LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNI 115
           L +A   F  MT    +P + +FN+L  A  K        +    ++  G+ PD +T N 
Sbjct: 292 LKDAIGLFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDVVTYNS 351

Query: 116 LIN--CFGNK------------ERGLCVENR--------------IKEATWLFKNMIAFG 147
           L++  C  N+             RG+    R              + +A  LFK M    
Sbjct: 352 LMDRYCLVNEVNKAKSIFNTMSHRGVTANVRSYSIMINRFCKIKMVDQAMKLFKEMHHKQ 411

Query: 148 VRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKT----------NIFSYS 197
           + P+VITY +LI+G C++G +S AL L+ +M     +  +I+ T          N+F+Y+
Sbjct: 412 IFPNVITYSSLIDGLCKSGRISYALELNDEMHDRGQQPDIITLTRQLKDQGIRPNMFTYT 471

Query: 198 IIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDL 257
           I+ID LCK G ++ A+ +F ++  +G N  V   T +IHGFC  G ++E   L  +M D 
Sbjct: 472 ILIDGLCKGGRLEDARNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEAMTLLSKMKDN 531

Query: 258 GPRPNLLTFNVMIDCLCKGGKINEANGLL 286
              PN +T+ ++I  L    + ++A    
Sbjct: 532 CCIPNAVTYEIIIRSLFDNDENDKAENFF 560



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 55/212 (25%), Positives = 114/212 (53%), Gaps = 2/212 (0%)

Query: 399 VEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAW 458
           ++P+L  YN +ID +CK+    +A  L+  +   +    +  +N LI+G C  G+L +A 
Sbjct: 237 LQPNLVMYNTIIDSMCKDKLDNDAFDLYSEMVSKRIFPDVNTYNALINGFCIVGKLKDAI 296

Query: 459 ELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGF 518
            LF+K+  + + P V T++I++   C++G++++A + L  M K G  P+VVT+N+LM  +
Sbjct: 297 GLFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDVVTYNSLMDRY 356

Query: 519 LQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKSSYRACLYV 578
              N+ +K   + + M+   R +  +  ++SI+++   K +   +   + K  +   ++ 
Sbjct: 357 CLVNEVNKAKSIFNTMS--HRGVTANVRSYSIMINRFCKIKMVDQAMKLFKEMHHKQIFP 414

Query: 579 TIFQPSSLGSMIGCTVRLMPQPEMSDTLGDDG 610
            +   SSL   +  + R+    E++D + D G
Sbjct: 415 NVITYSSLIDGLCKSGRISYALELNDEMHDRG 446



 Score = 89.4 bits (220), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 53/211 (25%), Positives = 105/211 (49%), Gaps = 2/211 (0%)

Query: 347 LNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTY 406
           L+    + L R++    ++  ++ YNT++  + +      A  L+ EM    + PD++TY
Sbjct: 220 LSQRAPLQLLRRVDGKLLQPNLVMYNTIIDSMCKDKLDNDAFDLYSEMVSKRIFPDVNTY 279

Query: 407 NILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQ 466
           N LI+G C    +++A+ LF+ +        +  FN L+D  CK GR+  A      + +
Sbjct: 280 NALINGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMK 339

Query: 467 KGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSK 526
           +G+ P VVTY+ ++   C   ++ KA      M   G   NV +++ +++ F +     +
Sbjct: 340 QGIKPDVVTYNSLMDRYCLVNEVNKAKSIFNTMSHRGVTANVRSYSIMINRFCKIKMVDQ 399

Query: 527 VVELLHKMAEPERNLVPDDTTFSIVVDLLAK 557
            ++L  +M    + + P+  T+S ++D L K
Sbjct: 400 AMKLFKEMH--HKQIFPNVITYSSLIDGLCK 428



 Score = 66.6 bits (161), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 51/216 (23%), Positives = 92/216 (42%), Gaps = 33/216 (15%)

Query: 56  LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNI 115
           +N+A+  F  M+H   +  + S++++     K +  D  +  ++++    + P+ +T + 
Sbjct: 362 VNKAKSIFNTMSHRGVTANVRSYSIMINRFCKIKMVDQAMKLFKEMHHKQIFPNVITYSS 421

Query: 116 LINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVIT----------------YGTLI 159
           LI+       GLC   RI  A  L   M   G +PD+IT                Y  LI
Sbjct: 422 LID-------GLCKSGRISYALELNDEMHDRGQQPDIITLTRQLKDQGIRPNMFTYTILI 474

Query: 160 NGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIF--SYSIIIDSLCKEGLVDKAKELFL 217
           +G C+ G L  A  +        +E+ L+   NI   +Y+++I   C +GL D+A  L  
Sbjct: 475 DGLCKGGRLEDARNI--------FEDLLVKGYNITVNTYTVMIHGFCNKGLFDEAMTLLS 526

Query: 218 EMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIE 253
           +MK     P  V    +I         ++    F++
Sbjct: 527 KMKDNCCIPNAVTYEIIIRSLFDNDENDKAENFFVK 562


>gi|359487666|ref|XP_002277942.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Vitis vinifera]
          Length = 609

 Score =  238 bits (608), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 161/557 (28%), Positives = 266/557 (47%), Gaps = 30/557 (5%)

Query: 11  FSSETVSKVKLSSLFKSPRQIAAVSSPETQLNEFLHENCKSGII------------NLNE 58
           F + T+S++     +   + I   ++P + L    +   +  +I             ++ 
Sbjct: 47  FDTPTISQLIAKQHWSKLKTIVKETNPSSLLQHLFNSEAQPDLILCYFKWTQKEFGAIHN 106

Query: 59  ARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLV--SIGLLPDFLTLNIL 116
              F   +  +  +   +    L  + AKN HY     F+   V  S G     +   ++
Sbjct: 107 VEQFCRLLHLLANAKNYNKIRALLDSFAKNAHYSNSTIFHSLSVLGSWGCANSIIVDMLV 166

Query: 117 INCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHK 176
                N E  L +E         F     +G R   ++   ++    + G + V   ++K
Sbjct: 167 WAYVKNGEMDLALEG--------FDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESVYK 218

Query: 177 KMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIH 236
           +M+            N+ ++ ++I+ LCK G   KA ++  +MK  G +P+V+   T+I 
Sbjct: 219 EMIRRRI------GVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIID 272

Query: 237 GFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNP 296
           G+C AG   + + L  EM+     PN +TFN++ID  C+   +  A  + E M ++GL P
Sbjct: 273 GYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQP 332

Query: 297 DRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLY 356
           +  TYNSL++G C  G++D A  +   M   G K  VV+YN LING+CK   ++EA  + 
Sbjct: 333 NVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREML 392

Query: 357 RQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKN 416
             I   G+   VIT+NTL+    +AG+   A  L   M    V P++STYN LI G C+ 
Sbjct: 393 DDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCRE 452

Query: 417 NCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTY 476
             V+EA KL   +E N  +  +  +N L+D LCK G    A  L  ++ + GL P+ +TY
Sbjct: 453 GNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMFEVGLNPSHLTY 512

Query: 477 SIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAE 536
           + +I G  R+G    A +    MEK G   N+VT+N L+ GF    K  +   LL++M  
Sbjct: 513 NALIDGYFREGNSTAALNVRTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEML- 571

Query: 537 PERNLVPDDTTFSIVVD 553
            E+ L+P+ TT+ I+ D
Sbjct: 572 -EKGLIPNRTTYDILRD 587



 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 135/411 (32%), Positives = 226/411 (54%), Gaps = 13/411 (3%)

Query: 77  SFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEA 136
           S N +  ++ K      V S Y++++   +  + +T +++IN       GLC   + ++A
Sbjct: 196 SCNPMLVSLVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVIN-------GLCKVGKFQKA 248

Query: 137 TWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSY 196
             + ++M A+G  P VITY T+I+G+C+ G +  A  L K+MV+           N  ++
Sbjct: 249 GDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIH------PNEITF 302

Query: 197 SIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLD 256
           +I+ID  C++  V  AK++F EM+ +G+ P VV   +LI+G C  G  +E  GL  +M  
Sbjct: 303 NILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSG 362

Query: 257 LGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDT 316
           +G +PN++T+N +I+  CK   + EA  +L+ + +RGL P+  T+N+L+D Y   GR+D 
Sbjct: 363 MGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDD 422

Query: 317 AREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLS 376
           A  +   M   G    V +YN LI G+C+  NV+EA  L +++  NG++  ++TYN L+ 
Sbjct: 423 AFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVD 482

Query: 377 GLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEF 436
            L + G+   A +L DEM    + P   TYN LIDG  +      A+ +  ++E      
Sbjct: 483 ALCKKGETRKAVRLLDEMFEVGLNPSHLTYNALIDGYFREGNSTAALNVRTLMEKKGRRA 542

Query: 437 GIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKG 487
            I  +N LI G C  G+L+ A  L +++ +KGL+P   TY I+   +  KG
Sbjct: 543 NIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYDILRDEMMEKG 593



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 84/280 (30%), Positives = 125/280 (44%), Gaps = 50/280 (17%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
           N  ++  C +G   L+EA      M+ M   P + ++N L     K +           +
Sbjct: 338 NSLINGLCSNG--KLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDI 395

Query: 102 VSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLING 161
              GL P+ +T N LI+ +G          R+ +A  L   M+  GV P+V TY  LI G
Sbjct: 396 GKRGLAPNVITFNTLIDAYGK-------AGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVG 448

Query: 162 FCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKG 221
           FCR GN+  A +L K+M      NGL  K ++ +Y+I++D+LCK+G   KA  L  EM  
Sbjct: 449 FCREGNVKEARKLAKEMEG----NGL--KADLVTYNILVDALCKKGETRKAVRLLDEMFE 502

Query: 222 RGINPA-----------------------------------VVVCTTLIHGFCCAGNWEE 246
            G+NP+                                   +V    LI GFC  G  EE
Sbjct: 503 VGLNPSHLTYNALIDGYFREGNSTAALNVRTLMEKKGRRANIVTYNVLIKGFCNKGKLEE 562

Query: 247 VNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLL 286
            N L  EML+ G  PN  T++++ D + + G I + +G L
Sbjct: 563 ANRLLNEMLEKGLIPNRTTYDILRDEMMEKGFIPDIDGHL 602



 Score = 75.5 bits (184), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 48/180 (26%), Positives = 92/180 (51%), Gaps = 2/180 (1%)

Query: 407 NILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQ 466
           ++L+    KN  +  A++ F       F       N ++  L K GR+     ++ ++ +
Sbjct: 163 DMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESVYKEMIR 222

Query: 467 KGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSK 526
           + +   VVT+ ++I+GLC+ GK +KA D +  M+  G +P+V+T+NT++ G+ +  K  K
Sbjct: 223 RRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFK 282

Query: 527 VVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKSSYRACLYVTIFQPSSL 586
              LL +M    + + P++ TF+I++D   +DE       V +   R  L   +   +SL
Sbjct: 283 ADALLKEMVA--KRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSL 340


>gi|449463537|ref|XP_004149490.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Cucumis sativus]
          Length = 786

 Score =  238 bits (607), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 147/505 (29%), Positives = 259/505 (51%), Gaps = 17/505 (3%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
           N  LH   KSG  N    R FF  M     +P + ++N++   + K    +     + ++
Sbjct: 258 NFLLHRLSKSG--NGQLVRKFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQM 315

Query: 102 VSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLING 161
             +GL PD +T N LI+ +G           ++E   LF  M   G  PD+ITY  LIN 
Sbjct: 316 REMGLSPDVVTYNSLIDGYGKV-------GSLEEVASLFNEMKDVGCVPDIITYNGLINC 368

Query: 162 FCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKG 221
           +C+   +  A     +M +    NGL  K N+ +YS +ID+ CKEG++  A +LF++M+ 
Sbjct: 369 YCKFEKMPRAFEYFSEMKN----NGL--KPNVVTYSTLIDAFCKEGMMQGAIKLFVDMRR 422

Query: 222 RGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINE 281
            G+ P     T+LI   C AGN  E   L  +ML  G + N++T+  ++D LCK G++ E
Sbjct: 423 TGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIE 482

Query: 282 ANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILIN 341
           A  +   M++ G++P++  Y +L+ GY    R++ A +I   M     K  ++ Y  +I 
Sbjct: 483 AEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIW 542

Query: 342 GYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEP 401
           G+C    +EE   +  ++ S G+    +   T++   F+AG++  A   F EM+   VE 
Sbjct: 543 GHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEA 602

Query: 402 DLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELF 461
            + TY +LIDGLCK   V+ AV  F  +     +  + ++  LIDGLCK   +++A +LF
Sbjct: 603 TIVTYCVLIDGLCKAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCKNNCIESAKKLF 662

Query: 462 HKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQN 521
            ++  +G+ P +  ++ +I G  + G L++A   +  M +     ++  + +L+ GF Q 
Sbjct: 663 DEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVSGFSQC 722

Query: 522 NKTSKVVELLHKMAEPERNLVPDDT 546
            +  +  +  ++M   E+ ++P++ 
Sbjct: 723 GELHQARKFFNEMI--EKGILPEEV 745



 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 138/490 (28%), Positives = 227/490 (46%), Gaps = 71/490 (14%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CK G  +L  +R  F  M  M  SP + ++N L     K    + V S + ++  +G +P
Sbjct: 300 CKEG--DLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVP 357

Query: 109 DFLTLNILINCFGNKER----------------------------GLCVENRIKEATWLF 140
           D +T N LINC+   E+                              C E  ++ A  LF
Sbjct: 358 DIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLF 417

Query: 141 KNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIII 200
            +M   G+ P+  TY +LI+  C+ GNL+ A +L   M+          K NI +Y+ ++
Sbjct: 418 VDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGV------KLNIVTYTALL 471

Query: 201 DSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPR 260
           D LCK G + +A+E+F  M   GI+P   V T L+HG+  A   E+   +  +M +   +
Sbjct: 472 DGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIK 531

Query: 261 PNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREI 320
           P+L+ +  +I   C   K+ E   +LE M  RG++ +     +++D Y   G+   A   
Sbjct: 532 PDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNF 591

Query: 321 FLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQ 380
           F  M   G + T+V+Y +LI+G CK   VE A+  + +++S G++  V  Y +L+ GL +
Sbjct: 592 FQEMQDVGVEATIVTYCVLIDGLCKAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCK 651

Query: 381 AGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEI 440
                 A+KLFDEM+   + PD++ +  LIDG  K+  +QEA+ L   +     EF + +
Sbjct: 652 NNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHV 711

Query: 441 FNCLIDG---------------------------LC--------KAGRLDNAWELFHKLP 465
           +  L+ G                           LC        K G+LD A EL +++ 
Sbjct: 712 YTSLVSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLREYYKRGQLDEAIELKNEME 771

Query: 466 QKGLVPTVVT 475
           + GL+    T
Sbjct: 772 RMGLITESAT 781



 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 112/365 (30%), Positives = 187/365 (51%), Gaps = 2/365 (0%)

Query: 196 YSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEML 255
           + ++     + GL+++A E F  M+     P    C  L+H    +GN + V   F +M+
Sbjct: 222 FDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDMI 281

Query: 256 DLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRID 315
             G  P++ T+NVMID LCK G +  +  L   M + GL+PD  TYNSL+DGY  VG ++
Sbjct: 282 GAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLE 341

Query: 316 TAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLL 375
               +F  M   GC   +++YN LIN YCK   +  A   + ++ +NG++  V+TY+TL+
Sbjct: 342 EVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLI 401

Query: 376 SGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFE 435
               + G    A KLF +M+   + P+  TY  LID  CK   + EA KL + +     +
Sbjct: 402 DAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVK 461

Query: 436 FGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDF 495
             I  +  L+DGLCKAGR+  A E+F  + + G+ P    Y+ ++HG  +  ++E A   
Sbjct: 462 LNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKI 521

Query: 496 LLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLL 555
           L  M +    P+++ + +++ G     K  +   +L +M    R +  +    + ++D  
Sbjct: 522 LKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEM--KSRGISANPVISTTIIDAY 579

Query: 556 AKDEK 560
            K  K
Sbjct: 580 FKAGK 584



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 101/315 (32%), Positives = 162/315 (51%), Gaps = 2/315 (0%)

Query: 230 VCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELM 289
           V   L   F   G  EE N  F  M +    P   + N ++  L K G           M
Sbjct: 221 VFDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDM 280

Query: 290 IQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNV 349
           I  G+ P  FTYN ++D  C  G ++ +R +F+ M   G    VV+YN LI+GY K+ ++
Sbjct: 281 IGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSL 340

Query: 350 EEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNIL 409
           EE  SL+ ++   G    +ITYN L++   +  +   A + F EMK   ++P++ TY+ L
Sbjct: 341 EEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTL 400

Query: 410 IDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGL 469
           ID  CK   +Q A+KLF  +           +  LID  CKAG L  AW+L + + Q G+
Sbjct: 401 IDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGV 460

Query: 470 VPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVE 529
              +VTY+ ++ GLC+ G++ +A +    M K+G +PN   +  L+HG+++  +    ++
Sbjct: 461 KLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMK 520

Query: 530 LLHKMAEPERNLVPD 544
           +L +M E   N+ PD
Sbjct: 521 ILKQMTEC--NIKPD 533



 Score = 41.6 bits (96), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 30/131 (22%), Positives = 56/131 (42%), Gaps = 2/131 (1%)

Query: 437 GIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFL 496
           G  +F+ L     + G L+ A E F ++     +P   + + ++H L + G  +    F 
Sbjct: 218 GSGVFDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFF 277

Query: 497 LYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLA 556
             M   G AP+V T+N ++    +         L  +M   E  L PD  T++ ++D   
Sbjct: 278 NDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMR--EMGLSPDVVTYNSLIDGYG 335

Query: 557 KDEKYHECSAV 567
           K     E +++
Sbjct: 336 KVGSLEEVASL 346


>gi|225451367|ref|XP_002263590.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680 [Vitis vinifera]
 gi|296087085|emb|CBI33459.3| unnamed protein product [Vitis vinifera]
          Length = 592

 Score =  238 bits (606), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 147/412 (35%), Positives = 228/412 (55%), Gaps = 20/412 (4%)

Query: 74  PISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRI 133
           P  S   LF  + K        +FY +++  G  PD    N+L++        LC E++I
Sbjct: 189 PFHSCGYLFDRLMKLNLTSPAWAFYEEILDCGYPPDVCKFNVLMH-------RLCKEHKI 241

Query: 134 KEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNI 193
            EA  LF  +   G+RP V+++ TLING+C++GNL    RL + M+    EN +    ++
Sbjct: 242 NEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMM----ENRVFP--DV 295

Query: 194 FSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIE 253
           F+YS++I+ LCKEG +D A +LFLEM  RG+ P  V  TTLI+G C  G  +    ++ +
Sbjct: 296 FTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQ 355

Query: 254 MLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGR 313
           ML  G +P+++T+N +I+ LCK G + EA  L+  M QRGL PD+FTY  L+DG C  G 
Sbjct: 356 MLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGD 415

Query: 314 IDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNT 373
           +++A EI   M  +G +   V++  LI+G+C+   V EA    R+++  G++    TY  
Sbjct: 416 LESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTM 475

Query: 374 LLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFH-MLEMN 432
           ++ G  + G      KL  EM+     P + TYN+L++GLCK   ++ A  L   ML + 
Sbjct: 476 VIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDAMLNLG 535

Query: 433 KFEFGIEIFNCLIDGLCKAGRLDNAWELFHKL-PQKGLVPTVVTYSIMIHGL 483
                I  +N L++G CK G  ++    F KL  +KGLV    +Y+ +I  L
Sbjct: 536 VVPDDI-TYNILLEGHCKHGNRED----FDKLQSEKGLVQDYGSYTSLIGDL 582



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 129/423 (30%), Positives = 216/423 (51%), Gaps = 17/423 (4%)

Query: 136 ATWLFKNMI-AFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNI- 193
           A+ +F +++ A G     + +  L+N +  +G  S A++  +          L+ K N+ 
Sbjct: 138 ASSVFTSVLEARGTHQSNLVFSVLMNAYTDSGYFSDAIQCFR----------LVRKHNLQ 187

Query: 194 ---FSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGL 250
               S   + D L K  L   A   + E+   G  P V     L+H  C      E   L
Sbjct: 188 IPFHSCGYLFDRLMKLNLTSPAWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLL 247

Query: 251 FIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCL 310
           F E+   G RP +++FN +I+  CK G +++   L   M++  + PD FTY+ L++G C 
Sbjct: 248 FGEIGKRGLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCK 307

Query: 311 VGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVIT 370
            G++D A ++FL M  +G     V++  LING+C     +  M +Y+Q++  GV+  VIT
Sbjct: 308 EGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVIT 367

Query: 371 YNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLE 430
           YNTL++GL + G    A+KL  EM    ++PD  TY +LIDG CK   ++ A+++   + 
Sbjct: 368 YNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMV 427

Query: 431 MNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLE 490
               E     F  LI G C+ G++  A     ++ + G+ P   TY+++IHG C+KG ++
Sbjct: 428 KEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVK 487

Query: 491 KANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSI 550
                L  M+ +G  P VVT+N L++G  +  +      LL  M      +VPDD T++I
Sbjct: 488 TGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDAML--NLGVVPDDITYNI 545

Query: 551 VVD 553
           +++
Sbjct: 546 LLE 548



 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 118/370 (31%), Positives = 206/370 (55%), Gaps = 13/370 (3%)

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
           ++  +++++  LCKE  +++A+ LF E+  RG+ P VV   TLI+G+C +GN ++   L 
Sbjct: 224 DVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQGFRLK 283

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
             M++    P++ T++V+I+ LCK G++++AN L   M  RGL P+  T+ +L++G+C+ 
Sbjct: 284 RFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVT 343

Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
           GR D   EI+  M  KG K  V++YN LING CK+ ++ EA  L  ++   G++    TY
Sbjct: 344 GRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTY 403

Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
             L+ G  + G    A ++  EM    +E D   +  LI G C+   V EA +    +  
Sbjct: 404 TMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREM-- 461

Query: 432 NKFEFGIE----IFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKG 487
              E GI+     +  +I G CK G +   ++L  ++   G VP VVTY+++++GLC++G
Sbjct: 462 --LEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQG 519

Query: 488 KLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTT 547
           +++ AN  L  M   G  P+ +T+N L+ G  ++       +L     + E+ LV D  +
Sbjct: 520 QMKNANMLLDAMLNLGVVPDDITYNILLEGHCKHGNREDFDKL-----QSEKGLVQDYGS 574

Query: 548 FSIVVDLLAK 557
           ++ ++  L K
Sbjct: 575 YTSLIGDLRK 584



 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 110/353 (31%), Positives = 177/353 (50%), Gaps = 13/353 (3%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
           P +  FN+L   + K    +     + ++   GL P  ++ N LIN       G C    
Sbjct: 223 PDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLIN-------GYCKSGN 275

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
           + +   L + M+   V PDV TY  LING C+ G L  A +L  +M     + GL+   N
Sbjct: 276 LDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMC----DRGLVP--N 329

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
             +++ +I+  C  G  D   E++ +M  +G+ P V+   TLI+G C  G+  E   L I
Sbjct: 330 DVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVI 389

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
           EM   G +P+  T+ ++ID  CK G +  A  + + M++ G+  D   + +L+ G+C  G
Sbjct: 390 EMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREG 449

Query: 313 RIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYN 372
           ++  A      M   G K    +Y ++I+G+CK  +V+    L +++  +G    V+TYN
Sbjct: 450 QVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYN 509

Query: 373 TLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKL 425
            LL+GL + GQ   A  L D M    V PD  TYNIL++G CK+   ++  KL
Sbjct: 510 VLLNGLCKQGQMKNANMLLDAMLNLGVVPDDITYNILLEGHCKHGNREDFDKL 562



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 120/376 (31%), Positives = 186/376 (49%), Gaps = 18/376 (4%)

Query: 40  QLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYR 99
           + N  +H  CK   IN  EA+  FG +      P + SFN L     K+ + D      R
Sbjct: 227 KFNVLMHRLCKEHKIN--EAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQGFRLKR 284

Query: 100 KLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLI 159
            ++   + PD  T ++LIN       GLC E ++ +A  LF  M   G+ P+ +T+ TLI
Sbjct: 285 FMMENRVFPDVFTYSVLIN-------GLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLI 337

Query: 160 NGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEM 219
           NG C TG   + + ++++M+      G+  K ++ +Y+ +I+ LCK G + +AK+L +EM
Sbjct: 338 NGHCVTGRADLGMEIYQQML----RKGV--KPDVITYNTLINGLCKVGDLREAKKLVIEM 391

Query: 220 KGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKI 279
             RG+ P     T LI G C  G+ E    +  EM+  G   + + F  +I   C+ G++
Sbjct: 392 TQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQV 451

Query: 280 NEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNIL 339
            EA   L  M++ G+ PD  TY  ++ G+C  G + T  ++   M   G    VV+YN+L
Sbjct: 452 IEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVL 511

Query: 340 INGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNV 399
           +NG CK   ++ A  L   +++ GV    ITYN LL G  + G      KL  E  L   
Sbjct: 512 LNGLCKQGQMKNANMLLDAMLNLGVVPDDITYNILLEGHCKHGNREDFDKLQSEKGLVQ- 570

Query: 400 EPDLSTYNILIDGLCK 415
             D  +Y  LI  L K
Sbjct: 571 --DYGSYTSLIGDLRK 584



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 81/316 (25%), Positives = 153/316 (48%), Gaps = 19/316 (6%)

Query: 260 RPNLLTFNVMIDCLCKGGKINEANGLLELMIQR-----------------GLNPDRFTYN 302
           R ++ ++  M   LC    ++EA  LL+ ++ R                 G +     ++
Sbjct: 100 RLSIHSYCTMTHFLCTHKMLSEAQSLLQFVVSRKGKNSASSVFTSVLEARGTHQSNLVFS 159

Query: 303 SLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISN 362
            LM+ Y   G    A + F  +     +    S   L +   K+     A + Y +I+  
Sbjct: 160 VLMNAYTDSGYFSDAIQCFRLVRKHNLQIPFHSCGYLFDRLMKLNLTSPAWAFYEEILDC 219

Query: 363 GVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEA 422
           G    V  +N L+  L +  +   AQ LF E+    + P + ++N LI+G CK+  + + 
Sbjct: 220 GYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQG 279

Query: 423 VKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHG 482
            +L   +  N+    +  ++ LI+GLCK G+LD+A +LF ++  +GLVP  VT++ +I+G
Sbjct: 280 FRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLING 339

Query: 483 LCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLV 542
            C  G+ +   +    M + G  P+V+T+NTL++G  +     +  +L+ +M   +R L 
Sbjct: 340 HCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMT--QRGLK 397

Query: 543 PDDTTFSIVVDLLAKD 558
           PD  T+++++D   K+
Sbjct: 398 PDKFTYTMLIDGCCKE 413


>gi|242058841|ref|XP_002458566.1| hypothetical protein SORBIDRAFT_03g035845 [Sorghum bicolor]
 gi|241930541|gb|EES03686.1| hypothetical protein SORBIDRAFT_03g035845 [Sorghum bicolor]
          Length = 796

 Score =  238 bits (606), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 147/548 (26%), Positives = 257/548 (46%), Gaps = 53/548 (9%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
           N  +   CKSG   + EA    G M   +  P I +F +L   +A+ + +  V +  +++
Sbjct: 250 NVLMDALCKSG--RVEEAFRLKGRMVEGRVRPSIVTFGILISGLARGQQFGEVGAVLQEM 307

Query: 102 VSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLING 161
              G+ P+ +  N +I          C +    EA  LF  M++ G++  V+TY  +   
Sbjct: 308 QGFGITPNEVIYNEMIGWH-------CRKGHCSEALKLFDEMVSKGIKQTVVTYNLIAKA 360

Query: 162 FCR------------------------------------TGNLSVALRLHKKMVSGDYEN 185
            C+                                    TG L + LRL ++M++     
Sbjct: 361 LCKEGEMEHAEKILDEMLLAGMMVHCSLFNSVVAWHLRGTGRLDLVLRLIREMLA----- 415

Query: 186 GLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWE 245
               K N    +  I  LCK G  ++A E++ ++ G+G+   V     LIHG C   N +
Sbjct: 416 -RFLKPNDALMTACIQELCKSGKHEEAAEIWFQVLGKGLGVNVATSNALIHGLCQGNNMK 474

Query: 246 EVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLM 305
           E   +   M++ G   + +T+N+MI   CK  K++EA  L + MI+RG  PD FT+N  +
Sbjct: 475 EATKVLKAMVNSGVELDRITYNIMIQGCCKASKMDEAIQLRDDMIKRGFKPDLFTFNIFL 534

Query: 306 DGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVR 365
             YC +G+++    +   M S+G K  +V+Y  +I+GYCK  ++ +A     +++ NG+R
Sbjct: 535 HTYCNLGKVEEILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDMHKANEYLTELMKNGLR 594

Query: 366 QTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKL 425
              + YN L+ G  + G    A  + D MK   ++P   TYN L+  +C    V+E   +
Sbjct: 595 PNAVIYNALIGGYGRNGNISDAIGILDTMKYNGIQPTPVTYNSLMYWMCHAGLVEEVKAV 654

Query: 426 FHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCR 485
           F    +   E G+  +  +I G CK G++D A   F ++  +G+ P  +TY+ ++    +
Sbjct: 655 FAQCIVKDIELGVIGYTIIIQGFCKIGKIDEAVMYFKEMHSRGIPPNKMTYTTLMFAYSK 714

Query: 486 KGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDD 545
            G  E+A+     M   G  P+ V++NTL+ GF + +   K+VE   +M+   + L  D 
Sbjct: 715 SGNKEEASKLFDEMVSLGIVPDSVSYNTLISGFCEVDSLDKMVESPAEMS--SQVLKQDG 772

Query: 546 TTFSIVVD 553
            +++  VD
Sbjct: 773 CSYNAFVD 780



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 133/481 (27%), Positives = 227/481 (47%), Gaps = 13/481 (2%)

Query: 55  NLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLN 114
           +L+ A   F  ++    SP I + ++L  A+      D      RK+   G + D  T+ 
Sbjct: 155 SLSRAADAFLELSARGASPSIKTCSILVEALGCGGQLDVA----RKV--FGEMRDGKTVA 208

Query: 115 ILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRL 174
             ++ +    + LC    I  A  +   +   G++P V+TY  L++  C++G +  A RL
Sbjct: 209 PDVHTYTAMIKALCRAGEIDAAFAMLAELRRSGIQPTVVTYNVLMDALCKSGRVEEAFRL 268

Query: 175 HKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTL 234
             +MV G        + +I ++ I+I  L +     +   +  EM+G GI P  V+   +
Sbjct: 269 KGRMVEGRV------RPSIVTFGILISGLARGQQFGEVGAVLQEMQGFGITPNEVIYNEM 322

Query: 235 IHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGL 294
           I   C  G+  E   LF EM+  G +  ++T+N++   LCK G++  A  +L+ M+  G+
Sbjct: 323 IGWHCRKGHCSEALKLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEKILDEMLLAGM 382

Query: 295 NPDRFTYNSLMDGYCL-VGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAM 353
                 +NS++  +    GR+D    +   M ++  K         I   CK    EEA 
Sbjct: 383 MVHCSLFNSVVAWHLRGTGRLDLVLRLIREMLARFLKPNDALMTACIQELCKSGKHEEAA 442

Query: 354 SLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGL 413
            ++ Q++  G+   V T N L+ GL Q      A K+   M    VE D  TYNI+I G 
Sbjct: 443 EIWFQVLGKGLGVNVATSNALIHGLCQGNNMKEATKVLKAMVNSGVELDRITYNIMIQGC 502

Query: 414 CKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTV 473
           CK + + EA++L   +    F+  +  FN  +   C  G+++    L  ++  +GL P +
Sbjct: 503 CKASKMDEAIQLRDDMIKRGFKPDLFTFNIFLHTYCNLGKVEEILHLLDQMKSEGLKPDI 562

Query: 474 VTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHK 533
           VTY  +I G C+   + KAN++L  + KNG  PN V +N L+ G+ +N   S  + +L  
Sbjct: 563 VTYGTIIDGYCKAKDMHKANEYLTELMKNGLRPNAVIYNALIGGYGRNGNISDAIGILDT 622

Query: 534 M 534
           M
Sbjct: 623 M 623



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 116/432 (26%), Positives = 206/432 (47%), Gaps = 8/432 (1%)

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
           +  A   F  + A G  P + T   L+      G L VA     + V G+  +G     +
Sbjct: 156 LSRAADAFLELSARGASPSIKTCSILVEALGCGGQLDVA-----RKVFGEMRDGKTVAPD 210

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
           + +Y+ +I +LC+ G +D A  +  E++  GI P VV    L+   C +G  EE   L  
Sbjct: 211 VHTYTAMIKALCRAGEIDAAFAMLAELRRSGIQPTVVTYNVLMDALCKSGRVEEAFRLKG 270

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
            M++   RP+++TF ++I  L +G +  E   +L+ M   G+ P+   YN ++  +C  G
Sbjct: 271 RMVEGRVRPSIVTFGILISGLARGQQFGEVGAVLQEMQGFGITPNEVIYNEMIGWHCRKG 330

Query: 313 RIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYN 372
               A ++F  M SKG K TVV+YN++    CK   +E A  +  +++  G+      +N
Sbjct: 331 HCSEALKLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEKILDEMLLAGMMVHCSLFN 390

Query: 373 TLLSG-LFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
           ++++  L   G+     +L  EM    ++P+ +     I  LCK+   +EA +++  +  
Sbjct: 391 SVVAWHLRGTGRLDLVLRLIREMLARFLKPNDALMTACIQELCKSGKHEEAAEIWFQVLG 450

Query: 432 NKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEK 491
                 +   N LI GLC+   +  A ++   +   G+    +TY+IMI G C+  K+++
Sbjct: 451 KGLGVNVATSNALIHGLCQGNNMKEATKVLKAMVNSGVELDRITYNIMIQGCCKASKMDE 510

Query: 492 ANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIV 551
           A      M K G  P++ TFN  +H +    K  +++ LL +M      L PD  T+  +
Sbjct: 511 AIQLRDDMIKRGFKPDLFTFNIFLHTYCNLGKVEEILHLLDQM--KSEGLKPDIVTYGTI 568

Query: 552 VDLLAKDEKYHE 563
           +D   K +  H+
Sbjct: 569 IDGYCKAKDMHK 580



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 107/372 (28%), Positives = 176/372 (47%), Gaps = 48/372 (12%)

Query: 87  KNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAF 146
           K+  ++     + +++  GL  +  T N LI+       GLC  N +KEAT + K M+  
Sbjct: 434 KSGKHEEAAEIWFQVLGKGLGVNVATSNALIH-------GLCQGNNMKEATKVLKAMVNS 486

Query: 147 GVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKE 206
           GV  D ITY  +I G C+   +  A++L   M+   +      K ++F+++I + + C  
Sbjct: 487 GVELDRITYNIMIQGCCKASKMDEAIQLRDDMIKRGF------KPDLFTFNIFLHTYCNL 540

Query: 207 GLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTF 266
           G V++   L  +MK  G+ P +V   T+I G+C A +  + N    E++  G RPN + +
Sbjct: 541 GKVEEILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDMHKANEYLTELMKNGLRPNAVIY 600

Query: 267 NVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLM--------------------- 305
           N +I    + G I++A G+L+ M   G+ P   TYNSLM                     
Sbjct: 601 NALIGGYGRNGNISDAIGILDTMKYNGIQPTPVTYNSLMYWMCHAGLVEEVKAVFAQCIV 660

Query: 306 --------------DGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEE 351
                          G+C +G+ID A   F  MHS+G     ++Y  L+  Y K  N EE
Sbjct: 661 KDIELGVIGYTIIIQGFCKIGKIDEAVMYFKEMHSRGIPPNKMTYTTLMFAYSKSGNKEE 720

Query: 352 AMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILID 411
           A  L+ +++S G+    ++YNTL+SG  +        +   EM    ++ D  +YN  +D
Sbjct: 721 ASKLFDEMVSLGIVPDSVSYNTLISGFCEVDSLDKMVESPAEMSSQVLKQDGCSYNAFVD 780

Query: 412 GLCKNNCVQEAV 423
           G+    C +EAV
Sbjct: 781 GITTPWCQKEAV 792



 Score =  128 bits (322), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 89/342 (26%), Positives = 152/342 (44%), Gaps = 38/342 (11%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
           N  +H  C+    N+ EA      M +        ++N++     K    D  I     +
Sbjct: 461 NALIHGLCQGN--NMKEATKVLKAMVNSGVELDRITYNIMIQGCCKASKMDEAIQLRDDM 518

Query: 102 VSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLING 161
           +  G  PD  T NI ++ +       C   +++E   L   M + G++PD++TYGT+I+G
Sbjct: 519 IKRGFKPDLFTFNIFLHTY-------CNLGKVEEILHLLDQMKSEGLKPDIVTYGTIIDG 571

Query: 162 FCRTGNLSVA-----------LR----LHKKMVSGDYENGLIS--------------KTN 192
           +C+  ++  A           LR    ++  ++ G   NG IS              +  
Sbjct: 572 YCKAKDMHKANEYLTELMKNGLRPNAVIYNALIGGYGRNGNISDAIGILDTMKYNGIQPT 631

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
             +Y+ ++  +C  GLV++ K +F +   + I   V+  T +I GFC  G  +E    F 
Sbjct: 632 PVTYNSLMYWMCHAGLVEEVKAVFAQCIVKDIELGVIGYTIIIQGFCKIGKIDEAVMYFK 691

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
           EM   G  PN +T+  ++    K G   EA+ L + M+  G+ PD  +YN+L+ G+C V 
Sbjct: 692 EMHSRGIPPNKMTYTTLMFAYSKSGNKEEASKLFDEMVSLGIVPDSVSYNTLISGFCEVD 751

Query: 313 RIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMS 354
            +D   E    M S+  K    SYN  ++G       +EA+S
Sbjct: 752 SLDKMVESPAEMSSQVLKQDGCSYNAFVDGITTPWCQKEAVS 793


>gi|356510082|ref|XP_003523769.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 602

 Score =  238 bits (606), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 153/543 (28%), Positives = 268/543 (49%), Gaps = 49/543 (9%)

Query: 2   ASRTQFRCLFSSETVSKVKLSSLFKSPRQIAAVSSPETQLNEFLHENCKSGIINLNEARY 61
           A+R++ R       VSK + S L    +QI  VS+P   LN    E   S  I +N +R 
Sbjct: 49  ATRSRKRLENRVSAVSKSEASGLNGRLQQI--VSTPNGDLNVIGME---SSPIGVNGSRS 103

Query: 62  FFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFG 121
           F  + +           N+    + +N   +  + F  +++  G +PD +    LI    
Sbjct: 104 FEEFAS-----------NIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLI---- 148

Query: 122 NKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKM-VS 180
              RG C   + K+AT + + +   G  PDVITY  LI G+C++G +  AL + ++M V+
Sbjct: 149 ---RGFCRSGKTKKATRIMEILENSGAVPDVITYNVLIGGYCKSGEIDKALEVLERMSVA 205

Query: 181 GDY-----------ENGLISKT--------------NIFSYSIIIDSLCKEGLVDKAKEL 215
            D            ++G + +               ++ +Y+I+I++ C +  V +A +L
Sbjct: 206 PDVVTYNTILRSLCDSGKLKEAMEVLDRQLQRECYPDVITYTILIEATCNDSGVGQAMKL 265

Query: 216 FLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCK 275
             EM+ +G  P VV    LI+G C  G  +E       M   G +PN++T N+++  +C 
Sbjct: 266 LDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCS 325

Query: 276 GGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVS 335
            G+  +A  LL  M+++G +P   T+N L++  C    +  A ++   M   GC    +S
Sbjct: 326 TGRWMDAERLLSDMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLS 385

Query: 336 YNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMK 395
           YN L++G+C+   ++ A+     ++S G    ++TYNTLL+ L + G+   A ++ +++ 
Sbjct: 386 YNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQLS 445

Query: 396 LYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLD 455
                P L TYN +IDGL K    + AV+L   +     +  I  ++ L+ GL + G++D
Sbjct: 446 SKGCSPVLITYNTVIDGLTKVGKTEYAVELLEEMRRKGLKPDIITYSTLLRGLGREGKVD 505

Query: 456 NAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLM 515
            A ++FH +    + P+ VTY+ ++ GLC+  +  +A DFL YM + GC P   T+  L+
Sbjct: 506 EAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTEATYTILI 565

Query: 516 HGF 518
            G 
Sbjct: 566 EGI 568


>gi|302772597|ref|XP_002969716.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
 gi|300162227|gb|EFJ28840.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
          Length = 457

 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 135/433 (31%), Positives = 221/433 (51%), Gaps = 8/433 (1%)

Query: 127 LCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENG 186
           L    R       + +M+  G  P+  TYG L+   C+      A  + + M +      
Sbjct: 27  LAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGMAAQG---- 82

Query: 187 LISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEE 246
                N+FSYSI+I  LC+   VD+A EL  EM   G  P VV   +L+ G C  G  +E
Sbjct: 83  --CSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKE 140

Query: 247 VNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMD 306
              LF  M+  G  P+ + +NV+ID   K G + EA  L E M+++G  P  FTYNSL+ 
Sbjct: 141 AVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLS 200

Query: 307 GYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQ 366
           G+   G     + +F  M  +GC   + ++N L++G+CK+ ++ EA  L+ ++ S G   
Sbjct: 201 GFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPP 260

Query: 367 TVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLF 426
            V++YNTL+ G+   G+   AQ+L  EM    V PD+ +YNILIDG  K+  +  A+KLF
Sbjct: 261 DVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLF 320

Query: 427 HMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRK 486
           + +  +  E     ++ +ID LC+AG++  A+ +F  +   G  P       ++ GLCR 
Sbjct: 321 YEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRG 380

Query: 487 GKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDT 546
            +L ++ +    M K  C P +  +N LM+   +  ++  V E+ H++   ER   PD  
Sbjct: 381 ERLTESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELT--ERGFSPDVE 438

Query: 547 TFSIVVDLLAKDE 559
              ++++ L + +
Sbjct: 439 ISKVILETLRRSD 451



 Score =  221 bits (563), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 139/424 (32%), Positives = 221/424 (52%), Gaps = 19/424 (4%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
           P   ++  L  ++ + + ++   S +R + + G  P+  + +ILI        GLC   +
Sbjct: 50  PNTYTYGYLLRSLCQAQRFEEARSVFRGMAAQGCSPNVFSYSILIA-------GLCRGQK 102

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMV-SGDYENGLISKT 191
           + EA  L   MI  G +P+V+TYG+L++G C+ G L  A+ L  +MV  G   +G++   
Sbjct: 103 VDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVV--- 159

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
               Y+++ID   K+G + +A  LF EM  +G  P V    +L+ GF   G +  V  LF
Sbjct: 160 ----YNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLF 215

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
            +ML  G  PN+ TFN ++D  CK G + EA+ L   M   G  PD  +YN+LM G C  
Sbjct: 216 KDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGMCSK 275

Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
           G+   A+ +   M   G    +VSYNILI+GY K   ++ A+ L+ +I  +G+     +Y
Sbjct: 276 GKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSY 335

Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
           +T++  L +AG+ G A  +F +M      PD +    L+ GLC+   + E+ +LF    M
Sbjct: 336 STIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQ--AM 393

Query: 432 NKFEFG--IEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKL 489
            KFE    I  +N L+  LCKA R D+  E+FH+L ++G  P V    +++  L R    
Sbjct: 394 VKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPDVEISKVILETLRRSDDK 453

Query: 490 EKAN 493
           E A 
Sbjct: 454 EAAE 457



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 127/391 (32%), Positives = 194/391 (49%), Gaps = 42/391 (10%)

Query: 194 FSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIE 253
            SY+ +++ L K G  D     + +M G G  P       L+   C A  +EE   +F  
Sbjct: 18  LSYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRG 77

Query: 254 MLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGR 313
           M   G  PN+ +++++I  LC+G K++EA  LL  MI  G  P+  TY SL+ G C +G+
Sbjct: 78  MAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGK 137

Query: 314 IDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNT 373
           +  A ++F  M  +GC    V YN+LI+G+ K  ++ EA  L+ +++  G   TV TYN+
Sbjct: 138 LKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNS 197

Query: 374 LLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLF------- 426
           LLSG  + G+ G  Q LF +M      P++ T+N L+DG CK   + EA +LF       
Sbjct: 198 LLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLG 257

Query: 427 ---------------------H-----MLEMNKFEFGIEI--FNCLIDGLCKAGRLDNAW 458
                                H     + EM +   G +I  +N LIDG  K+G LD+A 
Sbjct: 258 CPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAI 317

Query: 459 ELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGF 518
           +LF+++P+ GL P   +YS +I  LCR GK+  A      M  NG AP+      L+ G 
Sbjct: 318 KLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGL 377

Query: 519 LQNNKTSKVVELLHKMAE-------PERNLV 542
            +  + ++  EL   M +       PE NL+
Sbjct: 378 CRGERLTESCELFQAMVKFECVPLIPEYNLL 408



 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 107/332 (32%), Positives = 166/332 (50%), Gaps = 37/332 (11%)

Query: 264 LTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLS 323
           L++N +++ L K G+ +   G    M+  G  P+ +TY  L+   C   R + AR +F  
Sbjct: 18  LSYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRG 77

Query: 324 MHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQ 383
           M ++GC   V SY+ILI G C+   V+EA  L  ++I  G +  V+TY +LLSGL + G+
Sbjct: 78  MAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGK 137

Query: 384 AGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLF-HMLEM----------- 431
              A  LF  M      PD   YN+LIDG  K   + EA +LF  MLE            
Sbjct: 138 LKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNS 197

Query: 432 ------NKFEFG-----------------IEIFNCLIDGLCKAGRLDNAWELFHKLPQKG 468
                  K EFG                 I  FN L+DG CK G +  A  LF ++   G
Sbjct: 198 LLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLG 257

Query: 469 LVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVV 528
             P VV+Y+ ++ G+C KGK  +A   L  M ++G  P++V++N L+ G+ ++      +
Sbjct: 258 CPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAI 317

Query: 529 ELLHKMAEPERNLVPDDTTFSIVVDLLAKDEK 560
           +L +++  P+  L PD  ++S ++D L +  K
Sbjct: 318 KLFYEI--PKSGLEPDAFSYSTIIDCLCRAGK 347



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 85/282 (30%), Positives = 140/282 (49%), Gaps = 6/282 (2%)

Query: 295 NPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMS 354
           N    +YN L++     GR D     +  M   GC     +Y  L+   C+    EEA S
Sbjct: 14  NHGTLSYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARS 73

Query: 355 LYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLC 414
           ++R + + G    V +Y+ L++GL +  +   A +L +EM     +P++ TY  L+ GLC
Sbjct: 74  VFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLC 133

Query: 415 KNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVV 474
           K   ++EAV LF  +          ++N LIDG  K G +  A+ LF ++ +KG +PTV 
Sbjct: 134 KMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVF 193

Query: 475 TYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKM 534
           TY+ ++ G  RKG+  +       M + GC PN+ TFN L+ GF    K   +VE  H++
Sbjct: 194 TYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFC---KMGDMVE-AHRL 249

Query: 535 AEPERNL--VPDDTTFSIVVDLLAKDEKYHECSAVSKSSYRA 574
               R+L   PD  +++ ++  +    K HE   + +   R+
Sbjct: 250 FLEMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRS 291



 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 66/255 (25%), Positives = 116/255 (45%), Gaps = 18/255 (7%)

Query: 20  KLSSLFKSPRQIAAVSSPETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFN 79
           ++ SLFK   +   V +  T  N  L   CK G  ++ EA   F  M  +   P + S+N
Sbjct: 210 RVQSLFKDMLRQGCVPNIFT-FNNLLDGFCKMG--DMVEAHRLFLEMRSLGCPPDVVSYN 266

Query: 80  -LLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATW 138
            L+ G  +K + ++A     R+++  G+ PD ++ NILI+       G      +  A  
Sbjct: 267 TLMRGMCSKGKPHEAQ-RLLREMIRSGVGPDIVSYNILID-------GYSKSGALDHAIK 318

Query: 139 LFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSI 198
           LF  +   G+ PD  +Y T+I+  CR G +  A  + K M++    NG      +    +
Sbjct: 319 LFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIA----NGSAPDAAVVIPLV 374

Query: 199 IIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLG 258
           I   LC+   + ++ ELF  M      P +     L++  C A   ++V  +F E+ + G
Sbjct: 375 I--GLCRGERLTESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERG 432

Query: 259 PRPNLLTFNVMIDCL 273
             P++    V+++ L
Sbjct: 433 FSPDVEISKVILETL 447



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 40/143 (27%), Positives = 71/143 (49%), Gaps = 3/143 (2%)

Query: 434 FEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKAN 493
           +  G   +N L++ L K+GR D+ +  ++ +   G VP   TY  ++  LC+  + E+A 
Sbjct: 13  YNHGTLSYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEAR 72

Query: 494 DFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
                M   GC+PNV +++ L+ G  +  K  +  ELL++M +      P+  T+  ++ 
Sbjct: 73  SVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQ--PNVVTYGSLLS 130

Query: 554 LLAKDEKYHECSAV-SKSSYRAC 575
            L K  K  E   + S+  YR C
Sbjct: 131 GLCKMGKLKEAVDLFSRMVYRGC 153


>gi|224113511|ref|XP_002316516.1| predicted protein [Populus trichocarpa]
 gi|222865556|gb|EEF02687.1| predicted protein [Populus trichocarpa]
          Length = 761

 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 148/535 (27%), Positives = 262/535 (48%), Gaps = 35/535 (6%)

Query: 56  LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNI 115
           + EA   F  M      P + S+N +   + ++ ++      + ++ ++G++PD  T  I
Sbjct: 92  VQEAVDVFERMDFYNCEPSVLSYNAIMNILVESGYFKQAHKVFLRMKNVGIVPDVYTFTI 151

Query: 116 LINCFGNKER----------------------------GLCVENRIKEATWLFKNMIAFG 147
            I  F   +R                            G   EN   EA  LF +M+  G
Sbjct: 152 RIKSFCRTKRPHSALRLLNNMVSQGCQLNAVAYCTVVAGFYEENYRVEAYELFNDMLRIG 211

Query: 148 VRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEG 207
           + PDV T+  L++  C+ G +  + RL  K++    + G+ S  N+F+++I I  LC++G
Sbjct: 212 IFPDVSTFNKLLHTLCKKGEVQESERLLNKVL----KKGMCS--NLFTFNIFIQGLCRKG 265

Query: 208 LVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFN 267
           ++  A  +   +   G+ P VV   TLI G C   N  E      ++++ G  P+  T+N
Sbjct: 266 MLSGAMSMLDSVIREGLTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGLEPDGFTYN 325

Query: 268 VMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSK 327
            +ID  CK G +  A  +L+  I +G  PD FTY SL++G C    ID A  +F +   K
Sbjct: 326 TLIDGYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEIDRALALFNAALGK 385

Query: 328 GCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYA 387
           G K TV+ YN+LI G C+   + +A+ +  ++  NG    + TYN +++GL + G    A
Sbjct: 386 GLKPTVILYNMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVINGLCKMGCVSDA 445

Query: 388 QKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDG 447
             L ++       PD+ T+N LIDG CK   ++  +++ + +  +     +  +N +++G
Sbjct: 446 NNLMNDAIAKGYVPDVFTFNTLIDGYCKQLKMETTIQILNKMWSHGVTPDVITYNSVLNG 505

Query: 448 LCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPN 507
           L KA + ++  E F  + +KG VP  +TY+I+   LC+ GK+ +A D +  +   G  P+
Sbjct: 506 LSKAVKNEDLMETFETMVEKGCVPNKITYNILTESLCKAGKVNEALDLVDEILNKGITPD 565

Query: 508 VVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYH 562
            V+F T++ GF  N       +L  +M E +  +     T++I+++  A+    H
Sbjct: 566 TVSFATIISGFANNGDLKGAYQLFRRMGE-QYKVSHTTATYNIMINAFAEKLDLH 619



 Score =  228 bits (581), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 152/528 (28%), Positives = 253/528 (47%), Gaps = 19/528 (3%)

Query: 18  KVKLSSLFKSPRQIAAVSSPETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISS 77
           +V+   LF    +I       T  N+ LH  CK G   + E+      +        + +
Sbjct: 197 RVEAYELFNDMLRIGIFPDVST-FNKLLHTLCKKG--EVQESERLLNKVLKKGMCSNLFT 253

Query: 78  FNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEAT 137
           FN+    + +       +S    ++  GL PD +T N LI C      GLC  + + EA 
Sbjct: 254 FNIFIQGLCRKGMLSGAMSMLDSVIREGLTPDVVTYNTLI-C------GLCKNSNVVEAE 306

Query: 138 WLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYS 197
                ++  G+ PD  TY TLI+G+C+ G L  A    +K++ G    G +     F+Y 
Sbjct: 307 KYLHKLVNGGLEPDGFTYNTLIDGYCKMGMLQNA----EKILQGAICKGFVPDE--FTYC 360

Query: 198 IIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDL 257
            +I+ LC+   +D+A  LF    G+G+ P V++   LI G C  G   +   +  EM + 
Sbjct: 361 SLINGLCQNDEIDRALALFNAALGKGLKPTVILYNMLIKGLCQEGLILQALQMMNEMSEN 420

Query: 258 GPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTA 317
           G   ++ T+N++I+ LCK G +++AN L+   I +G  PD FT+N+L+DGYC   +++T 
Sbjct: 421 GCSSDIWTYNLVINGLCKMGCVSDANNLMNDAIAKGYVPDVFTFNTLIDGYCKQLKMETT 480

Query: 318 REIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSG 377
            +I   M S G    V++YN ++NG  K +  E+ M  +  ++  G     ITYN L   
Sbjct: 481 IQILNKMWSHGVTPDVITYNSVLNGLSKAVKNEDLMETFETMVEKGCVPNKITYNILTES 540

Query: 378 LFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFH-MLEMNKFEF 436
           L +AG+   A  L DE+    + PD  ++  +I G   N  ++ A +LF  M E  K   
Sbjct: 541 LCKAGKVNEALDLVDEILNKGITPDTVSFATIISGFANNGDLKGAYQLFRRMGEQYKVSH 600

Query: 437 GIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFL 496
               +N +I+   +   L    +LF ++   G  P   TY +MI G C  G  +    FL
Sbjct: 601 TTATYNIMINAFAEKLDLHMGEKLFLEMGAGGCAPDTYTYRVMIDGFCITGNTDSGYKFL 660

Query: 497 LYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPD 544
           L M + G  P++ TF  +++     ++  + V+++H M      +VP+
Sbjct: 661 LEMIEKGFIPSLTTFGRVINCLCVQHRVHEAVDIIHFMV--HNGIVPE 706



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 160/555 (28%), Positives = 263/555 (47%), Gaps = 25/555 (4%)

Query: 19  VKLSSLFKSPRQIAAVS------SPETQLNEFLHENCKSGIINLN---EARYFFGYMTHM 69
           +++ S  ++ R  +A+       S   QLN   +    +G    N   EA   F  M  +
Sbjct: 151 IRIKSFCRTKRPHSALRLLNNMVSQGCQLNAVAYCTVVAGFYEENYRVEAYELFNDMLRI 210

Query: 70  QPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCV 129
              P +S+FN L   + K            K++  G+  +  T NI I       +GLC 
Sbjct: 211 GIFPDVSTFNKLLHTLCKKGEVQESERLLNKVLKKGMCSNLFTFNIFI-------QGLCR 263

Query: 130 ENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLIS 189
           +  +  A  +  ++I  G+ PDV+TY TLI G C+  N+  A +   K+V+G  E     
Sbjct: 264 KGMLSGAMSMLDSVIREGLTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGLE----- 318

Query: 190 KTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNG 249
             + F+Y+ +ID  CK G++  A+++      +G  P      +LI+G C     +    
Sbjct: 319 -PDGFTYNTLIDGYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEIDRALA 377

Query: 250 LFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYC 309
           LF   L  G +P ++ +N++I  LC+ G I +A  ++  M + G + D +TYN +++G C
Sbjct: 378 LFNAALGKGLKPTVILYNMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVINGLC 437

Query: 310 LVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVI 369
            +G +  A  +     +KG    V ++N LI+GYCK L +E  + +  ++ S+GV   VI
Sbjct: 438 KMGCVSDANNLMNDAIAKGYVPDVFTFNTLIDGYCKQLKMETTIQILNKMWSHGVTPDVI 497

Query: 370 TYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHML 429
           TYN++L+GL +A +     + F+ M      P+  TYNIL + LCK   V EA+ L   +
Sbjct: 498 TYNSVLNGLSKAVKNEDLMETFETMVEKGCVPNKITYNILTESLCKAGKVNEALDLVDEI 557

Query: 430 EMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVP-TVVTYSIMIHGLCRKGK 488
                      F  +I G    G L  A++LF ++ ++  V  T  TY+IMI+    K  
Sbjct: 558 LNKGITPDTVSFATIISGFANNGDLKGAYQLFRRMGEQYKVSHTTATYNIMINAFAEKLD 617

Query: 489 LEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTF 548
           L       L M   GCAP+  T+  ++ GF     T    + L +M E  +  +P  TTF
Sbjct: 618 LHMGEKLFLEMGAGGCAPDTYTYRVMIDGFCITGNTDSGYKFLLEMIE--KGFIPSLTTF 675

Query: 549 SIVVDLLAKDEKYHE 563
             V++ L    + HE
Sbjct: 676 GRVINCLCVQHRVHE 690



 Score =  158 bits (399), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 120/449 (26%), Positives = 209/449 (46%), Gaps = 42/449 (9%)

Query: 147 GVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKE 206
           G +  ++TY  +I      GN  VA+         D +N L+    I +    + S  ++
Sbjct: 35  GFKHSLLTYKCIIQKLGFHGNF-VAMENVLAETRMDIDNSLLEGVYIGA----MKSYGRK 89

Query: 207 GLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTF 266
           G V +A ++F  M      P+V+    +++    +G +++ + +F+ M ++G  P++ TF
Sbjct: 90  GKVQEAVDVFERMDFYNCEPSVLSYNAIMNILVESGYFKQAHKVFLRMKNVGIVPDVYTF 149

Query: 267 NVMIDCLCK-----------------GGKIN------------------EANGLLELMIQ 291
            + I   C+                 G ++N                  EA  L   M++
Sbjct: 150 TIRIKSFCRTKRPHSALRLLNNMVSQGCQLNAVAYCTVVAGFYEENYRVEAYELFNDMLR 209

Query: 292 RGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEE 351
            G+ PD  T+N L+   C  G +  +  +   +  KG    + ++NI I G C+   +  
Sbjct: 210 IGIFPDVSTFNKLLHTLCKKGEVQESERLLNKVLKKGMCSNLFTFNIFIQGLCRKGMLSG 269

Query: 352 AMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILID 411
           AMS+   +I  G+   V+TYNTL+ GL +      A+K   ++    +EPD  TYN LID
Sbjct: 270 AMSMLDSVIREGLTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGLEPDGFTYNTLID 329

Query: 412 GLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVP 471
           G CK   +Q A K+        F      +  LI+GLC+   +D A  LF+    KGL P
Sbjct: 330 GYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEIDRALALFNAALGKGLKP 389

Query: 472 TVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELL 531
           TV+ Y+++I GLC++G + +A   +  M +NGC+ ++ T+N +++G  +    S    L+
Sbjct: 390 TVILYNMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVINGLCKMGCVSDANNLM 449

Query: 532 HKMAEPERNLVPDDTTFSIVVDLLAKDEK 560
           +      +  VPD  TF+ ++D   K  K
Sbjct: 450 NDAI--AKGYVPDVFTFNTLIDGYCKQLK 476



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 87/322 (27%), Positives = 150/322 (46%), Gaps = 16/322 (4%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           C+ G+I   +A      M+    S  I ++NL+   + K        +     ++ G +P
Sbjct: 402 CQEGLIL--QALQMMNEMSENGCSSDIWTYNLVINGLCKMGCVSDANNLMNDAIAKGYVP 459

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           D  T N LI+       G C + +++    +   M + GV PDVITY +++NG  +    
Sbjct: 460 DVFTFNTLID-------GYCKQLKMETTIQILNKMWSHGVTPDVITYNSVLNGLSKAVKN 512

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
              +   + MV    E G +   N  +Y+I+ +SLCK G V++A +L  E+  +GI P  
Sbjct: 513 EDLMETFETMV----EKGCVP--NKITYNILTESLCKAGKVNEALDLVDEILNKGITPDT 566

Query: 229 VVCTTLIHGFCCAGNWEEVNGLFIEMLD-LGPRPNLLTFNVMIDCLCKGGKINEANGLLE 287
           V   T+I GF   G+ +    LF  M +         T+N+MI+   +   ++    L  
Sbjct: 567 VSFATIISGFANNGDLKGAYQLFRRMGEQYKVSHTTATYNIMINAFAEKLDLHMGEKLFL 626

Query: 288 LMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKIL 347
            M   G  PD +TY  ++DG+C+ G  D+  +  L M  KG   ++ ++  +IN  C   
Sbjct: 627 EMGAGGCAPDTYTYRVMIDGFCITGNTDSGYKFLLEMIEKGFIPSLTTFGRVINCLCVQH 686

Query: 348 NVEEAMSLYRQIISNGVRQTVI 369
            V EA+ +   ++ NG+   V+
Sbjct: 687 RVHEAVDIIHFMVHNGIVPEVV 708


>gi|302815701|ref|XP_002989531.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
 gi|300142709|gb|EFJ09407.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
          Length = 436

 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 135/435 (31%), Positives = 226/435 (51%), Gaps = 14/435 (3%)

Query: 106 LLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRT 165
           ++P   T N + + F           R+++   +++ M+  G       YG LI+  C+ 
Sbjct: 6   VIPGAATFNTVADGFAK-------AGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKV 58

Query: 166 GNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGIN 225
           GN   A +L   M    +      K    +YS II+ LCK   V++A+EL  +M  R   
Sbjct: 59  GNFDEAYKLLHTMRLKRF------KRKAIAYSTIINWLCKLNRVEEARELIEKM-ARYAP 111

Query: 226 PAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGL 285
           P  +    ++   C     ++      EM   G +P+   +N ++  LC+  K+ EA  L
Sbjct: 112 PDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLL 171

Query: 286 LELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCK 345
            E M+++ +NP+  TYN+L++G C   RI+TA E+F  M  KG   T VSYN LI+G+CK
Sbjct: 172 FEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCK 231

Query: 346 ILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLST 405
             ++  A  ++ +++ +     V+TY TL+ GL ++G+   A ++ D M    V P+++T
Sbjct: 232 KKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVAT 291

Query: 406 YNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLP 465
           Y+ LIDG CK   V EA KL   +        +  +N L++ LC+A +L++A++LF  + 
Sbjct: 292 YSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMA 351

Query: 466 QKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTS 525
           Q+   PTVVTY+ ++  LC   +L+ A+     M   GC P+ +T++TL  G  +  K  
Sbjct: 352 QRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVH 411

Query: 526 KVVELLHKMAEPERN 540
           +  EL+ KM   +RN
Sbjct: 412 EAQELMEKMKLTKRN 426



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 118/405 (29%), Positives = 189/405 (46%), Gaps = 36/405 (8%)

Query: 195 SYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEM 254
           +++ + D   K G +++ KE++  M   G          LI   C  GN++E   L   M
Sbjct: 12  TFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGNFDEAYKLLHTM 71

Query: 255 LDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQ----------------------- 291
                +   + ++ +I+ LCK  ++ EA  L+E M +                       
Sbjct: 72  RLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKMARYAPPDALTYGPIVERLCKTKRID 131

Query: 292 -----------RGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILI 340
                      RG+ PD F YN ++ G C   +++ AR +F  M  +     VV+YN LI
Sbjct: 132 DALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVVTYNTLI 191

Query: 341 NGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVE 400
           NG CK   +E A  L++++   G   T ++YNTL+ G  +      A+ +FD+M   N  
Sbjct: 192 NGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRSNCV 251

Query: 401 PDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWEL 460
           P++ TY  LIDGL K+  VQ A ++   +        +  ++CLIDG CK  R+D A +L
Sbjct: 252 PNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKL 311

Query: 461 FHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQ 520
             ++  +G+ PTVVTY+I+++ LCR  KLE A      M +  C P VVT+NTL+     
Sbjct: 312 LEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCH 371

Query: 521 NNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECS 565
           + +      L  +M    +   PD  T+  +   L +  K HE  
Sbjct: 372 HKQLDGAHRLYAEMI--AKGCPPDAITYDTLAWGLTRAGKVHEAQ 414



 Score =  191 bits (486), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 127/420 (30%), Positives = 201/420 (47%), Gaps = 35/420 (8%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCF---GNKERG--- 126
           P  ++FN +    AK    + V   Y+ +V  G         ILI+C    GN +     
Sbjct: 8   PGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGNFDEAYKL 67

Query: 127 ----------------------LCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCR 164
                                 LC  NR++EA  L + M  +   PD +TYG ++   C+
Sbjct: 68  LHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKMARYAP-PDALTYGPIVERLCK 126

Query: 165 TGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGI 224
           T  +  AL   ++M +     G+  K + F Y+ ++  LC+E  V++A+ LF +M  + I
Sbjct: 127 TKRIDDALATVEEMAT----RGI--KPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRI 180

Query: 225 NPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANG 284
           NP VV   TLI+G C A   E    LF EM   G  P  +++N +ID  CK   +  A  
Sbjct: 181 NPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKD 240

Query: 285 LLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYC 344
           + + M++    P+  TY +L+DG    G++  A E+   M  KG    V +Y+ LI+G+C
Sbjct: 241 VFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFC 300

Query: 345 KILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLS 404
           K+  V+EA  L  Q+++ G+  TV+TYN LL+ L +A +   A KLF  M      P + 
Sbjct: 301 KVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVV 360

Query: 405 TYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKL 464
           TYN L+  LC +  +  A +L+  +           ++ L  GL +AG++  A EL  K+
Sbjct: 361 TYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEKM 420



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 109/347 (31%), Positives = 179/347 (51%), Gaps = 14/347 (4%)

Query: 55  NLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLN 114
            + EAR     M    P P   ++  +   + K +  D  ++   ++ + G+ PD    N
Sbjct: 95  RVEEARELIEKMARYAP-PDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYN 153

Query: 115 ILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRL 174
            +++       GLC E +++EA  LF+ M+   + P+V+TY TLING C+   +  A  L
Sbjct: 154 FVLS-------GLCQEEKVEEARLLFEKMVKQRINPNVVTYNTLINGLCKAWRIETAYEL 206

Query: 175 HKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTL 234
            K+M    Y    +S      Y+ +ID  CK+  +  AK++F +M      P VV  TTL
Sbjct: 207 FKEMAGKGYVPTEVS------YNTLIDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTL 260

Query: 235 IHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGL 294
           I G   +G  +    +   M+  G  PN+ T++ +ID  CK  +++EA+ LLE M+ +G+
Sbjct: 261 IDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGI 320

Query: 295 NPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMS 354
            P   TYN L++  C   +++ A ++F  M  + C  TVV+YN L+   C    ++ A  
Sbjct: 321 APTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHR 380

Query: 355 LYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEP 401
           LY ++I+ G     ITY+TL  GL +AG+   AQ+L ++MKL    P
Sbjct: 381 LYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEKMKLTKRNP 427



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 101/345 (29%), Positives = 181/345 (52%), Gaps = 3/345 (0%)

Query: 219 MKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGK 278
           M  R + P      T+  GF  AG  E+V  ++  M++ G       + ++I CLCK G 
Sbjct: 1   MALRRVIPGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGN 60

Query: 279 INEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNI 338
            +EA  LL  M  +        Y+++++  C + R++ ARE+   M ++      ++Y  
Sbjct: 61  FDEAYKLLHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKM-ARYAPPDALTYGP 119

Query: 339 LINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYN 398
           ++   CK   +++A++   ++ + G++     YN +LSGL Q  +   A+ LF++M    
Sbjct: 120 IVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQR 179

Query: 399 VEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAW 458
           + P++ TYN LI+GLCK   ++ A +LF  +    +      +N LIDG CK   L  A 
Sbjct: 180 INPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAK 239

Query: 459 ELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGF 518
           ++F K+ +   VP VVTY+ +I GL + GK++ A + L  M K G  PNV T++ L+ GF
Sbjct: 240 DVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGF 299

Query: 519 LQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
            +  +  +  +LL +M    + + P   T++I+++ L + +K  +
Sbjct: 300 CKVRRVDEAHKLLEQMV--TQGIAPTVVTYNILLNSLCRADKLED 342


>gi|225453062|ref|XP_002266822.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic-like [Vitis vinifera]
          Length = 582

 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 151/524 (28%), Positives = 255/524 (48%), Gaps = 54/524 (10%)

Query: 11  FSSETVSKVKLSSLFKSPRQIAAVSSPETQLNEFLHENCKSGIINLNEARYFF------G 64
           F+S    KV +S+  + P  + +    ET L + L+ +CK+G    NE+ YF       G
Sbjct: 42  FNSRNAPKVGVSAEAR-PAHLQSYDFRETHLMKLLNRSCKAG--KFNESLYFLECLVNKG 98

Query: 65  YMTHM----------------------------QPSPPISSFNLLFGAVAKNRHYDAVIS 96
           Y   +                               P + ++N +     K    +A   
Sbjct: 99  YTPDVILCTKLIKGFFNFKNIEKASRVMEILESHTEPDVFAYNAVISGFCKVNRIEAATQ 158

Query: 97  FYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYG 156
              ++ + G LPD +T NI+I         LC   ++  A  +   ++     P VITY 
Sbjct: 159 VLNRMKARGFLPDIVTYNIMIG-------SLCNRRKLGLALKVLDQLLLDNCMPTVITYT 211

Query: 157 TLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELF 216
            LI      G ++ A++L ++M++     GL+   ++++Y+ II  +CKEG+V++A EL 
Sbjct: 212 ILIEATIVEGGINEAMKLLEEMLA----RGLLP--DMYTYNAIIRGMCKEGMVERAAELI 265

Query: 217 LEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKG 276
             +  +G  P V+    L+  F   G W+E   L  EM   G  PN +T++++I  LC+ 
Sbjct: 266 TSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRF 325

Query: 277 GKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSY 336
           G+I+EA  +L++MI++ L PD ++Y+ L+   C  GR+D A  I   M S GC   +V+Y
Sbjct: 326 GRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNY 385

Query: 337 NILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKL 396
           N ++   CK  N  +A+ ++ ++   G    V +YNT++S L+  G    A  +   M  
Sbjct: 386 NTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMIS 445

Query: 397 YNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDN 456
             V+PD  TYN LI  LC++  V+EA+ L   +E + F   +  +N ++ GLCK  R+D+
Sbjct: 446 KGVDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDD 505

Query: 457 AWELFHKLPQKGLVPTVVTYSIMIHGL----CRKGKLEKANDFL 496
           A  +F ++ +KG  P   TY ++I G+     R   +E AN   
Sbjct: 506 AIGMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEAMELANSLF 549



 Score =  112 bits (281), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 86/321 (26%), Positives = 146/321 (45%), Gaps = 50/321 (15%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
           N  +   CK G++    A      +T     P + S+N+L  A      +D       ++
Sbjct: 246 NAIIRGMCKEGMVE--RAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEM 303

Query: 102 VSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLING 161
            S G  P+ +T +ILI+        LC   RI EA  + K MI   + PD  +Y  LI+ 
Sbjct: 304 FSRGCEPNKVTYSILIS-------SLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISA 356

Query: 162 FCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKG 221
            C+ G L +A+ +   M+S    NG +   +I +Y+ I+ +LCK G  ++A E+F +++G
Sbjct: 357 LCKEGRLDLAIGIMDYMIS----NGCLP--DIVNYNTILAALCKNGNANQALEIFNKLRG 410

Query: 222 -----------------------------------RGINPAVVVCTTLIHGFCCAGNWEE 246
                                              +G++P  +   +LI   C  G  EE
Sbjct: 411 MGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGVDPDEITYNSLISCLCRDGLVEE 470

Query: 247 VNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMD 306
             GL  +M   G RP ++++N+++  LCK  +I++A G+   MI++G  P+  TY  L++
Sbjct: 471 AIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIE 530

Query: 307 GYCLVGRIDTAREIFLSMHSK 327
           G    G    A E+  S+ S+
Sbjct: 531 GIGFAGWRTEAMELANSLFSR 551


>gi|414865374|tpg|DAA43931.1| TPA: hypothetical protein ZEAMMB73_168023 [Zea mays]
          Length = 793

 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 152/546 (27%), Positives = 261/546 (47%), Gaps = 37/546 (6%)

Query: 9   CLFSSETVSKVKLSSLFKSPRQIAAVSSPETQLNEF------------------LHENCK 50
           C+  S   +   LS+L +SP      +SP+  L+ F                  +H +C 
Sbjct: 167 CVRPSLQAANAVLSALARSPS-----TSPQASLDAFHSLIALRLHPNHYTFNLLVHTHCS 221

Query: 51  SGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDF 110
            G   L +A      M     SP   ++N L  A  +        +   ++   G++P  
Sbjct: 222 KG--TLADALSTLSKMQGFGLSPDAVTYNTLLNAHCRKGMLGEARTLLARMKKEGIVPTR 279

Query: 111 LTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSV 170
            T N L++ +            IK+AT + + M AFG  PD+ TY  L  G C+ G +  
Sbjct: 280 ATYNTLVSAYARL-------GWIKQATDVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDE 332

Query: 171 ALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVV 230
           A +L  +M     + G++S  ++ +Y+ ++D+  K      A  L  EM+ +G+  ++V 
Sbjct: 333 AFKLKDEM----EQLGIVSP-DVVTYNTLVDACFKCQRSSDALNLLEEMREKGVKSSLVT 387

Query: 231 CTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMI 290
              ++ G C  G  EE  G    M + G  P+++T+N +ID  CK G + +A  L++ M+
Sbjct: 388 HNIIVKGLCREGQLEEALGRLEMMTEEGLTPDVITYNTLIDASCKAGNVAKAFVLMDEMV 447

Query: 291 QRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVE 350
           + GL  D FT N+L+   C   R + A E+  +   +G     VSY  ++  Y K    E
Sbjct: 448 RSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRAPPQRGFVPDEVSYGTVMAAYFKEYKPE 507

Query: 351 EAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILI 410
            A+ L+ ++I   +  ++ TYNTL+ GL   G+   A    +E+    + PD +TYNI+I
Sbjct: 508 PALCLWDEMIKRKLTPSISTYNTLIKGLSTMGKLTEAIDKLNELMEMGLVPDDTTYNIII 567

Query: 411 DGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLV 470
              CK   +++A +  + +  N F+  +   N L++GLC  GRL+ A +LF    +KG  
Sbjct: 568 HAYCKEGDLEKAFQFHNKMVENSFKPDVVTCNTLMNGLCLYGRLEKAMKLFESWVEKGKK 627

Query: 471 PTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVEL 530
             V+TY+ +I  LC+   ++ A  F   ME  G  P+V T+N L+    +  ++ +  ++
Sbjct: 628 VDVITYNTLIQALCKDNDVDTALRFFADMEVRGLQPDVFTYNVLLSALSEAGRSVEAQKM 687

Query: 531 LHKMAE 536
           LHK+ E
Sbjct: 688 LHKLNE 693



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 152/554 (27%), Positives = 243/554 (43%), Gaps = 87/554 (15%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
           N  L+ +C+ G+  L EAR     M      P  +++N L  A A+             +
Sbjct: 248 NTLLNAHCRKGM--LGEARTLLARMKKEGIVPTRATYNTLVSAYARLGWIKQATDVVEAM 305

Query: 102 VSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFG-VRPDVITYGTLIN 160
            + G  PD  T N+L         GLC   ++ EA  L   M   G V PDV+TY TL++
Sbjct: 306 TAFGFEPDLWTYNVLAA-------GLCQAGKVDEAFKLKDEMEQLGIVSPDVVTYNTLVD 358

Query: 161 GFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMK 220
              +    S AL L ++M     E G+  K+++ +++II+  LC+EG +++A      M 
Sbjct: 359 ACFKCQRSSDALNLLEEM----REKGV--KSSLVTHNIIVKGLCREGQLEEALGRLEMMT 412

Query: 221 GRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKIN 280
             G+ P V+   TLI   C AGN  +   L  EM+  G + +  T N ++  LCK  +  
Sbjct: 413 EEGLTPDVITYNTLIDASCKAGNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYE 472

Query: 281 EANGLLELMIQRGLNPDRF-----------------------------------TYNSLM 305
           EA  LL    QRG  PD                                     TYN+L+
Sbjct: 473 EAEELLRAPPQRGFVPDEVSYGTVMAAYFKEYKPEPALCLWDEMIKRKLTPSISTYNTLI 532

Query: 306 DGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVR 365
            G   +G++  A +    +   G      +YNI+I+ YCK  ++E+A   + +++ N  +
Sbjct: 533 KGLSTMGKLTEAIDKLNELMEMGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMVENSFK 592

Query: 366 QTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKL 425
             V+T NTL++GL   G+   A KLF+       + D+ TYN LI  LCK+N V  A++ 
Sbjct: 593 PDVVTCNTLMNGLCLYGRLEKAMKLFESWVEKGKKVDVITYNTLIQALCKDNDVDTALRF 652

Query: 426 FHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKG------LVPTVV----- 474
           F  +E+   +  +  +N L+  L +AGR   A ++ HKL + G        P++      
Sbjct: 653 FADMEVRGLQPDVFTYNVLLSALSEAGRSVEAQKMLHKLNESGKLYGRFFYPSIKSSVEA 712

Query: 475 -------------------------TYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVV 509
                                    +Y+  I  LC  G+L++A   L  M + G + +  
Sbjct: 713 VETGKDPEVKSDIESVGNTQGDDQESYNKYIKELCIGGQLKEAKAVLDEMMQKGMSVDNS 772

Query: 510 TFNTLMHGFLQNNK 523
           T+ TLM G ++  K
Sbjct: 773 TYITLMEGLIKRQK 786



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 119/423 (28%), Positives = 201/423 (47%), Gaps = 29/423 (6%)

Query: 148 VRPDVITYGTLINGFCRTGNLS-----------VALRLHKKMVSGDYENGLISKTNIFSY 196
           VRP +     +++   R+ + S           +ALRLH                N +++
Sbjct: 168 VRPSLQAANAVLSALARSPSTSPQASLDAFHSLIALRLHP---------------NHYTF 212

Query: 197 SIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLD 256
           ++++ + C +G +  A     +M+G G++P  V   TL++  C  G   E   L   M  
Sbjct: 213 NLLVHTHCSKGTLADALSTLSKMQGFGLSPDAVTYNTLLNAHCRKGMLGEARTLLARMKK 272

Query: 257 LGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDT 316
            G  P   T+N ++    + G I +A  ++E M   G  PD +TYN L  G C  G++D 
Sbjct: 273 EGIVPTRATYNTLVSAYARLGWIKQATDVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDE 332

Query: 317 AREIFLSMHSKG-CKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLL 375
           A ++   M   G     VV+YN L++   K     +A++L  ++   GV+ +++T+N ++
Sbjct: 333 AFKLKDEMEQLGIVSPDVVTYNTLVDACFKCQRSSDALNLLEEMREKGVKSSLVTHNIIV 392

Query: 376 SGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFE 435
            GL + GQ   A    + M    + PD+ TYN LID  CK   V +A  L   +  +  +
Sbjct: 393 KGLCREGQLEEALGRLEMMTEEGLTPDVITYNTLIDASCKAGNVAKAFVLMDEMVRSGLK 452

Query: 436 FGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDF 495
                 N L+  LCK  R + A EL    PQ+G VP  V+Y  ++    ++ K E A   
Sbjct: 453 MDTFTLNTLLYNLCKEKRYEEAEELLRAPPQRGFVPDEVSYGTVMAAYFKEYKPEPALCL 512

Query: 496 LLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLL 555
              M K    P++ T+NTL+ G     K ++ ++ L+++ E    LVPDDTT++I++   
Sbjct: 513 WDEMIKRKLTPSISTYNTLIKGLSTMGKLTEAIDKLNELME--MGLVPDDTTYNIIIHAY 570

Query: 556 AKD 558
            K+
Sbjct: 571 CKE 573



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 102/353 (28%), Positives = 176/353 (49%), Gaps = 6/353 (1%)

Query: 212 AKELFLEMKGRG-INPAVVVCTTLIHGFCCAGNWEEVNGL--FIEMLDLGPRPNLLTFNV 268
           A +L    + RG + P++     ++     + +      L  F  ++ L   PN  TFN+
Sbjct: 155 AAQLLHSFRRRGCVRPSLQAANAVLSALARSPSTSPQASLDAFHSLIALRLHPNHYTFNL 214

Query: 269 MIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKG 328
           ++   C  G + +A   L  M   GL+PD  TYN+L++ +C  G +  AR +   M  +G
Sbjct: 215 LVHTHCSKGTLADALSTLSKMQGFGLSPDAVTYNTLLNAHCRKGMLGEARTLLARMKKEG 274

Query: 329 CKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQ 388
              T  +YN L++ Y ++  +++A  +   + + G    + TYN L +GL QAG+   A 
Sbjct: 275 IVPTRATYNTLVSAYARLGWIKQATDVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAF 334

Query: 389 KLFDEM-KLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDG 447
           KL DEM +L  V PD+ TYN L+D   K     +A+ L   +     +  +   N ++ G
Sbjct: 335 KLKDEMEQLGIVSPDVVTYNTLVDACFKCQRSSDALNLLEEMREKGVKSSLVTHNIIVKG 394

Query: 448 LCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPN 507
           LC+ G+L+ A      + ++GL P V+TY+ +I   C+ G + KA   +  M ++G   +
Sbjct: 395 LCREGQLEEALGRLEMMTEEGLTPDVITYNTLIDASCKAGNVAKAFVLMDEMVRSGLKMD 454

Query: 508 VVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEK 560
             T NTL++   +  +  +  ELL   A P+R  VPD+ ++  V+    K+ K
Sbjct: 455 TFTLNTLLYNLCKEKRYEEAEELLR--APPQRGFVPDEVSYGTVMAAYFKEYK 505



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 85/344 (24%), Positives = 149/344 (43%), Gaps = 22/344 (6%)

Query: 41  LNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRK 100
           LN  L+  CK       EA             P   S+  +  A  K    +  +  + +
Sbjct: 458 LNTLLYNLCKEK--RYEEAEELLRAPPQRGFVPDEVSYGTVMAAYFKEYKPEPALCLWDE 515

Query: 101 LVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLIN 160
           ++   L P   T N LI       +GL    ++ EA      ++  G+ PD  TY  +I+
Sbjct: 516 MIKRKLTPSISTYNTLI-------KGLSTMGKLTEAIDKLNELMEMGLVPDDTTYNIIIH 568

Query: 161 GFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMK 220
            +C+ G+L  A + H KMV   +      K ++ + + +++ LC  G ++KA +LF    
Sbjct: 569 AYCKEGDLEKAFQFHNKMVENSF------KPDVVTCNTLMNGLCLYGRLEKAMKLFESWV 622

Query: 221 GRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKIN 280
            +G    V+   TLI   C   + +     F +M   G +P++ T+NV++  L + G+  
Sbjct: 623 EKGKKVDVITYNTLIQALCKDNDVDTALRFFADMEVRGLQPDVFTYNVLLSALSEAGRSV 682

Query: 281 EANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAR--EIFLSMHSKGCKH--TVVSY 336
           EA  +L  + + G    RF Y S+      V  ++T +  E+   + S G        SY
Sbjct: 683 EAQKMLHKLNESGKLYGRFFYPSIKSS---VEAVETGKDPEVKSDIESVGNTQGDDQESY 739

Query: 337 NILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQ 380
           N  I   C    ++EA ++  +++  G+     TY TL+ GL +
Sbjct: 740 NKYIKELCIGGQLKEAKAVLDEMMQKGMSVDNSTYITLMEGLIK 783


>gi|255586501|ref|XP_002533891.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223526155|gb|EEF28491.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 701

 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 143/481 (29%), Positives = 258/481 (53%), Gaps = 17/481 (3%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
           P + S+N L  A  +   +D   SF R   S+ + P+  T NILI       +  C + +
Sbjct: 114 PGVRSYNTLLNAFVELNEWDRAESFSRYFESMDVSPNLQTYNILI-------KISCKKQQ 166

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
           I++A  L   M +  ++PDV +YGTLING  + G+L  AL++  +M       G+++  +
Sbjct: 167 IEKAISLLDWMWSQNLKPDVFSYGTLINGMVKVGDLLGALKVFDEMSV----RGVVA--D 220

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEM-KGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
           +  Y+++ID   K G  DK KE++  + K   + P VV    +I+G C  G ++E   ++
Sbjct: 221 VTCYNMLIDGFFKHGDYDKGKEIWERLVKDCSVYPNVVTYNIMINGLCKCGRFDESLEIW 280

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
             M       ++ T++ +I  LC+ G I+ A  + + +++  L  D  T+N++++G+C  
Sbjct: 281 ERMTKNEREKDMFTYSSLIHGLCEAGNIDGAVRVYKEIVESSLVVDAVTHNAMLNGFCRA 340

Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
           G+I  + E+++ M  + C+ TVVSYNILI G  +   VEEA+S++  +   G R    TY
Sbjct: 341 GKIKESFELWMVMGKENCQ-TVVSYNILIKGLFENGKVEEAISIWELLCKKGCRPESTTY 399

Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
             L+ GL + G+   A K+F E +    + D   Y+ ++DGLCK   + EA+ + + ++ 
Sbjct: 400 GVLIHGLCKNGRLNKALKIFKEAEDGPGKLDAYAYSSMVDGLCKEGRMDEAISIVNQMDK 459

Query: 432 NKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEK 491
             ++    + N LI+G  +A +L++A   F ++  KG  PT+V+Y+ +I GLC+  +  +
Sbjct: 460 RGYKLDPHVCNPLINGFVRASKLEDAINFFREMECKGCSPTIVSYNTLIKGLCKAERFSE 519

Query: 492 ANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIV 551
           A  F+  M +    P+++T + LM G  Q  K    + L  +    ++   PD T ++I+
Sbjct: 520 AYSFVKEMLEKEWKPDMITCSLLMDGLCQEKKIEMALNLWQQAL--DKGFKPDITMYNIL 577

Query: 552 V 552
           +
Sbjct: 578 M 578



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 138/491 (28%), Positives = 255/491 (51%), Gaps = 17/491 (3%)

Query: 63  FGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLV-SIGLLPDFLTLNILINCFG 121
           F  M+       ++ +N+L     K+  YD     + +LV    + P+ +T NI+IN   
Sbjct: 209 FDEMSVRGVVADVTCYNMLIDGFFKHGDYDKGKEIWERLVKDCSVYPNVVTYNIMIN--- 265

Query: 122 NKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSG 181
               GLC   R  E+  +++ M       D+ TY +LI+G C  GN+  A+R++K++V  
Sbjct: 266 ----GLCKCGRFDESLEIWERMTKNEREKDMFTYSSLIHGLCEAGNIDGAVRVYKEIV-- 319

Query: 182 DYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCA 241
             E+ L+   +  +++ +++  C+ G + ++ EL++ M G+     VV    LI G    
Sbjct: 320 --ESSLV--VDAVTHNAMLNGFCRAGKIKESFELWMVM-GKENCQTVVSYNILIKGLFEN 374

Query: 242 GNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTY 301
           G  EE   ++  +   G RP   T+ V+I  LCK G++N+A  + +         D + Y
Sbjct: 375 GKVEEAISIWELLCKKGCRPESTTYGVLIHGLCKNGRLNKALKIFKEAEDGPGKLDAYAY 434

Query: 302 NSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIIS 361
           +S++DG C  GR+D A  I   M  +G K      N LING+ +   +E+A++ +R++  
Sbjct: 435 SSMVDGLCKEGRMDEAISIVNQMDKRGYKLDPHVCNPLINGFVRASKLEDAINFFREMEC 494

Query: 362 NGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQE 421
            G   T+++YNTL+ GL +A +   A     EM     +PD+ T ++L+DGLC+   ++ 
Sbjct: 495 KGCSPTIVSYNTLIKGLCKAERFSEAYSFVKEMLEKEWKPDMITCSLLMDGLCQEKKIEM 554

Query: 422 AVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIH 481
           A+ L+       F+  I ++N L+ GLC   +L++A +L+  + +   VP +VT + ++ 
Sbjct: 555 ALNLWQQALDKGFKPDITMYNILMHGLCSVCKLEDALQLYSHMKRSTCVPNLVTRNTLME 614

Query: 482 GLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNL 541
           GL +    EKA++    + K+G  P+++++N  + G    ++ S  +E L+      R +
Sbjct: 615 GLYKVRDYEKASEIWDCILKDGLHPDIISYNITIKGLCSCSRISDAIEFLNDAL--NRGI 672

Query: 542 VPDDTTFSIVV 552
           +P   T++I+V
Sbjct: 673 LPTAVTWNILV 683



 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 150/551 (27%), Positives = 256/551 (46%), Gaps = 48/551 (8%)

Query: 33  AVSSPETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYD 92
            V S  T LN F+  N        + A  F  Y   M  SP + ++N+L     K +  +
Sbjct: 115 GVRSYNTLLNAFVELN------EWDRAESFSRYFESMDVSPNLQTYNILIKISCKKQQIE 168

Query: 93  AVISFYRKLVSIGLLPDFLTLNILIN----------------------------CFGNKE 124
             IS    + S  L PD  +   LIN                            C+    
Sbjct: 169 KAISLLDWMWSQNLKPDVFSYGTLINGMVKVGDLLGALKVFDEMSVRGVVADVTCYNMLI 228

Query: 125 RGLCVENRIKEATWLFKNMIA-FGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDY 183
            G        +   +++ ++    V P+V+TY  +ING C+ G    +L + ++M   + 
Sbjct: 229 DGFFKHGDYDKGKEIWERLVKDCSVYPNVVTYNIMINGLCKCGRFDESLEIWERMTKNER 288

Query: 184 ENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGN 243
           E       ++F+YS +I  LC+ G +D A  ++ E+    +    V    +++GFC AG 
Sbjct: 289 EK------DMFTYSSLIHGLCEAGNIDGAVRVYKEIVESSLVVDAVTHNAMLNGFCRAGK 342

Query: 244 WEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNS 303
            +E   L++ M     +  ++++N++I  L + GK+ EA  + EL+ ++G  P+  TY  
Sbjct: 343 IKESFELWMVMGKENCQ-TVVSYNILIKGLFENGKVEEAISIWELLCKKGCRPESTTYGV 401

Query: 304 LMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNG 363
           L+ G C  GR++ A +IF        K    +Y+ +++G CK   ++EA+S+  Q+   G
Sbjct: 402 LIHGLCKNGRLNKALKIFKEAEDGPGKLDAYAYSSMVDGLCKEGRMDEAISIVNQMDKRG 461

Query: 364 VRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAV 423
            +      N L++G  +A +   A   F EM+     P + +YN LI GLCK     EA 
Sbjct: 462 YKLDPHVCNPLINGFVRASKLEDAINFFREMECKGCSPTIVSYNTLIKGLCKAERFSEAY 521

Query: 424 KLFHMLEMNKFEFGIEIFNC--LIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIH 481
                 EM + E+  ++  C  L+DGLC+  +++ A  L+ +   KG  P +  Y+I++H
Sbjct: 522 SFVK--EMLEKEWKPDMITCSLLMDGLCQEKKIEMALNLWQQALDKGFKPDITMYNILMH 579

Query: 482 GLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNL 541
           GLC   KLE A     +M+++ C PN+VT NTLM G  +     K  E+   + +    L
Sbjct: 580 GLCSVCKLEDALQLYSHMKRSTCVPNLVTRNTLMEGLYKVRDYEKASEIWDCILKD--GL 637

Query: 542 VPDDTTFSIVV 552
            PD  +++I +
Sbjct: 638 HPDIISYNITI 648



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 132/452 (29%), Positives = 235/452 (51%), Gaps = 34/452 (7%)

Query: 140 FKNMIA-FGVRPDVITYGTLINGFC------------------------RTGNLSVALRL 174
           F+NM   FG +P V +Y TL+N F                         +T N+ + +  
Sbjct: 103 FQNMQDIFGCKPGVRSYNTLLNAFVELNEWDRAESFSRYFESMDVSPNLQTYNILIKISC 162

Query: 175 HKKMVSG-----DYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVV 229
            K+ +       D+      K ++FSY  +I+ + K G +  A ++F EM  RG+   V 
Sbjct: 163 KKQQIEKAISLLDWMWSQNLKPDVFSYGTLINGMVKVGDLLGALKVFDEMSVRGVVADVT 222

Query: 230 VCTTLIHGFCCAGNWEEVNGLFIEML-DLGPRPNLLTFNVMIDCLCKGGKINEANGLLEL 288
               LI GF   G++++   ++  ++ D    PN++T+N+MI+ LCK G+ +E+  + E 
Sbjct: 223 CYNMLIDGFFKHGDYDKGKEIWERLVKDCSVYPNVVTYNIMINGLCKCGRFDESLEIWER 282

Query: 289 MIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILN 348
           M +     D FTY+SL+ G C  G ID A  ++  +         V++N ++NG+C+   
Sbjct: 283 MTKNEREKDMFTYSSLIHGLCEAGNIDGAVRVYKEIVESSLVVDAVTHNAMLNGFCRAGK 342

Query: 349 VEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNI 408
           ++E+  L+  ++     QTV++YN L+ GLF+ G+   A  +++ +      P+ +TY +
Sbjct: 343 IKESFELW-MVMGKENCQTVVSYNILIKGLFENGKVEEAISIWELLCKKGCRPESTTYGV 401

Query: 409 LIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKG 468
           LI GLCKN  + +A+K+F   E    +     ++ ++DGLCK GR+D A  + +++ ++G
Sbjct: 402 LIHGLCKNGRLNKALKIFKEAEDGPGKLDAYAYSSMVDGLCKEGRMDEAISIVNQMDKRG 461

Query: 469 LVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVV 528
                   + +I+G  R  KLE A +F   ME  GC+P +V++NTL+ G  +  + S+  
Sbjct: 462 YKLDPHVCNPLINGFVRASKLEDAINFFREMECKGCSPTIVSYNTLIKGLCKAERFSEAY 521

Query: 529 ELLHKMAEPERNLVPDDTTFSIVVDLLAKDEK 560
             + +M E E    PD  T S+++D L +++K
Sbjct: 522 SFVKEMLEKEWK--PDMITCSLLMDGLCQEKK 551



 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 105/373 (28%), Positives = 198/373 (53%), Gaps = 9/373 (2%)

Query: 199 IIDSLCKEGLVDKAKELFLEMKG-RGINPAVVVCTTLIHGFCCAGNWEEVNGL--FIEML 255
           +I +  K  + +KA + F  M+   G  P V    TL++ F     W+       + E +
Sbjct: 86  VIKAYAKNKMSNKALDTFQNMQDIFGCKPGVRSYNTLLNAFVELNEWDRAESFSRYFESM 145

Query: 256 DLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRID 315
           D+ P  NL T+N++I   CK  +I +A  LL+ M  + L PD F+Y +L++G   VG + 
Sbjct: 146 DVSP--NLQTYNILIKISCKKQQIEKAISLLDWMWSQNLKPDVFSYGTLINGMVKVGDLL 203

Query: 316 TAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISN-GVRQTVITYNTL 374
            A ++F  M  +G    V  YN+LI+G+ K  + ++   ++ +++ +  V   V+TYN +
Sbjct: 204 GALKVFDEMSVRGVVADVTCYNMLIDGFFKHGDYDKGKEIWERLVKDCSVYPNVVTYNIM 263

Query: 375 LSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKF 434
           ++GL + G+   + ++++ M     E D+ TY+ LI GLC+   +  AV+++  +  +  
Sbjct: 264 INGLCKCGRFDESLEIWERMTKNEREKDMFTYSSLIHGLCEAGNIDGAVRVYKEIVESSL 323

Query: 435 EFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKAND 494
                  N +++G C+AG++  ++EL+  + ++    TVV+Y+I+I GL   GK+E+A  
Sbjct: 324 VVDAVTHNAMLNGFCRAGKIKESFELWMVMGKEN-CQTVVSYNILIKGLFENGKVEEAIS 382

Query: 495 FLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDL 554
               + K GC P   T+  L+HG  +N + +K +++  +  +    L  D   +S +VD 
Sbjct: 383 IWELLCKKGCRPESTTYGVLIHGLCKNGRLNKALKIFKEAEDGPGKL--DAYAYSSMVDG 440

Query: 555 LAKDEKYHECSAV 567
           L K+ +  E  ++
Sbjct: 441 LCKEGRMDEAISI 453


>gi|224095732|ref|XP_002310456.1| predicted protein [Populus trichocarpa]
 gi|222853359|gb|EEE90906.1| predicted protein [Populus trichocarpa]
          Length = 721

 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 160/574 (27%), Positives = 267/574 (46%), Gaps = 79/574 (13%)

Query: 38  ETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISF 97
           E  L  F H  CKSG     + R     +   +  P    +  +   + +   ++  + F
Sbjct: 10  EFTLGCFAHSLCKSG-----KWREALSLLEKEEFVPDTVLYTKMISGLCEASLFEEAMDF 64

Query: 98  YRKLVSIGLLPDFLTLNILI-NCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYG 156
             ++ +   LP+ LT  IL+  C   ++ G C   RI         MI  G  P    + 
Sbjct: 65  LTRMRASSCLPNVLTYRILLCGCLNKEKLGRC--KRI------LSMMITEGCYPSPRIFN 116

Query: 157 TLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCK-----EGLVDK 211
           +L++ +CR+G+ + A +L KKMV    + G +       Y+I+I  +C      + ++D 
Sbjct: 117 SLVHAYCRSGDYAYAYKLLKKMVQCGCQPGYV------VYNILIGGICSSEEPGKDVLDL 170

Query: 212 AKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMID 271
           A++ + EM   G+    V  +      C  G +E+   +  EM+  G  P+  T++ +I 
Sbjct: 171 AEKAYGEMLEAGVVLNKVNISNFSRCLCGIGKFEKAYNVIREMMSKGFIPDTSTYSKVIG 230

Query: 272 CLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKH 331
            LC   K+ +A  L + M + G+ PD + Y +L+D +C  G I+ AR  F  M   GC  
Sbjct: 231 YLCNASKVEKAFQLFQEMKRNGIAPDVYVYTTLIDSFCKAGFIEQARNWFDEMERDGCAP 290

Query: 332 TVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLF 391
            VV+Y  LI+ Y K   V +A  +Y  ++S G    ++TY  L+ GL +AG+   A +++
Sbjct: 291 NVVTYTALIHAYLKSRKVSKANEVYEMMLSKGCTPNIVTYTALIDGLCKAGKIEKASQIY 350

Query: 392 DEMKLYNV-----------------EPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKF 434
             MK  NV                 EP++ TY  L+DGLCK   V+EA  L   + +   
Sbjct: 351 KIMKKENVEIPDVDMHFRVVDGASNEPNVFTYGALVDGLCKAYQVKEARDLLKSMSVEGC 410

Query: 435 EFGIEIFNCLIDGLCKAGRLDNAWELF--------------------------------- 461
           E    +++ LIDG CKAG+LD A E+F                                 
Sbjct: 411 EPNHVVYDALIDGCCKAGKLDEAQEVFTTMLECGYDPNVYTYSSLIDRLFKDKRLDLALK 470

Query: 462 --HKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFL 519
              K+ +    P VV Y+ MI GLC+ GK ++A   ++ ME+ GC PNVVT+  ++ GF 
Sbjct: 471 VLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMVMMEEKGCNPNVVTYTAMIDGFG 530

Query: 520 QNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
           ++ +  K +ELL +M+   +   P+  T+ ++++
Sbjct: 531 KSGRVEKCLELLQQMS--SKGCAPNFVTYRVLIN 562



 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 155/484 (32%), Positives = 243/484 (50%), Gaps = 29/484 (5%)

Query: 71  PSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCF-GNKERGLCV 129
           PSP I  FN L  A  ++  Y       +K+V  G  P ++  NILI     ++E G  V
Sbjct: 110 PSPRI--FNSLVHAYCRSGDYAYAYKLLKKMVQCGCQPGYVVYNILIGGICSSEEPGKDV 167

Query: 130 ENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLIS 189
            +  ++A   +  M+  GV  + +         C  G    A  + ++M+S     G I 
Sbjct: 168 LDLAEKA---YGEMLEAGVVLNKVNISNFSRCLCGIGKFEKAYNVIREMMS----KGFIP 220

Query: 190 KTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNG 249
            T+  +YS +I  LC    V+KA +LF EMK  GI P V V TTLI  FC AG  E+   
Sbjct: 221 DTS--TYSKVIGYLCNASKVEKAFQLFQEMKRNGIAPDVYVYTTLIDSFCKAGFIEQARN 278

Query: 250 LFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYC 309
            F EM   G  PN++T+  +I    K  K+++AN + E+M+ +G  P+  TY +L+DG C
Sbjct: 279 WFDEMERDGCAPNVVTYTALIHAYLKSRKVSKANEVYEMMLSKGCTPNIVTYTALIDGLC 338

Query: 310 LVGRIDTAREIF------------LSMHSK-----GCKHTVVSYNILINGYCKILNVEEA 352
             G+I+ A +I+            + MH +       +  V +Y  L++G CK   V+EA
Sbjct: 339 KAGKIEKASQIYKIMKKENVEIPDVDMHFRVVDGASNEPNVFTYGALVDGLCKAYQVKEA 398

Query: 353 MSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDG 412
             L + +   G     + Y+ L+ G  +AG+   AQ++F  M     +P++ TY+ LID 
Sbjct: 399 RDLLKSMSVEGCEPNHVVYDALIDGCCKAGKLDEAQEVFTTMLECGYDPNVYTYSSLIDR 458

Query: 413 LCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPT 472
           L K+  +  A+K+   +  N     + I+  +IDGLCK G+ D A++L   + +KG  P 
Sbjct: 459 LFKDKRLDLALKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMVMMEEKGCNPN 518

Query: 473 VVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLH 532
           VVTY+ MI G  + G++EK  + L  M   GCAPN VT+  L++         +  +LL 
Sbjct: 519 VVTYTAMIDGFGKSGRVEKCLELLQQMSSKGCAPNFVTYRVLINHCCSTGLLDEAHKLLE 578

Query: 533 KMAE 536
           +M +
Sbjct: 579 EMKQ 582



 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 138/527 (26%), Positives = 233/527 (44%), Gaps = 43/527 (8%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           C  GI    +A      M      P  S+++ + G +      +     ++++   G+ P
Sbjct: 196 CLCGIGKFEKAYNVIREMMSKGFIPDTSTYSKVIGYLCNASKVEKAFQLFQEMKRNGIAP 255

Query: 109 DFLTLNILI-------------NCFGNKERGLCVEN---------------RIKEATWLF 140
           D      LI             N F   ER  C  N               ++ +A  ++
Sbjct: 256 DVYVYTTLIDSFCKAGFIEQARNWFDEMERDGCAPNVVTYTALIHAYLKSRKVSKANEVY 315

Query: 141 KNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYE-----------NGLIS 189
           + M++ G  P+++TY  LI+G C+ G +  A +++K M   + E           +G  +
Sbjct: 316 EMMLSKGCTPNIVTYTALIDGLCKAGKIEKASQIYKIMKKENVEIPDVDMHFRVVDGASN 375

Query: 190 KTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNG 249
           + N+F+Y  ++D LCK   V +A++L   M   G  P  VV   LI G C AG  +E   
Sbjct: 376 EPNVFTYGALVDGLCKAYQVKEARDLLKSMSVEGCEPNHVVYDALIDGCCKAGKLDEAQE 435

Query: 250 LFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYC 309
           +F  ML+ G  PN+ T++ +ID L K  +++ A  +L  M++    P+   Y  ++DG C
Sbjct: 436 VFTTMLECGYDPNVYTYSSLIDRLFKDKRLDLALKVLSKMLENSCAPNVVIYTEMIDGLC 495

Query: 310 LVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVI 369
            VG+ D A ++ + M  KGC   VV+Y  +I+G+ K   VE+ + L +Q+ S G     +
Sbjct: 496 KVGKTDEAYKLMVMMEEKGCNPNVVTYTAMIDGFGKSGRVEKCLELLQQMSSKGCAPNFV 555

Query: 370 TYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHML 429
           TY  L++     G    A KL +EMK       ++ Y  +I+G   N     ++ L   +
Sbjct: 556 TYRVLINHCCSTGLLDEAHKLLEEMKQTYWPRHVAGYRKVIEGF--NREFIASLYLSFEI 613

Query: 430 EMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVT--YSIMIHGLCRKG 487
             N       ++  LID   KAGRL+ A EL  +L             +  +I  L    
Sbjct: 614 SENDSVPVAPVYRVLIDNFIKAGRLEIALELNEELSSFSPFSAANQNIHITLIENLSLAH 673

Query: 488 KLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKM 534
           K +KA +    M   G  P +     L+ G L+ N+  + ++LL  +
Sbjct: 674 KADKAFELYADMISRGSIPELSILVHLIKGLLRVNRWEEALQLLDSI 720


>gi|449476143|ref|XP_004154653.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g01110-like [Cucumis sativus]
          Length = 749

 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 152/533 (28%), Positives = 257/533 (48%), Gaps = 50/533 (9%)

Query: 56  LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNI 115
           L E    F  +     S  I++ N L G + +    D     Y ++V  G+  +  TLNI
Sbjct: 203 LREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEVVRGGIELNVYTLNI 262

Query: 116 LINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLH 175
           ++N        LC + + +   +   +M   GV  D++TY TLIN +CR G +  A +L 
Sbjct: 263 MVN-------ALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLL 315

Query: 176 KKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLI 235
               S   E GL+      +Y+ I+  LCK G  D+AK++ +EM   G+ P      TL+
Sbjct: 316 NSFSSRGMEPGLL------TYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLL 369

Query: 236 HGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLN 295
              C   N  E   +F EM   G  P+L++F+ +I  L + G + +A      M + G+ 
Sbjct: 370 VEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIV 429

Query: 296 PDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYN------------------ 337
           PD   Y  L+DG+C  G +  A ++   M ++GC   VV+YN                  
Sbjct: 430 PDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADML 489

Query: 338 -----------------ILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQ 380
                             LI GYCK  N+++A++L+  ++   ++   +TYNTL+ G  +
Sbjct: 490 FNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCK 549

Query: 381 AGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEI 440
           AG+ G A++L+D+M   ++ PD  +Y  +++G C +  + EA+ L   +        +  
Sbjct: 550 AGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVT 609

Query: 441 FNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYME 500
            N LI G C++G +  A+E   K+   G++P   +Y+ +I G  ++  LEKA   +  ME
Sbjct: 610 CNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEME 669

Query: 501 KNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
           K G   N++T+N +++GF    K  +  ++L KM E   N  PD  T+S +++
Sbjct: 670 KRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGIN--PDGATYSSLIN 720



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 138/484 (28%), Positives = 241/484 (49%), Gaps = 15/484 (3%)

Query: 24  LFKSPRQIAAVSSPETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFG 83
            F S  +   V +     N  ++  C+ G++   EA       +     P + ++N +  
Sbjct: 278 FFLSDMEGKGVFADIVTYNTLINAYCREGLVE--EAFQLLNSFSSRGMEPGLLTYNAILY 335

Query: 84  AVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNM 143
            + K   YD       +++ +GL P+  T N L+         +C  + I EA  +F  M
Sbjct: 336 GLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLL-------VEICRRDNILEAQEIFDEM 388

Query: 144 IAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSL 203
              GV PD++++ +LI    R G+L  AL   ++M     E   I   N+  Y+I+ID  
Sbjct: 389 SRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREM-----ERSGIVPDNVI-YTILIDGF 442

Query: 204 CKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNL 263
           C+ G +  A ++  EM  RG    VV   T ++G C    + + + LF EM++ G  P+ 
Sbjct: 443 CRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDF 502

Query: 264 LTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLS 323
            TF  +I   CK G +++A  L E M++  L PD+ TYN+L+DG+C  G +  A+E++  
Sbjct: 503 YTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDD 562

Query: 324 MHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQ 383
           M  K      +SY  ++NG+C    + EA++L  Q++  G+R  ++T NTL+ G  ++G 
Sbjct: 563 MIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGD 622

Query: 384 AGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNC 443
              A +   +M    + PD  +YN LIDG  K   +++A  L + +E    +F I  +N 
Sbjct: 623 MPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNL 682

Query: 444 LIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNG 503
           +++G C  G++  A ++  K+ + G+ P   TYS +I+G   +  +++A  F   M + G
Sbjct: 683 ILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKEAFRFHDEMLQRG 742

Query: 504 CAPN 507
             P+
Sbjct: 743 LVPD 746



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 101/362 (27%), Positives = 184/362 (50%), Gaps = 2/362 (0%)

Query: 196 YSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEML 255
           Y +++ +  +   + +  E F  ++ +G++ ++  C  L+ G    G  +    ++ E++
Sbjct: 190 YDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEVV 249

Query: 256 DLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRID 315
             G   N+ T N+M++ LCK  K       L  M  +G+  D  TYN+L++ YC  G ++
Sbjct: 250 RGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVE 309

Query: 316 TAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLL 375
            A ++  S  S+G +  +++YN ++ G CKI   + A  +  +++  G+     TYNTLL
Sbjct: 310 EAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLL 369

Query: 376 SGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFE 435
             + +      AQ++FDEM    V PDL +++ LI  L +N  + +A+  F  +E +   
Sbjct: 370 VEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIV 429

Query: 436 FGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDF 495
               I+  LIDG C+ G L +A ++  ++  +G    VVTY+  ++GLC+K     A+  
Sbjct: 430 PDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADML 489

Query: 496 LLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLL 555
              M + G  P+  TF TL+ G+ ++    K + L   M     NL PD  T++ ++D  
Sbjct: 490 FNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRT--NLKPDKVTYNTLIDGF 547

Query: 556 AK 557
            K
Sbjct: 548 CK 549



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 85/330 (25%), Positives = 145/330 (43%), Gaps = 37/330 (11%)

Query: 264 LTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLS 323
           L +++++    +  K+ E +   +++ ++G++      N L+ G    G +D A EI+  
Sbjct: 188 LIYDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGE 247

Query: 324 MHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQ 383
           +   G +  V + NI++N  CK    E  M     +   GV   ++TYNTL++   + G 
Sbjct: 248 VVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGL 307

Query: 384 AGYAQKLFDEMKLYNVEPDLSTYNILIDGLCK---------------------------- 415
              A +L +      +EP L TYN ++ GLCK                            
Sbjct: 308 VEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNT 367

Query: 416 -------NNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKG 468
                   + + EA ++F  +        +  F+ LI  L + G L  A   F ++ + G
Sbjct: 368 LLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSG 427

Query: 469 LVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVV 528
           +VP  V Y+I+I G CR G L  A      M   GC  +VVT+NT ++G  +    +   
Sbjct: 428 IVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADAD 487

Query: 529 ELLHKMAEPERNLVPDDTTFSIVVDLLAKD 558
            L ++M   ER +VPD  TF+ ++    KD
Sbjct: 488 MLFNEMV--ERGMVPDFYTFTTLIRGYCKD 515



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 64/296 (21%), Positives = 130/296 (43%), Gaps = 54/296 (18%)

Query: 321 FLSMHSKGCKHTVVS--------------------------------------------- 335
            +S H    KH+  S                                             
Sbjct: 123 LVSYHFPNFKHSSXSLSAMVHFLVRGRRLSEAQACILRMVRKSGVSRVKVVESLISTCFY 182

Query: 336 -------YNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQ 388
                  Y++L+  Y +   + E    ++ +   GV  ++   N LL GL + G    A 
Sbjct: 183 FGSVGLIYDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAW 242

Query: 389 KLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGL 448
           +++ E+    +E ++ T NI+++ LCK+   +  +     +E       I  +N LI+  
Sbjct: 243 EIYGEVVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAY 302

Query: 449 CKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNV 508
           C+ G ++ A++L +    +G+ P ++TY+ +++GLC+ GK ++A D L+ M + G  PN 
Sbjct: 303 CREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNA 362

Query: 509 VTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHEC 564
            T+NTL+    + +   +  E+  +M+   R ++PD  +FS ++ +LA++   ++ 
Sbjct: 363 ATYNTLLVEICRRDNILEAQEIFDEMS--RRGVLPDLVSFSSLIGVLARNGHLYQA 416


>gi|357116365|ref|XP_003559952.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g28010-like [Brachypodium distachyon]
          Length = 627

 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 141/448 (31%), Positives = 232/448 (51%), Gaps = 46/448 (10%)

Query: 125 RGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYE 184
           R LC E R  +A  L ++M A GVRPDV+TYGTLI G C   ++  A+ L ++M     E
Sbjct: 121 RALCAERRTGQAVGLLRDMQASGVRPDVVTYGTLIRGLCDAADVDKAVELLREMC----E 176

Query: 185 NGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNW 244
           +G+  + N+  YS ++   CK G  +   ++F EM GRGI P VV+ T LI   C  G  
Sbjct: 177 SGI--EPNVVVYSCLLQGYCKAGRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKV 234

Query: 245 EEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKI------------------------- 279
           ++   +  +M++ G  PN++T+NV+I+ +CK G +                         
Sbjct: 235 KKATQVMDKMMERGLEPNVVTYNVLINSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTL 294

Query: 280 ----------NEANGLLELMI--QRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSK 327
                     +EA GLLE MI  +  + P+  T+NS++ G C  GR+  A ++   M   
Sbjct: 295 ITGLSGVLEMDEAMGLLEEMIHGETMVEPNVVTFNSVIHGLCKTGRMRQAFQVRDMMAEN 354

Query: 328 GCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYA 387
           GC   +V++N+LI G  ++  V++AM L  ++ S+G+     TY+ L++G  +  Q   A
Sbjct: 355 GCACNLVTFNLLIGGLLRVHKVKKAMELMDEMASSGLEPDSFTYSILINGFCKMWQVDRA 414

Query: 388 QKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNK-FEFGIEIFNCLID 446
           + L  +M+   +EP+L  Y  L+  LC+   +++A   F   EM+K  +  +  ++ +I 
Sbjct: 415 ESLLSKMRRDGIEPELVHYIPLLAALCEQGMMEQARNFFD--EMHKNCKLDVVAYSTMIH 472

Query: 447 GLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAP 506
           G C+     +A E    +  +GL+P  VTYS++I+     G L  A   L  M  +G  P
Sbjct: 473 GACRLRDRKSAEEFLKHMLDEGLIPDSVTYSMLINMFANSGDLGAAERVLKQMTASGFVP 532

Query: 507 NVVTFNTLMHGFLQNNKTSKVVELLHKM 534
           +V  F++L+ G+     T KV+EL+ +M
Sbjct: 533 DVAVFDSLIKGYGAKGDTEKVLELIREM 560



 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 136/433 (31%), Positives = 230/433 (53%), Gaps = 11/433 (2%)

Query: 126 GLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYEN 185
            LC +    +A      ++A   RP  ++Y TL+   C       A+ L + M +     
Sbjct: 87  ALCRQGGCLDAALFLLRVMAHETRPTAVSYTTLMRALCAERRTGQAVGLLRDMQASGV-- 144

Query: 186 GLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWE 245
               + ++ +Y  +I  LC    VDKA EL  EM   GI P VVV + L+ G+C AG WE
Sbjct: 145 ----RPDVVTYGTLIRGLCDAADVDKAVELLREMCESGIEPNVVVYSCLLQGYCKAGRWE 200

Query: 246 EVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLM 305
            V+ +F EM   G  P+++ +  +ID LC+ GK+ +A  +++ M++RGL P+  TYN L+
Sbjct: 201 CVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEPNVVTYNVLI 260

Query: 306 DGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQII--SNG 363
           +  C  G +  A  +  +M  KG     V+YN LI G   +L ++EAM L  ++I     
Sbjct: 261 NSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGLSGVLEMDEAMGLLEEMIHGETM 320

Query: 364 VRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAV 423
           V   V+T+N+++ GL + G+   A ++ D M       +L T+N+LI GL + + V++A+
Sbjct: 321 VEPNVVTFNSVIHGLCKTGRMRQAFQVRDMMAENGCACNLVTFNLLIGGLLRVHKVKKAM 380

Query: 424 KLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGL 483
           +L   +  +  E     ++ LI+G CK  ++D A  L  K+ + G+ P +V Y  ++  L
Sbjct: 381 ELMDEMASSGLEPDSFTYSILINGFCKMWQVDRAESLLSKMRRDGIEPELVHYIPLLAAL 440

Query: 484 CRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVP 543
           C +G +E+A +F   M KN C  +VV ++T++HG  +        E L  M +    L+P
Sbjct: 441 CEQGMMEQARNFFDEMHKN-CKLDVVAYSTMIHGACRLRDRKSAEEFLKHMLD--EGLIP 497

Query: 544 DDTTFSIVVDLLA 556
           D  T+S+++++ A
Sbjct: 498 DSVTYSMLINMFA 510



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 133/525 (25%), Positives = 227/525 (43%), Gaps = 88/525 (16%)

Query: 19  VKLSSLFKSPRQIAAVSSPETQL--NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPIS 76
           ++L  L +SP  ++++ S    +  N  L   C+ G   L+ A +    M H +  P   
Sbjct: 57  LRLVPLPESPALLSSLPSVRDAVSYNTVLAALCRQGGC-LDAALFLLRVMAH-ETRPTAV 114

Query: 77  SFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEA 136
           S+  L  A+   R     +   R + + G+ PD +T   LI       RGLC    + +A
Sbjct: 115 SYTTLMRALCAERRTGQAVGLLRDMQASGVRPDVVTYGTLI-------RGLCDAADVDKA 167

Query: 137 TWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSY 196
             L + M   G+ P+V+ Y  L+ G+C+ G      ++ ++M      +G   + ++  Y
Sbjct: 168 VELLREMCESGIEPNVVVYSCLLQGYCKAGRWECVSKVFEEM------SGRGIEPDVVMY 221

Query: 197 SIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLD 256
           + +IDSLC+EG V KA ++  +M  RG+ P VV    LI+  C  G+ +E   L   ML+
Sbjct: 222 TGLIDSLCREGKVKKATQVMDKMMERGLEPNVVTYNVLINSMCKEGSVKEAMSLRNNMLE 281

Query: 257 LGP-------------------------------------RPNLLTFNVMIDCLCKGGKI 279
            G                                       PN++TFN +I  LCK G++
Sbjct: 282 KGVALDAVTYNTLITGLSGVLEMDEAMGLLEEMIHGETMVEPNVVTFNSVIHGLCKTGRM 341

Query: 280 NEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNIL 339
            +A  + ++M + G   +  T+N L+ G   V ++  A E+   M S G +    +Y+IL
Sbjct: 342 RQAFQVRDMMAENGCACNLVTFNLLIGGLLRVHKVKKAMELMDEMASSGLEPDSFTYSIL 401

Query: 340 INGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEM----K 395
           ING+CK+  V+ A SL  ++  +G+   ++ Y  LL+ L + G    A+  FDEM    K
Sbjct: 402 INGFCKMWQVDRAESLLSKMRRDGIEPELVHYIPLLAALCEQGMMEQARNFFDEMHKNCK 461

Query: 396 LYNVE------------------------------PDLSTYNILIDGLCKNNCVQEAVKL 425
           L  V                               PD  TY++LI+    +  +  A ++
Sbjct: 462 LDVVAYSTMIHGACRLRDRKSAEEFLKHMLDEGLIPDSVTYSMLINMFANSGDLGAAERV 521

Query: 426 FHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLV 470
              +  + F   + +F+ LI G    G  +   EL  ++  K + 
Sbjct: 522 LKQMTASGFVPDVAVFDSLIKGYGAKGDTEKVLELIREMTAKDIA 566



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 79/267 (29%), Positives = 138/267 (51%)

Query: 297 DRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLY 356
           D  +YN+++   C  G    A    L + +   + T VSY  L+   C      +A+ L 
Sbjct: 77  DAVSYNTVLAALCRQGGCLDAALFLLRVMAHETRPTAVSYTTLMRALCAERRTGQAVGLL 136

Query: 357 RQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKN 416
           R + ++GVR  V+TY TL+ GL  A     A +L  EM    +EP++  Y+ L+ G CK 
Sbjct: 137 RDMQASGVRPDVVTYGTLIRGLCDAADVDKAVELLREMCESGIEPNVVVYSCLLQGYCKA 196

Query: 417 NCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTY 476
              +   K+F  +     E  + ++  LID LC+ G++  A ++  K+ ++GL P VVTY
Sbjct: 197 GRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEPNVVTY 256

Query: 477 SIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAE 536
           +++I+ +C++G +++A      M + G A + VT+NTL+ G     +  + + LL +M  
Sbjct: 257 NVLINSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGLSGVLEMDEAMGLLEEMIH 316

Query: 537 PERNLVPDDTTFSIVVDLLAKDEKYHE 563
            E  + P+  TF+ V+  L K  +  +
Sbjct: 317 GETMVEPNVVTFNSVIHGLCKTGRMRQ 343


>gi|224123236|ref|XP_002330266.1| predicted protein [Populus trichocarpa]
 gi|222871301|gb|EEF08432.1| predicted protein [Populus trichocarpa]
          Length = 590

 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 153/524 (29%), Positives = 254/524 (48%), Gaps = 32/524 (6%)

Query: 32  AAVSSPETQLNEFLHENCKSGIINLNE-------ARYFFGYMTHMQPSPPISSFNLLFGA 84
           A  S P  QL   L E   SG+ ++ E       AR   G  T++        ++LL  A
Sbjct: 81  APNSKPSLQL---LKETINSGVYSIREVFNELGVARGVLGIKTYVL-------YDLLIRA 130

Query: 85  VAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMI 144
             + +  D     +  +   G++P     N +++ F          NR ++A  L+  M 
Sbjct: 131 CCELKRGDDAFECFDMMKGKGVIPHVHACNDMLSLF-------LKSNRTEKAWVLYAEMF 183

Query: 145 AFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLC 204
              ++  V+T+  +IN  C+ G L  A      M        L  K N+ +Y+ II   C
Sbjct: 184 RMRIKSSVVTFNIMINVLCKEGKLKKAKEFIGLM------EALGIKPNVVTYNTIIHGYC 237

Query: 205 KEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLL 264
             G V+ A+ +F  MK RG+ P      + I G C  G  EE +G+  +M ++G RP  +
Sbjct: 238 SRGRVEGARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAV 297

Query: 265 TFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSM 324
           T+N +ID  C  G +  A    + M++ GL P   TYN L+    L  ++D A  I   M
Sbjct: 298 TYNTLIDGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDEADGIIKEM 357

Query: 325 HSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQA 384
             KG     V+YNILINGYC+  NV++A +L+ ++IS G++ T +TY +L+  L + G+ 
Sbjct: 358 SEKGLVPDSVTYNILINGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGRM 417

Query: 385 GYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCL 444
             A  LF+++    + PDL  +N LIDG C N  +  A  +   ++  K       FN L
Sbjct: 418 KQADDLFEKIVRKGIFPDLIMFNALIDGHCANGNMDRAFAMLKEMDQMKVVPDEVTFNTL 477

Query: 445 IDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGC 504
           + G C+ G+++ A EL  ++  +G+ P  ++Y+ +I G  ++G ++ A      M   G 
Sbjct: 478 MQGRCREGKVEAARELIEEMKSRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMLSIGF 537

Query: 505 APNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTF 548
            P ++T+N L+ G  +N +     +LL +M    + + P+D T+
Sbjct: 538 NPTLLTYNALIQGLCKNEEGDHAEQLLKEMI--SKGITPNDNTY 579



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 133/446 (29%), Positives = 224/446 (50%), Gaps = 13/446 (2%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
           P + + N +     K+   +     Y ++  + +    +T NI+IN        LC E +
Sbjct: 154 PHVHACNDMLSLFLKSNRTEKAWVLYAEMFRMRIKSSVVTFNIMINV-------LCKEGK 206

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
           +K+A      M A G++P+V+TY T+I+G+C  G +  A  +   M       G+  K +
Sbjct: 207 LKKAKEFIGLMEALGIKPNVVTYNTIIHGYCSRGRVEGARMIFDLMKC----RGV--KPD 260

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
            ++Y   I  +CKEG +++A  +  +MK  G+ P  V   TLI G+C  GN E       
Sbjct: 261 SYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNTLIDGYCNKGNLEMAFDYRD 320

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
           +M+  G  P + T+N++I  L    K++EA+G+++ M ++GL PD  TYN L++GYC  G
Sbjct: 321 KMVREGLMPTVSTYNMLIHALFLDCKMDEADGIIKEMSEKGLVPDSVTYNILINGYCRCG 380

Query: 313 RIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYN 372
            +  A  +   M SKG + T V+Y  LI    K   +++A  L+ +I+  G+   +I +N
Sbjct: 381 NVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGRMKQADDLFEKIVRKGIFPDLIMFN 440

Query: 373 TLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMN 432
            L+ G    G    A  +  EM    V PD  T+N L+ G C+   V+ A +L   ++  
Sbjct: 441 ALIDGHCANGNMDRAFAMLKEMDQMKVVPDEVTFNTLMQGRCREGKVEAARELIEEMKSR 500

Query: 433 KFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKA 492
             +     +N LI G  K G + +A+ +  ++   G  PT++TY+ +I GLC+  + + A
Sbjct: 501 GIKPDHISYNTLISGYSKRGDMKDAFRVRDEMLSIGFNPTLLTYNALIQGLCKNEEGDHA 560

Query: 493 NDFLLYMEKNGCAPNVVTFNTLMHGF 518
              L  M   G  PN  T+ +L+ G 
Sbjct: 561 EQLLKEMISKGITPNDNTYLSLIEGI 586



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 130/461 (28%), Positives = 227/461 (49%), Gaps = 19/461 (4%)

Query: 23  SLFKSPRQIAAVSSPETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLF 82
            + K    I  V +    L+ FL  N         +A   +  M  M+    + +FN++ 
Sbjct: 145 DMMKGKGVIPHVHACNDMLSLFLKSN------RTEKAWVLYAEMFRMRIKSSVVTFNIMI 198

Query: 83  GAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKN 142
             + K         F   + ++G+ P+ +T N +I+       G C   R++ A  +F  
Sbjct: 199 NVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIH-------GYCSRGRVEGARMIFDL 251

Query: 143 MIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDS 202
           M   GV+PD  TYG+ I+G C+ G L  A  + +KM     E GL  +    +Y+ +ID 
Sbjct: 252 MKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKM----KEIGL--RPTAVTYNTLIDG 305

Query: 203 LCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPN 262
            C +G ++ A +   +M   G+ P V     LIH        +E +G+  EM + G  P+
Sbjct: 306 YCNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDEADGIIKEMSEKGLVPD 365

Query: 263 LLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFL 322
            +T+N++I+  C+ G + +A  L + MI +G+ P R TY SL+      GR+  A ++F 
Sbjct: 366 SVTYNILINGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGRMKQADDLFE 425

Query: 323 SMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAG 382
            +  KG    ++ +N LI+G+C   N++ A ++ +++    V    +T+NTL+ G  + G
Sbjct: 426 KIVRKGIFPDLIMFNALIDGHCANGNMDRAFAMLKEMDQMKVVPDEVTFNTLMQGRCREG 485

Query: 383 QAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFN 442
           +   A++L +EMK   ++PD  +YN LI G  K   +++A ++   +    F   +  +N
Sbjct: 486 KVEAARELIEEMKSRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMLSIGFNPTLLTYN 545

Query: 443 CLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGL 483
            LI GLCK    D+A +L  ++  KG+ P   TY  +I G+
Sbjct: 546 ALIQGLCKNEEGDHAEQLLKEMISKGITPNDNTYLSLIEGI 586


>gi|242082678|ref|XP_002441764.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
 gi|241942457|gb|EES15602.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
          Length = 695

 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 168/590 (28%), Positives = 283/590 (47%), Gaps = 48/590 (8%)

Query: 8   RCLFSSETVSKVKLSSLFKSPRQIAAVSSPETQLNEFLHENCKSGIINLNEARYFFGYMT 67
           R   ++  V  +  ++L   PR+ A  S  +T L+             L++A      + 
Sbjct: 108 RPHLAASLVDLLHRAALALGPRRSALPSVVDTLLSLLADHGL------LDDAVRALARVR 161

Query: 68  HMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGL 127
            ++  P   + N +   +A+NR    V    R+L  +  +P+  T NI+I+        L
Sbjct: 162 QLRVPPNTRTCNHILLRLARNRQGGLV----RRLFDLLPVPNVFTFNIVIDF-------L 210

Query: 128 CVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKM----VSGDY 183
           C E  + EA  LF  M A G  PDV+TY +LI+G+ + G+L    +L  +M     + D 
Sbjct: 211 CKEGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGDLEEVEQLVSEMRKSGCAADV 270

Query: 184 --ENGLI---SK--------------------TNIFSYSIIIDSLCKEGLVDKAKELFLE 218
              N LI   SK                     N+ ++S  +D+ CKEGLV +A +LF +
Sbjct: 271 VTYNALINCFSKFGRMEKAYSYFGEMKRQGVVANVVTFSTFVDAFCKEGLVQEAMKLFAQ 330

Query: 219 MKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGK 278
           M+ RG+ P     T+L+ G C AG  ++   L  EM+  G  PN++T+ VM+D LCK GK
Sbjct: 331 MRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGK 390

Query: 279 INEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNI 338
           + EA+ +L LM + G+  +   Y +L+ G+ +    + A ++   M +KG +  V  Y  
Sbjct: 391 VAEADNVLSLMERGGVKANELLYTTLIHGHFMNNNSERALDLLNQMKNKGMELDVSLYGT 450

Query: 339 LINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYN 398
           LI G CK   V+EA SL  ++   G+R   + Y T++  LF+AG+   A  L  ++    
Sbjct: 451 LIWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDALFKAGKESEAVALLHKILDSG 510

Query: 399 VEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAW 458
            +P++ TY  LIDGLCK   + EA+  F+ +     +  ++ +  LIDG CK G L+ A 
Sbjct: 511 FQPNVVTYCALIDGLCKAGSISEAISHFNKMRELGLDPNVQAYTALIDGFCKIGSLNKAM 570

Query: 459 ELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGF 518
            L +++  KG+    V Y+ +I G  ++  L+ A      M ++G   ++  +   + GF
Sbjct: 571 HLMNEMIDKGMSLDKVVYTSLIDGYMKQANLQDAFALKTKMIESGLQLDLYCYTCFISGF 630

Query: 519 LQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVS 568
              N   +   +L +M      + PD T ++ ++    K     E S++ 
Sbjct: 631 CNMNMMQEARGVLSEMIGT--GITPDKTVYNCLIRKYQKLGNMEEASSLQ 678



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 111/412 (26%), Positives = 191/412 (46%), Gaps = 36/412 (8%)

Query: 48  NCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLL 107
           NC S    + +A  +FG M        + +F+    A  K       +  + ++   G++
Sbjct: 278 NCFSKFGRMEKAYSYFGEMKRQGVVANVVTFSTFVDAFCKEGLVQEAMKLFAQMRVRGMM 337

Query: 108 PDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGN 167
           P+  T   L++       G C   R+ +A  L   M+  G+ P+V+TY  +++G C+ G 
Sbjct: 338 PNEFTYTSLVD-------GTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGK 390

Query: 168 LSVALR---------------LHKKMVSGDYENGLISKT--------------NIFSYSI 198
           ++ A                 L+  ++ G + N    +               ++  Y  
Sbjct: 391 VAEADNVLSLMERGGVKANELLYTTLIHGHFMNNNSERALDLLNQMKNKGMELDVSLYGT 450

Query: 199 IIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLG 258
           +I  LCK+  VD+AK L  +M G G+ P  V+ TT++     AG   E   L  ++LD G
Sbjct: 451 LIWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDALFKAGKESEAVALLHKILDSG 510

Query: 259 PRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAR 318
            +PN++T+  +ID LCK G I+EA      M + GL+P+   Y +L+DG+C +G ++ A 
Sbjct: 511 FQPNVVTYCALIDGLCKAGSISEAISHFNKMRELGLDPNVQAYTALIDGFCKIGSLNKAM 570

Query: 319 EIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGL 378
            +   M  KG     V Y  LI+GY K  N+++A +L  ++I +G++  +  Y   +SG 
Sbjct: 571 HLMNEMIDKGMSLDKVVYTSLIDGYMKQANLQDAFALKTKMIESGLQLDLYCYTCFISGF 630

Query: 379 FQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLE 430
                   A+ +  EM    + PD + YN LI    K   ++EA  L + +E
Sbjct: 631 CNMNMMQEARGVLSEMIGTGITPDKTVYNCLIRKYQKLGNMEEASSLQNEME 682


>gi|297797449|ref|XP_002866609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297312444|gb|EFH42868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 724

 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 147/500 (29%), Positives = 255/500 (51%), Gaps = 21/500 (4%)

Query: 59  ARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILIN 118
           A  F+  ++   P P + +F ++  A+      D+ +S  R +   G +P+ +    LI+
Sbjct: 196 ANVFYDMLSRKIP-PTLFTFGVVMKALCAVNEVDSALSVLRDMTKHGCVPNSVIYQTLIH 254

Query: 119 CFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKM 178
                    C  NR+ EA  L + M   G  PD  T+  +I G C+   ++ A ++  +M
Sbjct: 255 SLSK-----C--NRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRM 307

Query: 179 VSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGF 238
           +   +    I+      Y  +++ LCK G VD AK+LF  +      P  V+  TLIHGF
Sbjct: 308 LIRGFTPDDIT------YGYLMNGLCKIGRVDAAKDLFYRIP----KPTSVIFNTLIHGF 357

Query: 239 CCAGNWEEVNGLFIEML-DLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPD 297
              G  ++   +  +M+   G  P++ T+N +I    K G +  A  +L  M  +G  P+
Sbjct: 358 VTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKKGLVGLALEVLRDMRNKGCKPN 417

Query: 298 RFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYR 357
            ++Y  L+DG+C +G+ID A  +   M + G K   V +N LI+ +CK   + EA+ ++R
Sbjct: 418 VYSYTILVDGFCKLGKIDEAYNLLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFR 477

Query: 358 QIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNN 417
           ++   G +  V T+N+L+SGL +  +  +A  L  +M    V  +  TYN LI+   +  
Sbjct: 478 EMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRG 537

Query: 418 CVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYS 477
            ++EA KL + +           +N LI GLC+AG +D A  LF K+ + GLVP+ ++ +
Sbjct: 538 EIKEARKLVNEMVFQGSLLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGLVPSSISCN 597

Query: 478 IMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEP 537
           I+I+GLCR G +E+A +F   M   G  P++VTFN+L++G  +  +    + +  K+   
Sbjct: 598 ILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQ-- 655

Query: 538 ERNLVPDDTTFSIVVDLLAK 557
              + PD  T++ ++  L K
Sbjct: 656 AEGIPPDTVTYNTLMSWLCK 675



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 150/480 (31%), Positives = 236/480 (49%), Gaps = 33/480 (6%)

Query: 66  MTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKER 125
           MT     P    +  L  +++K    +  +    ++  +G +PD  T N +I        
Sbjct: 237 MTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVI-------L 289

Query: 126 GLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKK-------- 177
           GLC  +RI EA  +   M+  G  PD ITYG L+NG C+ G +  A  L  +        
Sbjct: 290 GLCKFDRINEAAKMVNRMLIRGFTPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPTSVI 349

Query: 178 ---MVSGDYENGLISKTN------IFSYSIIID---------SLCKEGLVDKAKELFLEM 219
              ++ G   +G +          + SY I+ D            K+GLV  A E+  +M
Sbjct: 350 FNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKKGLVGLALEVLRDM 409

Query: 220 KGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKI 279
           + +G  P V   T L+ GFC  G  +E   L  EM   G +PN + FN +I   CK  +I
Sbjct: 410 RNKGCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMSADGLKPNTVGFNCLISAFCKEHRI 469

Query: 280 NEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNIL 339
            EA  +   M ++G  PD +T+NSL+ G C V  I  A  +   M S+G     V+YN L
Sbjct: 470 PEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTL 529

Query: 340 INGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNV 399
           IN + +   ++EA  L  +++  G     ITYN+L+ GL +AG+   A+ LF++M    +
Sbjct: 530 INAFLRRGEIKEARKLVNEMVFQGSLLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGL 589

Query: 400 EPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWE 459
            P   + NILI+GLC++  V+EAV+    + +      I  FN LI+GLC+AGR+++   
Sbjct: 590 VPSSISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLT 649

Query: 460 LFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFL 519
           +F KL  +G+ P  VTY+ ++  LC+ G +  A   L    ++G  PN  T++ L+   +
Sbjct: 650 MFRKLQAEGIPPDTVTYNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNDRTWSILLQSLV 709



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 131/461 (28%), Positives = 221/461 (47%), Gaps = 31/461 (6%)

Query: 56  LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNI 115
           +NEA      M  M   P   +FN +   + K    +       +++  G  PD +T   
Sbjct: 262 VNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFTPDDITYGY 321

Query: 116 LIN------------------------CFGNKERGLCVENRIKEATWLFKNMI-AFGVRP 150
           L+N                         F     G     R+ +A  +  +M+ ++G+ P
Sbjct: 322 LMNGLCKIGRVDAAKDLFYRIPKPTSVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVP 381

Query: 151 DVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVD 210
           DV TY +LI G+ + G + +AL + + M +         K N++SY+I++D  CK G +D
Sbjct: 382 DVCTYNSLIYGYWKKGLVGLALEVLRDMRNKG------CKPNVYSYTILVDGFCKLGKID 435

Query: 211 KAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMI 270
           +A  L  EM   G+ P  V    LI  FC      E   +F EM   G +P++ TFN +I
Sbjct: 436 EAYNLLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLI 495

Query: 271 DCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCK 330
             LC+  +I  A  LL  MI  G+  +  TYN+L++ +   G I  AR++   M  +G  
Sbjct: 496 SGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSL 555

Query: 331 HTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKL 390
              ++YN LI G C+   V++A SL+ +++ +G+  + I+ N L++GL ++G    A + 
Sbjct: 556 LDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGLVPSSISCNILINGLCRSGMVEEAVEF 615

Query: 391 FDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCK 450
             EM L    PD+ T+N LI+GLC+   +++ + +F  L+          +N L+  LCK
Sbjct: 616 QKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTYNTLMSWLCK 675

Query: 451 AGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEK 491
            G + +A  L  +  + G VP   T+SI++  L  +  L++
Sbjct: 676 GGFVYDACLLLDEGIEDGFVPNDRTWSILLQSLVPQETLDR 716



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 115/413 (27%), Positives = 199/413 (48%), Gaps = 42/413 (10%)

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
           +F++ +++ +LC    VD A  +  +M   G  P  V+  TLIH         E   L  
Sbjct: 211 LFTFGVVMKALCAVNEVDSALSVLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLE 270

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
           EM  +G  P+  TFN +I  LCK  +INEA  ++  M+ RG  PD  TY  LM+G C +G
Sbjct: 271 EMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFTPDDITYGYLMNGLCKIG 330

Query: 313 RIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISN-GVRQTVITY 371
           R+D A+++F  +     K T V +N LI+G+     +++A ++   ++++ G+   V TY
Sbjct: 331 RVDAAKDLFYRIP----KPTSVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTY 386

Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCK---------------- 415
           N+L+ G ++ G  G A ++  +M+    +P++ +Y IL+DG CK                
Sbjct: 387 NSLIYGYWKKGLVGLALEVLRDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMSA 446

Query: 416 ---------NNC----------VQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDN 456
                     NC          + EAV++F  +     +  +  FN LI GLC+   + +
Sbjct: 447 DGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKH 506

Query: 457 AWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMH 516
           A  L   +  +G+V   VTY+ +I+   R+G++++A   +  M   G   + +T+N+L+ 
Sbjct: 507 ALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSLLDEITYNSLIK 566

Query: 517 GFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSK 569
           G  +  +  K   L  KM      LVP   + +I+++ L +     E     K
Sbjct: 567 GLCRAGEVDKARSLFEKMLRD--GLVPSSISCNILINGLCRSGMVEEAVEFQK 617



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 110/405 (27%), Positives = 176/405 (43%), Gaps = 44/405 (10%)

Query: 196 YSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEML 255
           Y ++I  L   G       L ++MK  GI     +  +++  +  AG   +   L +EM 
Sbjct: 108 YQVLIGKLGSNGEFKTIDRLLMQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEMR 167

Query: 256 DL-GPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRI 314
           ++    P   ++NV+++ L  G     A  +   M+ R + P  FT+  +M   C V  +
Sbjct: 168 NVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKALCAVNEV 227

Query: 315 DTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTL 374
           D+A  +   M   GC    V Y  LI+   K   V EA+ L  ++   G      T+N +
Sbjct: 228 DSALSVLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDV 287

Query: 375 LSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKF 434
           + GL +  +   A K+ + M +    PD  TY  L++GLCK   V  A  LF+ +     
Sbjct: 288 ILGLCKFDRINEAAKMVNRMLIRGFTPDDITYGYLMNGLCKIGRVDAAKDLFYRIP---- 343

Query: 435 EFGIEIFNCLIDGLCKAGRLDNA---------------------------W--------- 458
           +    IFN LI G    GRLD+A                           W         
Sbjct: 344 KPTSVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKKGLVGLAL 403

Query: 459 ELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGF 518
           E+   +  KG  P V +Y+I++ G C+ GK+++A + L  M  +G  PN V FN L+  F
Sbjct: 404 EVLRDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMSADGLKPNTVGFNCLISAF 463

Query: 519 LQNNKTSKVVELLHKMAEPERNLVPDDTTF-SIVVDLLAKDEKYH 562
            + ++  + VE+  +M  P +   PD  TF S++  L   DE  H
Sbjct: 464 CKEHRIPEAVEIFREM--PRKGCKPDVYTFNSLISGLCEVDEIKH 506



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 63/251 (25%), Positives = 122/251 (48%), Gaps = 14/251 (5%)

Query: 314 IDTAREIF-LSMHSKGCKHTVVSYNILI-----NGYCKILNVEEAMSLYRQIISNGVRQT 367
           + T+ E+F  +   KG +H+   Y +LI     NG  K ++      L  Q+   G+   
Sbjct: 85  VSTSMELFSWTGSQKGYRHSFDVYQVLIGKLGSNGEFKTID-----RLLMQMKDEGIVFK 139

Query: 368 VITYNTLLSGLFQAGQAGYAQKLFDEMK-LYNVEPDLSTYNILIDGLCKNNCVQEAVKLF 426
              + +++    +AG  G   +L  EM+ +Y+ EP   +YN++++ L   NC + A  +F
Sbjct: 140 ESLFISIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVF 199

Query: 427 HMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRK 486
           + +   K    +  F  ++  LC    +D+A  +   + + G VP  V Y  +IH L + 
Sbjct: 200 YDMLSRKIPPTLFTFGVVMKALCAVNEVDSALSVLRDMTKHGCVPNSVIYQTLIHSLSKC 259

Query: 487 GKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDT 546
            ++ +A   L  M   GC P+  TFN ++ G  + ++ ++  +++++M    R   PDD 
Sbjct: 260 NRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRML--IRGFTPDDI 317

Query: 547 TFSIVVDLLAK 557
           T+  +++ L K
Sbjct: 318 TYGYLMNGLCK 328


>gi|449442579|ref|XP_004139059.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g01110-like [Cucumis sativus]
          Length = 749

 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 152/533 (28%), Positives = 257/533 (48%), Gaps = 50/533 (9%)

Query: 56  LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNI 115
           L E    F  +     S  I++ N L G + +    D     Y ++V  G+  +  TLNI
Sbjct: 203 LREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEVVRGGIELNVYTLNI 262

Query: 116 LINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLH 175
           ++N        LC + + +   +   +M   GV  D++TY TLIN +CR G +  A +L 
Sbjct: 263 MVN-------ALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLL 315

Query: 176 KKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLI 235
               S   E GL+      +Y+ I+  LCK G  D+AK++ +EM   G+ P      TL+
Sbjct: 316 NSFSSRGMEPGLL------TYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLL 369

Query: 236 HGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLN 295
              C   N  E   +F EM   G  P+L++F+ +I  L + G + +A      M + G+ 
Sbjct: 370 VEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIV 429

Query: 296 PDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYN------------------ 337
           PD   Y  L+DG+C  G +  A ++   M ++GC   VV+YN                  
Sbjct: 430 PDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADML 489

Query: 338 -----------------ILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQ 380
                             LI GYCK  N+++A++L+  ++   ++   +TYNTL+ G  +
Sbjct: 490 FNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCK 549

Query: 381 AGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEI 440
           AG+ G A++L+D+M   ++ PD  +Y  +++G C +  + EA+ L   +        +  
Sbjct: 550 AGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVT 609

Query: 441 FNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYME 500
            N LI G C++G +  A+E   K+   G++P   +Y+ +I G  ++  LEKA   +  ME
Sbjct: 610 CNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEME 669

Query: 501 KNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
           K G   N++T+N +++GF    K  +  ++L KM E   N  PD  T+S +++
Sbjct: 670 KRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGIN--PDGATYSSLIN 720



 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 138/484 (28%), Positives = 241/484 (49%), Gaps = 15/484 (3%)

Query: 24  LFKSPRQIAAVSSPETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFG 83
            F S  +   V +     N  ++  C+ G++   EA       +     P + ++N +  
Sbjct: 278 FFLSDMEGKGVFADIVTYNTLINAYCREGLVE--EAFQLLNSFSSRGMEPGLLTYNAILY 335

Query: 84  AVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNM 143
            + K   YD       +++ +GL P+  T N L+         +C  + I EA  +F  M
Sbjct: 336 GLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLL-------VEICRRDNILEAQEIFDEM 388

Query: 144 IAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSL 203
              GV PD++++ +LI    R G+L  AL   ++M     E   I   N+  Y+I+ID  
Sbjct: 389 SRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREM-----ERSGIVPDNVI-YTILIDGF 442

Query: 204 CKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNL 263
           C+ G +  A ++  EM  RG    VV   T ++G C    + + + LF EM++ G  P+ 
Sbjct: 443 CRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDF 502

Query: 264 LTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLS 323
            TF  +I   CK G +++A  L E M++  L PD+ TYN+L+DG+C  G +  A+E++  
Sbjct: 503 YTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDD 562

Query: 324 MHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQ 383
           M  K      +SY  ++NG+C    + EA++L  Q++  G+R  ++T NTL+ G  ++G 
Sbjct: 563 MIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGD 622

Query: 384 AGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNC 443
              A +   +M    + PD  +YN LIDG  K   +++A  L + +E    +F I  +N 
Sbjct: 623 MPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNL 682

Query: 444 LIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNG 503
           +++G C  G++  A ++  K+ + G+ P   TYS +I+G   +  +++A  F   M + G
Sbjct: 683 ILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKEAFRFHDEMLQRG 742

Query: 504 CAPN 507
             P+
Sbjct: 743 LVPD 746



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 101/362 (27%), Positives = 184/362 (50%), Gaps = 2/362 (0%)

Query: 196 YSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEML 255
           Y +++ +  +   + +  E F  ++ +G++ ++  C  L+ G    G  +    ++ E++
Sbjct: 190 YDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEVV 249

Query: 256 DLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRID 315
             G   N+ T N+M++ LCK  K       L  M  +G+  D  TYN+L++ YC  G ++
Sbjct: 250 RGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVE 309

Query: 316 TAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLL 375
            A ++  S  S+G +  +++YN ++ G CKI   + A  +  +++  G+     TYNTLL
Sbjct: 310 EAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLL 369

Query: 376 SGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFE 435
             + +      AQ++FDEM    V PDL +++ LI  L +N  + +A+  F  +E +   
Sbjct: 370 VEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIV 429

Query: 436 FGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDF 495
               I+  LIDG C+ G L +A ++  ++  +G    VVTY+  ++GLC+K     A+  
Sbjct: 430 PDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADML 489

Query: 496 LLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLL 555
              M + G  P+  TF TL+ G+ ++    K + L   M     NL PD  T++ ++D  
Sbjct: 490 FNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRT--NLKPDKVTYNTLIDGF 547

Query: 556 AK 557
            K
Sbjct: 548 CK 549


>gi|326510071|dbj|BAJ87252.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 825

 Score =  236 bits (602), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 149/491 (30%), Positives = 235/491 (47%), Gaps = 16/491 (3%)

Query: 63  FGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGN 122
           FG M      P   ++N L  A  K        +   ++   GL PD  T N L+     
Sbjct: 78  FGAMLKSGAPPNRCTYNTLINAHCKLALLADARAALVRMREAGLAPDTFTYNCLM----- 132

Query: 123 KERGLCVENRIKEATWLFKNMIA-FGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSG 181
              GLC    +  A  LF  M   +G   D  +Y  LI G C  G +  A R+  KM  G
Sbjct: 133 --LGLCRAGLLAAACGLFVQMPRRWGACYDRYSYTILIKGLCAAGRIDDACRVFAKMSRG 190

Query: 182 DYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCA 241
                   +  + +Y++++D LCK   V +A+ L  EM  +G+ P VV    LI G C  
Sbjct: 191 ------WCRPGVHTYTVLLDGLCKVRRVGEAEALLGEMVNKGVVPNVVTYNALIGGLCQE 244

Query: 242 GNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTY 301
           G +++V  L  +M      P+  T+  ++  LCK GK+     +L   I +G+  +  TY
Sbjct: 245 GRFDDVTKLLEKMEIQRHSPDCWTYTQVVHGLCKHGKVGHGAKVLHEAIGKGVALEVLTY 304

Query: 302 NSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIIS 361
           N+L++GYC  G +  A ++   M        V ++N +I+G+C    V +AM+   Q+  
Sbjct: 305 NALINGYCKGGDMKAALDVLQLMKRNRVNPGVQTFNEVIHGFCCGGKVHKAMAFLTQMAG 364

Query: 362 NGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQE 421
            G+    +T+N+L+SG    G+   A +L D M+ Y V PD  TY I ID LC    ++E
Sbjct: 365 AGLSPNTVTFNSLISGQCSVGERKIALRLLDLMEEYGVLPDRQTYAIFIDALCDEGQLEE 424

Query: 422 AVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIH 481
           A  LF  L M   +    I+  L+ G C+ G +D+A+ L  K+  +  +P V TY+ +I 
Sbjct: 425 AHSLFSCLPMKGIKAHNVIYTSLVHGYCQVGDIDSAFGLMEKMASENCMPDVHTYNTLID 484

Query: 482 GLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNL 541
           GLC+  +L++A D L  M+K G  P   TFN L+   L + K +   ++  +M       
Sbjct: 485 GLCKVKRLDRAIDLLDKMKKQGIEPTTCTFNILIKQMLWDKKHADAAKMYEQMISS--GC 542

Query: 542 VPDDTTFSIVV 552
            PD  T+++ +
Sbjct: 543 KPDKQTYTLKI 553



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 138/598 (23%), Positives = 232/598 (38%), Gaps = 107/598 (17%)

Query: 53  IINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLT 112
           +  + EA    G M +    P + ++N L G + +   +D V     K+      PD  T
Sbjct: 209 VRRVGEAEALLGEMVNKGVVPNVVTYNALIGGLCQEGRFDDVTKLLEKMEIQRHSPDCWT 268

Query: 113 LNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVAL 172
              +++       GLC   ++     +    I  GV  +V+TY  LING+C+ G++  AL
Sbjct: 269 YTQVVH-------GLCKHGKVGHGAKVLHEAIGKGVALEVLTYNALINGYCKGGDMKAAL 321

Query: 173 RLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCT 232
            + + M       G      + +++ +I   C  G V KA     +M G G++P  V   
Sbjct: 322 DVLQLMKRNRVNPG------VQTFNEVIHGFCCGGKVHKAMAFLTQMAGAGLSPNTVTFN 375

Query: 233 TLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQR 292
           +LI G C  G  +    L   M + G  P+  T+ + ID LC  G++ EA+ L   +  +
Sbjct: 376 SLISGQCSVGERKIALRLLDLMEEYGVLPDRQTYAIFIDALCDEGQLEEAHSLFSCLPMK 435

Query: 293 GLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVE-- 350
           G+      Y SL+ GYC VG ID+A  +   M S+ C   V +YN LI+G CK+  ++  
Sbjct: 436 GIKAHNVIYTSLVHGYCQVGDIDSAFGLMEKMASENCMPDVHTYNTLIDGLCKVKRLDRA 495

Query: 351 ---------------------------------EAMSLYRQIISNGVR---QT------- 367
                                            +A  +Y Q+IS+G +   QT       
Sbjct: 496 IDLLDKMKKQGIEPTTCTFNILIKQMLWDKKHADAAKMYEQMISSGCKPDKQTYTLKIST 555

Query: 368 ---------------------------VITYNTLLSGLFQAGQAGYAQKLFDEMKLYNV- 399
                                      V TYN ++     AG    A   F  +K+ +V 
Sbjct: 556 DWFEGATKEENIDMAVVEMHEAGVFPDVETYNAIIKAYVDAGLKEKA--FFAHVKMLSVP 613

Query: 400 -EPDLSTYNILIDGLCKNNC--------------VQEAVKLFHMLEMNKFEFGIEIFNCL 444
            +PD +TY+IL++ +C  +               V+   +LF  +  +    GI  +  L
Sbjct: 614 IDPDCTTYSILLNYMCNKDDSDAFDNEKIWKMVDVRNLQELFEQMCESDAAPGISTYKAL 673

Query: 445 IDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGC 504
           + GLC   RL+    L  K+    ++        ++   C      +A +    M     
Sbjct: 674 LRGLCNQCRLEEVEWLLLKMQGNSILLDEDMSDYLLGCYCNLEMYREACEQFRSMAHQSF 733

Query: 505 APNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYH 562
            P + +   L+ G   +      V +   M     N   D+  + +++D L   EK H
Sbjct: 734 QPGLKSCCLLLSGLCDSGDHGMAVSIFSDMLGLGYNY--DEVVWKLLIDCL--HEKGH 787



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 121/497 (24%), Positives = 212/497 (42%), Gaps = 32/497 (6%)

Query: 36  SPETQ-LNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAV 94
           +P  Q  NE +H  C  G   +++A  F   M     SP   +FN L             
Sbjct: 333 NPGVQTFNEVIHGFCCGG--KVHKAMAFLTQMAGAGLSPNTVTFNSLISGQCSVGERKIA 390

Query: 95  ISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVIT 154
           +     +   G+LPD  T  I I+        LC E +++EA  LF  +   G++   + 
Sbjct: 391 LRLLDLMEEYGVLPDRQTYAIFID-------ALCDEGQLEEAHSLFSCLPMKGIKAHNVI 443

Query: 155 YGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKE 214
           Y +L++G+C+ G++  A  L +KM S   EN +    ++ +Y+ +ID LCK   +D+A +
Sbjct: 444 YTSLVHGYCQVGDIDSAFGLMEKMAS---ENCM---PDVHTYNTLIDGLCKVKRLDRAID 497

Query: 215 LFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLC 274
           L  +MK +GI P       LI          +   ++ +M+  G +P+  T+ + I    
Sbjct: 498 LLDKMKKQGIEPTTCTFNILIKQMLWDKKHADAAKMYEQMISSGCKPDKQTYTLKISTDW 557

Query: 275 KGGKINEANGLLEL--MIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHT 332
             G   E N  + +  M + G+ PD  TYN+++  Y   G  + A    + M S      
Sbjct: 558 FEGATKEENIDMAVVEMHEAGVFPDVETYNAIIKAYVDAGLKEKAFFAHVKMLSVPIDPD 617

Query: 333 VVSYNILINGYC--------------KILNVEEAMSLYRQIISNGVRQTVITYNTLLSGL 378
             +Y+IL+N  C              K+++V     L+ Q+  +     + TY  LL GL
Sbjct: 618 CTTYSILLNYMCNKDDSDAFDNEKIWKMVDVRNLQELFEQMCESDAAPGISTYKALLRGL 677

Query: 379 FQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGI 438
               +    + L  +M+  ++  D    + L+   C     +EA + F  +    F+ G+
Sbjct: 678 CNQCRLEEVEWLLLKMQGNSILLDEDMSDYLLGCYCNLEMYREACEQFRSMAHQSFQPGL 737

Query: 439 EIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLY 498
           +    L+ GLC +G    A  +F  +   G     V + ++I  L  KG      + L  
Sbjct: 738 KSCCLLLSGLCDSGDHGMAVSIFSDMLGLGYNYDEVVWKLLIDCLHEKGHAGACLEMLSV 797

Query: 499 MEKNGCAPNVVTFNTLM 515
           M+   C  +  T+ +L+
Sbjct: 798 MDAKKCVASTRTYASLV 814



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 68/209 (32%), Positives = 106/209 (50%), Gaps = 3/209 (1%)

Query: 353 MSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDG 412
           ++ +  ++ +G      TYNTL++   +      A+     M+   + PD  TYN L+ G
Sbjct: 75  LASFGAMLKSGAPPNRCTYNTLINAHCKLALLADARAALVRMREAGLAPDTFTYNCLMLG 134

Query: 413 LCKNNCVQEAVKLF-HMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVP 471
           LC+   +  A  LF  M       +    +  LI GLC AGR+D+A  +F K+ +    P
Sbjct: 135 LCRAGLLAAACGLFVQMPRRWGACYDRYSYTILIKGLCAAGRIDDACRVFAKMSRGWCRP 194

Query: 472 TVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELL 531
            V TY++++ GLC+  ++ +A   L  M   G  PNVVT+N L+ G  Q  +   V +LL
Sbjct: 195 GVHTYTVLLDGLCKVRRVGEAEALLGEMVNKGVVPNVVTYNALIGGLCQEGRFDDVTKLL 254

Query: 532 HKMAEPERNLVPDDTTFSIVVDLLAKDEK 560
            KM E +R+  PD  T++ VV  L K  K
Sbjct: 255 EKM-EIQRH-SPDCWTYTQVVHGLCKHGK 281


>gi|222629097|gb|EEE61229.1| hypothetical protein OsJ_15269 [Oryza sativa Japonica Group]
          Length = 855

 Score =  236 bits (602), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 161/552 (29%), Positives = 265/552 (48%), Gaps = 67/552 (12%)

Query: 41  LNEFLHENCKSGIINLNEARYFFGY-----MTHMQPSPPISSFNLLFGAVAKNRHYDAVI 95
            N  +H  C       NE  Y + Y     MT     P    +N+  G++          
Sbjct: 180 FNSLVHSYC-------NEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQE------ 226

Query: 96  SFYRKLVSIGLLPDFLTLN-------ILINCFGNK------ERGLCVENRIKEATWLFKN 142
               KL S    PD L L        +  NC  NK       R LC   +  +A  L K 
Sbjct: 227 ----KLPS----PDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKE 278

Query: 143 MIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKT-NIFSYSIIID 201
           M+  G  PD  TY  +I   C    +  A  L ++M        ++  T ++++Y+I+ID
Sbjct: 279 MMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEM-------KMVGVTPDVYTYTILID 331

Query: 202 SLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRP 261
           S CK GL+++A+ LF EM+  G +P VV  T LIH +  A    + N +F  M+D G RP
Sbjct: 332 SFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRP 391

Query: 262 NLLTFNVMIDCLCKGGKINEANGLLELMI----------------QRGLNPDRFTYNSLM 305
           N +T+  ++D LCK G I++A  +   +I                +  L P+  TY +L+
Sbjct: 392 NDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALV 451

Query: 306 DGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVR 365
           DG C   ++D A E+  +M S GC+   + Y+ LI+G+CK   ++ A  ++ Q+   G  
Sbjct: 452 DGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYL 511

Query: 366 QTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKL 425
            +V TY +L+  +F+ G+   A K+  +M   +  P++ TY  +IDGLC+    ++A+KL
Sbjct: 512 PSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKL 571

Query: 426 FHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCR 485
             ++E       +  +  LIDGL KAG++D + +LF ++ +KG  P  VTY ++I+ LC 
Sbjct: 572 LSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCA 631

Query: 486 KGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDD 545
            G L+KA   L  M++      +  +   + GF ++   S  + +L +M       VP  
Sbjct: 632 AGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIAS--LGILEEM--ESYGTVPIA 687

Query: 546 TTFSIVVDLLAK 557
             + +++D  +K
Sbjct: 688 PVYGMLIDCFSK 699



 Score =  212 bits (539), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 145/527 (27%), Positives = 242/527 (45%), Gaps = 62/527 (11%)

Query: 81  LFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKER--------------- 125
           +   + +  ++D  +SF  ++     +P+ +T   L++ F  K++               
Sbjct: 113 MISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEG 172

Query: 126 -------------GLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGN----- 167
                          C E     A  L   M   G  P  + Y   I   C         
Sbjct: 173 CNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPD 232

Query: 168 -LSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINP 226
            L +A +++ +M++    N +++K N+ +++     LC  G  DKA +L  EM  +G  P
Sbjct: 233 LLDLAEKIYGEMLAA---NCVLNKVNVANFA---RCLCGVGKFDKAFQLIKEMMRKGFVP 286

Query: 227 AVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLL 286
                + +I   C A   E+   LF EM  +G  P++ T+ ++ID  CK G I +A  L 
Sbjct: 287 DTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLF 346

Query: 287 ELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKI 346
           E M   G +P   TY +L+  Y    ++  A +IF  M   GC+   V+Y  L++G CK 
Sbjct: 347 EEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKA 406

Query: 347 LNVEEAMSLYRQIISNG----------------VRQTVITYNTLLSGLFQAGQAGYAQKL 390
            N+ +A  +Y ++I                   +   V+TY  L+ GL +A +  +A +L
Sbjct: 407 GNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHEL 466

Query: 391 FDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEF--GIEIFNCLIDGL 448
            D M     EP+   Y+ LIDG CK   +  A ++F  L+M K  +   +  +  LID +
Sbjct: 467 LDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVF--LQMTKCGYLPSVHTYTSLIDRM 524

Query: 449 CKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNV 508
            K GRLD A ++  ++ +    P VVTY+ MI GLCR G+ EKA   L  ME+ GC+PNV
Sbjct: 525 FKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNV 584

Query: 509 VTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLL 555
           VT+  L+ G  +  K    ++L  +M+   +   P+  T+ ++++ L
Sbjct: 585 VTYTALIDGLGKAGKIDLSLDLFTQMS--RKGCSPNYVTYRVLINHL 629



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 135/486 (27%), Positives = 231/486 (47%), Gaps = 53/486 (10%)

Query: 126 GLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGD--- 182
           GL   +   EA      M      P+V+TY TL++GF +   L    R+   M++     
Sbjct: 116 GLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNP 175

Query: 183 -------------------YENGLISKTNI-------FSYSIIIDSLCKE------GLVD 210
                              Y   L+++            Y+I I S+C +       L+D
Sbjct: 176 NPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLD 235

Query: 211 KAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMI 270
            A++++ EM         V         C  G +++   L  EM+  G  P+  T++ +I
Sbjct: 236 LAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVI 295

Query: 271 DCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCK 330
             LC   K+ +A  L + M   G+ PD +TY  L+D +C  G I+ A+ +F  M S GC 
Sbjct: 296 TFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCS 355

Query: 331 HTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKL 390
            TVV+Y  LI+ Y K   V +A  ++ +++  G R   +TY  L+ GL +AG    A ++
Sbjct: 356 PTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEV 415

Query: 391 FDEM----------------KLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKF 434
           + ++                  + + P++ TY  L+DGLCK + V  A +L   +  +  
Sbjct: 416 YAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGC 475

Query: 435 EFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKAND 494
           E    +++ LIDG CKAG++D+A E+F ++ + G +P+V TY+ +I  + + G+L+ A  
Sbjct: 476 EPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMK 535

Query: 495 FLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDL 554
            L  M K+ C PNVVT+  ++ G  +  ++ K ++LL  M   E+   P+  T++ ++D 
Sbjct: 536 VLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLM--EEKGCSPNVVTYTALIDG 593

Query: 555 LAKDEK 560
           L K  K
Sbjct: 594 LGKAGK 599



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 124/483 (25%), Positives = 223/483 (46%), Gaps = 52/483 (10%)

Query: 55  NLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLN 114
            + +A   F  M  +  +P + ++ +L  +  K    +     + ++ S+G  P  +T  
Sbjct: 303 KVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYT 362

Query: 115 ILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRL 174
            LI+ +   ++       + +A  +F  M+  G RP+ +TYG L++G C+ GN+S A  +
Sbjct: 363 ALIHAYLKAKQ-------VPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEV 415

Query: 175 HKKMV----SGDY------ENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGI 224
           + K++    S D       E+      N+ +Y  ++D LCK   VD A EL   M   G 
Sbjct: 416 YAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGC 475

Query: 225 NPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANG 284
            P  +V   LI GFC AG  +    +F++M   G  P++ T+  +ID + K G+++ A  
Sbjct: 476 EPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMK 535

Query: 285 LLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYC 344
           +L  M++    P+  TY +++DG C +G  + A ++   M  KGC   VV+Y  LI+G  
Sbjct: 536 VLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLG 595

Query: 345 KILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLS 404
           K   ++ ++ L+ Q+   G     +TY  L++ L  AG    A+ L  EMK       L 
Sbjct: 596 KAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQ 655

Query: 405 TYNILIDGLCKN---------------------------NCVQEAVKLFHMLEMNKFEFG 437
            Y   I G  K+                           +C  +A +L   +E++K    
Sbjct: 656 GYRCAIQGFSKSFIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMME 715

Query: 438 I--------EIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKL 489
           +        +++  LI  LC A +++ A+ L+ ++ ++G VP +  +  +I GL    K 
Sbjct: 716 VPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKW 775

Query: 490 EKA 492
           ++A
Sbjct: 776 DEA 778



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 117/437 (26%), Positives = 189/437 (43%), Gaps = 33/437 (7%)

Query: 146 FGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCK 205
           FG RP  +TY  L+      G + +  R+ K+M     E+G     + F+      +LCK
Sbjct: 34  FGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMS----ESGFC--MDRFTVGCFAHALCK 87

Query: 206 EGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLT 265
           EG    A ++   ++        V+CT +I G   A  ++E       M      PN++T
Sbjct: 88  EGRWADALDM---IEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVT 144

Query: 266 FNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMH 325
           +  ++    K  ++     ++ +M+  G NP+   +NSL+  YC       A ++   M 
Sbjct: 145 YRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMT 204

Query: 326 SKGCKHTVVSYNILINGYC--------KILNVEEAMSLYRQIISNGVRQTVITYNTLLSG 377
           + GC    V YNI I   C         +L++ E   +Y ++++       +        
Sbjct: 205 TCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAE--KIYGEMLAANCVLNKVNVANFARC 262

Query: 378 LFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFG 437
           L   G+   A +L  EM      PD STY+ +I  LC    V++A  LF  ++M      
Sbjct: 263 LCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPD 322

Query: 438 IEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLL 497
           +  +  LID  CKAG ++ A  LF ++   G  PTVVTY+ +IH   +  ++ +AND   
Sbjct: 323 VYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFH 382

Query: 498 YMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKM--------------AEPERNLVP 543
            M   GC PN VT+  L+ G  +    SK  E+  K+               E    L P
Sbjct: 383 RMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAP 442

Query: 544 DDTTFSIVVDLLAKDEK 560
           +  T+  +VD L K  K
Sbjct: 443 NVVTYGALVDGLCKAHK 459



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 95/385 (24%), Positives = 157/385 (40%), Gaps = 95/385 (24%)

Query: 256 DLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRID 315
           D G RP+ +T+N ++  L   G+++    + + M + G   DRFT        C  GR  
Sbjct: 33  DFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGRWA 92

Query: 316 TA-----REIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVIT 370
            A     RE F  + +  C H       +I+G  +    +EAMS   ++  N     V+T
Sbjct: 93  DALDMIEREDF-KLDTVLCTH-------MISGLMEASYFDEAMSFLHRMRCNSCIPNVVT 144

Query: 371 YNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNN------------- 417
           Y TLLSG  +  Q G+ +++ + M      P+ S +N L+   C                
Sbjct: 145 YRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMT 204

Query: 418 ------------------CVQEAVKLFHMLEMNKFEFG-IEIFNCLIDG---------LC 449
                             C QE +    +L++ +  +G +   NC+++          LC
Sbjct: 205 TCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLC 264

Query: 450 KAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKN------- 502
             G+ D A++L  ++ +KG VP   TYS +I  LC   K+EKA  FLL+ E         
Sbjct: 265 GVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKA--FLLFQEMKMVGVTPD 322

Query: 503 ------------------------------GCAPNVVTFNTLMHGFLQNNKTSKVVELLH 532
                                         GC+P VVT+  L+H +L+  +  +  ++ H
Sbjct: 323 VYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFH 382

Query: 533 KMAEPERNLVPDDTTFSIVVDLLAK 557
           +M +      P+D T+  +VD L K
Sbjct: 383 RMVDA--GCRPNDVTYGALVDGLCK 405


>gi|15236546|ref|NP_194913.1| proton gradient regulation 3 [Arabidopsis thaliana]
 gi|75213543|sp|Q9SZ52.1|PP344_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g31850, chloroplastic; AltName: Full=Protein PROTON
           GRADIENT REGULATION 3; Flags: Precursor
 gi|4584524|emb|CAB40755.1| putative protein [Arabidopsis thaliana]
 gi|7270088|emb|CAB79903.1| putative protein [Arabidopsis thaliana]
 gi|332660567|gb|AEE85967.1| proton gradient regulation 3 [Arabidopsis thaliana]
          Length = 1112

 Score =  236 bits (602), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 149/487 (30%), Positives = 255/487 (52%), Gaps = 15/487 (3%)

Query: 77  SFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEA 136
           S+N L   + K+R     +  YR+++  G  P   T + L+   G +         I   
Sbjct: 190 SYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRD-------IDSV 242

Query: 137 TWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSY 196
             L K M   G++P+V T+   I    R G ++ A  + K+M   D E       ++ +Y
Sbjct: 243 MGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRM---DDEG---CGPDVVTY 296

Query: 197 SIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLD 256
           +++ID+LC    +D AKE+F +MK     P  V   TL+  F    + + V   + EM  
Sbjct: 297 TVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEK 356

Query: 257 LGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDT 316
            G  P+++TF +++D LCK G   EA   L++M  +G+ P+  TYN+L+ G   V R+D 
Sbjct: 357 DGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDD 416

Query: 317 AREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLS 376
           A E+F +M S G K T  +Y + I+ Y K  +   A+  + ++ + G+   ++  N  L 
Sbjct: 417 ALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLY 476

Query: 377 GLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEF 436
            L +AG+   A+++F  +K   + PD  TYN+++    K   + EA+KL   +  N  E 
Sbjct: 477 SLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEP 536

Query: 437 GIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFL 496
            + + N LI+ L KA R+D AW++F ++ +  L PTVVTY+ ++ GL + GK+++A +  
Sbjct: 537 DVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELF 596

Query: 497 LYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLA 556
             M + GC PN +TFNTL     +N++ +  +++L KM   +   VPD  T++ ++  L 
Sbjct: 597 EGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMM--DMGCVPDVFTYNTIIFGLV 654

Query: 557 KDEKYHE 563
           K+ +  E
Sbjct: 655 KNGQVKE 661



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 164/601 (27%), Positives = 261/601 (43%), Gaps = 94/601 (15%)

Query: 56  LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNI 115
           L+ A+  F  M   +  P   ++  L    + NR  D+V  F+ ++   G +PD +T  I
Sbjct: 309 LDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTI 368

Query: 116 LINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLH 175
           L++        LC      EA      M   G+ P++ TY TLI G  R   L  AL L 
Sbjct: 369 LVD-------ALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELF 421

Query: 176 KKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLI 235
             M S      L  K   ++Y + ID   K G    A E F +MK +GI P +V C   +
Sbjct: 422 GNMES------LGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASL 475

Query: 236 HGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLN 295
           +    AG   E   +F  + D+G  P+ +T+N+M+ C  K G+I+EA  LL  M++ G  
Sbjct: 476 YSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCE 535

Query: 296 PDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSL 355
           PD    NSL++      R+D A ++F+ M     K TVV+YN L+ G  K   ++EA+ L
Sbjct: 536 PDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIEL 595

Query: 356 YRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCK 415
           +  ++  G     IT+NTL   L +  +   A K+  +M      PD+ TYN +I GL K
Sbjct: 596 FEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVK 655

Query: 416 NNCVQEAVKLFHMLEMNKFEFGIEIFNC-LIDGLCKAGRLDNA----------------- 457
           N  V+EA+  FH  +M K  +   +  C L+ G+ KA  +++A                 
Sbjct: 656 NGQVKEAMCFFH--QMKKLVYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPAN 713

Query: 458 --WE-LFHKLPQKGLVPTVVTYS--IMIHGLCRKGK------------------------ 488
             WE L   +  +  +   V++S  ++ +G+CR G                         
Sbjct: 714 LFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFE 773

Query: 489 ---------------------------LEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQN 521
                                      +E A D  L ++  GC P+V T+N L+  + ++
Sbjct: 774 KFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKS 833

Query: 522 NKTSKVVELLHKMA--EPERNLVPDDTTFSIVVDLLAKDEK---YHECSAVSKSSYRACL 576
            K  ++ EL  +M+  E E N +  +   S +V     D+    Y++  +    S  AC 
Sbjct: 834 GKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACT 893

Query: 577 Y 577
           Y
Sbjct: 894 Y 894



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 153/580 (26%), Positives = 270/580 (46%), Gaps = 60/580 (10%)

Query: 49   CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
            C S +  ++EA      M      P +   N L   + K    D     + ++  + L P
Sbjct: 512  CYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKP 571

Query: 109  DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
              +T N L+        GL    +I+EA  LF+ M+  G  P+ IT+ TL +  C+   +
Sbjct: 572  TVVTYNTLL-------AGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEV 624

Query: 169  SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
            ++AL++  KM+    + G +   ++F+Y+ II  L K G V +A   F +MK + + P  
Sbjct: 625  TLALKMLFKMM----DMGCVP--DVFTYNTIIFGLVKNGQVKEAMCFFHQMK-KLVYPDF 677

Query: 229  VVCTTLIHG------------------FCCAGN-----WEEVNGLFIEMLDLGPRPNLLT 265
            V   TL+ G                  + CA       WE++ G    +L      N ++
Sbjct: 678  VTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIG---SILAEAGIDNAVS 734

Query: 266  FN-----------------VMIDCLCKGGKINEANGLLELMIQR-GLNPDRFTYNSLMDG 307
            F+                  +I   CK   ++ A  L E   +  G+ P   TYN L+ G
Sbjct: 735  FSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGG 794

Query: 308  YCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQT 367
                  I+ A+++FL + S GC   V +YN L++ Y K   ++E   LY+++ ++     
Sbjct: 795  LLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEAN 854

Query: 368  VITYNTLLSGLFQAGQAGYAQKLF-DEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLF 426
             IT+N ++SGL +AG    A  L+ D M   +  P   TY  LIDGL K+  + EA +LF
Sbjct: 855  TITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLF 914

Query: 427  HMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRK 486
              +          I+N LI+G  KAG  D A  LF ++ ++G+ P + TYS+++  LC  
Sbjct: 915  EGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMV 974

Query: 487  GKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDT 546
            G++++   +   ++++G  P+VV +N +++G  ++++  + + L ++M +  R + PD  
Sbjct: 975  GRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEM-KTSRGITPDLY 1033

Query: 547  TFSIVVDLLAKDEKYHECSAVSKSSYRACLYVTIFQPSSL 586
            T++ ++  L       E   +     RA L   +F  ++L
Sbjct: 1034 TYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNAL 1073



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 133/484 (27%), Positives = 233/484 (48%), Gaps = 44/484 (9%)

Query: 66   MTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTL------------ 113
            M  M   P + ++N +   + KN      + F+ ++  + + PDF+TL            
Sbjct: 634  MMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKL-VYPDFVTLCTLLPGVVKASL 692

Query: 114  ---------NILINCFGNKERGLCVENRIKE--ATWLFKNMIAFGVRPDVITYGTLINGF 162
                     N L NC  ++   L  E+ I    A     N ++F  R        + NG 
Sbjct: 693  IEDAYKIITNFLYNC-ADQPANLFWEDLIGSILAEAGIDNAVSFSER-------LVANGI 744

Query: 163  CRTGN--LSVALRLHKKM--VSG------DYENGLISKTNIFSYSIIIDSLCKEGLVDKA 212
            CR G+  L   +R   K   VSG       +   L  +  + +Y+++I  L +  +++ A
Sbjct: 745  CRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIA 804

Query: 213  KELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDC 272
            +++FL++K  G  P V     L+  +  +G  +E+  L+ EM       N +T N++I  
Sbjct: 805  QDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISG 864

Query: 273  LCKGGKINEANGLL-ELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKH 331
            L K G +++A  L  +LM  R  +P   TY  L+DG    GR+  A+++F  M   GC+ 
Sbjct: 865  LVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRP 924

Query: 332  TVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLF 391
                YNILING+ K    + A +L+++++  GVR  + TY+ L+  L   G+       F
Sbjct: 925  NCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYF 984

Query: 392  DEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNK-FEFGIEIFNCLIDGLCK 450
             E+K   + PD+  YN++I+GL K++ ++EA+ LF+ ++ ++     +  +N LI  L  
Sbjct: 985  KELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGI 1044

Query: 451  AGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVT 510
            AG ++ A ++++++ + GL P V T++ +I G    GK E A      M   G +PN  T
Sbjct: 1045 AGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGT 1104

Query: 511  FNTL 514
            +  L
Sbjct: 1105 YEQL 1108



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 119/497 (23%), Positives = 213/497 (42%), Gaps = 51/497 (10%)

Query: 62  FFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLV-SIGLLPDFLTLNILINCF 120
           F G M      P +SS   +   +      D+  S+++ +  ++ L+    T N ++   
Sbjct: 69  FSGSMIRKSSKPDLSSSEEVTRGLKSFPDTDSSFSYFKSVAGNLNLVHTTETCNYML--- 125

Query: 121 GNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVS 180
                 L V+ +++E  ++F  M    ++ D  TY T+       G L  A    +KM  
Sbjct: 126 ----EALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKM-- 179

Query: 181 GDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCC 240
              E G +   N +SY+ +I  L K     +A E++  M              ++ GF  
Sbjct: 180 --REFGFV--LNAYSYNGLIHLLLKSRFCTEAMEVYRRM--------------ILEGF-- 219

Query: 241 AGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFT 300
                              RP+L T++ ++  L K   I+   GLL+ M   GL P+ +T
Sbjct: 220 -------------------RPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYT 260

Query: 301 YNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQII 360
           +   +      G+I+ A EI   M  +GC   VV+Y +LI+  C    ++ A  ++ ++ 
Sbjct: 261 FTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMK 320

Query: 361 SNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQ 420
           +   +   +TY TLL            ++ + EM+     PD+ T+ IL+D LCK     
Sbjct: 321 TGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFG 380

Query: 421 EAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMI 480
           EA     ++        +  +N LI GL +  RLD+A ELF  +   G+ PT  TY + I
Sbjct: 381 EAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFI 440

Query: 481 HGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERN 540
               + G    A +    M+  G APN+V  N  ++   +  +  +  ++ + + +    
Sbjct: 441 DYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDI--G 498

Query: 541 LVPDDTTFSIVVDLLAK 557
           LVPD  T+++++   +K
Sbjct: 499 LVPDSVTYNMMMKCYSK 515



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 87/299 (29%), Positives = 142/299 (47%), Gaps = 36/299 (12%)

Query: 73   PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILIN-------------- 118
            P ++++N L  A  K+   D +   Y+++ +     + +T NI+I+              
Sbjct: 818  PDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDL 877

Query: 119  ---------------CFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFC 163
                            +G    GL    R+ EA  LF+ M+ +G RP+   Y  LINGF 
Sbjct: 878  YYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFG 937

Query: 164  RTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRG 223
            + G    A  L K+MV    + G+  + ++ +YS+++D LC  G VD+    F E+K  G
Sbjct: 938  KAGEADAACALFKRMV----KEGV--RPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESG 991

Query: 224  INPAVVVCTTLIHGFCCAGNWEEVNGLFIEM-LDLGPRPNLLTFNVMIDCLCKGGKINEA 282
            +NP VV    +I+G   +   EE   LF EM    G  P+L T+N +I  L   G + EA
Sbjct: 992  LNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEA 1051

Query: 283  NGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILIN 341
              +   + + GL P+ FT+N+L+ GY L G+ + A  ++ +M + G      +Y  L N
Sbjct: 1052 GKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQLPN 1110


>gi|297796945|ref|XP_002866357.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297312192|gb|EFH42616.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 907

 Score =  236 bits (602), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 157/562 (27%), Positives = 274/562 (48%), Gaps = 62/562 (11%)

Query: 27  SPRQIAAVSSPETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVA 86
           SP + AAVSS    L E L +  K     + EA      +     SP I  +N L  ++ 
Sbjct: 329 SPSE-AAVSS----LVEGLRKRGK-----VEEALNLVKRVAEFGVSPNIFVYNALIDSLC 378

Query: 87  KNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAF 146
           K R++D     + ++  IGL P+ +T +ILI+ F       C   ++  A      MI  
Sbjct: 379 KGRNFDEAELLFDRMGKIGLCPNDVTYSILIDMF-------CRRGKLDTALSFLGEMIDM 431

Query: 147 GVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKE 206
           G++P V  Y +LING C+ G++S A  L  +M++   E        + +Y+ ++   C +
Sbjct: 432 GLKPSVYPYNSLINGHCKFGDISAAESLMAEMINKKLE------PTVVTYTSLMGGYCSK 485

Query: 207 GLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTF 266
           G ++KA  L+ EM G+GI P++   TTL+ G   AG   +   LF EM +   +PN +T+
Sbjct: 486 GKINKALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWNVKPNRVTY 545

Query: 267 NVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHS 326
           NVMI+  C+ G +++A   L  MI++G+ PD ++Y  L+ G CL G+   A+     +H 
Sbjct: 546 NVMIEGYCEEGNMSKAFEFLNEMIEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHK 605

Query: 327 KGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGY 386
             C+   + Y  L++G+C+   +EEA+S+ + +   GV   ++ Y  L+ G  +      
Sbjct: 606 GNCELNEICYTGLLHGFCREGKLEEALSVCQDMGLRGVDLDLVCYGVLIDGSLKHKDRKV 665

Query: 387 AQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEI-FNCLI 445
              L  EM    ++PD   Y  +ID   K    +EA  ++ ++ +N+     E+ +  +I
Sbjct: 666 FLGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLM-INEGCVPNEVTYTAVI 724

Query: 446 DGLCKAGRLDNAWEL-----------------------------------FHKLPQKGLV 470
           +GLCKAG ++ A  L                                    H    KGL+
Sbjct: 725 NGLCKAGFVNEAEILCSKMRPGNSVPNQVTYGCFLDILTKGVGDMKKAVELHNAILKGLL 784

Query: 471 PTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVEL 530
               TY+++I G CR+G++E+A++ +  M  +G +P+ +T+ T++    + N   K +EL
Sbjct: 785 ANTATYNMLIRGFCRQGRMEEASELITRMIGDGVSPDCITYTTMISELCRRNDVKKAIEL 844

Query: 531 LHKMAEPERNLVPDDTTFSIVV 552
            + M   E+ + PD   ++ ++
Sbjct: 845 WNSMT--EKGIRPDRVAYNTLI 864



 Score =  235 bits (599), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 150/533 (28%), Positives = 257/533 (48%), Gaps = 50/533 (9%)

Query: 66  MTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPD---------------- 109
           MT +   P + + + L   + K RH+   +  +  ++++G+ PD                
Sbjct: 183 MTKVSLLPEVRTLSALLHGLVKFRHFGLAMELFDDMINVGIRPDVYIYTGVIRSLCELKD 242

Query: 110 -------------------FLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRP 150
                               +  N+LI+       GLC + ++ EA  + K++    ++P
Sbjct: 243 LSRAKEMIVQMEATGCDVNIVPYNVLID-------GLCKKQKVWEAVGIKKDLAGKELKP 295

Query: 151 DVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVD 210
           DV+TY TL+ G C+     V L +  +M+       L    +  + S +++ L K G V+
Sbjct: 296 DVVTYCTLVCGLCKVQEFEVGLEMIDEMLR------LRFSPSEAAVSSLVEGLRKRGKVE 349

Query: 211 KAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMI 270
           +A  L   +   G++P + V   LI   C   N++E   LF  M  +G  PN +T++++I
Sbjct: 350 EALNLVKRVAEFGVSPNIFVYNALIDSLCKGRNFDEAELLFDRMGKIGLCPNDVTYSILI 409

Query: 271 DCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCK 330
           D  C+ GK++ A   L  MI  GL P  + YNSL++G+C  G I  A  +   M +K  +
Sbjct: 410 DMFCRRGKLDTALSFLGEMIDMGLKPSVYPYNSLINGHCKFGDISAAESLMAEMINKKLE 469

Query: 331 HTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKL 390
            TVV+Y  L+ GYC    + +A+ LY ++   G+  ++ T+ TLLSGLF+AG    A KL
Sbjct: 470 PTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKL 529

Query: 391 FDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCK 450
           F EM  +NV+P+  TYN++I+G C+   + +A +  + +           +  LI GLC 
Sbjct: 530 FTEMAEWNVKPNRVTYNVMIEGYCEEGNMSKAFEFLNEMIEKGIVPDTYSYRPLIHGLCL 589

Query: 451 AGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVT 510
            G+   A      L +       + Y+ ++HG CR+GKLE+A      M   G   ++V 
Sbjct: 590 TGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQDMGLRGVDLDLVC 649

Query: 511 FNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
           +  L+ G L++      + LL +M   +R L PDD  ++ ++D  +K   + E
Sbjct: 650 YGVLIDGSLKHKDRKVFLGLLKEMH--DRGLKPDDVIYTSMIDAKSKTGDFKE 700



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 142/460 (30%), Positives = 236/460 (51%), Gaps = 17/460 (3%)

Query: 78  FNLLFGAVAKNRHY-DAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEA 136
           F+LL     ++R   D V+ F   +  + LLP+  TL+ L++       GL        A
Sbjct: 159 FDLLIQHYVRSRRVLDGVLVFKMMMTKVSLLPEVRTLSALLH-------GLVKFRHFGLA 211

Query: 137 TWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSY 196
             LF +MI  G+RPDV  Y  +I   C   +LS A    K+M+      G     NI  Y
Sbjct: 212 MELFDDMINVGIRPDVYIYTGVIRSLCELKDLSRA----KEMIVQMEATG--CDVNIVPY 265

Query: 197 SIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLD 256
           +++ID LCK+  V +A  +  ++ G+ + P VV   TL+ G C    +E    +  EML 
Sbjct: 266 NVLIDGLCKKQKVWEAVGIKKDLAGKELKPDVVTYCTLVCGLCKVQEFEVGLEMIDEMLR 325

Query: 257 LGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDT 316
           L   P+    + +++ L K GK+ EA  L++ + + G++P+ F YN+L+D  C     D 
Sbjct: 326 LRFSPSEAAVSSLVEGLRKRGKVEEALNLVKRVAEFGVSPNIFVYNALIDSLCKGRNFDE 385

Query: 317 AREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLS 376
           A  +F  M   G     V+Y+ILI+ +C+   ++ A+S   ++I  G++ +V  YN+L++
Sbjct: 386 AELLFDRMGKIGLCPNDVTYSILIDMFCRRGKLDTALSFLGEMIDMGLKPSVYPYNSLIN 445

Query: 377 GLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEF 436
           G  + G    A+ L  EM    +EP + TY  L+ G C    + +A++L+H +       
Sbjct: 446 GHCKFGDISAAESLMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIVP 505

Query: 437 GIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFL 496
            I  F  L+ GL +AG + +A +LF ++ +  + P  VTY++MI G C +G + KA +FL
Sbjct: 506 SIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWNVKPNRVTYNVMIEGYCEEGNMSKAFEFL 565

Query: 497 LYMEKNGCAPNVVTFNTLMHGFLQNNKTSKV---VELLHK 533
             M + G  P+  ++  L+HG     + S+    V+ LHK
Sbjct: 566 NEMIEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHK 605



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 105/418 (25%), Positives = 207/418 (49%), Gaps = 9/418 (2%)

Query: 132 RIKEATWLFKNMIA-FGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISK 190
           R+ +   +FK M+    + P+V T   L++G  +  +  +A+ L   M++      +  +
Sbjct: 171 RVLDGVLVFKMMMTKVSLLPEVRTLSALLHGLVKFRHFGLAMELFDDMIN------VGIR 224

Query: 191 TNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGL 250
            +++ Y+ +I SLC+   + +AKE+ ++M+  G +  +V    LI G C      E  G+
Sbjct: 225 PDVYIYTGVIRSLCELKDLSRAKEMIVQMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGI 284

Query: 251 FIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCL 310
             ++     +P+++T+  ++  LCK  +      +++ M++   +P     +SL++G   
Sbjct: 285 KKDLAGKELKPDVVTYCTLVCGLCKVQEFEVGLEMIDEMLRLRFSPSEAAVSSLVEGLRK 344

Query: 311 VGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVIT 370
            G+++ A  +   +   G    +  YN LI+  CK  N +EA  L+ ++   G+    +T
Sbjct: 345 RGKVEEALNLVKRVAEFGVSPNIFVYNALIDSLCKGRNFDEAELLFDRMGKIGLCPNDVT 404

Query: 371 YNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLE 430
           Y+ L+    + G+   A     EM    ++P +  YN LI+G CK   +  A  L   + 
Sbjct: 405 YSILIDMFCRRGKLDTALSFLGEMIDMGLKPSVYPYNSLINGHCKFGDISAAESLMAEMI 464

Query: 431 MNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLE 490
             K E  +  +  L+ G C  G+++ A  L+H++  KG+VP++ T++ ++ GL R G + 
Sbjct: 465 NKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIR 524

Query: 491 KANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTF 548
            A      M +    PN VT+N ++ G+ +    SK  E L++M   E+ +VPD  ++
Sbjct: 525 DAVKLFTEMAEWNVKPNRVTYNVMIEGYCEEGNMSKAFEFLNEMI--EKGIVPDTYSY 580



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 107/468 (22%), Positives = 194/468 (41%), Gaps = 108/468 (23%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
           N  ++ +CK G  +++ A      M + +  P + ++  L G        +  +  Y ++
Sbjct: 441 NSLINGHCKFG--DISAAESLMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEM 498

Query: 102 VSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLING 161
              G++P   T   L++       GL     I++A  LF  M  + V+P+ +TY  +I G
Sbjct: 499 TGKGIVPSIYTFTTLLS-------GLFRAGLIRDAVKLFTEMAEWNVKPNRVTYNVMIEG 551

Query: 162 FCRTGNLSVALRL---------------HKKMVSGDYENGLISKTNIF------------ 194
           +C  GN+S A                  ++ ++ G    G  S+  +F            
Sbjct: 552 YCEEGNMSKAFEFLNEMIEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELN 611

Query: 195 --SYSIIIDSLCKEGLVDKA-------------------------------KELFL---- 217
              Y+ ++   C+EG +++A                               +++FL    
Sbjct: 612 EICYTGLLHGFCREGKLEEALSVCQDMGLRGVDLDLVCYGVLIDGSLKHKDRKVFLGLLK 671

Query: 218 EMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGG 277
           EM  RG+ P  V+ T++I      G+++E  G++  M++ G  PN +T+  +I+ LCK G
Sbjct: 672 EMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAG 731

Query: 278 KINEANGLLELM-----------------------------------IQRGLNPDRFTYN 302
            +NEA  L   M                                   I +GL  +  TYN
Sbjct: 732 FVNEAEILCSKMRPGNSVPNQVTYGCFLDILTKGVGDMKKAVELHNAILKGLLANTATYN 791

Query: 303 SLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISN 362
            L+ G+C  GR++ A E+   M   G     ++Y  +I+  C+  +V++A+ L+  +   
Sbjct: 792 MLIRGFCRQGRMEEASELITRMIGDGVSPDCITYTTMISELCRRNDVKKAIELWNSMTEK 851

Query: 363 GVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILI 410
           G+R   + YNTL+ G   AG+ G A +L +EM    ++P+  T    I
Sbjct: 852 GIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLKPNTETSETTI 899


>gi|115450929|ref|NP_001049065.1| Os03g0165100 [Oryza sativa Japonica Group]
 gi|113547536|dbj|BAF10979.1| Os03g0165100 [Oryza sativa Japonica Group]
          Length = 695

 Score =  236 bits (602), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 142/496 (28%), Positives = 262/496 (52%), Gaps = 15/496 (3%)

Query: 41  LNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRK 100
           LN  +H  CK+  +  ++       M      P + + N++  A  +    +A ++    
Sbjct: 98  LNIMVHNYCKA--LEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMALVDS 155

Query: 101 LVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLIN 160
           +VS GL P  +T N ++       +GLC      +A  +FK M  FGV PDV ++  LI 
Sbjct: 156 MVSKGLKPGIVTYNSVL-------KGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIG 208

Query: 161 GFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMK 220
           GFCR G +  AL+++K+M       G+  K ++ S+S +I    + G +D A     EM+
Sbjct: 209 GFCRVGEIEEALKIYKEM----RHRGI--KPDLVSFSCLIGLFARRGKMDHAMAYLREMR 262

Query: 221 GRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKIN 280
             G+ P  V+ T +I GFC AG   +   +  EM+  G  P+++T+N +++ LCK  ++ 
Sbjct: 263 CFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLL 322

Query: 281 EANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILI 340
           +A GLL  M +RG+ PD  T+ +L+ GYC+ G++D A ++F +M ++  +  +V+YN LI
Sbjct: 323 DAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLI 382

Query: 341 NGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVE 400
           +G C+  ++++A  L+  + S  +    +TY+ L+    + GQ   A    DEM    + 
Sbjct: 383 DGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGIL 442

Query: 401 PDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWEL 460
           P++ TYN +I G C++  V +  K    + +NK    +  +N LI G  K  ++ +A++L
Sbjct: 443 PNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKL 502

Query: 461 FHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQ 520
            + + ++ + P VVTY+++I+G    G +++A      M   G  P+  T+ ++++G + 
Sbjct: 503 LNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVT 562

Query: 521 NNKTSKVVELLHKMAE 536
              + +  +L  +M +
Sbjct: 563 AGNSKEAFQLHDEMLQ 578



 Score =  236 bits (602), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 144/456 (31%), Positives = 240/456 (52%), Gaps = 15/456 (3%)

Query: 98  YRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGT 157
           YR + S     +  TLNI+++ +       C      +   +   M    V PDV+T+  
Sbjct: 83  YRLVFSSNSEVNTYTLNIMVHNY-------CKALEFDKVDAVISEMEKRCVFPDVVTHNV 135

Query: 158 LINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFL 217
           +++   R G+   A+ L   MVS     GL  K  I +Y+ ++  LC+ G+ DKA E+F 
Sbjct: 136 MVDARFRAGDAEAAMALVDSMVS----KGL--KPGIVTYNSVLKGLCRSGMWDKAWEVFK 189

Query: 218 EMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGG 277
           EM   G+ P V   T LI GFC  G  EE   ++ EM   G +P+L++F+ +I    + G
Sbjct: 190 EMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRG 249

Query: 278 KINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYN 337
           K++ A   L  M   GL PD   Y  ++ G+C  G +  A  +   M   GC   VV+YN
Sbjct: 250 KMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYN 309

Query: 338 ILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLY 397
            L+NG CK   + +A  L  ++   GV   + T+ TL+ G    G+   A +LFD M   
Sbjct: 310 TLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQ 369

Query: 398 NVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNA 457
            + PD+ TYN LIDG+C+   + +A  L+  +   +       ++ LID  C+ G++++A
Sbjct: 370 RLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDA 429

Query: 458 WELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHG 517
           +    ++  KG++P ++TY+ +I G CR G + K   FL  M  N  +P+++T+NTL+HG
Sbjct: 430 FGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHG 489

Query: 518 FLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
           +++ +K     +LL+ M E E+ + PD  T++++++
Sbjct: 490 YIKEDKMHDAFKLLN-MMEKEK-VQPDVVTYNMLIN 523



 Score =  232 bits (592), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 140/477 (29%), Positives = 245/477 (51%), Gaps = 26/477 (5%)

Query: 3   SRTQFRCLFSSETVSKVKLSSLFKSPRQIAAVSSPETQL-----------NEFLHENCKS 51
           S  + RC+F       V + + F++    AA++  ++ +           N  L   C+S
Sbjct: 119 SEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRS 178

Query: 52  GIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFL 111
           G+   ++A   F  M     +P + SF +L G   +    +  +  Y+++   G+ PD +
Sbjct: 179 GM--WDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLV 236

Query: 112 TLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVA 171
           + + LI  F  +        ++  A    + M  FG+ PD + Y  +I GFCR G +S A
Sbjct: 237 SFSCLIGLFARR-------GKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDA 289

Query: 172 LRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVC 231
           LR+  +MV      G     ++ +Y+ +++ LCKE  +  A+ L  EM+ RG+ P +   
Sbjct: 290 LRVRDEMV------GCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTF 343

Query: 232 TTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQ 291
           TTLIHG+C  G  ++   LF  ML+   RP+++T+N +ID +C+ G +++AN L + M  
Sbjct: 344 TTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHS 403

Query: 292 RGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEE 351
           R + P+  TY+ L+D +C  G+++ A      M +KG    +++YN +I GYC+  NV +
Sbjct: 404 REIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSK 463

Query: 352 AMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILID 411
                ++++ N V   +ITYNTL+ G  +  +   A KL + M+   V+PD+ TYN+LI+
Sbjct: 464 GQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLIN 523

Query: 412 GLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKG 468
           G   +  VQEA  +F  +     E     +  +I+G   AG    A++L  ++ Q+G
Sbjct: 524 GFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRG 580



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 87/334 (26%), Positives = 155/334 (46%), Gaps = 37/334 (11%)

Query: 254 MLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGR 313
           +L   P P    F+++I    +  K  EA     L++   +       N+L+      G 
Sbjct: 16  LLGSSPTPQPRVFDLLIRTYTQSRKPREAFEAFRLILDHRVPIPAAASNALLAALSRAGW 75

Query: 314 IDTAREIFLSMHSKGCKHTVVSYNILINGYCKIL-------------------------- 347
              A + +  + S   +    + NI+++ YCK L                          
Sbjct: 76  PHLAADAYRLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNV 135

Query: 348 ---------NVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYN 398
                    + E AM+L   ++S G++  ++TYN++L GL ++G    A ++F EM  + 
Sbjct: 136 MVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFG 195

Query: 399 VEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAW 458
           V PD+ ++ ILI G C+   ++EA+K++  +     +  +  F+CLI    + G++D+A 
Sbjct: 196 VAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAM 255

Query: 459 ELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGF 518
               ++   GLVP  V Y+++I G CR G +  A      M   GC P+VVT+NTL++G 
Sbjct: 256 AYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGL 315

Query: 519 LQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVV 552
            +  +      LL++M   ER + PD  TF+ ++
Sbjct: 316 CKERRLLDAEGLLNEMR--ERGVPPDLCTFTTLI 347


>gi|449485308|ref|XP_004157129.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g31850, chloroplastic-like [Cucumis sativus]
          Length = 1113

 Score =  236 bits (602), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 145/484 (29%), Positives = 253/484 (52%), Gaps = 15/484 (3%)

Query: 77  SFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEA 136
           S+N L   + ++      +  YR++VS GL P   T + L+   G K     V       
Sbjct: 194 SYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMV------- 246

Query: 137 TWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSY 196
             L K M   G+RP+V T+   I    R G +  A  + ++M   D E       ++ +Y
Sbjct: 247 MVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRM---DDEG---CGPDLVTY 300

Query: 197 SIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLD 256
           +++ID+LC  G ++ AKELF++MK  G  P  V+  TL+  F   G+ +     + +M  
Sbjct: 301 TVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEA 360

Query: 257 LGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDT 316
            G  P+++TF +++D LCK    +EA    ++M ++G+ P+  TYN+L+ G    GRI+ 
Sbjct: 361 DGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIED 420

Query: 317 AREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLS 376
           A ++  +M S G + T  +Y   I+ + K     +A+  + ++ + G+   ++  N  L 
Sbjct: 421 ALKLLDTMESVGVQPTAYTYITFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLY 480

Query: 377 GLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEF 436
            L + G+   A+ +F+ ++   + PD  TYN+++    K   V EAV L   +  N  E 
Sbjct: 481 SLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEP 540

Query: 437 GIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFL 496
            + + N LID L KAGR+D AW++F ++    L PTVVTY+ ++ GL ++G+++KA +  
Sbjct: 541 DVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELF 600

Query: 497 LYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLA 556
             M    C+PN ++FNTL+  F +N++    +++  KM     +  PD  T++ V+  L 
Sbjct: 601 ESMIXKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMT--VMDCKPDVLTYNTVIYGLI 658

Query: 557 KDEK 560
           K+ K
Sbjct: 659 KENK 662



 Score =  198 bits (503), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 149/540 (27%), Positives = 255/540 (47%), Gaps = 53/540 (9%)

Query: 55  NLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLN 114
           +L+  + F+  M      P + +F +L   + K R +D   + +  +   G+LP+  T N
Sbjct: 347 DLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYN 406

Query: 115 ILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRL 174
            LI C      GL    RI++A  L   M + GV+P   TY T I+ F ++G    A+  
Sbjct: 407 TLI-C------GLLRAGRIEDALKLLDTMESVGVQPTAYTYITFIDYFGKSGETGKAVET 459

Query: 175 HKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTL 234
            +KM +     G++   NI + +  + SL + G + +AK +F  ++  G+ P  V    +
Sbjct: 460 FEKMKA----KGIVP--NIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMM 513

Query: 235 IHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGL 294
           +  +   G  +E   L  EM+  G  P+++  N +ID L K G+++EA  + + M    L
Sbjct: 514 MKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKL 573

Query: 295 NPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMS 354
           +P   TYN+L+ G    GR+  A E+F SM  K C    +S+N L++ +CK   VE A+ 
Sbjct: 574 SPTVVTYNTLLSGLGKEGRVQKAIELFESMIXKKCSPNTISFNTLLDCFCKNDEVELALK 633

Query: 355 LYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLC 414
           ++ ++     +  V+TYNT++ GL +  +  +A   F ++K  ++ PD  T   L+ GL 
Sbjct: 634 MFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQLK-KSMHPDHVTICTLLPGLV 692

Query: 415 KNNCVQEAVKLFH-MLEMNKFEFGIEIFNCLIDG-------------------------- 447
           K   + +A+ +    +   +F      +  L+ G                          
Sbjct: 693 KCGQIGDAISIARDFMYQVRFRVNRSFWEDLMGGTLVEAEMDKAIIFAEELVLNGICRED 752

Query: 448 ---------LCKAGRLDNAWELFHKLPQK-GLVPTVVTYSIMIHGLCRKGKLEKANDFLL 497
                    LCK  R   A+++F K  +K G+ PT+ +Y+ +I  L      EKA D   
Sbjct: 753 SFLIPLVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFK 812

Query: 498 YMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAK 557
            M+  GCAP+  TFN L+    ++ K +++ EL  +M    R   PD  T++IV+  LAK
Sbjct: 813 DMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMIS--RRCKPDAITYNIVISSLAK 870



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 139/572 (24%), Positives = 247/572 (43%), Gaps = 73/572 (12%)

Query: 19   VKLSSLFKSPRQIAAVSSPETQLNEFLHENCKSGIINLN-------------EARYFFGY 65
            V  + + K   ++  V      L+E +   C+  +I +N             EA   F  
Sbjct: 508  VTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDR 567

Query: 66   MTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKER 125
            M  M+ SP + ++N L   + K       I  +  ++     P+ ++ N L++CF   + 
Sbjct: 568  MKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIXKKCSPNTISFNTLLDCFCKNDE 627

Query: 126  ----------------------------GLCVENRIKEATWLFKNMIAFGVRPDVITYGT 157
                                        GL  EN++  A W F + +   + PD +T  T
Sbjct: 628  VELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFF-HQLKKSMHPDHVTICT 686

Query: 158  LINGFCRTGNLSVALRLHKK----------------MVSGDYENGLISKTNIFSYSIIID 201
            L+ G  + G +  A+ + +                 ++ G      + K  IF+  ++++
Sbjct: 687  LLPGLVKCGQIGDAISIARDFMYQVRFRVNRSFWEDLMGGTLVEAEMDKAIIFAEELVLN 746

Query: 202  SLCKEG---------LVDKAKELFLEM------KGRGINPAVVVCTTLIHGFCCAGNWEE 246
             +C+E          L    +EL+         K  GI+P +     LI         E+
Sbjct: 747  GICREDSFLIPLVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEK 806

Query: 247  VNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMD 306
               LF +M ++G  P+  TFN+++    K GKI E   L + MI R   PD  TYN ++ 
Sbjct: 807  AWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVIS 866

Query: 307  GYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQ 366
                   +D A + F  + S   + T  +Y  LI+G  K+  +EEAM L+ ++   G + 
Sbjct: 867  SLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKP 926

Query: 367  TVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLF 426
                +N L++G  + G    A +LF  M    + PDL +Y IL+D LC    V EA+  F
Sbjct: 927  NCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYF 986

Query: 427  HMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRK 486
            + L+    +     +N +I+GL K+ R++ A  L++++  +G+VP + TY+ ++  L   
Sbjct: 987  NELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLA 1046

Query: 487  GKLEKANDFLLYMEKNGCAPNVVTFNTLMHGF 518
            G +E+A      ++  G  P+V T+N L+ G+
Sbjct: 1047 GMVEQAKRMYEELQLAGLEPDVFTYNALIRGY 1078



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 133/538 (24%), Positives = 251/538 (46%), Gaps = 53/538 (9%)

Query: 49   CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
            C S +  ++EA      M      P +   N L  ++ K    D     + ++  + L P
Sbjct: 516  CYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSP 575

Query: 109  DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
              +T N L++       GL  E R+++A  LF++MI     P+ I++ TL++ FC+   +
Sbjct: 576  TVVTYNTLLS-------GLGKEGRVQKAIELFESMIXKKCSPNTISFNTLLDCFCKNDEV 628

Query: 169  SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
             +AL++  KM   D       K ++ +Y+ +I  L KE  V+ A   F ++K + ++P  
Sbjct: 629  ELALKMFSKMTVMD------CKPDVLTYNTVIYGLIKENKVNHAFWFFHQLK-KSMHPDH 681

Query: 229  VVCTTLIHGFCCAGN-----------------------WEEVNG------------LFIE 253
            V   TL+ G    G                        WE++ G            +F E
Sbjct: 682  VTICTLLPGLVKCGQIGDAISIARDFMYQVRFRVNRSFWEDLMGGTLVEAEMDKAIIFAE 741

Query: 254  MLDLGPRPNLLTFNV-MIDCLCKGGKINEANGLLELMIQR-GLNPDRFTYNSLMDGYCLV 311
             L L       +F + ++  LCK  +   A  + +   ++ G++P   +YN L+     V
Sbjct: 742  ELVLNGICREDSFLIPLVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEV 801

Query: 312  GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
               + A ++F  M + GC     ++N+L+  + K   + E   LY+++IS   +   ITY
Sbjct: 802  HYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITY 861

Query: 372  NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
            N ++S L ++     A   F ++   +  P   TY  LIDGL K   ++EA++LF  +  
Sbjct: 862  NIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSD 921

Query: 432  NKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEK 491
               +    IFN LI+G  K G  + A +LF ++  +G+ P + +Y+I++  LC  G++++
Sbjct: 922  YGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDE 981

Query: 492  ANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFS 549
            A  +   ++  G  P+ + +N +++G  ++ +  + + L ++M    R +VPD  T++
Sbjct: 982  ALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMR--NRGIVPDLYTYN 1037



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 109/431 (25%), Positives = 188/431 (43%), Gaps = 43/431 (9%)

Query: 127 LCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENG 186
           L V +++++   +F+ M    +R D+ TY T+       G L     +  KM    +   
Sbjct: 132 LRVHDKVEDMAAVFEFMQKKIIRRDLDTYLTIFKALSIRGGLRQMTTVLNKMRKAGF--- 188

Query: 187 LISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEE 246
                N +SY+ +I  L + G   +A E++  M   G+ P++   + L+       + E 
Sbjct: 189 ---VLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEM 245

Query: 247 VNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMD 306
           V  L  EM DLG RPN+ TF + I  L +                               
Sbjct: 246 VMVLLKEMEDLGLRPNVYTFTICIRVLGRA------------------------------ 275

Query: 307 GYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQ 366
                G+ID A EIF  M  +GC   +V+Y +LI+  C    +E A  L+ ++ +NG + 
Sbjct: 276 -----GKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKP 330

Query: 367 TVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLF 426
             + Y TLL      G     ++ + +M+     PD+ T+ IL+D LCK     EA   F
Sbjct: 331 DQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATF 390

Query: 427 HMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRK 486
            ++        +  +N LI GL +AGR+++A +L   +   G+ PT  TY   I    + 
Sbjct: 391 DVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLDTMESVGVQPTAYTYITFIDYFGKS 450

Query: 487 GKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDT 546
           G+  KA +    M+  G  PN+V  N  ++   +  +  +   + + +   E  L PD  
Sbjct: 451 GETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLR--ENGLAPDSV 508

Query: 547 TFSIVVDLLAK 557
           T+++++   +K
Sbjct: 509 TYNMMMKCYSK 519



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 97/322 (30%), Positives = 159/322 (49%), Gaps = 16/322 (4%)

Query: 20   KLSSLFKSPRQIAAVSSPETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFN 79
            K   LFK  + +       T  N  L  + KSG I   E    +  M   +  P   ++N
Sbjct: 806  KAWDLFKDMKNVGCAPDAFT-FNMLLAVHGKSGKIT--ELFELYKEMISRRCKPDAITYN 862

Query: 80   LLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWL 139
            ++  ++AK+ + D  + F+  LVS    P   T   LI+       GL    R++EA  L
Sbjct: 863  IVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLID-------GLAKVGRLEEAMRL 915

Query: 140  FKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSII 199
            F+ M  +G +P+   +  LING+ + G+   A +L K+MV+     G+  + ++ SY+I+
Sbjct: 916  FEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVN----EGI--RPDLKSYTIL 969

Query: 200  IDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGP 259
            +D LC  G VD+A   F E+K  G++P  +    +I+G   +   EE   L+ EM + G 
Sbjct: 970  VDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGI 1029

Query: 260  RPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTARE 319
             P+L T+N ++  L   G + +A  + E +   GL PD FTYN+L+ GY L    + A  
Sbjct: 1030 VPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALIRGYSLSENPEHAYT 1089

Query: 320  IFLSMHSKGCKHTVVSYNILIN 341
            ++ +M   GC   + +Y  L N
Sbjct: 1090 VYKNMMVDGCNPNIGTYAQLPN 1111



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 65/255 (25%), Positives = 118/255 (46%), Gaps = 2/255 (0%)

Query: 313 RIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYN 372
           +++    +F  M  K  +  + +Y  +         + +  ++  ++   G      +YN
Sbjct: 137 KVEDMAAVFEFMQKKIIRRDLDTYLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYN 196

Query: 373 TLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMN 432
            L+  L Q+G  G A +++  M    ++P L TY+ L+  L K    +  + L   +E  
Sbjct: 197 GLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDL 256

Query: 433 KFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKA 492
                +  F   I  L +AG++D A+E+F ++  +G  P +VTY+++I  LC  G+LE A
Sbjct: 257 GLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENA 316

Query: 493 NDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVV 552
            +  + M+ NG  P+ V + TL+  F          E   +M       +PD  TF+I+V
Sbjct: 317 KELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEAD--GYMPDVVTFTILV 374

Query: 553 DLLAKDEKYHECSAV 567
           D+L K   + E  A 
Sbjct: 375 DVLCKARDFDEAFAT 389



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 47/192 (24%), Positives = 84/192 (43%), Gaps = 2/192 (1%)

Query: 364 VRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAV 423
           V  T  T N +L  L    +      +F+ M+   +  DL TY  +   L     +++  
Sbjct: 118 VLHTTETCNFMLEFLRVHDKVEDMAAVFEFMQKKIIRRDLDTYLTIFKALSIRGGLRQMT 177

Query: 424 KLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGL 483
            + + +    F      +N LI  L ++G    A E++ ++  +GL P++ TYS ++  L
Sbjct: 178 TVLNKMRKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVAL 237

Query: 484 CRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVP 543
            +K   E     L  ME  G  PNV TF   +    +  K  +  E+  +M   +    P
Sbjct: 238 GKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRM--DDEGCGP 295

Query: 544 DDTTFSIVVDLL 555
           D  T+++++D L
Sbjct: 296 DLVTYTVLIDAL 307


>gi|449444190|ref|XP_004139858.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
 gi|449530677|ref|XP_004172320.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 839

 Score =  236 bits (601), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 139/461 (30%), Positives = 242/461 (52%), Gaps = 15/461 (3%)

Query: 98  YRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGT 157
           Y ++++ G+ P+  T N +I       + LC + +++EA  +  ++  +G  PD  TY +
Sbjct: 190 YIEMLNSGIRPNLFTFNAMI-------KILCNKGKVQEAELIMGHIFHYGACPDTFTYTS 242

Query: 158 LINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFL 217
           LI G C+ GNL +A  +  +MV    +       N  +YS +I+ LC EG +++A ++  
Sbjct: 243 LIIGHCKNGNLDLAFEMFDRMVKDGCD------PNSVTYSALINGLCSEGRLEEAMDMLE 296

Query: 218 EMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGG 277
           EM  +GI P V   T  I   C AG   E   L  +M   G  PN+ T+  +I  L + G
Sbjct: 297 EMIDKGIEPTVHAYTIPIVSLCDAGRSCEAVKLLGKMKKRGCGPNVQTYTALISGLSRDG 356

Query: 278 KINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYN 337
           K   A G+   M+  GL P   TY++L++   + GR +TA  IF  M S        +YN
Sbjct: 357 KFEVAIGVYHKMLADGLVPTAVTYSALINQLYVEGRFETALTIFEWMLSHDSLPNTETYN 416

Query: 338 ILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLY 397
           ++I G+C I  +++A +++ Q++  G    VITYN ++   F+ G    A +L + MK  
Sbjct: 417 VIIKGFCSIGYIQKATAIFDQMLKAGPSPNVITYNIIIHIYFKQGYMNNAMRLLEMMKGN 476

Query: 398 NVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNA 457
            ++ D  TY  LI G  +   ++ A  LF+ +  +     +  +N +I+G     ++D+A
Sbjct: 477 GLKLDTWTYANLISGFSRGGKLEHAFSLFNEMVEHGISPNVVTYNAIINGYLTVAKVDDA 536

Query: 458 WELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHG 517
             LF K+ + G VP+  TY++MI G  +  ++ +A +F   M K G  PNV+T+ + + G
Sbjct: 537 LALFWKMVESGNVPSSGTYNMMISGFSKTNRISEAENFCGKMVKQGLLPNVITYTSFIDG 596

Query: 518 FLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKD 558
             +N +TS   ++ H+M   +R+  P+  T+S ++D L ++
Sbjct: 597 LCKNGRTSLAFKIFHEMK--KRDYFPNLCTYSSLIDGLCQE 635



 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 149/521 (28%), Positives = 250/521 (47%), Gaps = 54/521 (10%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           C  G   + EA    G++ H    P   ++  L     KN + D     + ++V  G  P
Sbjct: 213 CNKG--KVQEAELIMGHIFHYGACPDTFTYTSLIIGHCKNGNLDLAFEMFDRMVKDGCDP 270

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRP------------------ 150
           + +T + LIN       GLC E R++EA  + + MI  G+ P                  
Sbjct: 271 NSVTYSALIN-------GLCSEGRLEEAMDMLEEMIDKGIEPTVHAYTIPIVSLCDAGRS 323

Query: 151 -----------------DVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNI 193
                            +V TY  LI+G  R G   VA+ ++ KM++    +GL+     
Sbjct: 324 CEAVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIGVYHKMLA----DGLVPTA-- 377

Query: 194 FSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIE 253
            +YS +I+ L  EG  + A  +F  M      P       +I GFC  G  ++   +F +
Sbjct: 378 VTYSALINQLYVEGRFETALTIFEWMLSHDSLPNTETYNVIIKGFCSIGYIQKATAIFDQ 437

Query: 254 MLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGR 313
           ML  GP PN++T+N++I    K G +N A  LLE+M   GL  D +TY +L+ G+   G+
Sbjct: 438 MLKAGPSPNVITYNIIIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYANLISGFSRGGK 497

Query: 314 IDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNT 373
           ++ A  +F  M   G    VV+YN +INGY  +  V++A++L+ +++ +G   +  TYN 
Sbjct: 498 LEHAFSLFNEMVEHGISPNVVTYNAIINGYLTVAKVDDALALFWKMVESGNVPSSGTYNM 557

Query: 374 LLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNK 433
           ++SG  +  +   A+    +M    + P++ TY   IDGLCKN     A K+FH ++   
Sbjct: 558 MISGFSKTNRISEAENFCGKMVKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHEMKKRD 617

Query: 434 FEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKAN 493
           +   +  ++ LIDGLC+ G+ ++A     +L   G  P V TY+ ++ GLC KG+  +A+
Sbjct: 618 YFPNLCTYSSLIDGLCQEGQAEDA----ERLLDDGCEPNVDTYTTLVRGLCGKGRCYEAD 673

Query: 494 DFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKM 534
             +  M+K G  P+   +  L+ G  +N +    +++   M
Sbjct: 674 QLVESMKKKGLQPSEEIYRALLVGQCKNLEVESALKIFDSM 714



 Score =  208 bits (530), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 135/477 (28%), Positives = 223/477 (46%), Gaps = 17/477 (3%)

Query: 58  EARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILI 117
           EA    G M      P + ++  L   ++++  ++  I  Y K+++ GL+P  +T + LI
Sbjct: 325 EAVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIGVYHKMLADGLVPTAVTYSALI 384

Query: 118 NCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKK 177
           N        L VE R + A  +F+ M++    P+  TY  +I GFC  G +  A  +  +
Sbjct: 385 N-------QLYVEGRFETALTIFEWMLSHDSLPNTETYNVIIKGFCSIGYIQKATAIFDQ 437

Query: 178 MVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHG 237
           M+            N+ +Y+III    K+G ++ A  L   MKG G+         LI G
Sbjct: 438 MLKAG------PSPNVITYNIIIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYANLISG 491

Query: 238 FCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPD 297
           F   G  E    LF EM++ G  PN++T+N +I+      K+++A  L   M++ G  P 
Sbjct: 492 FSRGGKLEHAFSLFNEMVEHGISPNVVTYNAIINGYLTVAKVDDALALFWKMVESGNVPS 551

Query: 298 RFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYR 357
             TYN ++ G+    RI  A      M  +G    V++Y   I+G CK      A  ++ 
Sbjct: 552 SGTYNMMISGFSKTNRISEAENFCGKMVKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFH 611

Query: 358 QIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNN 417
           ++        + TY++L+ GL Q GQA  A++L D+      EP++ TY  L+ GLC   
Sbjct: 612 EMKKRDYFPNLCTYSSLIDGLCQEGQAEDAERLLDD----GCEPNVDTYTTLVRGLCGKG 667

Query: 418 CVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYS 477
              EA +L   ++    +   EI+  L+ G CK   +++A ++F  +   G  P +  Y 
Sbjct: 668 RCYEADQLVESMKKKGLQPSEEIYRALLVGQCKNLEVESALKIFDSMVTTGFQPCLSDYK 727

Query: 478 IMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKM 534
            +I  LC+    +KA      M K     + V +  L+ G L+  +T   +ELLH M
Sbjct: 728 ALICALCKANFRQKAQCMFQTMLKKHWNSDEVVWTVLLDGLLKEGETDLSLELLHVM 784



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 117/384 (30%), Positives = 176/384 (45%), Gaps = 72/384 (18%)

Query: 250 LFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYC 309
           ++IEML+ G RPNL TFN MI  LC  GK+ EA  ++  +   G  PD FTY SL+ G+C
Sbjct: 189 VYIEMLNSGIRPNLFTFNAMIKILCNKGKVQEAELIMGHIFHYGACPDTFTYTSLIIGHC 248

Query: 310 LVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVI 369
             G +D A E+F  M   GC    V+Y+ LING C    +EEAM +  ++I  G+  TV 
Sbjct: 249 KNGNLDLAFEMFDRMVKDGCDPNSVTYSALINGLCSEGRLEEAMDMLEEMIDKGIEPTVH 308

Query: 370 TYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHML 429
            Y   +  L  AG++  A KL  +MK     P++ TY  LI GL ++   + A+ ++H +
Sbjct: 309 AYTIPIVSLCDAGRSCEAVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIGVYHKM 368

Query: 430 EMN--------------------KFEFGIEIF---------------NCLIDGLCKAGRL 454
             +                    +FE  + IF               N +I G C  G +
Sbjct: 369 LADGLVPTAVTYSALINQLYVEGRFETALTIFEWMLSHDSLPNTETYNVIIKGFCSIGYI 428

Query: 455 DNAWELFHKLPQKGLVPTVVTYSIMIH--------------------------------- 481
             A  +F ++ + G  P V+TY+I+IH                                 
Sbjct: 429 QKATAIFDQMLKAGPSPNVITYNIIIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYANL 488

Query: 482 --GLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPER 539
             G  R GKLE A      M ++G +PNVVT+N +++G+L   K    + L  KM E   
Sbjct: 489 ISGFSRGGKLEHAFSLFNEMVEHGISPNVVTYNAIINGYLTVAKVDDALALFWKMVESGN 548

Query: 540 NLVPDDTTFSIVVDLLAKDEKYHE 563
             VP   T+++++   +K  +  E
Sbjct: 549 --VPSSGTYNMMISGFSKTNRISE 570



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 116/415 (27%), Positives = 184/415 (44%), Gaps = 44/415 (10%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           C  G I   +A   F  M    PSP + ++N++     K  + +  +     +   GL  
Sbjct: 423 CSIGYIQ--KATAIFDQMLKAGPSPNVITYNIIIHIYFKQGYMNNAMRLLEMMKGNGLKL 480

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           D  T   LI+ F    RG     +++ A  LF  M+  G+ P+V+TY  +ING+     +
Sbjct: 481 DTWTYANLISGFS---RG----GKLEHAFSLFNEMVEHGISPNVVTYNAIINGYLTVAKV 533

Query: 169 SVALRLHKKMV-------SGDYENGLIS---KTN--------------------IFSYSI 198
             AL L  KMV       SG Y N +IS   KTN                    + +Y+ 
Sbjct: 534 DDALALFWKMVESGNVPSSGTY-NMMISGFSKTNRISEAENFCGKMVKQGLLPNVITYTS 592

Query: 199 IIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLG 258
            ID LCK G    A ++F EMK R   P +   ++LI G C  G  E+   L    LD G
Sbjct: 593 FIDGLCKNGRTSLAFKIFHEMKKRDYFPNLCTYSSLIDGLCQEGQAEDAERL----LDDG 648

Query: 259 PRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAR 318
             PN+ T+  ++  LC  G+  EA+ L+E M ++GL P    Y +L+ G C    +++A 
Sbjct: 649 CEPNVDTYTTLVRGLCGKGRCYEADQLVESMKKKGLQPSEEIYRALLVGQCKNLEVESAL 708

Query: 319 EIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGL 378
           +IF SM + G +  +  Y  LI   CK    ++A  +++ ++        + +  LL GL
Sbjct: 709 KIFDSMVTTGFQPCLSDYKALICALCKANFRQKAQCMFQTMLKKHWNSDEVVWTVLLDGL 768

Query: 379 FQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNK 433
            + G+   + +L   M+  N   +  T  +L   L    C  E  ++   L + K
Sbjct: 769 LKEGETDLSLELLHVMESRNCTLNFQTRVMLARELSALGCSIEIPQISKQLGIVK 823



 Score = 95.9 bits (237), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 63/199 (31%), Positives = 105/199 (52%), Gaps = 10/199 (5%)

Query: 367 TVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLF 426
           T+ +++TLL  L +    G  + ++ EM    + P+L T+N +I  LC    VQEA    
Sbjct: 166 TLYSFSTLLIQLGKFDMDGLGRDVYIEMLNSGIRPNLFTFNAMIKILCNKGKVQEA---- 221

Query: 427 HMLEMNKFEFG----IEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHG 482
            ++  + F +G       +  LI G CK G LD A+E+F ++ + G  P  VTYS +I+G
Sbjct: 222 ELIMGHIFHYGACPDTFTYTSLIIGHCKNGNLDLAFEMFDRMVKDGCDPNSVTYSALING 281

Query: 483 LCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLV 542
           LC +G+LE+A D L  M   G  P V  +   +       ++ + V+LL KM   +R   
Sbjct: 282 LCSEGRLEEAMDMLEEMIDKGIEPTVHAYTIPIVSLCDAGRSCEAVKLLGKMK--KRGCG 339

Query: 543 PDDTTFSIVVDLLAKDEKY 561
           P+  T++ ++  L++D K+
Sbjct: 340 PNVQTYTALISGLSRDGKF 358



 Score = 46.2 bits (108), Expect = 0.058,   Method: Compositional matrix adjust.
 Identities = 38/160 (23%), Positives = 80/160 (50%), Gaps = 8/160 (5%)

Query: 408 ILIDGLCKNNCVQEAVKLFHML-EMNK-FEFGIEI--FNCLIDGLCKAGRLDNAWELFHK 463
           IL+   C+N    E  ++  +L E+N  ++FG  +  F+ L+  L K        +++ +
Sbjct: 135 ILMIKSCRNE--GEVKRVIQVLSEINTTYDFGYTLYSFSTLLIQLGKFDMDGLGRDVYIE 192

Query: 464 LPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNK 523
           +   G+ P + T++ MI  LC KGK+++A   + ++   G  P+  T+ +L+ G  +N  
Sbjct: 193 MLNSGIRPNLFTFNAMIKILCNKGKVQEAELIMGHIFHYGACPDTFTYTSLIIGHCKNGN 252

Query: 524 TSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
                E+  +M +   +  P+  T+S +++ L  + +  E
Sbjct: 253 LDLAFEMFDRMVKDGCD--PNSVTYSALINGLCSEGRLEE 290


>gi|255561943|ref|XP_002521980.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223538784|gb|EEF40384.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 584

 Score =  236 bits (601), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 132/427 (30%), Positives = 219/427 (51%), Gaps = 17/427 (3%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
           P + ++N L     K    +       ++ S G LPD +T NI+I  F       C   +
Sbjct: 136 PDVFAYNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSF-------CSRGK 188

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
           +  A  +F+ ++     P VITY  LI      G + VA++L  +M+S   E       +
Sbjct: 189 LDLALEIFEELLKDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLE------PD 242

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
             +Y+ II  +CKE +VDKA EL   +  RG  P ++    L+      G W E   L  
Sbjct: 243 TLTYNAIIRGMCKEMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLIS 302

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
           EM+ +G +PN++T +++I  LC+ GK+ EA  LL  M ++GL PD + Y+ L+ G+C  G
Sbjct: 303 EMISIGCKPNVVTHSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREG 362

Query: 313 RIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYN 372
           R+D A E    M S GC   +V+YN ++ G C+    ++A+ ++ ++   G    V +YN
Sbjct: 363 RLDLATEFLEYMISDGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYN 422

Query: 373 TLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMN 432
           TL S L+ +G    A ++  ++    ++PD  TYN LI  LC++  V EA++L   ++  
Sbjct: 423 TLFSALWSSGDRYRALEMILKLLNQGIDPDEITYNSLISCLCRDGMVDEAIELLVDMQSG 482

Query: 433 KFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGL----CRKGK 488
           ++   +  +N ++ GLCK  R ++A E+   + +KG  P   TY ++I G+     R   
Sbjct: 483 RYRPNVVSYNIILLGLCKVNRANDAIEVLAAMTEKGCQPNETTYILLIEGIGFSGLRAEA 542

Query: 489 LEKANDF 495
           +E AN  
Sbjct: 543 MELANSL 549



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 136/463 (29%), Positives = 230/463 (49%), Gaps = 16/463 (3%)

Query: 91  YDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRP 150
           Y+  + F   +V  G  PD +    LI  F N          I +AT + + +  +G +P
Sbjct: 85  YNESLYFLECMVDKGYTPDVILCTKLIKGFFNSRN-------IGKATRVMEILERYG-KP 136

Query: 151 DVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVD 210
           DV  Y  LI+GF +   L  A R+  +M S  +        ++ +Y+I+I S C  G +D
Sbjct: 137 DVFAYNALISGFIKANQLENANRVLDRMKSRGF------LPDVVTYNIMIGSFCSRGKLD 190

Query: 211 KAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMI 270
            A E+F E+      P V+  T LI      G  +    L  EML  G  P+ LT+N +I
Sbjct: 191 LALEIFEELLKDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAII 250

Query: 271 DCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCK 330
             +CK   +++A  LL  +  RG  PD  TYN L+      G+     ++   M S GCK
Sbjct: 251 RGMCKEMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCK 310

Query: 331 HTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKL 390
             VV+++ILI   C+   VEEA++L R +   G++     Y+ L++G  + G+   A + 
Sbjct: 311 PNVVTHSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEF 370

Query: 391 FDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCK 450
            + M      PD+  YN ++ GLC+     +A+++F  L+       +  +N L   L  
Sbjct: 371 LEYMISDGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSALWS 430

Query: 451 AGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVT 510
           +G    A E+  KL  +G+ P  +TY+ +I  LCR G +++A + L+ M+     PNVV+
Sbjct: 431 SGDRYRALEMILKLLNQGIDPDEITYNSLISCLCRDGMVDEAIELLVDMQSGRYRPNVVS 490

Query: 511 FNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
           +N ++ G  + N+ +  +E+L  M   E+   P++TT+ ++++
Sbjct: 491 YNIILLGLCKVNRANDAIEVLAAMT--EKGCQPNETTYILLIE 531



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 138/520 (26%), Positives = 248/520 (47%), Gaps = 20/520 (3%)

Query: 18  KVKLSSLFKSPRQIAAVSSPETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISS 77
           KV++S+  +    + +    E  L + L+ +C++G    NE+ YF   M     +P +  
Sbjct: 50  KVRVSAETRQT-HVLSFDFKEVHLMKLLNRSCRAG--KYNESLYFLECMVDKGYTPDVIL 106

Query: 78  FNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEAT 137
              L      +R+          L   G  PD    N LI+       G    N+++ A 
Sbjct: 107 CTKLIKGFFNSRNIGKATRVMEILERYGK-PDVFAYNALIS-------GFIKANQLENAN 158

Query: 138 WLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYS 197
            +   M + G  PDV+TY  +I  FC  G L +AL + ++++  + E        + +Y+
Sbjct: 159 RVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLALEIFEELLKDNCE------PTVITYT 212

Query: 198 IIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDL 257
           I+I++   +G +D A +L  EM  +G+ P  +    +I G C     ++   L   +   
Sbjct: 213 ILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGMCKEMMVDKAFELLRSLSSR 272

Query: 258 GPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTA 317
           G +P+++T+N+++  L   GK +E   L+  MI  G  P+  T++ L+   C  G+++ A
Sbjct: 273 GCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPNVVTHSILIGTLCRDGKVEEA 332

Query: 318 REIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSG 377
             +  SM  KG K     Y+ LI G+C+   ++ A      +IS+G    ++ YNT+++G
Sbjct: 333 VNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLEYMISDGCLPDIVNYNTIMAG 392

Query: 378 LFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFG 437
           L + G+A  A ++F+++      P++S+YN L   L  +     A+++   L     +  
Sbjct: 393 LCRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSALWSSGDRYRALEMILKLLNQGIDPD 452

Query: 438 IEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLL 497
              +N LI  LC+ G +D A EL   +      P VV+Y+I++ GLC+  +   A + L 
Sbjct: 453 EITYNSLISCLCRDGMVDEAIELLVDMQSGRYRPNVVSYNIILLGLCKVNRANDAIEVLA 512

Query: 498 YMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVEL---LHKM 534
            M + GC PN  T+  L+ G   +   ++ +EL   LH M
Sbjct: 513 AMTEKGCQPNETTYILLIEGIGFSGLRAEAMELANSLHGM 552



 Score =  198 bits (503), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 124/431 (28%), Positives = 204/431 (47%), Gaps = 44/431 (10%)

Query: 128 CVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGL 187
           C   +  E+ +  + M+  G  PDVI    LI GF  + N+  A R+ +           
Sbjct: 80  CRAGKYNESLYFLECMVDKGYTPDVILCTKLIKGFFNSRNIGKATRVME----------- 128

Query: 188 ISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEV 247
                                        LE  G+   P V     LI GF  A   E  
Sbjct: 129 ----------------------------ILERYGK---PDVFAYNALISGFIKANQLENA 157

Query: 248 NGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDG 307
           N +   M   G  P+++T+N+MI   C  GK++ A  + E +++    P   TY  L++ 
Sbjct: 158 NRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLALEIFEELLKDNCEPTVITYTILIEA 217

Query: 308 YCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQT 367
             L G ID A ++   M SKG +   ++YN +I G CK + V++A  L R + S G +  
Sbjct: 218 TILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGMCKEMMVDKAFELLRSLSSRGCKPD 277

Query: 368 VITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFH 427
           +ITYN LL  L   G+    +KL  EM     +P++ T++ILI  LC++  V+EAV L  
Sbjct: 278 IITYNILLRTLLSRGKWSEGEKLISEMISIGCKPNVVTHSILIGTLCRDGKVEEAVNLLR 337

Query: 428 MLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKG 487
            ++    +     ++ LI G C+ GRLD A E    +   G +P +V Y+ ++ GLCR G
Sbjct: 338 SMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLEYMISDGCLPDIVNYNTIMAGLCRTG 397

Query: 488 KLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTT 547
           K ++A +    +++ GC PNV ++NTL      +    + +E++ K+    + + PD+ T
Sbjct: 398 KADQALEVFEKLDEVGCPPNVSSYNTLFSALWSSGDRYRALEMILKLL--NQGIDPDEIT 455

Query: 548 FSIVVDLLAKD 558
           ++ ++  L +D
Sbjct: 456 YNSLISCLCRD 466


>gi|359473521|ref|XP_002273398.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Vitis vinifera]
          Length = 755

 Score =  236 bits (601), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 159/559 (28%), Positives = 274/559 (49%), Gaps = 33/559 (5%)

Query: 12  SSETVSKVKLSSLFKSPRQIAAVSSPETQLNEFLHENCKSGIINLNEARYFFGYMTHMQP 71
           +SE   K++   +F  PR            N  LH   K G  +L  +R FF  M     
Sbjct: 204 ASECFLKMRKFRVFPKPRSC----------NALLHRLSKVGRGDL--SRKFFKDMGAAGI 251

Query: 72  SPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVEN 131
              + ++N++   + K    +   S + ++   G  PD +T N LI+  G+ + GL    
Sbjct: 252 KRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLID--GHGKLGL---- 305

Query: 132 RIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKT 191
            + E   +F+ M      PDVITY  LIN FC+   +  A     +M +    NGL  K 
Sbjct: 306 -LDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKA----NGL--KP 358

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
           N+ +YS  ID+ CKEG++ +A + F++M+   + P     T+LI   C AGN  E   L 
Sbjct: 359 NVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLV 418

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
            E+L  G + N++T+  ++D LC+ G++ EA  +   M+  G+ P++ TY +L+ G+   
Sbjct: 419 EEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKA 478

Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
             ++ A++I   M  K  K  ++ Y  ++ G C    +EEA  L  +I  +G+    + Y
Sbjct: 479 KEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIY 538

Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
            TL+   F++GQA  A  L +EM    +     TY  LIDGLCK+  VQEA+  F  +  
Sbjct: 539 TTLMDAYFKSGQATEALTLLEEMLDLGLIATEVTYCALIDGLCKSGLVQEAMHHFGRMSE 598

Query: 432 NKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEK 491
              +  + ++  L+DGLCK    + A +LF ++  KG++P  + Y+ +I G  + G L++
Sbjct: 599 IGLQPNVAVYTALVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQE 658

Query: 492 ANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIV 551
           A +    M + G   ++  +  L+ G   + +  K   LL +M    + ++PD+  +  +
Sbjct: 659 ALNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEMI--GKGVLPDEVVYMCL 716

Query: 552 VDLLAKDEKYHECSAVSKS 570
           +      +KY+    V ++
Sbjct: 717 I------KKYYALGKVDEA 729



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 134/481 (27%), Positives = 232/481 (48%), Gaps = 15/481 (3%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
           P    F+ LF A+ +    +     + K+    + P   + N L++      RG      
Sbjct: 183 PGFGVFDALFSALIELGMLEEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRG------ 236

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
              +   FK+M A G++  V TY  +I+  C+ G+L +A  L  +M    +        +
Sbjct: 237 -DLSRKFFKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGF------TPD 289

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
           I +Y+ +ID   K GL+D+   +F +MK    +P V+    LI+ FC      +      
Sbjct: 290 IVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLH 349

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
           EM   G +PN++T++  ID  CK G + EA      M +  L P+ FTY SL+D  C  G
Sbjct: 350 EMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAG 409

Query: 313 RIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYN 372
            +  A ++   +   G K  VV+Y  L++G C+   ++EA  ++R +++ GV     TY 
Sbjct: 410 NLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYT 469

Query: 373 TLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMN 432
            L+ G  +A +  YA+ +  EMK   ++PDL  Y  ++ GLC  + ++EA  L   ++ +
Sbjct: 470 ALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKES 529

Query: 433 KFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKA 492
                  I+  L+D   K+G+   A  L  ++   GL+ T VTY  +I GLC+ G +++A
Sbjct: 530 GINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLGLIATEVTYCALIDGLCKSGLVQEA 589

Query: 493 NDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVV 552
                 M + G  PNV  +  L+ G  +NN      +L  +M   ++ ++PD   ++ ++
Sbjct: 590 MHHFGRMSEIGLQPNVAVYTALVDGLCKNNCFEVAKKLFDEML--DKGMMPDKIAYTALI 647

Query: 553 D 553
           D
Sbjct: 648 D 648



 Score =  202 bits (514), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 149/516 (28%), Positives = 233/516 (45%), Gaps = 36/516 (6%)

Query: 16  VSKVKLSSLFKSPRQIAAVSSPETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPI 75
           V +  LS  F      A +       N  +   CK G  +L  AR  F  M     +P I
Sbjct: 233 VGRGDLSRKFFKDMGAAGIKRSVFTYNIMIDYLCKEG--DLEMARSLFTQMKEAGFTPDI 290

Query: 76  SSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKER---------- 125
            ++N L     K    D  I  + ++      PD +T N LINCF   ER          
Sbjct: 291 VTYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHE 350

Query: 126 ------------------GLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGN 167
                               C E  ++EA   F +M    + P+  TY +LI+  C+ GN
Sbjct: 351 MKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGN 410

Query: 168 LSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPA 227
           L+ AL+L ++++          K N+ +Y+ ++D LC+EG + +A+E+F  M   G+ P 
Sbjct: 411 LAEALKLVEEILQAGI------KLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPN 464

Query: 228 VVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLE 287
               T L+HGF  A   E    +  EM +   +P+LL +  ++  LC   ++ EA  L+ 
Sbjct: 465 QETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIG 524

Query: 288 LMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKIL 347
            + + G+N +   Y +LMD Y   G+   A  +   M   G   T V+Y  LI+G CK  
Sbjct: 525 EIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLGLIATEVTYCALIDGLCKSG 584

Query: 348 NVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYN 407
            V+EAM  + ++   G++  V  Y  L+ GL +      A+KLFDEM    + PD   Y 
Sbjct: 585 LVQEAMHHFGRMSEIGLQPNVAVYTALVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYT 644

Query: 408 ILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQK 467
            LIDG  K+  +QEA+ L   +     E  +  +  LI GL  +G++  A  L  ++  K
Sbjct: 645 ALIDGNMKHGNLQEALNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEMIGK 704

Query: 468 GLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNG 503
           G++P  V Y  +I      GK+++A +    M K G
Sbjct: 705 GVLPDEVVYMCLIKKYYALGKVDEALELQNEMAKRG 740



 Score =  129 bits (323), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 92/316 (29%), Positives = 148/316 (46%), Gaps = 15/316 (4%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           C+ G   + EA   F  M +   +P   ++  L     K +  +      +++    + P
Sbjct: 441 CEEG--RMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKP 498

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           D L        +G    GLC E+R++EA  L   +   G+  + + Y TL++ + ++G  
Sbjct: 499 DLLL-------YGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQA 551

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
           + AL L ++M+    + GLI+     +Y  +ID LCK GLV +A   F  M   G+ P V
Sbjct: 552 TEALTLLEEML----DLGLIATE--VTYCALIDGLCKSGLVQEAMHHFGRMSEIGLQPNV 605

Query: 229 VVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLEL 288
            V T L+ G C    +E    LF EMLD G  P+ + +  +ID   K G + EA  L + 
Sbjct: 606 AVYTALVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDR 665

Query: 289 MIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILN 348
           MI+ G+  D   Y +L+ G    G++  AR +   M  KG     V Y  LI  Y  +  
Sbjct: 666 MIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCLIKKYYALGK 725

Query: 349 VEEAMSLYRQIISNGV 364
           V+EA+ L  ++   G+
Sbjct: 726 VDEALELQNEMAKRGM 741



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 106/400 (26%), Positives = 174/400 (43%), Gaps = 50/400 (12%)

Query: 44  FLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVS 103
           F+   CK G+  L EA  FF  M  +  +P   ++  L  A  K  +    +    +++ 
Sbjct: 366 FIDAFCKEGM--LQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQ 423

Query: 104 IGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFC 163
            G+  + +T   L++       GLC E R+KEA  +F+ M+  GV P+  TY  L++GF 
Sbjct: 424 AGIKLNVVTYTALLD-------GLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFI 476

Query: 164 RTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRG 223
           +   +  A  + K+M           K ++  Y  I+  LC E  +++AK L  E+K  G
Sbjct: 477 KAKEMEYAKDILKEMKEK------CIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESG 530

Query: 224 INPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEA- 282
           IN   V+ TTL+  +  +G   E   L  EMLDLG     +T+  +ID LCK G + EA 
Sbjct: 531 INTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLGLIATEVTYCALIDGLCKSGLVQEAM 590

Query: 283 ----------------------------------NGLLELMIQRGLNPDRFTYNSLMDGY 308
                                               L + M+ +G+ PD+  Y +L+DG 
Sbjct: 591 HHFGRMSEIGLQPNVAVYTALVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGN 650

Query: 309 CLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTV 368
              G +  A  +   M   G +  + +Y  LI G      V++A +L  ++I  GV    
Sbjct: 651 MKHGNLQEALNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDE 710

Query: 369 ITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNI 408
           + Y  L+   +  G+   A +L +EM    +   LS + +
Sbjct: 711 VVYMCLIKKYYALGKVDEALELQNEMAKRGMITGLSDHAV 750


>gi|15237662|ref|NP_201237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171655|sp|Q9FMF6.1|PP444_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g64320, mitochondrial; Flags: Precursor
 gi|9759408|dbj|BAB09863.1| unnamed protein product [Arabidopsis thaliana]
 gi|332010486|gb|AED97869.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 730

 Score =  235 bits (600), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 146/500 (29%), Positives = 253/500 (50%), Gaps = 21/500 (4%)

Query: 59  ARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILIN 118
           A  F+  ++   P P + +F ++  A       D+ +S  R +   G +P+ +    LI+
Sbjct: 202 ANVFYDMLSRKIP-PTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIH 260

Query: 119 CFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKM 178
                    C  NR+ EA  L + M   G  PD  T+  +I G C+   ++ A ++  +M
Sbjct: 261 SLSK-----C--NRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRM 313

Query: 179 VSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGF 238
           +   +    I+      Y  +++ LCK G VD AK+LF  +      P +V+  TLIHGF
Sbjct: 314 LIRGFAPDDIT------YGYLMNGLCKIGRVDAAKDLFYRIP----KPEIVIFNTLIHGF 363

Query: 239 CCAGNWEEVNGLFIEML-DLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPD 297
              G  ++   +  +M+   G  P++ T+N +I    K G +  A  +L  M  +G  P+
Sbjct: 364 VTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPN 423

Query: 298 RFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYR 357
            ++Y  L+DG+C +G+ID A  +   M + G K   V +N LI+ +CK   + EA+ ++R
Sbjct: 424 VYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFR 483

Query: 358 QIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNN 417
           ++   G +  V T+N+L+SGL +  +  +A  L  +M    V  +  TYN LI+   +  
Sbjct: 484 EMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRG 543

Query: 418 CVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYS 477
            ++EA KL + +           +N LI GLC+AG +D A  LF K+ + G  P+ ++ +
Sbjct: 544 EIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCN 603

Query: 478 IMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEP 537
           I+I+GLCR G +E+A +F   M   G  P++VTFN+L++G  +  +    + +  K+   
Sbjct: 604 ILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQ-- 661

Query: 538 ERNLVPDDTTFSIVVDLLAK 557
              + PD  TF+ ++  L K
Sbjct: 662 AEGIPPDTVTFNTLMSWLCK 681



 Score =  224 bits (572), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 149/480 (31%), Positives = 235/480 (48%), Gaps = 33/480 (6%)

Query: 66  MTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKER 125
           MT     P    +  L  +++K    +  +    ++  +G +PD  T N +I        
Sbjct: 243 MTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVI-------L 295

Query: 126 GLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKK-------- 177
           GLC  +RI EA  +   M+  G  PD ITYG L+NG C+ G +  A  L  +        
Sbjct: 296 GLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVI 355

Query: 178 ---MVSGDYENGLISKTN------IFSYSIIID---------SLCKEGLVDKAKELFLEM 219
              ++ G   +G +          + SY I+ D            KEGLV  A E+  +M
Sbjct: 356 FNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDM 415

Query: 220 KGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKI 279
           + +G  P V   T L+ GFC  G  +E   +  EM   G +PN + FN +I   CK  +I
Sbjct: 416 RNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRI 475

Query: 280 NEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNIL 339
            EA  +   M ++G  PD +T+NSL+ G C V  I  A  +   M S+G     V+YN L
Sbjct: 476 PEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTL 535

Query: 340 INGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNV 399
           IN + +   ++EA  L  +++  G     ITYN+L+ GL +AG+   A+ LF++M     
Sbjct: 536 INAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGH 595

Query: 400 EPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWE 459
            P   + NILI+GLC++  V+EAV+    + +      I  FN LI+GLC+AGR+++   
Sbjct: 596 APSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLT 655

Query: 460 LFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFL 519
           +F KL  +G+ P  VT++ ++  LC+ G +  A   L    ++G  PN  T++ L+   +
Sbjct: 656 MFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSII 715



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 129/438 (29%), Positives = 217/438 (49%), Gaps = 20/438 (4%)

Query: 56  LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNI 115
           +NEA      M     +P   ++  L   + K    DA    + ++      P+ +  N 
Sbjct: 303 INEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPK----PEIVIFNT 358

Query: 116 LINCFGNKERGLCVENRIKEATWLFKNMI-AFGVRPDVITYGTLINGFCRTGNLSVALR- 173
           LI+       G     R+ +A  +  +M+ ++G+ PDV TY +LI G+ + G + +AL  
Sbjct: 359 LIH-------GFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEV 411

Query: 174 LHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTT 233
           LH     G        K N++SY+I++D  CK G +D+A  +  EM   G+ P  V    
Sbjct: 412 LHDMRNKG-------CKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNC 464

Query: 234 LIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRG 293
           LI  FC      E   +F EM   G +P++ TFN +I  LC+  +I  A  LL  MI  G
Sbjct: 465 LISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEG 524

Query: 294 LNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAM 353
           +  +  TYN+L++ +   G I  AR++   M  +G     ++YN LI G C+   V++A 
Sbjct: 525 VVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKAR 584

Query: 354 SLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGL 413
           SL+ +++ +G   + I+ N L++GL ++G    A +   EM L    PD+ T+N LI+GL
Sbjct: 585 SLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGL 644

Query: 414 CKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTV 473
           C+   +++ + +F  L+          FN L+  LCK G + +A  L  +  + G VP  
Sbjct: 645 CRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNH 704

Query: 474 VTYSIMIHGLCRKGKLEK 491
            T+SI++  +  +  L++
Sbjct: 705 RTWSILLQSIIPQETLDR 722



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 106/372 (28%), Positives = 177/372 (47%), Gaps = 32/372 (8%)

Query: 195 SYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEM 254
           SY+++++ L        A  +F +M  R I P +     ++  FC     +    L  +M
Sbjct: 184 SYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDM 243

Query: 255 LDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRI 314
              G  PN + +  +I  L K  ++NEA  LLE M   G  PD  T+N ++ G C   RI
Sbjct: 244 TKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRI 303

Query: 315 DTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQI--------------- 359
           + A ++   M  +G     ++Y  L+NG CKI  V+ A  L+ +I               
Sbjct: 304 NEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGF 363

Query: 360 -----------------ISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPD 402
                             S G+   V TYN+L+ G ++ G  G A ++  +M+    +P+
Sbjct: 364 VTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPN 423

Query: 403 LSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFH 462
           + +Y IL+DG CK   + EA  + + +  +  +     FNCLI   CK  R+  A E+F 
Sbjct: 424 VYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFR 483

Query: 463 KLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNN 522
           ++P+KG  P V T++ +I GLC   +++ A   L  M   G   N VT+NTL++ FL+  
Sbjct: 484 EMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRG 543

Query: 523 KTSKVVELLHKM 534
           +  +  +L+++M
Sbjct: 544 EIKEARKLVNEM 555



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 113/405 (27%), Positives = 179/405 (44%), Gaps = 44/405 (10%)

Query: 196 YSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEML 255
           Y ++I  L   G       L ++MK  GI     +  +++  +  AG   +   L +EM 
Sbjct: 114 YQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEMR 173

Query: 256 DL-GPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRI 314
           ++    P   ++NV+++ L  G     A  +   M+ R + P  FT+  +M  +C V  I
Sbjct: 174 NVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEI 233

Query: 315 DTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTL 374
           D+A  +   M   GC    V Y  LI+   K   V EA+ L  ++   G      T+N +
Sbjct: 234 DSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDV 293

Query: 375 LSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKF 434
           + GL +  +   A K+ + M +    PD  TY  L++GLCK   V  A  LF+ +   + 
Sbjct: 294 ILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPE- 352

Query: 435 EFGIEIFNCLIDGLCKAGRLDNA---------------------------W--------- 458
              I IFN LI G    GRLD+A                           W         
Sbjct: 353 ---IVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLAL 409

Query: 459 ELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGF 518
           E+ H +  KG  P V +Y+I++ G C+ GK+++A + L  M  +G  PN V FN L+  F
Sbjct: 410 EVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAF 469

Query: 519 LQNNKTSKVVELLHKMAEPERNLVPDDTTF-SIVVDLLAKDEKYH 562
            + ++  + VE+  +M  P +   PD  TF S++  L   DE  H
Sbjct: 470 CKEHRIPEAVEIFREM--PRKGCKPDVYTFNSLISGLCEVDEIKH 512



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 94/300 (31%), Positives = 138/300 (46%), Gaps = 40/300 (13%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CK G I+  EA      M+     P    FN L  A  K       +  +R++   G  P
Sbjct: 435 CKLGKID--EAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKP 492

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           D  T N LI+       GLC  + IK A WL ++MI+ GV  + +TY TLIN F R G +
Sbjct: 493 DVYTFNSLIS-------GLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEI 545

Query: 169 SVALRLHKKMV----------------------SGDYENGLISK--------TNIFSYSI 198
             A +L  +MV                        D    L  K        +NI S +I
Sbjct: 546 KEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNI-SCNI 604

Query: 199 IIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLG 258
           +I+ LC+ G+V++A E   EM  RG  P +V   +LI+G C AG  E+   +F ++   G
Sbjct: 605 LINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEG 664

Query: 259 PRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAR 318
             P+ +TFN ++  LCKGG + +A  LL+  I+ G  P+  T++ L+        +D  R
Sbjct: 665 IPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSIIPQETLDRRR 724


>gi|255548994|ref|XP_002515553.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223545497|gb|EEF47002.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 927

 Score =  235 bits (600), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 148/492 (30%), Positives = 256/492 (52%), Gaps = 16/492 (3%)

Query: 62  FFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFG 121
           FF  M    PSP   ++ +L     KN +       Y ++ +  + P    +N LI  F 
Sbjct: 371 FFDKMNENGPSPNRVTYAVLIEWCCKNGNMAKAYDLYTQMKNKNICPTVFIVNSLIRGF- 429

Query: 122 NKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSG 181
                L VE+R +EA+ LF   +A  +  ++ TY +L++  C+ G +S A  L +KM+  
Sbjct: 430 -----LKVESR-EEASKLFDEAVACDI-ANIFTYNSLLSWLCKEGKMSEATTLWQKML-- 480

Query: 182 DYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCA 241
             + GL + T + SY+ +I   C++G +D A  +F +M   G+ P V+  + L+ G+   
Sbjct: 481 --DKGL-APTKV-SYNSMILGHCRQGNLDMAASVFSDMLDCGLKPNVITYSILMDGYFKN 536

Query: 242 GNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTY 301
           G+ E    +F  M+D    P+  T+N+ I+ LCK G+ +EA  +L+  +++G  P   TY
Sbjct: 537 GDTEYAFYVFDRMVDENIVPSDFTYNIKINGLCKVGRTSEAQDMLKKFVEKGFVPVCLTY 596

Query: 302 NSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIIS 361
           NS+MDG+   G + +A   +  M   G    V++Y  LING+CK  N + A+ +  ++ +
Sbjct: 597 NSIMDGFIKEGSVSSALTAYREMCESGVSPNVITYTTLINGFCKNNNTDLALKMRNEMRN 656

Query: 362 NGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQE 421
            G+   +  Y  L+ G  +      A  LF E+    + P+   YN LI G    N ++ 
Sbjct: 657 KGLELDIAAYGALIDGFCKKQDIETASWLFSELLDGGLSPNSVIYNSLISGYRNLNNMEA 716

Query: 422 AVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIH 481
           A+ L   +        ++ +  LIDGL K GRL  A +L+ ++  KG++P ++ Y+++I+
Sbjct: 717 ALNLQKRMLGEGISCDLQTYTTLIDGLLKEGRLVLALDLYSEMSAKGIIPDIIIYTVLIN 776

Query: 482 GLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNL 541
           GLC KG+LE A   L  ME++   PNV  +N L+ G  +     +   L ++M   ++ L
Sbjct: 777 GLCGKGQLENAQKILAEMERDSITPNVPIYNALIAGHFKAGNLQEAFRLHNEML--DKGL 834

Query: 542 VPDDTTFSIVVD 553
            P+DTT+ I+++
Sbjct: 835 TPNDTTYDILIN 846



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 161/616 (26%), Positives = 266/616 (43%), Gaps = 119/616 (19%)

Query: 41  LNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRK 100
           LN ++  N       LN+A   F  +      P I   N L  A+ KN         Y K
Sbjct: 181 LNSYIKAN------KLNDAIGCFNRLVESDIVPWIKFLNFLLTALVKNDMIYEAREVYEK 234

Query: 101 LVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLIN 160
           +V  G+  D  T++I++       R    +N  +EA   F    + GV+ D   Y  +I 
Sbjct: 235 MVLKGVHGDCFTVHIMM-------RANLKDNNEEEAKKFFLEAKSRGVKLDAAAYSIVIQ 287

Query: 161 GFCRT-----------------------------------GNLSVALRLHKKMVS-GDYE 184
            FC+                                    GN+  ALRL  +MVS G   
Sbjct: 288 AFCKNLDVELACGLLKDMRDKGWVPSEGTFTSVIGACVKQGNMVEALRLKDEMVSCGVQM 347

Query: 185 NGLISKT----------------------------NIFSYSIIIDSLCKEGLVDKAKELF 216
           N +++ T                            N  +Y+++I+  CK G + KA +L+
Sbjct: 348 NVVVATTLVKGYCKQDKLVSALEFFDKMNENGPSPNRVTYAVLIEWCCKNGNMAKAYDLY 407

Query: 217 LEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEML--DLGPRPNLLTFNVMIDCLC 274
            +MK + I P V +  +LI GF    + EE + LF E +  D+    N+ T+N ++  LC
Sbjct: 408 TQMKNKNICPTVFIVNSLIRGFLKVESREEASKLFDEAVACDIA---NIFTYNSLLSWLC 464

Query: 275 KGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVV 334
           K GK++EA  L + M+ +GL P + +YNS++ G+C  G +D A  +F  M   G K  V+
Sbjct: 465 KEGKMSEATTLWQKMLDKGLAPTKVSYNSMILGHCRQGNLDMAASVFSDMLDCGLKPNVI 524

Query: 335 SYNILINGY-----------------------------------CKILNVEEAMSLYRQI 359
           +Y+IL++GY                                   CK+    EA  + ++ 
Sbjct: 525 TYSILMDGYFKNGDTEYAFYVFDRMVDENIVPSDFTYNIKINGLCKVGRTSEAQDMLKKF 584

Query: 360 ISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCV 419
           +  G     +TYN+++ G  + G    A   + EM    V P++ TY  LI+G CKNN  
Sbjct: 585 VEKGFVPVCLTYNSIMDGFIKEGSVSSALTAYREMCESGVSPNVITYTTLINGFCKNNNT 644

Query: 420 QEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIM 479
             A+K+ + +     E  I  +  LIDG CK   ++ A  LF +L   GL P  V Y+ +
Sbjct: 645 DLALKMRNEMRNKGLELDIAAYGALIDGFCKKQDIETASWLFSELLDGGLSPNSVIYNSL 704

Query: 480 IHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPER 539
           I G      +E A +    M   G + ++ T+ TL+ G L+  +    ++L  +M+   +
Sbjct: 705 ISGYRNLNNMEAALNLQKRMLGEGISCDLQTYTTLIDGLLKEGRLVLALDLYSEMS--AK 762

Query: 540 NLVPDDTTFSIVVDLL 555
            ++PD   ++++++ L
Sbjct: 763 GIIPDIIIYTVLINGL 778



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 123/413 (29%), Positives = 213/413 (51%), Gaps = 13/413 (3%)

Query: 75  ISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIK 134
           I ++N L   + K        + ++K++  GL P  ++ N +I        G C +  + 
Sbjct: 453 IFTYNSLLSWLCKEGKMSEATTLWQKMLDKGLAPTKVSYNSMI-------LGHCRQGNLD 505

Query: 135 EATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIF 194
            A  +F +M+  G++P+VITY  L++G+ + G+   A  +  +MV    EN + S    F
Sbjct: 506 MAASVFSDMLDCGLKPNVITYSILMDGYFKNGDTEYAFYVFDRMVD---ENIVPSD---F 559

Query: 195 SYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEM 254
           +Y+I I+ LCK G   +A+++  +   +G  P  +   +++ GF   G+       + EM
Sbjct: 560 TYNIKINGLCKVGRTSEAQDMLKKFVEKGFVPVCLTYNSIMDGFIKEGSVSSALTAYREM 619

Query: 255 LDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRI 314
            + G  PN++T+  +I+  CK    + A  +   M  +GL  D   Y +L+DG+C    I
Sbjct: 620 CESGVSPNVITYTTLINGFCKNNNTDLALKMRNEMRNKGLELDIAAYGALIDGFCKKQDI 679

Query: 315 DTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTL 374
           +TA  +F  +   G     V YN LI+GY  + N+E A++L ++++  G+   + TY TL
Sbjct: 680 ETASWLFSELLDGGLSPNSVIYNSLISGYRNLNNMEAALNLQKRMLGEGISCDLQTYTTL 739

Query: 375 LSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKF 434
           + GL + G+   A  L+ EM    + PD+  Y +LI+GLC    ++ A K+   +E +  
Sbjct: 740 IDGLLKEGRLVLALDLYSEMSAKGIIPDIIIYTVLINGLCGKGQLENAQKILAEMERDSI 799

Query: 435 EFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKG 487
              + I+N LI G  KAG L  A+ L +++  KGL P   TY I+I+G  + G
Sbjct: 800 TPNVPIYNALIAGHFKAGNLQEAFRLHNEMLDKGLTPNDTTYDILINGKIKGG 852



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 115/424 (27%), Positives = 197/424 (46%), Gaps = 9/424 (2%)

Query: 146 FGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCK 205
           F    D+  Y  L+N + +   L+ A+    ++V  D    ++      ++  ++ +L K
Sbjct: 168 FDFDSDIRIYNYLLNSYIKANKLNDAIGCFNRLVESD----IVPWIKFLNF--LLTALVK 221

Query: 206 EGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLT 265
             ++ +A+E++ +M  +G++        ++       N EE    F+E    G + +   
Sbjct: 222 NDMIYEAREVYEKMVLKGVHGDCFTVHIMMRANLKDNNEEEAKKFFLEAKSRGVKLDAAA 281

Query: 266 FNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMH 325
           ++++I   CK   +  A GLL+ M  +G  P   T+ S++      G +  A  +   M 
Sbjct: 282 YSIVIQAFCKNLDVELACGLLKDMRDKGWVPSEGTFTSVIGACVKQGNMVEALRLKDEMV 341

Query: 326 SKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAG 385
           S G +  VV    L+ GYCK   +  A+  + ++  NG     +TY  L+    + G   
Sbjct: 342 SCGVQMNVVVATTLVKGYCKQDKLVSALEFFDKMNENGPSPNRVTYAVLIEWCCKNGNMA 401

Query: 386 YAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLI 445
            A  L+ +MK  N+ P +   N LI G  K    +EA KLF           I  +N L+
Sbjct: 402 KAYDLYTQMKNKNICPTVFIVNSLIRGFLKVESREEASKLFDEAVACDIA-NIFTYNSLL 460

Query: 446 DGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCA 505
             LCK G++  A  L+ K+  KGL PT V+Y+ MI G CR+G L+ A      M   G  
Sbjct: 461 SWLCKEGKMSEATTLWQKMLDKGLAPTKVSYNSMILGHCRQGNLDMAASVFSDMLDCGLK 520

Query: 506 PNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECS 565
           PNV+T++ LM G+ +N  T     +  +M +   N+VP D T++I ++ L K  +  E  
Sbjct: 521 PNVITYSILMDGYFKNGDTEYAFYVFDRMVD--ENIVPSDFTYNIKINGLCKVGRTSEAQ 578

Query: 566 AVSK 569
            + K
Sbjct: 579 DMLK 582



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 117/428 (27%), Positives = 199/428 (46%), Gaps = 9/428 (2%)

Query: 131 NRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISK 190
           N++ +A   F  ++   + P +     L+    +   +  A  +++KMV           
Sbjct: 188 NKLNDAIGCFNRLVESDIVPWIKFLNFLLTALVKNDMIYEAREVYEKMVLKGVHG----- 242

Query: 191 TNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGL 250
            + F+  I++ +  K+   ++AK+ FLE K RG+       + +I  FC   + E   GL
Sbjct: 243 -DCFTVHIMMRANLKDNNEEEAKKFFLEAKSRGVKLDAAAYSIVIQAFCKNLDVELACGL 301

Query: 251 FIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCL 310
             +M D G  P+  TF  +I    K G + EA  L + M+  G+  +     +L+ GYC 
Sbjct: 302 LKDMRDKGWVPSEGTFTSVIGACVKQGNMVEALRLKDEMVSCGVQMNVVVATTLVKGYCK 361

Query: 311 VGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVIT 370
             ++ +A E F  M+  G     V+Y +LI   CK  N+ +A  LY Q+ +  +  TV  
Sbjct: 362 QDKLVSALEFFDKMNENGPSPNRVTYAVLIEWCCKNGNMAKAYDLYTQMKNKNICPTVFI 421

Query: 371 YNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLE 430
            N+L+ G  +      A KLFDE    ++  ++ TYN L+  LCK   + EA  L+  + 
Sbjct: 422 VNSLIRGFLKVESREEASKLFDEAVACDI-ANIFTYNSLLSWLCKEGKMSEATTLWQKML 480

Query: 431 MNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLE 490
                     +N +I G C+ G LD A  +F  +   GL P V+TYSI++ G  + G  E
Sbjct: 481 DKGLAPTKVSYNSMILGHCRQGNLDMAASVFSDMLDCGLKPNVITYSILMDGYFKNGDTE 540

Query: 491 KANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSI 550
            A      M      P+  T+N  ++G  +  +TS+  ++L K    E+  VP   T++ 
Sbjct: 541 YAFYVFDRMVDENIVPSDFTYNIKINGLCKVGRTSEAQDMLKKFV--EKGFVPVCLTYNS 598

Query: 551 VVDLLAKD 558
           ++D   K+
Sbjct: 599 IMDGFIKE 606


>gi|147789724|emb|CAN67401.1| hypothetical protein VITISV_025967 [Vitis vinifera]
          Length = 592

 Score =  235 bits (600), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 149/524 (28%), Positives = 255/524 (48%), Gaps = 54/524 (10%)

Query: 11  FSSETVSKVKLSSLFKSPRQIAAVSSPETQLNEFLHENCKSGIINLNEARYFF------G 64
           ++S    KV +S+  + P  + +    ET L + L+ +CK+G    NE+ YF       G
Sbjct: 52  YNSRNSPKVGVSAEAR-PAHLQSYDFRETHLMKLLNRSCKAG--KFNESLYFLECLVNKG 108

Query: 65  YMTHM----------------------------QPSPPISSFNLLFGAVAKNRHYDAVIS 96
           Y   +                               P + ++N +     K    +A   
Sbjct: 109 YTPDVILCTKLIKGFFNFKNIEKASRVMEILESHTEPDVFAYNAVISGFCKVNQIEAATQ 168

Query: 97  FYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYG 156
              ++ + G LPD +T NI+I         LC   ++  A  +   ++     P VITY 
Sbjct: 169 VLNRMKARGFLPDIVTYNIMIG-------SLCNRRKLGLALTVLDQLLLDNCMPTVITYT 221

Query: 157 TLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELF 216
            LI      G ++ A++L ++M++     GL+   ++++Y+ II  +CKEG+V++A EL 
Sbjct: 222 ILIEATIVEGGINEAMKLLEEMLA----RGLLP--DMYTYNAIIRGMCKEGMVERAAELI 275

Query: 217 LEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKG 276
             +  +G  P V+    L+  F   G W+E   L  EM   G  PN +T++++I  LC+ 
Sbjct: 276 TSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRF 335

Query: 277 GKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSY 336
           G+I+EA  +L++MI++ L PD ++Y+ L+   C  GR+D A  I   M S GC   +V+Y
Sbjct: 336 GRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNY 395

Query: 337 NILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKL 396
           N ++   CK  N  +A+ ++ ++   G    V +YNT++S L+  G    A  +   M  
Sbjct: 396 NTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMIS 455

Query: 397 YNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDN 456
             ++PD  TYN LI  LC++  V+EA+ L   +E + F   +  +N ++ GLCK  R+D+
Sbjct: 456 KGIDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDD 515

Query: 457 AWELFHKLPQKGLVPTVVTYSIMIHGL----CRKGKLEKANDFL 496
           A  +F ++ +KG  P   TY ++I G+     R   +E AN   
Sbjct: 516 AIGMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEAMELANSLF 559



 Score =  113 bits (282), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 87/321 (27%), Positives = 146/321 (45%), Gaps = 50/321 (15%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
           N  +   CK G++    A      +T     P + S+N+L  A      +D       ++
Sbjct: 256 NAIIRGMCKEGMVE--RAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEM 313

Query: 102 VSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLING 161
            S G  P+ +T +ILI+        LC   RI EA  + K MI   + PD  +Y  LI+ 
Sbjct: 314 FSRGCEPNKVTYSILIS-------SLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISA 366

Query: 162 FCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKG 221
            C+ G L +A+ +   M+S    NG +   +I +Y+ I+ +LCK G  ++A E+F +++G
Sbjct: 367 LCKEGRLDLAIGIMDYMIS----NGCLP--DIVNYNTILAALCKNGNANQALEIFNKLRG 420

Query: 222 -----------------------------------RGINPAVVVCTTLIHGFCCAGNWEE 246
                                              +GI+P  +   +LI   C  G  EE
Sbjct: 421 MGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGIDPDEITYNSLISCLCRDGLVEE 480

Query: 247 VNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMD 306
             GL  +M   G RP ++++N+++  LCK  +I++A G+   MI++G  P+  TY  L++
Sbjct: 481 AIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIE 540

Query: 307 GYCLVGRIDTAREIFLSMHSK 327
           G    G    A E+  S+ S+
Sbjct: 541 GIGFAGWRTEAMELANSLFSR 561


>gi|302757207|ref|XP_002962027.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
 gi|300170686|gb|EFJ37287.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
          Length = 814

 Score =  235 bits (600), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 159/563 (28%), Positives = 259/563 (46%), Gaps = 79/563 (14%)

Query: 72  SPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCF---GNKE---- 124
           +P   SFN+L  + A+ R  D  ++ +  +      PD  T  IL++C    G  E    
Sbjct: 151 APNTFSFNILIRSFARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFE 210

Query: 125 ----------------------RGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGF 162
                                 R L    R+KEA  +F  M   G  PD I Y T+I+G 
Sbjct: 211 VFHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGL 270

Query: 163 CRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGR 222
            + G+   AL++   M++          T + +Y I+++SLCK G +++A+ELF  M   
Sbjct: 271 AKAGHAQEALKVLDNMLAK-----ACVPTEV-TYGILVNSLCKAGTLERAEELFRVMAAS 324

Query: 223 GINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEA 282
           G  P  V+ T+LIHGF  +G  +E   LF EM++ G RP+++T  VMID LCK G   +A
Sbjct: 325 GFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQA 384

Query: 283 NGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILING 342
               E M++ G  P+  TY +++ G   +GR+  A  I   M + GC    V+Y  L++G
Sbjct: 385 AKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDG 444

Query: 343 YCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGL-------------FQAGQAGY--- 386
           +CK+  ++EA  L  ++        +  Y++L+ GL             F+  +A     
Sbjct: 445 FCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVKGLCDGGSVENTLDDLFEQSKAAAENL 504

Query: 387 --------------------AQKLFDEMKLYNVEPDLSTYNILIDGLCKN--NCVQEAVK 424
                               A ++F  M     +PD +TYNILI+GLC++  N V+ A  
Sbjct: 505 DPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFA 564

Query: 425 LFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLC 484
           L H LEM  +      +  L  GLCK G +D A ++  +   +G    VV Y+ +  GLC
Sbjct: 565 LLHDLEMVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLC 624

Query: 485 RKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPD 544
            +G++++A      M + G AP+   +  +++G ++  K     +   +M    +   P 
Sbjct: 625 YQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKGKKLEDACKFFDEMIGKGQK--PT 682

Query: 545 DTTFSIVVDLLAK----DEKYHE 563
             T++ +V  L      DE +H 
Sbjct: 683 VATYTALVQALCHAGNVDEAFHR 705



 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 166/573 (28%), Positives = 244/573 (42%), Gaps = 75/573 (13%)

Query: 55  NLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLN 114
            + EAR  FG M      P   ++N +   +AK  H    +     +++   +P  +T  
Sbjct: 240 RVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYG 299

Query: 115 ILINCF---GNKER-------------------------GLCVENRIKEATWLFKNMIAF 146
           IL+N     G  ER                         G     R+KEA  LF  M+  
Sbjct: 300 ILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEA 359

Query: 147 GVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKE 206
           G RPDVIT+  +I+G C++GN   A +  ++M+ G        K N+ +Y+ II  L K 
Sbjct: 360 GYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGG------CKPNVVTYTTIIQGLSKI 413

Query: 207 GLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTF 266
           G V  A  +   M   G  P  V    L+ GFC  G  +E   L  E+      PNL  +
Sbjct: 414 GRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLY 473

Query: 267 NVMIDCLCKGGKI-NEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMH 325
           + ++  LC GG + N  + L E       N D     S++ G C  GR+D A  IF  M 
Sbjct: 474 SSLVKGLCDGGSVENTLDDLFEQSKAAAENLDPGLCCSIIVGLCKTGRLDEACRIFQRMV 533

Query: 326 SKGCKHTVVSYNILINGYC-------------------------------------KILN 348
           S+GCK    +YNILING C                                     KI  
Sbjct: 534 SEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEMVGYLPDAVTYTPLCIGLCKIGE 593

Query: 349 VEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNI 408
           V+ A+ +  +  S G    V+ Y  L +GL   GQ   A  LF EM      PD + Y  
Sbjct: 594 VDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCC 653

Query: 409 LIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKG 468
           +I+GL K   +++A K F  +     +  +  +  L+  LC AG +D A+  F  +  +G
Sbjct: 654 IINGLIKGKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFEGMLARG 713

Query: 469 -LVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKV 527
            LV +V+ Y  +IHG C+  K++ A      M   G  P  VT  +L  G +++ KT K 
Sbjct: 714 ELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKA 773

Query: 528 VELLHKMAEPERNLVPDDTTFSIVVDLLAKDEK 560
            ELL +MA       P   TF+ ++D L K ++
Sbjct: 774 QELLQEMAAG--GSPPHAATFTAILDGLRKSDE 804



 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 144/494 (29%), Positives = 242/494 (48%), Gaps = 19/494 (3%)

Query: 44  FLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVS 103
            +H   KSG   + EA   F  M      P + +  ++   + K+ +++     + +++ 
Sbjct: 336 LIHGFAKSG--RMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMR 393

Query: 104 IGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFC 163
            G  P+ +T   +I       +GL    R+  A  + K MIA G  PD +TY  L++GFC
Sbjct: 394 GGCKPNVVTYTTII-------QGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFC 446

Query: 164 RTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKA-KELFLEMKGR 222
           + G L  A +L  ++      +   S  N+  YS ++  LC  G V+    +LF + K  
Sbjct: 447 KLGRLDEAAQLLDEL------DKCSSSPNLQLYSSLVKGLCDGGSVENTLDDLFEQSKAA 500

Query: 223 GINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKG--GKIN 280
             N    +C ++I G C  G  +E   +F  M+  G +P+  T+N++I+ LC+    ++ 
Sbjct: 501 AENLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVE 560

Query: 281 EANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILI 340
            A  LL  +   G  PD  TY  L  G C +G +D A ++     S+G    VV+Y  L 
Sbjct: 561 RAFALLHDLEMVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALC 620

Query: 341 NGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVE 400
            G C    V+ A+SL+++++  G       Y  +++GL +  +   A K FDEM     +
Sbjct: 621 TGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKGKKLEDACKFFDEMIGKGQK 680

Query: 401 PDLSTYNILIDGLCKNNCVQEAVKLFH-MLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWE 459
           P ++TY  L+  LC    V EA   F  ML   +    + I++ LI G CKA ++D A +
Sbjct: 681 PTVATYTALVQALCHAGNVDEAFHRFEGMLARGELVGSVMIYDALIHGFCKALKVDAALK 740

Query: 460 LFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFL 519
           LF  +  +G VPT VT + +  GL R GK EKA + L  M   G  P+  TF  ++ G  
Sbjct: 741 LFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAATFTAILDGLR 800

Query: 520 QNNKTSKVVELLHK 533
           +++++ K+++L+ +
Sbjct: 801 KSDESGKLLKLVQE 814



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 116/409 (28%), Positives = 196/409 (47%), Gaps = 7/409 (1%)

Query: 147 GVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKE 206
           G + DV TY  L+N      N S    +H++M+            N FS++I+I S  + 
Sbjct: 114 GFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGI------APNTFSFNILIRSFART 167

Query: 207 GLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLG-PRPNLLT 265
              D A   F  MK +   P +     L+   C AG  E+   +F EM+ +G   P+   
Sbjct: 168 RRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRAL 227

Query: 266 FNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMH 325
              M+  L K  ++ EA  +   M + G  PD   YN+++DG    G    A ++  +M 
Sbjct: 228 HTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNML 287

Query: 326 SKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAG 385
           +K C  T V+Y IL+N  CK   +E A  L+R + ++G R   + Y +L+ G  ++G+  
Sbjct: 288 AKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMK 347

Query: 386 YAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLI 445
            A  LFDEM      PD+ T+ ++IDGLCK+   ++A K F  +     +  +  +  +I
Sbjct: 348 EACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTII 407

Query: 446 DGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCA 505
            GL K GR+ NA+ +   +   G  P  VTY  ++ G C+ G+L++A   L  ++K   +
Sbjct: 408 QGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSS 467

Query: 506 PNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDL 554
           PN+  +++L+ G          ++ L + ++     +      SI+V L
Sbjct: 468 PNLQLYSSLVKGLCDGGSVENTLDDLFEQSKAAAENLDPGLCCSIIVGL 516



 Score = 46.6 bits (109), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 30/139 (21%), Positives = 59/139 (42%), Gaps = 3/139 (2%)

Query: 430 EMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKL 489
           E   F+  +  +NCL++ L         + +  ++ + G+ P   +++I+I    R  + 
Sbjct: 111 EQAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRA 170

Query: 490 EKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTF- 548
           + A      M++  C P++ TF  L+    +     K  E+ H+M       VP D    
Sbjct: 171 DDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMM--AMGFVPPDRALH 228

Query: 549 SIVVDLLAKDEKYHECSAV 567
           + +V  L K ++  E   V
Sbjct: 229 TAMVRTLLKAKRVKEAREV 247


>gi|356554658|ref|XP_003545661.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Glycine max]
          Length = 675

 Score =  235 bits (600), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 148/475 (31%), Positives = 246/475 (51%), Gaps = 14/475 (2%)

Query: 86  AKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIA 145
           AK    +  +  + K+VS G+LPD    N ++    +++  + V      A  ++  M+ 
Sbjct: 130 AKKSMLEKCLLVFYKMVSKGMLPDLKNCNRVLRLLRDRDSSIDV------AREVYNVMVE 183

Query: 146 FGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCK 205
            G+RP V+TY T+++ FC+ G +  AL+L  +M        +    N  +Y+++++ L  
Sbjct: 184 CGIRPTVVTYNTMLDSFCKQGKVQEALQLLLQM------QKMGCLPNDVTYNVLVNGLSH 237

Query: 206 EGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLT 265
            G +++AKEL  EM   G+  +      LI G+C  G  +E + L  EML  G  P L+T
Sbjct: 238 SGELEQAKELIQEMLRLGLEVSAYTYDPLIRGYCEKGQLDEASRLGEEMLSRGAVPTLVT 297

Query: 266 FNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMH 325
           +N ++  LCK G++++A  LL++M+ + L PD  +YN+L+ GY  +G I  A  +F  + 
Sbjct: 298 YNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELR 357

Query: 326 SKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAG 385
            +G   +VV+YN LI+G C++ +++ AM L  ++I +G    V T+  L+ G  + G   
Sbjct: 358 FRGLVPSVVTYNTLIDGLCRMGDLDVAMRLKDEMIKHGPDPDVFTFTILVRGFCKLGNLP 417

Query: 386 YAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLI 445
            A++LFDEM    ++PD   Y   I G  K     +A  +   +    F   +  +N  I
Sbjct: 418 MAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFI 477

Query: 446 DGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCA 505
           DGL K G L  A EL  K+   GLVP  VTY+ +IH     G L KA    L M   G  
Sbjct: 478 DGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARAVFLEMLSKGIF 537

Query: 506 PNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEK 560
           P+VVT+  L+H +    +    + +LH     E+ + P+  T++ +++ L K  K
Sbjct: 538 PSVVTYTVLIHSYAVRGRLK--LAILHFFEMHEKGVHPNVITYNALINGLCKVRK 590



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 146/509 (28%), Positives = 252/509 (49%), Gaps = 17/509 (3%)

Query: 55  NLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLN 114
           +++ AR  +  M      P + ++N +  +  K       +    ++  +G LP+ +T N
Sbjct: 170 SIDVAREVYNVMVECGIRPTVVTYNTMLDSFCKQGKVQEALQLLLQMQKMGCLPNDVTYN 229

Query: 115 ILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRL 174
           +L+N       GL     +++A  L + M+  G+     TY  LI G+C  G L  A RL
Sbjct: 230 VLVN-------GLSHSGELEQAKELIQEMLRLGLEVSAYTYDPLIRGYCEKGQLDEASRL 282

Query: 175 HKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTL 234
            ++M+S     G +    + +Y+ I+  LCK G V  A++L   M  + + P +V   TL
Sbjct: 283 GEEMLS----RGAVP--TLVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTL 336

Query: 235 IHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGL 294
           I+G+   GN  E   LF E+   G  P+++T+N +ID LC+ G ++ A  L + MI+ G 
Sbjct: 337 IYGYTRLGNIGEAFLLFAELRFRGLVPSVVTYNTLIDGLCRMGDLDVAMRLKDEMIKHGP 396

Query: 295 NPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMS 354
           +PD FT+  L+ G+C +G +  A+E+F  M ++G +    +Y   I G  K+ +  +A  
Sbjct: 397 DPDVFTFTILVRGFCKLGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFG 456

Query: 355 LYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLC 414
           +  ++++ G    +ITYN  + GL + G    A +L  +M    + PD  TY  +I    
Sbjct: 457 MQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHL 516

Query: 415 KNNCVQEAVKLF-HMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTV 473
               +++A  +F  ML    F   +  +  LI      GRL  A   F ++ +KG+ P V
Sbjct: 517 MAGHLRKARAVFLEMLSKGIFP-SVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNV 575

Query: 474 VTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHK 533
           +TY+ +I+GLC+  K+++A  F   M+  G +PN  T+  L++         + + L   
Sbjct: 576 ITYNALINGLCKVRKMDQAYKFFTEMQAKGISPNKYTYTILINENCNLGHWQEALRLYKD 635

Query: 534 MAEPERNLVPDDTTFSIVVDLLAKDEKYH 562
           M   +R + PD  T S ++  L KD K H
Sbjct: 636 ML--DREIQPDSCTHSALLKHLNKDYKSH 662



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 143/501 (28%), Positives = 249/501 (49%), Gaps = 23/501 (4%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
           N  L   CK G   + EA      M  M   P   ++N+L   ++ +   +      +++
Sbjct: 194 NTMLDSFCKQG--KVQEALQLLLQMQKMGCLPNDVTYNVLVNGLSHSGELEQAKELIQEM 251

Query: 102 VSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLING 161
           + +GL     T + LI       RG C + ++ EA+ L + M++ G  P ++TY T++ G
Sbjct: 252 LRLGLEVSAYTYDPLI-------RGYCEKGQLDEASRLGEEMLSRGAVPTLVTYNTIMYG 304

Query: 162 FCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKG 221
            C+ G +S A +L   MV+ +    L+S      Y+ +I    + G + +A  LF E++ 
Sbjct: 305 LCKWGRVSDARKLLDVMVNKNLMPDLVS------YNTLIYGYTRLGNIGEAFLLFAELRF 358

Query: 222 RGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINE 281
           RG+ P+VV   TLI G C  G+ +    L  EM+  GP P++ TF +++   CK G +  
Sbjct: 359 RGLVPSVVTYNTLIDGLCRMGDLDVAMRLKDEMIKHGPDPDVFTFTILVRGFCKLGNLPM 418

Query: 282 ANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILIN 341
           A  L + M+ RGL PDRF Y + + G   +G    A  +   M ++G    +++YN+ I+
Sbjct: 419 AKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFID 478

Query: 342 GYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEP 401
           G  K+ N++EA  L ++++ NG+    +TY +++     AG    A+ +F EM    + P
Sbjct: 479 GLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARAVFLEMLSKGIFP 538

Query: 402 DLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIE----IFNCLIDGLCKAGRLDNA 457
            + TY +LI        ++ A+   H  EM+  E G+      +N LI+GLCK  ++D A
Sbjct: 539 SVVTYTVLIHSYAVRGRLKLAI--LHFFEMH--EKGVHPNVITYNALINGLCKVRKMDQA 594

Query: 458 WELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHG 517
           ++ F ++  KG+ P   TY+I+I+  C  G  ++A      M      P+  T + L+  
Sbjct: 595 YKFFTEMQAKGISPNKYTYTILINENCNLGHWQEALRLYKDMLDREIQPDSCTHSALLKH 654

Query: 518 FLQNNKTSKVVELLHKMAEPE 538
             ++ K+  V  L + +A  E
Sbjct: 655 LNKDYKSHVVRHLENVIAAGE 675



 Score =  191 bits (486), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 129/425 (30%), Positives = 215/425 (50%), Gaps = 6/425 (1%)

Query: 147 GVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKE 206
           G +   +TY  +++   R G +  A  + +K+VS   ENG++    +     I     K+
Sbjct: 76  GFKRSELTYAVILDILARNGLMRSAYCVMEKVVSVKMENGVVDVLILDLLLWIY---AKK 132

Query: 207 GLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEV-NGLFIEMLDLGPRPNLLT 265
            +++K   +F +M  +G+ P +  C  ++       +  +V   ++  M++ G RP ++T
Sbjct: 133 SMLEKCLLVFYKMVSKGMLPDLKNCNRVLRLLRDRDSSIDVAREVYNVMVECGIRPTVVT 192

Query: 266 FNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMH 325
           +N M+D  CK GK+ EA  LL  M + G  P+  TYN L++G    G ++ A+E+   M 
Sbjct: 193 YNTMLDSFCKQGKVQEALQLLLQMQKMGCLPNDVTYNVLVNGLSHSGELEQAKELIQEML 252

Query: 326 SKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAG 385
             G + +  +Y+ LI GYC+   ++EA  L  +++S G   T++TYNT++ GL + G+  
Sbjct: 253 RLGLEVSAYTYDPLIRGYCEKGQLDEASRLGEEMLSRGAVPTLVTYNTIMYGLCKWGRVS 312

Query: 386 YAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLI 445
            A+KL D M   N+ PDL +YN LI G  +   + EA  LF  L        +  +N LI
Sbjct: 313 DARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRFRGLVPSVVTYNTLI 372

Query: 446 DGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCA 505
           DGLC+ G LD A  L  ++ + G  P V T++I++ G C+ G L  A +    M   G  
Sbjct: 373 DGLCRMGDLDVAMRLKDEMIKHGPDPDVFTFTILVRGFCKLGNLPMAKELFDEMLNRGLQ 432

Query: 506 PNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECS 565
           P+   + T + G L+    SK   +  +M    R   PD  T+++ +D L K     E S
Sbjct: 433 PDRFAYITRIVGELKLGDPSKAFGMQEEML--ARGFPPDLITYNVFIDGLHKLGNLKEAS 490

Query: 566 AVSKS 570
            + K 
Sbjct: 491 ELVKK 495


>gi|218198940|gb|EEC81367.1| hypothetical protein OsI_24568 [Oryza sativa Indica Group]
          Length = 1380

 Score =  235 bits (600), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 155/515 (30%), Positives = 247/515 (47%), Gaps = 49/515 (9%)

Query: 57  NEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNIL 116
           ++AR  F  M H    P +++FN +  A+ K            K++  G+  +  T NI 
Sbjct: 169 HDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIW 228

Query: 117 INCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHK 176
           I       RGLC   R+ EA  L   M A+ V PDV+TY TLI G C+      A+   +
Sbjct: 229 I-------RGLCEAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLR 280

Query: 177 KMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIH 236
           +M++     G +   + F+Y+ IID  CK  +V +A EL  +   +G  P  V   +LI+
Sbjct: 281 RMMN----QGCLP--DDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLIN 334

Query: 237 GFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNP 296
           G C  G+ E    LF E    G +P+++ +N ++  LC  G I  A  ++  M + G +P
Sbjct: 335 GLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHP 394

Query: 297 DRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLY 356
           D  TYN +++G C +G I  A  +      KG    V ++N LI+GYCK L ++ A+ L 
Sbjct: 395 DIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLV 454

Query: 357 RQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKN 416
            ++   G+    ITYN++L+GL +AG+     + F EM L    P+  TYNILI+  C++
Sbjct: 455 ERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRS 514

Query: 417 NCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTV--- 473
           N ++EA K+   +           FN LI G C+ G L+ A+ LF KL +KG   T    
Sbjct: 515 NKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTF 574

Query: 474 --------------------------------VTYSIMIHGLCRKGKLEKANDFLLYMEK 501
                                            TY ++I G C+   +++A   L+ M K
Sbjct: 575 NTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIK 634

Query: 502 NGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAE 536
            G  P++ TF  +++    N++  + V ++H M +
Sbjct: 635 KGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVK 669



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 143/497 (28%), Positives = 251/497 (50%), Gaps = 20/497 (4%)

Query: 56  LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNI 115
           L +A   F  M      P   ++N +  A+    ++D     Y ++++ G+ PD  T  I
Sbjct: 67  LRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRMLAAGVSPDLHTHTI 126

Query: 116 LINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLH 175
            +       R  C+  R   A  L + +   G     + Y T++ G    G+   A +L 
Sbjct: 127 RL-------RSFCLTARPHIALRLLRALPHRGA----VAYCTVVCGLYAHGHTHDARQLF 175

Query: 176 KKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLI 235
            +M+            N+ +++ ++ +LCK G V +A  L  ++  RG++  +      I
Sbjct: 176 DQMLHTHV------FPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWI 229

Query: 236 HGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLN 295
            G C AG   E   L ++ +     P+++T+N +I  LCK     EA   L  M+ +G  
Sbjct: 230 RGLCEAGRLPEAVRL-VDGMRAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCL 288

Query: 296 PDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSL 355
           PD FTYN+++DGYC +  +  A E+      KG     V+Y  LING C   +VE A+ L
Sbjct: 289 PDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALEL 348

Query: 356 YRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCK 415
           + +  + G++  ++ YN+L+ GL   G   +A ++ +EM      PD+ TYNI+I+GLCK
Sbjct: 349 FNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCK 408

Query: 416 NNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVT 475
              + +A  + +   M  +   +  FN LIDG CK  +LD+A +L  ++ + G+ P  +T
Sbjct: 409 MGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTIT 468

Query: 476 YSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMA 535
           Y+ +++GLC+ GK+ + N+    M   GC PN +T+N L+  F ++NK  +  +++ KM+
Sbjct: 469 YNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMS 528

Query: 536 EPERNLVPDDTTFSIVV 552
             +  L PD  +F+ ++
Sbjct: 529 --QEGLHPDAVSFNTLI 543



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 108/397 (27%), Positives = 179/397 (45%), Gaps = 39/397 (9%)

Query: 195 SYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVV--VCTTLIHGFCCAGNWEEVNGLFI 252
           +Y  +I  L   G VD         + R ++PA +  +    I  +  AG   +    F 
Sbjct: 17  AYCALIRPLASAGRVDAVDAAVASARSR-LSPATIHPLYVASIRAYARAGRLRDAVDAFE 75

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
            M      P    +N ++D L      ++A+ +   M+  G++PD  T+   +  +CL  
Sbjct: 76  RMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRMLAAGVSPDLHTHTIRLRSFCLTA 135

Query: 313 R-------------------------------IDTAREIFLSMHSKGCKHTVVSYNILIN 341
           R                                  AR++F  M        + ++N +++
Sbjct: 136 RPHIALRLLRALPHRGAVAYCTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLH 195

Query: 342 GYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEP 401
             CK  +V EA  L  ++I  G+   + TYN  + GL +AG+   A +L D M+ Y V P
Sbjct: 196 ALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAV-P 254

Query: 402 DLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEI-FNCLIDGLCKAGRLDNAWEL 460
           D+ TYN LI GLCK +  QEA+     + MN+     +  +N +IDG CK   +  A EL
Sbjct: 255 DVVTYNTLIRGLCKKSMPQEAMHYLRRM-MNQGCLPDDFTYNTIIDGYCKISMVQEATEL 313

Query: 461 FHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQ 520
                 KG VP  VTY  +I+GLC +G +E+A +     +  G  P++V +N+L+ G   
Sbjct: 314 LKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCL 373

Query: 521 NNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAK 557
                  ++++++MA  E    PD  T++IV++ L K
Sbjct: 374 QGLILHALQVMNEMA--EEGCHPDIQTYNIVINGLCK 408


>gi|115459104|ref|NP_001053152.1| Os04g0488500 [Oryza sativa Japonica Group]
 gi|113564723|dbj|BAF15066.1| Os04g0488500 [Oryza sativa Japonica Group]
          Length = 801

 Score =  235 bits (600), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 161/552 (29%), Positives = 265/552 (48%), Gaps = 67/552 (12%)

Query: 41  LNEFLHENCKSGIINLNEARYFFGY-----MTHMQPSPPISSFNLLFGAVAKNRHYDAVI 95
            N  +H  C       NE  Y + Y     MT     P    +N+  G++          
Sbjct: 180 FNSLVHSYC-------NEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQE------ 226

Query: 96  SFYRKLVSIGLLPDFLTLN-------ILINCFGNK------ERGLCVENRIKEATWLFKN 142
               KL S    PD L L        +  NC  NK       R LC   +  +A  L K 
Sbjct: 227 ----KLPS----PDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKE 278

Query: 143 MIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKT-NIFSYSIIID 201
           M+  G  PD  TY  +I   C    +  A  L ++M        ++  T ++++Y+I+ID
Sbjct: 279 MMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEM-------KMVGVTPDVYTYTILID 331

Query: 202 SLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRP 261
           S CK GL+++A+ LF EM+  G +P VV  T LIH +  A    + N +F  M+D G RP
Sbjct: 332 SFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRP 391

Query: 262 NLLTFNVMIDCLCKGGKINEANGLLELMI----------------QRGLNPDRFTYNSLM 305
           N +T+  ++D LCK G I++A  +   +I                +  L P+  TY +L+
Sbjct: 392 NDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALV 451

Query: 306 DGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVR 365
           DG C   ++D A E+  +M S GC+   + Y+ LI+G+CK   ++ A  ++ Q+   G  
Sbjct: 452 DGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYL 511

Query: 366 QTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKL 425
            +V TY +L+  +F+ G+   A K+  +M   +  P++ TY  +IDGLC+    ++A+KL
Sbjct: 512 PSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKL 571

Query: 426 FHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCR 485
             ++E       +  +  LIDGL KAG++D + +LF ++ +KG  P  VTY ++I+ LC 
Sbjct: 572 LSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCA 631

Query: 486 KGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDD 545
            G L+KA   L  M++      +  +   + GF ++   S  + +L +M       VP  
Sbjct: 632 AGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIAS--LGILEEM--ESYGTVPIA 687

Query: 546 TTFSIVVDLLAK 557
             + +++D  +K
Sbjct: 688 PVYGMLIDCFSK 699



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 145/527 (27%), Positives = 242/527 (45%), Gaps = 62/527 (11%)

Query: 81  LFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKER--------------- 125
           +   + +  ++D  +SF  ++     +P+ +T   L++ F  K++               
Sbjct: 113 MISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEG 172

Query: 126 -------------GLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGN----- 167
                          C E     A  L   M   G  P  + Y   I   C         
Sbjct: 173 CNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPD 232

Query: 168 -LSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINP 226
            L +A +++ +M++    N +++K N+ +++     LC  G  DKA +L  EM  +G  P
Sbjct: 233 LLDLAEKIYGEMLAA---NCVLNKVNVANFA---RCLCGVGKFDKAFQLIKEMMRKGFVP 286

Query: 227 AVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLL 286
                + +I   C A   E+   LF EM  +G  P++ T+ ++ID  CK G I +A  L 
Sbjct: 287 DTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLF 346

Query: 287 ELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKI 346
           E M   G +P   TY +L+  Y    ++  A +IF  M   GC+   V+Y  L++G CK 
Sbjct: 347 EEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKA 406

Query: 347 LNVEEAMSLYRQIISNG----------------VRQTVITYNTLLSGLFQAGQAGYAQKL 390
            N+ +A  +Y ++I                   +   V+TY  L+ GL +A +  +A +L
Sbjct: 407 GNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHEL 466

Query: 391 FDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEF--GIEIFNCLIDGL 448
            D M     EP+   Y+ LIDG CK   +  A ++F  L+M K  +   +  +  LID +
Sbjct: 467 LDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVF--LQMTKCGYLPSVHTYTSLIDRM 524

Query: 449 CKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNV 508
            K GRLD A ++  ++ +    P VVTY+ MI GLCR G+ EKA   L  ME+ GC+PNV
Sbjct: 525 FKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNV 584

Query: 509 VTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLL 555
           VT+  L+ G  +  K    ++L  +M+   +   P+  T+ ++++ L
Sbjct: 585 VTYTALIDGLGKAGKIDLSLDLFTQMS--RKGCSPNYVTYRVLINHL 629



 Score =  196 bits (497), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 135/486 (27%), Positives = 231/486 (47%), Gaps = 53/486 (10%)

Query: 126 GLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGD--- 182
           GL   +   EA      M      P+V+TY TL++GF +   L    R+   M++     
Sbjct: 116 GLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNP 175

Query: 183 -------------------YENGLISKTNI-------FSYSIIIDSLCKE------GLVD 210
                              Y   L+++            Y+I I S+C +       L+D
Sbjct: 176 NPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLD 235

Query: 211 KAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMI 270
            A++++ EM         V         C  G +++   L  EM+  G  P+  T++ +I
Sbjct: 236 LAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVI 295

Query: 271 DCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCK 330
             LC   K+ +A  L + M   G+ PD +TY  L+D +C  G I+ A+ +F  M S GC 
Sbjct: 296 TFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCS 355

Query: 331 HTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKL 390
            TVV+Y  LI+ Y K   V +A  ++ +++  G R   +TY  L+ GL +AG    A ++
Sbjct: 356 PTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEV 415

Query: 391 FDEM----------------KLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKF 434
           + ++                  + + P++ TY  L+DGLCK + V  A +L   +  +  
Sbjct: 416 YAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGC 475

Query: 435 EFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKAND 494
           E    +++ LIDG CKAG++D+A E+F ++ + G +P+V TY+ +I  + + G+L+ A  
Sbjct: 476 EPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMK 535

Query: 495 FLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDL 554
            L  M K+ C PNVVT+  ++ G  +  ++ K ++LL  M   E+   P+  T++ ++D 
Sbjct: 536 VLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLM--EEKGCSPNVVTYTALIDG 593

Query: 555 LAKDEK 560
           L K  K
Sbjct: 594 LGKAGK 599



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 124/483 (25%), Positives = 223/483 (46%), Gaps = 52/483 (10%)

Query: 55  NLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLN 114
            + +A   F  M  +  +P + ++ +L  +  K    +     + ++ S+G  P  +T  
Sbjct: 303 KVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYT 362

Query: 115 ILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRL 174
            LI+ +   ++       + +A  +F  M+  G RP+ +TYG L++G C+ GN+S A  +
Sbjct: 363 ALIHAYLKAKQ-------VPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEV 415

Query: 175 HKKMV----SGDY------ENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGI 224
           + K++    S D       E+      N+ +Y  ++D LCK   VD A EL   M   G 
Sbjct: 416 YAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGC 475

Query: 225 NPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANG 284
            P  +V   LI GFC AG  +    +F++M   G  P++ T+  +ID + K G+++ A  
Sbjct: 476 EPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMK 535

Query: 285 LLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYC 344
           +L  M++    P+  TY +++DG C +G  + A ++   M  KGC   VV+Y  LI+G  
Sbjct: 536 VLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLG 595

Query: 345 KILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLS 404
           K   ++ ++ L+ Q+   G     +TY  L++ L  AG    A+ L  EMK       L 
Sbjct: 596 KAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQ 655

Query: 405 TYNILIDGLCKN---------------------------NCVQEAVKLFHMLEMNKFEFG 437
            Y   I G  K+                           +C  +A +L   +E++K    
Sbjct: 656 GYRCAIQGFSKSFIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMME 715

Query: 438 I--------EIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKL 489
           +        +++  LI  LC A +++ A+ L+ ++ ++G VP +  +  +I GL    K 
Sbjct: 716 VPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKW 775

Query: 490 EKA 492
           ++A
Sbjct: 776 DEA 778



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 117/437 (26%), Positives = 189/437 (43%), Gaps = 33/437 (7%)

Query: 146 FGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCK 205
           FG RP  +TY  L+      G + +  R+ K+M     E+G     + F+      +LCK
Sbjct: 34  FGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMS----ESGFC--MDRFTVGCFAHALCK 87

Query: 206 EGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLT 265
           EG    A ++   ++        V+CT +I G   A  ++E       M      PN++T
Sbjct: 88  EGRWADALDM---IEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVT 144

Query: 266 FNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMH 325
           +  ++    K  ++     ++ +M+  G NP+   +NSL+  YC       A ++   M 
Sbjct: 145 YRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMT 204

Query: 326 SKGCKHTVVSYNILINGYC--------KILNVEEAMSLYRQIISNGVRQTVITYNTLLSG 377
           + GC    V YNI I   C         +L++ E   +Y ++++       +        
Sbjct: 205 TCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAE--KIYGEMLAANCVLNKVNVANFARC 262

Query: 378 LFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFG 437
           L   G+   A +L  EM      PD STY+ +I  LC    V++A  LF  ++M      
Sbjct: 263 LCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPD 322

Query: 438 IEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLL 497
           +  +  LID  CKAG ++ A  LF ++   G  PTVVTY+ +IH   +  ++ +AND   
Sbjct: 323 VYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFH 382

Query: 498 YMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKM--------------AEPERNLVP 543
            M   GC PN VT+  L+ G  +    SK  E+  K+               E    L P
Sbjct: 383 RMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAP 442

Query: 544 DDTTFSIVVDLLAKDEK 560
           +  T+  +VD L K  K
Sbjct: 443 NVVTYGALVDGLCKAHK 459



 Score =  115 bits (289), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 95/385 (24%), Positives = 157/385 (40%), Gaps = 95/385 (24%)

Query: 256 DLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRID 315
           D G RP+ +T+N ++  L   G+++    + + M + G   DRFT        C  GR  
Sbjct: 33  DFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGRWA 92

Query: 316 TA-----REIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVIT 370
            A     RE F  + +  C H       +I+G  +    +EAMS   ++  N     V+T
Sbjct: 93  DALDMIEREDF-KLDTVLCTH-------MISGLMEASYFDEAMSFLHRMRCNSCIPNVVT 144

Query: 371 YNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNN------------- 417
           Y TLLSG  +  Q G+ +++ + M      P+ S +N L+   C                
Sbjct: 145 YRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMT 204

Query: 418 ------------------CVQEAVKLFHMLEMNKFEFG-IEIFNCLIDG---------LC 449
                             C QE +    +L++ +  +G +   NC+++          LC
Sbjct: 205 TCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLC 264

Query: 450 KAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKN------- 502
             G+ D A++L  ++ +KG VP   TYS +I  LC   K+EKA  FLL+ E         
Sbjct: 265 GVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKA--FLLFQEMKMVGVTPD 322

Query: 503 ------------------------------GCAPNVVTFNTLMHGFLQNNKTSKVVELLH 532
                                         GC+P VVT+  L+H +L+  +  +  ++ H
Sbjct: 323 VYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFH 382

Query: 533 KMAEPERNLVPDDTTFSIVVDLLAK 557
           +M +      P+D T+  +VD L K
Sbjct: 383 RMVDA--GCRPNDVTYGALVDGLCK 405



 Score = 52.4 bits (124), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 70/311 (22%), Positives = 114/311 (36%), Gaps = 73/311 (23%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CK+G I+   A+  F  MT     P + ++  L   + K+   D  +    +++     P
Sbjct: 490 CKAGKID--SAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTP 547

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           + +T   +I+       GLC     ++A  L   M   G  P+V+TY  LI+G  + G +
Sbjct: 548 NVVTYTAMID-------GLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKI 600

Query: 169 SVAL----RLHKKMVSGDY-----------ENGLISKTNI-------------------- 193
            ++L    ++ +K  S +Y             GL+ K  +                    
Sbjct: 601 DLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCA 660

Query: 194 ---FS------------------------YSIIIDSLCKEGLVDKAKELFLEMK--GRGI 224
              FS                        Y ++ID   K G ++ A EL  EM      +
Sbjct: 661 IQGFSKSFIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSV 720

Query: 225 NPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANG 284
                +  +LI   C A   EE   L+ EM   G  P L  F  +I  L +  K +EA  
Sbjct: 721 KTDNDMYASLIQALCLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEALQ 780

Query: 285 LLELMIQRGLN 295
           L   +   G+N
Sbjct: 781 LCYGICHEGVN 791


>gi|55709857|gb|AAV58825.1| hypothetical protein [Arabidopsis thaliana]
          Length = 946

 Score =  235 bits (599), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 147/540 (27%), Positives = 262/540 (48%), Gaps = 62/540 (11%)

Query: 71  PSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCF-GNKE----- 124
           PSP I  FN L  A   +  +       +K+V  G +P ++  NILI    G+K+     
Sbjct: 329 PSPKI--FNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNFD 386

Query: 125 ----------------------------RGLCVENRIKEATWLFKNMIAFGVRPDVITYG 156
                                       R LC   + ++A  + + MI  G  PD  TY 
Sbjct: 387 LLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYS 446

Query: 157 TLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELF 216
            ++N  C    + +A  L ++M  G    GL++  ++++Y+I++DS CK GL+++A++ F
Sbjct: 447 KVLNYLCNASKMELAFLLFEEMKRG----GLVA--DVYTYTIMVDSFCKAGLIEQARKWF 500

Query: 217 LEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKG 276
            EM+  G  P VV  T LIH +  A      N LF  ML  G  PN++T++ +ID  CK 
Sbjct: 501 NEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKA 560

Query: 277 GKINEANGLLELMI----------------QRGLNPDRFTYNSLMDGYCLVGRIDTAREI 320
           G++ +A  + E M                      P+  TY +L+DG+C   R++ AR++
Sbjct: 561 GQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKL 620

Query: 321 FLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQ 380
             +M  +GC+   + Y+ LI+G CK+  ++EA  +  ++  +G   T+ TY++L+   F+
Sbjct: 621 LDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFK 680

Query: 381 AGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEI 440
             +   A K+  +M   +  P++  Y  +IDGLCK     EA KL  M+E    +  +  
Sbjct: 681 VKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVT 740

Query: 441 FNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYME 500
           +  +IDG    G+++   EL  ++  KG+ P  VTY ++I   C+ G L+ A++ L  M+
Sbjct: 741 YTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMK 800

Query: 501 KNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEK 560
           +     +   +  ++ GF  N +  + + LL ++ +   +  P  + + +++D L K ++
Sbjct: 801 QTHWPTHTAGYRKVIEGF--NKEFIESLGLLDEIGQD--DTAPFLSVYRLLIDNLIKAQR 856



 Score =  228 bits (580), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 166/619 (26%), Positives = 280/619 (45%), Gaps = 88/619 (14%)

Query: 3   SRTQFRCLFSS-ETVSKVKLSSLFKSPRQIAAVSSPETQLNEFLHENCKSG----IINLN 57
           SR+ + CL  +     ++  +SL      +A +      L  F +  CK G     + L 
Sbjct: 193 SRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREALTLV 252

Query: 58  EARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILI 117
           E   F          P    +  L   + +   ++  + F  ++ +   LP+ +T + L+
Sbjct: 253 ETENFV---------PDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLL 303

Query: 118 -NCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHK 176
             C   K+ G C          +   M+  G  P    + +L++ +C +G+ S A +L K
Sbjct: 304 CGCLNKKQLGRC--------KRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLK 355

Query: 177 KMVSGDYENGLISKTNIFSYSIIIDSLCKE------GLVDKAKELFLEMKGRGINPAVVV 230
           KMV   +  G +       Y+I+I S+C +       L+D A++ + EM   G+    + 
Sbjct: 356 KMVKCGHMPGYV------VYNILIGSICGDKDSLNFDLLDLAEKAYSEMLAAGVVLNKIN 409

Query: 231 CTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMI 290
            ++     C AG +E+   +  EM+  G  P+  T++ +++ LC   K+  A  L E M 
Sbjct: 410 VSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMK 469

Query: 291 QRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVE 350
           + GL  D +TY  ++D +C  G I+ AR+ F  M   GC   VV+Y  LI+ Y K   V 
Sbjct: 470 RGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVS 529

Query: 351 EAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEM-------------KLY 397
            A  L+  ++S G    ++TY+ L+ G  +AGQ   A ++F+ M             K Y
Sbjct: 530 YANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQY 589

Query: 398 N---VEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRL 454
           +     P++ TY  L+DG CK++ V+EA KL   + M   E    +++ LIDGLCK G+L
Sbjct: 590 DDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKL 649

Query: 455 DNAWELFHKLPQKGL-----------------------------------VPTVVTYSIM 479
           D A E+  ++ + G                                     P VV Y+ M
Sbjct: 650 DEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEM 709

Query: 480 IHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPER 539
           I GLC+ GK ++A   +  ME+ GC PNVVT+  ++ GF    K    +ELL +M    +
Sbjct: 710 IDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMG--SK 767

Query: 540 NLVPDDTTFSIVVDLLAKD 558
            + P+  T+ +++D   K+
Sbjct: 768 GVAPNYVTYRVLIDHCCKN 786



 Score =  195 bits (496), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 131/467 (28%), Positives = 233/467 (49%), Gaps = 28/467 (5%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CK+G+I   +AR +F  M  +  +P + ++  L  A  K +        +  ++S G LP
Sbjct: 488 CKAGLIE--QARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLP 545

Query: 109 DFLTLNILINCF---GNKERG------LCVENRIKEATWLFKNMIAFGVRPDVITYGTLI 159
           + +T + LI+     G  E+       +C    + +    FK       RP+V+TYG L+
Sbjct: 546 NIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALL 605

Query: 160 NGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEM 219
           +GFC++  +  A +L   M     E       N   Y  +ID LCK G +D+A+E+  EM
Sbjct: 606 DGFCKSHRVEEARKLLDAMSMEGCE------PNQIVYDALIDGLCKVGKLDEAQEVKTEM 659

Query: 220 KGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKI 279
              G    +   ++LI  +      +  + +  +ML+    PN++ +  MID LCK GK 
Sbjct: 660 SEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKT 719

Query: 280 NEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNIL 339
           +EA  L+++M ++G  P+  TY +++DG+ ++G+I+T  E+   M SKG     V+Y +L
Sbjct: 720 DEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVL 779

Query: 340 INGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNV 399
           I+  CK   ++ A +L  ++           Y  ++ G  +         L DE+   + 
Sbjct: 780 IDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFIESLG--LLDEIGQDDT 837

Query: 400 EPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGI----EIFNCLIDGLCKAGRLD 455
            P LS Y +LID L K   ++ A++L    E+  F   +      +N LI+ LC A +++
Sbjct: 838 APFLSVYRLLIDNLIKAQRLEMALRLLE--EVATFSATLVDYSSTYNSLIESLCLANKVE 895

Query: 456 NAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKA---NDFLLYM 499
            A++LF ++ +KG++P + ++  +I GL R  K+ +A    DF+ +M
Sbjct: 896 TAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLLDFISHM 942



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 132/499 (26%), Positives = 207/499 (41%), Gaps = 70/499 (14%)

Query: 146 FGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCK 205
           F  RP   TY  LI  F +   L  A  +H++M   +       + + F+      SLCK
Sbjct: 188 FRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANL------RMDGFTLRCFAYSLCK 241

Query: 206 EGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLT 265
            G   K +E    ++     P  V  T LI G C A  +EE       M      PN++T
Sbjct: 242 VG---KWREALTLVETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVT 298

Query: 266 FNVMIDCLCKGGK-INEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSM 324
           ++ ++ C C   K +     +L +M+  G  P    +NSL+  YC  G    A ++   M
Sbjct: 299 YSTLL-CGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKM 357

Query: 325 HSKGCKHTVVSYNILINGYCK-------------------------ILN----------- 348
              G     V YNILI   C                          +LN           
Sbjct: 358 VKCGHMPGYVVYNILIGSICGDKDSLNFDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCL 417

Query: 349 -----VEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDL 403
                 E+A S+ R++I  G      TY+ +L+ L  A +   A  LF+EMK   +  D+
Sbjct: 418 CSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADV 477

Query: 404 STYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHK 463
            TY I++D  CK   +++A K F+ +        +  +  LI    KA ++  A ELF  
Sbjct: 478 YTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFET 537

Query: 464 LPQKGLVPTVVTYSIMIHGLCRKGKLEKA-------------NDFLLYMEK---NGCAPN 507
           +  +G +P +VTYS +I G C+ G++EKA              D  +Y ++   N   PN
Sbjct: 538 MLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPN 597

Query: 508 VVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAV 567
           VVT+  L+ GF ++++  +  +LL  M+       P+   +  ++D L K  K  E   V
Sbjct: 598 VVTYGALLDGFCKSHRVEEARKLLDAMS--MEGCEPNQIVYDALIDGLCKVGKLDEAQEV 655

Query: 568 SKSSYRACLYVTIFQPSSL 586
                      T++  SSL
Sbjct: 656 KTEMSEHGFPATLYTYSSL 674



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 85/374 (22%), Positives = 139/374 (37%), Gaps = 81/374 (21%)

Query: 256 DLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRID 315
           D   RP+  T+N +I    K  +++ A+ +   M    L  D FT        C VG+  
Sbjct: 187 DFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKW- 245

Query: 316 TAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLL 375
             RE    + ++      V Y  LI+G C+    EEAM    ++ +      V+TY+TLL
Sbjct: 246 --REALTLVETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLL 303

Query: 376 SGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFE 435
            G     Q G  +++ + M +    P    +N L+   C +     A KL   +      
Sbjct: 304 CGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHM 363

Query: 436 FGIEIFNCLIDG-----------------------------------------LCKAGRL 454
            G  ++N LI                                           LC AG+ 
Sbjct: 364 PGYVVYNILIGSICGDKDSLNFDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKY 423

Query: 455 DNAWELFHKLPQKGLVP-----------------------------------TVVTYSIM 479
           + A+ +  ++  +G +P                                    V TY+IM
Sbjct: 424 EKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIM 483

Query: 480 IHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPER 539
           +   C+ G +E+A  +   M + GC PNVVT+  L+H +L+  K S   EL   M     
Sbjct: 484 VDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETML--SE 541

Query: 540 NLVPDDTTFSIVVD 553
             +P+  T+S ++D
Sbjct: 542 GCLPNIVTYSALID 555



 Score = 82.4 bits (202), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 66/239 (27%), Positives = 107/239 (44%), Gaps = 9/239 (3%)

Query: 301 YNSLMDGYCLVGRIDTAR--EIFLSMHSKGCKHTVVSY-NILINGYCKILNVEEAMSLYR 357
           YN+L+D   L+ R D  +  E FL       K     + N+L+  +C+  +   A+    
Sbjct: 127 YNALVD---LIVRDDDEKVPEEFLQQIRDDDKEVFGQFLNVLVRKHCRNGSFSIALEELG 183

Query: 358 QIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNN 417
           ++     R +  TYN L+    +A +   A  +  EM L N+  D  T       LCK  
Sbjct: 184 RLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVG 243

Query: 418 CVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYS 477
             +EA+ L   +E   F      +  LI GLC+A   + A +  +++     +P VVTYS
Sbjct: 244 KWREALTL---VETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYS 300

Query: 478 IMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAE 536
            ++ G   K +L +    L  M   GC P+   FN+L+H +  +   S   +LL KM +
Sbjct: 301 TLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVK 359



 Score = 82.0 bits (201), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 75/303 (24%), Positives = 127/303 (41%), Gaps = 15/303 (4%)

Query: 266 FNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMH 325
            NV++   C+ G  + A   L  +      P R TYN L+  +    R+D+A  I   M 
Sbjct: 162 LNVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMS 221

Query: 326 SKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAG 385
               +    +        CK+    EA++L      N V  TV  Y  L+SGL +A    
Sbjct: 222 LANLRMDGFTLRCFAYSLCKVGKWREALTLVE--TENFVPDTVF-YTKLISGLCEASLFE 278

Query: 386 YAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLI 445
            A    + M+  +  P++ TY+ L+ G      +    ++ +M+ M       +IFN L+
Sbjct: 279 EAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLV 338

Query: 446 DGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKAN-DFLLYMEK--- 501
              C +G    A++L  K+ + G +P  V Y+I+I  +C  G  +  N D L   EK   
Sbjct: 339 HAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSIC--GDKDSLNFDLLDLAEKAYS 396

Query: 502 ----NGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAK 557
                G   N +  ++         K  K   ++ +M    +  +PD +T+S V++ L  
Sbjct: 397 EMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMI--GQGFIPDTSTYSKVLNYLCN 454

Query: 558 DEK 560
             K
Sbjct: 455 ASK 457


>gi|50878351|gb|AAT85126.1| hypothetical protein [Oryza sativa Japonica Group]
          Length = 920

 Score =  235 bits (599), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 143/515 (27%), Positives = 264/515 (51%), Gaps = 16/515 (3%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
           N  L++  +SG   +  A   +G M      P   +  ++  A  ++      + F  ++
Sbjct: 187 NRLLNKLVQSGDPGM--AAMVYGQMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEM 244

Query: 102 VSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLING 161
             +GL  + +  + +++C+       C     ++A  + +++   G+ P+V+TY  L+ G
Sbjct: 245 EGMGLEVNLVAYHAVMDCY-------CGMGWTEDARRILESLQRKGLSPNVVTYTLLVKG 297

Query: 162 FCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKG 221
           +C+ G +  A R+ K+M     E G I    + +Y ++I+  C+ G +D A  +  EM+ 
Sbjct: 298 YCKDGRMEEAERVVKEM----KETGDIVVDEV-AYGMMINGYCQRGRMDDATRVRNEMRD 352

Query: 222 RGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINE 281
            GI+  + V  T+I+G C  G  EEV  +  EM D+G RP+  ++N +ID  C+ G + +
Sbjct: 353 AGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRK 412

Query: 282 ANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILIN 341
           A  +  +M++ GL     TYN+L+ G+C +  ID A  ++  M  +G     +S + L++
Sbjct: 413 AFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLD 472

Query: 342 GYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEP 401
           G  K    E+A++L+++ ++ G+ + VIT+NT+++GL + G+   A++L D MK     P
Sbjct: 473 GLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPP 532

Query: 402 DLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELF 461
           D  TY  L DG CK   +  A  L + +E   F   +E+FN  I G   A +     ++ 
Sbjct: 533 DSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIH 592

Query: 462 HKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQN 521
            ++  +GL P +VTY  +I G C++G L +A +    M  NG  PNV   + LM  F + 
Sbjct: 593 SEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKE 652

Query: 522 NKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLA 556
            K  +   +L K+   +  ++P  +  +I +D ++
Sbjct: 653 GKVDEANLVLQKLVNID--MIPGCSISTIEIDKIS 685



 Score =  225 bits (573), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 144/521 (27%), Positives = 246/521 (47%), Gaps = 74/521 (14%)

Query: 77  SFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEA 136
           ++ ++     +    D       ++   G+  +    N +IN       GLC   R++E 
Sbjct: 326 AYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMIN-------GLCKLGRMEEV 378

Query: 137 TWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSY 196
             + + M   G+RPD  +Y TLI+G+CR G++  A  + + MV     NGL + T   +Y
Sbjct: 379 QKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMV----RNGLAATT--LTY 432

Query: 197 SIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLD 256
           + ++   C    +D A  L+  M  RG+ P  + C+TL+ G   AG  E+   L+ E L 
Sbjct: 433 NTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLA 492

Query: 257 LGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDT 316
            G   N++TFN +I+ LCK G++ EA  LL+ M +    PD  TY +L DGYC +G++ T
Sbjct: 493 RGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGT 552

Query: 317 A-----------------------------------REIFLSMHSKGCKHTVVSYNILIN 341
           A                                    +I   M ++G    +V+Y  LI 
Sbjct: 553 ATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIA 612

Query: 342 GYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEP 401
           G+CK  N+ EA +LY ++++NG+   V   + L+S  ++ G+   A  +  ++   ++ P
Sbjct: 613 GWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQKLVNIDMIP 672

Query: 402 DLST--------------------------YNILIDGLCKNNCVQEAVKLFHMLEMNKFE 435
             S                           +N++I GLCK+  + +A  LF  L   +F 
Sbjct: 673 GCSISTIEIDKISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIADAKSLFESLRNKRFL 732

Query: 436 FGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDF 495
                ++ LI G   +G +D A+ L   +   GL P ++TY+ +I+GLC+ GKL +A + 
Sbjct: 733 PDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNL 792

Query: 496 LLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAE 536
              ++  G +PN +T+NTL+  + +  KT++  +L  KM E
Sbjct: 793 FNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVE 833



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 133/485 (27%), Positives = 233/485 (48%), Gaps = 44/485 (9%)

Query: 77  SFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEA 136
           ++N L          D  +  +  ++  G+ P+ ++ + L++       GL    + ++A
Sbjct: 431 TYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLD-------GLFKAGKTEQA 483

Query: 137 TWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSY 196
             L+K  +A G+  +VIT+ T+ING C+ G ++ A  L  +M        L    +  +Y
Sbjct: 484 LNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKE------LRCPPDSLTY 537

Query: 197 SIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLD 256
             + D  CK G +  A  L  +M+  G  P+V +  + I G   A  W +VN +  EM  
Sbjct: 538 RTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSA 597

Query: 257 LGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDT 316
            G  PNL+T+  +I   CK G ++EA  L   M+  G+NP+ F  ++LM  +   G++D 
Sbjct: 598 RGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDE 657

Query: 317 AREIFLSMHSKGCKHTVVSYNILINGYCKILNVE-EAMSLYRQIISNGVRQTV-ITYNTL 374
           A  +   +            NI +   C I  +E + +S     I++G   +  + +N +
Sbjct: 658 ANLVLQKL-----------VNIDMIPGCSISTIEIDKISHVVDTIADGNPHSANVMWNVI 706

Query: 375 LSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKF 434
           + GL ++G+   A+ LF+ ++     PD  TY+ LI G   +  + EA  L  ++     
Sbjct: 707 IFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGL 766

Query: 435 EFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGK------ 488
              I  +N LI GLCK+G+L  A  LF+KL  KG+ P  +TY+ +I   C++GK      
Sbjct: 767 TPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFK 826

Query: 489 ----------LEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPE 538
                     +E+A   L  M +N   PN +T+ TL+HG++++    ++ +L  +M    
Sbjct: 827 LKQKMVEEGYMEEAIKLLDQMIENNVDPNYITYCTLIHGYIKSGNMEEISKLYDEMH--I 884

Query: 539 RNLVP 543
           R L+P
Sbjct: 885 RGLLP 889



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 107/403 (26%), Positives = 201/403 (49%), Gaps = 9/403 (2%)

Query: 152 VITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDK 211
            +++  L+      G LS AL +   M        +  + ++ S + +++ L + G    
Sbjct: 148 AVSFDLLLRAHADAGQLSSALNVFDGM------GKVGCRPSLRSCNRLLNKLVQSGDPGM 201

Query: 212 AKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMID 271
           A  ++ +M+  G+ P       +   +C  G   +      EM  +G   NL+ ++ ++D
Sbjct: 202 AAMVYGQMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMD 261

Query: 272 CLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKG-CK 330
           C C  G   +A  +LE + ++GL+P+  TY  L+ GYC  GR++ A  +   M   G   
Sbjct: 262 CYCGMGWTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIV 321

Query: 331 HTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKL 390
              V+Y ++INGYC+   +++A  +  ++   G+   +  YNT+++GL + G+    QK+
Sbjct: 322 VDEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKV 381

Query: 391 FDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCK 450
             EM+   + PD  +YN LIDG C+   +++A ++  M+  N        +N L+ G C 
Sbjct: 382 LQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCS 441

Query: 451 AGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVT 510
              +D+A  L+  + ++G+ P  ++ S ++ GL + GK E+A +        G A NV+T
Sbjct: 442 LHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVIT 501

Query: 511 FNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
           FNT+++G  +  + ++  ELL +M E      PD  T+  + D
Sbjct: 502 FNTVINGLCKIGRMAEAEELLDRMKELR--CPPDSLTYRTLFD 542



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 123/459 (26%), Positives = 215/459 (46%), Gaps = 55/459 (11%)

Query: 56  LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNI 115
           +++A   +  M     +P   S + L   + K    +  ++ +++ ++ GL  + +T N 
Sbjct: 445 IDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNT 504

Query: 116 LINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLH 175
           +IN       GLC   R+ EA  L   M      PD +TY TL +G+C+ G L  A  L 
Sbjct: 505 VIN-------GLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLM 557

Query: 176 KKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLI 235
            KM       G      +F+  I    + K+    K  ++  EM  RG++P +V    LI
Sbjct: 558 NKM----EHLGFAPSVEMFNSFITGHFIAKQW--HKVNDIHSEMSARGLSPNLVTYGALI 611

Query: 236 HGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLN 295
            G+C  GN  E   L+ EM++ G  PN+   + ++ C  K GK++EAN +L+ ++   + 
Sbjct: 612 AGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQKLVNIDMI 671

Query: 296 P---------DRFT-----------------YNSLMDGYCLVGRIDTAREIFLSMHSKGC 329
           P         D+ +                 +N ++ G C  GRI  A+ +F S+ +K  
Sbjct: 672 PGCSISTIEIDKISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIADAKSLFESLRNKRF 731

Query: 330 KHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQK 389
                +Y+ LI+G     +++EA SL   ++S G+   +ITYN+L+ GL ++G+   A  
Sbjct: 732 LPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVN 791

Query: 390 LFDEMKLYNVEPDLSTYNILIDGLCKNN----------------CVQEAVKLFHMLEMNK 433
           LF++++   + P+  TYN LID  CK                   ++EA+KL   +  N 
Sbjct: 792 LFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGYMEEAIKLLDQMIENN 851

Query: 434 FEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPT 472
            +     +  LI G  K+G ++   +L+ ++  +GL+PT
Sbjct: 852 VDPNYITYCTLIHGYIKSGNMEEISKLYDEMHIRGLLPT 890



 Score =  164 bits (416), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 100/364 (27%), Positives = 181/364 (49%), Gaps = 3/364 (0%)

Query: 195 SYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEM 254
           S+ +++ +    G +  A  +F  M   G  P++  C  L++    +G+      ++ +M
Sbjct: 150 SFDLLLRAHADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGDPGMAAMVYGQM 209

Query: 255 LDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRI 314
              G  P+  T  +M    C+ G++ +A   +E M   GL  +   Y+++MD YC +G  
Sbjct: 210 RIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWT 269

Query: 315 DTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNG-VRQTVITYNT 373
           + AR I  S+  KG    VV+Y +L+ GYCK   +EEA  + +++   G +    + Y  
Sbjct: 270 EDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGM 329

Query: 374 LLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNK 433
           +++G  Q G+   A ++ +EM+   +  +L  YN +I+GLCK   ++E  K+   +E   
Sbjct: 330 MINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVG 389

Query: 434 FEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKAN 493
                  +N LIDG C+ G +  A+E+   + + GL  T +TY+ ++ G C    ++ A 
Sbjct: 390 MRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDAL 449

Query: 494 DFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
                M K G APN ++ +TL+ G  +  KT + + L  +     R L  +  TF+ V++
Sbjct: 450 RLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETL--ARGLAKNVITFNTVIN 507

Query: 554 LLAK 557
            L K
Sbjct: 508 GLCK 511



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 105/373 (28%), Positives = 169/373 (45%), Gaps = 48/373 (12%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CK G   L  A +    M H+  +P +  FN         + +  V   + ++ + GL P
Sbjct: 545 CKLG--QLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSP 602

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           + +T   LI        G C E  + EA  L+  M+  G+ P+V     L++ F + G +
Sbjct: 603 NLVTYGALIA-------GWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKV 655

Query: 169 SVALRLHKKMVSGDYENG----------------LISKTNIFS----YSIIIDSLCKEGL 208
             A  + +K+V+ D   G                 I+  N  S    +++II  LCK G 
Sbjct: 656 DEANLVLQKLVNIDMIPGCSISTIEIDKISHVVDTIADGNPHSANVMWNVIIFGLCKSGR 715

Query: 209 VDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNV 268
           +  AK LF  ++ +   P     ++LIHG   +G+ +E   L   ML  G  PN++T+N 
Sbjct: 716 IADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNS 775

Query: 269 MIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKG 328
           +I  LCK GK++ A  L   +  +G++P+  TYN+L+D YC  G+   A ++   M  +G
Sbjct: 776 LIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEG 835

Query: 329 CKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQ 388
                               +EEA+ L  Q+I N V    ITY TL+ G  ++G      
Sbjct: 836 -------------------YMEEAIKLLDQMIENNVDPNYITYCTLIHGYIKSGNMEEIS 876

Query: 389 KLFDEMKLYNVEP 401
           KL+DEM +  + P
Sbjct: 877 KLYDEMHIRGLLP 889



 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 50/206 (24%), Positives = 109/206 (52%), Gaps = 1/206 (0%)

Query: 332 TVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLF 391
           + VS+++L+  +     +  A++++  +   G R ++ + N LL+ L Q+G  G A  ++
Sbjct: 147 SAVSFDLLLRAHADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGDPGMAAMVY 206

Query: 392 DEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKA 451
            +M++  V PD  T  I+    C++  V +AV+    +E    E  +  ++ ++D  C  
Sbjct: 207 GQMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGM 266

Query: 452 GRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNG-CAPNVVT 510
           G  ++A  +   L +KGL P VVTY++++ G C+ G++E+A   +  M++ G    + V 
Sbjct: 267 GWTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVA 326

Query: 511 FNTLMHGFLQNNKTSKVVELLHKMAE 536
           +  +++G+ Q  +      + ++M +
Sbjct: 327 YGMMINGYCQRGRMDDATRVRNEMRD 352



 Score = 82.0 bits (201), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 80/289 (27%), Positives = 123/289 (42%), Gaps = 43/289 (14%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CK G  NL+EA   +  M +   +P +   + L     K    D      +KLV+I ++P
Sbjct: 615 CKEG--NLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQKLVNIDMIP 672

Query: 109 DFLTLNILINCF---------GNKER----------GLCVENRIKEATWLFKNMIAFGVR 149
                 I I+           GN             GLC   RI +A  LF+++      
Sbjct: 673 GCSISTIEIDKISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIADAKSLFESLRNKRFL 732

Query: 150 PDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLV 209
           PD  TY +LI+G   +G++  A  L   M+S     GL    NI +Y+ +I  LCK G +
Sbjct: 733 PDNFTYSSLIHGCAASGSIDEAFSLRDVMLSA----GLTP--NIITYNSLIYGLCKSGKL 786

Query: 210 DKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGN----------------WEEVNGLFIE 253
            +A  LF +++ +GI+P  +   TLI  +C  G                  EE   L  +
Sbjct: 787 SRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGYMEEAIKLLDQ 846

Query: 254 MLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYN 302
           M++    PN +T+  +I    K G + E + L + M  RGL P  +  N
Sbjct: 847 MIENNVDPNYITYCTLIHGYIKSGNMEEISKLYDEMHIRGLLPTNWIGN 895


>gi|222636287|gb|EEE66419.1| hypothetical protein OsJ_22769 [Oryza sativa Japonica Group]
          Length = 1393

 Score =  235 bits (599), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 155/515 (30%), Positives = 247/515 (47%), Gaps = 49/515 (9%)

Query: 57  NEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNIL 116
           ++AR  F  M H    P +++FN +  A+ K            K++  G+  +  T NI 
Sbjct: 168 HDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIW 227

Query: 117 INCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHK 176
           I       RGLC   R+ EA  L   M A+ V PDV+TY TLI G C+      A+   +
Sbjct: 228 I-------RGLCEAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLR 279

Query: 177 KMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIH 236
           +M++     G +   + F+Y+ IID  CK  +V +A EL  +   +G  P  V   +LI+
Sbjct: 280 RMMN----QGCLP--DDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLIN 333

Query: 237 GFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNP 296
           G C  G+ E    LF E    G +P+++ +N ++  LC  G I  A  ++  M + G +P
Sbjct: 334 GLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHP 393

Query: 297 DRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLY 356
           D  TYN +++G C +G I  A  +      KG    V ++N LI+GYCK L ++ A+ L 
Sbjct: 394 DIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLV 453

Query: 357 RQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKN 416
            ++   G+    ITYN++L+GL +AG+     + F EM L    P+  TYNILI+  C++
Sbjct: 454 ERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRS 513

Query: 417 NCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTV--- 473
           N ++EA K+   +           FN LI G C+ G L+ A+ LF KL +KG   T    
Sbjct: 514 NKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTF 573

Query: 474 --------------------------------VTYSIMIHGLCRKGKLEKANDFLLYMEK 501
                                            TY ++I G C+   +++A   L+ M K
Sbjct: 574 NTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIK 633

Query: 502 NGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAE 536
            G  P++ TF  +++    N++  + V ++H M +
Sbjct: 634 KGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVK 668



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 143/497 (28%), Positives = 251/497 (50%), Gaps = 20/497 (4%)

Query: 56  LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNI 115
           L +A   F  M      P   ++N +  A+    ++D     Y ++++ G+ PD  T  I
Sbjct: 66  LRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRMLAAGVSPDLHTHTI 125

Query: 116 LINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLH 175
            +       R  C+  R   A  L + +   G     + Y T++ G    G+   A +L 
Sbjct: 126 RL-------RSFCLTARPHIALRLLRALPHRGA----VAYCTVVCGLYAHGHTHDARQLF 174

Query: 176 KKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLI 235
            +M+            N+ +++ ++ +LCK G V +A  L  ++  RG++  +      I
Sbjct: 175 DQMLHTHV------FPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWI 228

Query: 236 HGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLN 295
            G C AG   E   L ++ +     P+++T+N +I  LCK     EA   L  M+ +G  
Sbjct: 229 RGLCEAGRLPEAVRL-VDGMRAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCL 287

Query: 296 PDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSL 355
           PD FTYN+++DGYC +  +  A E+      KG     V+Y  LING C   +VE A+ L
Sbjct: 288 PDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALEL 347

Query: 356 YRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCK 415
           + +  + G++  ++ YN+L+ GL   G   +A ++ +EM      PD+ TYNI+I+GLCK
Sbjct: 348 FNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCK 407

Query: 416 NNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVT 475
              + +A  + +   M  +   +  FN LIDG CK  +LD+A +L  ++ + G+ P  +T
Sbjct: 408 MGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTIT 467

Query: 476 YSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMA 535
           Y+ +++GLC+ GK+ + N+    M   GC PN +T+N L+  F ++NK  +  +++ KM+
Sbjct: 468 YNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMS 527

Query: 536 EPERNLVPDDTTFSIVV 552
             +  L PD  +F+ ++
Sbjct: 528 --QEGLHPDAVSFNTLI 542



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 108/397 (27%), Positives = 179/397 (45%), Gaps = 39/397 (9%)

Query: 195 SYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVV--VCTTLIHGFCCAGNWEEVNGLFI 252
           +Y  +I  L   G VD         + R ++PA +  +    I  +  AG   +    F 
Sbjct: 16  AYCALIRPLASAGRVDAVDAAVASARSR-LSPATIHPLYVASIRAYARAGRLRDAVDAFE 74

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
            M      P    +N ++D L      ++A+ +   M+  G++PD  T+   +  +CL  
Sbjct: 75  RMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRMLAAGVSPDLHTHTIRLRSFCLTA 134

Query: 313 R-------------------------------IDTAREIFLSMHSKGCKHTVVSYNILIN 341
           R                                  AR++F  M        + ++N +++
Sbjct: 135 RPHIALRLLRALPHRGAVAYCTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLH 194

Query: 342 GYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEP 401
             CK  +V EA  L  ++I  G+   + TYN  + GL +AG+   A +L D M+ Y V P
Sbjct: 195 ALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAV-P 253

Query: 402 DLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEI-FNCLIDGLCKAGRLDNAWEL 460
           D+ TYN LI GLCK +  QEA+     + MN+     +  +N +IDG CK   +  A EL
Sbjct: 254 DVVTYNTLIRGLCKKSMPQEAMHYLRRM-MNQGCLPDDFTYNTIIDGYCKISMVQEATEL 312

Query: 461 FHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQ 520
                 KG VP  VTY  +I+GLC +G +E+A +     +  G  P++V +N+L+ G   
Sbjct: 313 LKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCL 372

Query: 521 NNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAK 557
                  ++++++MA  E    PD  T++IV++ L K
Sbjct: 373 QGLILHALQVMNEMA--EEGCHPDIQTYNIVINGLCK 407


>gi|297793693|ref|XP_002864731.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297310566|gb|EFH40990.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 732

 Score =  235 bits (599), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 145/492 (29%), Positives = 244/492 (49%), Gaps = 47/492 (9%)

Query: 69  MQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINC-----FGNK 123
           M+ SP   +   +   + + R +D+V   Y+ ++S GL+PD    ++L  C     F +K
Sbjct: 192 MRCSPDSKACLAILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYSVLFQCCFKQGFPSK 251

Query: 124 E-----------------------RGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLIN 160
           +                       R LC EN+++EA  +F+ M   GV P++ TY  +I+
Sbjct: 252 KEKLLDEMTSLGVKPNVYIYTIYIRDLCRENKMEEAEKMFELMKIHGVVPNLYTYSAMID 311

Query: 161 GFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMK 220
           G+C+TGNL  A  L+K+++  +         N+  +  ++D  CK   +  A+ LF+ M 
Sbjct: 312 GYCKTGNLRQAYGLYKEILVAEL------LPNVVVFGTLVDGFCKARELVAARSLFVHMV 365

Query: 221 GRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKIN 280
             G++P + V   LIHG C +GN  E  GL  EM  L   P++ T+ ++I+ LC   ++ 
Sbjct: 366 KFGVDPNLYVYNCLIHGQCKSGNMLEAMGLLSEMESLNLSPDVFTYTILINGLCTEERLA 425

Query: 281 EANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILI 340
           EAN L + M    + P   TYNSL+ G+C    I+ A ++   M S G +  +++++ LI
Sbjct: 426 EANRLFQRMKNERIFPSSVTYNSLIHGFCKEYNIEKALDLCSEMTSSGVEPNIITFSTLI 485

Query: 341 NGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVE 400
           +GYCK+ N++ AM LY ++   G+   V+TY TL+   F+      A +L+ +M    + 
Sbjct: 486 DGYCKVRNIKAAMGLYFEMTIKGIVPDVVTYTTLIDAHFKEANMKEALRLYSDMLEAGIH 545

Query: 401 PDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEI----------FNCLIDGLCK 450
           P+  T+  L+DG  K   + +A+  +  LE N+   G  I          F CLI+GLC+
Sbjct: 546 PNDHTFACLVDGFWKEGRLSDAIDFY--LENNQAATGKSIVQRSCWKYVGFTCLIEGLCQ 603

Query: 451 AGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVT 510
            G +  A   F  +   G+ P + +Y  M+    R+ ++         M K G  PN++ 
Sbjct: 604 NGYILRASRFFSDMKSGGVTPDIWSYVSMLKAHLREKRITDTMMLHCDMIKTGILPNLMV 663

Query: 511 FNTLMHGFLQNN 522
            N L+  F Q N
Sbjct: 664 -NQLLAMFYQEN 674



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 122/397 (30%), Positives = 192/397 (48%), Gaps = 9/397 (2%)

Query: 134 KEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNI 193
           ++A W+ + M      PD      ++NG  R          ++ M+S     GL+   +I
Sbjct: 183 EDALWVSREM---RCSPDSKACLAILNGLVRRRRFDSVWVDYQLMIS----RGLVPDVHI 235

Query: 194 FSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIE 253
             YS++     K+G   K ++L  EM   G+ P V + T  I   C     EE   +F  
Sbjct: 236 --YSVLFQCCFKQGFPSKKEKLLDEMTSLGVKPNVYIYTIYIRDLCRENKMEEAEKMFEL 293

Query: 254 MLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGR 313
           M   G  PNL T++ MID  CK G + +A GL + ++   L P+   + +L+DG+C    
Sbjct: 294 MKIHGVVPNLYTYSAMIDGYCKTGNLRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARE 353

Query: 314 IDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNT 373
           +  AR +F+ M   G    +  YN LI+G CK  N+ EAM L  ++ S  +   V TY  
Sbjct: 354 LVAARSLFVHMVKFGVDPNLYVYNCLIHGQCKSGNMLEAMGLLSEMESLNLSPDVFTYTI 413

Query: 374 LLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNK 433
           L++GL    +   A +LF  MK   + P   TYN LI G CK   +++A+ L   +  + 
Sbjct: 414 LINGLCTEERLAEANRLFQRMKNERIFPSSVTYNSLIHGFCKEYNIEKALDLCSEMTSSG 473

Query: 434 FEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKAN 493
            E  I  F+ LIDG CK   +  A  L+ ++  KG+VP VVTY+ +I    ++  +++A 
Sbjct: 474 VEPNIITFSTLIDGYCKVRNIKAAMGLYFEMTIKGIVPDVVTYTTLIDAHFKEANMKEAL 533

Query: 494 DFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVEL 530
                M + G  PN  TF  L+ GF +  + S  ++ 
Sbjct: 534 RLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSDAIDF 570



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 123/438 (28%), Positives = 214/438 (48%), Gaps = 24/438 (5%)

Query: 100 KLVSIGLLPDFLTLNILINCFGNKERGLCVEN-----RIKEATWL-FKNMIAFGVRPDVI 153
           + + +GL  D L ++  + C  + +  L + N     R  ++ W+ ++ MI+ G+ PDV 
Sbjct: 175 EFLEMGLFEDALWVSREMRCSPDSKACLAILNGLVRRRRFDSVWVDYQLMISRGLVPDVH 234

Query: 154 TYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAK 213
            Y  L     + G  S   +L  +M S      L  K N++ Y+I I  LC+E  +++A+
Sbjct: 235 IYSVLFQCCFKQGFPSKKEKLLDEMTS------LGVKPNVYIYTIYIRDLCRENKMEEAE 288

Query: 214 ELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCL 273
           ++F  MK  G+ P +   + +I G+C  GN  +  GL+ E+L     PN++ F  ++D  
Sbjct: 289 KMFELMKIHGVVPNLYTYSAMIDGYCKTGNLRQAYGLYKEILVAELLPNVVVFGTLVDGF 348

Query: 274 CKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTV 333
           CK  ++  A  L   M++ G++P+ + YN L+ G C  G +  A  +   M S      V
Sbjct: 349 CKARELVAARSLFVHMVKFGVDPNLYVYNCLIHGQCKSGNMLEAMGLLSEMESLNLSPDV 408

Query: 334 VSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDE 393
            +Y ILING C    + EA  L++++ +  +  + +TYN+L+ G  +      A  L  E
Sbjct: 409 FTYTILINGLCTEERLAEANRLFQRMKNERIFPSSVTYNSLIHGFCKEYNIEKALDLCSE 468

Query: 394 MKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGR 453
           M    VEP++ T++ LIDG CK   ++ A+ L+  + +      +  +  LID   K   
Sbjct: 469 MTSSGVEPNIITFSTLIDGYCKVRNIKAAMGLYFEMTIKGIVPDVVTYTTLIDAHFKEAN 528

Query: 454 LDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAP------- 506
           +  A  L+  + + G+ P   T++ ++ G  ++G+L  A DF  Y+E N  A        
Sbjct: 529 MKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSDAIDF--YLENNQAATGKSIVQR 586

Query: 507 ---NVVTFNTLMHGFLQN 521
                V F  L+ G  QN
Sbjct: 587 SCWKYVGFTCLIEGLCQN 604



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 107/364 (29%), Positives = 180/364 (49%), Gaps = 6/364 (1%)

Query: 199 IIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCC--AGNWEEVNGLFIEMLD 256
           I++ L +    D     +  M  RG+ P V + + L    CC   G   +   L  EM  
Sbjct: 204 ILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYSVLFQ--CCFKQGFPSKKEKLLDEMTS 261

Query: 257 LGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDT 316
           LG +PN+  + + I  LC+  K+ EA  + ELM   G+ P+ +TY++++DGYC  G +  
Sbjct: 262 LGVKPNVYIYTIYIRDLCRENKMEEAEKMFELMKIHGVVPNLYTYSAMIDGYCKTGNLRQ 321

Query: 317 AREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLS 376
           A  ++  +        VV +  L++G+CK   +  A SL+  ++  GV   +  YN L+ 
Sbjct: 322 AYGLYKEILVAELLPNVVVFGTLVDGFCKARELVAARSLFVHMVKFGVDPNLYVYNCLIH 381

Query: 377 GLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEF 436
           G  ++G    A  L  EM+  N+ PD+ TY ILI+GLC    + EA +LF  ++  +   
Sbjct: 382 GQCKSGNMLEAMGLLSEMESLNLSPDVFTYTILINGLCTEERLAEANRLFQRMKNERIFP 441

Query: 437 GIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFL 496
               +N LI G CK   ++ A +L  ++   G+ P ++T+S +I G C+   ++ A    
Sbjct: 442 SSVTYNSLIHGFCKEYNIEKALDLCSEMTSSGVEPNIITFSTLIDGYCKVRNIKAAMGLY 501

Query: 497 LYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLA 556
             M   G  P+VVT+ TL+    +     + + L   M E    + P+D TF+ +VD   
Sbjct: 502 FEMTIKGIVPDVVTYTTLIDAHFKEANMKEALRLYSDMLEA--GIHPNDHTFACLVDGFW 559

Query: 557 KDEK 560
           K+ +
Sbjct: 560 KEGR 563



 Score =  172 bits (435), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 105/374 (28%), Positives = 191/374 (51%), Gaps = 5/374 (1%)

Query: 190 KTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNG 249
           K +I  +S++I    + GL + A  +  EM+    +P    C  +++G      ++ V  
Sbjct: 163 KFSIGVFSLLIMEFLEMGLFEDALWVSREMR---CSPDSKACLAILNGLVRRRRFDSVWV 219

Query: 250 LFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYC 309
            +  M+  G  P++  ++V+  C  K G  ++   LL+ M   G+ P+ + Y   +   C
Sbjct: 220 DYQLMISRGLVPDVHIYSVLFQCCFKQGFPSKKEKLLDEMTSLGVKPNVYIYTIYIRDLC 279

Query: 310 LVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVI 369
              +++ A ++F  M   G    + +Y+ +I+GYCK  N+ +A  LY++I+   +   V+
Sbjct: 280 RENKMEEAEKMFELMKIHGVVPNLYTYSAMIDGYCKTGNLRQAYGLYKEILVAELLPNVV 339

Query: 370 TYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHML 429
            + TL+ G  +A +   A+ LF  M  + V+P+L  YN LI G CK+  + EA+ L   +
Sbjct: 340 VFGTLVDGFCKARELVAARSLFVHMVKFGVDPNLYVYNCLIHGQCKSGNMLEAMGLLSEM 399

Query: 430 EMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKL 489
           E       +  +  LI+GLC   RL  A  LF ++  + + P+ VTY+ +IHG C++  +
Sbjct: 400 ESLNLSPDVFTYTILINGLCTEERLAEANRLFQRMKNERIFPSSVTYNSLIHGFCKEYNI 459

Query: 490 EKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFS 549
           EKA D    M  +G  PN++TF+TL+ G+ +       + L  +M    + +VPD  T++
Sbjct: 460 EKALDLCSEMTSSGVEPNIITFSTLIDGYCKVRNIKAAMGLYFEMT--IKGIVPDVVTYT 517

Query: 550 IVVDLLAKDEKYHE 563
            ++D   K+    E
Sbjct: 518 TLIDAHFKEANMKE 531



 Score =  132 bits (331), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 103/347 (29%), Positives = 159/347 (45%), Gaps = 28/347 (8%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CK+    L  AR  F +M      P +  +N L     K+ +    +    ++ S+ L P
Sbjct: 349 CKAR--ELVAARSLFVHMVKFGVDPNLYVYNCLIHGQCKSGNMLEAMGLLSEMESLNLSP 406

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           D  T  ILIN       GLC E R+ EA  LF+ M    + P  +TY +LI+GFC+  N+
Sbjct: 407 DVFTYTILIN-------GLCTEERLAEANRLFQRMKNERIFPSSVTYNSLIHGFCKEYNI 459

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
             AL L  +M S   E       NI ++S +ID  CK   +  A  L+ EM  +GI P V
Sbjct: 460 EKALDLCSEMTSSGVE------PNIITFSTLIDGYCKVRNIKAAMGLYFEMTIKGIVPDV 513

Query: 229 VVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLL-- 286
           V  TTLI       N +E   L+ +ML+ G  PN  TF  ++D   K G++++A      
Sbjct: 514 VTYTTLIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSDAIDFYLE 573

Query: 287 -------ELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNIL 339
                  + ++QR        +  L++G C  G I  A   F  M S G    + SY  +
Sbjct: 574 NNQAATGKSIVQRSC-WKYVGFTCLIEGLCQNGYILRASRFFSDMKSGGVTPDIWSYVSM 632

Query: 340 INGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGY 386
           +  + +   + + M L+  +I  G+   ++  N LL+  +Q  + GY
Sbjct: 633 LKAHLREKRITDTMMLHCDMIKTGILPNLMV-NQLLAMFYQ--ENGY 676


>gi|297848852|ref|XP_002892307.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
            lyrata subsp. lyrata]
 gi|297338149|gb|EFH68566.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 1164

 Score =  235 bits (599), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 138/495 (27%), Positives = 248/495 (50%), Gaps = 15/495 (3%)

Query: 42   NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
            N  +H  C+ G   +NEA +    M     +P + S++ +     +    D V     K+
Sbjct: 673  NIVIHFVCQLG--RINEAHHLLLLMELKGYTPDVISYSTVINGYCRFGELDKVWKLIEKM 730

Query: 102  VSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLING 161
               GL P+  T   +I         LC   ++ EA   F  MI  G+ PD I Y TL++G
Sbjct: 731  KQKGLKPNSYTYGSIIGL-------LCRICKLAEAEEAFSEMIGQGILPDTIVYTTLVDG 783

Query: 162  FCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKG 221
            FC+ G++  A +   +M S D         ++ +Y+ II   C+ G + +A +LF EM  
Sbjct: 784  FCKRGDIRAASKFFYEMHSRDI------TPDVLTYTAIISGFCQIGDMVEAGKLFHEMLC 837

Query: 222  RGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINE 281
            RG+ P ++  T L++G+C AG+ ++   +   M+  G  PN++T+  +ID LCK G ++ 
Sbjct: 838  RGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDS 897

Query: 282  ANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILIN 341
            AN LL  M + GL P+ FTYNS+++G C  G I+ A ++     + G     V+Y  L++
Sbjct: 898  ANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMD 957

Query: 342  GYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEP 401
             YCK   +++A  +  +++  G++ T++T+N L++G    G     +KL + M    + P
Sbjct: 958  AYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAP 1017

Query: 402  DLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELF 461
            + +T+N L+   C  N ++ A  ++  +     E   + +  L+ G C A  +  AW LF
Sbjct: 1018 NATTFNCLVKQYCIRNNLKAATAIYKDMCSRGVEPDGKTYENLVKGHCNARNMKEAWFLF 1077

Query: 462  HKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQN 521
             ++  KG   +V TYS++I G  ++ K  +A +    M ++G A +   F+       + 
Sbjct: 1078 QEMKGKGFSVSVSTYSVLIKGFFKRKKFVEAREIFDQMRRDGLAADKEIFDFFSDTKYKG 1137

Query: 522  NKTSKVVELLHKMAE 536
             +   +V+ + ++ E
Sbjct: 1138 KRPDTIVDPIDEIIE 1152



 Score =  232 bits (592), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 156/536 (29%), Positives = 252/536 (47%), Gaps = 41/536 (7%)

Query: 56   LNEARYFFGYMTHMQPSPPISSFNLLFGAVAK--NRHYDAVISFYRKLVSIGLLPDFLTL 113
            L EAR  F  M +      + S N+    ++K  N+   A+I F R+   +G+  +  + 
Sbjct: 614  LPEARKVFEKMLNYGLVLSVDSCNVYLARLSKDCNKTATAIIVF-REFPEVGVCWNVASY 672

Query: 114  NILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALR 173
            NI+I+        +C   RI EA  L   M   G  PDVI+Y T+ING+CR G L    +
Sbjct: 673  NIVIHF-------VCQLGRINEAHHLLLLMELKGYTPDVISYSTVINGYCRFGELDKVWK 725

Query: 174  LHKKMVS-----GDYENG-----------LISKTNIFS-------------YSIIIDSLC 204
            L +KM         Y  G           L      FS             Y+ ++D  C
Sbjct: 726  LIEKMKQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDTIVYTTLVDGFC 785

Query: 205  KEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLL 264
            K G +  A + F EM  R I P V+  T +I GFC  G+  E   LF EML  G  P+++
Sbjct: 786  KRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRGLEPDII 845

Query: 265  TFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSM 324
            TF  +++  CK G I +A  +   MIQ G +P+  TY +L+DG C  G +D+A E+   M
Sbjct: 846  TFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEM 905

Query: 325  HSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQA 384
               G +  + +YN ++NG CK  N+EEA+ L  +  + G+    +TY TL+    ++G+ 
Sbjct: 906  WKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEM 965

Query: 385  GYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCL 444
              AQ++  EM    ++P + T+N+L++G C +  +++  KL + +           FNCL
Sbjct: 966  DKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNCL 1025

Query: 445  IDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGC 504
            +   C    L  A  ++  +  +G+ P   TY  ++ G C    +++A      M+  G 
Sbjct: 1026 VKQYCIRNNLKAATAIYKDMCSRGVEPDGKTYENLVKGHCNARNMKEAWFLFQEMKGKGF 1085

Query: 505  APNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEK 560
            + +V T++ L+ GF +  K  +  E+  +M      L  D   F    D   K ++
Sbjct: 1086 SVSVSTYSVLIKGFFKRKKFVEAREIFDQMR--RDGLAADKEIFDFFSDTKYKGKR 1139



 Score =  224 bits (572), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 135/468 (28%), Positives = 231/468 (49%), Gaps = 22/468 (4%)

Query: 97   FYRKLVSIGLLPD-------FLTLNILI-----NCFGNKERGLCVENRIKEATWLFKNMI 144
            F++ LV  G+LP+        L   +++     N +  +    C  N+   A  +F+   
Sbjct: 604  FFQVLVEFGMLPEARKVFEKMLNYGLVLSVDSCNVYLARLSKDC--NKTATAIIVFREFP 661

Query: 145  AFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLC 204
              GV  +V +Y  +I+  C+ G ++ A  L   M    Y        ++ SYS +I+  C
Sbjct: 662  EVGVCWNVASYNIVIHFVCQLGRINEAHHLLLLMELKGY------TPDVISYSTVINGYC 715

Query: 205  KEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLL 264
            + G +DK  +L  +MK +G+ P      ++I   C      E    F EM+  G  P+ +
Sbjct: 716  RFGELDKVWKLIEKMKQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDTI 775

Query: 265  TFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSM 324
             +  ++D  CK G I  A+     M  R + PD  TY +++ G+C +G +  A ++F  M
Sbjct: 776  VYTTLVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEM 835

Query: 325  HSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQA 384
              +G +  ++++  L+NGYCK  ++++A  ++  +I  G    V+TY TL+ GL + G  
Sbjct: 836  LCRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDL 895

Query: 385  GYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCL 444
              A +L  EM    ++P++ TYN +++GLCK+  ++EAVKL    E          +  L
Sbjct: 896  DSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTL 955

Query: 445  IDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGC 504
            +D  CK+G +D A E+  ++  KGL PT+VT++++++G C  G LE     L +M   G 
Sbjct: 956  MDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGI 1015

Query: 505  APNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVV 552
            APN  TFN L+  +   N       +   M    R + PD  T+  +V
Sbjct: 1016 APNATTFNCLVKQYCIRNNLKAATAIYKDMC--SRGVEPDGKTYENLV 1061


>gi|449462136|ref|XP_004148797.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Cucumis sativus]
          Length = 660

 Score =  235 bits (599), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 140/480 (29%), Positives = 241/480 (50%), Gaps = 19/480 (3%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
           P +  +N L  A+     +  +   Y  +   GL+P+  T NIL+       + LC  +R
Sbjct: 142 PTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILL-------KALCKNDR 194

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
           +  A  LF  M   G  PD +TY T+++  C+ G +  A  L  +            K +
Sbjct: 195 VDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAGRF-----------KPS 243

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
           +  Y+ +ID +CKEG ++ A +L  EM   G++P VV  + +I+  C +GN E    LF 
Sbjct: 244 VPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFA 303

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
           +M   G   N+ TF  +I      GK+ EA  L +LMIQ G  P+   YN+L+ G C  G
Sbjct: 304 QMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNG 363

Query: 313 RIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYN 372
            ++ A ++   M   GC   V +Y+ILI+G+ K  ++  A   + ++IS+G R  V+TY 
Sbjct: 364 SLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYT 423

Query: 373 TLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMN 432
            ++  L +      A  L ++M L    P+  T+N  I GLC N  V+ A+KL   ++ +
Sbjct: 424 CMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLLERMQGH 483

Query: 433 KFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKA 492
                I  +N L+D L +  + + A+ LF ++  + L P +VTY+ +++G  R G + +A
Sbjct: 484 GCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEA 543

Query: 493 NDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVV 552
                     G AP+ +T+NT++H + +  K     +L+ +++   +   PD  T++ ++
Sbjct: 544 LQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSS-MKEWHPDIITYTSLI 602



 Score =  204 bits (520), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 126/406 (31%), Positives = 205/406 (50%), Gaps = 13/406 (3%)

Query: 158 LINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFL 217
           +ING+ R G+   AL++  ++  G++      K  +  Y+ ++D+L  E        L+ 
Sbjct: 115 IINGYKRVGSAEQALKMFYRI--GEFG----CKPTVRIYNHLLDALLSENKFQMINPLYT 168

Query: 218 EMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGG 277
            MK  G+ P V     L+   C     +  + LF+EM + G  P+ +T+  M+  LCK G
Sbjct: 169 NMKKDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAG 228

Query: 278 KINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYN 337
           KI++A  L          P    YN+L+DG C  GRI+ A ++   M   G    VVSY+
Sbjct: 229 KIDDAREL-----AGRFKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYS 283

Query: 338 ILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLY 397
            +IN  C   NVE A +L+ Q+   G    + T+  L+ G F  G+   A  L+  M   
Sbjct: 284 CIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQD 343

Query: 398 NVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNA 457
             EP++  YN LI GLC N  ++EA+++   ++ +     +  ++ LIDG  K+G L  A
Sbjct: 344 GCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGA 403

Query: 458 WELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHG 517
            E ++++   G  P VVTY+ M+  LC+    ++AN  +  M   GC PN +TFNT + G
Sbjct: 404 SETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKG 463

Query: 518 FLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
              N +    ++LL +M       +P+ TT++ ++D L +  KY E
Sbjct: 464 LCGNGRVEWAMKLLERMQG--HGCLPNITTYNELLDALFRMNKYEE 507



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 117/394 (29%), Positives = 202/394 (51%), Gaps = 13/394 (3%)

Query: 188 ISKTNIF-----SYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAG 242
           I+ +N F     +Y ++I+ L +E  +D  + +  +MK  GIN    +   +I+G+   G
Sbjct: 64  IANSNAFQHTASTYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLFICIINGYKRVG 123

Query: 243 NWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYN 302
           + E+   +F  + + G +P +  +N ++D L    K    N L   M + GL P+ FTYN
Sbjct: 124 SAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYN 183

Query: 303 SLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISN 362
            L+   C   R+D A ++F+ M +KGC    V+Y  +++  CK   +++A  L     + 
Sbjct: 184 ILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDAREL-----AG 238

Query: 363 GVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEA 422
             + +V  YN L+ G+ + G+   A KL  EM    V+P++ +Y+ +I+ LC +  V+ A
Sbjct: 239 RFKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELA 298

Query: 423 VKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHG 482
             LF  + +   +  I  F  LI G    G+L  A +L+  + Q G  P VV Y+ +IHG
Sbjct: 299 FALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHG 358

Query: 483 LCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLV 542
           LC  G LE+A      M+++GC PNV T++ L+ GF ++       E  ++M        
Sbjct: 359 LCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMI--SHGCR 416

Query: 543 PDDTTFSIVVDLLAKDEKYHEC-SAVSKSSYRAC 575
           P+  T++ +VD+L K+  + +  S V K +   C
Sbjct: 417 PNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGC 450



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 103/385 (26%), Positives = 169/385 (43%), Gaps = 54/385 (14%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFN-LLFGAVAKNRHYDAVISFYRKLVSIGLL 107
           C SG  N+  A   F  M        I +F  L+ G   + + Y+A +  ++ ++  G  
Sbjct: 290 CVSG--NVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEA-LDLWKLMIQDGCE 346

Query: 108 PDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGN 167
           P+ +  N LI+       GLC    ++EA  +   M   G  P+V TY  LI+GF ++G+
Sbjct: 347 PNVVAYNTLIH-------GLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGD 399

Query: 168 LSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPA 227
           L  A     +M+S         + N+ +Y+ ++D LCK  + D+A  L  +M   G  P 
Sbjct: 400 LVGASETWNRMISHG------CRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPN 453

Query: 228 VVVCTTLIHGFCCAG-----------------------------------NWEEVNGLFI 252
            +   T I G C  G                                    +EE  GLF 
Sbjct: 454 TMTFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQ 513

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
           E+     +PNL+T+N ++    + G + EA  L    + RG  PD  TYN+++  YC  G
Sbjct: 514 EIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQG 573

Query: 313 RIDTAREIFLSMHSKGCKH-TVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
           ++  A ++   + S    H  +++Y  LI G C  +N+EEAM+   + I+ G+     T+
Sbjct: 574 KVKIAAQLVERVSSMKEWHPDIITYTSLIWGACNWMNIEEAMAFLDKAINQGICPNFATW 633

Query: 372 NTLLSGLFQA-GQAGYAQKLFDEMK 395
           N L+   F + G  G    L D ++
Sbjct: 634 NALVRCFFDSLGHMGPIHILDDILR 658


>gi|297797589|ref|XP_002866679.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297312514|gb|EFH42938.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 915

 Score =  235 bits (599), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 144/448 (32%), Positives = 230/448 (51%), Gaps = 9/448 (2%)

Query: 111 LTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSV 170
           L   ++I C+      L     + E   ++  M+   V P++ TY  ++NG+C+ GN+  
Sbjct: 177 LKYKLIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKVGNVEE 236

Query: 171 ALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVV 230
           A     + VS   E GL    + F+Y+ +I   C+   +D A ++F EM  +G     V 
Sbjct: 237 A----NQYVSMIVEAGL--DPDFFTYTSLIMGYCQRKDLDSAFKVFKEMPLKGCRRNEVA 290

Query: 231 CTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMI 290
            T LIHG C     +E   LF++M D    P + T+ V+I  LC   + +EA  L++ M 
Sbjct: 291 YTHLIHGLCVERRIDEAMDLFVKMKDDDCYPTVRTYTVLIKALCGSERKSEALNLVKEME 350

Query: 291 QRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVE 350
           ++G+ P+  TY  L+D  C   +++ ARE+   M  KG    V++YN LINGYCK   +E
Sbjct: 351 EKGIKPNIHTYTVLIDSLCSQCKLEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIE 410

Query: 351 EAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILI 410
           +A+ +   + S  +R    TYN L+ G +       A  + ++M    V PD+ TYN LI
Sbjct: 411 DALDVVELMESRNLRPNTRTYNELIKG-YCKRNVHKAMGVLNKMLERKVLPDVVTYNSLI 469

Query: 411 DGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLV 470
           DG C++     A +L  ++           +  +ID LCK+ R++ A +LF  L QK ++
Sbjct: 470 DGQCRSGNFDSAYRLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDVI 529

Query: 471 PTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVEL 530
           P VV Y+ +I G C+ GK+ +A+  L  M    C PN +TFN L+HG   + K  +   L
Sbjct: 530 PNVVMYTALIDGYCKAGKVNEAHLMLEKMLSKNCLPNSLTFNALIHGLCTDGKLKEATLL 589

Query: 531 LHKMAEPERNLVPDDTTFSIVVDLLAKD 558
             KM +   +L P  +T +I++  L KD
Sbjct: 590 EEKMVKI--DLQPTVSTDTILIHRLLKD 615



 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 163/550 (29%), Positives = 256/550 (46%), Gaps = 55/550 (10%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
           N+ ++  CK G  N+ EA  +   +      P   ++  L     + +  D+    ++++
Sbjct: 222 NKMVNGYCKVG--NVEEANQYVSMIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFKEM 279

Query: 102 VSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLING 161
              G   + +    LI+       GLCVE RI EA  LF  M      P V TY  LI  
Sbjct: 280 PLKGCRRNEVAYTHLIH-------GLCVERRIDEAMDLFVKMKDDDCYPTVRTYTVLIKA 332

Query: 162 FCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKG 221
            C +   S AL L K+M     E G+  K NI +Y+++IDSLC +  ++KA+EL  +M  
Sbjct: 333 LCGSERKSEALNLVKEM----EEKGI--KPNIHTYTVLIDSLCSQCKLEKARELLGQMLE 386

Query: 222 RGINPAVVVCTTLIHGFC----------------------------------CAGNWEEV 247
           +G+ P V+    LI+G+C                                  C  N  + 
Sbjct: 387 KGLMPNVITYNALINGYCKRGMIEDALDVVELMESRNLRPNTRTYNELIKGYCKRNVHKA 446

Query: 248 NGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDG 307
            G+  +ML+    P+++T+N +ID  C+ G  + A  LL LM  RGL PD +TY S++D 
Sbjct: 447 MGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDPWTYTSMIDS 506

Query: 308 YCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQT 367
            C   R++ A ++F S+  K     VV Y  LI+GYCK   V EA  +  +++S      
Sbjct: 507 LCKSKRVEEACDLFDSLEQKDVIPNVVMYTALIDGYCKAGKVNEAHLMLEKMLSKNCLPN 566

Query: 368 VITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFH 427
            +T+N L+ GL   G+   A  L ++M   +++P +ST  ILI  L K+     A + F 
Sbjct: 567 SLTFNALIHGLCTDGKLKEATLLEEKMVKIDLQPTVSTDTILIHRLLKDGDFDHAYRRFQ 626

Query: 428 MLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKG 487
            +  +  +     +   I   C+ GRL +A ++  K+ + G+ P + TYS +I G    G
Sbjct: 627 QMLSSGTKPDAHTYTTFIQTYCREGRLQDAEDMVAKMKENGVSPDLFTYSSLIKGYGDLG 686

Query: 488 KLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTT 547
           +   A   L  M   GC P+  TF +L+   L+  K  KV     K  EP   ++ +   
Sbjct: 687 RTNSAFVVLKRMHDTGCEPSQHTFLSLIKHLLE-MKYGKV-----KGGEPGVCVMSNMME 740

Query: 548 FSIVVDLLAK 557
           F IVV+LL K
Sbjct: 741 FDIVVELLEK 750



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 119/413 (28%), Positives = 214/413 (51%), Gaps = 21/413 (5%)

Query: 152 VITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDK 211
           V +Y +L+      G + V  ++   M         I   +  + ++ +  LC++   D+
Sbjct: 123 VYSYASLLTLLINNGYVGVVFKIRLLM---------IKSCDSVADTLFVLDLCRKMNKDE 173

Query: 212 AKELFLEMKGRGINPAVVVC-TTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMI 270
           + EL  ++        ++ C  TL++     G  +E+  +++EML+    PN+ T+N M+
Sbjct: 174 SFELKYKL--------IIGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMV 225

Query: 271 DCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCK 330
           +  CK G + EAN  + ++++ GL+PD FTY SL+ GYC    +D+A ++F  M  KGC+
Sbjct: 226 NGYCKVGNVEEANQYVSMIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFKEMPLKGCR 285

Query: 331 HTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKL 390
              V+Y  LI+G C    ++EAM L+ ++  +    TV TY  L+  L  + +   A  L
Sbjct: 286 RNEVAYTHLIHGLCVERRIDEAMDLFVKMKDDDCYPTVRTYTVLIKALCGSERKSEALNL 345

Query: 391 FDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCK 450
             EM+   ++P++ TY +LID LC    +++A +L   +        +  +N LI+G CK
Sbjct: 346 VKEMEEKGIKPNIHTYTVLIDSLCSQCKLEKARELLGQMLEKGLMPNVITYNALINGYCK 405

Query: 451 AGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVT 510
            G +++A ++   +  + L P   TY+ +I G C++  + KA   L  M +    P+VVT
Sbjct: 406 RGMIEDALDVVELMESRNLRPNTRTYNELIKGYCKRN-VHKAMGVLNKMLERKVLPDVVT 464

Query: 511 FNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
           +N+L+ G  ++        LL  M   +R LVPD  T++ ++D L K ++  E
Sbjct: 465 YNSLIDGQCRSGNFDSAYRLLSLMN--DRGLVPDPWTYTSMIDSLCKSKRVEE 515



 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 134/501 (26%), Positives = 236/501 (47%), Gaps = 36/501 (7%)

Query: 37  PETQ-LNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVI 95
           P T+  NE +   CK    N+++A      M   +  P + ++N L     ++ ++D+  
Sbjct: 426 PNTRTYNELIKGYCKR---NVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAY 482

Query: 96  SFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITY 155
                +   GL+PD  T   +I+        LC   R++EA  LF ++    V P+V+ Y
Sbjct: 483 RLLSLMNDRGLVPDPWTYTSMID-------SLCKSKRVEEACDLFDSLEQKDVIPNVVMY 535

Query: 156 GTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKEL 215
             LI+G+C+ G ++ A  + +KM+S   +N L    N  +++ +I  LC +G + +A  L
Sbjct: 536 TALIDGYCKAGKVNEAHLMLEKMLS---KNCL---PNSLTFNALIHGLCTDGKLKEATLL 589

Query: 216 FLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCK 275
             +M    + P V   T LIH     G+++     F +ML  G +P+  T+   I   C+
Sbjct: 590 EEKMVKIDLQPTVSTDTILIHRLLKDGDFDHAYRRFQQMLSSGTKPDAHTYTTFIQTYCR 649

Query: 276 GGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVS 335
            G++ +A  ++  M + G++PD FTY+SL+ GY  +GR ++A  +   MH  GC+ +  +
Sbjct: 650 EGRLQDAEDMVAKMKENGVSPDLFTYSSLIKGYGDLGRTNSAFVVLKRMHDTGCEPSQHT 709

Query: 336 YNILIN---------------GYCKILNVEE---AMSLYRQIISNGVRQTVITYNTLLSG 377
           +  LI                G C + N+ E    + L  +++ +GV     +Y  L+ G
Sbjct: 710 FLSLIKHLLEMKYGKVKGGEPGVCVMSNMMEFDIVVELLEKMVEHGVTPNAKSYEKLMLG 769

Query: 378 LFQAGQAGYAQKLFDEMKLYN-VEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEF 436
           + + G    A+K+FD M+    + P    +N L+   CK     EA K+   +       
Sbjct: 770 ICEIGNLRVAEKVFDHMQQKEGISPSELVFNALLSCCCKLEKHNEAAKVVDDMICVGHLP 829

Query: 437 GIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFL 496
            +E    LI  L K G  +    +F  L Q G     + + I+I G+ ++G +E   +  
Sbjct: 830 QLESCKILICRLYKKGEKERGTSVFQNLLQCGYYDDELAWKIIIDGVGKQGLVEAFYELF 889

Query: 497 LYMEKNGCAPNVVTFNTLMHG 517
             MEKNGC  +  T++ L+ G
Sbjct: 890 NVMEKNGCTFSSQTYSLLIEG 910



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 140/506 (27%), Positives = 227/506 (44%), Gaps = 58/506 (11%)

Query: 57  NEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNIL 116
           +EA      M      P I ++ +L  ++      +       +++  GL+P+ +T N L
Sbjct: 340 SEALNLVKEMEEKGIKPNIHTYTVLIDSLCSQCKLEKARELLGQMLEKGLMPNVITYNAL 399

Query: 117 INCFGNKE----------------------------RGLCVENRIKEATWLFKNMIAFGV 148
           IN +  +                             +G C  N + +A  +   M+   V
Sbjct: 400 INGYCKRGMIEDALDVVELMESRNLRPNTRTYNELIKGYCKRN-VHKAMGVLNKMLERKV 458

Query: 149 RPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGL 208
            PDV+TY +LI+G CR+GN   A RL   M     + GL+   + ++Y+ +IDSLCK   
Sbjct: 459 LPDVVTYNSLIDGQCRSGNFDSAYRLLSLM----NDRGLVP--DPWTYTSMIDSLCKSKR 512

Query: 209 VDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNV 268
           V++A +LF  ++ + + P VV+ T LI G+C AG   E + +  +ML     PN LTFN 
Sbjct: 513 VEEACDLFDSLEQKDVIPNVVMYTALIDGYCKAGKVNEAHLMLEKMLSKNCLPNSLTFNA 572

Query: 269 MIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKG 328
           +I  LC  GK+ EA  L E M++  L P   T   L+      G  D A   F  M S G
Sbjct: 573 LIHGLCTDGKLKEATLLEEKMVKIDLQPTVSTDTILIHRLLKDGDFDHAYRRFQQMLSSG 632

Query: 329 CKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQ 388
            K    +Y   I  YC+   +++A  +  ++  NGV   + TY++L+ G    G+   A 
Sbjct: 633 TKPDAHTYTTFIQTYCREGRLQDAEDMVAKMKENGVSPDLFTYSSLIKGYGDLGRTNSAF 692

Query: 389 KLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEF-GIEIFNCLIDG 447
            +   M     EP   T+  LI                H+LEM   +  G E   C++  
Sbjct: 693 VVLKRMHDTGCEPSQHTFLSLIK---------------HLLEMKYGKVKGGEPGVCVMSN 737

Query: 448 LCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYM-EKNGCAP 506
           + +    D   EL  K+ + G+ P   +Y  ++ G+C  G L  A     +M +K G +P
Sbjct: 738 MME---FDIVVELLEKMVEHGVTPNAKSYEKLMLGICEIGNLRVAEKVFDHMQQKEGISP 794

Query: 507 NVVTFNTLMH---GFLQNNKTSKVVE 529
           + + FN L+       ++N+ +KVV+
Sbjct: 795 SELVFNALLSCCCKLEKHNEAAKVVD 820


>gi|449449675|ref|XP_004142590.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic-like [Cucumis sativus]
          Length = 581

 Score =  235 bits (599), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 148/519 (28%), Positives = 253/519 (48%), Gaps = 51/519 (9%)

Query: 9   CLFSSET-VSKVKLSSLFKSPRQIAAVSSPETQLNEFLHENCKSGIINLNEARYFFGYMT 67
           C FS++T +  V  S+ F+ P     + + +  L + L+ +C++G    NE+ YF   + 
Sbjct: 33  CRFSNKTHLRNVTSSAEFRQP-HFPNLDNRDAHLMKLLNRSCRAG--KHNESLYFLESVV 89

Query: 68  H--MQPS--------------------------------PPISSFNLLFGAVAKNRHYDA 93
               +P                                 P + S+N +    +K    D+
Sbjct: 90  SKGFKPDVVLCTKLIKGFFNSRNLKKAMRVMEILETYGDPDVYSYNAMISGFSKANQIDS 149

Query: 94  VISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVI 153
               + ++ S G  PD +T NI+I         LC   +++ A  +   ++  G +P VI
Sbjct: 150 ANQVFDRMRSRGFSPDVVTYNIMIG-------SLCSRGKLELAFEVMDELLKDGCKPSVI 202

Query: 154 TYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAK 213
           TY  LI      G ++ AL L  ++VS     GL  + ++++Y+ II  +CKEG+ D+A 
Sbjct: 203 TYTILIEATILEGRINEALELFDELVS----RGL--RPDLYTYNAIIRGICKEGMEDRAL 256

Query: 214 ELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCL 273
           +    +  RG NP VV    L+  F     WE+   L  +M+  G  PN++T +++I   
Sbjct: 257 DFVRHLSARGCNPDVVSYNILLRSFLNKSRWEDGERLMKDMVLSGCEPNVVTHSILISSF 316

Query: 274 CKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTV 333
           C+ G++ EA  +LE+M ++GL PD ++Y+ L+  +C  GR+D A E    M S GC   +
Sbjct: 317 CREGRVREAVNVLEVMKEKGLTPDSYSYDPLISAFCKEGRLDLAIEYLEKMVSDGCLPDI 376

Query: 334 VSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDE 393
           V+YN ++   CK    + A+ ++ ++   G   TV  YNT+ S L+  G    A ++  E
Sbjct: 377 VNYNTILATLCKFGCADLALDVFEKLDEVGCPPTVRAYNTMFSALWSCGNKIKALEMISE 436

Query: 394 MKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGR 453
           M    ++PD  TYN LI  LC++  V EA+ L   +E  +F+  +  FN ++ G+CKA R
Sbjct: 437 MIRKGIDPDEITYNSLISCLCRDGLVDEAIGLLVDMEATRFQPTVISFNIVLLGMCKAHR 496

Query: 454 LDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKA 492
           +    EL   + +KG +P   +Y ++I G+   G   +A
Sbjct: 497 VFEGIELLITMVEKGCLPNETSYVLLIEGIAYAGWRAEA 535



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 129/482 (26%), Positives = 236/482 (48%), Gaps = 46/482 (9%)

Query: 128 CVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVS-GDYENG 186
           C   +  E+ +  +++++ G +PDV+    LI GF  + NL  A+R+ + + + GD    
Sbjct: 73  CRAGKHNESLYFLESVVSKGFKPDVVLCTKLIKGFFNSRNLKKAMRVMEILETYGD---- 128

Query: 187 LISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEE 246
                +++SY+ +I    K   +D A ++F  M+ RG +P VV    +I   C  G  E 
Sbjct: 129 ----PDVYSYNAMISGFSKANQIDSANQVFDRMRSRGFSPDVVTYNIMIGSLCSRGKLEL 184

Query: 247 VNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMD 306
              +  E+L  G +P+++T+ ++I+     G+INEA  L + ++ RGL PD +TYN+++ 
Sbjct: 185 AFEVMDELLKDGCKPSVITYTILIEATILEGRINEALELFDELVSRGLRPDLYTYNAIIR 244

Query: 307 GYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQ 366
           G C  G  D A +    + ++GC   VVSYNIL+  +      E+   L + ++ +G   
Sbjct: 245 GICKEGMEDRALDFVRHLSARGCNPDVVSYNILLRSFLNKSRWEDGERLMKDMVLSGCEP 304

Query: 367 TVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLF 426
            V+T++ L+S   + G+   A  + + MK   + PD  +Y+ LI   CK   +  A++  
Sbjct: 305 NVVTHSILISSFCREGRVREAVNVLEVMKEKGLTPDSYSYDPLISAFCKEGRLDLAIEYL 364

Query: 427 HMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTV------------- 473
             +  +     I  +N ++  LCK G  D A ++F KL + G  PTV             
Sbjct: 365 EKMVSDGCLPDIVNYNTILATLCKFGCADLALDVFEKLDEVGCPPTVRAYNTMFSALWSC 424

Query: 474 ----------------------VTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTF 511
                                 +TY+ +I  LCR G +++A   L+ ME     P V++F
Sbjct: 425 GNKIKALEMISEMIRKGIDPDEITYNSLISCLCRDGLVDEAIGLLVDMEATRFQPTVISF 484

Query: 512 NTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKSS 571
           N ++ G  + ++  + +ELL  M   E+  +P++T++ ++++ +A      E   ++ S 
Sbjct: 485 NIVLLGMCKAHRVFEGIELLITMV--EKGCLPNETSYVLLIEGIAYAGWRAEAMELANSL 542

Query: 572 YR 573
           YR
Sbjct: 543 YR 544



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 103/395 (26%), Positives = 191/395 (48%), Gaps = 38/395 (9%)

Query: 199 IIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLG 258
           +++  C+ G  +++      +  +G  P VV+CT LI GF  + N ++   + +E+L+  
Sbjct: 68  LLNRSCRAGKHNESLYFLESVVSKGFKPDVVLCTKLIKGFFNSRNLKKAMRV-MEILETY 126

Query: 259 PRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAR 318
             P++ ++N MI    K  +I+ AN + + M  RG +PD  TYN ++   C  G+++ A 
Sbjct: 127 GDPDVYSYNAMISGFSKANQIDSANQVFDRMRSRGFSPDVVTYNIMIGSLCSRGKLELAF 186

Query: 319 EIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGL 378
           E+   +   GCK +V++Y ILI        + EA+ L+ +++S G+R  + TYN ++ G+
Sbjct: 187 EVMDELLKDGCKPSVITYTILIEATILEGRINEALELFDELVSRGLRPDLYTYNAIIRGI 246

Query: 379 FQAGQAGYA-----------------------------------QKLFDEMKLYNVEPDL 403
            + G    A                                   ++L  +M L   EP++
Sbjct: 247 CKEGMEDRALDFVRHLSARGCNPDVVSYNILLRSFLNKSRWEDGERLMKDMVLSGCEPNV 306

Query: 404 STYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHK 463
            T++ILI   C+   V+EAV +  +++          ++ LI   CK GRLD A E   K
Sbjct: 307 VTHSILISSFCREGRVREAVNVLEVMKEKGLTPDSYSYDPLISAFCKEGRLDLAIEYLEK 366

Query: 464 LPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNK 523
           +   G +P +V Y+ ++  LC+ G  + A D    +++ GC P V  +NT+         
Sbjct: 367 MVSDGCLPDIVNYNTILATLCKFGCADLALDVFEKLDEVGCPPTVRAYNTMFSALWSCGN 426

Query: 524 TSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKD 558
             K +E++ +M    + + PD+ T++ ++  L +D
Sbjct: 427 KIKALEMISEMI--RKGIDPDEITYNSLISCLCRD 459



 Score =  154 bits (390), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 103/367 (28%), Positives = 175/367 (47%), Gaps = 26/367 (7%)

Query: 41  LNEFLHENCKSGIIN-------------LNEARYFFGYMTHMQPSPPISSFNLLFGAVAK 87
           ++E L + CK  +I              +NEA   F  +      P + ++N +   + K
Sbjct: 189 MDELLKDGCKPSVITYTILIEATILEGRINEALELFDELVSRGLRPDLYTYNAIIRGICK 248

Query: 88  NRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFG 147
               D  + F R L + G  PD ++ NIL+  F NK       +R ++   L K+M+  G
Sbjct: 249 EGMEDRALDFVRHLSARGCNPDVVSYNILLRSFLNK-------SRWEDGERLMKDMVLSG 301

Query: 148 VRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEG 207
             P+V+T+  LI+ FCR G +  A+ + + M     E GL   +  +SY  +I + CKEG
Sbjct: 302 CEPNVVTHSILISSFCREGRVREAVNVLEVM----KEKGLTPDS--YSYDPLISAFCKEG 355

Query: 208 LVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFN 267
            +D A E   +M   G  P +V   T++   C  G  +    +F ++ ++G  P +  +N
Sbjct: 356 RLDLAIEYLEKMVSDGCLPDIVNYNTILATLCKFGCADLALDVFEKLDEVGCPPTVRAYN 415

Query: 268 VMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSK 327
            M   L   G   +A  ++  MI++G++PD  TYNSL+   C  G +D A  + + M + 
Sbjct: 416 TMFSALWSCGNKIKALEMISEMIRKGIDPDEITYNSLISCLCRDGLVDEAIGLLVDMEAT 475

Query: 328 GCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYA 387
             + TV+S+NI++ G CK   V E + L   ++  G      +Y  L+ G+  AG    A
Sbjct: 476 RFQPTVISFNIVLLGMCKAHRVFEGIELLITMVEKGCLPNETSYVLLIEGIAYAGWRAEA 535

Query: 388 QKLFDEM 394
            +L + +
Sbjct: 536 MELANSL 542



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 98/357 (27%), Positives = 164/357 (45%), Gaps = 13/357 (3%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
           P + ++ +L  A       +  +  + +LVS GL PD  T N +I       RG+C E  
Sbjct: 199 PSVITYTILIEATILEGRINEALELFDELVSRGLRPDLYTYNAII-------RGICKEGM 251

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
              A    +++ A G  PDV++Y  L+  F          RL K MV    E       N
Sbjct: 252 EDRALDFVRHLSARGCNPDVVSYNILLRSFLNKSRWEDGERLMKDMVLSGCE------PN 305

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
           + ++SI+I S C+EG V +A  +   MK +G+ P       LI  FC  G  +       
Sbjct: 306 VVTHSILISSFCREGRVREAVNVLEVMKEKGLTPDSYSYDPLISAFCKEGRLDLAIEYLE 365

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
           +M+  G  P+++ +N ++  LCK G  + A  + E + + G  P    YN++       G
Sbjct: 366 KMVSDGCLPDIVNYNTILATLCKFGCADLALDVFEKLDEVGCPPTVRAYNTMFSALWSCG 425

Query: 313 RIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYN 372
               A E+   M  KG     ++YN LI+  C+   V+EA+ L   + +   + TVI++N
Sbjct: 426 NKIKALEMISEMIRKGIDPDEITYNSLISCLCRDGLVDEAIGLLVDMEATRFQPTVISFN 485

Query: 373 TLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHML 429
            +L G+ +A +     +L   M      P+ ++Y +LI+G+       EA++L + L
Sbjct: 486 IVLLGMCKAHRVFEGIELLITMVEKGCLPNETSYVLLIEGIAYAGWRAEAMELANSL 542



 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 64/246 (26%), Positives = 106/246 (43%), Gaps = 15/246 (6%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           C+ G   + EA      M     +P   S++ L  A  K    D  I +  K+VS G LP
Sbjct: 317 CREG--RVREAVNVLEVMKEKGLTPDSYSYDPLISAFCKEGRLDLAIEYLEKMVSDGCLP 374

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           D +  N ++         LC       A  +F+ +   G  P V  Y T+ +     GN 
Sbjct: 375 DIVNYNTILAT-------LCKFGCADLALDVFEKLDEVGCPPTVRAYNTMFSALWSCGNK 427

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
             AL +  +M+    +   I+      Y+ +I  LC++GLVD+A  L ++M+     P V
Sbjct: 428 IKALEMISEMIRKGIDPDEIT------YNSLISCLCRDGLVDEAIGLLVDMEATRFQPTV 481

Query: 229 VVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLEL 288
           +    ++ G C A    E   L I M++ G  PN  ++ ++I+ +   G   EA  L   
Sbjct: 482 ISFNIVLLGMCKAHRVFEGIELLITMVEKGCLPNETSYVLLIEGIAYAGWRAEAMELANS 541

Query: 289 MIQRGL 294
           + + G+
Sbjct: 542 LYRLGV 547


>gi|356544378|ref|XP_003540629.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Glycine max]
          Length = 903

 Score =  235 bits (599), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 147/523 (28%), Positives = 260/523 (49%), Gaps = 39/523 (7%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILI-------NCFGNKER 125
           P + + + L   + K R +  V   + + V+ G+ PD  T + ++       +    KE+
Sbjct: 188 PEVRTLSALLNGLLKVRKFITVWELFDESVNAGVRPDPYTCSAVVRSMCELKDFLRAKEK 247

Query: 126 ---------------------GLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCR 164
                                GLC  +R+ EA  + +++   G+  DV+TY TL+ GFCR
Sbjct: 248 IRWMEANGFDLSIVTYNVLIHGLCKGDRVSEAVEVKRSLGGKGLAADVVTYCTLVLGFCR 307

Query: 165 TGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGI 224
                  ++L  +MV   +     S T   + S ++D L K+G +D A EL +++   G 
Sbjct: 308 LQQFEAGIQLMDEMVELGF-----SPTEA-AVSGLVDGLRKQGKIDDAYELVVKVGRFGF 361

Query: 225 NPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANG 284
            P + V   LI+  C  G+ ++   L+  M  +  RPN +T++++ID  C+ G+++ A  
Sbjct: 362 VPNLFVYNALINSLCKGGDLDKAELLYSNMSLMNLRPNGITYSILIDSFCRSGRLDVAIS 421

Query: 285 LLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYC 344
             + MIQ G+    + YNSL++G C  G +  A  +F+ M +KG + T  ++  LI+GYC
Sbjct: 422 YFDRMIQDGIGETVYAYNSLINGQCKFGDLSAAESLFIEMTNKGVEPTATTFTSLISGYC 481

Query: 345 KILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLS 404
           K L V++A  LY ++I NG+   V T+  L+SGL    +   A +LFDE+    ++P   
Sbjct: 482 KDLQVQKAFKLYNKMIDNGITPNVYTFTALISGLCSTNKMAEASELFDELVERKIKPTEV 541

Query: 405 TYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKL 464
           TYN+LI+G C++  + +A +L   +           +  LI GLC  GR+  A +    L
Sbjct: 542 TYNVLIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLISGLCSTGRVSKAKDFIDDL 601

Query: 465 PQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKT 524
            ++ +    + YS ++HG C++G+L +A      M + G   ++V    L+ G L+    
Sbjct: 602 HKQNVKLNEMCYSALLHGYCQEGRLMEALSASCEMIQRGINMDLVCHAVLIDGALKQPDR 661

Query: 525 SKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKD---EKYHEC 564
               +LL  M   ++ L PD+  ++ ++D  +K+   +K  EC
Sbjct: 662 KTFFDLLKDMH--DQGLRPDNVIYTSMIDTYSKEGSFKKAFEC 702



 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 147/460 (31%), Positives = 241/460 (52%), Gaps = 18/460 (3%)

Query: 78  FNLLF-GAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEA 136
           FNLL    V  +R +DAV+   + + +  LLP+  TL+ L+N       GL    +    
Sbjct: 158 FNLLVQNYVLSSRIFDAVV-IVKLMFANNLLPEVRTLSALLN-------GLLKVRKFITV 209

Query: 137 TWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSY 196
             LF   +  GVRPD  T   ++   C   +   A    K+ +     NG     +I +Y
Sbjct: 210 WELFDESVNAGVRPDPYTCSAVVRSMCELKDFLRA----KEKIRWMEANGF--DLSIVTY 263

Query: 197 SIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLD 256
           +++I  LCK   V +A E+   + G+G+   VV   TL+ GFC    +E    L  EM++
Sbjct: 264 NVLIHGLCKGDRVSEAVEVKRSLGGKGLAADVVTYCTLVLGFCRLQQFEAGIQLMDEMVE 323

Query: 257 LGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDT 316
           LG  P     + ++D L K GKI++A  L+  + + G  P+ F YN+L++  C  G +D 
Sbjct: 324 LGFSPTEAAVSGLVDGLRKQGKIDDAYELVVKVGRFGFVPNLFVYNALINSLCKGGDLDK 383

Query: 317 AREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLS 376
           A  ++ +M     +   ++Y+ILI+ +C+   ++ A+S + ++I +G+ +TV  YN+L++
Sbjct: 384 AELLYSNMSLMNLRPNGITYSILIDSFCRSGRLDVAISYFDRMIQDGIGETVYAYNSLIN 443

Query: 377 GLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEF 436
           G  + G    A+ LF EM    VEP  +T+  LI G CK+  VQ+A KL++ +  N    
Sbjct: 444 GQCKFGDLSAAESLFIEMTNKGVEPTATTFTSLISGYCKDLQVQKAFKLYNKMIDNGITP 503

Query: 437 GIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFL 496
            +  F  LI GLC   ++  A ELF +L ++ + PT VTY+++I G CR GK++KA + L
Sbjct: 504 NVYTFTALISGLCSTNKMAEASELFDELVERKIKPTEVTYNVLIEGYCRDGKIDKAFELL 563

Query: 497 LYMEKNGCAPNVVTFNTLMHGFLQNNKTSKV---VELLHK 533
             M + G  P+  T+  L+ G     + SK    ++ LHK
Sbjct: 564 EDMHQKGLVPDTYTYRPLISGLCSTGRVSKAKDFIDDLHK 603



 Score =  221 bits (563), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 146/556 (26%), Positives = 255/556 (45%), Gaps = 84/556 (15%)

Query: 66  MTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKER 125
           M  +  SP  ++ + L   + K    D       K+   G +P+    N LIN       
Sbjct: 321 MVELGFSPTEAAVSGLVDGLRKQGKIDDAYELVVKVGRFGFVPNLFVYNALIN------- 373

Query: 126 GLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYEN 185
            LC    + +A  L+ NM    +RP+ ITY  LI+ FCR+G L VA+    +M+    ++
Sbjct: 374 SLCKGGDLDKAELLYSNMSLMNLRPNGITYSILIDSFCRSGRLDVAISYFDRMI----QD 429

Query: 186 GLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFC------ 239
           G+     +++Y+ +I+  CK G +  A+ LF+EM  +G+ P     T+LI G+C      
Sbjct: 430 GI--GETVYAYNSLINGQCKFGDLSAAESLFIEMTNKGVEPTATTFTSLISGYCKDLQVQ 487

Query: 240 ----------------------------CAGN-WEEVNGLFIEMLDLGPRPNLLTFNVMI 270
                                       C+ N   E + LF E+++   +P  +T+NV+I
Sbjct: 488 KAFKLYNKMIDNGITPNVYTFTALISGLCSTNKMAEASELFDELVERKIKPTEVTYNVLI 547

Query: 271 DCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCK 330
           +  C+ GKI++A  LLE M Q+GL PD +TY  L+ G C  GR+  A++    +H +  K
Sbjct: 548 EGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLISGLCSTGRVSKAKDFIDDLHKQNVK 607

Query: 331 HTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKL 390
              + Y+ L++GYC+   + EA+S   ++I  G+   ++ +  L+ G  +         L
Sbjct: 608 LNEMCYSALLHGYCQEGRLMEALSASCEMIQRGINMDLVCHAVLIDGALKQPDRKTFFDL 667

Query: 391 FDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCK 450
             +M    + PD   Y  +ID   K    ++A + + ++   +    +  +  L++GLCK
Sbjct: 668 LKDMHDQGLRPDNVIYTSMIDTYSKEGSFKKAFECWDLMVTEECFPNVVTYTALMNGLCK 727

Query: 451 AGRLDNAWELFHKLPQ----------------------------------KGLVPTVVTY 476
           AG +D A  LF ++                                    KGL+   VT+
Sbjct: 728 AGEMDRAGLLFKRMQAANVPPNSITYGCFLDNLTKEGNMKEAIGLHHAMLKGLLANTVTH 787

Query: 477 SIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAE 536
           +I+I G C+ G+  +A   L  M +NG  P+ VT++TL++ + ++      V+L   M  
Sbjct: 788 NIIIRGFCKLGRFHEATKVLSEMTENGIFPDCVTYSTLIYEYCRSGNVGASVKLWDTML- 846

Query: 537 PERNLVPDDTTFSIVV 552
             R L PD   +++++
Sbjct: 847 -NRGLEPDLVAYNLLI 861



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 144/539 (26%), Positives = 251/539 (46%), Gaps = 53/539 (9%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
           N  ++  CK G  +L++A   +  M+ M   P   ++++L  +  ++   D  IS++ ++
Sbjct: 369 NALINSLCKGG--DLDKAELLYSNMSLMNLRPNGITYSILIDSFCRSGRLDVAISYFDRM 426

Query: 102 VSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLING 161
           +  G+       N LIN       G C    +  A  LF  M   GV P   T+ +LI+G
Sbjct: 427 IQDGIGETVYAYNSLIN-------GQCKFGDLSAAESLFIEMTNKGVEPTATTFTSLISG 479

Query: 162 FCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKG 221
           +C+   +  A +L+ KM+    +NG+    N+++++ +I  LC    + +A ELF E+  
Sbjct: 480 YCKDLQVQKAFKLYNKMI----DNGITP--NVYTFTALISGLCSTNKMAEASELFDELVE 533

Query: 222 RGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINE 281
           R I P  V    LI G+C  G  ++   L  +M   G  P+  T+  +I  LC  G++++
Sbjct: 534 RKIKPTEVTYNVLIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLISGLCSTGRVSK 593

Query: 282 ANGLLELMIQRGLNPDRFTYNSLMDGYCLVGR--------------------------ID 315
           A   ++ + ++ +  +   Y++L+ GYC  GR                          ID
Sbjct: 594 AKDFIDDLHKQNVKLNEMCYSALLHGYCQEGRLMEALSASCEMIQRGINMDLVCHAVLID 653

Query: 316 TA-----REIFL----SMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQ 366
            A     R+ F      MH +G +   V Y  +I+ Y K  + ++A   +  +++     
Sbjct: 654 GALKQPDRKTFFDLLKDMHDQGLRPDNVIYTSMIDTYSKEGSFKKAFECWDLMVTEECFP 713

Query: 367 TVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLF 426
            V+TY  L++GL +AG+   A  LF  M+  NV P+  TY   +D L K   ++EA+ L 
Sbjct: 714 NVVTYTALMNGLCKAGEMDRAGLLFKRMQAANVPPNSITYGCFLDNLTKEGNMKEAIGLH 773

Query: 427 HMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRK 486
           H + +          N +I G CK GR   A ++  ++ + G+ P  VTYS +I+  CR 
Sbjct: 774 HAM-LKGLLANTVTHNIIIRGFCKLGRFHEATKVLSEMTENGIFPDCVTYSTLIYEYCRS 832

Query: 487 GKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDD 545
           G +  +      M   G  P++V +N L++G   N +  K  EL   M    R ++PD+
Sbjct: 833 GNVGASVKLWDTMLNRGLEPDLVAYNLLIYGCCVNGELDKAFELRDDML--RRGIIPDN 889



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 99/343 (28%), Positives = 167/343 (48%), Gaps = 4/343 (1%)

Query: 226 PAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGL 285
           P V   + L++G      +  V  LF E ++ G RP+  T + ++  +C+      A   
Sbjct: 188 PEVRTLSALLNGLLKVRKFITVWELFDESVNAGVRPDPYTCSAVVRSMCELKDFLRAKEK 247

Query: 286 LELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCK 345
           +  M   G +    TYN L+ G C   R+  A E+  S+  KG    VV+Y  L+ G+C+
Sbjct: 248 IRWMEANGFDLSIVTYNVLIHGLCKGDRVSEAVEVKRSLGGKGLAADVVTYCTLVLGFCR 307

Query: 346 ILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLST 405
           +   E  + L  +++  G   T    + L+ GL + G+   A +L  ++  +   P+L  
Sbjct: 308 LQQFEAGIQLMDEMVELGFSPTEAAVSGLVDGLRKQGKIDDAYELVVKVGRFGFVPNLFV 367

Query: 406 YNILIDGLCKNNCVQEAVKLF-HMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKL 464
           YN LI+ LCK   + +A  L+ +M  MN    GI  ++ LID  C++GRLD A   F ++
Sbjct: 368 YNALINSLCKGGDLDKAELLYSNMSLMNLRPNGI-TYSILIDSFCRSGRLDVAISYFDRM 426

Query: 465 PQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKT 524
            Q G+  TV  Y+ +I+G C+ G L  A    + M   G  P   TF +L+ G+ ++ + 
Sbjct: 427 IQDGIGETVYAYNSLINGQCKFGDLSAAESLFIEMTNKGVEPTATTFTSLISGYCKDLQV 486

Query: 525 SKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAV 567
            K  +L +KM   +  + P+  TF+ ++  L    K  E S +
Sbjct: 487 QKAFKLYNKMI--DNGITPNVYTFTALISGLCSTNKMAEASEL 527



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 73/294 (24%), Positives = 130/294 (44%), Gaps = 22/294 (7%)

Query: 265 TFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSM 324
           ++ +M+  L        AN LL  ++ R  +P +  ++  +D Y                
Sbjct: 105 SYAIMVHALVHSRLFWPANSLLHTLLLRESHP-KCVFSHFLDSY---------------- 147

Query: 325 HSKGCK-HTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQ 383
             K CK  + + +N+L+  Y     + +A+ + + + +N +   V T + LL+GL +  +
Sbjct: 148 --KRCKFSSTLGFNLLVQNYVLSSRIFDAVVIVKLMFANNLLPEVRTLSALLNGLLKVRK 205

Query: 384 AGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNC 443
                +LFDE     V PD  T + ++  +C+      A +    +E N F+  I  +N 
Sbjct: 206 FITVWELFDESVNAGVRPDPYTCSAVVRSMCELKDFLRAKEKIRWMEANGFDLSIVTYNV 265

Query: 444 LIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNG 503
           LI GLCK  R+  A E+   L  KGL   VVTY  ++ G CR  + E     +  M + G
Sbjct: 266 LIHGLCKGDRVSEAVEVKRSLGGKGLAADVVTYCTLVLGFCRLQQFEAGIQLMDEMVELG 325

Query: 504 CAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAK 557
            +P     + L+ G  +  K     EL+ K+       VP+   ++ +++ L K
Sbjct: 326 FSPTEAAVSGLVDGLRKQGKIDDAYELVVKVG--RFGFVPNLFVYNALINSLCK 377


>gi|75191658|sp|Q9M9X9.1|PPR18_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g06710, mitochondrial; Flags: Precursor
 gi|7523709|gb|AAF63148.1|AC011001_18 Hypothetical protein [Arabidopsis thaliana]
          Length = 987

 Score =  235 bits (599), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 147/540 (27%), Positives = 262/540 (48%), Gaps = 62/540 (11%)

Query: 71  PSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCF-GNKE----- 124
           PSP I  FN L  A   +  +       +K+V  G +P ++  NILI    G+K+     
Sbjct: 370 PSPKI--FNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCD 427

Query: 125 ----------------------------RGLCVENRIKEATWLFKNMIAFGVRPDVITYG 156
                                       R LC   + ++A  + + MI  G  PD  TY 
Sbjct: 428 LLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYS 487

Query: 157 TLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELF 216
            ++N  C    + +A  L ++M  G    GL++  ++++Y+I++DS CK GL+++A++ F
Sbjct: 488 KVLNYLCNASKMELAFLLFEEMKRG----GLVA--DVYTYTIMVDSFCKAGLIEQARKWF 541

Query: 217 LEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKG 276
            EM+  G  P VV  T LIH +  A      N LF  ML  G  PN++T++ +ID  CK 
Sbjct: 542 NEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKA 601

Query: 277 GKINEANGLLELMI----------------QRGLNPDRFTYNSLMDGYCLVGRIDTAREI 320
           G++ +A  + E M                      P+  TY +L+DG+C   R++ AR++
Sbjct: 602 GQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKL 661

Query: 321 FLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQ 380
             +M  +GC+   + Y+ LI+G CK+  ++EA  +  ++  +G   T+ TY++L+   F+
Sbjct: 662 LDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFK 721

Query: 381 AGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEI 440
             +   A K+  +M   +  P++  Y  +IDGLCK     EA KL  M+E    +  +  
Sbjct: 722 VKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVT 781

Query: 441 FNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYME 500
           +  +IDG    G+++   EL  ++  KG+ P  VTY ++I   C+ G L+ A++ L  M+
Sbjct: 782 YTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMK 841

Query: 501 KNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEK 560
           +     +   +  ++ GF  N +  + + LL ++ +   +  P  + + +++D L K ++
Sbjct: 842 QTHWPTHTAGYRKVIEGF--NKEFIESLGLLDEIGQD--DTAPFLSVYRLLIDNLIKAQR 897



 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 166/619 (26%), Positives = 280/619 (45%), Gaps = 88/619 (14%)

Query: 3   SRTQFRCLFSS-ETVSKVKLSSLFKSPRQIAAVSSPETQLNEFLHENCKSG----IINLN 57
           SR+ + CL  +     ++  +SL      +A +      L  F +  CK G     + L 
Sbjct: 234 SRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREALTLV 293

Query: 58  EARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILI 117
           E   F          P    +  L   + +   ++  + F  ++ +   LP+ +T + L+
Sbjct: 294 ETENFV---------PDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLL 344

Query: 118 -NCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHK 176
             C   K+ G C          +   M+  G  P    + +L++ +C +G+ S A +L K
Sbjct: 345 CGCLNKKQLGRC--------KRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLK 396

Query: 177 KMVSGDYENGLISKTNIFSYSIIIDSLCKE------GLVDKAKELFLEMKGRGINPAVVV 230
           KMV   +  G +       Y+I+I S+C +       L+D A++ + EM   G+    + 
Sbjct: 397 KMVKCGHMPGYV------VYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKIN 450

Query: 231 CTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMI 290
            ++     C AG +E+   +  EM+  G  P+  T++ +++ LC   K+  A  L E M 
Sbjct: 451 VSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMK 510

Query: 291 QRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVE 350
           + GL  D +TY  ++D +C  G I+ AR+ F  M   GC   VV+Y  LI+ Y K   V 
Sbjct: 511 RGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVS 570

Query: 351 EAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEM-------------KLY 397
            A  L+  ++S G    ++TY+ L+ G  +AGQ   A ++F+ M             K Y
Sbjct: 571 YANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQY 630

Query: 398 N---VEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRL 454
           +     P++ TY  L+DG CK++ V+EA KL   + M   E    +++ LIDGLCK G+L
Sbjct: 631 DDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKL 690

Query: 455 DNAWELFHKLPQKGL-----------------------------------VPTVVTYSIM 479
           D A E+  ++ + G                                     P VV Y+ M
Sbjct: 691 DEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEM 750

Query: 480 IHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPER 539
           I GLC+ GK ++A   +  ME+ GC PNVVT+  ++ GF    K    +ELL +M    +
Sbjct: 751 IDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMG--SK 808

Query: 540 NLVPDDTTFSIVVDLLAKD 558
            + P+  T+ +++D   K+
Sbjct: 809 GVAPNYVTYRVLIDHCCKN 827



 Score =  195 bits (495), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 131/467 (28%), Positives = 233/467 (49%), Gaps = 28/467 (5%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CK+G+I   +AR +F  M  +  +P + ++  L  A  K +        +  ++S G LP
Sbjct: 529 CKAGLIE--QARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLP 586

Query: 109 DFLTLNILINCF---GNKERG------LCVENRIKEATWLFKNMIAFGVRPDVITYGTLI 159
           + +T + LI+     G  E+       +C    + +    FK       RP+V+TYG L+
Sbjct: 587 NIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALL 646

Query: 160 NGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEM 219
           +GFC++  +  A +L   M     E       N   Y  +ID LCK G +D+A+E+  EM
Sbjct: 647 DGFCKSHRVEEARKLLDAMSMEGCE------PNQIVYDALIDGLCKVGKLDEAQEVKTEM 700

Query: 220 KGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKI 279
              G    +   ++LI  +      +  + +  +ML+    PN++ +  MID LCK GK 
Sbjct: 701 SEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKT 760

Query: 280 NEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNIL 339
           +EA  L+++M ++G  P+  TY +++DG+ ++G+I+T  E+   M SKG     V+Y +L
Sbjct: 761 DEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVL 820

Query: 340 INGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNV 399
           I+  CK   ++ A +L  ++           Y  ++ G  +         L DE+   + 
Sbjct: 821 IDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFIESLG--LLDEIGQDDT 878

Query: 400 EPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGI----EIFNCLIDGLCKAGRLD 455
            P LS Y +LID L K   ++ A++L    E+  F   +      +N LI+ LC A +++
Sbjct: 879 APFLSVYRLLIDNLIKAQRLEMALRLLE--EVATFSATLVDYSSTYNSLIESLCLANKVE 936

Query: 456 NAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKA---NDFLLYM 499
            A++LF ++ +KG++P + ++  +I GL R  K+ +A    DF+ +M
Sbjct: 937 TAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLLDFISHM 983



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 132/499 (26%), Positives = 207/499 (41%), Gaps = 70/499 (14%)

Query: 146 FGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCK 205
           F  RP   TY  LI  F +   L  A  +H++M   +       + + F+      SLCK
Sbjct: 229 FRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANL------RMDGFTLRCFAYSLCK 282

Query: 206 EGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLT 265
            G   K +E    ++     P  V  T LI G C A  +EE       M      PN++T
Sbjct: 283 VG---KWREALTLVETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVT 339

Query: 266 FNVMIDCLCKGGK-INEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSM 324
           ++ ++ C C   K +     +L +M+  G  P    +NSL+  YC  G    A ++   M
Sbjct: 340 YSTLL-CGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKM 398

Query: 325 HSKGCKHTVVSYNILINGYCK-------------------------ILN----------- 348
              G     V YNILI   C                          +LN           
Sbjct: 399 VKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCL 458

Query: 349 -----VEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDL 403
                 E+A S+ R++I  G      TY+ +L+ L  A +   A  LF+EMK   +  D+
Sbjct: 459 CSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADV 518

Query: 404 STYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHK 463
            TY I++D  CK   +++A K F+ +        +  +  LI    KA ++  A ELF  
Sbjct: 519 YTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFET 578

Query: 464 LPQKGLVPTVVTYSIMIHGLCRKGKLEKA-------------NDFLLYMEK---NGCAPN 507
           +  +G +P +VTYS +I G C+ G++EKA              D  +Y ++   N   PN
Sbjct: 579 MLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPN 638

Query: 508 VVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAV 567
           VVT+  L+ GF ++++  +  +LL  M+       P+   +  ++D L K  K  E   V
Sbjct: 639 VVTYGALLDGFCKSHRVEEARKLLDAMS--MEGCEPNQIVYDALIDGLCKVGKLDEAQEV 696

Query: 568 SKSSYRACLYVTIFQPSSL 586
                      T++  SSL
Sbjct: 697 KTEMSEHGFPATLYTYSSL 715



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 85/374 (22%), Positives = 139/374 (37%), Gaps = 81/374 (21%)

Query: 256 DLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRID 315
           D   RP+  T+N +I    K  +++ A+ +   M    L  D FT        C VG+  
Sbjct: 228 DFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKW- 286

Query: 316 TAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLL 375
             RE    + ++      V Y  LI+G C+    EEAM    ++ +      V+TY+TLL
Sbjct: 287 --REALTLVETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLL 344

Query: 376 SGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFE 435
            G     Q G  +++ + M +    P    +N L+   C +     A KL   +      
Sbjct: 345 CGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHM 404

Query: 436 FGIEIFNCLIDG-----------------------------------------LCKAGRL 454
            G  ++N LI                                           LC AG+ 
Sbjct: 405 PGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKY 464

Query: 455 DNAWELFHKLPQKGLVP-----------------------------------TVVTYSIM 479
           + A+ +  ++  +G +P                                    V TY+IM
Sbjct: 465 EKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIM 524

Query: 480 IHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPER 539
           +   C+ G +E+A  +   M + GC PNVVT+  L+H +L+  K S   EL   M     
Sbjct: 525 VDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETML--SE 582

Query: 540 NLVPDDTTFSIVVD 553
             +P+  T+S ++D
Sbjct: 583 GCLPNIVTYSALID 596



 Score = 82.4 bits (202), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 66/239 (27%), Positives = 107/239 (44%), Gaps = 9/239 (3%)

Query: 301 YNSLMDGYCLVGRIDTAR--EIFLSMHSKGCKHTVVSY-NILINGYCKILNVEEAMSLYR 357
           YN+L+D   L+ R D  +  E FL       K     + N+L+  +C+  +   A+    
Sbjct: 168 YNALVD---LIVRDDDEKVPEEFLQQIRDDDKEVFGEFLNVLVRKHCRNGSFSIALEELG 224

Query: 358 QIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNN 417
           ++     R +  TYN L+    +A +   A  +  EM L N+  D  T       LCK  
Sbjct: 225 RLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVG 284

Query: 418 CVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYS 477
             +EA+ L   +E   F      +  LI GLC+A   + A +  +++     +P VVTYS
Sbjct: 285 KWREALTL---VETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYS 341

Query: 478 IMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAE 536
            ++ G   K +L +    L  M   GC P+   FN+L+H +  +   S   +LL KM +
Sbjct: 342 TLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVK 400



 Score = 82.4 bits (202), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 75/303 (24%), Positives = 127/303 (41%), Gaps = 15/303 (4%)

Query: 266 FNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMH 325
            NV++   C+ G  + A   L  +      P R TYN L+  +    R+D+A  I   M 
Sbjct: 203 LNVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMS 262

Query: 326 SKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAG 385
               +    +        CK+    EA++L      N V  TV  Y  L+SGL +A    
Sbjct: 263 LANLRMDGFTLRCFAYSLCKVGKWREALTLVE--TENFVPDTVF-YTKLISGLCEASLFE 319

Query: 386 YAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLI 445
            A    + M+  +  P++ TY+ L+ G      +    ++ +M+ M       +IFN L+
Sbjct: 320 EAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLV 379

Query: 446 DGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKAN-DFLLYMEK--- 501
              C +G    A++L  K+ + G +P  V Y+I+I  +C  G  +  N D L   EK   
Sbjct: 380 HAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSIC--GDKDSLNCDLLDLAEKAYS 437

Query: 502 ----NGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAK 557
                G   N +  ++         K  K   ++ +M    +  +PD +T+S V++ L  
Sbjct: 438 EMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMI--GQGFIPDTSTYSKVLNYLCN 495

Query: 558 DEK 560
             K
Sbjct: 496 ASK 498


>gi|356503775|ref|XP_003520679.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
           mitochondrial-like [Glycine max]
          Length = 777

 Score =  235 bits (599), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 142/507 (28%), Positives = 253/507 (49%), Gaps = 41/507 (8%)

Query: 56  LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNI 115
           L+EA   +  M      P   S N L   +  +RH++  ++ +  ++  G  PD +    
Sbjct: 103 LDEATDLYSTMRKDGFVPSTRSVNRLLRTLVDSRHFEKTLAVFADVIDSGTRPDAVAYGK 162

Query: 116 LINC---FGNKER-------------------------GLCVENRIKEATWLFKNMIAFG 147
            +       + ++                         GLC   RIK+A  LF  MI   
Sbjct: 163 AVQAAVMLKDLDKGFELMKSMVKDGMGPSVFAYNLVLGGLCKVRRIKDARKLFDEMIQRN 222

Query: 148 VRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEG 207
           + P+ +TY TLI+G+C+ G +  AL   ++M   + E       N+ +Y+ +++ LC  G
Sbjct: 223 MVPNTVTYNTLIDGYCKVGGIEEALGFKERMKEQNVE------CNLVTYNSLLNGLCGSG 276

Query: 208 LVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFN 267
            VD A+E+ LEM+G G  P   +          AG+    +G  I       R +  T+ 
Sbjct: 277 RVDDAREVLLEMEGSGFLPGGFLSFVFDDHSNGAGDDGLFDGKEI-------RIDERTYC 329

Query: 268 VMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSK 327
           ++++ LC+ G+I +A  +L  +++ G+ P + +YN L++ YC  G +  A      M  +
Sbjct: 330 ILLNGLCRVGRIEKAEEVLAKLVENGVTPSKISYNILVNAYCQEGDVKKAILTTEQMEER 389

Query: 328 GCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYA 387
           G +   +++N +I+ +C+   V+ A +  R+++  GV  TV TYN+L++G  Q G     
Sbjct: 390 GLEPNRITFNTVISKFCETGEVDHAETWVRRMVEKGVSPTVETYNSLINGYGQKGHFVRC 449

Query: 388 QKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDG 447
            +  DEM    ++P++ +Y  LI+ LCK+  + +A  +   +         EI+N LI+ 
Sbjct: 450 FEFLDEMDKAGIKPNVISYGSLINCLCKDRKLIDAEIVLADMIGRGVSPNAEIYNMLIEA 509

Query: 448 LCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPN 507
            C   +L +A+  F ++ Q G+  T+VTY+ +I+GL R G+++KA D  L M   GC P+
Sbjct: 510 SCSLSKLKDAFRFFDEMIQSGIDATLVTYNTLINGLGRNGRVKKAEDLFLQMAGKGCNPD 569

Query: 508 VVTFNTLMHGFLQNNKTSKVVELLHKM 534
           V+T+N+L+ G+ ++  T K +EL  KM
Sbjct: 570 VITYNSLISGYAKSVNTQKCLELYDKM 596



 Score =  195 bits (495), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 135/537 (25%), Positives = 254/537 (47%), Gaps = 67/537 (12%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
           P + ++NL+ G + K R        + +++   ++P+ +T N LI+       G C    
Sbjct: 190 PSVFAYNLVLGGLCKVRRIKDARKLFDEMIQRNMVPNTVTYNTLID-------GYCKVGG 242

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKM-------------V 179
           I+EA    + M    V  +++TY +L+NG C +G +  A  +  +M             V
Sbjct: 243 IEEALGFKERMKEQNVECNLVTYNSLLNGLCGSGRVDDAREVLLEMEGSGFLPGGFLSFV 302

Query: 180 SGDYENGLIS---------KTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVV 230
             D+ NG            + +  +Y I+++ LC+ G ++KA+E+  ++   G+ P+ + 
Sbjct: 303 FDDHSNGAGDDGLFDGKEIRIDERTYCILLNGLCRVGRIEKAEEVLAKLVENGVTPSKIS 362

Query: 231 CTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMI 290
              L++ +C  G+ ++      +M + G  PN +TFN +I   C+ G+++ A   +  M+
Sbjct: 363 YNILVNAYCQEGDVKKAILTTEQMEERGLEPNRITFNTVISKFCETGEVDHAETWVRRMV 422

Query: 291 QRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSY-------------- 336
           ++G++P   TYNSL++GY   G      E    M   G K  V+SY              
Sbjct: 423 EKGVSPTVETYNSLINGYGQKGHFVRCFEFLDEMDKAGIKPNVISYGSLINCLCKDRKLI 482

Query: 337 ---------------------NILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLL 375
                                N+LI   C +  +++A   + ++I +G+  T++TYNTL+
Sbjct: 483 DAEIVLADMIGRGVSPNAEIYNMLIEASCSLSKLKDAFRFFDEMIQSGIDATLVTYNTLI 542

Query: 376 SGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFE 435
           +GL + G+   A+ LF +M      PD+ TYN LI G  K+   Q+ ++L+  +++   +
Sbjct: 543 NGLGRNGRVKKAEDLFLQMAGKGCNPDVITYNSLISGYAKSVNTQKCLELYDKMKILGIK 602

Query: 436 FGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDF 495
             +  F+ LI    K G +    ++F ++ Q  LVP    Y+ MI+     G + KA   
Sbjct: 603 PTVGTFHPLIYACRKEGVV-TMDKMFQEMLQMDLVPDQFVYNEMIYSYAEDGNVMKAMSL 661

Query: 496 LLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVV 552
              M   G   + VT+N+L+  +L++ + S++  L+  M    + LVP   T++I++
Sbjct: 662 HQQMVDQGVDCDKVTYNSLILAYLRDRRVSEIKHLVDDM--KAKGLVPKVDTYNILI 716



 Score =  179 bits (453), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 125/421 (29%), Positives = 207/421 (49%), Gaps = 14/421 (3%)

Query: 100 KLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLI 159
           KLV  G+ P  ++ NIL+N +       C E  +K+A    + M   G+ P+ IT+ T+I
Sbjct: 350 KLVENGVTPSKISYNILVNAY-------CQEGDVKKAILTTEQMEERGLEPNRITFNTVI 402

Query: 160 NGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEM 219
           + FC TG +  A    ++MV    E G +S T + +Y+ +I+   ++G   +  E   EM
Sbjct: 403 SKFCETGEVDHAETWVRRMV----EKG-VSPT-VETYNSLINGYGQKGHFVRCFEFLDEM 456

Query: 220 KGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKI 279
              GI P V+   +LI+  C      +   +  +M+  G  PN   +N++I+  C   K+
Sbjct: 457 DKAGIKPNVISYGSLINCLCKDRKLIDAEIVLADMIGRGVSPNAEIYNMLIEASCSLSKL 516

Query: 280 NEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNIL 339
            +A    + MIQ G++    TYN+L++G    GR+  A ++FL M  KGC   V++YN L
Sbjct: 517 KDAFRFFDEMIQSGIDATLVTYNTLINGLGRNGRVKKAEDLFLQMAGKGCNPDVITYNSL 576

Query: 340 INGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNV 399
           I+GY K +N ++ + LY ++   G++ TV T++ L+    + G      K+F EM   ++
Sbjct: 577 ISGYAKSVNTQKCLELYDKMKILGIKPTVGTFHPLIYACRKEGVV-TMDKMFQEMLQMDL 635

Query: 400 EPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWE 459
            PD   YN +I    ++  V +A+ L   +     +     +N LI    +  R+     
Sbjct: 636 VPDQFVYNEMIYSYAEDGNVMKAMSLHQQMVDQGVDCDKVTYNSLILAYLRDRRVSEIKH 695

Query: 460 LFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFL 519
           L   +  KGLVP V TY+I+I GLC       A  +   M + G   NV     L+ G  
Sbjct: 696 LVDDMKAKGLVPKVDTYNILIKGLCDLKDFNGAYFWYREMVERGLLLNVSMCYQLISGLR 755

Query: 520 Q 520
           +
Sbjct: 756 E 756



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 138/560 (24%), Positives = 228/560 (40%), Gaps = 114/560 (20%)

Query: 68  HMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGL 127
           H   S P  S NLL+   + ++  D     Y  +   G +P   ++N L+       R L
Sbjct: 81  HAHVSKPFFSDNLLW-LCSVSKMLDEATDLYSTMRKDGFVPSTRSVNRLL-------RTL 132

Query: 128 CVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGL 187
                 ++   +F ++I  G RPD + YG  +                            
Sbjct: 133 VDSRHFEKTLAVFADVIDSGTRPDAVAYGKAVQA-------------------------- 166

Query: 188 ISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEV 247
                    ++++  L      DK  EL   M   G+ P+V     ++ G C     ++ 
Sbjct: 167 ---------AVMLKDL------DKGFELMKSMVKDGMGPSVFAYNLVLGGLCKVRRIKDA 211

Query: 248 NGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDG 307
             LF EM+     PN +T+N +ID  CK G I EA G  E M ++ +  +  TYNSL++G
Sbjct: 212 RKLFDEMIQRNMVPNTVTYNTLIDGYCKVGGIEEALGFKERMKEQNVECNLVTYNSLLNG 271

Query: 308 YCLVGRIDTAREIFLSM-----------------HSKGCKHTVV-----------SYNIL 339
            C  GR+D ARE+ L M                 HS G     +           +Y IL
Sbjct: 272 LCGSGRVDDAREVLLEMEGSGFLPGGFLSFVFDDHSNGAGDDGLFDGKEIRIDERTYCIL 331

Query: 340 INGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNV 399
           +NG C++  +E+A  +  +++ NGV  + I+YN L++   Q G    A    ++M+   +
Sbjct: 332 LNGLCRVGRIEKAEEVLAKLVENGVTPSKISYNILVNAYCQEGDVKKAILTTEQMEERGL 391

Query: 400 EPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWE 459
           EP+  T+N +I   C+   V  A      +        +E +N LI+G  + G     +E
Sbjct: 392 EPNRITFNTVISKFCETGEVDHAETWVRRMVEKGVSPTVETYNSLINGYGQKGHFVRCFE 451

Query: 460 LFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPN------------ 507
              ++ + G+ P V++Y  +I+ LC+  KL  A   L  M   G +PN            
Sbjct: 452 FLDEMDKAGIKPNVISYGSLINCLCKDRKLIDAEIVLADMIGRGVSPNAEIYNMLIEASC 511

Query: 508 -----------------------VVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPD 544
                                  +VT+NTL++G  +N +  K  +L  +MA    N  PD
Sbjct: 512 SLSKLKDAFRFFDEMIQSGIDATLVTYNTLINGLGRNGRVKKAEDLFLQMAGKGCN--PD 569

Query: 545 DTTFSIVVDLLAKDEKYHEC 564
             T++ ++   AK     +C
Sbjct: 570 VITYNSLISGYAKSVNTQKC 589



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 121/455 (26%), Positives = 192/455 (42%), Gaps = 49/455 (10%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           C+ G I   +A      +     +P   S+N+L  A  +       I    ++   GL P
Sbjct: 336 CRVGRIE--KAEEVLAKLVENGVTPSKISYNILVNAYCQEGDVKKAILTTEQMEERGLEP 393

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           + +T N +I+ F       C    +  A    + M+  GV P V TY +LING+ + G+ 
Sbjct: 394 NRITFNTVISKF-------CETGEVDHAETWVRRMVEKGVSPTVETYNSLINGYGQKGHF 446

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
                   +M           K N+ SY  +I+ LCK+  +  A+ +  +M GRG++P  
Sbjct: 447 VRCFEFLDEMDKAGI------KPNVISYGSLINCLCKDRKLIDAEIVLADMIGRGVSPNA 500

Query: 229 VVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLEL 288
            +   LI   C     ++    F EM+  G    L+T+N +I+ L + G++ +A  L   
Sbjct: 501 EIYNMLIEASCSLSKLKDAFRFFDEMIQSGIDATLVTYNTLINGLGRNGRVKKAEDLFLQ 560

Query: 289 MIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVS------------- 335
           M  +G NPD  TYNSL+ GY          E++  M   G K TV +             
Sbjct: 561 MAGKGCNPDVITYNSLISGYAKSVNTQKCLELYDKMKILGIKPTVGTFHPLIYACRKEGV 620

Query: 336 ---------------------YNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTL 374
                                YN +I  Y +  NV +AMSL++Q++  GV    +TYN+L
Sbjct: 621 VTMDKMFQEMLQMDLVPDQFVYNEMIYSYAEDGNVMKAMSLHQQMVDQGVDCDKVTYNSL 680

Query: 375 LSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKF 434
           +    +  +    + L D+MK   + P + TYNILI GLC       A   +  +     
Sbjct: 681 ILAYLRDRRVSEIKHLVDDMKAKGLVPKVDTYNILIKGLCDLKDFNGAYFWYREMVERGL 740

Query: 435 EFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGL 469
              + +   LI GL + G L  A  +  +L   GL
Sbjct: 741 LLNVSMCYQLISGLREEGMLREAQIVSSELSIGGL 775



 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 99/390 (25%), Positives = 175/390 (44%), Gaps = 49/390 (12%)

Query: 41  LNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRK 100
            N  + + C++G   ++ A  +   M     SP + ++N L     +  H+     F  +
Sbjct: 398 FNTVISKFCETG--EVDHAETWVRRMVEKGVSPTVETYNSLINGYGQKGHFVRCFEFLDE 455

Query: 101 LVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLIN 160
           +   G+ P+ ++   LINC       LC + ++ +A  +  +MI  GV P+   Y  LI 
Sbjct: 456 MDKAGIKPNVISYGSLINC-------LCKDRKLIDAEIVLADMIGRGVSPNAEIYNMLIE 508

Query: 161 GFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMK 220
             C    L  A R   +M+    +  L++      Y+ +I+ L + G V KA++LFL+M 
Sbjct: 509 ASCSLSKLKDAFRFFDEMIQSGIDATLVT------YNTLINGLGRNGRVKKAEDLFLQMA 562

Query: 221 GRGINPAVVVCTTLIHGFCCAGNWEE---------------------------------- 246
           G+G NP V+   +LI G+  + N ++                                  
Sbjct: 563 GKGCNPDVITYNSLISGYAKSVNTQKCLELYDKMKILGIKPTVGTFHPLIYACRKEGVVT 622

Query: 247 VNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMD 306
           ++ +F EML +   P+   +N MI    + G + +A  L + M+ +G++ D+ TYNSL+ 
Sbjct: 623 MDKMFQEMLQMDLVPDQFVYNEMIYSYAEDGNVMKAMSLHQQMVDQGVDCDKVTYNSLIL 682

Query: 307 GYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQ 366
            Y    R+   + +   M +KG    V +YNILI G C + +   A   YR+++  G+  
Sbjct: 683 AYLRDRRVSEIKHLVDDMKAKGLVPKVDTYNILIKGLCDLKDFNGAYFWYREMVERGLLL 742

Query: 367 TVITYNTLLSGLFQAGQAGYAQKLFDEMKL 396
            V     L+SGL + G    AQ +  E+ +
Sbjct: 743 NVSMCYQLISGLREEGMLREAQIVSSELSI 772



 Score = 65.5 bits (158), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 55/240 (22%), Positives = 107/240 (44%), Gaps = 14/240 (5%)

Query: 56  LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNI 115
           + +A   F  M     +P + ++N L    AK+ +    +  Y K+  +G+ P   T + 
Sbjct: 551 VKKAEDLFLQMAGKGCNPDVITYNSLISGYAKSVNTQKCLELYDKMKILGIKPTVGTFHP 610

Query: 116 LINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLH 175
           LI  +  ++ G+   ++      +F+ M+   + PD   Y  +I  +   GN+  A+ LH
Sbjct: 611 LI--YACRKEGVVTMDK------MFQEMLQMDLVPDQFVYNEMIYSYAEDGNVMKAMSLH 662

Query: 176 KKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLI 235
           ++MV    +       +  +Y+ +I +  ++  V + K L  +MK +G+ P V     LI
Sbjct: 663 QQMVDQGVD------CDKVTYNSLILAYLRDRRVSEIKHLVDDMKAKGLVPKVDTYNILI 716

Query: 236 HGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLN 295
            G C   ++      + EM++ G   N+     +I  L + G + EA  +   +   GLN
Sbjct: 717 KGLCDLKDFNGAYFWYREMVERGLLLNVSMCYQLISGLREEGMLREAQIVSSELSIGGLN 776


>gi|218196467|gb|EEC78894.1| hypothetical protein OsI_19266 [Oryza sativa Indica Group]
 gi|222630938|gb|EEE63070.1| hypothetical protein OsJ_17878 [Oryza sativa Japonica Group]
          Length = 939

 Score =  235 bits (599), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 143/515 (27%), Positives = 264/515 (51%), Gaps = 16/515 (3%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
           N  L++  +SG   +  A   +G M      P   +  ++  A  ++      + F  ++
Sbjct: 187 NRLLNKLVQSGDPGM--AAMVYGQMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEM 244

Query: 102 VSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLING 161
             +GL  + +  + +++C+       C     ++A  + +++   G+ P+V+TY  L+ G
Sbjct: 245 EGMGLEVNLVAYHAVMDCY-------CGMGWTEDARRILESLQRKGLSPNVVTYTLLVKG 297

Query: 162 FCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKG 221
           +C+ G +  A R+ K+M     E G I    + +Y ++I+  C+ G +D A  +  EM+ 
Sbjct: 298 YCKDGRMEEAERVVKEM----KETGDIVVDEV-AYGMMINGYCQRGRMDDATRVRNEMRD 352

Query: 222 RGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINE 281
            GI+  + V  T+I+G C  G  EEV  +  EM D+G RP+  ++N +ID  C+ G + +
Sbjct: 353 AGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRK 412

Query: 282 ANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILIN 341
           A  +  +M++ GL     TYN+L+ G+C +  ID A  ++  M  +G     +S + L++
Sbjct: 413 AFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLD 472

Query: 342 GYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEP 401
           G  K    E+A++L+++ ++ G+ + VIT+NT+++GL + G+   A++L D MK     P
Sbjct: 473 GLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPP 532

Query: 402 DLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELF 461
           D  TY  L DG CK   +  A  L + +E   F   +E+FN  I G   A +     ++ 
Sbjct: 533 DSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIH 592

Query: 462 HKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQN 521
            ++  +GL P +VTY  +I G C++G L +A +    M  NG  PNV   + LM  F + 
Sbjct: 593 SEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKE 652

Query: 522 NKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLA 556
            K  +   +L K+   +  ++P  +  +I +D ++
Sbjct: 653 GKVDEANLVLQKLVNID--MIPGCSISTIEIDKIS 685



 Score =  212 bits (540), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 144/493 (29%), Positives = 243/493 (49%), Gaps = 41/493 (8%)

Query: 77  SFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEA 136
           ++N L          D  +  +  ++  G+ P+ ++ + L++       GL    + ++A
Sbjct: 431 TYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLD-------GLFKAGKTEQA 483

Query: 137 TWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSY 196
             L+K  +A G+  +VIT+ T+ING C+ G ++ A  L  +M        L    +  +Y
Sbjct: 484 LNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKE------LRCPPDSLTY 537

Query: 197 SIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLD 256
             + D  CK G +  A  L  +M+  G  P+V +  + I G   A  W +VN +  EM  
Sbjct: 538 RTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSA 597

Query: 257 LGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDT 316
            G  PNL+T+  +I   CK G ++EA  L   M+  G+NP+ F  ++LM  +   G++D 
Sbjct: 598 RGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDE 657

Query: 317 AREIFLSMHS----KGCK----------HTV------------VSYNILINGYCKILNVE 350
           A  +   + +     GC           H V            V +N++I G CK   + 
Sbjct: 658 ANLVLQKLVNIDMIPGCSISTIEIDKISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIA 717

Query: 351 EAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILI 410
           +A SL+  + +        TY++L+ G   +G    A  L D M    + P++ TYN LI
Sbjct: 718 DAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLI 777

Query: 411 DGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLV 470
            GLCK+  +  AV LF+ L+          +N LID  CK G+   A++L  K+ ++G+ 
Sbjct: 778 YGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGIQ 837

Query: 471 PTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVEL 530
           PTV+TYSI+I+GLC +G +E+A   L  M +N   PN +T+ TL+HG++++    ++ +L
Sbjct: 838 PTVITYSILIYGLCTQGYMEEAIKLLDQMIENNVDPNYITYCTLIHGYIKSGNMEEISKL 897

Query: 531 LHKMAEPERNLVP 543
             +M    R L+P
Sbjct: 898 YDEMH--IRGLLP 908



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 131/477 (27%), Positives = 226/477 (47%), Gaps = 39/477 (8%)

Query: 56  LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNI 115
           +++A   +  M     +P   S + L   + K    +  ++ +++ ++ GL  + +T N 
Sbjct: 445 IDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNT 504

Query: 116 LINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLH 175
           +IN       GLC   R+ EA  L   M      PD +TY TL +G+C+ G L  A  L 
Sbjct: 505 VIN-------GLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLM 557

Query: 176 KKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLI 235
            KM       G      +F+  I    + K+    K  ++  EM  RG++P +V    LI
Sbjct: 558 NKM----EHLGFAPSVEMFNSFITGHFIAKQW--HKVNDIHSEMSARGLSPNLVTYGALI 611

Query: 236 HGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLN 295
            G+C  GN  E   L+ EM++ G  PN+   + ++ C  K GK++EAN +L+ ++   + 
Sbjct: 612 AGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQKLVNIDMI 671

Query: 296 P---------DRFT-----------------YNSLMDGYCLVGRIDTAREIFLSMHSKGC 329
           P         D+ +                 +N ++ G C  GRI  A+ +F S+ +K  
Sbjct: 672 PGCSISTIEIDKISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIADAKSLFESLRNKRF 731

Query: 330 KHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQK 389
                +Y+ LI+G     +++EA SL   ++S G+   +ITYN+L+ GL ++G+   A  
Sbjct: 732 LPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVN 791

Query: 390 LFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLC 449
           LF++++   + P+  TYN LID  CK     EA KL   +     +  +  ++ LI GLC
Sbjct: 792 LFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGIQPTVITYSILIYGLC 851

Query: 450 KAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAP 506
             G ++ A +L  ++ +  + P  +TY  +IHG  + G +E+ +     M   G  P
Sbjct: 852 TQGYMEEAIKLLDQMIENNVDPNYITYCTLIHGYIKSGNMEEISKLYDEMHIRGLLP 908



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 107/403 (26%), Positives = 201/403 (49%), Gaps = 9/403 (2%)

Query: 152 VITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDK 211
            +++  L+      G LS AL +   M        +  + ++ S + +++ L + G    
Sbjct: 148 AVSFDLLLRAHADAGQLSSALNVFDGM------GKVGCRPSLRSCNRLLNKLVQSGDPGM 201

Query: 212 AKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMID 271
           A  ++ +M+  G+ P       +   +C  G   +      EM  +G   NL+ ++ ++D
Sbjct: 202 AAMVYGQMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMD 261

Query: 272 CLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKG-CK 330
           C C  G   +A  +LE + ++GL+P+  TY  L+ GYC  GR++ A  +   M   G   
Sbjct: 262 CYCGMGWTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIV 321

Query: 331 HTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKL 390
              V+Y ++INGYC+   +++A  +  ++   G+   +  YNT+++GL + G+    QK+
Sbjct: 322 VDEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKV 381

Query: 391 FDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCK 450
             EM+   + PD  +YN LIDG C+   +++A ++  M+  N        +N L+ G C 
Sbjct: 382 LQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCS 441

Query: 451 AGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVT 510
              +D+A  L+  + ++G+ P  ++ S ++ GL + GK E+A +        G A NV+T
Sbjct: 442 LHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVIT 501

Query: 511 FNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
           FNT+++G  +  + ++  ELL +M   E    PD  T+  + D
Sbjct: 502 FNTVINGLCKIGRMAEAEELLDRMK--ELRCPPDSLTYRTLFD 542



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 100/364 (27%), Positives = 181/364 (49%), Gaps = 3/364 (0%)

Query: 195 SYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEM 254
           S+ +++ +    G +  A  +F  M   G  P++  C  L++    +G+      ++ +M
Sbjct: 150 SFDLLLRAHADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGDPGMAAMVYGQM 209

Query: 255 LDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRI 314
              G  P+  T  +M    C+ G++ +A   +E M   GL  +   Y+++MD YC +G  
Sbjct: 210 RIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWT 269

Query: 315 DTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNG-VRQTVITYNT 373
           + AR I  S+  KG    VV+Y +L+ GYCK   +EEA  + +++   G +    + Y  
Sbjct: 270 EDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGM 329

Query: 374 LLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNK 433
           +++G  Q G+   A ++ +EM+   +  +L  YN +I+GLCK   ++E  K+   +E   
Sbjct: 330 MINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVG 389

Query: 434 FEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKAN 493
                  +N LIDG C+ G +  A+E+   + + GL  T +TY+ ++ G C    ++ A 
Sbjct: 390 MRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDAL 449

Query: 494 DFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
                M K G APN ++ +TL+ G  +  KT + + L  +     R L  +  TF+ V++
Sbjct: 450 RLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETL--ARGLAKNVITFNTVIN 507

Query: 554 LLAK 557
            L K
Sbjct: 508 GLCK 511



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 113/373 (30%), Positives = 181/373 (48%), Gaps = 29/373 (7%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CK G   L  A +    M H+  +P +  FN         + +  V   + ++ + GL P
Sbjct: 545 CKLG--QLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSP 602

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           + +T   LI        G C E  + EA  L+  M+  G+ P+V     L++ F + G +
Sbjct: 603 NLVTYGALIA-------GWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKV 655

Query: 169 SVALRLHKKMVSGDYENG----------------LISKTNIFS----YSIIIDSLCKEGL 208
             A  + +K+V+ D   G                 I+  N  S    +++II  LCK G 
Sbjct: 656 DEANLVLQKLVNIDMIPGCSISTIEIDKISHVVDTIADGNPHSANVMWNVIIFGLCKSGR 715

Query: 209 VDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNV 268
           +  AK LF  ++ +   P     ++LIHG   +G+ +E   L   ML  G  PN++T+N 
Sbjct: 716 IADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNS 775

Query: 269 MIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKG 328
           +I  LCK GK++ A  L   +  +G++P+  TYN+L+D YC  G+   A ++   M  +G
Sbjct: 776 LIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEG 835

Query: 329 CKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQ 388
            + TV++Y+ILI G C    +EEA+ L  Q+I N V    ITY TL+ G  ++G      
Sbjct: 836 IQPTVITYSILIYGLCTQGYMEEAIKLLDQMIENNVDPNYITYCTLIHGYIKSGNMEEIS 895

Query: 389 KLFDEMKLYNVEP 401
           KL+DEM +  + P
Sbjct: 896 KLYDEMHIRGLLP 908



 Score =  105 bits (261), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 79/256 (30%), Positives = 121/256 (47%), Gaps = 17/256 (6%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFN-LLFGAVAKNRHYDAVISFYRKLVSIGLL 107
           C    I +++  +    +    P      +N ++FG     R  DA  S +  L +   L
Sbjct: 674 CSISTIEIDKISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIADAK-SLFESLRNKRFL 732

Query: 108 PDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGN 167
           PD  T + LI+       G      I EA  L   M++ G+ P++ITY +LI G C++G 
Sbjct: 733 PDNFTYSSLIH-------GCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGK 785

Query: 168 LSVALRLHKKMVS-GDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINP 226
           LS A+ L  K+ S G   NG+       +Y+ +ID  CKEG   +A +L  +M   GI P
Sbjct: 786 LSRAVNLFNKLQSKGISPNGI-------TYNTLIDEYCKEGKTTEAFKLKQKMVEEGIQP 838

Query: 227 AVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLL 286
            V+  + LI+G C  G  EE   L  +M++    PN +T+  +I    K G + E + L 
Sbjct: 839 TVITYSILIYGLCTQGYMEEAIKLLDQMIENNVDPNYITYCTLIHGYIKSGNMEEISKLY 898

Query: 287 ELMIQRGLNPDRFTYN 302
           + M  RGL P  +  N
Sbjct: 899 DEMHIRGLLPTNWIGN 914



 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 50/206 (24%), Positives = 109/206 (52%), Gaps = 1/206 (0%)

Query: 332 TVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLF 391
           + VS+++L+  +     +  A++++  +   G R ++ + N LL+ L Q+G  G A  ++
Sbjct: 147 SAVSFDLLLRAHADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGDPGMAAMVY 206

Query: 392 DEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKA 451
            +M++  V PD  T  I+    C++  V +AV+    +E    E  +  ++ ++D  C  
Sbjct: 207 GQMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGM 266

Query: 452 GRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNG-CAPNVVT 510
           G  ++A  +   L +KGL P VVTY++++ G C+ G++E+A   +  M++ G    + V 
Sbjct: 267 GWTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVA 326

Query: 511 FNTLMHGFLQNNKTSKVVELLHKMAE 536
           +  +++G+ Q  +      + ++M +
Sbjct: 327 YGMMINGYCQRGRMDDATRVRNEMRD 352


>gi|38344241|emb|CAE02059.2| OJ991113_30.18 [Oryza sativa Japonica Group]
          Length = 736

 Score =  235 bits (599), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 161/552 (29%), Positives = 265/552 (48%), Gaps = 67/552 (12%)

Query: 41  LNEFLHENCKSGIINLNEARYFFGY-----MTHMQPSPPISSFNLLFGAVAKNRHYDAVI 95
            N  +H  C       NE  Y + Y     MT     P    +N+  G++          
Sbjct: 115 FNSLVHSYC-------NEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQE------ 161

Query: 96  SFYRKLVSIGLLPDFLTLN-------ILINCFGNK------ERGLCVENRIKEATWLFKN 142
               KL S    PD L L        +  NC  NK       R LC   +  +A  L K 
Sbjct: 162 ----KLPS----PDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKE 213

Query: 143 MIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKT-NIFSYSIIID 201
           M+  G  PD  TY  +I   C    +  A  L ++M        ++  T ++++Y+I+ID
Sbjct: 214 MMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEM-------KMVGVTPDVYTYTILID 266

Query: 202 SLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRP 261
           S CK GL+++A+ LF EM+  G +P VV  T LIH +  A    + N +F  M+D G RP
Sbjct: 267 SFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRP 326

Query: 262 NLLTFNVMIDCLCKGGKINEANGLLELMI----------------QRGLNPDRFTYNSLM 305
           N +T+  ++D LCK G I++A  +   +I                +  L P+  TY +L+
Sbjct: 327 NDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALV 386

Query: 306 DGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVR 365
           DG C   ++D A E+  +M S GC+   + Y+ LI+G+CK   ++ A  ++ Q+   G  
Sbjct: 387 DGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYL 446

Query: 366 QTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKL 425
            +V TY +L+  +F+ G+   A K+  +M   +  P++ TY  +IDGLC+    ++A+KL
Sbjct: 447 PSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKL 506

Query: 426 FHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCR 485
             ++E       +  +  LIDGL KAG++D + +LF ++ +KG  P  VTY ++I+ LC 
Sbjct: 507 LSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCA 566

Query: 486 KGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDD 545
            G L+KA   L  M++      +  +   + GF ++   S  + +L +M       VP  
Sbjct: 567 AGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIAS--LGILEEM--ESYGTVPIA 622

Query: 546 TTFSIVVDLLAK 557
             + +++D  +K
Sbjct: 623 PVYGMLIDCFSK 634



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 145/527 (27%), Positives = 242/527 (45%), Gaps = 62/527 (11%)

Query: 81  LFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKER--------------- 125
           +   + +  ++D  +SF  ++     +P+ +T   L++ F  K++               
Sbjct: 48  MISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEG 107

Query: 126 -------------GLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGN----- 167
                          C E     A  L   M   G  P  + Y   I   C         
Sbjct: 108 CNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPD 167

Query: 168 -LSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINP 226
            L +A +++ +M++    N +++K N+ +++     LC  G  DKA +L  EM  +G  P
Sbjct: 168 LLDLAEKIYGEMLAA---NCVLNKVNVANFA---RCLCGVGKFDKAFQLIKEMMRKGFVP 221

Query: 227 AVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLL 286
                + +I   C A   E+   LF EM  +G  P++ T+ ++ID  CK G I +A  L 
Sbjct: 222 DTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLF 281

Query: 287 ELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKI 346
           E M   G +P   TY +L+  Y    ++  A +IF  M   GC+   V+Y  L++G CK 
Sbjct: 282 EEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKA 341

Query: 347 LNVEEAMSLYRQIISNG----------------VRQTVITYNTLLSGLFQAGQAGYAQKL 390
            N+ +A  +Y ++I                   +   V+TY  L+ GL +A +  +A +L
Sbjct: 342 GNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHEL 401

Query: 391 FDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEF--GIEIFNCLIDGL 448
            D M     EP+   Y+ LIDG CK   +  A ++F  L+M K  +   +  +  LID +
Sbjct: 402 LDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVF--LQMTKCGYLPSVHTYTSLIDRM 459

Query: 449 CKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNV 508
            K GRLD A ++  ++ +    P VVTY+ MI GLCR G+ EKA   L  ME+ GC+PNV
Sbjct: 460 FKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNV 519

Query: 509 VTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLL 555
           VT+  L+ G  +  K    ++L  +M+   +   P+  T+ ++++ L
Sbjct: 520 VTYTALIDGLGKAGKIDLSLDLFTQMS--RKGCSPNYVTYRVLINHL 564



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 124/483 (25%), Positives = 223/483 (46%), Gaps = 52/483 (10%)

Query: 55  NLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLN 114
            + +A   F  M  +  +P + ++ +L  +  K    +     + ++ S+G  P  +T  
Sbjct: 238 KVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYT 297

Query: 115 ILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRL 174
            LI+ +   ++       + +A  +F  M+  G RP+ +TYG L++G C+ GN+S A  +
Sbjct: 298 ALIHAYLKAKQ-------VPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEV 350

Query: 175 HKKMV----SGDY------ENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGI 224
           + K++    S D       E+      N+ +Y  ++D LCK   VD A EL   M   G 
Sbjct: 351 YAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGC 410

Query: 225 NPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANG 284
            P  +V   LI GFC AG  +    +F++M   G  P++ T+  +ID + K G+++ A  
Sbjct: 411 EPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMK 470

Query: 285 LLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYC 344
           +L  M++    P+  TY +++DG C +G  + A ++   M  KGC   VV+Y  LI+G  
Sbjct: 471 VLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLG 530

Query: 345 KILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLS 404
           K   ++ ++ L+ Q+   G     +TY  L++ L  AG    A+ L  EMK       L 
Sbjct: 531 KAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQ 590

Query: 405 TYNILIDGLCKN---------------------------NCVQEAVKLFHMLEMNKFEFG 437
            Y   I G  K+                           +C  +A +L   +E++K    
Sbjct: 591 GYRCAIQGFSKSFIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMME 650

Query: 438 I--------EIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKL 489
           +        +++  LI  LC A +++ A+ L+ ++ ++G VP +  +  +I GL    K 
Sbjct: 651 VPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKW 710

Query: 490 EKA 492
           ++A
Sbjct: 711 DEA 713



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 130/536 (24%), Positives = 229/536 (42%), Gaps = 106/536 (19%)

Query: 117 INCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHK 176
           + CF +    LC E R  +A  + +       + D +    +I+G         A+    
Sbjct: 13  VGCFAH---ALCKEGRWADALDMIERE---DFKLDTVLCTHMISGLMEASYFDEAMSFLH 66

Query: 177 KMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIH 236
           +M      N  I   N+ +Y  ++    K+  +   K +   M   G NP   +  +L+H
Sbjct: 67  RMRC----NSCIP--NVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVH 120

Query: 237 GFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMID------------------------- 271
            +C   ++     L   M   G  P  + +N+ I                          
Sbjct: 121 SYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEML 180

Query: 272 ----------------CLCKGGKINEANGLLELMIQRG---------------------- 293
                           CLC  GK ++A  L++ M+++G                      
Sbjct: 181 AANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVE 240

Query: 294 -------------LNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILI 340
                        + PD +TY  L+D +C  G I+ A+ +F  M S GC  TVV+Y  LI
Sbjct: 241 KAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALI 300

Query: 341 NGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEM------ 394
           + Y K   V +A  ++ +++  G R   +TY  L+ GL +AG    A +++ ++      
Sbjct: 301 HAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDS 360

Query: 395 ----------KLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCL 444
                       + + P++ TY  L+DGLCK + V  A +L   +  +  E    +++ L
Sbjct: 361 ADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDAL 420

Query: 445 IDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGC 504
           IDG CKAG++D+A E+F ++ + G +P+V TY+ +I  + + G+L+ A   L  M K+ C
Sbjct: 421 IDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSC 480

Query: 505 APNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEK 560
            PNVVT+  ++ G  +  ++ K ++LL  M   E+   P+  T++ ++D L K  K
Sbjct: 481 TPNVVTYTAMIDGLCRIGESEKALKLLSLM--EEKGCSPNVVTYTALIDGLGKAGK 534



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 104/389 (26%), Positives = 168/389 (43%), Gaps = 27/389 (6%)

Query: 194 FSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIE 253
           F+      +LCKEG    A ++   ++        V+CT +I G   A  ++E       
Sbjct: 11  FTVGCFAHALCKEGRWADALDM---IEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHR 67

Query: 254 MLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGR 313
           M      PN++T+  ++    K  ++     ++ +M+  G NP+   +NSL+  YC    
Sbjct: 68  MRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKD 127

Query: 314 IDTAREIFLSMHSKGCKHTVVSYNILINGYC--------KILNVEEAMSLYRQIISNGVR 365
              A ++   M + GC    V YNI I   C         +L++ E   +Y ++++    
Sbjct: 128 YAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAE--KIYGEMLAANCV 185

Query: 366 QTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKL 425
              +        L   G+   A +L  EM      PD STY+ +I  LC    V++A  L
Sbjct: 186 LNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLL 245

Query: 426 FHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCR 485
           F  ++M      +  +  LID  CKAG ++ A  LF ++   G  PTVVTY+ +IH   +
Sbjct: 246 FQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLK 305

Query: 486 KGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKM----------- 534
             ++ +AND    M   GC PN VT+  L+ G  +    SK  E+  K+           
Sbjct: 306 AKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDF 365

Query: 535 ---AEPERNLVPDDTTFSIVVDLLAKDEK 560
               E    L P+  T+  +VD L K  K
Sbjct: 366 YFPCEDRHTLAPNVVTYGALVDGLCKAHK 394



 Score = 99.0 bits (245), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 83/350 (23%), Positives = 137/350 (39%), Gaps = 91/350 (26%)

Query: 289 MIQRGLNPDRFTYNSLMDGYCLVGRIDTA-----REIFLSMHSKGCKHTVVSYNILINGY 343
           M + G   DRFT        C  GR   A     RE F  + +  C H       +I+G 
Sbjct: 1   MSESGFCMDRFTVGCFAHALCKEGRWADALDMIEREDF-KLDTVLCTH-------MISGL 52

Query: 344 CKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDL 403
            +    +EAMS   ++  N     V+TY TLLSG  +  Q G+ +++ + M      P+ 
Sbjct: 53  MEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNP 112

Query: 404 STYNILIDGLCKNN-------------------------------CVQEAVKLFHMLEMN 432
           S +N L+   C                                  C QE +    +L++ 
Sbjct: 113 SLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLA 172

Query: 433 KFEFG-IEIFNCLIDG---------LCKAGRLDNAWELFHKLPQKGLV------------ 470
           +  +G +   NC+++          LC  G+ D A++L  ++ +KG V            
Sbjct: 173 EKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITF 232

Query: 471 -----------------------PTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPN 507
                                  P V TY+I+I   C+ G +E+A      M   GC+P 
Sbjct: 233 LCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPT 292

Query: 508 VVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAK 557
           VVT+  L+H +L+  +  +  ++ H+M +      P+D T+  +VD L K
Sbjct: 293 VVTYTALIHAYLKAKQVPQANDIFHRMVDA--GCRPNDVTYGALVDGLCK 340



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 70/311 (22%), Positives = 114/311 (36%), Gaps = 73/311 (23%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CK+G I+   A+  F  MT     P + ++  L   + K+   D  +    +++     P
Sbjct: 425 CKAGKID--SAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTP 482

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           + +T   +I+       GLC     ++A  L   M   G  P+V+TY  LI+G  + G +
Sbjct: 483 NVVTYTAMID-------GLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKI 535

Query: 169 SVAL----RLHKKMVSGDY-----------ENGLISKTNI-------------------- 193
            ++L    ++ +K  S +Y             GL+ K  +                    
Sbjct: 536 DLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCA 595

Query: 194 ---FS------------------------YSIIIDSLCKEGLVDKAKELFLEMK--GRGI 224
              FS                        Y ++ID   K G ++ A EL  EM      +
Sbjct: 596 IQGFSKSFIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSV 655

Query: 225 NPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANG 284
                +  +LI   C A   EE   L+ EM   G  P L  F  +I  L +  K +EA  
Sbjct: 656 KTDNDMYASLIQALCLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEALQ 715

Query: 285 LLELMIQRGLN 295
           L   +   G+N
Sbjct: 716 LCYGICHEGVN 726


>gi|334182346|ref|NP_172156.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332189906|gb|AEE28027.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 997

 Score =  234 bits (598), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 147/540 (27%), Positives = 262/540 (48%), Gaps = 62/540 (11%)

Query: 71  PSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCF-GNKE----- 124
           PSP I  FN L  A   +  +       +K+V  G +P ++  NILI    G+K+     
Sbjct: 370 PSPKI--FNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCD 427

Query: 125 ----------------------------RGLCVENRIKEATWLFKNMIAFGVRPDVITYG 156
                                       R LC   + ++A  + + MI  G  PD  TY 
Sbjct: 428 LLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYS 487

Query: 157 TLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELF 216
            ++N  C    + +A  L ++M  G    GL++  ++++Y+I++DS CK GL+++A++ F
Sbjct: 488 KVLNYLCNASKMELAFLLFEEMKRG----GLVA--DVYTYTIMVDSFCKAGLIEQARKWF 541

Query: 217 LEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKG 276
            EM+  G  P VV  T LIH +  A      N LF  ML  G  PN++T++ +ID  CK 
Sbjct: 542 NEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKA 601

Query: 277 GKINEANGLLELMI----------------QRGLNPDRFTYNSLMDGYCLVGRIDTAREI 320
           G++ +A  + E M                      P+  TY +L+DG+C   R++ AR++
Sbjct: 602 GQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKL 661

Query: 321 FLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQ 380
             +M  +GC+   + Y+ LI+G CK+  ++EA  +  ++  +G   T+ TY++L+   F+
Sbjct: 662 LDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFK 721

Query: 381 AGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEI 440
             +   A K+  +M   +  P++  Y  +IDGLCK     EA KL  M+E    +  +  
Sbjct: 722 VKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVT 781

Query: 441 FNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYME 500
           +  +IDG    G+++   EL  ++  KG+ P  VTY ++I   C+ G L+ A++ L  M+
Sbjct: 782 YTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMK 841

Query: 501 KNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEK 560
           +     +   +  ++ GF  N +  + + LL ++ +   +  P  + + +++D L K ++
Sbjct: 842 QTHWPTHTAGYRKVIEGF--NKEFIESLGLLDEIGQD--DTAPFLSVYRLLIDNLIKAQR 897



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 166/619 (26%), Positives = 280/619 (45%), Gaps = 88/619 (14%)

Query: 3   SRTQFRCLFSS-ETVSKVKLSSLFKSPRQIAAVSSPETQLNEFLHENCKSG----IINLN 57
           SR+ + CL  +     ++  +SL      +A +      L  F +  CK G     + L 
Sbjct: 234 SRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREALTLV 293

Query: 58  EARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILI 117
           E   F          P    +  L   + +   ++  + F  ++ +   LP+ +T + L+
Sbjct: 294 ETENFV---------PDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLL 344

Query: 118 -NCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHK 176
             C   K+ G C          +   M+  G  P    + +L++ +C +G+ S A +L K
Sbjct: 345 CGCLNKKQLGRCKR--------VLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLK 396

Query: 177 KMVSGDYENGLISKTNIFSYSIIIDSLCKE------GLVDKAKELFLEMKGRGINPAVVV 230
           KMV   +  G +       Y+I+I S+C +       L+D A++ + EM   G+    + 
Sbjct: 397 KMVKCGHMPGYV------VYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKIN 450

Query: 231 CTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMI 290
            ++     C AG +E+   +  EM+  G  P+  T++ +++ LC   K+  A  L E M 
Sbjct: 451 VSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMK 510

Query: 291 QRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVE 350
           + GL  D +TY  ++D +C  G I+ AR+ F  M   GC   VV+Y  LI+ Y K   V 
Sbjct: 511 RGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVS 570

Query: 351 EAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEM-------------KLY 397
            A  L+  ++S G    ++TY+ L+ G  +AGQ   A ++F+ M             K Y
Sbjct: 571 YANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQY 630

Query: 398 N---VEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRL 454
           +     P++ TY  L+DG CK++ V+EA KL   + M   E    +++ LIDGLCK G+L
Sbjct: 631 DDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKL 690

Query: 455 DNAWELFHKLPQKGL-----------------------------------VPTVVTYSIM 479
           D A E+  ++ + G                                     P VV Y+ M
Sbjct: 691 DEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEM 750

Query: 480 IHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPER 539
           I GLC+ GK ++A   +  ME+ GC PNVVT+  ++ GF    K    +ELL +M    +
Sbjct: 751 IDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMG--SK 808

Query: 540 NLVPDDTTFSIVVDLLAKD 558
            + P+  T+ +++D   K+
Sbjct: 809 GVAPNYVTYRVLIDHCCKN 827



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 132/468 (28%), Positives = 234/468 (50%), Gaps = 28/468 (5%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CK+G+I   +AR +F  M  +  +P + ++  L  A  K +        +  ++S G LP
Sbjct: 529 CKAGLIE--QARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLP 586

Query: 109 DFLTLNILINCF---GNKERG------LCVENRIKEATWLFKNMIAFGVRPDVITYGTLI 159
           + +T + LI+     G  E+       +C    + +    FK       RP+V+TYG L+
Sbjct: 587 NIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALL 646

Query: 160 NGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEM 219
           +GFC++  +  A +L   M     E       N   Y  +ID LCK G +D+A+E+  EM
Sbjct: 647 DGFCKSHRVEEARKLLDAMSMEGCE------PNQIVYDALIDGLCKVGKLDEAQEVKTEM 700

Query: 220 KGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKI 279
              G    +   ++LI  +      +  + +  +ML+    PN++ +  MID LCK GK 
Sbjct: 701 SEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKT 760

Query: 280 NEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNIL 339
           +EA  L+++M ++G  P+  TY +++DG+ ++G+I+T  E+   M SKG     V+Y +L
Sbjct: 761 DEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVL 820

Query: 340 INGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNV 399
           I+  CK   ++ A +L  ++           Y  ++ G  +         L DE+   + 
Sbjct: 821 IDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFIESLG--LLDEIGQDDT 878

Query: 400 EPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGI----EIFNCLIDGLCKAGRLD 455
            P LS Y +LID L K   ++ A++L    E+  F   +      +N LI+ LC A +++
Sbjct: 879 APFLSVYRLLIDNLIKAQRLEMALRLLE--EVATFSATLVDYSSTYNSLIESLCLANKVE 936

Query: 456 NAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKA---NDFLLYME 500
            A++LF ++ +KG++P + ++  +I GL R  K+ +A    DF+ +ME
Sbjct: 937 TAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLLDFISHME 984



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 132/499 (26%), Positives = 207/499 (41%), Gaps = 70/499 (14%)

Query: 146 FGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCK 205
           F  RP   TY  LI  F +   L  A  +H++M   +       + + F+      SLCK
Sbjct: 229 FRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANL------RMDGFTLRCFAYSLCK 282

Query: 206 EGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLT 265
            G   K +E    ++     P  V  T LI G C A  +EE       M      PN++T
Sbjct: 283 VG---KWREALTLVETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVT 339

Query: 266 FNVMIDCLCKGGK-INEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSM 324
           ++ ++ C C   K +     +L +M+  G  P    +NSL+  YC  G    A ++   M
Sbjct: 340 YSTLL-CGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKM 398

Query: 325 HSKGCKHTVVSYNILINGYCK-------------------------ILN----------- 348
              G     V YNILI   C                          +LN           
Sbjct: 399 VKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCL 458

Query: 349 -----VEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDL 403
                 E+A S+ R++I  G      TY+ +L+ L  A +   A  LF+EMK   +  D+
Sbjct: 459 CSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADV 518

Query: 404 STYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHK 463
            TY I++D  CK   +++A K F+ +        +  +  LI    KA ++  A ELF  
Sbjct: 519 YTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFET 578

Query: 464 LPQKGLVPTVVTYSIMIHGLCRKGKLEKA-------------NDFLLYMEK---NGCAPN 507
           +  +G +P +VTYS +I G C+ G++EKA              D  +Y ++   N   PN
Sbjct: 579 MLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPN 638

Query: 508 VVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAV 567
           VVT+  L+ GF ++++  +  +LL  M+       P+   +  ++D L K  K  E   V
Sbjct: 639 VVTYGALLDGFCKSHRVEEARKLLDAMS--MEGCEPNQIVYDALIDGLCKVGKLDEAQEV 696

Query: 568 SKSSYRACLYVTIFQPSSL 586
                      T++  SSL
Sbjct: 697 KTEMSEHGFPATLYTYSSL 715



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 85/374 (22%), Positives = 139/374 (37%), Gaps = 81/374 (21%)

Query: 256 DLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRID 315
           D   RP+  T+N +I    K  +++ A+ +   M    L  D FT        C VG+  
Sbjct: 228 DFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKW- 286

Query: 316 TAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLL 375
             RE    + ++      V Y  LI+G C+    EEAM    ++ +      V+TY+TLL
Sbjct: 287 --REALTLVETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLL 344

Query: 376 SGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFE 435
            G     Q G  +++ + M +    P    +N L+   C +     A KL   +      
Sbjct: 345 CGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHM 404

Query: 436 FGIEIFNCLIDG-----------------------------------------LCKAGRL 454
            G  ++N LI                                           LC AG+ 
Sbjct: 405 PGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKY 464

Query: 455 DNAWELFHKLPQKGLVP-----------------------------------TVVTYSIM 479
           + A+ +  ++  +G +P                                    V TY+IM
Sbjct: 465 EKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIM 524

Query: 480 IHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPER 539
           +   C+ G +E+A  +   M + GC PNVVT+  L+H +L+  K S   EL   M     
Sbjct: 525 VDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETML--SE 582

Query: 540 NLVPDDTTFSIVVD 553
             +P+  T+S ++D
Sbjct: 583 GCLPNIVTYSALID 596



 Score = 82.0 bits (201), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 66/239 (27%), Positives = 107/239 (44%), Gaps = 9/239 (3%)

Query: 301 YNSLMDGYCLVGRIDTAR--EIFLSMHSKGCKHTVVSY-NILINGYCKILNVEEAMSLYR 357
           YN+L+D   L+ R D  +  E FL       K     + N+L+  +C+  +   A+    
Sbjct: 168 YNALVD---LIVRDDDEKVPEEFLQQIRDDDKEVFGEFLNVLVRKHCRNGSFSIALEELG 224

Query: 358 QIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNN 417
           ++     R +  TYN L+    +A +   A  +  EM L N+  D  T       LCK  
Sbjct: 225 RLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVG 284

Query: 418 CVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYS 477
             +EA+ L   +E   F      +  LI GLC+A   + A +  +++     +P VVTYS
Sbjct: 285 KWREALTL---VETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYS 341

Query: 478 IMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAE 536
            ++ G   K +L +    L  M   GC P+   FN+L+H +  +   S   +LL KM +
Sbjct: 342 TLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVK 400



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 75/303 (24%), Positives = 127/303 (41%), Gaps = 15/303 (4%)

Query: 266 FNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMH 325
            NV++   C+ G  + A   L  +      P R TYN L+  +    R+D+A  I   M 
Sbjct: 203 LNVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMS 262

Query: 326 SKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAG 385
               +    +        CK+    EA++L      N V  TV  Y  L+SGL +A    
Sbjct: 263 LANLRMDGFTLRCFAYSLCKVGKWREALTLVE--TENFVPDTVF-YTKLISGLCEASLFE 319

Query: 386 YAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLI 445
            A    + M+  +  P++ TY+ L+ G      +    ++ +M+ M       +IFN L+
Sbjct: 320 EAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLV 379

Query: 446 DGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKAN-DFLLYMEK--- 501
              C +G    A++L  K+ + G +P  V Y+I+I  +C  G  +  N D L   EK   
Sbjct: 380 HAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSIC--GDKDSLNCDLLDLAEKAYS 437

Query: 502 ----NGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAK 557
                G   N +  ++         K  K   ++ +M    +  +PD +T+S V++ L  
Sbjct: 438 EMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMI--GQGFIPDTSTYSKVLNYLCN 495

Query: 558 DEK 560
             K
Sbjct: 496 ASK 498


>gi|449511869|ref|XP_004164076.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Cucumis sativus]
          Length = 660

 Score =  234 bits (598), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 140/480 (29%), Positives = 241/480 (50%), Gaps = 19/480 (3%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
           P +  +N L  A+     +  +   Y  +   GL+P+  T NIL+       + LC  +R
Sbjct: 142 PTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILL-------KALCKNDR 194

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
           +  A  LF  M   G  PD +TY T+++  C+ G +  A  L  +            K +
Sbjct: 195 VDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAGRF-----------KPS 243

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
           +  Y+ +ID +CKEG ++ A +L  EM   G++P VV  + +I+  C +GN E    LF 
Sbjct: 244 VPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFA 303

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
           +M   G   N+ TF  +I      GK+ EA  L +LMIQ G  P+   YN+L+ G C  G
Sbjct: 304 QMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNG 363

Query: 313 RIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYN 372
            ++ A ++   M   GC   V +Y+ILI+G+ K  ++  A   + ++IS+G R  V+TY 
Sbjct: 364 SLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYT 423

Query: 373 TLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMN 432
            ++  L +      A  L ++M L    P+  T+N  I GLC N  V+ A+KL   ++ +
Sbjct: 424 CMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGRVEWAMKLLERMQGH 483

Query: 433 KFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKA 492
                I  +N L+D L +  + + A+ LF ++  + L P +VTY+ +++G  R G + +A
Sbjct: 484 GCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEA 543

Query: 493 NDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVV 552
                     G AP+ +T+NT++H + +  K     +L+ +++   +   PD  T++ ++
Sbjct: 544 LQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSS-MKEWHPDIITYTSLI 602



 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 126/406 (31%), Positives = 205/406 (50%), Gaps = 13/406 (3%)

Query: 158 LINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFL 217
           +ING+ R G+   AL++  ++  G++      K  +  Y+ ++D+L  E        L+ 
Sbjct: 115 IINGYKRVGSAEQALKMFYRI--GEFG----CKPTVRIYNHLLDALLSENKFQMINPLYT 168

Query: 218 EMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGG 277
            MK  G+ P V     L+   C     +  + LF+EM + G  P+ +T+  M+  LCK G
Sbjct: 169 NMKKDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAG 228

Query: 278 KINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYN 337
           KI++A  L          P    YN+L+DG C  GRI+ A ++   M   G    VVSY+
Sbjct: 229 KIDDAREL-----AGRFKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYS 283

Query: 338 ILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLY 397
            +IN  C   NVE A +L+ Q+   G    + T+  L+ G F  G+   A  L+  M   
Sbjct: 284 CIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQD 343

Query: 398 NVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNA 457
             EP++  YN LI GLC N  ++EA+++   ++ +     +  ++ LIDG  K+G L  A
Sbjct: 344 GCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGA 403

Query: 458 WELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHG 517
            E ++++   G  P VVTY+ M+  LC+    ++AN  +  M   GC PN +TFNT + G
Sbjct: 404 SETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKG 463

Query: 518 FLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
              N +    ++LL +M       +P+ TT++ ++D L +  KY E
Sbjct: 464 LCGNGRVEWAMKLLERMQG--HGCLPNITTYNELLDALFRMNKYEE 507



 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 119/399 (29%), Positives = 204/399 (51%), Gaps = 13/399 (3%)

Query: 188 ISKTNIF-----SYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAG 242
           I+ +N F     +Y ++I+ L +E  +D  + +  +MK  GIN    +   +I+G+   G
Sbjct: 64  IANSNAFQHTASTYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLFICIINGYKRVG 123

Query: 243 NWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYN 302
           + E+   +F  + + G +P +  +N ++D L    K    N L   M + GL P+ FTYN
Sbjct: 124 SAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYN 183

Query: 303 SLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISN 362
            L+   C   R+D A ++F+ M +KGC    V+Y  +++  CK   +++A  L     + 
Sbjct: 184 ILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDAREL-----AG 238

Query: 363 GVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEA 422
             + +V  YN L+ G+ + G+   A KL  EM    V+P++ +Y+ +I+ LC +  V+ A
Sbjct: 239 RFKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELA 298

Query: 423 VKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHG 482
             LF  + +   +  I  F  LI G    G+L  A +L+  + Q G  P VV Y+ +IHG
Sbjct: 299 FALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHG 358

Query: 483 LCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLV 542
           LC  G LE+A      M+++GC PNV T++ L+ GF ++       E  ++M        
Sbjct: 359 LCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMI--SHGCR 416

Query: 543 PDDTTFSIVVDLLAKDEKYHEC-SAVSKSSYRACLYVTI 580
           P+  T++ +VD+L K+  + +  S V K +   C   TI
Sbjct: 417 PNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTI 455



 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 103/385 (26%), Positives = 169/385 (43%), Gaps = 54/385 (14%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFN-LLFGAVAKNRHYDAVISFYRKLVSIGLL 107
           C SG  N+  A   F  M        I +F  L+ G   + + Y+A +  ++ ++  G  
Sbjct: 290 CVSG--NVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEA-LDLWKLMIQDGCE 346

Query: 108 PDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGN 167
           P+ +  N LI+       GLC    ++EA  +   M   G  P+V TY  LI+GF ++G+
Sbjct: 347 PNVVAYNTLIH-------GLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGD 399

Query: 168 LSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPA 227
           L  A     +M+S         + N+ +Y+ ++D LCK  + D+A  L  +M   G  P 
Sbjct: 400 LVGASETWNRMISHG------CRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPN 453

Query: 228 VVVCTTLIHGFCCAG-----------------------------------NWEEVNGLFI 252
            +   T I G C  G                                    +EE  GLF 
Sbjct: 454 TITFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQ 513

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
           E+     +PNL+T+N ++    + G + EA  L    + RG  PD  TYN+++  YC  G
Sbjct: 514 EIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQG 573

Query: 313 RIDTAREIFLSMHSKGCKHT-VVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
           ++  A ++   + S    H  +++Y  LI G C  +N+EEAM+   + I+ G+     T+
Sbjct: 574 KVKIAAQLVERVSSMKEWHPDIITYTSLIWGACNWMNIEEAMAFLDKAINQGICPNFATW 633

Query: 372 NTLLSGLFQA-GQAGYAQKLFDEMK 395
           N L+   F + G  G    L D ++
Sbjct: 634 NALVRCFFDSLGHMGPIHILDDILR 658


>gi|115482066|ref|NP_001064626.1| Os10g0421800 [Oryza sativa Japonica Group]
 gi|113639235|dbj|BAF26540.1| Os10g0421800, partial [Oryza sativa Japonica Group]
          Length = 973

 Score =  234 bits (598), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 142/491 (28%), Positives = 256/491 (52%), Gaps = 15/491 (3%)

Query: 77  SFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEA 136
           ++N L   + K+      +  YR ++  G++P   T ++L+  FG +         ++  
Sbjct: 197 TYNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKR-------RDVETV 249

Query: 137 TWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSY 196
            WL + M A GV+P+V +Y   I    +      A R+  KM +         K ++ ++
Sbjct: 250 LWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEG------CKPDVITH 303

Query: 197 SIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLD 256
           +++I  LC  G +  AK++F +MK     P  V   TL+  F   G+ + V  ++  M  
Sbjct: 304 TVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKA 363

Query: 257 LGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDT 316
            G   N++ +  +ID LC+ G++ EA  + + M Q+G+ P++++YNSL+ G+    R   
Sbjct: 364 DGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGD 423

Query: 317 AREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLS 376
           A E+F  M   G K    ++ + IN Y K     +A+  Y  + S G+   V+  N +L 
Sbjct: 424 ALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLF 483

Query: 377 GLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEF 436
           GL ++G+ G A+++F E+K   V PD  TY ++I    K +   EAVK+F+ +  N    
Sbjct: 484 GLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVP 543

Query: 437 GIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFL 496
            +   N LID L KAGR D AW +F++L +  L PT  TY+ ++ GL R+GK+++    L
Sbjct: 544 DVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLL 603

Query: 497 LYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLA 556
             M  +   PN++T+NT++    +N   +  +++L+ M    +  +PD ++++ V+  L 
Sbjct: 604 EEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMT--TKGCIPDLSSYNTVIYGLV 661

Query: 557 KDEKYHECSAV 567
           K+E+Y+E  ++
Sbjct: 662 KEERYNEAFSI 672



 Score =  202 bits (513), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 123/448 (27%), Positives = 226/448 (50%), Gaps = 14/448 (3%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
           P + S+ +    + + + +D       K+ + G  PD +T  +LI         LC   R
Sbjct: 263 PNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQV-------LCDAGR 315

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
           I +A  +F  M     +PD +TY TL++ F   G+    + +   M +  Y +      N
Sbjct: 316 ISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYND------N 369

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
           + +Y+ +ID+LC+ G V +A E+F EMK +GI P      +LI GF  A  + +   LF 
Sbjct: 370 VVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFK 429

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
            M   GP+PN  T  + I+   K G+  +A    ELM  +G+ PD    N+++ G    G
Sbjct: 430 HMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSG 489

Query: 313 RIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYN 372
           R+  A+ +F  + + G     ++Y ++I    K    +EA+ ++  +I N     V+  N
Sbjct: 490 RLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVN 549

Query: 373 TLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMN 432
           +L+  L++AG+   A ++F ++K  N+EP   TYN L+ GL +   V+E + L   +  +
Sbjct: 550 SLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHS 609

Query: 433 KFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKA 492
            +   +  +N ++D LCK G +++A ++ + +  KG +P + +Y+ +I+GL ++ +  +A
Sbjct: 610 NYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEA 669

Query: 493 NDFLLYMEKNGCAPNVVTFNTLMHGFLQ 520
                 M+K    P+  T  T++  F++
Sbjct: 670 FSIFCQMKKV-LIPDYATLCTILPSFVK 696



 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 146/543 (26%), Positives = 246/543 (45%), Gaps = 23/543 (4%)

Query: 12  SSETVSKVKLSSLFKSPRQIAAVSSPETQLNEFLHENCKSGIINLNEARYFFGYMTHMQP 71
           S E++  ++   L KS   +  V +     N  L    KSG   L  A+  F  +  M  
Sbjct: 453 SGESIKAIQRYELMKSKGIVPDVVAG----NAVLFGLAKSG--RLGMAKRVFHELKAMGV 506

Query: 72  SPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVEN 131
           SP   ++ ++    +K   +D  +  +  ++    +PD L +N LI+      RG     
Sbjct: 507 SPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRG----- 561

Query: 132 RIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKT 191
              EA  +F  +    + P   TY TL+ G  R G +   + L ++M   +Y        
Sbjct: 562 --DEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNY------PP 613

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
           N+ +Y+ I+D LCK G V+ A ++   M  +G  P +    T+I+G      + E   +F
Sbjct: 614 NLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIF 673

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLL-ELMIQRGLNPDRFTYNSLMDGYCL 310
            +M  +   P+  T   ++    K G + EA  ++ +  +Q G   DR + +SLM+G   
Sbjct: 674 CQMKKV-LIPDYATLCTILPSFVKIGLMKEALHIIKDYFLQPGSKTDRSSCHSLMEGILK 732

Query: 311 VGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVIT 370
              I+ + E    + S G          LI   CK     EA  L ++  S GV      
Sbjct: 733 KAGIEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGL 792

Query: 371 YNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLE 430
           YN+L+ GL        A+ LF EMK     PD  TYN+L+D + K+  ++E +K+   + 
Sbjct: 793 YNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMH 852

Query: 431 MNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLE 490
              +E     +N +I GL K+ RL+ A +L++ L  +G  PT  TY  ++ GL + G++E
Sbjct: 853 RKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIE 912

Query: 491 KANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSI 550
            A +    M + GC  N   +N L++G      T KV  L   M   ++ + PD  +++I
Sbjct: 913 DAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMV--DQGINPDIKSYTI 970

Query: 551 VVD 553
           ++D
Sbjct: 971 IID 973



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 121/481 (25%), Positives = 220/481 (45%), Gaps = 49/481 (10%)

Query: 132 RIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLS---VALRLHKKMVSGDYENGLI 188
           R+ +   +F  M    V+ +V T+  +  G    G L    VAL + K       E G++
Sbjct: 140 RVGDMAEVFDVMQRQIVKANVGTFAAIFGGLGVEGGLRSAPVALPVMK-------EAGIV 192

Query: 189 SKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVN 248
              N ++Y+ ++  L K G   +A E++  M   G+ P+V   + L+  F    + E V 
Sbjct: 193 --LNAYTYNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDVETVL 250

Query: 249 GLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGY 308
            L  EM   G +PN+ ++ + I  L +  + +EA  +L  M   G  PD  T+  L+   
Sbjct: 251 WLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVL 310

Query: 309 CLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTV 368
           C  GRI  A+++F  M     K   V+Y  L++ +    + +  M ++  + ++G    V
Sbjct: 311 CDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNV 370

Query: 369 ITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLF-- 426
           + Y  ++  L Q G+   A ++FDEMK   + P+  +YN LI G  K +   +A++LF  
Sbjct: 371 VAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKH 430

Query: 427 ------------HMLEMN-------------KFEF--------GIEIFNCLIDGLCKAGR 453
                       H+L +N             ++E          +   N ++ GL K+GR
Sbjct: 431 MDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGR 490

Query: 454 LDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNT 513
           L  A  +FH+L   G+ P  +TY++MI    +  K ++A      M +N C P+V+  N+
Sbjct: 491 LGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNS 550

Query: 514 LMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKSSYR 573
           L+    +  +  +   + +++   E NL P D T++ ++  L ++ K  E   + +  Y 
Sbjct: 551 LIDTLYKAGRGDEAWRIFYQLK--EMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYH 608

Query: 574 A 574
           +
Sbjct: 609 S 609



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 92/371 (24%), Positives = 170/371 (45%), Gaps = 9/371 (2%)

Query: 207 GLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTF 266
           G V    E+F  M+ + +   V     +  G    G           M + G   N  T+
Sbjct: 139 GRVGDMAEVFDVMQRQIVKANVGTFAAIFGGLGVEGGLRSAPVALPVMKEAGIVLNAYTY 198

Query: 267 NVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHS 326
           N ++  L K G   EA  +  +M+  G+ P   TY+ LM  +     ++T   +   M +
Sbjct: 199 NGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEA 258

Query: 327 KGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGY 386
            G K  V SY I I    +    +EA  +  ++ + G +  VIT+  L+  L  AG+   
Sbjct: 259 HGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVLCDAGRISD 318

Query: 387 AQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLID 446
           A+ +F +MK  + +PD  TY  L+D    N   Q  +++++ ++ + +   +  +  +ID
Sbjct: 319 AKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVID 378

Query: 447 GLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAP 506
            LC+ GR+  A E+F ++ QKG+VP   +Y+ +I G  +  +   A +   +M+ +G  P
Sbjct: 379 ALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKP 438

Query: 507 NVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEK------ 560
           N  T    ++ + ++ ++ K ++    M    + +VPD    + V+  LAK  +      
Sbjct: 439 NGYTHVLFINYYGKSGESIKAIQRYELMK--SKGIVPDVVAGNAVLFGLAKSGRLGMAKR 496

Query: 561 -YHECSAVSKS 570
            +HE  A+  S
Sbjct: 497 VFHELKAMGVS 507


>gi|115469638|ref|NP_001058418.1| Os06g0690900 [Oryza sativa Japonica Group]
 gi|52076717|dbj|BAD45630.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|53793285|dbj|BAD54507.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|113596458|dbj|BAF20332.1| Os06g0690900 [Oryza sativa Japonica Group]
          Length = 991

 Score =  234 bits (598), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 149/483 (30%), Positives = 239/483 (49%), Gaps = 20/483 (4%)

Query: 36  SPETQLNEFLHEN-CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAV 94
           SP  +   FL    CKSG   + +AR  F  M      P + ++N +    +K    +  
Sbjct: 285 SPNVRAFTFLISGLCKSG--RVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDA 342

Query: 95  ISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVIT 154
           +     +   G  PD  T N LI        GLC + + +EA  L  N +  G  P V+T
Sbjct: 343 LKIKELMEKNGCHPDDWTYNTLI-------YGLC-DQKTEEAEELLNNAVKEGFTPTVVT 394

Query: 155 YGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKE 214
           +  LING+C       ALR+  KM+S         K ++  +  +I+SL K+  + +AKE
Sbjct: 395 FTNLINGYCMAEKFDDALRMKNKMMSSK------CKLDLQVFGKLINSLIKKDRLKEAKE 448

Query: 215 LFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLC 274
           L  E+   G+ P V+  T++I G+C +G  +    +   M   G +PN  T+N ++  L 
Sbjct: 449 LLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLV 508

Query: 275 KGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVV 334
           K  K+++A  LL  M + G+ P+  TY +L+ G C     D A  +F  M   G K    
Sbjct: 509 KDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEH 568

Query: 335 SYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEM 394
           +Y +L +  CK    EEA S    I+  GV  T + Y TL+ G  +AG   +A  L + M
Sbjct: 569 AYAVLTDALCKAGRAEEAYSF---IVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERM 625

Query: 395 KLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRL 454
                 PD  TY++L+  LCK   + EA+ +   + +   +  I  +  LID + + G+ 
Sbjct: 626 IDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKH 685

Query: 455 DNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTL 514
           D+A  +++++   G  P+  TY++ I+  C++G+LE A D +L ME+ G AP+VVT+N L
Sbjct: 686 DHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNIL 745

Query: 515 MHG 517
           + G
Sbjct: 746 IDG 748



 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 153/521 (29%), Positives = 252/521 (48%), Gaps = 54/521 (10%)

Query: 78  FNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEAT 137
           +N    ++A+    + +   Y +LV  GLLPD +T N +I  +       C E  +  A 
Sbjct: 151 YNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTMIKSY-------CKEGDLTTAH 203

Query: 138 WLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYS 197
             F+ ++  G+ P+  T   L+ G+CRTG L  A  L   M        +  + N +SY+
Sbjct: 204 RYFRLLLEGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPL------MGCQRNEYSYT 257

Query: 198 IIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDL 257
           I+I  LC    V KA  LFL MK  G +P V   T LI G C +G   +   LF  M   
Sbjct: 258 ILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQN 317

Query: 258 GPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTA 317
           G  P+++T+N MI    K G++N+A  + ELM + G +PD +TYN+L+ G C   + + A
Sbjct: 318 GVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLC-DQKTEEA 376

Query: 318 REIFLSMHSKGCKHTVVSYNILINGYC----------------------------KILN- 348
            E+  +   +G   TVV++  LINGYC                            K++N 
Sbjct: 377 EELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINS 436

Query: 349 ------VEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPD 402
                 ++EA  L  +I +NG+   VITY +++ G  ++G+   A ++   M+    +P+
Sbjct: 437 LIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPN 496

Query: 403 LSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFH 462
             TYN L+ GL K+  + +A+ L   ++ +     +  +  L+ G C     DNA+ LF 
Sbjct: 497 AWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFE 556

Query: 463 KLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNN 522
            + Q GL P    Y+++   LC+ G+ E+A  F++   + G A   V + TL+ GF +  
Sbjct: 557 MMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIV---RKGVALTKVYYTTLIDGFSKAG 613

Query: 523 KTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
            T     L+ +M   +    PD  T+S+++  L K ++ +E
Sbjct: 614 NTDFAATLIERMI--DEGCTPDSYTYSVLLHALCKQKRLNE 652



 Score =  205 bits (522), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 145/528 (27%), Positives = 246/528 (46%), Gaps = 22/528 (4%)

Query: 37  PET-QLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVI 95
           PET   N  +   C++G   L +A + F  M  M       S+ +L   +   +     +
Sbjct: 216 PETFTCNALVLGYCRTG--ELRKACWLFLMMPLMGCQRNEYSYTILIQGLCDAKCVRKAL 273

Query: 96  SFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITY 155
             +  +   G  P+      LI+       GLC   R+ +A  LF  M   GV P V+TY
Sbjct: 274 VLFLMMKRDGCSPNVRAFTFLIS-------GLCKSGRVGDARLLFDAMPQNGVVPSVMTY 326

Query: 156 GTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKEL 215
             +I G+ + G ++ AL++ + M     +NG     + ++Y+ +I  LC +   ++A+EL
Sbjct: 327 NAMIVGYSKLGRMNDALKIKELM----EKNG--CHPDDWTYNTLIYGLCDQK-TEEAEEL 379

Query: 216 FLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCK 275
                  G  P VV  T LI+G+C A  +++   +  +M+    + +L  F  +I+ L K
Sbjct: 380 LNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIK 439

Query: 276 GGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVS 335
             ++ EA  LL  +   GL P+  TY S++DGYC  G++D A E+   M   GC+    +
Sbjct: 440 KDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWT 499

Query: 336 YNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMK 395
           YN L+ G  K   + +AM+L  ++  +G+   VITY TLL G         A +LF+ M+
Sbjct: 500 YNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMME 559

Query: 396 LYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLD 455
              ++PD   Y +L D LCK    +EA   +  +           +  LIDG  KAG  D
Sbjct: 560 QNGLKPDEHAYAVLTDALCKAGRAEEA---YSFIVRKGVALTKVYYTTLIDGFSKAGNTD 616

Query: 456 NAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLM 515
            A  L  ++  +G  P   TYS+++H LC++ +L +A   L  M   G    +  +  L+
Sbjct: 617 FAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILI 676

Query: 516 HGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
              L+  K      + ++M        P  TT+++ ++   K+ +  +
Sbjct: 677 DEMLREGKHDHAKRMYNEMTSSGHK--PSATTYTVFINSYCKEGRLED 722



 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 149/522 (28%), Positives = 242/522 (46%), Gaps = 40/522 (7%)

Query: 55  NLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLN 114
            L EA+     ++     P + ++  +     K+   D  +   + +   G  P+  T N
Sbjct: 442 RLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYN 501

Query: 115 ILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRL 174
            L+        GL  + ++ +A  L   M   G+ P+VITY TL+ G C   +   A RL
Sbjct: 502 SLM-------YGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRL 554

Query: 175 HKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTL 234
            + M     +NGL  K +  +Y+++ D+LCK G   +A+E +  +  +G+    V  TTL
Sbjct: 555 FEMM----EQNGL--KPDEHAYAVLTDALCKAG---RAEEAYSFIVRKGVALTKVYYTTL 605

Query: 235 IHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGL 294
           I GF  AGN +    L   M+D G  P+  T++V++  LCK  ++NEA  +L+ M  RG+
Sbjct: 606 IDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGI 665

Query: 295 NPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMS 354
               F Y  L+D     G+ D A+ ++  M S G K +  +Y + IN YCK   +E+A  
Sbjct: 666 KCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAED 725

Query: 355 LYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLY---NVEPDLSTYNILID 411
           L  ++   GV   V+TYN L+ G    G  GY  + F  +K     + EP+  TY +L+ 
Sbjct: 726 LILKMEREGVAPDVVTYNILIDG---CGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLK 782

Query: 412 GLCKNNCVQ----EAVKLFHMLEMN------------KFEFGIEIFNCLIDGLCKAGRLD 455
            L K N       +   +++++E++                 +  ++ LI G CKAGRL+
Sbjct: 783 HLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLE 842

Query: 456 NAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLM 515
            A  L   +  KGL P    Y+++I   C     EKA  F+  M + G  P + ++  L+
Sbjct: 843 EACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLV 902

Query: 516 HGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAK 557
            G        KV  L   + E   N   D+  + I+ D L K
Sbjct: 903 VGLCNEGDFEKVKSLFCDLLELGYN--HDEVAWKILNDGLLK 942



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 120/491 (24%), Positives = 216/491 (43%), Gaps = 35/491 (7%)

Query: 40  QLNEFLHENCKSGIINLNEARYFFGYMTHMQPS---PPISSFNLLFGAVAKNRHYDAVIS 96
           Q N + + +   G++   +       +T MQ     P + ++  L         +D    
Sbjct: 494 QPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFR 553

Query: 97  FYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYG 156
            +  +   GL PD     +L +        LC   R +EA   +  ++  GV    + Y 
Sbjct: 554 LFEMMEQNGLKPDEHAYAVLTD-------ALCKAGRAEEA---YSFIVRKGVALTKVYYT 603

Query: 157 TLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELF 216
           TLI+GF + GN   A  L ++M+    + G    +  ++YS+++ +LCK+  +++A  + 
Sbjct: 604 TLIDGFSKAGNTDFAATLIERMI----DEGCTPDS--YTYSVLLHALCKQKRLNEALPIL 657

Query: 217 LEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKG 276
            +M  RGI   +   T LI      G  +    ++ EM   G +P+  T+ V I+  CK 
Sbjct: 658 DQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKE 717

Query: 277 GKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSY 336
           G++ +A  L+  M + G+ PD  TYN L+DG   +G ID A      M    C+    +Y
Sbjct: 718 GRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTY 777

Query: 337 NILI----------------NGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQ 380
            +L+                +G   ++ ++    L  +++ +G+  TV TY++L++G  +
Sbjct: 778 CLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCK 837

Query: 381 AGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEI 440
           AG+   A  L D M    + P+   Y +LI   C     ++A+    ++    F+  +E 
Sbjct: 838 AGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLES 897

Query: 441 FNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYME 500
           +  L+ GLC  G  +    LF  L + G     V + I+  GL + G ++     L  ME
Sbjct: 898 YRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILNDGLLKAGYVDICFQMLSIME 957

Query: 501 KNGCAPNVVTF 511
           K  C  +  T+
Sbjct: 958 KRYCCISSQTY 968



 Score = 85.1 bits (209), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 82/359 (22%), Positives = 139/359 (38%), Gaps = 55/359 (15%)

Query: 29  RQIAAVSSPET-QLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAK 87
           R I    +P++   +  LH  CK     LNEA      M+       I ++ +L   + +
Sbjct: 624 RMIDEGCTPDSYTYSVLLHALCKQK--RLNEALPILDQMSLRGIKCTIFAYTILIDEMLR 681

Query: 88  NRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFG 147
              +D     Y ++ S G  P   T  + IN +       C E R+++A  L   M   G
Sbjct: 682 EGKHDHAKRMYNEMTSSGHKPSATTYTVFINSY-------CKEGRLEDAEDLILKMEREG 734

Query: 148 VRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYE----------------------- 184
           V PDV+TY  LI+G    G +  A    K+MV    E                       
Sbjct: 735 VAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRS 794

Query: 185 ---NGLIS-------------------KTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGR 222
              +G+ +                      + +YS +I   CK G +++A  L   M G+
Sbjct: 795 VDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGK 854

Query: 223 GINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEA 282
           G++P   + T LI   C    +E+       M + G +P L ++ +++  LC  G   + 
Sbjct: 855 GLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKV 914

Query: 283 NGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILIN 341
             L   +++ G N D   +  L DG    G +D   ++   M  + C  +  +Y ++ N
Sbjct: 915 KSLFCDLLELGYNHDEVAWKILNDGLLKAGYVDICFQMLSIMEKRYCCISSQTYALVTN 973


>gi|125556563|gb|EAZ02169.1| hypothetical protein OsI_24261 [Oryza sativa Indica Group]
          Length = 991

 Score =  234 bits (598), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 149/483 (30%), Positives = 239/483 (49%), Gaps = 20/483 (4%)

Query: 36  SPETQLNEFLHEN-CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAV 94
           SP  +   FL    CKSG   + +AR  F  M      P + ++N +    +K    +  
Sbjct: 285 SPNVRAFTFLISGLCKSG--RVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDA 342

Query: 95  ISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVIT 154
           +     +   G  PD  T N LI        GLC + + +EA  L  N +  G  P V+T
Sbjct: 343 LKIKELMEKNGCHPDDWTYNTLI-------YGLC-DQKTEEAEELLNNAVKEGFTPTVVT 394

Query: 155 YGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKE 214
           +  LING+C       ALR+  KM+S         K ++  +  +I+SL K+  + +AKE
Sbjct: 395 FTNLINGYCMAEKFDDALRMKNKMMSSK------CKLDLQVFGKLINSLIKKDRLKEAKE 448

Query: 215 LFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLC 274
           L  E+   G+ P V+  T++I G+C +G  +    +   M   G +PN  T+N ++  L 
Sbjct: 449 LLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLV 508

Query: 275 KGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVV 334
           K  K+++A  LL  M + G+ P+  TY +L+ G C     D A  +F  M   G K    
Sbjct: 509 KDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEH 568

Query: 335 SYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEM 394
           +Y +L +  CK    EEA S    I+  GV  T + Y TL+ G  +AG   +A  L + M
Sbjct: 569 AYAVLTDALCKAGRAEEAYSF---IVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERM 625

Query: 395 KLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRL 454
                 PD  TY++L+  LCK   + EA+ +   + +   +  I  +  LID + + G+ 
Sbjct: 626 IDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKH 685

Query: 455 DNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTL 514
           D+A  +++++   G  P+  TY++ I+  C++G+LE A D +L ME+ G AP+VVT+N L
Sbjct: 686 DHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNIL 745

Query: 515 MHG 517
           + G
Sbjct: 746 IDG 748



 Score =  218 bits (554), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 152/521 (29%), Positives = 253/521 (48%), Gaps = 54/521 (10%)

Query: 78  FNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEAT 137
           +N    ++A+    + +   Y +LV  GLLPD +T N +I  +       C E  +  A 
Sbjct: 151 YNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTMIKSY-------CKEGDLTTAH 203

Query: 138 WLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYS 197
             F+ ++  G+ P+  T   L+ G+CRTG L  A  L   M        +  + N +SY+
Sbjct: 204 RCFRLLLEGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPL------MGCQRNEYSYT 257

Query: 198 IIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDL 257
           I+I  LC+   V +A  LFL MK  G +P V   T LI G C +G   +   LF  M   
Sbjct: 258 ILIQGLCEAKCVREALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQN 317

Query: 258 GPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTA 317
           G  P+++T+N MI    K G++N+A  + ELM + G +PD +TYN+L+ G C   + + A
Sbjct: 318 GVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLC-DQKTEEA 376

Query: 318 REIFLSMHSKGCKHTVVSYNILINGYC----------------------------KILN- 348
            E+  +   +G   TVV++  LINGYC                            K++N 
Sbjct: 377 EELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINS 436

Query: 349 ------VEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPD 402
                 ++EA  L  +I +NG+   VITY +++ G  ++G+   A ++   M+    +P+
Sbjct: 437 LIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPN 496

Query: 403 LSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFH 462
             TYN L+ GL K+  + +A+ L   ++ +     +  +  L+ G C     DNA+ LF 
Sbjct: 497 AWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFE 556

Query: 463 KLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNN 522
            + Q GL P    Y+++   LC+ G+ E+A  F++   + G A   V + TL+ GF +  
Sbjct: 557 MMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIV---RKGVALTKVYYTTLIDGFSKAG 613

Query: 523 KTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
            T     L+ +M   +    PD  T+S+++  L K ++ +E
Sbjct: 614 NTDFAATLIERMI--DEGCTPDSYTYSVLLHALCKQKRLNE 652



 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 145/528 (27%), Positives = 247/528 (46%), Gaps = 22/528 (4%)

Query: 37  PET-QLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVI 95
           PET   N  +   C++G   L +A + F  M  M       S+ +L   + + +     +
Sbjct: 216 PETFTCNALVLGYCRTG--ELRKACWLFLMMPLMGCQRNEYSYTILIQGLCEAKCVREAL 273

Query: 96  SFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITY 155
             +  +   G  P+      LI+       GLC   R+ +A  LF  M   GV P V+TY
Sbjct: 274 VLFLMMKRDGCSPNVRAFTFLIS-------GLCKSGRVGDARLLFDAMPQNGVVPSVMTY 326

Query: 156 GTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKEL 215
             +I G+ + G ++ AL++ + M     +NG     + ++Y+ +I  LC +   ++A+EL
Sbjct: 327 NAMIVGYSKLGRMNDALKIKELM----EKNG--CHPDDWTYNTLIYGLCDQK-TEEAEEL 379

Query: 216 FLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCK 275
                  G  P VV  T LI+G+C A  +++   +  +M+    + +L  F  +I+ L K
Sbjct: 380 LNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIK 439

Query: 276 GGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVS 335
             ++ EA  LL  +   GL P+  TY S++DGYC  G++D A E+   M   GC+    +
Sbjct: 440 KDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWT 499

Query: 336 YNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMK 395
           YN L+ G  K   + +AM+L  ++  +G+   VITY TLL G         A +LF+ M+
Sbjct: 500 YNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMME 559

Query: 396 LYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLD 455
              ++PD   Y +L D LCK    +EA   +  +           +  LIDG  KAG  D
Sbjct: 560 QNGLKPDEHAYAVLTDALCKAGRAEEA---YSFIVRKGVALTKVYYTTLIDGFSKAGNTD 616

Query: 456 NAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLM 515
            A  L  ++  +G  P   TYS+++H LC++ +L +A   L  M   G    +  +  L+
Sbjct: 617 FAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILI 676

Query: 516 HGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
              L+  K      + ++M        P  TT+++ ++   K+ +  +
Sbjct: 677 DEMLREGKHDHAKRMYNEMTSSGHK--PSATTYTVFINSYCKEGRLED 722



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 149/522 (28%), Positives = 242/522 (46%), Gaps = 40/522 (7%)

Query: 55  NLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLN 114
            L EA+     ++     P + ++  +     K+   D  +   + +   G  P+  T N
Sbjct: 442 RLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYN 501

Query: 115 ILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRL 174
            L+        GL  + ++ +A  L   M   G+ P+VITY TL+ G C   +   A RL
Sbjct: 502 SLM-------YGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRL 554

Query: 175 HKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTL 234
            + M     +NGL  K +  +Y+++ D+LCK G   +A+E +  +  +G+    V  TTL
Sbjct: 555 FEMM----EQNGL--KPDEHAYAVLTDALCKAG---RAEEAYSFIVRKGVALTKVYYTTL 605

Query: 235 IHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGL 294
           I GF  AGN +    L   M+D G  P+  T++V++  LCK  ++NEA  +L+ M  RG+
Sbjct: 606 IDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGI 665

Query: 295 NPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMS 354
               F Y  L+D     G+ D A+ ++  M S G K +  +Y + IN YCK   +E+A  
Sbjct: 666 KCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAED 725

Query: 355 LYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLY---NVEPDLSTYNILID 411
           L  ++   GV   V+TYN L+ G    G  GY  + F  +K     + EP+  TY +L+ 
Sbjct: 726 LILKMEREGVAPDVVTYNILIDG---CGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLK 782

Query: 412 GLCKNNCVQ----EAVKLFHMLEMN------------KFEFGIEIFNCLIDGLCKAGRLD 455
            L K N       +   +++++E++                 +  ++ LI G CKAGRL+
Sbjct: 783 HLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLE 842

Query: 456 NAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLM 515
            A  L   +  KGL P    Y+++I   C     EKA  F+  M + G  P + ++  L+
Sbjct: 843 EACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLV 902

Query: 516 HGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAK 557
            G        KV  L   + E   N   D+  + I+ D L K
Sbjct: 903 VGLCNEGDFEKVKSLFCDLLELGYN--HDEVAWKILNDGLLK 942



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 120/491 (24%), Positives = 216/491 (43%), Gaps = 35/491 (7%)

Query: 40  QLNEFLHENCKSGIINLNEARYFFGYMTHMQPS---PPISSFNLLFGAVAKNRHYDAVIS 96
           Q N + + +   G++   +       +T MQ     P + ++  L         +D    
Sbjct: 494 QPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFR 553

Query: 97  FYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYG 156
            +  +   GL PD     +L +        LC   R +EA   +  ++  GV    + Y 
Sbjct: 554 LFEMMEQNGLKPDEHAYAVLTD-------ALCKAGRAEEA---YSFIVRKGVALTKVYYT 603

Query: 157 TLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELF 216
           TLI+GF + GN   A  L ++M+    + G    +  ++YS+++ +LCK+  +++A  + 
Sbjct: 604 TLIDGFSKAGNTDFAATLIERMI----DEGCTPDS--YTYSVLLHALCKQKRLNEALPIL 657

Query: 217 LEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKG 276
            +M  RGI   +   T LI      G  +    ++ EM   G +P+  T+ V I+  CK 
Sbjct: 658 DQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKE 717

Query: 277 GKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSY 336
           G++ +A  L+  M + G+ PD  TYN L+DG   +G ID A      M    C+    +Y
Sbjct: 718 GRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTY 777

Query: 337 NILI----------------NGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQ 380
            +L+                +G   ++ ++    L  +++ +G+  TV TY++L++G  +
Sbjct: 778 CLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCK 837

Query: 381 AGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEI 440
           AG+   A  L D M    + P+   Y +LI   C     ++A+    ++    F+  +E 
Sbjct: 838 AGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLES 897

Query: 441 FNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYME 500
           +  L+ GLC  G  +    LF  L + G     V + I+  GL + G ++     L  ME
Sbjct: 898 YRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILNDGLLKAGYVDICFQMLSIME 957

Query: 501 KNGCAPNVVTF 511
           K  C  +  T+
Sbjct: 958 KRYCCISSQTY 968



 Score = 85.5 bits (210), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 79/343 (23%), Positives = 132/343 (38%), Gaps = 54/343 (15%)

Query: 44  FLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVS 103
            LH  CK     LNEA      M+       I ++ +L   + +   +D     Y ++ S
Sbjct: 640 LLHALCKQK--RLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTS 697

Query: 104 IGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFC 163
            G  P   T  + IN +       C E R+++A  L   M   GV PDV+TY  LI+G  
Sbjct: 698 SGHKPSATTYTVFINSY-------CKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCG 750

Query: 164 RTGNLSVALRLHKKMVSGDYE--------------------------NGLIS-------- 189
             G +  A    K+MV    E                          +G+ +        
Sbjct: 751 HMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITW 810

Query: 190 -----------KTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGF 238
                         + +YS +I   CK G +++A  L   M G+G++P   + T LI   
Sbjct: 811 QLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCC 870

Query: 239 CCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDR 298
           C    +E+       M + G +P L ++ +++  LC  G   +   L   +++ G N D 
Sbjct: 871 CDTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDE 930

Query: 299 FTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILIN 341
             +  L DG    G +D   ++   M  + C  +  +Y ++ N
Sbjct: 931 VAWKILNDGLLKAGYVDICFQMLSIMEKRYCCISSQTYALVTN 973


>gi|78708657|gb|ABB47632.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 1080

 Score =  234 bits (598), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 142/491 (28%), Positives = 256/491 (52%), Gaps = 15/491 (3%)

Query: 77  SFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEA 136
           ++N L   + K+      +  YR ++  G++P   T ++L+  FG +         ++  
Sbjct: 162 TYNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRD-------VETV 214

Query: 137 TWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSY 196
            WL + M A GV+P+V +Y   I    +      A R+  KM +         K ++ ++
Sbjct: 215 LWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEG------CKPDVITH 268

Query: 197 SIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLD 256
           +++I  LC  G +  AK++F +MK     P  V   TL+  F   G+ + V  ++  M  
Sbjct: 269 TVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKA 328

Query: 257 LGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDT 316
            G   N++ +  +ID LC+ G++ EA  + + M Q+G+ P++++YNSL+ G+    R   
Sbjct: 329 DGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGD 388

Query: 317 AREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLS 376
           A E+F  M   G K    ++ + IN Y K     +A+  Y  + S G+   V+  N +L 
Sbjct: 389 ALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLF 448

Query: 377 GLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEF 436
           GL ++G+ G A+++F E+K   V PD  TY ++I    K +   EAVK+F+ +  N    
Sbjct: 449 GLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVP 508

Query: 437 GIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFL 496
            +   N LID L KAGR D AW +F++L +  L PT  TY+ ++ GL R+GK+++    L
Sbjct: 509 DVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLL 568

Query: 497 LYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLA 556
             M  +   PN++T+NT++    +N   +  +++L+ M    +  +PD ++++ V+  L 
Sbjct: 569 EEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMT--TKGCIPDLSSYNTVIYGLV 626

Query: 557 KDEKYHECSAV 567
           K+E+Y+E  ++
Sbjct: 627 KEERYNEAFSI 637



 Score =  202 bits (513), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 123/448 (27%), Positives = 226/448 (50%), Gaps = 14/448 (3%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
           P + S+ +    + + + +D       K+ + G  PD +T  +LI         LC   R
Sbjct: 228 PNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQV-------LCDAGR 280

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
           I +A  +F  M     +PD +TY TL++ F   G+    + +   M +  Y +      N
Sbjct: 281 ISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYND------N 334

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
           + +Y+ +ID+LC+ G V +A E+F EMK +GI P      +LI GF  A  + +   LF 
Sbjct: 335 VVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFK 394

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
            M   GP+PN  T  + I+   K G+  +A    ELM  +G+ PD    N+++ G    G
Sbjct: 395 HMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSG 454

Query: 313 RIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYN 372
           R+  A+ +F  + + G     ++Y ++I    K    +EA+ ++  +I N     V+  N
Sbjct: 455 RLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVN 514

Query: 373 TLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMN 432
           +L+  L++AG+   A ++F ++K  N+EP   TYN L+ GL +   V+E + L   +  +
Sbjct: 515 SLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHS 574

Query: 433 KFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKA 492
            +   +  +N ++D LCK G +++A ++ + +  KG +P + +Y+ +I+GL ++ +  +A
Sbjct: 575 NYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEA 634

Query: 493 NDFLLYMEKNGCAPNVVTFNTLMHGFLQ 520
                 M+K    P+  T  T++  F++
Sbjct: 635 FSIFCQMKKV-LIPDYATLCTILPSFVK 661



 Score =  195 bits (495), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 148/547 (27%), Positives = 248/547 (45%), Gaps = 23/547 (4%)

Query: 12  SSETVSKVKLSSLFKSPRQIAAVSSPETQLNEFLHENCKSGIINLNEARYFFGYMTHMQP 71
           S E++  ++   L KS   +  V +     N  L    KSG   L  A+  F  +  M  
Sbjct: 418 SGESIKAIQRYELMKSKGIVPDVVAG----NAVLFGLAKSG--RLGMAKRVFHELKAMGV 471

Query: 72  SPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVEN 131
           SP   ++ ++    +K   +D  +  +  ++    +PD L +N LI+      RG     
Sbjct: 472 SPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRG----- 526

Query: 132 RIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKT 191
              EA  +F  +    + P   TY TL+ G  R G +   + L ++M   +Y        
Sbjct: 527 --DEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNY------PP 578

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
           N+ +Y+ I+D LCK G V+ A ++   M  +G  P +    T+I+G      + E   +F
Sbjct: 579 NLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIF 638

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLL-ELMIQRGLNPDRFTYNSLMDGYCL 310
            +M  +   P+  T   ++    K G + EA  ++ +  +Q G   DR + +SLM+G   
Sbjct: 639 CQMKKV-LIPDYATLCTILPSFVKIGLMKEALHIIKDYFLQPGSKTDRSSCHSLMEGILK 697

Query: 311 VGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVIT 370
              I+ + E    + S G          LI   CK     EA  L ++  S GV      
Sbjct: 698 KAGIEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGL 757

Query: 371 YNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLE 430
           YN+L+ GL        A+ LF EMK     PD  TYN+L+D + K+  ++E +K+   + 
Sbjct: 758 YNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMH 817

Query: 431 MNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLE 490
              +E     +N +I GL K+ RL+ A +L++ L  +G  PT  TY  ++ GL + G++E
Sbjct: 818 RKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIE 877

Query: 491 KANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSI 550
            A +    M + GC  N   +N L++G      T KV  L   M   ++ + PD  +++I
Sbjct: 878 DAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMV--DQGINPDIKSYTI 935

Query: 551 VVDLLAK 557
           ++D L K
Sbjct: 936 IIDTLCK 942



 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 134/487 (27%), Positives = 239/487 (49%), Gaps = 17/487 (3%)

Query: 49   CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
            CK+G +N  +A      MT     P +SS+N +   + K   Y+   S + ++  + L+P
Sbjct: 591  CKNGAVN--DALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQMKKV-LIP 647

Query: 109  DFLTLNILINCFGNKERGLCVENRIKEATWLFKN-MIAFGVRPDVITYGTLINGFCRTGN 167
            D+ TL  ++  F   + GL     +KEA  + K+  +  G + D  +  +L+ G  +   
Sbjct: 648  DYATLCTILPSF--VKIGL-----MKEALHIIKDYFLQPGSKTDRSSCHSLMEGILKKAG 700

Query: 168  LSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPA 227
            +  ++   + + S    +G+    + F    +I  LCK+    +A EL  + K  G++  
Sbjct: 701  IEKSIEFAEIIAS----SGIT--LDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLK 754

Query: 228  VVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLE 287
              +  +LI G       +   GLF EM +LG  P+  T+N+++D + K  +I E   + E
Sbjct: 755  TGLYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQE 814

Query: 288  LMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKIL 347
             M ++G      TYN+++ G     R++ A +++ ++ S+G   T  +Y  L++G  K  
Sbjct: 815  EMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAG 874

Query: 348  NVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYN 407
             +E+A +L+ +++  G +     YN LL+G   AG       LF +M    + PD+ +Y 
Sbjct: 875  RIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYT 934

Query: 408  ILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQK 467
            I+ID LCK   + + +  F  L     E  +  +N LIDGL K+ RL+ A  LF+++ +K
Sbjct: 935  IIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKK 994

Query: 468  GLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKV 527
            G+VP + TY+ +I  L + GK  +A      +   G  PNV T+N L+ G+  +  T   
Sbjct: 995  GIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRGYSVSGSTDSA 1054

Query: 528  VELLHKM 534
                 +M
Sbjct: 1055 YAAYGRM 1061



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 121/481 (25%), Positives = 220/481 (45%), Gaps = 49/481 (10%)

Query: 132 RIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLS---VALRLHKKMVSGDYENGLI 188
           R+ +   +F  M    V+ +V T+  +  G    G L    VAL + K       E G++
Sbjct: 105 RVGDMAEVFDVMQRQIVKANVGTFAAIFGGLGVEGGLRSAPVALPVMK-------EAGIV 157

Query: 189 SKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVN 248
              N ++Y+ ++  L K G   +A E++  M   G+ P+V   + L+  F    + E V 
Sbjct: 158 --LNAYTYNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDVETVL 215

Query: 249 GLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGY 308
            L  EM   G +PN+ ++ + I  L +  + +EA  +L  M   G  PD  T+  L+   
Sbjct: 216 WLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVL 275

Query: 309 CLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTV 368
           C  GRI  A+++F  M     K   V+Y  L++ +    + +  M ++  + ++G    V
Sbjct: 276 CDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNV 335

Query: 369 ITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLF-- 426
           + Y  ++  L Q G+   A ++FDEMK   + P+  +YN LI G  K +   +A++LF  
Sbjct: 336 VAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKH 395

Query: 427 ------------HMLEMN-------------KFEF--------GIEIFNCLIDGLCKAGR 453
                       H+L +N             ++E          +   N ++ GL K+GR
Sbjct: 396 MDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGR 455

Query: 454 LDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNT 513
           L  A  +FH+L   G+ P  +TY++MI    +  K ++A      M +N C P+V+  N+
Sbjct: 456 LGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNS 515

Query: 514 LMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKSSYR 573
           L+    +  +  +   + +++   E NL P D T++ ++  L ++ K  E   + +  Y 
Sbjct: 516 LIDTLYKAGRGDEAWRIFYQLK--EMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYH 573

Query: 574 A 574
           +
Sbjct: 574 S 574



 Score =  128 bits (321), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 85/265 (32%), Positives = 128/265 (48%), Gaps = 13/265 (4%)

Query: 77   SFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEA 136
            ++N +   + K+R  +  I  Y  L+S G  P   T   L++       GL    RI++A
Sbjct: 827  TYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLD-------GLLKAGRIEDA 879

Query: 137  TWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSY 196
              LF  M+ +G + +   Y  L+NG    GN      L + MV    + G+    +I SY
Sbjct: 880  ENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMV----DQGI--NPDIKSY 933

Query: 197  SIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLD 256
            +IIID+LCK G ++     F ++   G+ P ++    LI G   +   EE   LF EM  
Sbjct: 934  TIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQK 993

Query: 257  LGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDT 316
             G  PNL T+N +I  L K GK  EA  + E ++ +G  P+ FTYN+L+ GY + G  D+
Sbjct: 994  KGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRGYSVSGSTDS 1053

Query: 317  AREIFLSMHSKGCKHTVVSYNILIN 341
            A   +  M   GC     +Y  L N
Sbjct: 1054 AYAAYGRMIVGGCLPNSSTYMQLPN 1078



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 92/371 (24%), Positives = 170/371 (45%), Gaps = 9/371 (2%)

Query: 207 GLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTF 266
           G V    E+F  M+ + +   V     +  G    G           M + G   N  T+
Sbjct: 104 GRVGDMAEVFDVMQRQIVKANVGTFAAIFGGLGVEGGLRSAPVALPVMKEAGIVLNAYTY 163

Query: 267 NVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHS 326
           N ++  L K G   EA  +  +M+  G+ P   TY+ LM  +     ++T   +   M +
Sbjct: 164 NGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEA 223

Query: 327 KGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGY 386
            G K  V SY I I    +    +EA  +  ++ + G +  VIT+  L+  L  AG+   
Sbjct: 224 HGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVLCDAGRISD 283

Query: 387 AQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLID 446
           A+ +F +MK  + +PD  TY  L+D    N   Q  +++++ ++ + +   +  +  +ID
Sbjct: 284 AKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVID 343

Query: 447 GLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAP 506
            LC+ GR+  A E+F ++ QKG+VP   +Y+ +I G  +  +   A +   +M+ +G  P
Sbjct: 344 ALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKP 403

Query: 507 NVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEK------ 560
           N  T    ++ + ++ ++ K ++    M    + +VPD    + V+  LAK  +      
Sbjct: 404 NGYTHVLFINYYGKSGESIKAIQRYELMK--SKGIVPDVVAGNAVLFGLAKSGRLGMAKR 461

Query: 561 -YHECSAVSKS 570
            +HE  A+  S
Sbjct: 462 VFHELKAMGVS 472


>gi|357113916|ref|XP_003558747.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g01110-like [Brachypodium distachyon]
          Length = 651

 Score =  234 bits (598), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 142/472 (30%), Positives = 241/472 (51%), Gaps = 15/472 (3%)

Query: 98  YRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGT 157
           YR ++S     +  TLNI+++ +       C   +  E   +   M    V PDV+T+  
Sbjct: 147 YRLVLSSNSEVNTYTLNIMVHSY-------CKTLQFGEVDTVISEMEKRCVFPDVVTHNV 199

Query: 158 LINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFL 217
           +++   R G++  A+ L   MVS   + GL++      Y+ ++  L + G  DKA+E+F 
Sbjct: 200 MVDARFRAGDVEAAMALIDSMVSKGIKPGLVT------YNSVLKGLLRNGRWDKAREVFR 253

Query: 218 EMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGG 277
            M   G+ P V     LI GFC AG  EE    + EM      P++++F+ +I    + G
Sbjct: 254 AMDACGVAPDVRSFNMLIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRG 313

Query: 278 KINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYN 337
           +++ A   L  M + GL PD   Y  ++ G+C  G +  A  +   M + GC   VV+YN
Sbjct: 314 EMDHAAEYLREMREFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYN 373

Query: 338 ILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLY 397
            L+NG CK   + +A  L  ++   GV   + T+ TL+ G  + G    A + FD +   
Sbjct: 374 TLLNGLCKERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQ 433

Query: 398 NVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNA 457
            + PD+ TYN LIDG+C+   + +A +L+  +   +       ++ LID  C+ G++DNA
Sbjct: 434 RLRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNA 493

Query: 458 WELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHG 517
           +    ++  KG+VP ++TY+ +I G CR G + K   FL  M  +   P+++T+NTL+HG
Sbjct: 494 FAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPDLITYNTLIHG 553

Query: 518 FLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSK 569
           +++  K  +   LL K+ E E N+ PD  T+++++   +      E   V K
Sbjct: 554 YVKEGKMHEAFNLL-KIMENE-NVQPDAVTYNMIISGFSVHGNMQEADWVYK 603



 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 145/505 (28%), Positives = 254/505 (50%), Gaps = 17/505 (3%)

Query: 41  LNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRK 100
           LN  +H  CK+  +   E       M      P + + N++  A  +    +A ++    
Sbjct: 162 LNIMVHSYCKT--LQFGEVDTVISEMEKRCVFPDVVTHNVMVDARFRAGDVEAAMALIDS 219

Query: 101 LVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLIN 160
           +VS G+ P  +T N ++       +GL    R  +A  +F+ M A GV PDV ++  LI 
Sbjct: 220 MVSKGIKPGLVTYNSVL-------KGLLRNGRWDKAREVFRAMDACGVAPDVRSFNMLIG 272

Query: 161 GFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMK 220
           GFCR G L  ALR +K+M       G     ++ S+S +I    + G +D A E   EM+
Sbjct: 273 GFCRAGELEEALRFYKEM------RGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMR 326

Query: 221 GRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKIN 280
             G+ P  V+ T +I GFC AG   E   +  EM+  G  P+++T+N +++ LCK  +++
Sbjct: 327 EFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLS 386

Query: 281 EANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILI 340
           +A  LL  M +RG+ PD  T+ +L+ GYC  G I+ A + F ++  +  +  +V+YN LI
Sbjct: 387 DAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLI 446

Query: 341 NGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVE 400
           +G C+  ++ +A  L+  + S  +    +TY+ L+    + GQ   A    DEM    + 
Sbjct: 447 DGMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVNKGIV 506

Query: 401 PDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWEL 460
           P++ TYN +I G C++  V +  +    +  +K    +  +N LI G  K G++  A+ L
Sbjct: 507 PNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPDLITYNTLIHGYVKEGKMHEAFNL 566

Query: 461 FHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQ 520
              +  + + P  VTY+++I G    G +++A+     M   G  P+  T+ ++++G + 
Sbjct: 567 LKIMENENVQPDAVTYNMIISGFSVHGNMQEADWVYKKMGARGIEPDRYTYMSMINGHVV 626

Query: 521 NNKTSKVVELLHKMAEPERNLVPDD 545
              + K  +L  +M   ++ L PDD
Sbjct: 627 AGNSKKSFQLHDEML--QKGLAPDD 649



 Score =  231 bits (589), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 140/482 (29%), Positives = 240/482 (49%), Gaps = 30/482 (6%)

Query: 3   SRTQFRCLFSSETVSKVKLSSLFKSPRQIAAVSSPETQLNEFLHENCKSGIINLN----- 57
           S  + RC+F       V + + F++    AA++     ++  + +  K G++  N     
Sbjct: 183 SEMEKRCVFPDVVTHNVMVDARFRAGDVEAAMA----LIDSMVSKGIKPGLVTYNSVLKG 238

Query: 58  --------EARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPD 109
                   +AR  F  M     +P + SFN+L G   +    +  + FY+++    + PD
Sbjct: 239 LLRNGRWDKAREVFRAMDACGVAPDVRSFNMLIGGFCRAGELEEALRFYKEMRGRRVTPD 298

Query: 110 FLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLS 169
            ++ + LI  F  +         +  A    + M  FG+ PD + Y  +I GFCR G + 
Sbjct: 299 VVSFSCLIGLFTRR-------GEMDHAAEYLREMREFGLMPDGVIYTMVIGGFCRAGLML 351

Query: 170 VALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVV 229
            ALR+  +MV+           ++ +Y+ +++ LCKE  +  A+EL  EMK RG+ P + 
Sbjct: 352 EALRVRDEMVA------FGCLPDVVTYNTLLNGLCKERRLSDAEELLNEMKERGVPPDLC 405

Query: 230 VCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELM 289
             TTLIHG+C  GN E+    F  + D   RP+++T+N +ID +C+ G + +AN L + M
Sbjct: 406 TFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLIDGMCRQGDLGKANELWDDM 465

Query: 290 IQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNV 349
             R + P+  TY+ L+D +C  G++D A      M +KG    +++YN +I GYC+  NV
Sbjct: 466 HSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNV 525

Query: 350 EEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNIL 409
            +      ++  + V   +ITYNTL+ G  + G+   A  L   M+  NV+PD  TYN++
Sbjct: 526 SKGQQFLPKMRHDKVMPDLITYNTLIHGYVKEGKMHEAFNLLKIMENENVQPDAVTYNMI 585

Query: 410 IDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGL 469
           I G   +  +QEA  ++  +     E     +  +I+G   AG    +++L  ++ QKGL
Sbjct: 586 ISGFSVHGNMQEADWVYKKMGARGIEPDRYTYMSMINGHVVAGNSKKSFQLHDEMLQKGL 645

Query: 470 VP 471
            P
Sbjct: 646 AP 647



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 125/472 (26%), Positives = 235/472 (49%), Gaps = 15/472 (3%)

Query: 77  SFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEA 136
           + N++  +  K   +  V +   ++    + PD +T N++++    + R   VE     A
Sbjct: 161 TLNIMVHSYCKTLQFGEVDTVISEMEKRCVFPDVVTHNVMVDA---RFRAGDVE----AA 213

Query: 137 TWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSY 196
             L  +M++ G++P ++TY +++ G  R G    A  + + M      +      ++ S+
Sbjct: 214 MALIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAM------DACGVAPDVRSF 267

Query: 197 SIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLD 256
           +++I   C+ G +++A   + EM+GR + P VV  + LI  F   G  +       EM +
Sbjct: 268 NMLIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMRE 327

Query: 257 LGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDT 316
            G  P+ + + ++I   C+ G + EA  + + M+  G  PD  TYN+L++G C   R+  
Sbjct: 328 FGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSD 387

Query: 317 AREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLS 376
           A E+   M  +G    + ++  LI+GYC+  N+E+A+  +  I    +R  ++TYNTL+ 
Sbjct: 388 AEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLID 447

Query: 377 GLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEF 436
           G+ + G  G A +L+D+M    + P+  TY+ILID  C+   V  A      +       
Sbjct: 448 GMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVNKGIVP 507

Query: 437 GIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFL 496
            I  +N +I G C++G +    +   K+    ++P ++TY+ +IHG  ++GK+ +A + L
Sbjct: 508 NIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPDLITYNTLIHGYVKEGKMHEAFNLL 567

Query: 497 LYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTF 548
             ME     P+ VT+N ++ GF  +    +   +  KM    R + PD  T+
Sbjct: 568 KIMENENVQPDAVTYNMIISGFSVHGNMQEADWVYKKMG--ARGIEPDRYTY 617



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 88/340 (25%), Positives = 160/340 (47%), Gaps = 37/340 (10%)

Query: 254 MLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGR 313
           +L   P P    F+++I    +  K  EA     L++   +       N+L+      G 
Sbjct: 80  LLASSPTPQPQVFDLLIRTYTQSRKPREAFEAFRLLLDHRVPIPAAASNALLAALSRAGW 139

Query: 314 IDTAREIFLSMHSKGCKHTVVSYNILINGYCKIL-------------------------- 347
                + +  + S   +    + NI+++ YCK L                          
Sbjct: 140 PHLTADAYRLVLSSNSEVNTYTLNIMVHSYCKTLQFGEVDTVISEMEKRCVFPDVVTHNV 199

Query: 348 ---------NVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYN 398
                    +VE AM+L   ++S G++  ++TYN++L GL + G+   A+++F  M    
Sbjct: 200 MVDARFRAGDVEAAMALIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACG 259

Query: 399 VEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAW 458
           V PD+ ++N+LI G C+   ++EA++ +  +   +    +  F+CLI    + G +D+A 
Sbjct: 260 VAPDVRSFNMLIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAA 319

Query: 459 ELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGF 518
           E   ++ + GL+P  V Y+++I G CR G + +A      M   GC P+VVT+NTL++G 
Sbjct: 320 EYLREMREFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGL 379

Query: 519 LQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKD 558
            +  + S   ELL++M   ER + PD  TF+ ++    +D
Sbjct: 380 CKERRLSDAEELLNEMK--ERGVPPDLCTFTTLIHGYCRD 417


>gi|297721877|ref|NP_001173302.1| Os03g0201300 [Oryza sativa Japonica Group]
 gi|108706707|gb|ABF94502.1| salt-inducible protein, putative, expressed [Oryza sativa Japonica
           Group]
 gi|255674288|dbj|BAH92030.1| Os03g0201300 [Oryza sativa Japonica Group]
          Length = 796

 Score =  234 bits (597), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 140/495 (28%), Positives = 242/495 (48%), Gaps = 14/495 (2%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
           N  +H +C  G   L +A      M     SP   ++N L  A  +        +   ++
Sbjct: 212 NLLVHTHCSKG--TLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARM 269

Query: 102 VSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLING 161
              G+ P   T N L++ F            IK+AT + ++M A+G  PD+ TY  L  G
Sbjct: 270 KRDGIAPTQPTYNTLVSAFARL-------GWIKQATKVVESMTAYGFEPDLRTYNVLAVG 322

Query: 162 FCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKG 221
            C+ G +  A RL  +M     E    +  ++ +Y+ ++D+  K      A  L  EM+ 
Sbjct: 323 LCQAGKVDEAFRLKDEM-----ERLSTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRD 377

Query: 222 RGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINE 281
           +G+ P +V    ++   C  G  EE  G   ++ + G  P+++T+N +ID  CK G + +
Sbjct: 378 KGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAK 437

Query: 282 ANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILIN 341
           A  L++ M+ +GL  D FT N+++   C + R + A E+  S   +G     VSY  ++ 
Sbjct: 438 AFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMA 497

Query: 342 GYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEP 401
            Y K  N E A+ L+ Q+I   +  ++ TYNTL+ GL +  +   A    +E+    + P
Sbjct: 498 AYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNELVEKGLVP 557

Query: 402 DLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELF 461
           D +TYNI+I   CK   ++ A +  + +  N F+  +   N L++GLC  G+LD A +LF
Sbjct: 558 DETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLF 617

Query: 462 HKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQN 521
               +KG    V+TY+ +I  +C+ G ++ A  F   ME  G  P+  T+N ++    + 
Sbjct: 618 ESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEA 677

Query: 522 NKTSKVVELLHKMAE 536
            ++ +   +LHK+A+
Sbjct: 678 GRSEEAHNMLHKLAD 692



 Score =  198 bits (503), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 130/463 (28%), Positives = 223/463 (48%), Gaps = 16/463 (3%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
           N  L+ +C+ G+  L EAR     M     +P   ++N L  A A+             +
Sbjct: 247 NTLLNAHCRKGM--LGEARALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESM 304

Query: 102 VSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVR-PDVITYGTLIN 160
            + G  PD  T N+L         GLC   ++ EA  L   M       PDV+TY TL++
Sbjct: 305 TAYGFEPDLRTYNVLA-------VGLCQAGKVDEAFRLKDEMERLSTALPDVVTYNTLVD 357

Query: 161 GFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMK 220
              +    S ALRL ++M     + G+  K  + +++I++ SLCKEG +++A     ++ 
Sbjct: 358 ACFKWRCSSDALRLLEEM----RDKGV--KPTLVTHNIVVKSLCKEGKLEEALGKLEKIA 411

Query: 221 GRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKIN 280
             G+ P V+   TLI  +C AGN  +   L  EM+  G + +  T N ++  LCK  +  
Sbjct: 412 EEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYE 471

Query: 281 EANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILI 340
           +A  LL    QRG  PD  +Y ++M  Y      + A  ++  M  +    ++ +YN LI
Sbjct: 472 DAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLI 531

Query: 341 NGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVE 400
            G C++  ++EA+    +++  G+     TYN ++    + G    A +  ++M   + +
Sbjct: 532 KGLCRMERLKEAIDKLNELVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFK 591

Query: 401 PDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWEL 460
           PD+ T N L++GLC +  + +A+KLF        +  +  +N LI  +CK G +D A   
Sbjct: 592 PDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHF 651

Query: 461 FHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNG 503
           F  +  KGL P   TY++++  L   G+ E+A++ L  +  +G
Sbjct: 652 FDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAHNMLHKLADSG 694



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 127/464 (27%), Positives = 198/464 (42%), Gaps = 81/464 (17%)

Query: 147 GVRPDVITYGTLINGFCRTGNL--SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLC 204
           GVRP +     +++   R+ +     +L + + ++       L    N +++++++ + C
Sbjct: 166 GVRPSLQAANAVLSALSRSPSTLPQASLDVFRSLIE------LRLHPNHYTFNLLVHTHC 219

Query: 205 KEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLL 264
            +G +  A      M+G G++P  V   TL++  C  G   E   L   M   G  P   
Sbjct: 220 SKGTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDGIAPTQP 279

Query: 265 TFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDT-------- 316
           T+N ++    + G I +A  ++E M   G  PD  TYN L  G C  G++D         
Sbjct: 280 TYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAVGLCQAGKVDEAFRLKDEM 339

Query: 317 ----------------------------AREIFLSMHSKGCKHTVVSYNILINGYCKILN 348
                                       A  +   M  KG K T+V++NI++   CK   
Sbjct: 340 ERLSTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGK 399

Query: 349 VEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNI 408
           +EEA+    +I   G+   VITYNTL+    +AG    A  L DEM    ++ D  T N 
Sbjct: 400 LEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNT 459

Query: 409 LIDGLCKNNCVQEAVKLFH------------------------------------MLEMN 432
           ++  LCK    ++A +L H                                    M+E  
Sbjct: 460 VLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIE-R 518

Query: 433 KFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKA 492
           K    I  +N LI GLC+  RL  A +  ++L +KGLVP   TY+I+IH  C++G LE A
Sbjct: 519 KLIPSISTYNTLIKGLCRMERLKEAIDKLNELVEKGLVPDETTYNIIIHAYCKEGDLENA 578

Query: 493 NDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAE 536
             F   M +N   P+VVT NTLM+G   + K  K ++L     E
Sbjct: 579 FRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVE 622



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 96/336 (28%), Positives = 168/336 (50%), Gaps = 5/336 (1%)

Query: 220 KGRGINPAVVVCTTLIHGFCCAGNWEEVNGL--FIEMLDLGPRPNLLTFNVMIDCLCKGG 277
           + RG+ P++     ++     + +      L  F  +++L   PN  TFN+++   C  G
Sbjct: 163 RRRGVRPSLQAANAVLSALSRSPSTLPQASLDVFRSLIELRLHPNHYTFNLLVHTHCSKG 222

Query: 278 KINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYN 337
            + +A   L  M   GL+PD  TYN+L++ +C  G +  AR +   M   G   T  +YN
Sbjct: 223 TLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDGIAPTQPTYN 282

Query: 338 ILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEM-KL 396
            L++ + ++  +++A  +   + + G    + TYN L  GL QAG+   A +L DEM +L
Sbjct: 283 TLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAVGLCQAGKVDEAFRLKDEMERL 342

Query: 397 YNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDN 456
               PD+ TYN L+D   K  C  +A++L   +     +  +   N ++  LCK G+L+ 
Sbjct: 343 STALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEE 402

Query: 457 AWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMH 516
           A     K+ ++GL P V+TY+ +I   C+ G + KA   +  M   G   +  T NT+++
Sbjct: 403 ALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLY 462

Query: 517 GFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVV 552
              +  +     ELLH  + P+R  VPD+ ++  V+
Sbjct: 463 NLCKMKRYEDAEELLH--SPPQRGFVPDEVSYGTVM 496



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 94/333 (28%), Positives = 169/333 (50%), Gaps = 5/333 (1%)

Query: 234 LIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRG 293
           L+H  C  G   +       M   G  P+ +T+N +++  C+ G + EA  LL  M + G
Sbjct: 214 LVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDG 273

Query: 294 LNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAM 353
           + P + TYN+L+  +  +G I  A ++  SM + G +  + +YN+L  G C+   V+EA 
Sbjct: 274 IAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAVGLCQAGKVDEAF 333

Query: 354 SLYRQI--ISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILID 411
            L  ++  +S  +   V+TYNTL+   F+   +  A +L +EM+   V+P L T+NI++ 
Sbjct: 334 RLKDEMERLSTAL-PDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVK 392

Query: 412 GLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVP 471
            LCK   ++EA+     +        +  +N LID  CKAG +  A+ L  ++  KGL  
Sbjct: 393 SLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKM 452

Query: 472 TVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELL 531
              T + +++ LC+  + E A + L    + G  P+ V++ T+M  + +       + L 
Sbjct: 453 DTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLW 512

Query: 532 HKMAEPERNLVPDDTTFSIVVDLLAKDEKYHEC 564
            +M   ER L+P  +T++ ++  L + E+  E 
Sbjct: 513 DQMI--ERKLIPSISTYNTLIKGLCRMERLKEA 543



 Score =  152 bits (383), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 96/312 (30%), Positives = 164/312 (52%), Gaps = 9/312 (2%)

Query: 258 GPRPNLLTFNVMIDCLCKG-GKINEAN-GLLELMIQRGLNPDRFTYNSLMDGYCLVGRID 315
           G RP+L   N ++  L +    + +A+  +   +I+  L+P+ +T+N L+  +C  G + 
Sbjct: 166 GVRPSLQAANAVLSALSRSPSTLPQASLDVFRSLIELRLHPNHYTFNLLVHTHCSKGTLA 225

Query: 316 TAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLL 375
            A     +M   G     V+YN L+N +C+   + EA +L  ++  +G+  T  TYNTL+
Sbjct: 226 DALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDGIAPTQPTYNTLV 285

Query: 376 SGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFE 435
           S   + G    A K+ + M  Y  EPDL TYN+L  GLC+   V EA +L    EM +  
Sbjct: 286 SAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAVGLCQAGKVDEAFRLKD--EMERLS 343

Query: 436 FGIE---IFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKA 492
             +     +N L+D   K     +A  L  ++  KG+ PT+VT++I++  LC++GKLE+A
Sbjct: 344 TALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEA 403

Query: 493 NDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVV 552
              L  + + G AP+V+T+NTL+  + +    +K   L+ +M    + L  D  T + V+
Sbjct: 404 LGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMV--GKGLKMDTFTLNTVL 461

Query: 553 DLLAKDEKYHEC 564
             L K ++Y + 
Sbjct: 462 YNLCKMKRYEDA 473



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 106/408 (25%), Positives = 182/408 (44%), Gaps = 51/408 (12%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CK G   L EA      +     +P + ++N L  A  K  +     +   ++V  GL  
Sbjct: 395 CKEG--KLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKM 452

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           D  TLN ++         LC   R ++A  L  +    G  PD ++YGT++  + +  N 
Sbjct: 453 DTFTLNTVL-------YNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNP 505

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
             ALRL  +M+    E  LI   +I +Y+ +I  LC+   + +A +   E+  +G+ P  
Sbjct: 506 EPALRLWDQMI----ERKLIP--SISTYNTLIKGLCRMERLKEAIDKLNELVEKGLVPDE 559

Query: 229 VVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLEL 288
                +IH +C  G+ E       +M++   +P+++T N +++ LC  GK+++A  L E 
Sbjct: 560 TTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFES 619

Query: 289 MIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILN 348
            +++G   D  TYN+L+   C VG +DTA   F  M  KG +    +YN++++   +   
Sbjct: 620 WVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGR 679

Query: 349 VEEAMSLYRQIISNG--------------------VRQ----------------TVITYN 372
            EEA ++  ++  +G                    V++                 + TY 
Sbjct: 680 SEEAHNMLHKLADSGKLSQSFACPLLKPSSADEADVKEHEGKPEAESSEKAQDNALETYM 739

Query: 373 TLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQ 420
             L+GL   GQ   A+ + DEM    +  D STY  L++GL K    Q
Sbjct: 740 ERLNGLCTGGQLKEAKAVLDEMMQKGMPVDSSTYITLMEGLIKRQKRQ 787


>gi|356551209|ref|XP_003543970.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Glycine max]
          Length = 687

 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 152/485 (31%), Positives = 251/485 (51%), Gaps = 15/485 (3%)

Query: 80  LLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWL 139
           LL+  V K+     ++ FY K+VS GLLPD    N ++    ++      +N I  A  +
Sbjct: 137 LLWIYVKKSLLEKCLLVFY-KMVSKGLLPDVKNCNRVLRLLRDR------DNNIDVAREV 189

Query: 140 FKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSII 199
           +  M+  G+ P V+TY T+++ FC+ G +  AL+L  +M        +    N  +Y+++
Sbjct: 190 YNVMVECGICPTVVTYNTMLDSFCKKGMVQEALQLLFQM------QAMGCSPNDVTYNVL 243

Query: 200 IDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGP 259
           ++ L   G +++AKEL  +M   G+  +V     LI G+C  G  EE + L  EML  G 
Sbjct: 244 VNGLSHSGEMEQAKELIQDMLRLGLEVSVYTYDPLIRGYCEKGQIEEASRLGEEMLSRGA 303

Query: 260 RPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTARE 319
            P ++T+N ++  LCK G++++A  LL++M+ + L PD  +YN+L+ GY  +G I  A  
Sbjct: 304 VPTVVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFL 363

Query: 320 IFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLF 379
           +F  +  +    +VV+YN LI+G C++ +++ AM L  ++I +G    V T+ T + G  
Sbjct: 364 LFAELRYRSLAPSVVTYNTLIDGLCRLGDLDVAMRLKDEMIKHGPDPDVFTFTTFVRGFC 423

Query: 380 QAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIE 439
           + G    A++LFDEM    ++PD   Y   I G  K     +A  +   +    F   + 
Sbjct: 424 KMGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLI 483

Query: 440 IFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYM 499
            +N  IDGL K G L  A EL  K+   GLVP  VTY+ +IH     G L KA    L M
Sbjct: 484 TYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARALFLEM 543

Query: 500 EKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDE 559
              G  P+VVT+  L+H +    +    + +LH     E+ + P+  T++ +++ L K  
Sbjct: 544 LSKGIFPSVVTYTVLIHSYAVRGRLK--LAILHFFEMHEKGVHPNVITYNALINGLCKVR 601

Query: 560 KYHEC 564
           K  + 
Sbjct: 602 KMDQA 606



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 146/501 (29%), Positives = 246/501 (49%), Gaps = 23/501 (4%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
           N  L   CK G++   EA      M  M  SP   ++N+L   ++ +   +      + +
Sbjct: 206 NTMLDSFCKKGMVQ--EALQLLFQMQAMGCSPNDVTYNVLVNGLSHSGEMEQAKELIQDM 263

Query: 102 VSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLING 161
           + +GL     T + LI       RG C + +I+EA+ L + M++ G  P V+TY T++ G
Sbjct: 264 LRLGLEVSVYTYDPLI-------RGYCEKGQIEEASRLGEEMLSRGAVPTVVTYNTIMYG 316

Query: 162 FCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKG 221
            C+ G +S A +L   MV+ +    L+S      Y+ +I    + G + +A  LF E++ 
Sbjct: 317 LCKWGRVSDARKLLDVMVNKNLMPDLVS------YNTLIYGYTRLGNIGEAFLLFAELRY 370

Query: 222 RGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINE 281
           R + P+VV   TLI G C  G+ +    L  EM+  GP P++ TF   +   CK G +  
Sbjct: 371 RSLAPSVVTYNTLIDGLCRLGDLDVAMRLKDEMIKHGPDPDVFTFTTFVRGFCKMGNLPM 430

Query: 282 ANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILIN 341
           A  L + M+ RGL PDRF Y + + G   +G    A  +   M ++G    +++YN+ I+
Sbjct: 431 AKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFID 490

Query: 342 GYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEP 401
           G  K+ N++EA  L ++++ NG+    +TY +++     AG    A+ LF EM    + P
Sbjct: 491 GLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARALFLEMLSKGIFP 550

Query: 402 DLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIE----IFNCLIDGLCKAGRLDNA 457
            + TY +LI        ++ A+   H  EM+  E G+      +N LI+GLCK  ++D A
Sbjct: 551 SVVTYTVLIHSYAVRGRLKLAI--LHFFEMH--EKGVHPNVITYNALINGLCKVRKMDQA 606

Query: 458 WELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHG 517
           +  F ++  KG+ P   TY+I+I+  C  G  ++A      M      P+  T  +L+  
Sbjct: 607 YNFFAEMQAKGISPNKYTYTILINENCNLGHWQEALRLYKDMLDREIQPDSCTHRSLLKH 666

Query: 518 FLQNNKTSKVVELLHKMAEPE 538
             ++ K   V  L + +A  E
Sbjct: 667 LNKDYKLHVVRHLENVIAAGE 687



 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 137/433 (31%), Positives = 220/433 (50%), Gaps = 12/433 (2%)

Query: 147 GVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLI-----SKTNIFSYSIIID 201
           G +   I+Y  +++   R G +  A  + +K+VS   ENG+I     S+ ++ S  +I+D
Sbjct: 76  GFKRSEISYSVILDILARNGLMRSAYCVMEKVVSVKMENGVIDVVSSSEVSMPSVKLILD 135

Query: 202 SL----CKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEV-NGLFIEMLD 256
            L     K+ L++K   +F +M  +G+ P V  C  ++       N  +V   ++  M++
Sbjct: 136 LLLWIYVKKSLLEKCLLVFYKMVSKGLLPDVKNCNRVLRLLRDRDNNIDVAREVYNVMVE 195

Query: 257 LGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDT 316
            G  P ++T+N M+D  CK G + EA  LL  M   G +P+  TYN L++G    G ++ 
Sbjct: 196 CGICPTVVTYNTMLDSFCKKGMVQEALQLLFQMQAMGCSPNDVTYNVLVNGLSHSGEMEQ 255

Query: 317 AREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLS 376
           A+E+   M   G + +V +Y+ LI GYC+   +EEA  L  +++S G   TV+TYNT++ 
Sbjct: 256 AKELIQDMLRLGLEVSVYTYDPLIRGYCEKGQIEEASRLGEEMLSRGAVPTVVTYNTIMY 315

Query: 377 GLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEF 436
           GL + G+   A+KL D M   N+ PDL +YN LI G  +   + EA  LF  L       
Sbjct: 316 GLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRYRSLAP 375

Query: 437 GIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFL 496
            +  +N LIDGLC+ G LD A  L  ++ + G  P V T++  + G C+ G L  A +  
Sbjct: 376 SVVTYNTLIDGLCRLGDLDVAMRLKDEMIKHGPDPDVFTFTTFVRGFCKMGNLPMAKELF 435

Query: 497 LYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLA 556
             M   G  P+   + T + G L+    SK   +  +M    R   PD  T+++ +D L 
Sbjct: 436 DEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEML--ARGFPPDLITYNVFIDGLH 493

Query: 557 KDEKYHECSAVSK 569
           K     E S + K
Sbjct: 494 KLGNLKEASELVK 506


>gi|222612845|gb|EEE50977.1| hypothetical protein OsJ_31558 [Oryza sativa Japonica Group]
          Length = 1263

 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 142/491 (28%), Positives = 256/491 (52%), Gaps = 15/491 (3%)

Query: 77  SFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEA 136
           ++N L   + K+      +  YR ++  G++P   T ++L+  FG +         ++  
Sbjct: 287 TYNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRD-------VETV 339

Query: 137 TWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSY 196
            WL + M A GV+P+V +Y   I    +      A R+  KM +         K ++ ++
Sbjct: 340 LWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEG------CKPDVITH 393

Query: 197 SIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLD 256
           +++I  LC  G +  AK++F +MK     P  V   TL+  F   G+ + V  ++  M  
Sbjct: 394 TVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKA 453

Query: 257 LGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDT 316
            G   N++ +  +ID LC+ G++ EA  + + M Q+G+ P++++YNSL+ G+    R   
Sbjct: 454 DGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGD 513

Query: 317 AREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLS 376
           A E+F  M   G K    ++ + IN Y K     +A+  Y  + S G+   V+  N +L 
Sbjct: 514 ALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLF 573

Query: 377 GLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEF 436
           GL ++G+ G A+++F E+K   V PD  TY ++I    K +   EAVK+F+ +  N    
Sbjct: 574 GLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVP 633

Query: 437 GIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFL 496
            +   N LID L KAGR D AW +F++L +  L PT  TY+ ++ GL R+GK+++    L
Sbjct: 634 DVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLL 693

Query: 497 LYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLA 556
             M  +   PN++T+NT++    +N   +  +++L+ M    +  +PD ++++ V+  L 
Sbjct: 694 EEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMT--TKGCIPDLSSYNTVIYGLV 751

Query: 557 KDEKYHECSAV 567
           K+E+Y+E  ++
Sbjct: 752 KEERYNEAFSI 762



 Score =  201 bits (512), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 127/460 (27%), Positives = 230/460 (50%), Gaps = 17/460 (3%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
           P + S+ +    + + + +D       K+ + G  PD +T  +LI         LC   R
Sbjct: 353 PNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQV-------LCDAGR 405

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
           I +A  +F  M     +PD +TY TL++ F   G+    + +   M +  Y +      N
Sbjct: 406 ISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYND------N 459

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
           + +Y+ +ID+LC+ G V +A E+F EMK +GI P      +LI GF  A  + +   LF 
Sbjct: 460 VVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFK 519

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
            M   GP+PN  T  + I+   K G+  +A    ELM  +G+ PD    N+++ G    G
Sbjct: 520 HMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSG 579

Query: 313 RIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYN 372
           R+  A+ +F  + + G     ++Y ++I    K    +EA+ ++  +I N     V+  N
Sbjct: 580 RLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVN 639

Query: 373 TLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMN 432
           +L+  L++AG+   A ++F ++K  N+EP   TYN L+ GL +   V+E + L   +  +
Sbjct: 640 SLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHS 699

Query: 433 KFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKA 492
            +   +  +N ++D LCK G +++A ++ + +  KG +P + +Y+ +I+GL ++ +  +A
Sbjct: 700 NYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEA 759

Query: 493 NDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLH 532
                 M+K    P+  T  T++  F+   K   + E LH
Sbjct: 760 FSIFCQMKKV-LIPDYATLCTILPSFV---KIGLMKEALH 795



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 148/547 (27%), Positives = 248/547 (45%), Gaps = 23/547 (4%)

Query: 12   SSETVSKVKLSSLFKSPRQIAAVSSPETQLNEFLHENCKSGIINLNEARYFFGYMTHMQP 71
            S E++  ++   L KS   +  V +     N  L    KSG   L  A+  F  +  M  
Sbjct: 543  SGESIKAIQRYELMKSKGIVPDVVAG----NAVLFGLAKSG--RLGMAKRVFHELKAMGV 596

Query: 72   SPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVEN 131
            SP   ++ ++    +K   +D  +  +  ++    +PD L +N LI+      RG     
Sbjct: 597  SPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRG----- 651

Query: 132  RIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKT 191
               EA  +F  +    + P   TY TL+ G  R G +   + L ++M   +Y        
Sbjct: 652  --DEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNY------PP 703

Query: 192  NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
            N+ +Y+ I+D LCK G V+ A ++   M  +G  P +    T+I+G      + E   +F
Sbjct: 704  NLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIF 763

Query: 252  IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLL-ELMIQRGLNPDRFTYNSLMDGYCL 310
             +M  +   P+  T   ++    K G + EA  ++ +  +Q G   DR + +SLM+G   
Sbjct: 764  CQMKKV-LIPDYATLCTILPSFVKIGLMKEALHIIKDYFLQPGSKTDRSSCHSLMEGILK 822

Query: 311  VGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVIT 370
               I+ + E    + S G          LI   CK     EA  L ++  S GV      
Sbjct: 823  KAGIEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGL 882

Query: 371  YNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLE 430
            YN+L+ GL        A+ LF EMK     PD  TYN+L+D + K+  ++E +K+   + 
Sbjct: 883  YNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMH 942

Query: 431  MNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLE 490
               +E     +N +I GL K+ RL+ A +L++ L  +G  PT  TY  ++ GL + G++E
Sbjct: 943  RKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIE 1002

Query: 491  KANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSI 550
             A +    M + GC  N   +N L++G      T KV  L   M   ++ + PD  +++I
Sbjct: 1003 DAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMV--DQGINPDIKSYTI 1060

Query: 551  VVDLLAK 557
            ++D L K
Sbjct: 1061 IIDTLCK 1067



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 134/487 (27%), Positives = 239/487 (49%), Gaps = 17/487 (3%)

Query: 49   CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
            CK+G +N  +A      MT     P +SS+N +   + K   Y+   S + ++  + L+P
Sbjct: 716  CKNGAVN--DALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQMKKV-LIP 772

Query: 109  DFLTLNILINCFGNKERGLCVENRIKEATWLFKN-MIAFGVRPDVITYGTLINGFCRTGN 167
            D+ TL  ++  F   + GL     +KEA  + K+  +  G + D  +  +L+ G  +   
Sbjct: 773  DYATLCTILPSF--VKIGL-----MKEALHIIKDYFLQPGSKTDRSSCHSLMEGILKKAG 825

Query: 168  LSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPA 227
            +  ++   + + S    +G+    + F    +I  LCK+    +A EL  + K  G++  
Sbjct: 826  IEKSIEFAEIIAS----SGIT--LDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLK 879

Query: 228  VVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLE 287
              +  +LI G       +   GLF EM +LG  P+  T+N+++D + K  +I E   + E
Sbjct: 880  TGLYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQE 939

Query: 288  LMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKIL 347
             M ++G      TYN+++ G     R++ A +++ ++ S+G   T  +Y  L++G  K  
Sbjct: 940  EMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAG 999

Query: 348  NVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYN 407
             +E+A +L+ +++  G +     YN LL+G   AG       LF +M    + PD+ +Y 
Sbjct: 1000 RIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYT 1059

Query: 408  ILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQK 467
            I+ID LCK   + + +  F  L     E  +  +N LIDGL K+ RL+ A  LF+++ +K
Sbjct: 1060 IIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKK 1119

Query: 468  GLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKV 527
            G+VP + TY+ +I  L + GK  +A      +   G  PNV T+N L+ G+  +  T   
Sbjct: 1120 GIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRGYSVSGSTDSA 1179

Query: 528  VELLHKM 534
                 +M
Sbjct: 1180 YAAYGRM 1186



 Score =  159 bits (401), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 120/470 (25%), Positives = 216/470 (45%), Gaps = 49/470 (10%)

Query: 132 RIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLS---VALRLHKKMVSGDYENGLI 188
           R+ +   +F  M    V+ +V T+  +  G    G L    VAL + K       E G++
Sbjct: 230 RVGDMAEVFDVMQRQIVKANVGTFAAIFGGLGVEGGLRSAPVALPVMK-------EAGIV 282

Query: 189 SKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVN 248
              N ++Y+ ++  L K G   +A E++  M   G+ P+V   + L+  F    + E V 
Sbjct: 283 --LNAYTYNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDVETVL 340

Query: 249 GLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGY 308
            L  EM   G +PN+ ++ + I  L +  + +EA  +L  M   G  PD  T+  L+   
Sbjct: 341 WLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVL 400

Query: 309 CLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTV 368
           C  GRI  A+++F  M     K   V+Y  L++ +    + +  M ++  + ++G    V
Sbjct: 401 CDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNV 460

Query: 369 ITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLF-- 426
           + Y  ++  L Q G+   A ++FDEMK   + P+  +YN LI G  K +   +A++LF  
Sbjct: 461 VAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKH 520

Query: 427 ------------HMLEMN-------------KFEF--------GIEIFNCLIDGLCKAGR 453
                       H+L +N             ++E          +   N ++ GL K+GR
Sbjct: 521 MDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGR 580

Query: 454 LDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNT 513
           L  A  +FH+L   G+ P  +TY++MI    +  K ++A      M +N C P+V+  N+
Sbjct: 581 LGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNS 640

Query: 514 LMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
           L+    +  +  +   + +++   E NL P D T++ ++  L ++ K  E
Sbjct: 641 LIDTLYKAGRGDEAWRIFYQLK--EMNLEPTDGTYNTLLAGLGREGKVKE 688



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 105/396 (26%), Positives = 186/396 (46%), Gaps = 13/396 (3%)

Query: 76   SSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKE 135
            SS + L   + K    +  I F   + S G+  D   L  LI       + LC + +  E
Sbjct: 811  SSCHSLMEGILKKAGIEKSIEFAEIIASSGITLDDFFLCPLI-------KHLCKQKKALE 863

Query: 136  ATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFS 195
            A  L K   +FGV      Y +LI G      + +A  L  +M        L    + F+
Sbjct: 864  AHELVKKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKE------LGCGPDEFT 917

Query: 196  YSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEML 255
            Y++++D++ K   +++  ++  EM  +G     V   T+I G   +   E+   L+  ++
Sbjct: 918  YNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLM 977

Query: 256  DLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRID 315
              G  P   T+  ++D L K G+I +A  L   M++ G   +   YN L++G+ + G  +
Sbjct: 978  SQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTE 1037

Query: 316  TAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLL 375
                +F  M  +G    + SY I+I+  CK   + + ++ +RQ++  G+   +ITYN L+
Sbjct: 1038 KVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLI 1097

Query: 376  SGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFE 435
             GL ++ +   A  LF+EM+   + P+L TYN LI  L K     EA K++  L    ++
Sbjct: 1098 DGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWK 1157

Query: 436  FGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVP 471
              +  +N LI G   +G  D+A+  + ++   G +P
Sbjct: 1158 PNVFTYNALIRGYSVSGSTDSAYAAYGRMIVGGCLP 1193



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 92/371 (24%), Positives = 170/371 (45%), Gaps = 9/371 (2%)

Query: 207 GLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTF 266
           G V    E+F  M+ + +   V     +  G    G           M + G   N  T+
Sbjct: 229 GRVGDMAEVFDVMQRQIVKANVGTFAAIFGGLGVEGGLRSAPVALPVMKEAGIVLNAYTY 288

Query: 267 NVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHS 326
           N ++  L K G   EA  +  +M+  G+ P   TY+ LM  +     ++T   +   M +
Sbjct: 289 NGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEA 348

Query: 327 KGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGY 386
            G K  V SY I I    +    +EA  +  ++ + G +  VIT+  L+  L  AG+   
Sbjct: 349 HGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVLCDAGRISD 408

Query: 387 AQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLID 446
           A+ +F +MK  + +PD  TY  L+D    N   Q  +++++ ++ + +   +  +  +ID
Sbjct: 409 AKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVID 468

Query: 447 GLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAP 506
            LC+ GR+  A E+F ++ QKG+VP   +Y+ +I G  +  +   A +   +M+ +G  P
Sbjct: 469 ALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKP 528

Query: 507 NVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEK------ 560
           N  T    ++ + ++ ++ K ++    M    + +VPD    + V+  LAK  +      
Sbjct: 529 NGYTHVLFINYYGKSGESIKAIQRYELMK--SKGIVPDVVAGNAVLFGLAKSGRLGMAKR 586

Query: 561 -YHECSAVSKS 570
            +HE  A+  S
Sbjct: 587 VFHELKAMGVS 597



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 84/357 (23%), Positives = 138/357 (38%), Gaps = 84/357 (23%)

Query: 77   SFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEA 136
            ++N +   + K+R  +  I  Y  L+S G  P   T   L++       GL    RI++A
Sbjct: 952  TYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLD-------GLLKAGRIEDA 1004

Query: 137  TWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSY 196
              LF  M+ +G + +   Y  L+NG    GN      L + MV    + G+    +I SY
Sbjct: 1005 ENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMV----DQGI--NPDIKSY 1058

Query: 197  SIIIDSLCKEG--------------------------LVD---------KAKELFLEMKG 221
            +IIID+LCK G                          L+D         +A  LF EM+ 
Sbjct: 1059 TIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQK 1118

Query: 222  RGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINE 281
            +GI P +    +LI     AG   E   ++ E+L  G +PN+ T+N              
Sbjct: 1119 KGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYN-------------- 1164

Query: 282  ANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILIN 341
                                 +L+ GY + G  D+A   +  M   GC     + +   +
Sbjct: 1165 ---------------------ALIRGYSVSGSTDSAYAAYGRMIVGGCLPNSSTDSSNCS 1203

Query: 342  GYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYN 398
                +  V + ++ +R    N    T   +  L  G  +   AG AQ++ D  +++N
Sbjct: 1204 SPEAVGTVRKQITSHRS-YHNAKEPTTKAWRWLSKGCLRRAAAGNAQQIADGWRMHN 1259


>gi|242036829|ref|XP_002465809.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
 gi|241919663|gb|EER92807.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
          Length = 649

 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 145/505 (28%), Positives = 256/505 (50%), Gaps = 17/505 (3%)

Query: 41  LNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRK 100
           LN  +H  CKS  +  ++A      M      P + + N+L  A  +    DA I+    
Sbjct: 160 LNIMVHSYCKS--LEFDKADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIALVDS 217

Query: 101 LVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLIN 160
           + + GL P  +T N ++       +GLC   R  +A  +F+ M    V PDV ++  LI 
Sbjct: 218 MANKGLKPGIVTFNSVL-------KGLCKHRRFDKAKEVFRAMDQCSVAPDVRSFNILIG 270

Query: 161 GFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMK 220
           GFCR G +  A++ +K+M     + G+    ++ S+S +I      G +D A     EMK
Sbjct: 271 GFCRVGEVEEAMKFYKEM----QQRGVTP--DVVSFSCLIGLFSTRGKMDHAAAYLREMK 324

Query: 221 GRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKIN 280
           G G+ P  V+ T +I GFC AG+  E   +  EM+ LG  P+++T+N +++ LCK  ++ 
Sbjct: 325 GLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLL 384

Query: 281 EANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILI 340
           +A  LL  M +RG+ PD  T+ +L+ GYC  G  + A ++F ++  +  +  VV+YN LI
Sbjct: 385 DAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLI 444

Query: 341 NGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVE 400
           +G C+  ++ +A  L+  + +  +    +TY+ L+    + GQ   A    DEM      
Sbjct: 445 DGMCRKGDLAKANELWDDMHAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKGNL 504

Query: 401 PDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWEL 460
           P++ TYN +I G C++  V++  +    +  +     +  FN LI G  K   +  A+ +
Sbjct: 505 PNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDNILPDLITFNTLIHGYIKEENMHGAFNV 564

Query: 461 FHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQ 520
           F+ + ++ + P  VTY+++I+G   +G +E+A      M  +G  P+  T+ +L++G + 
Sbjct: 565 FNIMEKEMVQPDAVTYNMIINGFSEQGNMEEAGRVFKKMGASGIEPDRYTYMSLINGHVT 624

Query: 521 NNKTSKVVELLHKMAEPERNLVPDD 545
              + +  +L  +M    R   PDD
Sbjct: 625 AGNSKEAFQLHDEMM--HRGFAPDD 647



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 139/473 (29%), Positives = 235/473 (49%), Gaps = 17/473 (3%)

Query: 98  YRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGT 157
           YR ++S     +  TLNI+++ +       C      +A  +   M    V PDV+T+  
Sbjct: 145 YRLVLSSDSEVNAYTLNIMVHSY-------CKSLEFDKADTVISEMEKRCVFPDVVTHNV 197

Query: 158 LINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFL 217
           LI+   R G++  A+ L   M +     GL  K  I +++ ++  LCK    DKAKE+F 
Sbjct: 198 LIDARFRAGDVDAAIALVDSMAN----KGL--KPGIVTFNSVLKGLCKHRRFDKAKEVFR 251

Query: 218 EMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGG 277
            M    + P V     LI GFC  G  EE    + EM   G  P++++F+ +I      G
Sbjct: 252 AMDQCSVAPDVRSFNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRG 311

Query: 278 KINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYN 337
           K++ A   L  M   GL PD   Y  ++ G+C  G +  A  +   M   GC   VV+YN
Sbjct: 312 KMDHAAAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYN 371

Query: 338 ILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLY 397
            L+NG CK   + +A  L  ++   GV   + T+ TL+ G  + G    A +LFD +   
Sbjct: 372 TLLNGLCKQHRLLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQ 431

Query: 398 NVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNA 457
            + PD+  YN LIDG+C+   + +A +L+  +   +       ++ LID  C+ G+++ A
Sbjct: 432 RLRPDVVAYNSLIDGMCRKGDLAKANELWDDMHAREIFPNHVTYSILIDSHCEKGQVEEA 491

Query: 458 WELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHG 517
           +    ++  KG +P ++TY+ +I G CR G ++K   FL  M ++   P+++TFNTL+HG
Sbjct: 492 FGFLDEMVSKGNLPNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDNILPDLITFNTLIHG 551

Query: 518 FLQNNKTSKVVELLHKMAEPERNLV-PDDTTFSIVVDLLAKDEKYHECSAVSK 569
           +++         + + M   E+ +V PD  T++++++  ++     E   V K
Sbjct: 552 YIKEENMHGAFNVFNIM---EKEMVQPDAVTYNMIINGFSEQGNMEEAGRVFK 601



 Score =  125 bits (313), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 87/346 (25%), Positives = 160/346 (46%), Gaps = 37/346 (10%)

Query: 254 MLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGR 313
           +L   P P    F+++I    +  K  EA     L++   +       N+L+      G 
Sbjct: 78  LLASSPTPQPQVFDLLIRTYTQSRKPREAFEAFRLLLDHRVPVPASASNALLAALSRAGW 137

Query: 314 IDTAREIFLSMHSKGCKHTVVSYNILINGYCKIL-------------------------- 347
              A E +  + S   +    + NI+++ YCK L                          
Sbjct: 138 PHLAEEAYRLVLSSDSEVNAYTLNIMVHSYCKSLEFDKADTVISEMEKRCVFPDVVTHNV 197

Query: 348 ---------NVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYN 398
                    +V+ A++L   + + G++  ++T+N++L GL +  +   A+++F  M   +
Sbjct: 198 LIDARFRAGDVDAAIALVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCS 257

Query: 399 VEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAW 458
           V PD+ ++NILI G C+   V+EA+K +  ++       +  F+CLI      G++D+A 
Sbjct: 258 VAPDVRSFNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAA 317

Query: 459 ELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGF 518
               ++   GLVP  V Y+++I G CR G + +A      M   GC P+VVT+NTL++G 
Sbjct: 318 AYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGL 377

Query: 519 LQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHEC 564
            + ++     ELL++M   ER + PD  TF+ ++    +D  + + 
Sbjct: 378 CKQHRLLDAEELLNEMK--ERGVTPDLCTFTTLIHGYCRDGNFEKA 421


>gi|115470153|ref|NP_001058675.1| Os07g0101200 [Oryza sativa Japonica Group]
 gi|50508922|dbj|BAD31827.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|113610211|dbj|BAF20589.1| Os07g0101200 [Oryza sativa Japonica Group]
          Length = 738

 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 167/564 (29%), Positives = 264/564 (46%), Gaps = 39/564 (6%)

Query: 57  NEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNIL 116
           ++AR  F  M H    P +++FN +  A+ K            K++  G+  +  T NI 
Sbjct: 171 HDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIW 230

Query: 117 INCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHK 176
           I       RGLC   R+ EA  L   M A+ V PDV+TY TLI G C+      A+   +
Sbjct: 231 I-------RGLCEAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLR 282

Query: 177 KMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIH 236
           +M++     G +     F+Y+ IID  CK  +V +A EL  +   +G  P  V   +LI+
Sbjct: 283 RMMN----QGCLPDD--FTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLIN 336

Query: 237 GFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNP 296
           G C  G+ E    LF E    G +P+++ +N ++  LC  G I  A  ++  M + G +P
Sbjct: 337 GLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHP 396

Query: 297 DRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLY 356
           D  TYN +++G C +G I  A  +      KG    V ++N LI+GYCK L ++ A+ L 
Sbjct: 397 DIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLV 456

Query: 357 RQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKN 416
            ++   G+    ITYN++L+GL +AG+     + F EM L    P+  TYNILI+  C++
Sbjct: 457 ERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRS 516

Query: 417 NCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTY 476
           N ++EA K+   +           FN LI G C+ G L+ A+ LF KL +KG   T  T+
Sbjct: 517 NKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTF 576

Query: 477 SIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAE 536
           + +I     K  +  A      M   G   +  T+  L+ G  +     +    +H +  
Sbjct: 577 NTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRA--YMHLVEM 634

Query: 537 PERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKSSYRACLYVTIFQPSSLGSMIGCTVRL 596
            ++  +P  +TF  V++ L  + +                   +FQ   +   I   V++
Sbjct: 635 IKKGFIPSMSTFGRVINSLTVNHR-------------------VFQAVGI---IHIMVKI 672

Query: 597 MPQPEMSDT-LGDDGDGNAGPIIL 619
              PE+ DT L  D    A P IL
Sbjct: 673 GVVPEVVDTILNADKKEIAAPKIL 696



 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 143/497 (28%), Positives = 251/497 (50%), Gaps = 20/497 (4%)

Query: 56  LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNI 115
           L +A   F  M      P   ++N +  A+    ++D     Y ++++ G+ PD  T  I
Sbjct: 69  LRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRMLAAGVSPDLHTHTI 128

Query: 116 LINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLH 175
                  + R  C+  R   A  L + +   G     + Y T++ G    G+   A +L 
Sbjct: 129 -------RLRSFCLTARPHIALRLLRALPHRGA----VAYCTVVCGLYAHGHTHDARQLF 177

Query: 176 KKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLI 235
            +M+            N+ +++ ++ +LCK G V +A  L  ++  RG++  +      I
Sbjct: 178 DQMLHTHV------FPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWI 231

Query: 236 HGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLN 295
            G C AG   E   L ++ +     P+++T+N +I  LCK     EA   L  M+ +G  
Sbjct: 232 RGLCEAGRLPEAVRL-VDGMRAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCL 290

Query: 296 PDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSL 355
           PD FTYN+++DGYC +  +  A E+      KG     V+Y  LING C   +VE A+ L
Sbjct: 291 PDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALEL 350

Query: 356 YRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCK 415
           + +  + G++  ++ YN+L+ GL   G   +A ++ +EM      PD+ TYNI+I+GLCK
Sbjct: 351 FNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCK 410

Query: 416 NNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVT 475
              + +A  + +   M  +   +  FN LIDG CK  +LD+A +L  ++ + G+ P  +T
Sbjct: 411 MGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTIT 470

Query: 476 YSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMA 535
           Y+ +++GLC+ GK+ + N+    M   GC PN +T+N L+  F ++NK  +  +++ KM+
Sbjct: 471 YNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMS 530

Query: 536 EPERNLVPDDTTFSIVV 552
             +  L PD  +F+ ++
Sbjct: 531 --QEGLHPDAVSFNTLI 545



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 108/397 (27%), Positives = 181/397 (45%), Gaps = 39/397 (9%)

Query: 195 SYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVV--VCTTLIHGFCCAGNWEEVNGLFI 252
           +Y  +I  L   G VD         + R ++PA +  +    I  +  AG   +    F 
Sbjct: 19  AYCALIRPLASAGRVDAVDAAVASARSR-LSPATIHPLYVASIRAYARAGRLRDAVDAFE 77

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
            M      P    +N ++D L      ++A+ +   M+  G++PD  T+   +  +CL  
Sbjct: 78  RMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRMLAAGVSPDLHTHTIRLRSFCLTA 137

Query: 313 RIDTAREIFLSMHSKGC-------------KHT------------------VVSYNILIN 341
           R   A  +  ++  +G               HT                  + ++N +++
Sbjct: 138 RPHIALRLLRALPHRGAVAYCTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLH 197

Query: 342 GYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEP 401
             CK  +V EA  L  ++I  G+   + TYN  + GL +AG+   A +L D M+ Y V P
Sbjct: 198 ALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAV-P 256

Query: 402 DLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEI-FNCLIDGLCKAGRLDNAWEL 460
           D+ TYN LI GLCK +  QEA+     + MN+     +  +N +IDG CK   +  A EL
Sbjct: 257 DVVTYNTLIRGLCKKSMPQEAMHYLRRM-MNQGCLPDDFTYNTIIDGYCKISMVQEATEL 315

Query: 461 FHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQ 520
                 KG VP  VTY  +I+GLC +G +E+A +     +  G  P++V +N+L+ G   
Sbjct: 316 LKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCL 375

Query: 521 NNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAK 557
                  ++++++MA  E    PD  T++IV++ L K
Sbjct: 376 QGLILHALQVMNEMA--EEGCHPDIQTYNIVINGLCK 410


>gi|12583808|gb|AAG59660.1|AC084319_18 putative membrane-associated salt-inducible protein [Oryza sativa
           Japonica Group]
          Length = 772

 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 138/456 (30%), Positives = 226/456 (49%), Gaps = 13/456 (2%)

Query: 79  NLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATW 138
           NL+  A+ +    D  +   RKL   G   D ++ N ++       +GLC+  R  +   
Sbjct: 185 NLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVL-------KGLCMAKRWGDVEE 237

Query: 139 LFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSI 198
           L   M+     P+++T+ TLI   CR G      R+H+ +     E+G     +I  Y+ 
Sbjct: 238 LMDEMVRVDCAPNIVTFNTLIGYLCRNGLFE---RVHEVLAQMS-EHG--CTPDIRMYAT 291

Query: 199 IIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLG 258
           IID +CKEG ++ A E+   M   G+ P VV   T++ G C A  W+E   L  EM    
Sbjct: 292 IIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKD 351

Query: 259 PRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAR 318
              + +TFN+++D  C+ G ++    LLE M+  G  PD  TY ++++G+C  G ID A 
Sbjct: 352 CPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAV 411

Query: 319 EIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGL 378
            +  SM S GCK   VSY I++ G C      +A  L  Q+I  G     +T+NTL++ L
Sbjct: 412 MLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFL 471

Query: 379 FQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGI 438
            + G    A +L  +M +    PDL +Y+ +IDGL K    +EA++L +++         
Sbjct: 472 CKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNT 531

Query: 439 EIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLY 498
            I++ +   L + GR++   ++F  +    +    V Y+ +I  LC++ + ++A DF  Y
Sbjct: 532 IIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAY 591

Query: 499 MEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKM 534
           M  NGC PN  T+  L+ G        +  ELL ++
Sbjct: 592 MVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSEL 627



 Score =  188 bits (477), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 112/403 (27%), Positives = 193/403 (47%), Gaps = 13/403 (3%)

Query: 66  MTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKER 125
           M  +  +P I +FN L G + +N  ++ V     ++   G  PD      +I+       
Sbjct: 242 MVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIID------- 294

Query: 126 GLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYEN 185
           G+C E  ++ A  +   M ++G++P+V+ Y T++ G C       A  L  +M   D   
Sbjct: 295 GICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKD--- 351

Query: 186 GLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWE 245
                 +  +++I++D  C+ GLVD+  EL  +M   G  P V+  TT+I+GFC  G  +
Sbjct: 352 ---CPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLID 408

Query: 246 EVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLM 305
           E   L   M   G +PN +++ +++  LC  G+  +A  L+  MIQ+G  P+  T+N+L+
Sbjct: 409 EAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLI 468

Query: 306 DGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVR 365
           +  C  G ++ A E+   M   GC   ++SY+ +I+G  K    EEA+ L   +++ G+ 
Sbjct: 469 NFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGIS 528

Query: 366 QTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKL 425
              I Y+++   L + G+     ++FD +K   +  D   YN +I  LCK      A+  
Sbjct: 529 PNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDF 588

Query: 426 FHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKG 468
           F  +  N        +  LI GL   G    A EL  +L  +G
Sbjct: 589 FAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRG 631



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 123/468 (26%), Positives = 214/468 (45%), Gaps = 43/468 (9%)

Query: 125 RGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYE 184
           RGLC   RI +A  +   M   G  P    Y  ++   CR+G    ++R+ + M    + 
Sbjct: 119 RGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAM----HA 174

Query: 185 NGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNW 244
            G    T   + +++++++C++G VD+A  L  ++   G    +V    ++ G C A  W
Sbjct: 175 KGCTLDTG--NCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRW 232

Query: 245 EEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSL 304
            +V  L  EM+ +   PN++TFN +I  LC+ G     + +L  M + G  PD   Y ++
Sbjct: 233 GDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATI 292

Query: 305 MDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGV 364
           +DG C  G ++ A EI   M S G K  VV YN ++ G C     +EA  L  ++     
Sbjct: 293 IDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDC 352

Query: 365 RQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVK 424
               +T+N L+    Q G      +L ++M  +   PD+ TY  +I+G CK   + EAV 
Sbjct: 353 PLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVM 412

Query: 425 LFHML-----EMNKFEFGIEI------------------------------FNCLIDGLC 449
           L   +     + N   + I +                              FN LI+ LC
Sbjct: 413 LLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLC 472

Query: 450 KAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVV 509
           K G ++ A EL  ++   G  P +++YS +I GL + GK E+A + L  M   G +PN +
Sbjct: 473 KKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTI 532

Query: 510 TFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAK 557
            ++++     +  + +KV+++   +   +  +  D   ++ V+  L K
Sbjct: 533 IYSSIACALSREGRVNKVIQMFDNIK--DTTIRSDAVLYNAVISSLCK 578



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 111/416 (26%), Positives = 199/416 (47%), Gaps = 8/416 (1%)

Query: 148 VRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEG 207
           V P+  T+  ++ G C  G ++ AL +  +M       G      +  Y +I+++ C+ G
Sbjct: 107 VPPNAYTFFPVVRGLCTRGRIADALEVLDEMSF----KGCAPIPPM--YHVILEAACRSG 160

Query: 208 LVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFN 267
               +  +   M  +G       C  +++  C  G  +E  GL  ++   G   +++++N
Sbjct: 161 GFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYN 220

Query: 268 VMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSK 327
            ++  LC   +  +   L++ M++    P+  T+N+L+   C  G  +   E+   M   
Sbjct: 221 AVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEH 280

Query: 328 GCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYA 387
           GC   +  Y  +I+G CK  ++E A  +  ++ S G++  V+ YNT+L GL  A +   A
Sbjct: 281 GCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEA 340

Query: 388 QKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDG 447
           ++L  EM   +   D  T+NIL+D  C+N  V   ++L   +  +     +  +  +I+G
Sbjct: 341 EELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVING 400

Query: 448 LCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPN 507
            CK G +D A  L   +   G  P  V+Y+I++ GLC  G+   A + +  M + GC PN
Sbjct: 401 FCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPN 460

Query: 508 VVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
            VTFNTL++   +     + +ELL +M        PD  ++S V+D L K  K  E
Sbjct: 461 PVTFNTLINFLCKKGLVEQAIELLKQML--VNGCSPDLISYSTVIDGLGKAGKTEE 514



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 53/222 (23%), Positives = 90/222 (40%), Gaps = 14/222 (6%)

Query: 58  EARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILI 117
           +A      M      P   +FN L   + K    +  I   ++++  G  PD ++ + +I
Sbjct: 444 DAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVI 503

Query: 118 NCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKK 177
           +       GL    + +EA  L   M+  G+ P+ I Y ++     R G      R++K 
Sbjct: 504 D-------GLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREG------RVNKV 550

Query: 178 MVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHG 237
           +   D       +++   Y+ +I SLCK    D+A + F  M   G  P     T LI G
Sbjct: 551 IQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKG 610

Query: 238 FCCAGNWEEVNGLFIEMLDLGP-RPNLLTFNVMIDCLCKGGK 278
               G  +E   L  E+   G  R +L+    + +C  + GK
Sbjct: 611 LASEGLAKEAQELLSELCSRGALRKHLMRHFGISNCTQENGK 652


>gi|115453829|ref|NP_001050515.1| Os03g0569800 [Oryza sativa Japonica Group]
 gi|113548986|dbj|BAF12429.1| Os03g0569800 [Oryza sativa Japonica Group]
          Length = 773

 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 138/456 (30%), Positives = 226/456 (49%), Gaps = 13/456 (2%)

Query: 79  NLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATW 138
           NL+  A+ +    D  +   RKL   G   D ++ N ++       +GLC+  R  +   
Sbjct: 185 NLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVL-------KGLCMAKRWGDVEE 237

Query: 139 LFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSI 198
           L   M+     P+++T+ TLI   CR G      R+H+ +     E+G     +I  Y+ 
Sbjct: 238 LMDEMVRVDCAPNIVTFNTLIGYLCRNGLFE---RVHEVLAQMS-EHG--CTPDIRMYAT 291

Query: 199 IIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLG 258
           IID +CKEG ++ A E+   M   G+ P VV   T++ G C A  W+E   L  EM    
Sbjct: 292 IIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKD 351

Query: 259 PRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAR 318
              + +TFN+++D  C+ G ++    LLE M+  G  PD  TY ++++G+C  G ID A 
Sbjct: 352 CPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAV 411

Query: 319 EIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGL 378
            +  SM S GCK   VSY I++ G C      +A  L  Q+I  G     +T+NTL++ L
Sbjct: 412 MLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFL 471

Query: 379 FQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGI 438
            + G    A +L  +M +    PDL +Y+ +IDGL K    +EA++L +++         
Sbjct: 472 CKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNT 531

Query: 439 EIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLY 498
            I++ +   L + GR++   ++F  +    +    V Y+ +I  LC++ + ++A DF  Y
Sbjct: 532 IIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAY 591

Query: 499 MEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKM 534
           M  NGC PN  T+  L+ G        +  ELL ++
Sbjct: 592 MVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSEL 627



 Score =  188 bits (477), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 112/403 (27%), Positives = 193/403 (47%), Gaps = 13/403 (3%)

Query: 66  MTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKER 125
           M  +  +P I +FN L G + +N  ++ V     ++   G  PD      +I+       
Sbjct: 242 MVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIID------- 294

Query: 126 GLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYEN 185
           G+C E  ++ A  +   M ++G++P+V+ Y T++ G C       A  L  +M   D   
Sbjct: 295 GICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKD--- 351

Query: 186 GLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWE 245
                 +  +++I++D  C+ GLVD+  EL  +M   G  P V+  TT+I+GFC  G  +
Sbjct: 352 ---CPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLID 408

Query: 246 EVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLM 305
           E   L   M   G +PN +++ +++  LC  G+  +A  L+  MIQ+G  P+  T+N+L+
Sbjct: 409 EAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLI 468

Query: 306 DGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVR 365
           +  C  G ++ A E+   M   GC   ++SY+ +I+G  K    EEA+ L   +++ G+ 
Sbjct: 469 NFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGIS 528

Query: 366 QTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKL 425
              I Y+++   L + G+     ++FD +K   +  D   YN +I  LCK      A+  
Sbjct: 529 PNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDF 588

Query: 426 FHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKG 468
           F  +  N        +  LI GL   G    A EL  +L  +G
Sbjct: 589 FAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRG 631



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 123/468 (26%), Positives = 214/468 (45%), Gaps = 43/468 (9%)

Query: 125 RGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYE 184
           RGLC   RI +A  +   M   G  P    Y  ++   CR+G    ++R+ + M    + 
Sbjct: 119 RGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAM----HA 174

Query: 185 NGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNW 244
            G    T   + +++++++C++G VD+A  L  ++   G    +V    ++ G C A  W
Sbjct: 175 KGCTLDTG--NCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRW 232

Query: 245 EEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSL 304
            +V  L  EM+ +   PN++TFN +I  LC+ G     + +L  M + G  PD   Y ++
Sbjct: 233 GDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATI 292

Query: 305 MDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGV 364
           +DG C  G ++ A EI   M S G K  VV YN ++ G C     +EA  L  ++     
Sbjct: 293 IDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDC 352

Query: 365 RQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVK 424
               +T+N L+    Q G      +L ++M  +   PD+ TY  +I+G CK   + EAV 
Sbjct: 353 PLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVM 412

Query: 425 LFHML-----EMNKFEFGIEI------------------------------FNCLIDGLC 449
           L   +     + N   + I +                              FN LI+ LC
Sbjct: 413 LLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLC 472

Query: 450 KAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVV 509
           K G ++ A EL  ++   G  P +++YS +I GL + GK E+A + L  M   G +PN +
Sbjct: 473 KKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTI 532

Query: 510 TFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAK 557
            ++++     +  + +KV+++   +   +  +  D   ++ V+  L K
Sbjct: 533 IYSSIACALSREGRVNKVIQMFDNIK--DTTIRSDAVLYNAVISSLCK 578



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 111/416 (26%), Positives = 199/416 (47%), Gaps = 8/416 (1%)

Query: 148 VRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEG 207
           V P+  T+  ++ G C  G ++ AL +  +M       G      +  Y +I+++ C+ G
Sbjct: 107 VPPNAYTFFPVVRGLCTRGRIADALEVLDEMSF----KGCAPIPPM--YHVILEAACRSG 160

Query: 208 LVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFN 267
               +  +   M  +G       C  +++  C  G  +E  GL  ++   G   +++++N
Sbjct: 161 GFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYN 220

Query: 268 VMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSK 327
            ++  LC   +  +   L++ M++    P+  T+N+L+   C  G  +   E+   M   
Sbjct: 221 AVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEH 280

Query: 328 GCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYA 387
           GC   +  Y  +I+G CK  ++E A  +  ++ S G++  V+ YNT+L GL  A +   A
Sbjct: 281 GCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEA 340

Query: 388 QKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDG 447
           ++L  EM   +   D  T+NIL+D  C+N  V   ++L   +  +     +  +  +I+G
Sbjct: 341 EELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVING 400

Query: 448 LCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPN 507
            CK G +D A  L   +   G  P  V+Y+I++ GLC  G+   A + +  M + GC PN
Sbjct: 401 FCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPN 460

Query: 508 VVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
            VTFNTL++   +     + +ELL +M        PD  ++S V+D L K  K  E
Sbjct: 461 PVTFNTLINFLCKKGLVEQAIELLKQML--VNGCSPDLISYSTVIDGLGKAGKTEE 514



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 53/222 (23%), Positives = 90/222 (40%), Gaps = 14/222 (6%)

Query: 58  EARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILI 117
           +A      M      P   +FN L   + K    +  I   ++++  G  PD ++ + +I
Sbjct: 444 DAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVI 503

Query: 118 NCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKK 177
           +       GL    + +EA  L   M+  G+ P+ I Y ++     R G      R++K 
Sbjct: 504 D-------GLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREG------RVNKV 550

Query: 178 MVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHG 237
           +   D       +++   Y+ +I SLCK    D+A + F  M   G  P     T LI G
Sbjct: 551 IQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKG 610

Query: 238 FCCAGNWEEVNGLFIEMLDLGP-RPNLLTFNVMIDCLCKGGK 278
               G  +E   L  E+   G  R +L+    + +C  + GK
Sbjct: 611 LASEGLAKEAQELLSELCSRGALRKHLMRHFGISNCTQENGK 652


>gi|356562834|ref|XP_003549673.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g74580-like [Glycine max]
          Length = 747

 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 142/483 (29%), Positives = 248/483 (51%), Gaps = 15/483 (3%)

Query: 90  HYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVR 149
            +D     + ++++  L PD +  N L++        LC +  + E+  L   ++  GV 
Sbjct: 196 EHDHARELFDEMLARCLCPDVVAFNKLVHV-------LCKKGLVFESERLLGKVLKRGVC 248

Query: 150 PDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLIS---KTNIFSYSIIIDSLCKE 206
           P++ T+   + G CR G L  A+R  + + + +Y   +++   + +  +Y+ IID  CK+
Sbjct: 249 PNLFTFNIFVQGLCREGALDRAVRNSRVVEAEEYLRKMVNGGFEPDDLTYNSIIDGYCKK 308

Query: 207 GLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTF 266
           G+V  A  +  +   +G  P      +LI+GFC  G+ +    +F + L  G RP+++ +
Sbjct: 309 GMVQDANRVLKDAVFKGFKPDEFTYCSLINGFCKDGDPDRAMAVFKDGLGKGLRPSIVLY 368

Query: 267 NVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHS 326
           N +I  L + G I  A  L+  M + G  P+ +TYN +++G C +G +  A  +     +
Sbjct: 369 NTLIKGLSQQGLILPALQLMNEMAENGCLPNIWTYNLVINGLCKMGCVSDASHLVDDAIA 428

Query: 327 KGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGY 386
           KGC   + +YN LI+GYCK L ++ A  +  ++ S G+   VITYNTLL+GL +AG++  
Sbjct: 429 KGCPPDIFTYNTLIDGYCKQLKLDSATEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEE 488

Query: 387 AQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLID 446
             ++F  M+     P++ TYNI++D LCK   V EAV L   ++    +  +  F  L  
Sbjct: 489 VMEIFKAMEEKGCTPNIITYNIIVDSLCKAKKVNEAVDLLGEMKSKGLKPDVVSFGTLFT 548

Query: 447 GLCKAGRLDNAWELFHKL-PQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCA 505
           G CK G +D A++LF ++  Q  +  T  TY+I++     +  +  A      M+ +GC 
Sbjct: 549 GFCKIGDIDGAYQLFRRMEKQYDVCHTTATYNIIVSAFSEQLNMNMAMKLFSVMKNSGCD 608

Query: 506 PNVVTFNTLMHGFLQ-NNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHEC 564
           P+  T+  ++ GF +  N T     LL  M   E+  +P  TTF  V++ L   +K HE 
Sbjct: 609 PDNYTYRVVIDGFCKMGNITQGYKFLLENM---EKRFIPSLTTFGRVLNCLCVKDKVHEA 665

Query: 565 SAV 567
             +
Sbjct: 666 VGI 668



 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 159/561 (28%), Positives = 276/561 (49%), Gaps = 36/561 (6%)

Query: 4   RTQFRCLFSSETVSKVKLSSLFKSPRQIAAV----SSPETQLNEFLHENCK--SGIINLN 57
           R + R + S      +++ S  K+ R  AA+    + PE   +      C   +G+ +  
Sbjct: 136 RMRDRGVQSDVYTYTIRIKSFCKTARPYAALRLLRNMPELGCDSNAVAYCTVVAGLYDSG 195

Query: 58  E---ARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLN 114
           E   AR  F  M      P + +FN L   + K            K++  G+ P+  T N
Sbjct: 196 EHDHARELFDEMLARCLCPDVVAFNKLVHVLCKKGLVFESERLLGKVLKRGVCPNLFTFN 255

Query: 115 ILINCFGNKERGLCVE---------NRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRT 165
           I +       +GLC E         +R+ EA    + M+  G  PD +TY ++I+G+C+ 
Sbjct: 256 IFV-------QGLCREGALDRAVRNSRVVEAEEYLRKMVNGGFEPDDLTYNSIIDGYCKK 308

Query: 166 GNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGIN 225
           G +  A R+ K  V   +      K + F+Y  +I+  CK+G  D+A  +F +  G+G+ 
Sbjct: 309 GMVQDANRVLKDAVFKGF------KPDEFTYCSLINGFCKDGDPDRAMAVFKDGLGKGLR 362

Query: 226 PAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGL 285
           P++V+  TLI G    G       L  EM + G  PN+ T+N++I+ LCK G +++A+ L
Sbjct: 363 PSIVLYNTLIKGLSQQGLILPALQLMNEMAENGCLPNIWTYNLVINGLCKMGCVSDASHL 422

Query: 286 LELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCK 345
           ++  I +G  PD FTYN+L+DGYC   ++D+A E+   M S+G    V++YN L+NG CK
Sbjct: 423 VDDAIAKGCPPDIFTYNTLIDGYCKQLKLDSATEMVNRMWSQGMTPDVITYNTLLNGLCK 482

Query: 346 ILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLST 405
               EE M +++ +   G    +ITYN ++  L +A +   A  L  EMK   ++PD+ +
Sbjct: 483 AGKSEEVMEIFKAMEEKGCTPNIITYNIIVDSLCKAKKVNEAVDLLGEMKSKGLKPDVVS 542

Query: 406 YNILIDGLCKNNCVQEAVKLFHMLEMNKFEF--GIEIFNCLIDGLCKAGRLDNAWELFHK 463
           +  L  G CK   +  A +LF  +E  +++       +N ++    +   ++ A +LF  
Sbjct: 543 FGTLFTGFCKIGDIDGAYQLFRRME-KQYDVCHTTATYNIIVSAFSEQLNMNMAMKLFSV 601

Query: 464 LPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNK 523
           +   G  P   TY ++I G C+ G + +   FLL   +    P++ TF  +++     +K
Sbjct: 602 MKNSGCDPDNYTYRVVIDGFCKMGNITQGYKFLLENMEKRFIPSLTTFGRVLNCLCVKDK 661

Query: 524 TSKVVELLHKMAEPERNLVPD 544
             + V ++H M   ++ +VP+
Sbjct: 662 VHEAVGIIHLML--QKGIVPE 680



 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 145/467 (31%), Positives = 224/467 (47%), Gaps = 51/467 (10%)

Query: 135 EATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIF 194
           +A  ++  M   GV+ DV TY   I  FC+T     ALRL + M        L   +N  
Sbjct: 129 QAHKVYMRMRDRGVQSDVYTYTIRIKSFCKTARPYAALRLLRNMPE------LGCDSNAV 182

Query: 195 SYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEM 254
           +Y  ++  L   G  D A+ELF EM  R + P VV    L+H  C  G   E   L  ++
Sbjct: 183 AYCTVVAGLYDSGEHDHARELFDEMLARCLCPDVVAFNKLVHVLCKKGLVFESERLLGKV 242

Query: 255 LDLGPRPNLLTFNVMIDCLCKGGKIN---------EANGLLELMIQRGLNPDRFTYNSLM 305
           L  G  PNL TFN+ +  LC+ G ++         EA   L  M+  G  PD  TYNS++
Sbjct: 243 LKRGVCPNLFTFNIFVQGLCREGALDRAVRNSRVVEAEEYLRKMVNGGFEPDDLTYNSII 302

Query: 306 DGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVR 365
           DGYC  G +  A  +      KG K    +Y  LING+CK  + + AM++++  +  G+R
Sbjct: 303 DGYCKKGMVQDANRVLKDAVFKGFKPDEFTYCSLINGFCKDGDPDRAMAVFKDGLGKGLR 362

Query: 366 QTVITYNTLLSGLFQAGQAGYAQKLFDEMK---------LYNV----------------- 399
            +++ YNTL+ GL Q G    A +L +EM           YN+                 
Sbjct: 363 PSIVLYNTLIKGLSQQGLILPALQLMNEMAENGCLPNIWTYNLVINGLCKMGCVSDASHL 422

Query: 400 ---------EPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCK 450
                     PD+ TYN LIDG CK   +  A ++ + +        +  +N L++GLCK
Sbjct: 423 VDDAIAKGCPPDIFTYNTLIDGYCKQLKLDSATEMVNRMWSQGMTPDVITYNTLLNGLCK 482

Query: 451 AGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVT 510
           AG+ +   E+F  + +KG  P ++TY+I++  LC+  K+ +A D L  M+  G  P+VV+
Sbjct: 483 AGKSEEVMEIFKAMEEKGCTPNIITYNIIVDSLCKAKKVNEAVDLLGEMKSKGLKPDVVS 542

Query: 511 FNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAK 557
           F TL  GF +        +L  +M E + ++     T++I+V   ++
Sbjct: 543 FGTLFTGFCKIGDIDGAYQLFRRM-EKQYDVCHTTATYNIIVSAFSE 588



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 143/531 (26%), Positives = 241/531 (45%), Gaps = 63/531 (11%)

Query: 41  LNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVI----- 95
            N+ +H  CK G++   E+    G +      P + +FN+    + +    D  +     
Sbjct: 219 FNKLVHVLCKKGLVF--ESERLLGKVLKRGVCPNLFTFNIFVQGLCREGALDRAVRNSRV 276

Query: 96  ----SFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPD 151
                + RK+V+ G  PD LT N +I+       G C +  +++A  + K+ +  G +PD
Sbjct: 277 VEAEEYLRKMVNGGFEPDDLTYNSIID-------GYCKKGMVQDANRVLKDAVFKGFKPD 329

Query: 152 VITYGTLINGFCRTGN---------------LSVALRLHKKMVSGDYENGLISKT----- 191
             TY +LINGFC+ G+               L  ++ L+  ++ G  + GLI        
Sbjct: 330 EFTYCSLINGFCKDGDPDRAMAVFKDGLGKGLRPSIVLYNTLIKGLSQQGLILPALQLMN 389

Query: 192 ---------NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAG 242
                    NI++Y+++I+ LCK G V  A  L  +   +G  P +    TLI G+C   
Sbjct: 390 EMAENGCLPNIWTYNLVINGLCKMGCVSDASHLVDDAIAKGCPPDIFTYNTLIDGYCKQL 449

Query: 243 NWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYN 302
             +    +   M   G  P+++T+N +++ LCK GK  E   + + M ++G  P+  TYN
Sbjct: 450 KLDSATEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEEVMEIFKAMEEKGCTPNIITYN 509

Query: 303 SLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISN 362
            ++D  C   +++ A ++   M SKG K  VVS+  L  G+CKI +++ A  L+R++   
Sbjct: 510 IIVDSLCKAKKVNEAVDLLGEMKSKGLKPDVVSFGTLFTGFCKIGDIDGAYQLFRRMEKQ 569

Query: 363 -GVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQE 421
             V  T  TYN ++S   +      A KLF  MK    +PD  TY ++IDG CK   + +
Sbjct: 570 YDVCHTTATYNIIVSAFSEQLNMNMAMKLFSVMKNSGCDPDNYTYRVVIDGFCKMGNITQ 629

Query: 422 AVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVP---------- 471
             K        +F   +  F  +++ LC   ++  A  + H + QKG+VP          
Sbjct: 630 GYKFLLENMEKRFIPSLTTFGRVLNCLCVKDKVHEAVGIIHLMLQKGIVPETVNTIFEAD 689

Query: 472 --TVVTYSIMIHGLCRKGKLEKANDFLLY---MEKNGCAPNVVTFNTLMHG 517
              V    I++  L +KG +      LLY    +K      + T N+L  G
Sbjct: 690 KKVVAAPKILVEDLLKKGHIAYYTYELLYDGIRDKKILKKRLPTVNSLHRG 740



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 99/365 (27%), Positives = 173/365 (47%), Gaps = 11/365 (3%)

Query: 205 KEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLL 264
           ++G V +A + F  M     +P+V     +++     G   + + +++ M D G + ++ 
Sbjct: 88  RKGKVQEAVDTFERMDFYNCDPSVHSHNAIMNILVEFGYHNQAHKVYMRMRDRGVQSDVY 147

Query: 265 TFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSM 324
           T+ + I   CK  +   A  LL  M + G + +   Y +++ G    G  D ARE+F  M
Sbjct: 148 TYTIRIKSFCKTARPYAALRLLRNMPELGCDSNAVAYCTVVAGLYDSGEHDHARELFDEM 207

Query: 325 HSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAG-- 382
            ++     VV++N L++  CK   V E+  L  +++  GV   + T+N  + GL + G  
Sbjct: 208 LARCLCPDVVAFNKLVHVLCKKGLVFESERLLGKVLKRGVCPNLFTFNIFVQGLCREGAL 267

Query: 383 -------QAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFE 435
                  +   A++   +M     EPD  TYN +IDG CK   VQ+A ++        F+
Sbjct: 268 DRAVRNSRVVEAEEYLRKMVNGGFEPDDLTYNSIIDGYCKKGMVQDANRVLKDAVFKGFK 327

Query: 436 FGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDF 495
                +  LI+G CK G  D A  +F     KGL P++V Y+ +I GL ++G +  A   
Sbjct: 328 PDEFTYCSLINGFCKDGDPDRAMAVFKDGLGKGLRPSIVLYNTLIKGLSQQGLILPALQL 387

Query: 496 LLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLL 555
           +  M +NGC PN+ T+N +++G  +    S    L+       +   PD  T++ ++D  
Sbjct: 388 MNEMAENGCLPNIWTYNLVINGLCKMGCVSDASHLVDDAI--AKGCPPDIFTYNTLIDGY 445

Query: 556 AKDEK 560
            K  K
Sbjct: 446 CKQLK 450



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 100/395 (25%), Positives = 173/395 (43%), Gaps = 52/395 (13%)

Query: 211 KAKELFLEMKGR-GINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVM 269
           KA E+F   K   G          ++      G +EE+  L  EM +     N L     
Sbjct: 22  KALEMFNSAKSEDGFKHTASTYKCIVQKLGHHGEFEEMEKLLSEMRE--NVNNALLEGAY 79

Query: 270 IDCL---CKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHS 326
           I+ +    + GK+ EA    E M     +P   ++N++M+     G  + A ++++ M  
Sbjct: 80  IEAMKNYGRKGKVQEAVDTFERMDFYNCDPSVHSHNAIMNILVEFGYHNQAHKVYMRMRD 139

Query: 327 KGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGY 386
           +G +  V +Y I I  +CK      A+ L R +   G     + Y T+++GL+ +G+  +
Sbjct: 140 RGVQSDVYTYTIRIKSFCKTARPYAALRLLRNMPELGCDSNAVAYCTVVAGLYDSGEHDH 199

Query: 387 AQKLFDEM-------------KLYNVE----------------------PDLSTYNILID 411
           A++LFDEM             KL +V                       P+L T+NI + 
Sbjct: 200 ARELFDEMLARCLCPDVVAFNKLVHVLCKKGLVFESERLLGKVLKRGVCPNLFTFNIFVQ 259

Query: 412 GLCKNNCVQEAVKLFHMLEMNK---------FEFGIEIFNCLIDGLCKAGRLDNAWELFH 462
           GLC+   +  AV+   ++E  +         FE     +N +IDG CK G + +A  +  
Sbjct: 260 GLCREGALDRAVRNSRVVEAEEYLRKMVNGGFEPDDLTYNSIIDGYCKKGMVQDANRVLK 319

Query: 463 KLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNN 522
               KG  P   TY  +I+G C+ G  ++A          G  P++V +NTL+ G  Q  
Sbjct: 320 DAVFKGFKPDEFTYCSLINGFCKDGDPDRAMAVFKDGLGKGLRPSIVLYNTLIKGLSQQG 379

Query: 523 KTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAK 557
                ++L+++MA  E   +P+  T+++V++ L K
Sbjct: 380 LILPALQLMNEMA--ENGCLPNIWTYNLVINGLCK 412



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 61/246 (24%), Positives = 116/246 (47%), Gaps = 11/246 (4%)

Query: 335 SYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEM 394
           +Y   +  Y +   V+EA+  + ++       +V ++N +++ L + G    A K++  M
Sbjct: 78  AYIEAMKNYGRKGKVQEAVDTFERMDFYNCDPSVHSHNAIMNILVEFGYHNQAHKVYMRM 137

Query: 395 KLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRL 454
           +   V+ D+ TY I I   CK      A++L   +     +     +  ++ GL  +G  
Sbjct: 138 RDRGVQSDVYTYTIRIKSFCKTARPYAALRLLRNMPELGCDSNAVAYCTVVAGLYDSGEH 197

Query: 455 DNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTL 514
           D+A ELF ++  + L P VV ++ ++H LC+KG + ++   L  + K G  PN+ TFN  
Sbjct: 198 DHARELFDEMLARCLCPDVVAFNKLVHVLCKKGLVFESERLLGKVLKRGVCPNLFTFNIF 257

Query: 515 MHGF---------LQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECS 565
           + G          ++N++  +  E L KM        PDD T++ ++D   K     + +
Sbjct: 258 VQGLCREGALDRAVRNSRVVEAEEYLRKMVNG--GFEPDDLTYNSIIDGYCKKGMVQDAN 315

Query: 566 AVSKSS 571
            V K +
Sbjct: 316 RVLKDA 321


>gi|413920484|gb|AFW60416.1| hypothetical protein ZEAMMB73_230014 [Zea mays]
          Length = 700

 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 149/541 (27%), Positives = 267/541 (49%), Gaps = 22/541 (4%)

Query: 58  EARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL-VSIGLLP-DFLTLNI 115
           + R  FG +      P   ++N +  A       D  ++  R++  S G  P D  + N+
Sbjct: 140 DVRAAFGLLVAAGARPDTFAWNKVVQACVAAGDLDVALAMVRRMGRSEGAPPPDAFSYNV 199

Query: 116 LINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLH 175
           +I        GL    +  +A  +F  M+  GV P+ ITY T+I+G  + G+L    RL 
Sbjct: 200 VIA-------GLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRLR 252

Query: 176 KKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLI 235
            +M+     +G   K NI +Y++++  LC+ G +D+ + L  EM    + P     + L 
Sbjct: 253 DQML----HDG--PKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILF 306

Query: 236 HGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLN 295
            G    G    +  LF E L  G      T +++++ LCK GK+ +A  +LE+++  GL 
Sbjct: 307 DGLTRTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLV 366

Query: 296 PDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSL 355
           P    YN+L++GYC V  +  A  IF  M S+  +   ++YN LING CK+  V +A  L
Sbjct: 367 PTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDL 426

Query: 356 YRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCK 415
             ++  +GV  +V T+NTL+     AGQ      +  +M+   ++ D+ ++  ++   CK
Sbjct: 427 VMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCK 486

Query: 416 NNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVT 475
           N  + EAV +   +         +++N +ID   ++G  + A+ L  K+   G+  ++VT
Sbjct: 487 NGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVT 546

Query: 476 YSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMA 535
           Y++++ GLCR  ++++A + +  +   G  P+VV++NT++        T K +ELL +M 
Sbjct: 547 YNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMN 606

Query: 536 EPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKSSYRACLYVTIFQPSSL-GSMIGCTV 594
             +  + P   T+  +V  LA   + H+   +    Y+  L+  +   SS+ G M+   V
Sbjct: 607 --KYGIRPTLRTYHTLVSALASAGRVHDMECL----YQQMLHKNVEPSSSIYGIMVDAYV 660

Query: 595 R 595
           R
Sbjct: 661 R 661



 Score =  214 bits (546), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 128/428 (29%), Positives = 214/428 (50%), Gaps = 11/428 (2%)

Query: 107 LPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTG 166
           LP   + N+L+         L    R  +    F  ++A G RPD   +  ++      G
Sbjct: 119 LPSLSSCNLLLE-------SLLFVGRHADVRAAFGLLVAAGARPDTFAWNKVVQACVAAG 171

Query: 167 NLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINP 226
           +L VAL + ++M  G  E       + FSY+++I  L + G    A ++F EM   G+ P
Sbjct: 172 DLDVALAMVRRM--GRSEGA--PPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVP 227

Query: 227 AVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLL 286
             +   T+I G    G+ E    L  +ML  GP+PN++T+NV++  LC+ G+++E   L+
Sbjct: 228 NWITYNTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLM 287

Query: 287 ELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKI 346
           + M    + PD FTY+ L DG    G   T   +F     KG      + +IL+NG CK 
Sbjct: 288 DEMASHSMFPDGFTYSILFDGLTRTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKD 347

Query: 347 LNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTY 406
             V +A  +   ++  G+  T + YNTL++G  Q      A  +F++MK  ++ PD  TY
Sbjct: 348 GKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITY 407

Query: 407 NILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQ 466
           N LI+GLCK   V +A  L   +E +  +  +E FN LID    AG+L+  + +   + Q
Sbjct: 408 NALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQ 467

Query: 467 KGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSK 526
           KG+   V+++  ++   C+ GK+ +A   L  M     APN   +N+++  ++++  T +
Sbjct: 468 KGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQ 527

Query: 527 VVELLHKM 534
              L+ KM
Sbjct: 528 AFLLVEKM 535



 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 128/493 (25%), Positives = 235/493 (47%), Gaps = 15/493 (3%)

Query: 57  NEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNIL 116
           ++A   F  M  M   P   ++N +     K    +A      +++  G  P+ +T N+L
Sbjct: 211 SDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNIVTYNVL 270

Query: 117 INCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHK 176
           ++       GLC   R+ E   L   M +  + PD  TY  L +G  RTG     L L  
Sbjct: 271 LS-------GLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRTGESRTMLSLFA 323

Query: 177 KMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIH 236
           + +    + G++     ++ SI+++ LCK+G V KA+++   +   G+ P  V+  TLI+
Sbjct: 324 ESL----KKGVM--LGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLIN 377

Query: 237 GFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNP 296
           G+C   +      +F +M     RP+ +T+N +I+ LCK   + +A  L+  M + G++P
Sbjct: 378 GYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDP 437

Query: 297 DRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLY 356
              T+N+L+D Y   G+++    +   M  KG K  V+S+  ++  +CK   + EA+++ 
Sbjct: 438 SVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAIL 497

Query: 357 RQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKN 416
             +I   V      YN+++    ++G    A  L ++MK   V   + TYN+L+ GLC++
Sbjct: 498 DDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRS 557

Query: 417 NCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTY 476
           + + EA +L + L        +  +N +I   C  G  D A EL  ++ + G+ PT+ TY
Sbjct: 558 SQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTY 617

Query: 477 SIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAE 536
             ++  L   G++         M      P+   +  ++  +++    SKV  L  +M+ 
Sbjct: 618 HTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEMS- 676

Query: 537 PERNLVPDDTTFS 549
            E+ +  DDT  S
Sbjct: 677 -EKGIAFDDTKRS 688



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 112/429 (26%), Positives = 212/429 (49%), Gaps = 15/429 (3%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
           N  L   C++G   ++E R     M      P   ++++LF  + +      ++S + + 
Sbjct: 268 NVLLSGLCRAG--RMDETRVLMDEMASHSMFPDGFTYSILFDGLTRTGESRTMLSLFAES 325

Query: 102 VSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLING 161
           +  G++    T +IL+N       GLC + ++ +A  + + ++  G+ P  + Y TLING
Sbjct: 326 LKKGVMLGAYTCSILLN-------GLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLING 378

Query: 162 FCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKG 221
           +C+  +L  A  + ++M S         + +  +Y+ +I+ LCK  +V KA++L +EM+ 
Sbjct: 379 YCQVRDLRGAFCIFEQMKSRHI------RPDHITYNALINGLCKLEMVTKAEDLVMEMEK 432

Query: 222 RGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINE 281
            G++P+V    TLI  +  AG  E+   +  +M   G + ++++F  ++   CK GKI E
Sbjct: 433 SGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPE 492

Query: 282 ANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILIN 341
           A  +L+ MI + + P+   YNS++D Y   G  + A  +   M + G   ++V+YN+L+ 
Sbjct: 493 AVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLK 552

Query: 342 GYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEP 401
           G C+   ++EA  L   + + G+R  V++YNT++S     G    A +L  EM  Y + P
Sbjct: 553 GLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRP 612

Query: 402 DLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELF 461
            L TY+ L+  L     V +   L+  +     E    I+  ++D   +         L 
Sbjct: 613 TLRTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASLK 672

Query: 462 HKLPQKGLV 470
            ++ +KG+ 
Sbjct: 673 KEMSEKGIA 681



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 97/381 (25%), Positives = 166/381 (43%), Gaps = 74/381 (19%)

Query: 259 PRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDT-- 316
           P P+L + N++++ L   G+  +      L++  G  PD F +N ++      G +D   
Sbjct: 118 PLPSLSSCNLLLESLLFVGRHADVRAAFGLLVAAGARPDTFAWNKVVQACVAAGDLDVAL 177

Query: 317 -----------------------------------AREIFLSMHSKGCKHTVVSYNILIN 341
                                              A ++F  M   G     ++YN +I+
Sbjct: 178 AMVRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMID 237

Query: 342 GYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEP 401
           G+ K  ++E    L  Q++ +G +  ++TYN LLSGL +AG+    + L DEM  +++ P
Sbjct: 238 GHVKGGDLEAGFRLRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFP 297

Query: 402 DLSTYNILID-----------------------------------GLCKNNCVQEAVKLF 426
           D  TY+IL D                                   GLCK+  V +A ++ 
Sbjct: 298 DGFTYSILFDGLTRTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVL 357

Query: 427 HMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRK 486
            ML          I+N LI+G C+   L  A+ +F ++  + + P  +TY+ +I+GLC+ 
Sbjct: 358 EMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKL 417

Query: 487 GKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDT 546
             + KA D ++ MEK+G  P+V TFNTL+  +    +  K   +L  M   ++ +  D  
Sbjct: 418 EMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQ--QKGIKSDVI 475

Query: 547 TFSIVVDLLAKDEKYHECSAV 567
           +F  VV    K+ K  E  A+
Sbjct: 476 SFGSVVKAFCKNGKIPEAVAI 496


>gi|357115900|ref|XP_003559723.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g19290-like, partial [Brachypodium distachyon]
          Length = 907

 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 151/515 (29%), Positives = 254/515 (49%), Gaps = 18/515 (3%)

Query: 55  NLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLN 114
            L +A Y F  M        + S N L   + +       ++ ++++   G LPD  T+ 
Sbjct: 109 QLKDALYVFDEMGKAGSRRTLRSCNRLLNQLVQAGDIGTAVAVFQQMRCAGTLPDDFTVA 168

Query: 115 ILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALR- 173
           I+   +       C + R+  A    K M   G+  +++ Y  +++G+CR G   VA + 
Sbjct: 169 IMAKAY-------CRDGRVAHAADFLKEMEEMGLDVNLVAYHAVMDGYCRIGQTEVARKL 221

Query: 174 LHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMK-GRGINPAVVVCT 232
           LH   V G          N+ +Y++++   CKEG +++A+++  E+K    I    V   
Sbjct: 222 LHSLQVKG-------LSPNVVTYTLLVKGYCKEGRMEEAEKVVKEIKENEKIVIDEVAYG 274

Query: 233 TLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQR 292
            LI+G+C  G  E+ N +  EM+D G + N+  +N MI+  CK G++ E   LL+    R
Sbjct: 275 ALINGYCQRGRMEDANRVRDEMIDAGVQVNMFVYNTMINGYCKLGRMGEVEKLLQANEYR 334

Query: 293 GLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEA 352
           G+N D ++YN+L+DGYC  G +  A E    M   G   T ++YN L+NG+C    +++A
Sbjct: 335 GVNLDEYSYNTLVDGYCRKGFMTKAFETCDMMVRNGFTGTTLTYNTLLNGFCSRGAIDDA 394

Query: 353 MSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDG 412
           + L+  ++  GV    I+ +TLL G F+AG+   A  L+ E     +  ++ T N +I+G
Sbjct: 395 LKLWFLMLKRGVVPNEISCSTLLDGFFKAGKTEQALNLWKETLARGLARNVVTINTVING 454

Query: 413 LCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPT 472
           LCKN  + EA +LFH ++          +  LIDG CK G L  A ++  ++   G VP+
Sbjct: 455 LCKNRRMTEAEELFHRMKEWSCPCDSLTYRTLIDGYCKLGDLGRATQIRIEMENLGFVPS 514

Query: 473 VVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLH 532
           V  ++  I GL    +  K ND  + M   G +PN VT+  L+ G+ +         L  
Sbjct: 515 VEMFNSFITGLFIAKQSGKVNDIRVEMSAKGLSPNTVTYGALIAGWCKEGNLHDACILYF 574

Query: 533 KMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAV 567
           +M   E+ L P+    S++V    ++ K  E + V
Sbjct: 575 EMV--EKGLKPNLFICSVLVSCFYREGKVDEANLV 607



 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 152/494 (30%), Positives = 249/494 (50%), Gaps = 26/494 (5%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
           N  L+  C  G I+     +F      + P+  IS   LL G     +   A ++ +++ 
Sbjct: 379 NTLLNGFCSRGAIDDALKLWFLMLKRGVVPNE-ISCSTLLDGFFKAGKTEQA-LNLWKET 436

Query: 102 VSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLING 161
           ++ GL  + +T+N +IN       GLC   R+ EA  LF  M  +    D +TY TLI+G
Sbjct: 437 LARGLARNVVTINTVIN-------GLCKNRRMTEAEELFHRMKEWSCPCDSLTYRTLIDG 489

Query: 162 FCRTGNLSVALRLHKKMVSGDYEN-GLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMK 220
           +C+ G+L  A ++  +M     EN G +    +F+  I    + K+    K  ++ +EM 
Sbjct: 490 YCKLGDLGRATQIRIEM-----ENLGFVPSVEMFNSFITGLFIAKQS--GKVNDIRVEMS 542

Query: 221 GRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKIN 280
            +G++P  V    LI G+C  GN  +   L+ EM++ G +PNL   +V++ C  + GK++
Sbjct: 543 AKGLSPNTVTYGALIAGWCKEGNLHDACILYFEMVEKGLKPNLFICSVLVSCFYREGKVD 602

Query: 281 EANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILI 340
           EAN    L++Q+  + D      + D       I     I  S+     +   + +NI+I
Sbjct: 603 EAN----LVLQKLADTDM-----IQDCSASTLNIGKVAHIIESLAGGNHQSAKIMWNIVI 653

Query: 341 NGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVE 400
            G CK+  V +A +L+  +   G      TY++L+ G   +G    A  L DEM    + 
Sbjct: 654 LGLCKLGRVADARNLFEDLKVKGFIPDNFTYSSLIHGCSASGSIDLAFGLRDEMLSARLT 713

Query: 401 PDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWEL 460
           P++ TYN LI GLCK+  V  AV LF+ L+          +N LIDG CK G    A++L
Sbjct: 714 PNIVTYNSLIYGLCKSCNVSRAVSLFNKLQSKGISPNAITYNTLIDGHCKDGNTTEAFKL 773

Query: 461 FHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQ 520
             K+ ++G+ PTV TY+I+IHGLC +G +E+A   L  M +N   PN +T+ TL+ G+ +
Sbjct: 774 KQKMIKEGIQPTVFTYTILIHGLCTQGYMEEAIKLLDQMIENNVDPNFITYWTLIQGYAR 833

Query: 521 NNKTSKVVELLHKM 534
                 + +L ++M
Sbjct: 834 CGNMKAITKLYNEM 847



 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 104/370 (28%), Positives = 184/370 (49%), Gaps = 3/370 (0%)

Query: 195 SYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEM 254
           S+ +++ +    G +  A  +F EM   G    +  C  L++    AG+      +F +M
Sbjct: 96  SFDLLLRAHADAGQLKDALYVFDEMGKAGSRRTLRSCNRLLNQLVQAGDIGTAVAVFQQM 155

Query: 255 LDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRI 314
              G  P+  T  +M    C+ G++  A   L+ M + GL+ +   Y+++MDGYC +G+ 
Sbjct: 156 RCAGTLPDDFTVAIMAKAYCRDGRVAHAADFLKEMEEMGLDVNLVAYHAVMDGYCRIGQT 215

Query: 315 DTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISN-GVRQTVITYNT 373
           + AR++  S+  KG    VV+Y +L+ GYCK   +EEA  + ++I  N  +    + Y  
Sbjct: 216 EVARKLLHSLQVKGLSPNVVTYTLLVKGYCKEGRMEEAEKVVKEIKENEKIVIDEVAYGA 275

Query: 374 LLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNK 433
           L++G  Q G+   A ++ DEM    V+ ++  YN +I+G CK   + E  KL    E   
Sbjct: 276 LINGYCQRGRMEDANRVRDEMIDAGVQVNMFVYNTMINGYCKLGRMGEVEKLLQANEYRG 335

Query: 434 FEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKAN 493
                  +N L+DG C+ G +  A+E    + + G   T +TY+ +++G C +G ++ A 
Sbjct: 336 VNLDEYSYNTLVDGYCRKGFMTKAFETCDMMVRNGFTGTTLTYNTLLNGFCSRGAIDDAL 395

Query: 494 DFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
                M K G  PN ++ +TL+ GF +  KT + + L  +     R L  +  T + V++
Sbjct: 396 KLWFLMLKRGVVPNEISCSTLLDGFFKAGKTEQALNLWKETL--ARGLARNVVTINTVIN 453

Query: 554 LLAKDEKYHE 563
            L K+ +  E
Sbjct: 454 GLCKNRRMTE 463



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 108/401 (26%), Positives = 200/401 (49%), Gaps = 9/401 (2%)

Query: 154 TYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAK 213
           ++  L+      G L  AL +  +M          S+  + S + +++ L + G +  A 
Sbjct: 96  SFDLLLRAHADAGQLKDALYVFDEMGKAG------SRRTLRSCNRLLNQLVQAGDIGTAV 149

Query: 214 ELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCL 273
            +F +M+  G  P       +   +C  G          EM ++G   NL+ ++ ++D  
Sbjct: 150 AVFQQMRCAGTLPDDFTVAIMAKAYCRDGRVAHAADFLKEMEEMGLDVNLVAYHAVMDGY 209

Query: 274 CKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSM-HSKGCKHT 332
           C+ G+   A  LL  +  +GL+P+  TY  L+ GYC  GR++ A ++   +  ++     
Sbjct: 210 CRIGQTEVARKLLHSLQVKGLSPNVVTYTLLVKGYCKEGRMEEAEKVVKEIKENEKIVID 269

Query: 333 VVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFD 392
            V+Y  LINGYC+   +E+A  +  ++I  GV+  +  YNT+++G  + G+ G  +KL  
Sbjct: 270 EVAYGALINGYCQRGRMEDANRVRDEMIDAGVQVNMFVYNTMINGYCKLGRMGEVEKLLQ 329

Query: 393 EMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAG 452
             +   V  D  +YN L+DG C+   + +A +   M+  N F      +N L++G C  G
Sbjct: 330 ANEYRGVNLDEYSYNTLVDGYCRKGFMTKAFETCDMMVRNGFTGTTLTYNTLLNGFCSRG 389

Query: 453 RLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFN 512
            +D+A +L+  + ++G+VP  ++ S ++ G  + GK E+A +        G A NVVT N
Sbjct: 390 AIDDALKLWFLMLKRGVVPNEISCSTLLDGFFKAGKTEQALNLWKETLARGLARNVVTIN 449

Query: 513 TLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
           T+++G  +N + ++  EL H+M   E +   D  T+  ++D
Sbjct: 450 TVINGLCKNRRMTEAEELFHRM--KEWSCPCDSLTYRTLID 488



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 124/523 (23%), Positives = 236/523 (45%), Gaps = 69/523 (13%)

Query: 120 FGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMV 179
           +G    G C   R+++A  +   MI  GV+ ++  Y T+ING+C+ G +     + K + 
Sbjct: 273 YGALINGYCQRGRMEDANRVRDEMIDAGVQVNMFVYNTMINGYCKLGRMG---EVEKLLQ 329

Query: 180 SGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFC 239
           + +Y    + +   +SY+ ++D  C++G + KA E    M   G     +   TL++GFC
Sbjct: 330 ANEYRGVNLDE---YSYNTLVDGYCRKGFMTKAFETCDMMVRNGFTGTTLTYNTLLNGFC 386

Query: 240 CAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRF 299
             G  ++   L+  ML  G  PN ++ + ++D   K GK  +A  L +  + RGL  +  
Sbjct: 387 SRGAIDDALKLWFLMLKRGVVPNEISCSTLLDGFFKAGKTEQALNLWKETLARGLARNVV 446

Query: 300 TYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQI 359
           T N++++G C   R+  A E+F  M    C    ++Y  LI+GYCK+ ++  A  +  ++
Sbjct: 447 TINTVINGLCKNRRMTEAEELFHRMKEWSCPCDSLTYRTLIDGYCKLGDLGRATQIRIEM 506

Query: 360 ISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCV 419
            + G   +V  +N+ ++GLF A Q+G    +  EM    + P+  TY  LI G CK   +
Sbjct: 507 ENLGFVPSVEMFNSFITGLFIAKQSGKVNDIRVEMSAKGLSPNTVTYGALIAGWCKEGNL 566

Query: 420 QEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLV--------- 470
            +A  L+  +     +  + I + L+    + G++D A  +  KL    ++         
Sbjct: 567 HDACILYFEMVEKGLKPNLFICSVLVSCFYREGKVDEANLVLQKLADTDMIQDCSASTLN 626

Query: 471 -----------------PTVVTYSIMIHGLCRKGKLEKA--------------NDFLLYM 499
                               + ++I+I GLC+ G++  A              ++F    
Sbjct: 627 IGKVAHIIESLAGGNHQSAKIMWNIVILGLCKLGRVADARNLFEDLKVKGFIPDNFTYSS 686

Query: 500 EKNGCA---------------------PNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPE 538
             +GC+                     PN+VT+N+L++G  ++   S+ V L +K+    
Sbjct: 687 LIHGCSASGSIDLAFGLRDEMLSARLTPNIVTYNSLIYGLCKSCNVSRAVSLFNKL--QS 744

Query: 539 RNLVPDDTTFSIVVDLLAKDEKYHECSAVSKSSYRACLYVTIF 581
           + + P+  T++ ++D   KD    E   + +   +  +  T+F
Sbjct: 745 KGISPNAITYNTLIDGHCKDGNTTEAFKLKQKMIKEGIQPTVF 787



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 108/373 (28%), Positives = 176/373 (47%), Gaps = 29/373 (7%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CK G  +L  A      M ++   P +  FN     +   +    V     ++ + GL P
Sbjct: 491 CKLG--DLGRATQIRIEMENLGFVPSVEMFNSFITGLFIAKQSGKVNDIRVEMSAKGLSP 548

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           + +T   LI        G C E  + +A  L+  M+  G++P++     L++ F R G +
Sbjct: 549 NTVTYGALI-------AGWCKEGNLHDACILYFEMVEKGLKPNLFICSVLVSCFYREGKV 601

Query: 169 SVALRLHKKMVSGDY-ENGLISKTNI-------------------FSYSIIIDSLCKEGL 208
             A  + +K+   D  ++   S  NI                     ++I+I  LCK G 
Sbjct: 602 DEANLVLQKLADTDMIQDCSASTLNIGKVAHIIESLAGGNHQSAKIMWNIVILGLCKLGR 661

Query: 209 VDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNV 268
           V  A+ LF ++K +G  P     ++LIHG   +G+ +   GL  EML     PN++T+N 
Sbjct: 662 VADARNLFEDLKVKGFIPDNFTYSSLIHGCSASGSIDLAFGLRDEMLSARLTPNIVTYNS 721

Query: 269 MIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKG 328
           +I  LCK   ++ A  L   +  +G++P+  TYN+L+DG+C  G    A ++   M  +G
Sbjct: 722 LIYGLCKSCNVSRAVSLFNKLQSKGISPNAITYNTLIDGHCKDGNTTEAFKLKQKMIKEG 781

Query: 329 CKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQ 388
            + TV +Y ILI+G C    +EEA+ L  Q+I N V    ITY TL+ G  + G      
Sbjct: 782 IQPTVFTYTILIHGLCTQGYMEEAIKLLDQMIENNVDPNFITYWTLIQGYARCGNMKAIT 841

Query: 389 KLFDEMKLYNVEP 401
           KL++EM +  + P
Sbjct: 842 KLYNEMHICGLLP 854



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 52/206 (25%), Positives = 109/206 (52%), Gaps = 1/206 (0%)

Query: 332 TVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLF 391
           +  S+++L+  +     +++A+ ++ ++   G R+T+ + N LL+ L QAG  G A  +F
Sbjct: 93  SAASFDLLLRAHADAGQLKDALYVFDEMGKAGSRRTLRSCNRLLNQLVQAGDIGTAVAVF 152

Query: 392 DEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKA 451
            +M+     PD  T  I+    C++  V  A      +E    +  +  ++ ++DG C+ 
Sbjct: 153 QQMRCAGTLPDDFTVAIMAKAYCRDGRVAHAADFLKEMEEMGLDVNLVAYHAVMDGYCRI 212

Query: 452 GRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKN-GCAPNVVT 510
           G+ + A +L H L  KGL P VVTY++++ G C++G++E+A   +  +++N     + V 
Sbjct: 213 GQTEVARKLLHSLQVKGLSPNVVTYTLLVKGYCKEGRMEEAEKVVKEIKENEKIVIDEVA 272

Query: 511 FNTLMHGFLQNNKTSKVVELLHKMAE 536
           +  L++G+ Q  +      +  +M +
Sbjct: 273 YGALINGYCQRGRMEDANRVRDEMID 298


>gi|125544564|gb|EAY90703.1| hypothetical protein OsI_12306 [Oryza sativa Indica Group]
          Length = 644

 Score =  234 bits (596), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 138/456 (30%), Positives = 226/456 (49%), Gaps = 13/456 (2%)

Query: 79  NLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATW 138
           NL+  A+ +    D  +   RKL   G   D ++ N ++       +GLC+  R  +   
Sbjct: 185 NLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVL-------KGLCMAKRWGDVEE 237

Query: 139 LFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSI 198
           L   M+     P+++T+ TLI   CR G      R+H+ +     E+G     +I  Y+ 
Sbjct: 238 LMDEMVRVDCAPNIVTFNTLIGYLCRNGLFE---RVHEVLAQMS-EHG--CTPDIRMYAT 291

Query: 199 IIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLG 258
           IID +CKEG ++ A E+   M   G+ P VV   T++ G C A  W+E   L  EM    
Sbjct: 292 IIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKD 351

Query: 259 PRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAR 318
              + +TFN+++D  C+ G ++    LLE M+  G  PD  TY ++++G+C  G ID A 
Sbjct: 352 CPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAV 411

Query: 319 EIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGL 378
            +  SM S GCK   VSY I++ G C      +A  L  Q+I  G     +T+NTL++ L
Sbjct: 412 MLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFL 471

Query: 379 FQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGI 438
            + G    A +L  +M +    PDL +Y+ +IDGL K    +EA++L +++         
Sbjct: 472 CKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNT 531

Query: 439 EIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLY 498
            I++ +   L + GR++   ++F  +    +    V Y+ +I  LC++ + ++A DF  Y
Sbjct: 532 IIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAY 591

Query: 499 MEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKM 534
           M  NGC PN  T+  L+ G        +  ELL ++
Sbjct: 592 MVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSEL 627



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 112/403 (27%), Positives = 193/403 (47%), Gaps = 13/403 (3%)

Query: 66  MTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKER 125
           M  +  +P I +FN L G + +N  ++ V     ++   G  PD      +I+       
Sbjct: 242 MVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIID------- 294

Query: 126 GLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYEN 185
           G+C E  ++ A  +   M ++G++P+V+ Y T++ G C       A  L  +M   D   
Sbjct: 295 GICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKD--- 351

Query: 186 GLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWE 245
                 +  +++I++D  C+ GLVD+  EL  +M   G  P V+  TT+I+GFC  G  +
Sbjct: 352 ---CPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLID 408

Query: 246 EVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLM 305
           E   L   M   G +PN +++ +++  LC  G+  +A  L+  MIQ+G  P+  T+N+L+
Sbjct: 409 EAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLI 468

Query: 306 DGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVR 365
           +  C  G ++ A E+   M   GC   ++SY+ +I+G  K    EEA+ L   +++ G+ 
Sbjct: 469 NFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGIS 528

Query: 366 QTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKL 425
              I Y+++   L + G+     ++FD +K   +  D   YN +I  LCK      A+  
Sbjct: 529 PNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDF 588

Query: 426 FHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKG 468
           F  +  N        +  LI GL   G    A EL  +L  +G
Sbjct: 589 FAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRG 631



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 123/468 (26%), Positives = 214/468 (45%), Gaps = 43/468 (9%)

Query: 125 RGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYE 184
           RGLC   RI +A  +   M   G  P    Y  ++   CR+G    ++R+ + M    + 
Sbjct: 119 RGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAM----HA 174

Query: 185 NGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNW 244
            G    T   + +++++++C++G VD+A  L  ++   G    +V    ++ G C A  W
Sbjct: 175 KGCTLDTG--NCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRW 232

Query: 245 EEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSL 304
            +V  L  EM+ +   PN++TFN +I  LC+ G     + +L  M + G  PD   Y ++
Sbjct: 233 GDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATI 292

Query: 305 MDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGV 364
           +DG C  G ++ A EI   M S G K  VV YN ++ G C     +EA  L  ++     
Sbjct: 293 IDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDC 352

Query: 365 RQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVK 424
               +T+N L+    Q G      +L ++M  +   PD+ TY  +I+G CK   + EAV 
Sbjct: 353 PLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVM 412

Query: 425 LFHML-----EMNKFEFGIEI------------------------------FNCLIDGLC 449
           L   +     + N   + I +                              FN LI+ LC
Sbjct: 413 LLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLC 472

Query: 450 KAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVV 509
           K G ++ A EL  ++   G  P +++YS +I GL + GK E+A + L  M   G +PN +
Sbjct: 473 KKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTI 532

Query: 510 TFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAK 557
            ++++     +  + +KV+++   +   +  +  D   ++ V+  L K
Sbjct: 533 IYSSIACALSREGRVNKVIQMFDNIK--DTTIRSDAVLYNAVISSLCK 578



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 111/416 (26%), Positives = 199/416 (47%), Gaps = 8/416 (1%)

Query: 148 VRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEG 207
           V P+  T+  ++ G C  G ++ AL +  +M       G      +  Y +I+++ C+ G
Sbjct: 107 VPPNAYTFFPVVRGLCTRGRIADALEVLDEMSF----KGCAPIPPM--YHVILEAACRSG 160

Query: 208 LVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFN 267
               +  +   M  +G       C  +++  C  G  +E  GL  ++   G   +++++N
Sbjct: 161 GFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYN 220

Query: 268 VMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSK 327
            ++  LC   +  +   L++ M++    P+  T+N+L+   C  G  +   E+   M   
Sbjct: 221 AVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEH 280

Query: 328 GCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYA 387
           GC   +  Y  +I+G CK  ++E A  +  ++ S G++  V+ YNT+L GL  A +   A
Sbjct: 281 GCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEA 340

Query: 388 QKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDG 447
           ++L  EM   +   D  T+NIL+D  C+N  V   ++L   +  +     +  +  +I+G
Sbjct: 341 EELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVING 400

Query: 448 LCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPN 507
            CK G +D A  L   +   G  P  V+Y+I++ GLC  G+   A + +  M + GC PN
Sbjct: 401 FCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPN 460

Query: 508 VVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
            VTFNTL++   +     + +ELL +M        PD  ++S V+D L K  K  E
Sbjct: 461 PVTFNTLINFLCKKGLVEQAIELLKQML--VNGCSPDLISYSTVIDGLGKAGKTEE 514


>gi|108709396|gb|ABF97191.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|215687193|dbj|BAG91758.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222625245|gb|EEE59377.1| hypothetical protein OsJ_11489 [Oryza sativa Japonica Group]
          Length = 644

 Score =  234 bits (596), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 138/456 (30%), Positives = 226/456 (49%), Gaps = 13/456 (2%)

Query: 79  NLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATW 138
           NL+  A+ +    D  +   RKL   G   D ++ N ++       +GLC+  R  +   
Sbjct: 185 NLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVL-------KGLCMAKRWGDVEE 237

Query: 139 LFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSI 198
           L   M+     P+++T+ TLI   CR G      R+H+ +     E+G     +I  Y+ 
Sbjct: 238 LMDEMVRVDCAPNIVTFNTLIGYLCRNGLFE---RVHEVLAQMS-EHG--CTPDIRMYAT 291

Query: 199 IIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLG 258
           IID +CKEG ++ A E+   M   G+ P VV   T++ G C A  W+E   L  EM    
Sbjct: 292 IIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKD 351

Query: 259 PRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAR 318
              + +TFN+++D  C+ G ++    LLE M+  G  PD  TY ++++G+C  G ID A 
Sbjct: 352 CPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAV 411

Query: 319 EIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGL 378
            +  SM S GCK   VSY I++ G C      +A  L  Q+I  G     +T+NTL++ L
Sbjct: 412 MLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFL 471

Query: 379 FQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGI 438
            + G    A +L  +M +    PDL +Y+ +IDGL K    +EA++L +++         
Sbjct: 472 CKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNT 531

Query: 439 EIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLY 498
            I++ +   L + GR++   ++F  +    +    V Y+ +I  LC++ + ++A DF  Y
Sbjct: 532 IIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAY 591

Query: 499 MEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKM 534
           M  NGC PN  T+  L+ G        +  ELL ++
Sbjct: 592 MVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSEL 627



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 112/403 (27%), Positives = 193/403 (47%), Gaps = 13/403 (3%)

Query: 66  MTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKER 125
           M  +  +P I +FN L G + +N  ++ V     ++   G  PD      +I+       
Sbjct: 242 MVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIID------- 294

Query: 126 GLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYEN 185
           G+C E  ++ A  +   M ++G++P+V+ Y T++ G C       A  L  +M   D   
Sbjct: 295 GICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKD--- 351

Query: 186 GLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWE 245
                 +  +++I++D  C+ GLVD+  EL  +M   G  P V+  TT+I+GFC  G  +
Sbjct: 352 ---CPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLID 408

Query: 246 EVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLM 305
           E   L   M   G +PN +++ +++  LC  G+  +A  L+  MIQ+G  P+  T+N+L+
Sbjct: 409 EAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLI 468

Query: 306 DGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVR 365
           +  C  G ++ A E+   M   GC   ++SY+ +I+G  K    EEA+ L   +++ G+ 
Sbjct: 469 NFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGIS 528

Query: 366 QTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKL 425
              I Y+++   L + G+     ++FD +K   +  D   YN +I  LCK      A+  
Sbjct: 529 PNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDF 588

Query: 426 FHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKG 468
           F  +  N        +  LI GL   G    A EL  +L  +G
Sbjct: 589 FAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRG 631



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 123/468 (26%), Positives = 214/468 (45%), Gaps = 43/468 (9%)

Query: 125 RGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYE 184
           RGLC   RI +A  +   M   G  P    Y  ++   CR+G    ++R+ + M    + 
Sbjct: 119 RGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAM----HA 174

Query: 185 NGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNW 244
            G    T   + +++++++C++G VD+A  L  ++   G    +V    ++ G C A  W
Sbjct: 175 KGCTLDTG--NCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRW 232

Query: 245 EEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSL 304
            +V  L  EM+ +   PN++TFN +I  LC+ G     + +L  M + G  PD   Y ++
Sbjct: 233 GDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATI 292

Query: 305 MDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGV 364
           +DG C  G ++ A EI   M S G K  VV YN ++ G C     +EA  L  ++     
Sbjct: 293 IDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDC 352

Query: 365 RQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVK 424
               +T+N L+    Q G      +L ++M  +   PD+ TY  +I+G CK   + EAV 
Sbjct: 353 PLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVM 412

Query: 425 LFHML-----EMNKFEFGIEI------------------------------FNCLIDGLC 449
           L   +     + N   + I +                              FN LI+ LC
Sbjct: 413 LLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLC 472

Query: 450 KAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVV 509
           K G ++ A EL  ++   G  P +++YS +I GL + GK E+A + L  M   G +PN +
Sbjct: 473 KKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTI 532

Query: 510 TFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAK 557
            ++++     +  + +KV+++   +   +  +  D   ++ V+  L K
Sbjct: 533 IYSSIACALSREGRVNKVIQMFDNIK--DTTIRSDAVLYNAVISSLCK 578



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 111/416 (26%), Positives = 199/416 (47%), Gaps = 8/416 (1%)

Query: 148 VRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEG 207
           V P+  T+  ++ G C  G ++ AL +  +M       G      +  Y +I+++ C+ G
Sbjct: 107 VPPNAYTFFPVVRGLCTRGRIADALEVLDEMSF----KGCAPIPPM--YHVILEAACRSG 160

Query: 208 LVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFN 267
               +  +   M  +G       C  +++  C  G  +E  GL  ++   G   +++++N
Sbjct: 161 GFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYN 220

Query: 268 VMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSK 327
            ++  LC   +  +   L++ M++    P+  T+N+L+   C  G  +   E+   M   
Sbjct: 221 AVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEH 280

Query: 328 GCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYA 387
           GC   +  Y  +I+G CK  ++E A  +  ++ S G++  V+ YNT+L GL  A +   A
Sbjct: 281 GCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEA 340

Query: 388 QKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDG 447
           ++L  EM   +   D  T+NIL+D  C+N  V   ++L   +  +     +  +  +I+G
Sbjct: 341 EELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVING 400

Query: 448 LCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPN 507
            CK G +D A  L   +   G  P  V+Y+I++ GLC  G+   A + +  M + GC PN
Sbjct: 401 FCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPN 460

Query: 508 VVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
            VTFNTL++   +     + +ELL +M        PD  ++S V+D L K  K  E
Sbjct: 461 PVTFNTLINFLCKKGLVEQAIELLKQML--VNGCSPDLISYSTVIDGLGKAGKTEE 514


>gi|302775294|ref|XP_002971064.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
 gi|300161046|gb|EFJ27662.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
          Length = 814

 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 152/524 (29%), Positives = 250/524 (47%), Gaps = 40/524 (7%)

Query: 72  SPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCF---GNKE---- 124
           +P   SFN+L  + A+ R  D  ++ +  +      PD  T  IL++C    G  E    
Sbjct: 151 APNTFSFNILIRSFARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFE 210

Query: 125 ----------------------RGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGF 162
                                 R L    R+KEA  +F  M   G  PD I Y T+I+G 
Sbjct: 211 VFHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGL 270

Query: 163 CRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGR 222
            + G+   AL++   M++          T + +Y I+++SLCK G +++A+ELF  M   
Sbjct: 271 AKAGHAQEALKVLDNMLA-----KACVPTEV-TYGILVNSLCKAGTLERAEELFRVMAAS 324

Query: 223 GINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEA 282
           G  P  V+ T+LIHGF  +G  +E   LF EM++ G RP+++T  VMID LCK G   +A
Sbjct: 325 GFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQA 384

Query: 283 NGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILING 342
               E M++ G  P+  TY +++ G   +GR+  A  I   M + GC    V+Y  L++G
Sbjct: 385 AKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDG 444

Query: 343 YCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYA-QKLFDEMKLYNVEP 401
           +CK+  ++EA  L  ++        +  Y++L++GL   G        LF++ K      
Sbjct: 445 FCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVNGLCDGGSVEKTLDDLFEQSKAAAETL 504

Query: 402 DLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKA--GRLDNAWE 459
           D      +I GLCK   + EA ++F  +     +     +N LI+GLC++   R++ A+ 
Sbjct: 505 DPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFA 564

Query: 460 LFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFL 519
           L H L + G +P  VTY+ +  GLC+ G++++A   L      G   +VV +  L  G  
Sbjct: 565 LLHDLEKVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLC 624

Query: 520 QNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
              +  + V L  +M    +   PD   +  +++ L K +K  +
Sbjct: 625 YQGQVDRAVSLFQEMV--RQGGAPDAAAYCCIINGLIKVKKLED 666



 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 144/496 (29%), Positives = 244/496 (49%), Gaps = 19/496 (3%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
              +H   KSG   + EA   F  M      P + +  ++   + K+ +++     + ++
Sbjct: 334 TSLIHGFAKSG--RMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEM 391

Query: 102 VSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLING 161
           +  G  P+ +T   +I       +GL    R+  A  + K MIA G  PD +TY  L++G
Sbjct: 392 MRGGCKPNVVTYTTII-------QGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDG 444

Query: 162 FCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKA-KELFLEMK 220
           FC+ G L  A +L  ++      +   S  N+  YS +++ LC  G V+K   +LF + K
Sbjct: 445 FCKLGRLDEAAQLLDEL------DKCSSSPNLQLYSSLVNGLCDGGSVEKTLDDLFEQSK 498

Query: 221 GRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKG--GK 278
                    +C ++I G C  G  +E   +F  M+  G +P+  T+N++I+ LC+    +
Sbjct: 499 AAAETLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENR 558

Query: 279 INEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNI 338
           +  A  LL  + + G  PD  TY  L  G C +G +D A ++     S+G    VV+Y  
Sbjct: 559 VERAFALLHDLEKVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTA 618

Query: 339 LINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYN 398
           L  G C    V+ A+SL+++++  G       Y  +++GL +  +   A K FDEM    
Sbjct: 619 LCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKVKKLEDACKFFDEMIGKG 678

Query: 399 VEPDLSTYNILIDGLCKNNCVQEAVKLFH-MLEMNKFEFGIEIFNCLIDGLCKAGRLDNA 457
            +P ++TY  L+  LC    V EA   F  ML   +    + I++ LI G CKA ++D A
Sbjct: 679 QKPTVATYTALVQALCHAGNVDEAFHRFESMLARGELVGSVMIYDALIHGFCKALKVDAA 738

Query: 458 WELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHG 517
            +LF  +  +G VPT VT + +  GL R GK EKA + L  M   G  P+  TF  ++ G
Sbjct: 739 LKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAATFTAILDG 798

Query: 518 FLQNNKTSKVVELLHK 533
             +++++ K+++L+ +
Sbjct: 799 LRKSDESGKLLKLVQE 814



 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 161/580 (27%), Positives = 254/580 (43%), Gaps = 89/580 (15%)

Query: 55  NLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLN 114
            + EAR  FG M      P   ++N +   +AK  H    +     +++   +P  +T  
Sbjct: 240 RVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYG 299

Query: 115 ILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRL 174
           IL+N        LC    ++ A  LF+ M A G RP+ + Y +LI+GF ++G +  A  L
Sbjct: 300 ILVN-------SLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSL 352

Query: 175 HKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTL 234
             +MV   Y      + ++ +++++ID LCK G  ++A + F EM   G  P VV  TT+
Sbjct: 353 FDEMVEAGY------RPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTI 406

Query: 235 IHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGL 294
           I G    G       +   M+  G  P+ +T+  ++D  CK G+++EA  LL+ + +   
Sbjct: 407 IQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSS 466

Query: 295 NPDRFTYNSLMDGYC------------------------------------LVGRIDTAR 318
           +P+   Y+SL++G C                                      GR+D A 
Sbjct: 467 SPNLQLYSSLVNGLCDGGSVEKTLDDLFEQSKAAAETLDPGLCCSIIVGLCKTGRLDEAC 526

Query: 319 EIFLSMHSKGCKHTVVSYNILINGYC---------------------------------- 344
            IF  M S+GCK    +YNILING C                                  
Sbjct: 527 RIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEKVGYLPDAVTYTPLCI 586

Query: 345 ---KILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEP 401
              KI  V+ A+ +  +  S G    V+ Y  L +GL   GQ   A  LF EM      P
Sbjct: 587 GLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAP 646

Query: 402 DLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELF 461
           D + Y  +I+GL K   +++A K F  +     +  +  +  L+  LC AG +D A+  F
Sbjct: 647 DAAAYCCIINGLIKVKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRF 706

Query: 462 HKLPQKG-LVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQ 520
             +  +G LV +V+ Y  +IHG C+  K++ A      M   G  P  VT  +L  G ++
Sbjct: 707 ESMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVR 766

Query: 521 NNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEK 560
           + KT K  ELL +MA       P   TF+ ++D L K ++
Sbjct: 767 SGKTEKAQELLQEMAAG--GSPPHAATFTAILDGLRKSDE 804



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 117/409 (28%), Positives = 198/409 (48%), Gaps = 7/409 (1%)

Query: 147 GVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKE 206
           G + DV TY  L+N      N S    +H++M+            N FS++I+I S  + 
Sbjct: 114 GFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGI------APNTFSFNILIRSFART 167

Query: 207 GLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLG-PRPNLLT 265
              D A   F  MK +   P +     L+   C AG  E+   +F EM+ +G   P+   
Sbjct: 168 RRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRAL 227

Query: 266 FNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMH 325
              M+  L K  ++ EA  +   M + G  PD   YN+++DG    G    A ++  +M 
Sbjct: 228 HTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNML 287

Query: 326 SKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAG 385
           +K C  T V+Y IL+N  CK   +E A  L+R + ++G R   + Y +L+ G  ++G+  
Sbjct: 288 AKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMK 347

Query: 386 YAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLI 445
            A  LFDEM      PD+ T+ ++IDGLCK+   ++A K F  +     +  +  +  +I
Sbjct: 348 EACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTII 407

Query: 446 DGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCA 505
            GL K GR+ NA+ +   +   G  P  VTY  ++ G C+ G+L++A   L  ++K   +
Sbjct: 408 QGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSS 467

Query: 506 PNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDL 554
           PN+  +++L++G        K ++ L + ++     +      SI+V L
Sbjct: 468 PNLQLYSSLVNGLCDGGSVEKTLDDLFEQSKAAAETLDPGLCCSIIVGL 516



 Score = 46.6 bits (109), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 30/139 (21%), Positives = 59/139 (42%), Gaps = 3/139 (2%)

Query: 430 EMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKL 489
           E   F+  +  +NCL++ L         + +  ++ + G+ P   +++I+I    R  + 
Sbjct: 111 EQAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRA 170

Query: 490 EKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTF- 548
           + A      M++  C P++ TF  L+    +     K  E+ H+M       VP D    
Sbjct: 171 DDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMM--AMGFVPPDRALH 228

Query: 549 SIVVDLLAKDEKYHECSAV 567
           + +V  L K ++  E   V
Sbjct: 229 TAMVRTLLKAKRVKEAREV 247


>gi|357499781|ref|XP_003620179.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495194|gb|AES76397.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 517

 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 133/416 (31%), Positives = 224/416 (53%), Gaps = 16/416 (3%)

Query: 131 NRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISK 190
           N + +A  LF  ++     P  I +  ++    ++ +    L L +KM       G+  K
Sbjct: 41  NDVDDAVSLFNRLLQQNPTPPNIEFNKILGSLVKSKHYHTVLYLSQKMEF----RGI--K 94

Query: 191 TNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFC----------C 240
            N+ + +I+I+S C+ G +  A  +  ++   G  P  +   TLI G C           
Sbjct: 95  PNLVNCNILINSFCQLGHIPSAFSVLTKILKMGYKPNTITLNTLIKGLCLNGKIHDKHCI 154

Query: 241 AGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFT 300
            G  ++   LF +M+     P++ TF +++D  CK G++ EA  +L +M+ +G+ P   T
Sbjct: 155 VGKLKDAVDLFNKMILENINPDVYTFTILVDGFCKEGRVKEAKNVLAMMMIQGIKPGVVT 214

Query: 301 YNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQII 360
           YNSLMDGY LV +++ A+ IF +M   G    + SY+ILING+CKI  ++EAM L +++ 
Sbjct: 215 YNSLMDGYFLVKQVNKAKSIFNTMAQLGVSPDIQSYSILINGFCKIKMMDEAMELLKEMH 274

Query: 361 SNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQ 420
              +   V+TY++L+ GL ++G+  YA KL DEM      P++ TY+ ++D LCKN+ V 
Sbjct: 275 HKQIIPNVVTYSSLIDGLCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKNHQVD 334

Query: 421 EAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMI 480
            A+ L   ++    +  +  +  LI GLC++G+L++A ++F  L  KG    V TY++MI
Sbjct: 335 NAIALLTQMKNQGIQPNMYTYTILIKGLCQSGKLEDARKVFEDLLVKGHNLNVYTYTVMI 394

Query: 481 HGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAE 536
            G C KG  ++A   L  ME NGC PN  T+  ++    + ++     +LL +M E
Sbjct: 395 QGFCDKGLFDEALTLLSKMEDNGCIPNAKTYEIIILSLFKKDENEMAEKLLCEMIE 450



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 126/455 (27%), Positives = 218/455 (47%), Gaps = 58/455 (12%)

Query: 55  NLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLN 114
           ++++A   F  +    P+PP   FN + G++ K++HY  V+   +K+   G+ P+ +  N
Sbjct: 42  DVDDAVSLFNRLLQQNPTPPNIEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCN 101

Query: 115 ILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCR---------- 164
           ILIN F       C    I  A  +   ++  G +P+ IT  TLI G C           
Sbjct: 102 ILINSF-------CQLGHIPSAFSVLTKILKMGYKPNTITLNTLIKGLCLNGKIHDKHCI 154

Query: 165 TGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGI 224
            G L  A+ L  KM+    EN      ++++++I++D  CKEG V +AK +   M  +GI
Sbjct: 155 VGKLKDAVDLFNKMI---LEN---INPDVYTFTILVDGFCKEGRVKEAKNVLAMMMIQGI 208

Query: 225 NPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANG 284
            P VV   +L+ G+       +   +F  M  LG  P++ +++++I+  CK   ++EA  
Sbjct: 209 KPGVVTYNSLMDGYFLVKQVNKAKSIFNTMAQLGVSPDIQSYSILINGFCKIKMMDEAME 268

Query: 285 LLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYC 344
           LL+ M  + + P+  TY+SL+DG C  G+I  A ++   MH +G    +V+Y+ +++  C
Sbjct: 269 LLKEMHHKQIIPNVVTYSSLIDGLCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALC 328

Query: 345 KILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLS 404
           K   V+ A++L  Q+ + G++  + TY  L+ GL Q+G+   A+K+F+++ +     ++ 
Sbjct: 329 KNHQVDNAIALLTQMKNQGIQPNMYTYTILIKGLCQSGKLEDARKVFEDLLVKGHNLNVY 388

Query: 405 TYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKL 464
           TY ++I G C                                     G  D A  L  K+
Sbjct: 389 TYTVMIQGFC-----------------------------------DKGLFDEALTLLSKM 413

Query: 465 PQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYM 499
              G +P   TY I+I  L +K + E A   L  M
Sbjct: 414 EDNGCIPNAKTYEIIILSLFKKDENEMAEKLLCEM 448



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 101/346 (29%), Positives = 176/346 (50%), Gaps = 25/346 (7%)

Query: 196 YSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEML 255
           ++ I+ SL K         L  +M+ RGI P +V C  LI+ FC  G+      +  ++L
Sbjct: 65  FNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNILINSFCQLGHIPSAFSVLTKIL 124

Query: 256 DLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRID 315
            +G +PN +T N +I  LC  GKI+                         D +C+VG++ 
Sbjct: 125 KMGYKPNTITLNTLIKGLCLNGKIH-------------------------DKHCIVGKLK 159

Query: 316 TAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLL 375
            A ++F  M  +     V ++ IL++G+CK   V+EA ++   ++  G++  V+TYN+L+
Sbjct: 160 DAVDLFNKMILENINPDVYTFTILVDGFCKEGRVKEAKNVLAMMMIQGIKPGVVTYNSLM 219

Query: 376 SGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFE 435
            G F   Q   A+ +F+ M    V PD+ +Y+ILI+G CK   + EA++L   +   +  
Sbjct: 220 DGYFLVKQVNKAKSIFNTMAQLGVSPDIQSYSILINGFCKIKMMDEAMELLKEMHHKQII 279

Query: 436 FGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDF 495
             +  ++ LIDGLCK+G++  A +L  ++  +G  P +VTYS ++  LC+  +++ A   
Sbjct: 280 PNVVTYSSLIDGLCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKNHQVDNAIAL 339

Query: 496 LLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNL 541
           L  M+  G  PN+ T+  L+ G  Q+ K     ++   +     NL
Sbjct: 340 LTQMKNQGIQPNMYTYTILIKGLCQSGKLEDARKVFEDLLVKGHNL 385



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 93/345 (26%), Positives = 161/345 (46%), Gaps = 16/345 (4%)

Query: 41  LNEFLHE-NCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYR 99
           LN  +H+ +C  G   L +A   F  M     +P + +F +L     K        +   
Sbjct: 144 LNGKIHDKHCIVG--KLKDAVDLFNKMILENINPDVYTFTILVDGFCKEGRVKEAKNVLA 201

Query: 100 KLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLI 159
            ++  G+ P  +T N L++       G  +  ++ +A  +F  M   GV PD+ +Y  LI
Sbjct: 202 MMMIQGIKPGVVTYNSLMD-------GYFLVKQVNKAKSIFNTMAQLGVSPDIQSYSILI 254

Query: 160 NGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEM 219
           NGFC+   +  A+ L K+M    +   +I   N+ +YS +ID LCK G +  A +L  EM
Sbjct: 255 NGFCKIKMMDEAMELLKEM----HHKQIIP--NVVTYSSLIDGLCKSGKISYALKLVDEM 308

Query: 220 KGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKI 279
             RG  P +V  ++++   C     +    L  +M + G +PN+ T+ ++I  LC+ GK+
Sbjct: 309 HDRGQPPNIVTYSSILDALCKNHQVDNAIALLTQMKNQGIQPNMYTYTILIKGLCQSGKL 368

Query: 280 NEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNIL 339
            +A  + E ++ +G N + +TY  ++ G+C  G  D A  +   M   GC     +Y I+
Sbjct: 369 EDARKVFEDLLVKGHNLNVYTYTVMIQGFCDKGLFDEALTLLSKMEDNGCIPNAKTYEII 428

Query: 340 INGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQA 384
           I    K    E A  L  ++I       V   N L++ ++  G +
Sbjct: 429 ILSLFKKDENEMAEKLLCEMIETNFDGRVALTNDLIASIWVTGSS 473


>gi|222636130|gb|EEE66262.1| hypothetical protein OsJ_22447 [Oryza sativa Japonica Group]
          Length = 876

 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 149/483 (30%), Positives = 239/483 (49%), Gaps = 20/483 (4%)

Query: 36  SPETQLNEFLHEN-CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAV 94
           SP  +   FL    CKSG   + +AR  F  M      P + ++N +    +K    +  
Sbjct: 170 SPNVRAFTFLISGLCKSG--RVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDA 227

Query: 95  ISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVIT 154
           +     +   G  PD  T N LI        GLC + + +EA  L  N +  G  P V+T
Sbjct: 228 LKIKELMEKNGCHPDDWTYNTLI-------YGLC-DQKTEEAEELLNNAVKEGFTPTVVT 279

Query: 155 YGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKE 214
           +  LING+C       ALR+  KM+S         K ++  +  +I+SL K+  + +AKE
Sbjct: 280 FTNLINGYCMAEKFDDALRMKNKMMSSK------CKLDLQVFGKLINSLIKKDRLKEAKE 333

Query: 215 LFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLC 274
           L  E+   G+ P V+  T++I G+C +G  +    +   M   G +PN  T+N ++  L 
Sbjct: 334 LLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLV 393

Query: 275 KGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVV 334
           K  K+++A  LL  M + G+ P+  TY +L+ G C     D A  +F  M   G K    
Sbjct: 394 KDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEH 453

Query: 335 SYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEM 394
           +Y +L +  CK    EEA S    I+  GV  T + Y TL+ G  +AG   +A  L + M
Sbjct: 454 AYAVLTDALCKAGRAEEAYSF---IVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERM 510

Query: 395 KLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRL 454
                 PD  TY++L+  LCK   + EA+ +   + +   +  I  +  LID + + G+ 
Sbjct: 511 IDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKH 570

Query: 455 DNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTL 514
           D+A  +++++   G  P+  TY++ I+  C++G+LE A D +L ME+ G AP+VVT+N L
Sbjct: 571 DHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNIL 630

Query: 515 MHG 517
           + G
Sbjct: 631 IDG 633



 Score =  218 bits (554), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 153/521 (29%), Positives = 252/521 (48%), Gaps = 54/521 (10%)

Query: 78  FNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEAT 137
           +N    ++A+    + +   Y +LV  GLLPD +T N +I  +       C E  +  A 
Sbjct: 36  YNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTMIKSY-------CKEGDLTTAH 88

Query: 138 WLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYS 197
             F+ ++  G+ P+  T   L+ G+CRTG L  A  L   M        +  + N +SY+
Sbjct: 89  RYFRLLLEGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPL------MGCQRNEYSYT 142

Query: 198 IIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDL 257
           I+I  LC    V KA  LFL MK  G +P V   T LI G C +G   +   LF  M   
Sbjct: 143 ILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQN 202

Query: 258 GPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTA 317
           G  P+++T+N MI    K G++N+A  + ELM + G +PD +TYN+L+ G C   + + A
Sbjct: 203 GVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLC-DQKTEEA 261

Query: 318 REIFLSMHSKGCKHTVVSYNILINGYC----------------------------KILN- 348
            E+  +   +G   TVV++  LINGYC                            K++N 
Sbjct: 262 EELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINS 321

Query: 349 ------VEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPD 402
                 ++EA  L  +I +NG+   VITY +++ G  ++G+   A ++   M+    +P+
Sbjct: 322 LIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPN 381

Query: 403 LSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFH 462
             TYN L+ GL K+  + +A+ L   ++ +     +  +  L+ G C     DNA+ LF 
Sbjct: 382 AWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFE 441

Query: 463 KLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNN 522
            + Q GL P    Y+++   LC+ G+ E+A  F++   + G A   V + TL+ GF +  
Sbjct: 442 MMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIV---RKGVALTKVYYTTLIDGFSKAG 498

Query: 523 KTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
            T     L+ +M   +    PD  T+S+++  L K ++ +E
Sbjct: 499 NTDFAATLIERMI--DEGCTPDSYTYSVLLHALCKQKRLNE 537



 Score =  204 bits (520), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 145/528 (27%), Positives = 246/528 (46%), Gaps = 22/528 (4%)

Query: 37  PET-QLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVI 95
           PET   N  +   C++G   L +A + F  M  M       S+ +L   +   +     +
Sbjct: 101 PETFTCNALVLGYCRTG--ELRKACWLFLMMPLMGCQRNEYSYTILIQGLCDAKCVRKAL 158

Query: 96  SFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITY 155
             +  +   G  P+      LI+       GLC   R+ +A  LF  M   GV P V+TY
Sbjct: 159 VLFLMMKRDGCSPNVRAFTFLIS-------GLCKSGRVGDARLLFDAMPQNGVVPSVMTY 211

Query: 156 GTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKEL 215
             +I G+ + G ++ AL++ + M     +NG     + ++Y+ +I  LC +   ++A+EL
Sbjct: 212 NAMIVGYSKLGRMNDALKIKELM----EKNG--CHPDDWTYNTLIYGLCDQK-TEEAEEL 264

Query: 216 FLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCK 275
                  G  P VV  T LI+G+C A  +++   +  +M+    + +L  F  +I+ L K
Sbjct: 265 LNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIK 324

Query: 276 GGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVS 335
             ++ EA  LL  +   GL P+  TY S++DGYC  G++D A E+   M   GC+    +
Sbjct: 325 KDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWT 384

Query: 336 YNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMK 395
           YN L+ G  K   + +AM+L  ++  +G+   VITY TLL G         A +LF+ M+
Sbjct: 385 YNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMME 444

Query: 396 LYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLD 455
              ++PD   Y +L D LCK    +EA   +  +           +  LIDG  KAG  D
Sbjct: 445 QNGLKPDEHAYAVLTDALCKAGRAEEA---YSFIVRKGVALTKVYYTTLIDGFSKAGNTD 501

Query: 456 NAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLM 515
            A  L  ++  +G  P   TYS+++H LC++ +L +A   L  M   G    +  +  L+
Sbjct: 502 FAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILI 561

Query: 516 HGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
              L+  K      + ++M        P  TT+++ ++   K+ +  +
Sbjct: 562 DEMLREGKHDHAKRMYNEMTSSGHK--PSATTYTVFINSYCKEGRLED 607



 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 149/521 (28%), Positives = 242/521 (46%), Gaps = 40/521 (7%)

Query: 56  LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNI 115
           L EA+     ++     P + ++  +     K+   D  +   + +   G  P+  T N 
Sbjct: 328 LKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNS 387

Query: 116 LINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLH 175
           L+        GL  + ++ +A  L   M   G+ P+VITY TL+ G C   +   A RL 
Sbjct: 388 LM-------YGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLF 440

Query: 176 KKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLI 235
           + M     +NGL  K +  +Y+++ D+LCK G   +A+E +  +  +G+    V  TTLI
Sbjct: 441 EMM----EQNGL--KPDEHAYAVLTDALCKAG---RAEEAYSFIVRKGVALTKVYYTTLI 491

Query: 236 HGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLN 295
            GF  AGN +    L   M+D G  P+  T++V++  LCK  ++NEA  +L+ M  RG+ 
Sbjct: 492 DGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIK 551

Query: 296 PDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSL 355
              F Y  L+D     G+ D A+ ++  M S G K +  +Y + IN YCK   +E+A  L
Sbjct: 552 CTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDL 611

Query: 356 YRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLY---NVEPDLSTYNILIDG 412
             ++   GV   V+TYN L+ G    G  GY  + F  +K     + EP+  TY +L+  
Sbjct: 612 ILKMEREGVAPDVVTYNILIDG---CGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKH 668

Query: 413 LCKNNCVQ----EAVKLFHMLEMN------------KFEFGIEIFNCLIDGLCKAGRLDN 456
           L K N       +   +++++E++                 +  ++ LI G CKAGRL+ 
Sbjct: 669 LLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEE 728

Query: 457 AWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMH 516
           A  L   +  KGL P    Y+++I   C     EKA  F+  M + G  P + ++  L+ 
Sbjct: 729 ACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVV 788

Query: 517 GFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAK 557
           G        KV  L   + E   N   D+  + I+ D L K
Sbjct: 789 GLCNEGDFEKVKSLFCDLLELGYN--HDEVAWKILNDGLLK 827



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 120/491 (24%), Positives = 216/491 (43%), Gaps = 35/491 (7%)

Query: 40  QLNEFLHENCKSGIINLNEARYFFGYMTHMQPS---PPISSFNLLFGAVAKNRHYDAVIS 96
           Q N + + +   G++   +       +T MQ     P + ++  L         +D    
Sbjct: 379 QPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFR 438

Query: 97  FYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYG 156
            +  +   GL PD     +L +        LC   R +EA   +  ++  GV    + Y 
Sbjct: 439 LFEMMEQNGLKPDEHAYAVLTD-------ALCKAGRAEEA---YSFIVRKGVALTKVYYT 488

Query: 157 TLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELF 216
           TLI+GF + GN   A  L ++M+    + G    +  ++YS+++ +LCK+  +++A  + 
Sbjct: 489 TLIDGFSKAGNTDFAATLIERMI----DEGCTPDS--YTYSVLLHALCKQKRLNEALPIL 542

Query: 217 LEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKG 276
            +M  RGI   +   T LI      G  +    ++ EM   G +P+  T+ V I+  CK 
Sbjct: 543 DQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKE 602

Query: 277 GKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSY 336
           G++ +A  L+  M + G+ PD  TYN L+DG   +G ID A      M    C+    +Y
Sbjct: 603 GRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTY 662

Query: 337 NILI----------------NGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQ 380
            +L+                +G   ++ ++    L  +++ +G+  TV TY++L++G  +
Sbjct: 663 CLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCK 722

Query: 381 AGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEI 440
           AG+   A  L D M    + P+   Y +LI   C     ++A+    ++    F+  +E 
Sbjct: 723 AGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLES 782

Query: 441 FNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYME 500
           +  L+ GLC  G  +    LF  L + G     V + I+  GL + G ++     L  ME
Sbjct: 783 YRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILNDGLLKAGYVDICFQMLSIME 842

Query: 501 KNGCAPNVVTF 511
           K  C  +  T+
Sbjct: 843 KRYCCISSQTY 853



 Score = 85.5 bits (210), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 82/359 (22%), Positives = 139/359 (38%), Gaps = 55/359 (15%)

Query: 29  RQIAAVSSPET-QLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAK 87
           R I    +P++   +  LH  CK     LNEA      M+       I ++ +L   + +
Sbjct: 509 RMIDEGCTPDSYTYSVLLHALCKQK--RLNEALPILDQMSLRGIKCTIFAYTILIDEMLR 566

Query: 88  NRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFG 147
              +D     Y ++ S G  P   T  + IN +       C E R+++A  L   M   G
Sbjct: 567 EGKHDHAKRMYNEMTSSGHKPSATTYTVFINSY-------CKEGRLEDAEDLILKMEREG 619

Query: 148 VRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYE----------------------- 184
           V PDV+TY  LI+G    G +  A    K+MV    E                       
Sbjct: 620 VAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRS 679

Query: 185 ---NGLIS-------------------KTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGR 222
              +G+ +                      + +YS +I   CK G +++A  L   M G+
Sbjct: 680 VDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGK 739

Query: 223 GINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEA 282
           G++P   + T LI   C    +E+       M + G +P L ++ +++  LC  G   + 
Sbjct: 740 GLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKV 799

Query: 283 NGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILIN 341
             L   +++ G N D   +  L DG    G +D   ++   M  + C  +  +Y ++ N
Sbjct: 800 KSLFCDLLELGYNHDEVAWKILNDGLLKAGYVDICFQMLSIMEKRYCCISSQTYALVTN 858


>gi|413949109|gb|AFW81758.1| hypothetical protein ZEAMMB73_033635 [Zea mays]
          Length = 691

 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 144/448 (32%), Positives = 236/448 (52%), Gaps = 22/448 (4%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
           P + ++N +  A++ +    +   F+  ++S G+ P+  T NILI       R LC    
Sbjct: 114 PSVLAYNAVLLALS-DASLTSARRFFDSMLSDGVAPNVYTYNILI-------RALCGRGH 165

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
            KEA  + ++M   G  P+V+TY TL+  F R G +  A RL   M+ G    GL  K N
Sbjct: 166 RKEALSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMLDG----GL--KPN 219

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
           + +++ +++ +CK G ++ A+++F EM   G+ P  V   TL+ G+C AG   E   +F 
Sbjct: 220 LVTFNSMVNGMCKAGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFA 279

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
           EM   G  P+++TF  +I  +CK G +  A  L+  M +RGL  +  T+ +L+DG+C  G
Sbjct: 280 EMTQKGIMPDVVTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKG 339

Query: 313 RIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYN 372
            +D A      M     K +VV YN LINGYC +  ++EA  L  ++ + G++  V+TY+
Sbjct: 340 FLDDALLAVRGMRQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYS 399

Query: 373 TLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMN 432
           T++S   +      A +L  +M    V PD  TY+ LI  LC+   + +A    H+L  N
Sbjct: 400 TIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDA----HVLFKN 455

Query: 433 KFEFGIE----IFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGK 488
             + G++     +  LIDG CK G ++ A  L  K+ + G++P VVTYS++I+GL +  +
Sbjct: 456 MIKLGLQPDEFTYTSLIDGHCKEGNVERALSLHDKMVKAGVLPDVVTYSVLINGLSKSAR 515

Query: 489 LEKANDFLLYMEKNGCAPNVVTFNTLMH 516
             +A   L  +      P    ++ LMH
Sbjct: 516 AMEAQQLLFKLYHEEPIPANTKYDALMH 543



 Score =  231 bits (590), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 152/516 (29%), Positives = 248/516 (48%), Gaps = 31/516 (6%)

Query: 55  NLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLN 114
           +L  AR FF  M     +P + ++N+L  A+    H    +S  R +   G  P+ +T N
Sbjct: 130 SLTSARRFFDSMLSDGVAPNVYTYNILIRALCGRGHRKEALSILRDMRGAGCGPNVVTYN 189

Query: 115 ILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRL 174
            L+  F            +  A  L   M+  G++P+++T+ +++NG C+ G +  A ++
Sbjct: 190 TLVAAFFRA-------GEVDGAERLVGMMLDGGLKPNLVTFNSMVNGMCKAGKMEDARKV 242

Query: 175 HKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTL 234
             +M+      GL    +  SY+ ++   CK G   +A  +F EM  +GI P VV  T+L
Sbjct: 243 FDEMM----REGL--APDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSL 296

Query: 235 IHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGL 294
           IH  C AGN E    L  +M + G + N +TF  +ID  CK G +++A   +  M Q  +
Sbjct: 297 IHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMRQCRI 356

Query: 295 NPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMS 354
            P    YN+L++GYC+VGR+D ARE+   M +KG K  VV+Y+ +I+ YCK  +   A  
Sbjct: 357 KPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFE 416

Query: 355 LYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLC 414
           L +Q++  GV    ITY++L+  L +  +   A  LF  M    ++PD  TY  LIDG C
Sbjct: 417 LNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHC 476

Query: 415 KNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVV 474
           K   V+ A+ L   +        +  ++ LI+GL K+ R   A +L  KL  +  +P   
Sbjct: 477 KEGNVERALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEEPIPANT 536

Query: 475 TYSIMIH---------------GLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFL 519
            Y  ++H               G C KG + +A+     M       +   ++ L+HG  
Sbjct: 537 KYDALMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHC 596

Query: 520 QNNKTSKVVELLHKMAEPERNLVPDDT-TFSIVVDL 554
           +     K +    +M   +R   P+ T T S++  L
Sbjct: 597 RAGNVMKALSFHKQML--QRGFAPNSTSTISLIRGL 630



 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 132/442 (29%), Positives = 226/442 (51%), Gaps = 20/442 (4%)

Query: 147 GVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKE 206
           G  P V+ Y  ++       +L+ A R    M+S    +G+    N+++Y+I+I +LC  
Sbjct: 111 GYVPSVLAYNAVLLAL-SDASLTSARRFFDSMLS----DGV--APNVYTYNILIRALCGR 163

Query: 207 GLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTF 266
           G   +A  +  +M+G G  P VV   TL+  F  AG  +    L   MLD G +PNL+TF
Sbjct: 164 GHRKEALSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTF 223

Query: 267 NVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHS 326
           N M++ +CK GK+ +A  + + M++ GL PD  +YN+L+ GYC  G    A  +F  M  
Sbjct: 224 NSMVNGMCKAGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQ 283

Query: 327 KGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGY 386
           KG    VV++  LI+  CK  N+E A++L RQ+   G++   +T+  L+ G  + G    
Sbjct: 284 KGIMPDVVTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDD 343

Query: 387 AQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLID 446
           A      M+   ++P +  YN LI+G C    + EA +L H +E    +  +  ++ +I 
Sbjct: 344 ALLAVRGMRQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIIS 403

Query: 447 GLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAP 506
             CK     +A+EL  ++ +KG++P  +TYS +I  LC + +L  A+     M K G  P
Sbjct: 404 AYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQP 463

Query: 507 NVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEK------ 560
           +  T+ +L+ G  +     + + L  KM +    ++PD  T+S++++ L+K  +      
Sbjct: 464 DEFTYTSLIDGHCKEGNVERALSLHDKMVKA--GVLPDVVTYSVLINGLSKSARAMEAQQ 521

Query: 561 -----YHECSAVSKSSYRACLY 577
                YHE    + + Y A ++
Sbjct: 522 LLFKLYHEEPIPANTKYDALMH 543



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 104/336 (30%), Positives = 178/336 (52%), Gaps = 2/336 (0%)

Query: 251 FIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCL 310
           F  ML  G  PN+ T+N++I  LC  G   EA  +L  M   G  P+  TYN+L+  +  
Sbjct: 138 FDSMLSDGVAPNVYTYNILIRALCGRGHRKEALSILRDMRGAGCGPNVVTYNTLVAAFFR 197

Query: 311 VGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVIT 370
            G +D A  +   M   G K  +V++N ++NG CK   +E+A  ++ +++  G+    ++
Sbjct: 198 AGEVDGAERLVGMMLDGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMMREGLAPDGVS 257

Query: 371 YNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLE 430
           YNTL+ G  +AG +  A  +F EM    + PD+ T+  LI  +CK   ++ AV L   + 
Sbjct: 258 YNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLEWAVTLVRQMR 317

Query: 431 MNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLE 490
               +     F  LIDG CK G LD+A      + Q  + P+VV Y+ +I+G C  G+++
Sbjct: 318 ERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMRQCRIKPSVVCYNALINGYCMVGRMD 377

Query: 491 KANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSI 550
           +A + L  ME  G  P+VVT++T++  + +N  T    EL  +M E  + ++PD  T+S 
Sbjct: 378 EARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLE--KGVLPDAITYSS 435

Query: 551 VVDLLAKDEKYHECSAVSKSSYRACLYVTIFQPSSL 586
           ++ +L ++++  +   + K+  +  L    F  +SL
Sbjct: 436 LIRVLCEEKRLSDAHVLFKNMIKLGLQPDEFTYTSL 471



 Score =  169 bits (427), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 129/482 (26%), Positives = 218/482 (45%), Gaps = 67/482 (13%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
           N  ++  CK+G   + +AR  F  M     +P   S+N L G   K       +S + ++
Sbjct: 224 NSMVNGMCKAG--KMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEM 281

Query: 102 VSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLING 161
              G++PD +T   LI+        +C    ++ A  L + M   G++ + +T+  LI+G
Sbjct: 282 TQKGIMPDVVTFTSLIHV-------MCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDG 334

Query: 162 FCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKG 221
           FC+ G L  AL   + M           K ++  Y+ +I+  C  G +D+A+EL  EM+ 
Sbjct: 335 FCKKGFLDDALLAVRGMRQCRI------KPSVVCYNALINGYCMVGRMDEARELLHEMEA 388

Query: 222 RGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINE 281
           +G+ P VV  +T+I  +C   +      L  +ML+ G  P+ +T++ +I  LC+  ++++
Sbjct: 389 KGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSD 448

Query: 282 ANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILIN 341
           A+ L + MI+ GL PD FTY SL+DG+C  G ++ A  +   M   G    VV+Y++LIN
Sbjct: 449 AHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVERALSLHDKMVKAGVLPDVVTYSVLIN 508

Query: 342 GYCKILNVEEAMSL---------------YRQIISNGVRQTVITYNTLLSGLFQAGQAGY 386
           G  K     EA  L               Y  ++    +  + +   LL G    G    
Sbjct: 509 GLSKSARAMEAQQLLFKLYHEEPIPANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNE 568

Query: 387 AQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNK------------- 433
           A K++  M   N   D S Y++LI G C+   V +A+  FH   + +             
Sbjct: 569 ADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALS-FHKQMLQRGFAPNSTSTISLI 627

Query: 434 ---FEFGI---------EIFNC-----------LIDGLCKAGRLDNAWELFHKLPQKGLV 470
              FE G+         ++ NC           LID     G +D   ++ H + + GL+
Sbjct: 628 RGLFENGMVVEADQVIQQLLNCCSLADAEASKALIDLNLNEGNVDAVLDVLHGMAKDGLL 687

Query: 471 PT 472
           P+
Sbjct: 688 PS 689


>gi|218184541|gb|EEC66968.1| hypothetical protein OsI_33625 [Oryza sativa Indica Group]
          Length = 1351

 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 140/491 (28%), Positives = 257/491 (52%), Gaps = 15/491 (3%)

Query: 77  SFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEA 136
           ++N L   + K+      +  Y+ ++  G++P   T ++L+  FG +         ++  
Sbjct: 241 TYNGLVYFLVKSGFDREALEVYKVMMVDGVVPSVRTYSVLMVAFGKR-------RDVETV 293

Query: 137 TWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSY 196
            WL + M A GV+P+V +Y   I    +      A R+  +M +         K ++ ++
Sbjct: 294 LWLLREMEAHGVKPNVYSYTICIRVLGQARRFDEAYRILAEMENEG------CKPDVITH 347

Query: 197 SIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLD 256
           +++I  LC  G +  AK++F +MK     P  V   TL+  F   G  + V  ++  M  
Sbjct: 348 TVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFADNGESQSVMEIWNAMKA 407

Query: 257 LGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDT 316
            G   N++ +  +ID LC+ G++ EA  + + M Q+G+ P++++YNSL+ G+    R   
Sbjct: 408 DGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGD 467

Query: 317 AREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLS 376
           A E+F  M   G K    ++ + IN Y K     +A+  Y  + S G+   V+  N +L 
Sbjct: 468 ALELFKYMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLF 527

Query: 377 GLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEF 436
           GL ++G+ G A+++F E+K   V PD  TY ++I    K +   EAVK+F+ +  N    
Sbjct: 528 GLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVP 587

Query: 437 GIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFL 496
            + + N LID L KAGR D AW++F++L +  L PT  TY+ ++ GL R+GK+++    L
Sbjct: 588 DVLVVNSLIDTLYKAGRGDEAWQIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLL 647

Query: 497 LYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLA 556
             M  +   PN++T+NT++    +N   +  +++L+ M    +  +PD ++++ V+  L 
Sbjct: 648 EEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMT--TKGCIPDLSSYNTVIYGLV 705

Query: 557 KDEKYHECSAV 567
           K+E+Y+E  ++
Sbjct: 706 KEERYNEAFSI 716



 Score =  201 bits (512), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 128/464 (27%), Positives = 231/464 (49%), Gaps = 17/464 (3%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
           P + S+ +    + + R +D       ++ + G  PD +T  +LI         LC   R
Sbjct: 307 PNVYSYTICIRVLGQARRFDEAYRILAEMENEGCKPDVITHTVLIQV-------LCDAGR 359

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
           I +A  +F  M     +PD +TY TL++ F   G     + +   M +  Y +      N
Sbjct: 360 ISDAKDVFWKMKKSDQKPDRVTYITLLDKFADNGESQSVMEIWNAMKADGYND------N 413

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
           + +Y+ +ID+LC+ G V +A E+F EMK +GI P      +LI GF  A  + +   LF 
Sbjct: 414 VVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFK 473

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
            M   GP+PN  T  + I+   K G+  +A    ELM  +G+ PD    N+++ G    G
Sbjct: 474 YMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSG 533

Query: 313 RIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYN 372
           R+  A+ +F  + + G     ++Y ++I    K    +EA+ ++  +I N     V+  N
Sbjct: 534 RLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLVVN 593

Query: 373 TLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMN 432
           +L+  L++AG+   A ++F ++K  N+EP   TYN L+ GL +   V+E + L   +  +
Sbjct: 594 SLIDTLYKAGRGDEAWQIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHS 653

Query: 433 KFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKA 492
            +   +  +N ++D LCK G +++A ++ + +  KG +P + +Y+ +I+GL ++ +  +A
Sbjct: 654 NYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEA 713

Query: 493 NDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAE 536
                 M+K    P+  T  T++  F+   K   + E LH + E
Sbjct: 714 FSIFCQMKKV-LIPDYATLCTILPSFV---KIGLMKEALHIIKE 753



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 148/547 (27%), Positives = 248/547 (45%), Gaps = 23/547 (4%)

Query: 12   SSETVSKVKLSSLFKSPRQIAAVSSPETQLNEFLHENCKSGIINLNEARYFFGYMTHMQP 71
            S E++  ++   L KS   +  V +     N  L    KSG   L  A+  F  +  M  
Sbjct: 497  SGESIKAIQRYELMKSKGIVPDVVAG----NAVLFGLAKSG--RLGMAKRVFHELKAMGV 550

Query: 72   SPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVEN 131
            SP   ++ ++    +K   +D  +  +  ++    +PD L +N LI+      RG     
Sbjct: 551  SPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLVVNSLIDTLYKAGRG----- 605

Query: 132  RIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKT 191
               EA  +F  +    + P   TY TL+ G  R G +   + L ++M   +Y        
Sbjct: 606  --DEAWQIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNY------PP 657

Query: 192  NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
            N+ +Y+ I+D LCK G V+ A ++   M  +G  P +    T+I+G      + E   +F
Sbjct: 658  NLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIF 717

Query: 252  IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLL-ELMIQRGLNPDRFTYNSLMDGYCL 310
             +M  +   P+  T   ++    K G + EA  ++ E  +Q G   DR + +SLM+G   
Sbjct: 718  CQMKKV-LIPDYATLCTILPSFVKIGLMKEALHIIKEYFLQPGSKTDRSSCHSLMEGILK 776

Query: 311  VGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVIT 370
                + + E    + S G          LI   CK     EA  L ++  S GV     +
Sbjct: 777  KAGTEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGS 836

Query: 371  YNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLE 430
            YN+L+ GL        A+ LF EMK     PD  TYN+L+D + K+  ++E +K+   + 
Sbjct: 837  YNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMH 896

Query: 431  MNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLE 490
               +E     +N +I GL K+ RL+ A +L++ L  +G  PT  TY  ++ GL + G++E
Sbjct: 897  RKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIE 956

Query: 491  KANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSI 550
             A +    M + GC  N   +N L++G      T KV  L   M   ++ + PD  +++I
Sbjct: 957  DAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMV--DQGINPDIKSYTI 1014

Query: 551  VVDLLAK 557
            ++D L K
Sbjct: 1015 IIDTLCK 1021



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 134/487 (27%), Positives = 236/487 (48%), Gaps = 17/487 (3%)

Query: 49   CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
            CK+G +N  +A      MT     P +SS+N +   + K   Y+   S + ++  + L+P
Sbjct: 670  CKNGAVN--DALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQMKKV-LIP 726

Query: 109  DFLTLNILINCFGNKERGLCVENRIKEATWLFKN-MIAFGVRPDVITYGTLINGFCRTGN 167
            D+ TL  ++  F   + GL     +KEA  + K   +  G + D  +  +L+ G  +   
Sbjct: 727  DYATLCTILPSF--VKIGL-----MKEALHIIKEYFLQPGSKTDRSSCHSLMEGILKKAG 779

Query: 168  LSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPA 227
               ++   + + S    +G+    + F    +I  LCK+    +A EL  + K  G++  
Sbjct: 780  TEKSIEFAEIIAS----SGIT--LDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLK 833

Query: 228  VVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLE 287
                 +LI G       +   GLF EM +LG  P+  T+N+++D + K  +I E   + E
Sbjct: 834  TGSYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQE 893

Query: 288  LMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKIL 347
             M ++G      TYN+++ G     R++ A +++ ++ S+G   T  +Y  L++G  K  
Sbjct: 894  EMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAG 953

Query: 348  NVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYN 407
             +E+A +L+ +++  G +     YN LL+G   AG       LF +M    + PD+ +Y 
Sbjct: 954  RIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYT 1013

Query: 408  ILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQK 467
            I+ID LCK   + + +  F  L     E  +  +N LIDGL K+ RL+ A  LF+++ +K
Sbjct: 1014 IIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKK 1073

Query: 468  GLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKV 527
            G+VP + TY+ +I  L + GK  +A      +   G  PNV T+N L+ G+  +  T   
Sbjct: 1074 GIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRGYSVSGSTDSA 1133

Query: 528  VELLHKM 534
                 +M
Sbjct: 1134 YAAYGRM 1140



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 120/470 (25%), Positives = 216/470 (45%), Gaps = 49/470 (10%)

Query: 132 RIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLS---VALRLHKKMVSGDYENGLI 188
           R+ +   +F  M    V+ +V T+  +  G    G L    VAL + K       E G++
Sbjct: 184 RVGDMAEVFDVMQRQIVKANVGTFAAIFGGLGVEGGLRSAPVALPVMK-------EAGIV 236

Query: 189 SKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVN 248
              N ++Y+ ++  L K G   +A E++  M   G+ P+V   + L+  F    + E V 
Sbjct: 237 --LNAYTYNGLVYFLVKSGFDREALEVYKVMMVDGVVPSVRTYSVLMVAFGKRRDVETVL 294

Query: 249 GLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGY 308
            L  EM   G +PN+ ++ + I  L +  + +EA  +L  M   G  PD  T+  L+   
Sbjct: 295 WLLREMEAHGVKPNVYSYTICIRVLGQARRFDEAYRILAEMENEGCKPDVITHTVLIQVL 354

Query: 309 CLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTV 368
           C  GRI  A+++F  M     K   V+Y  L++ +      +  M ++  + ++G    V
Sbjct: 355 CDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFADNGESQSVMEIWNAMKADGYNDNV 414

Query: 369 ITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLF-- 426
           + Y  ++  L Q G+   A ++FDEMK   + P+  +YN LI G  K +   +A++LF  
Sbjct: 415 VAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKY 474

Query: 427 ------------HMLEMN-------------KFEF--------GIEIFNCLIDGLCKAGR 453
                       H+L +N             ++E          +   N ++ GL K+GR
Sbjct: 475 MDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGR 534

Query: 454 LDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNT 513
           L  A  +FH+L   G+ P  +TY++MI    +  K ++A      M +N C P+V+  N+
Sbjct: 535 LGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLVVNS 594

Query: 514 LMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
           L+    +  +  +  ++ +++   E NL P D T++ ++  L ++ K  E
Sbjct: 595 LIDTLYKAGRGDEAWQIFYQLK--EMNLEPTDGTYNTLLAGLGREGKVKE 642



 Score =  129 bits (323), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 94/379 (24%), Positives = 175/379 (46%), Gaps = 9/379 (2%)

Query: 199 IIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLG 258
           ++D +   G V    E+F  M+ + +   V     +  G    G           M + G
Sbjct: 175 MLDLMRDHGRVGDMAEVFDVMQRQIVKANVGTFAAIFGGLGVEGGLRSAPVALPVMKEAG 234

Query: 259 PRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAR 318
              N  T+N ++  L K G   EA  + ++M+  G+ P   TY+ LM  +     ++T  
Sbjct: 235 IVLNAYTYNGLVYFLVKSGFDREALEVYKVMMVDGVVPSVRTYSVLMVAFGKRRDVETVL 294

Query: 319 EIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGL 378
            +   M + G K  V SY I I    +    +EA  +  ++ + G +  VIT+  L+  L
Sbjct: 295 WLLREMEAHGVKPNVYSYTICIRVLGQARRFDEAYRILAEMENEGCKPDVITHTVLIQVL 354

Query: 379 FQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGI 438
             AG+   A+ +F +MK  + +PD  TY  L+D    N   Q  +++++ ++ + +   +
Sbjct: 355 CDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFADNGESQSVMEIWNAMKADGYNDNV 414

Query: 439 EIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLY 498
             +  +ID LC+ GR+  A E+F ++ QKG+VP   +Y+ +I G  +  +   A +   Y
Sbjct: 415 VAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKY 474

Query: 499 MEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKD 558
           M+ +G  PN  T    ++ + ++ ++ K ++    M    + +VPD    + V+  LAK 
Sbjct: 475 MDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMK--SKGIVPDVVAGNAVLFGLAKS 532

Query: 559 EK-------YHECSAVSKS 570
            +       +HE  A+  S
Sbjct: 533 GRLGMAKRVFHELKAMGVS 551


>gi|414590917|tpg|DAA41488.1| TPA: hypothetical protein ZEAMMB73_494908 [Zea mays]
          Length = 601

 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 149/500 (29%), Positives = 257/500 (51%), Gaps = 24/500 (4%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMT---HMQPSPPISSFNLLFGAVAKNRHYDAVISFY 98
           N  L   C+ G  +L +A      M+   H    P   S+ ++   +  +R  D  ++  
Sbjct: 80  NIVLAALCRRGG-DLRQALSLLADMSREAHPAARPNAVSYTMVMRGLCASRRTDEAVALL 138

Query: 99  RKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTL 158
           R + + G+  D +T   LI       RGLC    +  A  L   M   GV P+VI Y  L
Sbjct: 139 RSMQASGVRADVVTYGTLI-------RGLCDAAELDGALELLGEMCGSGVHPNVIVYSCL 191

Query: 159 INGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLE 218
           + G+CR+G      ++ ++M      + L  + ++  ++  ID LCK+G + KA ++   
Sbjct: 192 LRGYCRSGRWQDVSKVFEEM------SRLGVEPDVIMFTGFIDDLCKKGRIGKAVKVKDI 245

Query: 219 MKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGK 278
           M  RG+ P VV    LI+  C  G+  E   L  EM D G  P+++T+N +I  L    +
Sbjct: 246 MVQRGLEPNVVTYNVLINCLCKEGSVREALALRNEMDDKGVAPDVVTYNTLIAGLSGVLE 305

Query: 279 INEANGLLELMIQRG--LNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSY 336
           ++ A GLLE MIQ    + PD  T+NS++ G C +GR+  A  +   M  +GC   +V+Y
Sbjct: 306 MDGAMGLLEEMIQGDTLVEPDVVTFNSVIHGLCKIGRMRQAISVREMMAERGCMCNLVTY 365

Query: 337 NILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKL 396
           N LI G+ ++  V  AM+L  ++IS+G+     TY+ L++G  +  +   A+     M  
Sbjct: 366 NYLIGGFLRVHKVNMAMNLMSELISSGLEPDSFTYSILINGFSKLWEVDRAEMFLRTMTQ 425

Query: 397 YNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEI--FNCLIDGLCKAGRL 454
             +  +L  Y  L+  LC+   +++A+ LF+ ++MN    G++   ++ ++ G CK+G +
Sbjct: 426 RGIRAELFHYIPLLAALCQLGMMEQAMVLFNEMDMN---CGLDAVAYSTMMYGACKSGDI 482

Query: 455 DNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTL 514
             A +L   +  +GL P  VTYSI+I+   + G LE+A   L  M  +G  P+V  F++L
Sbjct: 483 KAAKQLLQDMLDEGLAPDAVTYSILINMFAKLGDLEEAERVLKQMAASGFVPDVAVFDSL 542

Query: 515 MHGFLQNNKTSKVVELLHKM 534
           + G+    + +K+++L+H+M
Sbjct: 543 IKGYSAEGQINKILDLIHEM 562



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 127/444 (28%), Positives = 209/444 (47%), Gaps = 48/444 (10%)

Query: 147 GVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKE 206
             RP+ ++Y  ++ G C +     A+ L + M +         + ++ +Y  +I  LC  
Sbjct: 110 AARPNAVSYTMVMRGLCASRRTDEAVALLRSMQASGV------RADVVTYGTLIRGLCDA 163

Query: 207 GLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTF 266
             +D A EL  EM G G++P V+V + L+ G+C +G W++V+ +F EM  LG  P+++ F
Sbjct: 164 AELDGALELLGEMCGSGVHPNVIVYSCLLRGYCRSGRWQDVSKVFEEMSRLGVEPDVIMF 223

Query: 267 NVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHS 326
              ID LCK G+I +A  + ++M+QRGL P+  TYN L++  C  G +  A  +   M  
Sbjct: 224 TGFIDDLCKKGRIGKAVKVKDIMVQRGLEPNVVTYNVLINCLCKEGSVREALALRNEMDD 283

Query: 327 KGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNG----------------------V 364
           KG    VV+YN LI G   +L ++ AM L  ++I                         +
Sbjct: 284 KGVAPDVVTYNTLIAGLSGVLEMDGAMGLLEEMIQGDTLVEPDVVTFNSVIHGLCKIGRM 343

Query: 365 RQTV---------------ITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNIL 409
           RQ +               +TYN L+ G  +  +   A  L  E+    +EPD  TY+IL
Sbjct: 344 RQAISVREMMAERGCMCNLVTYNYLIGGFLRVHKVNMAMNLMSELISSGLEPDSFTYSIL 403

Query: 410 IDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQK-G 468
           I+G  K   V  A      +        +  +  L+  LC+ G ++ A  LF+++    G
Sbjct: 404 INGFSKLWEVDRAEMFLRTMTQRGIRAELFHYIPLLAALCQLGMMEQAMVLFNEMDMNCG 463

Query: 469 LVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVV 528
           L    V YS M++G C+ G ++ A   L  M   G AP+ VT++ L++ F +     +  
Sbjct: 464 L--DAVAYSTMMYGACKSGDIKAAKQLLQDMLDEGLAPDAVTYSILINMFAKLGDLEEAE 521

Query: 529 ELLHKMAEPERNLVPDDTTFSIVV 552
            +L +MA      VPD   F  ++
Sbjct: 522 RVLKQMAAS--GFVPDVAVFDSLI 543



 Score =  194 bits (494), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 130/457 (28%), Positives = 215/457 (47%), Gaps = 42/457 (9%)

Query: 151 DVITYGTLINGFCRTG-NLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLV 209
           D ++Y  ++   CR G +L  AL L   M     E    ++ N  SY++++  LC     
Sbjct: 75  DAVSYNIVLAALCRRGGDLRQALSLLADM---SREAHPAARPNAVSYTMVMRGLCASRRT 131

Query: 210 DKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVM 269
           D+A  L   M+  G+   VV   TLI G C A   +    L  EM   G  PN++ ++ +
Sbjct: 132 DEAVALLRSMQASGVRADVVTYGTLIRGLCDAAELDGALELLGEMCGSGVHPNVIVYSCL 191

Query: 270 IDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGC 329
           +   C+ G+  + + + E M + G+ PD   +   +D  C  GRI  A ++   M  +G 
Sbjct: 192 LRGYCRSGRWQDVSKVFEEMSRLGVEPDVIMFTGFIDDLCKKGRIGKAVKVKDIMVQRGL 251

Query: 330 KHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQK 389
           +  VV+YN+LIN  CK  +V EA++L  ++   GV   V+TYNTL++GL    +   A  
Sbjct: 252 EPNVVTYNVLINCLCKEGSVREALALRNEMDDKGVAPDVVTYNTLIAGLSGVLEMDGAMG 311

Query: 390 LFDEMKLYN--VEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDG 447
           L +EM   +  VEPD+ T+N +I GLCK   +++A+ +  M+        +  +N LI G
Sbjct: 312 LLEEMIQGDTLVEPDVVTFNSVIHGLCKIGRMRQAISVREMMAERGCMCNLVTYNYLIGG 371

Query: 448 LCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNG---- 503
             +  +++ A  L  +L   GL P   TYSI+I+G  +  ++++A  FL  M + G    
Sbjct: 372 FLRVHKVNMAMNLMSELISSGLEPDSFTYSILINGFSKLWEVDRAEMFLRTMTQRGIRAE 431

Query: 504 ------------------------------CAPNVVTFNTLMHGFLQNNKTSKVVELLHK 533
                                         C  + V ++T+M+G  ++       +LL  
Sbjct: 432 LFHYIPLLAALCQLGMMEQAMVLFNEMDMNCGLDAVAYSTMMYGACKSGDIKAAKQLLQD 491

Query: 534 MAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKS 570
           M   +  L PD  T+SI++++ AK     E   V K 
Sbjct: 492 ML--DEGLAPDAVTYSILINMFAKLGDLEEAERVLKQ 526



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 87/285 (30%), Positives = 149/285 (52%), Gaps = 5/285 (1%)

Query: 297 DRFTYNSLMDGYCLVG-RIDTAREIFLSMHSKG---CKHTVVSYNILINGYCKILNVEEA 352
           D  +YN ++   C  G  +  A  +   M  +     +   VSY +++ G C     +EA
Sbjct: 75  DAVSYNIVLAALCRRGGDLRQALSLLADMSREAHPAARPNAVSYTMVMRGLCASRRTDEA 134

Query: 353 MSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDG 412
           ++L R + ++GVR  V+TY TL+ GL  A +   A +L  EM    V P++  Y+ L+ G
Sbjct: 135 VALLRSMQASGVRADVVTYGTLIRGLCDAAELDGALELLGEMCGSGVHPNVIVYSCLLRG 194

Query: 413 LCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPT 472
            C++   Q+  K+F  +     E  + +F   ID LCK GR+  A ++   + Q+GL P 
Sbjct: 195 YCRSGRWQDVSKVFEEMSRLGVEPDVIMFTGFIDDLCKKGRIGKAVKVKDIMVQRGLEPN 254

Query: 473 VVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLH 532
           VVTY+++I+ LC++G + +A      M+  G AP+VVT+NTL+ G     +    + LL 
Sbjct: 255 VVTYNVLINCLCKEGSVREALALRNEMDDKGVAPDVVTYNTLIAGLSGVLEMDGAMGLLE 314

Query: 533 KMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSK-SSYRACL 576
           +M + +  + PD  TF+ V+  L K  +  +  +V +  + R C+
Sbjct: 315 EMIQGDTLVEPDVVTFNSVIHGLCKIGRMRQAISVREMMAERGCM 359



 Score =  135 bits (339), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 102/393 (25%), Positives = 169/393 (43%), Gaps = 47/393 (11%)

Query: 44  FLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVS 103
            L   C+SG     +    F  M+ +   P +  F      + K       +     +V 
Sbjct: 191 LLRGYCRSG--RWQDVSKVFEEMSRLGVEPDVIMFTGFIDDLCKKGRIGKAVKVKDIMVQ 248

Query: 104 IGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFC 163
            GL P+ +T N+LINC       LC E  ++EA  L   M   GV PDV+TY TLI G  
Sbjct: 249 RGLEPNVVTYNVLINC-------LCKEGSVREALALRNEMDDKGVAPDVVTYNTLIAGLS 301

Query: 164 RTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRG 223
               +  A+ L ++M+ GD     + + ++ +++ +I  LCK G + +A  +   M  RG
Sbjct: 302 GVLEMDGAMGLLEEMIQGDT----LVEPDVVTFNSVIHGLCKIGRMRQAISVREMMAERG 357

Query: 224 INPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEAN 283
               +V    LI GF           L  E++  G  P+  T++++I+   K  +++ A 
Sbjct: 358 CMCNLVTYNYLIGGFLRVHKVNMAMNLMSELISSGLEPDSFTYSILINGFSKLWEVDRAE 417

Query: 284 GLLELMIQRGLNPDRF----------------------------------TYNSLMDGYC 309
             L  M QRG+  + F                                   Y+++M G C
Sbjct: 418 MFLRTMTQRGIRAELFHYIPLLAALCQLGMMEQAMVLFNEMDMNCGLDAVAYSTMMYGAC 477

Query: 310 LVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVI 369
             G I  A+++   M  +G     V+Y+ILIN + K+ ++EEA  + +Q+ ++G    V 
Sbjct: 478 KSGDIKAAKQLLQDMLDEGLAPDAVTYSILINMFAKLGDLEEAERVLKQMAASGFVPDVA 537

Query: 370 TYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPD 402
            +++L+ G    GQ      L  EM+  NV  D
Sbjct: 538 VFDSLIKGYSAEGQINKILDLIHEMRAKNVAID 570



 Score = 43.9 bits (102), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 28/95 (29%), Positives = 45/95 (47%), Gaps = 7/95 (7%)

Query: 444 LIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRK-GKLEKANDFLLYMEKN 502
           L++   +A  +  A  L   LP    V   V+Y+I++  LCR+ G L +A   L  M + 
Sbjct: 50  LLNRRLRAAPVTEACSLLSALPD---VRDAVSYNIVLAALCRRGGDLRQALSLLADMSRE 106

Query: 503 ---GCAPNVVTFNTLMHGFLQNNKTSKVVELLHKM 534
                 PN V++  +M G   + +T + V LL  M
Sbjct: 107 AHPAARPNAVSYTMVMRGLCASRRTDEAVALLRSM 141


>gi|125542792|gb|EAY88931.1| hypothetical protein OsI_10416 [Oryza sativa Indica Group]
          Length = 796

 Score =  233 bits (594), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 140/495 (28%), Positives = 241/495 (48%), Gaps = 14/495 (2%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
           N  +H +C  G   L +A      M     SP   ++N L  A  +        +   ++
Sbjct: 212 NLLVHTHCSKG--TLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARM 269

Query: 102 VSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLING 161
              G+ P   T N L++ F            IK+AT + ++M A+G  PD+ TY  L  G
Sbjct: 270 KRDGIAPTQPTYNTLVSAFARL-------GWIKQATKVVESMTAYGFEPDLRTYNVLAMG 322

Query: 162 FCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKG 221
            C+ G +  A RL  +M     E    +  ++ +Y+ ++D+  K      A  L  EM+ 
Sbjct: 323 LCQAGKVDEAFRLKDEM-----ERLGTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRD 377

Query: 222 RGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINE 281
           +G+ P +V    ++   C  G  EE  G   ++ + G  P+++T+N +ID  CK G + +
Sbjct: 378 KGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAK 437

Query: 282 ANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILIN 341
           A  L++ M+ +GL  D FT N+++   C + R + A E+  S   +G     VSY  ++ 
Sbjct: 438 AFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMA 497

Query: 342 GYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEP 401
            Y K  N E A+ L+ Q+I   +  ++ TYNTL+ GL +  +   A    +E     + P
Sbjct: 498 AYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNEFVEKGLVP 557

Query: 402 DLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELF 461
           D +TYNI+I   CK   ++ A +  + +  N F+  +   N L++GLC  G+LD A +LF
Sbjct: 558 DETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLF 617

Query: 462 HKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQN 521
               +KG    V+TY+ +I  +C+ G ++ A  F   ME  G  P+  T+N ++    + 
Sbjct: 618 ESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEA 677

Query: 522 NKTSKVVELLHKMAE 536
            ++ +   +LHK+A+
Sbjct: 678 GRSEEAHNMLHKLAD 692



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 131/463 (28%), Positives = 223/463 (48%), Gaps = 16/463 (3%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
           N  L+ +C+ G+  L EAR     M     +P   ++N L  A A+             +
Sbjct: 247 NTLLNAHCRKGM--LGEARALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESM 304

Query: 102 VSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVR-PDVITYGTLIN 160
            + G  PD  T N+L         GLC   ++ EA  L   M   G   PDV+TY TL++
Sbjct: 305 TAYGFEPDLRTYNVLA-------MGLCQAGKVDEAFRLKDEMERLGTALPDVVTYNTLVD 357

Query: 161 GFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMK 220
              +    S ALRL ++M     + G+  K  + +++I++ SLCKEG +++A     ++ 
Sbjct: 358 ACFKWRCSSDALRLLEEM----RDKGV--KPTLVTHNIVVKSLCKEGKLEEALGKLEKIA 411

Query: 221 GRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKIN 280
             G+ P V+   TLI  +C AGN  +   L  EM+  G + +  T N ++  LCK  +  
Sbjct: 412 EEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYE 471

Query: 281 EANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILI 340
           +A  LL    QRG  PD  +Y ++M  Y      + A  ++  M  +    ++ +YN LI
Sbjct: 472 DAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLI 531

Query: 341 NGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVE 400
            G C++  ++EA+    + +  G+     TYN ++    + G    A +  ++M   + +
Sbjct: 532 KGLCRMERLKEAIDKLNEFVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFK 591

Query: 401 PDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWEL 460
           PD+ T N L++GLC +  + +A+KLF        +  +  +N LI  +CK G +D A   
Sbjct: 592 PDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHF 651

Query: 461 FHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNG 503
           F  +  KGL P   TY++++  L   G+ E+A++ L  +  +G
Sbjct: 652 FDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAHNMLHKLADSG 694



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 110/415 (26%), Positives = 198/415 (47%), Gaps = 11/415 (2%)

Query: 147 GVRPDVITYGTLINGFCRTGNL--SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLC 204
           GVRP +     +++   R+ +     +L + + ++       L    N +++++++ + C
Sbjct: 166 GVRPSLQAANAVLSALSRSPSTLPQASLDVFRSLIE------LRLHPNHYTFNLLVHTHC 219

Query: 205 KEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLL 264
            +G +  A      M+G G++P  V   TL++  C  G   E   L   M   G  P   
Sbjct: 220 SKGTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDGIAPTQP 279

Query: 265 TFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSM 324
           T+N ++    + G I +A  ++E M   G  PD  TYN L  G C  G++D A  +   M
Sbjct: 280 TYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAMGLCQAGKVDEAFRLKDEM 339

Query: 325 HSKGCK-HTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQ 383
              G     VV+YN L++   K     +A+ L  ++   GV+ T++T+N ++  L + G+
Sbjct: 340 ERLGTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGK 399

Query: 384 AGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNC 443
              A    +++    + PD+ TYN LID  CK   V +A  L   +     +      N 
Sbjct: 400 LEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNT 459

Query: 444 LIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNG 503
           ++  LCK  R ++A EL H  PQ+G VP  V+Y  ++    ++   E A      M +  
Sbjct: 460 VLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERK 519

Query: 504 CAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKD 558
             P++ T+NTL+ G  +  +  + ++ L++    E+ LVPD+TT++I++    K+
Sbjct: 520 LIPSISTYNTLIKGLCRMERLKEAIDKLNEFV--EKGLVPDETTYNIIIHAYCKE 572



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 94/332 (28%), Positives = 167/332 (50%), Gaps = 3/332 (0%)

Query: 234 LIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRG 293
           L+H  C  G   +       M   G  P+ +T+N +++  C+ G + EA  LL  M + G
Sbjct: 214 LVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDG 273

Query: 294 LNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAM 353
           + P + TYN+L+  +  +G I  A ++  SM + G +  + +YN+L  G C+   V+EA 
Sbjct: 274 IAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAMGLCQAGKVDEAF 333

Query: 354 SLYRQIISNGVR-QTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDG 412
            L  ++   G     V+TYNTL+   F+   +  A +L +EM+   V+P L T+NI++  
Sbjct: 334 RLKDEMERLGTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKS 393

Query: 413 LCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPT 472
           LCK   ++EA+     +        +  +N LID  CKAG +  A+ L  ++  KGL   
Sbjct: 394 LCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMD 453

Query: 473 VVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLH 532
             T + +++ LC+  + E A + L    + G  P+ V++ T+M  + +       + L  
Sbjct: 454 TFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWD 513

Query: 533 KMAEPERNLVPDDTTFSIVVDLLAKDEKYHEC 564
           +M   ER L+P  +T++ ++  L + E+  E 
Sbjct: 514 QMI--ERKLIPSISTYNTLIKGLCRMERLKEA 543



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 95/310 (30%), Positives = 164/310 (52%), Gaps = 5/310 (1%)

Query: 258 GPRPNLLTFNVMIDCLCKG-GKINEAN-GLLELMIQRGLNPDRFTYNSLMDGYCLVGRID 315
           G RP+L   N ++  L +    + +A+  +   +I+  L+P+ +T+N L+  +C  G + 
Sbjct: 166 GVRPSLQAANAVLSALSRSPSTLPQASLDVFRSLIELRLHPNHYTFNLLVHTHCSKGTLA 225

Query: 316 TAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLL 375
            A     +M   G     V+YN L+N +C+   + EA +L  ++  +G+  T  TYNTL+
Sbjct: 226 DALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDGIAPTQPTYNTLV 285

Query: 376 SGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLE-MNKF 434
           S   + G    A K+ + M  Y  EPDL TYN+L  GLC+   V EA +L   +E +   
Sbjct: 286 SAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAMGLCQAGKVDEAFRLKDEMERLGTA 345

Query: 435 EFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKAND 494
              +  +N L+D   K     +A  L  ++  KG+ PT+VT++I++  LC++GKLE+A  
Sbjct: 346 LPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALG 405

Query: 495 FLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDL 554
            L  + + G AP+V+T+NTL+  + +    +K   L+ +M    + L  D  T + V+  
Sbjct: 406 KLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMV--GKGLKMDTFTLNTVLYN 463

Query: 555 LAKDEKYHEC 564
           L K ++Y + 
Sbjct: 464 LCKMKRYEDA 473



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 106/408 (25%), Positives = 181/408 (44%), Gaps = 51/408 (12%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CK G   L EA      +     +P + ++N L  A  K  +     +   ++V  GL  
Sbjct: 395 CKEG--KLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKM 452

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           D  TLN ++         LC   R ++A  L  +    G  PD ++YGT++  + +  N 
Sbjct: 453 DTFTLNTVL-------YNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNP 505

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
             ALRL  +M+    E  LI   +I +Y+ +I  LC+   + +A +   E   +G+ P  
Sbjct: 506 EPALRLWDQMI----ERKLIP--SISTYNTLIKGLCRMERLKEAIDKLNEFVEKGLVPDE 559

Query: 229 VVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLEL 288
                +IH +C  G+ E       +M++   +P+++T N +++ LC  GK+++A  L E 
Sbjct: 560 TTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFES 619

Query: 289 MIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILN 348
            +++G   D  TYN+L+   C VG +DTA   F  M  KG +    +YN++++   +   
Sbjct: 620 WVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGR 679

Query: 349 VEEAMSLYRQIISNG--------------------VRQ----------------TVITYN 372
            EEA ++  ++  +G                    V++                 + TY 
Sbjct: 680 SEEAHNMLHKLADSGKLSQSFACPLLKPSSADEADVKEHEGKPEAESSEKAQDNALETYM 739

Query: 373 TLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQ 420
             L+GL   GQ   A+ + DEM    +  D STY  L++GL K    Q
Sbjct: 740 ERLNGLCTGGQLKEAKAVLDEMMQKGMPVDCSTYITLMEGLIKRQKRQ 787


>gi|302763353|ref|XP_002965098.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
 gi|300167331|gb|EFJ33936.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
          Length = 600

 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 140/487 (28%), Positives = 240/487 (49%), Gaps = 17/487 (3%)

Query: 36  SPETQLNEFLHENCKSGIIN---LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYD 92
           +P+  L+   +     G+ +   ++EA   F  +     SP + ++  +   + K    +
Sbjct: 101 TPKASLDVISYTTVIKGLADSKRIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIE 160

Query: 93  AVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDV 152
             +  + ++     +P   T  ++I+       GLC    + +A  +F+ M+  G  PD 
Sbjct: 161 DGLKNFEEMSGSSCVPTRTTYTVVID-------GLCKAQMLPDACKVFEQMVQKGCVPDT 213

Query: 153 ITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKA 212
           ITY TLI+GF +   +  A +L   M++   E   ++      Y  I+   CK  ++++A
Sbjct: 214 ITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVT------YGSIVHGFCKLDMINEA 267

Query: 213 KELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDC 272
           KE+  +M+ RG  P + + T+L+  +   G  EE   +  EM   G  P+++ +  +ID 
Sbjct: 268 KEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDL 327

Query: 273 LCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHT 332
           L   G++ EA  + + MI++G  PD  TY +++  +  +G ++ A EI   M   G    
Sbjct: 328 LFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPD 387

Query: 333 VVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFD 392
             +YN L++GY K+  V++A  +Y +++++G++   +T+N L+ GLF+ G+   A  LF 
Sbjct: 388 CFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFK 447

Query: 393 EM-KLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKA 451
           EM +   V P L +Y ILIDGL K   V EA   F  +           +  LI  L KA
Sbjct: 448 EMLEKEEVPPTLVSYTILIDGLGKAGRVSEAFLQFQEMIDRGIIPECHTYTSLIYSLAKA 507

Query: 452 GRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTF 511
           GR+  A +L   + + G+ P V  YS +I GL     ++ A D    M K GCAPN VT+
Sbjct: 508 GRIPEAKKLVEDMVKLGVNPDVQAYSALITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTY 567

Query: 512 NTLMHGF 518
             L  GF
Sbjct: 568 KVLRRGF 574



 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 140/493 (28%), Positives = 230/493 (46%), Gaps = 22/493 (4%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
           P I S+N +   +A     D    F+  ++  G  PD +    LI+ F    +       
Sbjct: 5   PTIVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHKL 64

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKT- 191
           + +A   F        RPDV  Y ++I+G+C+ G+L              Y   +  K  
Sbjct: 65  LNQALKRF--------RPDVFLYTSVIHGYCKAGDLDTG-----------YFRAVTPKAS 105

Query: 192 -NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGL 250
            ++ SY+ +I  L     +D+A ELF E+K  G +P VV  T +I G   AG  E+    
Sbjct: 106 LDVISYTTVIKGLADSKRIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKN 165

Query: 251 FIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCL 310
           F EM      P   T+ V+ID LCK   + +A  + E M+Q+G  PD  TY +L+DG+  
Sbjct: 166 FEEMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSK 225

Query: 311 VGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVIT 370
             ++D AR++   M +KG + T V+Y  +++G+CK+  + EA  +  Q+   G    +  
Sbjct: 226 ASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFI 285

Query: 371 YNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLE 430
           + +LLS     G+A  A ++  EM      PD+  Y  LID L     V EA  +F  + 
Sbjct: 286 FTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMI 345

Query: 431 MNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLE 490
                     +  +I    K G ++ A E+   + + G+ P    Y+ ++ G  +  +++
Sbjct: 346 EKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVD 405

Query: 491 KANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSI 550
           +A      M  +G  PN VTFN LMHG  ++ KT +   L  +M E E  + P   +++I
Sbjct: 406 QAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKE-EVPPTLVSYTI 464

Query: 551 VVDLLAKDEKYHE 563
           ++D L K  +  E
Sbjct: 465 LIDGLGKAGRVSE 477



 Score =  218 bits (556), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 136/510 (26%), Positives = 241/510 (47%), Gaps = 25/510 (4%)

Query: 45  LHENCKSGIINLNEARYFFGYMTHMQPSPPIS--SFNLLFGAVAKNRHYDAVISFYRKLV 102
           +H  CK+G ++        GY   + P   +   S+  +   +A ++  D     + +L 
Sbjct: 83  IHGYCKAGDLDT-------GYFRAVTPKASLDVISYTTVIKGLADSKRIDEACELFEELK 135

Query: 103 SIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGF 162
           + G  P+ +    +I+       GL    RI++    F+ M      P   TY  +I+G 
Sbjct: 136 TAGCSPNVVAYTAVID-------GLLKAGRIEDGLKNFEEMSGSSCVPTRTTYTVVIDGL 188

Query: 163 CRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGR 222
           C+   L  A ++ ++MV    + G +  T   +Y+ +ID   K   +D+A++L   M  +
Sbjct: 189 CKAQMLPDACKVFEQMV----QKGCVPDT--ITYTTLIDGFSKASKMDEARKLLDVMLTK 242

Query: 223 GINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEA 282
           G  P  V   +++HGFC      E   +  +M + G  P L  F  ++      G+  EA
Sbjct: 243 GPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEA 302

Query: 283 NGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILING 342
             +L  M  RG  PD   Y SL+D     GR+  AR +F SM  KGC    ++Y  +I  
Sbjct: 303 YQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQN 362

Query: 343 YCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPD 402
           + KI NVE A  +   +  +GV      YN+L+ G  +  +   A  ++D M    ++P+
Sbjct: 363 FSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPN 422

Query: 403 LSTYNILIDGLCKNNCVQEAVKLF-HMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELF 461
             T+N+L+ GL K+     A  LF  MLE  +    +  +  LIDGL KAGR+  A+  F
Sbjct: 423 AVTFNVLMHGLFKDGKTDRAFSLFKEMLEKEEVPPTLVSYTILIDGLGKAGRVSEAFLQF 482

Query: 462 HKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQN 521
            ++  +G++P   TY+ +I+ L + G++ +A   +  M K G  P+V  ++ L+ G + +
Sbjct: 483 QEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGLIDS 542

Query: 522 NKTSKVVELLHKMAEPERNLVPDDTTFSIV 551
           +      ++  +M   +R   P++ T+ ++
Sbjct: 543 SMVDTAWDVFQEMM--KRGCAPNEVTYKVL 570



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 111/423 (26%), Positives = 204/423 (48%), Gaps = 16/423 (3%)

Query: 147 GVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKE 206
           G  P +++Y T+I+G      +  A +    M+    +NG   + ++ +++ +I   CK 
Sbjct: 2   GCEPTIVSYNTVISGLASIDKMDEAYKFFNSMI----DNG--CEPDVIAFTTLIHGFCKA 55

Query: 207 GLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNL--L 264
           G      +L  +   R   P V + T++IHG+C AG+ +   G F  +    P+ +L  +
Sbjct: 56  GQPQVGHKLLNQALKR-FRPDVFLYTSVIHGYCKAGDLD--TGYFRAVT---PKASLDVI 109

Query: 265 TFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSM 324
           ++  +I  L    +I+EA  L E +   G +P+   Y +++DG    GRI+   + F  M
Sbjct: 110 SYTTVIKGLADSKRIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEM 169

Query: 325 HSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQA 384
               C  T  +Y ++I+G CK   + +A  ++ Q++  G     ITY TL+ G  +A + 
Sbjct: 170 SGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKM 229

Query: 385 GYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCL 444
             A+KL D M     EP   TY  ++ G CK + + EA ++   +     E G+ IF  L
Sbjct: 230 DEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSL 289

Query: 445 IDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGC 504
           +      GR + A+++  ++  +G  P V+ Y+ +I  L   G++ +A      M + GC
Sbjct: 290 LSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGC 349

Query: 505 APNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHEC 564
           AP+ +T+ T++  F +        E+L  MA  +  + PD   ++ ++D   K E+  + 
Sbjct: 350 APDALTYGTIIQNFSKIGNVEAAGEILELMA--KSGVGPDCFAYNSLMDGYVKLERVDQA 407

Query: 565 SAV 567
             V
Sbjct: 408 FGV 410



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 97/341 (28%), Positives = 156/341 (45%), Gaps = 16/341 (4%)

Query: 45  LHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSI 104
           +H  CK  +IN  EA+     M      P +  F  L          +       ++ + 
Sbjct: 255 VHGFCKLDMIN--EAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTAR 312

Query: 105 GLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCR 164
           G  PD +    LI+        L    R+ EA  +F +MI  G  PD +TYGT+I  F +
Sbjct: 313 GCAPDVILYTSLIDL-------LFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSK 365

Query: 165 TGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGI 224
            GN+  A  + + M     ++G+    + F+Y+ ++D   K   VD+A  ++  M   GI
Sbjct: 366 IGNVEAAGEILELMA----KSGV--GPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGI 419

Query: 225 NPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGP-RPNLLTFNVMIDCLCKGGKINEAN 283
            P  V    L+HG    G  +    LF EML+     P L+++ ++ID L K G+++EA 
Sbjct: 420 KPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKEEVPPTLVSYTILIDGLGKAGRVSEAF 479

Query: 284 GLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGY 343
              + MI RG+ P+  TY SL+      GRI  A+++   M   G    V +Y+ LI G 
Sbjct: 480 LQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGL 539

Query: 344 CKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQA 384
                V+ A  ++++++  G     +TY  L  G   AG+A
Sbjct: 540 IDSSMVDTAWDVFQEMMKRGCAPNEVTYKVLRRGFRAAGRA 580


>gi|224135613|ref|XP_002322117.1| predicted protein [Populus trichocarpa]
 gi|222869113|gb|EEF06244.1| predicted protein [Populus trichocarpa]
          Length = 854

 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 147/519 (28%), Positives = 276/519 (53%), Gaps = 18/519 (3%)

Query: 55  NLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLN 114
           ++  A  +F  +  + P P + +F+ L  A  K  + D     +  +   G+ PD +  +
Sbjct: 287 DIGVADDYFNMVVRIGPKPNVVTFSTLIDAYCKEGNLDKAFVLFDVMAGNGVTPDLIVYS 346

Query: 115 ILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRL 174
           ILI+       GL    R+++   L    +  G++ DV+ + + ++ + + G+L   +++
Sbjct: 347 ILID-------GLFKAGRLEDGQRLLLVALDKGIKLDVVGFSSAMDAYVKIGDLGRVIQI 399

Query: 175 HKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTL 234
           +K+M+     N  IS  N+ S SI+I   C+ G + +A  LF+++   G  P+++  + L
Sbjct: 400 YKRML-----NEGIS-PNVVSCSILIKGFCQNGRILEACGLFVQILKLGFEPSILTYSAL 453

Query: 235 IHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGL 294
           I GFC +GN  +   L+ +M+     P+ + ++V+I+ LCK G + +A       + RGL
Sbjct: 454 IAGFCKSGNLRDGFYLYEDMIKKRCEPDTIVYSVLINGLCKQGLVGDALRFFFQAVNRGL 513

Query: 295 NPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMS 354
           +P+ FT N+L+D +C +  I  A +++  M     K   V+Y ILI G  +   V+EA+ 
Sbjct: 514 SPNVFTLNTLLDSFCRLKCIVGAMKVYYLMGMLNIKADTVTYTILIKGAAQFGRVDEALM 573

Query: 355 LYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLC 414
           L+ Q++    +  VITY TL+ GL +  ++     +FD M    V PD++ YN+LI+   
Sbjct: 574 LFFQMLKKDFKPDVITYCTLIDGLCKLKKSSAGLCIFDFMCKNAVAPDIAIYNVLINMHS 633

Query: 415 KNNCVQEAVKLF-HMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTV 473
           +   ++ A+ LF H++E    +  +  FN +I   C   RLD+A +LF K+  + L P  
Sbjct: 634 REGHLEAALGLFVHVVERGP-KPDVFTFNTMICCYCNFKRLDDAVQLFAKMTSEQLRPNA 692

Query: 474 VTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKV-VELLH 532
           +T++I+I   CR+G+++ A      M + G  PN+VT++ L+HG+ ++    +  ++L +
Sbjct: 693 ITFTILIDAFCREGRMDDAMLMFSKMLEEGPEPNLVTYSCLIHGYFKSQSMMESGLKLYN 752

Query: 533 KMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKSS 571
           +M   E N+ P+  ++SI++D L K     E S   + +
Sbjct: 753 EML--ENNIAPNIVSYSILIDGLCKRGLMKEASCAFRCA 789



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 126/454 (27%), Positives = 236/454 (51%), Gaps = 20/454 (4%)

Query: 94  VISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVI 153
           VI  Y+++++ G+ P+ ++ +ILI       +G C   RI EA  LF  ++  G  P ++
Sbjct: 396 VIQIYKRMLNEGISPNVVSCSILI-------KGFCQNGRILEACGLFVQILKLGFEPSIL 448

Query: 154 TYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAK 213
           TY  LI GFC++GNL     L++ M+    E   I       YS++I+ LCK+GLV  A 
Sbjct: 449 TYSALIAGFCKSGNLRDGFYLYEDMIKKRCEPDTIV------YSVLINGLCKQGLVGDAL 502

Query: 214 ELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCL 273
             F +   RG++P V    TL+  FC          ++  M  L  + + +T+ ++I   
Sbjct: 503 RFFFQAVNRGLSPNVFTLNTLLDSFCRLKCIVGAMKVYYLMGMLNIKADTVTYTILIKGA 562

Query: 274 CKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTV 333
            + G+++EA  L   M+++   PD  TY +L+DG C + +      IF  M        +
Sbjct: 563 AQFGRVDEALMLFFQMLKKDFKPDVITYCTLIDGLCKLKKSSAGLCIFDFMCKNAVAPDI 622

Query: 334 VSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDE 393
             YN+LIN + +  ++E A+ L+  ++  G +  V T+NT++       +   A +LF +
Sbjct: 623 AIYNVLINMHSREGHLEAALGLFVHVVERGPKPDVFTFNTMICCYCNFKRLDDAVQLFAK 682

Query: 394 MKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKA-G 452
           M    + P+  T+ ILID  C+   + +A+ +F  +     E  +  ++CLI G  K+  
Sbjct: 683 MTSEQLRPNAITFTILIDAFCREGRMDDAMLMFSKMLEEGPEPNLVTYSCLIHGYFKSQS 742

Query: 453 RLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKAN-DFLLYMEKNGCAPNVVTF 511
            +++  +L++++ +  + P +V+YSI+I GLC++G +++A+  F   ++K+   P+V+ +
Sbjct: 743 MMESGLKLYNEMLENNIAPNIVSYSILIDGLCKRGLMKEASCAFRCALDKH-LLPDVIAY 801

Query: 512 NTLMHGFLQNNKTSKVVELLHKM----AEPERNL 541
             L+ G+ +  + ++ + L   M      P+R L
Sbjct: 802 TILIRGYCKVGRLTEAMMLYDNMLLNRLTPDRFL 835



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 136/522 (26%), Positives = 245/522 (46%), Gaps = 56/522 (10%)

Query: 80  LLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWL 139
           LL G++  +   + ++  Y +L S      F     ++N F NK         ++     
Sbjct: 207 LLLGSLIDSHCVEVIVDKYGELCSAMREQPFSVYEFVMNRFMNK-------GEVEMGLRF 259

Query: 140 FKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLIS---KTNIFSY 196
            K ++  G   D+IT   ++ G     ++ VA          DY N ++    K N+ ++
Sbjct: 260 HKALVQGGFGLDIITCNKILKGIWMQNDIGVA---------DDYFNMVVRIGPKPNVVTF 310

Query: 197 SIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLD 256
           S +ID+ CKEG +DKA  LF  M G G+ P ++V + LI G   AG  E+   L +  LD
Sbjct: 311 STLIDAYCKEGNLDKAFVLFDVMAGNGVTPDLIVYSILIDGLFKAGRLEDGQRLLLVALD 370

Query: 257 LGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDT 316
            G + +++ F+  +D   K G +     + + M+  G++P+  + + L+ G+C  GRI  
Sbjct: 371 KGIKLDVVGFSSAMDAYVKIGDLGRVIQIYKRMLNEGISPNVVSCSILIKGFCQNGRILE 430

Query: 317 AREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLS 376
           A  +F+ +   G + ++++Y+ LI G+CK  N+ +   LY  +I        I Y+ L++
Sbjct: 431 ACGLFVQILKLGFEPSILTYSALIAGFCKSGNLRDGFYLYEDMIKKRCEPDTIVYSVLIN 490

Query: 377 GLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEF 436
           GL + G  G A + F +     + P++ T N L+D  C+  C+  A+K+++++ M   + 
Sbjct: 491 GLCKQGLVGDALRFFFQAVNRGLSPNVFTLNTLLDSFCRLKCIVGAMKVYYLMGMLNIKA 550

Query: 437 GIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLC------------ 484
               +  LI G  + GR+D A  LF ++ +K   P V+TY  +I GLC            
Sbjct: 551 DTVTYTILIKGAAQFGRVDEALMLFFQMLKKDFKPDVITYCTLIDGLCKLKKSSAGLCIF 610

Query: 485 -----------------------RKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQN 521
                                  R+G LE A    +++ + G  P+V TFNT++  +   
Sbjct: 611 DFMCKNAVAPDIAIYNVLINMHSREGHLEAALGLFVHVVERGPKPDVFTFNTMICCYCNF 670

Query: 522 NKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
            +    V+L  KM   +  L P+  TF+I++D   ++ +  +
Sbjct: 671 KRLDDAVQLFAKMTSEQ--LRPNAITFTILIDAFCREGRMDD 710



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 111/386 (28%), Positives = 190/386 (49%), Gaps = 16/386 (4%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CKSG  NL +  Y +  M   +  P    +++L   + K       + F+ + V+ GL P
Sbjct: 458 CKSG--NLRDGFYLYEDMIKKRCEPDTIVYSVLINGLCKQGLVGDALRFFFQAVNRGLSP 515

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           +  TLN L++ F       C    I  A  ++  M    ++ D +TY  LI G  + G +
Sbjct: 516 NVFTLNTLLDSF-------CRLKCIVGAMKVYYLMGMLNIKADTVTYTILIKGAAQFGRV 568

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
             AL L  +M+  D+      K ++ +Y  +ID LCK         +F  M    + P +
Sbjct: 569 DEALMLFFQMLKKDF------KPDVITYCTLIDGLCKLKKSSAGLCIFDFMCKNAVAPDI 622

Query: 229 VVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLEL 288
            +   LI+     G+ E   GLF+ +++ GP+P++ TFN MI C C   ++++A  L   
Sbjct: 623 AIYNVLINMHSREGHLEAALGLFVHVVERGPKPDVFTFNTMICCYCNFKRLDDAVQLFAK 682

Query: 289 MIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILN 348
           M    L P+  T+  L+D +C  GR+D A  +F  M  +G +  +V+Y+ LI+GY K  +
Sbjct: 683 MTSEQLRPNAITFTILIDAFCREGRMDDAMLMFSKMLEEGPEPNLVTYSCLIHGYFKSQS 742

Query: 349 V-EEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYN 407
           + E  + LY +++ N +   +++Y+ L+ GL + G    A   F      ++ PD+  Y 
Sbjct: 743 MMESGLKLYNEMLENNIAPNIVSYSILIDGLCKRGLMKEASCAFRCALDKHLLPDVIAYT 802

Query: 408 ILIDGLCKNNCVQEAVKLFHMLEMNK 433
           ILI G CK   + EA+ L+  + +N+
Sbjct: 803 ILIRGYCKVGRLTEAMMLYDNMLLNR 828



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 112/443 (25%), Positives = 207/443 (46%), Gaps = 43/443 (9%)

Query: 153 ITYGTLINGFCRTG--NLSVALRLHKKMVSGDYENGLISKTNIFSYSI--IIDSLCKEGL 208
           + YG LI  +CR G  + SV + +H  +       G+    N+    +  +IDS C E +
Sbjct: 168 VVYGFLIESYCRKGMFDKSVDIFMHVCV------KGIFVSPNVVYLLLGSLIDSHCVEVI 221

Query: 209 VDKAKELFLEMKGR-------------------------------GINPAVVVCTTLIHG 237
           VDK  EL   M+ +                               G    ++ C  ++ G
Sbjct: 222 VDKYGELCSAMREQPFSVYEFVMNRFMNKGEVEMGLRFHKALVQGGFGLDIITCNKILKG 281

Query: 238 FCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPD 297
                +    +  F  ++ +GP+PN++TF+ +ID  CK G +++A  L ++M   G+ PD
Sbjct: 282 IWMQNDIGVADDYFNMVVRIGPKPNVVTFSTLIDAYCKEGNLDKAFVLFDVMAGNGVTPD 341

Query: 298 RFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYR 357
              Y+ L+DG    GR++  + + L    KG K  VV ++  ++ Y KI ++   + +Y+
Sbjct: 342 LIVYSILIDGLFKAGRLEDGQRLLLVALDKGIKLDVVGFSSAMDAYVKIGDLGRVIQIYK 401

Query: 358 QIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNN 417
           ++++ G+   V++ + L+ G  Q G+   A  LF ++     EP + TY+ LI G CK+ 
Sbjct: 402 RMLNEGISPNVVSCSILIKGFCQNGRILEACGLFVQILKLGFEPSILTYSALIAGFCKSG 461

Query: 418 CVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYS 477
            +++   L+  +   + E    +++ LI+GLCK G + +A   F +   +GL P V T +
Sbjct: 462 NLRDGFYLYEDMIKKRCEPDTIVYSVLINGLCKQGLVGDALRFFFQAVNRGLSPNVFTLN 521

Query: 478 IMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEP 537
            ++   CR   +  A      M       + VT+  L+ G  Q  +  + + L  +M   
Sbjct: 522 TLLDSFCRLKCIVGAMKVYYLMGMLNIKADTVTYTILIKGAAQFGRVDEALMLFFQML-- 579

Query: 538 ERNLVPDDTTFSIVVDLLAKDEK 560
           +++  PD  T+  ++D L K +K
Sbjct: 580 KKDFKPDVITYCTLIDGLCKLKK 602



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 72/243 (29%), Positives = 121/243 (49%), Gaps = 14/243 (5%)

Query: 63  FGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGN 122
           F +M     +P I+ +N+L    ++  H +A +  +  +V  G  PD  T N +I C+  
Sbjct: 610 FDFMCKNAVAPDIAIYNVLINMHSREGHLEAALGLFVHVVERGPKPDVFTFNTMICCY-- 667

Query: 123 KERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGD 182
                C   R+ +A  LF  M +  +RP+ IT+  LI+ FCR G +  A+ +  KM+   
Sbjct: 668 -----CNFKRLDDAVQLFAKMTSEQLRPNAITFTILIDAFCREGRMDDAMLMFSKML--- 719

Query: 183 YENGLISKTNIFSYSIIIDSLCK-EGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCA 241
            E G   + N+ +YS +I    K + +++   +L+ EM    I P +V  + LI G C  
Sbjct: 720 -EEG--PEPNLVTYSCLIHGYFKSQSMMESGLKLYNEMLENNIAPNIVSYSILIDGLCKR 776

Query: 242 GNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTY 301
           G  +E +  F   LD    P+++ + ++I   CK G++ EA  L + M+   L PDRF  
Sbjct: 777 GLMKEASCAFRCALDKHLLPDVIAYTILIRGYCKVGRLTEAMMLYDNMLLNRLTPDRFLE 836

Query: 302 NSL 304
            +L
Sbjct: 837 RTL 839


>gi|357111070|ref|XP_003557338.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Brachypodium distachyon]
          Length = 878

 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 154/574 (26%), Positives = 265/574 (46%), Gaps = 74/574 (12%)

Query: 55  NLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIG--------- 105
            L +A    G M H++  PP S++ +L GA+A+ R  +  +   R++  +G         
Sbjct: 156 RLEDAFRVIGAMRHLKFRPPFSAYTVLIGALAEARQPERALELLRQMQDVGYEVSVPLFT 215

Query: 106 --------------------------LLPDFLTLNILINCFGNKERGLCVENRIKEATWL 139
                                     L PD +  N+ I+CFG           +  A   
Sbjct: 216 TLVRALAREGQMEPALALVDEVKGSCLEPDIVLYNVCIDCFGKA-------GSVDMAWKF 268

Query: 140 FKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRL---------------HKKMVSG--- 181
           F  + A G+RPD ++Y +++   C+ G L  A  L               +  M+ G   
Sbjct: 269 FHELKAHGLRPDDVSYTSMVWVLCKAGRLGEAEELFGQMEAERDVPCAYAYNTMIMGYGS 328

Query: 182 ----DYENGLISK-------TNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVV 230
               D    L+ +        ++ S++ I+  L K+  VD+A  LF  MK +   P +  
Sbjct: 329 AERFDDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALTLFDVMK-KDAKPNIST 387

Query: 231 CTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMI 290
              +I   C AG   E   +  EM   G  PNLL+ N+M+D LCK  ++ EA+ + E   
Sbjct: 388 YNIIIDMLCMAGRVNEAYKIRDEMELAGLFPNLLSVNIMVDRLCKANQLEEAHRIFESAS 447

Query: 291 QRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVE 350
           +RG NP+  TY SL+DG    G+ID A  +F  M   G     + Y  LI  +      E
Sbjct: 448 ERGCNPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAGHDANPIIYTSLIRNFFMHGRKE 507

Query: 351 EAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILI 410
           +   +Y+++I  G R  +   NT +  +F+AG+    + +F++MK +   PD+ +Y+ILI
Sbjct: 508 DGHKIYKEMIRRGGRPDLTLLNTYMDCVFKAGEVEKGRAIFEDMKSFGFLPDVRSYSILI 567

Query: 411 DGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLV 470
            GL K    +E   +F  +    F      +N ++DGLCK+G++D A+E+  ++  K + 
Sbjct: 568 HGLTKAGQARETSNIFQAMSQQGFALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVKHVH 627

Query: 471 PTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVEL 530
           PTV TY  ++ GL +  +L++A       +  G   NV+ +++L+ GF +  +  +   +
Sbjct: 628 PTVATYGSIVDGLAKIDRLDEAYMLFEEAKSKGIELNVILYSSLIDGFGKVGRIDEAYLI 687

Query: 531 LHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHEC 564
           L +M   ++ L P+  T++ ++D L K E+  E 
Sbjct: 688 LEEMM--KKGLTPNVYTWNSLMDALVKTEEIDEA 719



 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 153/563 (27%), Positives = 258/563 (45%), Gaps = 54/563 (9%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CK+G   L EA   FG M   +  P   ++N +         +D       +L   G +P
Sbjct: 292 CKAG--RLGEAEELFGQMEAERDVPCAYAYNTMIMGYGSAERFDDAYKLLERLRERGCIP 349

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
             ++ N ++ C G K        ++ EA  LF +++    +P++ TY  +I+  C  G +
Sbjct: 350 SVVSFNSILTCLGKK-------RKVDEALTLF-DVMKKDAKPNISTYNIIIDMLCMAGRV 401

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
           + A ++  +M       GL    N+ S +I++D LCK   +++A  +F     RG NP  
Sbjct: 402 NEAYKIRDEMELA----GLFP--NLLSVNIMVDRLCKANQLEEAHRIFESASERGCNPNS 455

Query: 229 VVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLEL 288
           V   +LI G    G  ++   LF +MLD G   N + +  +I      G+  + + + + 
Sbjct: 456 VTYCSLIDGLGKKGKIDDAYRLFEKMLDAGHDANPIIYTSLIRNFFMHGRKEDGHKIYKE 515

Query: 289 MIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILN 348
           MI+RG  PD    N+ MD     G ++  R IF  M S G    V SY+ILI+G  K   
Sbjct: 516 MIRRGGRPDLTLLNTYMDCVFKAGEVEKGRAIFEDMKSFGFLPDVRSYSILIHGLTKAGQ 575

Query: 349 VEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNI 408
             E  ++++ +   G       YN ++ GL ++G+   A ++ +EMK+ +V P ++TY  
Sbjct: 576 ARETSNIFQAMSQQGFALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVKHVHPTVATYGS 635

Query: 409 LIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKG 468
           ++DGL K + + EA  LF   +    E  + +++ LIDG  K GR+D A+ +  ++ +KG
Sbjct: 636 IVDGLAKIDRLDEAYMLFEEAKSKGIELNVILYSSLIDGFGKVGRIDEAYLILEEMMKKG 695

Query: 469 LVPTV-----------------------------------VTYSIMIHGLCRKGKLEKAN 493
           L P V                                    TYSI+I+GLCR  K  KA 
Sbjct: 696 LTPNVYTWNSLMDALVKTEEIDEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAF 755

Query: 494 DFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
            F   M+K G  PNVVT+ T++ G  +    +    L  +        +PD  +F+ +++
Sbjct: 756 VFWQEMQKQGLIPNVVTYTTMISGLAKVGNITDAYSLFERFK--TNGGIPDSASFNALIE 813

Query: 554 LLAKDEKYHECSAV-SKSSYRAC 575
            ++   +  E   V  ++  R C
Sbjct: 814 GMSNANRPMEAYQVFEETRLRGC 836



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 132/499 (26%), Positives = 234/499 (46%), Gaps = 40/499 (8%)

Query: 55  NLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLN 114
            ++EA   F  M      P IS++N++   +      +       ++   GL P+ L++N
Sbjct: 366 KVDEALTLFDVMKK-DAKPNISTYNIIIDMLCMAGRVNEAYKIRDEMELAGLFPNLLSVN 424

Query: 115 ILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRL 174
           I+++        LC  N+++EA  +F++    G  P+ +TY +LI+G  + G +  A RL
Sbjct: 425 IMVD-------RLCKANQLEEAHRIFESASERGCNPNSVTYCSLIDGLGKKGKIDDAYRL 477

Query: 175 HKKMVSGDYENGLISKT----NIFSY-------------------------SIIIDSLCK 205
            +KM+   ++   I  T    N F +                         +  +D + K
Sbjct: 478 FEKMLDAGHDANPIIYTSLIRNFFMHGRKEDGHKIYKEMIRRGGRPDLTLLNTYMDCVFK 537

Query: 206 EGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLT 265
            G V+K + +F +MK  G  P V   + LIHG   AG   E + +F  M   G   +   
Sbjct: 538 AGEVEKGRAIFEDMKSFGFLPDVRSYSILIHGLTKAGQARETSNIFQAMSQQGFALDARA 597

Query: 266 FNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMH 325
           +N ++D LCK GK+++A  +LE M  + ++P   TY S++DG   + R+D A  +F    
Sbjct: 598 YNAVVDGLCKSGKVDKAYEVLEEMKVKHVHPTVATYGSIVDGLAKIDRLDEAYMLFEEAK 657

Query: 326 SKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAG 385
           SKG +  V+ Y+ LI+G+ K+  ++EA  +  +++  G+   V T+N+L+  L +  +  
Sbjct: 658 SKGIELNVILYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKTEEID 717

Query: 386 YAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLI 445
            A   F  MK     P+  TY+ILI+GLC+     +A   +  ++       +  +  +I
Sbjct: 718 EALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLIPNVVTYTTMI 777

Query: 446 DGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCA 505
            GL K G + +A+ LF +    G +P   +++ +I G+    +  +A          GC 
Sbjct: 778 SGLAKVGNITDAYSLFERFKTNGGIPDSASFNALIEGMSNANRPMEAYQVFEETRLRGCR 837

Query: 506 PNVVTFNTLMHGFLQNNKT 524
            NV T  +L+      NKT
Sbjct: 838 LNVKTCISLLDAL---NKT 853



 Score =  181 bits (460), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 109/363 (30%), Positives = 180/363 (49%), Gaps = 19/363 (5%)

Query: 98  YRKLVSIGLLPDFLTLNILINCF---GNKERGLCVENRIKEATWLFKNMIAFGVRPDVIT 154
           Y++++  G  PD   LN  ++C    G  E+G  +          F++M +FG  PDV +
Sbjct: 513 YKEMIRRGGRPDLTLLNTYMDCVFKAGEVEKGRAI----------FEDMKSFGFLPDVRS 562

Query: 155 YGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKE 214
           Y  LI+G  + G       + + M    +        +  +Y+ ++D LCK G VDKA E
Sbjct: 563 YSILIHGLTKAGQARETSNIFQAMSQQGF------ALDARAYNAVVDGLCKSGKVDKAYE 616

Query: 215 LFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLC 274
           +  EMK + ++P V    +++ G       +E   LF E    G   N++ ++ +ID   
Sbjct: 617 VLEEMKVKHVHPTVATYGSIVDGLAKIDRLDEAYMLFEEAKSKGIELNVILYSSLIDGFG 676

Query: 275 KGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVV 334
           K G+I+EA  +LE M+++GL P+ +T+NSLMD       ID A   F SM    C     
Sbjct: 677 KVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKTEEIDEALICFQSMKEMKCSPNTY 736

Query: 335 SYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEM 394
           +Y+ILING C++    +A   ++++   G+   V+TY T++SGL + G    A  LF+  
Sbjct: 737 TYSILINGLCRVQKYNKAFVFWQEMQKQGLIPNVVTYTTMISGLAKVGNITDAYSLFERF 796

Query: 395 KLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRL 454
           K     PD +++N LI+G+   N   EA ++F    +      ++    L+D L K   L
Sbjct: 797 KTNGGIPDSASFNALIEGMSNANRPMEAYQVFEETRLRGCRLNVKTCISLLDALNKTECL 856

Query: 455 DNA 457
           + A
Sbjct: 857 EQA 859



 Score =  135 bits (340), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 88/347 (25%), Positives = 164/347 (47%), Gaps = 1/347 (0%)

Query: 197 SIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLD 256
           + ++ +L +   ++ A  +   M+     P     T LI     A   E    L  +M D
Sbjct: 145 AALVATLVRSRRLEDAFRVIGAMRHLKFRPPFSAYTVLIGALAEARQPERALELLRQMQD 204

Query: 257 LGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDT 316
           +G   ++  F  ++  L + G++  A  L++ +    L PD   YN  +D +   G +D 
Sbjct: 205 VGYEVSVPLFTTLVRALAREGQMEPALALVDEVKGSCLEPDIVLYNVCIDCFGKAGSVDM 264

Query: 317 AREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLS 376
           A + F  + + G +   VSY  ++   CK   + EA  L+ Q+ +         YNT++ 
Sbjct: 265 AWKFFHELKAHGLRPDDVSYTSMVWVLCKAGRLGEAEELFGQMEAERDVPCAYAYNTMIM 324

Query: 377 GLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEF 436
           G   A +   A KL + ++     P + ++N ++  L K   V EA+ LF +++ +  + 
Sbjct: 325 GYGSAERFDDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALTLFDVMKKDA-KP 383

Query: 437 GIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFL 496
            I  +N +ID LC AGR++ A+++  ++   GL P +++ +IM+  LC+  +LE+A+   
Sbjct: 384 NISTYNIIIDMLCMAGRVNEAYKIRDEMELAGLFPNLLSVNIMVDRLCKANQLEEAHRIF 443

Query: 497 LYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVP 543
               + GC PN VT+ +L+ G  +  K      L  KM +   +  P
Sbjct: 444 ESASERGCNPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAGHDANP 490


>gi|255556189|ref|XP_002519129.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223541792|gb|EEF43340.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 643

 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 140/489 (28%), Positives = 244/489 (49%), Gaps = 17/489 (3%)

Query: 78  FNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEAT 137
           F++L  A  + +  D     +  +   G++P   T N +++ F        ++    E  
Sbjct: 169 FDMLIRACCELKRGDDAFECFDMMKEKGVVPKIETFNAMLSLF--------LKLNQTETV 220

Query: 138 W-LFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSY 196
           W L+  M    ++  V T+  +IN  C+ G L  A     K   G  EN L  K N+ +Y
Sbjct: 221 WVLYAEMFRLKIKSTVYTFNIMINVLCKEGKLKKA-----KDFIGSMEN-LGVKPNVVTY 274

Query: 197 SIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLD 256
           + +I   C  G V+ A+ +   MK RG+ P      +LI G C  G  EE +G+  +M +
Sbjct: 275 NTVIHGYCSRGRVEGARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKE 334

Query: 257 LGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDT 316
           +G  P  +T+N +ID  C  G + +A G  + M++R + P   TYN L+    L G++D 
Sbjct: 335 IGLLPTAVTYNTLIDGYCNKGDLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDE 394

Query: 317 AREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLS 376
           A  +   M   G     ++YNILINGYC+  N ++A +L+ ++IS G++ T++TY +L+ 
Sbjct: 395 ADGMIKDMGDSGIVPDSITYNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIY 454

Query: 377 GLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEF 436
            L +  +   A  LF+++      PDL  +N LIDG C N  +  A  L   ++      
Sbjct: 455 VLSKRNRMKAADDLFEKIIREGASPDLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVP 514

Query: 437 GIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFL 496
               +N L+ G C+ G+++ A EL  ++ ++G+ P  ++Y+ +I G  ++G +  A    
Sbjct: 515 DEVTYNTLMQGRCREGKVEEARELLKEMKRRGIRPDHISYNTLISGYSKRGDINDAFTIR 574

Query: 497 LYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLA 556
             M   G  P ++T+N L+ G  +N +     ELL +M    + + PDD+T+  +++ + 
Sbjct: 575 DEMLSIGFNPTLLTYNALIQGLCKNQQGDLAEELLKEMV--SKGITPDDSTYFSLIEGIG 632

Query: 557 KDEKYHECS 565
           K +   E S
Sbjct: 633 KVDDSSEAS 641



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 140/467 (29%), Positives = 234/467 (50%), Gaps = 13/467 (2%)

Query: 63  FGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGN 122
           F  M      P I +FN +     K    + V   Y ++  + +     T NI+IN    
Sbjct: 189 FDMMKEKGVVPKIETFNAMLSLFLKLNQTETVWVLYAEMFRLKIKSTVYTFNIMINV--- 245

Query: 123 KERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGD 182
               LC E ++K+A     +M   GV+P+V+TY T+I+G+C  G +  A     +MV   
Sbjct: 246 ----LCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSRGRVEGA-----RMVLDI 296

Query: 183 YENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAG 242
            +N  + + + ++Y  +I  +CK G +++A  +  +MK  G+ P  V   TLI G+C  G
Sbjct: 297 MKNRGV-EPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNTLIDGYCNKG 355

Query: 243 NWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYN 302
           +  +  G   EM+     P + T+N++I  L   GK++EA+G+++ M   G+ PD  TYN
Sbjct: 356 DLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSGIVPDSITYN 415

Query: 303 SLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISN 362
            L++GYC  G    A  +   M SKG + T+V+Y  LI    K   ++ A  L+ +II  
Sbjct: 416 ILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADDLFEKIIRE 475

Query: 363 GVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEA 422
           G    +I +N L+ G    G    A  L  EM   N+ PD  TYN L+ G C+   V+EA
Sbjct: 476 GASPDLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQGRCREGKVEEA 535

Query: 423 VKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHG 482
            +L   ++          +N LI G  K G +++A+ +  ++   G  PT++TY+ +I G
Sbjct: 536 RELLKEMKRRGIRPDHISYNTLISGYSKRGDINDAFTIRDEMLSIGFNPTLLTYNALIQG 595

Query: 483 LCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVE 529
           LC+  + + A + L  M   G  P+  T+ +L+ G  + + +S+  +
Sbjct: 596 LCKNQQGDLAEELLKEMVSKGITPDDSTYFSLIEGIGKVDDSSEASD 642



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 114/378 (30%), Positives = 195/378 (51%), Gaps = 2/378 (0%)

Query: 196 YSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEML 255
           + ++I + C+    D A E F  MK +G+ P +     ++  F      E V  L+ EM 
Sbjct: 169 FDMLIRACCELKRGDDAFECFDMMKEKGVVPKIETFNAMLSLFLKLNQTETVWVLYAEMF 228

Query: 256 DLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRID 315
            L  +  + TFN+MI+ LCK GK+ +A   +  M   G+ P+  TYN+++ GYC  GR++
Sbjct: 229 RLKIKSTVYTFNIMINVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSRGRVE 288

Query: 316 TAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLL 375
            AR +   M ++G +    +Y  LI+G CK   +EEA  +  ++   G+  T +TYNTL+
Sbjct: 289 GARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNTLI 348

Query: 376 SGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFE 435
            G    G    A    DEM    + P +STYN+LI  L     + EA  +   +  +   
Sbjct: 349 DGYCNKGDLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSGIV 408

Query: 436 FGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDF 495
                +N LI+G C+ G    A+ L  ++  KG+ PT+VTY+ +I+ L ++ +++ A+D 
Sbjct: 409 PDSITYNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADDL 468

Query: 496 LLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLL 555
              + + G +P+++ FN L+ G   N    +   LL +M   +RN+VPD+ T++ ++   
Sbjct: 469 FEKIIREGASPDLIMFNALIDGHCANGNLDRAFALLKEM--DKRNIVPDEVTYNTLMQGR 526

Query: 556 AKDEKYHECSAVSKSSYR 573
            ++ K  E   + K   R
Sbjct: 527 CREGKVEEARELLKEMKR 544



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 105/340 (30%), Positives = 165/340 (48%), Gaps = 15/340 (4%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CK G   L EA      M  +   P   ++N L               +  ++V   +LP
Sbjct: 317 CKGG--KLEEASGILEKMKEIGLLPTAVTYNTLIDGYCNKGDLVKAFGYRDEMVRRAILP 374

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
              T N+LI+        L +E ++ EA  + K+M   G+ PD ITY  LING+CR GN 
Sbjct: 375 TVSTYNLLIH-------ALFLEGKMDEADGMIKDMGDSGIVPDSITYNILINGYCRCGNA 427

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
             A  LH +M+S   +  L+      +Y+ +I  L K   +  A +LF ++   G +P +
Sbjct: 428 KKAFNLHDEMISKGIQPTLV------TYTSLIYVLSKRNRMKAADDLFEKIIREGASPDL 481

Query: 229 VVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLEL 288
           ++   LI G C  GN +    L  EM      P+ +T+N ++   C+ GK+ EA  LL+ 
Sbjct: 482 IMFNALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQGRCREGKVEEARELLKE 541

Query: 289 MIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILN 348
           M +RG+ PD  +YN+L+ GY   G I+ A  I   M S G   T+++YN LI G CK   
Sbjct: 542 MKRRGIRPDHISYNTLISGYSKRGDINDAFTIRDEMLSIGFNPTLLTYNALIQGLCKNQQ 601

Query: 349 VEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQ 388
            + A  L ++++S G+     TY +L+ G+ +   +  A 
Sbjct: 602 GDLAEELLKEMVSKGITPDDSTYFSLIEGIGKVDDSSEAS 641



 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 67/260 (25%), Positives = 128/260 (49%), Gaps = 3/260 (1%)

Query: 310 LVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVI 369
           + G  D   E+ ++    G K ++V +++LI   C++   ++A   +  +   GV   + 
Sbjct: 144 VAGVKDVFHELAITRDRLGTKSSIV-FDMLIRACCELKRGDDAFECFDMMKEKGVVPKIE 202

Query: 370 TYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHML 429
           T+N +LS   +  Q      L+ EM    ++  + T+NI+I+ LCK   +++A      +
Sbjct: 203 TFNAMLSLFLKLNQTETVWVLYAEMFRLKIKSTVYTFNIMINVLCKEGKLKKAKDFIGSM 262

Query: 430 EMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKL 489
           E    +  +  +N +I G C  GR++ A  +   +  +G+ P   TY  +I G+C+ GKL
Sbjct: 263 ENLGVKPNVVTYNTVIHGYCSRGRVEGARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKL 322

Query: 490 EKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFS 549
           E+A+  L  M++ G  P  VT+NTL+ G+       K      +M    R ++P  +T++
Sbjct: 323 EEASGILEKMKEIGLLPTAVTYNTLIDGYCNKGDLVKAFGYRDEMV--RRAILPTVSTYN 380

Query: 550 IVVDLLAKDEKYHECSAVSK 569
           +++  L  + K  E   + K
Sbjct: 381 LLIHALFLEGKMDEADGMIK 400



 Score = 56.6 bits (135), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 39/134 (29%), Positives = 57/134 (42%), Gaps = 9/134 (6%)

Query: 38  ETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISF 97
           E   N  +   C+ G   + EAR     M      P   S+N L    +K    +   + 
Sbjct: 516 EVTYNTLMQGRCREG--KVEEARELLKEMKRRGIRPDHISYNTLISGYSKRGDINDAFTI 573

Query: 98  YRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGT 157
             +++SIG  P  LT N LI       +GLC   +   A  L K M++ G+ PD  TY +
Sbjct: 574 RDEMLSIGFNPTLLTYNALI-------QGLCKNQQGDLAEELLKEMVSKGITPDDSTYFS 626

Query: 158 LINGFCRTGNLSVA 171
           LI G  +  + S A
Sbjct: 627 LIEGIGKVDDSSEA 640


>gi|413953163|gb|AFW85812.1| hypothetical protein ZEAMMB73_202457 [Zea mays]
          Length = 731

 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 143/448 (31%), Positives = 235/448 (52%), Gaps = 22/448 (4%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
           P + ++N +  A++ +    +   F+  ++S G+ P+  T NIL+       R LC    
Sbjct: 154 PSVLAYNAVLLALS-DASLTSARRFFDSMLSDGVAPNVYTYNILV-------RALCGRGH 205

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
            KEA  + ++M   G  P+V+TY TL+  F R G +  A RL   M     E GL  K N
Sbjct: 206 RKEALSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMM----REGGL--KPN 259

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
           + +++ +++ +CK G ++ A+++F EM   G+ P  V   TL+ G+C AG   E   +F 
Sbjct: 260 LVTFNSMVNGMCKAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFA 319

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
           EM   G  P+++TF  +I  +CK G +  A  L+  M +RGL  +  T+ +L+DG+C  G
Sbjct: 320 EMTQKGIMPDVVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKG 379

Query: 313 RIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYN 372
            +D A      M     K +VV YN LINGYC +  ++EA  L  ++ + G++  V+TY+
Sbjct: 380 FLDDALLAVRGMKQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYS 439

Query: 373 TLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMN 432
           T++S   +      A +L  +M    V PD  TY+ LI  LC    + +A    H+L  N
Sbjct: 440 TIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDA----HVLFKN 495

Query: 433 KFEFGIE----IFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGK 488
             + G++     +  LIDG CK G +++A  L  K+ + G++P VVTYS++I+GL +  +
Sbjct: 496 MIKLGLQPDEFTYTSLIDGHCKEGNVESALSLHDKMVKAGVLPDVVTYSVLINGLSKSAR 555

Query: 489 LEKANDFLLYMEKNGCAPNVVTFNTLMH 516
             +A   L  +      P    ++ LMH
Sbjct: 556 AMEAQQLLFKLYHEDPIPANTKYDALMH 583



 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 153/530 (28%), Positives = 244/530 (46%), Gaps = 63/530 (11%)

Query: 55  NLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLN 114
           +L  AR FF  M     +P + ++N+L  A+    H    +S  R +   G  P+ +T N
Sbjct: 170 SLTSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSILRDMRGAGCGPNVVTYN 229

Query: 115 ILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRL 174
            L+  F            +  A  L   M   G++P+++T+ +++NG C+ G +  A ++
Sbjct: 230 TLVAAFFR-------AGEVDGAERLVGMMREGGLKPNLVTFNSMVNGMCKAGKMEDARKV 282

Query: 175 HKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTL 234
             +MV      GL    +  SY+ ++   CK G   +A  +F EM  +GI P VV  T+L
Sbjct: 283 FDEMV----REGL--APDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSL 336

Query: 235 IHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGL 294
           IH  C AGN E    L  +M + G + N +TF  +ID  CK G +++A   +  M Q  +
Sbjct: 337 IHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMKQCRI 396

Query: 295 NPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMS 354
            P    YN+L++GYC+VGR+D ARE+   M +KG K  VV+Y+ +I+ YCK  +   A  
Sbjct: 397 KPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFE 456

Query: 355 LYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLC 414
           L +Q++  GV    ITY++L+  L    +   A  LF  M    ++PD  TY  LIDG C
Sbjct: 457 LNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHC 516

Query: 415 KNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVV 474
           K   V+ A+ L   +        +  ++ LI+GL K+ R   A +L  KL  +  +P   
Sbjct: 517 KEGNVESALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEDPIPANT 576

Query: 475 --------------------------------------------------TYSIMIHGLC 484
                                                              YS++IHG C
Sbjct: 577 KYDALMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHC 636

Query: 485 RKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKM 534
           R G + KA  F   M + G APN  +  +L+ G  +N    +  +++ ++
Sbjct: 637 RAGNVMKALSFHKQMLQGGFAPNSTSTISLIRGLFENGMVVEADQVIQQL 686



 Score =  212 bits (539), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 130/442 (29%), Positives = 224/442 (50%), Gaps = 20/442 (4%)

Query: 147 GVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKE 206
           G  P V+ Y  ++       +L+ A R    M+S    +G+    N+++Y+I++ +LC  
Sbjct: 151 GYVPSVLAYNAVLLAL-SDASLTSARRFFDSMLS----DGV--APNVYTYNILVRALCGR 203

Query: 207 GLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTF 266
           G   +A  +  +M+G G  P VV   TL+  F  AG  +    L   M + G +PNL+TF
Sbjct: 204 GHRKEALSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTF 263

Query: 267 NVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHS 326
           N M++ +CK GK+ +A  + + M++ GL PD  +YN+L+ GYC  G    A  +F  M  
Sbjct: 264 NSMVNGMCKAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQ 323

Query: 327 KGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGY 386
           KG    VV++  LI+  CK  N+E A++L RQ+   G++   +T+  L+ G  + G    
Sbjct: 324 KGIMPDVVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDD 383

Query: 387 AQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLID 446
           A      MK   ++P +  YN LI+G C    + EA +L H +E    +  +  ++ +I 
Sbjct: 384 ALLAVRGMKQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIIS 443

Query: 447 GLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAP 506
             CK     +A+EL  ++ +KG++P  +TYS +I  LC + +L  A+     M K G  P
Sbjct: 444 AYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQP 503

Query: 507 NVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEK------ 560
           +  T+ +L+ G  +       + L  KM +    ++PD  T+S++++ L+K  +      
Sbjct: 504 DEFTYTSLIDGHCKEGNVESALSLHDKMVKA--GVLPDVVTYSVLINGLSKSARAMEAQQ 561

Query: 561 -----YHECSAVSKSSYRACLY 577
                YHE    + + Y A ++
Sbjct: 562 LLFKLYHEDPIPANTKYDALMH 583



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 103/336 (30%), Positives = 177/336 (52%), Gaps = 2/336 (0%)

Query: 251 FIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCL 310
           F  ML  G  PN+ T+N+++  LC  G   EA  +L  M   G  P+  TYN+L+  +  
Sbjct: 178 FDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSILRDMRGAGCGPNVVTYNTLVAAFFR 237

Query: 311 VGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVIT 370
            G +D A  +   M   G K  +V++N ++NG CK   +E+A  ++ +++  G+    ++
Sbjct: 238 AGEVDGAERLVGMMREGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMVREGLAPDGVS 297

Query: 371 YNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLE 430
           YNTL+ G  +AG +  A  +F EM    + PD+ T+  LI  +CK   ++ AV L   + 
Sbjct: 298 YNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLERAVTLVRQMR 357

Query: 431 MNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLE 490
               +     F  LIDG CK G LD+A      + Q  + P+VV Y+ +I+G C  G+++
Sbjct: 358 ERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMKQCRIKPSVVCYNALINGYCMVGRMD 417

Query: 491 KANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSI 550
           +A + L  ME  G  P+VVT++T++  + +N  T    EL  +M E  + ++PD  T+S 
Sbjct: 418 EARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLE--KGVLPDAITYSS 475

Query: 551 VVDLLAKDEKYHECSAVSKSSYRACLYVTIFQPSSL 586
           ++ +L  +++  +   + K+  +  L    F  +SL
Sbjct: 476 LIRVLCGEKRLSDAHVLFKNMIKLGLQPDEFTYTSL 511



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 130/482 (26%), Positives = 216/482 (44%), Gaps = 67/482 (13%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
           N  ++  CK+G   + +AR  F  M     +P   S+N L G   K       +S + ++
Sbjct: 264 NSMVNGMCKAG--KMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEM 321

Query: 102 VSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLING 161
              G++PD +T   LI+        +C    ++ A  L + M   G++ + +T+  LI+G
Sbjct: 322 TQKGIMPDVVTFTSLIHV-------MCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDG 374

Query: 162 FCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKG 221
           FC+ G L  AL   + M           K ++  Y+ +I+  C  G +D+A+EL  EM+ 
Sbjct: 375 FCKKGFLDDALLAVRGMKQCRI------KPSVVCYNALINGYCMVGRMDEARELLHEMEA 428

Query: 222 RGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINE 281
           +G+ P VV  +T+I  +C   +      L  +ML+ G  P+ +T++ +I  LC   ++++
Sbjct: 429 KGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSD 488

Query: 282 ANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILIN 341
           A+ L + MI+ GL PD FTY SL+DG+C  G +++A  +   M   G    VV+Y++LIN
Sbjct: 489 AHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVESALSLHDKMVKAGVLPDVVTYSVLIN 548

Query: 342 GYCKILNVEEAMSL---------------YRQIISNGVRQTVITYNTLLSGLFQAGQAGY 386
           G  K     EA  L               Y  ++    +  + +   LL G    G    
Sbjct: 549 GLSKSARAMEAQQLLFKLYHEDPIPANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNE 608

Query: 387 AQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFH--MLE-------------- 430
           A K++  M   N   D S Y++LI G C+   V +A+  FH  ML+              
Sbjct: 609 ADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALS-FHKQMLQGGFAPNSTSTISLI 667

Query: 431 MNKFEFGI--------------------EIFNCLIDGLCKAGRLDNAWELFHKLPQKGLV 470
              FE G+                    E    LID     G +D   ++ H + + GL+
Sbjct: 668 RGLFENGMVVEADQVIQQLLNYCSLADAEASKALIDLNLNEGNVDAVLDVLHGMAKDGLL 727

Query: 471 PT 472
           P+
Sbjct: 728 PS 729


>gi|168007580|ref|XP_001756486.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162692525|gb|EDQ78882.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 528

 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 144/475 (30%), Positives = 242/475 (50%), Gaps = 19/475 (4%)

Query: 92  DAVISFYRKLVSIG--LLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVR 149
           D + +  +++V+ G  L P+  TL  LI  +G   RG    N+  +A  LF    +F   
Sbjct: 12  DPLETLLKEMVAEGRPLRPN--TLVKLITAYG---RG----NKSGDAFDLFNQAESFACS 62

Query: 150 PDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLV 209
           P V  +  LI+    +G    A  ++KK+V    + G   + + F+Y+++I    + G +
Sbjct: 63  PTVHAFTKLIDILVNSGEFERAELVYKKLV----QKG--CQLDRFAYNVLIRYFGRSGQL 116

Query: 210 DKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVM 269
           D A E+F EMK +G  P       L++    AG  +E    F  ML+ G  PN+ T+N++
Sbjct: 117 DSAMEMFREMKIKGSEPDEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLL 176

Query: 270 IDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGC 329
           +D   K G+++ A GL   M +RG  P   TYN L+D  C  GR+  AR++F  M   GC
Sbjct: 177 MDAFRKVGQLDMALGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGC 236

Query: 330 KHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQK 389
                +Y+ L+NG  K   VEEA  ++R+++  GV   ++ YN+LL+ L +AG      K
Sbjct: 237 SPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWK 296

Query: 390 LFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLC 449
           L  EM      PD  ++N ++D L K N    A ++F  +  +  +  +  +N LID   
Sbjct: 297 LMKEMSRKGFHPDAFSFNTIMDALGKANKPDAAREVFARMVESGCKPDLISYNILIDSYA 356

Query: 450 KAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVV 509
           + G    A ++  ++ + G +P   TY+ +IH L   G++++A   L  ME  GC P+VV
Sbjct: 357 RFGDAAQARQMLEEMVEAGFIPETKTYNSLIHWLATDGQVDEAFAVLEEMETAGCRPDVV 416

Query: 510 TFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHEC 564
           T+N LM    +  +  +   L  +M   ++ + PD  ++++ +D LA D++  E 
Sbjct: 417 TYNRLMDMLGKRGENQRAARLFQQM--KDKGVEPDTLSYAVRIDGLAFDDRLDEA 469



 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 126/414 (30%), Positives = 209/414 (50%), Gaps = 13/414 (3%)

Query: 77  SFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEA 136
           ++N+L     ++   D+ +  +R++   G  PD  T   L+N  G          R++EA
Sbjct: 102 AYNVLIRYFGRSGQLDSAMEMFREMKIKGSEPDEYTYGFLVNALGKA-------GRVQEA 154

Query: 137 TWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSY 196
              F  M+  G+ P++ TY  L++ F + G L +AL L  +M    ++       ++ +Y
Sbjct: 155 RSFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDMALGLFAEMKRRGFQ------PSVVTY 208

Query: 197 SIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLD 256
           +I++D+LC  G V  A++LF +M G G +P     +TL++G   +G  EE + +F EM+D
Sbjct: 209 NILLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVD 268

Query: 257 LGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDT 316
            G   +L+ +N ++  L K G ++    L++ M ++G +PD F++N++MD      + D 
Sbjct: 269 RGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGKANKPDA 328

Query: 317 AREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLS 376
           ARE+F  M   GCK  ++SYNILI+ Y +  +  +A  +  +++  G      TYN+L+ 
Sbjct: 329 AREVFARMVESGCKPDLISYNILIDSYARFGDAAQARQMLEEMVEAGFIPETKTYNSLIH 388

Query: 377 GLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEF 436
            L   GQ   A  + +EM+     PD+ TYN L+D L K    Q A +LF  ++    E 
Sbjct: 389 WLATDGQVDEAFAVLEEMETAGCRPDVVTYNRLMDMLGKRGENQRAARLFQQMKDKGVEP 448

Query: 437 GIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLE 490
               +   IDGL    RLD A  LF  +   G       Y I+I    R G  E
Sbjct: 449 DTLSYAVRIDGLAFDDRLDEALVLFKDMKAVGCPVDKAMYRILIRAAHRAGDTE 502



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 112/423 (26%), Positives = 212/423 (50%), Gaps = 19/423 (4%)

Query: 113 LNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVAL 172
           ++IL+N  G  ER          A  ++K ++  G + D   Y  LI  F R+G L  A+
Sbjct: 72  IDILVNS-GEFER----------AELVYKKLVQKGCQLDRFAYNVLIRYFGRSGQLDSAM 120

Query: 173 RLHKKM-VSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVC 231
            + ++M + G       S+ + ++Y  ++++L K G V +A+  F  M  RG+ P +   
Sbjct: 121 EMFREMKIKG-------SEPDEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTY 173

Query: 232 TTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQ 291
             L+  F   G  +   GLF EM   G +P+++T+N+++D LC  G++  A  L   M  
Sbjct: 174 NLLMDAFRKVGQLDMALGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTG 233

Query: 292 RGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEE 351
            G +PD +TY++L++G    GR++ A ++F  M  +G    +V+YN L+    K  N++ 
Sbjct: 234 DGCSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDR 293

Query: 352 AMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILID 411
              L +++   G      ++NT++  L +A +   A+++F  M     +PDL +YNILID
Sbjct: 294 VWKLMKEMSRKGFHPDAFSFNTIMDALGKANKPDAAREVFARMVESGCKPDLISYNILID 353

Query: 412 GLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVP 471
              +     +A ++   +    F    + +N LI  L   G++D A+ +  ++   G  P
Sbjct: 354 SYARFGDAAQARQMLEEMVEAGFIPETKTYNSLIHWLATDGQVDEAFAVLEEMETAGCRP 413

Query: 472 TVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELL 531
            VVTY+ ++  L ++G+ ++A      M+  G  P+ +++   + G   +++  + + L 
Sbjct: 414 DVVTYNRLMDMLGKRGENQRAARLFQQMKDKGVEPDTLSYAVRIDGLAFDDRLDEALVLF 473

Query: 532 HKM 534
             M
Sbjct: 474 KDM 476



 Score =  181 bits (460), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 97/356 (27%), Positives = 188/356 (52%), Gaps = 2/356 (0%)

Query: 212 AKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMID 271
           A +LF + +    +P V   T LI     +G +E    ++ +++  G + +   +NV+I 
Sbjct: 49  AFDLFNQAESFACSPTVHAFTKLIDILVNSGEFERAELVYKKLVQKGCQLDRFAYNVLIR 108

Query: 272 CLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKH 331
              + G+++ A  +   M  +G  PD +TY  L++     GR+  AR  F +M  +G   
Sbjct: 109 YFGRSGQLDSAMEMFREMKIKGSEPDEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTP 168

Query: 332 TVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLF 391
            + +YN+L++ + K+  ++ A+ L+ ++   G + +V+TYN LL  L  AG+ G A+KLF
Sbjct: 169 NIPTYNLLMDAFRKVGQLDMALGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLF 228

Query: 392 DEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKA 451
            +M      PD  TY+ L++GL K+  V+EA K+F  +        +  +N L+  L KA
Sbjct: 229 HKMTGDGCSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKA 288

Query: 452 GRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTF 511
           G +D  W+L  ++ +KG  P   +++ ++  L +  K + A +    M ++GC P+++++
Sbjct: 289 GNMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGKANKPDAAREVFARMVESGCKPDLISY 348

Query: 512 NTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAV 567
           N L+  + +    ++  ++L +M E     +P+  T++ ++  LA D +  E  AV
Sbjct: 349 NILIDSYARFGDAAQARQMLEEMVEA--GFIPETKTYNSLIHWLATDGQVDEAFAV 402



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 119/409 (29%), Positives = 194/409 (47%), Gaps = 13/409 (3%)

Query: 55  NLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLN 114
            L+ A   F  M      P   ++  L  A+ K        SF+  ++  GL P+  T N
Sbjct: 115 QLDSAMEMFREMKIKGSEPDEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYN 174

Query: 115 ILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRL 174
           +L++ F           ++  A  LF  M   G +P V+TY  L++  C  G +  A +L
Sbjct: 175 LLMDAFRKV-------GQLDMALGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKL 227

Query: 175 HKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTL 234
             KM +GD         + ++YS +++ L K G V++A ++F EM  RG+   +V   +L
Sbjct: 228 FHKM-TGDG-----CSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSL 281

Query: 235 IHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGL 294
           +     AGN + V  L  EM   G  P+  +FN ++D L K  K + A  +   M++ G 
Sbjct: 282 LATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGKANKPDAAREVFARMVESGC 341

Query: 295 NPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMS 354
            PD  +YN L+D Y   G    AR++   M   G      +YN LI+       V+EA +
Sbjct: 342 KPDLISYNILIDSYARFGDAAQARQMLEEMVEAGFIPETKTYNSLIHWLATDGQVDEAFA 401

Query: 355 LYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLC 414
           +  ++ + G R  V+TYN L+  L + G+   A +LF +MK   VEPD  +Y + IDGL 
Sbjct: 402 VLEEMETAGCRPDVVTYNRLMDMLGKRGENQRAARLFQQMKDKGVEPDTLSYAVRIDGLA 461

Query: 415 KNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHK 463
            ++ + EA+ LF  ++         ++  LI    +AG  +   +L H+
Sbjct: 462 FDDRLDEALVLFKDMKAVGCPVDKAMYRILIRAAHRAGDTELEAQLKHE 510



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 103/380 (27%), Positives = 165/380 (43%), Gaps = 36/380 (9%)

Query: 55  NLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLN 114
            + EAR FF  M     +P I ++NLL  A  K    D  +  + ++   G  P  +T N
Sbjct: 150 RVQEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDMALGLFAEMKRRGFQPSVVTYN 209

Query: 115 ILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRL 174
           IL++        LC   R+  A  LF  M   G  PD  TY TL+NG  ++G +  A ++
Sbjct: 210 ILLDA-------LCSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVNGLGKSGRVEEAHKV 262

Query: 175 HKKMVSGDYENGLISKTNI-----------------------------FSYSIIIDSLCK 205
            ++MV       L++  ++                             FS++ I+D+L K
Sbjct: 263 FREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGK 322

Query: 206 EGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLT 265
               D A+E+F  M   G  P ++    LI  +   G+  +   +  EM++ G  P   T
Sbjct: 323 ANKPDAAREVFARMVESGCKPDLISYNILIDSYARFGDAAQARQMLEEMVEAGFIPETKT 382

Query: 266 FNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMH 325
           +N +I  L   G+++EA  +LE M   G  PD  TYN LMD     G    A  +F  M 
Sbjct: 383 YNSLIHWLATDGQVDEAFAVLEEMETAGCRPDVVTYNRLMDMLGKRGENQRAARLFQQMK 442

Query: 326 SKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAG 385
            KG +   +SY + I+G      ++EA+ L++ + + G       Y  L+    +AG   
Sbjct: 443 DKGVEPDTLSYAVRIDGLAFDDRLDEALVLFKDMKAVGCPVDKAMYRILIRAAHRAGDTE 502

Query: 386 YAQKLFDEMKLYNVEPDLST 405
              +L  E +   VE  L++
Sbjct: 503 LEAQLKHESQFMPVESRLTS 522



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 87/325 (26%), Positives = 154/325 (47%), Gaps = 6/325 (1%)

Query: 269 MIDCLCKGGKINEANGLLELMIQRG--LNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHS 326
           M+  L   G ++    LL+ M+  G  L P+  T   L+  Y    +   A ++F    S
Sbjct: 1   MLVVLASWGILDPLETLLKEMVAEGRPLRPN--TLVKLITAYGRGNKSGDAFDLFNQAES 58

Query: 327 KGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGY 386
             C  TV ++  LI+        E A  +Y++++  G +     YN L+    ++GQ   
Sbjct: 59  FACSPTVHAFTKLIDILVNSGEFERAELVYKKLVQKGCQLDRFAYNVLIRYFGRSGQLDS 118

Query: 387 AQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLID 446
           A ++F EMK+   EPD  TY  L++ L K   VQEA   F  +        I  +N L+D
Sbjct: 119 AMEMFREMKIKGSEPDEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMD 178

Query: 447 GLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAP 506
              K G+LD A  LF ++ ++G  P+VVTY+I++  LC  G++  A      M  +GC+P
Sbjct: 179 AFRKVGQLDMALGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSP 238

Query: 507 NVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSA 566
           +  T++TL++G  ++ +  +  ++  +M   +R +  D   ++ ++  LAK         
Sbjct: 239 DSYTYSTLVNGLGKSGRVEEAHKVFREMV--DRGVAVDLVNYNSLLATLAKAGNMDRVWK 296

Query: 567 VSKSSYRACLYVTIFQPSSLGSMIG 591
           + K   R   +   F  +++   +G
Sbjct: 297 LMKEMSRKGFHPDAFSFNTIMDALG 321



 Score = 47.8 bits (112), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 37/142 (26%), Positives = 63/142 (44%), Gaps = 16/142 (11%)

Query: 37  PETQ-LNEFLHENCKSGIINLNEARYFFGYMTHMQPS---PPISSFNLLFGAVAKNRHYD 92
           PET+  N  +H     G   ++EA   F  +  M+ +   P + ++N L   + K     
Sbjct: 378 PETKTYNSLIHWLATDG--QVDEA---FAVLEEMETAGCRPDVVTYNRLMDMLGKRGENQ 432

Query: 93  AVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDV 152
                ++++   G+ PD L+  + I+       GL  ++R+ EA  LFK+M A G   D 
Sbjct: 433 RAARLFQQMKDKGVEPDTLSYAVRID-------GLAFDDRLDEALVLFKDMKAVGCPVDK 485

Query: 153 ITYGTLINGFCRTGNLSVALRL 174
             Y  LI    R G+  +  +L
Sbjct: 486 AMYRILIRAAHRAGDTELEAQL 507


>gi|225428276|ref|XP_002279589.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17140
           [Vitis vinifera]
 gi|297744485|emb|CBI37747.3| unnamed protein product [Vitis vinifera]
          Length = 878

 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 169/583 (28%), Positives = 280/583 (48%), Gaps = 81/583 (13%)

Query: 49  CKSGIINLNEARY-FFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLL 107
            KSG+ +L  +++  F       P PP+  +N++  +  +    D+    Y+ +V  G+ 
Sbjct: 90  AKSGLSDLAFSQFQSFRSQVPANP-PPVYLYNMVLESSLREDKVDSFSWLYKDMVVAGVS 148

Query: 108 PDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGN 167
           P+  TLN+LI        GLC   R ++A  +F  M   G RP+  ++G L+ G+CR G 
Sbjct: 149 PETYTLNLLI-------AGLCDSGRFEDAREVFDKMGVKGCRPNEFSFGILVRGYCRAGL 201

Query: 168 LSVALRLHKKMVS-GDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINP 226
              AL L   M S G   N +I       Y+ +I S C+EG  ++A+ L   M+  G+ P
Sbjct: 202 SMRALELLDGMGSFGVQPNKVI-------YNTLISSFCREGRNEEAERLVERMREDGLFP 254

Query: 227 AVVVCTTLIHGFCCAGNWEEVNGLFIEML---DLG-PRPNLLTFNVMIDCLCKGGKINEA 282
            VV   + I   C AG   E + +F +M    +LG PRPN+ TFN+M++  CK G + EA
Sbjct: 255 DVVTFNSRISALCSAGKILEASRIFRDMQIDEELGLPRPNITTFNLMLEGFCKEGMLEEA 314

Query: 283 NGLLELM-----------------------------------IQRGLNPDRFTYNSLMDG 307
             L+E M                                   + +G+ P+ +++N++MDG
Sbjct: 315 KTLVESMKRNGNLMELESYNIWLLGLVRNGKLLEAQLALKEMVDKGIEPNIYSFNTVMDG 374

Query: 308 YCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQT 367
            C  G I  AR I   M S G     V+Y+ L++G C    V +A ++  +++  G    
Sbjct: 375 LCKNGLISDARMIMGLMISSGIGPDTVTYSTLLHGCCSTGKVLKANNILHEMMRRGCSPN 434

Query: 368 VITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFH 427
             T N LL  L++ G+   A+KL  +M   + + D  T NI+IDGLCK+  + EAV++  
Sbjct: 435 TYTCNILLHSLWKEGRIFEAEKLLQKMNERSYDLDNVTCNIVIDGLCKSGKLDEAVEIVE 494

Query: 428 MLEM----------NKFEFGIE-------------IFNCLIDGLCKAGRLDNAWELFHKL 464
            + +          N F   ++              ++ +I+GLCKAGRLD A + F ++
Sbjct: 495 GMWIHGSAALGNLGNSFIGLVDSSSNGKKCLPDLITYSIIINGLCKAGRLDEARKKFIEM 554

Query: 465 PQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKT 524
             K L P  + Y   IH  C+ GK+  A   L  MEK GC  ++ T+N+L+ G    N+ 
Sbjct: 555 VGKSLHPDSIIYDTFIHSFCKHGKISSAFRVLKDMEKRGCNKSLQTYNSLILGLGSKNQI 614

Query: 525 SKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAV 567
            ++  LL  M   E+ + P+  T++ ++  L +  +  + +++
Sbjct: 615 FEIYGLLDDM--KEKGITPNICTYNNMISCLCEGGRIKDATSL 655



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 158/581 (27%), Positives = 258/581 (44%), Gaps = 69/581 (11%)

Query: 10  LFSSETVSKVKLSSLFKSPRQIAAVSSPETQLNEFLHENCKSGIINLNEARYFFGYMTHM 69
           L SS    KV   S       +A VS     LN  +   C SG     +AR  F  M   
Sbjct: 123 LESSLREDKVDSFSWLYKDMVVAGVSPETYTLNLLIAGLCDSG--RFEDAREVFDKMGVK 180

Query: 70  QPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCV 129
              P   SF +L     +       +     + S G+ P+ +  N LI+ F       C 
Sbjct: 181 GCRPNEFSFGILVRGYCRAGLSMRALELLDGMGSFGVQPNKVIYNTLISSF-------CR 233

Query: 130 ENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLIS 189
           E R +EA  L + M   G+ PDV+T+ + I+  C  G +  A R+ + M   D E GL  
Sbjct: 234 EGRNEEAERLVERMREDGLFPDVVTFNSRISALCSAGKILEASRIFRDM-QIDEELGL-P 291

Query: 190 KTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNG 249
           + NI +++++++  CKEG++++AK L   MK  G    +      + G    G   E   
Sbjct: 292 RPNITTFNLMLEGFCKEGMLEEAKTLVESMKRNGNLMELESYNIWLLGLVRNGKLLEAQL 351

Query: 250 LFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYC 309
              EM+D G  PN+ +FN ++D LCK G I++A  ++ LMI  G+ PD  TY++L+ G C
Sbjct: 352 ALKEMVDKGIEPNIYSFNTVMDGLCKNGLISDARMIMGLMISSGIGPDTVTYSTLLHGCC 411

Query: 310 LVGRIDTAREIFLSMHSKGCK----------HTV-------------------------V 334
             G++  A  I   M  +GC           H++                         V
Sbjct: 412 STGKVLKANNILHEMMRRGCSPNTYTCNILLHSLWKEGRIFEAEKLLQKMNERSYDLDNV 471

Query: 335 SYNILINGYCKILNVEEAMSLYRQII---------------------SNGVR--QTVITY 371
           + NI+I+G CK   ++EA+ +   +                      SNG +    +ITY
Sbjct: 472 TCNIVIDGLCKSGKLDEAVEIVEGMWIHGSAALGNLGNSFIGLVDSSSNGKKCLPDLITY 531

Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
           + +++GL +AG+   A+K F EM   ++ PD   Y+  I   CK+  +  A ++   +E 
Sbjct: 532 SIIINGLCKAGRLDEARKKFIEMVGKSLHPDSIIYDTFIHSFCKHGKISSAFRVLKDMEK 591

Query: 432 NKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEK 491
                 ++ +N LI GL    ++   + L   + +KG+ P + TY+ MI  LC  G+++ 
Sbjct: 592 RGCNKSLQTYNSLILGLGSKNQIFEIYGLLDDMKEKGITPNICTYNNMISCLCEGGRIKD 651

Query: 492 ANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLH 532
           A   L  M + G +PN+ +F  L+  F + +    V E+  
Sbjct: 652 ATSLLDEMLQKGISPNISSFRLLIKAFCKASDFGVVKEVFE 692



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 116/384 (30%), Positives = 192/384 (50%), Gaps = 6/384 (1%)

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
           ++ Y+++++S  +E  VD    L+ +M   G++P       LI G C +G +E+   +F 
Sbjct: 116 VYLYNMVLESSLREDKVDSFSWLYKDMVVAGVSPETYTLNLLIAGLCDSGRFEDAREVFD 175

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
           +M   G RPN  +F +++   C+ G    A  LL+ M   G+ P++  YN+L+  +C  G
Sbjct: 176 KMGVKGCRPNEFSFGILVRGYCRAGLSMRALELLDGMGSFGVQPNKVIYNTLISSFCREG 235

Query: 313 RIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGV----RQTV 368
           R + A  +   M   G    VV++N  I+  C    + EA  ++R +  +      R  +
Sbjct: 236 RNEEAERLVERMREDGLFPDVVTFNSRISALCSAGKILEASRIFRDMQIDEELGLPRPNI 295

Query: 369 ITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHM 428
            T+N +L G  + G    A+ L + MK      +L +YNI + GL +N  + EA      
Sbjct: 296 TTFNLMLEGFCKEGMLEEAKTLVESMKRNGNLMELESYNIWLLGLVRNGKLLEAQLALKE 355

Query: 429 LEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGK 488
           +     E  I  FN ++DGLCK G + +A  +   +   G+ P  VTYS ++HG C  GK
Sbjct: 356 MVDKGIEPNIYSFNTVMDGLCKNGLISDARMIMGLMISSGIGPDTVTYSTLLHGCCSTGK 415

Query: 489 LEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTF 548
           + KAN+ L  M + GC+PN  T N L+H   +  +  +  +LL KM E   +L  D+ T 
Sbjct: 416 VLKANNILHEMMRRGCSPNTYTCNILLHSLWKEGRIFEAEKLLQKMNERSYDL--DNVTC 473

Query: 549 SIVVDLLAKDEKYHECSAVSKSSY 572
           +IV+D L K  K  E   + +  +
Sbjct: 474 NIVIDGLCKSGKLDEAVEIVEGMW 497



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 142/526 (26%), Positives = 245/526 (46%), Gaps = 49/526 (9%)

Query: 39  TQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNL-LFGAVAKNRHYDAVISF 97
           T  N  L   CK G+  L EA+     M        + S+N+ L G V   +  +A ++ 
Sbjct: 296 TTFNLMLEGFCKEGM--LEEAKTLVESMKRNGNLMELESYNIWLLGLVRNGKLLEAQLAL 353

Query: 98  YRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGT 157
            +++V  G+ P+  + N +++       GLC    I +A  +   MI+ G+ PD +TY T
Sbjct: 354 -KEMVDKGIEPNIYSFNTVMD-------GLCKNGLISDARMIMGLMISSGIGPDTVTYST 405

Query: 158 LINGFCRTGNLSVALR-LHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELF 216
           L++G C TG +  A   LH+ M  G          N ++ +I++ SL KEG + +A++L 
Sbjct: 406 LLHGCCSTGKVLKANNILHEMMRRG-------CSPNTYTCNILLHSLWKEGRIFEAEKLL 458

Query: 217 LEMKGRGINPAVVVCTTLIHGFCCAGNWEE----VNGL--------------FIEMLDLG 258
            +M  R  +   V C  +I G C +G  +E    V G+              FI ++D  
Sbjct: 459 QKMNERSYDLDNVTCNIVIDGLCKSGKLDEAVEIVEGMWIHGSAALGNLGNSFIGLVDSS 518

Query: 259 PR-----PNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGR 313
                  P+L+T++++I+ LCK G+++EA      M+ + L+PD   Y++ +  +C  G+
Sbjct: 519 SNGKKCLPDLITYSIIINGLCKAGRLDEARKKFIEMVGKSLHPDSIIYDTFIHSFCKHGK 578

Query: 314 IDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNT 373
           I +A  +   M  +GC  ++ +YN LI G      + E   L   +   G+   + TYN 
Sbjct: 579 ISSAFRVLKDMEKRGCNKSLQTYNSLILGLGSKNQIFEIYGLLDDMKEKGITPNICTYNN 638

Query: 374 LLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNN---CVQEAVKLFHMLE 430
           ++S L + G+   A  L DEM    + P++S++ +LI   CK +    V+E  ++   + 
Sbjct: 639 MISCLCEGGRIKDATSLLDEMLQKGISPNISSFRLLIKAFCKASDFGVVKEVFEIALSIC 698

Query: 431 MNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLE 490
            +K      +FN L+ G    G +  A ELF     +        Y+ +I  LC+   LE
Sbjct: 699 GHKEALYSLMFNELLIG----GEVSEAKELFDAALDRCFDLGNFQYNDLIEKLCKDEMLE 754

Query: 491 KANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAE 536
            A+D L  M   G   +  +F  ++ G  +  K     EL  +M +
Sbjct: 755 NASDILHKMIDKGYRFDPASFMPVIDGLGKRGKKHDADELAERMMD 800



 Score =  158 bits (399), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 130/500 (26%), Positives = 225/500 (45%), Gaps = 36/500 (7%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CK+G+I+  +AR   G M      P   +++ L              +   +++  G  P
Sbjct: 376 CKNGLIS--DARMIMGLMISSGIGPDTVTYSTLLHGCCSTGKVLKANNILHEMMRRGCSP 433

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           +  T NIL++        L  E RI EA  L + M       D +T   +I+G C++G L
Sbjct: 434 NTYTCNILLH-------SLWKEGRIFEAEKLLQKMNERSYDLDNVTCNIVIDGLCKSGKL 486

Query: 169 SVALRL------HKKMVSGDYEN---GLISKT--------NIFSYSIIIDSLCKEGLVDK 211
             A+ +      H     G+  N   GL+  +        ++ +YSIII+ LCK G +D+
Sbjct: 487 DEAVEIVEGMWIHGSAALGNLGNSFIGLVDSSSNGKKCLPDLITYSIIINGLCKAGRLDE 546

Query: 212 AKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMID 271
           A++ F+EM G+ ++P  ++  T IH FC  G       +  +M   G   +L T+N +I 
Sbjct: 547 ARKKFIEMVGKSLHPDSIIYDTFIHSFCKHGKISSAFRVLKDMEKRGCNKSLQTYNSLIL 606

Query: 272 CLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKH 331
            L    +I E  GLL+ M ++G+ P+  TYN+++   C  GRI  A  +   M  KG   
Sbjct: 607 GLGSKNQIFEIYGLLDDMKEKGITPNICTYNNMISCLCEGGRIKDATSLLDEMLQKGISP 666

Query: 332 TVVSYNILINGYCKILN---VEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQ 388
            + S+ +LI  +CK  +   V+E   +   I  +      + +N LL G    G+   A+
Sbjct: 667 NISSFRLLIKAFCKASDFGVVKEVFEIALSICGHKEALYSLMFNELLIG----GEVSEAK 722

Query: 389 KLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGL 448
           +LFD       +     YN LI+ LCK+  ++ A  + H +    + F    F  +IDGL
Sbjct: 723 ELFDAALDRCFDLGNFQYNDLIEKLCKDEMLENASDILHKMIDKGYRFDPASFMPVIDGL 782

Query: 449 CKAGRLDNAWELFHK---LPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCA 505
            K G+  +A EL  +   +  +G+V   +T +       ++ K   ++   +    +G  
Sbjct: 783 GKRGKKHDADELAERMMDMASEGMVENKITRNESAFNRQKRNKFSGSDWQTIIHRDDGSG 842

Query: 506 PNVVTFNTLMHGFLQNNKTS 525
             +     +  G+ Q + +S
Sbjct: 843 LALKALKRVQKGWGQGSISS 862


>gi|357125910|ref|XP_003564632.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like isoform 1 [Brachypodium distachyon]
 gi|357125912|ref|XP_003564633.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like isoform 2 [Brachypodium distachyon]
          Length = 704

 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 149/506 (29%), Positives = 263/506 (51%), Gaps = 21/506 (4%)

Query: 56  LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLV-SIGLLPDFLTLN 114
           L+ A Y    M   +  P    +N L G   +N  ++  +  + +LV   G  P+  T N
Sbjct: 210 LDNALYLLDEMPSYEVQPDAVCYNALLGGCFRNGEFEKAMRVWEQLVRDPGASPNLATYN 269

Query: 115 ILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRL 174
           ++++       GLC     KEA  +++ M+A   +PD+ITYGT+I+G CR+ ++  A R+
Sbjct: 270 VMLD-------GLCKLGMFKEAGDVWERMVANNHQPDMITYGTMIHGLCRSTDVDSAARV 322

Query: 175 HKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTL 234
           + +M+    + GL+   ++  Y+ ++   C  G V +A + +  M   GI   V     +
Sbjct: 323 YSEMI----KTGLVP--DVVIYNSLLKGFCHAGRVGEAWKFWDSMSVSGIR-NVTSYNIM 375

Query: 235 IHGFCCAGNWEEVNGLFIEML--DLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQR 292
           + G    G  ++   L+ E+L  D    P+++TF+ MI  LC+ G  N++  +LE     
Sbjct: 376 LKGLFDGGMVDKATDLW-ELLEKDDSLSPDMVTFSTMIHGLCEKGFANKSLQILEEARTS 434

Query: 293 GLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEA 352
           G   D F+Y+S++ G C  GR+D A +++  +     K     YN LING+C+     +A
Sbjct: 435 GKELDEFSYSSMISGLCKDGRLDDAVKLYEKISMDSFKPNSHIYNALINGFCQASKFSDA 494

Query: 353 MSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDG 412
           + +Y Q+  N    T ITYNTL+ GL +A +   A +   EM       D++TY  LI G
Sbjct: 495 IRVYSQMAENDCSPTTITYNTLIHGLCKAEKYLEASRFTREMLEKGCMLDVNTYGSLIRG 554

Query: 413 LCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQK-GLVP 471
           LC++  +  A+ L++ +     +  + + N LI GLC AG++D A +L  ++ +K    P
Sbjct: 555 LCRDKKIDGALALWNQILDKGLQTDVVMHNILIHGLCSAGKVDEASQLLSEMKEKNNCCP 614

Query: 472 TVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELL 531
            VVTY+ ++ G    G  +KA    + + +NG  P+++++NT + G    N+T + V+LL
Sbjct: 615 NVVTYNTLMDGFYETGCFDKAASLWMAILENGLVPDIISYNTRIKGLCSCNRTPEGVQLL 674

Query: 532 HKMAEPERNLVPDDTTFSIVVDLLAK 557
           ++M      ++P   T++I+V  + K
Sbjct: 675 NEML--ASGIIPTAITWNILVRAVIK 698



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 163/552 (29%), Positives = 260/552 (47%), Gaps = 81/552 (14%)

Query: 72  SPPISSFNLLFGAVAKNRHYDAVISFYRKLV--SIG--LLPDFLTLNILINCFGNKERGL 127
           +P + S N L  A  + R +    +F+  L   + G  + P+  T NI++       R L
Sbjct: 117 NPGVRSHNALLDAFVRARRFSDADAFFASLSHGAFGRRIAPNLQTYNIML-------RSL 169

Query: 128 CVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVS------- 180
           CV   +  A  LF ++   G+ PD ITY TL++GF +   L  AL L  +M S       
Sbjct: 170 CVRGDLDRAVTLFDSLRCRGLAPDRITYSTLMSGFVKNNRLDNALYLLDEMPSYEVQPDA 229

Query: 181 --------GDYENGLISKT---------------NIFSYSIIIDSLCKEGL--------- 208
                   G + NG   K                N+ +Y++++D LCK G+         
Sbjct: 230 VCYNALLGGCFRNGEFEKAMRVWEQLVRDPGASPNLATYNVMLDGLCKLGMFKEAGDVWE 289

Query: 209 --------------------------VDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAG 242
                                     VD A  ++ EM   G+ P VV+  +L+ GFC AG
Sbjct: 290 RMVANNHQPDMITYGTMIHGLCRSTDVDSAARVYSEMIKTGLVPDVVIYNSLLKGFCHAG 349

Query: 243 NWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQ-RGLNPDRFTY 301
              E    +  M   G R N+ ++N+M+  L  GG +++A  L EL+ +   L+PD  T+
Sbjct: 350 RVGEAWKFWDSMSVSGIR-NVTSYNIMLKGLFDGGMVDKATDLWELLEKDDSLSPDMVTF 408

Query: 302 NSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIIS 361
           ++++ G C  G  + + +I     + G +    SY+ +I+G CK   +++A+ LY +I  
Sbjct: 409 STMIHGLCEKGFANKSLQILEEARTSGKELDEFSYSSMISGLCKDGRLDDAVKLYEKISM 468

Query: 362 NGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQE 421
           +  +     YN L++G  QA +   A +++ +M   +  P   TYN LI GLCK     E
Sbjct: 469 DSFKPNSHIYNALINGFCQASKFSDAIRVYSQMAENDCSPTTITYNTLIHGLCKAEKYLE 528

Query: 422 AVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIH 481
           A +    +        +  +  LI GLC+  ++D A  L++++  KGL   VV ++I+IH
Sbjct: 529 ASRFTREMLEKGCMLDVNTYGSLIRGLCRDKKIDGALALWNQILDKGLQTDVVMHNILIH 588

Query: 482 GLCRKGKLEKANDFLLYM-EKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERN 540
           GLC  GK+++A+  L  M EKN C PNVVT+NTLM GF +     K   L   MA  E  
Sbjct: 589 GLCSAGKVDEASQLLSEMKEKNNCCPNVVTYNTLMDGFYETGCFDKAASLW--MAILENG 646

Query: 541 LVPDDTTFSIVV 552
           LVPD  +++  +
Sbjct: 647 LVPDIISYNTRI 658



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 129/459 (28%), Positives = 219/459 (47%), Gaps = 43/459 (9%)

Query: 140 FKNMIAF-GVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSI 198
           F+ + +F G  P V ++  L++ F R    S A      +  G +  G     N+ +Y+I
Sbjct: 107 FRRLPSFLGCNPGVRSHNALLDAFVRARRFSDADAFFASLSHGAF--GRRIAPNLQTYNI 164

Query: 199 IIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGF-------------------- 238
           ++ SLC  G +D+A  LF  ++ RG+ P  +  +TL+ GF                    
Sbjct: 165 MLRSLCVRGDLDRAVTLFDSLRCRGLAPDRITYSTLMSGFVKNNRLDNALYLLDEMPSYE 224

Query: 239 -----CC----------AGNWEEVNGLFIEML-DLGPRPNLLTFNVMIDCLCKGGKINEA 282
                 C           G +E+   ++ +++ D G  PNL T+NVM+D LCK G   EA
Sbjct: 225 VQPDAVCYNALLGGCFRNGEFEKAMRVWEQLVRDPGASPNLATYNVMLDGLCKLGMFKEA 284

Query: 283 NGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILING 342
             + E M+     PD  TY +++ G C    +D+A  ++  M   G    VV YN L+ G
Sbjct: 285 GDVWERMVANNHQPDMITYGTMIHGLCRSTDVDSAARVYSEMIKTGLVPDVVIYNSLLKG 344

Query: 343 YCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEM-KLYNVEP 401
           +C    V EA   +  +  +G+R  V +YN +L GLF  G    A  L++ + K  ++ P
Sbjct: 345 FCHAGRVGEAWKFWDSMSVSGIRN-VTSYNIMLKGLFDGGMVDKATDLWELLEKDDSLSP 403

Query: 402 DLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELF 461
           D+ T++ +I GLC+     +++++      +  E     ++ +I GLCK GRLD+A +L+
Sbjct: 404 DMVTFSTMIHGLCEKGFANKSLQILEEARTSGKELDEFSYSSMISGLCKDGRLDDAVKLY 463

Query: 462 HKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQN 521
            K+      P    Y+ +I+G C+  K   A      M +N C+P  +T+NTL+HG  + 
Sbjct: 464 EKISMDSFKPNSHIYNALINGFCQASKFSDAIRVYSQMAENDCSPTTITYNTLIHGLCKA 523

Query: 522 NKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEK 560
            K  +      +M   E+  + D  T+  ++  L +D+K
Sbjct: 524 EKYLEASRFTREML--EKGCMLDVNTYGSLIRGLCRDKK 560



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 108/373 (28%), Positives = 191/373 (51%), Gaps = 10/373 (2%)

Query: 198 IIIDSLCKEGLVDKAKELFLEMKG-RGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLD 256
           +++ +  +  + D A   F  +    G NP V     L+  F  A  + + +  F  +  
Sbjct: 89  VVLSAFSRALMPDAALAAFRRLPSFLGCNPGVRSHNALLDAFVRARRFSDADAFFASLSH 148

Query: 257 --LGPR--PNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
              G R  PNL T+N+M+  LC  G ++ A  L + +  RGL PDR TY++LM G+    
Sbjct: 149 GAFGRRIAPNLQTYNIMLRSLCVRGDLDRAVTLFDSLRCRGLAPDRITYSTLMSGFVKNN 208

Query: 313 RIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISN-GVRQTVITY 371
           R+D A  +   M S   +   V YN L+ G  +    E+AM ++ Q++ + G    + TY
Sbjct: 209 RLDNALYLLDEMPSYEVQPDAVCYNALLGGCFRNGEFEKAMRVWEQLVRDPGASPNLATY 268

Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
           N +L GL + G    A  +++ M   N +PD+ TY  +I GLC++  V  A +++  +  
Sbjct: 269 NVMLDGLCKLGMFKEAGDVWERMVANNHQPDMITYGTMIHGLCRSTDVDSAARVYSEMIK 328

Query: 432 NKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEK 491
                 + I+N L+ G C AGR+  AW+ +  +   G +  V +Y+IM+ GL   G ++K
Sbjct: 329 TGLVPDVVIYNSLLKGFCHAGRVGEAWKFWDSMSVSG-IRNVTSYNIMLKGLFDGGMVDK 387

Query: 492 ANDFLLYMEK-NGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSI 550
           A D    +EK +  +P++VTF+T++HG  +    +K +++L +     + L  D+ ++S 
Sbjct: 388 ATDLWELLEKDDSLSPDMVTFSTMIHGLCEKGFANKSLQILEEARTSGKEL--DEFSYSS 445

Query: 551 VVDLLAKDEKYHE 563
           ++  L KD +  +
Sbjct: 446 MISGLCKDGRLDD 458



 Score =  129 bits (323), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 99/371 (26%), Positives = 170/371 (45%), Gaps = 39/371 (10%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
           N  L   C +G   + EA  F+  M+ +     ++S+N++   +      D     +  L
Sbjct: 339 NSLLKGFCHAG--RVGEAWKFWDSMS-VSGIRNVTSYNIMLKGLFDGGMVDKATDLWELL 395

Query: 102 -VSIGLLPDFLTLNILIN--C---FGNKE-----------------------RGLCVENR 132
                L PD +T + +I+  C   F NK                         GLC + R
Sbjct: 396 EKDDSLSPDMVTFSTMIHGLCEKGFANKSLQILEEARTSGKELDEFSYSSMISGLCKDGR 455

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
           + +A  L++ +     +P+   Y  LINGFC+    S A+R++ +M   D      S T 
Sbjct: 456 LDDAVKLYEKISMDSFKPNSHIYNALINGFCQASKFSDAIRVYSQMAEND-----CSPTT 510

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
           I +Y+ +I  LCK     +A     EM  +G    V    +LI G C     +    L+ 
Sbjct: 511 I-TYNTLIHGLCKAEKYLEASRFTREMLEKGCMLDVNTYGSLIRGLCRDKKIDGALALWN 569

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRG-LNPDRFTYNSLMDGYCLV 311
           ++LD G + +++  N++I  LC  GK++EA+ LL  M ++    P+  TYN+LMDG+   
Sbjct: 570 QILDKGLQTDVVMHNILIHGLCSAGKVDEASQLLSEMKEKNNCCPNVVTYNTLMDGFYET 629

Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
           G  D A  +++++   G    ++SYN  I G C      E + L  +++++G+  T IT+
Sbjct: 630 GCFDKAASLWMAILENGLVPDIISYNTRIKGLCSCNRTPEGVQLLNEMLASGIIPTAITW 689

Query: 372 NTLLSGLFQAG 382
           N L+  + + G
Sbjct: 690 NILVRAVIKYG 700



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 33/130 (25%), Positives = 56/130 (43%), Gaps = 10/130 (7%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPS-PPISSFNLLFGAVAKNRHYDAVISFYRK 100
           N  +H  C +G   ++EA      M       P + ++N L     +   +D   S +  
Sbjct: 584 NILIHGLCSAG--KVDEASQLLSEMKEKNNCCPNVVTYNTLMDGFYETGCFDKAASLWMA 641

Query: 101 LVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLIN 160
           ++  GL+PD ++ N  I       +GLC  NR  E   L   M+A G+ P  IT+  L+ 
Sbjct: 642 ILENGLVPDIISYNTRI-------KGLCSCNRTPEGVQLLNEMLASGIIPTAITWNILVR 694

Query: 161 GFCRTGNLSV 170
              + G + +
Sbjct: 695 AVIKYGPIQI 704


>gi|297746120|emb|CBI16176.3| unnamed protein product [Vitis vinifera]
          Length = 819

 Score =  232 bits (592), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 152/458 (33%), Positives = 231/458 (50%), Gaps = 30/458 (6%)

Query: 72  SPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVEN 131
           +P +  +N L  ++ K+   D   S +  +   GL P+ +T +ILI+ F       C   
Sbjct: 352 APSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSF-------CKRG 404

Query: 132 RIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKT 191
           ++  A      M   G++  V  Y +LI+G C+ G L  A  L  +M++    NGL  K 
Sbjct: 405 KLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIA----NGL--KP 458

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
           N+  Y+ +I   CKEG +  A  L+ EM G+GI+P     T LI G C A    E N LF
Sbjct: 459 NVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLF 518

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
            EM++    PN +T+NV+I+  CK G    A  LL+ M+++GL PD +TY  L+ G C  
Sbjct: 519 GEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCST 578

Query: 312 GRIDTAREIFLSMHSK--------GCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNG 363
           GR+  ARE    +  +        GC   VV+Y  LING CKI  +++A  L R+++++ 
Sbjct: 579 GRVSEAREFMNDLQGEQQKLNEIEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASN 638

Query: 364 VRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAV 423
                 TY   L  L   G    A +L D + L     +  TYNILI G CK   +QEA 
Sbjct: 639 SLPNQNTYACFLDYLTSEGNIEKAIQLHDVL-LEGFLANTVTYNILIRGFCKLGRIQEAA 697

Query: 424 KLFHMLEMNKFEFGIE----IFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIM 479
           ++     +N  + GI      ++ +I   C+ G L  A +L+  +  +G+ P  V Y+ +
Sbjct: 698 EVL----VNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFL 753

Query: 480 IHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHG 517
           I+G C  G+L KA +    M + G  PN  T+N+L+HG
Sbjct: 754 IYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLIHG 791



 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 150/488 (30%), Positives = 230/488 (47%), Gaps = 24/488 (4%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
           P  ++ + L   + K  +  +      K+   G+ P     N LIN        +C + +
Sbjct: 318 PSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALIN-------SMCKDGK 370

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
           + EA  LF NM   G+ P+ +TY  LI+ FC+ G L VAL    KM     E G+  K  
Sbjct: 371 LDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMT----EVGI--KAT 424

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
           ++ YS +I   CK G +  AK LF EM   G+ P VV+ T+LI G+C  G       L+ 
Sbjct: 425 VYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYH 484

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
           EM   G  PN  TF  +I  LC   ++ EAN L   M++  + P+  TYN L++G+C  G
Sbjct: 485 EMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEG 544

Query: 313 RIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISN--------GV 364
               A E+   M  KG      +Y  LI+G C    V EA      +           G 
Sbjct: 545 NTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEIEGC 604

Query: 365 RQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVK 424
              V+TY  L++GL + G    A+ L  EM   N  P+ +TY   +D L     +++A++
Sbjct: 605 LPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQ 664

Query: 425 LFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLC 484
           L H + +  F      +N LI G CK GR+  A E+   +   G+ P  ++YS +I+  C
Sbjct: 665 L-HDVLLEGFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYC 723

Query: 485 RKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPD 544
           R+G L++A      M   G  P+ V +N L++G     + +K  EL   M    R + P+
Sbjct: 724 RRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMM--RRGVKPN 781

Query: 545 DTTFSIVV 552
             T++ ++
Sbjct: 782 RATYNSLI 789



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 133/486 (27%), Positives = 241/486 (49%), Gaps = 19/486 (3%)

Query: 78  FNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEAT 137
           F+LL     +NR     +   R ++  G+LP   TL+ ++N       GL    + + A 
Sbjct: 148 FDLLIQTYVQNRRELDGLVVVRLMMDCGILPQIRTLSGVLN-------GLIRIRQFRMAL 200

Query: 138 WLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYS 197
            LF  +++ G+RPDV  Y  ++   C   +   A  +  +M S   +       ++ +Y+
Sbjct: 201 HLFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCD------LSVATYN 254

Query: 198 IIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDL 257
           + I  LCK   V +A E+   +  +G+   V    TL+ G C    +E    +  EM++ 
Sbjct: 255 VFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEF 314

Query: 258 GPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTA 317
           G  P+    + ++D L K G I  A  L+  + + G+ P  F YN+L++  C  G++D A
Sbjct: 315 GFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEA 374

Query: 318 REIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSG 377
             +F +M  KG     V+Y+ILI+ +CK   ++ A+    ++   G++ TV  Y++L+SG
Sbjct: 375 ESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISG 434

Query: 378 LFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFG 437
             + G+   A+ LFDEM    ++P++  Y  LI G CK   +  A +L+H +        
Sbjct: 435 HCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPN 494

Query: 438 IEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLL 497
              F  LI GLC A R+  A +LF ++ +  ++P  VTY+++I G C++G   +A + L 
Sbjct: 495 TYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLD 554

Query: 498 YMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNL------VPDDTTFSIV 551
            M + G  P+  T+  L+ G     + S+  E ++ +   ++ L      +P+  T++ +
Sbjct: 555 EMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEIEGCLPNVVTYTAL 614

Query: 552 VDLLAK 557
           ++ L K
Sbjct: 615 INGLCK 620



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 124/404 (30%), Positives = 190/404 (47%), Gaps = 27/404 (6%)

Query: 31  IAAVSSPETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRH 90
           I A   P + L   +  +CK G   L  A+  F  M      P +  +  L     K   
Sbjct: 421 IKATVYPYSSL---ISGHCKLG--KLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGE 475

Query: 91  YDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRP 150
                  Y ++   G+ P+  T   LI+       GLC  NR+ EA  LF  M+ + V P
Sbjct: 476 LHNAFRLYHEMTGKGISPNTYTFTALIS-------GLCHANRMAEANKLFGEMVEWNVIP 528

Query: 151 DVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVD 210
           + +TY  LI G C+ GN   A  L  +MV    E GL+  T  ++Y  +I  LC  G V 
Sbjct: 529 NEVTYNVLIEGHCKEGNTVRAFELLDEMV----EKGLVPDT--YTYRPLISGLCSTGRVS 582

Query: 211 KAKELFLEMKGR--------GINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPN 262
           +A+E   +++G         G  P VV  T LI+G C  G  ++   L  EML     PN
Sbjct: 583 EAREFMNDLQGEQQKLNEIEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPN 642

Query: 263 LLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFL 322
             T+   +D L   G I +A  L +++++ G   +  TYN L+ G+C +GRI  A E+ +
Sbjct: 643 QNTYACFLDYLTSEGNIEKAIQLHDVLLE-GFLANTVTYNILIRGFCKLGRIQEAAEVLV 701

Query: 323 SMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAG 382
           +M   G     +SY+ +I  YC+  +++EA+ L+  +++ GV    + YN L+ G    G
Sbjct: 702 NMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTG 761

Query: 383 QAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLF 426
           +   A +L D+M    V+P+ +TYN LI G C  + V      F
Sbjct: 762 ELTKAFELRDDMMRRGVKPNRATYNSLIHGTCLMSSVSSTADYF 805



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 65/243 (26%), Positives = 125/243 (51%), Gaps = 6/243 (2%)

Query: 339 LINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYN 398
           ++NG  +I     A+ L+ +I+S+G+R  V  Y  ++  L +      A+++   M+   
Sbjct: 186 VLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSG 245

Query: 399 VEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAW 458
            +  ++TYN+ I GLCKN  V EAV++ ++L        +  +  L+ GLCK    +   
Sbjct: 246 CDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGE 305

Query: 459 ELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGF 518
           E+ +++ + G VP+    S ++ GL +KG +  A D +  ++K G AP++  +N L++  
Sbjct: 306 EMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSM 365

Query: 519 LQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAK----DEKYHECSAVSKSSYRA 574
            ++ K  +   L + M    + L P+D T+SI++D   K    D   H    +++   +A
Sbjct: 366 CKDGKLDEAESLFNNMGH--KGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKA 423

Query: 575 CLY 577
            +Y
Sbjct: 424 TVY 426



 Score =  105 bits (262), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 79/295 (26%), Positives = 146/295 (49%), Gaps = 11/295 (3%)

Query: 249 GLFIEMLDLGPRPNLLT---FNVMIDCLCKGGKINEANGLL--ELMIQRGLNPDRFTYNS 303
           GLF   LD   + N  T   F+++I    +  +  E +GL+   LM+  G+ P   T + 
Sbjct: 128 GLFESFLDSYRKCNFSTTLGFDLLIQTYVQNRR--ELDGLVVVRLMMDCGILPQIRTLSG 185

Query: 304 LMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNG 363
           +++G   + +   A  +F  + S G +  V  Y  ++   C++ +   A  +  ++ S+G
Sbjct: 186 VLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSG 245

Query: 364 VRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAV 423
              +V TYN  + GL +  +   A ++ + +    +  D+ TY  L+ GLCK    +   
Sbjct: 246 CDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGE 305

Query: 424 KLFHMLEMNKFEF--GIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIH 481
           ++  M EM +F F       + L+DGL K G + +A++L +K+ + G+ P++  Y+ +I+
Sbjct: 306 EM--MNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALIN 363

Query: 482 GLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAE 536
            +C+ GKL++A      M   G  PN VT++ L+  F +  K    +  L KM E
Sbjct: 364 SMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTE 418


>gi|449468059|ref|XP_004151739.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 225

 Score =  232 bits (591), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 110/212 (51%), Positives = 152/212 (71%), Gaps = 2/212 (0%)

Query: 353 MSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDG 412
           M+LY +++  G R    TY TLL+GLFQ G+ G A+KLF  +K Y +  D   Y I +DG
Sbjct: 1   MNLYNEMLQVGKRPNATTYGTLLTGLFQTGKVGDAKKLFRVLKTYGISADSCIYRIFLDG 60

Query: 413 LCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPT 472
           LCKN C+ EA++ F+ L+    +  IE +NCLIDGLCKAG+L+ AWELF KL Q+GL   
Sbjct: 61  LCKNGCLYEAMEHFNQLKSYNIKLDIESYNCLIDGLCKAGKLETAWELFEKLYQEGLQSD 120

Query: 473 VVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLH 532
           VVTY+IMIHG C+ G+++KAN     ME+NGC P+++T+NTL+ GF Q+NK+ +VV+LLH
Sbjct: 121 VVTYNIMIHGFCKVGQVDKANILFEKMEENGCTPDIITYNTLLCGFCQSNKSDEVVKLLH 180

Query: 533 KMAEPERNLVPDDTTFSIVVDLLAKDEKYHEC 564
           KM   +R++ PD  + +IV+D+L KDEKY EC
Sbjct: 181 KMI--QRDMSPDAISCNIVIDMLRKDEKYQEC 210



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 63/180 (35%), Positives = 98/180 (54%)

Query: 250 LFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYC 309
           L+ EML +G RPN  T+  ++  L + GK+ +A  L  ++   G++ D   Y   +DG C
Sbjct: 3   LYNEMLQVGKRPNATTYGTLLTGLFQTGKVGDAKKLFRVLKTYGISADSCIYRIFLDGLC 62

Query: 310 LVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVI 369
             G +  A E F  + S   K  + SYN LI+G CK   +E A  L+ ++   G++  V+
Sbjct: 63  KNGCLYEAMEHFNQLKSYNIKLDIESYNCLIDGLCKAGKLETAWELFEKLYQEGLQSDVV 122

Query: 370 TYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHML 429
           TYN ++ G  + GQ   A  LF++M+     PD+ TYN L+ G C++N   E VKL H +
Sbjct: 123 TYNIMIHGFCKVGQVDKANILFEKMEENGCTPDIITYNTLLCGFCQSNKSDEVVKLLHKM 182



 Score =  115 bits (287), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 69/212 (32%), Positives = 111/212 (52%)

Query: 215 LFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLC 274
           L+ EM   G  P      TL+ G    G   +   LF  +   G   +   + + +D LC
Sbjct: 3   LYNEMLQVGKRPNATTYGTLLTGLFQTGKVGDAKKLFRVLKTYGISADSCIYRIFLDGLC 62

Query: 275 KGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVV 334
           K G + EA      +    +  D  +YN L+DG C  G+++TA E+F  ++ +G +  VV
Sbjct: 63  KNGCLYEAMEHFNQLKSYNIKLDIESYNCLIDGLCKAGKLETAWELFEKLYQEGLQSDVV 122

Query: 335 SYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEM 394
           +YNI+I+G+CK+  V++A  L+ ++  NG    +ITYNTLL G  Q+ ++    KL  +M
Sbjct: 123 TYNIMIHGFCKVGQVDKANILFEKMEENGCTPDIITYNTLLCGFCQSNKSDEVVKLLHKM 182

Query: 395 KLYNVEPDLSTYNILIDGLCKNNCVQEAVKLF 426
              ++ PD  + NI+ID L K+   QE + L 
Sbjct: 183 IQRDMSPDAISCNIVIDMLRKDEKYQECLDLL 214



 Score =  112 bits (279), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 64/208 (30%), Positives = 113/208 (54%)

Query: 289 MIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILN 348
           M+Q G  P+  TY +L+ G    G++  A+++F  + + G       Y I ++G CK   
Sbjct: 7   MLQVGKRPNATTYGTLLTGLFQTGKVGDAKKLFRVLKTYGISADSCIYRIFLDGLCKNGC 66

Query: 349 VEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNI 408
           + EAM  + Q+ S  ++  + +YN L+ GL +AG+   A +LF+++    ++ D+ TYNI
Sbjct: 67  LYEAMEHFNQLKSYNIKLDIESYNCLIDGLCKAGKLETAWELFEKLYQEGLQSDVVTYNI 126

Query: 409 LIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKG 468
           +I G CK   V +A  LF  +E N     I  +N L+ G C++ + D   +L HK+ Q+ 
Sbjct: 127 MIHGFCKVGQVDKANILFEKMEENGCTPDIITYNTLLCGFCQSNKSDEVVKLLHKMIQRD 186

Query: 469 LVPTVVTYSIMIHGLCRKGKLEKANDFL 496
           + P  ++ +I+I  L +  K ++  D L
Sbjct: 187 MSPDAISCNIVIDMLRKDEKYQECLDLL 214



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 70/228 (30%), Positives = 117/228 (51%), Gaps = 6/228 (2%)

Query: 139 LFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSI 198
           L+  M+  G RP+  TYGTL+ G  +TG +  A +L + + +     G+ + + I  Y I
Sbjct: 3   LYNEMLQVGKRPNATTYGTLLTGLFQTGKVGDAKKLFRVLKT----YGISADSCI--YRI 56

Query: 199 IIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLG 258
            +D LCK G + +A E F ++K   I   +     LI G C AG  E    LF ++   G
Sbjct: 57  FLDGLCKNGCLYEAMEHFNQLKSYNIKLDIESYNCLIDGLCKAGKLETAWELFEKLYQEG 116

Query: 259 PRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAR 318
            + +++T+N+MI   CK G++++AN L E M + G  PD  TYN+L+ G+C   + D   
Sbjct: 117 LQSDVVTYNIMIHGFCKVGQVDKANILFEKMEENGCTPDIITYNTLLCGFCQSNKSDEVV 176

Query: 319 EIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQ 366
           ++   M  +      +S NI+I+   K    +E + L  + +    R+
Sbjct: 177 KLLHKMIQRDMSPDAISCNIVIDMLRKDEKYQECLDLLPRFLVQERRR 224



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 62/225 (27%), Positives = 108/225 (48%), Gaps = 13/225 (5%)

Query: 62  FFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFG 121
            +  M  +   P  +++  L   + +          +R L + G+  D     I ++   
Sbjct: 3   LYNEMLQVGKRPNATTYGTLLTGLFQTGKVGDAKKLFRVLKTYGISADSCIYRIFLD--- 59

Query: 122 NKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSG 181
               GLC    + EA   F  + ++ ++ D+ +Y  LI+G C+ G L  A  L +K+   
Sbjct: 60  ----GLCKNGCLYEAMEHFNQLKSYNIKLDIESYNCLIDGLCKAGKLETAWELFEKL--- 112

Query: 182 DYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCA 241
            Y+ GL  ++++ +Y+I+I   CK G VDKA  LF +M+  G  P ++   TL+ GFC +
Sbjct: 113 -YQEGL--QSDVVTYNIMIHGFCKVGQVDKANILFEKMEENGCTPDIITYNTLLCGFCQS 169

Query: 242 GNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLL 286
              +EV  L  +M+     P+ ++ N++ID L K  K  E   LL
Sbjct: 170 NKSDEVVKLLHKMIQRDMSPDAISCNIVIDMLRKDEKYQECLDLL 214



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 58/197 (29%), Positives = 86/197 (43%), Gaps = 18/197 (9%)

Query: 10  LFSSETVSKVKLSSLFKSPRQIAAVSSPETQLNEFLHENCKSGIINLNEARYFFGYMTHM 69
           LF +  V   K   LF+  +    +S+       FL   CK+G   L EA   F  +   
Sbjct: 26  LFQTGKVGDAK--KLFRVLK-TYGISADSCIYRIFLDGLCKNGC--LYEAMEHFNQLKSY 80

Query: 70  QPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCV 129
                I S+N L   + K    +     + KL   GL  D +T NI+I+       G C 
Sbjct: 81  NIKLDIESYNCLIDGLCKAGKLETAWELFEKLYQEGLQSDVVTYNIMIH-------GFCK 133

Query: 130 ENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLIS 189
             ++ +A  LF+ M   G  PD+ITY TL+ GFC++      ++L  KM+  D     I 
Sbjct: 134 VGQVDKANILFEKMEENGCTPDIITYNTLLCGFCQSNKSDEVVKLLHKMIQRDMSPDAI- 192

Query: 190 KTNIFSYSIIIDSLCKE 206
                S +I+ID L K+
Sbjct: 193 -----SCNIVIDMLRKD 204


>gi|359474464|ref|XP_003631475.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Vitis vinifera]
 gi|297742067|emb|CBI33854.3| unnamed protein product [Vitis vinifera]
          Length = 767

 Score =  232 bits (591), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 154/559 (27%), Positives = 275/559 (49%), Gaps = 25/559 (4%)

Query: 7   FRCLFSSETVSKVKLSSLFKSPRQIAA---VSSPETQLNEFLHENCKSGIINLNEARYFF 63
            +CL  +E   +  L SLF+  +       V +    +N +   N     I+  +A    
Sbjct: 221 LKCL--AEANRREFLRSLFEEMKSTGPPPNVFTYTIMMNFYCKGNFGEADIDTRQATEIL 278

Query: 64  GYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNK 123
             M     SP + +++     + +  + ++ + F R L+S   L +    N +I+     
Sbjct: 279 EEMERNGESPTVVTYSTYIYGLCRVGYVESALDFVRSLISANGLVNVYCYNAIIH----- 333

Query: 124 ERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDY 183
             GLC +  + EA  + + M + G+ PDV TY  LI+GFC+ G++   L L ++M   + 
Sbjct: 334 --GLCKKGELDEALKVLEEMKSCGISPDVYTYSILIHGFCKQGDVEKGLYLIEEMKYSNM 391

Query: 184 ENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGN 243
           E  L+S      YS +   LCK+ L D + ++F ++   G        + LI GFC  G+
Sbjct: 392 EPSLVS------YSSLFHGLCKKRLSDISLDIFRDLGAAGYKYDQTAYSILIKGFCMQGD 445

Query: 244 WEEVNGLFIEML--DLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTY 301
            +  + L  EM+  +L P P+   F  ++   CK G    A     +M++ G+ P   T 
Sbjct: 446 LDSAHKLMEEMVRNNLAPDPS--NFESLVHGFCKMGLWVNALEFFNMMLEGGILPSIATC 503

Query: 302 NSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIIS 361
           N ++D +C  GR++ A  +   M ++G    + +YN +IN  CK    E A+ L+  ++ 
Sbjct: 504 NVIIDAHCREGRVEEALNLMNEMQTQGIFPNLFTYNAVINRLCKERKSERALELFPLMLK 563

Query: 362 NGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQE 421
             V  +V+ Y+TL+ G  +   +  A  L+  M    V PD+  Y ILI+ LC  + + E
Sbjct: 564 RNVLPSVVVYSTLIDGFAKQSNSQKALMLYARMLKIGVTPDMVAYTILINILCHRSRMCE 623

Query: 422 AVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIH 481
           A  LF  +  N        +  +I G C+ G +  AW LF+++ Q+G +PTVVTY+ ++ 
Sbjct: 624 AYNLFKKMTENGMTPDKISYTSVIAGFCRIGDMRKAWALFNEMLQRGHLPTVVTYTSLVD 683

Query: 482 GLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNL 541
           G C+  +++ A+  +  M++ G  P+VVT+N L+    +     K +E+L++M   E  +
Sbjct: 684 GYCKMNRIDIADMLIDEMKRKGITPDVVTYNVLIAAHRRRGNLDKALEMLNEMK--ENGV 741

Query: 542 VPDDTTFSIVVDLLAKDEK 560
           +PD  T+ ++++ L K +K
Sbjct: 742 LPDHMTY-MMLEWLLKAKK 759



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 132/479 (27%), Positives = 246/479 (51%), Gaps = 13/479 (2%)

Query: 77  SFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILIN--CFGNKERGLCVENRIK 134
           S N L   +A+    + + S + ++ S G  P+  T  I++N  C GN       +   +
Sbjct: 216 SCNFLLKCLAEANRREFLRSLFEEMKSTGPPPNVFTYTIMMNFYCKGNFGEA---DIDTR 272

Query: 135 EATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIF 194
           +AT + + M   G  P V+TY T I G CR G +  AL   + ++S    NGL+   N++
Sbjct: 273 QATEILEEMERNGESPTVVTYSTYIYGLCRVGYVESALDFVRSLISA---NGLV---NVY 326

Query: 195 SYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEM 254
            Y+ II  LCK+G +D+A ++  EMK  GI+P V   + LIHGFC  G+ E+   L  EM
Sbjct: 327 CYNAIIHGLCKKGELDEALKVLEEMKSCGISPDVYTYSILIHGFCKQGDVEKGLYLIEEM 386

Query: 255 LDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRI 314
                 P+L++++ +   LCK    + +  +   +   G   D+  Y+ L+ G+C+ G +
Sbjct: 387 KYSNMEPSLVSYSSLFHGLCKKRLSDISLDIFRDLGAAGYKYDQTAYSILIKGFCMQGDL 446

Query: 315 DTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTL 374
           D+A ++   M          ++  L++G+CK+     A+  +  ++  G+  ++ T N +
Sbjct: 447 DSAHKLMEEMVRNNLAPDPSNFESLVHGFCKMGLWVNALEFFNMMLEGGILPSIATCNVI 506

Query: 375 LSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKF 434
           +    + G+   A  L +EM+   + P+L TYN +I+ LCK    + A++LF ++     
Sbjct: 507 IDAHCREGRVEEALNLMNEMQTQGIFPNLFTYNAVINRLCKERKSERALELFPLMLKRNV 566

Query: 435 EFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKAND 494
              + +++ LIDG  K      A  L+ ++ + G+ P +V Y+I+I+ LC + ++ +A +
Sbjct: 567 LPSVVVYSTLIDGFAKQSNSQKALMLYARMLKIGVTPDMVAYTILINILCHRSRMCEAYN 626

Query: 495 FLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
               M +NG  P+ +++ +++ GF +     K   L ++M   +R  +P   T++ +VD
Sbjct: 627 LFKKMTENGMTPDKISYTSVIAGFCRIGDMRKAWALFNEML--QRGHLPTVVTYTSLVD 683



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 120/477 (25%), Positives = 221/477 (46%), Gaps = 13/477 (2%)

Query: 78  FNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEAT 137
           F+LL    A N   +  +  + +    GL     + N L+ C           NR +   
Sbjct: 182 FDLLIKVFAANSMLENAVDVFLQAKKTGLELSTRSCNFLLKCLAEA-------NRREFLR 234

Query: 138 WLFKNMIAFGVRPDVITYGTLINGFCRT--GNLSVALRLHKKMVSGDYENGLISKTNIFS 195
            LF+ M + G  P+V TY  ++N +C+   G   +  R   +++     NG      + +
Sbjct: 235 SLFEEMKSTGPPPNVFTYTIMMNFYCKGNFGEADIDTRQATEILEEMERNG--ESPTVVT 292

Query: 196 YSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEML 255
           YS  I  LC+ G V+ A +    +        V     +IHG C  G  +E   +  EM 
Sbjct: 293 YSTYIYGLCRVGYVESALDFVRSLISANGLVNVYCYNAIIHGLCKKGELDEALKVLEEMK 352

Query: 256 DLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRID 315
             G  P++ T++++I   CK G + +   L+E M    + P   +Y+SL  G C     D
Sbjct: 353 SCGISPDVYTYSILIHGFCKQGDVEKGLYLIEEMKYSNMEPSLVSYSSLFHGLCKKRLSD 412

Query: 316 TAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLL 375
            + +IF  + + G K+   +Y+ILI G+C   +++ A  L  +++ N +      + +L+
Sbjct: 413 ISLDIFRDLGAAGYKYDQTAYSILIKGFCMQGDLDSAHKLMEEMVRNNLAPDPSNFESLV 472

Query: 376 SGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFE 435
            G  + G    A + F+ M    + P ++T N++ID  C+   V+EA+ L + ++     
Sbjct: 473 HGFCKMGLWVNALEFFNMMLEGGILPSIATCNVIIDAHCREGRVEEALNLMNEMQTQGIF 532

Query: 436 FGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDF 495
             +  +N +I+ LCK  + + A ELF  + ++ ++P+VV YS +I G  ++   +KA   
Sbjct: 533 PNLFTYNAVINRLCKERKSERALELFPLMLKRNVLPSVVVYSTLIDGFAKQSNSQKALML 592

Query: 496 LLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVV 552
              M K G  P++V +  L++     ++  +   L  KM   E  + PD  +++ V+
Sbjct: 593 YARMLKIGVTPDMVAYTILINILCHRSRMCEAYNLFKKMT--ENGMTPDKISYTSVI 647



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 114/444 (25%), Positives = 206/444 (46%), Gaps = 52/444 (11%)

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
           ++  + ++I       +++ A ++FL+ K  G+  +   C  L+     A   E +  LF
Sbjct: 178 SVIVFDLLIKVFAANSMLENAVDVFLQAKKTGLELSTRSCNFLLKCLAEANRREFLRSLF 237

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGG------KINEANGLLELMIQRGLNPDRFTYNSLM 305
            EM   GP PN+ T+ +M++  CKG          +A  +LE M + G +P   TY++ +
Sbjct: 238 EEMKSTGPPPNVFTYTIMMNFYCKGNFGEADIDTRQATEILEEMERNGESPTVVTYSTYI 297

Query: 306 DGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVR 365
            G C VG +++A +   S+ S      V  YN +I+G CK   ++EA+ +  ++ S G+ 
Sbjct: 298 YGLCRVGYVESALDFVRSLISANGLVNVYCYNAIIHGLCKKGELDEALKVLEEMKSCGIS 357

Query: 366 QTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKL 425
             V TY+ L+ G  + G       L +EMK  N+EP L +Y+ L  GLCK      ++ +
Sbjct: 358 PDVYTYSILIHGFCKQGDVEKGLYLIEEMKYSNMEPSLVSYSSLFHGLCKKRLSDISLDI 417

Query: 426 FHMLEMNKFEFGIEIFNCLIDGLCKAGRLD------------------------------ 455
           F  L    +++    ++ LI G C  G LD                              
Sbjct: 418 FRDLGAAGYKYDQTAYSILIKGFCMQGDLDSAHKLMEEMVRNNLAPDPSNFESLVHGFCK 477

Query: 456 -----NAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVT 510
                NA E F+ + + G++P++ T +++I   CR+G++E+A + +  M+  G  PN+ T
Sbjct: 478 MGLWVNALEFFNMMLEGGILPSIATCNVIIDAHCREGRVEEALNLMNEMQTQGIFPNLFT 537

Query: 511 FNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKS 570
           +N +++   +  K+ + +EL   M   +RN++P    +S ++D  AK          S S
Sbjct: 538 YNAVINRLCKERKSERALELFPLML--KRNVLPSVVVYSTLIDGFAKQ---------SNS 586

Query: 571 SYRACLYVTIFQPSSLGSMIGCTV 594
                LY  + +      M+  T+
Sbjct: 587 QKALMLYARMLKIGVTPDMVAYTI 610



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 70/259 (27%), Positives = 130/259 (50%), Gaps = 11/259 (4%)

Query: 300 TYNSLMDGYCLVGRID-TAREIF--LSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLY 356
            Y  L D  C   +++  A E+F  L    K    +V+ +++LI  +     +E A+ ++
Sbjct: 143 VYALLRDIVCYYNKVNLDAFELFPILLESPKDAARSVIVFDLLIKVFAANSMLENAVDVF 202

Query: 357 RQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKN 416
            Q    G+  +  + N LL  L +A +  + + LF+EMK     P++ TY I+++  CK 
Sbjct: 203 LQAKKTGLELSTRSCNFLLKCLAEANRREFLRSLFEEMKSTGPPPNVFTYTIMMNFYCKG 262

Query: 417 NC------VQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLV 470
           N        ++A ++   +E N     +  ++  I GLC+ G +++A +    L     +
Sbjct: 263 NFGEADIDTRQATEILEEMERNGESPTVVTYSTYIYGLCRVGYVESALDFVRSLISANGL 322

Query: 471 PTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVEL 530
             V  Y+ +IHGLC+KG+L++A   L  M+  G +P+V T++ L+HGF +     K + L
Sbjct: 323 VNVYCYNAIIHGLCKKGELDEALKVLEEMKSCGISPDVYTYSILIHGFCKQGDVEKGLYL 382

Query: 531 LHKMAEPERNLVPDDTTFS 549
           + +M     N+ P   ++S
Sbjct: 383 IEEMKYS--NMEPSLVSYS 399


>gi|15238505|ref|NP_201359.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75180383|sp|Q9LSL9.1|PP445_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g65560
 gi|8978284|dbj|BAA98175.1| unnamed protein product [Arabidopsis thaliana]
 gi|110737310|dbj|BAF00601.1| hypothetical protein [Arabidopsis thaliana]
 gi|332010688|gb|AED98071.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 915

 Score =  231 bits (590), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 145/448 (32%), Positives = 229/448 (51%), Gaps = 9/448 (2%)

Query: 111 LTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSV 170
           L   ++I C+      L     + E   ++  M+   V P++ TY  ++NG+C+ GN+  
Sbjct: 177 LKYKLIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEE 236

Query: 171 ALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVV 230
           A +   K+V    E GL    + F+Y+ +I   C+   +D A ++F EM  +G     V 
Sbjct: 237 ANQYVSKIV----EAGL--DPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVA 290

Query: 231 CTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMI 290
            T LIHG C A   +E   LF++M D    P + T+ V+I  LC   + +EA  L++ M 
Sbjct: 291 YTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEME 350

Query: 291 QRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVE 350
           + G+ P+  TY  L+D  C   + + ARE+   M  KG    V++YN LINGYCK   +E
Sbjct: 351 ETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIE 410

Query: 351 EAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILI 410
           +A+ +   + S  +     TYN L+ G +       A  + ++M    V PD+ TYN LI
Sbjct: 411 DAVDVVELMESRKLSPNTRTYNELIKG-YCKSNVHKAMGVLNKMLERKVLPDVVTYNSLI 469

Query: 411 DGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLV 470
           DG C++     A +L  ++           +  +ID LCK+ R++ A +LF  L QKG+ 
Sbjct: 470 DGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVN 529

Query: 471 PTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVEL 530
           P VV Y+ +I G C+ GK+++A+  L  M    C PN +TFN L+HG   + K  +   L
Sbjct: 530 PNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLL 589

Query: 531 LHKMAEPERNLVPDDTTFSIVVDLLAKD 558
             KM +    L P  +T +I++  L KD
Sbjct: 590 EEKMVKI--GLQPTVSTDTILIHRLLKD 615



 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 156/523 (29%), Positives = 249/523 (47%), Gaps = 37/523 (7%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
           N  L+   + G+++  E +  +  M   +  P I ++N +     K  + +    +  K+
Sbjct: 187 NTLLNSLARFGLVD--EMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKI 244

Query: 102 VSIGLLPDFLTLNILINCFGNKE----------------------------RGLCVENRI 133
           V  GL PDF T   LI  +  ++                             GLCV  RI
Sbjct: 245 VEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRI 304

Query: 134 KEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNI 193
            EA  LF  M      P V TY  LI   C +   S AL L K+M     E G+  K NI
Sbjct: 305 DEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEM----EETGI--KPNI 358

Query: 194 FSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIE 253
            +Y+++IDSLC +   +KA+EL  +M  +G+ P V+    LI+G+C  G  E+   +   
Sbjct: 359 HTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVEL 418

Query: 254 MLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGR 313
           M      PN  T+N +I   CK   +++A G+L  M++R + PD  TYNSL+DG C  G 
Sbjct: 419 MESRKLSPNTRTYNELIKGYCKSN-VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGN 477

Query: 314 IDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNT 373
            D+A  +   M+ +G      +Y  +I+  CK   VEEA  L+  +   GV   V+ Y  
Sbjct: 478 FDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTA 537

Query: 374 LLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNK 433
           L+ G  +AG+   A  + ++M   N  P+  T+N LI GLC +  ++EA  L   +    
Sbjct: 538 LIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIG 597

Query: 434 FEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKAN 493
            +  +     LI  L K G  D+A+  F ++   G  P   TY+  I   CR+G+L  A 
Sbjct: 598 LQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAE 657

Query: 494 DFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAE 536
           D +  M +NG +P++ T+++L+ G+    +T+   ++L +M +
Sbjct: 658 DMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRD 700



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 136/502 (27%), Positives = 239/502 (47%), Gaps = 36/502 (7%)

Query: 36  SPETQ-LNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAV 94
           SP T+  NE +   CKS   N+++A      M   +  P + ++N L     ++ ++D+ 
Sbjct: 425 SPNTRTYNELIKGYCKS---NVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSA 481

Query: 95  ISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVIT 154
                 +   GL+PD  T   +I+        LC   R++EA  LF ++   GV P+V+ 
Sbjct: 482 YRLLSLMNDRGLVPDQWTYTSMID-------SLCKSKRVEEACDLFDSLEQKGVNPNVVM 534

Query: 155 YGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKE 214
           Y  LI+G+C+ G +  A  + +KM+S   +N L    N  +++ +I  LC +G + +A  
Sbjct: 535 YTALIDGYCKAGKVDEAHLMLEKMLS---KNCL---PNSLTFNALIHGLCADGKLKEATL 588

Query: 215 LFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLC 274
           L  +M   G+ P V   T LIH     G+++     F +ML  G +P+  T+   I   C
Sbjct: 589 LEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYC 648

Query: 275 KGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGC---KH 331
           + G++ +A  ++  M + G++PD FTY+SL+ GY  +G+ + A ++   M   GC   +H
Sbjct: 649 REGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQH 708

Query: 332 TVVSY--NILINGYCK-------------ILNVEEAMSLYRQIISNGVRQTVITYNTLLS 376
           T +S   ++L   Y K             ++  +  + L  +++ + V     +Y  L+ 
Sbjct: 709 TFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLIL 768

Query: 377 GLFQAGQAGYAQKLFDEMKL-YNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFE 435
           G+ + G    A+K+FD M+    + P    +N L+   CK     EA K+   +      
Sbjct: 769 GICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHL 828

Query: 436 FGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDF 495
             +E    LI GL K G  +    +F  L Q G     + + I+I G+ ++G +E   + 
Sbjct: 829 PQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYEL 888

Query: 496 LLYMEKNGCAPNVVTFNTLMHG 517
              MEKNGC  +  T++ L+ G
Sbjct: 889 FNVMEKNGCKFSSQTYSLLIEG 910



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 107/331 (32%), Positives = 179/331 (54%), Gaps = 3/331 (0%)

Query: 233 TLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQR 292
           TL++     G  +E+  +++EML+    PN+ T+N M++  CK G + EAN  +  +++ 
Sbjct: 188 TLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEA 247

Query: 293 GLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEA 352
           GL+PD FTY SL+ GYC    +D+A ++F  M  KGC+   V+Y  LI+G C    ++EA
Sbjct: 248 GLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEA 307

Query: 353 MSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDG 412
           M L+ ++  +    TV TY  L+  L  + +   A  L  EM+   ++P++ TY +LID 
Sbjct: 308 MDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDS 367

Query: 413 LCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPT 472
           LC     ++A +L   +        +  +N LI+G CK G +++A ++   +  + L P 
Sbjct: 368 LCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPN 427

Query: 473 VVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLH 532
             TY+ +I G C K  + KA   L  M +    P+VVT+N+L+ G  ++        LL 
Sbjct: 428 TRTYNELIKGYC-KSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLS 486

Query: 533 KMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
            M   +R LVPD  T++ ++D L K ++  E
Sbjct: 487 LMN--DRGLVPDQWTYTSMIDSLCKSKRVEE 515


>gi|302816356|ref|XP_002989857.1| hypothetical protein SELMODRAFT_45144 [Selaginella moellendorffii]
 gi|300142423|gb|EFJ09124.1| hypothetical protein SELMODRAFT_45144 [Selaginella moellendorffii]
          Length = 394

 Score =  231 bits (590), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 127/398 (31%), Positives = 215/398 (54%), Gaps = 9/398 (2%)

Query: 139 LFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSI 198
           L   M A G+ P ++T+G+LI   C     + AL++  +M+       +  K + F Y++
Sbjct: 1   LLGEMKAAGITPTIVTFGSLIRKLCELNFTNKALQIFHQMID------MKVKPDAFLYTV 54

Query: 199 IIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLG 258
           +I  LCK   +D A   F +M   G  P  V  T L+H    A  WE+ + +F EML  G
Sbjct: 55  VIGHLCKINKLDLAASYFEQMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKG 114

Query: 259 PRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAR 318
             P L+T+  +++  CK G+I++A  L+  +   G +P    Y++L+DG C   R + AR
Sbjct: 115 HSPELVTYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHEEAR 174

Query: 319 EIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGL 378
           E+F    + G    V+ Y   I+G CK   ++EA +++ ++I  G     ++YN ++  L
Sbjct: 175 ELF--EMAAGDVQDVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSL 232

Query: 379 FQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEA-VKLFHMLEMNKFEFG 437
            +  +   A++L D+       P +    +L+DGLCK+  V+EA V L  MLE       
Sbjct: 233 CKDNRVSEAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLEAGDRAPS 292

Query: 438 IEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLL 497
           +  ++ +IDGLCKA RLD+A+ +  K+ + G VP VVTY+ +I   C+ G+L++A +   
Sbjct: 293 VVTYSAVIDGLCKADRLDDAYIVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDEARELFQ 352

Query: 498 YMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMA 535
            M + GCA +VV +N L+ G+ +  K  + + ++ +MA
Sbjct: 353 RMHERGCASDVVAYNILIRGYCRAAKVDEAIAMIEEMA 390



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 114/327 (34%), Positives = 172/327 (52%), Gaps = 21/327 (6%)

Query: 39  TQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFY 98
           T L   L + CK       +    F  M     SP + ++  +     K    D  +S  
Sbjct: 88  TVLVHSLFKACK-----WEQGHQIFEEMLSKGHSPELVTYATVVNGYCKAGRIDQALSLM 142

Query: 99  RKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTL 158
           R+L   G  P     + LI+       GLC  +R +EA  LF+  +A G   DVI Y + 
Sbjct: 143 RRLKGTGRSPSGSLYSTLID-------GLCKHDRHEEARELFE--MAAGDVQDVIVYTSF 193

Query: 159 INGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLE 218
           I+G C+ G L  A  +H KM+    E G     +  SY++II SLCK+  V +AKEL  +
Sbjct: 194 ISGLCKAGKLDEAKAVHVKMI----EAG--CAPDPVSYNVIIYSLCKDNRVSEAKELMDQ 247

Query: 219 MKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPR-PNLLTFNVMIDCLCKGG 277
              R   P V VCT L+ G C +   EE   +   ML+ G R P+++T++ +ID LCK  
Sbjct: 248 AMERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLEAGDRAPSVVTYSAVIDGLCKAD 307

Query: 278 KINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYN 337
           ++++A  +L+ M + G  PD  TY +++D +C VGR+D ARE+F  MH +GC   VV+YN
Sbjct: 308 RLDDAYIVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDEARELFQRMHERGCASDVVAYN 367

Query: 338 ILINGYCKILNVEEAMSLYRQIISNGV 364
           ILI GYC+   V+EA+++  ++   G+
Sbjct: 368 ILIRGYCRAAKVDEAIAMIEEMAGRGI 394



 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 115/387 (29%), Positives = 188/387 (48%), Gaps = 36/387 (9%)

Query: 215 LFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLC 274
           L  EMK  GI P +V   +LI   C      +   +F +M+D+  +P+   + V+I  LC
Sbjct: 1   LLGEMKAAGITPTIVTFGSLIRKLCELNFTNKALQIFHQMIDMKVKPDAFLYTVVIGHLC 60

Query: 275 KGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVV 334
           K  K++ A    E M+Q G  PD+ TY  L+       + +   +IF  M SKG    +V
Sbjct: 61  KINKLDLAASYFEQMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPELV 120

Query: 335 SYNILINGYCKILNVEEAMSLYRQI---------------------------------IS 361
           +Y  ++NGYCK   +++A+SL R++                                 ++
Sbjct: 121 TYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHEEARELFEMA 180

Query: 362 NGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQE 421
            G  Q VI Y + +SGL +AG+   A+ +  +M      PD  +YN++I  LCK+N V E
Sbjct: 181 AGDVQDVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDNRVSE 240

Query: 422 AVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKG-LVPTVVTYSIMI 480
           A +L       K   G+ +   L+DGLCK+ R++ A  +  ++ + G   P+VVTYS +I
Sbjct: 241 AKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLEAGDRAPSVVTYSAVI 300

Query: 481 HGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERN 540
            GLC+  +L+ A   L  M + GC P+VVT+  ++  F +  +  +  EL  +M   ER 
Sbjct: 301 DGLCKADRLDDAYIVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDEARELFQRM--HERG 358

Query: 541 LVPDDTTFSIVVDLLAKDEKYHECSAV 567
              D   ++I++    +  K  E  A+
Sbjct: 359 CASDVVAYNILIRGYCRAAKVDEAIAM 385



 Score =  175 bits (443), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 107/409 (26%), Positives = 195/409 (47%), Gaps = 16/409 (3%)

Query: 62  FFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFG 121
             G M     +P I +F  L   + +    +  +  + +++ + + PD     ++I    
Sbjct: 1   LLGEMKAAGITPTIVTFGSLIRKLCELNFTNKALQIFHQMIDMKVKPDAFLYTVVIG--- 57

Query: 122 NKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSG 181
                LC  N++  A   F+ M+  G  PD +TY  L++   +        ++ ++M+S 
Sbjct: 58  ----HLCKINKLDLAASYFEQMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSK 113

Query: 182 DYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCA 241
            +   L++      Y+ +++  CK G +D+A  L   +KG G +P+  + +TLI G C  
Sbjct: 114 GHSPELVT------YATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKH 167

Query: 242 GNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTY 301
              EE   LF EM   G   +++ +   I  LCK GK++EA  +   MI+ G  PD  +Y
Sbjct: 168 DRHEEARELF-EMA-AGDVQDVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSY 225

Query: 302 NSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIIS 361
           N ++   C   R+  A+E+      + C   V    +L++G CK   VEEA  +  +++ 
Sbjct: 226 NVIIYSLCKDNRVSEAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLE 285

Query: 362 NGVRQ-TVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQ 420
            G R  +V+TY+ ++ GL +A +   A  +  +M+     PD+ TY  +ID  CK   + 
Sbjct: 286 AGDRAPSVVTYSAVIDGLCKADRLDDAYIVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLD 345

Query: 421 EAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGL 469
           EA +LF  +        +  +N LI G C+A ++D A  +  ++  +G+
Sbjct: 346 EARELFQRMHERGCASDVVAYNILIRGYCRAAKVDEAIAMIEEMAGRGI 394



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 93/325 (28%), Positives = 163/325 (50%), Gaps = 3/325 (0%)

Query: 250 LFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYC 309
           L  EM   G  P ++TF  +I  LC+    N+A  +   MI   + PD F Y  ++   C
Sbjct: 1   LLGEMKAAGITPTIVTFGSLIRKLCELNFTNKALQIFHQMIDMKVKPDAFLYTVVIGHLC 60

Query: 310 LVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVI 369
            + ++D A   F  M   GC    V+Y +L++   K    E+   ++ +++S G    ++
Sbjct: 61  KINKLDLAASYFEQMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPELV 120

Query: 370 TYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHML 429
           TY T+++G  +AG+   A  L   +K     P  S Y+ LIDGLCK++  +EA +LF M 
Sbjct: 121 TYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHEEARELFEMA 180

Query: 430 EMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKL 489
             +  +  + ++   I GLCKAG+LD A  +  K+ + G  P  V+Y+++I+ LC+  ++
Sbjct: 181 AGDVQD--VIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDNRV 238

Query: 490 EKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFS 549
            +A + +    +  C P V     L+ G  ++ +  +   +L +M E   +  P   T+S
Sbjct: 239 SEAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLEAG-DRAPSVVTYS 297

Query: 550 IVVDLLAKDEKYHECSAVSKSSYRA 574
            V+D L K ++  +   V +   RA
Sbjct: 298 AVIDGLCKADRLDDAYIVLQKMRRA 322


>gi|357120446|ref|XP_003561938.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Brachypodium distachyon]
          Length = 787

 Score =  231 bits (590), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 155/551 (28%), Positives = 257/551 (46%), Gaps = 38/551 (6%)

Query: 4   RTQFRCLFSSETVSKVKLSSLFKSPRQIAAVSSPETQLNEF------------------L 45
           R + R   S +  + V LS+L +SP      +SP+  L+ F                  +
Sbjct: 158 RRRVRVRPSLQAANAV-LSALARSPS-----TSPQASLDAFRSIVALRLHPNHYTFNLLV 211

Query: 46  HENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIG 105
           H +C  G   L +A      M     SP   ++N L  A  +        +   ++   G
Sbjct: 212 HTHCSKG--TLADALSTLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKKDG 269

Query: 106 LLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRT 165
           + P   T N L++ +            IK+AT + + M A G  PD+ TY  L  G C+ 
Sbjct: 270 VAPTRPTYNTLVSAYARL-------GWIKQATKVVEAMTANGFEPDLWTYNVLAAGLCQA 322

Query: 166 GNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGIN 225
           G +  A RL  +M     E       ++ +Y+ + D+  K      A  L  EM+ +G+ 
Sbjct: 323 GKVDEAFRLKDEM-----ERLGTLLPDVVTYNTLADACFKCRCSSDALRLLEEMREKGVK 377

Query: 226 PAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGL 285
             +V    +I G C  G  E   G   +M D G  P+++T+N +I   CK G I +A  L
Sbjct: 378 ATLVTHNIVIKGLCKDGELEGALGCLNKMADDGLAPDVITYNTLIHAHCKAGNIAKAYTL 437

Query: 286 LELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCK 345
           ++ M++RGL  D FT N+++   C   R + A+ +  S   +G     VSY  ++  Y K
Sbjct: 438 MDEMVRRGLKLDTFTLNTVLYNLCKEKRYEEAQGLLQSPPQRGFMPDEVSYGTVMAAYFK 497

Query: 346 ILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLST 405
             N E A+ L+ ++I   +  ++ TYNTL+ GL + G+   A    +E+    + PD +T
Sbjct: 498 EYNSEPALRLWDEMIEKKLTPSISTYNTLIKGLSRMGRLKEAIDKLNELMEKGLVPDDTT 557

Query: 406 YNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLP 465
           YNI+I   CK   ++ A +  + +  N F+  +   N L++GLC  G+LD A +LF    
Sbjct: 558 YNIIIHAYCKEGDLENAFQFHNKMVENSFKPDVVTCNTLMNGLCLNGKLDKALKLFESWV 617

Query: 466 QKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTS 525
           +KG    V+TY+ +I  +C+ G ++ A  F   ME  G  P+  T+N ++    +  +T 
Sbjct: 618 EKGKKVDVITYNTLIQTMCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRTE 677

Query: 526 KVVELLHKMAE 536
           +   +LHK+AE
Sbjct: 678 EAQNMLHKLAE 688



 Score =  205 bits (521), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 154/553 (27%), Positives = 242/553 (43%), Gaps = 86/553 (15%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
           N  L+ +C+ G+  L EAR     M     +P   ++N L  A A+             +
Sbjct: 243 NTLLNAHCRKGM--LGEARALLARMKKDGVAPTRPTYNTLVSAYARLGWIKQATKVVEAM 300

Query: 102 VSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFG-VRPDVITYGTLIN 160
            + G  PD  T N+L         GLC   ++ EA  L   M   G + PDV+TY TL +
Sbjct: 301 TANGFEPDLWTYNVLAA-------GLCQAGKVDEAFRLKDEMERLGTLLPDVVTYNTLAD 353

Query: 161 GFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMK 220
              +    S ALRL ++M     E G+  K  + +++I+I  LCK+G ++ A     +M 
Sbjct: 354 ACFKCRCSSDALRLLEEM----REKGV--KATLVTHNIVIKGLCKDGELEGALGCLNKMA 407

Query: 221 GRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKIN 280
             G+ P V+   TLIH  C AGN  +   L  EM+  G + +  T N ++  LCK  +  
Sbjct: 408 DDGLAPDVITYNTLIHAHCKAGNIAKAYTLMDEMVRRGLKLDTFTLNTVLYNLCKEKRYE 467

Query: 281 EANGLLELMIQRGLNPDRF-----------------------------------TYNSLM 305
           EA GLL+   QRG  PD                                     TYN+L+
Sbjct: 468 EAQGLLQSPPQRGFMPDEVSYGTVMAAYFKEYNSEPALRLWDEMIEKKLTPSISTYNTLI 527

Query: 306 DGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVR 365
            G   +GR+  A +    +  KG      +YNI+I+ YCK  ++E A   + +++ N  +
Sbjct: 528 KGLSRMGRLKEAIDKLNELMEKGLVPDDTTYNIIIHAYCKEGDLENAFQFHNKMVENSFK 587

Query: 366 QTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKL 425
             V+T NTL++GL   G+   A KLF+       + D+ TYN LI  +CK+  V  A+  
Sbjct: 588 PDVVTCNTLMNGLCLNGKLDKALKLFESWVEKGKKVDVITYNTLIQTMCKDGDVDTALHF 647

Query: 426 FHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKG----------LVPTVV- 474
           F  +E    +     +N ++  L +AGR + A  + HKL + G          L P+ V 
Sbjct: 648 FADMEARGLQPDAFTYNVVLSALSEAGRTEEAQNMLHKLAESGTLSQSFSSPLLKPSSVD 707

Query: 475 ------------------------TYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVT 510
                                    Y+ +++GLC  G+ ++A   L  M + G + +  T
Sbjct: 708 EAESGKDAKTEEETVENPQDSASEAYTKLVNGLCTSGQFKEAKAILDEMMQKGMSVDSST 767

Query: 511 FNTLMHGFLQNNK 523
           + TLM G ++  K
Sbjct: 768 YITLMEGLVKRQK 780



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 134/493 (27%), Positives = 209/493 (42%), Gaps = 99/493 (20%)

Query: 148 VRPDVITYGTLINGFCRTGNLS-----------VALRLHKKMVSGDYENGLISKTNIFSY 196
           VRP +     +++   R+ + S           VALRLH                N +++
Sbjct: 163 VRPSLQAANAVLSALARSPSTSPQASLDAFRSIVALRLHP---------------NHYTF 207

Query: 197 SIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLD 256
           ++++ + C +G +  A      M+G G++P  V   TL++  C  G   E   L   M  
Sbjct: 208 NLLVHTHCSKGTLADALSTLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKK 267

Query: 257 LGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDT 316
            G  P   T+N ++    + G I +A  ++E M   G  PD +TYN L  G C  G++D 
Sbjct: 268 DGVAPTRPTYNTLVSAYARLGWIKQATKVVEAMTANGFEPDLWTYNVLAAGLCQAGKVDE 327

Query: 317 ------------------------------------AREIFLSMHSKGCKHTVVSYNILI 340
                                               A  +   M  KG K T+V++NI+I
Sbjct: 328 AFRLKDEMERLGTLLPDVVTYNTLADACFKCRCSSDALRLLEEMREKGVKATLVTHNIVI 387

Query: 341 NGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVE 400
            G CK   +E A+    ++  +G+   VITYNTL+    +AG    A  L DEM    ++
Sbjct: 388 KGLCKDGELEGALGCLNKMADDGLAPDVITYNTLIHAHCKAGNIAKAYTLMDEMVRRGLK 447

Query: 401 PDLSTYNILIDGLCKNNCVQE-----------------------------------AVKL 425
            D  T N ++  LCK    +E                                   A++L
Sbjct: 448 LDTFTLNTVLYNLCKEKRYEEAQGLLQSPPQRGFMPDEVSYGTVMAAYFKEYNSEPALRL 507

Query: 426 FHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCR 485
           +  +   K    I  +N LI GL + GRL  A +  ++L +KGLVP   TY+I+IH  C+
Sbjct: 508 WDEMIEKKLTPSISTYNTLIKGLSRMGRLKEAIDKLNELMEKGLVPDDTTYNIIIHAYCK 567

Query: 486 KGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDD 545
           +G LE A  F   M +N   P+VVT NTLM+G   N K  K ++L     E  + +  D 
Sbjct: 568 EGDLENAFQFHNKMVENSFKPDVVTCNTLMNGLCLNGKLDKALKLFESWVEKGKKV--DV 625

Query: 546 TTFSIVVDLLAKD 558
            T++ ++  + KD
Sbjct: 626 ITYNTLIQTMCKD 638


>gi|302775252|ref|XP_002971043.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
 gi|300161025|gb|EFJ27641.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
          Length = 457

 Score =  231 bits (590), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 135/459 (29%), Positives = 233/459 (50%), Gaps = 19/459 (4%)

Query: 105 GLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCR 164
           G  P+ +T N L+N F         + R  +   L + M A G++P+V++Y  L+ G C+
Sbjct: 5   GCPPNSVTFNALVNGFSK-------QGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCK 57

Query: 165 TGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGI 224
                 A  L + M+S     G  S  ++ +YS ++   CK G V++++EL  E+  RG+
Sbjct: 58  LERWHEAEELVRDMIS----RGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGL 113

Query: 225 NPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANG 284
            P  ++ T ++   C +    E   L  EM+  G  P L+TFN +I   C+   +  A+ 
Sbjct: 114 RPDALMYTKVMASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADS 173

Query: 285 LLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYC 344
           LL+ M   G+  D  TYN+LMDG C  GR+  A ++   M + GC   VV+Y+  + G C
Sbjct: 174 LLQTMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLC 233

Query: 345 KILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYN-VEPDL 403
           K   V  A  +  Q+  +     V+TYNT+L GL ++G+   A ++ ++M   +    ++
Sbjct: 234 KSGKVLNAHQVLEQMRDSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNV 293

Query: 404 STYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHK 463
             Y+ ++DGLCK    QEA  +   +        +  ++ L++GLCKAG+++ A E   +
Sbjct: 294 VGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVRE 353

Query: 464 LPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYM-----EKNGCAPNVVTFNTLMHGF 518
           +  +G  P  VTY  ++HGLC  G+L +A   +  M       + C P+V T+N L+ G 
Sbjct: 354 MAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGDHCPPSVSTYNALIGGL 413

Query: 519 LQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAK 557
            +  +    ++   +M    +   PD  ++S +V+ LA+
Sbjct: 414 CKAGRIDDALKFFQRMR--SQGCDPDGVSYSTIVEGLAR 450



 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 140/461 (30%), Positives = 237/461 (51%), Gaps = 22/461 (4%)

Query: 73  PPIS-SFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVEN 131
           PP S +FN L    +K             + + G+ P+ ++ N L+        GLC   
Sbjct: 7   PPNSVTFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLE-------GLCKLE 59

Query: 132 RIKEATWLFKNMIAFGVR--PDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLIS 189
           R  EA  L ++MI+ G R  PD++TY TL++G+C+ G +  +  L K+++S     GL  
Sbjct: 60  RWHEAEELVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVIS----RGL-- 113

Query: 190 KTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNG 249
           + +   Y+ ++ SLCK   + +A EL  EM   G  P ++   TLI G C   N E  + 
Sbjct: 114 RPDALMYTKVMASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADS 173

Query: 250 LFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYC 309
           L   M   G + +++T+N ++D LCK G++ EA  LLE M   G  PD   Y+S + G C
Sbjct: 174 LLQTMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLC 233

Query: 310 LVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIIS-NGVRQTV 368
             G++  A ++   M        VV+YN +++G CK   ++ A+ +  Q+ S +G    V
Sbjct: 234 KSGKVLNAHQVLEQMRDSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNV 293

Query: 369 ITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHM 428
           + Y+T++ GL + G+   A+ + + M      PD+ TY+ L++GLCK   ++EAV+    
Sbjct: 294 VGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVRE 353

Query: 429 LEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLV-----PTVVTYSIMIHGL 483
           + M   +     +  L+ GLC  GRL  A  +  ++   G       P+V TY+ +I GL
Sbjct: 354 MAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGDHCPPSVSTYNALIGGL 413

Query: 484 CRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKT 524
           C+ G+++ A  F   M   GC P+ V+++T++ G  ++ + 
Sbjct: 414 CKAGRIDDALKFFQRMRSQGCDPDGVSYSTIVEGLARSGRA 454



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 108/355 (30%), Positives = 188/355 (52%), Gaps = 38/355 (10%)

Query: 219 MKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGK 278
           M   G  P  V    L++GF   G   +   L   M   G +PN++++N +++ LCK  +
Sbjct: 1   MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLER 60

Query: 279 INEANGLLELMIQRG--LNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSK--------- 327
            +EA  L+  MI RG    PD  TY++L+ GYC  G+++ +RE+   + S+         
Sbjct: 61  WHEAEELVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMY 120

Query: 328 --------------------------GCKHTVVSYNILINGYCKILNVEEAMSLYRQIIS 361
                                     GC  T++++N LI+G C+  N+E A SL + + +
Sbjct: 121 TKVMASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAA 180

Query: 362 NGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQE 421
           +GV+  V+TYNTL+ GL +AG+   A++L + MK     PD+  Y+  + GLCK+  V  
Sbjct: 181 SGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLN 240

Query: 422 AVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQK-GLVPTVVTYSIMI 480
           A ++   +  +  +  +  +N ++DGLCK+G++D A E+  ++    G    VV YS ++
Sbjct: 241 AHQVLEQMRDSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVV 300

Query: 481 HGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMA 535
            GLC+ G+ ++A   +  M + GC P+VVT+++L++G  +  K  + VE + +MA
Sbjct: 301 DGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMA 355



 Score =  191 bits (485), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 113/334 (33%), Positives = 183/334 (54%), Gaps = 9/334 (2%)

Query: 258 GPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTA 317
           G  PN +TFN +++   K G+  +   LLE M  RG+ P+  +YN L++G C + R   A
Sbjct: 5   GCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLERWHEA 64

Query: 318 REIFLSMHSKGCKHT--VVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLL 375
            E+   M S+G + T  +V+Y+ L++GYCK   VEE+  L +++IS G+R   + Y  ++
Sbjct: 65  EELVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVM 124

Query: 376 SGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFE 435
           + L ++ + G A +L +EM      P L T+N LI G C+   ++ A  L   +  +  +
Sbjct: 125 ASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAASGVK 184

Query: 436 FGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDF 495
             +  +N L+DGLCKAGRL  A +L  ++   G  P VV YS  ++GLC+ GK+  A+  
Sbjct: 185 ADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLNAHQV 244

Query: 496 LLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPER---NLVPDDTTFSIVV 552
           L  M  +   PNVVT+NT++ G  ++ K    +E++ +MA  +    N+V     +S VV
Sbjct: 245 LEQMRDSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVV----GYSTVV 300

Query: 553 DLLAKDEKYHECSAVSKSSYRACLYVTIFQPSSL 586
           D L K  +  E  +V ++  RA     +   SSL
Sbjct: 301 DGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSL 334



 Score = 48.9 bits (115), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 26/100 (26%), Positives = 46/100 (46%)

Query: 464 LPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNK 523
           + + G  P  VT++ +++G  ++G+       L  M   G  PNVV++N L+ G  +  +
Sbjct: 1   MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLER 60

Query: 524 TSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
             +  EL+  M        PD  T+S ++    K  K  E
Sbjct: 61  WHEAEELVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEE 100


>gi|242055005|ref|XP_002456648.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
 gi|241928623|gb|EES01768.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
          Length = 702

 Score =  231 bits (590), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 144/482 (29%), Positives = 249/482 (51%), Gaps = 18/482 (3%)

Query: 78  FNLLFGAVAKNRHYDAVISFYRKLV-SIGLLPDFLTLNILINCFGNKERGLCVENRIKEA 136
           +N L     +   ++  +  + +LV   G  P+  T  ++++       GLC   R KEA
Sbjct: 231 YNALLSGCFRTGMFEKAMKVWEQLVRDPGASPNLATYKVMLD-------GLCKLGRFKEA 283

Query: 137 TWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSY 196
             ++  M+A   + D +TYG LI+G CR+G++  A R++  MV      GL+   ++  Y
Sbjct: 284 GEVWSRMMANNHQADTVTYGILIHGLCRSGDVDSAARVYSDMVKA----GLVLDVSV--Y 337

Query: 197 SIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEML- 255
           + +I   C+ G   +A + +      GI   +     +  G   +G   E   L  ++  
Sbjct: 338 NSLIKGFCEVGRTGEAWKFWDSTGFSGIR-QITTYNIMTKGLLDSGMVSEATELLKQLEN 396

Query: 256 DLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRID 315
           D    P+ +TF  +I  LC+ G  N A  +LE     G   D F+Y+S+++ +C  GR  
Sbjct: 397 DASCSPDKVTFGTLIHGLCENGYANRAFEILEDARNSGEELDVFSYSSMINRFCKDGRTH 456

Query: 316 TAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLL 375
            A E++ +M   GCK     YN LING+C++  + +A+ +Y ++ SNG   T+ITYNTL+
Sbjct: 457 DANEVYKNMVKDGCKPNSHVYNALINGFCRVSKINDAIKIYIEMTSNGCCPTIITYNTLI 516

Query: 376 SGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFE 435
            GL +A +   A  L  EM     +PD+ TY  LI GLC++  V  A++++  +     +
Sbjct: 517 DGLCKAEKYQEASSLTKEMLERGFKPDIRTYASLIRGLCRDKKVDVALRIWDEILDAGLQ 576

Query: 436 FGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDF 495
             + + N LI GLC AG++D A+ ++ ++ +K   P +VTY+ ++ G    G ++KA   
Sbjct: 577 VDVMVHNILIHGLCSAGKVDEAFCIYLEMKEKNCSPNLVTYNTLMDGFYEIGSIDKAASL 636

Query: 496 LLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLL 555
              +  NG  P++VT+NT + G    N+T + V LL+++      ++P   T+SI+V  +
Sbjct: 637 WTAILDNGLKPDIVTYNTRIKGLCSCNRTPEGVLLLNEVLAT--GIMPTVITWSILVRAV 694

Query: 556 AK 557
            K
Sbjct: 695 IK 696



 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 153/547 (27%), Positives = 248/547 (45%), Gaps = 78/547 (14%)

Query: 72  SPPISSFNLLFGAVAKNRHYDAVISFYRKLV--SIG--LLPDFLTLNILINCFGNKERGL 127
           +P + S N L  A  + R Y    +F+  L   + G  + P+  T NI++       R L
Sbjct: 116 NPGVRSHNTLLDAFVRARRYSDADAFFASLSHGAFGRRIAPNLQTYNIIL-------RSL 168

Query: 128 CVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKM--------- 178
           C    +  A  LF ++   GV PD +TY TL++G  +   L  AL L  +M         
Sbjct: 169 CARGDVDRAVSLFSSLRRRGVAPDRVTYSTLMSGLAKHDQLDNALDLLDEMPNYGVQADA 228

Query: 179 ------VSGDYENGLISKT---------------NIFSYSIIIDSLCKEGLVDKAKELFL 217
                 +SG +  G+  K                N+ +Y +++D LCK G   +A E++ 
Sbjct: 229 VCYNALLSGCFRTGMFEKAMKVWEQLVRDPGASPNLATYKVMLDGLCKLGRFKEAGEVWS 288

Query: 218 EMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGG 277
            M         V    LIHG C +G+ +    ++ +M+  G   ++  +N +I   C+ G
Sbjct: 289 RMMANNHQADTVTYGILIHGLCRSGDVDSAARVYSDMVKAGLVLDVSVYNSLIKGFCEVG 348

Query: 278 KINEA----------------------NGLL---------ELMIQ----RGLNPDRFTYN 302
           +  EA                       GLL         EL+ Q       +PD+ T+ 
Sbjct: 349 RTGEAWKFWDSTGFSGIRQITTYNIMTKGLLDSGMVSEATELLKQLENDASCSPDKVTFG 408

Query: 303 SLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISN 362
           +L+ G C  G  + A EI     + G +  V SY+ +IN +CK     +A  +Y+ ++ +
Sbjct: 409 TLIHGLCENGYANRAFEILEDARNSGEELDVFSYSSMINRFCKDGRTHDANEVYKNMVKD 468

Query: 363 GVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEA 422
           G +     YN L++G  +  +   A K++ EM      P + TYN LIDGLCK    QEA
Sbjct: 469 GCKPNSHVYNALINGFCRVSKINDAIKIYIEMTSNGCCPTIITYNTLIDGLCKAEKYQEA 528

Query: 423 VKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHG 482
             L   +    F+  I  +  LI GLC+  ++D A  ++ ++   GL   V+ ++I+IHG
Sbjct: 529 SSLTKEMLERGFKPDIRTYASLIRGLCRDKKVDVALRIWDEILDAGLQVDVMVHNILIHG 588

Query: 483 LCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLV 542
           LC  GK+++A    L M++  C+PN+VT+NTLM GF +     K   L   +   +  L 
Sbjct: 589 LCSAGKVDEAFCIYLEMKEKNCSPNLVTYNTLMDGFYEIGSIDKAASLWTAIL--DNGLK 646

Query: 543 PDDTTFS 549
           PD  T++
Sbjct: 647 PDIVTYN 653



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 126/426 (29%), Positives = 215/426 (50%), Gaps = 7/426 (1%)

Query: 146 FGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCK 205
            G  P V ++ TL++ F R    S A      +  G +  G     N+ +Y+II+ SLC 
Sbjct: 113 LGCNPGVRSHNTLLDAFVRARRYSDADAFFASLSHGAF--GRRIAPNLQTYNIILRSLCA 170

Query: 206 EGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLT 265
            G VD+A  LF  ++ RG+ P  V  +TL+ G       +    L  EM + G + + + 
Sbjct: 171 RGDVDRAVSLFSSLRRRGVAPDRVTYSTLMSGLAKHDQLDNALDLLDEMPNYGVQADAVC 230

Query: 266 FNVMIDCLCKGGKINEANGLLELMIQR-GLNPDRFTYNSLMDGYCLVGRIDTAREIFLSM 324
           +N ++    + G   +A  + E +++  G +P+  TY  ++DG C +GR   A E++  M
Sbjct: 231 YNALLSGCFRTGMFEKAMKVWEQLVRDPGASPNLATYKVMLDGLCKLGRFKEAGEVWSRM 290

Query: 325 HSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQA 384
            +   +   V+Y ILI+G C+  +V+ A  +Y  ++  G+   V  YN+L+ G  + G+ 
Sbjct: 291 MANNHQADTVTYGILIHGLCRSGDVDSAARVYSDMVKAGLVLDVSVYNSLIKGFCEVGRT 350

Query: 385 GYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEI-FNC 443
           G A K +D      +   ++TYNI+  GL  +  V EA +L   LE +      ++ F  
Sbjct: 351 GEAWKFWDSTGFSGIR-QITTYNIMTKGLLDSGMVSEATELLKQLENDASCSPDKVTFGT 409

Query: 444 LIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNG 503
           LI GLC+ G  + A+E+       G    V +YS MI+  C+ G+   AN+    M K+G
Sbjct: 410 LIHGLCENGYANRAFEILEDARNSGEELDVFSYSSMINRFCKDGRTHDANEVYKNMVKDG 469

Query: 504 CAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
           C PN   +N L++GF + +K +  +++  +M        P   T++ ++D L K EKY E
Sbjct: 470 CKPNSHVYNALINGFCRVSKINDAIKIYIEMT--SNGCCPTIITYNTLIDGLCKAEKYQE 527

Query: 564 CSAVSK 569
            S+++K
Sbjct: 528 ASSLTK 533



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 120/442 (27%), Positives = 207/442 (46%), Gaps = 15/442 (3%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CK G     EA   +  M          ++ +L   + ++   D+    Y  +V  GL+ 
Sbjct: 275 CKLG--RFKEAGEVWSRMMANNHQADTVTYGILIHGLCRSGDVDSAARVYSDMVKAGLVL 332

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           D    N LI       +G C   R  EA W F +   F     + TY  +  G   +G +
Sbjct: 333 DVSVYNSLI-------KGFCEVGRTGEA-WKFWDSTGFSGIRQITTYNIMTKGLLDSGMV 384

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
           S A  L K++     EN      +  ++  +I  LC+ G  ++A E+  + +  G    V
Sbjct: 385 SEATELLKQL-----ENDASCSPDKVTFGTLIHGLCENGYANRAFEILEDARNSGEELDV 439

Query: 229 VVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLEL 288
              +++I+ FC  G   + N ++  M+  G +PN   +N +I+  C+  KIN+A  +   
Sbjct: 440 FSYSSMINRFCKDGRTHDANEVYKNMVKDGCKPNSHVYNALINGFCRVSKINDAIKIYIE 499

Query: 289 MIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILN 348
           M   G  P   TYN+L+DG C   +   A  +   M  +G K  + +Y  LI G C+   
Sbjct: 500 MTSNGCCPTIITYNTLIDGLCKAEKYQEASSLTKEMLERGFKPDIRTYASLIRGLCRDKK 559

Query: 349 VEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNI 408
           V+ A+ ++ +I+  G++  V+ +N L+ GL  AG+   A  ++ EMK  N  P+L TYN 
Sbjct: 560 VDVALRIWDEILDAGLQVDVMVHNILIHGLCSAGKVDEAFCIYLEMKEKNCSPNLVTYNT 619

Query: 409 LIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKG 468
           L+DG  +   + +A  L+  +  N  +  I  +N  I GLC   R      L +++   G
Sbjct: 620 LMDGFYEIGSIDKAASLWTAILDNGLKPDIVTYNTRIKGLCSCNRTPEGVLLLNEVLATG 679

Query: 469 LVPTVVTYSIMIHGLCRKGKLE 490
           ++PTV+T+SI++  + + G ++
Sbjct: 680 IMPTVITWSILVRAVIKYGPIQ 701



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 108/380 (28%), Positives = 191/380 (50%), Gaps = 10/380 (2%)

Query: 198 IIIDSLCKEGLVDKAKELFLEMKGR-GINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLD 256
           +++ +  +  + D A   F ++    G NP V    TL+  F  A  + + +  F  +  
Sbjct: 88  VVLSAFSRALMPDAALAAFRDLPSLLGCNPGVRSHNTLLDAFVRARRYSDADAFFASLSH 147

Query: 257 --LGPR--PNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
              G R  PNL T+N+++  LC  G ++ A  L   + +RG+ PDR TY++LM G     
Sbjct: 148 GAFGRRIAPNLQTYNIILRSLCARGDVDRAVSLFSSLRRRGVAPDRVTYSTLMSGLAKHD 207

Query: 313 RIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISN-GVRQTVITY 371
           ++D A ++   M + G +   V YN L++G  +    E+AM ++ Q++ + G    + TY
Sbjct: 208 QLDNALDLLDEMPNYGVQADAVCYNALLSGCFRTGMFEKAMKVWEQLVRDPGASPNLATY 267

Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
             +L GL + G+   A +++  M   N + D  TY ILI GLC++  V  A +++  +  
Sbjct: 268 KVMLDGLCKLGRFKEAGEVWSRMMANNHQADTVTYGILIHGLCRSGDVDSAARVYSDMVK 327

Query: 432 NKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEK 491
                 + ++N LI G C+ GR   AW+ +      G +  + TY+IM  GL   G + +
Sbjct: 328 AGLVLDVSVYNSLIKGFCEVGRTGEAWKFWDSTGFSG-IRQITTYNIMTKGLLDSGMVSE 386

Query: 492 ANDFLLYMEKNG-CAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSI 550
           A + L  +E +  C+P+ VTF TL+HG  +N   ++  E+L         L  D  ++S 
Sbjct: 387 ATELLKQLENDASCSPDKVTFGTLIHGLCENGYANRAFEILEDARNSGEEL--DVFSYSS 444

Query: 551 VVDLLAKDEKYHECSAVSKS 570
           +++   KD + H+ + V K+
Sbjct: 445 MINRFCKDGRTHDANEVYKN 464



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 35/129 (27%), Positives = 57/129 (44%), Gaps = 9/129 (6%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
           N  +H  C +G   ++EA   +  M     SP + ++N L     +    D   S +  +
Sbjct: 583 NILIHGLCSAG--KVDEAFCIYLEMKEKNCSPNLVTYNTLMDGFYEIGSIDKAASLWTAI 640

Query: 102 VSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLING 161
           +  GL PD +T N  I       +GLC  NR  E   L   ++A G+ P VIT+  L+  
Sbjct: 641 LDNGLKPDIVTYNTRI-------KGLCSCNRTPEGVLLLNEVLATGIMPTVITWSILVRA 693

Query: 162 FCRTGNLSV 170
             + G + +
Sbjct: 694 VIKYGPIQI 702


>gi|356505993|ref|XP_003521773.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic-like [Glycine max]
          Length = 570

 Score =  231 bits (590), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 147/506 (29%), Positives = 239/506 (47%), Gaps = 49/506 (9%)

Query: 29  RQIAAVSSPETQLNEF--------LHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNL 80
           R +++VS P+T   +F        L  +CK+G  N NE+ YF  ++ +    P +     
Sbjct: 40  RTLSSVSKPQTHTLDFKDTHLLKSLSRSCKAG--NFNESLYFLRHLVNKGHKPDVVLCTK 97

Query: 81  LFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLF 140
           L   +  ++  D  I     L + G  PD +  N +I        G C  NRI  A  + 
Sbjct: 98  LIHGLFTSKTIDKAIQVMHILENHGH-PDLIAYNAIIT-------GFCRANRIDSAYQVL 149

Query: 141 KNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKT--------- 191
             M   G  PD++TY  LI   C  G L  AL    +++  + +  +++ T         
Sbjct: 150 DRMKNKGFSPDIVTYNILIGSLCSRGMLDSALEFKNQLLKENCKPTVVTYTILIEATLLQ 209

Query: 192 --------------------NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVC 231
                               ++F+Y+ II  +C+EG VD+A ++   +  +G  P V+  
Sbjct: 210 GGIDEAMKLLDEMLEINLQPDMFTYNSIIRGMCREGYVDRAFQIISSISSKGYAPDVITY 269

Query: 232 TTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQ 291
             L+ G    G WE    L  +M+  G   N++T++V+I  +C+ GK+ E  GLL+ M +
Sbjct: 270 NILLRGLLNQGKWEAGYELMSDMVARGCEANVVTYSVLISSVCRDGKVEEGVGLLKDMKK 329

Query: 292 RGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEE 351
           +GL PD + Y+ L+   C  GR+D A E+   M S GC   +V+YN ++   CK    +E
Sbjct: 330 KGLKPDGYCYDPLIAALCKEGRVDLAIEVLDVMISDGCVPDIVNYNTILACLCKQKRADE 389

Query: 352 AMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILID 411
           A+S++ ++   G      +YN++ S L+  G    A  +  EM    V+PD  TYN LI 
Sbjct: 390 ALSIFEKLGEVGCSPNASSYNSMFSALWSTGHKVRALGMILEMLDKGVDPDGITYNSLIS 449

Query: 412 GLCKNNCVQEAVKLFHMLEMNKFEFGIEI--FNCLIDGLCKAGRLDNAWELFHKLPQKGL 469
            LC++  V EA++L   +EM   E    +  +N ++ GLCK  R+ +A E+   +  KG 
Sbjct: 450 CLCRDGMVDEAIELLVDMEMESSECKPSVVSYNIVLLGLCKVSRVSDAIEVLAAMVDKGC 509

Query: 470 VPTVVTYSIMIHGLCRKGKLEKANDF 495
            P   TY+ +I G+   G L  A D 
Sbjct: 510 RPNETTYTFLIEGIGFGGCLNDARDL 535



 Score =  188 bits (478), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 122/463 (26%), Positives = 223/463 (48%), Gaps = 46/463 (9%)

Query: 128 CVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGL 187
           C      E+ +  ++++  G +PDV+    LI+G   +  +  A+++   +     EN  
Sbjct: 68  CKAGNFNESLYFLRHLVNKGHKPDVVLCTKLIHGLFTSKTIDKAIQVMHIL-----ENH- 121

Query: 188 ISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEV 247
               ++ +Y+ II   C+   +D A ++   MK +G +P +V    LI   C  G  +  
Sbjct: 122 -GHPDLIAYNAIITGFCRANRIDSAYQVLDRMKNKGFSPDIVTYNILIGSLCSRGMLDSA 180

Query: 248 NGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDG 307
                ++L    +P ++T+ ++I+     G I+EA  LL+ M++  L PD FTYNS++ G
Sbjct: 181 LEFKNQLLKENCKPTVVTYTILIEATLLQGGIDEAMKLLDEMLEINLQPDMFTYNSIIRG 240

Query: 308 YCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQT 367
            C  G +D A +I  S+ SKG    V++YNIL+ G       E    L   +++ G    
Sbjct: 241 MCREGYVDRAFQIISSISSKGYAPDVITYNILLRGLLNQGKWEAGYELMSDMVARGCEAN 300

Query: 368 VITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFH 427
           V+TY+ L+S + + G+      L  +MK   ++PD   Y+ LI  LCK   V  A+++  
Sbjct: 301 VVTYSVLISSVCRDGKVEEGVGLLKDMKKKGLKPDGYCYDPLIAALCKEGRVDLAIEVLD 360

Query: 428 MLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQ--------------------- 466
           ++  +     I  +N ++  LCK  R D A  +F KL +                     
Sbjct: 361 VMISDGCVPDIVNYNTILACLCKQKRADEALSIFEKLGEVGCSPNASSYNSMFSALWSTG 420

Query: 467 --------------KGLVPTVVTYSIMIHGLCRKGKLEKANDFL--LYMEKNGCAPNVVT 510
                         KG+ P  +TY+ +I  LCR G +++A + L  + ME + C P+VV+
Sbjct: 421 HKVRALGMILEMLDKGVDPDGITYNSLISCLCRDGMVDEAIELLVDMEMESSECKPSVVS 480

Query: 511 FNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
           +N ++ G  + ++ S  +E+L  M   ++   P++TT++ +++
Sbjct: 481 YNIVLLGLCKVSRVSDAIEVLAAMV--DKGCRPNETTYTFLIE 521



 Score = 89.0 bits (219), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 64/248 (25%), Positives = 116/248 (46%), Gaps = 19/248 (7%)

Query: 78  FNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEAT 137
           ++ L  A+ K    D  I     ++S G +PD +  N ++ C       LC + R  EA 
Sbjct: 339 YDPLIAALCKEGRVDLAIEVLDVMISDGCVPDIVNYNTILAC-------LCKQKRADEAL 391

Query: 138 WLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYS 197
            +F+ +   G  P+  +Y ++ +    TG+   AL +  +M+    +   I+      Y+
Sbjct: 392 SIFEKLGEVGCSPNASSYNSMFSALWSTGHKVRALGMILEMLDKGVDPDGIT------YN 445

Query: 198 IIIDSLCKEGLVDKAKELF--LEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEML 255
            +I  LC++G+VD+A EL   +EM+     P+VV    ++ G C      +   +   M+
Sbjct: 446 SLISCLCRDGMVDEAIELLVDMEMESSECKPSVVSYNIVLLGLCKVSRVSDAIEVLAAMV 505

Query: 256 DLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRID 315
           D G RPN  T+  +I+ +  GG +N+A  L   ++    N D  + +S    Y    ++D
Sbjct: 506 DKGCRPNETTYTFLIEGIGFGGCLNDARDLATTLV----NMDAISEHSFERLYKTFCKLD 561

Query: 316 TAREIFLS 323
             R++ LS
Sbjct: 562 VYRQLNLS 569


>gi|302143409|emb|CBI21970.3| unnamed protein product [Vitis vinifera]
          Length = 375

 Score =  231 bits (590), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 131/373 (35%), Positives = 204/373 (54%), Gaps = 16/373 (4%)

Query: 66  MTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKER 125
           M  M+P P I  F+ L  ++ + +HY  V+S Y+++ S G+  +  TLNILIN F     
Sbjct: 1   MLRMRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNILINSF----- 55

Query: 126 GLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYEN 185
             C  NR+  A  +  +++  G +P   T+ TLI G C  G +  AL+L  KM    ++ 
Sbjct: 56  --CHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQ- 112

Query: 186 GLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWE 245
                 ++ +Y  +I+ LCK+  + +A  LF +M  +GI+P     ++LIHG C  G+W+
Sbjct: 113 -----PDVLTYGTLINGLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWK 167

Query: 246 EVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKI---NEANGLLELMIQRGLNPDRFTYN 302
           E   LF  M+     P+ LTFN ++D LCK G I   ++A GL E M Q+GL PD  TYN
Sbjct: 168 EAIRLFYAMIHRKIMPDQLTFNTLVDALCKEGMIQIMDKAMGLFEEMSQQGLIPDTVTYN 227

Query: 303 SLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISN 362
           +L+ G C VGR+  A  +F  M   G    +V+Y IL +  CK   + EAM L + I   
Sbjct: 228 TLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGT 287

Query: 363 GVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEA 422
            +   +  Y+ ++ G+ +AG+   A+ LF ++    + PD+ TY I+I+GLC+   + EA
Sbjct: 288 NLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEA 347

Query: 423 VKLFHMLEMNKFE 435
            KLF  ++ N  E
Sbjct: 348 SKLFGEMDENDIE 360



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 123/356 (34%), Positives = 200/356 (56%), Gaps = 9/356 (2%)

Query: 150 PDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLV 209
           P ++ +  L+    R  + S  L L+K+M S    +      N ++ +I+I+S C    +
Sbjct: 8   PSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPH------NTYTLNILINSFCHLNRL 61

Query: 210 DKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVM 269
             A  +  ++   G  P+    TTLI G C  G   E   LF +M   G +P++LT+  +
Sbjct: 62  GFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTL 121

Query: 270 IDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGC 329
           I+ LCK  ++ EA  L   M+ +G++P+ FTY+SL+ G C++G    A  +F +M  +  
Sbjct: 122 INGLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKI 181

Query: 330 KHTVVSYNILINGYCK---ILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGY 386
               +++N L++  CK   I  +++AM L+ ++   G+    +TYNTL+ GL   G+   
Sbjct: 182 MPDQLTFNTLVDALCKEGMIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRD 241

Query: 387 AQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLID 446
           A  LF EM +Y   PDL TY IL D LCKN+ + EA+ L  ++E    +  I I++ ++D
Sbjct: 242 AIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMD 301

Query: 447 GLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKN 502
           G+C+AG L+ A +LF KL  KGL P V TY+IMI+GLC++G L +A+     M++N
Sbjct: 302 GMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGEMDEN 357



 Score =  165 bits (417), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 109/361 (30%), Positives = 174/361 (48%), Gaps = 6/361 (1%)

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
           +I  +S ++ S+ +         L+ +M   GI         LI+ FC          + 
Sbjct: 9   SIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNILINSFCHLNRLGFAFSVL 68

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
            ++L LG +P+  TF  +I  LC  GKI EA  L + M   G  PD  TY +L++G C  
Sbjct: 69  GDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLINGLCKD 128

Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
            ++  A  +F  M +KG      +Y+ LI+G C + + +EA+ L+  +I   +    +T+
Sbjct: 129 RQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTF 188

Query: 372 NTLLSGLFQAGQAGYAQK---LFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHM 428
           NTL+  L + G      K   LF+EM    + PD  TYN LI GLC    +++A+ LFH 
Sbjct: 189 NTLVDALCKEGMIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHE 248

Query: 429 LEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGK 488
           + +      +  +  L D LCK  RL  A  L   +    L P +  YSI++ G+CR G+
Sbjct: 249 MVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGE 308

Query: 489 LEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTF 548
           LE A D    +   G  P+V T+  +++G  Q    ++  +L  +M E   N +   +TF
Sbjct: 309 LEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGEMDE---NDIESYSTF 365

Query: 549 S 549
           S
Sbjct: 366 S 366



 Score =  165 bits (417), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 100/345 (28%), Positives = 175/345 (50%), Gaps = 5/345 (1%)

Query: 226 PAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGL 285
           P++V  + L+       ++  V  L+ +M   G   N  T N++I+  C   ++  A  +
Sbjct: 8   PSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNILINSFCHLNRLGFAFSV 67

Query: 286 LELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCK 345
           L  +++ G  P   T+ +L+ G C+ G+I  A ++F  M  +G +  V++Y  LING CK
Sbjct: 68  LGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLINGLCK 127

Query: 346 ILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLST 405
              + EA+SL+  +++ G+     TY++L+ GL   G    A +LF  M    + PD  T
Sbjct: 128 DRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLT 187

Query: 406 YNILIDGLCKNNCVQ---EAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFH 462
           +N L+D LCK   +Q   +A+ LF  +           +N LI GLC  GRL +A  LFH
Sbjct: 188 FNTLVDALCKEGMIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFH 247

Query: 463 KLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNN 522
           ++   G +P +VTY I+   LC+  +L +A   L  +E     P++  ++ +M G  +  
Sbjct: 248 EMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAG 307

Query: 523 KTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAV 567
           +     +L  K++   + L PD  T++I+++ L +     E S +
Sbjct: 308 ELEAARDLFSKLS--SKGLHPDVRTYTIMINGLCQQGLLAEASKL 350



 Score =  148 bits (373), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 94/303 (31%), Positives = 159/303 (52%), Gaps = 5/303 (1%)

Query: 254 MLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGR 313
           ML + P P+++ F+ ++  + +    +    L + M   G+  + +T N L++ +C + R
Sbjct: 1   MLRMRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNILINSFCHLNR 60

Query: 314 IDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNT 373
           +  A  +   +   G + +  ++  LI G C    + EA+ L+ ++   G +  V+TY T
Sbjct: 61  LGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGT 120

Query: 374 LLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNK 433
           L++GL +  Q   A  LF +M    + P+  TY+ LI GLC     +EA++LF+ +   K
Sbjct: 121 LINGLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRK 180

Query: 434 FEFGIEIFNCLIDGLCKAGR---LDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLE 490
                  FN L+D LCK G    +D A  LF ++ Q+GL+P  VTY+ +IHGLC  G+L 
Sbjct: 181 IMPDQLTFNTLVDALCKEGMIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLR 240

Query: 491 KANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSI 550
            A      M   G  P++VT+  L     +N++ ++ + LL K+ E   NL PD   +SI
Sbjct: 241 DAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLL-KVIEGT-NLDPDIHIYSI 298

Query: 551 VVD 553
           V+D
Sbjct: 299 VMD 301


>gi|15232008|ref|NP_187518.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207466|sp|Q9SS81.1|PP221_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g09060
 gi|5923671|gb|AAD56322.1|AC009326_9 hypothetical protein [Arabidopsis thaliana]
 gi|332641194|gb|AEE74715.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 687

 Score =  231 bits (590), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 158/543 (29%), Positives = 271/543 (49%), Gaps = 26/543 (4%)

Query: 14  ETVSKVKLSSLFKSPRQIAAVSSPETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSP 73
           E    VK+ SLF +  + A V+      N  +  +CK       +AR F  +M      P
Sbjct: 126 EAKQWVKVESLF-AYFETAGVAPNLQTYNVLIKMSCKKK--EFEKARGFLDWMWKEGFKP 182

Query: 74  PISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRI 133
            + S++ +   +AK    D  +  + ++   G+ PD    NILI+       G   E   
Sbjct: 183 DVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILID-------GFLKEKDH 235

Query: 134 KEATWLFKNMIA-FGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
           K A  L+  ++    V P+V T+  +I+G  + G +   L++ ++M   + E       +
Sbjct: 236 KTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREK------D 289

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
           +++YS +I  LC  G VDKA+ +F E+  R  +  VV   T++ GFC  G  +E   L+ 
Sbjct: 290 LYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELW- 348

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
            +++     N++++N++I  L + GKI+EA  +  LM  +G   D+ TY   + G C+ G
Sbjct: 349 RIMEHKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNG 408

Query: 313 RIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYN 372
            ++ A  +   + S G    V +Y  +I+  CK   +EEA +L +++  +GV       N
Sbjct: 409 YVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCN 468

Query: 373 TLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMN 432
            L+ GL +  + G A     EM      P + +YNILI GLCK     EA      +  N
Sbjct: 469 ALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLEN 528

Query: 433 KFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKA 492
            ++  ++ ++ L+ GLC+  ++D A EL+H+  Q GL   V+ ++I+IHGLC  GKL+ A
Sbjct: 529 GWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDA 588

Query: 493 NDFLLYMEKNGCAPNVVTFNTLMHGFLQ---NNKTSKVVELLHKMAEPERNLVPDDTTFS 549
              +  ME   C  N+VT+NTLM GF +   +N+ + +   ++KM      L PD  +++
Sbjct: 589 MTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMG-----LQPDIISYN 643

Query: 550 IVV 552
            ++
Sbjct: 644 TIM 646



 Score =  198 bits (504), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 136/455 (29%), Positives = 221/455 (48%), Gaps = 38/455 (8%)

Query: 139 LFKNMIA-FGVRPDVITYGTLINGFC------------------------RTGNLSVALR 173
           +FK M   FG  P + +Y TL+N F                         +T N+ + + 
Sbjct: 100 VFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMS 159

Query: 174 LHKK-------MVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINP 226
             KK        +   ++ G   K ++FSYS +I+ L K G +D A ELF EM  RG+ P
Sbjct: 160 CKKKEFEKARGFLDWMWKEGF--KPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAP 217

Query: 227 AVVVCTTLIHGFCCAGNWEEVNGLFIEML-DLGPRPNLLTFNVMIDCLCKGGKINEANGL 285
            V     LI GF    + +    L+  +L D    PN+ T N+MI  L K G++++   +
Sbjct: 218 DVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKI 277

Query: 286 LELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCK 345
            E M Q     D +TY+SL+ G C  G +D A  +F  +  +     VV+YN ++ G+C+
Sbjct: 278 WERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCR 337

Query: 346 ILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLST 405
              ++E++ L+R I+ +     +++YN L+ GL + G+   A  ++  M       D +T
Sbjct: 338 CGKIKESLELWR-IMEHKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTT 396

Query: 406 YNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLP 465
           Y I I GLC N  V +A+ +   +E +     +  +  +ID LCK  RL+ A  L  ++ 
Sbjct: 397 YGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMS 456

Query: 466 QKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTS 525
           + G+       + +I GL R  +L +A+ FL  M KNGC P VV++N L+ G  +  K  
Sbjct: 457 KHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFG 516

Query: 526 KVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEK 560
           +    + +M   E    PD  T+SI++  L +D K
Sbjct: 517 EASAFVKEML--ENGWKPDLKTYSILLCGLCRDRK 549



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 124/429 (28%), Positives = 216/429 (50%), Gaps = 8/429 (1%)

Query: 199 IIDSLCKEGLVDKAKELFLEMKG-RGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDL 257
           +I +  K  + D+A ++F  M+   G  PA+    TL++ F  A  W +V  LF      
Sbjct: 84  VIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETA 143

Query: 258 GPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTA 317
           G  PNL T+NV+I   CK  +  +A G L+ M + G  PD F+Y+++++     G++D A
Sbjct: 144 GVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDA 203

Query: 318 REIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISN-GVRQTVITYNTLLS 376
            E+F  M  +G    V  YNILI+G+ K  + + AM L+ +++ +  V   V T+N ++S
Sbjct: 204 LELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMIS 263

Query: 377 GLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEF 436
           GL + G+     K+++ MK    E DL TY+ LI GLC    V +A  +F+ L+  K   
Sbjct: 264 GLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASI 323

Query: 437 GIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFL 496
            +  +N ++ G C+ G++  + EL+  +  K  V  +V+Y+I+I GL   GK+++A    
Sbjct: 324 DVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSV-NIVSYNILIKGLLENGKIDEATMIW 382

Query: 497 LYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLA 556
             M   G A +  T+   +HG   N   +K + ++ ++     +L  D   ++ ++D L 
Sbjct: 383 RLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHL--DVYAYASIIDCLC 440

Query: 557 KDEKYHECSAVSKSSYRACLYVTIFQPSSLGSMIGCTVRLMPQPEMSDTLGDDGDGNAGP 616
           K ++  E S + K   +   +          ++IG  +R     E S  L + G     P
Sbjct: 441 KKKRLEEASNLVKEMSK---HGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRP 497

Query: 617 IILSAVLLI 625
            ++S  +LI
Sbjct: 498 TVVSYNILI 506



 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 131/493 (26%), Positives = 232/493 (47%), Gaps = 36/493 (7%)

Query: 56  LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLV-SIGLLPDFLTLN 114
           L++A   F  M+    +P ++ +N+L     K + +   +  + +L+    + P+  T N
Sbjct: 200 LDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHN 259

Query: 115 ILI----------NCFGNKER------------------GLCVENRIKEATWLFKNMIAF 146
           I+I          +C    ER                  GLC    + +A  +F  +   
Sbjct: 260 IMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDER 319

Query: 147 GVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKE 206
               DV+TY T++ GFCR G +  +L L + M   +++N +    NI SY+I+I  L + 
Sbjct: 320 KASIDVVTYNTMLGGFCRCGKIKESLELWRIM---EHKNSV----NIVSYNILIKGLLEN 372

Query: 207 GLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTF 266
           G +D+A  ++  M  +G           IHG C  G   +  G+  E+   G   ++  +
Sbjct: 373 GKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAY 432

Query: 267 NVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHS 326
             +IDCLCK  ++ EA+ L++ M + G+  +    N+L+ G     R+  A      M  
Sbjct: 433 ASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGK 492

Query: 327 KGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGY 386
            GC+ TVVSYNILI G CK     EA +  ++++ NG +  + TY+ LL GL +  +   
Sbjct: 493 NGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDL 552

Query: 387 AQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLID 446
           A +L+ +     +E D+  +NILI GLC    + +A+ +   +E       +  +N L++
Sbjct: 553 ALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLME 612

Query: 447 GLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAP 506
           G  K G  + A  ++  + + GL P +++Y+ ++ GLC    +  A +F      +G  P
Sbjct: 613 GFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFP 672

Query: 507 NVVTFNTLMHGFL 519
            V T+N L+   +
Sbjct: 673 TVYTWNILVRAVV 685


>gi|115438490|ref|NP_001043552.1| Os01g0611900 [Oryza sativa Japonica Group]
 gi|21104680|dbj|BAB93270.1| fertility restorer homologue-like [Oryza sativa Japonica Group]
 gi|113533083|dbj|BAF05466.1| Os01g0611900 [Oryza sativa Japonica Group]
 gi|125571150|gb|EAZ12665.1| hypothetical protein OsJ_02580 [Oryza sativa Japonica Group]
 gi|215767882|dbj|BAH00111.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 800

 Score =  231 bits (589), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 142/456 (31%), Positives = 234/456 (51%), Gaps = 16/456 (3%)

Query: 99  RKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTL 158
           R++   GLLP     N++I       +GL  +   K+A  LFK M   G+ PD  TY  L
Sbjct: 341 RQMRDHGLLPSTNEFNMVI-------KGLLNDKLWKDAVSLFKEMADSGI-PDAFTYNIL 392

Query: 159 INGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLE 218
           I+  C+   +  AL L +KM     E G+  K  I +Y  ++   C  G +D+A +L+ E
Sbjct: 393 IHWLCQRRKIREALNLWEKM----NETGV--KPYIVTYHSLLLCYCVNGCMDEAVKLYTE 446

Query: 219 MKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGK 278
           M G+G  P VV  TTL+ G      +++   L  EM   G   N  T+N +I+ LC  G+
Sbjct: 447 MPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGR 506

Query: 279 INEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNI 338
           + E   +L+     G  P   TYNS+++G+   G + +A  ++  M +KG    +V+Y  
Sbjct: 507 VCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTS 566

Query: 339 LINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYN 398
            I+GYCK    + A+ +   +   G+R  +  YN+L+ G  Q G   +A ++   M    
Sbjct: 567 FIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIFGFCQEGNMSHALQVLVLMLKDG 626

Query: 399 VEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAW 458
           + P++S YN  I G      ++EA++L+  +     +     +  LIDG  K G +  A 
Sbjct: 627 LLPNISVYNSFITGYKNLKMMEEALRLYEKMIKEGIDLDTATYTTLIDGFSKDGNVTFAL 686

Query: 459 ELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGF 518
           +L+ ++  KG +P  +T++ + HGLCR G ++ A   L  M +    PNV+ +N L++G+
Sbjct: 687 KLYSEMVAKGNIPDHITFTALTHGLCRNGDIDDARKLLDEMNRLDIRPNVLMYNMLINGY 746

Query: 519 LQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDL 554
           L+N K  +   L  +M   ER ++PDDTT+ I+V +
Sbjct: 747 LRNGKLQEAFRLHDEML--ERKIMPDDTTYDILVGM 780



 Score =  161 bits (408), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 123/412 (29%), Positives = 199/412 (48%), Gaps = 9/412 (2%)

Query: 142 NMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIID 201
           +M A GV PD  +   L+    R+ + + AL L  +M       G     + + + +++ 
Sbjct: 132 SMEARGVTPDAKSRTDLLAVTARSASAADALALLAEM------RGKGRPLDAWMFDVVMR 185

Query: 202 SLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRP 261
           +  KEG+ D A  LF EM    I P   VC+  I   C   +      +  +M D G  P
Sbjct: 186 ACFKEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKMQDAGFVP 245

Query: 262 NLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIF 321
              TFN ++D L KGG++ EA  + + ++  G         +LM GYCL   +  A +IF
Sbjct: 246 WDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIF 305

Query: 322 LSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQA 381
                 G   T V+Y +LI G  +    E+A  L RQ+  +G+  +   +N ++ GL   
Sbjct: 306 EETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLND 365

Query: 382 GQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIF 441
                A  LF EM    + PD  TYNILI  LC+   ++EA+ L+  +     +  I  +
Sbjct: 366 KLWKDAVSLFKEMADSGI-PDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTY 424

Query: 442 NCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEK 501
           + L+   C  G +D A +L+ ++P KG  P VVTY+ ++ G   K   +KA   L  M++
Sbjct: 425 HSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQ 484

Query: 502 NGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
           NG + N  T+NTL++G     +  +V E+L +  E E   VP   T++ +++
Sbjct: 485 NGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRF-ETE-GFVPTAMTYNSIIN 534



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 119/436 (27%), Positives = 193/436 (44%), Gaps = 40/436 (9%)

Query: 130 ENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLIS 189
           E    +A  LF  M A  + PD       I   C+  + + AL + +KM     + G + 
Sbjct: 190 EGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKM----QDAGFVP 245

Query: 190 KTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNG 249
               F+++ ++D L K G +++A  +  E+   G   +VV+ TTL+HG+C      +   
Sbjct: 246 WD--FTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALD 303

Query: 250 LFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGL--------------- 294
           +F E L  G  P  +T+ V+I    + G   +A  L   M   GL               
Sbjct: 304 IFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLL 363

Query: 295 -------------------NPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVS 335
                               PD FTYN L+   C   +I  A  ++  M+  G K  +V+
Sbjct: 364 NDKLWKDAVSLFKEMADSGIPDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVT 423

Query: 336 YNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMK 395
           Y+ L+  YC    ++EA+ LY ++   G    V+TY TL+ G         A  L  EMK
Sbjct: 424 YHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMK 483

Query: 396 LYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLD 455
              V  +  TYN LI+GLC    V E  ++    E   F      +N +I+G  KAG + 
Sbjct: 484 QNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMG 543

Query: 456 NAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLM 515
           +A+ ++ ++  KG+ P +VTY+  I G C+    + A   L  +   G  P++  +N+L+
Sbjct: 544 SAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLI 603

Query: 516 HGFLQNNKTSKVVELL 531
            GF Q    S  +++L
Sbjct: 604 FGFCQEGNMSHALQVL 619


>gi|326490085|dbj|BAJ94116.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 641

 Score =  231 bits (589), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 133/456 (29%), Positives = 227/456 (49%), Gaps = 13/456 (2%)

Query: 79  NLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATW 138
           NL+  A+ +    D  +   RKL S G  PD ++ N ++       +GLC+  R  +   
Sbjct: 182 NLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVL-------KGLCMAKRWDDVEE 234

Query: 139 LFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSI 198
           L   M+  G  P+V T+ TLI   CR G      ++H+ + S   E+G     ++  Y+ 
Sbjct: 235 LMVEMVRVGCPPNVATFNTLIAYLCRNGLFE---QVHEAL-SQMPEHG--CTPDLRMYAT 288

Query: 199 IIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLG 258
           IID +CK+G  + A ++   M   G+ P VV   T++ G C A  WEE   L  EM    
Sbjct: 289 IIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQED 348

Query: 259 PRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAR 318
              + +TFN+++D  C+ G ++    LLE M++ G  PD  TY ++++G+C  G +D A 
Sbjct: 349 CPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAV 408

Query: 319 EIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGL 378
            +  +M + GCK   +SY I++ G C+     +A  L   +I  G     +T+NTL++ +
Sbjct: 409 MLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFM 468

Query: 379 FQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGI 438
            + G    A +L  +M +    PDL +Y+ +IDGL K    +EA++L +++         
Sbjct: 469 CKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNT 528

Query: 439 EIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLY 498
            I++ +   L + GR D   ++F  +    +      Y+ +I  LC++ + ++A DF  Y
Sbjct: 529 IIYSSMASALSREGRTDKIIQMFDSIQDATVRSDAALYNAVISSLCKRWETDRAIDFFAY 588

Query: 499 MEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKM 534
           M  NGC PN  T+  L+ G        +  +LL ++
Sbjct: 589 MVSNGCMPNESTYTILIRGLASEGLVREAQDLLSEL 624



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 126/440 (28%), Positives = 217/440 (49%), Gaps = 16/440 (3%)

Query: 125 RGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALR----LHKKMVS 180
           R LC    I +A  +   M   G          ++   CR G    A+R    LH K  +
Sbjct: 116 RSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRSAVRALQVLHAKGCT 175

Query: 181 GDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCC 240
            D  N           ++++ ++C++G VD+  EL  ++   G  P +V    ++ G C 
Sbjct: 176 LDSGN----------CNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLCM 225

Query: 241 AGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFT 300
           A  W++V  L +EM+ +G  PN+ TFN +I  LC+ G   + +  L  M + G  PD   
Sbjct: 226 AKRWDDVEELMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCTPDLRM 285

Query: 301 YNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQII 360
           Y +++DG C  G  + A +I   M S G K  VV YN ++ G C     EEA  L  ++ 
Sbjct: 286 YATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMF 345

Query: 361 SNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQ 420
                   +T+N L+    Q G      +L ++M  +   PD+ TY  +I+G CK   V 
Sbjct: 346 QEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVD 405

Query: 421 EAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMI 480
           EAV L   +     +     +  ++ GLC+A R  +A EL   + Q+G +P  VT++ +I
Sbjct: 406 EAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLI 465

Query: 481 HGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERN 540
           + +C+KG +E+A + L  M  NGC+P++++++T++ G  +  KT + +ELL+ M    + 
Sbjct: 466 NFMCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMI--NKG 523

Query: 541 LVPDDTTFSIVVDLLAKDEK 560
           + P+   +S +   L+++ +
Sbjct: 524 ITPNTIIYSSMASALSREGR 543



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 120/424 (28%), Positives = 204/424 (48%), Gaps = 13/424 (3%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
           P I S+N +   +   + +D V     ++V +G  P+  T N LI         LC    
Sbjct: 211 PDIVSYNAVLKGLCMAKRWDDVEELMVEMVRVGCPPNVATFNTLI-------AYLCRNGL 263

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
            ++       M   G  PD+  Y T+I+G C+ G+  VA  +  +M S     GL  K N
Sbjct: 264 FEQVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDILSRMPS----YGL--KPN 317

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
           +  Y+ ++  LC     ++A++L  EM         V    L+  FC  G  + V  L  
Sbjct: 318 VVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLE 377

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
           +ML+ G  P+++T+  +I+  CK G ++EA  LL+ M   G  P+  +Y  ++ G C   
Sbjct: 378 QMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAE 437

Query: 313 RIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYN 372
           R   A+E+   M  +GC    V++N LIN  CK   VE+A+ L +Q++ NG    +I+Y+
Sbjct: 438 RWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLVEQAIELLKQMLVNGCSPDLISYS 497

Query: 373 TLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMN 432
           T++ GL +AG+   A +L + M    + P+   Y+ +   L +     + +++F  ++  
Sbjct: 498 TVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASALSREGRTDKIIQMFDSIQDA 557

Query: 433 KFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKA 492
                  ++N +I  LCK    D A + F  +   G +P   TY+I+I GL  +G + +A
Sbjct: 558 TVRSDAALYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTILIRGLASEGLVREA 617

Query: 493 NDFL 496
            D L
Sbjct: 618 QDLL 621



 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 129/474 (27%), Positives = 208/474 (43%), Gaps = 49/474 (10%)

Query: 125 RGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYE 184
           R LC   R  +A    + +   G    V+ Y  +I G+CR G ++ A RL   +      
Sbjct: 52  RSLCAAGRTADAA---RALDTAGDAAGVVAYNAMIAGYCRAGQVAAARRLAAAVPV---- 104

Query: 185 NGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNW 244
                  N ++Y  I+ SLC  GL+  A  +  EM  RG      +C  ++   C  G +
Sbjct: 105 -----PPNAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGF 159

Query: 245 EEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSL 304
                    +   G   +    N+++  +C+ G ++E   LL  +   G  PD  +YN++
Sbjct: 160 RSAVRALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAV 219

Query: 305 MDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCK---ILNVEEAMS------- 354
           + G C+  R D   E+ + M   GC   V ++N LI   C+      V EA+S       
Sbjct: 220 LKGLCMAKRWDDVEELMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGC 279

Query: 355 -----LYRQII--------------------SNGVRQTVITYNTLLSGLFQAGQAGYAQK 389
                +Y  II                    S G++  V+ YNT+L GL  A +   A+ 
Sbjct: 280 TPDLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAED 339

Query: 390 LFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLC 449
           L  EM   +   D  T+NIL+D  C+N  V   ++L   +  +     +  +  +I+G C
Sbjct: 340 LLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFC 399

Query: 450 KAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVV 509
           K G +D A  L   +   G  P  ++Y+I++ GLCR  +   A + + +M + GC PN V
Sbjct: 400 KEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPV 459

Query: 510 TFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
           TFNTL++   +     + +ELL +M        PD  ++S V+D L K  K  E
Sbjct: 460 TFNTLINFMCKKGLVEQAIELLKQML--VNGCSPDLISYSTVIDGLGKAGKTEE 511



 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 104/363 (28%), Positives = 177/363 (48%), Gaps = 10/363 (2%)

Query: 197 SIIIDSLCKEG-LVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEML 255
           S +I SLC  G   D A+ L       G    VV    +I G+C AG   +V        
Sbjct: 48  SALIRSLCAAGRTADAARALDTAGDAAG----VVAYNAMIAGYCRAG---QVAAARRLAA 100

Query: 256 DLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRID 315
            +   PN  T+  ++  LC  G I +A  +L+ M  RG        + +++  C  G   
Sbjct: 101 AVPVPPNAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFR 160

Query: 316 TAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLL 375
           +A      +H+KGC     + N++++  C+   V+E + L R++ S G    +++YN +L
Sbjct: 161 SAVRALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVL 220

Query: 376 SGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFE 435
            GL  A +    ++L  EM      P+++T+N LI  LC+N   ++  +    +  +   
Sbjct: 221 KGLCMAKRWDDVEELMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCT 280

Query: 436 FGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDF 495
             + ++  +IDG+CK G  + A ++  ++P  GL P VV Y+ ++ GLC   + E+A D 
Sbjct: 281 PDLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDL 340

Query: 496 LLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLL 555
           L  M +  C  + VTFN L+  F QN    +V+ELL +M   E   +PD  T++ V++  
Sbjct: 341 LAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQML--EHGCIPDVITYTTVINGF 398

Query: 556 AKD 558
            K+
Sbjct: 399 CKE 401



 Score =  125 bits (315), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 85/296 (28%), Positives = 142/296 (47%), Gaps = 14/296 (4%)

Query: 77  SFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEA 136
           +FN+L     +N   D VI    +++  G +PD +T   +IN       G C E  + EA
Sbjct: 355 TFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVIN-------GFCKEGLVDEA 407

Query: 137 TWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSY 196
             L KNM A G +P+ I+Y  ++ G CR      A  L   M+    + G +   N  ++
Sbjct: 408 VMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMI----QQGCLP--NPVTF 461

Query: 197 SIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLD 256
           + +I+ +CK+GLV++A EL  +M   G +P ++  +T+I G   AG  EE   L   M++
Sbjct: 462 NTLINFMCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMIN 521

Query: 257 LGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDT 316
            G  PN + ++ M   L + G+ ++   + + +    +  D   YN+++   C     D 
Sbjct: 522 KGITPNTIIYSSMASALSREGRTDKIIQMFDSIQDATVRSDAALYNAVISSLCKRWETDR 581

Query: 317 AREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIIS-NGVRQTVITY 371
           A + F  M S GC     +Y ILI G      V EA  L  ++ S   VR+ ++ +
Sbjct: 582 AIDFFAYMVSNGCMPNESTYTILIRGLASEGLVREAQDLLSELCSRRAVRKHLVRH 637



 Score = 82.8 bits (203), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 63/246 (25%), Positives = 108/246 (43%), Gaps = 19/246 (7%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CK G+++  EA      M+     P   S+ ++   + +   +         ++  G LP
Sbjct: 399 CKEGLVD--EAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLP 456

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           + +T N LIN        +C +  +++A  L K M+  G  PD+I+Y T+I+G  + G  
Sbjct: 457 NPVTFNTLIN-------FMCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKT 509

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
             AL L   M++     G+   T I  YS +  +L +EG  DK  ++F  ++   +    
Sbjct: 510 EEALELLNVMIN----KGITPNTII--YSSMASALSREGRTDKIIQMFDSIQDATVRSDA 563

Query: 229 VVCTTLIHGFCCAGNWEEVNGL--FIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLL 286
            +   +I   C    WE    +  F  M+  G  PN  T+ ++I  L   G + EA  LL
Sbjct: 564 ALYNAVISSLC--KRWETDRAIDFFAYMVSNGCMPNESTYTILIRGLASEGLVREAQDLL 621

Query: 287 ELMIQR 292
             +  R
Sbjct: 622 SELCSR 627


>gi|255557743|ref|XP_002519901.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223540947|gb|EEF42505.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 777

 Score =  231 bits (589), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 158/541 (29%), Positives = 248/541 (45%), Gaps = 53/541 (9%)

Query: 51  SGIINLNEARY---FFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLL 107
           S ++  NE +     F  M H   +P +  F+ +  A       D  I  +RK+  +G+ 
Sbjct: 170 SSLVKANEVKMSYQVFDIMCHCGVTPDVYLFSTMVNAFCTGGRVDDAIELFRKMEKVGVA 229

Query: 108 PDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGN 167
           P+ +T N +I+       GLC   R+ EA    + M    V+P ++TYG LING  +   
Sbjct: 230 PNVVTYNNIIH-------GLCKNGRLDEAFQFKEKMEKERVKPSLVTYGVLINGLVKLER 282

Query: 168 LSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPA 227
              A  + K+M    Y        N   Y+ +ID  C+ G +  A ++  +M   GI+P 
Sbjct: 283 FDEANCILKEMSDRGY------APNNVVYNTLIDGYCRIGNISTALQIRDDMISNGISPN 336

Query: 228 VVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGP---------------------------- 259
            V C +LI G+C +   E    L  EML  G                             
Sbjct: 337 SVTCNSLIQGYCKSNQMEHAEHLLEEMLTGGGVINQGTFTSVIHRLCLKCRFDSALLFIM 396

Query: 260 -------RPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
                  +PN     +++  LC+ GK +EA  L   ++++G   +  T N+L+ G C  G
Sbjct: 397 EMLLRNFKPNDGLLTLLVSGLCQNGKQSEAIELWYRLLEKGFAANTVTSNALIHGLCEAG 456

Query: 313 RIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYN 372
             + A ++   M  +G     +SYN LI   CK   VEE   L  +++  G++  + TYN
Sbjct: 457 SKEEAAKLLKEMLERGLVLDSISYNTLILACCKEGKVEEGFKLKEEMVRRGIQPDMYTYN 516

Query: 373 TLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMN 432
            LL GL   G+   A  L+ E K     PD  TY I+IDG CK N V+E  KLF  +   
Sbjct: 517 MLLHGLCNMGKIEEAGGLWHECKKNGNFPDAYTYGIMIDGYCKANRVEEGEKLFQEMVTM 576

Query: 433 KFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKA 492
           K E    ++  LI   C+ G +  A+ L   +  +G+  T  TYS +IHGL   G ++ A
Sbjct: 577 KIEQNAVVYGTLIRAYCENGNMREAFRLRDDMRSRGIPQTSATYSSLIHGLSNIGLVDSA 636

Query: 493 NDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVV 552
           N  L  M K G +PNVV +  L+ G+ +  +  KV  +L +M+    N+ P+  T++I++
Sbjct: 637 NQLLDEMRKEGLSPNVVCYTALIGGYCKLGQMHKVDSILQEMS--INNVHPNKITYTIMI 694

Query: 553 D 553
           +
Sbjct: 695 N 695



 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 150/559 (26%), Positives = 266/559 (47%), Gaps = 41/559 (7%)

Query: 24  LFKSPRQIAAVSSPETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFG 83
           LF+   ++    +  T  N  +H  CK+G   L+EA  F   M   +  P + ++ +L  
Sbjct: 219 LFRKMEKVGVAPNVVT-YNNIIHGLCKNG--RLDEAFQFKEKMEKERVKPSLVTYGVLIN 275

Query: 84  AVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNM 143
            + K   +D      +++   G  P+ +  N LI+       G C    I  A  +  +M
Sbjct: 276 GLVKLERFDEANCILKEMSDRGYAPNNVVYNTLID-------GYCRIGNISTALQIRDDM 328

Query: 144 IAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGD--------------------Y 183
           I+ G+ P+ +T  +LI G+C++  +  A  L ++M++G                     +
Sbjct: 329 ISNGISPNSVTCNSLIQGYCKSNQMEHAEHLLEEMLTGGGVINQGTFTSVIHRLCLKCRF 388

Query: 184 ENGLIS---------KTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTL 234
           ++ L+          K N    ++++  LC+ G   +A EL+  +  +G     V    L
Sbjct: 389 DSALLFIMEMLLRNFKPNDGLLTLLVSGLCQNGKQSEAIELWYRLLEKGFAANTVTSNAL 448

Query: 235 IHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGL 294
           IHG C AG+ EE   L  EML+ G   + +++N +I   CK GK+ E   L E M++RG+
Sbjct: 449 IHGLCEAGSKEEAAKLLKEMLERGLVLDSISYNTLILACCKEGKVEEGFKLKEEMVRRGI 508

Query: 295 NPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMS 354
            PD +TYN L+ G C +G+I+ A  ++      G      +Y I+I+GYCK   VEE   
Sbjct: 509 QPDMYTYNMLLHGLCNMGKIEEAGGLWHECKKNGNFPDAYTYGIMIDGYCKANRVEEGEK 568

Query: 355 LYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLC 414
           L++++++  + Q  + Y TL+    + G    A +L D+M+   +    +TY+ LI GL 
Sbjct: 569 LFQEMVTMKIEQNAVVYGTLIRAYCENGNMREAFRLRDDMRSRGIPQTSATYSSLIHGLS 628

Query: 415 KNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVV 474
               V  A +L   +        +  +  LI G CK G++     +  ++    + P  +
Sbjct: 629 NIGLVDSANQLLDEMRKEGLSPNVVCYTALIGGYCKLGQMHKVDSILQEMSINNVHPNKI 688

Query: 475 TYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKM 534
           TY+IMI+G C+ G ++ A   L  M + G  P+ VT+N L +GF +  K  + +++   M
Sbjct: 689 TYTIMINGHCKLGNMKAAAKLLNEMAQKGIVPDAVTYNALTNGFCKEGKMEEALKVCDLM 748

Query: 535 AEPERNLVPDDTTFSIVVD 553
           +    +L  DD T++ ++D
Sbjct: 749 STGGISL--DDITYTTLID 765



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 115/402 (28%), Positives = 195/402 (48%), Gaps = 37/402 (9%)

Query: 197 SIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLD 256
           + ++ SL K   V  + ++F  M   G+ P V + +T+++ FC  G  ++   LF +M  
Sbjct: 166 NFLLSSLVKANEVKMSYQVFDIMCHCGVTPDVYLFSTMVNAFCTGGRVDDAIELFRKMEK 225

Query: 257 LGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDT 316
           +G  PN++T+N +I  LCK G+++EA    E M +  + P   TY  L++G   + R D 
Sbjct: 226 VGVAPNVVTYNNIIHGLCKNGRLDEAFQFKEKMEKERVKPSLVTYGVLINGLVKLERFDE 285

Query: 317 AREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLS 376
           A  I   M  +G     V YN LI+GYC+I N+  A+ +   +ISNG+    +T N+L+ 
Sbjct: 286 ANCILKEMSDRGYAPNNVVYNTLIDGYCRIGNISTALQIRDDMISNGISPNSVTCNSLIQ 345

Query: 377 GLFQAGQAGYAQKLFD-----------------------------------EMKLYNVEP 401
           G  ++ Q  +A+ L +                                   EM L N +P
Sbjct: 346 GYCKSNQMEHAEHLLEEMLTGGGVINQGTFTSVIHRLCLKCRFDSALLFIMEMLLRNFKP 405

Query: 402 DLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELF 461
           +     +L+ GLC+N    EA++L++ L    F       N LI GLC+AG  + A +L 
Sbjct: 406 NDGLLTLLVSGLCQNGKQSEAIELWYRLLEKGFAANTVTSNALIHGLCEAGSKEEAAKLL 465

Query: 462 HKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQN 521
            ++ ++GLV   ++Y+ +I   C++GK+E+       M + G  P++ T+N L+HG    
Sbjct: 466 KEMLERGLVLDSISYNTLILACCKEGKVEEGFKLKEEMVRRGIQPDMYTYNMLLHGLCNM 525

Query: 522 NKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
            K  +   L H+  +      PD  T+ I++D   K  +  E
Sbjct: 526 GKIEEAGGLWHECKKNGN--FPDAYTYGIMIDGYCKANRVEE 565



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 97/350 (27%), Positives = 170/350 (48%), Gaps = 2/350 (0%)

Query: 214 ELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCL 273
           ELF  +  +G+ P++  C  L+     A   +    +F  M   G  P++  F+ M++  
Sbjct: 148 ELFSLLANKGLFPSLKTCNFLLSSLVKANEVKMSYQVFDIMCHCGVTPDVYLFSTMVNAF 207

Query: 274 CKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTV 333
           C GG++++A  L   M + G+ P+  TYN+++ G C  GR+D A +    M  +  K ++
Sbjct: 208 CTGGRVDDAIELFRKMEKVGVAPNVVTYNNIIHGLCKNGRLDEAFQFKEKMEKERVKPSL 267

Query: 334 VSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDE 393
           V+Y +LING  K+   +EA  + +++   G     + YNTL+ G  + G    A ++ D+
Sbjct: 268 VTYGVLINGLVKLERFDEANCILKEMSDRGYAPNNVVYNTLIDGYCRIGNISTALQIRDD 327

Query: 394 MKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGR 453
           M    + P+  T N LI G CK+N ++ A  L   +           F  +I  LC   R
Sbjct: 328 MISNGISPNSVTCNSLIQGYCKSNQMEHAEHLLEEMLTGGGVINQGTFTSVIHRLCLKCR 387

Query: 454 LDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNT 513
            D+A     ++  +   P     ++++ GLC+ GK  +A +    + + G A N VT N 
Sbjct: 388 FDSALLFIMEMLLRNFKPNDGLLTLLVSGLCQNGKQSEAIELWYRLLEKGFAANTVTSNA 447

Query: 514 LMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
           L+HG  +     +  +LL +M   ER LV D  +++ ++    K+ K  E
Sbjct: 448 LIHGLCEAGSKEEAAKLLKEML--ERGLVLDSISYNTLILACCKEGKVEE 495



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 90/278 (32%), Positives = 141/278 (50%), Gaps = 13/278 (4%)

Query: 72  SPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVEN 131
            P + ++N+L   +      +     + +    G  PD  T  I+I+       G C  N
Sbjct: 509 QPDMYTYNMLLHGLCNMGKIEEAGGLWHECKKNGNFPDAYTYGIMID-------GYCKAN 561

Query: 132 RIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKT 191
           R++E   LF+ M+   +  + + YGTLI  +C  GN+  A RL   M S       I +T
Sbjct: 562 RVEEGEKLFQEMVTMKIEQNAVVYGTLIRAYCENGNMREAFRLRDDMRSRG-----IPQT 616

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
           +  +YS +I  L   GLVD A +L  EM+  G++P VV  T LI G+C  G   +V+ + 
Sbjct: 617 SA-TYSSLIHGLSNIGLVDSANQLLDEMRKEGLSPNVVCYTALIGGYCKLGQMHKVDSIL 675

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
            EM      PN +T+ +MI+  CK G +  A  LL  M Q+G+ PD  TYN+L +G+C  
Sbjct: 676 QEMSINNVHPNKITYTIMINGHCKLGNMKAAAKLLNEMAQKGIVPDAVTYNALTNGFCKE 735

Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNV 349
           G+++ A ++   M + G     ++Y  LI+G+ K L V
Sbjct: 736 GKMEEALKVCDLMSTGGISLDDITYTTLIDGWHKPLTV 773


>gi|302822936|ref|XP_002993123.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
 gi|300139014|gb|EFJ05763.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
          Length = 569

 Score =  231 bits (589), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 138/498 (27%), Positives = 241/498 (48%), Gaps = 26/498 (5%)

Query: 72  SPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVEN 131
           SP     N +   +   R     ++ + K+  +G +      N++          LC   
Sbjct: 43  SPDPVELNTILAELCDARDTTTAMALFDKMAELGAVNHTTYYNLI--------HPLCKAR 94

Query: 132 RIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKT 191
            + EA  L  +M + G+ P  + +  +I G CR G L  AL ++++M             
Sbjct: 95  LLDEAMGLLLDMKSRGMNPGTLLHNVVIGGLCRAGRLRHALGVYRQMNDA-------HPP 147

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
           +  +Y+ ++  L K G +  A ++  EM      P     T ++   C     ++   L 
Sbjct: 148 DFLTYTKLVHGLSKAGRLRDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELV 207

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLL-ELMIQRGLNPDRFTYNSLMDGYCL 310
            EML  G   N +T++ ++D LCK  +++EA  LL   + +RG  PD  TY++++DG C 
Sbjct: 208 EEMLHRGMAANAITYSALVDGLCKCERLDEAVALLLGEVTRRGFTPDIVTYSTVIDGLCK 267

Query: 311 VGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVIT 370
            GR+  A +IF  M    C  T ++YN LI GYC+  +++EA+ L  +++ +     VIT
Sbjct: 268 AGRLRDAVDIFEEM---SCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDNCAPDVIT 324

Query: 371 YNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLE 430
           Y TL+S   + G+   A +LF +M    + PD+ T+  L+DGLC    +++A++L   + 
Sbjct: 325 YTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEIT 384

Query: 431 MNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLE 490
                  I  +NC++DG CK+ ++  A EL      +G VP  VTY+I++ G CR G+ +
Sbjct: 385 RRGCPPTIYTYNCVVDGYCKSNQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTD 444

Query: 491 KANDFLLYMEKNG--CAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTF 548
           +A  +L  +   G  C  +V  +  ++    ++ +T   V+   +M   +R  VP   TF
Sbjct: 445 QALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMI--QRGYVPAAATF 502

Query: 549 SIVVDLLAK---DEKYHE 563
           + VV  L K    ++ HE
Sbjct: 503 ATVVFALCKAHQPQQAHE 520



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 144/532 (27%), Positives = 250/532 (46%), Gaps = 47/532 (8%)

Query: 36  SPE-TQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAV 94
           SP+  +LN  L E C +   +   A   F  M  +      + +NL+   + K R  D  
Sbjct: 43  SPDPVELNTILAELCDAR--DTTTAMALFDKMAELGAVNHTTYYNLIH-PLCKARLLDEA 99

Query: 95  ISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVIT 154
           +     + S G+ P  L  N++I        GLC   R++ A  +++ M      PD +T
Sbjct: 100 MGLLLDMKSRGMNPGTLLHNVVIG-------GLCRAGRLRHALGVYRQM-NDAHPPDFLT 151

Query: 155 YGTLINGFCRTGNLSVALRLHKKMVSG----------------------DYENGLISK-- 190
           Y  L++G  + G L  A+++ ++MVS                       D    L+ +  
Sbjct: 152 YTKLVHGLSKAGRLRDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEML 211

Query: 191 -----TNIFSYSIIIDSLCKEGLVDKAKELFL-EMKGRGINPAVVVCTTLIHGFCCAGNW 244
                 N  +YS ++D LCK   +D+A  L L E+  RG  P +V  +T+I G C AG  
Sbjct: 212 HRGMAANAITYSALVDGLCKCERLDEAVALLLGEVTRRGFTPDIVTYSTVIDGLCKAGRL 271

Query: 245 EEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSL 304
            +   +F EM      P  +T+N +I   C+ G ++EA  LL  M+     PD  TY +L
Sbjct: 272 RDAVDIFEEM---SCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDNCAPDVITYTTL 328

Query: 305 MDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGV 364
           M  +C +GR+D A E+F  M +      VV++  L++G C    +E+A+ L  +I   G 
Sbjct: 329 MSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGC 388

Query: 365 RQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVK 424
             T+ TYN ++ G  ++ Q   A++L  + +     P+  TYNIL+ G C+     +A++
Sbjct: 389 PPTIYTYNCVVDGYCKSNQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQ 448

Query: 425 LFHML--EMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHG 482
               L  E       + ++  ++D LC+ GR D+A + + ++ Q+G VP   T++ ++  
Sbjct: 449 YLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFA 508

Query: 483 LCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKM 534
           LC+  + ++A++ L  M K G  P   T + ++  + +     K  EL  ++
Sbjct: 509 LCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAYCRAGMIQKADELASEL 560



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 108/351 (30%), Positives = 182/351 (51%), Gaps = 10/351 (2%)

Query: 215 LFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLC 274
           L  E++ RG++P  V   T++   C A +      LF +M +LG   N  T+  +I  LC
Sbjct: 33  LLDEIRDRGLSPDPVELNTILAELCDARDTTTAMALFDKMAELGA-VNHTTYYNLIHPLC 91

Query: 275 KGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVV 334
           K   ++EA GLL  M  RG+NP    +N ++ G C  GR+  A  ++  M+        +
Sbjct: 92  KARLLDEAMGLLLDMKSRGMNPGTLLHNVVIGGLCRAGRLRHALGVYRQMNDAH-PPDFL 150

Query: 335 SYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEM 394
           +Y  L++G  K   + +A+ + ++++S        T   ++  L    +   A++L +EM
Sbjct: 151 TYTKLVHGLSKAGRLRDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEM 210

Query: 395 KLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEI--FNCLIDGLCKAG 452
               +  +  TY+ L+DGLCK   + EAV L  + E+ +  F  +I  ++ +IDGLCKAG
Sbjct: 211 LHRGMAANAITYSALVDGLCKCERLDEAVALL-LGEVTRRGFTPDIVTYSTVIDGLCKAG 269

Query: 453 RLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFN 512
           RL +A ++F ++      PT +TY+ +I G CR G +++A   L  M  + CAP+V+T+ 
Sbjct: 270 RLRDAVDIFEEM---SCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDNCAPDVITYT 326

Query: 513 TLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
           TLM  F +  +     EL  +M      L PD  TF+ +VD L  + +  +
Sbjct: 327 TLMSAFCKMGRLDDAYELFQQMV--ANKLSPDVVTFTSLVDGLCGEGRMED 375



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 97/382 (25%), Positives = 165/382 (43%), Gaps = 54/382 (14%)

Query: 55  NLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYD-AVISFYRKLVSIGLLPDFLTL 113
            +++AR     M H   +    +++ L   + K    D AV     ++   G  PD +T 
Sbjct: 199 RVDDARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVALLLGEVTRRGFTPDIVTY 258

Query: 114 NILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALR 173
           + +I+       GLC   R+++A  +F+ M      P  ITY +LI G+CR G++  A+R
Sbjct: 259 STVID-------GLCKAGRLRDAVDIFEEM---SCAPTAITYNSLIGGYCRAGDMDEAIR 308

Query: 174 LHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTT 233
           L  KMV  +         ++ +Y+ ++ + CK G +D A ELF +M    ++P VV  T+
Sbjct: 309 LLGKMVDDN------CAPDVITYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTS 362

Query: 234 LIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRG 293
           L+ G C  G  E+   L  E+   G  P + T+N ++D  CK  ++ +A  L+     RG
Sbjct: 363 LVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKSNQVRKAEELVADFRSRG 422

Query: 294 LNPDRFTYNSL-------------------------------------MDGYCLVGRIDT 316
             P+  TYN L                                     +D  C  GR D 
Sbjct: 423 FVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDD 482

Query: 317 AREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLS 376
           A + +  M  +G      ++  ++   CK    ++A  L  ++I  G      T + ++S
Sbjct: 483 AVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVS 542

Query: 377 GLFQAGQAGYAQKLFDEMKLYN 398
              +AG    A +L  E++LY 
Sbjct: 543 AYCRAGMIQKADELASELRLYT 564



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 94/340 (27%), Positives = 156/340 (45%), Gaps = 42/340 (12%)

Query: 254 MLDLGPRPNLLTFNVMIDCLCKGGKINEANGLL-ELMIQRGLNPD--------------- 297
           MLD G   +  TF V++  L    K+     LL + +  RGL+PD               
Sbjct: 1   MLDAGYPSDSSTFAVVLRGLHASAKLRHLGPLLLDEIRDRGLSPDPVELNTILAELCDAR 60

Query: 298 -------------------RFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNI 338
                                TY +L+   C    +D A  + L M S+G     + +N+
Sbjct: 61  DTTTAMALFDKMAELGAVNHTTYYNLIHPLCKARLLDEAMGLLLDMKSRGMNPGTLLHNV 120

Query: 339 LINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYN 398
           +I G C+   +  A+ +YRQ +++      +TY  L+ GL +AG+   A ++  EM    
Sbjct: 121 VIGGLCRAGRLRHALGVYRQ-MNDAHPPDFLTYTKLVHGLSKAGRLRDAVQVLQEMVSAR 179

Query: 399 VEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAW 458
             PD +T  +++  LC  + V +A +L   +           ++ L+DGLCK  RLD A 
Sbjct: 180 HVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAV 239

Query: 459 E-LFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHG 517
             L  ++ ++G  P +VTYS +I GLC+ G+L  A D     E+  CAP  +T+N+L+ G
Sbjct: 240 ALLLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIF---EEMSCAPTAITYNSLIGG 296

Query: 518 FLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAK 557
           + +     + + LL KM +   N  PD  T++ ++    K
Sbjct: 297 YCRAGDMDEAIRLLGKMVDD--NCAPDVITYTTLMSAFCK 334



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 60/213 (28%), Positives = 98/213 (46%), Gaps = 4/213 (1%)

Query: 355 LYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLC 414
           L  +I   G+    +  NT+L+ L  A     A  LFD+M         + YN LI  LC
Sbjct: 33  LLDEIRDRGLSPDPVELNTILAELCDARDTTTAMALFDKMAELGAVNHTTYYN-LIHPLC 91

Query: 415 KNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVV 474
           K   + EA+ L   ++      G  + N +I GLC+AGRL +A  ++ ++      P  +
Sbjct: 92  KARLLDEAMGLLLDMKSRGMNPGTLLHNVVIGGLCRAGRLRHALGVYRQM-NDAHPPDFL 150

Query: 475 TYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKM 534
           TY+ ++HGL + G+L  A   L  M      P+  T   ++      ++     EL+ +M
Sbjct: 151 TYTKLVHGLSKAGRLRDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEM 210

Query: 535 AEPERNLVPDDTTFSIVVDLLAKDEKYHECSAV 567
               R +  +  T+S +VD L K E+  E  A+
Sbjct: 211 LH--RGMAANAITYSALVDGLCKCERLDEAVAL 241


>gi|357466003|ref|XP_003603286.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355492334|gb|AES73537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1246

 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 137/461 (29%), Positives = 246/461 (53%), Gaps = 15/461 (3%)

Query: 92  DAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPD 151
           +  +  Y++++S G+ P   T + L+   G +     + N ++E       M + G+RP+
Sbjct: 217 NEALKVYKRMISEGMKPSMKTYSALMVALGRRGDTRKIMNLLEE-------MKSIGLRPN 269

Query: 152 VITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDK 211
           + TY   I    R   +  A  + K+M   D E       ++ +Y+++ID+LC  G +DK
Sbjct: 270 IYTYTICIRALGRARRIDDAWGIFKEM---DDEG---CGPDVITYTVLIDALCAAGKLDK 323

Query: 212 AKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMID 271
           AKEL+++M+    +P  V   TL+  F   G+ E V   + EM   G  P+++T+ ++I+
Sbjct: 324 AKELYVKMRASSHSPDRVTYITLMDKFGKVGDLETVKRFWNEMEVDGYAPDVVTYTILIE 383

Query: 272 CLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKH 331
            LCK G ++ A  +L++M  +G+ P+  TYN+++ G     R+D A E+  +M S G K 
Sbjct: 384 ALCKSGDVDRAFDMLDVMTTKGIFPNLHTYNTMICGLLKARRLDEALELLENMESLGVKP 443

Query: 332 TVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLF 391
           T  SY + I+ Y K  +  +A+  +  +   G+  ++   N  L  L + G+   A+ +F
Sbjct: 444 TAFSYVLFIDYYGKSGDPAKAIDTFETMKKRGIMPSIAACNASLYTLAETGRISEAEDIF 503

Query: 392 DEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKA 451
           +++    + PD  TYN+L+    K   + +A +L   +     E  + I N LI+ L KA
Sbjct: 504 NDLHKCGLSPDSVTYNMLMKCYSKAGQIDKATQLLSEMISKGCEPDVMIINSLINTLYKA 563

Query: 452 GRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTF 511
           GR+D AW++F +L    L PTVVTY+I++ GL ++GK+ KA +    M ++GC PN +TF
Sbjct: 564 GRVDAAWKMFGRLKNLKLAPTVVTYNILLTGLGKEGKILKALELFGSMTESGCPPNTITF 623

Query: 512 NTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVV 552
           N+L+    +N+     +++  +M     N  PD  T++ ++
Sbjct: 624 NSLLDCLSKNDAVDLALKMFCRMT--MMNCNPDVLTYNTII 662



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 132/459 (28%), Positives = 225/459 (49%), Gaps = 14/459 (3%)

Query: 58   EARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILI 117
            +A   FG MT     P   +FN L   ++KN   D  +  + ++  +   PD LT N +I
Sbjct: 603  KALELFGSMTESGCPPNTITFNSLLDCLSKNDAVDLALKMFCRMTMMNCNPDVLTYNTII 662

Query: 118  NCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKK 177
                    GL  E RI  A W F  M  F + PD +T  TLI G  R G +  A++    
Sbjct: 663  -------YGLIREGRIDYAFWFFHQMKKF-LSPDYVTLCTLIPGVVRHGRVEDAIK---- 710

Query: 178  MVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHG 237
             V  ++ +    +TN   +  +++ +  E  +++A      +    +     V   LI  
Sbjct: 711  -VVMEFVHQACLQTNSQFWGELMECILTEAEIEEAISFAEILVCNSVCQDDHVMLPLIKV 769

Query: 238  FCCAGNWEEVNGLFIEML-DLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNP 296
             C      +   +F +   +LG  P L ++N ++D L       +A  L E M   G +P
Sbjct: 770  LCKRKKALDAQNVFDKFTKNLGIHPTLESYNCLMDGLLGSNFTEKALELFEDMKSAGTHP 829

Query: 297  DRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLY 356
            + FTYN L+D +    RI+   +++  M S+GC+   +++NI+I+   K  N+ +A+ LY
Sbjct: 830  NNFTYNLLLDAHGKSKRINKLYDLYSEMRSRGCEPNAITHNIIISALVKSNNLNKALDLY 889

Query: 357  RQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKN 416
             +++S     T  TY  L+ GL +AG++  A K+F+EM  Y   P+   YNILI+G  K+
Sbjct: 890  YELMSGDFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILINGFGKS 949

Query: 417  NCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTY 476
              +  A +LF  +        ++ +  L++ LC  GR+D A + F +L   GL P  V+Y
Sbjct: 950  GEIDFACELFKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQYFEELKLTGLDPDTVSY 1009

Query: 477  SIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLM 515
            + +I+GL +  +L++A      M+  G +P++ T+N L+
Sbjct: 1010 NFIINGLGKSRRLDEALSLFSEMKNRGISPDLYTYNALI 1048



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 135/494 (27%), Positives = 228/494 (46%), Gaps = 31/494 (6%)

Query: 48   NCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLL 107
            +C S    ++ A   F  MT M  +P + ++N +   + +    D    F+ ++    L 
Sbjct: 628  DCLSKNDAVDLALKMFCRMTMMNCNPDVLTYNTIIYGLIREGRIDYAFWFFHQMKKF-LS 686

Query: 108  PDFLTLNILINCFGNKERGLCVENRIK--------------EATW--LFKNMIAFGVRPD 151
            PD++TL  LI       R   VE+ IK                 W  L + ++      +
Sbjct: 687  PDYVTLCTLIPGVVRHGR---VEDAIKVVMEFVHQACLQTNSQFWGELMECILTEAEIEE 743

Query: 152  VITYGTLI--NGFCRTGNLSVAL---------RLHKKMVSGDYENGLISKTNIFSYSIII 200
             I++  ++  N  C+  ++ + L          L  + V   +   L     + SY+ ++
Sbjct: 744  AISFAEILVCNSVCQDDHVMLPLIKVLCKRKKALDAQNVFDKFTKNLGIHPTLESYNCLM 803

Query: 201  DSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPR 260
            D L      +KA ELF +MK  G +P       L+     +    ++  L+ EM   G  
Sbjct: 804  DGLLGSNFTEKALELFEDMKSAGTHPNNFTYNLLLDAHGKSKRINKLYDLYSEMRSRGCE 863

Query: 261  PNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREI 320
            PN +T N++I  L K   +N+A  L   ++    +P   TY  L+DG    GR + A +I
Sbjct: 864  PNAITHNIIISALVKSNNLNKALDLYYELMSGDFSPTPCTYGPLIDGLLKAGRSEQAMKI 923

Query: 321  FLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQ 380
            F  M   GC    V YNILING+ K   ++ A  L+++++  G+R  + +Y  L+  L  
Sbjct: 924  FEEMLDYGCGPNSVIYNILINGFGKSGEIDFACELFKKMVKEGIRPDLKSYTILVECLCI 983

Query: 381  AGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEI 440
             G+   A + F+E+KL  ++PD  +YN +I+GL K+  + EA+ LF  ++       +  
Sbjct: 984  TGRIDEAVQYFEELKLTGLDPDTVSYNFIINGLGKSRRLDEALSLFSEMKNRGISPDLYT 1043

Query: 441  FNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYME 500
            +N LI  L  AG++D A +++ +L   GL P+V TY+ +I G    G  ++A      M 
Sbjct: 1044 YNALILHLGIAGKVDVAVKMYEELQLVGLEPSVFTYNALIRGHSLSGNKDQAFSVFKKMM 1103

Query: 501  KNGCAPNVVTFNTL 514
              GC+PN  TF  L
Sbjct: 1104 VVGCSPNTETFAQL 1117



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 136/523 (26%), Positives = 235/523 (44%), Gaps = 59/523 (11%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
           P I++ N     +A+          +  L   GL PD +T N+L+ C+           +
Sbjct: 478 PSIAACNASLYTLAETGRISEAEDIFNDLHKCGLSPDSVTYNMLMKCYSKA-------GQ 530

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
           I +AT L   MI+ G  PDV+   +LIN   + G +  A ++      G  +N  ++ T 
Sbjct: 531 IDKATQLLSEMISKGCEPDVMIINSLINTLYKAGRVDAAWKMF-----GRLKNLKLAPT- 584

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVN---G 249
           + +Y+I++  L KEG + KA ELF  M   G  P  +   +L+    C    + V+    
Sbjct: 585 VVTYNILLTGLGKEGKILKALELFGSMTESGCPPNTITFNSLLD---CLSKNDAVDLALK 641

Query: 250 LFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYC 309
           +F  M  +   P++LT+N +I  L + G+I+ A      M ++ L+PD  T  +L+ G  
Sbjct: 642 MFCRMTMMNCNPDVLTYNTIIYGLIREGRIDYAFWFFHQM-KKFLSPDYVTLCTLIPGVV 700

Query: 310 LVGRIDTAREIFLSMHSKGCKHT--------------------VVSYN------------ 337
             GR++ A ++ +    + C  T                     +S+             
Sbjct: 701 RHGRVEDAIKVVMEFVHQACLQTNSQFWGELMECILTEAEIEEAISFAEILVCNSVCQDD 760

Query: 338 ----ILINGYCKILNVEEAMSLYRQIISN-GVRQTVITYNTLLSGLFQAGQAGYAQKLFD 392
                LI   CK     +A +++ +   N G+  T+ +YN L+ GL  +     A +LF+
Sbjct: 761 HVMLPLIKVLCKRKKALDAQNVFDKFTKNLGIHPTLESYNCLMDGLLGSNFTEKALELFE 820

Query: 393 EMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAG 452
           +MK     P+  TYN+L+D   K+  + +   L+  +     E      N +I  L K+ 
Sbjct: 821 DMKSAGTHPNNFTYNLLLDAHGKSKRINKLYDLYSEMRSRGCEPNAITHNIIISALVKSN 880

Query: 453 RLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFN 512
            L+ A +L+++L      PT  TY  +I GL + G+ E+A      M   GC PN V +N
Sbjct: 881 NLNKALDLYYELMSGDFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYN 940

Query: 513 TLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLL 555
            L++GF ++ +     EL  KM   +  + PD  +++I+V+ L
Sbjct: 941 ILINGFGKSGEIDFACELFKKMV--KEGIRPDLKSYTILVECL 981



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 109/372 (29%), Positives = 189/372 (50%), Gaps = 13/372 (3%)

Query: 87   KNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAF 146
            + +  DA   F +   ++G+ P   + N L++       GL   N  ++A  LF++M + 
Sbjct: 773  RKKALDAQNVFDKFTKNLGIHPTLESYNCLMD-------GLLGSNFTEKALELFEDMKSA 825

Query: 147  GVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKE 206
            G  P+  TY  L++   ++  ++    L+ +M S   E       N  +++III +L K 
Sbjct: 826  GTHPNNFTYNLLLDAHGKSKRINKLYDLYSEMRSRGCE------PNAITHNIIISALVKS 879

Query: 207  GLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTF 266
              ++KA +L+ E+     +P       LI G   AG  E+   +F EMLD G  PN + +
Sbjct: 880  NNLNKALDLYYELMSGDFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIY 939

Query: 267  NVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHS 326
            N++I+   K G+I+ A  L + M++ G+ PD  +Y  L++  C+ GRID A + F  +  
Sbjct: 940  NILINGFGKSGEIDFACELFKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQYFEELKL 999

Query: 327  KGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGY 386
             G     VSYN +ING  K   ++EA+SL+ ++ + G+   + TYN L+  L  AG+   
Sbjct: 1000 TGLDPDTVSYNFIINGLGKSRRLDEALSLFSEMKNRGISPDLYTYNALILHLGIAGKVDV 1059

Query: 387  AQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLID 446
            A K+++E++L  +EP + TYN LI G   +    +A  +F  + +       E F  L +
Sbjct: 1060 AVKMYEELQLVGLEPSVFTYNALIRGHSLSGNKDQAFSVFKKMMVVGCSPNTETFAQLPN 1119

Query: 447  GLCKAGRLDNAW 458
               +AG + N +
Sbjct: 1120 KYPRAGLVHNPF 1131



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 112/398 (28%), Positives = 192/398 (48%), Gaps = 16/398 (4%)

Query: 92   DAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPD 151
            +  ISF   LV   +  D   +  LI     +++ L  +N   + T   KN+   G+ P 
Sbjct: 742  EEAISFAEILVCNSVCQDDHVMLPLIKVLCKRKKALDAQNVFDKFT---KNL---GIHPT 795

Query: 152  VITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDK 211
            + +Y  L++G   +     AL L + M S        +  N F+Y++++D+  K   ++K
Sbjct: 796  LESYNCLMDGLLGSNFTEKALELFEDMKSAG------THPNNFTYNLLLDAHGKSKRINK 849

Query: 212  AKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEML--DLGPRPNLLTFNVM 269
              +L+ EM+ RG  P  +    +I     + N  +   L+ E++  D  P P   T+  +
Sbjct: 850  LYDLYSEMRSRGCEPNAITHNIIISALVKSNNLNKALDLYYELMSGDFSPTP--CTYGPL 907

Query: 270  IDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGC 329
            ID L K G+  +A  + E M+  G  P+   YN L++G+   G ID A E+F  M  +G 
Sbjct: 908  IDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILINGFGKSGEIDFACELFKKMVKEGI 967

Query: 330  KHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQK 389
            +  + SY IL+   C    ++EA+  + ++   G+    ++YN +++GL ++ +   A  
Sbjct: 968  RPDLKSYTILVECLCITGRIDEAVQYFEELKLTGLDPDTVSYNFIINGLGKSRRLDEALS 1027

Query: 390  LFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLC 449
            LF EMK   + PDL TYN LI  L     V  AVK++  L++   E  +  +N LI G  
Sbjct: 1028 LFSEMKNRGISPDLYTYNALILHLGIAGKVDVAVKMYEELQLVGLEPSVFTYNALIRGHS 1087

Query: 450  KAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKG 487
             +G  D A+ +F K+   G  P   T++ + +   R G
Sbjct: 1088 LSGNKDQAFSVFKKMMVVGCSPNTETFAQLPNKYPRAG 1125



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 72/260 (27%), Positives = 122/260 (46%), Gaps = 13/260 (5%)

Query: 55   NLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLN 114
            NLN+A   +  +     SP   ++  L   + K    +  +  + +++  G  P+ +  N
Sbjct: 881  NLNKALDLYYELMSGDFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYN 940

Query: 115  ILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRL 174
            ILIN FG           I  A  LFK M+  G+RPD+ +Y  L+   C TG +  A++ 
Sbjct: 941  ILINGFGK-------SGEIDFACELFKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQY 993

Query: 175  HKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTL 234
             +++       GL   T   SY+ II+ L K   +D+A  LF EMK RGI+P +     L
Sbjct: 994  FEELKL----TGLDPDT--VSYNFIINGLGKSRRLDEALSLFSEMKNRGISPDLYTYNAL 1047

Query: 235  IHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGL 294
            I     AG  +    ++ E+  +G  P++ T+N +I      G  ++A  + + M+  G 
Sbjct: 1048 ILHLGIAGKVDVAVKMYEELQLVGLEPSVFTYNALIRGHSLSGNKDQAFSVFKKMMVVGC 1107

Query: 295  NPDRFTYNSLMDGYCLVGRI 314
            +P+  T+  L + Y   G +
Sbjct: 1108 SPNTETFAQLPNKYPRAGLV 1127



 Score = 92.4 bits (228), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 63/227 (27%), Positives = 109/227 (48%), Gaps = 13/227 (5%)

Query: 58   EARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILI 117
            +A   F  M      P    +N+L     K+   D     ++K+V  G+ PD  +  IL+
Sbjct: 919  QAMKIFEEMLDYGCGPNSVIYNILINGFGKSGEIDFACELFKKMVKEGIRPDLKSYTILV 978

Query: 118  NCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKK 177
             C       LC+  RI EA   F+ +   G+ PD ++Y  +ING  ++  L  AL L  +
Sbjct: 979  EC-------LCITGRIDEAVQYFEELKLTGLDPDTVSYNFIINGLGKSRRLDEALSLFSE 1031

Query: 178  MVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHG 237
            M     +N  IS  ++++Y+ +I  L   G VD A +++ E++  G+ P+V     LI G
Sbjct: 1032 M-----KNRGISP-DLYTYNALILHLGIAGKVDVAVKMYEELQLVGLEPSVFTYNALIRG 1085

Query: 238  FCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANG 284
               +GN ++   +F +M+ +G  PN  TF  + +   + G ++   G
Sbjct: 1086 HSLSGNKDQAFSVFKKMMVVGCSPNTETFAQLPNKYPRAGLVHNPFG 1132



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 57/261 (21%), Positives = 111/261 (42%), Gaps = 36/261 (13%)

Query: 331 HTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQ-- 388
           HT  + N ++    +   +E+ + ++  +    + + + TY T+   L   G  G A   
Sbjct: 129 HTTDACNYMLEILREQRRIEDMVFVFDLMQKKVIYRNLTTYMTIFKALSIKGGIGRAPFA 188

Query: 389 --------------------------------KLFDEMKLYNVEPDLSTYNILIDGLCKN 416
                                           K++  M    ++P + TY+ L+  L + 
Sbjct: 189 LRKMTEVGFILNAYSYNGLIHLLLPGFCNEALKVYKRMISEGMKPSMKTYSALMVALGRR 248

Query: 417 NCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTY 476
              ++ + L   ++       I  +   I  L +A R+D+AW +F ++  +G  P V+TY
Sbjct: 249 GDTRKIMNLLEEMKSIGLRPNIYTYTICIRALGRARRIDDAWGIFKEMDDEGCGPDVITY 308

Query: 477 SIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAE 536
           +++I  LC  GKL+KA +  + M  +  +P+ VT+ TLM  F +      V    ++M  
Sbjct: 309 TVLIDALCAAGKLDKAKELYVKMRASSHSPDRVTYITLMDKFGKVGDLETVKRFWNEMEV 368

Query: 537 PERNLVPDDTTFSIVVDLLAK 557
                 PD  T++I+++ L K
Sbjct: 369 D--GYAPDVVTYTILIEALCK 387


>gi|297848948|ref|XP_002892355.1| hypothetical protein ARALYDRAFT_311741 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297338197|gb|EFH68614.1| hypothetical protein ARALYDRAFT_311741 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 988

 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 146/541 (26%), Positives = 261/541 (48%), Gaps = 63/541 (11%)

Query: 71  PSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCF-GNKE----- 124
           PSP I  FN L  A   +  +       +K+V  G  P ++  NILI    G+K+     
Sbjct: 370 PSPKI--FNSLVHAYCTSGDHSYAYKLLKKMVKCGHTPGYVVYNILIGSICGDKDSLSCH 427

Query: 125 ----------------------------RGLCVENRIKEATWLFKNMIAFGVRPDVITYG 156
                                       R LC   + ++A  + + MI  G  PD  TY 
Sbjct: 428 LLELAEKAYSEMLATGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYS 487

Query: 157 TLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELF 216
            ++   C    + +A  L ++M  G    GL++  ++++Y+I++DS CK GL+++A++ F
Sbjct: 488 KVLGYLCNASKMELAFLLFEEMKRG----GLVA--DVYTYTIMVDSFCKAGLIEQARKWF 541

Query: 217 LEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKG 276
            EM+  G  P VV  T LIH +  A      N LF  ML  G  PN++T++ +ID  CK 
Sbjct: 542 NEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKA 601

Query: 277 GKINEANGLLELMI-----------------QRGLNPDRFTYNSLMDGYCLVGRIDTARE 319
           G++ +A  + E M                       P+   Y +L+DG+C + R++ AR+
Sbjct: 602 GQMEKACQIFERMCGSKDVPDVDMYFKQYDDDNSERPNVVIYGALLDGFCKLHRVEEARK 661

Query: 320 IFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLF 379
           +  +M  +GC+   + Y+ LI+G CK+  ++EA  +  ++  +G   T+ TY++L+   F
Sbjct: 662 LLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKAEMSEHGFPATLYTYSSLIDRYF 721

Query: 380 QAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIE 439
           +  +   A K+  +M   +  P++  Y  +IDGLCK     EA KL  M+E    +  + 
Sbjct: 722 KVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVV 781

Query: 440 IFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYM 499
            +  +IDG  + G+++   EL  ++  KG+ P  VTY ++I   C+ G L+ A++ L  M
Sbjct: 782 TYTAMIDGFGRIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEM 841

Query: 500 EKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDE 559
           ++     +   +  ++ GF  N +  + + LL ++ +   +  P  + + ++VD L K +
Sbjct: 842 KQTHWPTHAAGYRKVIEGF--NKEFIESLGLLDEIGQD--DTAPFLSLYRLLVDNLIKAQ 897

Query: 560 K 560
           +
Sbjct: 898 R 898



 Score =  195 bits (495), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 142/511 (27%), Positives = 225/511 (44%), Gaps = 65/511 (12%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
           P  S+++ + G +      +     + ++   GL+ D  T  I+++ F       C    
Sbjct: 481 PDTSTYSKVLGYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSF-------CKAGL 533

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
           I++A   F  M   G  P+V+TY  LI+ + +   +S A  L + M+S     G +   N
Sbjct: 534 IEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLS----EGCLP--N 587

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGR-----------------GINPAVVVCTTLI 235
           I +YS +ID  CK G ++KA ++F  M G                     P VV+   L+
Sbjct: 588 IVTYSALIDGHCKAGQMEKACQIFERMCGSKDVPDVDMYFKQYDDDNSERPNVVIYGALL 647

Query: 236 HGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLN 295
            GFC     EE   L   M   G  PN + ++ +ID LCK GK++EA  +   M + G  
Sbjct: 648 DGFCKLHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKAEMSEHGFP 707

Query: 296 PDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSL 355
              +TY+SL+D Y  V R D A ++   M    C   VV Y  +I+G CK+   +EA  L
Sbjct: 708 ATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKL 767

Query: 356 YRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCK 415
            + +   G +  V+TY  ++ G  + G+     +L + M    V P+  TY +LID  CK
Sbjct: 768 MQMMEEKGCQPNVVTYTAMIDGFGRIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCK 827

Query: 416 NNCVQEAVKLFHMLEMNKF--------------------------EFG-------IEIFN 442
           N  +  A  L   ++   +                          E G       + ++ 
Sbjct: 828 NGALDVAHNLLEEMKQTHWPTHAAGYRKVIEGFNKEFIESLGLLDEIGQDDTAPFLSLYR 887

Query: 443 CLIDGLCKAGRLDNAWELFHKLP--QKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYME 500
            L+D L KA RL+ A  L  ++      LV    TY+ +I  LC   K++KA      M 
Sbjct: 888 LLVDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVDKAFRLFSEMS 947

Query: 501 KNGCAPNVVTFNTLMHGFLQNNKTSKVVELL 531
           K G  P + TF +L+ G  +N+K S+ + LL
Sbjct: 948 KKGVIPEMQTFCSLIKGLFRNSKISEALLLL 978



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 158/646 (24%), Positives = 259/646 (40%), Gaps = 148/646 (22%)

Query: 41  LNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRK 100
           LN  + + C+SG  ++  A    G +   +  P  S++N L  A  K    D+    +R+
Sbjct: 203 LNVLVRKYCRSGSFSI--ALEELGRLKDFRFRPSRSTYNCLIQAFLKADCLDSASLVHRE 260

Query: 101 LVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLIN 160
           +    L  D  TL     C+      LC   + +EA  L   M      PD + Y  LI+
Sbjct: 261 MSLANLRMDGFTLR----CYA---YSLCKVGKWREALTL---METENFVPDTVFYTKLIS 310

Query: 161 GFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMK 220
           G C       A+    +M +           N+ +YS ++     +  + + K +   M 
Sbjct: 311 GLCEASLFEEAMDFLNRMRATS------CLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMM 364

Query: 221 GRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMI---------- 270
             G  P+  +  +L+H +C +G+      L  +M+  G  P  + +N++I          
Sbjct: 365 MEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHTPGYVVYNILIGSICGDKDSL 424

Query: 271 -------------------------------DCLCKGGKINEANGLLELMIQRGLNPDR- 298
                                           CLC  GK  +A  ++  MI +G  PD  
Sbjct: 425 SCHLLELAEKAYSEMLATGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTS 484

Query: 299 ----------------------------------FTYNSLMDGYCLVGRIDTAREIFLSM 324
                                             +TY  ++D +C  G I+ AR+ F  M
Sbjct: 485 TYSKVLGYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEM 544

Query: 325 HSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQA 384
              GC   VV+Y  LI+ Y K   V  A  L+  ++S G    ++TY+ L+ G  +AGQ 
Sbjct: 545 REVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQM 604

Query: 385 GYAQKLFDEM-------------KLYNVE----PDLSTYNILIDGLCKNNCVQEAVKLFH 427
             A ++F+ M             K Y+ +    P++  Y  L+DG CK + V+EA KL  
Sbjct: 605 EKACQIFERMCGSKDVPDVDMYFKQYDDDNSERPNVVIYGALLDGFCKLHRVEEARKLLD 664

Query: 428 MLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGL------------------ 469
            + M   E    +++ LIDGLCK G+LD A E+  ++ + G                   
Sbjct: 665 AMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKAEMSEHGFPATLYTYSSLIDRYFKVK 724

Query: 470 -----------------VPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFN 512
                             P VV Y+ MI GLC+ GK ++A   +  ME+ GC PNVVT+ 
Sbjct: 725 RQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYT 784

Query: 513 TLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKD 558
            ++ GF +  K    +ELL +M    + + P+  T+ +++D   K+
Sbjct: 785 AMIDGFGRIGKIETCLELLERMG--SKGVAPNYVTYRVLIDHCCKN 828



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 131/475 (27%), Positives = 231/475 (48%), Gaps = 43/475 (9%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CK+G+I   +AR +F  M  +  +P + ++  L  A  K +        +  ++S G LP
Sbjct: 529 CKAGLIE--QARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLP 586

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAF-----------------GVRPD 151
           + +T + LI+       G C   ++++A  +F+ M                      RP+
Sbjct: 587 NIVTYSALID-------GHCKAGQMEKACQIFERMCGSKDVPDVDMYFKQYDDDNSERPN 639

Query: 152 VITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDK 211
           V+ YG L++GFC+   +  A +L   M     E       N   Y  +ID LCK G +D+
Sbjct: 640 VVIYGALLDGFCKLHRVEEARKLLDAMSMEGCE------PNQIVYDALIDGLCKVGKLDE 693

Query: 212 AKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMID 271
           A+E+  EM   G    +   ++LI  +      +  + +  +ML+    PN++ +  MID
Sbjct: 694 AQEVKAEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMID 753

Query: 272 CLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKH 331
            LCK GK +EA  L+++M ++G  P+  TY +++DG+  +G+I+T  E+   M SKG   
Sbjct: 754 GLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGRIGKIETCLELLERMGSKGVAP 813

Query: 332 TVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLF 391
             V+Y +LI+  CK   ++ A +L  ++           Y  ++ G  +         L 
Sbjct: 814 NYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHAAGYRKVIEGFNKEFIESLG--LL 871

Query: 392 DEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGI----EIFNCLIDG 447
           DE+   +  P LS Y +L+D L K   ++ A++L    E+  F   +      +N LI+ 
Sbjct: 872 DEIGQDDTAPFLSLYRLLVDNLIKAQRLEMALRLLE--EVATFSATLVDYSSTYNSLIES 929

Query: 448 LCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKA---NDFLLYM 499
           LC A ++D A+ LF ++ +KG++P + T+  +I GL R  K+ +A    DF+ +M
Sbjct: 930 LCLANKVDKAFRLFSEMSKKGVIPEMQTFCSLIKGLFRNSKISEALLLLDFISHM 984



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 93/434 (21%), Positives = 161/434 (37%), Gaps = 81/434 (18%)

Query: 196 YSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEML 255
           Y+ ++D + ++      +EL  +++             L+  +C +G++         + 
Sbjct: 168 YNALVDLIVRDDDEKVPEELLQQIRDDDKEVFGEFLNVLVRKYCRSGSFSIALEELGRLK 227

Query: 256 DLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRID 315
           D   RP+  T+N +I    K   ++ A+ +   M    L  D FT        C VG+  
Sbjct: 228 DFRFRPSRSTYNCLIQAFLKADCLDSASLVHREMSLANLRMDGFTLRCYAYSLCKVGKW- 286

Query: 316 TAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLL 375
             RE    M ++      V Y  LI+G C+    EEAM    ++ +      V+TY+TLL
Sbjct: 287 --REALTLMETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLL 344

Query: 376 SGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFE 435
            G     Q G  +++ + M +    P    +N L+   C +     A KL   +      
Sbjct: 345 CGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHT 404

Query: 436 FGIEIFNCLIDG-----------------------------------------LCKAGRL 454
            G  ++N LI                                           LC AG+ 
Sbjct: 405 PGYVVYNILIGSICGDKDSLSCHLLELAEKAYSEMLATGVVLNKINVSSFTRCLCSAGKY 464

Query: 455 DNAWELFHKLPQKGLVP-----------------------------------TVVTYSIM 479
           + A+ +  ++  +G +P                                    V TY+IM
Sbjct: 465 EKAFSVIREMIGQGFIPDTSTYSKVLGYLCNASKMELAFLLFEEMKRGGLVADVYTYTIM 524

Query: 480 IHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPER 539
           +   C+ G +E+A  +   M + GC PNVVT+  L+H +L+  K S   EL   M     
Sbjct: 525 VDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETML--SE 582

Query: 540 NLVPDDTTFSIVVD 553
             +P+  T+S ++D
Sbjct: 583 GCLPNIVTYSALID 596



 Score = 66.2 bits (160), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 53/210 (25%), Positives = 85/210 (40%), Gaps = 35/210 (16%)

Query: 357 RQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKN 416
           RQI   G + T   YN L+  + +       ++L  +++  + E      N+L+   C++
Sbjct: 157 RQI---GYKHTSPVYNALVDLIVRDDDEKVPEELLQQIRDDDKEVFGEFLNVLVRKYCRS 213

Query: 417 NCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNA------------------- 457
                A++    L+  +F      +NCLI    KA  LD+A                   
Sbjct: 214 GSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADCLDSASLVHREMSLANLRMDGFTL 273

Query: 458 ------------W-ELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGC 504
                       W E    +  +  VP  V Y+ +I GLC     E+A DFL  M    C
Sbjct: 274 RCYAYSLCKVGKWREALTLMETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSC 333

Query: 505 APNVVTFNTLMHGFLQNNKTSKVVELLHKM 534
            PNVVT++TL+ G L   +  +   +L+ M
Sbjct: 334 LPNVVTYSTLLCGCLNKKQLGRCKRVLNMM 363


>gi|302773712|ref|XP_002970273.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
 gi|300161789|gb|EFJ28403.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
          Length = 831

 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 165/573 (28%), Positives = 267/573 (46%), Gaps = 62/573 (10%)

Query: 55  NLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLN 114
           +L +A   F  M      P   ++ +L  +    R+ D  + F+ ++V  G  P      
Sbjct: 144 DLKQAGQVFEKMVAQGVVPNGFTYAVLVQSSCYERNSDEAVRFFGEMVDKGFKPSSTLYQ 203

Query: 115 ILINC-------------FGNK-ERGLCVENRIK--------------EATWLFKNMIAF 146
            +  C             FG   E+ + VE  +K              EA+ LF+ M+  
Sbjct: 204 KVTECLKATGKEGEFSRVFGRDLEKRVAVEMMLKKALLVNFVIQDKAIEASKLFRAMVKS 263

Query: 147 GVRPDVITYGTLINGFCRTGNLSVALRLHKKM----------------VSGDYENGLISK 190
           G +PD   Y  ++   C+  NL  A +L  +M                +SG  ++G I +
Sbjct: 264 GCKPDATIYSYMVLAHCKLENLDEAFKLFLEMAVESKAPLNNVAWTAFLSGLCKSGKIEQ 323

Query: 191 -------------TNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHG 237
                        ++   Y ++I  L + G +DKA+E  LE+ GR I P+   C ++I  
Sbjct: 324 AFEACRTMQESLSSSQPVYDMLIRLLIESGRIDKAEEACLEIAGRNIQPSSGTCHSVIQE 383

Query: 238 FCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQR--GLN 295
            C AG  +    L   M+  G  P++ T +++I+ LCK  KI EA   L+ M ++    +
Sbjct: 384 LCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMDRKISSRS 443

Query: 296 PDRFTYNSLMDGYCLVGRIDTAREIFLSMHS-KGCKHTVVSYNILINGYCKILNVEEAMS 354
              F+YNSL++  C   ++  A  IF +M S +     VVSY+ILI+G+CKI  +  A  
Sbjct: 444 SSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSFVPDVVSYSILIDGFCKIDELGRAEK 503

Query: 355 LYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLC 414
           LY+Q+I       V TYN  L+GL + G+   AQ +++EM      PD+ TY+ LI G  
Sbjct: 504 LYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMVAAGCSPDVITYSTLIHGFS 563

Query: 415 KNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVV 474
                 +A +LF  +           +NCL+ GLCK  + D A ELF K+ ++G  P  V
Sbjct: 564 LARKHDQAHELFETMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDRV 623

Query: 475 TYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKM 534
           TY+ +++G C  GK+E+A +    M   G  P+VV +N L+ GF +  K  +  +L   M
Sbjct: 624 TYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEAKQLFQVM 683

Query: 535 AEPERNLVPDDTTFSIVVDLLAKDEKYHECSAV 567
               R   PD  + +I++D L+K ++  +   V
Sbjct: 684 V--SRQCKPDTVSHNIMIDGLSKAKRLDDAVEV 714



 Score =  218 bits (556), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 131/393 (33%), Positives = 209/393 (53%), Gaps = 6/393 (1%)

Query: 127 LCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENG 186
           LC   R+  A  L + MI  G  PD+ T+  LIN  C+   +  A    ++ + G     
Sbjct: 384 LCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEA----QEFLQGMDRKI 439

Query: 187 LISKTNIFSYSIIIDSLCKEGLVDKAKELFLEM-KGRGINPAVVVCTTLIHGFCCAGNWE 245
               ++ FSY+ +++SLCK   V +A  +F  M   R   P VV  + LI GFC      
Sbjct: 440 SSRSSSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSFVPDVVSYSILIDGFCKIDELG 499

Query: 246 EVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLM 305
               L+ +M+DL   PN+ T+N  ++ L + G+I +A G+ E M+  G +PD  TY++L+
Sbjct: 500 RAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMVAAGCSPDVITYSTLI 559

Query: 306 DGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVR 365
            G+ L  + D A E+F +M S+GC+   V+YN L++G CK    +EA  L+R+++  G  
Sbjct: 560 HGFSLARKHDQAHELFETMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCD 619

Query: 366 QTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKL 425
              +TY TLL G    G+   A ++FDEM     +PD+  YN L+ G  +     EA +L
Sbjct: 620 PDRVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEAKQL 679

Query: 426 FHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQK-GLVPTVVTYSIMIHGLC 484
           F ++   + +      N +IDGL KA RLD+A E+F ++ Q  G  P +VTY+ +I GLC
Sbjct: 680 FQVMVSRQCKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLC 739

Query: 485 RKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHG 517
            + +L +A      +++   +P+   FN L+  
Sbjct: 740 GEQRLSEAMKVFKEIDRLKLSPDPHAFNVLLEA 772



 Score =  206 bits (523), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 134/462 (29%), Positives = 235/462 (50%), Gaps = 41/462 (8%)

Query: 20  KLSSLFKSPRQIA-AVSSPETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSF 78
           K+   F++ R +  ++SS +   +  +    +SG I+  E         ++QPS    + 
Sbjct: 320 KIEQAFEACRTMQESLSSSQPVYDMLIRLLIESGRIDKAEEACLEIAGRNIQPSS--GTC 377

Query: 79  NLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILIN--CFGNKER----------- 125
           + +   + K    D+ +S    ++  G  PD  T ++LIN  C  +K +           
Sbjct: 378 HSVIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMDR 437

Query: 126 -----------------GLCVENRIKEATWLFKNMIA-FGVRPDVITYGTLINGFCRTGN 167
                             LC   ++ +A  +F  M++     PDV++Y  LI+GFC+   
Sbjct: 438 KISSRSSSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSFVPDVVSYSILIDGFCKIDE 497

Query: 168 LSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPA 227
           L  A +L+K+M+       L    N+ +Y+  ++ L ++G +  A+ ++ EM   G +P 
Sbjct: 498 LGRAEKLYKQMID------LNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMVAAGCSPD 551

Query: 228 VVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLE 287
           V+  +TLIHGF  A   ++ + LF  M+  G RPN +T+N ++  LCK  K +EA+ L  
Sbjct: 552 VITYSTLIHGFSLARKHDQAHELFETMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFR 611

Query: 288 LMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKIL 347
            M++RG +PDR TY +L+ G+C VG+I+ A E+F  M SKG    VV+YN L+ G+ +  
Sbjct: 612 KMVERGCDPDRVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAG 671

Query: 348 NVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKL-YNVEPDLSTY 406
              EA  L++ ++S   +   +++N ++ GL +A +   A ++F+ M+  +   PDL TY
Sbjct: 672 KPGEAKQLFQVMVSRQCKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTY 731

Query: 407 NILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGL 448
           N LI GLC    + EA+K+F  ++  K       FN L++ +
Sbjct: 732 NSLIFGLCGEQRLSEAMKVFKEIDRLKLSPDPHAFNVLLEAI 773



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 118/436 (27%), Positives = 225/436 (51%), Gaps = 14/436 (3%)

Query: 125 RGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYE 184
           R L    RI +A      +    ++P   T  ++I   C+ G +  AL L + M+   Y 
Sbjct: 347 RLLIESGRIDKAEEACLEIAGRNIQPSSGTCHSVIQELCKAGRVDSALSLLETMIKRGY- 405

Query: 185 NGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVC---TTLIHGFCCA 241
                  ++ ++S++I+ LCK   + +A+E FL+   R I+     C    +L++  C A
Sbjct: 406 -----CPDMATHSMLINELCKADKIQEAQE-FLQGMDRKISSRSSSCFSYNSLLNSLCKA 459

Query: 242 GNWEEVNGLFIEML-DLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFT 300
               +   +F  M+ +    P++++++++ID  CK  ++  A  L + MI     P+  T
Sbjct: 460 KKVHQAFAIFSTMVSERSFVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTT 519

Query: 301 YNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQII 360
           YN+ ++G    GRI  A+ ++  M + GC   V++Y+ LI+G+      ++A  L+  +I
Sbjct: 520 YNAFLNGLMRKGRIADAQGVYEEMVAAGCSPDVITYSTLIHGFSLARKHDQAHELFETMI 579

Query: 361 SNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQ 420
           S G R   +TYN LL GL +  +   A +LF +M     +PD  TY  L+ G C    ++
Sbjct: 580 SRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDRVTYTTLLYGFCNVGKIE 639

Query: 421 EAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMI 480
           +AV++F  +     +  +  +NCL+ G  +AG+   A +LF  +  +   P  V+++IMI
Sbjct: 640 QAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEAKQLFQVMVSRQCKPDTVSHNIMI 699

Query: 481 HGLCRKGKLEKANDFLLYMEKN-GCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPER 539
            GL +  +L+ A +    ME++ GC+P++VT+N+L+ G     + S+ +++  ++     
Sbjct: 700 DGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEI--DRL 757

Query: 540 NLVPDDTTFSIVVDLL 555
            L PD   F+++++ +
Sbjct: 758 KLSPDPHAFNVLLEAI 773



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 129/503 (25%), Positives = 213/503 (42%), Gaps = 83/503 (16%)

Query: 135 EATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIF 194
           EA   F+ + A   + DV TY  L++   R  +L  A ++ +KMV+     G++   N F
Sbjct: 112 EALTFFRWLQARNFKHDVFTYNCLLDKLIRHRDLKQAGQVFEKMVA----QGVV--PNGF 165

Query: 195 SYSIIIDSLCKEGLVDKAKELFLEMKGRGINPA------VVVC----------------- 231
           +Y++++ S C E   D+A   F EM  +G  P+      V  C                 
Sbjct: 166 TYAVLVQSSCYERNSDEAVRFFGEMVDKGFKPSSTLYQKVTECLKATGKEGEFSRVFGRD 225

Query: 232 ------------TTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMI--------- 270
                         L+  F       E + LF  M+  G +P+   ++ M+         
Sbjct: 226 LEKRVAVEMMLKKALLVNFVIQDKAIEASKLFRAMVKSGCKPDATIYSYMVLAHCKLENL 285

Query: 271 ---------------------------DCLCKGGKINEANGLLELMIQRGLNPDRFTYNS 303
                                        LCK GKI +A      M Q  L+  +  Y+ 
Sbjct: 286 DEAFKLFLEMAVESKAPLNNVAWTAFLSGLCKSGKIEQAFEACRTM-QESLSSSQPVYDM 344

Query: 304 LMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNG 363
           L+      GRID A E  L +  +  + +  + + +I   CK   V+ A+SL   +I  G
Sbjct: 345 LIRLLIESGRIDKAEEACLEIAGRNIQPSSGTCHSVIQELCKAGRVDSALSLLETMIKRG 404

Query: 364 VRQTVITYNTLLSGLFQAGQAGYAQKLFDEM--KLYNVEPDLSTYNILIDGLCKNNCVQE 421
               + T++ L++ L +A +   AQ+    M  K+ +      +YN L++ LCK   V +
Sbjct: 405 YCPDMATHSMLINELCKADKIQEAQEFLQGMDRKISSRSSSCFSYNSLLNSLCKAKKVHQ 464

Query: 422 AVKLFH-MLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMI 480
           A  +F  M+    F   +  ++ LIDG CK   L  A +L+ ++     VP V TY+  +
Sbjct: 465 AFAIFSTMVSERSFVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFL 524

Query: 481 HGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERN 540
           +GL RKG++  A      M   GC+P+V+T++TL+HGF    K  +  EL   M    R 
Sbjct: 525 NGLMRKGRIADAQGVYEEMVAAGCSPDVITYSTLIHGFSLARKHDQAHELFETMI--SRG 582

Query: 541 LVPDDTTFSIVVDLLAKDEKYHE 563
             P+  T++ ++  L K+ K  E
Sbjct: 583 CRPNAVTYNCLLHGLCKESKPDE 605



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 77/335 (22%), Positives = 136/335 (40%), Gaps = 42/335 (12%)

Query: 265 TFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSM 324
           T   +I  L  GG   EA      +  R    D FTYN L+D       +  A ++F  M
Sbjct: 99  TVGAVIKHLRDGG---EALTFFRWLQARNFKHDVFTYNCLLDKLIRHRDLKQAGQVFEKM 155

Query: 325 HSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQA 384
            ++G      +Y +L+   C   N +EA+  + +++  G + +   Y  +   L   G+ 
Sbjct: 156 VAQGVVPNGFTYAVLVQSSCYERNSDEAVRFFGEMVDKGFKPSSTLYQKVTECLKATGKE 215

Query: 385 G-----------------------------------YAQKLFDEMKLYNVEPDLSTYNIL 409
           G                                    A KLF  M     +PD + Y+ +
Sbjct: 216 GEFSRVFGRDLEKRVAVEMMLKKALLVNFVIQDKAIEASKLFRAMVKSGCKPDATIYSYM 275

Query: 410 IDGLCKNNCVQEAVKLF-HMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKG 468
           +   CK   + EA KLF  M   +K       +   + GLCK+G+++ A+E    + Q+ 
Sbjct: 276 VLAHCKLENLDEAFKLFLEMAVESKAPLNNVAWTAFLSGLCKSGKIEQAFEACRTM-QES 334

Query: 469 LVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVV 528
           L  +   Y ++I  L   G+++KA +  L +      P+  T ++++    +  +    +
Sbjct: 335 LSSSQPVYDMLIRLLIESGRIDKAEEACLEIAGRNIQPSSGTCHSVIQELCKAGRVDSAL 394

Query: 529 ELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
            LL  M   +R   PD  T S++++ L K +K  E
Sbjct: 395 SLLETMI--KRGYCPDMATHSMLINELCKADKIQE 427


>gi|357140125|ref|XP_003571621.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic-like [Brachypodium distachyon]
          Length = 814

 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 149/568 (26%), Positives = 270/568 (47%), Gaps = 55/568 (9%)

Query: 21  LSSLFKSPRQIAAVSSPETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNL 80
           LS L  +  Q +A + P   L + L   CKSG   ++EA    G M   + +P + +F +
Sbjct: 252 LSDLIHAGLQQSAGAVPYNLLMDAL---CKSG--RVDEAIRLKGRMEESRVAPSMVTFGI 306

Query: 81  LFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLF 140
           L   + ++  +  V +  R++  +G+ P+ +  N LI+         C +    EA  LF
Sbjct: 307 LINGLKRSDRFGEVGALLREMEGLGITPNEVICNELIDWH-------CRKGHFTEAIRLF 359

Query: 141 KNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIII 200
             M++  ++   +TY  +    C+ G +  A R+ ++M+S     G+   + +F+ S++ 
Sbjct: 360 DEMVSKEMKSTAVTYNLIARALCKEGEMERAERILEEMLS----TGMTIHSGLFN-SVVA 414

Query: 201 DSLCKEGLVDKAKELFLEMKGRGINP---AVVVCT------------------------- 232
             L + G ++    L  EM  RG+ P    +  CT                         
Sbjct: 415 GLLQRTGRLESVVRLISEMVKRGMKPNDALMTACTKQLCQGRRHQEAVGIWLKMLEKGLC 474

Query: 233 -------TLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGL 285
                   LIHG C   N +    +   M++ G   + +T+N+MI   CK  KI EA  L
Sbjct: 475 INIATSNALIHGLCEGKNMKGATEVLRTMVNKGMELDNITYNIMIQGCCKDSKIEEALKL 534

Query: 286 LELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCK 345
            + MI++G  PD + +NS++  YC +G+++ A  +   M  +G +  VVSY  +I+GYCK
Sbjct: 535 RDDMIRKGFKPDAYMFNSIIHAYCDLGKMEEALHLLGQMKIEGVQPDVVSYGTIIDGYCK 594

Query: 346 ILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLST 405
             ++++A     ++++ G++   + YN L+ G  + G    A  + D M+   ++P   T
Sbjct: 595 AKDIQKANEYLNELMACGLKPNAVIYNALIGGYGRNGNISGAIGVLDTMESIGIQPTNVT 654

Query: 406 YNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLP 465
           Y  L+  +C    V EA  +F     N  E G+  +  +I GLCK G++D A   F ++ 
Sbjct: 655 YCSLMHWMCHAGLVDEAKTMFEQSRKNSIEVGVVGYTIMIQGLCKIGKMDEAMNYFEEMR 714

Query: 466 QKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTS 525
            + + P  +TY+ +++  C+ G  E+A+     M  +G  P+ V++NTL+ GF Q +   
Sbjct: 715 SRSIPPNKITYTTLMYAYCKSGNNEEASKLFDEMVSSGIVPDNVSYNTLVTGFSQVDSLD 774

Query: 526 KVVELLHKMAEPERNLVPDDTTFSIVVD 553
           K +E   K AE    +  +D   +++V+
Sbjct: 775 KAIE---KAAEISSIMTQNDCLDNVLVN 799



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 123/490 (25%), Positives = 210/490 (42%), Gaps = 74/490 (15%)

Query: 114 NILIN-CFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVAL 172
           ++LIN C  +  RG      ++ A   F  + +    P V T   L+    RTGNL    
Sbjct: 159 DLLINTCVTSSARG-----SLRLAVDAFHVLSSRRASPSVKTCNALLEALARTGNLGATC 213

Query: 173 RLHKKM--------------------------------VSGDYENGLISKTNIFSYSIII 200
           ++  +M                                +S     GL        Y++++
Sbjct: 214 KVFDEMRDCKTVTPNGYSYTSMIKALCKVGKVDDGFKILSDLIHAGLQQSAGAVPYNLLM 273

Query: 201 DSLCKEGLVDKA-----------------------------------KELFLEMKGRGIN 225
           D+LCK G VD+A                                     L  EM+G GI 
Sbjct: 274 DALCKSGRVDEAIRLKGRMEESRVAPSMVTFGILINGLKRSDRFGEVGALLREMEGLGIT 333

Query: 226 PAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGL 285
           P  V+C  LI   C  G++ E   LF EM+    +   +T+N++   LCK G++  A  +
Sbjct: 334 PNEVICNELIDWHCRKGHFTEAIRLFDEMVSKEMKSTAVTYNLIARALCKEGEMERAERI 393

Query: 286 LELMIQRGLNPDRFTYNSLMDGYC-LVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYC 344
           LE M+  G+      +NS++ G     GR+++   +   M  +G K             C
Sbjct: 394 LEEMLSTGMTIHSGLFNSVVAGLLQRTGRLESVVRLISEMVKRGMKPNDALMTACTKQLC 453

Query: 345 KILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLS 404
           +    +EA+ ++ +++  G+   + T N L+ GL +      A ++   M    +E D  
Sbjct: 454 QGRRHQEAVGIWLKMLEKGLCINIATSNALIHGLCEGKNMKGATEVLRTMVNKGMELDNI 513

Query: 405 TYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKL 464
           TYNI+I G CK++ ++EA+KL   +    F+    +FN +I   C  G+++ A  L  ++
Sbjct: 514 TYNIMIQGCCKDSKIEEALKLRDDMIRKGFKPDAYMFNSIIHAYCDLGKMEEALHLLGQM 573

Query: 465 PQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKT 524
             +G+ P VV+Y  +I G C+   ++KAN++L  +   G  PN V +N L+ G+ +N   
Sbjct: 574 KIEGVQPDVVSYGTIIDGYCKAKDIQKANEYLNELMACGLKPNAVIYNALIGGYGRNGNI 633

Query: 525 SKVVELLHKM 534
           S  + +L  M
Sbjct: 634 SGAIGVLDTM 643



 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 96/356 (26%), Positives = 159/356 (44%), Gaps = 6/356 (1%)

Query: 212 AKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGP-RPNLLTFNVMI 270
           A + F  +  R  +P+V  C  L+      GN      +F EM D     PN  ++  MI
Sbjct: 177 AVDAFHVLSSRRASPSVKTCNALLEALARTGNLGATCKVFDEMRDCKTVTPNGYSYTSMI 236

Query: 271 DCLCKGGKINEANGLLELMIQRGLNPD--RFTYNSLMDGYCLVGRIDTAREIFLSMHSKG 328
             LCK GK+++   +L  +I  GL        YN LMD  C  GR+D A  +   M    
Sbjct: 237 KALCKVGKVDDGFKILSDLIHAGLQQSAGAVPYNLLMDALCKSGRVDEAIRLKGRMEESR 296

Query: 329 CKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQ 388
              ++V++ ILING  +     E  +L R++   G+    +  N L+    + G    A 
Sbjct: 297 VAPSMVTFGILINGLKRSDRFGEVGALLREMEGLGITPNEVICNELIDWHCRKGHFTEAI 356

Query: 389 KLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGL 448
           +LFDEM    ++    TYN++   LCK   ++ A ++   +          +FN ++ GL
Sbjct: 357 RLFDEMVSKEMKSTAVTYNLIARALCKEGEMERAERILEEMLSTGMTIHSGLFNSVVAGL 416

Query: 449 C-KAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPN 507
             + GRL++   L  ++ ++G+ P     +     LC+  + ++A    L M + G   N
Sbjct: 417 LQRTGRLESVVRLISEMVKRGMKPNDALMTACTKQLCQGRRHQEAVGIWLKMLEKGLCIN 476

Query: 508 VVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
           + T N L+HG  +        E+L  M      L  D+ T++I++    KD K  E
Sbjct: 477 IATSNALIHGLCEGKNMKGATEVLRTMVNKGMEL--DNITYNIMIQGCCKDSKIEE 530


>gi|413915966|gb|AFW55898.1| hypothetical protein ZEAMMB73_909442, partial [Zea mays]
          Length = 694

 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 145/498 (29%), Positives = 248/498 (49%), Gaps = 15/498 (3%)

Query: 71  PSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVE 130
           P+P + +FN++   + K        + + ++ ++G  PD +T N LI+ +G      C E
Sbjct: 195 PAPNVFTFNIVIDFLCKQGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGK-----CGE 249

Query: 131 NRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISK 190
             ++E   L   M   G   DV+TY  LIN F + G +  A     +M        L   
Sbjct: 250 --LEEVELLVSEMRKSGCAADVVTYNALINCFSKFGWIEKAYSYFGEM------KRLGVM 301

Query: 191 TNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGL 250
            N+ + S  +D+ CKEGLV +A +LF +M+ RG+ P     T+L+ G C AG  ++   L
Sbjct: 302 ANVVTLSTFVDAFCKEGLVREAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVL 361

Query: 251 FIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCL 310
             EM+  G  PN++T+ VM+D LCK GK+  A+ +L LM + G+  +   Y +L+ G+ +
Sbjct: 362 LDEMVHQGLVPNVVTYTVMVDGLCKEGKVAVADDVLSLMERAGVKANELLYTTLIHGHFM 421

Query: 311 VGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVIT 370
               + A ++   M +KG +  V  Y  LI G CK+  ++EA SL  ++   G+R   + 
Sbjct: 422 NKNSERALDLLNEMKNKGMELDVSLYGTLIWGLCKVQKLDEAKSLLHKMDDCGLRPNTVI 481

Query: 371 YNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLE 430
           Y T++   F+AG+   A  L  ++    ++P++ TY  LIDGLCK   + EA+  F  + 
Sbjct: 482 YTTIMDAFFKAGKESEAVALLHKIPDSGLQPNVVTYCALIDGLCKAGSIYEAISHFDKMR 541

Query: 431 MNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLE 490
               +  ++++  LIDG CK G L  A  L +++  KG+    V Y+ +I G  ++G L+
Sbjct: 542 ELGLDPNVQVYTTLIDGFCKIGSLSKAVHLMNEMVDKGMSLDKVVYTSLIDGHMKQGDLQ 601

Query: 491 KANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSI 550
            A      M + G   ++  +   + GF   N   +   +L +M      + PD T ++ 
Sbjct: 602 GAFALKAKMIETGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGT--GITPDKTAYNC 659

Query: 551 VVDLLAKDEKYHECSAVS 568
           ++    K     E S++ 
Sbjct: 660 LIRKYQKLGNMEEASSLQ 677



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 148/479 (30%), Positives = 232/479 (48%), Gaps = 21/479 (4%)

Query: 76  SSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLN-ILINCFGNKERGLCVENRIK 134
           S F+ L   +A +   D  +    ++  + + P+  T N IL+    N++ GL       
Sbjct: 134 SVFDTLLSLLADHGLLDDAVRALARVRQLRVPPNTRTCNHILLRLARNRQGGL------- 186

Query: 135 EATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIF 194
               LF+++ A    P+V T+  +I+  C+ G L  A  L  +M        +    ++ 
Sbjct: 187 -VRRLFEHLPA----PNVFTFNIVIDFLCKQGELVEARALFVRM------KAMGCSPDVV 235

Query: 195 SYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEM 254
           +Y+ +ID   K G +++ + L  EM+  G    VV    LI+ F   G  E+    F EM
Sbjct: 236 TYNSLIDGYGKCGELEEVELLVSEMRKSGCAADVVTYNALINCFSKFGWIEKAYSYFGEM 295

Query: 255 LDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRI 314
             LG   N++T +  +D  CK G + EA  L   M  RG+ P+ FTY SL+DG C  GR+
Sbjct: 296 KRLGVMANVVTLSTFVDAFCKEGLVREAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRL 355

Query: 315 DTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTL 374
           D A  +   M  +G    VV+Y ++++G CK   V  A  +   +   GV+   + Y TL
Sbjct: 356 DDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAVADDVLSLMERAGVKANELLYTTL 415

Query: 375 LSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKF 434
           + G F    +  A  L +EMK   +E D+S Y  LI GLCK   + EA  L H ++    
Sbjct: 416 IHGHFMNKNSERALDLLNEMKNKGMELDVSLYGTLIWGLCKVQKLDEAKSLLHKMDDCGL 475

Query: 435 EFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKAND 494
                I+  ++D   KAG+   A  L HK+P  GL P VVTY  +I GLC+ G + +A  
Sbjct: 476 RPNTVIYTTIMDAFFKAGKESEAVALLHKIPDSGLQPNVVTYCALIDGLCKAGSIYEAIS 535

Query: 495 FLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
               M + G  PNV  + TL+ GF +    SK V L+++M +   +L  D   ++ ++D
Sbjct: 536 HFDKMRELGLDPNVQVYTTLIDGFCKIGSLSKAVHLMNEMVDKGMSL--DKVVYTSLID 592



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 122/453 (26%), Positives = 200/453 (44%), Gaps = 48/453 (10%)

Query: 48  NCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLL 107
           NC S    + +A  +FG M  +                                   G++
Sbjct: 277 NCFSKFGWIEKAYSYFGEMKRL-----------------------------------GVM 301

Query: 108 PDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGN 167
            + +TL+  ++ F       C E  ++EA  LF  M   G+ P+  TY +L++G C+ G 
Sbjct: 302 ANVVTLSTFVDAF-------CKEGLVREAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGR 354

Query: 168 LSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPA 227
           L  A+ L  +MV      GL+   N+ +Y++++D LCKEG V  A ++   M+  G+   
Sbjct: 355 LDDAIVLLDEMV----HQGLVP--NVVTYTVMVDGLCKEGKVAVADDVLSLMERAGVKAN 408

Query: 228 VVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLE 287
            ++ TTLIHG     N E    L  EM + G   ++  +  +I  LCK  K++EA  LL 
Sbjct: 409 ELLYTTLIHGHFMNKNSERALDLLNEMKNKGMELDVSLYGTLIWGLCKVQKLDEAKSLLH 468

Query: 288 LMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKIL 347
            M   GL P+   Y ++MD +   G+   A  +   +   G +  VV+Y  LI+G CK  
Sbjct: 469 KMDDCGLRPNTVIYTTIMDAFFKAGKESEAVALLHKIPDSGLQPNVVTYCALIDGLCKAG 528

Query: 348 NVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYN 407
           ++ EA+S + ++   G+   V  Y TL+ G  + G    A  L +EM    +  D   Y 
Sbjct: 529 SIYEAISHFDKMRELGLDPNVQVYTTLIDGFCKIGSLSKAVHLMNEMVDKGMSLDKVVYT 588

Query: 408 ILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQK 467
            LIDG  K   +Q A  L   +     +  +  + C I G C    +  A  +  ++   
Sbjct: 589 SLIDGHMKQGDLQGAFALKAKMIETGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGT 648

Query: 468 GLVPTVVTYSIMIHGLCRKGKLEKANDFLLYME 500
           G+ P    Y+ +I    + G +E+A+     ME
Sbjct: 649 GITPDKTAYNCLIRKYQKLGNMEEASSLQNEME 681


>gi|449481246|ref|XP_004156125.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At2g02150-like [Cucumis
           sativus]
          Length = 822

 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 144/505 (28%), Positives = 256/505 (50%), Gaps = 17/505 (3%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
           N  LH   KSG  N    R FF  M     +P + ++N++   + K    +     + ++
Sbjct: 199 NFLLHRLSKSG--NGQLVRKFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQM 256

Query: 102 VSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLING 161
             +GL PD +T N LI+ +G           ++E   LF  M   G  PD+ITY  LIN 
Sbjct: 257 REMGLSPDVVTYNSLIDGYGKV-------GSLEEVASLFNEMKDVGCVPDIITYNGLINC 309

Query: 162 FCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKG 221
           +C+   +  A     +M +    NGL  K N+ +YS +ID+ CKEG++  A +L  +M+ 
Sbjct: 310 YCKFEKMPRAFEYFSEMKN----NGL--KPNVVTYSTLIDAFCKEGMMQGAIKLLXDMRR 363

Query: 222 RGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINE 281
            G+ P     T+LI   C AGN  E   L  +ML  G + N++T+  ++D LCK G++ E
Sbjct: 364 TGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIE 423

Query: 282 ANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILIN 341
           A  +   M++ G++P++  Y +L+ GY    R++ A +I   M     K  ++ Y  +I 
Sbjct: 424 AEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIW 483

Query: 342 GYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEP 401
           G+C    +EE   +  ++ S G+    +   T++   F+AG++  A   F EM+   VE 
Sbjct: 484 GHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEA 543

Query: 402 DLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELF 461
            + TY +LIDGLC+   V+ AV  F  +     +  + ++  LIDGLC    +++A +LF
Sbjct: 544 TIVTYCVLIDGLCEAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCXNNCIESAKKLF 603

Query: 462 HKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQN 521
            ++  +G+ P +  ++ +I G  + G L++A   +  M +     ++  + +L+ GF Q 
Sbjct: 604 DEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVSGFSQC 663

Query: 522 NKTSKVVELLHKMAEPERNLVPDDT 546
            +  +  +  ++M   E+ ++P++ 
Sbjct: 664 GELHQARKFFNEMI--EKGILPEEV 686



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 142/486 (29%), Positives = 239/486 (49%), Gaps = 15/486 (3%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CK G  +L  +R  F  M  M  SP + ++N L     K    + V S + ++  +G +P
Sbjct: 241 CKEG--DLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVP 298

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           D +T N LINC+       C   ++  A   F  M   G++P+V+TY TLI+ FC+ G +
Sbjct: 299 DIITYNGLINCY-------CKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMM 351

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
             A++L   M       GL+   N F+Y+ +ID+ CK G + +A +L  +M   G+   +
Sbjct: 352 QGAIKLLXDM----RRTGLLP--NEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNI 405

Query: 229 VVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLEL 288
           V  T L+ G C AG   E   +F  ML  G  PN   +  ++    K  ++ +A  +L+ 
Sbjct: 406 VTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQ 465

Query: 289 MIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILN 348
           M +  + PD   Y S++ G+C   +++  + I   M S+G     V    +I+ Y K   
Sbjct: 466 MTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGK 525

Query: 349 VEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNI 408
             +A++ ++++   GV  T++TY  L+ GL +AG    A   F  M    ++P+++ Y  
Sbjct: 526 SSDALNFFQEMQDVGVEATIVTYCVLIDGLCEAGIVELAVDYFCRMLSLGLQPNVAVYTS 585

Query: 409 LIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKG 468
           LIDGLC NNC++ A KLF  ++       I  F  LIDG  K G L  A  L  ++ +  
Sbjct: 586 LIDGLCXNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELA 645

Query: 469 LVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVV 528
           +   +  Y+ ++ G  + G+L +A  F   M + G  P  V    L+  + +  +  + +
Sbjct: 646 IEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLREYYKRGQLDEAI 705

Query: 529 ELLHKM 534
           EL ++M
Sbjct: 706 ELKNEM 711



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 111/365 (30%), Positives = 186/365 (50%), Gaps = 2/365 (0%)

Query: 196 YSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEML 255
           + ++     + GL+++A E F  M+     P    C  L+H    +GN + V   F +M+
Sbjct: 163 FDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDMI 222

Query: 256 DLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRID 315
             G  P++ T+NVMID LCK G +  +  L   M + GL+PD  TYNSL+DGY  VG ++
Sbjct: 223 GAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLE 282

Query: 316 TAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLL 375
               +F  M   GC   +++YN LIN YCK   +  A   + ++ +NG++  V+TY+TL+
Sbjct: 283 EVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLI 342

Query: 376 SGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFE 435
               + G    A KL  +M+   + P+  TY  LID  CK   + EA KL + +     +
Sbjct: 343 DAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVK 402

Query: 436 FGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDF 495
             I  +  L+DGLCKAGR+  A E+F  + + G+ P    Y+ ++HG  +  ++E A   
Sbjct: 403 LNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKI 462

Query: 496 LLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLL 555
           L  M +    P+++ + +++ G     K  +   +L +M    R +  +    + ++D  
Sbjct: 463 LKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEM--KSRGISANPVISTTIIDAY 520

Query: 556 AKDEK 560
            K  K
Sbjct: 521 FKAGK 525



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 100/315 (31%), Positives = 161/315 (51%), Gaps = 2/315 (0%)

Query: 230 VCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELM 289
           V   L   F   G  EE N  F  M +    P   + N ++  L K G           M
Sbjct: 162 VFDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDM 221

Query: 290 IQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNV 349
           I  G+ P  FTYN ++D  C  G ++ +R +F+ M   G    VV+YN LI+GY K+ ++
Sbjct: 222 IGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSL 281

Query: 350 EEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNIL 409
           EE  SL+ ++   G    +ITYN L++   +  +   A + F EMK   ++P++ TY+ L
Sbjct: 282 EEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTL 341

Query: 410 IDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGL 469
           ID  CK   +Q A+KL   +           +  LID  CKAG L  AW+L + + Q G+
Sbjct: 342 IDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGV 401

Query: 470 VPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVE 529
              +VTY+ ++ GLC+ G++ +A +    M K+G +PN   +  L+HG+++  +    ++
Sbjct: 402 KLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMK 461

Query: 530 LLHKMAEPERNLVPD 544
           +L +M E   N+ PD
Sbjct: 462 ILKQMTEC--NIKPD 474



 Score =  148 bits (374), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 110/417 (26%), Positives = 189/417 (45%), Gaps = 34/417 (8%)

Query: 48  NCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLL 107
           NC      +  A  +F  M +    P + +++ L  A  K       I     +   GLL
Sbjct: 308 NCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLLXDMRRTGLL 367

Query: 108 PDFLTLNILI--NC-FGNKER-------------------------GLCVENRIKEATWL 139
           P+  T   LI  NC  GN                            GLC   R+ EA  +
Sbjct: 368 PNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEV 427

Query: 140 FKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSII 199
           F++M+  G+ P+   Y  L++G+ +   +  A+++ K+M   +       K ++  Y  I
Sbjct: 428 FRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNI------KPDLILYGSI 481

Query: 200 IDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGP 259
           I   C +  +++ K +  EMK RGI+   V+ TT+I  +  AG   +    F EM D+G 
Sbjct: 482 IWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGV 541

Query: 260 RPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTARE 319
              ++T+ V+ID LC+ G +  A      M+  GL P+   Y SL+DG C    I++A++
Sbjct: 542 EATIVTYCVLIDGLCEAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCXNNCIESAKK 601

Query: 320 IFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLF 379
           +F  M  +G    + ++  LI+G  K  N++EA+ L  ++    +   +  Y +L+SG  
Sbjct: 602 LFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVSGFS 661

Query: 380 QAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEF 436
           Q G+   A+K F+EM    + P+      L+    K   + EA++L + +E   + F
Sbjct: 662 QCGELHQARKFFNEMIEKGILPEEVLCICLLREYYKRGQLDEAIELKNEMERMAYSF 718



 Score = 41.2 bits (95), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 30/131 (22%), Positives = 56/131 (42%), Gaps = 2/131 (1%)

Query: 437 GIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFL 496
           G  +F+ L     + G L+ A E F ++     +P   + + ++H L + G  +    F 
Sbjct: 159 GSGVFDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFF 218

Query: 497 LYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLA 556
             M   G AP+V T+N ++    +         L  +M   E  L PD  T++ ++D   
Sbjct: 219 NDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMR--EMGLSPDVVTYNSLIDGYG 276

Query: 557 KDEKYHECSAV 567
           K     E +++
Sbjct: 277 KVGSLEEVASL 287


>gi|218188645|gb|EEC71072.1| hypothetical protein OsI_02831 [Oryza sativa Indica Group]
          Length = 800

 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 141/456 (30%), Positives = 233/456 (51%), Gaps = 16/456 (3%)

Query: 99  RKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTL 158
           R++   GLLP     N++I       +GL  +   K+A  LFK M   G+ PD  TY  L
Sbjct: 341 RQMRDHGLLPSTNEFNMVI-------KGLLNDKLWKDAVSLFKEMADSGI-PDAFTYNIL 392

Query: 159 INGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLE 218
           I+  C+   +  AL L +KM     E G+  K  I +Y  ++   C  G +D+A +L+ E
Sbjct: 393 IHWLCQRRKIREALNLWEKM----NETGV--KPYIVTYHSLLLCYCVNGCMDEAVKLYTE 446

Query: 219 MKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGK 278
           M G+G  P VV  TTL+ G      +++   L  EM   G   N  T+N +I+ LC  G+
Sbjct: 447 MPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGR 506

Query: 279 INEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNI 338
           + E   +L+     G  P   TYNS+++G+   G + +A  ++  M +KG    +V+Y  
Sbjct: 507 VCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTS 566

Query: 339 LINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYN 398
            I+GYCK    + A+ +   +   G+R  +  YN+L+ G  Q G   +A ++   M    
Sbjct: 567 FIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIYGFCQEGNMSHALQVLVLMLKDG 626

Query: 399 VEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAW 458
           + P++S YN  I G      ++EA++ +  +     +     +  LIDG  K G +  A 
Sbjct: 627 LLPNISVYNSFITGYKNLKMMEEALRFYEKMIKEGIDLDTATYTTLIDGFSKDGNVTFAL 686

Query: 459 ELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGF 518
           +L+ ++  KG +P  +T++ + HGLCR G ++ A   L  M +    PNV+ +N L++G+
Sbjct: 687 KLYSEMVAKGNIPDHITFTALTHGLCRNGDIDDARKLLDEMNRLDIRPNVLMYNMLINGY 746

Query: 519 LQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDL 554
           L+N K  +   L  +M   ER ++PDDTT+ I+V +
Sbjct: 747 LRNGKLQEAFRLHDEML--ERKIMPDDTTYDILVGM 780



 Score =  161 bits (408), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 123/412 (29%), Positives = 199/412 (48%), Gaps = 9/412 (2%)

Query: 142 NMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIID 201
           +M A GV PD  +   L+    R+ + + AL L  +M       G     + + + +++ 
Sbjct: 132 SMEARGVTPDAKSRTDLLAVTARSASAADALALLAEM------RGKGHPLDAWMFDVVMR 185

Query: 202 SLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRP 261
           +  KEG+ D A  LF EM    I P   VC+  I   C   +      +  +M D G  P
Sbjct: 186 ACFKEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKMQDAGFVP 245

Query: 262 NLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIF 321
              TFN ++D L KGG++ EA  + + ++  G         +LM GYCL   +  A +IF
Sbjct: 246 WDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIF 305

Query: 322 LSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQA 381
                 G   T V+Y +LI G  +    E+A  L RQ+  +G+  +   +N ++ GL   
Sbjct: 306 EETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLND 365

Query: 382 GQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIF 441
                A  LF EM    + PD  TYNILI  LC+   ++EA+ L+  +     +  I  +
Sbjct: 366 KLWKDAVSLFKEMADSGI-PDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTY 424

Query: 442 NCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEK 501
           + L+   C  G +D A +L+ ++P KG  P VVTY+ ++ G   K   +KA   L  M++
Sbjct: 425 HSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQ 484

Query: 502 NGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
           NG + N  T+NTL++G     +  +V E+L +  E E   VP   T++ +++
Sbjct: 485 NGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRF-ETE-GFVPTAMTYNSIIN 534



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 119/436 (27%), Positives = 194/436 (44%), Gaps = 40/436 (9%)

Query: 130 ENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLIS 189
           E    +A  LF  M A  + PD       I   C+  + + AL + +KM     + G + 
Sbjct: 190 EGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKM----QDAGFVP 245

Query: 190 KTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNG 249
               F+++ ++D L K G +++A  +  E+   G   +VV+ TTL+HG+C      +   
Sbjct: 246 WD--FTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALD 303

Query: 250 LFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGL--------------- 294
           +F E L  G  P  +T+ V+I    + G   +A  L   M   GL               
Sbjct: 304 IFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLL 363

Query: 295 -------------------NPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVS 335
                               PD FTYN L+   C   +I  A  ++  M+  G K  +V+
Sbjct: 364 NDKLWKDAVSLFKEMADSGIPDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVT 423

Query: 336 YNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMK 395
           Y+ L+  YC    ++EA+ LY ++   G    V+TY TL+ G         A  L  EMK
Sbjct: 424 YHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMK 483

Query: 396 LYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLD 455
              V  +  TYN LI+GLC    V E  ++    E   F      +N +I+G  KAG + 
Sbjct: 484 QNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMG 543

Query: 456 NAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLM 515
           +A+ ++ ++  KG+ P +VTY+  I G C+    + A   L  +   G  P++  +N+L+
Sbjct: 544 SAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLI 603

Query: 516 HGFLQNNKTSKVVELL 531
           +GF Q    S  +++L
Sbjct: 604 YGFCQEGNMSHALQVL 619


>gi|302767472|ref|XP_002967156.1| hypothetical protein SELMODRAFT_144844 [Selaginella moellendorffii]
 gi|300165147|gb|EFJ31755.1| hypothetical protein SELMODRAFT_144844 [Selaginella moellendorffii]
          Length = 651

 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 147/490 (30%), Positives = 234/490 (47%), Gaps = 81/490 (16%)

Query: 150 PDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLV 209
           P+  TYG LI GF   G+L +A++L ++M S  +E       N   ++ ++  LC  G V
Sbjct: 7   PNKFTYGILIRGFSSAGDLDIAIQLLEEMKSNGFEG------NAVVHTTLMKGLCDAGRV 60

Query: 210 DKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVM 269
            +A E F  M  +   P V+  T L+H  C AG ++E  G+  EM+  G  P+ +TF+ +
Sbjct: 61  VEALEHFRAM-AKDCAPDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTL 119

Query: 270 IDCLCKGGKINEANGLLELMIQRGL----------------------------------- 294
           ID LCK G   +A  +LE +IQRG+                                   
Sbjct: 120 IDGLCKFGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKG 179

Query: 295 -NPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAM 353
             P    +N +++G+C    +D+A ++   M  KGC   V ++ ILI G CK   V EA 
Sbjct: 180 FTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQ 239

Query: 354 SLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGL 413
            L  ++++ G    V+TY+T+++GL + GQ   A +LF  M+  N  P++ T+NILIDGL
Sbjct: 240 QLLEKMVTGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGL 299

Query: 414 CKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGL-VPT 472
           CK   ++EA +L+H +        I  +N LIDGLCK+ ++D A++LF  +P+ G+    
Sbjct: 300 CKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAAN 359

Query: 473 VVTYSIMIHGLCRKGKLEKA-------------NDFLLY--------------------- 498
            VTYS + HG    G++  A              D   Y                     
Sbjct: 360 AVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVE 419

Query: 499 -MEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAK 557
            M   G  P V T + ++ G  + N T + ++L   MA   R    D   +++VV+ +A+
Sbjct: 420 EMASKGFPPRVNTLSAVLGGLFEGNHTERAIQLFDSMA--ARGCTDDALIYNLVVEGMAR 477

Query: 558 DEKYHECSAV 567
             K+++  AV
Sbjct: 478 ASKHNKALAV 487



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 145/490 (29%), Positives = 230/490 (46%), Gaps = 54/490 (11%)

Query: 101 LVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLIN 160
           +++ G  P  L  N++IN       G C    +  A  L + MI  G  P+V T+  LI 
Sbjct: 175 VIAKGFTPTVLMFNLVIN-------GFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILIT 227

Query: 161 GFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMK 220
           G C+   +  A +L +KMV+G          N+ +YS +I+ LCK+G VD A ELF  M+
Sbjct: 228 GLCKANRVGEAQQLLEKMVTGG------CSPNVVTYSTVINGLCKQGQVDDAYELFQLME 281

Query: 221 GRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKIN 280
            R   P VV    LI G C A   EE   L+  M + G  P+++T+N +ID LCK  +++
Sbjct: 282 RRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVD 341

Query: 281 EANGLLELMIQRGLNP-DRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNIL 339
           EA  L + + + G++  +  TY++L  GY  +GR+  A  IF  +  KG    + +Y  L
Sbjct: 342 EAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSL 401

Query: 340 INGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNV 399
           I  YCK     E + L  ++ S G    V T + +L GLF+      A +LFD M     
Sbjct: 402 ILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAARGC 461

Query: 400 EPDLSTYNILIDG--------------------------------------LCKNNCVQE 421
             D   YN++++G                                      LC+     +
Sbjct: 462 TDDALIYNLVVEGMARASKHNKALAVLEQVIDKRDRKFNPSSSAVDALVESLCQVGRTDD 521

Query: 422 AVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIH 481
           A +L H +    F   +  +N L+ GL +  R D A ++F  +   G  P + T +++I 
Sbjct: 522 AKQLLHKMSERGFAAAVSSYNGLLSGLSRLQRWDEATQVFEAMVSAGPAPEISTVNVVIS 581

Query: 482 GLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNL 541
            LC   K++ A + +  M K GC P++ T NTL+ G+ ++ +     +LL +M E    L
Sbjct: 582 WLCSAAKVDDAYELVQRMSKLGCCPDIETCNTLIGGYCKSGRADLARKLLEEMTEA--GL 639

Query: 542 VPDDTTFSIV 551
            P+DTT  ++
Sbjct: 640 EPNDTTHDLL 649



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 134/453 (29%), Positives = 226/453 (49%), Gaps = 16/453 (3%)

Query: 108 PDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGN 167
           PD +T   L++        LC   +  EA  + + MIA G  PD +T+ TLI+G C+ G+
Sbjct: 76  PDVMTYTALVH-------ALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDGLCKFGS 128

Query: 168 LSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLC-KEGLVDKAKELFLEMKGRGINP 226
              A R+ + ++     N      +  ++  II  LC K   V+ A ++   +  +G  P
Sbjct: 129 EEQAFRVLEDVIQRGMGN------SDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTP 182

Query: 227 AVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLL 286
            V++   +I+GFC A + +    L   M++ G  PN+ TF ++I  LCK  ++ EA  LL
Sbjct: 183 TVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLL 242

Query: 287 ELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKI 346
           E M+  G +P+  TY+++++G C  G++D A E+F  M  + C   VV++NILI+G CK 
Sbjct: 243 EKMVTGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKA 302

Query: 347 LNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVE-PDLST 405
             +EEA  LY ++   G    +ITYN+L+ GL ++ Q   A +LF  +    V   +  T
Sbjct: 303 KRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVT 362

Query: 406 YNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLP 465
           Y+ L  G      + +A ++F ML    F   +  +  LI   CK  R     EL  ++ 
Sbjct: 363 YSTLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMA 422

Query: 466 QKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTS 525
            KG  P V T S ++ GL      E+A      M   GC  + + +N ++ G  + +K +
Sbjct: 423 SKGFPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHN 482

Query: 526 KVVELLHKMAEP-ERNLVPDDTTFSIVVDLLAK 557
           K + +L ++ +  +R   P  +    +V+ L +
Sbjct: 483 KALAVLEQVIDKRDRKFNPSSSAVDALVESLCQ 515



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 122/402 (30%), Positives = 204/402 (50%), Gaps = 40/402 (9%)

Query: 188 ISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEV 247
           I   N F+Y I+I      G +D A +L  EMK  G     VV TTL+ G C AG   E 
Sbjct: 4   ICMPNKFTYGILIRGFSSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGRVVEA 63

Query: 248 NGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDG 307
              F  M      P+++T+  ++  LCK GK +EA G+L  MI RG  PD  T+++L+DG
Sbjct: 64  LEHFRAMAK-DCAPDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDG 122

Query: 308 YCLVG------------------------------------RIDTAREIFLSMHSKGCKH 331
            C  G                                     ++ A ++   + +KG   
Sbjct: 123 LCKFGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTP 182

Query: 332 TVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLF 391
           TV+ +N++ING+CK  +++ A  L   +I  G    V T+  L++GL +A + G AQ+L 
Sbjct: 183 TVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLL 242

Query: 392 DEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKA 451
           ++M      P++ TY+ +I+GLCK   V +A +LF ++E       +   N LIDGLCKA
Sbjct: 243 EKMVTGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKA 302

Query: 452 GRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNG-CAPNVVT 510
            R++ A +L+H++ + G  P ++TY+ +I GLC+  ++++A      + ++G  A N VT
Sbjct: 303 KRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVT 362

Query: 511 FNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVV 552
           ++TL HG+    + +    +   +   ++   PD  T++ ++
Sbjct: 363 YSTLFHGYAALGRMADACRIFSMLV--DKGFSPDLATYTSLI 402



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 108/395 (27%), Positives = 181/395 (45%), Gaps = 23/395 (5%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CK G   +++A   F  M      P + + N+L   + K +  +     Y ++   G  P
Sbjct: 265 CKQG--QVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAP 322

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVR-PDVITYGTLINGFCRTGN 167
           D +T N LI+       GLC   ++ EA  LF+ +   GV   + +TY TL +G+   G 
Sbjct: 323 DIITYNSLID-------GLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGR 375

Query: 168 LSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPA 227
           ++ A R+   +V   +        ++ +Y+ +I   CK     +  EL  EM  +G  P 
Sbjct: 376 MADACRIFSMLVDKGF------SPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPR 429

Query: 228 VVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLE 287
           V   + ++ G     + E    LF  M   G   + L +N++++ + +  K N+A  +LE
Sbjct: 430 VNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHNKALAVLE 489

Query: 288 LMI---QRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYC 344
            +I    R  NP     ++L++  C VGR D A+++   M  +G    V SYN L++G  
Sbjct: 490 QVIDKRDRKFNPSSSAVDALVESLCQVGRTDDAKQLLHKMSERGFAAAVSSYNGLLSGLS 549

Query: 345 KILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLS 404
           ++   +EA  ++  ++S G    + T N ++S L  A +   A +L   M      PD+ 
Sbjct: 550 RLQRWDEATQVFEAMVSAGPAPEISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCPDIE 609

Query: 405 TYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIE 439
           T N LI G CK+     A KL    EM   E G+E
Sbjct: 610 TCNTLIGGYCKSGRADLARKLLE--EMT--EAGLE 640



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 80/286 (27%), Positives = 134/286 (46%), Gaps = 14/286 (4%)

Query: 56  LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNI 115
           + +A   F  +     SP ++++  L     K      V+    ++ S G  P   TL+ 
Sbjct: 376 MADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSA 435

Query: 116 LINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLH 175
           ++        GL   N  + A  LF +M A G   D + Y  ++ G  R    + AL + 
Sbjct: 436 VLG-------GLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHNKALAVL 488

Query: 176 KKMVSGDYENGLISKTNIFSYSI--IIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTT 233
           ++++  D  +    K N  S ++  +++SLC+ G  D AK+L  +M  RG   AV     
Sbjct: 489 EQVI--DKRD---RKFNPSSSAVDALVESLCQVGRTDDAKQLLHKMSERGFAAAVSSYNG 543

Query: 234 LIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRG 293
           L+ G      W+E   +F  M+  GP P + T NV+I  LC   K+++A  L++ M + G
Sbjct: 544 LLSGLSRLQRWDEATQVFEAMVSAGPAPEISTVNVVISWLCSAAKVDDAYELVQRMSKLG 603

Query: 294 LNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNIL 339
             PD  T N+L+ GYC  GR D AR++   M   G +    ++++L
Sbjct: 604 CCPDIETCNTLIGGYCKSGRADLARKLLEEMTEAGLEPNDTTHDLL 649



 Score = 50.1 bits (118), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 30/94 (31%), Positives = 43/94 (45%), Gaps = 3/94 (3%)

Query: 470 VPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVE 529
           +P   TY I+I G    G L+ A   L  M+ NG   N V   TLM G     +  + +E
Sbjct: 6   MPNKFTYGILIRGFSSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGRVVEALE 65

Query: 530 LLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
               MA   ++  PD  T++ +V  L K  K+ E
Sbjct: 66  HFRAMA---KDCAPDVMTYTALVHALCKAGKFDE 96


>gi|413922209|gb|AFW62141.1| hypothetical protein ZEAMMB73_911481 [Zea mays]
          Length = 700

 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 147/541 (27%), Positives = 265/541 (48%), Gaps = 22/541 (4%)

Query: 58  EARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL-VSIGLLP-DFLTLNI 115
           + R  FG +      P   ++N +  A       D  ++  R++  S G  P D  + N+
Sbjct: 140 DVRAAFGLLVAAGARPDTFAWNKVVQACVAAGDLDVALAMLRRMGRSEGAPPPDAFSYNV 199

Query: 116 LINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLH 175
           +I        GL    +  +A  +F  M+  GV P+ ITY T+I+G  + G+L    RL 
Sbjct: 200 VIA-------GLWRSGKGSDALKVFDEMVDMGVAPNRITYNTMIDGHVKGGDLEAGFRLR 252

Query: 176 KKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLI 235
            +M+     +G   K N+ +Y++++  LC+ G +D+ + L  EM    + P     + L 
Sbjct: 253 DQML----HDG--PKPNVVTYNVLLSGLCRTGRMDETRALMDEMASHSMLPDGFTYSILF 306

Query: 236 HGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLN 295
            G    G  + +  LF E L  G      T +++++ LCK GK+ +A  + E+++  GL 
Sbjct: 307 DGLTRTGESQTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAKQVFEMLVHTGLV 366

Query: 296 PDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSL 355
           P    YN+L++GYC V  +  A  IF  M S+  +   ++YN LING CK+  V +A  L
Sbjct: 367 PTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDL 426

Query: 356 YRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCK 415
             ++  +GV  +V T+NTL+     AGQ      +  +M+   ++ D+ ++  ++   CK
Sbjct: 427 VMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCK 486

Query: 416 NNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVT 475
           N  + EAV +   +         +++N +ID   ++G  + A  L  K+   G+  ++VT
Sbjct: 487 NGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQALLLVEKMKNSGVSASIVT 546

Query: 476 YSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMA 535
           Y++++ GLCR  ++++A + +  +   G  P+VV++NT++        T K +ELL +M 
Sbjct: 547 YNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMN 606

Query: 536 EPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKSSYRACLYVTIFQPSSL-GSMIGCTV 594
             +  + P   T   +V  LA   + H+   +    Y+  L+  +   SS+ G M+   V
Sbjct: 607 --KYGIRPTLRTCHTLVSALASAGRVHDMECL----YQQMLHKNVEPSSSIYGIMVDAYV 660

Query: 595 R 595
           R
Sbjct: 661 R 661



 Score =  218 bits (556), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 128/428 (29%), Positives = 216/428 (50%), Gaps = 11/428 (2%)

Query: 107 LPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTG 166
           LP   + N+L+         L    R  +    F  ++A G RPD   +  ++      G
Sbjct: 119 LPSLSSCNLLLE-------SLLFVGRHADVRAAFGLLVAAGARPDTFAWNKVVQACVAAG 171

Query: 167 NLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINP 226
           +L VAL + ++M  G  E       + FSY+++I  L + G    A ++F EM   G+ P
Sbjct: 172 DLDVALAMLRRM--GRSEGA--PPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVAP 227

Query: 227 AVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLL 286
             +   T+I G    G+ E    L  +ML  GP+PN++T+NV++  LC+ G+++E   L+
Sbjct: 228 NRITYNTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNVVTYNVLLSGLCRTGRMDETRALM 287

Query: 287 ELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKI 346
           + M    + PD FTY+ L DG    G   T   +F     KG      + +IL+NG CK 
Sbjct: 288 DEMASHSMLPDGFTYSILFDGLTRTGESQTMLSLFAESLKKGVMLGAYTCSILLNGLCKD 347

Query: 347 LNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTY 406
             V +A  ++  ++  G+  T + YNTL++G  Q      A  +F++MK  ++ PD  TY
Sbjct: 348 GKVAKAKQVFEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITY 407

Query: 407 NILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQ 466
           N LI+GLCK   V +A  L   +E +  +  +E FN LID    AG+L+  + +   + Q
Sbjct: 408 NALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQ 467

Query: 467 KGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSK 526
           KG+   V+++  ++   C+ GK+ +A   L  M     APN   +N+++  ++++  T +
Sbjct: 468 KGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQ 527

Query: 527 VVELLHKM 534
            + L+ KM
Sbjct: 528 ALLLVEKM 535



 Score =  207 bits (528), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 129/493 (26%), Positives = 236/493 (47%), Gaps = 15/493 (3%)

Query: 57  NEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNIL 116
           ++A   F  M  M  +P   ++N +     K    +A      +++  G  P+ +T N+L
Sbjct: 211 SDALKVFDEMVDMGVAPNRITYNTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNVVTYNVL 270

Query: 117 INCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHK 176
           ++       GLC   R+ E   L   M +  + PD  TY  L +G  RTG     L L  
Sbjct: 271 LS-------GLCRTGRMDETRALMDEMASHSMLPDGFTYSILFDGLTRTGESQTMLSLFA 323

Query: 177 KMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIH 236
           + +    + G++     ++ SI+++ LCK+G V KAK++F  +   G+ P  V+  TLI+
Sbjct: 324 ESL----KKGVM--LGAYTCSILLNGLCKDGKVAKAKQVFEMLVHTGLVPTTVIYNTLIN 377

Query: 237 GFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNP 296
           G+C   +      +F +M     RP+ +T+N +I+ LCK   + +A  L+  M + G++P
Sbjct: 378 GYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDP 437

Query: 297 DRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLY 356
              T+N+L+D Y   G+++    +   M  KG K  V+S+  ++  +CK   + EA+++ 
Sbjct: 438 SVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAIL 497

Query: 357 RQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKN 416
             +I   V      YN+++    ++G    A  L ++MK   V   + TYN+L+ GLC++
Sbjct: 498 DDMIYKDVAPNAQVYNSIIDAYIESGDTEQALLLVEKMKNSGVSASIVTYNLLLKGLCRS 557

Query: 417 NCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTY 476
           + + EA +L + L        +  +N +I   C  G  D A EL  ++ + G+ PT+ T 
Sbjct: 558 SQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTC 617

Query: 477 SIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAE 536
             ++  L   G++         M      P+   +  ++  +++    SKV  L  +M+ 
Sbjct: 618 HTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEMS- 676

Query: 537 PERNLVPDDTTFS 549
            E+ +  DDT  S
Sbjct: 677 -EKGIAFDDTKRS 688



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 112/429 (26%), Positives = 212/429 (49%), Gaps = 15/429 (3%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
           N  L   C++G   ++E R     M      P   ++++LF  + +      ++S + + 
Sbjct: 268 NVLLSGLCRTG--RMDETRALMDEMASHSMLPDGFTYSILFDGLTRTGESQTMLSLFAES 325

Query: 102 VSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLING 161
           +  G++    T +IL+N       GLC + ++ +A  +F+ ++  G+ P  + Y TLING
Sbjct: 326 LKKGVMLGAYTCSILLN-------GLCKDGKVAKAKQVFEMLVHTGLVPTTVIYNTLING 378

Query: 162 FCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKG 221
           +C+  +L  A  + ++M S         + +  +Y+ +I+ LCK  +V KA++L +EM+ 
Sbjct: 379 YCQVRDLRGAFCIFEQMKSRHI------RPDHITYNALINGLCKLEMVTKAEDLVMEMEK 432

Query: 222 RGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINE 281
            G++P+V    TLI  +  AG  E+   +  +M   G + ++++F  ++   CK GKI E
Sbjct: 433 SGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPE 492

Query: 282 ANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILIN 341
           A  +L+ MI + + P+   YNS++D Y   G  + A  +   M + G   ++V+YN+L+ 
Sbjct: 493 AVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQALLLVEKMKNSGVSASIVTYNLLLK 552

Query: 342 GYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEP 401
           G C+   ++EA  L   + + G+R  V++YNT++S     G    A +L  EM  Y + P
Sbjct: 553 GLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRP 612

Query: 402 DLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELF 461
            L T + L+  L     V +   L+  +     E    I+  ++D   +         L 
Sbjct: 613 TLRTCHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASLK 672

Query: 462 HKLPQKGLV 470
            ++ +KG+ 
Sbjct: 673 KEMSEKGIA 681



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 98/381 (25%), Positives = 166/381 (43%), Gaps = 74/381 (19%)

Query: 259 PRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDT-- 316
           P P+L + N++++ L   G+  +      L++  G  PD F +N ++      G +D   
Sbjct: 118 PLPSLSSCNLLLESLLFVGRHADVRAAFGLLVAAGARPDTFAWNKVVQACVAAGDLDVAL 177

Query: 317 -----------------------------------AREIFLSMHSKGCKHTVVSYNILIN 341
                                              A ++F  M   G     ++YN +I+
Sbjct: 178 AMLRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVAPNRITYNTMID 237

Query: 342 GYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEP 401
           G+ K  ++E    L  Q++ +G +  V+TYN LLSGL + G+    + L DEM  +++ P
Sbjct: 238 GHVKGGDLEAGFRLRDQMLHDGPKPNVVTYNVLLSGLCRTGRMDETRALMDEMASHSMLP 297

Query: 402 DLSTYNILID-----------------------------------GLCKNNCVQEAVKLF 426
           D  TY+IL D                                   GLCK+  V +A ++F
Sbjct: 298 DGFTYSILFDGLTRTGESQTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAKQVF 357

Query: 427 HMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRK 486
            ML          I+N LI+G C+   L  A+ +F ++  + + P  +TY+ +I+GLC+ 
Sbjct: 358 EMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKL 417

Query: 487 GKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDT 546
             + KA D ++ MEK+G  P+V TFNTL+  +    +  K   +L  M   ++ +  D  
Sbjct: 418 EMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQ--QKGIKSDVI 475

Query: 547 TFSIVVDLLAKDEKYHECSAV 567
           +F  VV    K+ K  E  A+
Sbjct: 476 SFGSVVKAFCKNGKIPEAVAI 496


>gi|449495714|ref|XP_004159923.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g39710-like [Cucumis sativus]
          Length = 749

 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 124/362 (34%), Positives = 206/362 (56%), Gaps = 3/362 (0%)

Query: 193 IFSYSIIIDSLCK-EGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
           + SY+ I+D++ + +  V  A+ +F EM   G++P V     LI GFC AGN E     F
Sbjct: 167 VLSYNAILDAVIRTKQSVKIAEGIFKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLXFF 226

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
            EM   G  PN++T+N +ID  CK  KI EA  LL LM  +GLNP+  +YN +++G C  
Sbjct: 227 GEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCRE 286

Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
           G++    EI   M  +      V++N LINGYC + N  +A+ L+ +++ NG+   V+TY
Sbjct: 287 GQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTY 346

Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
            TL++ + +AG    A +  D+M+   + P+  TY  LIDG  +   +++A ++   +  
Sbjct: 347 TTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVE 406

Query: 432 NKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEK 491
           N F   I  +N LI+G C  GR+++A  L  ++ ++G +P VV+YS +I G CR  +LEK
Sbjct: 407 NGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEK 466

Query: 492 ANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIV 551
           A    + M   G +P+V T+++L+ G  +  +  +V +L  +M      L PD+ T++ +
Sbjct: 467 AFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEML--SLGLPPDEVTYTSL 524

Query: 552 VD 553
           ++
Sbjct: 525 IN 526



 Score =  222 bits (565), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 158/574 (27%), Positives = 265/574 (46%), Gaps = 75/574 (13%)

Query: 53  IINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVIS-FYRKLVSIGLLPDFL 111
           I+NL ++   +G+M      P + S+N +  AV + +    +    ++++V  G+ P+  
Sbjct: 154 IVNLAKS---YGFM------PGVLSYNAILDAVIRTKQSVKIAEGIFKEMVESGVSPNVY 204

Query: 112 TLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVA 171
           T NILI       RG C    ++     F  M   G  P+V+TY T+I+ +C+   +  A
Sbjct: 205 TYNILI-------RGFCTAGNLEMGLXFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEA 257

Query: 172 LRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVC 231
            +L + M       GL    N+ SY+++I+ LC+EG + +  E+  EM  R   P  V  
Sbjct: 258 FKLLRLMAL----KGL--NPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTF 311

Query: 232 TTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQ 291
            TLI+G+C  GN+ +   L  EM+  G  PN++T+  +I+ +CK G +N A   L+ M  
Sbjct: 312 NTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRD 371

Query: 292 RGLNP---------DRF--------------------------TYNSLMDGYCLVGRIDT 316
           RGL+P         D F                          TYN+L++G+C++GR++ 
Sbjct: 372 RGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMED 431

Query: 317 AREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLS 376
           A  +   M  +G    VVSY+ +I+G+C+   +E+A  L  ++++ G+   V TY++L+ 
Sbjct: 432 ASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQ 491

Query: 377 GLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEF 436
           GL +  + G    LF EM    + PD  TY  LI+  C    + +A++L   +    F  
Sbjct: 492 GLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSP 551

Query: 437 GIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMI---------------H 481
            I  +N LI+G  K  R   A  L  KL  +  VP  +TY+ +I                
Sbjct: 552 DIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDNCNNLEFKSALALMK 611

Query: 482 GLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNL 541
           G C KG + +A+  L  M + G   N   +N ++HG  +     K   L  +M       
Sbjct: 612 GFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYKEMLHS--GF 669

Query: 542 VPDDTTFSIVVDLLAKDEKYHECSAVSKSSYRAC 575
            P   T   +   L  + K  E + +   + ++C
Sbjct: 670 APHSVTIMALAKSLYHEGKEVELNQLLDYTLKSC 703



 Score =  208 bits (529), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 137/459 (29%), Positives = 229/459 (49%), Gaps = 44/459 (9%)

Query: 131 NRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTG-NLSVALRLHKKMVSGDYENGLIS 189
           N I +A  +     ++G  P V++Y  +++   RT  ++ +A  + K+MV    E+G+  
Sbjct: 146 NLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIAEGIFKEMV----ESGV-- 199

Query: 190 KTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNG 249
             N+++Y+I+I   C  G ++     F EM+  G  P VV   T+I  +C      E   
Sbjct: 200 SPNVYTYNILIRGFCTAGNLEMGLXFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFK 259

Query: 250 LFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYC 309
           L   M   G  PNL+++NV+I+ LC+ G++ E + +LE M +R   PDR T+N+L++GYC
Sbjct: 260 LLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYC 319

Query: 310 LVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAM---------------- 353
            VG    A  +   M   G    VV+Y  LIN  CK  N+  AM                
Sbjct: 320 NVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGR 379

Query: 354 -------------------SLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEM 394
                               + ++++ NG   T+ITYN L++G    G+   A  L  EM
Sbjct: 380 TYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEM 439

Query: 395 KLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRL 454
                 PD+ +Y+ +I G C+N  +++A +L   +        +  ++ LI GLCK  RL
Sbjct: 440 IERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRL 499

Query: 455 DNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTL 514
               +LF ++   GL P  VTY+ +I+  C +G L+KA      M + G +P++VT+N L
Sbjct: 500 GEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVL 559

Query: 515 MHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
           ++GF + ++T +   LL K+   E   VP++ T++ ++D
Sbjct: 560 INGFNKQSRTKEAKRLLLKLLYEES--VPNEITYNTLID 596



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 84/289 (29%), Positives = 147/289 (50%), Gaps = 3/289 (1%)

Query: 266 FNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGR-IDTAREIFLSM 324
           F++++    +   IN+A  ++ L    G  P   +YN+++D      + +  A  IF  M
Sbjct: 135 FDLVVKSCARVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIAEGIFKEM 194

Query: 325 HSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQA 384
              G    V +YNILI G+C   N+E  +  + ++  NG    V+TYNT++    +  + 
Sbjct: 195 VESGVSPNVYTYNILIRGFCTAGNLEMGLXFFGEMERNGCLPNVVTYNTIIDAYCKLRKI 254

Query: 385 GYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCL 444
           G A KL   M L  + P+L +YN++I+GLC+   ++E  ++   +   ++      FN L
Sbjct: 255 GEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTL 314

Query: 445 IDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGC 504
           I+G C  G    A  L  ++ + GL P VVTY+ +I+ +C+ G L +A +FL  M   G 
Sbjct: 315 INGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGL 374

Query: 505 APNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
            PN  T+ TL+ GF Q     +  +++ +M   E    P   T++ +++
Sbjct: 375 HPNGRTYTTLIDGFSQQGFLKQAYQIMKEMV--ENGFTPTIITYNALIN 421


>gi|449460383|ref|XP_004147925.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like [Cucumis sativus]
 gi|449516585|ref|XP_004165327.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like [Cucumis sativus]
          Length = 701

 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 163/607 (26%), Positives = 287/607 (47%), Gaps = 89/607 (14%)

Query: 33  AVSSPETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYD 92
            + S  + LN F+  N         EA  FF Y      SP + ++N+L     K R ++
Sbjct: 113 GIRSFNSMLNAFIESN------QWREAELFFTYFQTAGMSPNLQTYNILIKISCKKRQFE 166

Query: 93  AVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDV 152
                   +   GL PD L+   LIN        L     + +A  LF  M   GV PDV
Sbjct: 167 KGKGLLTWMFENGLNPDILSYGTLIN-------ALAKSGNLLDAVELFDEMSVRGVNPDV 219

Query: 153 ITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKA 212
           + Y  LI+GF R G+   A  + K++++   E+ +    ++ +Y+I+I+ LCK G +D++
Sbjct: 220 MCYNILIDGFLRKGDFVKANEIWKRLLT---ESSVYP--SVETYNIMINGLCKLGKLDES 274

Query: 213 KELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDC 272
            E++  MK    +P +   +++IHG   AGN+     +F EM++ G  P++ T+N M+  
Sbjct: 275 MEMWNRMKKNEKSPDLFTFSSMIHGLSKAGNFNAAEKVFQEMIESGLSPDVRTYNAMLSG 334

Query: 273 LCKGGKINEA----------------------NGLL------------ELMIQRGLNPDR 298
           L + GK+N+                        GLL            +L+ +RGL  D 
Sbjct: 335 LFRTGKLNKCFELWNVMSKNNCCNIVSYNMLIQGLLDNKKVEQAICYWQLLHERGLKADS 394

Query: 299 FTYNSLMDGYCLVGRIDTAREIFLSMHSKG---------------CKHTVVS-------- 335
            TY  L++G C  G ++ A  I     ++G               CK  ++         
Sbjct: 395 TTYGLLINGLCKNGYLNKALRILEEAENEGADLDTFAYSSMVHGLCKKGMLEQAVELIHQ 454

Query: 336 ------------YNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQ 383
                       +N LINGY +   +EEA+S+ R++ S     TV++YNT+++GL +A +
Sbjct: 455 MKKNRRKLNSHVFNSLINGYVRAFKLEEAISVLREMKSKDCAPTVVSYNTIINGLCKAER 514

Query: 384 AGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNC 443
              A     EM    ++PD+ TY++LIDGLC+   V  A+ L+H     + +  +++ N 
Sbjct: 515 FSDAYLSLKEMLEEGLKPDMITYSLLIDGLCRGEKVDMALNLWHQCINKRLKPDLQMHNI 574

Query: 444 LIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNG 503
           +I GLC A ++D A E+F ++ Q   VP +VT++ ++ GL + G   +A      + + G
Sbjct: 575 IIHGLCTAQKVDVALEIFTQMRQVNCVPDLVTHNTIMEGLYKAGDCVEALKIWDRILEAG 634

Query: 504 CAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
             P+++++N    G     + S  +E L+     +R ++P+  T++++V  +  D+   E
Sbjct: 635 LQPDIISYNITFKGLCSCARVSDAIEFLYDAL--DRGILPNAPTWNVLVRAVVDDKPLME 692

Query: 564 CSAVSKS 570
            +  ++S
Sbjct: 693 YALNTES 699



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 141/490 (28%), Positives = 248/490 (50%), Gaps = 25/490 (5%)

Query: 84  AVAKNRHYDAVISFYRKLVSI-GLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKN 142
           A AK    D  ++ ++ +V I G  P   + N ++N F          N+ +EA   F  
Sbjct: 87  AYAKCSMPDQALNLFQNMVDIFGCNPGIRSFNSMLNAF-------IESNQWREAELFFTY 139

Query: 143 MIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDS 202
               G+ P++ TY  LI   C+           K +++  +ENGL    +I SY  +I++
Sbjct: 140 FQTAGMSPNLQTYNILIKISCKKRQFEKG----KGLLTWMFENGL--NPDILSYGTLINA 193

Query: 203 LCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEML-DLGPRP 261
           L K G +  A ELF EM  RG+NP V+    LI GF   G++ + N ++  +L +    P
Sbjct: 194 LAKSGNLLDAVELFDEMSVRGVNPDVMCYNILIDGFLRKGDFVKANEIWKRLLTESSVYP 253

Query: 262 NLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIF 321
           ++ T+N+MI+ LCK GK++E+  +   M +   +PD FT++S++ G    G  + A ++F
Sbjct: 254 SVETYNIMINGLCKLGKLDESMEMWNRMKKNEKSPDLFTFSSMIHGLSKAGNFNAAEKVF 313

Query: 322 LSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQA 381
             M   G    V +YN +++G  +   + +   L+  ++S      +++YN L+ GL   
Sbjct: 314 QEMIESGLSPDVRTYNAMLSGLFRTGKLNKCFELW-NVMSKNNCCNIVSYNMLIQGLLDN 372

Query: 382 GQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIF 441
            +   A   +  +    ++ D +TY +LI+GLCKN  + +A+++    E    +     +
Sbjct: 373 KKVEQAICYWQLLHERGLKADSTTYGLLINGLCKNGYLNKALRILEEAENEGADLDTFAY 432

Query: 442 NCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEK 501
           + ++ GLCK G L+ A EL H++ +         ++ +I+G  R  KLE+A   L  M+ 
Sbjct: 433 SSMVHGLCKKGMLEQAVELIHQMKKNRRKLNSHVFNSLINGYVRAFKLEEAISVLREMKS 492

Query: 502 NGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEK- 560
             CAP VV++NT+++G  +  + S     L +M   E  L PD  T+S+++D L + EK 
Sbjct: 493 KDCAPTVVSYNTIINGLCKAERFSDAYLSLKEML--EEGLKPDMITYSLLIDGLCRGEKV 550

Query: 561 ------YHEC 564
                 +H+C
Sbjct: 551 DMALNLWHQC 560



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 113/435 (25%), Positives = 198/435 (45%), Gaps = 73/435 (16%)

Query: 200 IDSLCKEGLVDKAKELFLEMKG-RGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLG 258
           I +  K  + D+A  LF  M    G NP +    ++++ F  +  W E    F      G
Sbjct: 85  IKAYAKCSMPDQALNLFQNMVDIFGCNPGIRSFNSMLNAFIESNQWREAELFFTYFQTAG 144

Query: 259 PRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAR 318
             PNL T+N++I   CK  +  +  GLL  M + GLNPD  +Y +L++     G +  A 
Sbjct: 145 MSPNLQTYNILIKISCKKRQFEKGKGLLTWMFENGLNPDILSYGTLINALAKSGNLLDAV 204

Query: 319 EIFLSMHSKGCKHTVVSYNILINGY----------------------------------- 343
           E+F  M  +G    V+ YNILI+G+                                   
Sbjct: 205 ELFDEMSVRGVNPDVMCYNILIDGFLRKGDFVKANEIWKRLLTESSVYPSVETYNIMING 264

Query: 344 -CKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPD 402
            CK+  ++E+M ++ ++  N     + T+++++ GL +AG    A+K+F EM    + PD
Sbjct: 265 LCKLGKLDESMEMWNRMKKNEKSPDLFTFSSMIHGLSKAGNFNAAEKVFQEMIESGLSPD 324

Query: 403 LSTYNILIDGL----------------CKNNC------------------VQEAVKLFHM 428
           + TYN ++ GL                 KNNC                  V++A+  + +
Sbjct: 325 VRTYNAMLSGLFRTGKLNKCFELWNVMSKNNCCNIVSYNMLIQGLLDNKKVEQAICYWQL 384

Query: 429 LEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGK 488
           L     +     +  LI+GLCK G L+ A  +  +   +G       YS M+HGLC+KG 
Sbjct: 385 LHERGLKADSTTYGLLINGLCKNGYLNKALRILEEAENEGADLDTFAYSSMVHGLCKKGM 444

Query: 489 LEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTF 548
           LE+A + +  M+KN    N   FN+L++G+++  K  + + +L +M    ++  P   ++
Sbjct: 445 LEQAVELIHQMKKNRRKLNSHVFNSLINGYVRAFKLEEAISVLREMK--SKDCAPTVVSY 502

Query: 549 SIVVDLLAKDEKYHE 563
           + +++ L K E++ +
Sbjct: 503 NTIINGLCKAERFSD 517


>gi|242041853|ref|XP_002468321.1| hypothetical protein SORBIDRAFT_01g043770 [Sorghum bicolor]
 gi|241922175|gb|EER95319.1| hypothetical protein SORBIDRAFT_01g043770 [Sorghum bicolor]
          Length = 794

 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 147/534 (27%), Positives = 252/534 (47%), Gaps = 37/534 (6%)

Query: 21  LSSLFKSPRQIAAVSSPETQLNEF------------------LHENCKSGIINLNEARYF 62
           LS+L +SP      +SP+  L+ F                  +H +C  G   L +A   
Sbjct: 180 LSALARSPS-----TSPQASLDVFRSLIALRLHPNHYTFNLLVHTHCSKG--TLADALST 232

Query: 63  FGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGN 122
              M     SP + ++N L  A  +        +   ++   G+ P   T N L++ +  
Sbjct: 233 LSTMQGFGLSPDVVTYNTLLKAHCRKGMLGEARTLLARMKKEGIAPTRATYNTLVSAYAR 292

Query: 123 KERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGD 182
                     IK+AT + + M AFG  PD+ TY  L  G C+ G +  A +L  +M    
Sbjct: 293 L-------GWIKQATNVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEM---- 341

Query: 183 YENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAG 242
            E+  I   ++ +Y+ ++D+  K      A  L  EM+ +G+  ++V    ++ G C  G
Sbjct: 342 -EHLSIVSPDVVTYNTLVDACFKYQRSSDALNLLEEMRDKGVKSSLVTHNIVVKGLCREG 400

Query: 243 NWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYN 302
             EE  G    M + G  P+++T+N +ID  CK   + +A  L++ M++ GL  D FT N
Sbjct: 401 QLEEALGRLKMMTEEGLAPDVITYNTLIDAYCKARNVAKAFVLMDEMVRSGLKMDTFTLN 460

Query: 303 SLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISN 362
           +L+   C   R + A E+  S   +G     VSY  ++  Y K    E A+ L+ ++   
Sbjct: 461 TLLYNLCKEKRYEEAEELLRSPPQRGFVPDEVSYGTVMAAYFKENKPEPALYLWDEMSKR 520

Query: 363 GVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEA 422
            +  ++ TYNTL+ GL   G+   A    +E+    + PD +TYNI+I   CK   +++A
Sbjct: 521 KLTPSIYTYNTLIKGLCTIGKLTEAIDKLNELMKKGLVPDDTTYNIIIHAYCKEGDLEKA 580

Query: 423 VKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHG 482
            +  + +  N F+  +   N L++GLC  G+L+ A +LF    +KG    V+TY+ +I  
Sbjct: 581 FQFHNKMLENYFKPDVVTCNTLMNGLCLHGKLEKAIKLFESWAEKGKKVDVITYNTLIQA 640

Query: 483 LCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAE 536
           LC+ G ++ A  F   ME  G  P+  T+N ++    +  ++ +   +LHK+ E
Sbjct: 641 LCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRSEEAQNMLHKLDE 694



 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 130/463 (28%), Positives = 223/463 (48%), Gaps = 16/463 (3%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
           N  L  +C+ G+  L EAR     M     +P  +++N L  A A+        +    +
Sbjct: 249 NTLLKAHCRKGM--LGEARTLLARMKKEGIAPTRATYNTLVSAYARLGWIKQATNVVEAM 306

Query: 102 VSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFG-VRPDVITYGTLIN 160
            + G  PD  T N+L         GLC   ++ EA  L   M     V PDV+TY TL++
Sbjct: 307 TAFGFEPDLWTYNVLAA-------GLCQAGKVDEAFKLKDEMEHLSIVSPDVVTYNTLVD 359

Query: 161 GFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMK 220
              +    S AL L ++M     + G+  K+++ +++I++  LC+EG +++A      M 
Sbjct: 360 ACFKYQRSSDALNLLEEM----RDKGV--KSSLVTHNIVVKGLCREGQLEEALGRLKMMT 413

Query: 221 GRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKIN 280
             G+ P V+   TLI  +C A N  +   L  EM+  G + +  T N ++  LCK  +  
Sbjct: 414 EEGLAPDVITYNTLIDAYCKARNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYE 473

Query: 281 EANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILI 340
           EA  LL    QRG  PD  +Y ++M  Y    + + A  ++  M  +    ++ +YN LI
Sbjct: 474 EAEELLRSPPQRGFVPDEVSYGTVMAAYFKENKPEPALYLWDEMSKRKLTPSIYTYNTLI 533

Query: 341 NGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVE 400
            G C I  + EA+    +++  G+     TYN ++    + G    A +  ++M     +
Sbjct: 534 KGLCTIGKLTEAIDKLNELMKKGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMLENYFK 593

Query: 401 PDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWEL 460
           PD+ T N L++GLC +  +++A+KLF        +  +  +N LI  LCK G +D A   
Sbjct: 594 PDVVTCNTLMNGLCLHGKLEKAIKLFESWAEKGKKVDVITYNTLIQALCKDGDVDTALHF 653

Query: 461 FHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNG 503
           F  +  +GL P   TY++++  L   G+ E+A + L  ++++G
Sbjct: 654 FADMEARGLQPDAFTYNVVLSALSEAGRSEEAQNMLHKLDESG 696



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 119/423 (28%), Positives = 200/423 (47%), Gaps = 29/423 (6%)

Query: 148 VRPDVITYGTLINGFCRTGNLS-----------VALRLHKKMVSGDYENGLISKTNIFSY 196
           VRP +     +++   R+ + S           +ALRLH                N +++
Sbjct: 169 VRPSLQAANAVLSALARSPSTSPQASLDVFRSLIALRLH---------------PNHYTF 213

Query: 197 SIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLD 256
           ++++ + C +G +  A      M+G G++P VV   TL+   C  G   E   L   M  
Sbjct: 214 NLLVHTHCSKGTLADALSTLSTMQGFGLSPDVVTYNTLLKAHCRKGMLGEARTLLARMKK 273

Query: 257 LGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDT 316
            G  P   T+N ++    + G I +A  ++E M   G  PD +TYN L  G C  G++D 
Sbjct: 274 EGIAPTRATYNTLVSAYARLGWIKQATNVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDE 333

Query: 317 AREIFLSM-HSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLL 375
           A ++   M H       VV+YN L++   K     +A++L  ++   GV+ +++T+N ++
Sbjct: 334 AFKLKDEMEHLSIVSPDVVTYNTLVDACFKYQRSSDALNLLEEMRDKGVKSSLVTHNIVV 393

Query: 376 SGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFE 435
            GL + GQ   A      M    + PD+ TYN LID  CK   V +A  L   +  +  +
Sbjct: 394 KGLCREGQLEEALGRLKMMTEEGLAPDVITYNTLIDAYCKARNVAKAFVLMDEMVRSGLK 453

Query: 436 FGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDF 495
                 N L+  LCK  R + A EL    PQ+G VP  V+Y  ++    ++ K E A   
Sbjct: 454 MDTFTLNTLLYNLCKEKRYEEAEELLRSPPQRGFVPDEVSYGTVMAAYFKENKPEPALYL 513

Query: 496 LLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLL 555
              M K    P++ T+NTL+ G     K ++ ++ L+++   ++ LVPDDTT++I++   
Sbjct: 514 WDEMSKRKLTPSIYTYNTLIKGLCTIGKLTEAIDKLNELM--KKGLVPDDTTYNIIIHAY 571

Query: 556 AKD 558
            K+
Sbjct: 572 CKE 574



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 100/353 (28%), Positives = 175/353 (49%), Gaps = 6/353 (1%)

Query: 212 AKELFLEMKGRG-INPAVVVCTTLIHGFCCAGNWEEVNGL--FIEMLDLGPRPNLLTFNV 268
           A +L    + RG + P++     ++     + +      L  F  ++ L   PN  TFN+
Sbjct: 156 AAQLLHSFRRRGHVRPSLQAANAVLSALARSPSTSPQASLDVFRSLIALRLHPNHYTFNL 215

Query: 269 MIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKG 328
           ++   C  G + +A   L  M   GL+PD  TYN+L+  +C  G +  AR +   M  +G
Sbjct: 216 LVHTHCSKGTLADALSTLSTMQGFGLSPDVVTYNTLLKAHCRKGMLGEARTLLARMKKEG 275

Query: 329 CKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQ 388
              T  +YN L++ Y ++  +++A ++   + + G    + TYN L +GL QAG+   A 
Sbjct: 276 IAPTRATYNTLVSAYARLGWIKQATNVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAF 335

Query: 389 KLFDEMK-LYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDG 447
           KL DEM+ L  V PD+ TYN L+D   K     +A+ L   +     +  +   N ++ G
Sbjct: 336 KLKDEMEHLSIVSPDVVTYNTLVDACFKYQRSSDALNLLEEMRDKGVKSSLVTHNIVVKG 395

Query: 448 LCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPN 507
           LC+ G+L+ A      + ++GL P V+TY+ +I   C+   + KA   +  M ++G   +
Sbjct: 396 LCREGQLEEALGRLKMMTEEGLAPDVITYNTLIDAYCKARNVAKAFVLMDEMVRSGLKMD 455

Query: 508 VVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEK 560
             T NTL++   +  +  +  ELL   + P+R  VPD+ ++  V+    K+ K
Sbjct: 456 TFTLNTLLYNLCKEKRYEEAEELLR--SPPQRGFVPDEVSYGTVMAAYFKENK 506



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 103/408 (25%), Positives = 177/408 (43%), Gaps = 51/408 (12%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           C+ G   L EA      MT    +P + ++N L  A  K R+         ++V  GL  
Sbjct: 397 CREG--QLEEALGRLKMMTEEGLAPDVITYNTLIDAYCKARNVAKAFVLMDEMVRSGLKM 454

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           D  TLN L+         LC E R +EA  L ++    G  PD ++YGT++  + +    
Sbjct: 455 DTFTLNTLL-------YNLCKEKRYEEAEELLRSPPQRGFVPDEVSYGTVMAAYFKENKP 507

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
             AL L  +M             +I++Y+ +I  LC  G + +A +   E+  +G+ P  
Sbjct: 508 EPALYLWDEMSKRKL------TPSIYTYNTLIKGLCTIGKLTEAIDKLNELMKKGLVPDD 561

Query: 229 VVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLEL 288
                +IH +C  G+ E+      +ML+   +P+++T N +++ LC  GK+ +A  L E 
Sbjct: 562 TTYNIIIHAYCKEGDLEKAFQFHNKMLENYFKPDVVTCNTLMNGLCLHGKLEKAIKLFES 621

Query: 289 MIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILN 348
             ++G   D  TYN+L+   C  G +DTA   F  M ++G +    +YN++++   +   
Sbjct: 622 WAEKGKKVDVITYNTLIQALCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGR 681

Query: 349 VEEAMSLYRQIISNG----------VRQTV--------------------------ITYN 372
            EEA ++  ++  +G          ++ +                            +YN
Sbjct: 682 SEEAQNMLHKLDESGKLSERFSYPLIKSSAEEVKTGKDPEVKSDCESGGNAKGGDQESYN 741

Query: 373 TLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQ 420
             +  L   GQ   A+ + DEM    +  D STY  L++GL K    Q
Sbjct: 742 KSVKELCVGGQLKEAKAVLDEMMQKGMSVDSSTYITLMEGLIKRQKRQ 789


>gi|255558280|ref|XP_002520167.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223540659|gb|EEF42222.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 604

 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 159/525 (30%), Positives = 260/525 (49%), Gaps = 16/525 (3%)

Query: 56  LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHY-DAVISFYRKLVSIGLLPDFLTLN 114
           LNEAR FF  + +   +    S NL    ++  R     V+  + +   +G+  +  + N
Sbjct: 55  LNEARKFFDKLLNYGVALSAGSCNLYLTCLSSKRDMLGMVLKVFSEFPQLGVCWNTESYN 114

Query: 115 ILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRL 174
           IL+N        L    +I+EA  L   M   G  PDV++Y T+I+G+C  G L   ++L
Sbjct: 115 ILMN-------SLFRLGKIREAHHLLMRMEFKGCIPDVVSYTTIIDGYCHVGELQKVVQL 167

Query: 175 HKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTL 234
            K+M       GL  K N+++YS II  LCK G V + +++  EM  RG+ P  V+ TTL
Sbjct: 168 VKEMQL----KGL--KPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVFPDHVIYTTL 221

Query: 235 IHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGL 294
           I GFC  GN +    LF EM      P+ + F+ +I  L   GK+ EA+ L   MI++G 
Sbjct: 222 IDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLFNEMIKKGF 281

Query: 295 NPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMS 354
            PD  TY +L+DGYC +G +  A  +   M   G    VV+Y  L +G CK   ++ A  
Sbjct: 282 EPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGELDTANE 341

Query: 355 LYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLC 414
           L  ++   G++  + TYNT+++GL +AG    A KL +EMK   + PD  TY  L+D   
Sbjct: 342 LLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTTLMDAYY 401

Query: 415 KNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVV 474
           K   + +A +L   +     +  +  FN L++GLC +G+L++   L   + +KG++P   
Sbjct: 402 KTGEMVKARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLEKGIMPNAA 461

Query: 475 TYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKM 534
           TY+ ++   C +  +  + +    M   G  P+  T+N L+ G  +     +   L  +M
Sbjct: 462 TYNSIMKQYCIRNNMRISTEIYRGMCAQGVVPDSNTYNILIKGHCKARNMKEAWFLHKEM 521

Query: 535 AEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKSSYRACLYVT 579
            E   NL    ++++ ++    K +K  E   + +   R  L  +
Sbjct: 522 VEKRFNLTA--SSYNALIKGFFKRKKLLEARQLFEEMRREGLVAS 564



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 134/464 (28%), Positives = 218/464 (46%), Gaps = 36/464 (7%)

Query: 56  LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNI 115
           + EA +    M      P + S+  +            V+   +++   GL P+  T + 
Sbjct: 126 IREAHHLLMRMEFKGCIPDVVSYTTIIDGYCHVGELQKVVQLVKEMQLKGLKPNLYTYSS 185

Query: 116 LINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLH 175
           +I         LC   ++ E   + + M+  GV PD + Y TLI+GFC+ GN   A +L 
Sbjct: 186 IILL-------LCKSGKVVEGEKVLREMMKRGVFPDHVIYTTLIDGFCKLGNTQAAYKLF 238

Query: 176 KKM------------------VSGDYE--------NGLISK---TNIFSYSIIIDSLCKE 206
            +M                  +SG  +        N +I K    +  +Y+ +ID  CK 
Sbjct: 239 SEMEAREIVPDSIAFSALICGLSGSGKVVEADKLFNEMIKKGFEPDEVTYTALIDGYCKL 298

Query: 207 GLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTF 266
           G + KA  L  +M   G+ P VV  T L  G C +G  +  N L  EM   G + N+ T+
Sbjct: 299 GEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGELDTANELLHEMCRKGLQLNISTY 358

Query: 267 NVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHS 326
           N +++ LCK G I +A  L+E M + GL+PD  TY +LMD Y   G +  ARE+   M  
Sbjct: 359 NTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTTLMDAYYKTGEMVKARELLREMLD 418

Query: 327 KGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGY 386
           +G + TVV++N+L+NG C    +E+   L + ++  G+     TYN+++           
Sbjct: 419 RGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLEKGIMPNAATYNSIMKQYCIRNNMRI 478

Query: 387 AQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLID 446
           + +++  M    V PD +TYNILI G CK   ++EA  L   +   +F      +N LI 
Sbjct: 479 STEIYRGMCAQGVVPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKRFNLTASSYNALIK 538

Query: 447 GLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLE 490
           G  K  +L  A +LF ++ ++GLV +   Y++ +     +G +E
Sbjct: 539 GFFKRKKLLEARQLFEEMRREGLVASAEIYNLFVDMNYEEGNME 582



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 126/422 (29%), Positives = 197/422 (46%), Gaps = 15/422 (3%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CKSG   + E       M      P    +  L     K  +  A    + ++ +  ++P
Sbjct: 191 CKSG--KVVEGEKVLREMMKRGVFPDHVIYTTLIDGFCKLGNTQAAYKLFSEMEAREIVP 248

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           D +  + LI C      GL    ++ EA  LF  MI  G  PD +TY  LI+G+C+ G +
Sbjct: 249 DSIAFSALI-C------GLSGSGKVVEADKLFNEMIKKGFEPDEVTYTALIDGYCKLGEM 301

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
             A  LH +MV    + GL    N+ +Y+ + D LCK G +D A EL  EM  +G+   +
Sbjct: 302 KKAFFLHNQMV----QIGLTP--NVVTYTALADGLCKSGELDTANELLHEMCRKGLQLNI 355

Query: 229 VVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLEL 288
               T+++G C AGN  +   L  EM + G  P+ +T+  ++D   K G++ +A  LL  
Sbjct: 356 STYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTTLMDAYYKTGEMVKARELLRE 415

Query: 289 MIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILN 348
           M+ RGL P   T+N LM+G C+ G+++    +   M  KG      +YN ++  YC   N
Sbjct: 416 MLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLEKGIMPNAATYNSIMKQYCIRNN 475

Query: 349 VEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNI 408
           +  +  +YR + + GV     TYN L+ G  +A     A  L  EM         S+YN 
Sbjct: 476 MRISTEIYRGMCAQGVVPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKRFNLTASSYNA 535

Query: 409 LIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKG 468
           LI G  K   + EA +LF  +         EI+N  +D   + G ++   EL  +  +K 
Sbjct: 536 LIKGFFKRKKLLEARQLFEEMRREGLVASAEIYNLFVDMNYEEGNMETTLELCDEAIEKC 595

Query: 469 LV 470
           L+
Sbjct: 596 LL 597



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 103/383 (26%), Positives = 171/383 (44%), Gaps = 80/383 (20%)

Query: 251 FIEML-----DLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMI--------------- 290
           F+E L     D G  P++  F+V    L + G +NEA    + ++               
Sbjct: 24  FVERLIYTYKDWGSDPHV--FDVFFQVLVEAGLLNEARKFFDKLLNYGVALSAGSCNLYL 81

Query: 291 ---------------------QRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGC 329
                                Q G+  +  +YN LM+    +G+I  A  + + M  KGC
Sbjct: 82  TCLSSKRDMLGMVLKVFSEFPQLGVCWNTESYNILMNSLFRLGKIREAHHLLMRMEFKGC 141

Query: 330 KHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQK 389
              VVSY  +I+GYC +  +++ + L +++   G++  + TY++++  L ++G+    +K
Sbjct: 142 IPDVVSYTTIIDGYCHVGELQKVVQLVKEMQLKGLKPNLYTYSSIILLLCKSGKVVEGEK 201

Query: 390 LFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNK---------------- 433
           +  EM    V PD   Y  LIDG CK    Q A KLF  +E  +                
Sbjct: 202 VLREMMKRGVFPDHVIYTTLIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGLS 261

Query: 434 -------------------FEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVV 474
                              FE     +  LIDG CK G +  A+ L +++ Q GL P VV
Sbjct: 262 GSGKVVEADKLFNEMIKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVV 321

Query: 475 TYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKM 534
           TY+ +  GLC+ G+L+ AN+ L  M + G   N+ T+NT+++G  +     + V+L+ +M
Sbjct: 322 TYTALADGLCKSGELDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEM 381

Query: 535 AEPERNLVPDDTTFSIVVDLLAK 557
            E    L PD  T++ ++D   K
Sbjct: 382 KEA--GLHPDTITYTTLMDAYYK 402



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 73/279 (26%), Positives = 121/279 (43%), Gaps = 31/279 (11%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
           NE LHE C+ G + LN                 IS++N +   + K  +    +    ++
Sbjct: 340 NELLHEMCRKG-LQLN-----------------ISTYNTIVNGLCKAGNILQAVKLMEEM 381

Query: 102 VSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLING 161
              GL PD +T   L++ +            + +A  L + M+  G++P V+T+  L+NG
Sbjct: 382 KEAGLHPDTITYTTLMDAYYKT-------GEMVKARELLREMLDRGLQPTVVTFNVLMNG 434

Query: 162 FCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKG 221
            C +G L    RL K M+    E G++   N  +Y+ I+   C    +  + E++  M  
Sbjct: 435 LCMSGKLEDGERLLKWML----EKGIMP--NAATYNSIMKQYCIRNNMRISTEIYRGMCA 488

Query: 222 RGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINE 281
           +G+ P       LI G C A N +E   L  EM++        ++N +I    K  K+ E
Sbjct: 489 QGVVPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKRFNLTASSYNALIKGFFKRKKLLE 548

Query: 282 ANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREI 320
           A  L E M + GL      YN  +D     G ++T  E+
Sbjct: 549 ARQLFEEMRREGLVASAEIYNLFVDMNYEEGNMETTLEL 587


>gi|242039015|ref|XP_002466902.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
 gi|241920756|gb|EER93900.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
          Length = 653

 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 137/462 (29%), Positives = 231/462 (50%), Gaps = 15/462 (3%)

Query: 75  ISSFNLLFGAVA-KNRHYDAVISFYRKL-VSIGLLPDFLTLNILINCFGNKERGLCVENR 132
           + + NL+  AV  +    D  +   R L  S G  PD ++ N ++       +GLC+  R
Sbjct: 188 VGNCNLVLNAVCDQGGSVDEALRLLRDLPTSFGCDPDVVSYNAVL-------KGLCMAKR 240

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
                 L + M+  G  P+V+T+ TLI   CR G      ++  +MV    ++G     +
Sbjct: 241 WGRVQDLMEEMVRVGCPPNVVTFNTLIGYLCRNGLFERVHQVLAQMV----DHG--CTPD 294

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
           I  Y+ ++D +CKEG ++ A E+   M   G+ P VV   T++ G C A  WE+   L  
Sbjct: 295 IRMYATVLDGVCKEGHLEVAHEILDRMPSYGLKPNVVCYNTVLKGLCSAERWEQAEELLA 354

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
           EM D     + +TFN+++D  C+ G +     LLE M++ G  PD  TY ++++G+C  G
Sbjct: 355 EMFDNDCPLDDVTFNILVDFFCQNGLVYRVIELLEQMLEHGCVPDVITYTTVINGFCKEG 414

Query: 313 RIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYN 372
            ID A  +  SM + GC+   +SY I++ G C      +A  L  Q+I  G     +T+N
Sbjct: 415 LIDEAVMLLKSMAACGCRPNTISYTIVLKGLCSAERWVDAEDLMSQMIEQGCSPNPVTFN 474

Query: 373 TLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMN 432
           T+++ L + G    A +L  +M L    PDL +Y+ +IDGL K     EA++L +++   
Sbjct: 475 TVINFLCKKGLVEQAIELLKQMLLNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNK 534

Query: 433 KFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKA 492
                  I++ +   L K GR++   ++F  +    +    V Y+ +I  LC++G  ++A
Sbjct: 535 GMSPNTIIYSSIASALSKEGRINRVIQMFDNIQDVTIRSDAVLYNAVISSLCKRGGTDRA 594

Query: 493 NDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKM 534
            +FL YM  +GC PN  T+  L+ G        +  E+L ++
Sbjct: 595 IEFLAYMVSSGCMPNESTYTILIRGLASEGFVKEAQEMLTEL 636



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 108/408 (26%), Positives = 196/408 (48%), Gaps = 16/408 (3%)

Query: 155 YGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKE 214
           Y  +++G+CR G L+ A RL   +             N ++Y  ++ +LC  G +  A  
Sbjct: 86  YNAMVSGYCRAGQLASARRLAASVPV---------PPNAYTYFPVVRALCARGRIADALS 136

Query: 215 LFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTF---NVMID 271
           +  EM+ RG  P   +   ++   C  G           + DL  R   L     N++++
Sbjct: 137 VLDEMRRRGCAPIPPMYHVILEAACSRGGGGGFRSAVRVLQDLHGRGCALDVGNCNLVLN 196

Query: 272 CLC-KGGKINEANGLL-ELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGC 329
            +C +GG ++EA  LL +L    G +PD  +YN+++ G C+  R    +++   M   GC
Sbjct: 197 AVCDQGGSVDEALRLLRDLPTSFGCDPDVVSYNAVLKGLCMAKRWGRVQDLMEEMVRVGC 256

Query: 330 KHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQK 389
              VV++N LI   C+    E    +  Q++ +G    +  Y T+L G+ + G    A +
Sbjct: 257 PPNVVTFNTLIGYLCRNGLFERVHQVLAQMVDHGCTPDIRMYATVLDGVCKEGHLEVAHE 316

Query: 390 LFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLC 449
           + D M  Y ++P++  YN ++ GLC     ++A +L   +  N        FN L+D  C
Sbjct: 317 ILDRMPSYGLKPNVVCYNTVLKGLCSAERWEQAEELLAEMFDNDCPLDDVTFNILVDFFC 376

Query: 450 KAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVV 509
           + G +    EL  ++ + G VP V+TY+ +I+G C++G +++A   L  M   GC PN +
Sbjct: 377 QNGLVYRVIELLEQMLEHGCVPDVITYTTVINGFCKEGLIDEAVMLLKSMAACGCRPNTI 436

Query: 510 TFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAK 557
           ++  ++ G     +     +L+ +M   E+   P+  TF+ V++ L K
Sbjct: 437 SYTIVLKGLCSAERWVDAEDLMSQMI--EQGCSPNPVTFNTVINFLCK 482



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 117/452 (25%), Positives = 205/452 (45%), Gaps = 46/452 (10%)

Query: 125 RGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCR---TGNLSVALRLHKKMVSG 181
           R LC   RI +A  +   M   G  P    Y  ++   C     G    A+R+ + +   
Sbjct: 123 RALCARGRIADALSVLDEMRRRGCAPIPPMYHVILEAACSRGGGGGFRSAVRVLQDL--- 179

Query: 182 DYENGLISKTNIFSYSIIIDSLCKEG-LVDKAKELFLEMKGR-GINPAVVVCTTLIHGFC 239
              +G     ++ + +++++++C +G  VD+A  L  ++    G +P VV    ++ G C
Sbjct: 180 ---HGRGCALDVGNCNLVLNAVCDQGGSVDEALRLLRDLPTSFGCDPDVVSYNAVLKGLC 236

Query: 240 CAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRF 299
            A  W  V  L  EM+ +G  PN++TFN +I  LC+ G     + +L  M+  G  PD  
Sbjct: 237 MAKRWGRVQDLMEEMVRVGCPPNVVTFNTLIGYLCRNGLFERVHQVLAQMVDHGCTPDIR 296

Query: 300 TYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQI 359
            Y +++DG C  G ++ A EI   M S G K  VV YN ++ G C     E+A  L  ++
Sbjct: 297 MYATVLDGVCKEGHLEVAHEILDRMPSYGLKPNVVCYNTVLKGLCSAERWEQAEELLAEM 356

Query: 360 ISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCV 419
             N      +T+N L+    Q G      +L ++M  +   PD+ TY  +I+G CK   +
Sbjct: 357 FDNDCPLDDVTFNILVDFFCQNGLVYRVIELLEQMLEHGCVPDVITYTTVINGFCKEGLI 416

Query: 420 QEAVKLFHMLEM-----NKFEFGIEI------------------------------FNCL 444
            EAV L   +       N   + I +                              FN +
Sbjct: 417 DEAVMLLKSMAACGCRPNTISYTIVLKGLCSAERWVDAEDLMSQMIEQGCSPNPVTFNTV 476

Query: 445 IDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGC 504
           I+ LCK G ++ A EL  ++   G  P +++YS +I GL + GK ++A + L  M   G 
Sbjct: 477 INFLCKKGLVEQAIELLKQMLLNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGM 536

Query: 505 APNVVTFNTLMHGFLQNNKTSKVVELLHKMAE 536
           +PN + ++++     +  + ++V+++   + +
Sbjct: 537 SPNTIIYSSIASALSKEGRINRVIQMFDNIQD 568



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 74/298 (24%), Positives = 135/298 (45%), Gaps = 10/298 (3%)

Query: 266 FNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMH 325
           +N M+   C+ G++  A     L     + P+ +TY  ++   C  GRI  A  +   M 
Sbjct: 86  YNAMVSGYCRAGQLASAR---RLAASVPVPPNAYTYFPVVRALCARGRIADALSVLDEMR 142

Query: 326 SKGCKHTVVSYNILINGYCK---ILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLF-QA 381
            +GC      Y++++   C          A+ + + +   G    V   N +L+ +  Q 
Sbjct: 143 RRGCAPIPPMYHVILEAACSRGGGGGFRSAVRVLQDLHGRGCALDVGNCNLVLNAVCDQG 202

Query: 382 GQAGYAQKLFDEMKL-YNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEI 440
           G    A +L  ++   +  +PD+ +YN ++ GLC          L   +        +  
Sbjct: 203 GSVDEALRLLRDLPTSFGCDPDVVSYNAVLKGLCMAKRWGRVQDLMEEMVRVGCPPNVVT 262

Query: 441 FNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYME 500
           FN LI  LC+ G  +   ++  ++   G  P +  Y+ ++ G+C++G LE A++ L  M 
Sbjct: 263 FNTLIGYLCRNGLFERVHQVLAQMVDHGCTPDIRMYATVLDGVCKEGHLEVAHEILDRMP 322

Query: 501 KNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKD 558
             G  PNVV +NT++ G     +  +  ELL +M + +  L  DD TF+I+VD   ++
Sbjct: 323 SYGLKPNVVCYNTVLKGLCSAERWEQAEELLAEMFDNDCPL--DDVTFNILVDFFCQN 378



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 46/201 (22%), Positives = 82/201 (40%), Gaps = 13/201 (6%)

Query: 58  EARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILI 117
           +A      M     SP   +FN +   + K    +  I   ++++  G  PD ++ + +I
Sbjct: 453 DAEDLMSQMIEQGCSPNPVTFNTVINFLCKKGLVEQAIELLKQMLLNGCSPDLISYSTVI 512

Query: 118 NCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKK 177
           +       GL    +  EA  L   M+  G+ P+ I Y ++ +   + G      R+++ 
Sbjct: 513 D-------GLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSKEG------RINRV 559

Query: 178 MVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHG 237
           +   D    +  +++   Y+ +I SLCK G  D+A E    M   G  P     T LI G
Sbjct: 560 IQMFDNIQDVTIRSDAVLYNAVISSLCKRGGTDRAIEFLAYMVSSGCMPNESTYTILIRG 619

Query: 238 FCCAGNWEEVNGLFIEMLDLG 258
               G  +E   +  E+   G
Sbjct: 620 LASEGFVKEAQEMLTELCSKG 640


>gi|359475386|ref|XP_003631674.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Vitis vinifera]
          Length = 762

 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 119/363 (32%), Positives = 209/363 (57%), Gaps = 4/363 (1%)

Query: 193 IFSYSIIIDSLCK-EGLVD-KAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGL 250
           + SY+ ++D++ +  G V   A+E++ EM    ++P V     LI GFC  G  ++  G 
Sbjct: 177 VLSYNSVLDAIVRSRGSVKLSAEEVYREMIRSRVSPNVYTYNILIRGFCSVGELQKGLGC 236

Query: 251 FIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCL 310
           F EM   G  PN++T+N +ID  CK G+I+EA GLL+ M  +G+ P+  +YN +++G C 
Sbjct: 237 FGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCR 296

Query: 311 VGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVIT 370
            G +  A EI   M  KG     V+YN L+NGYCK  N  +A+ ++ +++ NGV  +V+T
Sbjct: 297 EGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVT 356

Query: 371 YNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLE 430
           Y  L++ + +A     A + FD+M++  + P+  TY  LIDG  +   + EA ++ + + 
Sbjct: 357 YTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMT 416

Query: 431 MNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLE 490
            + F   +  +N  I G C   R++ A  +  ++ +KGL P VV+YS +I G CRKG+L+
Sbjct: 417 ESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELD 476

Query: 491 KANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSI 550
           +A      M + G +P+ VT+++L+ G  +  + ++  +L  +M   +  L PD+ T++ 
Sbjct: 477 RAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEML--DMGLPPDEFTYTT 534

Query: 551 VVD 553
           +++
Sbjct: 535 LIN 537



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 133/436 (30%), Positives = 220/436 (50%), Gaps = 10/436 (2%)

Query: 131 NRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRT-GNLSV-ALRLHKKMVSGDYENGLI 188
           N I +A        + G  P V++Y ++++   R+ G++ + A  ++++M+         
Sbjct: 156 NMIDQAVNTINLAKSSGFMPGVLSYNSVLDAIVRSRGSVKLSAEEVYREMIRSRV----- 210

Query: 189 SKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVN 248
              N+++Y+I+I   C  G + K    F EM+  G  P VV   TLI  +C  G  +E  
Sbjct: 211 -SPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAF 269

Query: 249 GLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGY 308
           GL   M   G +PNL+++NV+I+ LC+ G + EA  +LE M  +G  PD  TYN+L++GY
Sbjct: 270 GLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGY 329

Query: 309 CLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTV 368
           C  G    A  I   M   G   +VV+Y  LIN  CK  N+  AM  + Q+   G+R   
Sbjct: 330 CKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNE 389

Query: 369 ITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHM 428
            TY TL+ G  + G    A ++ +EM      P + TYN  I G C    ++EA+ +   
Sbjct: 390 RTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQE 449

Query: 429 LEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGK 488
           +        +  ++ +I G C+ G LD A+++  ++ +KG+ P  VTYS +I GLC   +
Sbjct: 450 MVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRR 509

Query: 489 LEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTF 548
           L +A D    M   G  P+  T+ TL++ +      +K + L  +M    +  +PD  T+
Sbjct: 510 LTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMI--HKGFLPDAVTY 567

Query: 549 SIVVDLLAKDEKYHEC 564
           S++++ L K  +  E 
Sbjct: 568 SVLINGLNKQARTREA 583



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 152/548 (27%), Positives = 252/548 (45%), Gaps = 53/548 (9%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVIS--FYRKLVSIGLLPDFLTLNILIN------------ 118
           P + S+N +  A+ ++R    + +   YR+++   + P+  T NILI             
Sbjct: 175 PGVLSYNSVLDAIVRSRGSVKLSAEEVYREMIRSRVSPNVYTYNILIRGFCSVGELQKGL 234

Query: 119 -CFGNKERGLCVEN---------------RIKEATWLFKNMIAFGVRPDVITYGTLINGF 162
            CFG  ER  C+ N               RI EA  L K+M + G++P++I+Y  +ING 
Sbjct: 235 GCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGL 294

Query: 163 CRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGR 222
           CR G++  A  + ++M    +        +  +Y+ +++  CKEG   +A  +  EM   
Sbjct: 295 CREGSMKEAWEILEEMGYKGF------TPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRN 348

Query: 223 GINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEA 282
           G++P+VV  T LI+  C A N       F +M   G RPN  T+  +ID   + G +NEA
Sbjct: 349 GVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEA 408

Query: 283 NGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILING 342
             +L  M + G +P   TYN+ + G+C++ R++ A  +   M  KG    VVSY+ +I+G
Sbjct: 409 YRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISG 468

Query: 343 YCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPD 402
           +C+   ++ A  + ++++  GV    +TY++L+ GL +  +   A  L  EM    + PD
Sbjct: 469 FCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPD 528

Query: 403 LSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFH 462
             TY  LI+  C    + +A+ L   +    F      ++ LI+GL K  R   A  L  
Sbjct: 529 EFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLF 588

Query: 463 KLPQKGLVPTVVTYSIMIH---------------GLCRKGKLEKANDFLLYMEKNGCAPN 507
           KL  +  VP+ VTY  +I                G C KG + +A+     M +    P 
Sbjct: 589 KLIYEESVPSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPG 648

Query: 508 VVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAV 567
              +N ++HG  +     K   L  +M       VP   T   ++  L K+    E S V
Sbjct: 649 EAVYNVIIHGHCRGGNLPKAFNLYKEMIHS--GFVPHTVTVITLIKALFKEGMNEEMSEV 706

Query: 568 SKSSYRAC 575
              + R+C
Sbjct: 707 IGDTLRSC 714



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 130/225 (57%), Gaps = 6/225 (2%)

Query: 336 YNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAG--YAQKLFDE 393
           +++++  Y  +  +++A++      S+G    V++YN++L  + ++  +    A++++ E
Sbjct: 145 FDLMVKSYSHLNMIDQAVNTINLAKSSGFMPGVLSYNSVLDAIVRSRGSVKLSAEEVYRE 204

Query: 394 MKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGR 453
           M    V P++ TYNILI G C    +Q+ +  F  +E N     +  +N LID  CK GR
Sbjct: 205 MIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGR 264

Query: 454 LDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNT 513
           +D A+ L   +  KG+ P +++Y+++I+GLCR+G +++A + L  M   G  P+ VT+NT
Sbjct: 265 IDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNT 324

Query: 514 LMHGFLQNNKTSKVVELLHKMAEPERNLV-PDDTTFSIVVDLLAK 557
           L++G+ +     + + ++H  AE  RN V P   T++ +++ + K
Sbjct: 325 LLNGYCKEGNFHQAL-VIH--AEMVRNGVSPSVVTYTALINSMCK 366


>gi|414864980|tpg|DAA43537.1| TPA: hypothetical protein ZEAMMB73_764503 [Zea mays]
          Length = 649

 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 142/505 (28%), Positives = 255/505 (50%), Gaps = 17/505 (3%)

Query: 41  LNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRK 100
           LN  +H  CK+  +  + A      M      P + + N+L  A  +    DA I+    
Sbjct: 160 LNIMVHSYCKT--LEFDGADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIALVDS 217

Query: 101 LVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLIN 160
           + + GL P  +T N ++       +GLC   R  +A  +F+ M    V PDV ++  LI 
Sbjct: 218 MANRGLKPGIVTYNSVL-------KGLCKHRRFDKAKEVFRTMDQCSVAPDVRSFNILIG 270

Query: 161 GFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMK 220
           GFCR G +  A++ +K+M     ++  ++  ++ S+S +I    + G +D A     EMK
Sbjct: 271 GFCRVGEVKEAVKFYKEM-----QHRYVT-PDVVSFSCLIGLFSRRGEMDHAGAYLREMK 324

Query: 221 GRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKIN 280
           G G+ P  V+ T +I GFC AG+  E   +  EM+  G  P+++T+N +++ LCK  ++ 
Sbjct: 325 GLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLL 384

Query: 281 EANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILI 340
           +A  LL  M +RG+ PD  T+ +L+ GYC  G  + A ++F ++  +  +  VV+YN LI
Sbjct: 385 DAEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNSLI 444

Query: 341 NGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVE 400
           +G C+  ++ +A  L+  + +  +    ITY+ L+    + GQ   A    DEM      
Sbjct: 445 DGMCRKGDLAKANELWDDMHAREILPNHITYSILIDSHCEKGQVEDAFGFLDEMVKKGNL 504

Query: 401 PDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWEL 460
           P++ TYN +I G C++  V++  +    +  +     +  FN LI G  K   +  A+ +
Sbjct: 505 PNIRTYNSIIKGYCRSGNVKKGQQFLQKMRQDNVFPDLITFNTLIHGYIKEENMHGAFNV 564

Query: 461 FHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQ 520
           F+ + ++ + P  VTY+++I+G   +G ++ A      M  +G  P+  T+ +L++G + 
Sbjct: 565 FNIMEKEMVRPDAVTYNMIINGFSEQGNMQDAGRVFKGMGDSGIEPDRYTYMSLINGHVT 624

Query: 521 NNKTSKVVELLHKMAEPERNLVPDD 545
              + +  +L  +M    R   PDD
Sbjct: 625 AGNSKQAFQLHDEMI--HRGFAPDD 647



 Score =  208 bits (530), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 121/413 (29%), Positives = 214/413 (51%), Gaps = 16/413 (3%)

Query: 154 TYGTLINGFCRT----GNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLV 209
           T   +++ +C+T    G  +V   + K+ V  D          + +++++ID+  + G V
Sbjct: 159 TLNIMVHSYCKTLEFDGADTVISEMEKRCVFPD----------VVTHNVLIDARFRAGDV 208

Query: 210 DKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVM 269
           D A  L   M  RG+ P +V   +++ G C    +++   +F  M      P++ +FN++
Sbjct: 209 DAAIALVDSMANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQCSVAPDVRSFNIL 268

Query: 270 IDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGC 329
           I   C+ G++ EA    + M  R + PD  +++ L+  +   G +D A      M   G 
Sbjct: 269 IGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLREMKGLGL 328

Query: 330 KHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQK 389
               V Y ++I G+C+  ++ EA+ +  +++  G    V+TYNTLL+GL +  +   A+K
Sbjct: 329 VPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDAEK 388

Query: 390 LFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLC 449
           L +EM+   V PDL T+  LI G C+    + A++LF  L   +    +  +N LIDG+C
Sbjct: 389 LLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNSLIDGMC 448

Query: 450 KAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVV 509
           + G L  A EL+  +  + ++P  +TYSI+I   C KG++E A  FL  M K G  PN+ 
Sbjct: 449 RKGDLAKANELWDDMHAREILPNHITYSILIDSHCEKGQVEDAFGFLDEMVKKGNLPNIR 508

Query: 510 TFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYH 562
           T+N+++ G+ ++    K  + L KM +   N+ PD  TF+ ++    K+E  H
Sbjct: 509 TYNSIIKGYCRSGNVKKGQQFLQKMRQD--NVFPDLITFNTLIHGYIKEENMH 559



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 84/334 (25%), Positives = 149/334 (44%), Gaps = 37/334 (11%)

Query: 254 MLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGR 313
           +L   P P    F+++I    +  K  EA     L++   +       N+L+      G 
Sbjct: 78  LLASSPTPQPQVFDLLIRTYTQSRKPREAFEAFRLLLDHRVPVPASASNALLAVLSRAGW 137

Query: 314 IDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNT 373
              A+E +  + S   +    + NI+++ YCK L  + A ++  ++    V   V+T+N 
Sbjct: 138 PHLAQEAYRLVLSSDSEVNAYTLNIMVHSYCKTLEFDGADTVISEMEKRCVFPDVVTHNV 197

Query: 374 LLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNK 433
           L+   F+AG    A  L D M    ++P + TYN ++ GLCK+    +A ++F  ++   
Sbjct: 198 LIDARFRAGDVDAAIALVDSMANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQCS 257

Query: 434 FEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQK-------------------------- 467
               +  FN LI G C+ G +  A + + ++  +                          
Sbjct: 258 VAPDVRSFNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAG 317

Query: 468 ---------GLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGF 518
                    GLVP  V Y+++I G CR G + +A      M   GC P+VVT+NTL++G 
Sbjct: 318 AYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGL 377

Query: 519 LQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVV 552
            + ++     +LL++M   ER + PD  TF+ ++
Sbjct: 378 CKQHRLLDAEKLLNEME--ERGVTPDLCTFTTLI 409


>gi|449438681|ref|XP_004137116.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Cucumis sativus]
          Length = 749

 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 124/362 (34%), Positives = 206/362 (56%), Gaps = 3/362 (0%)

Query: 193 IFSYSIIIDSLCK-EGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
           + SY+ I+D++ + +  V  A+ +F EM   G++P V     LI GFC AGN E     F
Sbjct: 167 VLSYNAILDAVIRTKQSVKIAEGIFKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLFFF 226

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
            EM   G  PN++T+N +ID  CK  KI EA  LL LM  +GLNP+  +YN +++G C  
Sbjct: 227 GEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCRE 286

Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
           G++    EI   M  +      V++N LINGYC + N  +A+ L+ +++ NG+   V+TY
Sbjct: 287 GQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTY 346

Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
            TL++ + +AG    A +  D+M+   + P+  TY  LIDG  +   +++A ++   +  
Sbjct: 347 TTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVE 406

Query: 432 NKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEK 491
           N F   I  +N LI+G C  GR+++A  L  ++ ++G +P VV+YS +I G CR  +LEK
Sbjct: 407 NGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEK 466

Query: 492 ANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIV 551
           A    + M   G +P+V T+++L+ G  +  +  +V +L  +M      L PD+ T++ +
Sbjct: 467 AFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEML--SLGLPPDEVTYTSL 524

Query: 552 VD 553
           ++
Sbjct: 525 IN 526



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 158/574 (27%), Positives = 266/574 (46%), Gaps = 75/574 (13%)

Query: 53  IINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVIS-FYRKLVSIGLLPDFL 111
           I+NL ++   +G+M      P + S+N +  AV + +    +    ++++V  G+ P+  
Sbjct: 154 IVNLAKS---YGFM------PGVLSYNAILDAVIRTKQSVKIAEGIFKEMVESGVSPNVY 204

Query: 112 TLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVA 171
           T NILI       RG C    ++   + F  M   G  P+V+TY T+I+ +C+   +  A
Sbjct: 205 TYNILI-------RGFCTAGNLEMGLFFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEA 257

Query: 172 LRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVC 231
            +L + M       GL    N+ SY+++I+ LC+EG + +  E+  EM  R   P  V  
Sbjct: 258 FKLLRLMAL----KGL--NPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTF 311

Query: 232 TTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQ 291
            TLI+G+C  GN+ +   L  EM+  G  PN++T+  +I+ +CK G +N A   L+ M  
Sbjct: 312 NTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRD 371

Query: 292 RGLNP---------DRF--------------------------TYNSLMDGYCLVGRIDT 316
           RGL+P         D F                          TYN+L++G+C++GR++ 
Sbjct: 372 RGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMED 431

Query: 317 AREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLS 376
           A  +   M  +G    VVSY+ +I+G+C+   +E+A  L  ++++ G+   V TY++L+ 
Sbjct: 432 ASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQ 491

Query: 377 GLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEF 436
           GL +  + G    LF EM    + PD  TY  LI+  C    + +A++L   +    F  
Sbjct: 492 GLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSP 551

Query: 437 GIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMI---------------H 481
            I  +N LI+G  K  R   A  L  KL  +  VP  +TY+ +I                
Sbjct: 552 DIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDNCNNLEFKSALALMK 611

Query: 482 GLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNL 541
           G C KG + +A+  L  M + G   N   +N ++HG  +     K   L  +M       
Sbjct: 612 GFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYKEMLHS--GF 669

Query: 542 VPDDTTFSIVVDLLAKDEKYHECSAVSKSSYRAC 575
            P   T   +   L  + K  E + +   + ++C
Sbjct: 670 APHSVTIMALAKSLYHEGKEVELNQLLDYTLKSC 703



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 137/459 (29%), Positives = 229/459 (49%), Gaps = 44/459 (9%)

Query: 131 NRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTG-NLSVALRLHKKMVSGDYENGLIS 189
           N I +A  +     ++G  P V++Y  +++   RT  ++ +A  + K+MV    E+G+  
Sbjct: 146 NLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIAEGIFKEMV----ESGV-- 199

Query: 190 KTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNG 249
             N+++Y+I+I   C  G ++     F EM+  G  P VV   T+I  +C      E   
Sbjct: 200 SPNVYTYNILIRGFCTAGNLEMGLFFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFK 259

Query: 250 LFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYC 309
           L   M   G  PNL+++NV+I+ LC+ G++ E + +LE M +R   PDR T+N+L++GYC
Sbjct: 260 LLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYC 319

Query: 310 LVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAM---------------- 353
            VG    A  +   M   G    VV+Y  LIN  CK  N+  AM                
Sbjct: 320 NVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGR 379

Query: 354 -------------------SLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEM 394
                               + ++++ NG   T+ITYN L++G    G+   A  L  EM
Sbjct: 380 TYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEM 439

Query: 395 KLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRL 454
                 PD+ +Y+ +I G C+N  +++A +L   +        +  ++ LI GLCK  RL
Sbjct: 440 IERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRL 499

Query: 455 DNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTL 514
               +LF ++   GL P  VTY+ +I+  C +G L+KA      M + G +P++VT+N L
Sbjct: 500 GEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVL 559

Query: 515 MHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
           ++GF + ++T +   LL K+   E   VP++ T++ ++D
Sbjct: 560 INGFNKQSRTKEAKRLLLKLLYEES--VPNEITYNTLID 596



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 84/289 (29%), Positives = 147/289 (50%), Gaps = 3/289 (1%)

Query: 266 FNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGR-IDTAREIFLSM 324
           F++++    +   IN+A  ++ L    G  P   +YN+++D      + +  A  IF  M
Sbjct: 135 FDLVVKSCARVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIAEGIFKEM 194

Query: 325 HSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQA 384
              G    V +YNILI G+C   N+E  +  + ++  NG    V+TYNT++    +  + 
Sbjct: 195 VESGVSPNVYTYNILIRGFCTAGNLEMGLFFFGEMERNGCLPNVVTYNTIIDAYCKLRKI 254

Query: 385 GYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCL 444
           G A KL   M L  + P+L +YN++I+GLC+   ++E  ++   +   ++      FN L
Sbjct: 255 GEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTL 314

Query: 445 IDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGC 504
           I+G C  G    A  L  ++ + GL P VVTY+ +I+ +C+ G L +A +FL  M   G 
Sbjct: 315 INGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGL 374

Query: 505 APNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
            PN  T+ TL+ GF Q     +  +++ +M   E    P   T++ +++
Sbjct: 375 HPNGRTYTTLIDGFSQQGFLKQAYQIMKEMV--ENGFTPTIITYNALIN 421


>gi|357110839|ref|XP_003557223.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Brachypodium distachyon]
          Length = 897

 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 151/544 (27%), Positives = 249/544 (45%), Gaps = 52/544 (9%)

Query: 44  FLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVS 103
           FL  +CK+   + + A+  F  M     +    ++N++   + ++   +    F  ++V 
Sbjct: 251 FLEAHCKAR--DFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAFGFKEEMVD 308

Query: 104 IGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFC 163
            GL PD  T   L+N       GLC   R+KEA  L   M   G++P+V+ Y TL++GF 
Sbjct: 309 YGLSPDAFTYGALMN-------GLCKGGRLKEAKALLDEMSCSGLKPNVVVYATLVDGFM 361

Query: 164 RTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRG 223
           + G  + A  +  +M+S   +       N   Y  +I  LCK G + +A +L  EM   G
Sbjct: 362 KEGKAAEAFDILNEMISAGVQ------PNKIMYDNLIRGLCKIGQLGRASKLLNEMIKVG 415

Query: 224 INPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEAN 283
             P       L+ G     + +    L  EM + G  PN  T+ +MI+ LC+ G+  EA 
Sbjct: 416 HRPDTFTYHPLMQGHFQHYDKDGAFELLNEMRNSGILPNAYTYGIMINGLCQNGESKEAG 475

Query: 284 GLLELMIQRGLNP-----------------------------------DRFTYNSLMDGY 308
            LLE MI  GL P                                   D F YNSL+ G 
Sbjct: 476 NLLEEMISEGLKPNAFMYAPLIIGHSKEGHISLACESLENMTKANVLPDLFCYNSLIKGL 535

Query: 309 CLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTV 368
             VGRI+ A E +  +  +G      +Y+ LI+GYCK  N+E+A  L +Q++++G++   
Sbjct: 536 STVGRIEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTRNLEKADQLLQQMLNSGLKPNA 595

Query: 369 ITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHM 428
            TY  LL G F++        +   M     +PD   Y I+I  L ++  ++ A  +   
Sbjct: 596 DTYTDLLEGYFKSNDHEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTE 655

Query: 429 LEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGK 488
           +E N     + I++ LI GLCK   ++ A  L  ++ ++GL P +V Y+ +I G CR G 
Sbjct: 656 VEKNGLVPDLHIYSSLISGLCKMADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGD 715

Query: 489 LEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTF 548
           + +A +    +   G  PN VT+  L+ G  +N   +   +L   M   +R + PD   +
Sbjct: 716 ISRARNVFDSILAKGLLPNCVTYTALIDGNCKNGDITDAFDLYKDML--DRGIAPDAFVY 773

Query: 549 SIVV 552
           +++ 
Sbjct: 774 NVLA 777



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 129/403 (32%), Positives = 198/403 (49%), Gaps = 37/403 (9%)

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
           ++++YS  +++ CK    D AK++F EM+ R      V    +I G C +G  EE  G  
Sbjct: 244 DVYTYSTFLEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAFGFK 303

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
            EM+D G  P+  T+  +++ LCKGG++ EA  LL+ M   GL P+   Y +L+DG+   
Sbjct: 304 EEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKALLDEMSCSGLKPNVVVYATLVDGFMKE 363

Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
           G+   A +I   M S G +   + Y+ LI G CKI  +  A  L  ++I  G R    TY
Sbjct: 364 GKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKVGHRPDTFTY 423

Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHM--- 428
           + L+ G FQ      A +L +EM+   + P+  TY I+I+GLC+N   +EA  L      
Sbjct: 424 HPLMQGHFQHYDKDGAFELLNEMRNSGILPNAYTYGIMINGLCQNGESKEAGNLLEEMIS 483

Query: 429 --LEMNKFEFGIEI------------------------------FNCLIDGLCKAGRLDN 456
             L+ N F +   I                              +N LI GL   GR++ 
Sbjct: 484 EGLKPNAFMYAPLIIGHSKEGHISLACESLENMTKANVLPDLFCYNSLIKGLSTVGRIEE 543

Query: 457 AWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMH 516
           A E + ++ ++GLVP   TYS +IHG C+   LEKA+  L  M  +G  PN  T+  L+ 
Sbjct: 544 AEEYYAQVQKRGLVPDEFTYSGLIHGYCKTRNLEKADQLLQQMLNSGLKPNADTYTDLLE 603

Query: 517 GFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDE 559
           G+ ++N   KV  +L  M        PD+  + IV+  L++ E
Sbjct: 604 GYFKSNDHEKVSSILQSMLGSGDK--PDNHIYGIVIRNLSRSE 644



 Score =  184 bits (468), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 133/537 (24%), Positives = 245/537 (45%), Gaps = 23/537 (4%)

Query: 36  SPETQLNEFLHENCKSG---IINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYD 92
           S   Q N+ +++N   G   I  L  A      M  +   P   +++ L     ++   D
Sbjct: 378 SAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKVGHRPDTFTYHPLMQGHFQHYDKD 437

Query: 93  AVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDV 152
                  ++ + G+LP+  T  I+IN       GLC     KEA  L + MI+ G++P+ 
Sbjct: 438 GAFELLNEMRNSGILPNAYTYGIMIN-------GLCQNGESKEAGNLLEEMISEGLKPNA 490

Query: 153 ITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKA 212
             Y  LI G  + G++S+A    + M   +         ++F Y+ +I  L   G +++A
Sbjct: 491 FMYAPLIIGHSKEGHISLACESLENMTKANV------LPDLFCYNSLIKGLSTVGRIEEA 544

Query: 213 KELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDC 272
           +E + +++ RG+ P     + LIHG+C   N E+ + L  +ML+ G +PN  T+  +++ 
Sbjct: 545 EEYYAQVQKRGLVPDEFTYSGLIHGYCKTRNLEKADQLLQQMLNSGLKPNADTYTDLLEG 604

Query: 273 LCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHT 332
             K     + + +L+ M+  G  PD   Y  ++        ++ A  +   +   G    
Sbjct: 605 YFKSNDHEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPD 664

Query: 333 VVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFD 392
           +  Y+ LI+G CK+ ++E+A+ L  ++   G+   ++ YN L+ G  ++G    A+ +FD
Sbjct: 665 LHIYSSLISGLCKMADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFD 724

Query: 393 EMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAG 452
            +    + P+  TY  LIDG CKN  + +A  L+  +          ++N L  G   A 
Sbjct: 725 SILAKGLLPNCVTYTALIDGNCKNGDITDAFDLYKDMLDRGIAPDAFVYNVLATGCSDAA 784

Query: 453 RLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFN 512
            L+ A  L  ++  +G    V  +S ++ G C++G+L++    L  M      PN  T  
Sbjct: 785 DLEQALFLTEEMFNRGYA-HVSLFSTLVRGFCKRGRLQETEKLLHVMMDREIVPNAQTVE 843

Query: 513 TLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTT--FSIV-VDLLAKDEKYHECSA 566
            ++  F    K  K+ E     AE ++      +T  FS++  D++ K     +C A
Sbjct: 844 NVITEF---GKAGKLCEAHRVFAELQQKKASQSSTDRFSLLFTDMINKGLIPPKCDA 897



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 135/484 (27%), Positives = 213/484 (44%), Gaps = 67/484 (13%)

Query: 135 EATWLFKN-MIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKK---------------M 178
           E  W  K  M   G+ PDV TY T +   C+  +   A ++ ++               M
Sbjct: 227 ELVWKLKGFMEGAGIPPDVYTYSTFLEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVM 286

Query: 179 VSGDYENGLISKT--------------NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGI 224
           +SG   +G + +               + F+Y  +++ LCK G + +AK L  EM   G+
Sbjct: 287 ISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKALLDEMSCSGL 346

Query: 225 NPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANG 284
            P VVV  TL+ GF   G   E   +  EM+  G +PN + ++ +I  LCK G++  A+ 
Sbjct: 347 KPNVVVYATLVDGFMKEGKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQLGRASK 406

Query: 285 LLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYC 344
           LL  MI+ G  PD FTY+ LM G+      D A E+   M + G      +Y I+ING C
Sbjct: 407 LLNEMIKVGHRPDTFTYHPLMQGHFQHYDKDGAFELLNEMRNSGILPNAYTYGIMINGLC 466

Query: 345 KILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLS 404
           +    +EA +L  ++IS G++     Y  L+ G  + G    A +  + M   NV PDL 
Sbjct: 467 QNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGHISLACESLENMTKANVLPDLF 526

Query: 405 TYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKL 464
            YN LI GL     ++EA + +  ++          ++ LI G CK   L+ A +L  ++
Sbjct: 527 CYNSLIKGLSTVGRIEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTRNLEKADQLLQQM 586

Query: 465 PQKGLVPTVVTYS-----------------------------------IMIHGLCRKGKL 489
              GL P   TY+                                   I+I  L R   +
Sbjct: 587 LNSGLKPNADTYTDLLEGYFKSNDHEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENM 646

Query: 490 EKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFS 549
           E A   L  +EKNG  P++  +++L+ G  +     K V LL +MA  +  L P    ++
Sbjct: 647 EVAFMVLTEVEKNGLVPDLHIYSSLISGLCKMADMEKAVGLLDEMA--KEGLEPGIVCYN 704

Query: 550 IVVD 553
            ++D
Sbjct: 705 ALID 708



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 102/349 (29%), Positives = 167/349 (47%), Gaps = 6/349 (1%)

Query: 198 IIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDL 257
           +++D+  K G V  A ++ L M   G+ P    C  L+     A   E V  L   M   
Sbjct: 180 VLVDTYKKNGSVRTAAQVVLMMGDLGLAPTRRCCNGLLKDLLRADAMELVWKLKGFMEGA 239

Query: 258 GPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTA 317
           G  P++ T++  ++  CK    + A  + E M +R    +  TYN ++ G C  G ++ A
Sbjct: 240 GIPPDVYTYSTFLEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEA 299

Query: 318 REIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSG 377
                 M   G      +Y  L+NG CK   ++EA +L  ++  +G++  V+ Y TL+ G
Sbjct: 300 FGFKEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKALLDEMSCSGLKPNVVVYATLVDG 359

Query: 378 LFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFG 437
             + G+A  A  + +EM    V+P+   Y+ LI GLCK   +  A KL +  EM K    
Sbjct: 360 FMKEGKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLN--EMIKVGHR 417

Query: 438 IEIF--NCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDF 495
            + F  + L+ G  +    D A+EL +++   G++P   TY IMI+GLC+ G+ ++A + 
Sbjct: 418 PDTFTYHPLMQGHFQHYDKDGAFELLNEMRNSGILPNAYTYGIMINGLCQNGESKEAGNL 477

Query: 496 LLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPD 544
           L  M   G  PN   +  L+ G  +    S   E L  M +   N++PD
Sbjct: 478 LEEMISEGLKPNAFMYAPLIIGHSKEGHISLACESLENMTKA--NVLPD 524



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 92/377 (24%), Positives = 171/377 (45%), Gaps = 31/377 (8%)

Query: 214 ELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLL--------- 264
           + F   + R   P+      L    C A ++ + NGL  +M+   P P L+         
Sbjct: 101 DFFYWSRPRIAPPSADAFARLAASLCAASHFPQANGLLHQMILAHPHPPLVLASIQRAIQ 160

Query: 265 ----------------TFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGY 308
                             +V++D   K G +  A  ++ +M   GL P R   N L+   
Sbjct: 161 DSDARSPSPSPSHSTAVLDVLVDTYKKNGSVRTAAQVVLMMGDLGLAPTRRCCNGLLKDL 220

Query: 309 CLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTV 368
                ++   ++   M   G    V +Y+  +  +CK  + + A  ++ ++         
Sbjct: 221 LRADAMELVWKLKGFMEGAGIPPDVYTYSTFLEAHCKARDFDAAKKVFEEMRRRDCAMNE 280

Query: 369 ITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHM 428
           +TYN ++SGL ++G    A    +EM  Y + PD  TY  L++GLCK   ++EA  L   
Sbjct: 281 VTYNVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKALLDE 340

Query: 429 LEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGK 488
           +  +  +  + ++  L+DG  K G+   A+++ +++   G+ P  + Y  +I GLC+ G+
Sbjct: 341 MSCSGLKPNVVVYATLVDGFMKEGKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQ 400

Query: 489 LEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERN--LVPDDT 546
           L +A+  L  M K G  P+  T++ LM G  Q+       ELL++M    RN  ++P+  
Sbjct: 401 LGRASKLLNEMIKVGHRPDTFTYHPLMQGHFQHYDKDGAFELLNEM----RNSGILPNAY 456

Query: 547 TFSIVVDLLAKDEKYHE 563
           T+ I+++ L ++ +  E
Sbjct: 457 TYGIMINGLCQNGESKE 473


>gi|302757245|ref|XP_002962046.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
 gi|300170705|gb|EFJ37306.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
          Length = 465

 Score =  229 bits (584), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 134/459 (29%), Positives = 233/459 (50%), Gaps = 19/459 (4%)

Query: 105 GLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCR 164
           G  P+ +T N L+N F         + R  +   L + M A  ++P+V++Y  L+ G C+
Sbjct: 5   GCPPNSVTFNALVNGFSK-------QGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCK 57

Query: 165 TGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGI 224
                 A  L + M+S     G  S  ++ +YS ++   CK G V++++EL  E+  RG+
Sbjct: 58  LERWHEAEELVRDMIS----RGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGL 113

Query: 225 NPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANG 284
            P  ++ T ++   C +    E   L  EM+  G  P L+TFN +I   C+   +  A+ 
Sbjct: 114 RPDALMYTKVVASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADS 173

Query: 285 LLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYC 344
           LL+ M   G+  D  TYN+LMDG C  GR+  A ++   M + GC   VV+Y+  + G C
Sbjct: 174 LLQKMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLC 233

Query: 345 KILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYN-VEPDL 403
           K   V +A  +  Q+  +     V+TYNT+L GL ++G+   A ++ ++M   +    ++
Sbjct: 234 KSGKVLDAHQVLEQMRDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNV 293

Query: 404 STYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHK 463
             Y+ ++DGLCK    QEA  +   +        +  ++ L++GLCKAG+++ A E   +
Sbjct: 294 VGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVRE 353

Query: 464 LPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYM-----EKNGCAPNVVTFNTLMHGF 518
           +  +G  P  VTY  ++HGLC  G+L +A   +  M       + C P+V T+N L+ G 
Sbjct: 354 MAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGHHCPPSVSTYNALIGGL 413

Query: 519 LQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAK 557
            +  +    ++   +M    +   PD  ++S +V+ LA+
Sbjct: 414 CKAGRIDDALKFFQRMR--SQGCDPDGVSYSTIVEGLAR 450



 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 139/461 (30%), Positives = 237/461 (51%), Gaps = 22/461 (4%)

Query: 73  PPIS-SFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVEN 131
           PP S +FN L    +K             + +  + P+ ++ N L+        GLC   
Sbjct: 7   PPNSVTFNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLE-------GLCKLE 59

Query: 132 RIKEATWLFKNMIAFGVR--PDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLIS 189
           R  EA  L ++MI+ G R  PD++TY TL++G+C+ G +  +  L K+++S     GL  
Sbjct: 60  RWHEAEELVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVIS----RGL-- 113

Query: 190 KTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNG 249
           + +   Y+ ++ SLCK   + +A EL  EM   G  P ++   TLI G C   N E  + 
Sbjct: 114 RPDALMYTKVVASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADS 173

Query: 250 LFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYC 309
           L  +M   G + +++T+N ++D LCK G++ EA  LLE M   G  PD   Y+S + G C
Sbjct: 174 LLQKMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLC 233

Query: 310 LVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIIS-NGVRQTV 368
             G++  A ++   M        VV+YN +++G CK   ++ A+ +  Q+ S +G    V
Sbjct: 234 KSGKVLDAHQVLEQMRDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNV 293

Query: 369 ITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHM 428
           + Y+T++ GL + G+   A+ + + M      PD+ TY+ L++GLCK   ++EAV+    
Sbjct: 294 VGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVRE 353

Query: 429 LEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLV-----PTVVTYSIMIHGL 483
           + M   +     +  L+ GLC  GRL  A  +  ++   G       P+V TY+ +I GL
Sbjct: 354 MAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGHHCPPSVSTYNALIGGL 413

Query: 484 CRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKT 524
           C+ G+++ A  F   M   GC P+ V+++T++ G  ++ + 
Sbjct: 414 CKAGRIDDALKFFQRMRSQGCDPDGVSYSTIVEGLARSGRA 454



 Score =  219 bits (558), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 133/439 (30%), Positives = 223/439 (50%), Gaps = 21/439 (4%)

Query: 66  MTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIG--LLPDFLTLNILINCFGNK 123
           M      P + S+N L   + K   +       R ++S G    PD +T + L++     
Sbjct: 36  MAARDIQPNVVSYNGLLEGLCKLERWHEAEELVRDMISRGGRSTPDMVTYSTLLS----- 90

Query: 124 ERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDY 183
             G C   +++E+  L K +I+ G+RPD + Y  ++   C++  L  AL L ++M+    
Sbjct: 91  --GYCKAGKVEESRELLKEVISRGLRPDALMYTKVVASLCKSARLGEALELLEEMIRAGC 148

Query: 184 ENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGN 243
              LI+      ++ +I   C+E  ++ A  L  +M   G+   VV   TL+ G C AG 
Sbjct: 149 CPTLIT------FNTLISGCCREKNLEMADSLLQKMAASGVKADVVTYNTLMDGLCKAGR 202

Query: 244 WEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNS 303
            +E   L   M   G  P+++ ++  +  LCK GK+ +A+ +LE M     +P+  TYN+
Sbjct: 203 LQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLDAHQVLEQMRDSHHDPNVVTYNT 262

Query: 304 LMDGYCLVGRIDTAREIFLSM-HSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISN 362
           ++DG C  G+IDTA E+   M  S GC   VV Y+ +++G CK+   +EA S+   +   
Sbjct: 263 ILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARA 322

Query: 363 GVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEA 422
           G R  V+TY++L++GL +AG+   A +   EM +   +P+  TY  L+ GLC    + EA
Sbjct: 323 GCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEA 382

Query: 423 VKLFHMLEMNKFEF-----GIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYS 477
            ++   +             +  +N LI GLCKAGR+D+A + F ++  +G  P  V+YS
Sbjct: 383 ERMVEEMSSGGGGGHHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDPDGVSYS 442

Query: 478 IMIHGLCRKGKLEKANDFL 496
            ++ GL R G+  +A   L
Sbjct: 443 TIVEGLARSGRALQAEMIL 461



 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 107/355 (30%), Positives = 189/355 (53%), Gaps = 38/355 (10%)

Query: 219 MKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGK 278
           M   G  P  V    L++GF   G   +   L   M     +PN++++N +++ LCK  +
Sbjct: 1   MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLER 60

Query: 279 INEANGLLELMIQRG--LNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSK--------- 327
            +EA  L+  MI RG    PD  TY++L+ GYC  G+++ +RE+   + S+         
Sbjct: 61  WHEAEELVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMY 120

Query: 328 --------------------------GCKHTVVSYNILINGYCKILNVEEAMSLYRQIIS 361
                                     GC  T++++N LI+G C+  N+E A SL +++ +
Sbjct: 121 TKVVASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAA 180

Query: 362 NGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQE 421
           +GV+  V+TYNTL+ GL +AG+   A++L + MK     PD+  Y+  + GLCK+  V +
Sbjct: 181 SGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLD 240

Query: 422 AVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQK-GLVPTVVTYSIMI 480
           A ++   +  +  +  +  +N ++DGLCK+G++D A E+  ++    G    VV YS ++
Sbjct: 241 AHQVLEQMRDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVV 300

Query: 481 HGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMA 535
            GLC+ G+ ++A   +  M + GC P+VVT+++L++G  +  K  + VE + +MA
Sbjct: 301 DGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMA 355



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 112/334 (33%), Positives = 182/334 (54%), Gaps = 9/334 (2%)

Query: 258 GPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTA 317
           G  PN +TFN +++   K G+  +   LLE M  R + P+  +YN L++G C + R   A
Sbjct: 5   GCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLERWHEA 64

Query: 318 REIFLSMHSKGCKHT--VVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLL 375
            E+   M S+G + T  +V+Y+ L++GYCK   VEE+  L +++IS G+R   + Y  ++
Sbjct: 65  EELVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVV 124

Query: 376 SGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFE 435
           + L ++ + G A +L +EM      P L T+N LI G C+   ++ A  L   +  +  +
Sbjct: 125 ASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAASGVK 184

Query: 436 FGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDF 495
             +  +N L+DGLCKAGRL  A +L  ++   G  P VV YS  ++GLC+ GK+  A+  
Sbjct: 185 ADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLDAHQV 244

Query: 496 LLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPER---NLVPDDTTFSIVV 552
           L  M  +   PNVVT+NT++ G  ++ K    +E++ +MA  +    N+V     +S VV
Sbjct: 245 LEQMRDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVV----GYSTVV 300

Query: 553 DLLAKDEKYHECSAVSKSSYRACLYVTIFQPSSL 586
           D L K  +  E  +V ++  RA     +   SSL
Sbjct: 301 DGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSL 334



 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 100/331 (30%), Positives = 176/331 (53%), Gaps = 23/331 (6%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
           P + +FN L     + ++ +   S  +K+ + G+  D +T N L++       GLC   R
Sbjct: 150 PTLITFNTLISGCCREKNLEMADSLLQKMAASGVKADVVTYNTLMD-------GLCKAGR 202

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
           ++EA  L + M A G  PDV+ Y + + G C++G +  A ++ ++M    ++       N
Sbjct: 203 LQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLDAHQVLEQMRDSHHD------PN 256

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMK---GRGINPAVVVCTTLIHGFCCAGNWEEVNG 249
           + +Y+ I+D LCK G +D A E+  +M    G G+N  VV  +T++ G C  G  +E   
Sbjct: 257 VVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLN--VVGYSTVVDGLCKLGRTQEARS 314

Query: 250 LFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYC 309
           +   M   G RP+++T++ +++ LCK GKI EA   +  M   G  P+  TY SL+ G C
Sbjct: 315 VMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLC 374

Query: 310 LVGRIDTAREIFLSMHSKG-----CKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGV 364
             GR+  A  +   M S G     C  +V +YN LI G CK   +++A+  ++++ S G 
Sbjct: 375 SCGRLAEAERMVEEMSSGGGGGHHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQGC 434

Query: 365 RQTVITYNTLLSGLFQAGQAGYAQKLFDEMK 395
               ++Y+T++ GL ++G+A  A+ +  E++
Sbjct: 435 DPDGVSYSTIVEGLARSGRALQAEMILSEVR 465



 Score = 46.2 bits (108), Expect = 0.057,   Method: Compositional matrix adjust.
 Identities = 25/100 (25%), Positives = 45/100 (45%)

Query: 464 LPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNK 523
           + + G  P  VT++ +++G  ++G+       L  M      PNVV++N L+ G  +  +
Sbjct: 1   MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLER 60

Query: 524 TSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
             +  EL+  M        PD  T+S ++    K  K  E
Sbjct: 61  WHEAEELVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEE 100


>gi|225427506|ref|XP_002263778.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g31840-like [Vitis vinifera]
          Length = 1131

 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 146/529 (27%), Positives = 264/529 (49%), Gaps = 50/529 (9%)

Query: 59  ARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILIN 118
           A  FF  M    PSP + +F+ L     K    D   S Y  ++  G++PD +  +ILIN
Sbjct: 259 ASDFFDMMVRSGPSPNLVTFSTLINVYCKELRLDEAFSLYNLMIEKGIVPDLVIYSILIN 318

Query: 119 CFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKM 178
                  GL    +++E   LF   +A GV+ DV+ + ++++ + R G+L  A+ ++ +M
Sbjct: 319 -------GLFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRM 371

Query: 179 VSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGF 238
           +    + G+    N+ +YSI+I+ LC+ G V +A  +F ++  +G+ P+V+  ++LI GF
Sbjct: 372 L----KEGI--SPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGF 425

Query: 239 CCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDR 298
           C + N  +  GL+  ML  G  P+++  +++I+ L + G ++EA       ++RGL  + 
Sbjct: 426 CKSENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNN 485

Query: 299 FTYNSLMDG-------------YCLV----------------------GRIDTAREIFLS 323
           + +N+L+DG             Y L+                      GR+D A  +F  
Sbjct: 486 YLFNALIDGCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQ 545

Query: 324 MHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQ 383
           +  KG     + Y  LI+G+CK  +    + +++ + SNG+   +  YN L++  F+ G 
Sbjct: 546 LLKKGFSPDHIIYCTLIDGFCKKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFREGC 605

Query: 384 AGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNC 443
                +L  E+  Y +EPD+ TYN +I G C      +A+KLF +L+  + +     F  
Sbjct: 606 VENVLELLREIIKYGLEPDIVTYNTMICGYCSLKIFSKAIKLFEVLKCGRTQPNAITFTI 665

Query: 444 LIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNG 503
           LID  CK GR+D+A  +F  + ++G  P ++TYS +I G  +    E A +    M  + 
Sbjct: 666 LIDAYCKDGRMDDAMLIFSSMLERGPEPNILTYSCLIDGYFKTENTESAFELYEKMLGDR 725

Query: 504 CAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVV 552
            +PN+V+++ L+ G  +     +    L       R+L+PD   + I++
Sbjct: 726 VSPNIVSYSILIDGLCKKGLMEEAS--LAFQCAIGRHLLPDVIAYGILI 772



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 150/566 (26%), Positives = 276/566 (48%), Gaps = 47/566 (8%)

Query: 35  SSPETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPS---------------------- 72
           S+P T  +  LH  C++G+++   A   F +M+ M  S                      
Sbjct: 137 SNPSTVYSFLLHCYCRNGMVD--RAVDTFAWMSKMGVSISHYAASEMLDLLIDSDRIDVI 194

Query: 73  --------PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKE 124
                     +  +  +F +  K    +  ++F+R LV  GL+P  +  N ++       
Sbjct: 195 LENYEEMCKGLGVYEFVFNSFLKRGEVEKGLNFHRALVERGLVPKIVDCNKIL------- 247

Query: 125 RGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYE 184
           +GLC+ N+I  A+  F  M+  G  P+++T+ TLIN +C+   L  A  L+  M+    E
Sbjct: 248 KGLCMGNQIGVASDFFDMMVRSGPSPNLVTFSTLINVYCKELRLDEAFSLYNLMI----E 303

Query: 185 NGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNW 244
            G++    I  YSI+I+ L + G +++   LF     RG+   VV+ ++++  +   G+ 
Sbjct: 304 KGIVPDLVI--YSILINGLFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDL 361

Query: 245 EEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSL 304
            +   ++  ML  G  PN++T++++I+ LC+ G++ EA G+   ++++GL P   TY+SL
Sbjct: 362 GKAIEVYTRMLKEGISPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSL 421

Query: 305 MDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGV 364
           +DG+C    +     ++  M  KG    VV  ++LING  +   ++EA+  + Q +  G+
Sbjct: 422 IDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGL 481

Query: 365 RQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVK 424
                 +N L+ G F+  +     K++  M +Y V PD+ TY +L+ GL +   + EA+ 
Sbjct: 482 TLNNYLFNALIDGCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALA 541

Query: 425 LFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLC 484
           LF  L    F     I+  LIDG CK        ++F  +   G+ P +  Y+++I+   
Sbjct: 542 LFFQLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFF 601

Query: 485 RKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPD 544
           R+G +E   + L  + K G  P++VT+NT++ G+      SK ++L   +        P+
Sbjct: 602 REGCVENVLELLREIIKYGLEPDIVTYNTMICGYCSLKIFSKAIKLFEVLKCGRTQ--PN 659

Query: 545 DTTFSIVVDLLAKDEKYHECSAVSKS 570
             TF+I++D   KD +  +   +  S
Sbjct: 660 AITFTILIDAYCKDGRMDDAMLIFSS 685



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 113/432 (26%), Positives = 211/432 (48%), Gaps = 39/432 (9%)

Query: 166 GNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGIN 225
           GNL V    H     G + N   + + +  YS ++   C+ G+VD+A + F  M   G++
Sbjct: 120 GNLEVLGEFH-----GSFRNYGSNPSTV--YSFLLHCYCRNGMVDRAVDTFAWMSKMGVS 172

Query: 226 PAVVVCTTLI------------------------------HGFCCAGNWEEVNGLFIEML 255
            +    + ++                              + F   G  E+       ++
Sbjct: 173 ISHYAASEMLDLLIDSDRIDVILENYEEMCKGLGVYEFVFNSFLKRGEVEKGLNFHRALV 232

Query: 256 DLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRID 315
           + G  P ++  N ++  LC G +I  A+   ++M++ G +P+  T+++L++ YC   R+D
Sbjct: 233 ERGLVPKIVDCNKILKGLCMGNQIGVASDFFDMMVRSGPSPNLVTFSTLINVYCKELRLD 292

Query: 316 TAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLL 375
            A  ++  M  KG    +V Y+ILING  +   +EE  SL+   ++ GV+  V+ +++++
Sbjct: 293 EAFSLYNLMIEKGIVPDLVIYSILINGLFRAGKLEEGNSLFSMALARGVKMDVVIFSSIM 352

Query: 376 SGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFE 435
               + G  G A +++  M    + P++ TY+ILI+GLC+N  V EA  +F  +     E
Sbjct: 353 DAYVRVGDLGKAIEVYTRMLKEGISPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLE 412

Query: 436 FGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDF 495
             +  ++ LIDG CK+  L + + L+  + +KG VP VV  S++I+GL R+G +++A  F
Sbjct: 413 PSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRF 472

Query: 496 LLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLL 555
                K G   N   FN L+ G  +  +T   +++   M      ++PD  T++++V  L
Sbjct: 473 FFQAVKRGLTLNNYLFNALIDGCFRLKRTRDGLKMYILMG--MYKVIPDVVTYTVLVKGL 530

Query: 556 AKDEKYHECSAV 567
           A+  +  E  A+
Sbjct: 531 AEQGRLDEALAL 542



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 113/383 (29%), Positives = 183/383 (47%), Gaps = 38/383 (9%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CKS   NL +    +G M      P +   ++L   +++    D  + F+ + V  GL  
Sbjct: 426 CKSE--NLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTL 483

Query: 109 DFLTLNILIN-CFGNKE---------------------------RGLCVENRIKEATWLF 140
           +    N LI+ CF  K                            +GL  + R+ EA  LF
Sbjct: 484 NNYLFNALIDGCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALF 543

Query: 141 KNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIII 200
             ++  G  PD I Y TLI+GFC+  + +  L++ K M S    NG+     I  Y+++I
Sbjct: 544 FQLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQIFKLMQS----NGIFPDICI--YNVLI 597

Query: 201 DSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLG-P 259
           +   +EG V+   EL  E+   G+ P +V   T+I G+C    + +   LF E+L  G  
Sbjct: 598 NMFFREGCVENVLELLREIIKYGLEPDIVTYNTMICGYCSLKIFSKAIKLF-EVLKCGRT 656

Query: 260 RPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTARE 319
           +PN +TF ++ID  CK G++++A  +   M++RG  P+  TY+ L+DGY      ++A E
Sbjct: 657 QPNAITFTILIDAYCKDGRMDDAMLIFSSMLERGPEPNILTYSCLIDGYFKTENTESAFE 716

Query: 320 IFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLF 379
           ++  M        +VSY+ILI+G CK   +EEA   ++  I   +   VI Y  L+ G  
Sbjct: 717 LYEKMLGDRVSPNIVSYSILIDGLCKKGLMEEASLAFQCAIGRHLLPDVIAYGILIRGYC 776

Query: 380 QAGQAGYAQKLFDEMKLYNVEPD 402
           + G+   A  L+D M +  + PD
Sbjct: 777 KVGRLAEAMMLYDHMLVNGIMPD 799


>gi|359481971|ref|XP_003632699.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
           mitochondrial-like [Vitis vinifera]
          Length = 819

 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 151/512 (29%), Positives = 250/512 (48%), Gaps = 24/512 (4%)

Query: 56  LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNI 115
           + +A   F  M   + +P   ++N L     K    +   +   ++    + P  +T N 
Sbjct: 233 MKDAEKLFDEMLDRRVAPNRITYNTLIDGYCKVGQLEEAFNIRERMKVENVEPTIITFNS 292

Query: 116 LINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLH 175
           L+N       GLC    ++EA  + + M  +G  PD  TY TL +G  + GN+  ++ L 
Sbjct: 293 LLN-------GLCRAQMMEEAQRVLEEMEVYGFVPDRFTYTTLFDGHLKCGNVDASITLS 345

Query: 176 KKMVSGDYENGLISKTNIFSY--SIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTT 233
           ++ V             I  Y  SI++++LCKEG ++KA+E+  +    G+ P  V   T
Sbjct: 346 EEAVR--------KGVQILDYTCSILLNALCKEGNMEKAEEVLKKFLENGLAPVGVFFNT 397

Query: 234 LIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRG 293
           +++G+C  G+  +      +M  +G RPN +T+N ++   C+   + EA   ++ M+++G
Sbjct: 398 IVNGYCQVGDINKAYTTIEKMEAVGLRPNHVTYNSLVKKFCEMKNMEEAEKCIKKMVEKG 457

Query: 294 LNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAM 353
           + P+  TYN+L+DGY      D   +I   M  KG K  V+SY  LIN  CK  N+ EA 
Sbjct: 458 VLPNVETYNTLIDGYGRSCLFDRCFQILEEMEKKGLKPNVISYGCLINCLCKDANILEAE 517

Query: 354 SLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGL 413
            +   ++  GV      YN L+ G   AG+   A + FDEM    + P L TYNILI+GL
Sbjct: 518 VILGDMVHRGVVPNAQIYNMLIDGSCIAGKLKDAFRFFDEMVAREIVPTLVTYNILINGL 577

Query: 414 CKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTV 473
           CK   V EA  L   +      F +  +N LI G   AG +  A EL+  + + G+ PT+
Sbjct: 578 CKKGKVMEAENLASEITRKGLSFDVITYNSLISGYSSAGNVQKALELYETMKKSGIKPTL 637

Query: 474 VTYSIMIHGLCRKG--KLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELL 531
            TY  +I G  ++G   +EK    +L M      P+ V +N L+H ++++    K    L
Sbjct: 638 NTYHRLIAGCGKEGLVLVEKIYQEMLQM---NLVPDRVIYNALIHCYVEHGDVQKACS-L 693

Query: 532 HKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
           H   E +  + PD  T++ ++    K+ + H+
Sbjct: 694 HSAMEAQ-GIQPDKMTYNCLILGHFKEGRMHK 724



 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 146/540 (27%), Positives = 250/540 (46%), Gaps = 16/540 (2%)

Query: 71  PSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVE 130
           P  P+ S ++L    ++++        Y  +   G+LP   +LN+ +         L   
Sbjct: 109 PMKPLFS-DMLLSICSESKMVSESAELYMLMKKDGVLPSVASLNLFL-------ESLVST 160

Query: 131 NRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISK 190
            R ++   LF  ++  G+RPD   YG  I    + G+L  A+ L   M  G    G    
Sbjct: 161 KRYEDTLQLFSEIVESGLRPDQFMYGKAIQAAVKLGDLKRAIELMTCMKRGGVSPG---- 216

Query: 191 TNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGL 250
             +F Y+++I  LCKE  +  A++LF EM  R + P  +   TLI G+C  G  EE   +
Sbjct: 217 --VFVYNVVIGGLCKEKRMKDAEKLFDEMLDRRVAPNRITYNTLIDGYCKVGQLEEAFNI 274

Query: 251 FIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCL 310
              M      P ++TFN +++ LC+   + EA  +LE M   G  PDRFTY +L DG+  
Sbjct: 275 RERMKVENVEPTIITFNSLLNGLCRAQMMEEAQRVLEEMEVYGFVPDRFTYTTLFDGHLK 334

Query: 311 VGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVIT 370
            G +D +  +      KG +    + +IL+N  CK  N+E+A  + ++ + NG+    + 
Sbjct: 335 CGNVDASITLSEEAVRKGVQILDYTCSILLNALCKEGNMEKAEEVLKKFLENGLAPVGVF 394

Query: 371 YNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLE 430
           +NT+++G  Q G    A    ++M+   + P+  TYN L+   C+   ++EA K    + 
Sbjct: 395 FNTIVNGYCQVGDINKAYTTIEKMEAVGLRPNHVTYNSLVKKFCEMKNMEEAEKCIKKMV 454

Query: 431 MNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLE 490
                  +E +N LIDG  ++   D  +++  ++ +KGL P V++Y  +I+ LC+   + 
Sbjct: 455 EKGVLPNVETYNTLIDGYGRSCLFDRCFQILEEMEKKGLKPNVISYGCLINCLCKDANIL 514

Query: 491 KANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSI 550
           +A   L  M   G  PN   +N L+ G     K         +M    R +VP   T++I
Sbjct: 515 EAEVILGDMVHRGVVPNAQIYNMLIDGSCIAGKLKDAFRFFDEMV--AREIVPTLVTYNI 572

Query: 551 VVDLLAKDEKYHECSAVSKSSYRACLYVTIFQPSSLGSMIGCTVRLMPQPEMSDTLGDDG 610
           +++ L K  K  E   ++    R  L   +   +SL S       +    E+ +T+   G
Sbjct: 573 LINGLCKKGKVMEAENLASEITRKGLSFDVITYNSLISGYSSAGNVQKALELYETMKKSG 632



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 131/446 (29%), Positives = 223/446 (50%), Gaps = 14/446 (3%)

Query: 79  NLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATW 138
           ++L  A+ K  + +      +K +  GL P  +  N ++N       G C    I +A  
Sbjct: 361 SILLNALCKEGNMEKAEEVLKKFLENGLAPVGVFFNTIVN-------GYCQVGDINKAYT 413

Query: 139 LFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSI 198
             + M A G+RP+ +TY +L+  FC   N+  A +  KKMV    E G++   N+ +Y+ 
Sbjct: 414 TIEKMEAVGLRPNHVTYNSLVKKFCEMKNMEEAEKCIKKMV----EKGVLP--NVETYNT 467

Query: 199 IIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLG 258
           +ID   +  L D+  ++  EM+ +G+ P V+    LI+  C   N  E   +  +M+  G
Sbjct: 468 LIDGYGRSCLFDRCFQILEEMEKKGLKPNVISYGCLINCLCKDANILEAEVILGDMVHRG 527

Query: 259 PRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAR 318
             PN   +N++ID  C  GK+ +A    + M+ R + P   TYN L++G C  G++  A 
Sbjct: 528 VVPNAQIYNMLIDGSCIAGKLKDAFRFFDEMVAREIVPTLVTYNILINGLCKKGKVMEAE 587

Query: 319 EIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGL 378
            +   +  KG    V++YN LI+GY    NV++A+ LY  +  +G++ T+ TY+ L++G 
Sbjct: 588 NLASEITRKGLSFDVITYNSLISGYSSAGNVQKALELYETMKKSGIKPTLNTYHRLIAGC 647

Query: 379 FQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGI 438
            + G     +K++ EM   N+ PD   YN LI    ++  VQ+A  L   +E    +   
Sbjct: 648 GKEGLV-LVEKIYQEMLQMNLVPDRVIYNALIHCYVEHGDVQKACSLHSAMEAQGIQPDK 706

Query: 439 EIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLY 498
             +NCLI G  K GR+     L + +  +GL+P   TY I+I G C+    + A  +   
Sbjct: 707 MTYNCLILGHFKEGRMHKVKNLVNDMKIRGLIPKTETYDILIVGHCKLKDFDGAYVWYRE 766

Query: 499 MEKNGCAPNVVTFNTLMHGFLQNNKT 524
           M +NG  P+V   + L+ G  +  ++
Sbjct: 767 MFENGFTPSVSICDNLITGLREEGRS 792



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 126/445 (28%), Positives = 214/445 (48%), Gaps = 16/445 (3%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CK G  N+ +A            +P    FN +     +    +   +   K+ ++GL P
Sbjct: 368 CKEG--NMEKAEEVLKKFLENGLAPVGVFFNTIVNGYCQVGDINKAYTTIEKMEAVGLRP 425

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           + +T N L+  F       C    ++EA    K M+  GV P+V TY TLI+G+ R+   
Sbjct: 426 NHVTYNSLVKKF-------CEMKNMEEAEKCIKKMVEKGVLPNVETYNTLIDGYGRSCLF 478

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
               ++ ++M     + GL  K N+ SY  +I+ LCK+  + +A+ +  +M  RG+ P  
Sbjct: 479 DRCFQILEEM----EKKGL--KPNVISYGCLINCLCKDANILEAEVILGDMVHRGVVPNA 532

Query: 229 VVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLEL 288
            +   LI G C AG  ++    F EM+     P L+T+N++I+ LCK GK+ EA  L   
Sbjct: 533 QIYNMLIDGSCIAGKLKDAFRFFDEMVAREIVPTLVTYNILINGLCKKGKVMEAENLASE 592

Query: 289 MIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILN 348
           + ++GL+ D  TYNSL+ GY   G +  A E++ +M   G K T+ +Y+ LI G C    
Sbjct: 593 ITRKGLSFDVITYNSLISGYSSAGNVQKALELYETMKKSGIKPTLNTYHRLIAG-CGKEG 651

Query: 349 VEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNI 408
           +     +Y++++   +    + YN L+    + G    A  L   M+   ++PD  TYN 
Sbjct: 652 LVLVEKIYQEMLQMNLVPDRVIYNALIHCYVEHGDVQKACSLHSAMEAQGIQPDKMTYNC 711

Query: 409 LIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKG 468
           LI G  K   + +   L + +++       E ++ LI G CK    D A+  + ++ + G
Sbjct: 712 LILGHFKEGRMHKVKNLVNDMKIRGLIPKTETYDILIVGHCKLKDFDGAYVWYREMFENG 771

Query: 469 LVPTVVTYSIMIHGLCRKGKLEKAN 493
             P+V     +I GL  +G+   A+
Sbjct: 772 FTPSVSICDNLITGLREEGRSHDAD 796



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 99/376 (26%), Positives = 173/376 (46%), Gaps = 47/376 (12%)

Query: 55  NLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLN 114
           N+ EA      M      P + ++N L     ++  +D       ++   GL P+ ++  
Sbjct: 442 NMEEAEKCIKKMVEKGVLPNVETYNTLIDGYGRSCLFDRCFQILEEMEKKGLKPNVISYG 501

Query: 115 ILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRL 174
            LINC       LC +  I EA  +  +M+  GV P+   Y  LI+G C  G L  A R 
Sbjct: 502 CLINC-------LCKDANILEAEVILGDMVHRGVVPNAQIYNMLIDGSCIAGKLKDAFRF 554

Query: 175 HKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTL 234
             +MV+ +    L++      Y+I+I+ LCK+G V +A+ L  E+  +G++  V+   +L
Sbjct: 555 FDEMVAREIVPTLVT------YNILINGLCKKGKVMEAENLASEITRKGLSFDVITYNSL 608

Query: 235 IHGFCCAGNWEE----------------------------------VNGLFIEMLDLGPR 260
           I G+  AGN ++                                  V  ++ EML +   
Sbjct: 609 ISGYSSAGNVQKALELYETMKKSGIKPTLNTYHRLIAGCGKEGLVLVEKIYQEMLQMNLV 668

Query: 261 PNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREI 320
           P+ + +N +I C  + G + +A  L   M  +G+ PD+ TYN L+ G+   GR+   + +
Sbjct: 669 PDRVIYNALIHCYVEHGDVQKACSLHSAMEAQGIQPDKMTYNCLILGHFKEGRMHKVKNL 728

Query: 321 FLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQ 380
              M  +G      +Y+ILI G+CK+ + + A   YR++  NG   +V   + L++GL +
Sbjct: 729 VNDMKIRGLIPKTETYDILIVGHCKLKDFDGAYVWYREMFENGFTPSVSICDNLITGLRE 788

Query: 381 AGQAGYAQKLFDEMKL 396
            G++  A  +  EM +
Sbjct: 789 EGRSHDADVICSEMNM 804


>gi|62320494|dbj|BAD95034.1| hypothetical protein [Arabidopsis thaliana]
          Length = 602

 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 141/492 (28%), Positives = 236/492 (47%), Gaps = 43/492 (8%)

Query: 38  ETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISF 97
           +TQ+ +  H +C+SG  N  E+ +    M     +P +     L       R+    +  
Sbjct: 89  DTQMLKIFHRSCRSG--NYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRV 146

Query: 98  YRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGT 157
              L   G  PD    N LIN       G C  NRI +AT +   M +    PD +TY  
Sbjct: 147 MEILEKFGQ-PDVFAYNALIN-------GFCKMNRIDDATRVLDRMRSKDFSPDTVTYNI 198

Query: 158 LINGFCRTGNLSVALRLHKKMVSGDYENGLIS---------------------------- 189
           +I   C  G L +AL++  +++S + +  +I+                            
Sbjct: 199 MIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRG 258

Query: 190 -KTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVN 248
            K ++F+Y+ II  +CKEG+VD+A E+   ++ +G  P V+    L+      G WEE  
Sbjct: 259 LKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGE 318

Query: 249 GLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGY 308
            L  +M      PN++T++++I  LC+ GKI EA  LL+LM ++GL PD ++Y+ L+  +
Sbjct: 319 KLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAF 378

Query: 309 CLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTV 368
           C  GR+D A E   +M S GC   +V+YN ++   CK    ++A+ ++ ++   G     
Sbjct: 379 CREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNS 438

Query: 369 ITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHM 428
            +YNT+ S L+ +G    A  +  EM    ++PD  TYN +I  LC+   V EA +L   
Sbjct: 439 SSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVD 498

Query: 429 LEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGL----C 484
           +   +F   +  +N ++ G CKA R+++A  +   +   G  P   TY+++I G+     
Sbjct: 499 MRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGY 558

Query: 485 RKGKLEKANDFL 496
           R   +E AND +
Sbjct: 559 RAEAMELANDLV 570



 Score =  191 bits (486), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 101/333 (30%), Positives = 183/333 (54%), Gaps = 1/333 (0%)

Query: 204 CKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNL 263
           C+ G   ++  L   M  +G NP V++CT LI GF    N  +   + +E+L+   +P++
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRV-MEILEKFGQPDV 158

Query: 264 LTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLS 323
             +N +I+  CK  +I++A  +L+ M  +  +PD  TYN ++   C  G++D A ++   
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQ 218

Query: 324 MHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQ 383
           + S  C+ TV++Y ILI        V+EA+ L  +++S G++  + TYNT++ G+ + G 
Sbjct: 219 LLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGM 278

Query: 384 AGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNC 443
              A ++   ++L   EPD+ +YNIL+  L      +E  KL   +   K +  +  ++ 
Sbjct: 279 VDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSI 338

Query: 444 LIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNG 503
           LI  LC+ G+++ A  L   + +KGL P   +Y  +I   CR+G+L+ A +FL  M  +G
Sbjct: 339 LITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDG 398

Query: 504 CAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAE 536
           C P++V +NT++    +N K  + +E+  K+ E
Sbjct: 399 CLPDIVNYNTVLATLCKNGKADQALEIFGKLGE 431



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 117/425 (27%), Positives = 202/425 (47%), Gaps = 9/425 (2%)

Query: 128 CVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGL 187
           C      E+  L + M+  G  PDVI    LI GF    N+  A+R+ + +         
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEK------- 152

Query: 188 ISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEV 247
             + ++F+Y+ +I+  CK   +D A  +   M+ +  +P  V    +I   C  G  +  
Sbjct: 153 FGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLA 212

Query: 248 NGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDG 307
             +  ++L    +P ++T+ ++I+     G ++EA  L++ M+ RGL PD FTYN+++ G
Sbjct: 213 LKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRG 272

Query: 308 YCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQT 367
            C  G +D A E+  ++  KG +  V+SYNIL+         EE   L  ++ S      
Sbjct: 273 MCKEGMVDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPN 332

Query: 368 VITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFH 427
           V+TY+ L++ L + G+   A  L   MK   + PD  +Y+ LI   C+   +  A++   
Sbjct: 333 VVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLE 392

Query: 428 MLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKG 487
            +  +     I  +N ++  LCK G+ D A E+F KL + G  P   +Y+ M   L   G
Sbjct: 393 TMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSG 452

Query: 488 KLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTT 547
              +A   +L M  NG  P+ +T+N+++    +     +  ELL  M   E    P   T
Sbjct: 453 DKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCE--FHPSVVT 510

Query: 548 FSIVV 552
           ++IV+
Sbjct: 511 YNIVL 515



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 107/396 (27%), Positives = 191/396 (48%), Gaps = 9/396 (2%)

Query: 163 CRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGR 222
           CR+GN   +L L + MV   Y   +I  T +      + ++ K   V +  E F +    
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFGQ---- 155

Query: 223 GINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEA 282
              P V     LI+GFC     ++   +   M      P+ +T+N+MI  LC  GK++ A
Sbjct: 156 ---PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLA 212

Query: 283 NGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILING 342
             +L  ++     P   TY  L++   L G +D A ++   M S+G K  + +YN +I G
Sbjct: 213 LKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRG 272

Query: 343 YCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPD 402
            CK   V+ A  + R +   G    VI+YN LL  L   G+    +KL  +M     +P+
Sbjct: 273 MCKEGMVDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPN 332

Query: 403 LSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFH 462
           + TY+ILI  LC++  ++EA+ L  +++          ++ LI   C+ GRLD A E   
Sbjct: 333 VVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLE 392

Query: 463 KLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNN 522
            +   G +P +V Y+ ++  LC+ GK ++A +    + + GC+PN  ++NT+      + 
Sbjct: 393 TMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSG 452

Query: 523 KTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKD 558
              + + ++ +M      + PD+ T++ ++  L ++
Sbjct: 453 DKIRALHMILEMM--SNGIDPDEITYNSMISCLCRE 486



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 42/169 (24%), Positives = 71/169 (42%), Gaps = 30/169 (17%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
           N  L   CK+G    ++A   FG +  +  SP  SS+N +F A+  +      +    ++
Sbjct: 407 NTVLATLCKNG--KADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEM 464

Query: 102 VSIGLLPDFLTLNILINCFGNKER----------------------------GLCVENRI 133
           +S G+ PD +T N +I+C   +                              G C  +RI
Sbjct: 465 MSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRI 524

Query: 134 KEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGD 182
           ++A  + ++M+  G RP+  TY  LI G    G  + A+ L   +V  D
Sbjct: 525 EDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRID 573


>gi|18397002|ref|NP_566237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207286|sp|Q9SR00.1|PP213_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g04760, chloroplastic; Flags: Precursor
 gi|6175176|gb|AAF04902.1|AC011437_17 hypothetical protein [Arabidopsis thaliana]
 gi|15810359|gb|AAL07067.1| unknown protein [Arabidopsis thaliana]
 gi|22136960|gb|AAM91709.1| unknown protein [Arabidopsis thaliana]
 gi|332640611|gb|AEE74132.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 602

 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 141/492 (28%), Positives = 236/492 (47%), Gaps = 43/492 (8%)

Query: 38  ETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISF 97
           +TQ+ +  H +C+SG  N  E+ +    M     +P +     L       R+    +  
Sbjct: 89  DTQMLKIFHRSCRSG--NYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRV 146

Query: 98  YRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGT 157
              L   G  PD    N LIN       G C  NRI +AT +   M +    PD +TY  
Sbjct: 147 MEILEKFGQ-PDVFAYNALIN-------GFCKMNRIDDATRVLDRMRSKDFSPDTVTYNI 198

Query: 158 LINGFCRTGNLSVALRLHKKMVSGDYENGLIS---------------------------- 189
           +I   C  G L +AL++  +++S + +  +I+                            
Sbjct: 199 MIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRG 258

Query: 190 -KTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVN 248
            K ++F+Y+ II  +CKEG+VD+A E+   ++ +G  P V+    L+      G WEE  
Sbjct: 259 LKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGE 318

Query: 249 GLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGY 308
            L  +M      PN++T++++I  LC+ GKI EA  LL+LM ++GL PD ++Y+ L+  +
Sbjct: 319 KLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAF 378

Query: 309 CLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTV 368
           C  GR+D A E   +M S GC   +V+YN ++   CK    ++A+ ++ ++   G     
Sbjct: 379 CREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNS 438

Query: 369 ITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHM 428
            +YNT+ S L+ +G    A  +  EM    ++PD  TYN +I  LC+   V EA +L   
Sbjct: 439 SSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVD 498

Query: 429 LEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGL----C 484
           +   +F   +  +N ++ G CKA R+++A  +   +   G  P   TY+++I G+     
Sbjct: 499 MRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGY 558

Query: 485 RKGKLEKANDFL 496
           R   +E AND +
Sbjct: 559 RAEAMELANDLV 570



 Score =  191 bits (486), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 101/333 (30%), Positives = 183/333 (54%), Gaps = 1/333 (0%)

Query: 204 CKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNL 263
           C+ G   ++  L   M  +G NP V++CT LI GF    N  +   + +E+L+   +P++
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRV-MEILEKFGQPDV 158

Query: 264 LTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLS 323
             +N +I+  CK  +I++A  +L+ M  +  +PD  TYN ++   C  G++D A ++   
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQ 218

Query: 324 MHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQ 383
           + S  C+ TV++Y ILI        V+EA+ L  +++S G++  + TYNT++ G+ + G 
Sbjct: 219 LLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGM 278

Query: 384 AGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNC 443
              A ++   ++L   EPD+ +YNIL+  L      +E  KL   +   K +  +  ++ 
Sbjct: 279 VDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSI 338

Query: 444 LIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNG 503
           LI  LC+ G+++ A  L   + +KGL P   +Y  +I   CR+G+L+ A +FL  M  +G
Sbjct: 339 LITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDG 398

Query: 504 CAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAE 536
           C P++V +NT++    +N K  + +E+  K+ E
Sbjct: 399 CLPDIVNYNTVLATLCKNGKADQALEIFGKLGE 431



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 118/425 (27%), Positives = 203/425 (47%), Gaps = 9/425 (2%)

Query: 128 CVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGL 187
           C      E+  L + M+  G  PDVI    LI GF    N+  A+R+ + +         
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEK------- 152

Query: 188 ISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEV 247
             + ++F+Y+ +I+  CK   +D A  +   M+ +  +P  V    +I   C  G  +  
Sbjct: 153 FGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLA 212

Query: 248 NGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDG 307
             +  ++L    +P ++T+ ++I+     G ++EA  L++ M+ RGL PD FTYN+++ G
Sbjct: 213 LKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRG 272

Query: 308 YCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQT 367
            C  G +D A E+  ++  KGC+  V+SYNIL+         EE   L  ++ S      
Sbjct: 273 MCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPN 332

Query: 368 VITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFH 427
           V+TY+ L++ L + G+   A  L   MK   + PD  +Y+ LI   C+   +  A++   
Sbjct: 333 VVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLE 392

Query: 428 MLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKG 487
            +  +     I  +N ++  LCK G+ D A E+F KL + G  P   +Y+ M   L   G
Sbjct: 393 TMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSG 452

Query: 488 KLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTT 547
              +A   +L M  NG  P+ +T+N+++    +     +  ELL  M   E    P   T
Sbjct: 453 DKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCE--FHPSVVT 510

Query: 548 FSIVV 552
           ++IV+
Sbjct: 511 YNIVL 515



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 107/396 (27%), Positives = 191/396 (48%), Gaps = 9/396 (2%)

Query: 163 CRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGR 222
           CR+GN   +L L + MV   Y   +I  T +      + ++ K   V +  E F +    
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFGQ---- 155

Query: 223 GINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEA 282
              P V     LI+GFC     ++   +   M      P+ +T+N+MI  LC  GK++ A
Sbjct: 156 ---PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLA 212

Query: 283 NGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILING 342
             +L  ++     P   TY  L++   L G +D A ++   M S+G K  + +YN +I G
Sbjct: 213 LKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRG 272

Query: 343 YCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPD 402
            CK   V+ A  + R +   G    VI+YN LL  L   G+    +KL  +M     +P+
Sbjct: 273 MCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPN 332

Query: 403 LSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFH 462
           + TY+ILI  LC++  ++EA+ L  +++          ++ LI   C+ GRLD A E   
Sbjct: 333 VVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLE 392

Query: 463 KLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNN 522
            +   G +P +V Y+ ++  LC+ GK ++A +    + + GC+PN  ++NT+      + 
Sbjct: 393 TMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSG 452

Query: 523 KTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKD 558
              + + ++ +M      + PD+ T++ ++  L ++
Sbjct: 453 DKIRALHMILEMM--SNGIDPDEITYNSMISCLCRE 486



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 42/169 (24%), Positives = 71/169 (42%), Gaps = 30/169 (17%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
           N  L   CK+G    ++A   FG +  +  SP  SS+N +F A+  +      +    ++
Sbjct: 407 NTVLATLCKNG--KADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEM 464

Query: 102 VSIGLLPDFLTLNILINCFGNKER----------------------------GLCVENRI 133
           +S G+ PD +T N +I+C   +                              G C  +RI
Sbjct: 465 MSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRI 524

Query: 134 KEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGD 182
           ++A  + ++M+  G RP+  TY  LI G    G  + A+ L   +V  D
Sbjct: 525 EDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRID 573


>gi|115446945|ref|NP_001047252.1| Os02g0582300 [Oryza sativa Japonica Group]
 gi|50253069|dbj|BAD29317.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113536783|dbj|BAF09166.1| Os02g0582300 [Oryza sativa Japonica Group]
          Length = 845

 Score =  229 bits (583), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 146/523 (27%), Positives = 241/523 (46%), Gaps = 34/523 (6%)

Query: 60  RYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINC 119
           R F     H  P+P   ++N +  ++ +       + +   +V  G  PD  T N LI  
Sbjct: 138 RLFAHMHRHAPPAPTAPTYNAVIRSLCRRADLARALRYLSLMVRSGWRPDAYTFNSLIV- 196

Query: 120 FGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMV 179
                 G C  N++  A  LF  M   G   DV++Y TLI G C  G +  A+ L  +M 
Sbjct: 197 ------GYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGRIDEAVELFGEMD 250

Query: 180 SGDY----------------ENGLI---------SKTNIFSYSIIIDSLCKEGLVDKAKE 214
             D                 E GL+          + +  +Y+ ++D  C+E    +A+E
Sbjct: 251 QPDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCRERKAKEAEE 310

Query: 215 LFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLC 274
           +  EM  +G+ P VV CT +I+ +C  G   +   +   M   G +PN+ T+N ++   C
Sbjct: 311 MLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFC 370

Query: 275 KGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVV 334
             GK+++A  LL  M   G+NPD  TYN L+ G C+ G I++A  +   M   G      
Sbjct: 371 NEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQY 430

Query: 335 SYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEM 394
           +YN LIN  CK    ++A SL+  + + G++   +T+N+L++GL ++G+A  A K  ++M
Sbjct: 431 TYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKM 490

Query: 395 KLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRL 454
                 PD  TY+  I+ LCK    QE +     +     +     +  +I  L K    
Sbjct: 491 VSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNY 550

Query: 455 DNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTL 514
                 + ++   G  P VVTY+  +   C +G+L +A + L+ M KNG   + + +NTL
Sbjct: 551 GLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTL 610

Query: 515 MHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAK 557
           M G     +T   V +L +M       VP+  T+ I++  L +
Sbjct: 611 MDGHASIGQTDHAVSILKQMTSVAS--VPNQFTYFILLRHLVR 651



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 135/531 (25%), Positives = 239/531 (45%), Gaps = 40/531 (7%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           C++G I+  EA   FG M      P +  +  L   +      +  +   R++  +G  P
Sbjct: 234 CEAGRID--EAVELFGEMDQ----PDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRP 287

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
                  +++         C E + KEA  + + M   G+ P V+T   +IN +C+ G +
Sbjct: 288 STRAYAAVVDF-------RCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRM 340

Query: 169 SVALRLHKKM-VSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPA 227
           S ALR+ + M + G        K N+++Y+ ++   C EG V KA  L  +M+  G+NP 
Sbjct: 341 SDALRVLELMKLRG-------CKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPD 393

Query: 228 VVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLE 287
            V    LI G C  G+ E    L   M   G   +  T+N +I+ LCK G+ ++A  L +
Sbjct: 394 AVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFD 453

Query: 288 LMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKIL 347
            +  RG+ P+  T+NSL++G C  G+ D A +    M S GC     +Y+  I   CK+ 
Sbjct: 454 SLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMK 513

Query: 348 NVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYN 407
             +E +S   +++   V+ + + Y  ++  L +    G   + + EM      PD+ TY 
Sbjct: 514 GSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYT 573

Query: 408 ILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQK 467
             +   C    + EA  +   +  N        +N L+DG    G+ D+A  +  ++   
Sbjct: 574 TSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSV 633

Query: 468 GLVPTVVTYSIMIHGLCRK---------------GKLEKANDFLLY--MEKNGCAPNVVT 510
             VP   TY I++  L R                  +E  + F L+  M+KN   PN  T
Sbjct: 634 ASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGT 693

Query: 511 FNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKY 561
           +++++ GF ++ +T +   L+  M E   +L  ++  ++ +V    K ++Y
Sbjct: 694 YSSILEGFSEDGRTEEATSLVSLMKEDSISL--NEDIYTALVTCFCKSKRY 742



 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 129/510 (25%), Positives = 237/510 (46%), Gaps = 73/510 (14%)

Query: 105 GLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCR 164
           G  P+  T N L+       +G C E ++ +A  L   M A GV PD +TY  LI G C 
Sbjct: 354 GCKPNVWTYNALV-------QGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCI 406

Query: 165 TGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGI 224
            G++  A RL  +++ GD   GLI+  + ++Y+ +I++LCK+G  D+A  LF  ++ RGI
Sbjct: 407 DGHIESAFRL-LRLMEGD---GLIA--DQYTYNALINALCKDGRTDQACSLFDSLETRGI 460

Query: 225 NPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANG 284
            P  V   +LI+G C +G  +       +M+  G  P+  T++  I+ LCK     E   
Sbjct: 461 KPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLS 520

Query: 285 LLELMIQR-----------------------------------GLNPDRFTYNSLMDGYC 309
            +  M+Q+                                   G NPD  TY + M  YC
Sbjct: 521 FIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYC 580

Query: 310 LVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVI 369
           + GR++ A  + + M   G     ++YN L++G+  I   + A+S+ +Q+ S        
Sbjct: 581 IEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQF 640

Query: 370 TYNTLL-----------------SGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDG 412
           TY  LL                 +G+++A +      LFD MK     P+  TY+ +++G
Sbjct: 641 TYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEG 700

Query: 413 LCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPT 472
             ++   +EA  L  +++ +      +I+  L+   CK+ R  +AW L   + Q G +P 
Sbjct: 701 FSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPQ 760

Query: 473 VVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQ---NNKTSKVVE 529
           +++Y  ++ GL  +G+ +KA +  +       +P+ + +  ++ G ++   ++ + +++ 
Sbjct: 761 LMSYQHLLSGLICEGQTDKAKEIFMNSRWKDYSPDEIVWKVIIDGLIKKGHSDISREMII 820

Query: 530 LLHKMAEPERNLVPDDTTFSIVVDLLAKDE 559
           +L +M     N  P   T++++ + L   E
Sbjct: 821 MLERM-----NCRPSHQTYAMLTEELPDRE 845



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 92/312 (29%), Positives = 150/312 (48%), Gaps = 15/312 (4%)

Query: 259 PRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAR 318
           P P   T+N +I  LC+   +  A   L LM++ G  PD +T+NSL+ GYC   ++D AR
Sbjct: 149 PAPTAPTYNAVIRSLCRRADLARALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVAR 208

Query: 319 EIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGL 378
           ++F  M  +G    VVSY  LI G C+   ++EA+ L+ ++    +      Y  L+ GL
Sbjct: 209 DLFDKMPLRGFAQDVVSYATLIEGLCEAGRIDEAVELFGEMDQPDMHM----YAALVKGL 264

Query: 379 FQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGI 438
             A +      +   MK     P    Y  ++D  C+    +EA ++   +    FE G+
Sbjct: 265 CNAERGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEM----FEKGL 320

Query: 439 E--IFNC--LIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKAND 494
              +  C  +I+  CK GR+ +A  +   +  +G  P V TY+ ++ G C +GK+ KA  
Sbjct: 321 APCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMT 380

Query: 495 FLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDL 554
            L  M   G  P+ VT+N L+ G   +        LL  M      L+ D  T++ +++ 
Sbjct: 381 LLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLME--GDGLIADQYTYNALINA 438

Query: 555 LAKDEKYHE-CS 565
           L KD +  + CS
Sbjct: 439 LCKDGRTDQACS 450


>gi|218191892|gb|EEC74319.1| hypothetical protein OsI_09597 [Oryza sativa Indica Group]
          Length = 1167

 Score =  229 bits (583), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 159/547 (29%), Positives = 257/547 (46%), Gaps = 53/547 (9%)

Query: 57  NEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNIL 116
           NEA+     M+  +  P +  +  L     +  + D      +++V+ G+ P+ +T + L
Sbjct: 204 NEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNL 263

Query: 117 INCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHK 176
           +       RGLC   ++  A+ L K M+    RPD ITY  +I G  R  N   A RL  
Sbjct: 264 V-------RGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHNKKDAFRLLS 316

Query: 177 KMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIH 236
           +M     EN  IS  N+++YSI+I  LC+ G  +KA +L  EM  +G+ P   V   LI 
Sbjct: 317 EM-----ENAGISP-NVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLIS 370

Query: 237 GFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNP 296
           G+C  GN      +F +M  +   P+L  +N +I  L K G++ E+      M +RGL P
Sbjct: 371 GYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLP 430

Query: 297 DRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLY 356
           + FTY+ L+ GY   G +++A ++   M   G K   V Y  L+  Y K  ++E+  S +
Sbjct: 431 NEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTF 490

Query: 357 RQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKN 416
           + ++  GV      Y  L+  L  +G    A ++  E++     PD+  Y+ LI GLCK 
Sbjct: 491 KSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSEIEKNGSVPDVHVYSSLISGLCKT 550

Query: 417 NCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTY 476
              ++A  +   +     +  I  +N LIDGLCK+G +  A  +F+ +  KGLVP  VTY
Sbjct: 551 ADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTY 610

Query: 477 SIMIHGLCRKGKLEKANDFLLYME----------------KNGCA--------------- 505
           + +I G C+ G +  +N F LY E                  GC+               
Sbjct: 611 TSLIDGSCKVGDI--SNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEM 668

Query: 506 -----PNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEK 560
                 ++ +FN L+ GF +  K  + ++LLH +    R LVP+  T   ++  L++  K
Sbjct: 669 FLRGHASISSFNNLVDGFCKRGKMQETLKLLHVIM--GRGLVPNALTIENIISGLSEAGK 726

Query: 561 YHECSAV 567
             E   +
Sbjct: 727 LSEVHTI 733



 Score =  208 bits (529), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 142/523 (27%), Positives = 253/523 (48%), Gaps = 41/523 (7%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           C   + NL  A      M    PSPP+                  + S +R L   G   
Sbjct: 6   CAGSLFNL--ANGLLIKMIRAYPSPPV-----------------VLASIHRALSDSGHRS 46

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
             + L++L++ +  K+ G     R+++A  +   M   G+ P +     L+    R   +
Sbjct: 47  PAV-LDVLVDTY--KKSG-----RVQDAAEVVLMMRDRGLAPSIRCCNALLKDLLRADAM 98

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
           ++  ++ + MV      G     ++++YS +I++ CK    D AK++ +EM+ RG     
Sbjct: 99  ALLWKVREFMV------GAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNT 152

Query: 229 VVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLEL 288
           V    LI G C +G  EE  G   +M D G  P+  T+  +I+ LCK  + NEA  LL+ 
Sbjct: 153 VTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDE 212

Query: 289 MIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILN 348
           M    L P+   Y +L+DG+   G  D A ++   M + G +   ++Y+ L+ G CK+  
Sbjct: 213 MSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQ 272

Query: 349 VEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNI 408
           ++ A  L +Q++ +  R   ITYN ++ G F+      A +L  EM+   + P++ TY+I
Sbjct: 273 MDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSI 332

Query: 409 LIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKG 468
           +I GLC++   ++A  L   +     +    ++  LI G C+ G +  A E+F K+ +  
Sbjct: 333 MIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVN 392

Query: 469 LVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVV 528
           ++P +  Y+ +I GL + G++E++  +   M++ G  PN  T++ L+HG+L+N       
Sbjct: 393 VLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAE 452

Query: 529 ELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKSS 571
           +L+ +M +    L P+D    I +DLL   E Y +   + K S
Sbjct: 453 QLVQRMLDT--GLKPNDV---IYIDLL---ESYFKSDDIEKVS 487



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 144/523 (27%), Positives = 240/523 (45%), Gaps = 45/523 (8%)

Query: 44  FLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVS 103
            +H  C+SG     +A      MT     P    +  L     +  +       + K+  
Sbjct: 333 MIHGLCQSG--EPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTK 390

Query: 104 IGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFC 163
           + +LPD    N LI  FG  + G     R++E+T  F  M   G+ P+  TY  LI+G+ 
Sbjct: 391 VNVLPDLYCYNSLI--FGLSKVG-----RVEESTKYFAQMQERGLLPNEFTYSGLIHGYL 443

Query: 164 RTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRG 223
           + G+L  A +L ++M+    + GL  K N   Y  +++S  K   ++K    F  M  +G
Sbjct: 444 KNGDLESAEQLVQRML----DTGL--KPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQG 497

Query: 224 INPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEAN 283
           +     +   LIH    +GN E    +  E+   G  P++  ++ +I  LCK     +A 
Sbjct: 498 VMLDNRIYGILIHNLSSSGNMEAAFRVLSEIEKNGSVPDVHVYSSLISGLCKTADREKAF 557

Query: 284 GLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGY 343
           G+L+ M ++G++P+   YN+L+DG C  G I  AR +F S+ +KG     V+Y  LI+G 
Sbjct: 558 GILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGS 617

Query: 344 CKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDL 403
           CK+ ++  A  LY ++++ G+      Y+ L +G   AG    A  L +EM L      +
Sbjct: 618 CKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRG-HASI 676

Query: 404 STYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHK 463
           S++N L+DG CK   +QE +KL H++              +I GL +AG+L     +F +
Sbjct: 677 SSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVE 736

Query: 464 LPQK-------------------GLVPTVVTYSIMIHGLCRKGKLEKA---NDFLLYMEK 501
           L QK                   G +P  V    MI   C++G L+KA    D ++    
Sbjct: 737 LQQKTSESAARHFSSLFMDMINQGKIPLDVVDD-MIRDHCKEGNLDKALMLRDVIVAKSA 795

Query: 502 N-GCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVP 543
             GC+    ++  ++    +  K S+ + LL +M +   NL P
Sbjct: 796 PMGCS----SYLAIVDNLCRKGKLSEALNLLKEM-DKRGNLQP 833



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 84/332 (25%), Positives = 148/332 (44%), Gaps = 54/332 (16%)

Query: 273 LCKGGKINEANGLLELMIQRGLNP-------DRFTYNS----------LMDGYCLVGRID 315
           +C G   N ANGLL  MI+   +P        R   +S          L+D Y   GR+ 
Sbjct: 5   MCAGSLFNLANGLLIKMIRAYPSPPVVLASIHRALSDSGHRSPAVLDVLVDTYKKSGRVQ 64

Query: 316 TAREIFLSMHSKGCKHT-----------------------------------VVSYNILI 340
            A E+ L M  +G   +                                   V +Y+ LI
Sbjct: 65  DAAEVVLMMRDRGLAPSIRCCNALLKDLLRADAMALLWKVREFMVGAGISPDVYTYSTLI 124

Query: 341 NGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVE 400
             YCK+   + A  +  ++   G     +TYN L++GL ++G    A     +M+ Y + 
Sbjct: 125 EAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLV 184

Query: 401 PDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWEL 460
           PD  TY  LI+GLCK+    EA  L   +   + +  + ++  LIDG  + G  D A+++
Sbjct: 185 PDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKM 244

Query: 461 FHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQ 520
             ++   G+ P  +TY  ++ GLC+ G++++A+  L  M ++   P+ +T+N ++ G  +
Sbjct: 245 IKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFR 304

Query: 521 NNKTSKVVELLHKMAEPERNLVPDDTTFSIVV 552
           ++       LL +M      + P+  T+SI++
Sbjct: 305 HHNKKDAFRLLSEMENA--GISPNVYTYSIMI 334


>gi|302794530|ref|XP_002979029.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
 gi|300153347|gb|EFJ19986.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
          Length = 500

 Score =  229 bits (583), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 136/433 (31%), Positives = 222/433 (51%), Gaps = 9/433 (2%)

Query: 114 NILINCFGNKE--RGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVA 171
           NI  N F      + L  E + +E+  + + M+A G  PDV  +  ++ GF R+ N+  A
Sbjct: 5   NIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKA 64

Query: 172 LRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVC 231
             +++ MV   Y      K +  SY I+I  L K G +D++ ++  EM  RG  P++   
Sbjct: 65  REVYQHMVESGY------KPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAY 118

Query: 232 TTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQ 291
           ++L+     A   +  + LF EM+  G  P+ L F  +I  LC+ GK+ +A+   + M +
Sbjct: 119 SSLVRALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPK 178

Query: 292 RGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEE 351
            G  P+   YN L+ G C  G+++ A  +F  M S  C   VV+YN L++  CK   VEE
Sbjct: 179 HGCQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEE 238

Query: 352 AMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILID 411
              L+  + + G    VIT++TL+ GL + G+   A ++F  M     +P+  TY  LI 
Sbjct: 239 GCKLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLIS 298

Query: 412 GLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLP-QKGLV 470
           GLC+   V +A +LF  +           +N LI G CK G +D A +L+ ++    GL 
Sbjct: 299 GLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQ 358

Query: 471 PTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVEL 530
           PT+VT++ +I G C+ GKL +AN+ +  M   G A +  T+  L+ G  +  K  + +E+
Sbjct: 359 PTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADSCTYRILIAGLSRATKLDEALEV 418

Query: 531 LHKMAEPERNLVP 543
             +M E +  L P
Sbjct: 419 YKQMREKKFLLDP 431



 Score =  218 bits (556), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 131/468 (27%), Positives = 225/468 (48%), Gaps = 18/468 (3%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
           P + +FN +    A++ + +     Y+ +V  G  PD ++ +ILI+       GL    +
Sbjct: 43  PDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHILIH-------GLAKIGK 95

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
           + E+  +   M+  G  P +  Y +L+    +   +  A  L  +M+ G +         
Sbjct: 96  LDESLKILSEMVMRGQTPSMQAYSSLVRALAKARRVDHASSLFDEMIRGGHH-----PDR 150

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
           +  Y +I+  LC+ G V  A E F +M   G  P V V   L+HG C +G  E+ N LF 
Sbjct: 151 LMFYELIL-GLCQAGKVKDASERFKQMPKHGCQPNVPVYNVLLHGLCSSGQLEQANTLFA 209

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
           EM      P+++T+N ++D +CK  ++ E   L E M   G  P+  T+++L+ G C  G
Sbjct: 210 EMKSHSCSPDVVTYNTLLDAVCKARRVEEGCKLFEAMRAAGYVPNVITFSTLIHGLCRTG 269

Query: 313 RIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYN 372
            ++ A E+F SM   GCK    +Y  LI+G C+   V +A  L+ ++    +    + YN
Sbjct: 270 ELEKALEVFGSMLEAGCKPNKYTYTTLISGLCRAEKVIQARELFEKMTQACIPPDAVAYN 329

Query: 373 TLLSGLFQAGQAGYAQKLFDEMKL-YNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
           +L++G  + G    A+KL+ EM     ++P + T+N LIDG CK   +  A +L   +  
Sbjct: 330 SLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGT 389

Query: 432 NKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEK 491
                    +  LI GL +A +LD A E++ ++ +K  +   V+    + GLC+ G +++
Sbjct: 390 KGLAADSCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQ 449

Query: 492 ANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPER 539
           A        K+G  PN  TF  L    ++  +    VE   K+ EP +
Sbjct: 450 AYAVFEATRKSGAVPNPETFRILSESLIKLGR----VEDAQKLMEPAK 493



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 129/415 (31%), Positives = 205/415 (49%), Gaps = 38/415 (9%)

Query: 191 TNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGL 250
            N+F+YS II SL KE   +++ ++  EM   G NP V     ++ GF  + N E+   +
Sbjct: 8   ANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREV 67

Query: 251 FIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCL 310
           +  M++ G +P+ ++++++I  L K GK++E+  +L  M+ RG  P    Y+SL+     
Sbjct: 68  YQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSSLVRALAK 127

Query: 311 VGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVIT 370
             R+D A  +F  M   G     + +  LI G C+   V++A   ++Q+  +G +  V  
Sbjct: 128 ARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHGCQPNVPV 187

Query: 371 YNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLE 430
           YN LL GL  +GQ   A  LF EMK ++  PD+ TYN L+D +CK   V+E  KLF  + 
Sbjct: 188 YNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGCKLFEAMR 247

Query: 431 MNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLE 490
              +   +  F+ LI GLC+ G L+ A E+F  + + G  P   TY+ +I GLCR  K+ 
Sbjct: 248 AAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGLCRAEKVI 307

Query: 491 KANDFL---------------------------------LYMEKNGCA---PNVVTFNTL 514
           +A +                                   LY E +G A   P +VTFNTL
Sbjct: 308 QARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTL 367

Query: 515 MHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSK 569
           + GF +  K  +  EL+ +M    + L  D  T+ I++  L++  K  E   V K
Sbjct: 368 IDGFCKLGKLGRANELVAEMG--TKGLAADSCTYRILIAGLSRATKLDEALEVYK 420



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 95/334 (28%), Positives = 174/334 (52%), Gaps = 2/334 (0%)

Query: 219 MKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGK 278
           M+ + I   V   +++I         EE   +  EM+  G  P++  FN ++    +   
Sbjct: 1   MRDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNN 60

Query: 279 INEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNI 338
           + +A  + + M++ G  PD  +Y+ L+ G   +G++D + +I   M  +G   ++ +Y+ 
Sbjct: 61  MEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSS 120

Query: 339 LINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYN 398
           L+    K   V+ A SL+ ++I  G     + +  L+ GL QAG+   A + F +M  + 
Sbjct: 121 LVRALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHG 180

Query: 399 VEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAW 458
            +P++  YN+L+ GLC +  +++A  LF  ++ +     +  +N L+D +CKA R++   
Sbjct: 181 CQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGC 240

Query: 459 ELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGF 518
           +LF  +   G VP V+T+S +IHGLCR G+LEKA +    M + GC PN  T+ TL+ G 
Sbjct: 241 KLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGL 300

Query: 519 LQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVV 552
            +  K  +  EL  KM +    + PD   ++ ++
Sbjct: 301 CRAEKVIQARELFEKMTQA--CIPPDAVAYNSLI 332



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 106/352 (30%), Positives = 171/352 (48%), Gaps = 16/352 (4%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           C++G   + +A   F  M      P +  +N+L   +  +   +   + + ++ S    P
Sbjct: 161 CQAG--KVKDASERFKQMPKHGCQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSP 218

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           D +T N L++        +C   R++E   LF+ M A G  P+VIT+ TLI+G CRTG L
Sbjct: 219 DVVTYNTLLD-------AVCKARRVEEGCKLFEAMRAAGYVPNVITFSTLIHGLCRTGEL 271

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
             AL +   M+          K N ++Y+ +I  LC+   V +A+ELF +M    I P  
Sbjct: 272 EKALEVFGSMLEAG------CKPNKYTYTTLISGLCRAEKVIQARELFEKMTQACIPPDA 325

Query: 229 VVCTTLIHGFCCAGNWEEVNGLFIEMLD-LGPRPNLLTFNVMIDCLCKGGKINEANGLLE 287
           V   +LI G+C  G+ +E   L+ EM    G +P ++TFN +ID  CK GK+  AN L+ 
Sbjct: 326 VAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVA 385

Query: 288 LMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKIL 347
            M  +GL  D  TY  L+ G     ++D A E++  M  K      VS    + G CK  
Sbjct: 386 EMGTKGLAADSCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTG 445

Query: 348 NVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNV 399
           N+++A +++     +G      T+  L   L + G+   AQKL +  K  ++
Sbjct: 446 NIDQAYAVFEATRKSGAVPNPETFRILSESLIKLGRVEDAQKLMEPAKARDI 497


>gi|296088470|emb|CBI37461.3| unnamed protein product [Vitis vinifera]
          Length = 822

 Score =  228 bits (582), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 146/529 (27%), Positives = 264/529 (49%), Gaps = 50/529 (9%)

Query: 59  ARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILIN 118
           A  FF  M    PSP + +F+ L     K    D   S Y  ++  G++PD +  +ILIN
Sbjct: 259 ASDFFDMMVRSGPSPNLVTFSTLINVYCKELRLDEAFSLYNLMIEKGIVPDLVIYSILIN 318

Query: 119 CFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKM 178
                  GL    +++E   LF   +A GV+ DV+ + ++++ + R G+L  A+ ++ +M
Sbjct: 319 -------GLFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRM 371

Query: 179 VSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGF 238
           +    + G+    N+ +YSI+I+ LC+ G V +A  +F ++  +G+ P+V+  ++LI GF
Sbjct: 372 L----KEGI--SPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGF 425

Query: 239 CCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDR 298
           C + N  +  GL+  ML  G  P+++  +++I+ L + G ++EA       ++RGL  + 
Sbjct: 426 CKSENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNN 485

Query: 299 FTYNSLMDG-------------YCLV----------------------GRIDTAREIFLS 323
           + +N+L+DG             Y L+                      GR+D A  +F  
Sbjct: 486 YLFNALIDGCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQ 545

Query: 324 MHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQ 383
           +  KG     + Y  LI+G+CK  +    + +++ + SNG+   +  YN L++  F+ G 
Sbjct: 546 LLKKGFSPDHIIYCTLIDGFCKKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFREGC 605

Query: 384 AGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNC 443
                +L  E+  Y +EPD+ TYN +I G C      +A+KLF +L+  + +     F  
Sbjct: 606 VENVLELLREIIKYGLEPDIVTYNTMICGYCSLKIFSKAIKLFEVLKCGRTQPNAITFTI 665

Query: 444 LIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNG 503
           LID  CK GR+D+A  +F  + ++G  P ++TYS +I G  +    E A +    M  + 
Sbjct: 666 LIDAYCKDGRMDDAMLIFSSMLERGPEPNILTYSCLIDGYFKTENTESAFELYEKMLGDR 725

Query: 504 CAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVV 552
            +PN+V+++ L+ G  +     +    L       R+L+PD   + I++
Sbjct: 726 VSPNIVSYSILIDGLCKKGLMEEAS--LAFQCAIGRHLLPDVIAYGILI 772



 Score =  224 bits (571), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 150/566 (26%), Positives = 276/566 (48%), Gaps = 47/566 (8%)

Query: 35  SSPETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPS---------------------- 72
           S+P T  +  LH  C++G+++   A   F +M+ M  S                      
Sbjct: 137 SNPSTVYSFLLHCYCRNGMVD--RAVDTFAWMSKMGVSISHYAASEMLDLLIDSDRIDVI 194

Query: 73  --------PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKE 124
                     +  +  +F +  K    +  ++F+R LV  GL+P  +  N ++       
Sbjct: 195 LENYEEMCKGLGVYEFVFNSFLKRGEVEKGLNFHRALVERGLVPKIVDCNKIL------- 247

Query: 125 RGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYE 184
           +GLC+ N+I  A+  F  M+  G  P+++T+ TLIN +C+   L  A  L+  M+    E
Sbjct: 248 KGLCMGNQIGVASDFFDMMVRSGPSPNLVTFSTLINVYCKELRLDEAFSLYNLMI----E 303

Query: 185 NGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNW 244
            G++    I  YSI+I+ L + G +++   LF     RG+   VV+ ++++  +   G+ 
Sbjct: 304 KGIVPDLVI--YSILINGLFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDL 361

Query: 245 EEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSL 304
            +   ++  ML  G  PN++T++++I+ LC+ G++ EA G+   ++++GL P   TY+SL
Sbjct: 362 GKAIEVYTRMLKEGISPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSL 421

Query: 305 MDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGV 364
           +DG+C    +     ++  M  KG    VV  ++LING  +   ++EA+  + Q +  G+
Sbjct: 422 IDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGL 481

Query: 365 RQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVK 424
                 +N L+ G F+  +     K++  M +Y V PD+ TY +L+ GL +   + EA+ 
Sbjct: 482 TLNNYLFNALIDGCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALA 541

Query: 425 LFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLC 484
           LF  L    F     I+  LIDG CK        ++F  +   G+ P +  Y+++I+   
Sbjct: 542 LFFQLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFF 601

Query: 485 RKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPD 544
           R+G +E   + L  + K G  P++VT+NT++ G+      SK ++L   +        P+
Sbjct: 602 REGCVENVLELLREIIKYGLEPDIVTYNTMICGYCSLKIFSKAIKLFEVLKCGRTQ--PN 659

Query: 545 DTTFSIVVDLLAKDEKYHECSAVSKS 570
             TF+I++D   KD +  +   +  S
Sbjct: 660 AITFTILIDAYCKDGRMDDAMLIFSS 685



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 113/432 (26%), Positives = 212/432 (49%), Gaps = 39/432 (9%)

Query: 166 GNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGIN 225
           GNL V    H     G + N   + + +  YS ++   C+ G+VD+A + F  M   G++
Sbjct: 120 GNLEVLGEFH-----GSFRNYGSNPSTV--YSFLLHCYCRNGMVDRAVDTFAWMSKMGVS 172

Query: 226 PAVVVCTTLI------------------------------HGFCCAGNWEEVNGLFIEML 255
            +    + ++                              + F   G  E+       ++
Sbjct: 173 ISHYAASEMLDLLIDSDRIDVILENYEEMCKGLGVYEFVFNSFLKRGEVEKGLNFHRALV 232

Query: 256 DLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRID 315
           + G  P ++  N ++  LC G +I  A+   ++M++ G +P+  T+++L++ YC   R+D
Sbjct: 233 ERGLVPKIVDCNKILKGLCMGNQIGVASDFFDMMVRSGPSPNLVTFSTLINVYCKELRLD 292

Query: 316 TAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLL 375
            A  ++  M  KG    +V Y+ILING  +   +EE  SL+   ++ GV+  V+ +++++
Sbjct: 293 EAFSLYNLMIEKGIVPDLVIYSILINGLFRAGKLEEGNSLFSMALARGVKMDVVIFSSIM 352

Query: 376 SGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFE 435
               + G  G A +++  M    + P++ TY+ILI+GLC+N  V EA  +F  +     E
Sbjct: 353 DAYVRVGDLGKAIEVYTRMLKEGISPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLE 412

Query: 436 FGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDF 495
             +  ++ LIDG CK+  L + + L+  + +KG VP VV  S++I+GL R+G +++A  F
Sbjct: 413 PSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRF 472

Query: 496 LLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLL 555
                K G   N   FN L+ G  +  +T   +++   M   +  ++PD  T++++V  L
Sbjct: 473 FFQAVKRGLTLNNYLFNALIDGCFRLKRTRDGLKMYILMGMYK--VIPDVVTYTVLVKGL 530

Query: 556 AKDEKYHECSAV 567
           A+  +  E  A+
Sbjct: 531 AEQGRLDEALAL 542



 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 113/383 (29%), Positives = 183/383 (47%), Gaps = 38/383 (9%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CKS   NL +    +G M      P +   ++L   +++    D  + F+ + V  GL  
Sbjct: 426 CKSE--NLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTL 483

Query: 109 DFLTLNILIN-CFGNKE---------------------------RGLCVENRIKEATWLF 140
           +    N LI+ CF  K                            +GL  + R+ EA  LF
Sbjct: 484 NNYLFNALIDGCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALF 543

Query: 141 KNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIII 200
             ++  G  PD I Y TLI+GFC+  + +  L++ K M S    NG+     I  Y+++I
Sbjct: 544 FQLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQIFKLMQS----NGIFPDICI--YNVLI 597

Query: 201 DSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLG-P 259
           +   +EG V+   EL  E+   G+ P +V   T+I G+C    + +   LF E+L  G  
Sbjct: 598 NMFFREGCVENVLELLREIIKYGLEPDIVTYNTMICGYCSLKIFSKAIKLF-EVLKCGRT 656

Query: 260 RPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTARE 319
           +PN +TF ++ID  CK G++++A  +   M++RG  P+  TY+ L+DGY      ++A E
Sbjct: 657 QPNAITFTILIDAYCKDGRMDDAMLIFSSMLERGPEPNILTYSCLIDGYFKTENTESAFE 716

Query: 320 IFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLF 379
           ++  M        +VSY+ILI+G CK   +EEA   ++  I   +   VI Y  L+ G  
Sbjct: 717 LYEKMLGDRVSPNIVSYSILIDGLCKKGLMEEASLAFQCAIGRHLLPDVIAYGILIRGYC 776

Query: 380 QAGQAGYAQKLFDEMKLYNVEPD 402
           + G+   A  L+D M +  + PD
Sbjct: 777 KVGRLAEAMMLYDHMLVNGIMPD 799


>gi|357485461|ref|XP_003613018.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355514353|gb|AES95976.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 894

 Score =  228 bits (582), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 153/536 (28%), Positives = 269/536 (50%), Gaps = 52/536 (9%)

Query: 54  INLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTL 113
           ++ +EAR+    +TH + S  ++S+N LF  +++    D +   ++ +++ G+ P+ ++ 
Sbjct: 134 VSSHEARFVLNLLTHHEFSLSVTSYNRLFMVLSRFGLIDELNCLFKDMLNDGVEPNLISF 193

Query: 114 NILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALR 173
           N ++N         C    +  A   F  ++ FG   D  TY +LI G+C+   L  A +
Sbjct: 194 NTMVN-------AHCKIGNVVVAKAYFCGLMKFGFCCDSFTYTSLILGYCKIHELGDAYK 246

Query: 174 LHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTT 233
           + + M     + G +   N  SY+ +I   C+ G +D+A ELF +MK  G  P V   T 
Sbjct: 247 VFEIMP----QEGCLR--NEVSYTNLIHGFCEVGKIDEALELFFQMKEDGCFPDVPTYTV 300

Query: 234 LIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRG 293
           L+  FC  G   E    F EM++ G  PN+ T+ V+ID  CK GK++E   +L  M+++G
Sbjct: 301 LVAAFCEVGKETEALKFFEEMVENGIEPNVYTYTVLIDYFCKVGKMDEGMEMLSTMLEKG 360

Query: 294 LNPDRFTYNSLMDGYCLVGRIDTAREIFLSMH-SKGCKHTVVSYNILINGYCKILNVEEA 352
           L      +N+L+DGYC  G ++ A  +  SM  +K C ++  +YN LI G+C+  +++ A
Sbjct: 361 LVSSVVPFNALIDGYCKRGMMEDAICVLDSMKLNKVCPNS-RTYNELICGFCRKKSMDRA 419

Query: 353 MSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDG 412
           M+L  ++  N +   ++TYNTL+ GL +A     A +L   M      PD  T+   ID 
Sbjct: 420 MALLNKMYENKLSPNLVTYNTLIHGLCKARVVDSAWRLHHLMIKDGFVPDQRTFCAFIDC 479

Query: 413 LCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPT 472
           LCK   V++A ++F  L+    E    ++  LIDG CKA +  +A  LF ++  +G  P 
Sbjct: 480 LCKMGKVEQAHQVFESLKEKHAEANEFLYTALIDGYCKAEKFSDAHLLFKRMLFEGCFPN 539

Query: 473 VVTYSIMIHGLCRKGKLE-----------------------------------KANDFLL 497
            +T+++++ GL ++GK+E                                   +AN FL 
Sbjct: 540 SITFNVLLDGLRKEGKVEDAMSLVDVMGKFDAKPTVHTYTILIEEILRESDFDRANMFLD 599

Query: 498 YMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
            M  +GC PNVVT+   +  + +  +  +  E++ K+   E  ++ D   + ++V+
Sbjct: 600 QMISSGCQPNVVTYTAFIKAYCRQGRLLEAEEMVVKIK--EEGILLDSFIYDVLVN 653



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 122/441 (27%), Positives = 216/441 (48%), Gaps = 14/441 (3%)

Query: 75  ISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIK 134
           +S  NL+ G     +  D  +  + ++   G  PD  T  +L+  F       C   +  
Sbjct: 261 VSYTNLIHGFCEVGK-IDEALELFFQMKEDGCFPDVPTYTVLVAAF-------CEVGKET 312

Query: 135 EATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIF 194
           EA   F+ M+  G+ P+V TY  LI+ FC+ G +   +    +M+S   E GL+S  ++ 
Sbjct: 313 EALKFFEEMVENGIEPNVYTYTVLIDYFCKVGKMDEGM----EMLSTMLEKGLVS--SVV 366

Query: 195 SYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEM 254
            ++ +ID  CK G+++ A  +   MK   + P       LI GFC   + +    L  +M
Sbjct: 367 PFNALIDGYCKRGMMEDAICVLDSMKLNKVCPNSRTYNELICGFCRKKSMDRAMALLNKM 426

Query: 255 LDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRI 314
            +    PNL+T+N +I  LCK   ++ A  L  LMI+ G  PD+ T+ + +D  C +G++
Sbjct: 427 YENKLSPNLVTYNTLIHGLCKARVVDSAWRLHHLMIKDGFVPDQRTFCAFIDCLCKMGKV 486

Query: 315 DTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTL 374
           + A ++F S+  K  +     Y  LI+GYCK     +A  L+++++  G     IT+N L
Sbjct: 487 EQAHQVFESLKEKHAEANEFLYTALIDGYCKAEKFSDAHLLFKRMLFEGCFPNSITFNVL 546

Query: 375 LSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKF 434
           L GL + G+   A  L D M  ++ +P + TY ILI+ + + +    A      +  +  
Sbjct: 547 LDGLRKEGKVEDAMSLVDVMGKFDAKPTVHTYTILIEEILRESDFDRANMFLDQMISSGC 606

Query: 435 EFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKAND 494
           +  +  +   I   C+ GRL  A E+  K+ ++G++     Y ++++     G+L+ A  
Sbjct: 607 QPNVVTYTAFIKAYCRQGRLLEAEEMVVKIKEEGILLDSFIYDVLVNAYGCIGQLDSAFG 666

Query: 495 FLLYMEKNGCAPNVVTFNTLM 515
            L+ M   GC P+  T++ L+
Sbjct: 667 VLIRMFDTGCEPSRQTYSILL 687



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 135/536 (25%), Positives = 238/536 (44%), Gaps = 49/536 (9%)

Query: 38  ETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISF 97
           E      +H  C+ G I+  EA   F  M      P + ++ +L  A  +       + F
Sbjct: 260 EVSYTNLIHGFCEVGKID--EALELFFQMKEDGCFPDVPTYTVLVAAFCEVGKETEALKF 317

Query: 98  YRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGT 157
           + ++V  G+ P+  T  +LI+ F       C   ++ E   +   M+  G+   V+ +  
Sbjct: 318 FEEMVENGIEPNVYTYTVLIDYF-------CKVGKMDEGMEMLSTMLEKGLVSSVVPFNA 370

Query: 158 LINGFCRTGNLSVALRLHKKMVSGDYENGLISKT--NIFSYSIIIDSLCKEGLVDKAKEL 215
           LI+G+C+ G +  A+ +   M         ++K   N  +Y+ +I   C++  +D+A  L
Sbjct: 371 LIDGYCKRGMMEDAICVLDSMK--------LNKVCPNSRTYNELICGFCRKKSMDRAMAL 422

Query: 216 FLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCK 275
             +M    ++P +V   TLIHG C A   +    L   M+  G  P+  TF   IDCLCK
Sbjct: 423 LNKMYENKLSPNLVTYNTLIHGLCKARVVDSAWRLHHLMIKDGFVPDQRTFCAFIDCLCK 482

Query: 276 GGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVS 335
            GK+ +A+ + E + ++    + F Y +L+DGYC   +   A  +F  M  +GC    ++
Sbjct: 483 MGKVEQAHQVFESLKEKHAEANEFLYTALIDGYCKAEKFSDAHLLFKRMLFEGCFPNSIT 542

Query: 336 YNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMK 395
           +N+L++G  K   VE+AMSL   +     + TV TY  L+  + +      A    D+M 
Sbjct: 543 FNVLLDGLRKEGKVEDAMSLVDVMGKFDAKPTVHTYTILIEEILRESDFDRANMFLDQMI 602

Query: 396 LYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLD 455
               +P++ TY   I   C+   + EA ++   ++         I++ L++     G+LD
Sbjct: 603 SSGCQPNVVTYTAFIKAYCRQGRLLEAEEMVVKIKEEGILLDSFIYDVLVNAYGCIGQLD 662

Query: 456 NAWELFHKLPQKGLVPTVVTYSIMIHGL--------------------CRKGKLEKANDF 495
           +A+ +  ++   G  P+  TYSI++  L                         + K  DF
Sbjct: 663 SAFGVLIRMFDTGCEPSRQTYSILLKHLIFEKYNKEGMGLDLNSTNISVDNANIWKIADF 722

Query: 496 ----LLY--MEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAE----PERNL 541
               +L+  M + GC PNV T++ L+ G  +    S    L + M E    P  N+
Sbjct: 723 EIITMLFEKMVEQGCVPNVNTYSKLIKGLCKVEHLSLAFRLFNHMKESGISPSENI 778



 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 101/380 (26%), Positives = 189/380 (49%), Gaps = 6/380 (1%)

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
           ++ SY+ +   L + GL+D+   LF +M   G+ P ++   T+++  C  GN       F
Sbjct: 154 SVTSYNRLFMVLSRFGLIDELNCLFKDMLNDGVEPNLISFNTMVNAHCKIGNVVVAKAYF 213

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
             ++  G   +  T+  +I   CK  ++ +A  + E+M Q G   +  +Y +L+ G+C V
Sbjct: 214 CGLMKFGFCCDSFTYTSLILGYCKIHELGDAYKVFEIMPQEGCLRNEVSYTNLIHGFCEV 273

Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
           G+ID A E+F  M   GC   V +Y +L+  +C++    EA+  + +++ NG+   V TY
Sbjct: 274 GKIDEALELFFQMKEDGCFPDVPTYTVLVAAFCEVGKETEALKFFEEMVENGIEPNVYTY 333

Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
             L+    + G+     ++   M    +   +  +N LIDG CK   +++A+ +   +++
Sbjct: 334 TVLIDYFCKVGKMDEGMEMLSTMLEKGLVSSVVPFNALIDGYCKRGMMEDAICVLDSMKL 393

Query: 432 NKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEK 491
           NK       +N LI G C+   +D A  L +K+ +  L P +VTY+ +IHGLC+   ++ 
Sbjct: 394 NKVCPNSRTYNELICGFCRKKSMDRAMALLNKMYENKLSPNLVTYNTLIHGLCKARVVDS 453

Query: 492 ANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEP--ERNLVPDDTTFS 549
           A      M K+G  P+  TF   +    +  K    VE  H++ E   E++   ++  ++
Sbjct: 454 AWRLHHLMIKDGFVPDQRTFCAFIDCLCKMGK----VEQAHQVFESLKEKHAEANEFLYT 509

Query: 550 IVVDLLAKDEKYHECSAVSK 569
            ++D   K EK+ +   + K
Sbjct: 510 ALIDGYCKAEKFSDAHLLFK 529



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 119/478 (24%), Positives = 219/478 (45%), Gaps = 43/478 (8%)

Query: 55  NLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLN 114
           +++ A      M   + SP + ++N L   + K R  D+    +  ++  G +PD  T  
Sbjct: 415 SMDRAMALLNKMYENKLSPNLVTYNTLIHGLCKARVVDSAWRLHHLMIKDGFVPDQRTFC 474

Query: 115 ILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRL 174
             I+C       LC   ++++A  +F+++       +   Y  LI+G+C+    S A  L
Sbjct: 475 AFIDC-------LCKMGKVEQAHQVFESLKEKHAEANEFLYTALIDGYCKAEKFSDAHLL 527

Query: 175 HKKMV-SGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTT 233
            K+M+  G + N +       ++++++D L KEG V+ A  L   M      P V   T 
Sbjct: 528 FKRMLFEGCFPNSI-------TFNVLLDGLRKEGKVEDAMSLVDVMGKFDAKPTVHTYTI 580

Query: 234 LIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRG 293
           LI       +++  N    +M+  G +PN++T+   I   C+ G++ EA  ++  + + G
Sbjct: 581 LIEEILRESDFDRANMFLDQMISSGCQPNVVTYTAFIKAYCRQGRLLEAEEMVVKIKEEG 640

Query: 294 LNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILIN------------ 341
           +  D F Y+ L++ Y  +G++D+A  + + M   GC+ +  +Y+IL+             
Sbjct: 641 ILLDSFIYDVLVNAYGCIGQLDSAFGVLIRMFDTGCEPSRQTYSILLKHLIFEKYNKEGM 700

Query: 342 --------------GYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYA 387
                            KI + E    L+ +++  G    V TY+ L+ GL +      A
Sbjct: 701 GLDLNSTNISVDNANIWKIADFEIITMLFEKMVEQGCVPNVNTYSKLIKGLCKVEHLSLA 760

Query: 388 QKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFH-MLEMNKFEFGIEIFNCLID 446
            +LF+ MK   + P  + +N L+   CK    +EA++L   M+E N     +E +  L+ 
Sbjct: 761 FRLFNHMKESGISPSENIHNSLLSSCCKLGMHEEALRLLDSMMEYNHLA-HLESYKLLVC 819

Query: 447 GLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGC 504
           GL + G  + A E+F  L   G     V + +++ GL RKG +++ +     MEK GC
Sbjct: 820 GLFEQGNQEKAEEIFRSLLSCGYNYDEVVWKVLLDGLVRKGYVDECSQLRDIMEKTGC 877



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 84/313 (26%), Positives = 142/313 (45%), Gaps = 37/313 (11%)

Query: 280 NEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNIL 339
           +EA  +L L+     +    +YN L       G ID    +F  M + G +  ++S+N +
Sbjct: 137 HEARFVLNLLTHHEFSLSVTSYNRLFMVLSRFGLIDELNCLFKDMLNDGVEPNLISFNTM 196

Query: 340 IN-----------------------------------GYCKILNVEEAMSLYRQIISNGV 364
           +N                                   GYCKI  + +A  ++  +   G 
Sbjct: 197 VNAHCKIGNVVVAKAYFCGLMKFGFCCDSFTYTSLILGYCKIHELGDAYKVFEIMPQEGC 256

Query: 365 RQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVK 424
            +  ++Y  L+ G  + G+   A +LF +MK     PD+ TY +L+   C+     EA+K
Sbjct: 257 LRNEVSYTNLIHGFCEVGKIDEALELFFQMKEDGCFPDVPTYTVLVAAFCEVGKETEALK 316

Query: 425 LFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLC 484
            F  +  N  E  +  +  LID  CK G++D   E+   + +KGLV +VV ++ +I G C
Sbjct: 317 FFEEMVENGIEPNVYTYTVLIDYFCKVGKMDEGMEMLSTMLEKGLVSSVVPFNALIDGYC 376

Query: 485 RKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPD 544
           ++G +E A   L  M+ N   PN  T+N L+ GF +     + + LL+KM   E  L P+
Sbjct: 377 KRGMMEDAICVLDSMKLNKVCPNSRTYNELICGFCRKKSMDRAMALLNKMY--ENKLSPN 434

Query: 545 DTTFSIVVDLLAK 557
             T++ ++  L K
Sbjct: 435 LVTYNTLIHGLCK 447



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 91/405 (22%), Positives = 165/405 (40%), Gaps = 42/405 (10%)

Query: 20  KLSSLFKSPRQIAAVSSPETQLNEFLHENCKSGIIN---LNEARYFFGYMTHMQPSPPIS 76
           K+  + ++ +   ++     + NEFL+     G       ++A   F  M      P   
Sbjct: 482 KMGKVEQAHQVFESLKEKHAEANEFLYTALIDGYCKAEKFSDAHLLFKRMLFEGCFPNSI 541

Query: 77  SFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEA 136
           +FN+L   + K    +  +S    +      P   T  ILI         +  E+    A
Sbjct: 542 TFNVLLDGLRKEGKVEDAMSLVDVMGKFDAKPTVHTYTILI-------EEILRESDFDRA 594

Query: 137 TWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSY 196
                 MI+ G +P+V+TY   I  +CR G L  A    ++MV    E G++  +  F Y
Sbjct: 595 NMFLDQMISSGCQPNVVTYTAFIKAYCRQGRLLEA----EEMVVKIKEEGILLDS--FIY 648

Query: 197 SIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCA--------------- 241
            +++++    G +D A  + + M   G  P+    + L+                     
Sbjct: 649 DVLVNAYGCIGQLDSAFGVLIRMFDTGCEPSRQTYSILLKHLIFEKYNKEGMGLDLNSTN 708

Query: 242 -----------GNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMI 290
                       ++E +  LF +M++ G  PN+ T++ +I  LCK   ++ A  L   M 
Sbjct: 709 ISVDNANIWKIADFEIITMLFEKMVEQGCVPNVNTYSKLIKGLCKVEHLSLAFRLFNHMK 768

Query: 291 QRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVE 350
           + G++P    +NSL+   C +G  + A  +  SM        + SY +L+ G  +  N E
Sbjct: 769 ESGISPSENIHNSLLSSCCKLGMHEEALRLLDSMMEYNHLAHLESYKLLVCGLFEQGNQE 828

Query: 351 EAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMK 395
           +A  ++R ++S G     + +  LL GL + G      +L D M+
Sbjct: 829 KAEEIFRSLLSCGYNYDEVVWKVLLDGLVRKGYVDECSQLRDIME 873


>gi|226501158|ref|NP_001146427.1| uncharacterized protein LOC100280009 [Zea mays]
 gi|219887141|gb|ACL53945.1| unknown [Zea mays]
          Length = 522

 Score =  228 bits (582), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 139/489 (28%), Positives = 248/489 (50%), Gaps = 20/489 (4%)

Query: 108 PDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGN 167
           PD  + N++I        GL    +  +A  +F  M+  GV P+ ITY T+I+G  + G+
Sbjct: 14  PDAFSYNVVI-------AGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGD 66

Query: 168 LSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPA 227
           L    RL  +M+     +G   K NI +Y++++  LC+ G +D+ + L  EM    + P 
Sbjct: 67  LEAGFRLRDQML----HDG--PKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPD 120

Query: 228 VVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLE 287
               + L  G    G    +  LF E L  G      T +++++ LCK GK+ +A  +LE
Sbjct: 121 GFTYSILFDGLTRTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLE 180

Query: 288 LMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKIL 347
           +++  GL P    YN+L++GYC V  +  A  IF  M S+  +   ++YN LING CK+ 
Sbjct: 181 MLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLE 240

Query: 348 NVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYN 407
            V +A  L  ++  +GV  +V T+NTL+     AGQ      +  +M+   ++ D+ ++ 
Sbjct: 241 MVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFG 300

Query: 408 ILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQK 467
            ++   CKN  + EAV +   +         +++N +ID   ++G  + A+ L  K+   
Sbjct: 301 SVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNS 360

Query: 468 GLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKV 527
           G+  ++VTY++++ GLCR  ++++A + +  +   G  P+VV++NT++        T K 
Sbjct: 361 GVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKA 420

Query: 528 VELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKSSYRACLYVTIFQPSSL- 586
           +ELL +M   +  + P   T+  +V  LA   + H+   +    Y+  L+  +   SS+ 
Sbjct: 421 LELLQEMN--KYGIRPTLRTYHTLVSALASAGRVHDMECL----YQQMLHKNVEPSSSIY 474

Query: 587 GSMIGCTVR 595
           G M+   VR
Sbjct: 475 GIMVDAYVR 483



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 125/503 (24%), Positives = 246/503 (48%), Gaps = 23/503 (4%)

Query: 71  PSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCF---GNKERGL 127
           P P   S+N++   + ++      +  + ++V +G++P+++T N +I+     G+ E G 
Sbjct: 12  PPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGF 71

Query: 128 CVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGD-YENG 186
               R+++       M+  G +P+++TY  L++G CR G +     L  +M S   + +G
Sbjct: 72  ----RLRD------QMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDG 121

Query: 187 LISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEE 246
                  F+YSI+ D L + G       LF E   +G+      C+ L++G C  G   +
Sbjct: 122 -------FTYSILFDGLTRTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAK 174

Query: 247 VNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMD 306
              +   ++  G  P  + +N +I+  C+   +  A  + E M  R + PD  TYN+L++
Sbjct: 175 AEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALIN 234

Query: 307 GYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQ 366
           G C +  +  A ++ + M   G   +V ++N LI+ Y     +E+  ++   +   G++ 
Sbjct: 235 GLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKS 294

Query: 367 TVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLF 426
            VI++ +++    + G+   A  + D+M   +V P+   YN +ID   ++   ++A  L 
Sbjct: 295 DVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLV 354

Query: 427 HMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRK 486
             ++ +     I  +N L+ GLC++ ++D A EL + L  +GL P VV+Y+ +I   C K
Sbjct: 355 EKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNK 414

Query: 487 GKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDT 546
           G  +KA + L  M K G  P + T++TL+       +   +  L  +M    +N+ P  +
Sbjct: 415 GDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQML--HKNVEPSSS 472

Query: 547 TFSIVVDLLAKDEKYHECSAVSK 569
            + I+VD   + E   + +++ K
Sbjct: 473 IYGIMVDAYVRCENDSKVASLKK 495



 Score =  205 bits (522), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 128/493 (25%), Positives = 235/493 (47%), Gaps = 15/493 (3%)

Query: 57  NEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNIL 116
           ++A   F  M  M   P   ++N +     K    +A      +++  G  P+ +T N+L
Sbjct: 33  SDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNIVTYNVL 92

Query: 117 INCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHK 176
           ++       GLC   R+ E   L   M +  + PD  TY  L +G  RTG     L L  
Sbjct: 93  LS-------GLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRTGESRTMLSLFA 145

Query: 177 KMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIH 236
           + +    + G++     ++ SI+++ LCK+G V KA+++   +   G+ P  V+  TLI+
Sbjct: 146 ESL----KKGVM--LGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLIN 199

Query: 237 GFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNP 296
           G+C   +      +F +M     RP+ +T+N +I+ LCK   + +A  L+  M + G++P
Sbjct: 200 GYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDP 259

Query: 297 DRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLY 356
              T+N+L+D Y   G+++    +   M  KG K  V+S+  ++  +CK   + EA+++ 
Sbjct: 260 SVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAIL 319

Query: 357 RQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKN 416
             +I   V      YN+++    ++G    A  L ++MK   V   + TYN+L+ GLC++
Sbjct: 320 DDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRS 379

Query: 417 NCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTY 476
           + + EA +L + L        +  +N +I   C  G  D A EL  ++ + G+ PT+ TY
Sbjct: 380 SQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTY 439

Query: 477 SIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAE 536
             ++  L   G++         M      P+   +  ++  +++    SKV  L  +M+ 
Sbjct: 440 HTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEMS- 498

Query: 537 PERNLVPDDTTFS 549
            E+ +  DDT  S
Sbjct: 499 -EKGIAFDDTKRS 510



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 112/429 (26%), Positives = 212/429 (49%), Gaps = 15/429 (3%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
           N  L   C++G   ++E R     M      P   ++++LF  + +      ++S + + 
Sbjct: 90  NVLLSGLCRAG--RMDETRVLMDEMASHSMFPDGFTYSILFDGLTRTGESRTMLSLFAES 147

Query: 102 VSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLING 161
           +  G++    T +IL+N       GLC + ++ +A  + + ++  G+ P  + Y TLING
Sbjct: 148 LKKGVMLGAYTCSILLN-------GLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLING 200

Query: 162 FCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKG 221
           +C+  +L  A  + ++M S         + +  +Y+ +I+ LCK  +V KA++L +EM+ 
Sbjct: 201 YCQVRDLRGAFCIFEQMKSRHI------RPDHITYNALINGLCKLEMVTKAEDLVMEMEK 254

Query: 222 RGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINE 281
            G++P+V    TLI  +  AG  E+   +  +M   G + ++++F  ++   CK GKI E
Sbjct: 255 SGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPE 314

Query: 282 ANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILIN 341
           A  +L+ MI + + P+   YNS++D Y   G  + A  +   M + G   ++V+YN+L+ 
Sbjct: 315 AVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLK 374

Query: 342 GYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEP 401
           G C+   ++EA  L   + + G+R  V++YNT++S     G    A +L  EM  Y + P
Sbjct: 375 GLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRP 434

Query: 402 DLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELF 461
            L TY+ L+  L     V +   L+  +     E    I+  ++D   +         L 
Sbjct: 435 TLRTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASLK 494

Query: 462 HKLPQKGLV 470
            ++ +KG+ 
Sbjct: 495 KEMSEKGIA 503


>gi|222615488|gb|EEE51620.1| hypothetical protein OsJ_32898 [Oryza sativa Japonica Group]
          Length = 822

 Score =  228 bits (582), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 141/488 (28%), Positives = 242/488 (49%), Gaps = 15/488 (3%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
           P ++  N L   + + R +D     Y +++      D  +  +L+       RGLC+E R
Sbjct: 167 PEVTHCNRLLKLLVEQRRWDDARKLYDEMLGEDSGADNYSTCVLV-------RGLCLEGR 219

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
           ++E   L +     G  P V+ Y  LI+G+CR G++   L L  +M +  +   L++   
Sbjct: 220 VEEGLKLIEARWGAGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMEAKGFLPTLVT--- 276

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
              Y  +I+ L K+G ++K   LFLEM+ RG++P V +  ++I   C   +  +   +  
Sbjct: 277 ---YGSLINCLGKKGDLEKIGSLFLEMRKRGLSPNVQIYNSVIDALCKCWSATQAMVILK 333

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
           +M   G  P+++TFN +I  LC  G + +A   L   I+R LNP++ +Y  L+ G+C+ G
Sbjct: 334 QMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRG 393

Query: 313 RIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYN 372
            +  A ++ + M  +G    VV++  LI+G      V EA+ +  ++    V   V  YN
Sbjct: 394 ELMAASDLLMEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYN 453

Query: 373 TLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMN 432
            L+SGL +      A+ + +EM   NV+PD   Y  LIDG  ++  + +A K+F  +E  
Sbjct: 454 VLISGLCKKHMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHK 513

Query: 433 KFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKA 492
                I   N +I G C+ G +  A      + + G +P   TY+ +I G  ++G L  A
Sbjct: 514 GVRPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGA 573

Query: 493 NDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVV 552
             +L  M K  C PNVVT+++L++G+ +   T     L   M      L P+  T++I++
Sbjct: 574 LRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDSAEGLFANMQ--AEALSPNVVTYTILI 631

Query: 553 DLLAKDEK 560
             L K +K
Sbjct: 632 GSLFKKDK 639



 Score =  198 bits (503), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 133/465 (28%), Positives = 222/465 (47%), Gaps = 19/465 (4%)

Query: 54  INLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTL 113
           + L EAR+  G + H      +  +N+L     +       +    ++ + G LP  +T 
Sbjct: 224 LKLIEARWGAGCIPH------VVFYNVLIDGYCRRGDMGRGLLLLGEMEAKGFLPTLVTY 277

Query: 114 NILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALR 173
             LINC G K         +++   LF  M   G+ P+V  Y ++I+  C+  + + A+ 
Sbjct: 278 GSLINCLGKK-------GDLEKIGSLFLEMRKRGLSPNVQIYNSVIDALCKCWSATQAMV 330

Query: 174 LHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTT 233
           + K+M +   +       +I +++ +I  LC EG V KA+    E   R +NP  +  T 
Sbjct: 331 ILKQMFASGCD------PDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTP 384

Query: 234 LIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRG 293
           LIHGFC  G     + L +EM+  G  P+++TF  +I  L   GK++EA  + E M +R 
Sbjct: 385 LIHGFCMRGELMAASDLLMEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQ 444

Query: 294 LNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAM 353
           + PD   YN L+ G C    +  A+ I   M  K  +     Y  LI+G+ +  N+ +A 
Sbjct: 445 VFPDVNIYNVLISGLCKKHMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDAR 504

Query: 354 SLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGL 413
            ++  +   GVR  +++ N ++ G  Q G    A      M+     PD  TY  +I G 
Sbjct: 505 KIFEFMEHKGVRPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGY 564

Query: 414 CKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTV 473
            K   +  A++    +   K +  +  ++ LI+G CK G  D+A  LF  +  + L P V
Sbjct: 565 AKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDSAEGLFANMQAEALSPNV 624

Query: 474 VTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGF 518
           VTY+I+I  L +K K+ +A  +   M  N C+PN VT + L++G 
Sbjct: 625 VTYTILIGSLFKKDKVLRAGLYFETMLLNHCSPNDVTLHYLVNGL 669



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 141/509 (27%), Positives = 223/509 (43%), Gaps = 62/509 (12%)

Query: 48  NCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLL 107
           NC     +L +    F  M     SP +  +N +  A+ K       +   +++ + G  
Sbjct: 282 NCLGKKGDLEKIGSLFLEMRKRGLSPNVQIYNSVIDALCKCWSATQAMVILKQMFASGCD 341

Query: 108 PDFLTLNILIN--CFGNKER--------------------------GLCVENRIKEATWL 139
           PD +T N LI   C     R                          G C+   +  A+ L
Sbjct: 342 PDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMAASDL 401

Query: 140 FKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSII 199
              M+  G  PDV+T+G LI+G    G +S AL + +KM     E  +    NI  Y+++
Sbjct: 402 LMEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMT----ERQVFPDVNI--YNVL 455

Query: 200 IDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGP 259
           I  LCK+ ++  AK +  EM  + + P   V  TLI GF  + N  +   +F  M   G 
Sbjct: 456 ISGLCKKHMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGV 515

Query: 260 RPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTARE 319
           RP++++ N MI   C+ G ++EA   +  M + G  PD FTY +++ GY   G ++ A  
Sbjct: 516 RPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALR 575

Query: 320 IFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLF 379
               M  + CK  VV+Y+ LINGYCK  + + A  L+  + +  +   V+TY  L+  LF
Sbjct: 576 WLCDMIKRKCKPNVVTYSSLINGYCKTGDTDSAEGLFANMQAEALSPNVVTYTILIGSLF 635

Query: 380 QAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIE 439
           +  +   A   F+ M L +  P+  T + L++GL   +C                     
Sbjct: 636 KKDKVLRAGLYFETMLLNHCSPNDVTLHYLVNGL--TSCTP------------------- 674

Query: 440 IFNCLIDGLC----KAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDF 495
              C+I+ +C    +    D    +F KL      P    Y+ +I  LCR   L +A DF
Sbjct: 675 ---CVINSICCNTSEVHGKDALLVVFKKLVFDIGDPRNSAYNAIIFSLCRHNMLREALDF 731

Query: 496 LLYMEKNGCAPNVVTFNTLMHGFLQNNKT 524
              M K G  PN +TF +L++GF    K+
Sbjct: 732 KNRMAKKGYVPNPITFLSLLYGFCSVGKS 760



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 95/349 (27%), Positives = 169/349 (48%), Gaps = 3/349 (0%)

Query: 210 DKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLD-LGPRPNLLTFNV 268
           D   +    M   G  P       L+  +  AG   +   +   + +  G  P +   N 
Sbjct: 115 DAVDDTLQSMSLAGAAPTRACLGALVAAYADAGMLGKATDMCERLREQYGSLPEVTHCNR 174

Query: 269 MIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKG 328
           ++  L +  + ++A  L + M+      D ++   L+ G CL GR++   ++  +    G
Sbjct: 175 LLKLLVEQRRWDDARKLYDEMLGEDSGADNYSTCVLVRGLCLEGRVEEGLKLIEARWGAG 234

Query: 329 CKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQ 388
           C   VV YN+LI+GYC+  ++   + L  ++ + G   T++TY +L++ L + G      
Sbjct: 235 CIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMEAKGFLPTLVTYGSLINCLGKKGDLEKIG 294

Query: 389 KLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGL 448
            LF EM+   + P++  YN +ID LCK     +A+ +   +  +  +  I  FN LI GL
Sbjct: 295 SLFLEMRKRGLSPNVQIYNSVIDALCKCWSATQAMVILKQMFASGCDPDIITFNTLITGL 354

Query: 449 CKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNV 508
           C  G +  A     +  ++ L P  ++Y+ +IHG C +G+L  A+D L+ M   G  P+V
Sbjct: 355 CHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMAASDLLMEMMGRGHTPDV 414

Query: 509 VTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAK 557
           VTF  L+HG +   K S+ + +  KM   ER + PD   +++++  L K
Sbjct: 415 VTFGALIHGLVVAGKVSEALIVREKMT--ERQVFPDVNIYNVLISGLCK 461



 Score = 92.8 bits (229), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 86/325 (26%), Positives = 139/325 (42%), Gaps = 37/325 (11%)

Query: 40  QLNEFLHENCKSGII---NLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVIS 96
           Q +EF++     G I   NL +AR  F +M H    P I S N +     +       I 
Sbjct: 481 QPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVRPDIVSCNAMIKGYCQFGMMSEAIL 540

Query: 97  FYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYG 156
               +  +G +PD  T   +I+       G   +  +  A     +MI    +P+V+TY 
Sbjct: 541 CMSNMRKVGCIPDEFTYTTVIS-------GYAKQGNLNGALRWLCDMIKRKCKPNVVTYS 593

Query: 157 TLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELF 216
           +LING+C+TG+   A  L   M +           N+ +Y+I+I SL K+  V +A   F
Sbjct: 594 SLINGYCKTGDTDSAEGLFANMQAEAL------SPNVVTYTILIGSLFKKDKVLRAGLYF 647

Query: 217 LEMKGRGINPAVVVCTTLIHGF-----------CCAGNWEEVNG------LFIEML-DLG 258
             M     +P  V    L++G            CC  N  EV+G      +F +++ D+G
Sbjct: 648 ETMLLNHCSPNDVTLHYLVNGLTSCTPCVINSICC--NTSEVHGKDALLVVFKKLVFDIG 705

Query: 259 PRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAR 318
             P    +N +I  LC+   + EA      M ++G  P+  T+ SL+ G+C VG+    R
Sbjct: 706 -DPRNSAYNAIIFSLCRHNMLREALDFKNRMAKKGYVPNPITFLSLLYGFCSVGKSMNWR 764

Query: 319 EIFLSMHSKGCKHTVVSYNILINGY 343
            I  +   +     +  Y  L + Y
Sbjct: 765 TILPNEFQQEEFEIIFRYKFLFDQY 789


>gi|115482788|ref|NP_001064987.1| Os10g0501700 [Oryza sativa Japonica Group]
 gi|22165069|gb|AAM93686.1| putative leaf protein [Oryza sativa Japonica Group]
 gi|31432904|gb|AAP54480.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
           Japonica Group]
 gi|113639596|dbj|BAF26901.1| Os10g0501700 [Oryza sativa Japonica Group]
 gi|125575306|gb|EAZ16590.1| hypothetical protein OsJ_32064 [Oryza sativa Japonica Group]
          Length = 454

 Score =  228 bits (581), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 129/378 (34%), Positives = 202/378 (53%), Gaps = 44/378 (11%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
           P   ++N +      +   +  I  +RK+ S G+ PD +T N L++        LC   +
Sbjct: 75  PNCFTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSLMDY-------LCKNGK 127

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
             EA  +F +M+  G++PD+ TYGTL++G+   G L     L   MV    +NG+    +
Sbjct: 128 CTEARKIFDSMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLALMV----QNGMQLDHH 183

Query: 193 IFS---------------------------------YSIIIDSLCKEGLVDKAKELFLEM 219
           +F+                                 Y  +ID LCK G +D A   F +M
Sbjct: 184 VFNILICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDAMLNFEQM 243

Query: 220 KGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKI 279
             +G+ P VVV T+LIH  C    WE+   L  E+LD G  PN++ FN ++D LCK G++
Sbjct: 244 IDKGLTPNVVVYTSLIHALCTYDKWEKAEELIFEILDQGINPNIVFFNTILDSLCKEGRV 303

Query: 280 NEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNIL 339
            E+  L +L+   G+NPD  TY++L+DGYCL G++D A ++   M S G K   V+Y+ L
Sbjct: 304 IESKKLFDLLGHIGVNPDVITYSTLIDGYCLAGKMDGAMKLLTGMVSVGLKPDSVTYSTL 363

Query: 340 INGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNV 399
           INGYCKI  +E+A++L++++ SNGV   +ITYN +L GLF+  +   A++L+  +     
Sbjct: 364 INGYCKINRMEDALALFKEMESNGVNPDIITYNIILHGLFRTRRTAAAKELYARITESGT 423

Query: 400 EPDLSTYNILIDGLCKNN 417
           + +LSTYNI++    K N
Sbjct: 424 QLELSTYNIILMDFAKTN 441



 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 128/450 (28%), Positives = 223/450 (49%), Gaps = 19/450 (4%)

Query: 108 PDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGN 167
           PD ++ N +I+       GL  E  + +A   +  M+   V PD +TY ++I    +   
Sbjct: 9   PDVVSYNTIID-------GLFKEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSKAQA 61

Query: 168 LSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPA 227
           +  A+ +   MV            N F+Y+ I+   C  G  +KA  +F +M   GI P 
Sbjct: 62  MDRAMEVLTVMV----------MPNCFTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPD 111

Query: 228 VVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLE 287
           VV   +L+   C  G   E   +F  M+  G +P++ T+  ++      G + E + LL 
Sbjct: 112 VVTYNSLMDYLCKNGKCTEARKIFDSMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLA 171

Query: 288 LMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKIL 347
           LM+Q G+  D   +N L+  Y    ++D    +F  M  +G     V+Y  +I+G CK+ 
Sbjct: 172 LMVQNGMQLDHHVFNILICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLG 231

Query: 348 NVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYN 407
            +++AM  + Q+I  G+   V+ Y +L+  L    +   A++L  E+    + P++  +N
Sbjct: 232 RLDDAMLNFEQMIDKGLTPNVVVYTSLIHALCTYDKWEKAEELIFEILDQGINPNIVFFN 291

Query: 408 ILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQK 467
            ++D LCK   V E+ KLF +L        +  ++ LIDG C AG++D A +L   +   
Sbjct: 292 TILDSLCKEGRVIESKKLFDLLGHIGVNPDVITYSTLIDGYCLAGKMDGAMKLLTGMVSV 351

Query: 468 GLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKV 527
           GL P  VTYS +I+G C+  ++E A      ME NG  P+++T+N ++HG  +  +T+  
Sbjct: 352 GLKPDSVTYSTLINGYCKINRMEDALALFKEMESNGVNPDIITYNIILHGLFRTRRTAAA 411

Query: 528 VELLHKMAEPERNLVPDDTTFSIVVDLLAK 557
            EL  ++ E    L  + +T++I++   AK
Sbjct: 412 KELYARITESGTQL--ELSTYNIILMDFAK 439



 Score =  208 bits (529), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 126/450 (28%), Positives = 225/450 (50%), Gaps = 17/450 (3%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
           P + S+N +   + K    D     Y +++   + PD +T N +I      +      +R
Sbjct: 9   PDVVSYNTIIDGLFKEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSKAQ----AMDR 64

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
             E       ++   V P+  TY ++++G+C +G    A+ + +KM S   E       +
Sbjct: 65  AME-------VLTVMVMPNCFTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIE------PD 111

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
           + +Y+ ++D LCK G   +A+++F  M  RG+ P +    TL+HG+   G   E++ L  
Sbjct: 112 VVTYNSLMDYLCKNGKCTEARKIFDSMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLA 171

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
            M+  G + +   FN++I    K  K++E   +   M Q+GL P+   Y +++DG C +G
Sbjct: 172 LMVQNGMQLDHHVFNILICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLG 231

Query: 313 RIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYN 372
           R+D A   F  M  KG    VV Y  LI+  C     E+A  L  +I+  G+   ++ +N
Sbjct: 232 RLDDAMLNFEQMIDKGLTPNVVVYTSLIHALCTYDKWEKAEELIFEILDQGINPNIVFFN 291

Query: 373 TLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMN 432
           T+L  L + G+   ++KLFD +    V PD+ TY+ LIDG C    +  A+KL   +   
Sbjct: 292 TILDSLCKEGRVIESKKLFDLLGHIGVNPDVITYSTLIDGYCLAGKMDGAMKLLTGMVSV 351

Query: 433 KFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKA 492
             +     ++ LI+G CK  R+++A  LF ++   G+ P ++TY+I++HGL R  +   A
Sbjct: 352 GLKPDSVTYSTLINGYCKINRMEDALALFKEMESNGVNPDIITYNIILHGLFRTRRTAAA 411

Query: 493 NDFLLYMEKNGCAPNVVTFNTLMHGFLQNN 522
            +    + ++G    + T+N ++  F + N
Sbjct: 412 KELYARITESGTQLELSTYNIILMDFAKTN 441



 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 124/423 (29%), Positives = 217/423 (51%), Gaps = 16/423 (3%)

Query: 150 PDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLV 209
           PDV++Y T+I+G  + G++  A   + +M+            +  +Y+ II +L K   +
Sbjct: 9   PDVVSYNTIIDGLFKEGDVDKAYITYHEMLDRRVS------PDAVTYNSIIAALSKAQAM 62

Query: 210 DKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVM 269
           D+A E+   M    + P      +++HG+C +G  E+  G+F +M   G  P+++T+N +
Sbjct: 63  DRAMEVLTVM----VMPNCFTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSL 118

Query: 270 IDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGC 329
           +D LCK GK  EA  + + M++RGL PD  TY +L+ GY   G +    ++   M   G 
Sbjct: 119 MDYLCKNGKCTEARKIFDSMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQNGM 178

Query: 330 KHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQK 389
           +     +NILI  Y K   V+E + ++ ++   G+    + Y T++ GL + G+   A  
Sbjct: 179 QLDHHVFNILICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDAML 238

Query: 390 LFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLC 449
            F++M    + P++  Y  LI  LC  +  ++A +L   +        I  FN ++D LC
Sbjct: 239 NFEQMIDKGLTPNVVVYTSLIHALCTYDKWEKAEELIFEILDQGINPNIVFFNTILDSLC 298

Query: 450 KAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVV 509
           K GR+  + +LF  L   G+ P V+TYS +I G C  GK++ A   L  M   G  P+ V
Sbjct: 299 KEGRVIESKKLFDLLGHIGVNPDVITYSTLIDGYCLAGKMDGAMKLLTGMVSVGLKPDSV 358

Query: 510 TFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSK 569
           T++TL++G+ + N+    + L  +M     N  PD  T++I++  L +  +    +A +K
Sbjct: 359 TYSTLINGYCKINRMEDALALFKEMESNGVN--PDIITYNIILHGLFRTRR----TAAAK 412

Query: 570 SSY 572
             Y
Sbjct: 413 ELY 415



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 117/435 (26%), Positives = 218/435 (50%), Gaps = 17/435 (3%)

Query: 55  NLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLN 114
           ++++A   +  M   + SP   ++N +  A++K +  D  +    +++++ ++P+  T N
Sbjct: 26  DVDKAYITYHEMLDRRVSPDAVTYNSIIAALSKAQAMDRAM----EVLTVMVMPNCFTYN 81

Query: 115 ILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRL 174
            +++       G C   + ++A  +F+ M + G+ PDV+TY +L++  C+ G  + A ++
Sbjct: 82  SIMH-------GYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSLMDYLCKNGKCTEARKI 134

Query: 175 HKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTL 234
              MV    + GL  K +I +Y  ++     +G + +  +L   M   G+     V   L
Sbjct: 135 FDSMV----KRGL--KPDITTYGTLLHGYASKGALVEMHDLLALMVQNGMQLDHHVFNIL 188

Query: 235 IHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGL 294
           I  +      +EV  +F +M   G  PN + +  +ID LCK G++++A    E MI +GL
Sbjct: 189 ICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDAMLNFEQMIDKGL 248

Query: 295 NPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMS 354
            P+   Y SL+   C   + + A E+   +  +G    +V +N +++  CK   V E+  
Sbjct: 249 TPNVVVYTSLIHALCTYDKWEKAEELIFEILDQGINPNIVFFNTILDSLCKEGRVIESKK 308

Query: 355 LYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLC 414
           L+  +   GV   VITY+TL+ G   AG+   A KL   M    ++PD  TY+ LI+G C
Sbjct: 309 LFDLLGHIGVNPDVITYSTLIDGYCLAGKMDGAMKLLTGMVSVGLKPDSVTYSTLINGYC 368

Query: 415 KNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVV 474
           K N +++A+ LF  +E N     I  +N ++ GL +  R   A EL+ ++ + G    + 
Sbjct: 369 KINRMEDALALFKEMESNGVNPDIITYNIILHGLFRTRRTAAAKELYARITESGTQLELS 428

Query: 475 TYSIMIHGLCRKGKL 489
           TY+I++    +   L
Sbjct: 429 TYNIILMDFAKTNSL 443



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 68/229 (29%), Positives = 120/229 (52%), Gaps = 6/229 (2%)

Query: 329 CKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQ 388
           C   VVSYN +I+G  K  +V++A   Y +++   V    +TYN++++ L +A     A 
Sbjct: 7   CPPDVVSYNTIIDGLFKEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSKAQAMDRAM 66

Query: 389 KLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGL 448
           ++   M    V P+  TYN ++ G C +   ++A+ +F  +  +  E  +  +N L+D L
Sbjct: 67  EVLTVM----VMPNCFTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSLMDYL 122

Query: 449 CKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNV 508
           CK G+   A ++F  + ++GL P + TY  ++HG   KG L + +D L  M +NG   + 
Sbjct: 123 CKNGKCTEARKIFDSMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQNGMQLDH 182

Query: 509 VTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAK 557
             FN L+  + +  K  +VV +  KM   ++ L P+   +  V+D L K
Sbjct: 183 HVFNILICAYTKQEKVDEVVLVFSKMR--QQGLTPNAVNYRTVIDGLCK 229


>gi|302784458|ref|XP_002974001.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
 gi|300158333|gb|EFJ24956.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
          Length = 561

 Score =  228 bits (581), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 149/539 (27%), Positives = 265/539 (49%), Gaps = 30/539 (5%)

Query: 42  NEF-----LHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVIS 96
           NEF     +H  CK+G   L++A      M      P ++  N +   + K   +   + 
Sbjct: 29  NEFTYGSLIHGLCKAG--KLDQAYELLDEMRDRGIPPGVAVHNGVIKGLCKAGRFGDALG 86

Query: 97  FYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNM-IAFGVRPDVITY 155
           +++ +      PD +T NIL++        L    R++EA  +F++M  +    P+V+TY
Sbjct: 87  YFKTVAGTKCTPDIITFNILVD-------ALVKSGRVEEAFQIFESMHTSSQCLPNVVTY 139

Query: 156 GTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKEL 215
            T+ING C+ G L  A+ L   M     E G     N+ +YS++++ LCK G  DK   L
Sbjct: 140 TTVINGLCKDGKLDRAIELLDLM----NETGCCP--NVITYSVLVEGLCKAGRTDKGFTL 193

Query: 216 FLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCK 275
             EM  RG  P V++  TL++G C +   +E   L   M+  G  P ++T+N +++  C+
Sbjct: 194 LQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCR 253

Query: 276 GGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVS 335
             +++ A  L+++M +RG  PD   YN+++ G C   R+D A+ +   M +  C   V++
Sbjct: 254 SKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVIT 313

Query: 336 YNILINGYCKILNV------EEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQK 389
           Y+ +I+G CK   V      E A  +   +   G      TY  ++ GL +A ++  A  
Sbjct: 314 YSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALA 373

Query: 390 LFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLC 449
           L   M    V PDLS+++++I  LCK++ +  A K+F M+   + +     +  LIDGL 
Sbjct: 374 LLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLS 433

Query: 450 KAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVV 509
           K G +D A  +F +L  +   P V TY+ ++ GLC  G++E+A   +  M    C P+  
Sbjct: 434 KGGEVDKAVRVF-ELMVESFRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGA 492

Query: 510 TFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVS 568
           ++  L+ G  + +   +  EL    A   +    +   ++++V+ L K ++  +   V+
Sbjct: 493 SYGALIRGLCRVSCVEEAYELFQ--AVEAKGFAMEVGVYNVLVNELCKKKRLSDAHGVA 549



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 128/385 (33%), Positives = 208/385 (54%), Gaps = 12/385 (3%)

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
           N F+Y  +I  LCK G +D+A EL  EM+ RGI P V V   +I G C AG + +  G F
Sbjct: 29  NEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIKGLCKAGRFGDALGYF 88

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELM-IQRGLNPDRFTYNSLMDGYCL 310
             +      P+++TFN+++D L K G++ EA  + E M       P+  TY ++++G C 
Sbjct: 89  KTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCK 148

Query: 311 VGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVIT 370
            G++D A E+   M+  GC   V++Y++L+ G CK    ++  +L +++   G +  VI 
Sbjct: 149 DGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIM 208

Query: 371 YNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLE 430
           YNTLL+GL ++ +   A +L   M      P + TYN L++  C++  V  A +L  ++ 
Sbjct: 209 YNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMS 268

Query: 431 MNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCR----- 485
                  +  +N +I GLC+  RLD+A  L  ++     VP V+TYS +I GLC+     
Sbjct: 269 ERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVD 328

Query: 486 -KGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPD 544
              KLE A + L  M++ GC PN  T+  ++ G  +  K+ + + LL +M + E  +VPD
Sbjct: 329 ADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSE--VVPD 386

Query: 545 DTTFSIVVDLLAKDEKYHECSAVSK 569
            ++FS+V+  L K    H+  A  K
Sbjct: 387 LSSFSMVIGSLCKS---HDLDAAYK 408



 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 134/446 (30%), Positives = 219/446 (49%), Gaps = 47/446 (10%)

Query: 150 PDVITYGTLINGFCRTGNLSVALRL---------------HKKMVSGDYENGLISKT--- 191
           P+  TYG+LI+G C+ G L  A  L               H  ++ G  + G        
Sbjct: 28  PNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIKGLCKAGRFGDALGY 87

Query: 192 -----------NIFSYSIIIDSLCKEGLVDKAKELFLEM-KGRGINPAVVVCTTLIHGFC 239
                      +I +++I++D+L K G V++A ++F  M       P VV  TT+I+G C
Sbjct: 88  FKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLC 147

Query: 240 CAGNWEEVNGLFIEMLDL----GPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLN 295
             G  +      IE+LDL    G  PN++T++V+++ LCK G+ ++   LL+ M +RG  
Sbjct: 148 KDGKLDRA----IELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQ 203

Query: 296 PDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSL 355
           PD   YN+L++G C   R+D A E+   M   GC  TVV+YN L+  +C+   V+ A  L
Sbjct: 204 PDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRL 263

Query: 356 YRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCK 415
            + +   G    VI YNT+++GL +  +   AQ L  +M      PD+ TY+ +IDGLCK
Sbjct: 264 IQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCK 323

Query: 416 NNCV------QEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGL 469
           +  V      + A ++  M++          +  +I+GLC+A +   A  L  ++    +
Sbjct: 324 DWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEV 383

Query: 470 VPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVE 529
           VP + ++S++I  LC+   L+ A      M +  C PN V +  L+ G  +  +  K V 
Sbjct: 384 VPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVR 443

Query: 530 LLHKMAEPERNLVPDDTTFSIVVDLL 555
           +   M E  R   P   T++ V+D L
Sbjct: 444 VFELMVESFR---PGVATYNSVLDGL 466



 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 128/426 (30%), Positives = 212/426 (49%), Gaps = 22/426 (5%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CK G   L+ A      M      P + ++++L   + K    D   +  +++   G  P
Sbjct: 147 CKDG--KLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQP 204

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           D +  N L+N       GLC   R+ EA  L + MI  G  P V+TY +L+  FCR+  +
Sbjct: 205 DVIMYNTLLN-------GLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQV 257

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
             A RL + M     E G     ++ +Y+ +I  LC++  +D A+ L  +M      P V
Sbjct: 258 DRAFRLIQVM----SERG--CPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDV 311

Query: 229 VVCTTLIHGFC----CAGNWE-EVNGLFIEML-DLGPRPNLLTFNVMIDCLCKGGKINEA 282
           +  +T+I G C       +W+ E     +EM+   G  PN  T+ V+I+ LC+  K  +A
Sbjct: 312 ITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQA 371

Query: 283 NGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILING 342
             LL  MI   + PD  +++ ++   C    +D A +IF  M  + CK   V+Y  LI+G
Sbjct: 372 LALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDG 431

Query: 343 YCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPD 402
             K   V++A+ ++ +++    R  V TYN++L GL   G+   A ++ + M      PD
Sbjct: 432 LSKGGEVDKAVRVF-ELMVESFRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPD 490

Query: 403 LSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFH 462
            ++Y  LI GLC+ +CV+EA +LF  +E   F   + ++N L++ LCK  RL +A  + +
Sbjct: 491 GASYGALIRGLCRVSCVEEAYELFQAVEAKGFAMEVGVYNVLVNELCKKKRLSDAHGVAN 550

Query: 463 KLPQKG 468
           KL + G
Sbjct: 551 KLIEAG 556



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 96/299 (32%), Positives = 163/299 (54%), Gaps = 3/299 (1%)

Query: 261 PNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREI 320
           PN  T+  +I  LCK GK+++A  LL+ M  RG+ P    +N ++ G C  GR   A   
Sbjct: 28  PNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIKGLCKAGRFGDALGY 87

Query: 321 FLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQI-ISNGVRQTVITYNTLLSGLF 379
           F ++    C   ++++NIL++   K   VEEA  ++  +  S+     V+TY T+++GL 
Sbjct: 88  FKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLC 147

Query: 380 QAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIE 439
           + G+   A +L D M      P++ TY++L++GLCK     +   L   +    F+  + 
Sbjct: 148 KDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVI 207

Query: 440 IFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYM 499
           ++N L++GLCK+ RLD A EL   + + G  PTVVTY+ ++   CR  ++++A   +  M
Sbjct: 208 MYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVM 267

Query: 500 EKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKD 558
            + GC P+V+ +NT++ G  ++ +      LL +M       VPD  T+S ++D L KD
Sbjct: 268 SERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAA--RCVPDVITYSTIIDGLCKD 324



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 89/332 (26%), Positives = 160/332 (48%), Gaps = 24/332 (7%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
           N  +   C+S    ++ A      M+     P + ++N +   + ++   D   +  +++
Sbjct: 245 NSLMELFCRSK--QVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQM 302

Query: 102 VSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATW-------LFKNMIAFGVRPDVIT 154
           V+   +PD +T + +I+       GLC + R+ +A W       + + M   G  P+  T
Sbjct: 303 VAARCVPDVITYSTIID-------GLCKDWRV-DADWKLEAACEILEMMKQTGCPPNAGT 354

Query: 155 YGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKE 214
           Y  +I G CR      AL L ++M+  +         ++ S+S++I SLCK   +D A +
Sbjct: 355 YAVVIEGLCRARKSQQALALLRRMIDSEV------VPDLSSFSMVIGSLCKSHDLDAAYK 408

Query: 215 LFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLC 274
           +F  M  R   P  V    LI G    G  ++   +F E++    RP + T+N ++D LC
Sbjct: 409 IFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVF-ELMVESFRPGVATYNSVLDGLC 467

Query: 275 KGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVV 334
             G+I EA  ++E MI +   PD  +Y +L+ G C V  ++ A E+F ++ +KG    V 
Sbjct: 468 GVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYELFQAVEAKGFAMEVG 527

Query: 335 SYNILINGYCKILNVEEAMSLYRQIISNGVRQ 366
            YN+L+N  CK   + +A  +  ++I  G +Q
Sbjct: 528 VYNVLVNELCKKKRLSDAHGVANKLIEAGYKQ 559



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 76/276 (27%), Positives = 138/276 (50%), Gaps = 38/276 (13%)

Query: 335 SYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEM 394
           +Y  LI+G CK   +++A  L  ++   G+   V  +N ++ GL +AG+ G A   F  +
Sbjct: 32  TYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIKGLCKAGRFGDALGYFKTV 91

Query: 395 KLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMN---------------------K 433
                 PD+ T+NIL+D L K+  V+EA ++F  +  +                     K
Sbjct: 92  AGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGK 151

Query: 434 FEFGIEI---------------FNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSI 478
            +  IE+               ++ L++GLCKAGR D  + L  ++ ++G  P V+ Y+ 
Sbjct: 152 LDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNT 211

Query: 479 MIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPE 538
           +++GLC+  +L++A + +  M ++GC P VVT+N+LM  F ++ +  +   L+  M+  E
Sbjct: 212 LLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMS--E 269

Query: 539 RNLVPDDTTFSIVVDLLAKDEKYHECSAVSKSSYRA 574
           R   PD   ++ V+  L +D +  +  A+ K    A
Sbjct: 270 RGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAA 305



 Score =  112 bits (280), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 73/248 (29%), Positives = 120/248 (48%), Gaps = 35/248 (14%)

Query: 372 NTLLSGLFQAGQAGYAQKLF--------------------------------DEMKLYNV 399
           N  L+ L +AGQ G A +LF                                DEM+   +
Sbjct: 2   NCALNLLVRAGQHGQAVQLFREERCVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGI 61

Query: 400 EPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWE 459
            P ++ +N +I GLCK     +A+  F  +   K    I  FN L+D L K+GR++ A++
Sbjct: 62  PPGVAVHNGVIKGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQ 121

Query: 460 LFHKL-PQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGF 518
           +F  +      +P VVTY+ +I+GLC+ GKL++A + L  M + GC PNV+T++ L+ G 
Sbjct: 122 IFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGL 181

Query: 519 LQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKSSYRACLYV 578
            +  +T K   LL +M    R   PD   ++ +++ L K  +  E   + +   R+  Y 
Sbjct: 182 CKAGRTDKGFTLLQEMT--RRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYP 239

Query: 579 TIFQPSSL 586
           T+   +SL
Sbjct: 240 TVVTYNSL 247


>gi|125528410|gb|EAY76524.1| hypothetical protein OsI_04465 [Oryza sativa Indica Group]
          Length = 703

 Score =  228 bits (581), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 151/553 (27%), Positives = 269/553 (48%), Gaps = 54/553 (9%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
           N  L   C  G  +L+ A   F  +   Q +P   +++ L   +AK    D  +    ++
Sbjct: 162 NIVLRSLCARG--DLDRAVTLFDSLRRRQVAPDCITYSTLMCGLAKQDRLDHALDLLDEM 219

Query: 102 VSIGLLPDFLTLNILIN-CFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLIN 160
              G+ PD +  N L+  CF   E     E  ++    L K+    G RP++ TY  +++
Sbjct: 220 PRSGVQPDVVCYNALLGGCFKAGE----FEKVMRVWDKLVKDP---GARPNLATYNVMLD 272

Query: 161 GFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMK 220
           G C+ G       + ++MV+ + +       ++ +Y I+I  LC+ G VD A  ++ E+ 
Sbjct: 273 GLCKFGRFKEVGEVWERMVANNLQ------PDVITYGILIHGLCRSGDVDGAARVYSEII 326

Query: 221 GRGINPAVVVCTTLIHGFCCAGNWEE----------------------VNGLF------- 251
             G+     +  +L+ GFC AG  +E                      + GLF       
Sbjct: 327 KTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLRNLRTYNIMIKGLFDSGMVDE 386

Query: 252 -IEMLDLGPR-----PNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLM 305
            IE+ DL  +     P+ +TF  +I  LC+ G  N+A  + E     G   D F+Y+S++
Sbjct: 387 AIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMI 446

Query: 306 DGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVR 365
           +G C VGR+  A +++  M   GCK     YN LI+G+C++    +A+ +Y ++  NG  
Sbjct: 447 NGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCS 506

Query: 366 QTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKL 425
            TVITYNTL+ GL +A +   A  +  EM      PD++TY  LI GL  +  + +A+ +
Sbjct: 507 PTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSI 566

Query: 426 FHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQ-KGLVPTVVTYSIMIHGLC 484
           +  +     +  + + N LI GLC AG++D A  +F  + + K   P +VTY+ ++ GL 
Sbjct: 567 WKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLY 626

Query: 485 RKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPD 544
             G ++KA      + ++G  P+++++NT + G    ++  + ++LL ++    R ++P 
Sbjct: 627 ETGYIDKAATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLDEVL--SRGIIPT 684

Query: 545 DTTFSIVVDLLAK 557
             T++I+V  + K
Sbjct: 685 VITWNILVRAVIK 697



 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 149/505 (29%), Positives = 246/505 (48%), Gaps = 31/505 (6%)

Query: 76  SSFNLLFGAVAKNRHYDAVISFYRKLVSI-GLLPDFLTLNILINCFGNKERGLCVENRIK 134
           S+  ++  A ++    DA +  +R L SI G  P   + N L++ F    R         
Sbjct: 84  SAALVVLSAFSRAIMPDAALDAFRALPSILGCNPGIRSHNALLDAFVRARR-------FS 136

Query: 135 EATWLFKNMI--AFGVR--PDVITYGTLINGFCRTGNLSVAL----RLHKKMVSGDYENG 186
           +A   F ++   AFG R  P++ TY  ++   C  G+L  A+     L ++ V+ D    
Sbjct: 137 DADAFFASLSHGAFGRRIAPNLQTYNIVLRSLCARGDLDRAVTLFDSLRRRQVAPD---- 192

Query: 187 LISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEE 246
                   +YS ++  L K+  +D A +L  EM   G+ P VV    L+ G   AG +E+
Sbjct: 193 ------CITYSTLMCGLAKQDRLDHALDLLDEMPRSGVQPDVVCYNALLGGCFKAGEFEK 246

Query: 247 VNGLFIEML-DLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLM 305
           V  ++ +++ D G RPNL T+NVM+D LCK G+  E   + E M+   L PD  TY  L+
Sbjct: 247 VMRVWDKLVKDPGARPNLATYNVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILI 306

Query: 306 DGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVR 365
            G C  G +D A  ++  +   G       YN L+ G+C+   V+EA   +      G+R
Sbjct: 307 HGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLR 366

Query: 366 QTVITYNTLLSGLFQAGQAGYAQKLFDEM-KLYNVEPDLSTYNILIDGLCKNNCVQEAVK 424
             + TYN ++ GLF +G    A +L+D + K     PD  T+  LI GLC+N    +A  
Sbjct: 367 N-LRTYNIMIKGLFDSGMVDEAIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFT 425

Query: 425 LFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLC 484
           +F    ++  +  +  ++ +I+GLC  GRL +A +++ K+ + G  P    Y+ +I G C
Sbjct: 426 IFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFC 485

Query: 485 RKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPD 544
           +  +   A      M  NGC+P V+T+NTL+ G  +  K  +   +  +M E      PD
Sbjct: 486 QVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVE--NGFTPD 543

Query: 545 DTTFSIVVDLLAKDEKYHECSAVSK 569
            TT+  ++  L  D+K  +  ++ K
Sbjct: 544 ITTYGSLIRGLFSDKKIDDALSIWK 568



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 150/548 (27%), Positives = 259/548 (47%), Gaps = 54/548 (9%)

Query: 56  LNEARYFFGYMTH----MQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFL 111
            ++A  FF  ++H     + +P + ++N++  ++      D  ++ +  L    + PD +
Sbjct: 135 FSDADAFFASLSHGAFGRRIAPNLQTYNIVLRSLCARGDLDRAVTLFDSLRRRQVAPDCI 194

Query: 112 TLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVA 171
           T + L+ C      GL  ++R+  A  L   M   GV+PDV+ Y  L+ G  + G     
Sbjct: 195 TYSTLM-C------GLAKQDRLDHALDLLDEMPRSGVQPDVVCYNALLGGCFKAGEFEKV 247

Query: 172 LRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVC 231
           +R+  K+V    + G  ++ N+ +Y++++D LCK G   +  E++  M    + P V+  
Sbjct: 248 MRVWDKLVK---DPG--ARPNLATYNVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITY 302

Query: 232 TTLIHGFCCAGNWEEVNGLFIEMLDLG--------------------------------- 258
             LIHG C +G+ +    ++ E++  G                                 
Sbjct: 303 GILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGF 362

Query: 259 -PRPNLLTFNVMIDCLCKGGKINEANGLLELMIQR-GLNPDRFTYNSLMDGYCLVGRIDT 316
               NL T+N+MI  L   G ++EA  L +L+ +     PD  T+ +L+ G C  G  + 
Sbjct: 363 AGLRNLRTYNIMIKGLFDSGMVDEAIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFANK 422

Query: 317 AREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLS 376
           A  IF      G +  V SY+ +ING C +  + +A+ +Y ++  +G +     YN L+S
Sbjct: 423 AFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALIS 482

Query: 377 GLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEF 436
           G  Q  +   A +++ +M      P + TYN LIDGLCK    QEA  +   +  N F  
Sbjct: 483 GFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTP 542

Query: 437 GIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKA-NDF 495
            I  +  LI GL    ++D+A  ++ ++  KGL   V+ ++I+IHGLC  GK+++A + F
Sbjct: 543 DITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVF 602

Query: 496 LLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLL 555
               EK  C PN+VT+NTLM G  +     K   L   +   E  L PD  +++  +  L
Sbjct: 603 SDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAATLWTSIT--EDGLEPDIISYNTRIKGL 660

Query: 556 AKDEKYHE 563
              ++ HE
Sbjct: 661 CSCDRIHE 668



 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 144/501 (28%), Positives = 238/501 (47%), Gaps = 73/501 (14%)

Query: 56  LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLV-SIGLLPDFLTLN 114
           L+ A      M      P +  +N L G   K   ++ V+  + KLV   G  P+  T N
Sbjct: 209 LDHALDLLDEMPRSGVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYN 268

Query: 115 ILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRL 174
           ++++       GLC   R KE   +++ M+A  ++PDVITYG LI+G CR+G++  A R+
Sbjct: 269 VMLD-------GLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARV 321

Query: 175 HKK---------------MVSGDYENGLISKT-------------NIFSYSIIIDSLCKE 206
           + +               +V G  + G + +              N+ +Y+I+I  L   
Sbjct: 322 YSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLRNLRTYNIMIKGLFDS 381

Query: 207 GLVDKAKELF-LEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLT 265
           G+VD+A EL+ L  K     P  V   TLIHG C  G   +   +F E    G + ++ +
Sbjct: 382 GMVDEAIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFS 441

Query: 266 FNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMH 325
           ++ MI+ LC  G++ +A  + E M + G  P+   YN+L+ G+C V R   A  I+  M 
Sbjct: 442 YSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMA 501

Query: 326 SKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQ----- 380
             GC  TV++YN LI+G CK    +EA S+ R+++ NG    + TY +L+ GLF      
Sbjct: 502 DNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKID 561

Query: 381 ------------------------------AGQAGYAQKLFDEMK-LYNVEPDLSTYNIL 409
                                         AG+   A  +F +MK   N  P+L TYN L
Sbjct: 562 DALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTL 621

Query: 410 IDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGL 469
           +DGL +   + +A  L+  +  +  E  I  +N  I GLC   R+    +L  ++  +G+
Sbjct: 622 MDGLYETGYIDKAATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLDEVLSRGI 681

Query: 470 VPTVVTYSIMIHGLCRKGKLE 490
           +PTV+T++I++  + + G ++
Sbjct: 682 IPTVITWNILVRAVIKYGPIQ 702



 Score = 55.8 bits (133), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 34/130 (26%), Positives = 61/130 (46%), Gaps = 10/130 (7%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPP-ISSFNLLFGAVAKNRHYDAVISFYRK 100
           N  +H  C +G   ++EA + F  M   +  PP + ++N L   + +  + D   + +  
Sbjct: 583 NILIHGLCSAG--KVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAATLWTS 640

Query: 101 LVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLIN 160
           +   GL PD ++ N  I       +GLC  +RI E   L   +++ G+ P VIT+  L+ 
Sbjct: 641 ITEDGLEPDIISYNTRI-------KGLCSCDRIHEGIQLLDEVLSRGIIPTVITWNILVR 693

Query: 161 GFCRTGNLSV 170
              + G + V
Sbjct: 694 AVIKYGPIQV 703


>gi|302803484|ref|XP_002983495.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
 gi|300148738|gb|EFJ15396.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
          Length = 561

 Score =  228 bits (581), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 149/539 (27%), Positives = 265/539 (49%), Gaps = 30/539 (5%)

Query: 42  NEF-----LHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVIS 96
           NEF     +H  CK+G   L++A      M      P ++  N +   + K   +   + 
Sbjct: 29  NEFTYGSLIHGLCKAG--KLDQAYELLDEMRDRGIPPGVAVHNGVIRGLCKAGRFGDALG 86

Query: 97  FYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNM-IAFGVRPDVITY 155
           +++ +      PD +T NIL++        L    R++EA  +F++M  +    P+V+TY
Sbjct: 87  YFKTVAGTKCTPDIITFNILVD-------ALVKSGRVEEAFQIFESMHTSSQCLPNVVTY 139

Query: 156 GTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKEL 215
            T+ING C+ G L  A+ L   M     E G     N+ +YS++++ LCK G  DK   L
Sbjct: 140 TTVINGLCKDGKLDRAIELLDLM----NETGCCP--NVITYSVLVEGLCKAGRTDKGFTL 193

Query: 216 FLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCK 275
             EM  RG  P V++  TL++G C +   +E   L   M+  G  P ++T+N +++  C+
Sbjct: 194 LQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCR 253

Query: 276 GGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVS 335
             +++ A  L+++M +RG  PD   YN+++ G C   R+D A+ +   M +  C   V++
Sbjct: 254 SKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVIT 313

Query: 336 YNILINGYCKILNV------EEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQK 389
           Y+ +I+G CK   V      E A  +   +   G      TY  ++ GL +A ++  A  
Sbjct: 314 YSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALA 373

Query: 390 LFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLC 449
           L   M    V PDLS+++++I  LCK++ +  A K+F M+   + +     +  LIDGL 
Sbjct: 374 LLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLS 433

Query: 450 KAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVV 509
           K G +D A  +F +L  +   P V TY+ ++ GLC  G++E+A   +  M    C P+  
Sbjct: 434 KGGEVDKAVRVF-ELMVESFRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGA 492

Query: 510 TFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVS 568
           ++  L+ G  + +   +  EL    A   +    +   ++++V+ L K ++  +   V+
Sbjct: 493 SYGALIRGLCRVSCVEEAYELFQ--AVEAKGFAMEVGVYNVLVNELCKKKRLSDAHGVA 549



 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 128/385 (33%), Positives = 208/385 (54%), Gaps = 12/385 (3%)

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
           N F+Y  +I  LCK G +D+A EL  EM+ RGI P V V   +I G C AG + +  G F
Sbjct: 29  NEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIRGLCKAGRFGDALGYF 88

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELM-IQRGLNPDRFTYNSLMDGYCL 310
             +      P+++TFN+++D L K G++ EA  + E M       P+  TY ++++G C 
Sbjct: 89  KTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCK 148

Query: 311 VGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVIT 370
            G++D A E+   M+  GC   V++Y++L+ G CK    ++  +L +++   G +  VI 
Sbjct: 149 DGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIM 208

Query: 371 YNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLE 430
           YNTLL+GL ++ +   A +L   M      P + TYN L++  C++  V  A +L  ++ 
Sbjct: 209 YNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMS 268

Query: 431 MNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCR----- 485
                  +  +N +I GLC+  RLD+A  L  ++     VP V+TYS +I GLC+     
Sbjct: 269 ERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVD 328

Query: 486 -KGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPD 544
              KLE A + L  M++ GC PN  T+  ++ G  +  K+ + + LL +M + E  +VPD
Sbjct: 329 ADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSE--VVPD 386

Query: 545 DTTFSIVVDLLAKDEKYHECSAVSK 569
            ++FS+V+  L K    H+  A  K
Sbjct: 387 LSSFSMVIGSLCKS---HDLDAAYK 408



 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 134/446 (30%), Positives = 219/446 (49%), Gaps = 47/446 (10%)

Query: 150 PDVITYGTLINGFCRTGNLSVALRL---------------HKKMVSGDYENGLISKT--- 191
           P+  TYG+LI+G C+ G L  A  L               H  ++ G  + G        
Sbjct: 28  PNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIRGLCKAGRFGDALGY 87

Query: 192 -----------NIFSYSIIIDSLCKEGLVDKAKELFLEM-KGRGINPAVVVCTTLIHGFC 239
                      +I +++I++D+L K G V++A ++F  M       P VV  TT+I+G C
Sbjct: 88  FKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLC 147

Query: 240 CAGNWEEVNGLFIEMLDL----GPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLN 295
             G  +      IE+LDL    G  PN++T++V+++ LCK G+ ++   LL+ M +RG  
Sbjct: 148 KDGKLDRA----IELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQ 203

Query: 296 PDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSL 355
           PD   YN+L++G C   R+D A E+   M   GC  TVV+YN L+  +C+   V+ A  L
Sbjct: 204 PDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRL 263

Query: 356 YRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCK 415
            + +   G    VI YNT+++GL +  +   AQ L  +M      PD+ TY+ +IDGLCK
Sbjct: 264 IQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCK 323

Query: 416 NNCV------QEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGL 469
           +  V      + A ++  M++          +  +I+GLC+A +   A  L  ++    +
Sbjct: 324 DWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEV 383

Query: 470 VPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVE 529
           VP + ++S++I  LC+   L+ A      M +  C PN V +  L+ G  +  +  K V 
Sbjct: 384 VPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVR 443

Query: 530 LLHKMAEPERNLVPDDTTFSIVVDLL 555
           +   M E  R   P   T++ V+D L
Sbjct: 444 VFELMVESFR---PGVATYNSVLDGL 466



 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 128/426 (30%), Positives = 212/426 (49%), Gaps = 22/426 (5%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CK G   L+ A      M      P + ++++L   + K    D   +  +++   G  P
Sbjct: 147 CKDG--KLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQP 204

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           D +  N L+N       GLC   R+ EA  L + MI  G  P V+TY +L+  FCR+  +
Sbjct: 205 DVIMYNTLLN-------GLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQV 257

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
             A RL + M     E G     ++ +Y+ +I  LC++  +D A+ L  +M      P V
Sbjct: 258 DRAFRLIQVM----SERG--CPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDV 311

Query: 229 VVCTTLIHGFC----CAGNWE-EVNGLFIEML-DLGPRPNLLTFNVMIDCLCKGGKINEA 282
           +  +T+I G C       +W+ E     +EM+   G  PN  T+ V+I+ LC+  K  +A
Sbjct: 312 ITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQA 371

Query: 283 NGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILING 342
             LL  MI   + PD  +++ ++   C    +D A +IF  M  + CK   V+Y  LI+G
Sbjct: 372 LALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDG 431

Query: 343 YCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPD 402
             K   V++A+ ++ +++    R  V TYN++L GL   G+   A ++ + M      PD
Sbjct: 432 LSKGGEVDKAVRVF-ELMVESFRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPD 490

Query: 403 LSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFH 462
            ++Y  LI GLC+ +CV+EA +LF  +E   F   + ++N L++ LCK  RL +A  + +
Sbjct: 491 GASYGALIRGLCRVSCVEEAYELFQAVEAKGFAMEVGVYNVLVNELCKKKRLSDAHGVAN 550

Query: 463 KLPQKG 468
           KL + G
Sbjct: 551 KLIEAG 556



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 96/299 (32%), Positives = 163/299 (54%), Gaps = 3/299 (1%)

Query: 261 PNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREI 320
           PN  T+  +I  LCK GK+++A  LL+ M  RG+ P    +N ++ G C  GR   A   
Sbjct: 28  PNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIRGLCKAGRFGDALGY 87

Query: 321 FLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQI-ISNGVRQTVITYNTLLSGLF 379
           F ++    C   ++++NIL++   K   VEEA  ++  +  S+     V+TY T+++GL 
Sbjct: 88  FKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLC 147

Query: 380 QAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIE 439
           + G+   A +L D M      P++ TY++L++GLCK     +   L   +    F+  + 
Sbjct: 148 KDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVI 207

Query: 440 IFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYM 499
           ++N L++GLCK+ RLD A EL   + + G  PTVVTY+ ++   CR  ++++A   +  M
Sbjct: 208 MYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVM 267

Query: 500 EKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKD 558
            + GC P+V+ +NT++ G  ++ +      LL +M       VPD  T+S ++D L KD
Sbjct: 268 SERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAA--RCVPDVITYSTIIDGLCKD 324



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 89/332 (26%), Positives = 160/332 (48%), Gaps = 24/332 (7%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
           N  +   C+S    ++ A      M+     P + ++N +   + ++   D   +  +++
Sbjct: 245 NSLMELFCRSK--QVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQM 302

Query: 102 VSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATW-------LFKNMIAFGVRPDVIT 154
           V+   +PD +T + +I+       GLC + R+ +A W       + + M   G  P+  T
Sbjct: 303 VAARCVPDVITYSTIID-------GLCKDWRV-DADWKLEAACEILEMMKQTGCPPNAGT 354

Query: 155 YGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKE 214
           Y  +I G CR      AL L ++M+  +         ++ S+S++I SLCK   +D A +
Sbjct: 355 YAVVIEGLCRARKSQQALALLRRMIDSEV------VPDLSSFSMVIGSLCKSHDLDAAYK 408

Query: 215 LFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLC 274
           +F  M  R   P  V    LI G    G  ++   +F E++    RP + T+N ++D LC
Sbjct: 409 IFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVF-ELMVESFRPGVATYNSVLDGLC 467

Query: 275 KGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVV 334
             G+I EA  ++E MI +   PD  +Y +L+ G C V  ++ A E+F ++ +KG    V 
Sbjct: 468 GVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYELFQAVEAKGFAMEVG 527

Query: 335 SYNILINGYCKILNVEEAMSLYRQIISNGVRQ 366
            YN+L+N  CK   + +A  +  ++I  G +Q
Sbjct: 528 VYNVLVNELCKKKRLSDAHGVANKLIEAGYKQ 559



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 76/276 (27%), Positives = 138/276 (50%), Gaps = 38/276 (13%)

Query: 335 SYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEM 394
           +Y  LI+G CK   +++A  L  ++   G+   V  +N ++ GL +AG+ G A   F  +
Sbjct: 32  TYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIRGLCKAGRFGDALGYFKTV 91

Query: 395 KLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMN---------------------K 433
                 PD+ T+NIL+D L K+  V+EA ++F  +  +                     K
Sbjct: 92  AGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGK 151

Query: 434 FEFGIEI---------------FNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSI 478
            +  IE+               ++ L++GLCKAGR D  + L  ++ ++G  P V+ Y+ 
Sbjct: 152 LDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNT 211

Query: 479 MIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPE 538
           +++GLC+  +L++A + +  M ++GC P VVT+N+LM  F ++ +  +   L+  M+  E
Sbjct: 212 LLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMS--E 269

Query: 539 RNLVPDDTTFSIVVDLLAKDEKYHECSAVSKSSYRA 574
           R   PD   ++ V+  L +D +  +  A+ K    A
Sbjct: 270 RGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAA 305



 Score =  112 bits (279), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 73/248 (29%), Positives = 120/248 (48%), Gaps = 35/248 (14%)

Query: 372 NTLLSGLFQAGQAGYAQKLF--------------------------------DEMKLYNV 399
           N  L+ L +AGQ G A +LF                                DEM+   +
Sbjct: 2   NCALNLLVRAGQHGQAVQLFREERCVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGI 61

Query: 400 EPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWE 459
            P ++ +N +I GLCK     +A+  F  +   K    I  FN L+D L K+GR++ A++
Sbjct: 62  PPGVAVHNGVIRGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQ 121

Query: 460 LFHKL-PQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGF 518
           +F  +      +P VVTY+ +I+GLC+ GKL++A + L  M + GC PNV+T++ L+ G 
Sbjct: 122 IFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGL 181

Query: 519 LQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKSSYRACLYV 578
            +  +T K   LL +M    R   PD   ++ +++ L K  +  E   + +   R+  Y 
Sbjct: 182 CKAGRTDKGFTLLQEMT--RRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYP 239

Query: 579 TIFQPSSL 586
           T+   +SL
Sbjct: 240 TVVTYNSL 247


>gi|297833172|ref|XP_002884468.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297330308|gb|EFH60727.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 598

 Score =  228 bits (581), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 140/492 (28%), Positives = 237/492 (48%), Gaps = 43/492 (8%)

Query: 38  ETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISF 97
           +TQ+ +  H +C+SG  N  E+ +    M     +P +     L       R+    +  
Sbjct: 85  DTQMLKIFHRSCRSG--NYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNVPKAVRV 142

Query: 98  YRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGT 157
              L   G  PD    N LIN       G C  NRI +AT +   M +    PD +TY  
Sbjct: 143 MEILEKFGQ-PDVFAYNALIN-------GFCKMNRIDDATRVLDRMRSKDFSPDTVTYNI 194

Query: 158 LINGFCRTGNLSVALRLHKKMVSGDYENGLIS---------------------------- 189
           +I   C  G L +AL++  +++S + +  +I+                            
Sbjct: 195 MIGSLCSRGKLDLALKVLDQLLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRG 254

Query: 190 -KTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVN 248
            K ++F+Y+ II  +CKEG+VD+A E+   ++ +G  P V+    L+      G WEE  
Sbjct: 255 LKPDMFTYNTIIRGMCKEGMVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGE 314

Query: 249 GLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGY 308
            L  +M      PN++T++++I  LC+ GKI EA  LL+LM ++GL PD ++Y+ L+  +
Sbjct: 315 KLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAF 374

Query: 309 CLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTV 368
           C  GR+D A E   +M S GC   +V+YN ++   CK    ++A+ ++ ++   G     
Sbjct: 375 CREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNS 434

Query: 369 ITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHM 428
            +YNT+ S L+ +G    A  +  EM    ++PD  TYN +I  LC+   V +A +L   
Sbjct: 435 SSYNTMFSALWSSGDKIRALHMILEMVSNGIDPDEITYNSMISCLCREGMVDKAFELLVD 494

Query: 429 LEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGL----C 484
           +   +F   +  +N ++ G CKA R+++A ++   +   G  P   TY+++I G+     
Sbjct: 495 MRSCEFHPSVVTYNIVLLGFCKAHRIEDAIDVLDSMVGNGCRPNETTYTVLIEGIGFAGY 554

Query: 485 RKGKLEKANDFL 496
           R   +E AND +
Sbjct: 555 RAEAMELANDLV 566



 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 101/333 (30%), Positives = 183/333 (54%), Gaps = 1/333 (0%)

Query: 204 CKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNL 263
           C+ G   ++  L   M  +G NP V++CT LI GF    N  +   + +E+L+   +P++
Sbjct: 96  CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNVPKAVRV-MEILEKFGQPDV 154

Query: 264 LTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLS 323
             +N +I+  CK  +I++A  +L+ M  +  +PD  TYN ++   C  G++D A ++   
Sbjct: 155 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLDQ 214

Query: 324 MHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQ 383
           + S  C+ TV++Y ILI        V+EA+ L  +++S G++  + TYNT++ G+ + G 
Sbjct: 215 LLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGM 274

Query: 384 AGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNC 443
              A ++   ++L   EPD+ +YNIL+  L      +E  KL   +   K +  +  ++ 
Sbjct: 275 VDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSI 334

Query: 444 LIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNG 503
           LI  LC+ G+++ A  L   + +KGL P   +Y  +I   CR+G+L+ A +FL  M  +G
Sbjct: 335 LITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDG 394

Query: 504 CAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAE 536
           C P++V +NT++    +N K  + +E+  K+ E
Sbjct: 395 CLPDIVNYNTVLATLCKNGKADQALEIFGKLGE 427



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 120/425 (28%), Positives = 203/425 (47%), Gaps = 9/425 (2%)

Query: 128 CVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGL 187
           C      E+  L + M+  G  PDVI    LI GF    N+  A+R+ + +         
Sbjct: 96  CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNVPKAVRVMEILEK------- 148

Query: 188 ISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEV 247
             + ++F+Y+ +I+  CK   +D A  +   M+ +  +P  V    +I   C  G  +  
Sbjct: 149 FGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLA 208

Query: 248 NGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDG 307
             +  ++L    +P ++T+ ++I+     G ++EA  LL+ M+ RGL PD FTYN+++ G
Sbjct: 209 LKVLDQLLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRG 268

Query: 308 YCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQT 367
            C  G +D A E+  ++  KGC+  V+SYNIL+         EE   L  ++ S      
Sbjct: 269 MCKEGMVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPN 328

Query: 368 VITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFH 427
           V+TY+ L++ L + G+   A  L   MK   + PD  +Y+ LI   C+   +  A++   
Sbjct: 329 VVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLE 388

Query: 428 MLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKG 487
            +  +     I  +N ++  LCK G+ D A E+F KL + G  P   +Y+ M   L   G
Sbjct: 389 TMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSG 448

Query: 488 KLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTT 547
              +A   +L M  NG  P+ +T+N+++    +     K  ELL  M   E    P   T
Sbjct: 449 DKIRALHMILEMVSNGIDPDEITYNSMISCLCREGMVDKAFELLVDMRSCE--FHPSVVT 506

Query: 548 FSIVV 552
           ++IV+
Sbjct: 507 YNIVL 511



 Score =  172 bits (435), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 107/396 (27%), Positives = 192/396 (48%), Gaps = 9/396 (2%)

Query: 163 CRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGR 222
           CR+GN   +L L + MV   Y   +I  T +      + ++ K   V +  E F +    
Sbjct: 96  CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNVPKAVRVMEILEKFGQ---- 151

Query: 223 GINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEA 282
              P V     LI+GFC     ++   +   M      P+ +T+N+MI  LC  GK++ A
Sbjct: 152 ---PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLA 208

Query: 283 NGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILING 342
             +L+ ++     P   TY  L++   L G +D A ++   M S+G K  + +YN +I G
Sbjct: 209 LKVLDQLLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRG 268

Query: 343 YCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPD 402
            CK   V+ A  + R +   G    VI+YN LL  L   G+    +KL  +M     +P+
Sbjct: 269 MCKEGMVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPN 328

Query: 403 LSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFH 462
           + TY+ILI  LC++  ++EA+ L  +++          ++ LI   C+ GRLD A E   
Sbjct: 329 VVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLE 388

Query: 463 KLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNN 522
            +   G +P +V Y+ ++  LC+ GK ++A +    + + GC+PN  ++NT+      + 
Sbjct: 389 TMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSG 448

Query: 523 KTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKD 558
              + + ++ +M      + PD+ T++ ++  L ++
Sbjct: 449 DKIRALHMILEMV--SNGIDPDEITYNSMISCLCRE 482


>gi|356544498|ref|XP_003540687.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Glycine max]
          Length = 623

 Score =  228 bits (581), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 129/394 (32%), Positives = 217/394 (55%), Gaps = 6/394 (1%)

Query: 125 RGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYE 184
           R  C   +  EA   F  +   G  P++ T   +++ F +     +A  L+ +M   +  
Sbjct: 154 RAYCELKKPNEALECFYLIKEKGFVPNIETCNQMLSLFLKLNRTQMAWVLYAEMFRMNI- 212

Query: 185 NGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNW 244
                ++++++++I+I+ LCKEG + KAKE    M+  G+ P VV   T+IHG C  G +
Sbjct: 213 -----RSSLYTFNIMINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHCLRGKF 267

Query: 245 EEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSL 304
           +    +F  M D G  P+  T+N  I  LCK G++ EA+GL+  M++ GL P+  TYN+L
Sbjct: 268 QRARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTYNAL 327

Query: 305 MDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGV 364
           +DGYC  G +D A      M SKG   ++V+YN+ I+       + +A ++ +++   G+
Sbjct: 328 IDGYCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEMREKGM 387

Query: 365 RQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVK 424
               +T+N L++G  + G A  A  L DEM    ++P L TY  LI  L K N ++EA  
Sbjct: 388 MPDAVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRMKEADA 447

Query: 425 LFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLC 484
           LF  ++       I +FN LIDG C  G +D A++L  ++    ++P  +TY+ ++ G C
Sbjct: 448 LFSKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVLPDEITYNTLMQGYC 507

Query: 485 RKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGF 518
           R+GK+E+A   L  M++ G  P+ +++NTL+ G+
Sbjct: 508 REGKVEEARQLLDEMKRRGIKPDHISYNTLISGY 541



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 133/478 (27%), Positives = 238/478 (49%), Gaps = 15/478 (3%)

Query: 78  FNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEAT 137
           F+LL  A  + +  +  +  +  +   G +P+  T N +++ F          NR + A 
Sbjct: 149 FDLLVRAYCELKKPNEALECFYLIKEKGFVPNIETCNQMLSLF-------LKLNRTQMAW 201

Query: 138 WLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYS 197
            L+  M    +R  + T+  +IN  C+ G L  A     K   G  E  L  K N+ +Y+
Sbjct: 202 VLYAEMFRMNIRSSLYTFNIMINVLCKEGKLKKA-----KEFIGHMET-LGVKPNVVTYN 255

Query: 198 IIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDL 257
            II   C  G   +A+ +F  MK +G+ P      + I G C  G  EE +GL  +ML+ 
Sbjct: 256 TIIHGHCLRGKFQRARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEG 315

Query: 258 GPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTA 317
           G  PN +T+N +ID  C  G +++A    + MI +G+     TYN  +    + GR+  A
Sbjct: 316 GLVPNAVTYNALIDGYCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDA 375

Query: 318 REIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSG 377
             +   M  KG     V++NILINGYC+  + + A  L  +++  G++ T++TY +L+  
Sbjct: 376 DNMIKEMREKGMMPDAVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYV 435

Query: 378 LFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFG 437
           L +  +   A  LF +++   + PD+  +N LIDG C N  +  A +L   ++  K    
Sbjct: 436 LGKRNRMKEADALFSKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVLPD 495

Query: 438 IEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLL 497
              +N L+ G C+ G+++ A +L  ++ ++G+ P  ++Y+ +I G  ++G ++ A     
Sbjct: 496 EITYNTLMQGYCREGKVEEARQLLDEMKRRGIKPDHISYNTLISGYSKRGDMKDAFRVRD 555

Query: 498 YMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLL 555
            M   G  P ++T+N L+ G  +N +     ELL +M    + + PDD+T+  +++ +
Sbjct: 556 EMMTTGFDPTILTYNALIQGLCKNQEGEHAEELLKEMV--SKGITPDDSTYLSIIEAM 611



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 128/436 (29%), Positives = 215/436 (49%), Gaps = 13/436 (2%)

Query: 59  ARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILIN 118
           A   +  M  M     + +FN++   + K         F   + ++G+ P+ +T N +I+
Sbjct: 200 AWVLYAEMFRMNIRSSLYTFNIMINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIH 259

Query: 119 CFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKM 178
                  G C+  + + A  +F+ M   G+ PD  TY + I+G C+ G L  A  L  KM
Sbjct: 260 -------GHCLRGKFQRARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKM 312

Query: 179 VSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGF 238
           + G    GL+   N  +Y+ +ID  C +G +DKA     EM  +GI  ++V     IH  
Sbjct: 313 LEG----GLVP--NAVTYNALIDGYCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHAL 366

Query: 239 CCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDR 298
              G   + + +  EM + G  P+ +T N++I+  C+ G    A GLL+ M+ +G+ P  
Sbjct: 367 FMEGRMGDADNMIKEMREKGMMPDAVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPTL 426

Query: 299 FTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQ 358
            TY SL+       R+  A  +F  +  +G    ++ +N LI+G+C   N++ A  L ++
Sbjct: 427 VTYTSLIYVLGKRNRMKEADALFSKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKE 486

Query: 359 IISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNC 418
           + +  V    ITYNTL+ G  + G+   A++L DEMK   ++PD  +YN LI G  K   
Sbjct: 487 MDNMKVLPDEITYNTLMQGYCREGKVEEARQLLDEMKRRGIKPDHISYNTLISGYSKRGD 546

Query: 419 VQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSI 478
           +++A ++   +    F+  I  +N LI GLCK    ++A EL  ++  KG+ P   TY  
Sbjct: 547 MKDAFRVRDEMMTTGFDPTILTYNALIQGLCKNQEGEHAEELLKEMVSKGITPDDSTYLS 606

Query: 479 MIHGLCRKGKLEKAND 494
           +I  +     LE  +D
Sbjct: 607 IIEAMETVDDLEGNDD 622



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 120/433 (27%), Positives = 209/433 (48%), Gaps = 43/433 (9%)

Query: 189 SKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVN 248
           +KT +  + +++ + C+    ++A E F  +K +G  P +  C  ++  F      +   
Sbjct: 143 AKTTLI-FDLLVRAYCELKKPNEALECFYLIKEKGFVPNIETCNQMLSLFLKLNRTQMAW 201

Query: 249 GLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGY 308
            L+ EM  +  R +L TFN+MI+ LCK GK+ +A   +  M   G+ P+  TYN+++ G+
Sbjct: 202 VLYAEMFRMNIRSSLYTFNIMINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGH 261

Query: 309 CLVGRIDTAREIFLSMHSKG---------------CKH--------------------TV 333
           CL G+   AR IF +M  KG               CK                       
Sbjct: 262 CLRGKFQRARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNA 321

Query: 334 VSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDE 393
           V+YN LI+GYC   ++++A +   ++IS G+  +++TYN  +  LF  G+ G A  +  E
Sbjct: 322 VTYNALIDGYCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKE 381

Query: 394 MKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGR 453
           M+   + PD  T+NILI+G C+    + A  L   +     +  +  +  LI  L K  R
Sbjct: 382 MREKGMMPDAVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNR 441

Query: 454 LDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNT 513
           +  A  LF K+ Q+GL+P ++ ++ +I G C  G +++A   L  M+     P+ +T+NT
Sbjct: 442 MKEADALFSKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVLPDEITYNT 501

Query: 514 LMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKSSYR 573
           LM G+ +  K  +  +LL +M    R + PD  +++ ++   +K     +   V     R
Sbjct: 502 LMQGYCREGKVEEARQLLDEMK--RRGIKPDHISYNTLISGYSKRGDMKDAFRV-----R 554

Query: 574 ACLYVTIFQPSSL 586
             +  T F P+ L
Sbjct: 555 DEMMTTGFDPTIL 567



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 52/190 (27%), Positives = 90/190 (47%), Gaps = 13/190 (6%)

Query: 56  LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNI 115
           + EA   F  +      P I  FN L      N + D      +++ ++ +LPD +T N 
Sbjct: 442 MKEADALFSKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVLPDEITYNT 501

Query: 116 LINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLH 175
           L+       +G C E +++EA  L   M   G++PD I+Y TLI+G+ + G++  A R+ 
Sbjct: 502 LM-------QGYCREGKVEEARQLLDEMKRRGIKPDHISYNTLISGYSKRGDMKDAFRVR 554

Query: 176 KKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLI 235
            +M++  ++        I +Y+ +I  LCK    + A+EL  EM  +GI P      ++I
Sbjct: 555 DEMMTTGFD------PTILTYNALIQGLCKNQEGEHAEELLKEMVSKGITPDDSTYLSII 608

Query: 236 HGFCCAGNWE 245
                  + E
Sbjct: 609 EAMETVDDLE 618



 Score = 47.4 bits (111), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 34/132 (25%), Positives = 51/132 (38%), Gaps = 9/132 (6%)

Query: 38  ETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISF 97
           E   N  +   C+ G   + EAR     M      P   S+N L    +K          
Sbjct: 496 EITYNTLMQGYCREG--KVEEARQLLDEMKRRGIKPDHISYNTLISGYSKRGDMKDAFRV 553

Query: 98  YRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGT 157
             ++++ G  P  LT N LI       +GLC     + A  L K M++ G+ PD  TY +
Sbjct: 554 RDEMMTTGFDPTILTYNALI-------QGLCKNQEGEHAEELLKEMVSKGITPDDSTYLS 606

Query: 158 LINGFCRTGNLS 169
           +I       +L 
Sbjct: 607 IIEAMETVDDLE 618


>gi|449532420|ref|XP_004173179.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g05670, mitochondrial-like [Cucumis sativus]
          Length = 748

 Score =  228 bits (581), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 163/565 (28%), Positives = 260/565 (46%), Gaps = 39/565 (6%)

Query: 30  QIAAVSSPETQLNEFLHE---NCKSGI-INLNEARYFFGYMTHMQPSPPISSFNLLFGAV 85
            IA VS+     +E +H+   N K  I + + +  +   Y        PI+ F++ F  +
Sbjct: 142 HIAVVSNDLRLAHELVHDYFLNSKLEIGVKMTQFTHRLIYTYKYWGPNPIA-FDIFFQVL 200

Query: 86  AKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERG------------------- 126
            +  H         KL+S GL+    + N  ++   N   G                   
Sbjct: 201 VEIGHLSEARKLLDKLLSYGLVVTVDSCNAFLSRIANNSEGIEMAIKVFCEYGISWNTTS 260

Query: 127 -------LCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMV 179
                  LC   ++KEA  L   M      PDV++Y T+I+G+C  G L  AL+L   M 
Sbjct: 261 YNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKALKLMDDMQ 320

Query: 180 SGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFC 239
                 GL  K N ++Y+ II  LCK G   +A+++  EM  + I P  VV TTLIHGF 
Sbjct: 321 I----KGL--KPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFF 374

Query: 240 CAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRF 299
             G+    N  F EML     P+ +T+  +I    +GGK+ E   L   MI RGL PD  
Sbjct: 375 KLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEV 434

Query: 300 TYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQI 359
           TY +L+D YC  G +  A  +   M   G    +V+Y  LI+G CK   ++ A  L  ++
Sbjct: 435 TYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEM 494

Query: 360 ISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCV 419
              G++  V  YN++++G+ +AG    A KL  EM++  ++PD  TY  +ID  C+   +
Sbjct: 495 RKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDI 554

Query: 420 QEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIM 479
            +A KL   +     +  +  FN L++G C  G L++   L   + +KG+VP  +TY+ +
Sbjct: 555 DKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTL 614

Query: 480 IHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPER 539
           +   C +  +         M   G AP+  T+N L+ G  +     +   L  +M   E+
Sbjct: 615 MKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMI--EK 672

Query: 540 NLVPDDTTFSIVVDLLAKDEKYHEC 564
             VP  T+++ ++    K  K+ E 
Sbjct: 673 GYVPTVTSYNALIKRFYKKRKFXEA 697



 Score =  209 bits (531), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 133/480 (27%), Positives = 229/480 (47%), Gaps = 15/480 (3%)

Query: 33  AVSSPETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYD 92
            +S   T  N  ++  C+ G   + EA      M     +P + S++ +           
Sbjct: 253 GISWNTTSYNIIIYSLCRLG--KVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELK 310

Query: 93  AVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDV 152
             +     +   GL P+  T N +I         LC   +  EA  + + M++  + PD 
Sbjct: 311 KALKLMDDMQIKGLKPNRYTYNSIILL-------LCKIGKSFEAEKVLREMMSQKIIPDN 363

Query: 153 ITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKA 212
           + Y TLI+GF + G++  A +   +M+S       I+      Y+ +I    + G V + 
Sbjct: 364 VVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYIT------YTTLIQGFGQGGKVIEP 417

Query: 213 KELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDC 272
           + LF EM  RG+ P  V  TTLI  +C AG       L  EM+ +G  PN++T+  +ID 
Sbjct: 418 QNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDG 477

Query: 273 LCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHT 332
           LCK G+++ AN LL+ M ++GL  +   YNS+++G C  G I+ A ++   M   G    
Sbjct: 478 LCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPD 537

Query: 333 VVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFD 392
            ++Y  +I+ YC++ ++++A  L ++++  G++ TV+T+N L++G    G      +L  
Sbjct: 538 AITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLG 597

Query: 393 EMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAG 452
            M    + PD  TYN L+   C  N +    K++  +           +N LI G CKA 
Sbjct: 598 WMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKAR 657

Query: 453 RLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFN 512
            L  AW L+ ++ +KG VPTV +Y+ +I    +K K  +A +    M  +G   +   +N
Sbjct: 658 NLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKRKFXEARELFEEMRGHGLVADGEIYN 717



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 118/389 (30%), Positives = 193/389 (49%), Gaps = 48/389 (12%)

Query: 58  EARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILI 117
           EA      M   +  P    +  L     K  H      ++ +++S  + PD++T   LI
Sbjct: 346 EAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLI 405

Query: 118 NCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKK 177
             FG          ++ E   LF  MI+ G++PD +TY TLI+ +C+ G +  A  LH +
Sbjct: 406 QGFGQG-------GKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNE 458

Query: 178 MVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHG 237
           MV    + G+    NI +Y  +ID LCK G +D A EL  EM+ +G+   V +  ++++G
Sbjct: 459 MV----QMGMTP--NIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNG 512

Query: 238 FCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPD 297
            C AGN E+   L  EM   G  P+ +T+  +ID  C+ G I++A+ LL+ M+ RGL P 
Sbjct: 513 ICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPT 572

Query: 298 RFTYNSLMDGYCLVGRID-----------------------------------TAREIFL 322
             T+N LM+G+C++G ++                                   T  +I+ 
Sbjct: 573 VVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYK 632

Query: 323 SMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAG 382
            M ++G      +YNILI G+CK  N++EA  LY+++I  G   TV +YN L+   ++  
Sbjct: 633 RMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKR 692

Query: 383 QAGYAQKLFDEMKLYNVEPDLSTYNILID 411
           +   A++LF+EM+ + +  D   YN  +D
Sbjct: 693 KFXEARELFEEMRGHGLVADGEIYNFFVD 721



 Score =  191 bits (486), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 134/446 (30%), Positives = 215/446 (48%), Gaps = 22/446 (4%)

Query: 51  SGIINLNEARYFFGYMTHMQPS---PPISSFN---LLFGAVAKNRHYDAVISFYRKLVSI 104
            G  +L E +     M  MQ     P   ++N   LL   + K+   + V+   R+++S 
Sbjct: 301 DGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVL---REMMSQ 357

Query: 105 GLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCR 164
            ++PD +    LI+       G      ++ A   F  M++  + PD ITY TLI GF +
Sbjct: 358 KIIPDNVVYTTLIH-------GFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQ 410

Query: 165 TGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGI 224
            G +     L  +M+S     GL  K +  +Y+ +ID  CK G +  A  L  EM   G+
Sbjct: 411 GGKVIEPQNLFHEMIS----RGL--KPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGM 464

Query: 225 NPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANG 284
            P +V    LI G C  G  +  N L  EM   G + N+  +N M++ +CK G I +A  
Sbjct: 465 TPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIK 524

Query: 285 LLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYC 344
           L++ M   G++PD  TY +++D YC +G ID A ++   M  +G + TVV++N+L+NG+C
Sbjct: 525 LMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFC 584

Query: 345 KILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLS 404
            +  +E+   L   ++  G+    ITYNTL+             K++  M+   V PD +
Sbjct: 585 MLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSN 644

Query: 405 TYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKL 464
           TYNILI G CK   ++EA  L+  +    +   +  +N LI    K  +   A ELF ++
Sbjct: 645 TYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKRKFXEARELFEEM 704

Query: 465 PQKGLVPTVVTYSIMIHGLCRKGKLE 490
              GLV     Y+  +     +G +E
Sbjct: 705 RGHGLVADGEIYNFFVDMCYEEGDVE 730



 Score = 72.4 bits (176), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 61/250 (24%), Positives = 109/250 (43%), Gaps = 15/250 (6%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CK+G  N+ +A      M      P   ++  +  A  +    D      ++++  GL P
Sbjct: 514 CKAG--NIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQP 571

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
             +T N+L+N       G C+   +++   L   M+  G+ PD ITY TL+   C   ++
Sbjct: 572 TVVTFNVLMN-------GFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSM 624

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
           +   +++K+M +     G+   +N  +Y+I+I   CK   + +A  L+ EM  +G  P V
Sbjct: 625 NTTTKIYKRMRN----QGVAPDSN--TYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTV 678

Query: 229 VVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLEL 288
                LI  F     + E   LF EM   G   +   +N  +D   + G +     L + 
Sbjct: 679 TSYNALIKRFYKKRKFXEARELFEEMRGHGLVADGEIYNFFVDMCYEEGDVEITLNLCDE 738

Query: 289 MIQRGLNPDR 298
            I++ L  +R
Sbjct: 739 AIEKCLLNER 748


>gi|302758166|ref|XP_002962506.1| hypothetical protein SELMODRAFT_450632 [Selaginella moellendorffii]
 gi|300169367|gb|EFJ35969.1| hypothetical protein SELMODRAFT_450632 [Selaginella moellendorffii]
          Length = 807

 Score =  228 bits (581), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 151/480 (31%), Positives = 239/480 (49%), Gaps = 23/480 (4%)

Query: 53  IINLNEARYFFGYM-THMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFL 111
           + N   A  FFG+  T       + ++N  + A+ +    +     +++     L+PD +
Sbjct: 67  VKNGESAMVFFGWAGTRQDFRHTVHTYNCFYEALIRTGQCEEAYRLFKEKWPQELIPDSI 126

Query: 112 TLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVA 171
           T  ILI       RGLC   ++K A  L++ M+  G+RP V+T   L+N  C++GNL +A
Sbjct: 127 TYGILI-------RGLCNFGKLKLACSLYEEMVDRGLRPVVLTCKFLLNALCKSGNLELA 179

Query: 172 LRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVC 231
           LR  +KM          S     +++I+ID L +   VD+A   F EMK   I P     
Sbjct: 180 LRYFEKMS---------SIPCAATWTILIDGLFRAIRVDEACYYFEEMKHTAI-PNNWTY 229

Query: 232 TTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQ 291
           T +I+G   AG   E   +  EM    P P L  +  +I   CK G + +A  LLE M +
Sbjct: 230 TVVINGLVKAGKVAEAERVLQEM----PVPTLANYTSVIGGHCKAGDMGKAYHLLEDMKR 285

Query: 292 RGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEE 351
           +G   D  TYN+L+ G+C +  ID A E+   M S      + +Y+ILI G C+   + E
Sbjct: 286 KGYQGDNLTYNTLIHGHCRLQEIDRAYELLEEMKSNDFVPDIFTYDILIAGLCRAKRLSE 345

Query: 352 AMSLYRQIIS-NGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILI 410
           A  L   + + +     V++YNTL+ G  +A +   A +LF EM      PD+ TY+ LI
Sbjct: 346 ARDLLGTLRNEDDCTPNVVSYNTLIDGFSKAARVNDAYQLFLEMVTAGQHPDVVTYSTLI 405

Query: 411 DGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLV 470
            GLC      EA      +   K    + +++ +I GLC+AG LD A  +F  +   G  
Sbjct: 406 RGLCNAGRASEAHSYLEEMVGKKILPKVPVYSSVISGLCRAGELDAASTVFDSMVANGCQ 465

Query: 471 PTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVEL 530
           P +  Y+ +I+GLC+ G+L  A   +  M + GC+P+ VT+ TL+ G  + ++T +  +L
Sbjct: 466 PNLAVYNSLIYGLCKTGRLCDAKLRVKEMTERGCSPDGVTYGTLIVGLCRWSRTDEACDL 525



 Score =  188 bits (478), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 140/561 (24%), Positives = 258/561 (45%), Gaps = 62/561 (11%)

Query: 48  NCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLL 107
           +CK+G  ++ +A +    M          ++N L     + +  D       ++ S   +
Sbjct: 267 HCKAG--DMGKAYHLLEDMKRKGYQGDNLTYNTLIHGHCRLQEIDRAYELLEEMKSNDFV 324

Query: 108 PDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMI-AFGVRPDVITYGTLINGFCRTG 166
           PD  T +ILI        GLC   R+ EA  L   +       P+V++Y TLI+GF +  
Sbjct: 325 PDIFTYDILIA-------GLCRAKRLSEARDLLGTLRNEDDCTPNVVSYNTLIDGFSKAA 377

Query: 167 NLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINP 226
            ++ A +L  +MV+           ++ +YS +I  LC  G   +A     EM G+ I P
Sbjct: 378 RVNDAYQLFLEMVTAG------QHPDVVTYSTLIRGLCNAGRASEAHSYLEEMVGKKILP 431

Query: 227 AVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLL 286
            V V +++I G C AG  +  + +F  M+  G +PNL  +N +I  LCK G++ +A   +
Sbjct: 432 KVPVYSSVISGLCRAGELDAASTVFDSMVANGCQPNLAVYNSLIYGLCKTGRLCDAKLRV 491

Query: 287 ELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKI 346
           + M +RG +PD  TY +L+ G C   R D A ++++    +G + +  S N++I     +
Sbjct: 492 KEMTERGCSPDGVTYGTLIVGLCRWSRTDEACDLYVRSLEQGIEISETSCNVVI---ASL 548

Query: 347 LNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTY 406
             +E+A  + R +++ G   T   Y T++  L +      A++L ++M    ++PD ST 
Sbjct: 549 RCLEQAQRVLRVVLATGNSPTAFFYATVIESLCKENNLAEARQLLEDMIGAGIKPDGSTV 608

Query: 407 NILIDGLCKNNCVQEAVKLFHMLEMNKF--EFGIEIFNCLIDGLCKAGR----------- 453
           + L+  +C+ +  +  V +  + EM +   +  +  ++ L++ L KAG+           
Sbjct: 609 DALVGAMCRQD--KAVVAMAFLEEMVRLGSKPSVGTYSTLLNALFKAGKPSEAHVVLRRL 666

Query: 454 -------------------------LDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGK 488
                                    ++ A  +  +L  K  + ++V Y+ ++ GL R   
Sbjct: 667 ISHTSCFPDELWYVGLIAAYSNQDQVEEARNVLQELKSKWGIQSIVAYNTLLKGLFRTRN 726

Query: 489 LEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTF 548
           L+   + L  M++N    N  TFN L+ GF +  +T + V +L +M   ++ L P     
Sbjct: 727 LQMVYELLREMKRNEFVVNEATFNILIQGFCRLGQTDRAVRVLSEM---KKVLTPSAAII 783

Query: 549 SIVVDLLAKDEKYHECSAVSK 569
             +VD LA+ E+  E   + K
Sbjct: 784 KFLVDELARAEREQESKDLVK 804



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 139/549 (25%), Positives = 252/549 (45%), Gaps = 41/549 (7%)

Query: 44  FLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVS 103
            L+  CKSG  NL  A  +F  M+ +   P  +++ +L   + +    D    ++ ++  
Sbjct: 166 LLNALCKSG--NLELALRYFEKMSSI---PCAATWTILIDGLFRAIRVDEACYYFEEMKH 220

Query: 104 IGLLPDFLTLNILINCF------GNKER------------------GLCVENRIKEATWL 139
             + P+  T  ++IN           ER                  G C    + +A  L
Sbjct: 221 TAI-PNNWTYTVVINGLVKAGKVAEAERVLQEMPVPTLANYTSVIGGHCKAGDMGKAYHL 279

Query: 140 FKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSII 199
            ++M   G + D +TY TLI+G CR   +  A  L ++M S D+        +IF+Y I+
Sbjct: 280 LEDMKRKGYQGDNLTYNTLIHGHCRLQEIDRAYELLEEMKSNDF------VPDIFTYDIL 333

Query: 200 IDSLCKEGLVDKAKELFLEMKGRG-INPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLG 258
           I  LC+   + +A++L   ++      P VV   TLI GF  A    +   LF+EM+  G
Sbjct: 334 IAGLCRAKRLSEARDLLGTLRNEDDCTPNVVSYNTLIDGFSKAARVNDAYQLFLEMVTAG 393

Query: 259 PRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAR 318
             P+++T++ +I  LC  G+ +EA+  LE M+ + + P    Y+S++ G C  G +D A 
Sbjct: 394 QHPDVVTYSTLIRGLCNAGRASEAHSYLEEMVGKKILPKVPVYSSVISGLCRAGELDAAS 453

Query: 319 EIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGL 378
            +F SM + GC+  +  YN LI G CK   + +A    +++   G     +TY TL+ GL
Sbjct: 454 TVFDSMVANGCQPNLAVYNSLIYGLCKTGRLCDAKLRVKEMTERGCSPDGVTYGTLIVGL 513

Query: 379 FQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGI 438
            +  +   A  L+       +E   ++ N++I  L    C+++A ++  ++         
Sbjct: 514 CRWSRTDEACDLYVRSLEQGIEISETSCNVVIASL---RCLEQAQRVLRVVLATGNSPTA 570

Query: 439 EIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLY 498
             +  +I+ LCK   L  A +L   +   G+ P   T   ++  +CR+ K   A  FL  
Sbjct: 571 FFYATVIESLCKENNLAEARQLLEDMIGAGIKPDGSTVDALVGAMCRQDKAVVAMAFLEE 630

Query: 499 MEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKD 558
           M + G  P+V T++TL++   +  K S+   +L ++     +  PD+  +  ++   +  
Sbjct: 631 MVRLGSKPSVGTYSTLLNALFKAGKPSEAHVVLRRLIS-HTSCFPDELWYVGLIAAYSNQ 689

Query: 559 EKYHECSAV 567
           ++  E   V
Sbjct: 690 DQVEEARNV 698



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 112/427 (26%), Positives = 193/427 (45%), Gaps = 67/427 (15%)

Query: 190 KTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNG 249
           +  + +Y+   ++L + G  ++A  LF E   + + P  +    LI G C  G  +    
Sbjct: 87  RHTVHTYNCFYEALIRTGQCEEAYRLFKEKWPQELIPDSITYGILIRGLCNFGKLKLACS 146

Query: 250 LFIEMLDLGPRPNLLTFNVMIDCLCKGG-------------------------------- 277
           L+ EM+D G RP +LT   +++ LCK G                                
Sbjct: 147 LYEEMVDRGLRPVVLTCKFLLNALCKSGNLELALRYFEKMSSIPCAATWTILIDGLFRAI 206

Query: 278 KINEA----------------------NGLL--------ELMIQRGLNPDRFTYNSLMDG 307
           +++EA                      NGL+        E ++Q    P    Y S++ G
Sbjct: 207 RVDEACYYFEEMKHTAIPNNWTYTVVINGLVKAGKVAEAERVLQEMPVPTLANYTSVIGG 266

Query: 308 YCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQT 367
           +C  G +  A  +   M  KG +   ++YN LI+G+C++  ++ A  L  ++ SN     
Sbjct: 267 HCKAGDMGKAYHLLEDMKRKGYQGDNLTYNTLIHGHCRLQEIDRAYELLEEMKSNDFVPD 326

Query: 368 VITYNTLLSGLFQAGQAGYAQKLFDEMK-LYNVEPDLSTYNILIDGLCKNNCVQEAVKLF 426
           + TY+ L++GL +A +   A+ L   ++   +  P++ +YN LIDG  K   V +A +LF
Sbjct: 327 IFTYDILIAGLCRAKRLSEARDLLGTLRNEDDCTPNVVSYNTLIDGFSKAARVNDAYQLF 386

Query: 427 HMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRK 486
             +        +  ++ LI GLC AGR   A     ++  K ++P V  YS +I GLCR 
Sbjct: 387 LEMVTAGQHPDVVTYSTLIRGLCNAGRASEAHSYLEEMVGKKILPKVPVYSSVISGLCRA 446

Query: 487 GKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAE-PERNLVPDD 545
           G+L+ A+     M  NGC PN+  +N+L++G     KT ++ +   ++ E  ER   PD 
Sbjct: 447 GELDAASTVFDSMVANGCQPNLAVYNSLIYGLC---KTGRLCDAKLRVKEMTERGCSPDG 503

Query: 546 TTFSIVV 552
            T+  ++
Sbjct: 504 VTYGTLI 510



 Score = 62.0 bits (149), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 38/131 (29%), Positives = 64/131 (48%), Gaps = 7/131 (5%)

Query: 434 FEFGIEIFNCLIDGLCKAGRLDNAWELF-HKLPQKGLVPTVVTYSIMIHGLCRKGKLEKA 492
           F   +  +NC  + L + G+ + A+ LF  K PQ+ L+P  +TY I+I GLC  GKL+ A
Sbjct: 86  FRHTVHTYNCFYEALIRTGQCEEAYRLFKEKWPQE-LIPDSITYGILIRGLCNFGKLKLA 144

Query: 493 NDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVV 552
                 M   G  P V+T   L++   ++      +    KM+      +P   T++I++
Sbjct: 145 CSLYEEMVDRGLRPVVLTCKFLLNALCKSGNLELALRYFEKMSS-----IPCAATWTILI 199

Query: 553 DLLAKDEKYHE 563
           D L +  +  E
Sbjct: 200 DGLFRAIRVDE 210


>gi|226509112|ref|NP_001141010.1| uncharacterized protein LOC100273089 [Zea mays]
 gi|194702156|gb|ACF85162.1| unknown [Zea mays]
 gi|413937351|gb|AFW71902.1| hypothetical protein ZEAMMB73_497690 [Zea mays]
          Length = 567

 Score =  228 bits (581), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 135/449 (30%), Positives = 225/449 (50%), Gaps = 22/449 (4%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVS-IGLLPDFLTLNILINCFGNKERGLCVEN 131
           P +  +N +          DA     R+LV+ + + PD  T N LI       RGLC   
Sbjct: 132 PDVMVYNAMVAGYCGAGQLDAA----RRLVADMPVEPDAYTYNTLI-------RGLCGRG 180

Query: 132 RIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKT 191
           R   A  + ++M   G  PDV+TY  L+   C+      A++L  +M    ++ G     
Sbjct: 181 RTSNALAVLEDMFRRGCLPDVVTYTILLEATCKRSGYKQAMKLLDEM----HDKG--CAP 234

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
           +I +Y+++++ +C+EG V+ A E    +   G  P  V    ++ G   A  WE+   L 
Sbjct: 235 DIVTYNVVLNGICQEGRVEDAMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERWEDAEKLM 294

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
            EM   G  PN++TFN++I  LC+ G +  A  +LE M Q G  P+  +YN L+  +C  
Sbjct: 295 EEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQ 354

Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
            +I  A E    M S+GC   +VSYN L+   C+   V+ A+ L  Q+   G    +I+Y
Sbjct: 355 KKIHKAMEFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIELLHQLKDKGCSPVLISY 414

Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
           NT++ GL +AG+   A +L DEM    ++PD+ TY+ +  GLC+ + ++EAV+ F  ++ 
Sbjct: 415 NTVIDGLTKAGKTKEALELLDEMTSKGLQPDIITYSTIASGLCREDRIEEAVRTFCKVQD 474

Query: 432 NKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEK 491
                   ++N ++ GLCK     NA +LF  +   G +P   TY+I++ GL  +G +++
Sbjct: 475 MGIRPTAALYNAILLGLCKRRETHNAIDLFAYMISSGCMPNESTYTILVEGLAYEGLVKE 534

Query: 492 ANDFLLYMEKNGCAPNVVTFNTLMHGFLQ 520
           A +    +    C+  VV    +  G ++
Sbjct: 535 ARELFAQL----CSRGVVNKKLMKKGSIK 559



 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 137/511 (26%), Positives = 237/511 (46%), Gaps = 31/511 (6%)

Query: 27  SPRQIAAVSSPETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPIS---SFNLLFG 83
           +PR+ A+ +S   +L   +          L++A      +  + P  P +      L+  
Sbjct: 60  TPRRKASSASATERLRVLVRRG------ELDDALRLVDSLAGLNPPSPAAVGPCAALIKK 113

Query: 84  AVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNM 143
             A  R  DA     R L + G  PD +  N ++        G C   ++  A  L  +M
Sbjct: 114 LCASGRTADA----RRVLAASG--PDVMVYNAMVA-------GYCGAGQLDAARRLVADM 160

Query: 144 IAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSL 203
               V PD  TY TLI G C  G  S AL + + M    +  G +   ++ +Y+I++++ 
Sbjct: 161 ---PVEPDAYTYNTLIRGLCGRGRTSNALAVLEDM----FRRGCLP--DVVTYTILLEAT 211

Query: 204 CKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNL 263
           CK     +A +L  EM  +G  P +V    +++G C  G  E+       +   G  PN 
Sbjct: 212 CKRSGYKQAMKLLDEMHDKGCAPDIVTYNVVLNGICQEGRVEDAMEFLKNLPSYGCEPNT 271

Query: 264 LTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLS 323
           +++N+++  L    +  +A  L+E M  +G  P+  T+N L+   C  G ++ A E+   
Sbjct: 272 VSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQ 331

Query: 324 MHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQ 383
           M   GC    +SYN L++ +CK   + +AM     ++S G    +++YNTLL+ L + G+
Sbjct: 332 MPQYGCTPNSLSYNPLLHAFCKQKKIHKAMEFVELMVSRGCYPDIVSYNTLLTALCRNGE 391

Query: 384 AGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNC 443
              A +L  ++K     P L +YN +IDGL K    +EA++L   +     +  I  ++ 
Sbjct: 392 VDVAIELLHQLKDKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMTSKGLQPDIITYST 451

Query: 444 LIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNG 503
           +  GLC+  R++ A   F K+   G+ PT   Y+ ++ GLC++ +   A D   YM  +G
Sbjct: 452 IASGLCREDRIEEAVRTFCKVQDMGIRPTAALYNAILLGLCKRRETHNAIDLFAYMISSG 511

Query: 504 CAPNVVTFNTLMHGFLQNNKTSKVVELLHKM 534
           C PN  T+  L+ G        +  EL  ++
Sbjct: 512 CMPNESTYTILVEGLAYEGLVKEARELFAQL 542



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 118/436 (27%), Positives = 201/436 (46%), Gaps = 51/436 (11%)

Query: 156 GTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKEL 215
             LI   C +G  + A R+              S  ++  Y+ ++   C  G +D A+ L
Sbjct: 108 AALIKKLCASGRTADARRVLAA-----------SGPDVMVYNAMVAGYCGAGQLDAARRL 156

Query: 216 FLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCK 275
             +M    + P      TLI G C  G       +  +M   G  P+++T+ ++++  CK
Sbjct: 157 VADMP---VEPDAYTYNTLIRGLCGRGRTSNALAVLEDMFRRGCLPDVVTYTILLEATCK 213

Query: 276 GGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVS 335
                +A  LL+ M  +G  PD  TYN +++G C  GR++ A E   ++ S GC+   VS
Sbjct: 214 RSGYKQAMKLLDEMHDKGCAPDIVTYNVVLNGICQEGRVEDAMEFLKNLPSYGCEPNTVS 273

Query: 336 YNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMK 395
           YNI++ G       E+A  L  ++   G    V+T+N L+S L + G    A ++ ++M 
Sbjct: 274 YNIVLKGLFTAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQMP 333

Query: 396 LYN---------------------------VE--------PDLSTYNILIDGLCKNNCVQ 420
            Y                            VE        PD+ +YN L+  LC+N  V 
Sbjct: 334 QYGCTPNSLSYNPLLHAFCKQKKIHKAMEFVELMVSRGCYPDIVSYNTLLTALCRNGEVD 393

Query: 421 EAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMI 480
            A++L H L+       +  +N +IDGL KAG+   A EL  ++  KGL P ++TYS + 
Sbjct: 394 VAIELLHQLKDKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMTSKGLQPDIITYSTIA 453

Query: 481 HGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERN 540
            GLCR+ ++E+A      ++  G  P    +N ++ G  +  +T   ++L   M      
Sbjct: 454 SGLCREDRIEEAVRTFCKVQDMGIRPTAALYNAILLGLCKRRETHNAIDLFAYMI--SSG 511

Query: 541 LVPDDTTFSIVVDLLA 556
            +P+++T++I+V+ LA
Sbjct: 512 CMPNESTYTILVEGLA 527



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 86/324 (26%), Positives = 152/324 (46%), Gaps = 17/324 (5%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
           N  L+  C+ G   + +A  F   +      P   S+N++   +     ++       ++
Sbjct: 240 NVVLNGICQEG--RVEDAMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERWEDAEKLMEEM 297

Query: 102 VSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLING 161
              G  P+ +T N+LI+        LC    ++ A  + + M  +G  P+ ++Y  L++ 
Sbjct: 298 AHKGCPPNVVTFNMLISF-------LCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHA 350

Query: 162 FCRTGNLSVALRLHKKMVS-GDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMK 220
           FC+   +  A+   + MVS G Y        +I SY+ ++ +LC+ G VD A EL  ++K
Sbjct: 351 FCKQKKIHKAMEFVELMVSRGCY-------PDIVSYNTLLTALCRNGEVDVAIELLHQLK 403

Query: 221 GRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKIN 280
            +G +P ++   T+I G   AG  +E   L  EM   G +P+++T++ +   LC+  +I 
Sbjct: 404 DKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMTSKGLQPDIITYSTIASGLCREDRIE 463

Query: 281 EANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILI 340
           EA      +   G+ P    YN+++ G C       A ++F  M S GC     +Y IL+
Sbjct: 464 EAVRTFCKVQDMGIRPTAALYNAILLGLCKRRETHNAIDLFAYMISSGCMPNESTYTILV 523

Query: 341 NGYCKILNVEEAMSLYRQIISNGV 364
            G      V+EA  L+ Q+ S GV
Sbjct: 524 EGLAYEGLVKEARELFAQLCSRGV 547


>gi|359473390|ref|XP_002268680.2| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Vitis vinifera]
          Length = 748

 Score =  228 bits (580), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 147/479 (30%), Positives = 238/479 (49%), Gaps = 15/479 (3%)

Query: 56  LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRH-YDAVISFYRKLVSIGLLPDFLTLN 114
           L+EAR  F  M +      + S NL    ++++       +  + +   +G+  +  + N
Sbjct: 198 LDEARKLFDKMLNYGLLISVDSCNLFISHLSEDLDGIKIALKVFVEFPEVGVCWNTASYN 257

Query: 115 ILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRL 174
           I+ +        LC   R+ EA  L   M   G  PDVI+Y T+ING+C+ G L   L+L
Sbjct: 258 IITH-------SLCQLGRVVEAHQLLLQMELRGCIPDVISYSTVINGYCQVGELQRVLKL 310

Query: 175 HKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTL 234
            ++M       GL  K N ++Y+ +I  LCK G V +A+ +  EM   GI P  V+ TTL
Sbjct: 311 IEEMQI----KGL--KPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTL 364

Query: 235 IHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGL 294
           I GFC  GN      LF EM      P+ +T+  +I  LC+ G++ EA+ L   M+ + L
Sbjct: 365 IDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRL 424

Query: 295 NPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMS 354
            PD  TY +L+DGYC  G++  A  +   M   G    +V+Y  L +G CK   V+ A  
Sbjct: 425 EPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANE 484

Query: 355 LYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLC 414
           L  ++   G+   + TYN+L++GL +AG    A KL  +M++    PD  TY  L+D  C
Sbjct: 485 LLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYC 544

Query: 415 KNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVV 474
           K+  +  A +L   +   + +  +  FN L++G C +G L++  +L   + +KG++P   
Sbjct: 545 KSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNAT 604

Query: 475 TYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHK 533
           TY+ +I   C +  +    +    M   G  P+  T+N L+ G  +  +  K    LH+
Sbjct: 605 TYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCK-ARNMKEAWFLHR 662



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 143/456 (31%), Positives = 228/456 (50%), Gaps = 44/456 (9%)

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRT-GNLSVALRLHKKMVSGDYENGLISKT 191
           + EA  LF  M+ +G+   V +    I+        + +AL++  +      E G+    
Sbjct: 198 LDEARKLFDKMLNYGLLISVDSCNLFISHLSEDLDGIKIALKVFVEFP----EVGVC--W 251

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
           N  SY+II  SLC+ G V +A +L L+M+ RG  P V+  +T+I+G+C  G  + V  L 
Sbjct: 252 NTASYNIITHSLCQLGRVVEAHQLLLQMELRGCIPDVISYSTVINGYCQVGELQRVLKLI 311

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
            EM   G +PN  T+N +I  LCK GK+ EA  +L  MI  G+ PD   Y +L+DG+C +
Sbjct: 312 EEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKL 371

Query: 312 GRIDTAREIFLSM--------------------------------HSKGCKH---TVVSY 336
           G + +A  +F  M                                H   CK      V+Y
Sbjct: 372 GNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTY 431

Query: 337 NILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKL 396
             LI+GYCK   ++EA SL+ Q++  G+   ++TY  L  GL + G+   A +L  EM  
Sbjct: 432 TALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCR 491

Query: 397 YNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDN 456
             +E ++ TYN L++GLCK   + +AVKL   +E+  F      +  L+D  CK+  +  
Sbjct: 492 KGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVR 551

Query: 457 AWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMH 516
           A EL  ++  + L PTVVT++++++G C  G LE     L +M + G  PN  T+N+L+ 
Sbjct: 552 AHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIK 611

Query: 517 GFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVV 552
            +   N      E+   M    + +VPD  T++I++
Sbjct: 612 QYCIRNNMRATTEIYRGMC--AKGVVPDGNTYNILI 645



 Score =  198 bits (504), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 137/457 (29%), Positives = 217/457 (47%), Gaps = 56/457 (12%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
           P + S++ +     +      V+    ++   GL P+  T N +I         LC   +
Sbjct: 286 PDVISYSTVINGYCQVGELQRVLKLIEEMQIKGLKPNPYTYNGVILL-------LCKTGK 338

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRL----HKKMVSGDYENGLI 188
           + EA  + + MI+ G+ PD + Y TLI+GFC+ GN+S A RL     K+ +S D+     
Sbjct: 339 VAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDF----- 393

Query: 189 SKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVN 248
                 +Y+ +I  LC+ G V +A +LF EM  + + P  V  T LI G+C  G  +E  
Sbjct: 394 -----ITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAF 448

Query: 249 GLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGY 308
            L  +ML +G  PN++T+  + D LCK G+++ AN LL  M ++GL  + +TYNSL++G 
Sbjct: 449 SLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGL 508

Query: 309 CLVGRIDTAREIFLSMHSKG---------------CKH--------------------TV 333
           C  G ID A ++   M   G               CK                     TV
Sbjct: 509 CKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTV 568

Query: 334 VSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDE 393
           V++N+L+NG+C    +E+   L + ++  G+     TYN+L+             +++  
Sbjct: 569 VTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRG 628

Query: 394 MKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGR 453
           M    V PD +TYNILI G CK   ++EA  L   +    F   +  +N LI G  K  +
Sbjct: 629 MCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKK 688

Query: 454 LDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLE 490
              A ELF ++ ++GLV     Y+I       +GK+E
Sbjct: 689 FLEARELFEQMRREGLVADREIYNIFADINYDEGKME 725



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 128/427 (29%), Positives = 199/427 (46%), Gaps = 15/427 (3%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CK+G   + EA      M     +P    +  L     K  +  +    + ++    + P
Sbjct: 334 CKTG--KVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISP 391

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           DF+T   +I C      GLC   R+ EA  LF  M+   + PD +TY  LI+G+C+ G +
Sbjct: 392 DFITYTAVI-C------GLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKM 444

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
             A  LH +M+    + GL    NI +Y+ + D LCK G VD A EL  EM  +G+   +
Sbjct: 445 KEAFSLHNQML----QMGLTP--NIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNI 498

Query: 229 VVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLEL 288
               +L++G C AGN ++   L  +M   G  P+ +T+  ++D  CK  ++  A+ LL  
Sbjct: 499 YTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQ 558

Query: 289 MIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILN 348
           M+ R L P   T+N LM+G+C+ G ++   ++   M  KG      +YN LI  YC   N
Sbjct: 559 MLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNN 618

Query: 349 VEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNI 408
           +     +YR + + GV     TYN L+ G  +A     A  L  +M        +S+YN 
Sbjct: 619 MRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNA 678

Query: 409 LIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKG 468
           LI G  K     EA +LF  +         EI+N   D     G+++   EL  +  +K 
Sbjct: 679 LIKGFYKRKKFLEARELFEQMRREGLVADREIYNIFADINYDEGKMELTLELCDEAIEKC 738

Query: 469 LVPTVVT 475
           LV  + T
Sbjct: 739 LVGDIQT 745



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 107/394 (27%), Positives = 176/394 (44%), Gaps = 50/394 (12%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CK G  N++ A   F  M   + SP   ++  +   + +          + ++V   L P
Sbjct: 369 CKLG--NVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEP 426

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           D +T   LI+       G C E ++KEA  L   M+  G+ P+++TY  L +G C+ G +
Sbjct: 427 DEVTYTALID-------GYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEV 479

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
             A  L  +M     E       NI++Y+ +++ LCK G +D+A +L  +M+  G +P  
Sbjct: 480 DTANELLHEMCRKGLE------LNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDA 533

Query: 229 VVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLEL 288
           V  TTL+  +C +      + L  +MLD   +P ++TFNV+++  C  G + +   LL+ 
Sbjct: 534 VTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKW 593

Query: 289 MIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKG---------------CKH-- 331
           M+++G+ P+  TYNSL+  YC+   +    EI+  M +KG               CK   
Sbjct: 594 MLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARN 653

Query: 332 ------------------TVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNT 373
                             TV SYN LI G+ K     EA  L+ Q+   G+      YN 
Sbjct: 654 MKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVADREIYNI 713

Query: 374 LLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYN 407
                +  G+     +L DE     +  D+ T N
Sbjct: 714 FADINYDEGKMELTLELCDEAIEKCLVGDIQTKN 747



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 69/279 (24%), Positives = 116/279 (41%), Gaps = 30/279 (10%)

Query: 42  NEFLHENCKSGII-----------------NLNEARYFFGYMTHMQPSPPISSFNLLFGA 84
           NE LHE C+ G+                  N+++A      M      P   ++  L  A
Sbjct: 483 NELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDA 542

Query: 85  VAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMI 144
             K+R         R+++   L P  +T N+L+N       G C+   +++   L K M+
Sbjct: 543 YCKSREMVRAHELLRQMLDRELQPTVVTFNVLMN-------GFCMSGMLEDGEKLLKWML 595

Query: 145 AFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLC 204
             G+ P+  TY +LI  +C   N+     +++ M +     G++   N  +Y+I+I   C
Sbjct: 596 EKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCA----KGVVPDGN--TYNILIKGHC 649

Query: 205 KEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLL 264
           K   + +A  L  +M G+G N  V     LI GF     + E   LF +M   G   +  
Sbjct: 650 KARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVADRE 709

Query: 265 TFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNS 303
            +N+  D     GK+     L +  I++ L  D  T N+
Sbjct: 710 IYNIFADINYDEGKMELTLELCDEAIEKCLVGDIQTKNT 748



 Score = 65.5 bits (158), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 43/164 (26%), Positives = 78/164 (47%), Gaps = 38/164 (23%)

Query: 440 IFNCLIDGLCKAGRLDNAWELFHKL----------------------------------- 464
           +F+     L +AG LD A +LF K+                                   
Sbjct: 184 VFDIFFQVLVEAGMLDEARKLFDKMLNYGLLISVDSCNLFISHLSEDLDGIKIALKVFVE 243

Query: 465 -PQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNK 523
            P+ G+     +Y+I+ H LC+ G++ +A+  LL ME  GC P+V++++T+++G+ Q  +
Sbjct: 244 FPEVGVCWNTASYNIITHSLCQLGRVVEAHQLLLQMELRGCIPDVISYSTVINGYCQVGE 303

Query: 524 TSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAV 567
             +V++L+ +M    + L P+  T++ V+ LL K  K  E   V
Sbjct: 304 LQRVLKLIEEMQ--IKGLKPNPYTYNGVILLLCKTGKVAEAERV 345


>gi|302826367|ref|XP_002994672.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
 gi|300137182|gb|EFJ04264.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
          Length = 816

 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 134/439 (30%), Positives = 221/439 (50%), Gaps = 15/439 (3%)

Query: 126 GLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYEN 185
           GLC  +RI EA  +F+ M    V PD  +YG LI+G  + G L+ A  L +K++     +
Sbjct: 297 GLCQNDRIDEAVQMFEKMNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLL----HS 352

Query: 186 GLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWE 245
           G+   T   +Y+ +I  LC     D A+ELF +M  RG  P+ V    +I   C  G  E
Sbjct: 353 GVTPST--VAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLE 410

Query: 246 EVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLM 305
           E   L  +M++ G  P+++T+N ++D LCK  ++ EA  L   M + G  P+R ++N+++
Sbjct: 411 EACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTII 470

Query: 306 ---------DGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLY 356
                    D  C  G++D A  +   M   G    VV+Y+ LI+G C I  V++A  L 
Sbjct: 471 LGLCQQSKIDQACQRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLL 530

Query: 357 RQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKN 416
             ++    + TV+T NTL+ GL +AG+   A+++ D M      PD+ TYN L+ G C+ 
Sbjct: 531 EDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRA 590

Query: 417 NCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTY 476
              + A +L   +        +  +  L+ GLCKA RL  A  +F ++   G  P + TY
Sbjct: 591 GQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTY 650

Query: 477 SIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAE 536
           + +I G C  G+++        M   G +P+ V + TL     ++ ++++ +E+L +  E
Sbjct: 651 TALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRE 710

Query: 537 PERNLVPDDTTFSIVVDLL 555
             R+    D  +   VD L
Sbjct: 711 SLRSEAWGDEVYRFAVDGL 729



 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 142/463 (30%), Positives = 231/463 (49%), Gaps = 30/463 (6%)

Query: 49  CKSGIINLNEARYFFG------YMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLV 102
           CK+G   + EA   FG        +     P +  +N++   + +N   D  +  + K+ 
Sbjct: 258 CKAG--RVEEAVRLFGDRELPSSSSSSSSPPSLRGYNIVILGLCQNDRIDEAVQMFEKMN 315

Query: 103 SIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGF 162
              + PD  +  ILI+       GL    ++ +A  LF+ ++  GV P  + Y +LI+G 
Sbjct: 316 ERNVSPDSWSYGILID-------GLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGL 368

Query: 163 CRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGR 222
           C   +   A  L   M      N      +  +Y+++ID+ CK G++++A +L  +M   
Sbjct: 369 CMANSFDDARELFADM------NRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIED 422

Query: 223 GINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMI---------DCL 273
           G  P VV   T++ G C +   EE   LF EM  LG  PN  + N +I         D  
Sbjct: 423 GHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQA 482

Query: 274 CKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTV 333
           C+ GK++EA  LL+ M   G  PD  TY++L+ G C + R+D AR +   M  + CK TV
Sbjct: 483 CQRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTV 542

Query: 334 VSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDE 393
           V+ N LI+G CK   ++EA  +   ++S+G    V+TYNTL+ G  +AGQ   A++L  +
Sbjct: 543 VTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSD 602

Query: 394 MKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGR 453
           M    + P++ TY  L+ GLCK N + EA  +F  ++ +     +  +  LI G C AG+
Sbjct: 603 MVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQ 662

Query: 454 LDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFL 496
           +D   +LF ++   G+ P  V Y  +   LC+ G+  +A + L
Sbjct: 663 VDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEIL 705



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 133/447 (29%), Positives = 214/447 (47%), Gaps = 12/447 (2%)

Query: 55  NLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLN 114
            LN+AR  F  + H   +P   ++  L   +     +D     +  +   G  P  +T N
Sbjct: 338 KLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYN 397

Query: 115 ILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRL 174
           ++I+         C    ++EA  L K MI  G  PDV+TY T+++G C++  +  AL L
Sbjct: 398 VMID-------ASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLL 450

Query: 175 HKKMVS-GDYENGLISKTNIFS--YSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVC 231
             +M   G   N     T I        ID  C+ G +D+A  L   M   G  P VV  
Sbjct: 451 FNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQRGKLDEAFRLLKRMTDDGHVPDVVTY 510

Query: 232 TTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQ 291
           +TLI G C     ++   L  +M+    +P ++T N +I  LCK G+I EA  +L+ M+ 
Sbjct: 511 STLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVS 570

Query: 292 RGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEE 351
            G +PD  TYN+L+ G+C  G+ + ARE+   M ++G    VV+Y  L++G CK   + E
Sbjct: 571 SGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPE 630

Query: 352 AMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILID 411
           A  ++ Q+ S+G    + TY  L+ G   AGQ     KLF EM    + PD   Y  L  
Sbjct: 631 ACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAA 690

Query: 412 GLCKNNCVQEAVKLFH--MLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGL 469
            LCK+     A+++       +    +G E++   +DGL +AG+++ A      + + G 
Sbjct: 691 ELCKSGRSARALEILREGRESLRSEAWGDEVYRFAVDGLLEAGKMEMALGFVRDMVRGGQ 750

Query: 470 VPTVVTYSIMIHGLCRKGKLEKANDFL 496
           +P     + ++ GLC+ G+  +A   L
Sbjct: 751 LPAPERCASLVAGLCKSGQGGEARAVL 777



 Score =  205 bits (521), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 158/617 (25%), Positives = 269/617 (43%), Gaps = 117/617 (18%)

Query: 58  EARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILI 117
           EA   F  M     SP    +N+L  +++K +  +AV    + +V  G  PD  T   ++
Sbjct: 28  EAVKIFSLMEECH-SPYPDVYNVLIDSLSKRQETEAVKKMVQVMVDRGCFPDSFTFTTIL 86

Query: 118 NCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVIT----------------------- 154
            C      GLC   ++ EA  +   M +  + P   T                       
Sbjct: 87  -C------GLCKAGKMDEAELVMDEMRSRMIPPYFATSSFLAHELCLRGSMERAFQLLEI 139

Query: 155 --------YGTLINGFCRTGNLSVALRLHKKM-------VSGDYEN---GLISKTNI--- 193
                   Y  ++   C+   +  AL L + M        +G  ++   GL+    I   
Sbjct: 140 MPVANSSAYNIVVVALCKAARVDDALELARTMSEKRIPLAAGSLDSVLVGLMDSGRIDEA 199

Query: 194 -------------FSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCC 240
                         + +++++  C  G VDKA+EL   M      P  V   T++ G C 
Sbjct: 200 LQVYRENRREPCLVTLNVLLEGFCSRGQVDKARELLRAMPDEECAPDEVSYCTVLDGLCK 259

Query: 241 AGNWEEVNGLFIE------MLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGL 294
           AG  EE   LF +             P+L  +N++I  LC+  +I+EA  + E M +R +
Sbjct: 260 AGRVEEAVRLFGDRELPSSSSSSSSPPSLRGYNIVILGLCQNDRIDEAVQMFEKMNERNV 319

Query: 295 NPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSY------------------ 336
           +PD ++Y  L+DG    G+++ AR +F  +   G   + V+Y                  
Sbjct: 320 SPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARE 379

Query: 337 -----------------NILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLF 379
                            N++I+  CK   +EEA  L +++I +G    V+TYNT++ GL 
Sbjct: 380 LFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLC 439

Query: 380 QAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCV---------QEAVKLFHMLE 430
           ++ +   A  LF+EM+     P+  ++N +I GLC+ + +          EA +L   + 
Sbjct: 440 KSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQRGKLDEAFRLLKRMT 499

Query: 431 MNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLE 490
            +     +  ++ LI GLC   R+D+A  L   + ++   PTVVT + +IHGLC+ G+++
Sbjct: 500 DDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIK 559

Query: 491 KANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSI 550
           +A + L  M  +G +P+VVT+NTL+HG  +  +T +  ELL  M    R L P+  T++ 
Sbjct: 560 EAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMV--ARGLAPNVVTYTA 617

Query: 551 VVDLLAKDEKYHECSAV 567
           +V  L K  +  E   V
Sbjct: 618 LVSGLCKANRLPEACGV 634



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 131/446 (29%), Positives = 218/446 (48%), Gaps = 24/446 (5%)

Query: 125 RGLCVENRIKEATWLFKNMI-AFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDY 183
           +G C   R  EA  +F  M       PDV  Y  LI+   +           KKMV    
Sbjct: 18  QGWCNVGRTFEAVKIFSLMEECHSPYPDV--YNVLIDSLSKRQETEAV----KKMVQVMV 71

Query: 184 ENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGN 243
           + G    +  F+++ I+  LCK G +D+A+ +  EM+ R I P     + L H  C  G+
Sbjct: 72  DRGCFPDS--FTFTTILCGLCKAGKMDEAELVMDEMRSRMIPPYFATSSFLAHELCLRGS 129

Query: 244 WEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNS 303
            E       ++L++ P  N   +N+++  LCK  ++++A  L   M ++ +     + +S
Sbjct: 130 MERA----FQLLEIMPVANSSAYNIVVVALCKAARVDDALELARTMSEKRIPLAAGSLDS 185

Query: 304 LMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNG 363
           ++ G    GRID A +++     + C   +V+ N+L+ G+C    V++A  L R +    
Sbjct: 186 VLVGLMDSGRIDEALQVYRENRREPC---LVTLNVLLEGFCSRGQVDKARELLRAMPDEE 242

Query: 364 VRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPD------LSTYNILIDGLCKNN 417
                ++Y T+L GL +AG+   A +LF + +L +          L  YNI+I GLC+N+
Sbjct: 243 CAPDEVSYCTVLDGLCKAGRVEEAVRLFGDRELPSSSSSSSSPPSLRGYNIVILGLCQND 302

Query: 418 CVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYS 477
            + EAV++F  +           +  LIDGL KAG+L++A  LF KL   G+ P+ V Y+
Sbjct: 303 RIDEAVQMFEKMNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYT 362

Query: 478 IMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEP 537
            +IHGLC     + A +    M + GC P+ VT+N ++    +     +  +L+ KM E 
Sbjct: 363 SLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIED 422

Query: 538 ERNLVPDDTTFSIVVDLLAKDEKYHE 563
               VPD  T++ V+D L K  +  E
Sbjct: 423 --GHVPDVVTYNTVMDGLCKSSRVEE 446



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 109/410 (26%), Positives = 176/410 (42%), Gaps = 48/410 (11%)

Query: 24  LFKSPRQIAAVSSPETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFG 83
           LF    +     SP T  N  +  +CK G+  L EA      M      P + ++N +  
Sbjct: 380 LFADMNRRGCPPSPVT-YNVMIDASCKRGM--LEEACDLIKKMIEDGHVPDVVTYNTVMD 436

Query: 84  AVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILIN--CFGNKERGLCVENRIKEATWLFK 141
            + K+   +  +  + ++  +G  P+  + N +I   C  +K    C   ++ EA  L K
Sbjct: 437 GLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQRGKLDEAFRLLK 496

Query: 142 NMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIID 201
            M   G  PDV+TY TLI+G C    +  A  L + MV          K  + + + +I 
Sbjct: 497 RMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQ------CKPTVVTQNTLIH 550

Query: 202 SLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRP 261
            LCK G + +A+E+   M   G +P VV   TL+HG C AG  E    L  +M+  G  P
Sbjct: 551 GLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAP 610

Query: 262 NLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIF 321
           N++T+  ++  LCK  ++ EA G+   M   G  P+ FTY +L+ G+C  G++D   ++F
Sbjct: 611 NVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLF 670

Query: 322 LSMHSKGCKHTVVSYNILINGYCK---------IL------------------------- 347
             M   G     V Y  L    CK         IL                         
Sbjct: 671 GEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRESLRSEAWGDEVYRFAVDGLL 730

Query: 348 ---NVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEM 394
               +E A+   R ++  G         +L++GL ++GQ G A+ + +E+
Sbjct: 731 EAGKMEMALGFVRDMVRGGQLPAPERCASLVAGLCKSGQGGEARAVLEEI 780



 Score = 82.0 bits (201), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 66/254 (25%), Positives = 98/254 (38%), Gaps = 52/254 (20%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
           N  +H  CK+G I   EAR     M     SP + ++N L     +    +        +
Sbjct: 546 NTLIHGLCKAGRIK--EAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDM 603

Query: 102 VSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLING 161
           V+ GL P+ +T   L++       GLC  NR+ EA  +F  M + G  P++ TY  LI G
Sbjct: 604 VARGLAPNVVTYTALVS-------GLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILG 656

Query: 162 FCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLE--- 218
           FC  G +   L+L  +MV        IS  ++  Y  +   LCK G   +A E+  E   
Sbjct: 657 FCSAGQVDGGLKLFGEMVCAG-----ISPDHVV-YGTLAAELCKSGRSARALEILREGRE 710

Query: 219 ----------------------------------MKGRGINPAVVVCTTLIHGFCCAGNW 244
                                             M   G  PA   C +L+ G C +G  
Sbjct: 711 SLRSEAWGDEVYRFAVDGLLEAGKMEMALGFVRDMVRGGQLPAPERCASLVAGLCKSGQG 770

Query: 245 EEVNGLFIEMLDLG 258
            E   +  E++DL 
Sbjct: 771 GEARAVLEEIMDLA 784


>gi|242048026|ref|XP_002461759.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
 gi|241925136|gb|EER98280.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
          Length = 896

 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 154/573 (26%), Positives = 263/573 (45%), Gaps = 74/573 (12%)

Query: 56  LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIG---------- 105
           L++A      M  ++  P  S++ +L GA+A+ R  +  +   R++  +G          
Sbjct: 163 LDDAERVIAAMRRLKFRPAFSAYTVLIGAMAEARQPERALELLRQMQEVGYEVGVPLFTT 222

Query: 106 -------------------------LLPDFLTLNILINCFGNKERGLCVENRIKEATWLF 140
                                    L PD +  N+ I+CFG           +  A   F
Sbjct: 223 LVRALAREGRVEGALALVDEVKGSCLEPDIVLYNVCIDCFGKA-------GNVDMAWKFF 275

Query: 141 KNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKM--------------------VS 180
             + + G++PD ++Y ++I   C+ G LS A  L  +M                     +
Sbjct: 276 HELKSQGLKPDDVSYTSMIWVLCKAGRLSEAEELFGQMETERAVPCAYAYNTMIMGYGSA 335

Query: 181 GDYENG--LISK-------TNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVC 231
           G +EN   L+ +        ++ S++ I+  L K+  VD+A  LF  MK +   P     
Sbjct: 336 GQFENAYKLLDQLKERGCIPSVVSFNSILTCLGKKRKVDEALTLFEAMK-KDAEPNSSTY 394

Query: 232 TTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQ 291
             +I   C AG  EE   +  EM   G  PNLLT N+M+D LCK  K   A  + E   Q
Sbjct: 395 NIIIDMLCMAGKVEEAYMIRDEMEHAGLFPNLLTVNIMVDRLCKAKKFEPAYEMFETASQ 454

Query: 292 RGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEE 351
           RG NP+  TY SL+DG    G +D A  +F +M   G     V Y  LI  +      E+
Sbjct: 455 RGCNPNSVTYCSLIDGLGKKGNVDDAYRLFENMLDTGHNANPVVYTSLIRNFFMHGRKED 514

Query: 352 AMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILID 411
              +++++   G +  +   NT +  +F+AG     + +F+++K Y   PD+ +Y+ILI 
Sbjct: 515 GHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSYSILIH 574

Query: 412 GLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVP 471
           GL K    +E   +FH ++   F      +N ++DG CK+G+LD A+E+  ++  K + P
Sbjct: 575 GLTKAGQARETSSIFHAMKQQGFALDARAYNAVVDGFCKSGKLDKAYEVLEEMKVKRVPP 634

Query: 472 TVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELL 531
           TV TY  +I GL +  +L++A       +  G   NV+ +++L+ GF +  +  +   +L
Sbjct: 635 TVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYLIL 694

Query: 532 HKMAEPERNLVPDDTTFSIVVDLLAKDEKYHEC 564
            +M   ++ L P+  T++ ++D L K E+ +E 
Sbjct: 695 EEMM--KKGLTPNVYTWNSLMDALVKAEEINEA 725



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 131/482 (27%), Positives = 236/482 (48%), Gaps = 17/482 (3%)

Query: 55  NLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLN 114
            ++EA   F  M      P  S++N++   +      +       ++   GL P+ LT+N
Sbjct: 372 KVDEALTLFEAMKK-DAEPNSSTYNIIIDMLCMAGKVEEAYMIRDEMEHAGLFPNLLTVN 430

Query: 115 ILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRL 174
           I+++        LC   + + A  +F+     G  P+ +TY +LI+G  + GN+  A RL
Sbjct: 431 IMVD-------RLCKAKKFEPAYEMFETASQRGCNPNSVTYCSLIDGLGKKGNVDDAYRL 483

Query: 175 HKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTL 234
            + M+   +        N   Y+ +I +    G  +   ++F EM  RG  P + +  T 
Sbjct: 484 FENMLDTGH------NANPVVYTSLIRNFFMHGRKEDGHKIFKEMNRRGCQPDLTLLNTY 537

Query: 235 IHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGL 294
           +     AG+ E+   +F ++   G  P++ +++++I  L K G+  E + +   M Q+G 
Sbjct: 538 MDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSYSILIHGLTKAGQARETSSIFHAMKQQGF 597

Query: 295 NPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMS 354
             D   YN+++DG+C  G++D A E+   M  K    TV +Y  +I+G  KI  ++EA  
Sbjct: 598 ALDARAYNAVVDGFCKSGKLDKAYEVLEEMKVKRVPPTVATYGSIIDGLAKIDRLDEAYM 657

Query: 355 LYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLC 414
           L+ +  S G+   VI Y++L+ G  + G+   A  + +EM    + P++ T+N L+D L 
Sbjct: 658 LFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALV 717

Query: 415 KNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVV 474
           K   + EA+  F  ++  K       ++ LI+GLC+  + + A+  + ++ ++GLVP VV
Sbjct: 718 KAEEINEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLVPNVV 777

Query: 475 TYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKM 534
           TY+ MI GL + G +  A       + NG  P+  +FN L+ G    N+    +E  H  
Sbjct: 778 TYTTMIAGLAKVGNITDACSLFERFKANGGTPDAASFNALIEGMSHANRA---IEAYHVF 834

Query: 535 AE 536
            E
Sbjct: 835 EE 836



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 141/509 (27%), Positives = 242/509 (47%), Gaps = 18/509 (3%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CK+G   L+EA   FG M   +  P   ++N +         ++       +L   G +P
Sbjct: 298 CKAG--RLSEAEELFGQMETERAVPCAYAYNTMIMGYGSAGQFENAYKLLDQLKERGCIP 355

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
             ++ N ++ C G K        ++ EA  LF+ M      P+  TY  +I+  C  G +
Sbjct: 356 SVVSFNSILTCLGKK-------RKVDEALTLFEAMKK-DAEPNSSTYNIIIDMLCMAGKV 407

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
             A  +  +M       GL    N+ + +I++D LCK    + A E+F     RG NP  
Sbjct: 408 EEAYMIRDEMEHA----GLFP--NLLTVNIMVDRLCKAKKFEPAYEMFETASQRGCNPNS 461

Query: 229 VVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLEL 288
           V   +LI G    GN ++   LF  MLD G   N + +  +I      G+  + + + + 
Sbjct: 462 VTYCSLIDGLGKKGNVDDAYRLFENMLDTGHNANPVVYTSLIRNFFMHGRKEDGHKIFKE 521

Query: 289 MIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILN 348
           M +RG  PD    N+ MD     G ++  R IF  +   G    V SY+ILI+G  K   
Sbjct: 522 MNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSYSILIHGLTKAGQ 581

Query: 349 VEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNI 408
             E  S++  +   G       YN ++ G  ++G+   A ++ +EMK+  V P ++TY  
Sbjct: 582 ARETSSIFHAMKQQGFALDARAYNAVVDGFCKSGKLDKAYEVLEEMKVKRVPPTVATYGS 641

Query: 409 LIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKG 468
           +IDGL K + + EA  LF   +    E  + +++ LIDG  K GR+D A+ +  ++ +KG
Sbjct: 642 IIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYLILEEMMKKG 701

Query: 469 LVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVV 528
           L P V T++ ++  L +  ++ +A      M++  C+PN  T++ L++G  +  K +K  
Sbjct: 702 LTPNVYTWNSLMDALVKAEEINEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAF 761

Query: 529 ELLHKMAEPERNLVPDDTTFSIVVDLLAK 557
               +M   ++ LVP+  T++ ++  LAK
Sbjct: 762 VFWQEMQ--KQGLVPNVVTYTTMIAGLAK 788



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 104/363 (28%), Positives = 176/363 (48%), Gaps = 19/363 (5%)

Query: 98  YRKLVSIGLLPDFLTLNILINCF---GNKERGLCVENRIKEATWLFKNMIAFGVRPDVIT 154
           ++++   G  PD   LN  ++C    G+ E+G  +          F+++  +G  PDV +
Sbjct: 519 FKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAI----------FEDIKGYGFLPDVRS 568

Query: 155 YGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKE 214
           Y  LI+G  + G       +   M    +        +  +Y+ ++D  CK G +DKA E
Sbjct: 569 YSILIHGLTKAGQARETSSIFHAMKQQGF------ALDARAYNAVVDGFCKSGKLDKAYE 622

Query: 215 LFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLC 274
           +  EMK + + P V    ++I G       +E   LF E    G   N++ ++ +ID   
Sbjct: 623 VLEEMKVKRVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFG 682

Query: 275 KGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVV 334
           K G+I+EA  +LE M+++GL P+ +T+NSLMD       I+ A   F SM    C     
Sbjct: 683 KVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKAEEINEALICFQSMKEMKCSPNTY 742

Query: 335 SYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEM 394
           +Y+ILING C++    +A   ++++   G+   V+TY T+++GL + G    A  LF+  
Sbjct: 743 TYSILINGLCRVQKYNKAFVFWQEMQKQGLVPNVVTYTTMIAGLAKVGNITDACSLFERF 802

Query: 395 KLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRL 454
           K     PD +++N LI+G+   N   EA  +F    +      ++    L+D L KA  L
Sbjct: 803 KANGGTPDAASFNALIEGMSHANRAIEAYHVFEETRLKGCRINVKACISLLDALNKAECL 862

Query: 455 DNA 457
           + A
Sbjct: 863 EQA 865



 Score =  148 bits (374), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 95/345 (27%), Positives = 160/345 (46%), Gaps = 1/345 (0%)

Query: 199 IIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLG 258
           ++ +L +   +D A+ +   M+     PA    T LI     A   E    L  +M ++G
Sbjct: 153 LVSALVRTRRLDDAERVIAAMRRLKFRPAFSAYTVLIGAMAEARQPERALELLRQMQEVG 212

Query: 259 PRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAR 318
               +  F  ++  L + G++  A  L++ +    L PD   YN  +D +   G +D A 
Sbjct: 213 YEVGVPLFTTLVRALAREGRVEGALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAW 272

Query: 319 EIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGL 378
           + F  + S+G K   VSY  +I   CK   + EA  L+ Q+ +         YNT++ G 
Sbjct: 273 KFFHELKSQGLKPDDVSYTSMIWVLCKAGRLSEAEELFGQMETERAVPCAYAYNTMIMGY 332

Query: 379 FQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGI 438
             AGQ   A KL D++K     P + ++N ++  L K   V EA+ LF  ++ +  E   
Sbjct: 333 GSAGQFENAYKLLDQLKERGCIPSVVSFNSILTCLGKKRKVDEALTLFEAMKKDA-EPNS 391

Query: 439 EIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLY 498
             +N +ID LC AG+++ A+ +  ++   GL P ++T +IM+  LC+  K E A +    
Sbjct: 392 STYNIIIDMLCMAGKVEEAYMIRDEMEHAGLFPNLLTVNIMVDRLCKAKKFEPAYEMFET 451

Query: 499 MEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVP 543
             + GC PN VT+ +L+ G  +         L   M +   N  P
Sbjct: 452 ASQRGCNPNSVTYCSLIDGLGKKGNVDDAYRLFENMLDTGHNANP 496



 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 83/298 (27%), Positives = 138/298 (46%), Gaps = 3/298 (1%)

Query: 313 RIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYN 372
           R+D A  +  +M     +    +Y +LI    +    E A+ L RQ+   G    V  + 
Sbjct: 162 RLDDAERVIAAMRRLKFRPAFSAYTVLIGAMAEARQPERALELLRQMQEVGYEVGVPLFT 221

Query: 373 TLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMN 432
           TL+  L + G+   A  L DE+K   +EPD+  YN+ ID   K   V  A K FH L+  
Sbjct: 222 TLVRALAREGRVEGALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKSQ 281

Query: 433 KFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKA 492
             +     +  +I  LCKAGRL  A ELF ++  +  VP    Y+ MI G    G+ E A
Sbjct: 282 GLKPDDVSYTSMIWVLCKAGRLSEAEELFGQMETERAVPCAYAYNTMIMGYGSAGQFENA 341

Query: 493 NDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVV 552
              L  +++ GC P+VV+FN+++    +  K  + + L   M   +++  P+ +T++I++
Sbjct: 342 YKLLDQLKERGCIPSVVSFNSILTCLGKKRKVDEALTLFEAM---KKDAEPNSSTYNIII 398

Query: 553 DLLAKDEKYHECSAVSKSSYRACLYVTIFQPSSLGSMIGCTVRLMPQPEMSDTLGDDG 610
           D+L    K  E   +      A L+  +   + +   +    +  P  EM +T    G
Sbjct: 399 DMLCMAGKVEEAYMIRDEMEHAGLFPNLLTVNIMVDRLCKAKKFEPAYEMFETASQRG 456


>gi|225454300|ref|XP_002275491.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
           mitochondrial [Vitis vinifera]
 gi|297745328|emb|CBI40408.3| unnamed protein product [Vitis vinifera]
          Length = 765

 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 140/458 (30%), Positives = 226/458 (49%), Gaps = 18/458 (3%)

Query: 76  SSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKE 135
           +S N L  A+ + R +  + +   ++  + + P+ +T  ILIN        LC   R+ E
Sbjct: 306 ASCNALLTALGRAREFKRMNTLLAEMKEMDIQPNVVTFGILIN-------HLCKFRRVDE 358

Query: 136 ATWLFKNMIA-----FGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISK 190
           A  +F+ M       F V PDVITY TLI+G C+ G     L L ++M S          
Sbjct: 359 ALEVFEKMNGGESNGFLVEPDVITYNTLIDGLCKVGRQEEGLGLVERMRSQPR-----CM 413

Query: 191 TNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGL 250
            N  +Y+ +ID  CK  +++ A+ELF +M   G+ P VV   TL+ G C  G        
Sbjct: 414 PNTVTYNCLIDGYCKASMIEAARELFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEF 473

Query: 251 FIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCL 310
           F EM   G + N +T+  +I   C    I +A  L + M++ G +PD   Y +L+ G   
Sbjct: 474 FNEMQGKGLKGNAVTYTALIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQ 533

Query: 311 VGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVIT 370
            G++D A  +   M   G    +VS+N+LING+C+   ++EA  + +++ + G++   +T
Sbjct: 534 AGKLDRASFVLSKMKEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVT 593

Query: 371 YNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFH-ML 429
           YNTL+S   + G    A +L  +M    + P + TY  LI   C N  + EA+K+F  M 
Sbjct: 594 YNTLISHFSKTGDFSTAHRLMKKMVKEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRDMS 653

Query: 430 EMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKL 489
             +K      I+N LI+ LC+  ++D A  L   +  KG+ P   T++ M  GL  K  L
Sbjct: 654 STSKVPPNTVIYNILINSLCRKNQVDLALSLMDDMKVKGVKPNTNTFNAMFKGLQEKNWL 713

Query: 490 EKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKV 527
            KA + +  M ++ C P+ +T   L        +T+K+
Sbjct: 714 SKAFELMDRMTEHACNPDYITMEILTEWLSAVGETAKL 751



 Score =  224 bits (572), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 164/541 (30%), Positives = 247/541 (45%), Gaps = 69/541 (12%)

Query: 69  MQPS---PPISSF-NLLFGAVAKN----RHYDA--VISFYRKLVSIGLLPDFLTLNILIN 118
           +QP    PP S+  +++F A++K     R  D   ++    K     + P+ + L  LI+
Sbjct: 219 LQPKAEFPPNSNTGHIVFSALSKRDKVGRAVDEEEIVGLVSKFAEHEVFPNSIWLTQLIS 278

Query: 119 CFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKM 178
                   LC   R   A  +   ++  G   +  +   L+    R         L  +M
Sbjct: 279 -------RLCRSGRTDRAWDVLHGLMKLGGVMEAASCNALLTALGRAREFKRMNTLLAEM 331

Query: 179 VSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGIN-----PAVVVCTT 233
              D +       N+ ++ I+I+ LCK   VD+A E+F +M G   N     P V+   T
Sbjct: 332 KEMDIQ------PNVVTFGILINHLCKFRRVDEALEVFEKMNGGESNGFLVEPDVITYNT 385

Query: 234 LIHGFCCAGNWEEVNGLFIEMLDLGPR--PNLLTFNVMIDCLCKGGKINEANGLLELMIQ 291
           LI G C  G  EE  GL +E +   PR  PN +T+N +ID  CK   I  A  L + M +
Sbjct: 386 LIDGLCKVGRQEEGLGL-VERMRSQPRCMPNTVTYNCLIDGYCKASMIEAARELFDQMNK 444

Query: 292 RGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEE 351
            G+ P+  T N+L+DG C  GRI+ A E F  M  KG K   V+Y  LI  +C + N+E+
Sbjct: 445 DGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTALIRAFCNVNNIEK 504

Query: 352 AMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILID 411
           AM L+ +++  G     I Y TL+SGL QAG+   A  +  +MK     PD+ ++N+LI+
Sbjct: 505 AMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFSPDIVSFNVLIN 564

Query: 412 GLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVP 471
           G C+ N + EA ++   +E    +     +N LI    K G    A  L  K+ ++GLVP
Sbjct: 565 GFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTAHRLMKKMVKEGLVP 624

Query: 472 TVVTYSIMIH------------------------------------GLCRKGKLEKANDF 495
           TVVTY  +IH                                     LCRK +++ A   
Sbjct: 625 TVVTYGALIHAYCLNGNLDEAMKIFRDMSSTSKVPPNTVIYNILINSLCRKNQVDLALSL 684

Query: 496 LLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLL 555
           +  M+  G  PN  TFN +  G  + N  SK  EL+ +M E   N  PD  T  I+ + L
Sbjct: 685 MDDMKVKGVKPNTNTFNAMFKGLQEKNWLSKAFELMDRMTEHACN--PDYITMEILTEWL 742

Query: 556 A 556
           +
Sbjct: 743 S 743



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 137/471 (29%), Positives = 227/471 (48%), Gaps = 26/471 (5%)

Query: 48  NCKSGIINLNEARYF------FGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
           +C + +  L  AR F         M  M   P + +F +L   + K R  D  +  + K+
Sbjct: 307 SCNALLTALGRAREFKRMNTLLAEMKEMDIQPNVVTFGILINHLCKFRRVDEALEVFEKM 366

Query: 102 ---VSIGLL--PDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFG-VRPDVITY 155
               S G L  PD +T N LI+       GLC   R +E   L + M +     P+ +TY
Sbjct: 367 NGGESNGFLVEPDVITYNTLID-------GLCKVGRQEEGLGLVERMRSQPRCMPNTVTY 419

Query: 156 GTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKEL 215
             LI+G+C+   +  A  L  +M     ++G+    N+ + + ++D +CK G ++ A E 
Sbjct: 420 NCLIDGYCKASMIEAARELFDQM----NKDGV--PPNVVTLNTLVDGMCKHGRINGAVEF 473

Query: 216 FLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCK 275
           F EM+G+G+    V  T LI  FC   N E+   LF EML+ G  P+ + +  +I  L +
Sbjct: 474 FNEMQGKGLKGNAVTYTALIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQ 533

Query: 276 GGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVS 335
            GK++ A+ +L  M + G +PD  ++N L++G+C   ++D A E+   M + G K   V+
Sbjct: 534 AGKLDRASFVLSKMKEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVT 593

Query: 336 YNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMK 395
           YN LI+ + K  +   A  L ++++  G+  TV+TY  L+      G    A K+F +M 
Sbjct: 594 YNTLISHFSKTGDFSTAHRLMKKMVKEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRDMS 653

Query: 396 -LYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRL 454
               V P+   YNILI+ LC+ N V  A+ L   +++   +     FN +  GL +   L
Sbjct: 654 STSKVPPNTVIYNILINSLCRKNQVDLALSLMDDMKVKGVKPNTNTFNAMFKGLQEKNWL 713

Query: 455 DNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCA 505
             A+EL  ++ +    P  +T  I+   L   G+  K   F+   E +  A
Sbjct: 714 SKAFELMDRMTEHACNPDYITMEILTEWLSAVGETAKLKSFVQGYEVSASA 764



 Score =  131 bits (330), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 114/440 (25%), Positives = 182/440 (41%), Gaps = 90/440 (20%)

Query: 210 DKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTF-NV 268
           +K  +LF   K   I  +V   T LI    C G  + V+  F+   +L P   L    N+
Sbjct: 141 NKLLDLFKTSKSHKIPLSVNAATLLIR---CFGRAQMVDESFLVYNELCPSRRLTHIRNI 197

Query: 269 MIDCLCKGGKINEANGLLELMIQ--------------------------RGLN------- 295
           +ID L + G++++A  LL+ M+Q                          R ++       
Sbjct: 198 LIDVLFRKGRVDDALHLLDEMLQPKAEFPPNSNTGHIVFSALSKRDKVGRAVDEEEIVGL 257

Query: 296 ----------PDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNIL------ 339
                     P+      L+   C  GR D A ++   +   G      S N L      
Sbjct: 258 VSKFAEHEVFPNSIWLTQLISRLCRSGRTDRAWDVLHGLMKLGGVMEAASCNALLTALGR 317

Query: 340 -----------------------------INGYCKILNVEEAMSLYRQI---ISNG--VR 365
                                        IN  CK   V+EA+ ++ ++    SNG  V 
Sbjct: 318 AREFKRMNTLLAEMKEMDIQPNVVTFGILINHLCKFRRVDEALEVFEKMNGGESNGFLVE 377

Query: 366 QTVITYNTLLSGLFQAGQAGYAQKLFDEMKLY-NVEPDLSTYNILIDGLCKNNCVQEAVK 424
             VITYNTL+ GL + G+      L + M+      P+  TYN LIDG CK + ++ A +
Sbjct: 378 PDVITYNTLIDGLCKVGRQEEGLGLVERMRSQPRCMPNTVTYNCLIDGYCKASMIEAARE 437

Query: 425 LFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLC 484
           LF  +  +     +   N L+DG+CK GR++ A E F+++  KGL    VTY+ +I   C
Sbjct: 438 LFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTALIRAFC 497

Query: 485 RKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPD 544
               +EKA +    M + GC+P+ + + TL+ G  Q  K  +   +L KM E      PD
Sbjct: 498 NVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEA--GFSPD 555

Query: 545 DTTFSIVVDLLAKDEKYHEC 564
             +F+++++   +  K  E 
Sbjct: 556 IVSFNVLINGFCRKNKLDEA 575


>gi|414882142|tpg|DAA59273.1| TPA: hypothetical protein ZEAMMB73_713491 [Zea mays]
          Length = 987

 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 153/518 (29%), Positives = 247/518 (47%), Gaps = 40/518 (7%)

Query: 78  FNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKER------------ 125
           +NL   ++ +    + +   Y  LV  GLLPD +T N +I  +  K              
Sbjct: 147 YNLALRSLLRFDMTEYMGKLYSHLVQEGLLPDTVTYNTMIMAYCKKGSLAIAHRYFCLLR 206

Query: 126 ----------------GLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLS 169
                           G C  + +++A WL   M   G R +  +Y  LI G C    + 
Sbjct: 207 ESGMQMDTYTCNALLLGYCRTSDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCEARCVR 266

Query: 170 VALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVV 229
            AL L   MV     +G     N+ +Y+++I  LCKEG +  A+ L  EM  RG+ P+V 
Sbjct: 267 EALVLVFMMV----HDG--CSLNLHTYTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVW 320

Query: 230 VCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELM 289
               +I G+C +G  ++  G+   M   G  P+  T+N +I  LC GGK++EA  LL   
Sbjct: 321 TYNAMIDGYCKSGRMKDALGIKALMEQNGCNPDDWTYNSLIYGLC-GGKLDEAEELLNGA 379

Query: 290 IQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNV 349
           I RG  P   T+ +L++GYC   RID A  +  +M S  CK  + +Y +LIN   K   +
Sbjct: 380 IARGFTPTVITFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQAYGVLINVLIKKCRL 439

Query: 350 EEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNIL 409
           +EA     ++ +NG+   V+TY +++ G  + G  G A ++F  M+     P+  TY  L
Sbjct: 440 KEAKETLNEMFANGLAPNVVTYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSL 499

Query: 410 IDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGL 469
           I GL ++  + +A+ L   ++ +    G+  +  LI G CK    DNA+ LF  + Q GL
Sbjct: 500 IYGLIQDKKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGL 559

Query: 470 VPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVE 529
            P    Y+++   LC+ G+ E+A  FL+   + G     VT+ +L+ GF +   T     
Sbjct: 560 TPDEQAYNVLTDALCKSGRAEEAYSFLV---RKGVVLTKVTYTSLVDGFSKAGNTDFAAV 616

Query: 530 LLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAV 567
           L+ KM         D  T+S+++  L K +K +E  ++
Sbjct: 617 LIEKMV--NEGCKADLYTYSVLLQALCKQKKLNEALSI 652



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 132/497 (26%), Positives = 236/497 (47%), Gaps = 34/497 (6%)

Query: 72  SPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVEN 131
           +P + +F  L     K    D  +     ++S     D     +LIN    K    C   
Sbjct: 385 TPTVITFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQAYGVLINVLIKK----C--- 437

Query: 132 RIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKT 191
           R+KEA      M A G+ P+V+TY ++I+G+C+ G +  AL + K M   ++E       
Sbjct: 438 RLKEAKETLNEMFANGLAPNVVTYTSIIDGYCKVGMVGAALEVFKLM---EHEG---CHP 491

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
           N ++Y  +I  L ++  + KA  L  +M+  GI P V+  TTLI G C    ++    LF
Sbjct: 492 NAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLF 551

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
             M   G  P+   +NV+ D LCK G+  EA   L   +++G+   + TY SL+DG+   
Sbjct: 552 EMMEQNGLTPDEQAYNVLTDALCKSGRAEEAYSFL---VRKGVVLTKVTYTSLVDGFSKA 608

Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
           G  D A  +   M ++GCK  + +Y++L+   CK   + EA+S+  Q+  +GV+  ++ Y
Sbjct: 609 GNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIVAY 668

Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
             ++S + + G+  +A+ LF+EM     +P  +TY + I   CK   ++EA  L   +E 
Sbjct: 669 TIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGRIEEAEHLIGEMER 728

Query: 432 NKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIH---------- 481
           +     +  +N  I+G    G +D A+    ++      P   TY +++           
Sbjct: 729 DGVTPDVVTYNIFINGCGHMGYIDRAFSTLKRMVDASCEPNCWTYWLLLKHFLKMSLINA 788

Query: 482 ------GLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMA 535
                 G+    +L      L  M K+G  P VVT+++++ GF +  +  +   LL  M 
Sbjct: 789 HYVDTSGMWNWIELNMVWQLLERMMKHGLNPTVVTYSSIIAGFCKATRLEEACVLLDHML 848

Query: 536 EPERNLVPDDTTFSIVV 552
              +++ P++  +++++
Sbjct: 849 --GKDISPNEEIYTMLI 863



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 123/483 (25%), Positives = 217/483 (44%), Gaps = 37/483 (7%)

Query: 52  GIINLNEARYFFGYMTHMQP---SPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           G+I   +       +T MQ    +P + ++  L     K   +D     +  +   GL P
Sbjct: 502 GLIQDKKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTP 561

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           D    N+L +        LC   R +EA   +  ++  GV    +TY +L++GF + GN 
Sbjct: 562 DEQAYNVLTD-------ALCKSGRAEEA---YSFLVRKGVVLTKVTYTSLVDGFSKAGNT 611

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
             A  L +KMV+         K ++++YS+++ +LCK+  +++A  +  +M   G+   +
Sbjct: 612 DFAAVLIEKMVNEG------CKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNI 665

Query: 229 VVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLEL 288
           V  T +I      G  +    LF EM+  G +P+  T+ V I   CK G+I EA  L+  
Sbjct: 666 VAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGRIEEAEHLIGE 725

Query: 289 MIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKI-- 346
           M + G+ PD  TYN  ++G   +G ID A      M    C+    +Y +L+  + K+  
Sbjct: 726 MERDGVTPDVVTYNIFINGCGHMGYIDRAFSTLKRMVDASCEPNCWTYWLLLKHFLKMSL 785

Query: 347 --------------LNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFD 392
                         + +     L  +++ +G+  TV+TY+++++G  +A +   A  L D
Sbjct: 786 INAHYVDTSGMWNWIELNMVWQLLERMMKHGLNPTVVTYSSIIAGFCKATRLEEACVLLD 845

Query: 393 EMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLF-HMLEMNKFEFGIEIFNCLIDGLCKA 451
            M   ++ P+   Y +LI   C      +AV     M+E   F+  +E ++ LI GLC  
Sbjct: 846 HMLGKDISPNEEIYTMLIKCCCDIKLFGKAVSFVTDMIEFG-FQPQLESYHYLIVGLCDE 904

Query: 452 GRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTF 511
           G  D A  LF  L         V + I+  GL + G ++  +  L  M+   C  +  ++
Sbjct: 905 GDYDRAKSLFCDLLGMDYNHNEVAWKILNDGLLKAGHVDFCSQLLAAMDNRHCRIDSESY 964

Query: 512 NTL 514
           + L
Sbjct: 965 SML 967



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 96/395 (24%), Positives = 158/395 (40%), Gaps = 42/395 (10%)

Query: 16  VSKVKLSSLFKSPRQIAAVSSPETQLNEFLHENCKSGIIN-------------LNEARYF 62
           ++KV  +SL     +          + + ++E CK+ +               LNEA   
Sbjct: 593 LTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSI 652

Query: 63  FGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGN 122
              MT       I ++ ++   + K   +D   S + +++S G  P   T  + I+ +  
Sbjct: 653 LDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSY-- 710

Query: 123 KERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGD 182
                C   RI+EA  L   M   GV PDV+TY   ING    G +  A    K+MV   
Sbjct: 711 -----CKIGRIEEAEHLIGEMERDGVTPDVVTYNIFINGCGHMGYIDRAFSTLKRMVDAS 765

Query: 183 YENGLISKTNIFSYSIIIDSLCKEGLVDK----------------AKELFLEMKGRGINP 226
            E       N ++Y +++    K  L++                   +L   M   G+NP
Sbjct: 766 CE------PNCWTYWLLLKHFLKMSLINAHYVDTSGMWNWIELNMVWQLLERMMKHGLNP 819

Query: 227 AVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLL 286
            VV  +++I GFC A   EE   L   ML     PN   + ++I C C      +A   +
Sbjct: 820 TVVTYSSIIAGFCKATRLEEACVLLDHMLGKDISPNEEIYTMLIKCCCDIKLFGKAVSFV 879

Query: 287 ELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKI 346
             MI+ G  P   +Y+ L+ G C  G  D A+ +F  +      H  V++ IL +G  K 
Sbjct: 880 TDMIEFGFQPQLESYHYLIVGLCDEGDYDRAKSLFCDLLGMDYNHNEVAWKILNDGLLKA 939

Query: 347 LNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQA 381
            +V+    L   + +   R    +Y+ L   + +A
Sbjct: 940 GHVDFCSQLLAAMDNRHCRIDSESYSMLTDSIREA 974


>gi|15234269|ref|NP_192906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75213756|sp|Q9T0D6.1|PP306_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g11690
 gi|4539460|emb|CAB39940.1| putative protein [Arabidopsis thaliana]
 gi|7267869|emb|CAB78212.1| putative protein [Arabidopsis thaliana]
 gi|91806660|gb|ABE66057.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332657639|gb|AEE83039.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 566

 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 123/372 (33%), Positives = 205/372 (55%), Gaps = 2/372 (0%)

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
           +++S+ I+I   C+ G ++K+ +L +E+   G +P VV+ TTLI G C  G  E+   LF
Sbjct: 162 DVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLF 221

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
            EM  LG   N  T+ V+I+ L K G   +   + E M + G+ P+ +TYN +M+  C  
Sbjct: 222 FEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKD 281

Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
           GR   A ++F  M  +G    +V+YN LI G C+ + + EA  +  Q+ S+G+   +ITY
Sbjct: 282 GRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITY 341

Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
           NTL+ G    G+ G A  L  ++K   + P L TYNIL+ G C+      A K+   +E 
Sbjct: 342 NTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEE 401

Query: 432 NKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEK 491
              +     +  LID   ++  ++ A +L   + + GLVP V TYS++IHG C KG++ +
Sbjct: 402 RGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNE 461

Query: 492 ANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIV 551
           A+     M +  C PN V +NT++ G+ +   + + ++LL +M E E  L P+  ++  +
Sbjct: 462 ASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKE--LAPNVASYRYM 519

Query: 552 VDLLAKDEKYHE 563
           +++L K+ K  E
Sbjct: 520 IEVLCKERKSKE 531



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 135/488 (27%), Positives = 247/488 (50%), Gaps = 17/488 (3%)

Query: 65  YMTHMQPSP-PISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNK 123
           Y+T  + S      + ++  +  +++  +  IS++ ++V  G +P         NCF N 
Sbjct: 83  YLTESETSKTKFRLYEVIINSYVQSQSLNLSISYFNEMVDNGFVPG-------SNCF-NY 134

Query: 124 ERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDY 183
                V +      W F N     V  DV ++G LI G C  G +  +  L  ++    +
Sbjct: 135 LLTFVVGSSSFNQWWSFFNENKSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGF 194

Query: 184 ENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGN 243
                   N+  Y+ +ID  CK+G ++KAK+LF EM   G+       T LI+G    G 
Sbjct: 195 S------PNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGV 248

Query: 244 WEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNS 303
            ++   ++ +M + G  PNL T+N +++ LCK G+  +A  + + M +RG++ +  TYN+
Sbjct: 249 KKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNT 308

Query: 304 LMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNG 363
           L+ G C   +++ A ++   M S G    +++YN LI+G+C +  + +A+SL R + S G
Sbjct: 309 LIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRG 368

Query: 364 VRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAV 423
           +  +++TYN L+SG  + G    A K+  EM+   ++P   TY ILID   +++ +++A+
Sbjct: 369 LSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAI 428

Query: 424 KLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGL 483
           +L   +E       +  ++ LI G C  G+++ A  LF  + +K   P  V Y+ MI G 
Sbjct: 429 QLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGY 488

Query: 484 CRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVP 543
           C++G   +A   L  ME+   APNV ++  ++    +  K+ +   L+ KM +    + P
Sbjct: 489 CKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDS--GIDP 546

Query: 544 DDTTFSIV 551
             +  S++
Sbjct: 547 STSILSLI 554



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 140/491 (28%), Positives = 251/491 (51%), Gaps = 18/491 (3%)

Query: 22  SSLFKSPRQIAAVSSPETQLNEF-LHE---NCKSGIINLNEARYFFGYMTHMQPSPPISS 77
           S  F S   +  ++  ET   +F L+E   N      +LN +  +F  M      P  + 
Sbjct: 72  SQFFTSSSLLHYLTESETSKTKFRLYEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNC 131

Query: 78  FNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEAT 137
           FN L   V  +  ++   SF+ +  S  +L D  +  ILI       +G C    I+++ 
Sbjct: 132 FNYLLTFVVGSSSFNQWWSFFNENKSKVVL-DVYSFGILI-------KGCCEAGEIEKSF 183

Query: 138 WLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYS 197
            L   +  FG  P+V+ Y TLI+G C+ G +  A  L  +M     + GL++  N  +Y+
Sbjct: 184 DLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMG----KLGLVA--NERTYT 237

Query: 198 IIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDL 257
           ++I+ L K G+  +  E++ +M+  G+ P +     +++  C  G  ++   +F EM + 
Sbjct: 238 VLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRER 297

Query: 258 GPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTA 317
           G   N++T+N +I  LC+  K+NEAN +++ M   G+NP+  TYN+L+DG+C VG++  A
Sbjct: 298 GVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKA 357

Query: 318 REIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSG 377
             +   + S+G   ++V+YNIL++G+C+  +   A  + +++   G++ + +TY  L+  
Sbjct: 358 LSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDT 417

Query: 378 LFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFG 437
             ++     A +L   M+   + PD+ TY++LI G C    + EA +LF  +     E  
Sbjct: 418 FARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPN 477

Query: 438 IEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLL 497
             I+N +I G CK G    A +L  ++ +K L P V +Y  MI  LC++ K ++A   + 
Sbjct: 478 EVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVE 537

Query: 498 YMEKNGCAPNV 508
            M  +G  P+ 
Sbjct: 538 KMIDSGIDPST 548



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 113/387 (29%), Positives = 197/387 (50%), Gaps = 13/387 (3%)

Query: 189 SKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVN 248
           SKT    Y +II+S  +   ++ +   F EM   G  P       L+     + ++ +  
Sbjct: 90  SKTKFRLYEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWW 149

Query: 249 GLFIE-----MLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNS 303
             F E     +LD+       +F ++I   C+ G+I ++  LL  + + G +P+   Y +
Sbjct: 150 SFFNENKSKVVLDV------YSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTT 203

Query: 304 LMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNG 363
           L+DG C  G I+ A+++F  M   G      +Y +LING  K    ++   +Y ++  +G
Sbjct: 204 LIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDG 263

Query: 364 VRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAV 423
           V   + TYN +++ L + G+   A ++FDEM+   V  ++ TYN LI GLC+   + EA 
Sbjct: 264 VFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEAN 323

Query: 424 KLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGL 483
           K+   ++ +     +  +N LIDG C  G+L  A  L   L  +GL P++VTY+I++ G 
Sbjct: 324 KVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGF 383

Query: 484 CRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVP 543
           CRKG    A   +  ME+ G  P+ VT+  L+  F +++   K ++L  +++  E  LVP
Sbjct: 384 CRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQL--RLSMEELGLVP 441

Query: 544 DDTTFSIVVDLLAKDEKYHECSAVSKS 570
           D  T+S+++       + +E S + KS
Sbjct: 442 DVHTYSVLIHGFCIKGQMNEASRLFKS 468


>gi|449507709|ref|XP_004163108.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Cucumis sativus]
          Length = 999

 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 162/565 (28%), Positives = 266/565 (47%), Gaps = 44/565 (7%)

Query: 35  SSPETQLN--EFLHENCKSGII---NLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNR 89
           S P + LN   F +     G I   N+ EA      M        + ++N + G +AK  
Sbjct: 336 SMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAG 395

Query: 90  HYDAVISFYRKLVSIGLLPDFLTLNILINCFGN--------------KER---------- 125
                +S + +++  G+ PD  T N+LI+ +                K R          
Sbjct: 396 EMAKAMSLFNEMLMAGIEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYS 455

Query: 126 ----GLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSG 181
               GLC  + +++A  +   MI  GV+P+V  YGTLI  + +     +A+ L K M++ 
Sbjct: 456 VLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIA- 514

Query: 182 DYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCA 241
              NG++   ++F Y+ +I  LC+   V++AK L ++M  +GI P        I+ +  +
Sbjct: 515 ---NGVLP--DLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKS 569

Query: 242 GNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTY 301
           G  +     F +ML  G  PN + + ++I   C  G   EA    + M+++GL PD   Y
Sbjct: 570 GEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAY 629

Query: 302 NSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIIS 361
           ++++      G+   A  +FL     G    V  YN LI+G+CK  ++E+A  LY +++ 
Sbjct: 630 SAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLH 689

Query: 362 NGVRQTVITYNTLLS--GLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCV 419
           NG+   ++ YNTL++  G  ++G    A KLFDEM    + PD   Y ILIDG  K   +
Sbjct: 690 NGINPNIVVYNTLINDYGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNL 749

Query: 420 QEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIM 479
           ++A+ LFH  +  K    +  FN LID  CK G++  A ELF  +  K L P +VTY+I+
Sbjct: 750 EKALSLFHEAQ-QKSVGSLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTIL 808

Query: 480 IHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPER 539
           I    +   +E+A    L ME     PN +T+ +L+  + Q     K++ L   M    R
Sbjct: 809 IDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDM--EAR 866

Query: 540 NLVPDDTTFSIVVDLLAKDEKYHEC 564
            +  D   + ++     K+ K  E 
Sbjct: 867 GIACDAIAYGVMASAYCKEGKSLEA 891



 Score =  221 bits (564), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 149/511 (29%), Positives = 249/511 (48%), Gaps = 24/511 (4%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
           P + ++N   G + +    D  +   + ++  GL PD  T  +L++       G C + R
Sbjct: 274 PNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVD-------GFCKQKR 326

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
            KEA  +F++M + G+ P+  TY  LI+GF + GN+  ALR+  +M++     GL  K N
Sbjct: 327 SKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMIT----RGL--KLN 380

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
           + +Y+ +I  + K G + KA  LF EM   GI P       LI G+  + +  +   L  
Sbjct: 381 VVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGIEPDTWTYNLLIDGYLKSHDMAKACELLA 440

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
           EM      P+  T++V+I  LC    + +AN +L+ MI+ G+ P+ F Y +L+  Y    
Sbjct: 441 EMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQES 500

Query: 313 RIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYN 372
           R + A E+   M + G    +  YN LI G C+   VEEA  L   +   G++    TY 
Sbjct: 501 RYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYG 560

Query: 373 TLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMN 432
             ++   ++G+   A++ F +M    + P+   Y ILI G C      EA+  F  +   
Sbjct: 561 AFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEK 620

Query: 433 KFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKA 492
                I  ++ +I  L K G+   A  +F K  + G+VP V  Y+ +I G C++G +EKA
Sbjct: 621 GLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKA 680

Query: 493 NDFLLYMEKNGCAPNVVTFNTLM--HGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSI 550
           +     M  NG  PN+V +NTL+  +G+ ++   ++  +L  +M    + + PD   + I
Sbjct: 681 SQLYDEMLHNGINPNIVVYNTLINDYGYCKSGNLTEAFKLFDEMI--SKGISPDGYIYCI 738

Query: 551 VVDLLAKD---EK----YHECSAVSKSSYRA 574
           ++D   K+   EK    +HE    S  S  A
Sbjct: 739 LIDGCGKEGNLEKALSLFHEAQQKSVGSLSA 769



 Score =  197 bits (502), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 131/425 (30%), Positives = 202/425 (47%), Gaps = 49/425 (11%)

Query: 149 RPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGL 208
           +P++ TY   I G C+TG +  AL + K M+    E GL    +  +Y++++D  CK+  
Sbjct: 273 KPNLFTYNAFIGGLCQTGAVDEALEVKKLMM----EKGL--GPDGHTYTLLVDGFCKQKR 326

Query: 209 VDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNV 268
             +AK +F  M   G+NP     T LI GF   GN EE   +  EM+  G + N++T+N 
Sbjct: 327 SKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNA 386

Query: 269 MIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKG 328
           MI  + K G++ +A  L   M+  G+ PD +TYN L+DGY     +  A E+   M ++ 
Sbjct: 387 MIGGIAKAGEMAKAMSLFNEMLMAGIEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARK 446

Query: 329 CKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQ 388
              +  +Y++LI+G C   ++++A  +  Q+I NGV+  V  Y TL+    Q  +   A 
Sbjct: 447 LTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAI 506

Query: 389 KLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIE--------- 439
           +L   M    V PDL  YN LI GLC+   V+EA     ML ++  E GI+         
Sbjct: 507 ELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEA----KMLLVDMGEKGIKPNAHTYGAF 562

Query: 440 ------------------------------IFNCLIDGLCKAGRLDNAWELFHKLPQKGL 469
                                         I+  LI G C  G    A   F  + +KGL
Sbjct: 563 INLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGL 622

Query: 470 VPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVE 529
           +P +  YS +IH L + GK ++A    L   K G  P+V  +N+L+ GF +     K  +
Sbjct: 623 IPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQ 682

Query: 530 LLHKM 534
           L  +M
Sbjct: 683 LYDEM 687



 Score =  192 bits (487), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 140/524 (26%), Positives = 231/524 (44%), Gaps = 76/524 (14%)

Query: 55  NLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLN 114
           +L +A      M      P +  +  L  A  +   Y+  I   + +++ G+LPD    N
Sbjct: 466 DLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYN 525

Query: 115 ILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRL 174
            LI        GLC   +++EA  L  +M   G++P+  TYG  IN + ++G + VA R 
Sbjct: 526 CLI-------IGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERY 578

Query: 175 HKKMVSGD-------------------------------YENGLISKTNIFSYSIIIDSL 203
            K M+S                                  E GLI   +I +YS II SL
Sbjct: 579 FKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIP--DIRAYSAIIHSL 636

Query: 204 CKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNL 263
            K G   +A  +FL+    G+ P V +  +LI GFC  G+ E+ + L+ EML  G  PN+
Sbjct: 637 SKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNI 696

Query: 264 LTFNVMID--CLCKGGKINEANGLLELMIQRGLNPDRFTY-------------------- 301
           + +N +I+    CK G + EA  L + MI +G++PD + Y                    
Sbjct: 697 VVYNTLINDYGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLF 756

Query: 302 --------------NSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKIL 347
                         NSL+D +C  G++  ARE+F  M  K     +V+Y ILI+ Y K  
Sbjct: 757 HEAQQKSVGSLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAE 816

Query: 348 NVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYN 407
            +EEA  L+  + +  +    +TY +LL    Q G       LF +M+   +  D   Y 
Sbjct: 817 MMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYG 876

Query: 408 ILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQK 467
           ++    CK     EA+KL +   +   +   ++F+ LI  LCK  ++    EL  ++ ++
Sbjct: 877 VMASAYCKEGKSLEALKLLNKSLVEGIKLEDDVFDALIFHLCKEKQISTVLELLSEMGKE 936

Query: 468 GLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTF 511
            L  +  T + ++ G  + G  ++A+  L  M++ G  P  ++ 
Sbjct: 937 ELSLSSKTCNTLLLGFYKSGNEDEASKVLGVMQRLGWVPTSLSL 980



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 122/425 (28%), Positives = 212/425 (49%), Gaps = 44/425 (10%)

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
           + EA+ +F   I+ G  P +I    L+    +   + +  +++  MV    E  ++   +
Sbjct: 188 LNEASSVFIASISEGFFPTLICCNNLMRDLLKANMMGLFWKVYGSMV----EAKIVP--D 241

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
           +++Y+ +I + CK G V K K +  EM+                   C            
Sbjct: 242 VYTYTNVIKAHCKVGDVIKGKMVLSEMEKE-----------------C------------ 272

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
                  +PNL T+N  I  LC+ G ++EA  + +LM+++GL PD  TY  L+DG+C   
Sbjct: 273 -------KPNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQK 325

Query: 313 RIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYN 372
           R   A+ IF SM S G      +Y  LI+G+ K  N+EEA+ +  ++I+ G++  V+TYN
Sbjct: 326 RSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYN 385

Query: 373 TLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMN 432
            ++ G+ +AG+   A  LF+EM +  +EPD  TYN+LIDG  K++ + +A +L   ++  
Sbjct: 386 AMIGGIAKAGEMAKAMSLFNEMLMAGIEPDTWTYNLLIDGYLKSHDMAKACELLAEMKAR 445

Query: 433 KFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKA 492
           K       ++ LI GLC +  L  A E+  ++ + G+ P V  Y  +I    ++ + E A
Sbjct: 446 KLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMA 505

Query: 493 NDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVV 552
            + L  M  NG  P++  +N L+ G  +  K  +   LL  M   E+ + P+  T+   +
Sbjct: 506 IELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMG--EKGIKPNAHTYGAFI 563

Query: 553 DLLAK 557
           +L +K
Sbjct: 564 NLYSK 568



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 115/458 (25%), Positives = 208/458 (45%), Gaps = 49/458 (10%)

Query: 56  LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNI 115
           + EA+     M      P   ++       +K+        +++ ++S G++P+ +   I
Sbjct: 537 VEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTI 596

Query: 116 LINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLH 175
           LI       +G C      EA   FK M+  G+ PD+  Y  +I+   + G    A+ + 
Sbjct: 597 LI-------KGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVF 649

Query: 176 KKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLI 235
            K +    + G++   ++F Y+ +I   CKEG ++KA +L+ EM   GINP +VV  TLI
Sbjct: 650 LKFL----KTGVVP--DVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLI 703

Query: 236 --HGFCCAGNWEEVNGLFIEMLDLGPRPN------------------------------- 262
             +G+C +GN  E   LF EM+  G  P+                               
Sbjct: 704 NDYGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKS 763

Query: 263 ---LLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTARE 319
              L  FN +ID  CK GK+ EA  L + M+ + L P+  TY  L+D Y     ++ A +
Sbjct: 764 VGSLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQ 823

Query: 320 IFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLF 379
           +FL M ++      ++Y  L+  Y +I N  + +SL++ + + G+    I Y  + S   
Sbjct: 824 LFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYC 883

Query: 380 QAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIE 439
           + G++  A KL ++  +  ++ +   ++ LI  LCK   +   ++L   +   +     +
Sbjct: 884 KEGKSLEALKLLNKSLVEGIKLEDDVFDALIFHLCKEKQISTVLELLSEMGKEELSLSSK 943

Query: 440 IFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYS 477
             N L+ G  K+G  D A ++   + + G VPT ++ +
Sbjct: 944 TCNTLLLGFYKSGNEDEASKVLGVMQRLGWVPTSLSLT 981



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 102/394 (25%), Positives = 174/394 (44%), Gaps = 21/394 (5%)

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
           + SYSI+   LC  GL+ +A  + LE   +   P + +  +L+    C   + E  G   
Sbjct: 120 LHSYSILAIRLCNSGLIHQADNM-LEKLLQTRKPPLEILDSLVR---C---YREFGG--- 169

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
                    NL  F++ ID     G +NEA+ +    I  G  P     N+LM       
Sbjct: 170 --------SNLTVFDIFIDKFRVLGFLNEASSVFIASISEGFFPTLICCNNLMRDLLKAN 221

Query: 313 RIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYN 372
            +    +++ SM        V +Y  +I  +CK+ +V +   +  + +    +  + TYN
Sbjct: 222 MMGLFWKVYGSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSE-MEKECKPNLFTYN 280

Query: 373 TLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMN 432
             + GL Q G    A ++   M    + PD  TY +L+DG CK    +EA  +F  +  +
Sbjct: 281 AFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSS 340

Query: 433 KFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKA 492
                   +  LIDG  K G ++ A  +  ++  +GL   VVTY+ MI G+ + G++ KA
Sbjct: 341 GLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKA 400

Query: 493 NDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVV 552
                 M   G  P+  T+N L+ G+L+++  +K  ELL +M    R L P   T+S+++
Sbjct: 401 MSLFNEMLMAGIEPDTWTYNLLIDGYLKSHDMAKACELLAEM--KARKLTPSPFTYSVLI 458

Query: 553 DLLAKDEKYHECSAVSKSSYRACLYVTIFQPSSL 586
             L       + + V     R  +   +F   +L
Sbjct: 459 SGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTL 492


>gi|15242446|ref|NP_198787.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75170916|sp|Q9FIX3.1|PP407_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g39710; AltName: Full=Protein EMBRYO DEFECTIVE 2745
 gi|10177971|dbj|BAB11377.1| unnamed protein product [Arabidopsis thaliana]
 gi|332007083|gb|AED94466.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 747

 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 155/522 (29%), Positives = 259/522 (49%), Gaps = 54/522 (10%)

Query: 76  SSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKE 135
           S F+L+  + ++    D  +S      + G +P  L+ N +++     +R       I  
Sbjct: 135 SVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRN------ISF 188

Query: 136 ATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGD------YENGLIS 189
           A  +FK M+   V P+V TY  LI GFC  GN+ VAL L  KM +          N LI 
Sbjct: 189 AENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLID 248

Query: 190 -----------------------KTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINP 226
                                  + N+ SY+++I+ LC+EG + +   +  EM  RG + 
Sbjct: 249 GYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSL 308

Query: 227 AVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLL 286
             V   TLI G+C  GN+ +   +  EML  G  P+++T+  +I  +CK G +N A   L
Sbjct: 309 DEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFL 368

Query: 287 ELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKI 346
           + M  RGL P+  TY +L+DG+   G ++ A  +   M+  G   +VV+YN LING+C  
Sbjct: 369 DQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVT 428

Query: 347 LNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTY 406
             +E+A+++   +   G+   V++Y+T+LSG  ++     A ++  EM    ++PD  TY
Sbjct: 429 GKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITY 488

Query: 407 NILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIF--NCLIDGLCKAGRLDNAWELFHKL 464
           + LI G C+    +EA  L+   EM +     + F    LI+  C  G L+ A +L +++
Sbjct: 489 SSLIQGFCEQRRTKEACDLYE--EMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEM 546

Query: 465 PQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKT 524
            +KG++P VVTYS++I+GL ++ +  +A   LL +      P+ VT++TL+     N + 
Sbjct: 547 VEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIEN-CSNIEF 605

Query: 525 SKVVELLH------KMAEPE--------RNLVPDDTTFSIVV 552
             VV L+        M E +        +N  PD T ++I++
Sbjct: 606 KSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMI 647



 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 147/536 (27%), Positives = 256/536 (47%), Gaps = 30/536 (5%)

Query: 55  NLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLN 114
           N++ A   F  M   Q SP + ++N+L        + D  ++ + K+ + G LP+ +T N
Sbjct: 185 NISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYN 244

Query: 115 ILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRL 174
            LI+       G C   +I +   L ++M   G+ P++I+Y  +ING CR G +     +
Sbjct: 245 TLID-------GYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFV 297

Query: 175 HKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTL 234
             +M    Y        +  +Y+ +I   CKEG   +A  +  EM   G+ P+V+  T+L
Sbjct: 298 LTEMNRRGYS------LDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSL 351

Query: 235 IHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGL 294
           IH  C AGN         +M   G  PN  T+  ++D   + G +NEA  +L  M   G 
Sbjct: 352 IHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGF 411

Query: 295 NPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMS 354
           +P   TYN+L++G+C+ G+++ A  +   M  KG    VVSY+ +++G+C+  +V+EA+ 
Sbjct: 412 SPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALR 471

Query: 355 LYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLC 414
           + R+++  G++   ITY++L+ G  +  +   A  L++EM    + PD  TY  LI+  C
Sbjct: 472 VKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYC 531

Query: 415 KNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVV 474
               +++A++L + +        +  ++ LI+GL K  R   A  L  KL  +  VP+ V
Sbjct: 532 MEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDV 591

Query: 475 TYSIMIH---------------GLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFL 519
           TY  +I                G C KG + +A+     M      P+   +N ++HG  
Sbjct: 592 TYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHC 651

Query: 520 QNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKSSYRAC 575
           +     K   L  +M +     +    T   +V  L K+ K +E ++V     R+C
Sbjct: 652 RAGDIRKAYTLYKEMVKS--GFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSC 705



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 110/362 (30%), Positives = 200/362 (55%), Gaps = 3/362 (0%)

Query: 193 IFSYSIIIDSLCKEGL-VDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
           + SY+ ++D+  +    +  A+ +F EM    ++P V     LI GFC AGN +    LF
Sbjct: 169 VLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLF 228

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
            +M   G  PN++T+N +ID  CK  KI++   LL  M  +GL P+  +YN +++G C  
Sbjct: 229 DKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCRE 288

Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
           GR+     +   M+ +G     V+YN LI GYCK  N  +A+ ++ +++ +G+  +VITY
Sbjct: 289 GRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITY 348

Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
            +L+  + +AG    A +  D+M++  + P+  TY  L+DG  +   + EA ++   +  
Sbjct: 349 TSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMND 408

Query: 432 NKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEK 491
           N F   +  +N LI+G C  G++++A  +   + +KGL P VV+YS ++ G CR   +++
Sbjct: 409 NGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDE 468

Query: 492 ANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIV 551
           A      M + G  P+ +T+++L+ GF +  +T +  +L  +M      L PD+ T++ +
Sbjct: 469 ALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRV--GLPPDEFTYTAL 526

Query: 552 VD 553
           ++
Sbjct: 527 IN 528



 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 147/541 (27%), Positives = 245/541 (45%), Gaps = 98/541 (18%)

Query: 55  NLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLN 114
           N++ A   F  M      P + ++N L     K R  D      R +   GL P+ ++ N
Sbjct: 220 NIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYN 279

Query: 115 ILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRL 174
           ++IN       GLC E R+KE +++   M   G   D +TY TLI G+C+ GN   AL +
Sbjct: 280 VVIN-------GLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVM 332

Query: 175 HKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTL 234
           H +M+     +GL    ++ +Y+ +I S+CK G +++A E   +M+ RG+ P     TTL
Sbjct: 333 HAEML----RHGLTP--SVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTL 386

Query: 235 IHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGL 294
           + GF   G   E   +  EM D G  P+++T+N +I+  C  GK+ +A  +LE M ++GL
Sbjct: 387 VDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGL 446

Query: 295 NPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMS 354
           +PD  +Y++++ G+C    +D A  +   M  KG K   ++Y+ LI G+C+    +EA  
Sbjct: 447 SPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACD 506

Query: 355 LYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLC 414
           LY +++  G+     TY  L++     G    A +L +EM    V PD+ TY++LI+GL 
Sbjct: 507 LYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLN 566

Query: 415 KNNCVQEAVKL---------------FHMLEMN--KFEFGIEI----------------- 440
           K +  +EA +L               +H L  N    EF   +                 
Sbjct: 567 KQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQ 626

Query: 441 ----------------FNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLC 484
                           +N +I G C+AG +  A+ L+ ++ + G +   VT   ++  L 
Sbjct: 627 VFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALH 686

Query: 485 RKGKLEKAN-----------------------------------DFLLYMEKNGCAPNVV 509
           ++GK+ + N                                   D L  M K+G  PN +
Sbjct: 687 KEGKVNELNSVIVHVLRSCELSEAEQAKVLVEINHREGNMDVVLDVLAEMAKDGFLPNGI 746

Query: 510 T 510
           +
Sbjct: 747 S 747



 Score =  204 bits (520), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 122/421 (28%), Positives = 215/421 (51%), Gaps = 9/421 (2%)

Query: 145 AFGVRPDVITYGTLINGFCRTG-NLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSL 203
           A G  P V++Y  +++   R+  N+S A  + K+M+            N+F+Y+I+I   
Sbjct: 162 AHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVS------PNVFTYNILIRGF 215

Query: 204 CKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNL 263
           C  G +D A  LF +M+ +G  P VV   TLI G+C     ++   L   M   G  PNL
Sbjct: 216 CFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNL 275

Query: 264 LTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLS 323
           +++NV+I+ LC+ G++ E + +L  M +RG + D  TYN+L+ GYC  G    A  +   
Sbjct: 276 ISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAE 335

Query: 324 MHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQ 383
           M   G   +V++Y  LI+  CK  N+  AM    Q+   G+     TY TL+ G  Q G 
Sbjct: 336 MLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGY 395

Query: 384 AGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNC 443
              A ++  EM      P + TYN LI+G C    +++A+ +   ++       +  ++ 
Sbjct: 396 MNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYST 455

Query: 444 LIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNG 503
           ++ G C++  +D A  +  ++ +KG+ P  +TYS +I G C + + ++A D    M + G
Sbjct: 456 VLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVG 515

Query: 504 CAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
             P+  T+  L++ +       K ++L ++M   E+ ++PD  T+S++++ L K  +  E
Sbjct: 516 LPPDEFTYTALINAYCMEGDLEKALQLHNEMV--EKGVLPDVVTYSVLINGLNKQSRTRE 573

Query: 564 C 564
            
Sbjct: 574 A 574


>gi|15240249|ref|NP_200948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171473|sp|Q9FLJ4.1|PP440_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g61400
 gi|9757861|dbj|BAB08495.1| unnamed protein product [Arabidopsis thaliana]
 gi|332010079|gb|AED97462.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 654

 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 144/472 (30%), Positives = 237/472 (50%), Gaps = 33/472 (6%)

Query: 69  MQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINC------FGN 122
           M+ SP   +   +   + + R +D+V   Y+ ++S GL+PD     +L  C      +  
Sbjct: 158 MKCSPDSKACLSILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSK 217

Query: 123 KERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGD 182
           KE+             L   M + G++P+V  Y   I   CR   +  A    +KM    
Sbjct: 218 KEK-------------LLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEA----EKMFELM 260

Query: 183 YENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAG 242
            ++G++   N+++YS +ID  CK G V +A  L+ E+    + P VVV  TL+ GFC A 
Sbjct: 261 KKHGVLP--NLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKAR 318

Query: 243 NWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYN 302
                  LF+ M+  G  PNL  +N +I   CK G + EA GLL  M    L+PD FTY 
Sbjct: 319 ELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYT 378

Query: 303 SLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISN 362
            L++G C+  ++  A  +F  M ++    +  +YN LI+GYCK  N+E+A+ L  ++ ++
Sbjct: 379 ILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTAS 438

Query: 363 GVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEA 422
           GV   +IT++TL+ G         A  L+ EM +  + PD+ TY  LID   K   ++EA
Sbjct: 439 GVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEA 498

Query: 423 VKLFHMLEMNKFEFGIE----IFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSI 478
           ++L+     +  E GI      F CL+DG  K GRL  A + + +  Q+      V ++ 
Sbjct: 499 LRLYS----DMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTC 554

Query: 479 MIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVEL 530
           +I GLC+ G + +A+ F   M   G  P++ ++ +++ G LQ  + +  + L
Sbjct: 555 LIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQEKRITDTMML 606



 Score =  189 bits (479), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 124/400 (31%), Positives = 197/400 (49%), Gaps = 9/400 (2%)

Query: 134 KEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNI 193
           +EA W+ + M      PD     +++NG  R          ++ M+S     GL+   +I
Sbjct: 149 EEALWVSREM---KCSPDSKACLSILNGLVRRRRFDSVWVDYQLMIS----RGLVPDVHI 201

Query: 194 FSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIE 253
             Y ++     K+GL  K ++L  EM   GI P V + T  I   C     EE   +F  
Sbjct: 202 --YFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFEL 259

Query: 254 MLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGR 313
           M   G  PNL T++ MID  CK G + +A GL + ++   L P+   + +L+DG+C    
Sbjct: 260 MKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARE 319

Query: 314 IDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNT 373
           + TAR +F+ M   G    +  YN LI+G+CK  N+ EA+ L  ++ S  +   V TY  
Sbjct: 320 LVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTI 379

Query: 374 LLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNK 433
           L++GL    Q   A +LF +MK   + P  +TYN LI G CK   +++A+ L   +  + 
Sbjct: 380 LINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASG 439

Query: 434 FEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKAN 493
            E  I  F+ LIDG C    +  A  L+ ++  KG+VP VVTY+ +I    ++  +++A 
Sbjct: 440 VEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEAL 499

Query: 494 DFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHK 533
                M + G  PN  TF  L+ GF +  + S  ++   +
Sbjct: 500 RLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQE 539



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 115/407 (28%), Positives = 192/407 (47%), Gaps = 15/407 (3%)

Query: 154 TYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAK 213
            +  LI  F   G    AL + ++M         +S         I++ L +    D   
Sbjct: 134 VFSLLIMEFLEMGLFEEALWVSREMKCSPDSKACLS---------ILNGLVRRRRFDSVW 184

Query: 214 ELFLEMKGRGINPAVVVCTTLIHGFCC--AGNWEEVNGLFIEMLDLGPRPNLLTFNVMID 271
             +  M  RG+ P V +   L    CC   G + +   L  EM  LG +PN+  + + I 
Sbjct: 185 VDYQLMISRGLVPDVHIYFVLFQ--CCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYIL 242

Query: 272 CLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKH 331
            LC+  K+ EA  + ELM + G+ P+ +TY++++DGYC  G +  A  ++  +       
Sbjct: 243 DLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLP 302

Query: 332 TVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLF 391
            VV +  L++G+CK   +  A SL+  ++  GV   +  YN L+ G  ++G    A  L 
Sbjct: 303 NVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLL 362

Query: 392 DEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKA 451
            EM+  N+ PD+ TY ILI+GLC  + V EA +LF  ++  +       +N LI G CK 
Sbjct: 363 SEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKE 422

Query: 452 GRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTF 511
             ++ A +L  ++   G+ P ++T+S +I G C    ++ A      M   G  P+VVT+
Sbjct: 423 YNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTY 482

Query: 512 NTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKD 558
             L+    +     + + L   M E    + P+D TF+ +VD   K+
Sbjct: 483 TALIDAHFKEANMKEALRLYSDMLEA--GIHPNDHTFACLVDGFWKE 527



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/374 (26%), Positives = 170/374 (45%), Gaps = 15/374 (4%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CK+G  N+ +A   +  +   +  P +  F  L     K R      S +  +V  G+ P
Sbjct: 280 CKTG--NVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDP 337

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           +    N LI+       G C    + EA  L   M +  + PDV TY  LING C    +
Sbjct: 338 NLYVYNCLIH-------GHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQV 390

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
           + A RL +KM     +N  I  ++  +Y+ +I   CKE  +++A +L  EM   G+ P +
Sbjct: 391 AEANRLFQKM-----KNERIFPSSA-TYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNI 444

Query: 229 VVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLEL 288
           +  +TLI G+C   + +   GL+ EM   G  P+++T+  +ID   K   + EA  L   
Sbjct: 445 ITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSD 504

Query: 289 MIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILN 348
           M++ G++P+  T+  L+DG+   GR+  A + +   + +      V +  LI G C+   
Sbjct: 505 MLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGY 564

Query: 349 VEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNI 408
           +  A   +  + S G+   + +Y ++L G  Q  +      L  +M    + P+L    +
Sbjct: 565 ILRASRFFSDMRSCGITPDICSYVSMLKGHLQEKRITDTMMLQCDMIKTGILPNLLVNQL 624

Query: 409 LIDGLCKNNCVQEA 422
           L      N  V+ A
Sbjct: 625 LARFYQANGYVKSA 638


>gi|302793330|ref|XP_002978430.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
 gi|300153779|gb|EFJ20416.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
          Length = 475

 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 135/395 (34%), Positives = 211/395 (53%), Gaps = 10/395 (2%)

Query: 127 LCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENG 186
           LC   R+  A  L + MI  G  PD+ T+  LIN  C+   +  A    + M      N 
Sbjct: 59  LCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGM------NR 112

Query: 187 LIS--KTNIFSYSIIIDSLCKEGLVDKAKELFLEM-KGRGINPAVVVCTTLIHGFCCAGN 243
            IS   ++ FSY+ +++SLCK   V +A  +F  M   R + P VV  + LI GFC    
Sbjct: 113 TISTRASSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDE 172

Query: 244 WEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNS 303
                 L+ +M+DL   PN+ T+N  ++ L + G+I +A G+ E MI  G +PD  TY++
Sbjct: 173 LGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYST 232

Query: 304 LMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNG 363
           L+ G+ L  + D A E+F +M S+GC+   V+YN L++G CK    +EA  L+R+++  G
Sbjct: 233 LIHGFSLARKHDQAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERG 292

Query: 364 VRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAV 423
                +TY TLL G    G+   A ++FDEM     +PD+  YN L+ G  +     EA 
Sbjct: 293 CDPDKVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEAR 352

Query: 424 KLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQK-GLVPTVVTYSIMIHG 482
           +LF ++   + +      N +IDGL KA RLD+A E+F ++ Q  G  P +VTY+ +I G
Sbjct: 353 QLFQVMVSRECKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFG 412

Query: 483 LCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHG 517
           LC + +L +A      +++   +P+   FN L+  
Sbjct: 413 LCGEQRLSEAMKVFKEIDRLKLSPDPHAFNVLLEA 447



 Score =  209 bits (531), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 123/393 (31%), Positives = 206/393 (52%), Gaps = 38/393 (9%)

Query: 92  DAVISFYRKLVSIGLLPDFLTLNILIN----------------------------CFGNK 123
           D+ +S    ++  G  PD  T ++LIN                            CF   
Sbjct: 66  DSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMNRTISTRASSCFSYN 125

Query: 124 E--RGLCVENRIKEATWLFKNMIA-FGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVS 180
                LC   ++ +A  +F  M++   V PDV++Y  LI+GFC+   L  A +L+K+M+ 
Sbjct: 126 SLLNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKLYKQMID 185

Query: 181 GDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCC 240
                 L    N+ +Y+  ++ L ++G +  A+ ++ EM   G +P V+  +TLIHGF  
Sbjct: 186 ------LNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLIHGFSL 239

Query: 241 AGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFT 300
           A   ++ + LF  M+  G RPN +T+N ++  LCK  K +EA+ L   M++RG +PD+ T
Sbjct: 240 ARKHDQAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDKVT 299

Query: 301 YNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQII 360
           Y +L+ G+C VG+I+ A E+F  M SKG    VV+YN L+ G+ +     EA  L++ ++
Sbjct: 300 YTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQLFQVMV 359

Query: 361 SNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKL-YNVEPDLSTYNILIDGLCKNNCV 419
           S   +   +++N ++ GL +A +   A ++F+ M+  +   PDL TYN LI GLC    +
Sbjct: 360 SRECKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRL 419

Query: 420 QEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAG 452
            EA+K+F  ++  K       FN L++ +  AG
Sbjct: 420 SEAMKVFKEIDRLKLSPDPHAFNVLLEAMYAAG 452



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 120/438 (27%), Positives = 226/438 (51%), Gaps = 17/438 (3%)

Query: 126 GLCVENRIKEATWLFKNMIAFGVRPDVITYGT---LINGFCRTGNLSVALRLHKKMVSGD 182
           GLC   +I++A    + M          + GT   +I   C+ G +  AL L + M+   
Sbjct: 20  GLCKSGKIEQAFEACRTMQESLSSSQPPSSGTCHSVIQELCKAGRVDSALSLLETMIKRG 79

Query: 183 YENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVC---TTLIHGFC 239
           Y        ++ ++S++I+ LCK   + +A+E FL+   R I+     C    +L++  C
Sbjct: 80  Y------CPDMATHSMLINELCKADKIQEAQE-FLQGMNRTISTRASSCFSYNSLLNSLC 132

Query: 240 CAGNWEEVNGLFIEML-DLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDR 298
            A    +   +F  M+ +    P++++++++ID  CK  ++  A  L + MI     P+ 
Sbjct: 133 KAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNV 192

Query: 299 FTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQ 358
            TYN+ ++G    GRI  A+ ++  M S GC   V++Y+ LI+G+      ++A  L+  
Sbjct: 193 TTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLIHGFSLARKHDQAHELFEA 252

Query: 359 IISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNC 418
           +IS G R   +TYN LL GL +  +   A +LF +M     +PD  TY  L+ G C    
Sbjct: 253 MISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDKVTYTTLLYGFCNVGK 312

Query: 419 VQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSI 478
           +++AV++F  +     +  +  +NCL+ G  +AG+   A +LF  +  +   P  V+++I
Sbjct: 313 IEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQLFQVMVSRECKPDTVSHNI 372

Query: 479 MIHGLCRKGKLEKANDFLLYMEKN-GCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEP 537
           MI GL +  +L+ A +    ME++ GC+P++VT+N+L+ G     + S+ +++  ++   
Sbjct: 373 MIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEI--D 430

Query: 538 ERNLVPDDTTFSIVVDLL 555
              L PD   F+++++ +
Sbjct: 431 RLKLSPDPHAFNVLLEAM 448



 Score =  192 bits (487), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 121/376 (32%), Positives = 193/376 (51%), Gaps = 10/376 (2%)

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVV---VCTTLIHGFCCAGNWEEVN 248
           N  +++  +  LCK G +++A E    M+    +        C ++I   C AG  +   
Sbjct: 10  NNVAWTAFLGGLCKSGKIEQAFEACRTMQESLSSSQPPSSGTCHSVIQELCKAGRVDSAL 69

Query: 249 GLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDR---FTYNSLM 305
            L   M+  G  P++ T +++I+ LCK  KI EA   L+ M  R ++      F+YNSL+
Sbjct: 70  SLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGM-NRTISTRASSCFSYNSLL 128

Query: 306 DGYCLVGRIDTAREIFLSMHS-KGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGV 364
           +  C   ++  A  IF +M S +     VVSY+ILI+G+CKI  +  A  LY+Q+I    
Sbjct: 129 NSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNC 188

Query: 365 RQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVK 424
              V TYN  L+GL + G+   AQ +++EM      PD+ TY+ LI G        +A +
Sbjct: 189 VPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLIHGFSLARKHDQAHE 248

Query: 425 LFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLC 484
           LF  +           +NCL+ GLCK  + D A ELF K+ ++G  P  VTY+ +++G C
Sbjct: 249 LFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDKVTYTTLLYGFC 308

Query: 485 RKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPD 544
             GK+E+A +    M   G  P+VV +N L+ GF +  K  +  +L   M    R   PD
Sbjct: 309 NVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQLFQVMV--SRECKPD 366

Query: 545 DTTFSIVVDLLAKDEK 560
             + +I++D L+K ++
Sbjct: 367 TVSHNIMIDGLSKAKR 382



 Score =  182 bits (461), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 116/424 (27%), Positives = 199/424 (46%), Gaps = 7/424 (1%)

Query: 153 ITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKA 212
           + +   + G C++G +  A    + M      +   S     S   +I  LCK G VD A
Sbjct: 12  VAWTAFLGGLCKSGKIEQAFEACRTMQESLSSSQPPSSGTCHS---VIQELCKAGRVDSA 68

Query: 213 KELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEM-LDLGPRPN-LLTFNVMI 270
             L   M  RG  P +   + LI+  C A   +E       M   +  R +   ++N ++
Sbjct: 69  LSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMNRTISTRASSCFSYNSLL 128

Query: 271 DCLCKGGKINEANGLLELMI-QRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGC 329
           + LCK  K+++A  +   M+ +R + PD  +Y+ L+DG+C +  +  A +++  M    C
Sbjct: 129 NSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNC 188

Query: 330 KHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQK 389
              V +YN  +NG  +   + +A  +Y ++IS G    VITY+TL+ G   A +   A +
Sbjct: 189 VPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLIHGFSLARKHDQAHE 248

Query: 390 LFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLC 449
           LF+ M      P+  TYN L+ GLCK +   EA +LF  +     +     +  L+ G C
Sbjct: 249 LFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDKVTYTTLLYGFC 308

Query: 450 KAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVV 509
             G+++ A E+F ++  KG  P VV Y+ ++ G  R GK  +A      M    C P+ V
Sbjct: 309 NVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQLFQVMVSRECKPDTV 368

Query: 510 TFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSK 569
           + N ++ G  +  +    VE+  +M E +    PD  T++ ++  L  +++  E   V K
Sbjct: 369 SHNIMIDGLSKAKRLDDAVEVFERM-EQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFK 427

Query: 570 SSYR 573
              R
Sbjct: 428 EIDR 431



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 74/275 (26%), Positives = 133/275 (48%), Gaps = 16/275 (5%)

Query: 39  TQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFY 98
           T  N FL+   + G I   +A+  +  M     SP + +++ L    +  R +D     +
Sbjct: 193 TTYNAFLNGLMRKGRIA--DAQGVYEEMISAGCSPDVITYSTLIHGFSLARKHDQAHELF 250

Query: 99  RKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTL 158
             ++S G  P+ +T N L++       GLC E++  EA  LF+ M+  G  PD +TY TL
Sbjct: 251 EAMISRGCRPNAVTYNCLLH-------GLCKESKPDEAHELFRKMVERGCDPDKVTYTTL 303

Query: 159 INGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLE 218
           + GFC  G +  A+ +  +MVS  ++       ++ +Y+ ++    + G   +A++LF  
Sbjct: 304 LYGFCNVGKIEQAVEVFDEMVSKGHD------PDVVAYNCLLKGFFRAGKPGEARQLFQV 357

Query: 219 MKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEM-LDLGPRPNLLTFNVMIDCLCKGG 277
           M  R   P  V    +I G   A   ++   +F  M  D G  P+L+T+N +I  LC   
Sbjct: 358 MVSRECKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQ 417

Query: 278 KINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
           +++EA  + + + +  L+PD   +N L++     G
Sbjct: 418 RLSEAMKVFKEIDRLKLSPDPHAFNVLLEAMYAAG 452



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 50/217 (23%), Positives = 86/217 (39%), Gaps = 37/217 (17%)

Query: 57  NEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNIL 116
           ++A   F  M      P   ++N L   + K    D     +RK+V  G  PD +T   L
Sbjct: 244 DQAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDKVTYTTL 303

Query: 117 INCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHK 176
           +        G C   +I++A  +F  M++ G  PDV+ Y  L+ GF R G    A +L +
Sbjct: 304 L-------YGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQLFQ 356

Query: 177 KMVSGDYENGLISKT------------------------------NIFSYSIIIDSLCKE 206
            MVS + +   +S                                ++ +Y+ +I  LC E
Sbjct: 357 VMVSRECKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGE 416

Query: 207 GLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGN 243
             + +A ++F E+    ++P       L+     AG+
Sbjct: 417 QRLSEAMKVFKEIDRLKLSPDPHAFNVLLEAMYAAGH 453


>gi|15240891|ref|NP_195731.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75174092|sp|Q9LFC5.1|PP360_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g01110
 gi|6759434|emb|CAB69839.1| putative protein [Arabidopsis thaliana]
 gi|28973740|gb|AAO64186.1| unknown protein [Arabidopsis thaliana]
 gi|110736884|dbj|BAF00399.1| hypothetical protein [Arabidopsis thaliana]
 gi|332002917|gb|AED90300.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 729

 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 141/535 (26%), Positives = 257/535 (48%), Gaps = 52/535 (9%)

Query: 56  LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNI 115
           L EA   F  +     +  I + N L G++ +    +     Y+++   G+  +  TLNI
Sbjct: 181 LREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNI 240

Query: 116 LINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLH 175
           ++N        LC + ++++       +   GV PD++TY TLI+ +   G +  A  L 
Sbjct: 241 MVN-------ALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELM 293

Query: 176 KKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLI 235
             M    +  G      +++Y+ +I+ LCK G  ++AKE+F EM   G++P      +L+
Sbjct: 294 NAMPGKGFSPG------VYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLL 347

Query: 236 HGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLN 295
              C  G+  E   +F +M      P+L+ F+ M+    + G +++A      + + GL 
Sbjct: 348 MEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLI 407

Query: 296 PDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYN------------------ 337
           PD   Y  L+ GYC  G I  A  +   M  +GC   VV+YN                  
Sbjct: 408 PDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKL 467

Query: 338 -----------------ILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQ 380
                            ILI+G+CK+ N++ AM L++++    +R  V+TYNTLL G  +
Sbjct: 468 FNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGK 527

Query: 381 AGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEI 440
            G    A++++ +M    + P   +Y+IL++ LC    + EA +++  +     +  + I
Sbjct: 528 VGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMI 587

Query: 441 FNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYM- 499
            N +I G C++G   +      K+  +G VP  ++Y+ +I+G  R+  + KA   +  M 
Sbjct: 588 CNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKME 647

Query: 500 -EKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
            E+ G  P+V T+N+++HGF + N+  +   +L KM   ER + PD +T++ +++
Sbjct: 648 EEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMI--ERGVNPDRSTYTCMIN 700



 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 140/470 (29%), Positives = 226/470 (48%), Gaps = 44/470 (9%)

Query: 135 EATW-LFKNMIAFGVRPDVITYGTLINGFCRTGNLS-VALRLHKKMVSGDYENGLISKTN 192
           E  W +++ +   GV  +V T   ++N  C+ G +  V   L +    G Y        +
Sbjct: 217 ELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVY-------PD 269

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
           I +Y+ +I +   +GL+++A EL   M G+G +P V    T+I+G C  G +E    +F 
Sbjct: 270 IVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFA 329

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
           EML  G  P+  T+  ++   CK G + E   +   M  R + PD   ++S+M  +   G
Sbjct: 330 EMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSG 389

Query: 313 RIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYN 372
            +D A   F S+   G     V Y ILI GYC+   +  AM+L  +++  G    V+TYN
Sbjct: 390 NLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYN 449

Query: 373 TLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMN 432
           T+L GL +    G A KLF+EM    + PD  T  ILIDG CK   +Q A++LF  ++  
Sbjct: 450 TILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEK 509

Query: 433 KFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKA 492
           +    +  +N L+DG  K G +D A E++  +  K ++PT ++YSI+++ LC KG L +A
Sbjct: 510 RIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEA 569

Query: 493 -----------------------------------NDFLLYMEKNGCAPNVVTFNTLMHG 517
                                                FL  M   G  P+ +++NTL++G
Sbjct: 570 FRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYG 629

Query: 518 FLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAV 567
           F++    SK   L+ KM E +  LVPD  T++ ++    +  +  E   V
Sbjct: 630 FVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVV 679



 Score =  211 bits (538), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 138/507 (27%), Positives = 241/507 (47%), Gaps = 19/507 (3%)

Query: 41  LNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRK 100
           LN  ++  CK G   + +   F   +      P I ++N L  A +     +        
Sbjct: 238 LNIMVNALCKDG--KMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNA 295

Query: 101 LVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLIN 160
           +   G  P   T N +IN       GLC   + + A  +F  M+  G+ PD  TY +L+ 
Sbjct: 296 MPGKGFSPGVYTYNTVIN-------GLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLM 348

Query: 161 GFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMK 220
             C+ G++    ++   M S D    L+       +S ++    + G +DKA   F  +K
Sbjct: 349 EACKKGDVVETEKVFSDMRSRDVVPDLVC------FSSMMSLFTRSGNLDKALMYFNSVK 402

Query: 221 GRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKIN 280
             G+ P  V+ T LI G+C  G       L  EML  G   +++T+N ++  LCK   + 
Sbjct: 403 EAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLG 462

Query: 281 EANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILI 340
           EA+ L   M +R L PD +T   L+DG+C +G +  A E+F  M  K  +  VV+YN L+
Sbjct: 463 EADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLL 522

Query: 341 NGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVE 400
           +G+ K+ +++ A  ++  ++S  +  T I+Y+ L++ L   G    A +++DEM   N++
Sbjct: 523 DGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIK 582

Query: 401 PDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWEL 460
           P +   N +I G C++    +       +    F      +N LI G  +   +  A+ L
Sbjct: 583 PTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGL 642

Query: 461 FHKLP--QKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGF 518
             K+   Q GLVP V TY+ ++HG CR+ ++++A   L  M + G  P+  T+  +++GF
Sbjct: 643 VKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGF 702

Query: 519 LQNNKTSKVVELLHKMAEPERNLVPDD 545
           +  +  ++   +  +M   +R   PDD
Sbjct: 703 VSQDNLTEAFRIHDEML--QRGFSPDD 727



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 117/449 (26%), Positives = 206/449 (45%), Gaps = 48/449 (10%)

Query: 153 ITYGTLINGFCRTGNLSVA----LRLHKKMVSGDYE--NGLISK-----TNIFSYSIIID 201
           ++   +I+   R+G LS A    LR+ ++      E  N L S      +N   + ++I 
Sbjct: 114 LSLSAMIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCGSNDSVFDLLIR 173

Query: 202 SLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRP 261
           +  +   + +A E F  ++ +G   ++  C  LI      G  E   G++ E+   G   
Sbjct: 174 TYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGI 233

Query: 262 NLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIF 321
           N+ T N+M++ LCK GK+ +    L  + ++G+ PD  TYN+L+  Y   G ++ A E+ 
Sbjct: 234 NVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELM 293

Query: 322 LSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQA 381
            +M  KG    V +YN +ING CK    E A  ++ +++ +G+     TY +LL    + 
Sbjct: 294 NAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKK 353

Query: 382 GQAGYAQKLFDEMKLYNVEPDLS-----------------------------------TY 406
           G     +K+F +M+  +V PDL                                     Y
Sbjct: 354 GDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIY 413

Query: 407 NILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQ 466
            ILI G C+   +  A+ L + +        +  +N ++ GLCK   L  A +LF+++ +
Sbjct: 414 TILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTE 473

Query: 467 KGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSK 526
           + L P   T +I+I G C+ G L+ A +    M++     +VVT+NTL+ GF +      
Sbjct: 474 RALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDT 533

Query: 527 VVELLHKMAEPERNLVPDDTTFSIVVDLL 555
             E+   M   E  ++P   ++SI+V+ L
Sbjct: 534 AKEIWADMVSKE--ILPTPISYSILVNAL 560



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 106/381 (27%), Positives = 181/381 (47%), Gaps = 19/381 (4%)

Query: 190 KTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGR-GINPAVVV---------CTT------ 233
           K    S S +I  L + G +  A+   L M  R G++   +V         C +      
Sbjct: 110 KHTSLSLSAMIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCGSNDSVFD 169

Query: 234 -LIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQR 292
            LI  +  A    E +  F  +   G   ++   N +I  L + G +  A G+ + + + 
Sbjct: 170 LLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRS 229

Query: 293 GLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEA 352
           G+  + +T N +++  C  G+++        +  KG    +V+YN LI+ Y     +EEA
Sbjct: 230 GVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEA 289

Query: 353 MSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDG 412
             L   +   G    V TYNT+++GL + G+   A+++F EM    + PD +TY  L+  
Sbjct: 290 FELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLME 349

Query: 413 LCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPT 472
            CK   V E  K+F  +        +  F+ ++    ++G LD A   F+ + + GL+P 
Sbjct: 350 ACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPD 409

Query: 473 VVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLH 532
            V Y+I+I G CRKG +  A +    M + GCA +VVT+NT++HG  +     +  +L +
Sbjct: 410 NVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFN 469

Query: 533 KMAEPERNLVPDDTTFSIVVD 553
           +M   ER L PD  T +I++D
Sbjct: 470 EMT--ERALFPDSYTLTILID 488


>gi|302757529|ref|XP_002962188.1| hypothetical protein SELMODRAFT_60915 [Selaginella moellendorffii]
 gi|300170847|gb|EFJ37448.1| hypothetical protein SELMODRAFT_60915 [Selaginella moellendorffii]
          Length = 535

 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 138/503 (27%), Positives = 256/503 (50%), Gaps = 18/503 (3%)

Query: 63  FGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCF-G 121
            G+       P +SSFN+L    A    ++ V +  R++ + G+  +  T  ++++    
Sbjct: 17  LGFFQSSISEPNVSSFNILLRGFAARDDFEVVNALLREMKARGITSNGATHGVILSALCA 76

Query: 122 NKERGLCVE---NRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKM 178
            ++    V    +R +EA  LF+ + A    PD +TY  +++G  + GN    L  ++KM
Sbjct: 77  RRDLDKAVSYFNSRTEEACRLFEAIEA----PDSVTYTAIVDGLFKAGNYDAGLEYYEKM 132

Query: 179 VSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGF 238
           V+   E  L+      +Y++++D LCK   V++A ++F EM  +G  P ++  ++LI G 
Sbjct: 133 VASKCEPTLL------TYTVLVDGLCKAHKVERACDVFEEMIRKGHKPDIIAYSSLIDGL 186

Query: 239 CCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDR 298
             AG  +E   L   M+  GP P  + +  ++  LCK G+I EA   ++ M +R L P  
Sbjct: 187 SKAGRVDEARKLVDLMIARGPPPTAVAYTSIVAGLCKCGRIQEAVKTIQEMRRRRLRPRV 246

Query: 299 FTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQ 358
            TY+ ++ GY  +G+++ A  +   M  + C    +SY + I     I   EEA  ++  
Sbjct: 247 DTYSFIVTGYIGMGKVEEAFAVMEEMADRDCAPDTISYTMFIEALYSIGRREEAEKVFET 306

Query: 359 IISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNC 418
           ++  G +  + TY  ++    + G    A  +   M    V+P+   Y +++DG  K++ 
Sbjct: 307 MVEKGCKPDMHTYGIIIDNFCKEGSMAAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSR 366

Query: 419 VQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKG--LVPTVVTY 476
           ++EA++L+  +  +        +N +I+ LCK  ++D A EL  ++ ++   L P++VTY
Sbjct: 367 LEEALELYQRILKDGILPSTVTYNTVINALCKLKKMDEALELLREMQRRKEELEPSIVTY 426

Query: 477 SIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAE 536
           S++IHGL + G  E+A D L  M  NG  P+  T+ +L+       K S+ +ELL +M +
Sbjct: 427 SMIIHGLGKVGMEERAFDLLAEMIDNGVIPDCFTYTSLIQTLAGAGKVSRAMELLEEMLK 486

Query: 537 PERNLVPDDTTFSIVVDLLAKDE 559
               + PDD T+  +V +L + +
Sbjct: 487 A--GIFPDDHTYGTLVQILCRSD 507



 Score =  215 bits (547), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 126/481 (26%), Positives = 239/481 (49%), Gaps = 15/481 (3%)

Query: 79  NLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATW 138
           N L  A+ +       + F++  +S    P+  + NIL+       RG    +  +    
Sbjct: 1   NSLLLALVRGGQLSDALGFFQSSIS---EPNVSSFNILL-------RGFAARDDFEVVNA 50

Query: 139 LFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALR-LHKKMVSGDYENGLISKTNIFSYS 197
           L + M A G+  +  T+G +++  C   +L  A+   + +          I   +  +Y+
Sbjct: 51  LLREMKARGITSNGATHGVILSALCARRDLDKAVSYFNSRTEEACRLFEAIEAPDSVTYT 110

Query: 198 IIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDL 257
            I+D L K G  D   E + +M      P ++  T L+ G C A   E    +F EM+  
Sbjct: 111 AIVDGLFKAGNYDAGLEYYEKMVASKCEPTLLTYTVLVDGLCKAHKVERACDVFEEMIRK 170

Query: 258 GPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTA 317
           G +P+++ ++ +ID L K G+++EA  L++LMI RG  P    Y S++ G C  GRI  A
Sbjct: 171 GHKPDIIAYSSLIDGLSKAGRVDEARKLVDLMIARGPPPTAVAYTSIVAGLCKCGRIQEA 230

Query: 318 REIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSG 377
            +    M  +  +  V +Y+ ++ GY  +  VEEA ++  ++         I+Y   +  
Sbjct: 231 VKTIQEMRRRRLRPRVDTYSFIVTGYIGMGKVEEAFAVMEEMADRDCAPDTISYTMFIEA 290

Query: 378 LFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFG 437
           L+  G+   A+K+F+ M     +PD+ TY I+ID  CK   +  A  +  +++    +  
Sbjct: 291 LYSIGRREEAEKVFETMVEKGCKPDMHTYGIIIDNFCKEGSMAAATHVLRLMDKAAVKPN 350

Query: 438 IEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLL 497
             I+  ++DG  K+ RL+ A EL+ ++ + G++P+ VTY+ +I+ LC+  K+++A + L 
Sbjct: 351 RYIYTMIMDGFVKSSRLEEALELYQRILKDGILPSTVTYNTVINALCKLKKMDEALELLR 410

Query: 498 YME--KNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLL 555
            M+  K    P++VT++ ++HG  +     +  +LL +M   +  ++PD  T++ ++  L
Sbjct: 411 EMQRRKEELEPSIVTYSMIIHGLGKVGMEERAFDLLAEMI--DNGVIPDCFTYTSLIQTL 468

Query: 556 A 556
           A
Sbjct: 469 A 469



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 124/445 (27%), Positives = 222/445 (49%), Gaps = 16/445 (3%)

Query: 72  SPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVEN 131
           +P   ++  +   + K  +YDA + +Y K+V+    P  LT  +L++       GLC  +
Sbjct: 103 APDSVTYTAIVDGLFKAGNYDAGLEYYEKMVASKCEPTLLTYTVLVD-------GLCKAH 155

Query: 132 RIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKT 191
           +++ A  +F+ MI  G +PD+I Y +LI+G  + G +  A +L   M++           
Sbjct: 156 KVERACDVFEEMIRKGHKPDIIAYSSLIDGLSKAGRVDEARKLVDLMIARG------PPP 209

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
              +Y+ I+  LCK G + +A +   EM+ R + P V   + ++ G+   G  EE   + 
Sbjct: 210 TAVAYTSIVAGLCKCGRIQEAVKTIQEMRRRRLRPRVDTYSFIVTGYIGMGKVEEAFAVM 269

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
            EM D    P+ +++ + I+ L   G+  EA  + E M+++G  PD  TY  ++D +C  
Sbjct: 270 EEMADRDCAPDTISYTMFIEALYSIGRREEAEKVFETMVEKGCKPDMHTYGIIIDNFCKE 329

Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
           G +  A  +   M     K     Y ++++G+ K   +EEA+ LY++I+ +G+  + +TY
Sbjct: 330 GSMAAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALELYQRILKDGILPSTVTY 389

Query: 372 NTLLSGLFQAGQAGYAQKLFDEM--KLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHML 429
           NT+++ L +  +   A +L  EM  +   +EP + TY+++I GL K    + A  L   +
Sbjct: 390 NTVINALCKLKKMDEALELLREMQRRKEELEPSIVTYSMIIHGLGKVGMEERAFDLLAEM 449

Query: 430 EMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKL 489
             N        +  LI  L  AG++  A EL  ++ + G+ P   TY  ++  LCR   +
Sbjct: 450 IDNGVIPDCFTYTSLIQTLAGAGKVSRAMELLEEMLKAGIFPDDHTYGTLVQILCR-SDV 508

Query: 490 EKANDFLLYMEKNGCAPNVVTFNTL 514
           + A D L  M +NG  PN  TF  +
Sbjct: 509 DAAWDLLQEMMRNGHTPNEFTFKAV 533



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 80/287 (27%), Positives = 138/287 (48%), Gaps = 21/287 (7%)

Query: 51  SGIINLNEARYFFGYMTHMQP---SPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLL 107
           +G I + +    F  M  M     +P   S+ +   A+      +     +  +V  G  
Sbjct: 254 TGYIGMGKVEEAFAVMEEMADRDCAPDTISYTMFIEALYSIGRREEAEKVFETMVEKGCK 313

Query: 108 PDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGN 167
           PD  T  I+I+ F       C E  +  AT + + M    V+P+   Y  +++GF ++  
Sbjct: 314 PDMHTYGIIIDNF-------CKEGSMAAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSR 366

Query: 168 LSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRG--IN 225
           L  AL L+++++    ++G++  T   +Y+ +I++LCK   +D+A EL  EM+ R   + 
Sbjct: 367 LEEALELYQRIL----KDGILPST--VTYNTVINALCKLKKMDEALELLREMQRRKEELE 420

Query: 226 PAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGL 285
           P++V  + +IHG    G  E    L  EM+D G  P+  T+  +I  L   GK++ A  L
Sbjct: 421 PSIVTYSMIIHGLGKVGMEERAFDLLAEMIDNGVIPDCFTYTSLIQTLAGAGKVSRAMEL 480

Query: 286 LELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHT 332
           LE M++ G+ PD  TY +L+   C    +D A ++   M   G  HT
Sbjct: 481 LEEMLKAGIFPDDHTYGTLVQILCR-SDVDAAWDLLQEMMRNG--HT 524


>gi|334182313|ref|NP_172058.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
 gi|334182315|ref|NP_001154307.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
 gi|122236365|sp|Q0WVK7.1|PPR12_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g05670, mitochondrial; Flags: Precursor
 gi|110741796|dbj|BAE98841.1| hypothetical protein [Arabidopsis thaliana]
 gi|332189752|gb|AEE27873.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
 gi|332189753|gb|AEE27874.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
          Length = 741

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 153/535 (28%), Positives = 250/535 (46%), Gaps = 39/535 (7%)

Query: 56  LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDA-VISFYRKLVSIGLLPDFLTLN 114
           L EAR  F  M +      + S N+    ++K+ +  A  I  +R+   +G+  +  + N
Sbjct: 191 LREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYN 250

Query: 115 ILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRL 174
           I+I+        +C   RIKEA  L   M   G  PDVI+Y T++NG+CR G L    +L
Sbjct: 251 IVIHF-------VCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKL 303

Query: 175 -----HKKMVSGDYENG-----------LISKTNIFS-------------YSIIIDSLCK 205
                 K +    Y  G           L      FS             Y+ +ID  CK
Sbjct: 304 IEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCK 363

Query: 206 EGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLT 265
            G +  A + F EM  R I P V+  T +I GFC  G+  E   LF EM   G  P+ +T
Sbjct: 364 RGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVT 423

Query: 266 FNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMH 325
           F  +I+  CK G + +A  +   MIQ G +P+  TY +L+DG C  G +D+A E+   M 
Sbjct: 424 FTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMW 483

Query: 326 SKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAG 385
             G +  + +YN ++NG CK  N+EEA+ L  +  + G+    +TY TL+    ++G+  
Sbjct: 484 KIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMD 543

Query: 386 YAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLI 445
            AQ++  EM    ++P + T+N+L++G C +  +++  KL + +           FN L+
Sbjct: 544 KAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLV 603

Query: 446 DGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCA 505
              C    L  A  ++  +  +G+ P   TY  ++ G C+   +++A      M+  G +
Sbjct: 604 KQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFS 663

Query: 506 PNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEK 560
            +V T++ L+ GFL+  K  +  E+  +M      L  D   F    D   K ++
Sbjct: 664 VSVSTYSVLIKGFLKRKKFLEAREVFDQMR--REGLAADKEIFDFFSDTKYKGKR 716



 Score =  224 bits (571), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 136/495 (27%), Positives = 244/495 (49%), Gaps = 15/495 (3%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
           N  +H  C+ G   + EA +    M     +P + S++ +     +    D V      +
Sbjct: 250 NIVIHFVCQLG--RIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVM 307

Query: 102 VSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLING 161
              GL P+      +I         LC   ++ EA   F  MI  G+ PD + Y TLI+G
Sbjct: 308 KRKGLKPNSYIYGSIIGL-------LCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDG 360

Query: 162 FCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKG 221
           FC+ G++  A +   +M S D         ++ +Y+ II   C+ G + +A +LF EM  
Sbjct: 361 FCKRGDIRAASKFFYEMHSRDI------TPDVLTYTAIISGFCQIGDMVEAGKLFHEMFC 414

Query: 222 RGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINE 281
           +G+ P  V  T LI+G+C AG+ ++   +   M+  G  PN++T+  +ID LCK G ++ 
Sbjct: 415 KGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDS 474

Query: 282 ANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILIN 341
           AN LL  M + GL P+ FTYNS+++G C  G I+ A ++     + G     V+Y  L++
Sbjct: 475 ANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMD 534

Query: 342 GYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEP 401
            YCK   +++A  + ++++  G++ T++T+N L++G    G     +KL + M    + P
Sbjct: 535 AYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAP 594

Query: 402 DLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELF 461
           + +T+N L+   C  N ++ A  ++  +         + +  L+ G CKA  +  AW LF
Sbjct: 595 NATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLF 654

Query: 462 HKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQN 521
            ++  KG   +V TYS++I G  ++ K  +A +    M + G A +   F+       + 
Sbjct: 655 QEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKG 714

Query: 522 NKTSKVVELLHKMAE 536
            +   +V+ + ++ E
Sbjct: 715 KRPDTIVDPIDEIIE 729



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 82/336 (24%), Positives = 147/336 (43%), Gaps = 55/336 (16%)

Query: 230 VCTTLIHGFCCAGNWEE----VNGLFIEMLDL--------GPRPNLLTFNVMIDCLCKGG 277
           V  +LI  F     WE     V   F++  DL        G  P +  F+V    L   G
Sbjct: 137 VAQSLISSF-----WERPKLNVTDSFVQFFDLLVYTYKDWGSDPRV--FDVFFQVLVDFG 189

Query: 278 KINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYN 337
            + EA  + E M+  GL                V  +D+   ++L+  SK C  T     
Sbjct: 190 LLREARRVFEKMLNYGL----------------VLSVDSC-NVYLTRLSKDCYKTAT--- 229

Query: 338 ILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLY 397
                         A+ ++R+    GV   V +YN ++  + Q G+   A  L   M+L 
Sbjct: 230 --------------AIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELK 275

Query: 398 NVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNA 457
              PD+ +Y+ +++G C+   + +  KL  +++    +    I+  +I  LC+  +L  A
Sbjct: 276 GYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEA 335

Query: 458 WELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHG 517
            E F ++ ++G++P  V Y+ +I G C++G +  A+ F   M      P+V+T+  ++ G
Sbjct: 336 EEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISG 395

Query: 518 FLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
           F Q     +  +L H+M    + L PD  TF+ +++
Sbjct: 396 FCQIGDMVEAGKLFHEMF--CKGLEPDSVTFTELIN 429


>gi|4836917|gb|AAD30619.1|AC007153_11 similar to indole-3-acetate beta-glucosyltransferase [Arabidopsis
            thaliana]
          Length = 1184

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 153/535 (28%), Positives = 250/535 (46%), Gaps = 39/535 (7%)

Query: 56   LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDA-VISFYRKLVSIGLLPDFLTLN 114
            L EAR  F  M +      + S N+    ++K+ +  A  I  +R+   +G+  +  + N
Sbjct: 634  LREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYN 693

Query: 115  ILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRL 174
            I+I+        +C   RIKEA  L   M   G  PDVI+Y T++NG+CR G L    +L
Sbjct: 694  IVIHF-------VCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKL 746

Query: 175  -----HKKMVSGDYENG-----------LISKTNIFS-------------YSIIIDSLCK 205
                  K +    Y  G           L      FS             Y+ +ID  CK
Sbjct: 747  IEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCK 806

Query: 206  EGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLT 265
             G +  A + F EM  R I P V+  T +I GFC  G+  E   LF EM   G  P+ +T
Sbjct: 807  RGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVT 866

Query: 266  FNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMH 325
            F  +I+  CK G + +A  +   MIQ G +P+  TY +L+DG C  G +D+A E+   M 
Sbjct: 867  FTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMW 926

Query: 326  SKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAG 385
              G +  + +YN ++NG CK  N+EEA+ L  +  + G+    +TY TL+    ++G+  
Sbjct: 927  KIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMD 986

Query: 386  YAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLI 445
             AQ++  EM    ++P + T+N+L++G C +  +++  KL + +           FN L+
Sbjct: 987  KAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLV 1046

Query: 446  DGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCA 505
               C    L  A  ++  +  +G+ P   TY  ++ G C+   +++A      M+  G +
Sbjct: 1047 KQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFS 1106

Query: 506  PNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEK 560
             +V T++ L+ GFL+  K  +  E+  +M      L  D   F    D   K ++
Sbjct: 1107 VSVSTYSVLIKGFLKRKKFLEAREVFDQMR--REGLAADKEIFDFFSDTKYKGKR 1159



 Score =  225 bits (574), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 136/495 (27%), Positives = 244/495 (49%), Gaps = 15/495 (3%)

Query: 42   NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
            N  +H  C+ G   + EA +    M     +P + S++ +     +    D V      +
Sbjct: 693  NIVIHFVCQLG--RIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVM 750

Query: 102  VSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLING 161
               GL P+      +I         LC   ++ EA   F  MI  G+ PD + Y TLI+G
Sbjct: 751  KRKGLKPNSYIYGSIIGL-------LCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDG 803

Query: 162  FCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKG 221
            FC+ G++  A +   +M S D         ++ +Y+ II   C+ G + +A +LF EM  
Sbjct: 804  FCKRGDIRAASKFFYEMHSRDI------TPDVLTYTAIISGFCQIGDMVEAGKLFHEMFC 857

Query: 222  RGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINE 281
            +G+ P  V  T LI+G+C AG+ ++   +   M+  G  PN++T+  +ID LCK G ++ 
Sbjct: 858  KGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDS 917

Query: 282  ANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILIN 341
            AN LL  M + GL P+ FTYNS+++G C  G I+ A ++     + G     V+Y  L++
Sbjct: 918  ANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMD 977

Query: 342  GYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEP 401
             YCK   +++A  + ++++  G++ T++T+N L++G    G     +KL + M    + P
Sbjct: 978  AYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAP 1037

Query: 402  DLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELF 461
            + +T+N L+   C  N ++ A  ++  +         + +  L+ G CKA  +  AW LF
Sbjct: 1038 NATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLF 1097

Query: 462  HKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQN 521
             ++  KG   +V TYS++I G  ++ K  +A +    M + G A +   F+       + 
Sbjct: 1098 QEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKG 1157

Query: 522  NKTSKVVELLHKMAE 536
             +   +V+ + ++ E
Sbjct: 1158 KRPDTIVDPIDEIIE 1172



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 82/336 (24%), Positives = 147/336 (43%), Gaps = 55/336 (16%)

Query: 230 VCTTLIHGFCCAGNWEE----VNGLFIEMLDL--------GPRPNLLTFNVMIDCLCKGG 277
           V  +LI  F     WE     V   F++  DL        G  P +  F+V    L   G
Sbjct: 580 VAQSLISSF-----WERPKLNVTDSFVQFFDLLVYTYKDWGSDPRV--FDVFFQVLVDFG 632

Query: 278 KINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYN 337
            + EA  + E M+                 Y LV  +D+   ++L+  SK C  T     
Sbjct: 633 LLREARRVFEKMLN----------------YGLVLSVDSC-NVYLTRLSKDCYKTAT--- 672

Query: 338 ILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLY 397
                         A+ ++R+    GV   V +YN ++  + Q G+   A  L   M+L 
Sbjct: 673 --------------AIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELK 718

Query: 398 NVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNA 457
              PD+ +Y+ +++G C+   + +  KL  +++    +    I+  +I  LC+  +L  A
Sbjct: 719 GYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEA 778

Query: 458 WELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHG 517
            E F ++ ++G++P  V Y+ +I G C++G +  A+ F   M      P+V+T+  ++ G
Sbjct: 779 EEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISG 838

Query: 518 FLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
           F Q     +  +L H+M    + L PD  TF+ +++
Sbjct: 839 FCQIGDMVEAGKLFHEMF--CKGLEPDSVTFTELIN 872


>gi|224123734|ref|XP_002330195.1| predicted protein [Populus trichocarpa]
 gi|222871651|gb|EEF08782.1| predicted protein [Populus trichocarpa]
          Length = 529

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 136/403 (33%), Positives = 215/403 (53%), Gaps = 19/403 (4%)

Query: 126 GLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKM-VSGDYE 184
           GL  E+   +  ++++ MI   +  +VI++  ++NG C+ G L+ A  + + M V G   
Sbjct: 129 GLVKESENGDMEFVYREMIKRKIELNVISFNIVVNGLCKVGKLNRAGDVIEDMKVWG--- 185

Query: 185 NGLISKTNIFSYSIIIDSLCKEGLVDK---AKELFLEMKGRGINPAVVVCTTLIHGFCCA 241
                  N+ +Y+ +ID  CK G + K   A  +  EM  +GI P  V    LI GFC  
Sbjct: 186 ----VSPNVITYNTLIDGYCKMGRIGKMYKADAILKEMVAKGICPNEVTYNILIDGFCKD 241

Query: 242 GNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTY 301
            N      +F EM   G RPN++T+N++I+ LC  GK++EA  L + M+   L P+  T+
Sbjct: 242 ENVSGAMRVFGEMQRQGLRPNVVTYNILINGLCSDGKVDEAVALRDQMVSSDLEPNVVTH 301

Query: 302 NSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIIS 361
           N L++G+C    ++ A  +F  M  +G     ++Y  LI+ YCK   +E+A +LY  +I 
Sbjct: 302 NVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMID 361

Query: 362 NGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQE 421
            G+   V TYN L++GL + G    A+ L +EM    +  D+ TYNILID LCK    ++
Sbjct: 362 RGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLSADVVTYNILIDSLCKKGESRK 421

Query: 422 AVKLFHMLEMNKFEFGIE----IFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYS 477
           AVKL   +    FE G+      +N L+DG C+ G L  A  +  ++ +KG    VVT++
Sbjct: 422 AVKLLDEM----FEKGLNPSHVTYNTLMDGYCREGNLRAALIVRTRMERKGKQANVVTHN 477

Query: 478 IMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQ 520
           ++I G C KG+LE AN  L  M + G  PN  T+  +    ++
Sbjct: 478 VLIKGFCLKGRLEDANGLLNEMLERGLVPNRTTYEIIKEEMME 520



 Score =  225 bits (573), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 140/416 (33%), Positives = 227/416 (54%), Gaps = 17/416 (4%)

Query: 75  ISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIK 134
           IS   LL G V ++ + D     YR+++   +  + ++ NI++N       GLC   ++ 
Sbjct: 121 ISCNPLLSGLVKESENGDMEF-VYREMIKRKIELNVISFNIVVN-------GLCKVGKLN 172

Query: 135 EATWLFKNMIAFGVRPDVITYGTLINGFC---RTGNLSVALRLHKKMVSGDYENGLISKT 191
            A  + ++M  +GV P+VITY TLI+G+C   R G +  A  + K+MV+     G+    
Sbjct: 173 RAGDVIEDMKVWGVSPNVITYNTLIDGYCKMGRIGKMYKADAILKEMVA----KGICP-- 226

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
           N  +Y+I+ID  CK+  V  A  +F EM+ +G+ P VV    LI+G C  G  +E   L 
Sbjct: 227 NEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLRPNVVTYNILINGLCSDGKVDEAVALR 286

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
            +M+     PN++T NV+I+  CK   +NEA  L   M ++G++P+  TY +L+D YC  
Sbjct: 287 DQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCKD 346

Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
           GR++ A  ++  M  +G    V +YN LI G C+  +V+ A SL  +++S  +   V+TY
Sbjct: 347 GRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLSADVVTY 406

Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
           N L+  L + G++  A KL DEM    + P   TYN L+DG C+   ++ A+ +   +E 
Sbjct: 407 NILIDSLCKKGESRKAVKLLDEMFEKGLNPSHVTYNTLMDGYCREGNLRAALIVRTRMER 466

Query: 432 NKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKG 487
              +  +   N LI G C  GRL++A  L +++ ++GLVP   TY I+   +  KG
Sbjct: 467 KGKQANVVTHNVLIKGFCLKGRLEDANGLLNEMLERGLVPNRTTYEIIKEEMMEKG 522



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 136/415 (32%), Positives = 224/415 (53%), Gaps = 11/415 (2%)

Query: 140 FKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSII 199
           FK    +G +  +I+   L++G  +         ++++M+    E       N+ S++I+
Sbjct: 108 FKRAGDYGFKLSLISCNPLLSGLVKESENGDMEFVYREMIKRKIE------LNVISFNIV 161

Query: 200 IDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAG---NWEEVNGLFIEMLD 256
           ++ LCK G +++A ++  +MK  G++P V+   TLI G+C  G      + + +  EM+ 
Sbjct: 162 VNGLCKVGKLNRAGDVIEDMKVWGVSPNVITYNTLIDGYCKMGRIGKMYKADAILKEMVA 221

Query: 257 LGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDT 316
            G  PN +T+N++ID  CK   ++ A  +   M ++GL P+  TYN L++G C  G++D 
Sbjct: 222 KGICPNEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLRPNVVTYNILINGLCSDGKVDE 281

Query: 317 AREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLS 376
           A  +   M S   +  VV++N+LING+CK   V EA++L+  +   GV    +TY TL+ 
Sbjct: 282 AVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLID 341

Query: 377 GLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEF 436
              + G+   A  L++ M    + P++STYN LI GLC+   V+ A  L + +   K   
Sbjct: 342 AYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLSA 401

Query: 437 GIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFL 496
            +  +N LID LCK G    A +L  ++ +KGL P+ VTY+ ++ G CR+G L  A    
Sbjct: 402 DVVTYNILIDSLCKKGESRKAVKLLDEMFEKGLNPSHVTYNTLMDGYCREGNLRAALIVR 461

Query: 497 LYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIV 551
             ME+ G   NVVT N L+ GF    +      LL++M   ER LVP+ TT+ I+
Sbjct: 462 TRMERKGKQANVVTHNVLIKGFCLKGRLEDANGLLNEML--ERGLVPNRTTYEII 514



 Score =  218 bits (555), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 119/343 (34%), Positives = 198/343 (57%), Gaps = 5/343 (1%)

Query: 214 ELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCL 273
           E F      G   +++ C  L+ G        ++  ++ EM+      N+++FN++++ L
Sbjct: 106 EAFKRAGDYGFKLSLISCNPLLSGLVKESENGDMEFVYREMIKRKIELNVISFNIVVNGL 165

Query: 274 CKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRID---TAREIFLSMHSKGCK 330
           CK GK+N A  ++E M   G++P+  TYN+L+DGYC +GRI     A  I   M +KG  
Sbjct: 166 CKVGKLNRAGDVIEDMKVWGVSPNVITYNTLIDGYCKMGRIGKMYKADAILKEMVAKGIC 225

Query: 331 HTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKL 390
              V+YNILI+G+CK  NV  AM ++ ++   G+R  V+TYN L++GL   G+   A  L
Sbjct: 226 PNEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLRPNVVTYNILINGLCSDGKVDEAVAL 285

Query: 391 FDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCK 450
            D+M   ++EP++ T+N+LI+G CKN  V EA+ LF+ +E    +     +  LID  CK
Sbjct: 286 RDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCK 345

Query: 451 AGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVT 510
            GR+++A+ L++ +  +G+ P V TY+ +I GLCRKG ++ A   +  M     + +VVT
Sbjct: 346 DGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLSADVVT 405

Query: 511 FNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
           +N L+    +  ++ K V+LL +M   E+ L P   T++ ++D
Sbjct: 406 YNILIDSLCKKGESRKAVKLLDEMF--EKGLNPSHVTYNTLMD 446



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 116/367 (31%), Positives = 190/367 (51%), Gaps = 24/367 (6%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLL------FGAVAKNRHYDAVISFYRKLV 102
           CK G   LN A      M     SP + ++N L       G + K    DA++   +++V
Sbjct: 166 CKVG--KLNRAGDVIEDMKVWGVSPNVITYNTLIDGYCKMGRIGKMYKADAIL---KEMV 220

Query: 103 SIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGF 162
           + G+ P+ +T NILI+       G C +  +  A  +F  M   G+RP+V+TY  LING 
Sbjct: 221 AKGICPNEVTYNILID-------GFCKDENVSGAMRVFGEMQRQGLRPNVVTYNILINGL 273

Query: 163 CRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGR 222
           C  G +  A+ L  +MVS D E       N+ +++++I+  CK   V++A  LF +M+ +
Sbjct: 274 CSDGKVDEAVALRDQMVSSDLE------PNVVTHNVLINGFCKNKTVNEAINLFNDMEKQ 327

Query: 223 GINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEA 282
           G++P  +  TTLI  +C  G  E+   L+  M+D G  P + T+N +I  LC+ G +  A
Sbjct: 328 GVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAA 387

Query: 283 NGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILING 342
             L+  M+ + L+ D  TYN L+D  C  G    A ++   M  KG   + V+YN L++G
Sbjct: 388 RSLMNEMVSKKLSADVVTYNILIDSLCKKGESRKAVKLLDEMFEKGLNPSHVTYNTLMDG 447

Query: 343 YCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPD 402
           YC+  N+  A+ +  ++   G +  V+T+N L+ G    G+   A  L +EM    + P+
Sbjct: 448 YCREGNLRAALIVRTRMERKGKQANVVTHNVLIKGFCLKGRLEDANGLLNEMLERGLVPN 507

Query: 403 LSTYNIL 409
            +TY I+
Sbjct: 508 RTTYEII 514



 Score =  112 bits (280), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 81/294 (27%), Positives = 129/294 (43%), Gaps = 71/294 (24%)

Query: 55  NLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLN 114
           N++ A   FG M      P + ++N+L   +  +   D  ++   ++VS  L P+ +T N
Sbjct: 243 NVSGAMRVFGEMQRQGLRPNVVTYNILINGLCSDGKVDEAVALRDQMVSSDLEPNVVTHN 302

Query: 115 ILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRL 174
           +LIN       G C    + EA  LF +M   GV P+ +TY TLI+ +C+ G +  A  L
Sbjct: 303 VLIN-------GFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFAL 355

Query: 175 HKKMVS--------------------GDYE------NGLISK---TNIFSYSIIIDSLCK 205
           +  M+                     GD +      N ++SK    ++ +Y+I+IDSLCK
Sbjct: 356 YNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLSADVVTYNILIDSLCK 415

Query: 206 EGLVDKAKELFLEMKGRGINPA-----------------------------------VVV 230
           +G   KA +L  EM  +G+NP+                                   VV 
Sbjct: 416 KGESRKAVKLLDEMFEKGLNPSHVTYNTLMDGYCREGNLRAALIVRTRMERKGKQANVVT 475

Query: 231 CTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANG 284
              LI GFC  G  E+ NGL  EML+ G  PN  T+ ++ + + + G + +  G
Sbjct: 476 HNVLIKGFCLKGRLEDANGLLNEMLERGLVPNRTTYEIIKEEMMEKGFVPDIEG 529



 Score =  105 bits (263), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 66/268 (24%), Positives = 139/268 (51%), Gaps = 9/268 (3%)

Query: 303 SLMDGYCLVGRIDTAREIFLSMHSKG---CKHTVVSYNILINGYCKILNVEEAMSLYRQI 359
           S +D +    +  +   IF ++   G   C +++++ ++L+  + + L +      +++ 
Sbjct: 53  SFLDKFVKYEKDYSVSAIFHAISMSGDSFCVNSILA-DMLVLAFVRNLKILRGFEAFKRA 111

Query: 360 ISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCV 419
              G + ++I+ N LLSGL +  + G  + ++ EM    +E ++ ++NI+++GLCK   +
Sbjct: 112 GDYGFKLSLISCNPLLSGLVKESENGDMEFVYREMIKRKIELNVISFNIVVNGLCKVGKL 171

Query: 420 QEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWE---LFHKLPQKGLVPTVVTY 476
             A  +   +++      +  +N LIDG CK GR+   ++   +  ++  KG+ P  VTY
Sbjct: 172 NRAGDVIEDMKVWGVSPNVITYNTLIDGYCKMGRIGKMYKADAILKEMVAKGICPNEVTY 231

Query: 477 SIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAE 536
           +I+I G C+   +  A      M++ G  PNVVT+N L++G   + K  + V L  +M  
Sbjct: 232 NILIDGFCKDENVSGAMRVFGEMQRQGLRPNVVTYNILINGLCSDGKVDEAVALRDQMVS 291

Query: 537 PERNLVPDDTTFSIVVDLLAKDEKYHEC 564
            +  L P+  T +++++   K++  +E 
Sbjct: 292 SD--LEPNVVTHNVLINGFCKNKTVNEA 317


>gi|218200911|gb|EEC83338.1| hypothetical protein OsI_28730 [Oryza sativa Indica Group]
 gi|258644730|dbj|BAI39975.1| putative fertility restorer homologue [Oryza sativa Indica Group]
          Length = 918

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 145/482 (30%), Positives = 241/482 (50%), Gaps = 17/482 (3%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
           P +  +N +  A+ K+ +     +  +K+    + PD  T   +I        G C ++ 
Sbjct: 213 PNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMI-------LGHCRKHD 265

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
           +  A  +F  M   G  P+ +TY TLING C +G ++ A  L ++M+     +G++   +
Sbjct: 266 LDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMIL----HGILPTAH 321

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
             +  II  +LC  G  + A  LF++MK +G  P V   T LI G C +G  +   GLF 
Sbjct: 322 TCTGPII--ALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGILKVAIGLFH 379

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
            M   G  PN +T+N +I+ L +  +I  A  +L LM + G +P+  TYN ++ GYC++G
Sbjct: 380 RMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILG 439

Query: 313 RIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYN 372
               A  +  +M  +G    +V+YN +I GYC   N   A+ +   +   G +    +Y 
Sbjct: 440 DPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYT 499

Query: 373 TLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMN 432
            L+ G  +  +   A  LF+EM    + P+  TY  LIDG CK+  +  A  L   ++ +
Sbjct: 500 ELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRS 559

Query: 433 KFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKA 492
                ++ +N LI GL K      A EL   + ++G+ P VVTY+ MI GLC+ G    A
Sbjct: 560 GCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLA 619

Query: 493 NDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERN-LVPDDTTFSIV 551
            +    M + GC PN++T+++L+    Q  K  +   L    AE ER+ L+PD+ T+  +
Sbjct: 620 LEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLF---AELERHGLIPDEITYVKM 676

Query: 552 VD 553
           ++
Sbjct: 677 IE 678



 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 133/453 (29%), Positives = 222/453 (49%), Gaps = 31/453 (6%)

Query: 140 FKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKT-------- 191
           +  M++ GV+P+++ Y  +IN  C+ GN++ A  + KK+   +      + T        
Sbjct: 203 YHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCR 262

Query: 192 ---------------------NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVV 230
                                N  +YS +I+ LC  G V++A +L  EM   GI P    
Sbjct: 263 KHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHT 322

Query: 231 CTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMI 290
           CT  I   C  G +E+   LF++M + G  PN+ T+  +I  LC  G +  A GL   M 
Sbjct: 323 CTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMS 382

Query: 291 QRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVE 350
           + G+ P+  TYN+L++      RI  A  +   M   GC   +V+YN +I GYC + + +
Sbjct: 383 RDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPK 442

Query: 351 EAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILI 410
           +AM +   ++  G    ++TYNT++ G   +G    A ++ D M+    +PD  +Y  LI
Sbjct: 443 KAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELI 502

Query: 411 DGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLV 470
            G CK + ++ A  LF+ +  +        +  LIDG CK  +LD A  L   + + G  
Sbjct: 503 CGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCR 562

Query: 471 PTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVEL 530
           P V TY+++IHGL ++     A +    M + G  PNVVT+  ++ G  +N  TS  +E+
Sbjct: 563 PNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEM 622

Query: 531 LHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
            +KM   E+  +P+  T+S ++  L ++ K  E
Sbjct: 623 FNKMI--EQGCLPNLLTYSSLIRALGQEGKVEE 653



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 146/536 (27%), Positives = 241/536 (44%), Gaps = 45/536 (8%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           C SGI+ +  A   F  M+     P   ++N L   + +NR           +   G  P
Sbjct: 366 CVSGILKV--AIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSP 423

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           + +T N +I       +G C+    K+A  +  NM+  G   +++TY T+I G+C +GN 
Sbjct: 424 NIVTYNEMI-------KGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNT 476

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
           + ALR+   M  G        K + +SY+ +I   CK   ++ A  LF EM   G+ P  
Sbjct: 477 TSALRILDLMRDGG------CKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNE 530

Query: 229 VVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLEL 288
           V  T LI G+C     +    L   M   G RPN+ T+NV+I  L K    + A  L ++
Sbjct: 531 VTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKV 590

Query: 289 MIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILN 348
           MI+ G+ P+  TY +++DG C  G    A E+F  M  +GC   +++Y+ LI    +   
Sbjct: 591 MIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGK 650

Query: 349 VEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNI 408
           VEEA +L+ ++  +G+    ITY  ++     +G+  +A      M     +P L TY +
Sbjct: 651 VEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGV 710

Query: 409 LIDGLCKN-----------------NCV-------QEAVKLFHMLEMNKFEFG--IEIFN 442
           LI GL KN                 NC        Q+AV +    ++ + + G  +++ N
Sbjct: 711 LIKGL-KNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSA-KLAELDPGLSVQVQN 768

Query: 443 CLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKN 502
            L+  L  AGR   A EL   +  +GL P    Y+ ++  L R   ++ A     +M   
Sbjct: 769 ALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQ 828

Query: 503 GCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKD 558
           GC  ++  +  L+    Q ++  +       M    R   PDD   ++++D L +D
Sbjct: 829 GCEVHLNGYKELICALCQLHRRKEARITFENML--MRTWNPDDVVQAVLIDGLLRD 882



 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 110/393 (27%), Positives = 193/393 (49%), Gaps = 34/393 (8%)

Query: 216 FLEMKGR-GINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLC 274
           FL+M  + G+   +   + L+      G    V   +  ML  G +PNLL +N +I+ LC
Sbjct: 167 FLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALC 226

Query: 275 KGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVV 334
           K G + +A  +++ + +  ++PD FTY S++ G+C    +D+A ++F  M  +GC+   V
Sbjct: 227 KDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTV 286

Query: 335 SYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEM 394
           +Y+ LING C    V EA  L R++I +G+  T  T    +  L   G    A +LF +M
Sbjct: 287 TYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDM 346

Query: 395 KLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRL 454
           K    EP++ TY  LI GLC +  ++ A+ LFH +  +        +N LI+ L +  R+
Sbjct: 347 KNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRI 406

Query: 455 DNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTL 514
             A+ + + + + G  P +VTY+ MI G C  G  +KA   +  M + G + N+VT+NT+
Sbjct: 407 KYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTI 466

Query: 515 MHGFLQNNKTSKVVELLHKMAE----PER-----------------------------NL 541
           + G+  +  T+  + +L  M +    P+                               L
Sbjct: 467 IKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGL 526

Query: 542 VPDDTTFSIVVDLLAKDEKYHECSAVSKSSYRA 574
            P++ T++ ++D   KDEK    +++ +   R+
Sbjct: 527 CPNEVTYTALIDGYCKDEKLDTATSLLEHMKRS 559



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 113/413 (27%), Positives = 186/413 (45%), Gaps = 30/413 (7%)

Query: 126 GLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYEN 185
           G C  ++++ A  LF  M+  G+ P+ +TY  LI+G+C+   L  A  L + M       
Sbjct: 504 GFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSG--- 560

Query: 186 GLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWE 245
               + N+ +Y+++I  L K+     A+EL   M   GI P VV  T +I G C  G+  
Sbjct: 561 ---CRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTS 617

Query: 246 EVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLM 305
               +F +M++ G  PNLLT++ +I  L + GK+ EA  L   + + GL PD  TY  ++
Sbjct: 618 LALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMI 677

Query: 306 DGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGY-CKILNVEEAMSLYRQIISN-- 362
           + Y + G+++ A      M   GC+ T+ +Y +LI G   + L  ++ ++    ++ N  
Sbjct: 678 EAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCS 737

Query: 363 -GVRQT--------------------VITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEP 401
            G + T                    V   N L+S L  AG+   A +L   M    + P
Sbjct: 738 FGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCP 797

Query: 402 DLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELF 461
           D   YN L+  L +   V  A+ +F  +     E  +  +  LI  LC+  R   A   F
Sbjct: 798 DQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITF 857

Query: 462 HKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTL 514
             +  +   P  V  +++I GL R G  +   +FL  ME     P+   +  L
Sbjct: 858 ENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETRRYMPSFHIYTIL 910



 Score =  139 bits (349), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 126/469 (26%), Positives = 193/469 (41%), Gaps = 39/469 (8%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
           N  +   C SG  N   A      M      P   S+  L     K    ++    + ++
Sbjct: 464 NTIIKGYCDSG--NTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEM 521

Query: 102 VSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLING 161
           V  GL P+ +T   LI+       G C + ++  AT L ++M   G RP+V TY  LI+G
Sbjct: 522 VDDGLCPNEVTYTALID-------GYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHG 574

Query: 162 FCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKG 221
             +  N S A  L K M+    E G+    N+ +Y+ +ID LCK G    A E+F +M  
Sbjct: 575 LTKQNNFSGAEELCKVMI----EEGIFP--NVVTYTAMIDGLCKNGSTSLALEMFNKMIE 628

Query: 222 RGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINE 281
           +G  P ++  ++LI      G  EE   LF E+   G  P+ +T+  MI+     GK+  
Sbjct: 629 QGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEH 688

Query: 282 ANGLLELMIQRGLNPDRFTYNSLMDGY--------------------CLVGRIDTAREIF 321
           A   L  MI+ G  P  +TY  L+ G                     C  G   T ++  
Sbjct: 689 AFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAV 748

Query: 322 LSMHSKGCKH----TVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSG 377
             M +K  +     +V   N L++         EA  L   +IS G+      YN+LL  
Sbjct: 749 SVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCS 808

Query: 378 LFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFG 437
           L +      A  +F  M     E  L+ Y  LI  LC+ +  +EA   F  + M  +   
Sbjct: 809 LLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPD 868

Query: 438 IEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRK 486
             +   LIDGL + G  D   E  H +  +  +P+   Y+I+     +K
Sbjct: 869 DVVQAVLIDGLLRDGYKDLCMEFLHIMETRRYMPSFHIYTILAREASKK 917



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 56/247 (22%), Positives = 110/247 (44%), Gaps = 37/247 (14%)

Query: 349 VEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNI 408
           +   MS    +  +G+R  +  Y+ LL  L + G        +  M    V+P+L  YN 
Sbjct: 161 MARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNA 220

Query: 409 LIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKG 468
           +I+ LCK+  V +A  +   +  ++       +  +I G C+   LD+A ++F+++ ++G
Sbjct: 221 VINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEG 280

Query: 469 LVPTVVTYSIMIHGLCRKGKLEKANDFL-------------------------------- 496
             P  VTYS +I+GLC  G++ +A D +                                
Sbjct: 281 CEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAW 340

Query: 497 ---LYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
              + M+  GC PNV T+  L+ G   +      + L H+M+     + P+  T++ +++
Sbjct: 341 RLFVDMKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSRD--GVFPNTVTYNALIN 398

Query: 554 LLAKDEK 560
           +L ++ +
Sbjct: 399 ILVENRR 405



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 27/155 (17%), Positives = 73/155 (47%), Gaps = 2/155 (1%)

Query: 409 LIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKG 468
           LI        +   +    ML  +    G+  ++ L+  L + G      + +H++  +G
Sbjct: 151 LIKSCHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEG 210

Query: 469 LVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVV 528
           + P ++ Y+ +I+ LC+ G +  A   +  + ++  +P+  T+ +++ G  + +     +
Sbjct: 211 VQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSAL 270

Query: 529 ELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
           ++ ++MA  +    P+  T+S +++ L    + +E
Sbjct: 271 QVFNQMA--KEGCEPNTVTYSTLINGLCDSGRVNE 303


>gi|414591629|tpg|DAA42200.1| TPA: hypothetical protein ZEAMMB73_531547 [Zea mays]
          Length = 462

 Score =  226 bits (576), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 141/449 (31%), Positives = 232/449 (51%), Gaps = 37/449 (8%)

Query: 108 PDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGN 167
           PD  +  I++N +  K  G  V+      T LF  M+  G+ PD+ T+  LI  +   G 
Sbjct: 27  PDVFSYTIMLNGYATK--GCLVD-----MTDLFDLMLGDGIAPDIYTFNVLIKAYANCGM 79

Query: 168 LSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPA 227
           L  A+ +  +M     ++G+  K ++ +Y  +I +LC+ G +D A E F +M  +G+ P 
Sbjct: 80  LDKAMIIFNEM----RDHGV--KPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPD 133

Query: 228 VVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLE 287
                 LI GFC  G+  +   L  E+++ G R +++ F  +I+ LCK G++ +A  + +
Sbjct: 134 KYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFD 193

Query: 288 LMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKIL 347
           L +  GL+PD   YN LMDGYCLVG+++ A  +F +M S G +  VV             
Sbjct: 194 LTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVG------------ 241

Query: 348 NVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYN 407
                     +++  G++ + I YN ++ GLF+AG+   A+  F EM    +  +  TY+
Sbjct: 242 ----------EMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYS 291

Query: 408 ILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQK 467
           I++ GL KN C  EA+ LF  L     +  I   N +I G+ +  R++ A +LF  + + 
Sbjct: 292 IVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRS 351

Query: 468 GLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKV 527
           GLVP  VTYSIMI  L ++G +E+A D    M+  GC P+    N ++   L+ N+  + 
Sbjct: 352 GLVPCAVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRA 411

Query: 528 VELLHKMAEPERNLVPDDTTFSIVVDLLA 556
              L K+   ERN   +  T  ++VDL +
Sbjct: 412 GAYLSKI--DERNFSLEHLTAMLLVDLFS 438



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 114/461 (24%), Positives = 210/461 (45%), Gaps = 28/461 (6%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CK G   + E R  F  M     +P + S+ ++    A       +   +  ++  G+ P
Sbjct: 5   CKYG--KIKEDRDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAP 62

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           D  T N+LI  + N     C    + +A  +F  M   GV+P V+TY T+I   CR G +
Sbjct: 63  DIYTFNVLIKAYAN-----C--GMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKM 115

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
             A+    +M+    + G++     ++Y  +I   C  G + KAKEL  E+   G+   +
Sbjct: 116 DDAMEKFNQMI----DQGVVPDK--YAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDI 169

Query: 229 VVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLEL 288
           V   ++I+  C  G   +   +F   +++G  P+ + +N+++D  C  GK+ +A  + + 
Sbjct: 170 VFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDA 229

Query: 289 MI-------------QRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVS 335
           M+             Q+G+ P    YN ++DG    GR   A+  F  M   G      +
Sbjct: 230 MVSAGIEPNVVGEMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCT 289

Query: 336 YNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMK 395
           Y+I++ G  K    +EA+ L++++ +  V+  +IT NT+++G+FQ  +   A+ LF  + 
Sbjct: 290 YSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASIS 349

Query: 396 LYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLD 455
              + P   TY+I+I  L K   V+EA  +F  ++    E    + N ++  L K   + 
Sbjct: 350 RSGLVPCAVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIV 409

Query: 456 NAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFL 496
            A     K+ ++      +T  +++     KG   +   FL
Sbjct: 410 RAGAYLSKIDERNFSLEHLTAMLLVDLFSSKGTCREQIRFL 450



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 107/388 (27%), Positives = 195/388 (50%), Gaps = 19/388 (4%)

Query: 202 SLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRP 261
           SLCK G + + +++F  M  +G NP V   T +++G+   G   ++  LF  ML  G  P
Sbjct: 3   SLCKYGKIKEDRDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAP 62

Query: 262 NLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIF 321
           ++ TFNV+I      G +++A  +   M   G+ P   TY +++   C +G++D A E F
Sbjct: 63  DIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKF 122

Query: 322 LSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQA 381
             M  +G      +Y+ LI G+C   ++ +A  L  +I++NG+R  ++ + ++++ L + 
Sbjct: 123 NQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKL 182

Query: 382 GQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHML-----------E 430
           G+   AQ +FD      + PD   YN+L+DG C    +++A+++F  +           E
Sbjct: 183 GRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGE 242

Query: 431 MNKFEFGIE----IFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRK 486
           M   + GI+    ++N +IDGL +AGR   A   FH++ + G+     TYSI++ GL + 
Sbjct: 243 M--LQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKN 300

Query: 487 GKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDT 546
              ++A      +       +++T NT++ G  Q  +  +  +L   ++     LVP   
Sbjct: 301 RCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRS--GLVPCAV 358

Query: 547 TFSIVVDLLAKDEKYHECSAVSKSSYRA 574
           T+SI++  L K+    E   +  S   A
Sbjct: 359 TYSIMITNLIKEGLVEEAEDMFSSMQNA 386



 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 83/307 (27%), Positives = 134/307 (43%), Gaps = 50/307 (16%)

Query: 305 MDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCK------------------- 345
           M   C  G+I   R++F +M  KG    V SY I++NGY                     
Sbjct: 1   MGSLCKYGKIKEDRDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGI 60

Query: 346 -----ILNV-----------EEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQK 389
                  NV           ++AM ++ ++  +GV+  V+TY T+++ L + G+   A +
Sbjct: 61  APDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAME 120

Query: 390 LFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLC 449
            F++M    V PD   Y+ LI G C +  + +A +L   +  N     I  F  +I+ LC
Sbjct: 121 KFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLC 180

Query: 450 KAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVV 509
           K GR+ +A  +F      GL P  V Y++++ G C  GK+EKA      M   G  PNVV
Sbjct: 181 KLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVV 240

Query: 510 -------------TFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLA 556
                         +N ++ G  +  +T       H+M E    +  +  T+SIV+  L 
Sbjct: 241 GEMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTES--GIAMNKCTYSIVLRGLF 298

Query: 557 KDEKYHE 563
           K+  + E
Sbjct: 299 KNRCFDE 305


>gi|224139020|ref|XP_002322960.1| predicted protein [Populus trichocarpa]
 gi|222867590|gb|EEF04721.1| predicted protein [Populus trichocarpa]
          Length = 694

 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 149/481 (30%), Positives = 249/481 (51%), Gaps = 17/481 (3%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
           P I S+N L  A  +    +   SF     ++G+LP+  T NILI     K + +     
Sbjct: 112 PGIRSYNALLNAFIEANLLEKAESFLAYFETVGILPNLQTYNILIKISVKKRQFV----- 166

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
             EA  L   M +  ++PDV +YGT+ING  ++G+L  AL +  +M    +E GL+   +
Sbjct: 167 --EAKGLLDWMWSKDLKPDVYSYGTVINGMVKSGDLVSALEVFDEM----FERGLVP--D 218

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEM-KGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
           +  Y+I+ID   K G   + KE++  + KG  + P VV    +I+G C  G ++E   ++
Sbjct: 219 VMCYNIMIDGFFKRGDYVQGKEIWERLVKGSCVYPNVVTYNVMINGLCKMGRFDESLEMW 278

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
             M       +L T++ +I  LC  G ++ A  + + M++R +  D  TYN+L++G+C  
Sbjct: 279 ERMKKNECEMDLFTYSSLICGLCDVGNVDGAVEVYKEMVKRSVVVDVVTYNALLNGFCRA 338

Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
           G+I  + E+++ M  + C H VVSYNI I G  +   VEEA+S++  +   G      TY
Sbjct: 339 GKIKESFELWVMMGKENC-HNVVSYNIFIRGLFENRKVEEAISVWELLRRRGSGADSTTY 397

Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
             L+ GL + G    A K+  E K    + D   Y+ ++DGL K   V EA+ + H ++ 
Sbjct: 398 GVLIHGLCKNGHLNKALKILKEAKDGGDKLDAFAYSSIVDGLSKQGRVDEALGIVHQMDK 457

Query: 432 NKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEK 491
              E    + N LI+G  +A +L+ A   F ++  KG  PTVV+Y+ +I+GLC+  +   
Sbjct: 458 YGCELSPHVCNPLINGFVRASKLEEAICFFREMETKGCSPTVVSYNTLINGLCKAERFSD 517

Query: 492 ANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIV 551
           A  F+  M +    P+++T++ LM G  Q  K    + L  ++    + L PD T  +I+
Sbjct: 518 AYSFVKEMLEKDWKPDMITYSLLMDGLCQGKKIDMALNLWRQVL--VKGLEPDVTMHNIL 575

Query: 552 V 552
           +
Sbjct: 576 M 576



 Score =  219 bits (558), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 148/537 (27%), Positives = 265/537 (49%), Gaps = 54/537 (10%)

Query: 58  EARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILI 117
           EA+    +M      P + S+  +   + K+    + +  + ++   GL+PD +  NI+I
Sbjct: 167 EAKGLLDWMWSKDLKPDVYSYGTVINGMVKSGDLVSALEVFDEMFERGLVPDVMCYNIMI 226

Query: 118 NCF---GNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRL 174
           + F   G+  +G  +  R+ + + ++         P+V+TY  +ING C+ G    +L +
Sbjct: 227 DGFFKRGDYVQGKEIWERLVKGSCVY---------PNVVTYNVMINGLCKMGRFDESLEM 277

Query: 175 HKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTL 234
            ++M   + E       ++F+YS +I  LC  G VD A E++ EM  R +   VV    L
Sbjct: 278 WERMKKNECE------MDLFTYSSLICGLCDVGNVDGAVEVYKEMVKRSVVVDVVTYNAL 331

Query: 235 IHGFCCAGNWEE----------------------VNGLF--------IEMLDL----GPR 260
           ++GFC AG  +E                      + GLF        I + +L    G  
Sbjct: 332 LNGFCRAGKIKESFELWVMMGKENCHNVVSYNIFIRGLFENRKVEEAISVWELLRRRGSG 391

Query: 261 PNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREI 320
            +  T+ V+I  LCK G +N+A  +L+     G   D F Y+S++DG    GR+D A  I
Sbjct: 392 ADSTTYGVLIHGLCKNGHLNKALKILKEAKDGGDKLDAFAYSSIVDGLSKQGRVDEALGI 451

Query: 321 FLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQ 380
              M   GC+ +    N LING+ +   +EEA+  +R++ + G   TV++YNTL++GL +
Sbjct: 452 VHQMDKYGCELSPHVCNPLINGFVRASKLEEAICFFREMETKGCSPTVVSYNTLINGLCK 511

Query: 381 AGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEI 440
           A +   A     EM   + +PD+ TY++L+DGLC+   +  A+ L+  + +   E  + +
Sbjct: 512 AERFSDAYSFVKEMLEKDWKPDMITYSLLMDGLCQGKKIDMALNLWRQVLVKGLEPDVTM 571

Query: 441 FNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYME 500
            N L+ GLC AG++++A  L+  + Q   +P +VT++ ++ GL +  + E A+     M 
Sbjct: 572 HNILMHGLCSAGKIEDALLLYSNMKQSNCLPNLVTHNTLMDGLYKARECEMASVIWACMF 631

Query: 501 KNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAK 557
           KNG  P+++++N  + G     + S  + L       +  ++P   T+ I+V  + K
Sbjct: 632 KNGFQPDIISYNITLKGLCSCGRISDGIALFDDAL--KNGILPTSITWYILVRAVLK 686



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 129/446 (28%), Positives = 229/446 (51%), Gaps = 35/446 (7%)

Query: 146 FGVRPDVITYGTLINGFC------------------------RTGNLSVALRLHKKMVSG 181
           FG +P + +Y  L+N F                         +T N+ + + + K+    
Sbjct: 108 FGCKPGIRSYNALLNAFIEANLLEKAESFLAYFETVGILPNLQTYNILIKISVKKRQFVE 167

Query: 182 -----DYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIH 236
                D+      K +++SY  +I+ + K G +  A E+F EM  RG+ P V+    +I 
Sbjct: 168 AKGLLDWMWSKDLKPDVYSYGTVINGMVKSGDLVSALEVFDEMFERGLVPDVMCYNIMID 227

Query: 237 GFCCAGNWEEVNGLFIEMLDLGP--RPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGL 294
           GF   G++ +   ++ E L  G    PN++T+NVMI+ LCK G+ +E+  + E M +   
Sbjct: 228 GFFKRGDYVQGKEIW-ERLVKGSCVYPNVVTYNVMINGLCKMGRFDESLEMWERMKKNEC 286

Query: 295 NPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMS 354
             D FTY+SL+ G C VG +D A E++  M  +     VV+YN L+NG+C+   ++E+  
Sbjct: 287 EMDLFTYSSLICGLCDVGNVDGAVEVYKEMVKRSVVVDVVTYNALLNGFCRAGKIKESFE 346

Query: 355 LYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLC 414
           L+  +        V++YN  + GLF+  +   A  +++ ++      D +TY +LI GLC
Sbjct: 347 LWVMMGKENC-HNVVSYNIFIRGLFENRKVEEAISVWELLRRRGSGADSTTYGVLIHGLC 405

Query: 415 KNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVV 474
           KN  + +A+K+    +    +     ++ ++DGL K GR+D A  + H++ + G   +  
Sbjct: 406 KNGHLNKALKILKEAKDGGDKLDAFAYSSIVDGLSKQGRVDEALGIVHQMDKYGCELSPH 465

Query: 475 TYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKM 534
             + +I+G  R  KLE+A  F   ME  GC+P VV++NTL++G  +  + S     + +M
Sbjct: 466 VCNPLINGFVRASKLEEAICFFREMETKGCSPTVVSYNTLINGLCKAERFSDAYSFVKEM 525

Query: 535 AEPERNLVPDDTTFSIVVDLLAKDEK 560
              E++  PD  T+S+++D L + +K
Sbjct: 526 L--EKDWKPDMITYSLLMDGLCQGKK 549



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 99/367 (26%), Positives = 189/367 (51%), Gaps = 5/367 (1%)

Query: 199 IIDSLCKEGLVDKAKELFLEMKG-RGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDL 257
           ++ +  K  + ++A + F +M+   G  P +     L++ F  A   E+          +
Sbjct: 84  VLKAYAKSKMPNEALDCFQKMEEIFGCKPGIRSYNALLNAFIEANLLEKAESFLAYFETV 143

Query: 258 GPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTA 317
           G  PNL T+N++I    K  +  EA GLL+ M  + L PD ++Y ++++G    G + +A
Sbjct: 144 GILPNLQTYNILIKISVKKRQFVEAKGLLDWMWSKDLKPDVYSYGTVINGMVKSGDLVSA 203

Query: 318 REIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNG-VRQTVITYNTLLS 376
            E+F  M  +G    V+ YNI+I+G+ K  +  +   ++ +++    V   V+TYN +++
Sbjct: 204 LEVFDEMFERGLVPDVMCYNIMIDGFFKRGDYVQGKEIWERLVKGSCVYPNVVTYNVMIN 263

Query: 377 GLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEF 436
           GL + G+   + ++++ MK    E DL TY+ LI GLC    V  AV+++  +       
Sbjct: 264 GLCKMGRFDESLEMWERMKKNECEMDLFTYSSLICGLCDVGNVDGAVEVYKEMVKRSVVV 323

Query: 437 GIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFL 496
            +  +N L++G C+AG++  ++EL+  + ++     VV+Y+I I GL    K+E+A    
Sbjct: 324 DVVTYNALLNGFCRAGKIKESFELWVMMGKEN-CHNVVSYNIFIRGLFENRKVEEAISVW 382

Query: 497 LYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLA 556
             + + G   +  T+  L+HG  +N   +K +++L +  +    L  D   +S +VD L+
Sbjct: 383 ELLRRRGSGADSTTYGVLIHGLCKNGHLNKALKILKEAKDGGDKL--DAFAYSSIVDGLS 440

Query: 557 KDEKYHE 563
           K  +  E
Sbjct: 441 KQGRVDE 447



 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 97/388 (25%), Positives = 192/388 (49%), Gaps = 7/388 (1%)

Query: 157 TLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELF 216
           T++  + ++   + AL   +KM     E     K  I SY+ ++++  +  L++KA+   
Sbjct: 83  TVLKAYAKSKMPNEALDCFQKM-----EEIFGCKPGIRSYNALLNAFIEANLLEKAESFL 137

Query: 217 LEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKG 276
              +  GI P +     LI        + E  GL   M     +P++ ++  +I+ + K 
Sbjct: 138 AYFETVGILPNLQTYNILIKISVKKRQFVEAKGLLDWMWSKDLKPDVYSYGTVINGMVKS 197

Query: 277 GKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKH-TVVS 335
           G +  A  + + M +RGL PD   YN ++DG+   G     +EI+  +    C +  VV+
Sbjct: 198 GDLVSALEVFDEMFERGLVPDVMCYNIMIDGFFKRGDYVQGKEIWERLVKGSCVYPNVVT 257

Query: 336 YNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMK 395
           YN++ING CK+   +E++ ++ ++  N     + TY++L+ GL   G    A +++ EM 
Sbjct: 258 YNVMINGLCKMGRFDESLEMWERMKKNECEMDLFTYSSLICGLCDVGNVDGAVEVYKEMV 317

Query: 396 LYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLD 455
             +V  D+ TYN L++G C+   ++E+ +L+ M+        +  +N  I GL +  +++
Sbjct: 318 KRSVVVDVVTYNALLNGFCRAGKIKESFELWVMMGKENCH-NVVSYNIFIRGLFENRKVE 376

Query: 456 NAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLM 515
            A  ++  L ++G      TY ++IHGLC+ G L KA   L   +  G   +   +++++
Sbjct: 377 EAISVWELLRRRGSGADSTTYGVLIHGLCKNGHLNKALKILKEAKDGGDKLDAFAYSSIV 436

Query: 516 HGFLQNNKTSKVVELLHKMAEPERNLVP 543
            G  +  +  + + ++H+M +    L P
Sbjct: 437 DGLSKQGRVDEALGIVHQMDKYGCELSP 464



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 60/238 (25%), Positives = 115/238 (48%), Gaps = 13/238 (5%)

Query: 79  NLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATW 138
           N L     +    +  I F+R++ + G  P  ++ N LIN       GLC   R  +A  
Sbjct: 468 NPLINGFVRASKLEEAICFFREMETKGCSPTVVSYNTLIN-------GLCKAERFSDAYS 520

Query: 139 LFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSI 198
             K M+    +PD+ITY  L++G C+   + +AL L ++++    E       ++  ++I
Sbjct: 521 FVKEMLEKDWKPDMITYSLLMDGLCQGKKIDMALNLWRQVLVKGLE------PDVTMHNI 574

Query: 199 IIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLG 258
           ++  LC  G ++ A  L+  MK     P +V   TL+ G   A   E  + ++  M   G
Sbjct: 575 LMHGLCSAGKIEDALLLYSNMKQSNCLPNLVTHNTLMDGLYKARECEMASVIWACMFKNG 634

Query: 259 PRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDT 316
            +P+++++N+ +  LC  G+I++   L +  ++ G+ P   T+  L+     +G +D+
Sbjct: 635 FQPDIISYNITLKGLCSCGRISDGIALFDDALKNGILPTSITWYILVRAVLKLGPLDS 692


>gi|255556711|ref|XP_002519389.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223541456|gb|EEF43006.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 634

 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 144/448 (32%), Positives = 224/448 (50%), Gaps = 37/448 (8%)

Query: 143 MIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDS 202
           MI  G  P  + + +L++ +CR+G+   A +L KKMV   Y+ G +       Y+I+I  
Sbjct: 2   MITEGCYPSPMIFNSLVHAYCRSGDYFYAYKLLKKMVICGYQPGYVV------YNILIGG 55

Query: 203 LCKE---------GLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIE 253
           +C           GL ++A    LEM G  +N  V VC       CC G +E+   +  E
Sbjct: 56  ICSTEDLPSMEVIGLAERAYNEMLEM-GVVLN-KVNVCN-FTRCLCCIGKFEKAYNVIRE 112

Query: 254 MLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGR 313
           M+  G  P+  T++ +I  LC   K+ +A  L + M + G+ PD +TY +L+D +C VG 
Sbjct: 113 MMSKGFIPDSSTYSKVIGYLCNASKVEKAFQLFQEMKRNGITPDVYTYTTLLDRFCKVGL 172

Query: 314 IDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNT 373
           I+ AR  F  M   GC   VV+Y  LI+ Y K   +  A  ++  ++SNG    ++TY  
Sbjct: 173 IEQARNWFDEMQQDGCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTA 232

Query: 374 LLSGLFQAGQAGYAQKLFDEMKLYNV-----------------EPDLSTYNILIDGLCKN 416
           L+ G  +AG+   A +++  MK   V                 EP++ TY  L+DGLCK 
Sbjct: 233 LIDGHCKAGETEKACQIYARMKNDKVDIPDVDIYFRIVDSELKEPNVVTYGALVDGLCKA 292

Query: 417 NCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTY 476
           + V+EA  L   + +   E    I++ LIDG CK G+LD A E+F K+   G  P V TY
Sbjct: 293 HKVKEARDLLETMSLEGCEPNQIIYDALIDGFCKVGKLDEAQEVFTKMLGHGCSPNVYTY 352

Query: 477 SIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAE 536
           S +I  L +  +L+ A   L  M +N CAPNVV +  ++ G  +  KT +   L+  M  
Sbjct: 353 SSLIDKLFKDKRLDLALKVLTKMLENSCAPNVVIYTEMVDGLCKVGKTDEAYRLMLMM-- 410

Query: 537 PERNLVPDDTTFSIVVDLLAKDEKYHEC 564
            E+   P+  T++ ++D   K  +   C
Sbjct: 411 EEKGCYPNVVTYTAMIDGFGKAGRVDRC 438



 Score =  218 bits (555), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 147/483 (30%), Positives = 232/483 (48%), Gaps = 26/483 (5%)

Query: 71  PSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVE 130
           PSP I  FN L  A  ++  Y       +K+V  G  P ++  NILI    + E    +E
Sbjct: 9   PSPMI--FNSLVHAYCRSGDYFYAYKLLKKMVICGYQPGYVVYNILIGGICSTEDLPSME 66

Query: 131 NRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISK 190
             I  A   +  M+  GV  + +         C  G    A  + ++M+S     G I  
Sbjct: 67  -VIGLAERAYNEMLEMGVVLNKVNVCNFTRCLCCIGKFEKAYNVIREMMS----KGFIPD 121

Query: 191 TNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGL 250
           ++  +YS +I  LC    V+KA +LF EMK  GI P V   TTL+  FC  G  E+    
Sbjct: 122 SS--TYSKVIGYLCNASKVEKAFQLFQEMKRNGITPDVYTYTTLLDRFCKVGLIEQARNW 179

Query: 251 FIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCL 310
           F EM   G  PN++T+  +I    K  K++ AN + E+M+  G  P+  TY +L+DG+C 
Sbjct: 180 FDEMQQDGCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALIDGHCK 239

Query: 311 VGRIDTAREIFLSMH-----------------SKGCKHTVVSYNILINGYCKILNVEEAM 353
            G  + A +I+  M                  S+  +  VV+Y  L++G CK   V+EA 
Sbjct: 240 AGETEKACQIYARMKNDKVDIPDVDIYFRIVDSELKEPNVVTYGALVDGLCKAHKVKEAR 299

Query: 354 SLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGL 413
            L   +   G     I Y+ L+ G  + G+   AQ++F +M  +   P++ TY+ LID L
Sbjct: 300 DLLETMSLEGCEPNQIIYDALIDGFCKVGKLDEAQEVFTKMLGHGCSPNVYTYSSLIDKL 359

Query: 414 CKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTV 473
            K+  +  A+K+   +  N     + I+  ++DGLCK G+ D A+ L   + +KG  P V
Sbjct: 360 FKDKRLDLALKVLTKMLENSCAPNVVIYTEMVDGLCKVGKTDEAYRLMLMMEEKGCYPNV 419

Query: 474 VTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHK 533
           VTY+ MI G  + G++++  + L  M   GCAPN +T+  L++            +LL +
Sbjct: 420 VTYTAMIDGFGKAGRVDRCLELLQLMTSKGCAPNFITYRVLINHCCAAGLLDDAHKLLEE 479

Query: 534 MAE 536
           M +
Sbjct: 480 MKQ 482



 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 145/542 (26%), Positives = 257/542 (47%), Gaps = 54/542 (9%)

Query: 41  LNEFLHENCKSGIINLNEARYFFGY-----MTHMQPSPPISSFNLLFGAVAKNRHYDA-- 93
            N  +H  C+SG        YF+ Y     M      P    +N+L G +       +  
Sbjct: 14  FNSLVHAYCRSG-------DYFYAYKLLKKMVICGYQPGYVVYNILIGGICSTEDLPSME 66

Query: 94  VISF----YRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVR 149
           VI      Y +++ +G++     LN +  C  N  R LC   + ++A  + + M++ G  
Sbjct: 67  VIGLAERAYNEMLEMGVV-----LNKVNVC--NFTRCLCCIGKFEKAYNVIREMMSKGFI 119

Query: 150 PDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLV 209
           PD  TY  +I   C    +  A +L ++M      NG+    ++++Y+ ++D  CK GL+
Sbjct: 120 PDSSTYSKVIGYLCNASKVEKAFQLFQEM----KRNGITP--DVYTYTTLLDRFCKVGLI 173

Query: 210 DKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVM 269
           ++A+  F EM+  G  P VV  T LIH +         N +F  ML  G  PN++T+  +
Sbjct: 174 EQARNWFDEMQQDGCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTAL 233

Query: 270 IDCLCKGGKINEANGLLELMIQRGLN-----------------PDRFTYNSLMDGYCLVG 312
           ID  CK G+  +A  +   M    ++                 P+  TY +L+DG C   
Sbjct: 234 IDGHCKAGETEKACQIYARMKNDKVDIPDVDIYFRIVDSELKEPNVVTYGALVDGLCKAH 293

Query: 313 RIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYN 372
           ++  AR++  +M  +GC+   + Y+ LI+G+CK+  ++EA  ++ +++ +G    V TY+
Sbjct: 294 KVKEARDLLETMSLEGCEPNQIIYDALIDGFCKVGKLDEAQEVFTKMLGHGCSPNVYTYS 353

Query: 373 TLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMN 432
           +L+  LF+  +   A K+  +M   +  P++  Y  ++DGLCK     EA +L  M+E  
Sbjct: 354 SLIDKLFKDKRLDLALKVLTKMLENSCAPNVVIYTEMVDGLCKVGKTDEAYRLMLMMEEK 413

Query: 433 KFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKA 492
                +  +  +IDG  KAGR+D   EL   +  KG  P  +TY ++I+  C  G L+ A
Sbjct: 414 GCYPNVVTYTAMIDGFGKAGRVDRCLELLQLMTSKGCAPNFITYRVLINHCCAAGLLDDA 473

Query: 493 NDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAE-PERNLVPDDTTFSIV 551
           +  L  M++     ++  +  ++ GF     + + V  L  +AE  E   VP    + ++
Sbjct: 474 HKLLEEMKQTYWPKHIGMYRKVIEGF-----SHEFVASLGLLAELSEDGSVPILPVYKLL 528

Query: 552 VD 553
           +D
Sbjct: 529 ID 530



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 122/467 (26%), Positives = 213/467 (45%), Gaps = 54/467 (11%)

Query: 44  FLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVS 103
            L   CK G+I   +AR +F  M     +P + ++  L  A  K R        +  ++S
Sbjct: 163 LLDRFCKVGLIE--QARNWFDEMQQDGCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLS 220

Query: 104 IGLLPDFLTLNILINCF---GNKERGLCVENRIK-------EATWLFKNMIAFGVRPDVI 153
            G +P+ +T   LI+     G  E+   +  R+K       +    F+ + +    P+V+
Sbjct: 221 NGCVPNIVTYTALIDGHCKAGETEKACQIYARMKNDKVDIPDVDIYFRIVDSELKEPNVV 280

Query: 154 TYGTLINGFCRTGNLSVALRLHKKM-VSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKA 212
           TYG L++G C+   +  A  L + M + G   N +I       Y  +ID  CK G +D+A
Sbjct: 281 TYGALVDGLCKAHKVKEARDLLETMSLEGCEPNQII-------YDALIDGFCKVGKLDEA 333

Query: 213 KELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDC 272
           +E+F +M G G +P V   ++LI         +    +  +ML+    PN++ +  M+D 
Sbjct: 334 QEVFTKMLGHGCSPNVYTYSSLIDKLFKDKRLDLALKVLTKMLENSCAPNVVIYTEMVDG 393

Query: 273 LCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHT 332
           LCK GK +EA  L+ +M ++G  P+  TY +++DG+   GR+D   E+   M SKGC   
Sbjct: 394 LCKVGKTDEAYRLMLMMEEKGCYPNVVTYTAMIDGFGKAGRVDRCLELLQLMTSKGCAPN 453

Query: 333 VVSYNILINGYCKILNVEEA---------------MSLYRQIIS---------------- 361
            ++Y +LIN  C    +++A               + +YR++I                 
Sbjct: 454 FITYRVLINHCCAAGLLDDAHKLLEEMKQTYWPKHIGMYRKVIEGFSHEFVASLGLLAEL 513

Query: 362 --NGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCV 419
             +G    +  Y  L+    +AG+   A +L +E+  ++     +TY  LI+ L     V
Sbjct: 514 SEDGSVPILPVYKLLIDNFIKAGRLEMALELHEELSSFSAAYQ-NTYVSLIESLTLACKV 572

Query: 420 QEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQ 466
            +A KL+  +    F   + +  CLI GL + G+ + A +L   + Q
Sbjct: 573 DKAFKLYSDMTRRGFVPELSMLVCLIKGLLRVGKWEEALQLSDSICQ 619



 Score =  125 bits (315), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 80/270 (29%), Positives = 125/270 (46%), Gaps = 6/270 (2%)

Query: 288 LMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKIL 347
           +MI  G  P    +NSL+  YC  G    A ++   M   G +   V YNILI G C   
Sbjct: 1   MMITEGCYPSPMIFNSLVHAYCRSGDYFYAYKLLKKMVICGYQPGYVVYNILIGGICSTE 60

Query: 348 NVEE------AMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEP 401
           ++        A   Y +++  GV    +        L   G+   A  +  EM      P
Sbjct: 61  DLPSMEVIGLAERAYNEMLEMGVVLNKVNVCNFTRCLCCIGKFEKAYNVIREMMSKGFIP 120

Query: 402 DLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELF 461
           D STY+ +I  LC  + V++A +LF  ++ N     +  +  L+D  CK G ++ A   F
Sbjct: 121 DSSTYSKVIGYLCNASKVEKAFQLFQEMKRNGITPDVYTYTTLLDRFCKVGLIEQARNWF 180

Query: 462 HKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQN 521
            ++ Q G  P VVTY+ +IH   +  KL +AN+    M  NGC PN+VT+  L+ G  + 
Sbjct: 181 DEMQQDGCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALIDGHCKA 240

Query: 522 NKTSKVVELLHKMAEPERNLVPDDTTFSIV 551
            +T K  ++  +M   + ++   D  F IV
Sbjct: 241 GETEKACQIYARMKNDKVDIPDVDIYFRIV 270


>gi|255561697|ref|XP_002521858.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223538896|gb|EEF40494.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 533

 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 149/485 (30%), Positives = 243/485 (50%), Gaps = 28/485 (5%)

Query: 62  FFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFG 121
           FF  M      P + ++N +     K +  D    F R +   GL P+ +T N++IN   
Sbjct: 5   FFKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIIN--- 61

Query: 122 NKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSG 181
               GLC + R+KE + +   M   G  PD +TY TL+NG+C+ GN   AL LH +MV  
Sbjct: 62  ----GLCRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMV-- 115

Query: 182 DYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCA 241
              NGL    N+ +Y+ +I+S+CK G +++A E F +M  RG+ P     TT+I+GF   
Sbjct: 116 --RNGL--SPNVVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQ 171

Query: 242 GNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTY 301
           G  +E   +  EM   G  P+++T+N +I+  C  G++ EA GLL+ M+ +G+ PD  +Y
Sbjct: 172 GLLDEAYRVLNEMTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSY 231

Query: 302 NSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIIS 361
           ++++ G+     +D A ++ + M  K      V+Y+ LI G C+   + EA  +++++++
Sbjct: 232 STIISGFARNQELDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLT 291

Query: 362 NGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQE 421
             +     TY TL++   + G    A  L DEM      PD  TYN+LI+GL K    +E
Sbjct: 292 IKLPPDEFTYTTLINAYCKEGDLNKALHLHDEMIQKGFLPDAVTYNVLINGLNKQARSKE 351

Query: 422 A----VKLFHMLEM-NKFEFGIEIFNC----------LIDGLCKAGRLDNAWELFHKLPQ 466
           A    +KLF+   + +   +   I NC          L+ G C  G +D A ++F  +  
Sbjct: 352 ARRLLLKLFYDDSIPSAVTYNTLIENCCNIEFKSAVALVKGFCMKGLMDEADQVFESMIN 411

Query: 467 KGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSK 526
           K   P    Y+++IHG CR G + KA      M      P+ VT   L+          +
Sbjct: 412 KNHKPNEAIYNVIIHGHCRIGNVLKAYKLYKEMVHVDFVPHTVTVLALVKALFTEGMDGE 471

Query: 527 VVELL 531
           + E++
Sbjct: 472 LNEVI 476



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 140/496 (28%), Positives = 231/496 (46%), Gaps = 30/496 (6%)

Query: 95  ISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVIT 154
           + F++++   G LP+ +T N +I+       G C   R  EA    ++M   G+ P++IT
Sbjct: 3   LRFFKEMERNGCLPNVVTYNTMID-------GYCKLKRTDEAFGFLRSMGLKGLEPNLIT 55

Query: 155 YGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKE 214
           +  +ING CR G L     +  +M    Y        +  +Y+ +++  CKEG   +A  
Sbjct: 56  FNMIINGLCRDGRLKETSEVLVEMSRKGY------VPDEVTYNTLVNGYCKEGNFHQALV 109

Query: 215 LFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLC 274
           L  EM   G++P VV  T+LI+  C AGN       F +M   G  PN  T+  +I+   
Sbjct: 110 LHAEMVRNGLSPNVVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFA 169

Query: 275 KGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVV 334
           + G ++EA  +L  M + G  P   TYN+L++G+C++GR++ A  +   M  KG    VV
Sbjct: 170 QQGLLDEAYRVLNEMTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVV 229

Query: 335 SYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEM 394
           SY+ +I+G+ +   ++ A  +  ++I   V    +TY++L+ GL +  +   A  +F EM
Sbjct: 230 SYSTIISGFARNQELDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEM 289

Query: 395 KLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRL 454
               + PD  TY  LI+  CK   + +A+ L   +    F      +N LI+GL K  R 
Sbjct: 290 LTIKLPPDEFTYTTLINAYCKEGDLNKALHLHDEMIQKGFLPDAVTYNVLINGLNKQARS 349

Query: 455 DNAWELFHKLPQKGLVPTVVTYSIMIH---------------GLCRKGKLEKANDFLLYM 499
             A  L  KL     +P+ VTY+ +I                G C KG +++A+     M
Sbjct: 350 KEARRLLLKLFYDDSIPSAVTYNTLIENCCNIEFKSAVALVKGFCMKGLMDEADQVFESM 409

Query: 500 EKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDE 559
                 PN   +N ++HG  +     K  +L  +M   +   VP   T   +V  L  + 
Sbjct: 410 INKNHKPNEAIYNVIIHGHCRIGNVLKAYKLYKEMVHVD--FVPHTVTVLALVKALFTEG 467

Query: 560 KYHECSAVSKSSYRAC 575
              E + V     R+C
Sbjct: 468 MDGELNEVIGDILRSC 483



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 106/352 (30%), Positives = 171/352 (48%), Gaps = 30/352 (8%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CK+G  NLN A  FF  M      P   ++  +    A+    D       ++   G +P
Sbjct: 134 CKAG--NLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLNEMTRSGFIP 191

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
             +T N LIN       G CV  R++EA  L ++M+  GV PDV++Y T+I+GF R   L
Sbjct: 192 SIVTYNALIN-------GHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQEL 244

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
             A ++  +M+      G     +  +YS +I  LC++  + +A ++F EM    + P  
Sbjct: 245 DRAFQMKVEMI------GKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDE 298

Query: 229 VVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLEL 288
              TTLI+ +C  G+  +   L  EM+  G  P+ +T+NV+I+ L K  +  EA  LL  
Sbjct: 299 FTYTTLINAYCKEGDLNKALHLHDEMIQKGFLPDAVTYNVLINGLNKQARSKEARRLLLK 358

Query: 289 MIQRGLNPDRFTYNSLMD---------------GYCLVGRIDTAREIFLSMHSKGCKHTV 333
           +      P   TYN+L++               G+C+ G +D A ++F SM +K  K   
Sbjct: 359 LFYDDSIPSAVTYNTLIENCCNIEFKSAVALVKGFCMKGLMDEADQVFESMINKNHKPNE 418

Query: 334 VSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAG 385
             YN++I+G+C+I NV +A  LY++++        +T   L+  LF  G  G
Sbjct: 419 AIYNVIIHGHCRIGNVLKAYKLYKEMVHVDFVPHTVTVLALVKALFTEGMDG 470



 Score = 69.3 bits (168), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 36/130 (27%), Positives = 69/130 (53%), Gaps = 2/130 (1%)

Query: 457 AWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMH 516
               F ++ + G +P VVTY+ MI G C+  + ++A  FL  M   G  PN++TFN +++
Sbjct: 2   GLRFFKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIIN 61

Query: 517 GFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKSSYRACL 576
           G  ++ +  +  E+L +M+   +  VPD+ T++ +V+   K+  +H+   +     R  L
Sbjct: 62  GLCRDGRLKETSEVLVEMSR--KGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGL 119

Query: 577 YVTIFQPSSL 586
              +   +SL
Sbjct: 120 SPNVVTYTSL 129



 Score = 68.9 bits (167), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 57/231 (24%), Positives = 94/231 (40%), Gaps = 33/231 (14%)

Query: 56  LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNI 115
           L EA   F  M  ++  P   ++  L  A  K    +  +  + +++  G LPD +T N+
Sbjct: 279 LTEACDMFQEMLTIKLPPDEFTYTTLINAYCKEGDLNKALHLHDEMIQKGFLPDAVTYNV 338

Query: 116 LINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLH 175
           LIN       GL  + R KEA  L   +      P  +TY TLI   C     ++  +  
Sbjct: 339 LIN-------GLNKQARSKEARRLLLKLFYDDSIPSAVTYNTLIENCC-----NIEFKSA 386

Query: 176 KKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLI 235
             +V G                      C +GL+D+A ++F  M  +   P   +   +I
Sbjct: 387 VALVKG---------------------FCMKGLMDEADQVFESMINKNHKPNEAIYNVII 425

Query: 236 HGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLL 286
           HG C  GN  +   L+ EM+ +   P+ +T   ++  L   G   E N ++
Sbjct: 426 HGHCRIGNVLKAYKLYKEMVHVDFVPHTVTVLALVKALFTEGMDGELNEVI 476


>gi|357498031|ref|XP_003619304.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494319|gb|AES75522.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 805

 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 143/473 (30%), Positives = 237/473 (50%), Gaps = 70/473 (14%)

Query: 63  FGYMTHMQPSPPISSFNLLFGAVAKNR-HYDAVISFYRKLVSIGLLPDFLTLNILINCFG 121
           F  M  M+ +P I  FN +   + K + HY  V+S   ++ S G+ PD  TL+ILINC+ 
Sbjct: 193 FNRMLQMRHTPSIVEFNKILTYLIKTKNHYPTVLSLSTQMESKGVKPDLFTLSILINCY- 251

Query: 122 NKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSG 181
                             FK     G  P+ IT  TLI G C  G ++ AL  H  +++ 
Sbjct: 252 -----------------YFK----MGYEPNTITLTTLIKGLCLNGKVNEALLFHDHVLAL 290

Query: 182 DYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCA 241
            +        N  +Y I+I+ LCK G    A ++  +++G+ +N  VV+ +T+I G C  
Sbjct: 291 GFH------LNHVTYGILINGLCKMGQTRAALQVLRQIEGKLVNTNVVMYSTVIDGLCKD 344

Query: 242 GNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTY 301
               +  GL+ EM+     P ++TF              +A  L   M+ + +NP+ +T+
Sbjct: 345 KLVIDAYGLYSEMIVKRIPPTVVTF--------------KAFSLFHEMVLKNINPNVYTF 390

Query: 302 NSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIIS 361
           N L+D  C  G+I  A+ + + M                        V+EA++L+ ++  
Sbjct: 391 NILVDALCKDGKIKEAKNVIIKM------------------------VDEALNLFTEM-- 424

Query: 362 NGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQE 421
              +   ++YNTL+ G  ++G+  +A KL D+M+     P++ TYN L+  LCKN+ V +
Sbjct: 425 -HCKPNTVSYNTLIDGFCKSGRLSHAWKLLDQMRDRGQPPNVITYNSLLHALCKNHHVDK 483

Query: 422 AVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIH 481
           A+ L +  +    +  +  +N L+DGLCK GRL +A  +F  L  KG      TY+IMI+
Sbjct: 484 AIALVNNFKDQGIQPDMHTYNTLVDGLCKQGRLKDAQLIFQDLLIKGYNLPTWTYNIMIN 543

Query: 482 GLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKM 534
           GLC +G L++A   L  ME NGC P+VVT+ T++H   + ++  K  +L+ ++
Sbjct: 544 GLCLEGLLDEAETLLSKMEDNGCIPDVVTYQTIIHALFEKDENDKAEKLVREL 596



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 98/372 (26%), Positives = 167/372 (44%), Gaps = 46/372 (12%)

Query: 208 LVDKAKELFLEMKGRGINPAVV----VCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNL 263
           +VD A   F  M      P++V    + T LI       ++  V  L  +M   G +P+L
Sbjct: 185 VVDNAVLSFNRMLQMRHTPSIVEFNKILTYLIK---TKNHYPTVLSLSTQMESKGVKPDL 241

Query: 264 LTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLS 323
            T +++I+C                  + G  P+  T  +L+ G CL G+++ A      
Sbjct: 242 FTLSILINCY---------------YFKMGYEPNTITLTTLIKGLCLNGKVNEALLFHDH 286

Query: 324 MHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQ 383
           + + G     V+Y ILING CK+     A+ + RQI    V   V+ Y+T++ GL +   
Sbjct: 287 VLALGFHLNHVTYGILINGLCKMGQTRAALQVLRQIEGKLVNTNVVMYSTVIDGLCKDKL 346

Query: 384 AGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNC 443
              A  L+ EM +  + P + T+              +A  LFH + +      +  FN 
Sbjct: 347 VIDAYGLYSEMIVKRIPPTVVTF--------------KAFSLFHEMVLKNINPNVYTFNI 392

Query: 444 LIDGLCKAGRLDNAWELFHKLPQKGL--------VPTVVTYSIMIHGLCRKGKLEKANDF 495
           L+D LCK G++  A  +  K+  + L         P  V+Y+ +I G C+ G+L  A   
Sbjct: 393 LVDALCKDGKIKEAKNVIIKMVDEALNLFTEMHCKPNTVSYNTLIDGFCKSGRLSHAWKL 452

Query: 496 LLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLL 555
           L  M   G  PNV+T+N+L+H   +N+   K + L++     ++ + PD  T++ +VD L
Sbjct: 453 LDQMRDRGQPPNVITYNSLLHALCKNHHVDKAIALVNNFK--DQGIQPDMHTYNTLVDGL 510

Query: 556 AKDEKYHECSAV 567
            K  +  +   +
Sbjct: 511 CKQGRLKDAQLI 522



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 74/253 (29%), Positives = 128/253 (50%), Gaps = 4/253 (1%)

Query: 135 EATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYE--NGLISKTN 192
           +A  LF  M+   + P+V T+  L++  C+ G +  A  +  KMV         +  K N
Sbjct: 370 KAFSLFHEMVLKNINPNVYTFNILVDALCKDGKIKEAKNVIIKMVDEALNLFTEMHCKPN 429

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
             SY+ +ID  CK G +  A +L  +M+ RG  P V+   +L+H  C   + ++   L  
Sbjct: 430 TVSYNTLIDGFCKSGRLSHAWKLLDQMRDRGQPPNVITYNSLLHALCKNHHVDKAIALVN 489

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
              D G +P++ T+N ++D LCK G++ +A  + + ++ +G N   +TYN +++G CL G
Sbjct: 490 NFKDQGIQPDMHTYNTLVDGLCKQGRLKDAQLIFQDLLIKGYNLPTWTYNIMINGLCLEG 549

Query: 313 RIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQ--TVIT 370
            +D A  +   M   GC   VV+Y  +I+   +    ++A  L R++I    R+  T I 
Sbjct: 550 LLDEAETLLSKMEDNGCIPDVVTYQTIIHALFEKDENDKAEKLVRELIVRVFRKSPTDIR 609

Query: 371 YNTLLSGLFQAGQ 383
               L+ L Q G+
Sbjct: 610 DGRYLTTLTQRGK 622


>gi|34015232|gb|AAQ56425.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|34015270|gb|AAQ56462.1| putative fertility restorer [Oryza sativa Japonica Group]
          Length = 1007

 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 145/482 (30%), Positives = 241/482 (50%), Gaps = 17/482 (3%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
           P +  +N +  A+ K+ +     +  +K+    + PD  T   +I        G C ++ 
Sbjct: 213 PNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMI-------LGHCRKHD 265

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
           +  A  +F  M   G  P+ +TY TLING C +G ++ A  L ++M+     +G++   +
Sbjct: 266 LDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMIL----HGILPTAH 321

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
             +  II  +LC  G  + A  LF++MK +G  P V   T LI G C +G  +   GLF 
Sbjct: 322 TCTGPII--ALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFH 379

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
            M   G  PN +T+N +I+ L +  +I  A  +L LM + G +P+  TYN ++ GYC++G
Sbjct: 380 RMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILG 439

Query: 313 RIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYN 372
               A  +  +M  +G    +V+YN +I GYC   N   A+ +   +   G +    +Y 
Sbjct: 440 DPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYT 499

Query: 373 TLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMN 432
            L+ G  +  +   A  LF+EM    + P+  TY  LIDG CK+  +  A  L   ++ +
Sbjct: 500 ELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRS 559

Query: 433 KFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKA 492
                ++ +N LI GL K      A EL   + ++G+ P VVTY+ MI GLC+ G    A
Sbjct: 560 GCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLA 619

Query: 493 NDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERN-LVPDDTTFSIV 551
            +    M + GC PN++T+++L+    Q  K  +   L    AE ER+ L+PD+ T+  +
Sbjct: 620 LEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLF---AELERHGLIPDEITYVKM 676

Query: 552 VD 553
           ++
Sbjct: 677 IE 678



 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 133/453 (29%), Positives = 222/453 (49%), Gaps = 31/453 (6%)

Query: 140 FKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKT-------- 191
           +  M++ GV+P+++ Y  +IN  C+ GN++ A  + KK+   +      + T        
Sbjct: 203 YHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCR 262

Query: 192 ---------------------NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVV 230
                                N  +YS +I+ LC  G V++A +L  EM   GI P    
Sbjct: 263 KHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHT 322

Query: 231 CTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMI 290
           CT  I   C  G +E+   LF++M + G  PN+ T+  +I  LC  G +  A GL   M 
Sbjct: 323 CTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMS 382

Query: 291 QRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVE 350
           + G+ P+  TYN+L++      RI  A  +   M   GC   +V+YN +I GYC + + +
Sbjct: 383 RDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPK 442

Query: 351 EAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILI 410
           +AM +   ++  G    ++TYNT++ G   +G    A ++ D M+    +PD  +Y  LI
Sbjct: 443 KAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELI 502

Query: 411 DGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLV 470
            G CK + ++ A  LF+ +  +        +  LIDG CK  +LD A  L   + + G  
Sbjct: 503 CGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCR 562

Query: 471 PTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVEL 530
           P V TY+++IHGL ++     A +    M + G  PNVVT+  ++ G  +N  TS  +E+
Sbjct: 563 PNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEM 622

Query: 531 LHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
            +KM   E+  +P+  T+S ++  L ++ K  E
Sbjct: 623 FNKMI--EQGCLPNLLTYSSLIRALGQEGKVEE 653



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 145/536 (27%), Positives = 241/536 (44%), Gaps = 45/536 (8%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           C SG++ +  A   F  M+     P   ++N L   + +NR           +   G  P
Sbjct: 366 CVSGLLKV--AIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSP 423

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           + +T N +I       +G C+    K+A  +  NM+  G   +++TY T+I G+C +GN 
Sbjct: 424 NIVTYNEMI-------KGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNT 476

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
           + ALR+   M  G        K + +SY+ +I   CK   ++ A  LF EM   G+ P  
Sbjct: 477 TSALRILDLMRDGG------CKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNE 530

Query: 229 VVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLEL 288
           V  T LI G+C     +    L   M   G RPN+ T+NV+I  L K    + A  L ++
Sbjct: 531 VTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKV 590

Query: 289 MIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILN 348
           MI+ G+ P+  TY +++DG C  G    A E+F  M  +GC   +++Y+ LI    +   
Sbjct: 591 MIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGK 650

Query: 349 VEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNI 408
           VEEA +L+ ++  +G+    ITY  ++     +G+  +A      M     +P L TY +
Sbjct: 651 VEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGV 710

Query: 409 LIDGLCKN-----------------NCV-------QEAVKLFHMLEMNKFEFG--IEIFN 442
           LI GL KN                 NC        Q+AV +    ++ + + G  +++ N
Sbjct: 711 LIKGL-KNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSA-KLAELDPGLSVQVQN 768

Query: 443 CLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKN 502
            L+  L  AGR   A EL   +  +GL P    Y+ ++  L R   ++ A     +M   
Sbjct: 769 ALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQ 828

Query: 503 GCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKD 558
           GC  ++  +  L+    Q ++  +       M    R   PDD   ++++D L +D
Sbjct: 829 GCEVHLNGYKELICALCQLHRRKEARITFENML--MRTWNPDDVVQAVLIDGLLRD 882



 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 103/357 (28%), Positives = 180/357 (50%), Gaps = 33/357 (9%)

Query: 251 FIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCL 310
           +  ML  G +PNLL +N +I+ LCK G + +A  +++ + +  ++PD FTY S++ G+C 
Sbjct: 203 YHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCR 262

Query: 311 VGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVIT 370
              +D+A ++F  M  +GC+   V+Y+ LING C    V EA  L R++I +G+  T  T
Sbjct: 263 KHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHT 322

Query: 371 YNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLE 430
               +  L   G    A +LF +MK    EP++ TY  LI GLC +  ++ A+ LFH + 
Sbjct: 323 CTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMS 382

Query: 431 MNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLE 490
            +        +N LI+ L +  R+  A+ + + + + G  P +VTY+ MI G C  G  +
Sbjct: 383 RDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPK 442

Query: 491 KANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAE----PER------- 539
           KA   +  M + G + N+VT+NT++ G+  +  T+  + +L  M +    P+        
Sbjct: 443 KAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELI 502

Query: 540 ----------------------NLVPDDTTFSIVVDLLAKDEKYHECSAVSKSSYRA 574
                                  L P++ T++ ++D   KDEK    +++ +   R+
Sbjct: 503 CGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRS 559



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 113/413 (27%), Positives = 186/413 (45%), Gaps = 30/413 (7%)

Query: 126 GLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYEN 185
           G C  ++++ A  LF  M+  G+ P+ +TY  LI+G+C+   L  A  L + M       
Sbjct: 504 GFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSG--- 560

Query: 186 GLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWE 245
               + N+ +Y+++I  L K+     A+EL   M   GI P VV  T +I G C  G+  
Sbjct: 561 ---CRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTS 617

Query: 246 EVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLM 305
               +F +M++ G  PNLLT++ +I  L + GK+ EA  L   + + GL PD  TY  ++
Sbjct: 618 LALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMI 677

Query: 306 DGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYC-KILNVEEAMSLYRQIISN-- 362
           + Y + G+++ A      M   GC+ T+ +Y +LI G   + L  ++ ++    ++ N  
Sbjct: 678 EAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCS 737

Query: 363 -GVRQT--------------------VITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEP 401
            G + T                    V   N L+S L  AG+   A +L   M    + P
Sbjct: 738 FGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCP 797

Query: 402 DLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELF 461
           D   YN L+  L +   V  A+ +F  +     E  +  +  LI  LC+  R   A   F
Sbjct: 798 DQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITF 857

Query: 462 HKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTL 514
             +  +   P  V  +++I GL R G  +   +FL  ME     P+   +  L
Sbjct: 858 ENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETRRYMPSFHIYTIL 910



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 127/488 (26%), Positives = 200/488 (40%), Gaps = 39/488 (7%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
           N  +   C SG  N   A      M      P   S+  L     K    ++    + ++
Sbjct: 464 NTIIKGYCDSG--NTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEM 521

Query: 102 VSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLING 161
           V  GL P+ +T   LI+       G C + ++  AT L ++M   G RP+V TY  LI+G
Sbjct: 522 VDDGLCPNEVTYTALID-------GYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHG 574

Query: 162 FCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKG 221
             +  N S A  L K M+    E G+    N+ +Y+ +ID LCK G    A E+F +M  
Sbjct: 575 LTKQNNFSGAEELCKVMI----EEGIFP--NVVTYTAMIDGLCKNGSTSLALEMFNKMIE 628

Query: 222 RGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINE 281
           +G  P ++  ++LI      G  EE   LF E+   G  P+ +T+  MI+     GK+  
Sbjct: 629 QGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEH 688

Query: 282 ANGLLELMIQRGLNPDRFTYNSLMDGY--------------------CLVGRIDTAREIF 321
           A   L  MI+ G  P  +TY  L+ G                     C  G   T ++  
Sbjct: 689 AFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAV 748

Query: 322 LSMHSKGCKH----TVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSG 377
             M +K  +     +V   N L++         EA  L   +IS G+      YN+LL  
Sbjct: 749 SVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCS 808

Query: 378 LFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFG 437
           L +      A  +F  M     E  L+ Y  LI  LC+ +  +EA   F  + M  +   
Sbjct: 809 LLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPD 868

Query: 438 IEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLL 497
             +   LIDGL + G  D   E  H +  +  +P+   Y+I+     +K   +     + 
Sbjct: 869 DVVQAVLIDGLLRDGYKDLCMEFLHIMETRRYMPSFHIYTILAREASKKRSWKHVAGCIT 928

Query: 498 YMEKNGCA 505
            +++  C+
Sbjct: 929 KVKRATCS 936



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 56/247 (22%), Positives = 110/247 (44%), Gaps = 37/247 (14%)

Query: 349 VEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNI 408
           +   MS    +  +G+R  +  Y+ LL  L + G        +  M    V+P+L  YN 
Sbjct: 161 MARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNA 220

Query: 409 LIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKG 468
           +I+ LCK+  V +A  +   +  ++       +  +I G C+   LD+A ++F+++ ++G
Sbjct: 221 VINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEG 280

Query: 469 LVPTVVTYSIMIHGLCRKGKLEKANDFL-------------------------------- 496
             P  VTYS +I+GLC  G++ +A D +                                
Sbjct: 281 CEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAW 340

Query: 497 ---LYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
              + M+  GC PNV T+  L+ G   +      + L H+M+     + P+  T++ +++
Sbjct: 341 RLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRD--GVFPNTVTYNALIN 398

Query: 554 LLAKDEK 560
           +L ++ +
Sbjct: 399 ILVENRR 405



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 27/155 (17%), Positives = 73/155 (47%), Gaps = 2/155 (1%)

Query: 409 LIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKG 468
           LI        +   +    ML  +    G+  ++ L+  L + G      + +H++  +G
Sbjct: 151 LIKSCHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEG 210

Query: 469 LVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVV 528
           + P ++ Y+ +I+ LC+ G +  A   +  + ++  +P+  T+ +++ G  + +     +
Sbjct: 211 VQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSAL 270

Query: 529 ELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
           ++ ++MA  +    P+  T+S +++ L    + +E
Sbjct: 271 QVFNQMA--KEGCEPNTVTYSTLINGLCDSGRVNE 303


>gi|449449677|ref|XP_004142591.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Cucumis sativus]
          Length = 748

 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 163/565 (28%), Positives = 260/565 (46%), Gaps = 39/565 (6%)

Query: 30  QIAAVSSPETQLNEFLHE---NCKSGI-INLNEARYFFGYMTHMQPSPPISSFNLLFGAV 85
            IA VS+     +E +H+   N K  I + + +  +   Y        PI+ F++ F  +
Sbjct: 142 HIAVVSNDLRLAHELVHDYFLNSKLEIGVKMTQFTHRLIYTYKYWGPNPIA-FDIFFQVL 200

Query: 86  AKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERG------------------- 126
            +  H         KL+S GL+    + N  ++   N   G                   
Sbjct: 201 VEIGHLSEARKLLDKLLSYGLVVTVDSCNAFLSRIANNSEGIEMAIKVFCEYGISWNTTS 260

Query: 127 -------LCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMV 179
                  LC   ++KEA  L   M      PDV++Y T+I+G+C  G L  AL+L   M 
Sbjct: 261 YNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKALKLMDDMQ 320

Query: 180 SGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFC 239
                 GL  K N ++Y+ II  LCK G   +A+++  EM  + I P  VV TTLIHGF 
Sbjct: 321 I----KGL--KPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFF 374

Query: 240 CAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRF 299
             G+    N  F EML     P+ +T+  +I    +GGK+ E   L   MI RGL PD  
Sbjct: 375 KLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEV 434

Query: 300 TYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQI 359
           TY +L+D YC  G +  A  +   M   G    +V+Y  LI+G CK   ++ A  L  ++
Sbjct: 435 TYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEM 494

Query: 360 ISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCV 419
              G++  V  YN++++G+ +AG    A KL  EM++  ++PD  TY  +ID  C+   +
Sbjct: 495 RKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDI 554

Query: 420 QEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIM 479
            +A KL   +     +  +  FN L++G C  G L++   L   + +KG+VP  +TY+ +
Sbjct: 555 DKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTL 614

Query: 480 IHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPER 539
           +   C +  +         M   G AP+  T+N L+ G  +     +   L  +M   E+
Sbjct: 615 MKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMI--EK 672

Query: 540 NLVPDDTTFSIVVDLLAKDEKYHEC 564
             VP  T+++ ++    K +K  E 
Sbjct: 673 GYVPTVTSYNALIKRFYKKKKILEA 697



 Score =  209 bits (531), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 133/480 (27%), Positives = 230/480 (47%), Gaps = 15/480 (3%)

Query: 33  AVSSPETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYD 92
            +S   T  N  ++  C+ G   + EA      M     +P + S++ +           
Sbjct: 253 GISWNTTSYNIIIYSLCRLG--KVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELK 310

Query: 93  AVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDV 152
             +     +   GL P+  T N +I         LC   +  EA  + + M++  + PD 
Sbjct: 311 KALKLMDDMQIKGLKPNRYTYNSIILL-------LCKIGKSFEAEKVLREMMSQKIIPDN 363

Query: 153 ITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKA 212
           + Y TLI+GF + G++  A +   +M+S       I+      Y+ +I    + G V + 
Sbjct: 364 VVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYIT------YTTLIQGFGQGGKVIEP 417

Query: 213 KELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDC 272
           + LF EM  RG+ P  V  TTLI  +C AG       L  EM+ +G  PN++T+  +ID 
Sbjct: 418 QNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDG 477

Query: 273 LCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHT 332
           LCK G+++ AN LL+ M ++GL  +   YNS+++G C  G I+ A ++   M   G    
Sbjct: 478 LCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPD 537

Query: 333 VVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFD 392
            ++Y  +I+ YC++ ++++A  L ++++  G++ TV+T+N L++G    G      +L  
Sbjct: 538 AITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLG 597

Query: 393 EMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAG 452
            M    + PD  TYN L+   C  N +    K++  +           +N LI G CKA 
Sbjct: 598 WMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKAR 657

Query: 453 RLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFN 512
            L  AW L+ ++ +KG VPTV +Y+ +I    +K K+ +A +    M  +G   +   +N
Sbjct: 658 NLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKKKILEARELFEEMRGHGLVADGEIYN 717



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 118/389 (30%), Positives = 193/389 (49%), Gaps = 48/389 (12%)

Query: 58  EARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILI 117
           EA      M   +  P    +  L     K  H      ++ +++S  + PD++T   LI
Sbjct: 346 EAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLI 405

Query: 118 NCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKK 177
             FG          ++ E   LF  MI+ G++PD +TY TLI+ +C+ G +  A  LH +
Sbjct: 406 QGFGQG-------GKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNE 458

Query: 178 MVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHG 237
           MV    + G+    NI +Y  +ID LCK G +D A EL  EM+ +G+   V +  ++++G
Sbjct: 459 MV----QMGMTP--NIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNG 512

Query: 238 FCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPD 297
            C AGN E+   L  EM   G  P+ +T+  +ID  C+ G I++A+ LL+ M+ RGL P 
Sbjct: 513 ICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPT 572

Query: 298 RFTYNSLMDGYCLVGRID-----------------------------------TAREIFL 322
             T+N LM+G+C++G ++                                   T  +I+ 
Sbjct: 573 VVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYK 632

Query: 323 SMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAG 382
            M ++G      +YNILI G+CK  N++EA  LY+++I  G   TV +YN L+   ++  
Sbjct: 633 RMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKK 692

Query: 383 QAGYAQKLFDEMKLYNVEPDLSTYNILID 411
           +   A++LF+EM+ + +  D   YN  +D
Sbjct: 693 KILEARELFEEMRGHGLVADGEIYNFFVD 721



 Score =  191 bits (486), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 134/446 (30%), Positives = 216/446 (48%), Gaps = 22/446 (4%)

Query: 51  SGIINLNEARYFFGYMTHMQPS---PPISSFN---LLFGAVAKNRHYDAVISFYRKLVSI 104
            G  +L E +     M  MQ     P   ++N   LL   + K+   + V+   R+++S 
Sbjct: 301 DGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVL---REMMSQ 357

Query: 105 GLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCR 164
            ++PD +    LI+       G      ++ A   F  M++  + PD ITY TLI GF +
Sbjct: 358 KIIPDNVVYTTLIH-------GFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQ 410

Query: 165 TGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGI 224
            G +     L  +M+S     GL  K +  +Y+ +ID  CK G +  A  L  EM   G+
Sbjct: 411 GGKVIEPQNLFHEMIS----RGL--KPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGM 464

Query: 225 NPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANG 284
            P +V    LI G C  G  +  N L  EM   G + N+  +N M++ +CK G I +A  
Sbjct: 465 TPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIK 524

Query: 285 LLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYC 344
           L++ M   G++PD  TY +++D YC +G ID A ++   M  +G + TVV++N+L+NG+C
Sbjct: 525 LMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFC 584

Query: 345 KILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLS 404
            +  +E+   L   ++  G+    ITYNTL+             K++  M+   V PD +
Sbjct: 585 MLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSN 644

Query: 405 TYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKL 464
           TYNILI G CK   ++EA  L+  +    +   +  +N LI    K  ++  A ELF ++
Sbjct: 645 TYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKKKILEARELFEEM 704

Query: 465 PQKGLVPTVVTYSIMIHGLCRKGKLE 490
              GLV     Y+  +     +G +E
Sbjct: 705 RGHGLVADGEIYNFFVDMCYEEGDVE 730



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 61/250 (24%), Positives = 108/250 (43%), Gaps = 15/250 (6%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CK+G  N+ +A      M      P   ++  +  A  +    D      ++++  GL P
Sbjct: 514 CKAG--NIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQP 571

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
             +T N+L+N       G C+   +++   L   M+  G+ PD ITY TL+   C   ++
Sbjct: 572 TVVTFNVLMN-------GFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSM 624

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
           +   +++K+M +     G+   +N  +Y+I+I   CK   + +A  L+ EM  +G  P V
Sbjct: 625 NTTTKIYKRMRN----QGVAPDSN--TYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTV 678

Query: 229 VVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLEL 288
                LI  F       E   LF EM   G   +   +N  +D   + G +     L + 
Sbjct: 679 TSYNALIKRFYKKKKILEARELFEEMRGHGLVADGEIYNFFVDMCYEEGDVEITLNLCDE 738

Query: 289 MIQRGLNPDR 298
            I++ L  +R
Sbjct: 739 AIEKCLLNER 748


>gi|357149641|ref|XP_003575182.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 557

 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 127/425 (29%), Positives = 217/425 (51%), Gaps = 18/425 (4%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVS-IGLLPDFLTLNILINCFGNKERGLCVEN 131
           P + ++N +          DA     R+LV+ + + PD  T N LI       RGLC   
Sbjct: 122 PDVMAYNAMVAGYCVTGQLDAA----RRLVADMPMEPDSYTYNTLI-------RGLCGRG 170

Query: 132 RIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKT 191
           R   A  +  +M+  G  PDV+TY  L+   C+      A++L  +M +           
Sbjct: 171 RTGNALVVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRAKG------CAP 224

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
           +I +Y+++++ +C+EG VD A E    +   G  P  V    ++ G C A  WE+   L 
Sbjct: 225 DIITYNVVVNGICQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWEDAEKLM 284

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
            EM   G  PN++TFN++I  LC+ G +  A  +L+ + + G  P+  +YN ++  +C  
Sbjct: 285 AEMSQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPILHAFCKQ 344

Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
            ++D A      M S+GC   +VSYN L+   C+   V+ A+ L  Q+   G    +I+Y
Sbjct: 345 KKMDRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISY 404

Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
           NT++ GL +AG+   A +L +EM    ++PD+ TY+ +  GLC+ + ++EA++ F  ++ 
Sbjct: 405 NTVIDGLTKAGKTKEALELLNEMVTKGLQPDIITYSTISSGLCREDRIEEAIRAFCKVQD 464

Query: 432 NKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEK 491
                   ++N ++ GLCK     NA +LF  +   G +P   TY+I+I GL  +G +++
Sbjct: 465 MGIRPNTVLYNAILLGLCKRRETHNAIDLFIYMISNGCMPNESTYTILIEGLTYEGLVKE 524

Query: 492 ANDFL 496
           A + L
Sbjct: 525 ARELL 529



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 130/481 (27%), Positives = 231/481 (48%), Gaps = 23/481 (4%)

Query: 55  NLNEARYFFGYMTHMQPSP-PISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTL 113
           +L EA      M+ ++PS  P     L+    A  R  +A      + V     PD +  
Sbjct: 74  DLEEALRLVESMSGLEPSAAPGPCAALIKKLCASGRTAEA------RRVLAACEPDVMAY 127

Query: 114 NILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALR 173
           N ++        G CV  ++  A  L  +M    + PD  TY TLI G C  G    AL 
Sbjct: 128 NAMVA-------GYCVTGQLDAARRLVADM---PMEPDSYTYNTLIRGLCGRGRTGNALV 177

Query: 174 LHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTT 233
           +   M+      G +   ++ +Y+I++++ CK     +A +L  EM+ +G  P ++    
Sbjct: 178 VLDDML----RRGCVP--DVVTYTILLEATCKRSGYKQAMKLLDEMRAKGCAPDIITYNV 231

Query: 234 LIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRG 293
           +++G C  G  ++       +   G  PN +++N+++  LC   +  +A  L+  M Q+G
Sbjct: 232 VVNGICQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSQKG 291

Query: 294 LNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAM 353
             P+  T+N L+   C  G ++ A E+   +   GC    +SYN +++ +CK   ++ AM
Sbjct: 292 YPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAM 351

Query: 354 SLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGL 413
           +    ++S G    +++YNTLL+ L + G+   A +L  ++K     P L +YN +IDGL
Sbjct: 352 AFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGL 411

Query: 414 CKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTV 473
            K    +EA++L + +     +  I  ++ +  GLC+  R++ A   F K+   G+ P  
Sbjct: 412 TKAGKTKEALELLNEMVTKGLQPDIITYSTISSGLCREDRIEEAIRAFCKVQDMGIRPNT 471

Query: 474 VTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHK 533
           V Y+ ++ GLC++ +   A D  +YM  NGC PN  T+  L+ G        +  ELL +
Sbjct: 472 VLYNAILLGLCKRRETHNAIDLFIYMISNGCMPNESTYTILIEGLTYEGLVKEARELLGE 531

Query: 534 M 534
           +
Sbjct: 532 L 532



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 133/458 (29%), Positives = 219/458 (47%), Gaps = 23/458 (5%)

Query: 16  VSKVKLSSLFKSPRQIAAVSSPET-QLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPP 74
           + K+  S      R++ A   P+    N  +   C +G   L+ AR     M    P  P
Sbjct: 101 IKKLCASGRTAEARRVLAACEPDVMAYNAMVAGYCVTG--QLDAARRLVADM----PMEP 154

Query: 75  IS-SFN-LLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
            S ++N L+ G   + R  +A++     ++  G +PD +T  IL+          C  + 
Sbjct: 155 DSYTYNTLIRGLCGRGRTGNALVVL-DDMLRRGCVPDVVTYTILLE-------ATCKRSG 206

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
            K+A  L   M A G  PD+ITY  ++NG C+ G +  A+   K + S   E       N
Sbjct: 207 YKQAMKLLDEMRAKGCAPDIITYNVVVNGICQEGRVDDAIEFLKSLPSHGCE------PN 260

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
             SY+I++  LC     + A++L  EM  +G  P VV    LI   C  G  E    +  
Sbjct: 261 TVSYNIVLKGLCTAERWEDAEKLMAEMSQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLD 320

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
           ++   G  PN L++N ++   CK  K++ A   +ELM+ RG  PD  +YN+L+   C  G
Sbjct: 321 QIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSRGCYPDIVSYNTLLTALCRGG 380

Query: 313 RIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYN 372
            +D A E+   +  KGC   ++SYN +I+G  K    +EA+ L  ++++ G++  +ITY+
Sbjct: 381 EVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTKEALELLNEMVTKGLQPDIITYS 440

Query: 373 TLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMN 432
           T+ SGL +  +   A + F +++   + P+   YN ++ GLCK      A+ LF  +  N
Sbjct: 441 TISSGLCREDRIEEAIRAFCKVQDMGIRPNTVLYNAILLGLCKRRETHNAIDLFIYMISN 500

Query: 433 KFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLV 470
                   +  LI+GL   G +  A EL  +L  +G+V
Sbjct: 501 GCMPNESTYTILIEGLTYEGLVKEARELLGELCSRGVV 538



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 130/471 (27%), Positives = 221/471 (46%), Gaps = 55/471 (11%)

Query: 122 NKERGLCVENRIKEATWLFKNMIAFGVRPDVIT--YGTLINGFCRTGNLSVALRLHKKMV 179
           ++ RGL     ++EA  L ++M   G+ P         LI   C +G  + A R+     
Sbjct: 64  DRLRGLVRRGDLEEALRLVESM--SGLEPSAAPGPCAALIKKLCASGRTAEARRVLAA-- 119

Query: 180 SGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFC 239
                     + ++ +Y+ ++   C  G +D A+ L  +M    + P      TLI G C
Sbjct: 120 ---------CEPDVMAYNAMVAGYCVTGQLDAARRLVADMP---MEPDSYTYNTLIRGLC 167

Query: 240 CAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRF 299
             G       +  +ML  G  P+++T+ ++++  CK     +A  LL+ M  +G  PD  
Sbjct: 168 GRGRTGNALVVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRAKGCAPDII 227

Query: 300 TYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQI 359
           TYN +++G C  GR+D A E   S+ S GC+   VSYNI++ G C     E+A  L  ++
Sbjct: 228 TYNVVVNGICQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEM 287

Query: 360 ISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYN--------------------- 398
              G    V+T+N L+S L + G    A ++ D++  Y                      
Sbjct: 288 SQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPILHAFCKQKKM 347

Query: 399 ------VE--------PDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCL 444
                 VE        PD+ +YN L+  LC+   V  AV+L H L+       +  +N +
Sbjct: 348 DRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTV 407

Query: 445 IDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGC 504
           IDGL KAG+   A EL +++  KGL P ++TYS +  GLCR+ ++E+A      ++  G 
Sbjct: 408 IDGLTKAGKTKEALELLNEMVTKGLQPDIITYSTISSGLCREDRIEEAIRAFCKVQDMGI 467

Query: 505 APNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLL 555
            PN V +N ++ G  +  +T   ++L   M       +P+++T++I+++ L
Sbjct: 468 RPNTVLYNAILLGLCKRRETHNAIDLFIYMI--SNGCMPNESTYTILIEGL 516


>gi|356522596|ref|XP_003529932.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Glycine max]
          Length = 827

 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 143/499 (28%), Positives = 248/499 (49%), Gaps = 16/499 (3%)

Query: 55  NLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLN 114
           ++N A   F  +  +  +P ++ F++L    +K  + +     Y ++  +GL P    LN
Sbjct: 342 DVNSALRLFDEVVEVGVTPNVAIFSVLIEWCSKIGNVEKANELYTRMKCMGLQPTVFILN 401

Query: 115 ILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRL 174
            L+       +G   +N ++ A  L    +  G+   V+TY  ++   C  G ++ A  L
Sbjct: 402 FLL-------KGFRKQNLLENAYLLLDGAVENGI-ASVVTYNIVLLWLCELGKVNEACNL 453

Query: 175 HKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTL 234
             KM+       L+S      Y+ +I   CK+G +D A E+   +   G+ P  +  T L
Sbjct: 454 WDKMIGKGITPSLVS------YNHMILGHCKKGCMDDAHEVMNGIIESGLKPNAITYTIL 507

Query: 235 IHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGL 294
           + G    G+ E    +F +M+  G  P   TFN +I+ LCK G+++EA   L   I++  
Sbjct: 508 MEGSFKKGDCEHAFNMFDQMVAAGIVPTDYTFNSIINGLCKVGRVSEARDKLNTFIKQSF 567

Query: 295 NPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMS 354
            P   TYN ++DGY   G ID+A  ++  M        V++Y  LING+CK   ++ A+ 
Sbjct: 568 IPTSMTYNCIIDGYVKEGAIDSAESVYREMCRSEISPNVITYTSLINGFCKSNKMDLALK 627

Query: 355 LYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLC 414
           ++  +   G+   +  Y TL++G  +      A K F ++    + P+   YNI+I    
Sbjct: 628 MHDDMKRKGLELDITVYATLIAGFCKMQDMENACKFFSKLLEVGLTPNTIVYNIMISAYR 687

Query: 415 KNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVV 474
             N ++ A+ L   +  NK    ++I+  LIDGL K G+L  A +L+ ++  +G+VP + 
Sbjct: 688 NLNNMEAALNLHKEMINNKIPCDLKIYTSLIDGLLKEGKLSFALDLYSEMLCRGIVPDIF 747

Query: 475 TYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKM 534
            Y+++I+GLC  G+LE A   L  M+ N   P V+ +NTL+ G  +     +   L  +M
Sbjct: 748 MYNVLINGLCNHGQLENAGKILKEMDGNNITPTVLLYNTLIAGHFKEGNLQEAFRLHDEM 807

Query: 535 AEPERNLVPDDTTFSIVVD 553
              ++ LVPDDTT+ I+V+
Sbjct: 808 L--DKGLVPDDTTYDILVN 824



 Score =  122 bits (305), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 97/410 (23%), Positives = 181/410 (44%), Gaps = 38/410 (9%)

Query: 188 ISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEV 247
           +S + +F+Y +I  S  +   + +A E F  M   G+ P V     L+         E+ 
Sbjct: 149 LSDSRVFNYLLI--SYVRANKITEAVECFRAMLEDGVVPWVPFVNVLLTAMIRRNMVEDA 206

Query: 248 NGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDG 307
           + LF EM +     +  T  V++    KGGK  EA         RGL  D  +Y+ ++  
Sbjct: 207 HRLFDEMAERRIYGDCYTLQVLMRACLKGGKFVEAERYFGQAAGRGLKLDAASYSIVIQA 266

Query: 308 YCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQT 367
            C    +D A ++       G   +  +Y  +I    ++ N  EA+ L  +++ + V   
Sbjct: 267 VCRGSDLDLASKLVEGDEELGWVPSEGTYAAVIGACVRLGNFGEALRLKDEMVDSRVPVN 326

Query: 368 VITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFH 427
           V    +L+ G    G    A +LFDE+    V P+++ +++LI+   K   V++A +L+ 
Sbjct: 327 VAVATSLIKGYCVRGDVNSALRLFDEVVEVGVTPNVAIFSVLIEWCSKIGNVEKANELYT 386

Query: 428 MLEMNKFEFGIEIFNCLIDG----------------------------------LCKAGR 453
            ++    +  + I N L+ G                                  LC+ G+
Sbjct: 387 RMKCMGLQPTVFILNFLLKGFRKQNLLENAYLLLDGAVENGIASVVTYNIVLLWLCELGK 446

Query: 454 LDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNT 513
           ++ A  L+ K+  KG+ P++V+Y+ MI G C+KG ++ A++ +  + ++G  PN +T+  
Sbjct: 447 VNEACNLWDKMIGKGITPSLVSYNHMILGHCKKGCMDDAHEVMNGIIESGLKPNAITYTI 506

Query: 514 LMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
           LM G  +         +  +M      +VP D TF+ +++ L K  +  E
Sbjct: 507 LMEGSFKKGDCEHAFNMFDQMVAA--GIVPTDYTFNSIINGLCKVGRVSE 554


>gi|242061532|ref|XP_002452055.1| hypothetical protein SORBIDRAFT_04g017800 [Sorghum bicolor]
 gi|241931886|gb|EES05031.1| hypothetical protein SORBIDRAFT_04g017800 [Sorghum bicolor]
          Length = 810

 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 144/530 (27%), Positives = 267/530 (50%), Gaps = 32/530 (6%)

Query: 44  FLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVS 103
            +H  C++G+ +   A      M+  + +  +  +N +   +A+    +  +  + ++  
Sbjct: 244 IIHSLCQNGLAD--RAMGVLDQMSKCRCTRGVIVYNEIISCLAELGRVEEALHLFDQMPC 301

Query: 104 IGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFC 163
               PD  + N ++       +GLC + R ++A  L   M+     PD +T+ T+I+  C
Sbjct: 302 K---PDIFSYNTVM-------KGLCRDGRWEDAGTLIAGMVRKDCPPDEVTFNTVISYLC 351

Query: 164 RTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRG 223
             G +  A+ + ++M           K + F+YS ++++L + G VD A EL   +  + 
Sbjct: 352 HRGLVDCAMEVVEQMPK------YGCKPDNFTYSALVNALSERGCVDDALELLRTIPWK- 404

Query: 224 INPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEAN 283
             P  V   +++ G C A  W++V  L  EM+      + +TF ++IDCLC+ G ++   
Sbjct: 405 --PNTVCYRSVLKGLCRADRWDDVGKLVAEMIRNQLNLDEVTFGLIIDCLCQKGLVDYGA 462

Query: 284 GLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGY 343
            +L  M + G +PD   YNSL++G+   G +D A E+F +M    CK  VV+YN ++ G 
Sbjct: 463 EVLREMTKFGCSPDIIIYNSLINGFSENGSVDDALELFKNM---SCKRNVVTYNYMLKGL 519

Query: 344 CKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDL 403
           C+    E+A  L  +++ +      +T++TL+S L Q G    A ++F++M  YN  P++
Sbjct: 520 CRAEQWEDAGKLVAEMVKDECLPNEVTFSTLISYLCQKGFVECAIEVFEKMPKYNCMPNV 579

Query: 404 STYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHK 463
             Y+ LI+GL    CV +A+KL + +           ++  + GLC+A R ++A EL  +
Sbjct: 580 IIYSTLINGLSDQECVDDALKLLNDMPCKPDTI---CYSAALKGLCRAERWEDAGELILE 636

Query: 464 LPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNK 523
           + +K  +P  VT+SI+I+ LC KG LE A +    M K  C PNV  +++L++GF +  +
Sbjct: 637 MIRKNCLPDEVTFSILINNLCHKGFLESATEVSELMLKYECMPNVFIYSSLINGFAEQYR 696

Query: 524 TSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKSSYR 573
               ++LL  M        PD   +S  +  L + +++ +   +    +R
Sbjct: 697 AEDALQLLRNMP-----CEPDTICYSAALKGLCRAKRWEDARELIAEMFR 741



 Score =  188 bits (478), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 134/494 (27%), Positives = 239/494 (48%), Gaps = 34/494 (6%)

Query: 72  SPPISSFN-LLFGAVAKNRHYDAVISFYRKLVS-IGLLPDFLTLNILINCFGNKERGLCV 129
           S  + ++N L+ G   + R  DA     R+LV+ +   P+  T + L+       +GLC 
Sbjct: 168 SADVVTYNTLVAGYCREGRLNDA-----RRLVADMPFAPNSYTNSTLL-------KGLCS 215

Query: 130 ENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLIS 189
                +A  L   MI  G  P+ +T+G +I+  C+ G    A+ +  +M       G+I 
Sbjct: 216 NKEWDDAEELLSEMIRSGCPPNDLTFGMIIHSLCQNGLADRAMGVLDQMSKCRCTRGVI- 274

Query: 190 KTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNG 249
                 Y+ II  L + G V++A  LF +M  +   P +    T++ G C  G WE+   
Sbjct: 275 -----VYNEIISCLAELGRVEEALHLFDQMPCK---PDIFSYNTVMKGLCRDGRWEDAGT 326

Query: 250 LFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYC 309
           L   M+     P+ +TFN +I  LC  G ++ A  ++E M + G  PD FTY++L++   
Sbjct: 327 LIAGMVRKDCPPDEVTFNTVISYLCHRGLVDCAMEVVEQMPKYGCKPDNFTYSALVNALS 386

Query: 310 LVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVI 369
             G +D A E+  ++     K   V Y  ++ G C+    ++   L  ++I N +    +
Sbjct: 387 ERGCVDDALELLRTIPW---KPNTVCYRSVLKGLCRADRWDDVGKLVAEMIRNQLNLDEV 443

Query: 370 TYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHML 429
           T+  ++  L Q G   Y  ++  EM  +   PD+  YN LI+G  +N  V +A++LF  +
Sbjct: 444 TFGLIIDCLCQKGLVDYGAEVLREMTKFGCSPDIIIYNSLINGFSENGSVDDALELFKNM 503

Query: 430 EMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKL 489
              +    +  +N ++ GLC+A + ++A +L  ++ +   +P  VT+S +I  LC+KG +
Sbjct: 504 SCKR---NVVTYNYMLKGLCRAEQWEDAGKLVAEMVKDECLPNEVTFSTLISYLCQKGFV 560

Query: 490 EKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFS 549
           E A +    M K  C PNV+ ++TL++G          ++LL+ M        PD   +S
Sbjct: 561 ECAIEVFEKMPKYNCMPNVIIYSTLINGLSDQECVDDALKLLNDMP-----CKPDTICYS 615

Query: 550 IVVDLLAKDEKYHE 563
             +  L + E++ +
Sbjct: 616 AALKGLCRAERWED 629



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 118/440 (26%), Positives = 221/440 (50%), Gaps = 23/440 (5%)

Query: 125 RGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTG-NLSVALRLHKKMVSGDY 183
           + LC   R+ +A  +       G   D +T  TL+ G+CR G  L+ A R+   +     
Sbjct: 110 KKLCAAGRLDDAERVLGASERAGT-ADAVTRNTLVAGYCRAGGRLADAERMLASL----- 163

Query: 184 ENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGN 243
              L    ++ +Y+ ++   C+EG ++ A+ L  +M      P     +TL+ G C    
Sbjct: 164 --ALSGSADVVTYNTLVAGYCREGRLNDARRLVADMP---FAPNSYTNSTLLKGLCSNKE 218

Query: 244 WEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNS 303
           W++   L  EM+  G  PN LTF ++I  LC+ G  + A G+L+ M +         YN 
Sbjct: 219 WDDAEELLSEMIRSGCPPNDLTFGMIIHSLCQNGLADRAMGVLDQMSKCRCTRGVIVYNE 278

Query: 304 LMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNG 363
           ++     +GR++ A  +F  M    CK  + SYN ++ G C+    E+A +L   ++   
Sbjct: 279 IISCLAELGRVEEALHLFDQMP---CKPDIFSYNTVMKGLCRDGRWEDAGTLIAGMVRKD 335

Query: 364 VRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAV 423
                +T+NT++S L   G    A ++ ++M  Y  +PD  TY+ L++ L +  CV +A+
Sbjct: 336 CPPDEVTFNTVISYLCHRGLVDCAMEVVEQMPKYGCKPDNFTYSALVNALSERGCVDDAL 395

Query: 424 KLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGL 483
           +L   +    ++     +  ++ GLC+A R D+  +L  ++ +  L    VT+ ++I  L
Sbjct: 396 ELLRTI---PWKPNTVCYRSVLKGLCRADRWDDVGKLVAEMIRNQLNLDEVTFGLIIDCL 452

Query: 484 CRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVP 543
           C+KG ++   + L  M K GC+P+++ +N+L++GF +N      +EL   M+  +RN+V 
Sbjct: 453 CQKGLVDYGAEVLREMTKFGCSPDIIIYNSLINGFSENGSVDDALELFKNMS-CKRNVV- 510

Query: 544 DDTTFSIVVDLLAKDEKYHE 563
              T++ ++  L + E++ +
Sbjct: 511 ---TYNYMLKGLCRAEQWED 527



 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 129/514 (25%), Positives = 238/514 (46%), Gaps = 45/514 (8%)

Query: 48  NCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLL 107
           +C + +  + EA + F     M   P I S+N +   + ++  ++   +    +V     
Sbjct: 281 SCLAELGRVEEALHLF---DQMPCKPDIFSYNTVMKGLCRDGRWEDAGTLIAGMVRKDCP 337

Query: 108 PDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGN 167
           PD +T N +I+        LC    +  A  + + M  +G +PD  TY  L+N     G 
Sbjct: 338 PDEVTFNTVIS-------YLCHRGLVDCAMEVVEQMPKYGCKPDNFTYSALVNALSERGC 390

Query: 168 LSVALRL------------HKKMVSG-------DYENGLISKT-------NIFSYSIIID 201
           +  AL L            ++ ++ G       D    L+++        +  ++ +IID
Sbjct: 391 VDDALELLRTIPWKPNTVCYRSVLKGLCRADRWDDVGKLVAEMIRNQLNLDEVTFGLIID 450

Query: 202 SLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRP 261
            LC++GLVD   E+  EM   G +P +++  +LI+GF   G+ ++   LF  M     + 
Sbjct: 451 CLCQKGLVDYGAEVLREMTKFGCSPDIIIYNSLINGFSENGSVDDALELFKNM---SCKR 507

Query: 262 NLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIF 321
           N++T+N M+  LC+  +  +A  L+  M++    P+  T+++L+   C  G ++ A E+F
Sbjct: 508 NVVTYNYMLKGLCRAEQWEDAGKLVAEMVKDECLPNEVTFSTLISYLCQKGFVECAIEVF 567

Query: 322 LSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQA 381
             M    C   V+ Y+ LING      V++A+ L   +     +   I Y+  L GL +A
Sbjct: 568 EKMPKYNCMPNVIIYSTLINGLSDQECVDDALKLLNDM---PCKPDTICYSAALKGLCRA 624

Query: 382 GQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIF 441
            +   A +L  EM   N  PD  T++ILI+ LC    ++ A ++  ++   +    + I+
Sbjct: 625 ERWEDAGELILEMIRKNCLPDEVTFSILINNLCHKGFLESATEVSELMLKYECMPNVFIY 684

Query: 442 NCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEK 501
           + LI+G  +  R ++A +L   +P +   P  + YS  + GLCR  + E A + +  M +
Sbjct: 685 SSLINGFAEQYRAEDALQLLRNMPCE---PDTICYSAALKGLCRAKRWEDARELIAEMFR 741

Query: 502 NGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMA 535
             C  +  TF+ L+    QN       E+  +M+
Sbjct: 742 KQCPLDEATFSMLIGSLCQNGLVDMATEVFEQMS 775



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 86/308 (27%), Positives = 156/308 (50%), Gaps = 13/308 (4%)

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
           +E +    RP  +   ++I  LC  G++++A  +L    +R    D  T N+L+ GYC  
Sbjct: 91  VESMRDPERPAAVPCTLLIKKLCAAGRLDDAERVLGAS-ERAGTADAVTRNTLVAGYCRA 149

Query: 312 -GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISN-GVRQTVI 369
            GR+  A  +  S+   G    VV+YN L+ GYC+   + +A    R+++++        
Sbjct: 150 GGRLADAERMLASLALSG-SADVVTYNTLVAGYCREGRLNDA----RRLVADMPFAPNSY 204

Query: 370 TYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHML 429
           T +TLL GL    +   A++L  EM      P+  T+ ++I  LC+N     A+ +   +
Sbjct: 205 TNSTLLKGLCSNKEWDDAEELLSEMIRSGCPPNDLTFGMIIHSLCQNGLADRAMGVLDQM 264

Query: 430 EMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKL 489
              +   G+ ++N +I  L + GR++ A  LF ++P K   P + +Y+ ++ GLCR G+ 
Sbjct: 265 SKCRCTRGVIVYNEIISCLAELGRVEEALHLFDQMPCK---PDIFSYNTVMKGLCRDGRW 321

Query: 490 EKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFS 549
           E A   +  M +  C P+ VTFNT++            +E++ +M  P+    PD+ T+S
Sbjct: 322 EDAGTLIAGMVRKDCPPDEVTFNTVISYLCHRGLVDCAMEVVEQM--PKYGCKPDNFTYS 379

Query: 550 IVVDLLAK 557
            +V+ L++
Sbjct: 380 ALVNALSE 387



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 90/366 (24%), Positives = 167/366 (45%), Gaps = 45/366 (12%)

Query: 226 PAVVVCTTLIHGFCCAGNWEEVNGLF---------------------------------- 251
           PA V CT LI   C AG  ++   +                                   
Sbjct: 100 PAAVPCTLLIKKLCAAGRLDDAERVLGASERAGTADAVTRNTLVAGYCRAGGRLADAERM 159

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
           +  L L    +++T+N ++   C+ G++N+A  L+  M      P+ +T ++L+ G C  
Sbjct: 160 LASLALSGSADVVTYNTLVAGYCREGRLNDARRLVADM---PFAPNSYTNSTLLKGLCSN 216

Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
              D A E+   M   GC    +++ ++I+  C+    + AM +  Q+      + VI Y
Sbjct: 217 KEWDDAEELLSEMIRSGCPPNDLTFGMIIHSLCQNGLADRAMGVLDQMSKCRCTRGVIVY 276

Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
           N ++S L + G+   A  LFD+M     +PD+ +YN ++ GLC++   ++A  L   +  
Sbjct: 277 NEIISCLAELGRVEEALHLFDQMP---CKPDIFSYNTVMKGLCRDGRWEDAGTLIAGMVR 333

Query: 432 NKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEK 491
                    FN +I  LC  G +D A E+  ++P+ G  P   TYS +++ L  +G ++ 
Sbjct: 334 KDCPPDEVTFNTVISYLCHRGLVDCAMEVVEQMPKYGCKPDNFTYSALVNALSERGCVDD 393

Query: 492 ANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIV 551
           A + L  +      PN V + +++ G  + ++   V +L+ +M   + NL  D+ TF ++
Sbjct: 394 ALELLRTIPWK---PNTVCYRSVLKGLCRADRWDDVGKLVAEMIRNQLNL--DEVTFGLI 448

Query: 552 VDLLAK 557
           +D L +
Sbjct: 449 IDCLCQ 454



 Score = 49.7 bits (117), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 35/121 (28%), Positives = 60/121 (49%), Gaps = 8/121 (6%)

Query: 444 LIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRK-GKLEKANDFLLYMEKN 502
           LI  LC AGRLD+A  +     + G     VT + ++ G CR  G+L  A   L  +  +
Sbjct: 108 LIKKLCAAGRLDDAERVLGASERAGTA-DAVTRNTLVAGYCRAGGRLADAERMLASLALS 166

Query: 503 GCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYH 562
           G A +VVT+NTL+ G+ +  + +    L+  M        P+  T S ++  L  ++++ 
Sbjct: 167 GSA-DVVTYNTLVAGYCREGRLNDARRLVADMP-----FAPNSYTNSTLLKGLCSNKEWD 220

Query: 563 E 563
           +
Sbjct: 221 D 221


>gi|50508175|dbj|BAD30981.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|50508218|dbj|BAD31653.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
          Length = 918

 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 145/482 (30%), Positives = 241/482 (50%), Gaps = 17/482 (3%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
           P +  +N +  A+ K+ +     +  +K+    + PD  T   +I        G C ++ 
Sbjct: 213 PNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMI-------LGHCRKHD 265

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
           +  A  +F  M   G  P+ +TY TLING C +G ++ A  L ++M+     +G++   +
Sbjct: 266 LDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMIL----HGILPTAH 321

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
             +  II  +LC  G  + A  LF++MK +G  P V   T LI G C +G  +   GLF 
Sbjct: 322 TCTGPII--ALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFH 379

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
            M   G  PN +T+N +I+ L +  +I  A  +L LM + G +P+  TYN ++ GYC++G
Sbjct: 380 RMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILG 439

Query: 313 RIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYN 372
               A  +  +M  +G    +V+YN +I GYC   N   A+ +   +   G +    +Y 
Sbjct: 440 DPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYT 499

Query: 373 TLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMN 432
            L+ G  +  +   A  LF+EM    + P+  TY  LIDG CK+  +  A  L   ++ +
Sbjct: 500 ELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRS 559

Query: 433 KFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKA 492
                ++ +N LI GL K      A EL   + ++G+ P VVTY+ MI GLC+ G    A
Sbjct: 560 GCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLA 619

Query: 493 NDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERN-LVPDDTTFSIV 551
            +    M + GC PN++T+++L+    Q  K  +   L    AE ER+ L+PD+ T+  +
Sbjct: 620 LEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLF---AELERHGLIPDEITYVKM 676

Query: 552 VD 553
           ++
Sbjct: 677 IE 678



 Score =  215 bits (548), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 133/453 (29%), Positives = 222/453 (49%), Gaps = 31/453 (6%)

Query: 140 FKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKT-------- 191
           +  M++ GV+P+++ Y  +IN  C+ GN++ A  + KK+   +      + T        
Sbjct: 203 YHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCR 262

Query: 192 ---------------------NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVV 230
                                N  +YS +I+ LC  G V++A +L  EM   GI P    
Sbjct: 263 KHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHT 322

Query: 231 CTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMI 290
           CT  I   C  G +E+   LF++M + G  PN+ T+  +I  LC  G +  A GL   M 
Sbjct: 323 CTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMS 382

Query: 291 QRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVE 350
           + G+ P+  TYN+L++      RI  A  +   M   GC   +V+YN +I GYC + + +
Sbjct: 383 RDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPK 442

Query: 351 EAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILI 410
           +AM +   ++  G    ++TYNT++ G   +G    A ++ D M+    +PD  +Y  LI
Sbjct: 443 KAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELI 502

Query: 411 DGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLV 470
            G CK + ++ A  LF+ +  +        +  LIDG CK  +LD A  L   + + G  
Sbjct: 503 CGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCR 562

Query: 471 PTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVEL 530
           P V TY+++IHGL ++     A +    M + G  PNVVT+  ++ G  +N  TS  +E+
Sbjct: 563 PNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEM 622

Query: 531 LHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
            +KM   E+  +P+  T+S ++  L ++ K  E
Sbjct: 623 FNKMI--EQGCLPNLLTYSSLIRALGQEGKVEE 653



 Score =  179 bits (453), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 145/536 (27%), Positives = 241/536 (44%), Gaps = 45/536 (8%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           C SG++ +  A   F  M+     P   ++N L   + +NR           +   G  P
Sbjct: 366 CVSGLLKV--AIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSP 423

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           + +T N +I       +G C+    K+A  +  NM+  G   +++TY T+I G+C +GN 
Sbjct: 424 NIVTYNEMI-------KGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNT 476

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
           + ALR+   M  G        K + +SY+ +I   CK   ++ A  LF EM   G+ P  
Sbjct: 477 TSALRILDLMRDGG------CKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNE 530

Query: 229 VVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLEL 288
           V  T LI G+C     +    L   M   G RPN+ T+NV+I  L K    + A  L ++
Sbjct: 531 VTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKV 590

Query: 289 MIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILN 348
           MI+ G+ P+  TY +++DG C  G    A E+F  M  +GC   +++Y+ LI    +   
Sbjct: 591 MIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGK 650

Query: 349 VEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNI 408
           VEEA +L+ ++  +G+    ITY  ++     +G+  +A      M     +P L TY +
Sbjct: 651 VEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGV 710

Query: 409 LIDGLCKN-----------------NCV-------QEAVKLFHMLEMNKFEFG--IEIFN 442
           LI GL KN                 NC        Q+AV +    ++ + + G  +++ N
Sbjct: 711 LIKGL-KNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSA-KLAELDPGLSVQVQN 768

Query: 443 CLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKN 502
            L+  L  AGR   A EL   +  +GL P    Y+ ++  L R   ++ A     +M   
Sbjct: 769 ALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQ 828

Query: 503 GCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKD 558
           GC  ++  +  L+    Q ++  +       M    R   PDD   ++++D L +D
Sbjct: 829 GCEVHLNGYKELICALCQLHRRKEARITFENML--MRTWNPDDVVQAVLIDGLLRD 882



 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 110/393 (27%), Positives = 193/393 (49%), Gaps = 34/393 (8%)

Query: 216 FLEMKGR-GINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLC 274
           FL+M  + G+   +   + L+      G    V   +  ML  G +PNLL +N +I+ LC
Sbjct: 167 FLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALC 226

Query: 275 KGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVV 334
           K G + +A  +++ + +  ++PD FTY S++ G+C    +D+A ++F  M  +GC+   V
Sbjct: 227 KDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTV 286

Query: 335 SYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEM 394
           +Y+ LING C    V EA  L R++I +G+  T  T    +  L   G    A +LF +M
Sbjct: 287 TYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDM 346

Query: 395 KLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRL 454
           K    EP++ TY  LI GLC +  ++ A+ LFH +  +        +N LI+ L +  R+
Sbjct: 347 KNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRI 406

Query: 455 DNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTL 514
             A+ + + + + G  P +VTY+ MI G C  G  +KA   +  M + G + N+VT+NT+
Sbjct: 407 KYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTI 466

Query: 515 MHGFLQNNKTSKVVELLHKMAE----PER-----------------------------NL 541
           + G+  +  T+  + +L  M +    P+                               L
Sbjct: 467 IKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGL 526

Query: 542 VPDDTTFSIVVDLLAKDEKYHECSAVSKSSYRA 574
            P++ T++ ++D   KDEK    +++ +   R+
Sbjct: 527 CPNEVTYTALIDGYCKDEKLDTATSLLEHMKRS 559



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 113/413 (27%), Positives = 186/413 (45%), Gaps = 30/413 (7%)

Query: 126 GLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYEN 185
           G C  ++++ A  LF  M+  G+ P+ +TY  LI+G+C+   L  A  L + M       
Sbjct: 504 GFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSG--- 560

Query: 186 GLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWE 245
               + N+ +Y+++I  L K+     A+EL   M   GI P VV  T +I G C  G+  
Sbjct: 561 ---CRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTS 617

Query: 246 EVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLM 305
               +F +M++ G  PNLLT++ +I  L + GK+ EA  L   + + GL PD  TY  ++
Sbjct: 618 LALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMI 677

Query: 306 DGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGY-CKILNVEEAMSLYRQIISN-- 362
           + Y + G+++ A      M   GC+ T+ +Y +LI G   + L  ++ ++    ++ N  
Sbjct: 678 EAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCS 737

Query: 363 -GVRQT--------------------VITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEP 401
            G + T                    V   N L+S L  AG+   A +L   M    + P
Sbjct: 738 FGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCP 797

Query: 402 DLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELF 461
           D   YN L+  L +   V  A+ +F  +     E  +  +  LI  LC+  R   A   F
Sbjct: 798 DQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITF 857

Query: 462 HKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTL 514
             +  +   P  V  +++I GL R G  +   +FL  ME     P+   +  L
Sbjct: 858 ENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETRRYMPSFHIYTIL 910



 Score =  138 bits (348), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 126/469 (26%), Positives = 193/469 (41%), Gaps = 39/469 (8%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
           N  +   C SG  N   A      M      P   S+  L     K    ++    + ++
Sbjct: 464 NTIIKGYCDSG--NTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEM 521

Query: 102 VSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLING 161
           V  GL P+ +T   LI+       G C + ++  AT L ++M   G RP+V TY  LI+G
Sbjct: 522 VDDGLCPNEVTYTALID-------GYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHG 574

Query: 162 FCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKG 221
             +  N S A  L K M+    E G+    N+ +Y+ +ID LCK G    A E+F +M  
Sbjct: 575 LTKQNNFSGAEELCKVMI----EEGIFP--NVVTYTAMIDGLCKNGSTSLALEMFNKMIE 628

Query: 222 RGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINE 281
           +G  P ++  ++LI      G  EE   LF E+   G  P+ +T+  MI+     GK+  
Sbjct: 629 QGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEH 688

Query: 282 ANGLLELMIQRGLNPDRFTYNSLMDGY--------------------CLVGRIDTAREIF 321
           A   L  MI+ G  P  +TY  L+ G                     C  G   T ++  
Sbjct: 689 AFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAV 748

Query: 322 LSMHSKGCKH----TVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSG 377
             M +K  +     +V   N L++         EA  L   +IS G+      YN+LL  
Sbjct: 749 SVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCS 808

Query: 378 LFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFG 437
           L +      A  +F  M     E  L+ Y  LI  LC+ +  +EA   F  + M  +   
Sbjct: 809 LLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPD 868

Query: 438 IEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRK 486
             +   LIDGL + G  D   E  H +  +  +P+   Y+I+     +K
Sbjct: 869 DVVQAVLIDGLLRDGYKDLCMEFLHIMETRRYMPSFHIYTILAREASKK 917



 Score = 89.4 bits (220), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 56/247 (22%), Positives = 110/247 (44%), Gaps = 37/247 (14%)

Query: 349 VEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNI 408
           +   MS    +  +G+R  +  Y+ LL  L + G        +  M    V+P+L  YN 
Sbjct: 161 MARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNA 220

Query: 409 LIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKG 468
           +I+ LCK+  V +A  +   +  ++       +  +I G C+   LD+A ++F+++ ++G
Sbjct: 221 VINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEG 280

Query: 469 LVPTVVTYSIMIHGLCRKGKLEKANDFL-------------------------------- 496
             P  VTYS +I+GLC  G++ +A D +                                
Sbjct: 281 CEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAW 340

Query: 497 ---LYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
              + M+  GC PNV T+  L+ G   +      + L H+M+     + P+  T++ +++
Sbjct: 341 RLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRD--GVFPNTVTYNALIN 398

Query: 554 LLAKDEK 560
           +L ++ +
Sbjct: 399 ILVENRR 405



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 27/155 (17%), Positives = 73/155 (47%), Gaps = 2/155 (1%)

Query: 409 LIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKG 468
           LI        +   +    ML  +    G+  ++ L+  L + G      + +H++  +G
Sbjct: 151 LIKSCHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEG 210

Query: 469 LVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVV 528
           + P ++ Y+ +I+ LC+ G +  A   +  + ++  +P+  T+ +++ G  + +     +
Sbjct: 211 VQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSAL 270

Query: 529 ELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
           ++ ++MA  +    P+  T+S +++ L    + +E
Sbjct: 271 QVFNQMA--KEGCEPNTVTYSTLINGLCDSGRVNE 303


>gi|225435038|ref|XP_002281336.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900 [Vitis vinifera]
          Length = 900

 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 141/515 (27%), Positives = 247/515 (47%), Gaps = 49/515 (9%)

Query: 72  SPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVEN 131
           +P +  +N L  ++ K+   D   S +  +   GL P+ +T +ILI+ F       C   
Sbjct: 352 APSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSF-------CKRG 404

Query: 132 RIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKT 191
           ++  A      M   G++  V  Y +LI+G C+ G L  A  L  +M++    NGL  K 
Sbjct: 405 KLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIA----NGL--KP 458

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
           N+  Y+ +I   CKEG +  A  L+ EM G+GI+P     T LI G C A    E N LF
Sbjct: 459 NVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLF 518

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
            EM++    PN +T+NV+I+  CK G    A  LL+ M+++GL PD +TY  L+ G C  
Sbjct: 519 GEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCST 578

Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
           GR+  ARE    +  +  K   + ++ L++GYCK   +++A+   R+++  GV   ++ Y
Sbjct: 579 GRVSEAREFMNDLQGEQQKLNEMCFSALLHGYCKEGRLDDALDACREMLGRGVAMDLVCY 638

Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
           + L+ G+ +         L  +M    + PD   Y  +ID   K   ++ A  L+ ++  
Sbjct: 639 SVLIYGILRQQDRRSIIDLLKQMHDQGLRPDNVLYTTMIDANAKAGNLKMAFGLWDIMVS 698

Query: 432 NKFEFGIEIFNCLIDGLCKAGRLDNAWEL------------------------------- 460
                 +  +  LI+GLCK G +D A  L                               
Sbjct: 699 EGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEK 758

Query: 461 ---FHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHG 517
               H +  +G +   VTY+I+I G C+ G++++A + L+ M  +G +P+ ++++T+++ 
Sbjct: 759 AIQLHDVLLEGFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYE 818

Query: 518 FLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVV 552
           + +     + ++L   M    R + PD   ++ ++
Sbjct: 819 YCRRGDLKEAIKLWESML--NRGVNPDTVAYNFLI 851



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 129/464 (27%), Positives = 230/464 (49%), Gaps = 13/464 (2%)

Query: 78  FNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEAT 137
           F+LL     +NR     +   R ++  G+LP   TL+ ++N       GL    + + A 
Sbjct: 148 FDLLIQTYVQNRRELDGLVVVRLMMDCGILPQIRTLSGVLN-------GLIRIRQFRMAL 200

Query: 138 WLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYS 197
            LF  +++ G+RPDV  Y  ++   C   +   A  +  +M S   +       ++ +Y+
Sbjct: 201 HLFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCD------LSVATYN 254

Query: 198 IIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDL 257
           + I  LCK   V +A E+   +  +G+   V    TL+ G C    +E    +  EM++ 
Sbjct: 255 VFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEF 314

Query: 258 GPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTA 317
           G  P+    + ++D L K G I  A  L+  + + G+ P  F YN+L++  C  G++D A
Sbjct: 315 GFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEA 374

Query: 318 REIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSG 377
             +F +M  KG     V+Y+ILI+ +CK   ++ A+    ++   G++ TV  Y++L+SG
Sbjct: 375 ESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISG 434

Query: 378 LFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFG 437
             + G+   A+ LFDEM    ++P++  Y  LI G CK   +  A +L+H +        
Sbjct: 435 HCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPN 494

Query: 438 IEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLL 497
              F  LI GLC A R+  A +LF ++ +  ++P  VTY+++I G C++G   +A + L 
Sbjct: 495 TYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLD 554

Query: 498 YMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNL 541
            M + G  P+  T+  L+ G     + S+  E ++ +   ++ L
Sbjct: 555 EMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKL 598



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 155/585 (26%), Positives = 255/585 (43%), Gaps = 108/585 (18%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCF------------ 120
           P I + + +   + + R +   +  + ++VS GL PD      ++               
Sbjct: 178 PQIRTLSGVLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRAREV 237

Query: 121 -GNKE---------------RGLCVENRIKEATWLFKNMIAF-GVRPDVITYGTLINGFC 163
            G  E               RGLC   R+ EA  + KN++++ G+R DV TY TL+ G C
Sbjct: 238 IGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEI-KNLLSYKGLRADVGTYCTLVLGLC 296

Query: 164 RTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRG 223
           +         +  +M+    E G +      + S ++D L K+G +  A +L  ++K  G
Sbjct: 297 KVEEFEAGEEMMNEMI----EFGFVPSEA--AVSNLVDGLRKKGNIGSAFDLVNKVKKFG 350

Query: 224 INPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEAN 283
           + P++ V   LI+  C  G  +E   LF  M   G  PN +T++++ID  CK GK++ A 
Sbjct: 351 VAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVAL 410

Query: 284 GLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGY 343
             L  M + G+    + Y+SL+ G+C +G++  A+ +F  M + G K  VV Y  LI+GY
Sbjct: 411 HFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGY 470

Query: 344 CKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDL 403
           CK   +  A  LY ++   G+     T+  L+SGL  A +   A KLF EM  +NV P+ 
Sbjct: 471 CKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNE 530

Query: 404 STYNILIDG-----------------------------------LCKNNCVQEAVKLFHM 428
            TYN+LI+G                                   LC    V EA +  + 
Sbjct: 531 VTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMND 590

Query: 429 LEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRK-- 486
           L+  + +     F+ L+ G CK GRLD+A +   ++  +G+   +V YS++I+G+ R+  
Sbjct: 591 LQGEQQKLNEMCFSALLHGYCKEGRLDDALDACREMLGRGVAMDLVCYSVLIYGILRQQD 650

Query: 487 ---------------------------------GKLEKANDFLLYMEKNGCAPNVVTFNT 513
                                            G L+ A      M   GC PNVVT+  
Sbjct: 651 RRSIIDLLKQMHDQGLRPDNVLYTTMIDANAKAGNLKMAFGLWDIMVSEGCLPNVVTYTA 710

Query: 514 LMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKD 558
           L++G  +     K   L  +M     N +P+  T++  +D L  +
Sbjct: 711 LINGLCKIGLMDKAELLCREMLAS--NSLPNQNTYACFLDYLTSE 753



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 138/527 (26%), Positives = 212/527 (40%), Gaps = 110/527 (20%)

Query: 31  IAAVSSPETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRH 90
           I A   P + L   +  +CK G   L  A+  F  M      P +  +  L     K   
Sbjct: 421 IKATVYPYSSL---ISGHCKLG--KLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGE 475

Query: 91  YDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRP 150
                  Y ++   G+ P+  T   LI+       GLC  NR+ EA  LF  M+ + V P
Sbjct: 476 LHNAFRLYHEMTGKGISPNTYTFTALIS-------GLCHANRMAEANKLFGEMVEWNVIP 528

Query: 151 DVITYGTLINGFCRTGNLSVALRL---------------HKKMVSGDYENGLIS------ 189
           + +TY  LI G C+ GN   A  L               ++ ++SG    G +S      
Sbjct: 529 NEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFM 588

Query: 190 --------KTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCA 241
                   K N   +S ++   CKEG +D A +   EM GRG+   +V  + LI+G    
Sbjct: 589 NDLQGEQQKLNEMCFSALLHGYCKEGRLDDALDACREMLGRGVAMDLVCYSVLIYGILRQ 648

Query: 242 GNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTY 301
            +   +  L  +M D G RP+ + +  MID   K G +  A GL ++M+  G  P+  TY
Sbjct: 649 QDRRSIIDLLKQMHDQGLRPDNVLYTTMIDANAKAGNLKMAFGLWDIMVSEGCLPNVVTY 708

Query: 302 NSLMDGYCLVGRIDTA----REIFLS---------------------------MHS---K 327
            +L++G C +G +D A    RE+  S                           +H    +
Sbjct: 709 TALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVLLE 768

Query: 328 GCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYA 387
           G     V+YNILI G+CK+  ++EA  +   +I +G+    I+Y+T++    + G    A
Sbjct: 769 GFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEA 828

Query: 388 QKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDG 447
            KL++ M    V PD   YN L                                   I G
Sbjct: 829 IKLWESMLNRGVNPDTVAYNFL-----------------------------------IYG 853

Query: 448 LCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKAND 494
            C  G L  A+EL   + ++G+ P   TY+ +IHG C    +    D
Sbjct: 854 CCVTGELTKAFELRDDMMRRGVKPNRATYNSLIHGTCLMSSVSSTAD 900



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 65/243 (26%), Positives = 125/243 (51%), Gaps = 6/243 (2%)

Query: 339 LINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYN 398
           ++NG  +I     A+ L+ +I+S+G+R  V  Y  ++  L +      A+++   M+   
Sbjct: 186 VLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSG 245

Query: 399 VEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAW 458
            +  ++TYN+ I GLCKN  V EAV++ ++L        +  +  L+ GLCK    +   
Sbjct: 246 CDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGE 305

Query: 459 ELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGF 518
           E+ +++ + G VP+    S ++ GL +KG +  A D +  ++K G AP++  +N L++  
Sbjct: 306 EMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSM 365

Query: 519 LQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAK----DEKYHECSAVSKSSYRA 574
            ++ K  +   L + M    + L P+D T+SI++D   K    D   H    +++   +A
Sbjct: 366 CKDGKLDEAESLFNNMGH--KGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKA 423

Query: 575 CLY 577
            +Y
Sbjct: 424 TVY 426



 Score =  105 bits (261), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 79/295 (26%), Positives = 146/295 (49%), Gaps = 11/295 (3%)

Query: 249 GLFIEMLDLGPRPNLLT---FNVMIDCLCKGGKINEANGLL--ELMIQRGLNPDRFTYNS 303
           GLF   LD   + N  T   F+++I    +  +  E +GL+   LM+  G+ P   T + 
Sbjct: 128 GLFESFLDSYRKCNFSTTLGFDLLIQTYVQNRR--ELDGLVVVRLMMDCGILPQIRTLSG 185

Query: 304 LMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNG 363
           +++G   + +   A  +F  + S G +  V  Y  ++   C++ +   A  +  ++ S+G
Sbjct: 186 VLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSG 245

Query: 364 VRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAV 423
              +V TYN  + GL +  +   A ++ + +    +  D+ TY  L+ GLCK    +   
Sbjct: 246 CDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGE 305

Query: 424 KLFHMLEMNKFEF--GIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIH 481
           ++  M EM +F F       + L+DGL K G + +A++L +K+ + G+ P++  Y+ +I+
Sbjct: 306 EM--MNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALIN 363

Query: 482 GLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAE 536
            +C+ GKL++A      M   G  PN VT++ L+  F +  K    +  L KM E
Sbjct: 364 SMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTE 418


>gi|255575351|ref|XP_002528578.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223531974|gb|EEF33786.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 817

 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 153/528 (28%), Positives = 263/528 (49%), Gaps = 20/528 (3%)

Query: 41  LNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRK 100
            N  L   CK  +  + EAR     M      P   ++++LF  + +    +  +  Y +
Sbjct: 284 FNSLLSGLCK--MRKMKEARSLLKEMEVNGFMPDGYTYSILFDGLLRCDDGNGAMELYEQ 341

Query: 101 LVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLIN 160
               G+  +  T +IL+N       GLC + ++++A  + K     G+  D + Y T +N
Sbjct: 342 ATEKGIRINNYTGSILLN-------GLCKQGKVEKAEEILKKFTENGLVADEVIYNTFVN 394

Query: 161 GFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMK 220
           G+CR G+++ A+   ++M S     GL  + N  +++ +ID  C    +DKA+E   +M 
Sbjct: 395 GYCRIGDMNKAILTIERMESF----GL--RPNSITFNSLIDKFCDMKEMDKAEEWVKKMA 448

Query: 221 GRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKIN 280
            +G+ P+V    TLI G+     ++    +  +M ++G +PN++++  +I+CLCK GKI 
Sbjct: 449 EKGVTPSVETYNTLIDGYGKLCTFDRCFQILEQMEEIGVKPNVVSYGSLINCLCKDGKIL 508

Query: 281 EANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILI 340
           EA  +L  MI RG+ P+   YN L+DG C+VG++  A   F  M       T+V+YN+LI
Sbjct: 509 EAEIVLRDMICRGVLPNAQVYNMLIDGSCMVGKVKDALRFFDEMMRSEISPTLVTYNVLI 568

Query: 341 NGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVE 400
           +G CK   + EA     QI S+G    VITYN+L+SG   AG       L++ MK   ++
Sbjct: 569 DGLCKKGKLTEAEDFLTQITSSGHSPDVITYNSLISGYANAGNVSKCLGLYETMKNLGIK 628

Query: 401 PDLSTYNILIDGLCKNNCVQEAVKLFH-MLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWE 459
           P + TY+ LI G C    ++   KL++ ML+MN     + ++N +I    + G    A+ 
Sbjct: 629 PTVRTYHPLISG-CSKEGIELVEKLYNEMLQMNLLPDRV-VYNAMIHCYAEIGNTQKAYS 686

Query: 460 LFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFL 519
           L   +  +G+ P  +TY+ +I G  R+GKL    D +  M+    AP   T++ L+ G  
Sbjct: 687 LHQGMLDQGIHPDKMTYNSLILGHFREGKLSNIKDLVNNMKAKELAPKADTYDILVKGHC 746

Query: 520 QNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAV 567
                S       +M   E N +P+ +  + +   L ++ +  E   +
Sbjct: 747 DLKDFSGAYVWYREMV--ENNFLPNASICNELTAGLEQEGRLQEVQVI 792



 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 147/497 (29%), Positives = 236/497 (47%), Gaps = 16/497 (3%)

Query: 56  LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNI 115
           + +A   F  M ++     I ++N L     K    DA      ++    + P+ +T N 
Sbjct: 227 IRDAEKMFDEMCNINLVGSIVTYNTLIDGYCKVGELDAAFKMRERMKEKSVAPNIITFNS 286

Query: 116 LINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLH 175
           L++       GLC   ++KEA  L K M   G  PD  TY  L +G  R  + + A+ L+
Sbjct: 287 LLS-------GLCKMRKMKEARSLLKEMEVNGFMPDGYTYSILFDGLLRCDDGNGAMELY 339

Query: 176 KKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLI 235
           ++      E G+  + N ++ SI+++ LCK+G V+KA+E+  +    G+    V+  T +
Sbjct: 340 EQAT----EKGI--RINNYTGSILLNGLCKQGKVEKAEEILKKFTENGLVADEVIYNTFV 393

Query: 236 HGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLN 295
           +G+C  G+  +       M   G RPN +TFN +ID  C   ++++A   ++ M ++G+ 
Sbjct: 394 NGYCRIGDMNKAILTIERMESFGLRPNSITFNSLIDKFCDMKEMDKAEEWVKKMAEKGVT 453

Query: 296 PDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSL 355
           P   TYN+L+DGY  +   D   +I   M   G K  VVSY  LIN  CK   + EA  +
Sbjct: 454 PSVETYNTLIDGYGKLCTFDRCFQILEQMEEIGVKPNVVSYGSLINCLCKDGKILEAEIV 513

Query: 356 YRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCK 415
            R +I  GV      YN L+ G    G+   A + FDEM    + P L TYN+LIDGLCK
Sbjct: 514 LRDMICRGVLPNAQVYNMLIDGSCMVGKVKDALRFFDEMMRSEISPTLVTYNVLIDGLCK 573

Query: 416 NNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVT 475
              + EA      +  +     +  +N LI G   AG +     L+  +   G+ PTV T
Sbjct: 574 KGKLTEAEDFLTQITSSGHSPDVITYNSLISGYANAGNVSKCLGLYETMKNLGIKPTVRT 633

Query: 476 YSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMA 535
           Y  +I G C K  +E        M +    P+ V +N ++H + +   T K   L   M 
Sbjct: 634 YHPLISG-CSKEGIELVEKLYNEMLQMNLLPDRVVYNAMIHCYAEIGNTQKAYSLHQGML 692

Query: 536 EPERNLVPDDTTFSIVV 552
             ++ + PD  T++ ++
Sbjct: 693 --DQGIHPDKMTYNSLI 707



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 123/412 (29%), Positives = 194/412 (47%), Gaps = 48/412 (11%)

Query: 93  AVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDV 152
           A+++  R + S GL P+ +T N LI+ F       C    + +A    K M   GV P V
Sbjct: 405 AILTIER-MESFGLRPNSITFNSLIDKF-------CDMKEMDKAEEWVKKMAEKGVTPSV 456

Query: 153 ITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKA 212
            TY TLI+G+ +        ++ ++M     E G+  K N+ SY  +I+ LCK+G + +A
Sbjct: 457 ETYNTLIDGYGKLCTFDRCFQILEQM----EEIGV--KPNVVSYGSLINCLCKDGKILEA 510

Query: 213 KELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDC 272
           + +  +M  RG+ P   V   LI G C  G  ++    F EM+     P L+T+NV+ID 
Sbjct: 511 EIVLRDMICRGVLPNAQVYNMLIDGSCMVGKVKDALRFFDEMMRSEISPTLVTYNVLIDG 570

Query: 273 LCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHT 332
           LCK GK+ EA   L  +   G +PD  TYNSL+ GY   G +     ++ +M + G K T
Sbjct: 571 LCKKGKLTEAEDFLTQITSSGHSPDVITYNSLISGYANAGNVSKCLGLYETMKNLGIKPT 630

Query: 333 VVSYNILING----------------------------------YCKILNVEEAMSLYRQ 358
           V +Y+ LI+G                                  Y +I N ++A SL++ 
Sbjct: 631 VRTYHPLISGCSKEGIELVEKLYNEMLQMNLLPDRVVYNAMIHCYAEIGNTQKAYSLHQG 690

Query: 359 IISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNC 418
           ++  G+    +TYN+L+ G F+ G+    + L + MK   + P   TY+IL+ G C    
Sbjct: 691 MLDQGIHPDKMTYNSLILGHFREGKLSNIKDLVNNMKAKELAPKADTYDILVKGHCDLKD 750

Query: 419 VQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLV 470
              A   +  +  N F     I N L  GL + GRL     +  ++  KG++
Sbjct: 751 FSGAYVWYREMVENNFLPNASICNELTAGLEQEGRLQEVQVICSEMNVKGII 802



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 119/393 (30%), Positives = 196/393 (49%), Gaps = 13/393 (3%)

Query: 204 CKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNL 263
           CK  ++ +A EL+  M+  G  P++V  + L         + +V  LF+E+ + G R + 
Sbjct: 117 CKSKMLREAVELYEFMRRDGKLPSLVSLSLLFSCLVNEKQFVKVVDLFMEIENSGFRTDT 176

Query: 264 LTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLS 323
             +   I    K   +      L+ M +RG+ P+ F YN L+ G C   RI  A ++F  
Sbjct: 177 FMYAKAIQAAVKLQNLKMGMEFLDSMRKRGVRPNVFIYNVLIGGLCREKRIRDAEKMFDE 236

Query: 324 MHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQ 383
           M +     ++V+YN LI+GYCK+  ++ A  +  ++    V   +IT+N+LLSGL +  +
Sbjct: 237 MCNINLVGSIVTYNTLIDGYCKVGELDAAFKMRERMKEKSVAPNIITFNSLLSGLCKMRK 296

Query: 384 AGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFN- 442
              A+ L  EM++    PD  TY+IL DGL + +    A++L+        E GI I N 
Sbjct: 297 MKEARSLLKEMEVNGFMPDGYTYSILFDGLLRCDDGNGAMELYE----QATEKGIRINNY 352

Query: 443 ---CLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYM 499
               L++GLCK G+++ A E+  K  + GLV   V Y+  ++G CR G + KA   +  M
Sbjct: 353 TGSILLNGLCKQGKVEKAEEILKKFTENGLVADEVIYNTFVNGYCRIGDMNKAILTIERM 412

Query: 500 EKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDE 559
           E  G  PN +TFN+L+  F    +  K  E + KMA  E+ + P   T++ ++D   K  
Sbjct: 413 ESFGLRPNSITFNSLIDKFCDMKEMDKAEEWVKKMA--EKGVTPSVETYNTLIDGYGKLC 470

Query: 560 KYHECSAVSKSSYRACLYVTIFQPSSLGSMIGC 592
            +  C  + +      +   +    S GS+I C
Sbjct: 471 TFDRCFQILEQMEEIGVKPNVV---SYGSLINC 500



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 99/368 (26%), Positives = 181/368 (49%), Gaps = 10/368 (2%)

Query: 190 KTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNG 249
           +T+ F Y+  I +  K   +    E    M+ RG+ P V +   LI G C      +   
Sbjct: 173 RTDTFMYAKAIQAAVKLQNLKMGMEFLDSMRKRGVRPNVFIYNVLIGGLCREKRIRDAEK 232

Query: 250 LFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYC 309
           +F EM ++    +++T+N +ID  CK G+++ A  + E M ++ + P+  T+NSL+ G C
Sbjct: 233 MFDEMCNINLVGSIVTYNTLIDGYCKVGELDAAFKMRERMKEKSVAPNIITFNSLLSGLC 292

Query: 310 LVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVI 369
            + ++  AR +   M   G      +Y+IL +G  +  +   AM LY Q    G+R    
Sbjct: 293 KMRKMKEARSLLKEMEVNGFMPDGYTYSILFDGLLRCDDGNGAMELYEQATEKGIRINNY 352

Query: 370 TYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHML 429
           T + LL+GL + G+   A+++  +     +  D   YN  ++G C+   + +A+     +
Sbjct: 353 TGSILLNGLCKQGKVEKAEEILKKFTENGLVADEVIYNTFVNGYCRIGDMNKAILTIERM 412

Query: 430 EMNKFEFGIE----IFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCR 485
           E     FG+      FN LID  C    +D A E   K+ +KG+ P+V TY+ +I G  +
Sbjct: 413 E----SFGLRPNSITFNSLIDKFCDMKEMDKAEEWVKKMAEKGVTPSVETYNTLIDGYGK 468

Query: 486 KGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDD 545
               ++    L  ME+ G  PNVV++ +L++   ++ K  +   +L  M    R ++P+ 
Sbjct: 469 LCTFDRCFQILEQMEEIGVKPNVVSYGSLINCLCKDGKILEAEIVLRDMI--CRGVLPNA 526

Query: 546 TTFSIVVD 553
             +++++D
Sbjct: 527 QVYNMLID 534



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 99/378 (26%), Positives = 178/378 (47%), Gaps = 47/378 (12%)

Query: 56  LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNI 115
           +++A  +   M     +P + ++N L     K   +D       ++  IG+ P+ ++   
Sbjct: 437 MDKAEEWVKKMAEKGVTPSVETYNTLIDGYGKLCTFDRCFQILEQMEEIGVKPNVVSYGS 496

Query: 116 LINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLH 175
           LINC       LC + +I EA  + ++MI  GV P+   Y  LI+G C  G +  ALR  
Sbjct: 497 LINC-------LCKDGKILEAEIVLRDMICRGVLPNAQVYNMLIDGSCMVGKVKDALRFF 549

Query: 176 KKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLI 235
            +M+  +     IS T + +Y+++ID LCK+G + +A++   ++   G +P V+   +LI
Sbjct: 550 DEMMRSE-----ISPT-LVTYNVLIDGLCKKGKLTEAEDFLTQITSSGHSPDVITYNSLI 603

Query: 236 HGFCCAGNWEEVNGLFIEMLDLGPRPNLLTF----------------------------- 266
            G+  AGN  +  GL+  M +LG +P + T+                             
Sbjct: 604 SGYANAGNVSKCLGLYETMKNLGIKPTVRTYHPLISGCSKEGIELVEKLYNEMLQMNLLP 663

Query: 267 -----NVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIF 321
                N MI C  + G   +A  L + M+ +G++PD+ TYNSL+ G+   G++   +++ 
Sbjct: 664 DRVVYNAMIHCYAEIGNTQKAYSLHQGMLDQGIHPDKMTYNSLILGHFREGKLSNIKDLV 723

Query: 322 LSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQA 381
            +M +K       +Y+IL+ G+C + +   A   YR+++ N         N L +GL Q 
Sbjct: 724 NNMKAKELAPKADTYDILVKGHCDLKDFSGAYVWYREMVENNFLPNASICNELTAGLEQE 783

Query: 382 GQAGYAQKLFDEMKLYNV 399
           G+    Q +  EM +  +
Sbjct: 784 GRLQEVQVICSEMNVKGI 801


>gi|297738205|emb|CBI27406.3| unnamed protein product [Vitis vinifera]
          Length = 821

 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 136/446 (30%), Positives = 233/446 (52%), Gaps = 21/446 (4%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
           P + SFN L     K    D   SF+  ++  GLLPD  + NIL++       GLCV   
Sbjct: 268 PSVVSFNALMSGFCKMGSVDVAKSFFCMMIKYGLLPDVYSYNILLH-------GLCVAGS 320

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
           ++EA     +M   GV PD++TY  L NGF   G +S A ++ ++M+     NGL    +
Sbjct: 321 MEEALEFTNDMENHGVEPDIVTYNILANGFRILGLISGAWKVVQRMLL----NGL--NPD 374

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
           + +Y+I+I   C+ G ++++ +L  +M  +G+  ++V  T L+   C +G  +E   L  
Sbjct: 375 LVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLH 434

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
           EM  +G +P+LLT++         G + EA  L E M  + + P+ F  ++++ G    G
Sbjct: 435 EMEVIGLKPDLLTYS--------RGAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKG 486

Query: 313 RIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYN 372
            I  A+  F S+        ++ YNI+I+GY K+ N+ EA+  Y+QII  G+  T++T+N
Sbjct: 487 AISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFN 546

Query: 373 TLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMN 432
           +L+ G  + G+   A KL D +K++ + P   TY  L++G C+   +     + H +E  
Sbjct: 547 SLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAK 606

Query: 433 KFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKA 492
             +     +  ++ GLCK GRL  + +L   +  +GL P  +TY+ +I   C+   L+KA
Sbjct: 607 AIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKA 666

Query: 493 NDFLLYMEKNGCAPNVVTFNTLMHGF 518
                 M ++   P+ VT+N L++G 
Sbjct: 667 FQLHNQMLQHSLQPSPVTYNVLINGL 692



 Score =  208 bits (529), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 134/474 (28%), Positives = 244/474 (51%), Gaps = 24/474 (5%)

Query: 80  LLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWL 139
           L+ G   ++R  DAV +F R+       P  ++ N L++       G C    +  A   
Sbjct: 241 LIDGLCRQSRLQDAV-TFLRETGGEEFGPSVVSFNALMS-------GFCKMGSVDVAKSF 292

Query: 140 FKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSII 199
           F  MI +G+ PDV +Y  L++G C  G++  AL       + D EN  + + +I +Y+I+
Sbjct: 293 FCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEF-----TNDMENHGV-EPDIVTYNIL 346

Query: 200 IDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGP 259
            +     GL+  A ++   M   G+NP +V  T LI G C  GN EE   L  +ML  G 
Sbjct: 347 ANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGL 406

Query: 260 RPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTARE 319
           + +++T+ V++  LCK G+I+EA  LL  M   GL PD  TY+         G ++ A E
Sbjct: 407 KLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSR--------GAVEEAIE 458

Query: 320 IFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLF 379
           ++  M SK         + +I+G  +   + EA   +  +  + V + +I YN ++ G  
Sbjct: 459 LYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYA 518

Query: 380 QAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIE 439
           + G  G A + + ++    + P + T+N LI G CK   + EAVKL   ++++       
Sbjct: 519 KLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSV 578

Query: 440 IFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYM 499
            +  L++G C+ G + + +++ H++  K + PT +TY++++ GLC++G+L ++   L YM
Sbjct: 579 TYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYM 638

Query: 500 EKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
              G  P+ +T+NT++  F + +   K  +L ++M   + +L P   T++++++
Sbjct: 639 YARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQML--QHSLQPSPVTYNVLIN 690



 Score =  208 bits (529), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 121/413 (29%), Positives = 211/413 (51%), Gaps = 29/413 (7%)

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
           N ++  I+ID LC++  +  A     E  G    P+VV    L+ GFC  G+ +     F
Sbjct: 234 NEYTNPILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALMSGFCKMGSVDVAKSFF 293

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
             M+  G  P++ ++N+++  LC  G + EA      M   G+ PD  TYN L +G+ ++
Sbjct: 294 CMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNILANGFRIL 353

Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
           G I  A ++   M   G    +V+Y ILI G+C++ N+EE+  L  +++S G++ +++TY
Sbjct: 354 GLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTY 413

Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYN------------------------ 407
             LLS L ++G+   A  L  EM++  ++PDL TY+                        
Sbjct: 414 TVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSRGAVEEAIELYEEMCSKRIYPNSF 473

Query: 408 ---ILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKL 464
               +I GL +   + EA   F  +  +     I ++N +IDG  K G +  A   + ++
Sbjct: 474 VCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQI 533

Query: 465 PQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKT 524
            +KG+ PT+VT++ +I+G C+KGKL +A   L  ++ +G  P  VT+ TLM+G+ +    
Sbjct: 534 IEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDM 593

Query: 525 SKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKSSYRACLY 577
             + ++LH+M    + + P   T+++VV  L K+ + HE   + K  Y   L+
Sbjct: 594 HSMFDMLHEM--EAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLF 644



 Score =  204 bits (520), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 144/556 (25%), Positives = 255/556 (45%), Gaps = 77/556 (13%)

Query: 41  LNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRK 100
            N  +   CK G +++  A+ FF  M      P + S+N+L   +      +  + F   
Sbjct: 273 FNALMSGFCKMGSVDV--AKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTND 330

Query: 101 LVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLIN 160
           + + G+ PD +T NIL N       G  +   I  A  + + M+  G+ PD++TY  LI 
Sbjct: 331 MENHGVEPDIVTYNILAN-------GFRILGLISGAWKVVQRMLLNGLNPDLVTYTILIC 383

Query: 161 GFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAK------- 213
           G C+ GN+  + +L +KM+S     GL  K +I +Y++++ SLCK G +D+A        
Sbjct: 384 GHCQMGNIEESFKLKEKMLS----QGL--KLSIVTYTVLLSSLCKSGRIDEAVILLHEME 437

Query: 214 --------------------ELFLEMKGRGINPAVVVCTT-------------------- 233
                               EL+ EM  + I P   VC+                     
Sbjct: 438 VIGLKPDLLTYSRGAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDS 497

Query: 234 ---------------LIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGK 278
                          +I G+   GN  E    + ++++ G  P ++TFN +I   CK GK
Sbjct: 498 VTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGK 557

Query: 279 INEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNI 338
           + EA  LL+ +   GL P   TY +LM+GYC  G + +  ++   M +K  K T ++Y +
Sbjct: 558 LAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTV 617

Query: 339 LINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYN 398
           ++ G CK   + E++ L + + + G+    ITYNT++    +A     A +L ++M  ++
Sbjct: 618 VVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHS 677

Query: 399 VEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAW 458
           ++P   TYN+LI+GLC    +++A +L   L+          +  +I   C  G + NA 
Sbjct: 678 LQPSPVTYNVLINGLCVYGNLKDADRLLVTLQDQSIRLTKVAYTTIIKAHCAKGDVQNAL 737

Query: 459 ELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGF 518
             FH++ ++G   ++  YS +I+ LC++  +  A  F   M  +G  P+      +++ F
Sbjct: 738 VFFHQMVERGFEVSIRDYSAVINRLCKRNLITDAKFFFCMMLTHGIPPDQDICLVMLNAF 797

Query: 519 LQNNKTSKVVELLHKM 534
            ++   + V E+   M
Sbjct: 798 HRSGDPNSVFEIFAMM 813



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 103/381 (27%), Positives = 169/381 (44%), Gaps = 68/381 (17%)

Query: 244 WEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNS 303
           W+  N    E+   G   N  T  ++ID LC+  ++ +A   L         P   ++N+
Sbjct: 220 WDVYN----EIKASGVPQNEYTNPILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNA 275

Query: 304 LMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNG 363
           LM G+C +G +D A+  F  M   G    V SYNIL++G C   ++EEA+     + ++G
Sbjct: 276 LMSGFCKMGSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHG 335

Query: 364 VRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAV 423
           V   ++TYN L +G    G    A K+   M L  + PDL TY ILI G C+   ++E+ 
Sbjct: 336 VEPDIVTYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESF 395

Query: 424 KLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTY------- 476
           KL   +     +  I  +  L+  LCK+GR+D A  L H++   GL P ++TY       
Sbjct: 396 KLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSRGAVEE 455

Query: 477 --------------------SIMIHGLCRKGKLEKAN-------------DFLLY----- 498
                               S +I GL  KG + +A              + +LY     
Sbjct: 456 AIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMID 515

Query: 499 -----------------MEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNL 541
                            + + G +P +VTFN+L++GF +  K ++ V+LL  +      L
Sbjct: 516 GYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTI--KVHGL 573

Query: 542 VPDDTTFSIVVDLLAKDEKYH 562
           VP   T++ +++   ++   H
Sbjct: 574 VPTSVTYTTLMNGYCEEGDMH 594



 Score =  115 bits (288), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 79/287 (27%), Positives = 143/287 (49%), Gaps = 9/287 (3%)

Query: 267 NVMIDCLC----KGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFL 322
           NV+ D L     +   +++A  +L  M    L     TYNSL+     +   D   +++ 
Sbjct: 168 NVVWDMLACAYSRAEMVHDALFVLAKMKVLNLQVSIATYNSLLYN---LRHTDIMWDVYN 224

Query: 323 SMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAG 382
            + + G      +  ILI+G C+   +++A++  R+        +V+++N L+SG  + G
Sbjct: 225 EIKASGVPQNEYTNPILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALMSGFCKMG 284

Query: 383 QAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFN 442
               A+  F  M  Y + PD+ +YNIL+ GLC    ++EA++  + +E +  E  I  +N
Sbjct: 285 SVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYN 344

Query: 443 CLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKN 502
            L +G    G +  AW++  ++   GL P +VTY+I+I G C+ G +E++      M   
Sbjct: 345 ILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQ 404

Query: 503 GCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFS 549
           G   ++VT+  L+    ++ +  + V LLH+M      L PD  T+S
Sbjct: 405 GLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVI--GLKPDLLTYS 449


>gi|147861320|emb|CAN83994.1| hypothetical protein VITISV_031191 [Vitis vinifera]
          Length = 559

 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 127/349 (36%), Positives = 198/349 (56%), Gaps = 13/349 (3%)

Query: 74  PISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRI 133
           P  S   LF  + K        +FY +++  G  PD    N+L++        LC E++I
Sbjct: 189 PFHSCGYLFDRLMKLNLTSPAWAFYEEILDCGYPPDVCKFNVLMH-------RLCKEHKI 241

Query: 134 KEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNI 193
            EA  LF  +   G+RP V+++ TLING+C++GNL    RL + M+    EN +    ++
Sbjct: 242 NEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMM----ENRVFP--DV 295

Query: 194 FSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIE 253
           F+YS++I+ LCKEG +D A +LFLEM  RG+ P  V  TTLI+G C  G  +    ++ +
Sbjct: 296 FTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQ 355

Query: 254 MLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGR 313
           ML  G +P+++T+N +I+ LCK G + EA  L+  M QRGL PD+FTY  L+DG C  G 
Sbjct: 356 MLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGD 415

Query: 314 IDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNT 373
           +++A EI   M  +G +   V++  LI+G+C+   V EA    R+++  G++    TY  
Sbjct: 416 LESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTM 475

Query: 374 LLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEA 422
           ++ G  + G      KL  EM+     P + TYN+L++GLCK   ++ A
Sbjct: 476 VIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKNA 524



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 129/423 (30%), Positives = 216/423 (51%), Gaps = 17/423 (4%)

Query: 136 ATWLFKNMI-AFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNI- 193
           A+ +F +++ A G     + +  L+N +  +G  S A++  +          L+ K N+ 
Sbjct: 138 ASSVFTSVLEARGTHQSNLVFSVLMNAYTDSGYFSDAIQCFR----------LVRKHNLQ 187

Query: 194 ---FSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGL 250
               S   + D L K  L   A   + E+   G  P V     L+H  C      E   L
Sbjct: 188 IPFHSCGYLFDRLMKLNLTSPAWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLL 247

Query: 251 FIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCL 310
           F E+   G RP +++FN +I+  CK G +++   L   M++  + PD FTY+ L++G C 
Sbjct: 248 FGEIGKRGLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCK 307

Query: 311 VGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVIT 370
            G++D A ++FL M  +G     V++  LING+C     +  M +Y+Q++  GV+  VIT
Sbjct: 308 EGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVIT 367

Query: 371 YNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLE 430
           YNTL++GL + G    A+KL  EM    ++PD  TY +LIDG CK   ++ A+++   + 
Sbjct: 368 YNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMV 427

Query: 431 MNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLE 490
               E     F  LI G C+ G++  A     ++ + G+ P   TY+++IHG C+KG ++
Sbjct: 428 KEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVK 487

Query: 491 KANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSI 550
                L  M+ +G  P VVT+N L++G  +  +      LL  M      +VPDD T++I
Sbjct: 488 TGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDAML--NLGVVPDDITYNI 545

Query: 551 VVD 553
           +++
Sbjct: 546 LLE 548



 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 113/336 (33%), Positives = 191/336 (56%), Gaps = 8/336 (2%)

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
           ++  +++++  LCKE  +++A+ LF E+  RG+ P VV   TLI+G+C +GN ++   L 
Sbjct: 224 DVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQGFRLK 283

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
             M++    P++ T++V+I+ LCK G++++AN L   M  RGL P+  T+ +L++G+C+ 
Sbjct: 284 RFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVT 343

Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
           GR D   EI+  M  KG K  V++YN LING CK+ ++ EA  L  ++   G++    TY
Sbjct: 344 GRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTY 403

Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
             L+ G  + G    A ++  EM    +E D   +  LI G C+   V EA +    +  
Sbjct: 404 TMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREM-- 461

Query: 432 NKFEFGIE----IFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKG 487
              E GI+     +  +I G CK G +   ++L  ++   G VP VVTY+++++GLC++G
Sbjct: 462 --LEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQG 519

Query: 488 KLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNK 523
           +++ AN  L  M   G  P+ +T+N L+   LQ  K
Sbjct: 520 QMKNANMLLDAMLNLGVVPDDITYNILLERTLQAWK 555



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 111/346 (32%), Positives = 176/346 (50%), Gaps = 15/346 (4%)

Query: 40  QLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYR 99
           + N  +H  CK   IN  EA+  FG +      P + SFN L     K+ + D      R
Sbjct: 227 KFNVLMHRLCKEHKIN--EAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQGFRLKR 284

Query: 100 KLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLI 159
            ++   + PD  T ++LIN       GLC E ++ +A  LF  M   G+ P+ +T+ TLI
Sbjct: 285 FMMENRVFPDVFTYSVLIN-------GLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLI 337

Query: 160 NGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEM 219
           NG C TG   + + ++++M+      G+  K ++ +Y+ +I+ LCK G + +AK+L +EM
Sbjct: 338 NGHCVTGRADLGMEIYQQML----RKGV--KPDVITYNTLINGLCKVGDLREAKKLVIEM 391

Query: 220 KGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKI 279
             RG+ P     T LI G C  G+ E    +  EM+  G   + + F  +I   C+ G++
Sbjct: 392 TQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQV 451

Query: 280 NEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNIL 339
            EA   L  M++ G+ PD  TY  ++ G+C  G + T  ++   M   G    VV+YN+L
Sbjct: 452 IEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVL 511

Query: 340 INGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAG 385
           +NG CK   ++ A  L   +++ GV    ITYN LL    QA + G
Sbjct: 512 LNGLCKQGQMKNANMLLDAMLNLGVVPDDITYNILLERTLQAWKQG 557



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 105/339 (30%), Positives = 169/339 (49%), Gaps = 13/339 (3%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
           P +  FN+L   + K    +     + ++   GL P  ++ N LIN       G C    
Sbjct: 223 PDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLIN-------GYCKSGN 275

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
           + +   L + M+   V PDV TY  LING C+ G L  A +L  +M     + GL+   N
Sbjct: 276 LDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMC----DRGLVP--N 329

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
             +++ +I+  C  G  D   E++ +M  +G+ P V+   TLI+G C  G+  E   L I
Sbjct: 330 DVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVI 389

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
           EM   G +P+  T+ ++ID  CK G +  A  + + M++ G+  D   + +L+ G+C  G
Sbjct: 390 EMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREG 449

Query: 313 RIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYN 372
           ++  A      M   G K    +Y ++I+G+CK  +V+    L +++  +G    V+TYN
Sbjct: 450 QVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYN 509

Query: 373 TLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILID 411
            LL+GL + GQ   A  L D M    V PD  TYNIL++
Sbjct: 510 VLLNGLCKQGQMKNANMLLDAMLNLGVVPDDITYNILLE 548



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 81/316 (25%), Positives = 153/316 (48%), Gaps = 19/316 (6%)

Query: 260 RPNLLTFNVMIDCLCKGGKINEANGLLELMIQR-----------------GLNPDRFTYN 302
           R ++ ++  M   LC    ++EA  LL+ ++ R                 G +     ++
Sbjct: 100 RLSIHSYCTMTHFLCTHKMLSEAQSLLQFVVSRKGKNSASSVFTSVLEARGTHQSNLVFS 159

Query: 303 SLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISN 362
            LM+ Y   G    A + F  +     +    S   L +   K+     A + Y +I+  
Sbjct: 160 VLMNAYTDSGYFSDAIQCFRLVRKHNLQIPFHSCGYLFDRLMKLNLTSPAWAFYEEILDC 219

Query: 363 GVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEA 422
           G    V  +N L+  L +  +   AQ LF E+    + P + ++N LI+G CK+  + + 
Sbjct: 220 GYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQG 279

Query: 423 VKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHG 482
            +L   +  N+    +  ++ LI+GLCK G+LD+A +LF ++  +GLVP  VT++ +I+G
Sbjct: 280 FRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLING 339

Query: 483 LCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLV 542
            C  G+ +   +    M + G  P+V+T+NTL++G  +     +  +L+ +M   +R L 
Sbjct: 340 HCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMT--QRGLK 397

Query: 543 PDDTTFSIVVDLLAKD 558
           PD  T+++++D   K+
Sbjct: 398 PDKFTYTMLIDGCCKE 413


>gi|449453087|ref|XP_004144290.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
 gi|449522905|ref|XP_004168466.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 915

 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 140/457 (30%), Positives = 229/457 (50%), Gaps = 13/457 (2%)

Query: 78  FNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEAT 137
           +N+L   +++    D + S Y +++   + P+  TLN ++N       G C    + EA 
Sbjct: 172 YNMLLMLLSRFLMIDEMKSVYLEMLDDMVTPNIFTLNTMVN-------GYCKLGNVVEAE 224

Query: 138 WLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYS 197
                ++  G+  D  TY +LI G+CR  N+  A  +   M +     G +   N  SY+
Sbjct: 225 LYVSKIVQAGLSLDTFTYTSLILGYCRNKNVDAANAIFLSMPN----KGCLR--NEVSYT 278

Query: 198 IIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDL 257
            +I   C+   VD+A +LF +M      P V   T +I   C  G   E   +F EM + 
Sbjct: 279 NLIHGFCEARRVDEALKLFSQMHEDNCWPTVRTYTVIIFALCQLGRKTEALNMFKEMTEK 338

Query: 258 GPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTA 317
             +PN+ T+ V+I  LC+    ++A  +L  M+++GL P   TYN+L+DGYC  G   +A
Sbjct: 339 HCQPNVHTYTVLICSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSASA 398

Query: 318 REIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSG 377
            EI   M S  C     +YN LI G+C+  N+ +AMSL  +++   ++  V+TYN L+ G
Sbjct: 399 LEILSLMESNNCSPNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHG 458

Query: 378 LFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFG 437
             + G  G A KL   M    + PD  TY++ ID LCK   V+EA  LF  L+    +  
Sbjct: 459 QCKEGDLGSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKAN 518

Query: 438 IEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLL 497
             I++ LIDG CK G++ +   L  K+   G VP  +TY+ +I G C++   ++A   + 
Sbjct: 519 EVIYSTLIDGYCKVGKVSDGRFLLDKMLSAGCVPNSITYNSLIDGYCKEKNFKEARLLVD 578

Query: 498 YMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKM 534
            M K    P   T+  L+   L++++  +  ++  +M
Sbjct: 579 IMIKRDIEPAADTYTILIDNLLKDDEFDQAHDMFDQM 615



 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 144/453 (31%), Positives = 221/453 (48%), Gaps = 15/453 (3%)

Query: 75  ISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIK 134
           +S  NL+ G   + R  D  +  + ++      P   T  ++I         LC   R  
Sbjct: 275 VSYTNLIHG-FCEARRVDEALKLFSQMHEDNCWPTVRTYTVII-------FALCQLGRKT 326

Query: 135 EATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIF 194
           EA  +FK M     +P+V TY  LI   C   N   A    KK+++G  E GLI   ++ 
Sbjct: 327 EALNMFKEMTEKHCQPNVHTYTVLICSLCEDSNFDDA----KKILNGMLEKGLIP--SVV 380

Query: 195 SYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEM 254
           +Y+ +ID  CK+GL   A E+   M+    +P       LI GFC   N  +   L  +M
Sbjct: 381 TYNALIDGYCKKGLSASALEILSLMESNNCSPNARTYNELILGFCRGKNIHKAMSLLHKM 440

Query: 255 LDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRI 314
           L+   +PN++T+N++I   CK G +  A  LL LM + GL PD +TY+  +D  C  G +
Sbjct: 441 LERKLQPNVVTYNILIHGQCKEGDLGSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLV 500

Query: 315 DTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTL 374
           + AR +F S+  KG K   V Y+ LI+GYCK+  V +   L  +++S G     ITYN+L
Sbjct: 501 EEARSLFESLKEKGIKANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAGCVPNSITYNSL 560

Query: 375 LSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKF 434
           + G  +      A+ L D M   ++EP   TY ILID L K++   +A  +F  +     
Sbjct: 561 IDGYCKEKNFKEARLLVDIMIKRDIEPAADTYTILIDNLLKDDEFDQAHDMFDQMLSTGS 620

Query: 435 EFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKAND 494
              + I+   I   C  GRL +A  L  K+  KG++P  + Y++ I    R G ++ A  
Sbjct: 621 HPDVFIYTAFIHAYCSHGRLKDAEVLICKMNAKGIMPDTMLYTLFIDAYGRFGSIDGAFG 680

Query: 495 FLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKV 527
            L  M + GC P+  T++ L+   L N K  +V
Sbjct: 681 ILKRMHEVGCEPSYYTYSCLIK-HLSNAKPKEV 712



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 140/500 (28%), Positives = 233/500 (46%), Gaps = 23/500 (4%)

Query: 41  LNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRK 100
           LN  ++  CK G  N+ EA  +   +     S    ++  L     +N++ DA  + +  
Sbjct: 207 LNTMVNGYCKLG--NVVEAELYVSKIVQAGLSLDTFTYTSLILGYCRNKNVDAANAIFLS 264

Query: 101 LVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLIN 160
           + + G L + ++   LI+       G C   R+ EA  LF  M      P V TY  +I 
Sbjct: 265 MPNKGCLRNEVSYTNLIH-------GFCEARRVDEALKLFSQMHEDNCWPTVRTYTVIIF 317

Query: 161 GFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMK 220
             C+ G  + AL + K+M           + N+ +Y+++I SLC++   D AK++   M 
Sbjct: 318 ALCQLGRKTEALNMFKEMTEKH------CQPNVHTYTVLICSLCEDSNFDDAKKILNGML 371

Query: 221 GRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDL----GPRPNLLTFNVMIDCLCKG 276
            +G+ P+VV    LI G+C  G    ++   +E+L L       PN  T+N +I   C+G
Sbjct: 372 EKGLIPSVVTYNALIDGYCKKG----LSASALEILSLMESNNCSPNARTYNELILGFCRG 427

Query: 277 GKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSY 336
             I++A  LL  M++R L P+  TYN L+ G C  G + +A ++   M+  G      +Y
Sbjct: 428 KNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDLGSAYKLLSLMNESGLVPDEWTY 487

Query: 337 NILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKL 396
           ++ I+  CK   VEEA SL+  +   G++   + Y+TL+ G  + G+    + L D+M  
Sbjct: 488 SVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLIDGYCKVGKVSDGRFLLDKMLS 547

Query: 397 YNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDN 456
               P+  TYN LIDG CK    +EA  L  ++     E   + +  LID L K    D 
Sbjct: 548 AGCVPNSITYNSLIDGYCKEKNFKEARLLVDIMIKRDIEPAADTYTILIDNLLKDDEFDQ 607

Query: 457 AWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMH 516
           A ++F ++   G  P V  Y+  IH  C  G+L+ A   +  M   G  P+ + +   + 
Sbjct: 608 AHDMFDQMLSTGSHPDVFIYTAFIHAYCSHGRLKDAEVLICKMNAKGIMPDTMLYTLFID 667

Query: 517 GFLQNNKTSKVVELLHKMAE 536
            + +         +L +M E
Sbjct: 668 AYGRFGSIDGAFGILKRMHE 687



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 114/326 (34%), Positives = 174/326 (53%), Gaps = 2/326 (0%)

Query: 245 EEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSL 304
           +E+  +++EMLD    PN+ T N M++  CK G + EA   +  ++Q GL+ D FTY SL
Sbjct: 186 DEMKSVYLEMLDDMVTPNIFTLNTMVNGYCKLGNVVEAELYVSKIVQAGLSLDTFTYTSL 245

Query: 305 MDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGV 364
           + GYC    +D A  IFLSM +KGC    VSY  LI+G+C+   V+EA+ L+ Q+  +  
Sbjct: 246 ILGYCRNKNVDAANAIFLSMPNKGCLRNEVSYTNLIHGFCEARRVDEALKLFSQMHEDNC 305

Query: 365 RQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVK 424
             TV TY  ++  L Q G+   A  +F EM   + +P++ TY +LI  LC+++   +A K
Sbjct: 306 WPTVRTYTVIIFALCQLGRKTEALNMFKEMTEKHCQPNVHTYTVLICSLCEDSNFDDAKK 365

Query: 425 LFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLC 484
           + + +        +  +N LIDG CK G   +A E+   +      P   TY+ +I G C
Sbjct: 366 ILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEILSLMESNNCSPNARTYNELILGFC 425

Query: 485 RKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPD 544
           R   + KA   L  M +    PNVVT+N L+HG  +        +LL  M E    LVPD
Sbjct: 426 RGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDLGSAYKLLSLMNES--GLVPD 483

Query: 545 DTTFSIVVDLLAKDEKYHECSAVSKS 570
           + T+S+ +D L K     E  ++ +S
Sbjct: 484 EWTYSVFIDTLCKRGLVEEARSLFES 509



 Score =  188 bits (477), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 135/543 (24%), Positives = 236/543 (43%), Gaps = 50/543 (9%)

Query: 38  ETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISF 97
           E      +H  C++    ++EA   F  M      P + ++ ++  A+ +       ++ 
Sbjct: 274 EVSYTNLIHGFCEAR--RVDEALKLFSQMHEDNCWPTVRTYTVIIFALCQLGRKTEALNM 331

Query: 98  YRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGT 157
           ++++      P+  T  +LI C       LC ++   +A  +   M+  G+ P V+TY  
Sbjct: 332 FKEMTEKHCQPNVHTYTVLI-C------SLCEDSNFDDAKKILNGMLEKGLIPSVVTYNA 384

Query: 158 LINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFL 217
           LI+G+C+ G  + AL +   M S +         N  +Y+ +I   C+   + KA  L  
Sbjct: 385 LIDGYCKKGLSASALEILSLMESNN------CSPNARTYNELILGFCRGKNIHKAMSLLH 438

Query: 218 EMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGG 277
           +M  R + P VV    LIHG C  G+      L   M + G  P+  T++V ID LCK G
Sbjct: 439 KMLERKLQPNVVTYNILIHGQCKEGDLGSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRG 498

Query: 278 KINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYN 337
            + EA  L E + ++G+  +   Y++L+DGYC VG++   R +   M S GC    ++YN
Sbjct: 499 LVEEARSLFESLKEKGIKANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAGCVPNSITYN 558

Query: 338 ILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLY 397
            LI+GYCK  N +EA  L   +I   +     TY  L+  L +  +   A  +FD+M   
Sbjct: 559 SLIDGYCKEKNFKEARLLVDIMIKRDIEPAADTYTILIDNLLKDDEFDQAHDMFDQMLST 618

Query: 398 NVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNA 457
              PD+  Y   I   C +  +++A  L   +          ++   ID   + G +D A
Sbjct: 619 GSHPDVFIYTAFIHAYCSHGRLKDAEVLICKMNAKGIMPDTMLYTLFIDAYGRFGSIDGA 678

Query: 458 WELFHKLPQKGLVPTVVTYSIMIHGLC-----------------------------RKGK 488
           + +  ++ + G  P+  TYS +I  L                              R+  
Sbjct: 679 FGILKRMHEVGCEPSYYTYSCLIKHLSNAKPKEVSSSSELSDLSSGVASNDFSNCWRRVD 738

Query: 489 LEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAE--PERNLVPDDT 546
            E   D    M ++GCAPN  T+   + G  +       +E+ H++ +   E+   P++ 
Sbjct: 739 YEFTLDLFGKMAEHGCAPNANTYGKFITGLCK----VGCLEVAHRLFDHMKEKGQSPNED 794

Query: 547 TFS 549
            ++
Sbjct: 795 IYN 797



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 143/588 (24%), Positives = 240/588 (40%), Gaps = 133/588 (22%)

Query: 58  EARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILI 117
           EA   F  MT     P + ++ +L  ++ ++ ++D        ++  GL+P  +T N LI
Sbjct: 327 EALNMFKEMTEKHCQPNVHTYTVLICSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALI 386

Query: 118 ----------------------NCFGNKER------GLCVENRIKEATWLFKNMIAFGVR 149
                                 NC  N         G C    I +A  L   M+   ++
Sbjct: 387 DGYCKKGLSASALEILSLMESNNCSPNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQ 446

Query: 150 PDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLV 209
           P+V+TY  LI+G C+ G+L  A +L   M     E+GL+     ++YS+ ID+LCK GLV
Sbjct: 447 PNVVTYNILIHGQCKEGDLGSAYKLLSLM----NESGLVPDE--WTYSVFIDTLCKRGLV 500

Query: 210 DKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVM 269
           ++A+ LF  +K +GI    V+ +TLI G+C  G   +   L  +ML  G  PN +T+N +
Sbjct: 501 EEARSLFESLKEKGIKANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAGCVPNSITYNSL 560

Query: 270 IDCLCKGGKINEANGLLELMIQR-----------------------------------GL 294
           ID  CK     EA  L+++MI+R                                   G 
Sbjct: 561 IDGYCKEKNFKEARLLVDIMIKRDIEPAADTYTILIDNLLKDDEFDQAHDMFDQMLSTGS 620

Query: 295 NPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMS 354
           +PD F Y + +  YC  GR+  A  +   M++KG     + Y + I+ Y +  +++ A  
Sbjct: 621 HPDVFIYTAFIHAYCSHGRLKDAEVLICKMNAKGIMPDTMLYTLFIDAYGRFGSIDGAFG 680

Query: 355 LYRQIISNGVRQTVITYNTLLSGLFQA----------------GQAG------------- 385
           + +++   G   +  TY+ L+  L  A                G A              
Sbjct: 681 ILKRMHEVGCEPSYYTYSCLIKHLSNAKPKEVSSSSELSDLSSGVASNDFSNCWRRVDYE 740

Query: 386 YAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLI 445
           +   LF +M  +   P+ +TY   I GLCK  C++ A +LF  ++        +I+N L+
Sbjct: 741 FTLDLFGKMAEHGCAPNANTYGKFITGLCKVGCLEVAHRLFDHMKEKGQSPNEDIYNSLL 800

Query: 446 DGLCKAGRLDNAWELFHKLPQKGLVPTV-------------------------------- 473
              C+ G    A      + +   +P +                                
Sbjct: 801 GCSCQLGLYGEAIRWLDIMIENRHLPHLDSCKLLLCGLYDEGNDEKAKRVFCSFLQCEYN 860

Query: 474 ---VTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGF 518
              + + ++I GL +KG  +K +D    ME  GC  +  T++ L+ GF
Sbjct: 861 YDEMVWKVLIDGLLKKGLSDKCSDLFGIMETQGCQIHPKTYSMLIEGF 908



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 117/493 (23%), Positives = 200/493 (40%), Gaps = 77/493 (15%)

Query: 55  NLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLN 114
           N+++A      M   +  P + ++N+L     K     +       +   GL+PD  T +
Sbjct: 429 NIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDLGSAYKLLSLMNESGLVPDEWTYS 488

Query: 115 ILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRL 174
           + I+        LC    ++EA  LF+++   G++ + + Y TLI+G+C+ G +S    L
Sbjct: 489 VFIDT-------LCKRGLVEEARSLFESLKEKGIKANEVIYSTLIDGYCKVGKVSDGRFL 541

Query: 175 HKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTL 234
             KM+S     G +   N  +Y+ +ID  CKE    +A+ L   M  R I PA    T L
Sbjct: 542 LDKMLSA----GCVP--NSITYNSLIDGYCKEKNFKEARLLVDIMIKRDIEPAADTYTIL 595

Query: 235 IHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGL 294
           I        +++ + +F +ML  G  P++  +   I   C  G++ +A  L+  M  +G+
Sbjct: 596 IDNLLKDDEFDQAHDMFDQMLSTGSHPDVFIYTAFIHAYCSHGRLKDAEVLICKMNAKGI 655

Query: 295 NPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYC---------- 344
            PD   Y   +D Y   G ID A  I   MH  GC+ +  +Y+ LI              
Sbjct: 656 MPDTMLYTLFIDAYGRFGSIDGAFGILKRMHEVGCEPSYYTYSCLIKHLSNAKPKEVSSS 715

Query: 345 -------------------KILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAG 385
                              + ++ E  + L+ ++  +G      TY   ++GL + G   
Sbjct: 716 SELSDLSSGVASNDFSNCWRRVDYEFTLDLFGKMAEHGCAPNANTYGKFITGLCKVGCLE 775

Query: 386 YAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNK------------ 433
            A +LFD MK     P+   YN L+   C+     EA++   ++  N+            
Sbjct: 776 VAHRLFDHMKEKGQSPNEDIYNSLLGCSCQLGLYGEAIRWLDIMIENRHLPHLDSCKLLL 835

Query: 434 -----------------------FEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLV 470
                                  + +   ++  LIDGL K G  D   +LF  +  +G  
Sbjct: 836 CGLYDEGNDEKAKRVFCSFLQCEYNYDEMVWKVLIDGLLKKGLSDKCSDLFGIMETQGCQ 895

Query: 471 PTVVTYSIMIHGL 483
               TYS++I G 
Sbjct: 896 IHPKTYSMLIEGF 908



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 80/367 (21%), Positives = 137/367 (37%), Gaps = 67/367 (18%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
           N  +   CK    N  EAR     M      P   ++ +L   + K+  +D     + ++
Sbjct: 558 NSLIDGYCKEK--NFKEARLLVDIMIKRDIEPAADTYTILIDNLLKDDEFDQAHDMFDQM 615

Query: 102 VSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLING 161
           +S G  PD       I+ +       C   R+K+A  L   M A G+ PD + Y   I+ 
Sbjct: 616 LSTGSHPDVFIYTAFIHAY-------CSHGRLKDAEVLICKMNAKGIMPDTMLYTLFIDA 668

Query: 162 FCRTGNLSVAL----RLHK------------------------------------KMVSG 181
           + R G++  A     R+H+                                     + S 
Sbjct: 669 YGRFGSIDGAFGILKRMHEVGCEPSYYTYSCLIKHLSNAKPKEVSSSSELSDLSSGVASN 728

Query: 182 DYEN-----------GLISKT-------NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRG 223
           D+ N            L  K        N  +Y   I  LCK G ++ A  LF  MK +G
Sbjct: 729 DFSNCWRRVDYEFTLDLFGKMAEHGCAPNANTYGKFITGLCKVGCLEVAHRLFDHMKEKG 788

Query: 224 INPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEAN 283
            +P   +  +L+   C  G + E       M++    P+L +  +++  L   G   +A 
Sbjct: 789 QSPNEDIYNSLLGCSCQLGLYGEAIRWLDIMIENRHLPHLDSCKLLLCGLYDEGNDEKAK 848

Query: 284 GLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGY 343
            +    +Q   N D   +  L+DG    G  D   ++F  M ++GC+    +Y++LI G+
Sbjct: 849 RVFCSFLQCEYNYDEMVWKVLIDGLLKKGLSDKCSDLFGIMETQGCQIHPKTYSMLIEGF 908

Query: 344 CKILNVE 350
             I  ++
Sbjct: 909 DGIQEID 915


>gi|449459086|ref|XP_004147277.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Cucumis sativus]
 gi|449501214|ref|XP_004161309.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Cucumis sativus]
          Length = 908

 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 146/480 (30%), Positives = 247/480 (51%), Gaps = 17/480 (3%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
           P +  +N +  ++ K    +     +  +   GL P+ +T  ILI+ FG + +       
Sbjct: 363 PNLFVYNSMINSLCKTGKLEEAELLFSVMAERGLNPNDVTYTILIDGFGRRAK------- 415

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
           +  A + F  MI  G+   V +Y ++IN  C+ G + +A  L K+MV    + GL  K  
Sbjct: 416 LDVAFYYFNKMIECGISATVYSYNSMINCQCKFGKMKMAELLFKEMV----DKGL--KPT 469

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
           + +Y+ +I   CK+GLV KA +L+ EM G+GI P  V  T LI G C      E + LF 
Sbjct: 470 VATYTSLISGYCKDGLVPKAFKLYHEMTGKGIAPNTVTFTALICGLCQINKMAEASKLFD 529

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
           EM++L   PN +T+NV+I+  C+ G    A  LL+ MI++GL+PD +TY  L+ G C  G
Sbjct: 530 EMVELKILPNEVTYNVLIEGHCREGNTTRAFELLDEMIKKGLSPDTYTYRPLIAGLCSTG 589

Query: 313 RIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYN 372
           R+  A+E    +H K  +   + Y  L+ G+CK   ++EA+   ++++  G++  +++Y 
Sbjct: 590 RVSEAKEFINDLHHKHQRLDELCYTALLQGFCKEGRIKEALVARQEMVGRGLQMDLVSYA 649

Query: 373 TLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMN 432
            L+SG          + L  EM    ++PD   Y ILIDG  K+  +++A + ++++   
Sbjct: 650 VLISGALNQNDRILFE-LLREMHGKGMQPDNVIYTILIDGFIKSGNLKKAFEFWYIMIGE 708

Query: 433 KFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKA 492
            +      +  L++GL KAG ++ A  LF ++     +P  +TY   +  L ++G +E A
Sbjct: 709 GYVPNSVTYTALVNGLFKAGYVNEAKLLFKRMLVGEAIPNHITYGCFLDHLTKEGNMENA 768

Query: 493 NDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVV 552
                 M + G   N VT+N L+ G+ Q  K  +  +LL  M      +VPD  T+S  +
Sbjct: 769 LQLHNAMLQ-GSFANTVTYNILIRGYCQIGKFQEAAKLLDVMIGI--GMVPDCITYSTFI 825



 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 158/577 (27%), Positives = 253/577 (43%), Gaps = 93/577 (16%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFG-----NKER-- 125
           P + + + L  A+A+ R +  V+  +  LV+ G+ PD     +++ C       NK +  
Sbjct: 188 PEVRTLSALLNALARIRKFRQVLELFDTLVNAGVKPDCYIYTVVVKCLCELKDFNKAKEI 247

Query: 126 ---------------------GLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCR 164
                                GLC   R+ EA  + +++   G++ D++TY TL+ G CR
Sbjct: 248 INQAEGNGCSLSIVTYNVFINGLCKSKRVWEAVEVKRSLGEKGLKADLVTYCTLVLGLCR 307

Query: 165 TGNLSVALRLHKKMVSGDY------ENGLISK-----------------------TNIFS 195
                V + +  +M+   Y       +GLI                          N+F 
Sbjct: 308 IQEFEVGMEMMDEMIELGYVPSEAAVSGLIEGLIKMGSIEGAFELLNKVGKLGVVPNLFV 367

Query: 196 YSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEML 255
           Y+ +I+SLCK G +++A+ LF  M  RG+NP  V  T LI GF      +     F +M+
Sbjct: 368 YNSMINSLCKTGKLEEAELLFSVMAERGLNPNDVTYTILIDGFGRRAKLDVAFYYFNKMI 427

Query: 256 DLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRID 315
           + G    + ++N MI+C CK GK+  A  L + M+ +GL P   TY SL+ GYC  G + 
Sbjct: 428 ECGISATVYSYNSMINCQCKFGKMKMAELLFKEMVDKGLKPTVATYTSLISGYCKDGLVP 487

Query: 316 TAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLL 375
            A +++  M  KG     V++  LI G C+I  + EA  L+ +++   +    +TYN L+
Sbjct: 488 KAFKLYHEMTGKGIAPNTVTFTALICGLCQINKMAEASKLFDEMVELKILPNEVTYNVLI 547

Query: 376 SGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFE 435
            G  + G    A +L DEM    + PD  TY  LI GLC    V EA +  + L      
Sbjct: 548 EGHCREGNTTRAFELLDEMIKKGLSPDTYTYRPLIAGLCSTGRVSEAKEFINDLHHKHQR 607

Query: 436 FGIEIFNCLIDGLCKAGRLDNA----------------------------------WELF 461
                +  L+ G CK GR+  A                                  +EL 
Sbjct: 608 LDELCYTALLQGFCKEGRIKEALVARQEMVGRGLQMDLVSYAVLISGALNQNDRILFELL 667

Query: 462 HKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQN 521
            ++  KG+ P  V Y+I+I G  + G L+KA +F   M   G  PN VT+  L++G  + 
Sbjct: 668 REMHGKGMQPDNVIYTILIDGFIKSGNLKKAFEFWYIMIGEGYVPNSVTYTALVNGLFKA 727

Query: 522 NKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKD 558
              ++   L  +M   E   +P+  T+   +D L K+
Sbjct: 728 GYVNEAKLLFKRMLVGEA--IPNHITYGCFLDHLTKE 762



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 131/488 (26%), Positives = 244/488 (50%), Gaps = 15/488 (3%)

Query: 76  SSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKE 135
           S F++L     +N+     +     +   GLLP+  TL+ L+N        L    + ++
Sbjct: 156 SGFDMLIQHYVQNKRVMDGVLVVNLMRDYGLLPEVRTLSALLN-------ALARIRKFRQ 208

Query: 136 ATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFS 195
              LF  ++  GV+PD   Y  ++   C   + + A    K++++    NG     +I +
Sbjct: 209 VLELFDTLVNAGVKPDCYIYTVVVKCLCELKDFNKA----KEIINQAEGNG--CSLSIVT 262

Query: 196 YSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEML 255
           Y++ I+ LCK   V +A E+   +  +G+   +V   TL+ G C    +E    +  EM+
Sbjct: 263 YNVFINGLCKSKRVWEAVEVKRSLGEKGLKADLVTYCTLVLGLCRIQEFEVGMEMMDEMI 322

Query: 256 DLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRID 315
           +LG  P+    + +I+ L K G I  A  LL  + + G+ P+ F YNS+++  C  G+++
Sbjct: 323 ELGYVPSEAAVSGLIEGLIKMGSIEGAFELLNKVGKLGVVPNLFVYNSMINSLCKTGKLE 382

Query: 316 TAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLL 375
            A  +F  M  +G     V+Y ILI+G+ +   ++ A   + ++I  G+  TV +YN+++
Sbjct: 383 EAELLFSVMAERGLNPNDVTYTILIDGFGRRAKLDVAFYYFNKMIECGISATVYSYNSMI 442

Query: 376 SGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFE 435
           +   + G+   A+ LF EM    ++P ++TY  LI G CK+  V +A KL+H +      
Sbjct: 443 NCQCKFGKMKMAELLFKEMVDKGLKPTVATYTSLISGYCKDGLVPKAFKLYHEMTGKGIA 502

Query: 436 FGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDF 495
                F  LI GLC+  ++  A +LF ++ +  ++P  VTY+++I G CR+G   +A + 
Sbjct: 503 PNTVTFTALICGLCQINKMAEASKLFDEMVELKILPNEVTYNVLIEGHCREGNTTRAFEL 562

Query: 496 LLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLL 555
           L  M K G +P+  T+  L+ G     + S+  E ++ +    + L  D+  ++ ++   
Sbjct: 563 LDEMIKKGLSPDTYTYRPLIAGLCSTGRVSEAKEFINDLHHKHQRL--DELCYTALLQGF 620

Query: 556 AKDEKYHE 563
            K+ +  E
Sbjct: 621 CKEGRIKE 628



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 102/398 (25%), Positives = 160/398 (40%), Gaps = 69/398 (17%)

Query: 53  IINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLT 112
           I  + EA   F  M  ++  P   ++N+L     +  +         +++  GL PD  T
Sbjct: 518 INKMAEASKLFDEMVELKILPNEVTYNVLIEGHCREGNTTRAFELLDEMIKKGLSPDTYT 577

Query: 113 LNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVAL 172
              LI        GLC   R+ EA     ++     R D + Y  L+ GFC+ G +  AL
Sbjct: 578 YRPLI-------AGLCSTGRVSEAKEFINDLHHKHQRLDELCYTALLQGFCKEGRIKEAL 630

Query: 173 RLHKKMVSGDYENGLISKTNIFS----------------------------YSIIIDSLC 204
              ++MV    +  L+S   + S                            Y+I+ID   
Sbjct: 631 VARQEMVGRGLQMDLVSYAVLISGALNQNDRILFELLREMHGKGMQPDNVIYTILIDGFI 690

Query: 205 KEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLD-------- 256
           K G + KA E +  M G G  P  V  T L++G   AG   E   LF  ML         
Sbjct: 691 KSGNLKKAFEFWYIMIGEGYVPNSVTYTALVNGLFKAGYVNEAKLLFKRMLVGEAIPNHI 750

Query: 257 --------------------------LGPRPNLLTFNVMIDCLCKGGKINEANGLLELMI 290
                                      G   N +T+N++I   C+ GK  EA  LL++MI
Sbjct: 751 TYGCFLDHLTKEGNMENALQLHNAMLQGSFANTVTYNILIRGYCQIGKFQEAAKLLDVMI 810

Query: 291 QRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVE 350
             G+ PD  TY++ +  YC  G +D A +++  M  +G K   V +N LI+  C    ++
Sbjct: 811 GIGMVPDCITYSTFIYEYCKRGNVDAAMDMWECMLQRGLKPDRVVFNFLIHACCLNGELD 870

Query: 351 EAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQ 388
            A+ L   ++  G++ T  TY++L+  L Q  +    Q
Sbjct: 871 RALQLRNDMMLRGLKPTQSTYHSLMVQLAQRARLTQVQ 908



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 74/313 (23%), Positives = 130/313 (41%), Gaps = 40/313 (12%)

Query: 319 EIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGL 378
           E F   + K    +   +++LI  Y +   V + + +   +   G+   V T + LL+ L
Sbjct: 141 ENFFESYKKYKFSSSSGFDMLIQHYVQNKRVMDGVLVVNLMRDYGLLPEVRTLSALLNAL 200

Query: 379 FQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGI 438
            +  +     +LFD +    V+PD   Y +++  LC+     +A ++ +  E N     I
Sbjct: 201 ARIRKFRQVLELFDTLVNAGVKPDCYIYTVVVKCLCELKDFNKAKEIINQAEGNGCSLSI 260

Query: 439 EIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCR------------- 485
             +N  I+GLCK+ R+  A E+   L +KGL   +VTY  ++ GLCR             
Sbjct: 261 VTYNVFINGLCKSKRVWEAVEVKRSLGEKGLKADLVTYCTLVLGLCRIQEFEVGMEMMDE 320

Query: 486 ----------------------KGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNK 523
                                  G +E A + L  + K G  PN+  +N++++   +  K
Sbjct: 321 MIELGYVPSEAAVSGLIEGLIKMGSIEGAFELLNKVGKLGVVPNLFVYNSMINSLCKTGK 380

Query: 524 TSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKSSYRACLYVTIFQP 583
             +   L   MA  ER L P+D T++I++D   +  K               +  T++  
Sbjct: 381 LEEAELLFSVMA--ERGLNPNDVTYTILIDGFGRRAKLDVAFYYFNKMIECGISATVY-- 436

Query: 584 SSLGSMIGCTVRL 596
            S  SMI C  + 
Sbjct: 437 -SYNSMINCQCKF 448


>gi|255539805|ref|XP_002510967.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223550082|gb|EEF51569.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 774

 Score =  225 bits (574), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 149/481 (30%), Positives = 235/481 (48%), Gaps = 33/481 (6%)

Query: 66  MTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKER 125
           MT     P    +  L  A++K    +  +    ++  +G LPD  T N +I        
Sbjct: 234 MTKHGCVPNSVVYQTLIHALSKRDRVNEALKLLEEMFLMGCLPDVDTFNDVI-------Y 286

Query: 126 GLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKK-------- 177
           GLC  NRI E   L   M+  G  P+ ITYG L+NG CR G +  A  L  K        
Sbjct: 287 GLCRLNRIHEGAKLVDRMLFRGFTPNDITYGVLMNGLCRVGKVDEAQVLLNKVPTPNDVH 346

Query: 178 ---MVSGDYENGLISKTN---------------IFSYSIIIDSLCKEGLVDKAKELFLEM 219
              +++G  ++G + + N               +F+++ +I  LCK+GL+  A ++  +M
Sbjct: 347 FTILINGYVKSGRLDEANAFLYDKMIKNGCRPDVFTFNTLIHGLCKKGLMGSAVDMVNDM 406

Query: 220 KGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKI 279
              G  P ++  TTL+ GFC     EE   +  EM   G   N++ +NV++  LCK GK+
Sbjct: 407 SANGCTPNLITYTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNGKV 466

Query: 280 NEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNIL 339
            +A  +L  M  +G  PD FT+N+L+ G C V R + A  ++  M   G     V+YN L
Sbjct: 467 PKALDMLGEMSDKGCKPDIFTFNTLIFGLCKVDRKEDALALYRDMLLDGVIANTVTYNTL 526

Query: 340 INGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNV 399
           I+ + +   ++EA+ L   ++  G     ITYN L+    + G    A  LFDEM   ++
Sbjct: 527 IHAFLRGGAIQEALKLVNDMLFRGCPLDEITYNGLIKAFCKLGATEKALGLFDEMVRKDL 586

Query: 400 EPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWE 459
            P   + N+LI+GLC+   V  A++L   +        +  +N LI+GLCK G +  A+ 
Sbjct: 587 VPSNISCNLLINGLCRVGKVCNALELLRDMIHRGLAPDVVTYNSLINGLCKMGNIREAFN 646

Query: 460 LFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFL 519
           LF+KL  +G+ P  +TY+ +I   CR G  + A   LL   +N   PN VT+  L+  F+
Sbjct: 647 LFNKLQAEGIQPDAITYNTLICWHCRAGMFDDAYLLLLRGVENAFIPNDVTWYILVSNFI 706

Query: 520 Q 520
           +
Sbjct: 707 K 707



 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 137/481 (28%), Positives = 242/481 (50%), Gaps = 20/481 (4%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
           P + +F ++  A+      D   S  R +   G +P+ +    LI+    ++R       
Sbjct: 206 PTVYTFGVVMKALCMVNEVDNACSLLRDMTKHGCVPNSVVYQTLIHALSKRDR------- 258

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
           + EA  L + M   G  PDV T+  +I G CR   +    +L  +M+   +        N
Sbjct: 259 VNEALKLLEEMFLMGCLPDVDTFNDVIYGLCRLNRIHEGAKLVDRMLFRGF------TPN 312

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNG-LF 251
             +Y ++++ LC+ G VD+A+ L  ++      P  V  T LI+G+  +G  +E N  L+
Sbjct: 313 DITYGVLMNGLCRVGKVDEAQVLLNKVP----TPNDVHFTILINGYVKSGRLDEANAFLY 368

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
            +M+  G RP++ TFN +I  LCK G +  A  ++  M   G  P+  TY +L+DG+C  
Sbjct: 369 DKMIKNGCRPDVFTFNTLIHGLCKKGLMGSAVDMVNDMSANGCTPNLITYTTLLDGFCKK 428

Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
            +++ A  +   M +KG +  ++ YN+L+   CK   V +A+ +  ++   G +  + T+
Sbjct: 429 NQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNGKVPKALDMLGEMSDKGCKPDIFTF 488

Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
           NTL+ GL +  +   A  L+ +M L  V  +  TYN LI    +   +QEA+KL + +  
Sbjct: 489 NTLIFGLCKVDRKEDALALYRDMLLDGVIANTVTYNTLIHAFLRGGAIQEALKLVNDMLF 548

Query: 432 NKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEK 491
                    +N LI   CK G  + A  LF ++ +K LVP+ ++ +++I+GLCR GK+  
Sbjct: 549 RGCPLDEITYNGLIKAFCKLGATEKALGLFDEMVRKDLVPSNISCNLLINGLCRVGKVCN 608

Query: 492 ANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIV 551
           A + L  M   G AP+VVT+N+L++G  +     +   L +K+      + PD  T++ +
Sbjct: 609 ALELLRDMIHRGLAPDVVTYNSLINGLCKMGNIREAFNLFNKLQ--AEGIQPDAITYNTL 666

Query: 552 V 552
           +
Sbjct: 667 I 667



 Score = 95.5 bits (236), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 70/258 (27%), Positives = 123/258 (47%), Gaps = 8/258 (3%)

Query: 314 IDTAREIFLSMHS-KGCKHTVVSYNILIN--GYCKILNVEEAMSLYRQIISNGVRQTVIT 370
           + T+  IF    S KG  HT   Y++LI+  G  K   V + + L  QI   G+      
Sbjct: 82  VSTSMAIFQWAGSQKGYCHTFDVYHVLIDKLGAAKEFKVIDKLLL--QIKEEGIAFRESL 139

Query: 371 YNTLLSGLFQAGQAGYAQKLFDEMK-LYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHML 429
           +  ++    +A   G A ++  +MK +Y  EP   +YN+++D L   NC   A  +F+ +
Sbjct: 140 FICIMKYYGRANLPGQATRMLLDMKGVYCCEPTFKSYNVVLDILVSANCPSVAANVFYEM 199

Query: 430 EMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKL 489
                   +  F  ++  LC    +DNA  L   + + G VP  V Y  +IH L ++ ++
Sbjct: 200 LSKGVIPTVYTFGVVMKALCMVNEVDNACSLLRDMTKHGCVPNSVVYQTLIHALSKRDRV 259

Query: 490 EKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFS 549
            +A   L  M   GC P+V TFN +++G  + N+  +  +L+ +M    R   P+D T+ 
Sbjct: 260 NEALKLLEEMFLMGCLPDVDTFNDVIYGLCRLNRIHEGAKLVDRML--FRGFTPNDITYG 317

Query: 550 IVVDLLAKDEKYHECSAV 567
           ++++ L +  K  E   +
Sbjct: 318 VLMNGLCRVGKVDEAQVL 335


>gi|242047600|ref|XP_002461546.1| hypothetical protein SORBIDRAFT_02g004520 [Sorghum bicolor]
 gi|241924923|gb|EER98067.1| hypothetical protein SORBIDRAFT_02g004520 [Sorghum bicolor]
          Length = 532

 Score =  225 bits (574), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 155/523 (29%), Positives = 247/523 (47%), Gaps = 67/523 (12%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           C +G +NL  A       T ++ +  ++   LL    AK R  DA+    R++  +G  P
Sbjct: 24  CDAGCLNLGFAALGQIIKTGLR-ADAVAFTPLLRTLCAKKRTSDAMNIVLRRMPELGCTP 82

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFG--VRPDVITYGTLINGFCRTG 166
           D  + + L+       +GLC E + +EA  L   M   G    PDV++Y T+I+GF + G
Sbjct: 83  DVFSYSTLL-------KGLCAEKKCEEAAELIHMMAEDGDNCPPDVVSYSTVIHGFFKEG 135

Query: 167 NLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINP 226
           ++  A  L  KM+    ++G+    N+ + + +ID LCK   +DKA+ +  +M    I P
Sbjct: 136 DVGKAYTLFCKML----DHGI--PPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMP 189

Query: 227 AVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLL 286
                 +LIHG+  +G W E   +  EM   G RPN++T+N++IDCLCK G   EA  + 
Sbjct: 190 NCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYNMLIDCLCKSGFHAEAREIF 249

Query: 287 ELMIQRGLNPDRFTYNSLMDG-----------------------------------YCLV 311
             MIQ G  PD  TY SL+ G                                   YC  
Sbjct: 250 NSMIQSGPKPDATTYGSLLHGYATEGNLVEMNNVKDLMVQNGMRSNHHTFSIEIYAYCKC 309

Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
           GR+D A   F+ M   G    +V+Y  +I+G CKI  +++AMS + Q+I +G+   +IT+
Sbjct: 310 GRLDEASLTFIKMQQLGFMPDIVTYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPNIITF 369

Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
            TL+ G    G+   A++LF EM    + PD++ +  +ID L K   V EA KLF ++  
Sbjct: 370 TTLIHGFSMYGKWEKAEELFYEMMDRGIPPDVTIFTAMIDRLFKEGKVTEAQKLFDLMPR 429

Query: 432 NKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEK 491
              +  +  +N +I G   AG +    +L   +   GL PT VT++ ++ G         
Sbjct: 430 AGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKPTAVTFNTLLDG--------- 480

Query: 492 ANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKM 534
                  M   G  P+V T  TL+    ++ +   ++ L  +M
Sbjct: 481 -------MVSMGLKPDVDTCKTLIDSCCEDGRIEDILTLFREM 516



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 144/483 (29%), Positives = 230/483 (47%), Gaps = 14/483 (2%)

Query: 72  SPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVEN 131
           +P I++F +L          +   +   +++  GL  D +    L+       R LC + 
Sbjct: 10  APDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRADAVAFTPLL-------RTLCAKK 62

Query: 132 RIKEA-TWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISK 190
           R  +A   + + M   G  PDV +Y TL+ G C       A  L   M     E+G    
Sbjct: 63  RTSDAMNIVLRRMPELGCTPDVFSYSTLLKGLCAEKKCEEAAELIHMMA----EDGDNCP 118

Query: 191 TNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGL 250
            ++ SYS +I    KEG V KA  LF +M   GI P VV C ++I G C     ++   +
Sbjct: 119 PDVVSYSTVIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAV 178

Query: 251 FIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCL 310
             +M+D    PN  T+N +I      G+  EA  +L+ M + G  P+  TYN L+D  C 
Sbjct: 179 LQQMIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYNMLIDCLCK 238

Query: 311 VGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVIT 370
            G    AREIF SM   G K    +Y  L++GY    N+ E  ++   ++ NG+R    T
Sbjct: 239 SGFHAEAREIFNSMIQSGPKPDATTYGSLLHGYATEGNLVEMNNVKDLMVQNGMRSNHHT 298

Query: 371 YNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLE 430
           ++  +    + G+   A   F +M+     PD+ TY  +IDGLCK   + +A+  F  + 
Sbjct: 299 FSIEIYAYCKCGRLDEASLTFIKMQQLGFMPDIVTYTTVIDGLCKIGRLDDAMSRFCQMI 358

Query: 431 MNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLE 490
            +     I  F  LI G    G+ + A ELF+++  +G+ P V  ++ MI  L ++GK+ 
Sbjct: 359 DDGLSPNIITFTTLIHGFSMYGKWEKAEELFYEMMDRGIPPDVTIFTAMIDRLFKEGKVT 418

Query: 491 KANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSI 550
           +A      M + G  PNVV++NT++HG+    +  +V++LL  M      L P   TF+ 
Sbjct: 419 EAQKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDML--LIGLKPTAVTFNT 476

Query: 551 VVD 553
           ++D
Sbjct: 477 LLD 479



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 132/437 (30%), Positives = 206/437 (47%), Gaps = 34/437 (7%)

Query: 148 VRPDVITYGTLINGFCRTGNLSVAL-----------------------RLHKKMVSGDYE 184
           V PD+ T+G LI+  C  G L++                          L  K  + D  
Sbjct: 9   VAPDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRADAVAFTPLLRTLCAKKRTSDAM 68

Query: 185 NGLISK-------TNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGIN--PAVVVCTTLI 235
           N ++ +        ++FSYS ++  LC E   ++A EL   M   G N  P VV  +T+I
Sbjct: 69  NIVLRRMPELGCTPDVFSYSTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPDVVSYSTVI 128

Query: 236 HGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLN 295
           HGF   G+  +   LF +MLD G  PN++T N +ID LCK   +++A  +L+ MI   + 
Sbjct: 129 HGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIM 188

Query: 296 PDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSL 355
           P+  TYNSL+ GY   G+   A  I   M   G +  VV+YN+LI+  CK     EA  +
Sbjct: 189 PNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYNMLIDCLCKSGFHAEAREI 248

Query: 356 YRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCK 415
           +  +I +G +    TY +LL G    G       + D M    +  +  T++I I   CK
Sbjct: 249 FNSMIQSGPKPDATTYGSLLHGYATEGNLVEMNNVKDLMVQNGMRSNHHTFSIEIYAYCK 308

Query: 416 NNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVT 475
              + EA   F  ++   F   I  +  +IDGLCK GRLD+A   F ++   GL P ++T
Sbjct: 309 CGRLDEASLTFIKMQQLGFMPDIVTYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPNIIT 368

Query: 476 YSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMA 535
           ++ +IHG    GK EKA +    M   G  P+V  F  ++    +  K ++  +L   M 
Sbjct: 369 FTTLIHGFSMYGKWEKAEELFYEMMDRGIPPDVTIFTAMIDRLFKEGKVTEAQKLFDLM- 427

Query: 536 EPERNLVPDDTTFSIVV 552
            P     P+  +++ ++
Sbjct: 428 -PRAGAKPNVVSYNTMI 443



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 91/309 (29%), Positives = 137/309 (44%), Gaps = 34/309 (11%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CKSG     EAR  F  M    P P  +++  L    A   +   + +    +V  G+  
Sbjct: 237 CKSGF--HAEAREIFNSMIQSGPKPDATTYGSLLHGYATEGNLVEMNNVKDLMVQNGMRS 294

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           +  T +I I  +       C   R+ EA+  F  M   G  PD++TY T+I+G C+ G L
Sbjct: 295 NHHTFSIEIYAY-------CKCGRLDEASLTFIKMQQLGFMPDIVTYTTVIDGLCKIGRL 347

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
             A+    +M+    ++GL    NI +++ +I      G  +KA+ELF EM  RGI P V
Sbjct: 348 DDAMSRFCQMI----DDGL--SPNIITFTTLIHGFSMYGKWEKAEELFYEMMDRGIPPDV 401

Query: 229 VVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEA------ 282
            + T +I      G   E   LF  M   G +PN++++N MI      G++ E       
Sbjct: 402 TIFTAMIDRLFKEGKVTEAQKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDD 461

Query: 283 -------------NGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGC 329
                        N LL+ M+  GL PD  T  +L+D  C  GRI+    +F  M  K  
Sbjct: 462 MLLIGLKPTAVTFNTLLDGMVSMGLKPDVDTCKTLIDSCCEDGRIEDILTLFREMLGKAD 521

Query: 330 KHTVVSYNI 338
           K   ++ NI
Sbjct: 522 KTDTITENI 530



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 61/237 (25%), Positives = 103/237 (43%), Gaps = 22/237 (9%)

Query: 45  LHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSI 104
           ++  CK G   L+EA   F  M  +   P I ++  +   + K    D  +S + +++  
Sbjct: 303 IYAYCKCG--RLDEASLTFIKMQQLGFMPDIVTYTTVIDGLCKIGRLDDAMSRFCQMIDD 360

Query: 105 GLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCR 164
           GL P+ +T   LI+       G  +  + ++A  LF  M+  G+ PDV  +  +I+   +
Sbjct: 361 GLSPNIITFTTLIH-------GFSMYGKWEKAEELFYEMMDRGIPPDVTIFTAMIDRLFK 413

Query: 165 TGNLSVALRLHKKMVSGDYENGLIS-KTNIFSYSI---------IIDSLCKEGLVDKA-- 212
            G ++ A +L   M     +  ++S  T I  Y I         ++D +   GL   A  
Sbjct: 414 EGKVTEAQKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKPTAVT 473

Query: 213 -KELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNV 268
              L   M   G+ P V  C TLI   C  G  E++  LF EML    + + +T N+
Sbjct: 474 FNTLLDGMVSMGLKPDVDTCKTLIDSCCEDGRIEDILTLFREMLGKADKTDTITENI 530


>gi|357473969|ref|XP_003607269.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein-like
           protein [Medicago truncatula]
 gi|355508324|gb|AES89466.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein-like
           protein [Medicago truncatula]
          Length = 970

 Score =  225 bits (574), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 142/490 (28%), Positives = 239/490 (48%), Gaps = 22/490 (4%)

Query: 63  FGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGN 122
           FG++      P +  +N L  A+ K    D     Y+ + S+ L  + +T +ILI+ F  
Sbjct: 352 FGFL------PNLFVYNALINALCKGEDLDKAELLYKNMHSMNLPLNDVTYSILIDSF-- 403

Query: 123 KERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGD 182
                C    +  A   F  MI  G+R  +  Y +LING C+ G+LS A  L+ KM++  
Sbjct: 404 -----CKRGMLDVAESYFGRMIEDGIRETIYPYNSLINGHCKFGDLSAAEFLYTKMINEG 458

Query: 183 YENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAG 242
            E          +++ +I   CK+  V+KA +L+ EM  + I P+V   T LI+G C   
Sbjct: 459 LE------PTATTFTTLISGYCKDLQVEKAFKLYREMNEKEIAPSVYTFTALIYGLCSTN 512

Query: 243 NWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYN 302
              E + LF EM++   +P  +T+NVMI+  CK   +++A  LLE M+  GL PD +TY 
Sbjct: 513 EMAEASKLFDEMVERKIKPTEVTYNVMIEGYCKAHNMDKAFELLEDMLHNGLVPDTYTYR 572

Query: 303 SLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISN 362
            L+ G C  GR+  A++    +H K  K   + Y+ L++GYC    + EA+S   ++I  
Sbjct: 573 PLISGLCSTGRVSAAKDFIDDLHKKNLKLNEMCYSALLHGYCGQGRLTEALSASCEMIQR 632

Query: 363 GVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEA 422
           G+   ++ +  L+ G  +         L  +M    + PD   Y  +ID   K    +++
Sbjct: 633 GINMDLVCHAVLIDGAMKQQDMKRLFGLLKKMYDQGLRPDSVIYTSMIDAYSKEGSFKKS 692

Query: 423 VKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHG 482
            +   ++   K    +  +   ++GLCK G +D A  LF K+    + P  VTY   +  
Sbjct: 693 GECLDLMVTEKCFPNVVTYTAFMNGLCKVGEIDRAGHLFEKMLTANISPNSVTYGCFLDS 752

Query: 483 LCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLV 542
           L ++G +++A D    M K G   N  T+N L+ GF +  +  +  ++L +M   E  + 
Sbjct: 753 LTKEGNMKEATDLHHEMLK-GLLANTATYNILIRGFCKLGRLIEATKVLSEMT--ENGIF 809

Query: 543 PDDTTFSIVV 552
           PD  T+S ++
Sbjct: 810 PDCITYSTII 819



 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 145/504 (28%), Positives = 238/504 (47%), Gaps = 23/504 (4%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVEN- 131
           P + + + +   + + R +  V   + + V+ G+ PD  T + +I       R LC    
Sbjct: 181 PEVRTLSAILNGLLRIRKFILVWEVFDESVNAGVKPDPYTCSAVI-------RSLCELKD 233

Query: 132 --RIKEAT-WLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLI 188
             R KE   W+  N     +    +TY  LI+G C+ G +  AL + K +     E GL 
Sbjct: 234 FCRAKEKILWMESNRFDLSI----VTYNVLIHGLCKGGGVLEALEVRKSL----REKGL- 284

Query: 189 SKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVN 248
            K ++ +Y  ++   C+    D    L  EM   G  P     + L+ G    GN +   
Sbjct: 285 -KEDVVTYCTLVLGFCRVQQFDDGICLMNEMVELGFVPTEAAVSGLVDGLRKKGNIDSAY 343

Query: 249 GLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGY 308
            L +++   G  PNL  +N +I+ LCKG  +++A  L + M    L  +  TY+ L+D +
Sbjct: 344 DLVVKLGRFGFLPNLFVYNALINALCKGEDLDKAELLYKNMHSMNLPLNDVTYSILIDSF 403

Query: 309 CLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTV 368
           C  G +D A   F  M   G + T+  YN LING+CK  ++  A  LY ++I+ G+  T 
Sbjct: 404 CKRGMLDVAESYFGRMIEDGIRETIYPYNSLINGHCKFGDLSAAEFLYTKMINEGLEPTA 463

Query: 369 ITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHM 428
            T+ TL+SG  +  Q   A KL+ EM    + P + T+  LI GLC  N + EA KLF  
Sbjct: 464 TTFTTLISGYCKDLQVEKAFKLYREMNEKEIAPSVYTFTALIYGLCSTNEMAEASKLFDE 523

Query: 429 LEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGK 488
           +   K +     +N +I+G CKA  +D A+EL   +   GLVP   TY  +I GLC  G+
Sbjct: 524 MVERKIKPTEVTYNVMIEGYCKAHNMDKAFELLEDMLHNGLVPDTYTYRPLISGLCSTGR 583

Query: 489 LEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTF 548
           +  A DF+  + K     N + ++ L+HG+    + ++ +    +M   +R +  D    
Sbjct: 584 VSAAKDFIDDLHKKNLKLNEMCYSALLHGYCGQGRLTEALSASCEMI--QRGINMDLVCH 641

Query: 549 SIVVDLLAKDEKYHECSAVSKSSY 572
           ++++D   K +       + K  Y
Sbjct: 642 AVLIDGAMKQQDMKRLFGLLKKMY 665



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 138/502 (27%), Positives = 229/502 (45%), Gaps = 25/502 (4%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
           N  ++ +CK G  +L+ A + +  M +    P  ++F  L     K+   +     YR++
Sbjct: 432 NSLINGHCKFG--DLSAAEFLYTKMINEGLEPTATTFTTLISGYCKDLQVEKAFKLYREM 489

Query: 102 VSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLING 161
               + P   T   LI        GLC  N + EA+ LF  M+   ++P  +TY  +I G
Sbjct: 490 NEKEIAPSVYTFTALI-------YGLCSTNEMAEASKLFDEMVERKIKPTEVTYNVMIEG 542

Query: 162 FCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKG 221
           +C+  N+  A  L + M+     NGL+  T  ++Y  +I  LC  G V  AK+   ++  
Sbjct: 543 YCKAHNMDKAFELLEDML----HNGLVPDT--YTYRPLISGLCSTGRVSAAKDFIDDLHK 596

Query: 222 RGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINE 281
           + +    +  + L+HG+C  G   E      EM+  G   +L+   V+ID   K   +  
Sbjct: 597 KNLKLNEMCYSALLHGYCGQGRLTEALSASCEMIQRGINMDLVCHAVLIDGAMKQQDMKR 656

Query: 282 ANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILIN 341
             GLL+ M  +GL PD   Y S++D Y   G    + E    M ++ C   VV+Y   +N
Sbjct: 657 LFGLLKKMYDQGLRPDSVIYTSMIDAYSKEGSFKKSGECLDLMVTEKCFPNVVTYTAFMN 716

Query: 342 GYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEP 401
           G CK+  ++ A  L+ ++++  +    +TY   L  L + G    A  L  EM L  +  
Sbjct: 717 GLCKVGEIDRAGHLFEKMLTANISPNSVTYGCFLDSLTKEGNMKEATDLHHEM-LKGLLA 775

Query: 402 DLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELF 461
           + +TYNILI G CK   + EA K+   +  N        ++ +I   C++G +  A EL+
Sbjct: 776 NTATYNILIRGFCKLGRLIEATKVLSEMTENGIFPDCITYSTIIYEHCRSGDVGAAVELW 835

Query: 462 HKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVV---------TFN 512
             + +KG+ P  V ++++I+G C  G L+KA +    M   G  P  +           N
Sbjct: 836 DTMLRKGVEPDSVAFNLLIYGCCVNGALDKAFELRNDMLSRGLKPRQILQLQKRDLGVCN 895

Query: 513 TLMHGFLQNNKTSKVVELLHKM 534
            LMHG     +    + L H M
Sbjct: 896 FLMHGGCVTGEVDTALRLYHSM 917



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 86/329 (26%), Positives = 146/329 (44%), Gaps = 57/329 (17%)

Query: 265 TFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSM 324
           +F +++  L +      AN LL  ++ RG +P +F +                 E FL  
Sbjct: 98  SFAILVHALVQNKLFWPANSLLHTLLLRGSDP-KFVF-----------------EKFLES 139

Query: 325 HSKGCK-HTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQ 383
           H K CK  + + ++ L++ Y +   V +A+ + R ++ N +   V T + +L+GL +  +
Sbjct: 140 H-KQCKFSSTLGFDFLVHSYLQNTRVFDAVVVLRLMLGNTLLPEVRTLSAILNGLLRIRK 198

Query: 384 AGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNC 443
                ++FDE     V+PD  T + +I  LC+      A +    +E N+F+  I  +N 
Sbjct: 199 FILVWEVFDESVNAGVKPDPYTCSAVIRSLCELKDFCRAKEKILWMESNRFDLSIVTYNV 258

Query: 444 LIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCR------------------ 485
           LI GLCK G +  A E+   L +KGL   VVTY  ++ G CR                  
Sbjct: 259 LIHGLCKGGGVLEALEVRKSLREKGLKEDVVTYCTLVLGFCRVQQFDDGICLMNEMVELG 318

Query: 486 -----------------KGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVV 528
                            KG ++ A D ++ + + G  PN+  +N L++   +     K  
Sbjct: 319 FVPTEAAVSGLVDGLRKKGNIDSAYDLVVKLGRFGFLPNLFVYNALINALCKGEDLDK-A 377

Query: 529 ELLHKMAEPERNLVPDDTTFSIVVDLLAK 557
           ELL+K      NL  +D T+SI++D   K
Sbjct: 378 ELLYKNMHS-MNLPLNDVTYSILIDSFCK 405


>gi|326493766|dbj|BAJ85345.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 671

 Score =  225 bits (574), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 136/473 (28%), Positives = 236/473 (49%), Gaps = 27/473 (5%)

Query: 101 LVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLIN 160
           + S+ + PD  T N ++        GLC   + ++A  L   M+     P+ +T+ T I 
Sbjct: 203 IASMPVAPDTYTYNTVL-------MGLCGARQWEDAEALMAEMVRNHCPPNEVTFATQIR 255

Query: 161 GFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMK 220
            FC+ G L  A++L  +M             ++  YS +++   ++G VD A EL   + 
Sbjct: 256 AFCQNGLLDRAVQLLDRMPQYG------CTPDVVIYSTLVNGFSEQGRVDDAIEL---LN 306

Query: 221 GRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKIN 280
           G    P  +     + G C A  WE+V  L +EM+     PN  TF+++  CLC+ G ++
Sbjct: 307 GMLCKPNTICYNAALKGLCIAQRWEDVGQLIVEMVRKDCLPNEATFSMLTSCLCQNGLVD 366

Query: 281 EANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILI 340
            A  +LE M + G  PD   YN+L+  +   GR+D A ++  SM    C   V+S+N  +
Sbjct: 367 CAMEVLEQMHKYGCRPDAVIYNTLIYSFSEQGRVDDALKLLNSMP---CSPDVISFNAAL 423

Query: 341 NGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVE 400
            G C+    ++A  L  Q++        +T+N L+  L Q G+   A ++F++M  Y   
Sbjct: 424 KGLCRAERWDDAEELIVQMLREDCPLIEMTFNILIDSLCQNGRVNNAIEVFEQMPKYGCT 483

Query: 401 PDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWEL 460
           PD+ TY+ LI+GL +   V+ A++LF  +      FG   +N ++ GLC+A R ++A EL
Sbjct: 484 PDIVTYSSLINGLSEQGLVESAIELFQSMPCKPDIFG---YNAVLKGLCRAARWEDAGEL 540

Query: 461 FHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQ 520
              + +K   P  +T++I+I+ LC+KG +++A +    M K G  P++ T+N L++GF +
Sbjct: 541 ISNMARKDCPPNEITFNILINSLCQKGLVDRAIEVFEQMPKYGSTPDIFTYNALINGFSE 600

Query: 521 NNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKSSYR 573
             +      LL  M+       PD  +++  +  L + E++ E   V     R
Sbjct: 601 QGRLDDARRLLSTMS-----CKPDAVSYNSALKGLCRAERWKEAEEVVAEMLR 648



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 140/505 (27%), Positives = 238/505 (47%), Gaps = 53/505 (10%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           C+SG   L +A      +  M  +P   ++N +   +   R ++   +   ++V     P
Sbjct: 191 CRSG--RLADA---LALIASMPVAPDTYTYNTVLMGLCGARQWEDAEALMAEMVRNHCPP 245

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           + +T       F  + R  C    +  A  L   M  +G  PDV+ Y TL+NGF   G +
Sbjct: 246 NEVT-------FATQIRAFCQNGLLDRAVQLLDRMPQYGCTPDVVIYSTLVNGFSEQGRV 298

Query: 169 SVALRLHKKM-----------------VSGDYEN------GLISK---TNIFSYSIIIDS 202
             A+ L   M                 ++  +E+       ++ K    N  ++S++   
Sbjct: 299 DDAIELLNGMLCKPNTICYNAALKGLCIAQRWEDVGQLIVEMVRKDCLPNEATFSMLTSC 358

Query: 203 LCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGP-RP 261
           LC+ GLVD A E+  +M   G  P  V+  TLI+ F   G  ++     +++L+  P  P
Sbjct: 359 LCQNGLVDCAMEVLEQMHKYGCRPDAVIYNTLIYSFSEQGRVDDA----LKLLNSMPCSP 414

Query: 262 NLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIF 321
           ++++FN  +  LC+  + ++A  L+  M++        T+N L+D  C  GR++ A E+F
Sbjct: 415 DVISFNAALKGLCRAERWDDAEELIVQMLREDCPLIEMTFNILIDSLCQNGRVNNAIEVF 474

Query: 322 LSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQA 381
             M   GC   +V+Y+ LING  +   VE A+ L++   S   +  +  YN +L GL +A
Sbjct: 475 EQMPKYGCTPDIVTYSSLINGLSEQGLVESAIELFQ---SMPCKPDIFGYNAVLKGLCRA 531

Query: 382 GQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIF 441
            +   A +L   M   +  P+  T+NILI+ LC+   V  A+++F   +M K+    +IF
Sbjct: 532 ARWEDAGELISNMARKDCPPNEITFNILINSLCQKGLVDRAIEVFE--QMPKYGSTPDIF 589

Query: 442 --NCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYM 499
             N LI+G  + GRLD+A  L   +  K   P  V+Y+  + GLCR  + ++A + +  M
Sbjct: 590 TYNALINGFSEQGRLDDARRLLSTMSCK---PDAVSYNSALKGLCRAERWKEAEEVVAEM 646

Query: 500 EKNGCAPNVVTFNTLMHGFLQNNKT 524
            +  C PN VTF      F+ N  T
Sbjct: 647 LRMKCPPNEVTFKYANRLFVPNGVT 671



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 96/400 (24%), Positives = 182/400 (45%), Gaps = 48/400 (12%)

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
           + + +I+I  LC +  +  A+ +   +K  G    V    TL+ G+C  G   +   L  
Sbjct: 112 VVACNILIKKLCAQRRLADAERVLDALKAAGAADPVSH-NTLVAGYCRDGRLADAERLLA 170

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDG----- 307
                G   N++T+  +I+  C+ G++ +A   L L+    + PD +TYN+++ G     
Sbjct: 171 AAGLSGAA-NVVTYTTLINGYCRSGRLADA---LALIASMPVAPDTYTYNTVLMGLCGAR 226

Query: 308 ------------------------------YCLVGRIDTAREIFLSMHSKGCKHTVVSYN 337
                                         +C  G +D A ++   M   GC   VV Y+
Sbjct: 227 QWEDAEALMAEMVRNHCPPNEVTFATQIRAFCQNGLLDRAVQLLDRMPQYGCTPDVVIYS 286

Query: 338 ILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLY 397
            L+NG+ +   V++A+ L   ++    +   I YN  L GL  A +     +L  EM   
Sbjct: 287 TLVNGFSEQGRVDDAIELLNGML---CKPNTICYNAALKGLCIAQRWEDVGQLIVEMVRK 343

Query: 398 NVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNA 457
           +  P+ +T+++L   LC+N  V  A+++   +          I+N LI    + GR+D+A
Sbjct: 344 DCLPNEATFSMLTSCLCQNGLVDCAMEVLEQMHKYGCRPDAVIYNTLIYSFSEQGRVDDA 403

Query: 458 WELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHG 517
            +L + +P     P V++++  + GLCR  + + A + ++ M +  C    +TFN L+  
Sbjct: 404 LKLLNSMP---CSPDVISFNAALKGLCRAERWDDAEELIVQMLREDCPLIEMTFNILIDS 460

Query: 518 FLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAK 557
             QN + +  +E+  +M  P+    PD  T+S +++ L++
Sbjct: 461 LCQNGRVNNAIEVFEQM--PKYGCTPDIVTYSSLINGLSE 498


>gi|147819144|emb|CAN78081.1| hypothetical protein VITISV_021300 [Vitis vinifera]
          Length = 778

 Score =  225 bits (574), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 151/512 (29%), Positives = 256/512 (50%), Gaps = 18/512 (3%)

Query: 73  PPISSFNL-LFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVEN 131
           P +++FN+ ++G   +N+  DAV  F   +      PD +T N +++        LC + 
Sbjct: 206 PNVNTFNIVIYGYCLENKFKDAV-EFLNVMGKYNCSPDNVTYNTILD-------ALCKKG 257

Query: 132 RIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKT 191
           R+ +A  L  +M + G+ P+  TY  L+ G+C+ G L  A  + + M     +N L+   
Sbjct: 258 RLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMT----QNNLLP-- 311

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
           ++++Y+++I+ LC EG +++A +L  EM+   + P VV   TLI+G        E   L 
Sbjct: 312 DVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLL 371

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
            EM + G +PN +T N+M+   CK GK+++A+  +  M + G +PD  TYN+L++GYC  
Sbjct: 372 EEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKA 431

Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
           G +  A      M  K  K   V+ N ++   C+   +EEA  L       G     ++Y
Sbjct: 432 GNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSY 491

Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
            TL+ G F+ G    A KL+DEMK   + P   TYN +I GLC+    ++A+   + L  
Sbjct: 492 GTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLE 551

Query: 432 NKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEK 491
           +        +N ++ G C+ G ++ A++  +K+ +    P V T +I++ GLC +G LEK
Sbjct: 552 SGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGMLEK 611

Query: 492 ANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIV 551
           A          G A + VT+NTL+    +  +      LL +M E E  L PD  T++ +
Sbjct: 612 ALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKE--LGPDHYTYNAI 669

Query: 552 VDLLAKDEKYHECSA-VSKSSYRACLYVTIFQ 582
           +  L    +  E    +SK   +  L   + Q
Sbjct: 670 ITALTDSGRIREAEEFMSKMLEKGXLPXQVLQ 701



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 150/468 (32%), Positives = 232/468 (49%), Gaps = 15/468 (3%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
           N  L   CK G   L +AR     M      P  +++N+L     K        +    +
Sbjct: 247 NTILDALCKKG--RLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELM 304

Query: 102 VSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLING 161
               LLPD  T N+LIN       GLC E RI+EA  L   M    + PDV++Y TLING
Sbjct: 305 TQNNLLPDVWTYNMLIN-------GLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLING 357

Query: 162 FCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKG 221
                 +S A +L ++M     E G+  K N  +++I++   CKEG +D A     +M+ 
Sbjct: 358 CLEWSKISEAFKLLEEMS----EKGV--KPNAVTHNIMVKWYCKEGKMDDASNTITKMEE 411

Query: 222 RGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINE 281
            G +P  V   TLI+G+C AGN  E      EM     + + +T N ++  LC+  K+ E
Sbjct: 412 SGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEE 471

Query: 282 ANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILIN 341
           A  LL    +RG   D  +Y +L+ GY   G +D A +++  M  K    + V+YN +I 
Sbjct: 472 AYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIG 531

Query: 342 GYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEP 401
           G C+    E+A+S   +++ +G+     TYNT+L G  + G    A +  ++M   + +P
Sbjct: 532 GLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKP 591

Query: 402 DLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELF 461
           D+ T NIL+ GLC    +++A+KLF+             +N LI  LCK GRLD+A+ L 
Sbjct: 592 DVFTCNILLRGLCMEGMLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLL 651

Query: 462 HKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVV 509
            ++ +K L P   TY+ +I  L   G++ +A +F+  M + G  P  V
Sbjct: 652 SEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGXLPXQV 699



 Score =  219 bits (557), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 143/481 (29%), Positives = 246/481 (51%), Gaps = 12/481 (2%)

Query: 72  SPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVEN 131
           SP  +  +   GA  ++         ++K+  + L P+ LT N L+N          V  
Sbjct: 132 SPSKALLDTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSVSF 191

Query: 132 RIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKT 191
             +EA   F + I  G+ P+V T+  +I G+C       A+     M  G Y     S  
Sbjct: 192 S-REA---FNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVM--GKYN---CSPD 242

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
           N+ +Y+ I+D+LCK+G +  A++L ++MK RG+ P       L++G+C  G  +E   + 
Sbjct: 243 NV-TYNTILDALCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVI 301

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
             M      P++ T+N++I+ LC  G+I EA  L + M    L PD  +YN+L++G    
Sbjct: 302 ELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEW 361

Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
            +I  A ++   M  KG K   V++NI++  YCK   +++A +   ++  +G     +TY
Sbjct: 362 SKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTY 421

Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
           NTL++G  +AG  G A +  DEM   N++ D  T N ++  LC+   ++EA KL      
Sbjct: 422 NTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARK 481

Query: 432 NKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEK 491
             +      +  LI G  K G +D A +L+ ++ +K ++P+ VTY+ +I GLC+ GK E+
Sbjct: 482 RGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQ 541

Query: 492 ANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIV 551
           A   L  + ++G  P+  T+NT++HG+ +     K  +  +KM   E +  PD  T +I+
Sbjct: 542 AISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMV--ENSFKPDVFTCNIL 599

Query: 552 V 552
           +
Sbjct: 600 L 600



 Score =  218 bits (556), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 148/506 (29%), Positives = 247/506 (48%), Gaps = 20/506 (3%)

Query: 57  NEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL----VSIGLLPDFLT 112
           + A   F  M  ++  P + + N L  ++ +     +V SF R+     + +G++P+  T
Sbjct: 152 HHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSV-SFSREAFNDAIKLGIVPNVNT 210

Query: 113 LNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVAL 172
            NI+I        G C+EN+ K+A      M  +   PD +TY T+++  C+ G L  A 
Sbjct: 211 FNIVI-------YGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDALCKKGRLGDAR 263

Query: 173 RLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCT 232
            L   M S     GL+   N  +Y+I++   CK G + +A  +   M    + P V    
Sbjct: 264 DLLMDMKS----RGLLPNRN--TYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYN 317

Query: 233 TLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQR 292
            LI+G C  G  EE   L  EM +L   P+++++N +I+   +  KI+EA  LLE M ++
Sbjct: 318 MLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEK 377

Query: 293 GLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEA 352
           G+ P+  T+N ++  YC  G++D A      M   G     V+YN LINGYCK  N+ EA
Sbjct: 378 GVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEA 437

Query: 353 MSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDG 412
                ++    ++   +T NT+L  L +  +   A KL    +      D  +Y  LI G
Sbjct: 438 FRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVG 497

Query: 413 LCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPT 472
             K+  V  A+KL+  ++  +       +NC+I GLC+ G+ + A    ++L + GL+P 
Sbjct: 498 YFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPD 557

Query: 473 VVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLH 532
             TY+ ++HG CR+G +EKA  F   M +N   P+V T N L+ G        K ++L +
Sbjct: 558 ETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGMLEKALKLFN 617

Query: 533 KMAEPERNLVPDDTTFSIVVDLLAKD 558
                 + +  D  T++ ++  L K+
Sbjct: 618 TWVSKGKAI--DTVTYNTLITSLCKE 641



 Score =  115 bits (288), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 81/283 (28%), Positives = 140/283 (49%), Gaps = 5/283 (1%)

Query: 286 LELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILING--- 342
           L L I R  +P +   ++ +  Y   G+   A +IF  M     +  +++ N L+N    
Sbjct: 123 LHLSILRLTSPSKALLDTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVR 182

Query: 343 YCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPD 402
           Y    +V  +   +   I  G+   V T+N ++ G     +   A +  + M  YN  PD
Sbjct: 183 YPSSHSVSFSREAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPD 242

Query: 403 LSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFH 462
             TYN ++D LCK   + +A  L   ++          +N L+ G CK G L  A  +  
Sbjct: 243 NVTYNTILDALCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIE 302

Query: 463 KLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNN 522
            + Q  L+P V TY+++I+GLC +G++E+A      ME     P+VV++NTL++G L+ +
Sbjct: 303 LMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWS 362

Query: 523 KTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECS 565
           K S+  +LL +M+  E+ + P+  T +I+V    K+ K  + S
Sbjct: 363 KISEAFKLLEEMS--EKGVKPNAVTHNIMVKWYCKEGKMDDAS 403


>gi|224113307|ref|XP_002316451.1| predicted protein [Populus trichocarpa]
 gi|222865491|gb|EEF02622.1| predicted protein [Populus trichocarpa]
          Length = 707

 Score =  225 bits (574), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 158/534 (29%), Positives = 262/534 (49%), Gaps = 60/534 (11%)

Query: 41  LNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLF-GAVAKNRHYDAVISFYR 99
            N  L   CK+  I   EAR     +      P   +++++F G +  +    A +  YR
Sbjct: 174 FNSLLSGLCKARRIE--EARCMLNEIKCNGFVPDGFTYSIIFDGLLKSDDGAGAALDLYR 231

Query: 100 KLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLI 159
           + +  G+  D  T +IL+N       GLC E ++++A  + K+++  G+ P  + Y T++
Sbjct: 232 EAIGKGVKIDNYTCSILLN-------GLCKEGKVEKAEEVLKSLVEHGLVPGEVIYNTIV 284

Query: 160 NGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEM 219
           NG+C+ G++  A+   ++M S     GL  + N  +++ +ID  C+  ++DKA+E   +M
Sbjct: 285 NGYCQIGDMDRAILTIEQMES----RGL--RPNCIAFNSVIDKFCEMQMIDKAEEWVKKM 338

Query: 220 KGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKI 279
            G+GI P+V     LI G+     +     +  EM + G +PN++++  +I+CLCK GKI
Sbjct: 339 VGKGIAPSVETYNILIDGYGRLCVFSRCFQILEEMEENGEKPNVISYGSLINCLCKDGKI 398

Query: 280 NEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNIL 339
            EA  +L  M+ RG+ P+   YN L+DG C VG++  A   F  M   G   T+V+YN L
Sbjct: 399 LEAEMVLRDMVGRGVLPNANIYNMLIDGSCTVGKLREALRFFDEMSKNGIGATIVTYNSL 458

Query: 340 INGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNV 399
           I G CK+  ++EA  ++  I S G    VITYN+L+SG   AG +    +L++ MK   +
Sbjct: 459 IKGLCKMGKLKEAEEMFFLITSTGHCPDVITYNSLISGYSNAGNSQKCLELYETMKKLGL 518

Query: 400 EPDLSTYNILIDGLCKNNCVQEAVKLFH-----MLEMN---------------------- 432
           +P ++T++ LI G     C +E +KL       ML+MN                      
Sbjct: 519 KPTINTFHPLISG-----CSKEGIKLKETLFNEMLQMNLSPDRVVYNAMIHCYQETGHVQ 573

Query: 433 --------KFEFGI----EIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMI 480
                     + G+    + +N LI G  K G+L    +L   +  KGL+P   TYS++I
Sbjct: 574 KAFSLQKEMVDMGVRPDNKTYNSLILGHLKEGKLSETKDLVDDMKAKGLIPEADTYSLLI 633

Query: 481 HGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKM 534
            G C       A  +   M +NG  PNV   N L  G  ++ +  +   +  +M
Sbjct: 634 QGHCDLKDFNGAYVWYREMLENGFLPNVCICNELSTGLRKDGRLQEAQSICSEM 687



 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 141/498 (28%), Positives = 238/498 (47%), Gaps = 17/498 (3%)

Query: 56  LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNI 115
           + +A   FG M+     P   +FN L     K    D  I    ++    + P  +T N 
Sbjct: 117 IRDAEKLFGEMSVRNLVPNRVTFNTLIDGYCKAGEVDVAIGLRERMKKEKVEPSIITFNS 176

Query: 116 LINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGN-LSVALRL 174
           L++       GLC   RI+EA  +   +   G  PD  TY  + +G  ++ +    AL L
Sbjct: 177 LLS-------GLCKARRIEEARCMLNEIKCNGFVPDGFTYSIIFDGLLKSDDGAGAALDL 229

Query: 175 HKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTL 234
           +++ +      G   K + ++ SI+++ LCKEG V+KA+E+   +   G+ P  V+  T+
Sbjct: 230 YREAI------GKGVKIDNYTCSILLNGLCKEGKVEKAEEVLKSLVEHGLVPGEVIYNTI 283

Query: 235 IHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGL 294
           ++G+C  G+ +       +M   G RPN + FN +ID  C+   I++A   ++ M+ +G+
Sbjct: 284 VNGYCQIGDMDRAILTIEQMESRGLRPNCIAFNSVIDKFCEMQMIDKAEEWVKKMVGKGI 343

Query: 295 NPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMS 354
            P   TYN L+DGY  +       +I   M   G K  V+SY  LIN  CK   + EA  
Sbjct: 344 APSVETYNILIDGYGRLCVFSRCFQILEEMEENGEKPNVISYGSLINCLCKDGKILEAEM 403

Query: 355 LYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLC 414
           + R ++  GV      YN L+ G    G+   A + FDEM    +   + TYN LI GLC
Sbjct: 404 VLRDMVGRGVLPNANIYNMLIDGSCTVGKLREALRFFDEMSKNGIGATIVTYNSLIKGLC 463

Query: 415 KNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVV 474
           K   ++EA ++F ++        +  +N LI G   AG      EL+  + + GL PT+ 
Sbjct: 464 KMGKLKEAEEMFFLITSTGHCPDVITYNSLISGYSNAGNSQKCLELYETMKKLGLKPTIN 523

Query: 475 TYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKM 534
           T+  +I G  ++G   K   F   ++ N  +P+ V +N ++H + +     K   L  +M
Sbjct: 524 TFHPLISGCSKEGIKLKETLFNEMLQMN-LSPDRVVYNAMIHCYQETGHVQKAFSLQKEM 582

Query: 535 AEPERNLVPDDTTFSIVV 552
              +  + PD+ T++ ++
Sbjct: 583 V--DMGVRPDNKTYNSLI 598



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 145/550 (26%), Positives = 240/550 (43%), Gaps = 86/550 (15%)

Query: 80  LLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWL 139
           +L    ++++ +  V   Y  +   G LP F  + +++         L    +      L
Sbjct: 1   MLLSVCSESKMHSQVSELYDFMRQEGRLPSFGYVRMIV-------ESLVESKKFDNVLDL 53

Query: 140 FKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSII 199
           FK M+  G RPD + YG  +    + G+L +A+ L + M             N+F Y+++
Sbjct: 54  FKEMVGLGFRPDKLVYGRAMLAAVKLGDLKLAMELFETMKRRKV------VPNVFVYNVL 107

Query: 200 IDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGP 259
           I  LCKE  +  A++LF EM  R + P  V   TLI G+C AG  +   GL   M     
Sbjct: 108 IGGLCKEKRIRDAEKLFGEMSVRNLVPNRVTFNTLIDGYCKAGEVDVAIGLRERMKKEKV 167

Query: 260 RPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMD------------- 306
            P+++TFN ++  LCK  +I EA  +L  +   G  PD FTY+ + D             
Sbjct: 168 EPSIITFNSLLSGLCKARRIEEARCMLNEIKCNGFVPDGFTYSIIFDGLLKSDDGAGAAL 227

Query: 307 -----------------------GYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGY 343
                                  G C  G+++ A E+  S+   G     V YN ++NGY
Sbjct: 228 DLYREAIGKGVKIDNYTCSILLNGLCKEGKVEKAEEVLKSLVEHGLVPGEVIYNTIVNGY 287

Query: 344 CKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDL 403
           C+I +++ A+    Q+ S G+R   I +N+++    +      A++   +M    + P +
Sbjct: 288 CQIGDMDRAILTIEQMESRGLRPNCIAFNSVIDKFCEMQMIDKAEEWVKKMVGKGIAPSV 347

Query: 404 STYNILIDG-----------------------------------LCKNNCVQEAVKLFHM 428
            TYNILIDG                                   LCK+  + EA  +   
Sbjct: 348 ETYNILIDGYGRLCVFSRCFQILEEMEENGEKPNVISYGSLINCLCKDGKILEAEMVLRD 407

Query: 429 LEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGK 488
           +          I+N LIDG C  G+L  A   F ++ + G+  T+VTY+ +I GLC+ GK
Sbjct: 408 MVGRGVLPNANIYNMLIDGSCTVGKLREALRFFDEMSKNGIGATIVTYNSLIKGLCKMGK 467

Query: 489 LEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTF 548
           L++A +    +   G  P+V+T+N+L+ G+     + K +EL   M   +  L P   TF
Sbjct: 468 LKEAEEMFFLITSTGHCPDVITYNSLISGYSNAGNSQKCLELYETM--KKLGLKPTINTF 525

Query: 549 SIVVDLLAKD 558
             ++   +K+
Sbjct: 526 HPLISGCSKE 535



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 129/455 (28%), Positives = 200/455 (43%), Gaps = 49/455 (10%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CK G   + +A      +      P    +N +     +    D  I    ++ S GL P
Sbjct: 253 CKEG--KVEKAEEVLKSLVEHGLVPGEVIYNTIVNGYCQIGDMDRAILTIEQMESRGLRP 310

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           + +  N +I+ F       C    I +A    K M+  G+ P V TY  LI+G+ R    
Sbjct: 311 NCIAFNSVIDKF-------CEMQMIDKAEEWVKKMVGKGIAPSVETYNILIDGYGRLCVF 363

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
           S   ++ ++M     ENG   K N+ SY  +I+ LCK+G + +A+ +  +M GRG+ P  
Sbjct: 364 SRCFQILEEM----EENG--EKPNVISYGSLINCLCKDGKILEAEMVLRDMVGRGVLPNA 417

Query: 229 VVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLEL 288
            +   LI G C  G   E    F EM   G    ++T+N +I  LCK GK+ EA  +  L
Sbjct: 418 NIYNMLIDGSCTVGKLREALRFFDEMSKNGIGATIVTYNSLIKGLCKMGKLKEAEEMFFL 477

Query: 289 MIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTV--------------- 333
           +   G  PD  TYNSL+ GY   G      E++ +M   G K T+               
Sbjct: 478 ITSTGHCPDVITYNSLISGYSNAGNSQKCLELYETMKKLGLKPTINTFHPLISGCSKEGI 537

Query: 334 -------------------VSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTL 374
                              V YN +I+ Y +  +V++A SL ++++  GVR    TYN+L
Sbjct: 538 KLKETLFNEMLQMNLSPDRVVYNAMIHCYQETGHVQKAFSLQKEMVDMGVRPDNKTYNSL 597

Query: 375 LSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKF 434
           + G  + G+    + L D+MK   + P+  TY++LI G C       A   +  +  N F
Sbjct: 598 ILGHLKEGKLSETKDLVDDMKAKGLIPEADTYSLLIQGHCDLKDFNGAYVWYREMLENGF 657

Query: 435 EFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGL 469
              + I N L  GL K GRL  A  +  ++   G+
Sbjct: 658 LPNVCICNELSTGLRKDGRLQEAQSICSEMIANGM 692



 Score =  108 bits (270), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 63/221 (28%), Positives = 120/221 (54%), Gaps = 1/221 (0%)

Query: 350 EEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNIL 409
           +  + L+++++  G R   + Y   +    + G    A +LF+ MK   V P++  YN+L
Sbjct: 48  DNVLDLFKEMVGLGFRPDKLVYGRAMLAAVKLGDLKLAMELFETMKRRKVVPNVFVYNVL 107

Query: 410 IDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGL 469
           I GLCK   +++A KLF  + +         FN LIDG CKAG +D A  L  ++ ++ +
Sbjct: 108 IGGLCKEKRIRDAEKLFGEMSVRNLVPNRVTFNTLIDGYCKAGEVDVAIGLRERMKKEKV 167

Query: 470 VPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVE 529
            P+++T++ ++ GLC+  ++E+A   L  ++ NG  P+  T++ +  G L+++  +    
Sbjct: 168 EPSIITFNSLLSGLCKARRIEEARCMLNEIKCNGFVPDGFTYSIIFDGLLKSDDGAGAAL 227

Query: 530 LLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKS 570
            L++ A   + +  D+ T SI+++ L K+ K  +   V KS
Sbjct: 228 DLYREA-IGKGVKIDNYTCSILLNGLCKEGKVEKAEEVLKS 267


>gi|356524104|ref|XP_003530672.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Glycine max]
          Length = 742

 Score =  225 bits (574), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 131/455 (28%), Positives = 233/455 (51%), Gaps = 14/455 (3%)

Query: 98  YRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGT 157
           + KL++ G+L    + N+ +    N   G      I+ A  +F+     GV  + ++Y  
Sbjct: 204 FDKLLNYGVLVSVDSCNLFLARLSNSFDG------IRTAFRVFREYSEVGVCWNTVSYNI 257

Query: 158 LINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFL 217
           +++  C+ G +  A   H  ++  ++   +    ++ SYS+I+D  C+   + K  +L  
Sbjct: 258 ILHLLCQLGKVKEA---HSLLIQMEFRGNV---PDVVSYSVIVDGYCQVEQLGKVLKLME 311

Query: 218 EMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGG 277
           E++ +G+ P      ++I   C  G   E   +   M +    P+ + +  +I    K G
Sbjct: 312 ELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTTLISGFGKSG 371

Query: 278 KINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYN 337
            ++    L + M ++ + PD  TY S++ G C  G++  AR++F  M SKG K   V+Y 
Sbjct: 372 NVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKGLKPDEVTYT 431

Query: 338 ILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLY 397
            LI+GYCK   ++EA SL+ Q++  G+   V+TY  L+ GL + G+   A +L  EM   
Sbjct: 432 ALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSEK 491

Query: 398 NVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNA 457
            ++P++ TYN LI+GLCK   +++AVKL   +++  F      +  ++D  CK G +  A
Sbjct: 492 GLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKA 551

Query: 458 WELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHG 517
            EL   +  KGL PT+VT++++++G C  G LE     + +M   G  PN  TFN+LM  
Sbjct: 552 HELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFNSLMKQ 611

Query: 518 FLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVV 552
           +   N     +E+   M    + +VPD  T++I++
Sbjct: 612 YCIRNNMRATIEIYKGMH--AQGVVPDTNTYNILI 644



 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 141/514 (27%), Positives = 246/514 (47%), Gaps = 50/514 (9%)

Query: 98  YRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGT 157
           +R+   +G+  + ++ NI+++        LC   ++KEA  L   M   G  PDV++Y  
Sbjct: 240 FREYSEVGVCWNTVSYNIILHL-------LCQLGKVKEAHSLLIQMEFRGNVPDVVSYSV 292

Query: 158 LINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKE--- 214
           +++G+C+   L   L+L +++       GL  K N ++Y+ II  LCK G V +A++   
Sbjct: 293 IVDGYCQVEQLGKVLKLMEEL----QRKGL--KPNQYTYNSIISFLCKTGRVVEAEQVLR 346

Query: 215 --------------------------------LFLEMKGRGINPAVVVCTTLIHGFCCAG 242
                                           LF EMK + I P  V  T++IHG C AG
Sbjct: 347 VMKNQRIFPDNVVYTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAG 406

Query: 243 NWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYN 302
              E   LF EML  G +P+ +T+  +ID  CK G++ EA  L   M+++GL P+  TY 
Sbjct: 407 KVVEARKLFSEMLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYT 466

Query: 303 SLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISN 362
           +L+DG C  G +D A E+   M  KG +  V +YN LING CK+ N+E+A+ L  ++   
Sbjct: 467 ALVDGLCKCGEVDIANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLA 526

Query: 363 GVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEA 422
           G     ITY T++    + G+   A +L   M    ++P + T+N+L++G C +  +++ 
Sbjct: 527 GFFPDTITYTTIMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDG 586

Query: 423 VKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHG 482
            +L   +           FN L+   C    +    E++  +  +G+VP   TY+I+I G
Sbjct: 587 ERLIKWMLDKGIMPNATTFNSLMKQYCIRNNMRATIEIYKGMHAQGVVPDTNTYNILIKG 646

Query: 483 LCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLV 542
            C+   +++A      M + G +    ++N+L+ GF +  K  +  +L  +M       +
Sbjct: 647 HCKARNMKEAWFLHKEMVEKGFSLTAASYNSLIKGFYKRKKFEEARKLFEEMR--THGFI 704

Query: 543 PDDTTFSIVVDLLAKDEKYHECSAVSKSSYRACL 576
            +   + I VD+  ++  +     +   +   CL
Sbjct: 705 AEKEIYDIFVDVNYEEGNWENTLELCDEAIEKCL 738



 Score =  221 bits (564), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 134/462 (29%), Positives = 234/462 (50%), Gaps = 15/462 (3%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
           N  LH  C+ G   + EA      M      P + S++++     +      V+    +L
Sbjct: 256 NIILHLLCQLG--KVKEAHSLLIQMEFRGNVPDVVSYSVIVDGYCQVEQLGKVLKLMEEL 313

Query: 102 VSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLING 161
              GL P+  T N +I+        LC   R+ EA  + + M    + PD + Y TLI+G
Sbjct: 314 QRKGLKPNQYTYNSIISF-------LCKTGRVVEAEQVLRVMKNQRIFPDNVVYTTLISG 366

Query: 162 FCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKG 221
           F ++GN+SV  +L  +M         ++      Y+ +I  LC+ G V +A++LF EM  
Sbjct: 367 FGKSGNVSVEYKLFDEMKRKKIVPDFVT------YTSMIHGLCQAGKVVEARKLFSEMLS 420

Query: 222 RGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINE 281
           +G+ P  V  T LI G+C AG  +E   L  +M++ G  PN++T+  ++D LCK G+++ 
Sbjct: 421 KGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDI 480

Query: 282 ANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILIN 341
           AN LL  M ++GL P+  TYN+L++G C VG I+ A ++   M   G     ++Y  +++
Sbjct: 481 ANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMD 540

Query: 342 GYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEP 401
            YCK+  + +A  L R ++  G++ T++T+N L++G   +G     ++L   M    + P
Sbjct: 541 AYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMP 600

Query: 402 DLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELF 461
           + +T+N L+   C  N ++  ++++  +           +N LI G CKA  +  AW L 
Sbjct: 601 NATTFNSLMKQYCIRNNMRATIEIYKGMHAQGVVPDTNTYNILIKGHCKARNMKEAWFLH 660

Query: 462 HKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNG 503
            ++ +KG   T  +Y+ +I G  ++ K E+A      M  +G
Sbjct: 661 KEMVEKGFSLTAASYNSLIKGFYKRKKFEEARKLFEEMRTHG 702



 Score =  208 bits (529), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 131/422 (31%), Positives = 209/422 (49%), Gaps = 15/422 (3%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CK+G   + EA      M + +  P    +  L     K+ +       + ++    ++P
Sbjct: 333 CKTG--RVVEAEQVLRVMKNQRIFPDNVVYTTLISGFGKSGNVSVEYKLFDEMKRKKIVP 390

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           DF+T   +I+       GLC   ++ EA  LF  M++ G++PD +TY  LI+G+C+ G +
Sbjct: 391 DFVTYTSMIH-------GLCQAGKVVEARKLFSEMLSKGLKPDEVTYTALIDGYCKAGEM 443

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
             A  LH +MV    E GL    N+ +Y+ ++D LCK G VD A EL  EM  +G+ P V
Sbjct: 444 KEAFSLHNQMV----EKGLTP--NVVTYTALVDGLCKCGEVDIANELLHEMSEKGLQPNV 497

Query: 229 VVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLEL 288
                LI+G C  GN E+   L  EM   G  P+ +T+  ++D  CK G++ +A+ LL +
Sbjct: 498 CTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKAHELLRI 557

Query: 289 MIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILN 348
           M+ +GL P   T+N LM+G+C+ G ++    +   M  KG      ++N L+  YC   N
Sbjct: 558 MLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFNSLMKQYCIRNN 617

Query: 349 VEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNI 408
           +   + +Y+ + + GV     TYN L+ G  +A     A  L  EM         ++YN 
Sbjct: 618 MRATIEIYKGMHAQGVVPDTNTYNILIKGHCKARNMKEAWFLHKEMVEKGFSLTAASYNS 677

Query: 409 LIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKG 468
           LI G  K    +EA KLF  +  + F    EI++  +D   + G  +N  EL  +  +K 
Sbjct: 678 LIKGFYKRKKFEEARKLFEEMRTHGFIAEKEIYDIFVDVNYEEGNWENTLELCDEAIEKC 737

Query: 469 LV 470
           LV
Sbjct: 738 LV 739



 Score = 66.6 bits (161), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 55/232 (23%), Positives = 99/232 (42%), Gaps = 38/232 (16%)

Query: 369 ITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLS------------------------ 404
           + ++     L +AG    A KLFD++  Y V   +                         
Sbjct: 182 LVFDVFFQVLVEAGLLLEAGKLFDKLLNYGVLVSVDSCNLFLARLSNSFDGIRTAFRVFR 241

Query: 405 ------------TYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAG 452
                       +YNI++  LC+   V+EA  L   +E       +  ++ ++DG C+  
Sbjct: 242 EYSEVGVCWNTVSYNIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSVIVDGYCQVE 301

Query: 453 RLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFN 512
           +L    +L  +L +KGL P   TY+ +I  LC+ G++ +A   L  M+     P+ V + 
Sbjct: 302 QLGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYT 361

Query: 513 TLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHEC 564
           TL+ GF ++   S   +L  +M    + +VPD  T++ ++  L +  K  E 
Sbjct: 362 TLISGFGKSGNVSVEYKLFDEMK--RKKIVPDFVTYTSMIHGLCQAGKVVEA 411


>gi|147833070|emb|CAN77584.1| hypothetical protein VITISV_034996 [Vitis vinifera]
          Length = 913

 Score =  225 bits (574), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 160/602 (26%), Positives = 283/602 (47%), Gaps = 90/602 (14%)

Query: 32  AAVSSPETQLNEF--LHE--NCKSGIINLN-------------EARYFFGYMTHMQPSPP 74
           A  S P+  L+ F  +HE   C+ GI + N             EA  FF Y   M  SP 
Sbjct: 64  AKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFETMGLSPN 123

Query: 75  ISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIK 134
           + ++N+L     + + +D        +   G  PD  +   LIN        L     + 
Sbjct: 124 LQTYNILIKISCRKKQFDKAKELLNWMWGQGFSPDVFSYGTLIN-------SLAKNGYMS 176

Query: 135 EATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSG--------DYE-- 184
           +A  LF  M   GV PDV  Y  LI+GF + G++  A  + ++++ G         Y   
Sbjct: 177 DALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVM 236

Query: 185 -NGLIS-------------------KTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGI 224
            NGL                       ++++YS +I  LC  G +D A  ++ EM   G+
Sbjct: 237 INGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGV 296

Query: 225 NPAVVVCTTLIHGFCCAGNWEE----------------------VNGLF--------IEM 254
           +P VVV  T+++G+  AG  EE                      + GLF        I +
Sbjct: 297 SPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCRTVVSYNILIRGLFENAKVDEAISI 356

Query: 255 LDLGPRPNL----LTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCL 310
            +L P  +     +T+ V++  LCK G +N+A  +LE       + D F Y+S+++G C 
Sbjct: 357 WELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCR 416

Query: 311 VGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVIT 370
            GR+D    +   M   GCK      N +ING+ +   +E+A+  +  ++S G   TV+T
Sbjct: 417 EGRLDEVAGVLDQMTKHGCKPNPYVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVT 476

Query: 371 YNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLE 430
           YNTL++GL +A +   A  L  EM     +P++ TY++L++GLC+   +  A+ L+    
Sbjct: 477 YNTLINGLSKAERFSEAYALVKEMLQKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQAL 536

Query: 431 MNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLE 490
              F+  +++ N +I GLC +G++++A +L+ ++ Q+  VP +VT++ ++ G  +    E
Sbjct: 537 EKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRNCVPNLVTHNTLMEGFYKVRDFE 596

Query: 491 KANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSI 550
           +A+    ++ + G  P+++++N  + G    ++ S  V  L+     +R ++P   T++I
Sbjct: 597 RASKIWDHILQYGLQPDIISYNITLKGLCSCHRISDAVGFLNDAV--DRGVLPTAITWNI 654

Query: 551 VV 552
           +V
Sbjct: 655 LV 656



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 124/447 (27%), Positives = 223/447 (49%), Gaps = 14/447 (3%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
           P I S+N++   + K   +D     + ++       D  T + LI+       GLC    
Sbjct: 228 PNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIH-------GLCGSGN 280

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
           +  AT ++K M   GV PDV+ Y T++NG+ R G +   L L K M              
Sbjct: 281 LDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCRT------- 333

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
           + SY+I+I  L +   VD+A  ++  +  +      +    L+HG C  G   +   +  
Sbjct: 334 VVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILE 393

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
           E  +     +   ++ MI+ LC+ G+++E  G+L+ M + G  P+ +  N++++G+    
Sbjct: 394 EAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPYVCNAVINGFVRAS 453

Query: 313 RIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYN 372
           +++ A   F +M SKGC  TVV+YN LING  K     EA +L ++++  G +  +ITY+
Sbjct: 454 KLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLQKGWKPNMITYS 513

Query: 373 TLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMN 432
            L++GL Q  +   A  L+ +      +PD+  +NI+I GLC +  V++A++L+  ++  
Sbjct: 514 LLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQR 573

Query: 433 KFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKA 492
                +   N L++G  K    + A +++  + Q GL P +++Y+I + GLC   ++  A
Sbjct: 574 NCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQYGLQPDIISYNITLKGLCSCHRISDA 633

Query: 493 NDFLLYMEKNGCAPNVVTFNTLMHGFL 519
             FL      G  P  +T+N L+ G+L
Sbjct: 634 VGFLNDAVDRGVLPTAITWNILVQGYL 660



 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 128/451 (28%), Positives = 216/451 (47%), Gaps = 45/451 (9%)

Query: 146 FGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCK 205
           FG +P + +Y +L+N    +     A           Y   +    N+ +Y+I+I   C+
Sbjct: 83  FGCQPGIRSYNSLLNALIESNKWDEAESFFL------YFETMGLSPNLQTYNILIKISCR 136

Query: 206 EGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEM----------- 254
           +   DKAKEL   M G+G +P V    TLI+     G   +   LF EM           
Sbjct: 137 KKQFDKAKELLNWMWGQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVAC 196

Query: 255 -----------------------LDLGPR--PNLLTFNVMIDCLCKGGKINEANGLLELM 289
                                  L  GP   PN+ ++NVMI+ LCK GK +E+  +   M
Sbjct: 197 YNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRM 256

Query: 290 IQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNV 349
            +     D +TY++L+ G C  G +D A  ++  M   G    VV YN ++NGY +   +
Sbjct: 257 KKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRI 316

Query: 350 EEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNIL 409
           EE + L++ +   G R TV++YN L+ GLF+  +   A  +++ +   +   D  TY +L
Sbjct: 317 EECLELWKVMEKEGCR-TVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVL 375

Query: 410 IDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGL 469
           + GLCKN  + +A+ +    E  + +     ++ +I+GLC+ GRLD    +  ++ + G 
Sbjct: 376 VHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGC 435

Query: 470 VPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVE 529
            P     + +I+G  R  KLE A  F   M   GC P VVT+NTL++G  +  + S+   
Sbjct: 436 KPNPYVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYA 495

Query: 530 LLHKMAEPERNLVPDDTTFSIVVDLLAKDEK 560
           L+ +M   ++   P+  T+S++++ L + +K
Sbjct: 496 LVKEML--QKGWKPNMITYSLLMNGLCQGKK 524



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 95/377 (25%), Positives = 194/377 (51%), Gaps = 5/377 (1%)

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKG-RGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
           +F   ++  +  K  + D+A ++F  M    G  P +    +L++    +  W+E    F
Sbjct: 53  LFDPKLVAHAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFF 112

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
           +    +G  PNL T+N++I   C+  + ++A  LL  M  +G +PD F+Y +L++     
Sbjct: 113 LYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWGQGFSPDVFSYGTLINSLAKN 172

Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISN-GVRQTVIT 370
           G +  A ++F  M  +G    V  YNILI+G+ K  ++  A  ++ +++    V   + +
Sbjct: 173 GYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPS 232

Query: 371 YNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLE 430
           YN +++GL + G+   + +++  MK      DL TY+ LI GLC +  +  A +++  + 
Sbjct: 233 YNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMA 292

Query: 431 MNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLE 490
            N     + ++N +++G  +AGR++   EL+  + ++G   TVV+Y+I+I GL    K++
Sbjct: 293 ENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEG-CRTVVSYNILIRGLFENAKVD 351

Query: 491 KANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSI 550
           +A      + +  C  + +T+  L+HG  +N   +K + +L +      +L  D   +S 
Sbjct: 352 EAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDL--DTFAYSS 409

Query: 551 VVDLLAKDEKYHECSAV 567
           +++ L ++ +  E + V
Sbjct: 410 MINGLCREGRLDEVAGV 426



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 45/212 (21%), Positives = 88/212 (41%), Gaps = 36/212 (16%)

Query: 56  LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNI 115
           L +A  FFG M      P + ++N L   ++K   +    +  ++++  G  P+ +T ++
Sbjct: 455 LEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLQKGWKPNMITYSL 514

Query: 116 LINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLH 175
           L+N       GLC   ++  A  L+   +  G +PDV  +  +I+G C +G +  AL+L+
Sbjct: 515 LMN-------GLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLY 567

Query: 176 KKMVSGDYENGLIS-----------------------------KTNIFSYSIIIDSLCKE 206
            +M   +    L++                             + +I SY+I +  LC  
Sbjct: 568 SEMKQRNCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQYGLQPDIISYNITLKGLCSC 627

Query: 207 GLVDKAKELFLEMKGRGINPAVVVCTTLIHGF 238
             +  A     +   RG+ P  +    L+ G+
Sbjct: 628 HRISDAVGFLNDAVDRGVLPTAITWNILVQGY 659


>gi|449454139|ref|XP_004144813.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Cucumis sativus]
 gi|449524964|ref|XP_004169491.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Cucumis sativus]
          Length = 611

 Score =  225 bits (573), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 133/399 (33%), Positives = 210/399 (52%), Gaps = 11/399 (2%)

Query: 126 GLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKM-VSGDYE 184
            L  EN      +++K MI   + P++IT+ T+ING C+ G L+ A  +   M V G + 
Sbjct: 204 ALVKENEFGGVEFVYKEMIRRKISPNLITFNTVINGLCKVGKLNKAGDVVDDMKVWGFW- 262

Query: 185 NGLISKTNIFSYSIIIDSLCKEGLVDK---AKELFLEMKGRGINPAVVVCTTLIHGFCCA 241
                  N+ +Y+ +ID  CK G V K   A  +  EM    ++P  V    LI GFC  
Sbjct: 263 ------PNVVTYNTLIDGYCKMGRVGKMYKADAILKEMVENKVSPNSVTFNVLIDGFCKD 316

Query: 242 GNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTY 301
            N      +F EM   G +P ++T+N +++ LC  GK+NEA  LL+ M+   L P+  TY
Sbjct: 317 ENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVITY 376

Query: 302 NSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIIS 361
           N+L++GYC    ++ ARE+F ++  +G    V+++N L++GYCK   +EEA  L + ++ 
Sbjct: 377 NALINGYCKKKLLEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGKMEEAFLLQKVMLE 436

Query: 362 NGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQE 421
            G      TYN L+ G  + G+    + L +EM+   V+ D  TYNILI   C+    ++
Sbjct: 437 KGFLPNASTYNCLIVGFCREGKMEEVKNLLNEMQCRGVKADTVTYNILISAWCEKKEPKK 496

Query: 422 AVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIH 481
           A +L   +     +     +N L++G C  G L  A  L  ++ ++G    VVTY+++I 
Sbjct: 497 AARLIDEMLDKGLKPSHLTYNILLNGYCMEGNLRAALNLRKQMEKEGRWANVVTYNVLIQ 556

Query: 482 GLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQ 520
           G CRKGKLE AN  L  M + G  PN  T+  +    ++
Sbjct: 557 GYCRKGKLEDANGLLNEMLEKGLIPNRTTYEIIKEEMME 595



 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 132/416 (31%), Positives = 224/416 (53%), Gaps = 16/416 (3%)

Query: 77  SFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEA 136
           S N L  A+ K   +  V   Y++++   + P+ +T N +IN       GLC   ++ +A
Sbjct: 197 SCNPLLSALVKENEFGGVEFVYKEMIRRKISPNLITFNTVIN-------GLCKVGKLNKA 249

Query: 137 TWLFKNMIAFGVRPDVITYGTLINGFC---RTGNLSVALRLHKKMVSGDYENGLISKTNI 193
             +  +M  +G  P+V+TY TLI+G+C   R G +  A  + K+MV    EN +    N 
Sbjct: 250 GDVVDDMKVWGFWPNVVTYNTLIDGYCKMGRVGKMYKADAILKEMV----ENKV--SPNS 303

Query: 194 FSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIE 253
            +++++ID  CK+  +  A ++F EM+ +G+ P VV   +L++G C  G   E   L  E
Sbjct: 304 VTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDE 363

Query: 254 MLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGR 313
           ML    +PN++T+N +I+  CK   + EA  L + + ++GL P+  T+N+L+ GYC  G+
Sbjct: 364 MLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGK 423

Query: 314 IDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNT 373
           ++ A  +   M  KG      +YN LI G+C+   +EE  +L  ++   GV+   +TYN 
Sbjct: 424 MEEAFLLQKVMLEKGFLPNASTYNCLIVGFCREGKMEEVKNLLNEMQCRGVKADTVTYNI 483

Query: 374 LLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNK 433
           L+S   +  +   A +L DEM    ++P   TYNIL++G C    ++ A+ L   +E   
Sbjct: 484 LISAWCEKKEPKKAARLIDEMLDKGLKPSHLTYNILLNGYCMEGNLRAALNLRKQMEKEG 543

Query: 434 FEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKL 489
               +  +N LI G C+ G+L++A  L +++ +KGL+P   TY I+   +  KG L
Sbjct: 544 RWANVVTYNVLIQGYCRKGKLEDANGLLNEMLEKGLIPNRTTYEIIKEEMMEKGFL 599



 Score =  211 bits (538), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 168/566 (29%), Positives = 265/566 (46%), Gaps = 54/566 (9%)

Query: 10  LFSSETVSKVKLSSLFKSPRQIAAVSSPETQLNEFLHENCKSGIIN-LNEARYFFGYMTH 68
           L S +  S +K    FKSP              +FLH+   SG ++ L   RYF      
Sbjct: 54  LISRQQWSILKSHVKFKSPI-------------DFLHQLMGSGDVDPLLVLRYFNWSRRE 100

Query: 69  MQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLV------SIGLLPDFLTLNILINCFGN 122
           +  +  I     L   +A  +HY  + S     V      SI L+  F +L++   C G 
Sbjct: 101 LNVNYSIELICRLLNLLANAKHYPKIRSILDSFVKGETNCSISLI--FHSLSV---CSGQ 155

Query: 123 KERGLCVENRIKEATWL--------------FKNMIAFGVRPDVITYGTLINGFCRTGNL 168
                C  + I +   L              FK    +  +  V++   L++   +    
Sbjct: 156 ----FCANSIIADMLVLAYVENSKTVLGLEAFKRAGDYRYKLSVLSCNPLLSALVKENEF 211

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
                ++K+M+            N+ +++ +I+ LCK G ++KA ++  +MK  G  P V
Sbjct: 212 GGVEFVYKEMIRRKIS------PNLITFNTVINGLCKVGKLNKAGDVVDDMKVWGFWPNV 265

Query: 229 VVCTTLIHGFCC---AGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGL 285
           V   TLI G+C     G   + + +  EM++    PN +TFNV+ID  CK   ++ A  +
Sbjct: 266 VTYNTLIDGYCKMGRVGKMYKADAILKEMVENKVSPNSVTFNVLIDGFCKDENLSAALKV 325

Query: 286 LELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCK 345
            E M  +GL P   TYNSL++G C  G+++ A+ +   M S   K  V++YN LINGYCK
Sbjct: 326 FEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALINGYCK 385

Query: 346 ILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLST 405
              +EEA  L+  I   G+   VIT+NTLL G  + G+   A  L   M      P+ ST
Sbjct: 386 KKLLEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNAST 445

Query: 406 YNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLP 465
           YN LI G C+   ++E   L + ++    +     +N LI   C+      A  L  ++ 
Sbjct: 446 YNCLIVGFCREGKMEEVKNLLNEMQCRGVKADTVTYNILISAWCEKKEPKKAARLIDEML 505

Query: 466 QKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTS 525
            KGL P+ +TY+I+++G C +G L  A +    MEK G   NVVT+N L+ G+ +  K  
Sbjct: 506 DKGLKPSHLTYNILLNGYCMEGNLRAALNLRKQMEKEGRWANVVTYNVLIQGYCRKGKLE 565

Query: 526 KVVELLHKMAEPERNLVPDDTTFSIV 551
               LL++M   E+ L+P+ TT+ I+
Sbjct: 566 DANGLLNEML--EKGLIPNRTTYEII 589



 Score = 95.9 bits (237), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 74/259 (28%), Positives = 115/259 (44%), Gaps = 26/259 (10%)

Query: 41  LNEFLHENCKSGIINLN-------------EARYFFGYMTHMQPSPPISSFNLLFGAVAK 87
           L+E L  N K  +I  N             EAR  F  +     +P + +FN L     K
Sbjct: 361 LDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQGLTPNVITFNTLLHGYCK 420

Query: 88  NRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFG 147
               +      + ++  G LP+  T N LI        G C E +++E   L   M   G
Sbjct: 421 FGKMEEAFLLQKVMLEKGFLPNASTYNCLI-------VGFCREGKMEEVKNLLNEMQCRG 473

Query: 148 VRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEG 207
           V+ D +TY  LI+ +C       A RL  +M+    + GL  K +  +Y+I+++  C EG
Sbjct: 474 VKADTVTYNILISAWCEKKEPKKAARLIDEML----DKGL--KPSHLTYNILLNGYCMEG 527

Query: 208 LVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFN 267
            +  A  L  +M+  G    VV    LI G+C  G  E+ NGL  EML+ G  PN  T+ 
Sbjct: 528 NLRAALNLRKQMEKEGRWANVVTYNVLIQGYCRKGKLEDANGLLNEMLEKGLIPNRTTYE 587

Query: 268 VMIDCLCKGGKINEANGLL 286
           ++ + + + G + +  G L
Sbjct: 588 IIKEEMMEKGFLPDIEGHL 606



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 43/158 (27%), Positives = 83/158 (52%), Gaps = 7/158 (4%)

Query: 434 FEFGIEIFNC--LIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEK 491
           + + + + +C  L+  L K         ++ ++ ++ + P ++T++ +I+GLC+ GKL K
Sbjct: 189 YRYKLSVLSCNPLLSALVKENEFGGVEFVYKEMIRRKISPNLITFNTVINGLCKVGKLNK 248

Query: 492 ANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVE---LLHKMAEPERNLVPDDTTF 548
           A D +  M+  G  PNVVT+NTL+ G+ +  +  K+ +   +L +M E    + P+  TF
Sbjct: 249 AGDVVDDMKVWGFWPNVVTYNTLIDGYCKMGRVGKMYKADAILKEMVE--NKVSPNSVTF 306

Query: 549 SIVVDLLAKDEKYHECSAVSKSSYRACLYVTIFQPSSL 586
           ++++D   KDE       V +      L  T+   +SL
Sbjct: 307 NVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSL 344


>gi|115468576|ref|NP_001057887.1| Os06g0565000 [Oryza sativa Japonica Group]
 gi|113595927|dbj|BAF19801.1| Os06g0565000 [Oryza sativa Japonica Group]
 gi|125597608|gb|EAZ37388.1| hypothetical protein OsJ_21726 [Oryza sativa Japonica Group]
          Length = 687

 Score =  225 bits (573), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 137/482 (28%), Positives = 243/482 (50%), Gaps = 15/482 (3%)

Query: 71  PSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVE 130
           P+P + +FN++   + K        S + ++  +G LPD +T N LI+ +G      C E
Sbjct: 184 PAPNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGK-----CGE 238

Query: 131 NRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISK 190
             + E   L + M   G + DV+TY  LIN FC+ G +  A      M       G+++ 
Sbjct: 239 --LDEVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAM----KREGVMA- 291

Query: 191 TNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGL 250
            N+ ++S  +D+ CKEGLV +A +LF +M+ RG+       T LI G C AG  ++   L
Sbjct: 292 -NVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVL 350

Query: 251 FIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCL 310
             EM+  G   N++T+ V++D LCK  K+ EA  +L +M + G+  +   Y +L+ G+ +
Sbjct: 351 LDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFM 410

Query: 311 VGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVIT 370
               + A  +   M +KG +  +  Y  LI G C +  ++EA SL  ++  +G+    I 
Sbjct: 411 NKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYII 470

Query: 371 YNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLE 430
           Y T++   F++G+   A  +  ++     +P++ TY  LIDGLCK   + EA+  F+ + 
Sbjct: 471 YTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMR 530

Query: 431 MNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLE 490
               +  ++ +  L+DGLCK G L+ A +LF+++  KG+    V Y+ ++ G  ++G L 
Sbjct: 531 DLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLH 590

Query: 491 KANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSI 550
            A      M  +G   ++  +   + GF   N   +  E+  +M      + PD   ++ 
Sbjct: 591 DAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMI--GHGIAPDRAVYNC 648

Query: 551 VV 552
           ++
Sbjct: 649 LI 650



 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 136/450 (30%), Positives = 219/450 (48%), Gaps = 9/450 (2%)

Query: 150 PDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLV 209
           P+V T+  +I+  C+ G L+ A  L  +M     E G +   ++ +++ +ID   K G +
Sbjct: 186 PNVFTFNIVIDFLCKEGELAEARSLFSRM----KEMGCLP--DVVTFNSLIDGYGKCGEL 239

Query: 210 DKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVM 269
           D+ ++L  EM+  G    VV    LI+ FC  G  E   G F  M   G   N++TF+  
Sbjct: 240 DEVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTF 299

Query: 270 IDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGC 329
           +D  CK G + EA  L   M  RG+  + FTY  L+DG C  GR+D A  +   M  +G 
Sbjct: 300 VDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGV 359

Query: 330 KHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQK 389
              VV+Y +L++G CK   V EA  + R +   GVR   + Y TL+ G F    +  A  
Sbjct: 360 PLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALG 419

Query: 390 LFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLC 449
           L  EMK   +E D+S Y  LI GLC  + + EA  L   ++ +  E    I+  ++D   
Sbjct: 420 LLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACF 479

Query: 450 KAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVV 509
           K+G++  A  +  K+   G  P V+TY  +I GLC+ G +++A      M   G  PNV 
Sbjct: 480 KSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQ 539

Query: 510 TFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSK 569
            +  L+ G  +N   ++ V+L ++M     +L  D   ++ ++D   K    H+  A+  
Sbjct: 540 AYTALVDGLCKNGCLNEAVQLFNEMVHKGMSL--DKVVYTALLDGYLKQGNLHDAFALKA 597

Query: 570 SSYRACLYVTIFQPSSLGSMIGCTVRLMPQ 599
               + L + +F  +   S   C + +MP+
Sbjct: 598 KMIDSGLQLDLFCYTCFISGF-CNLNMMPE 626



 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 90/343 (26%), Positives = 151/343 (44%), Gaps = 47/343 (13%)

Query: 247 VNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMD 306
           V+ L    L LGPR + L   V              + LL ++  RGL         L D
Sbjct: 104 VDLLHRAALALGPRRSALASVV--------------DTLLSVLADRGL---------LDD 140

Query: 307 GYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQ 366
               V R+   RE+ +  +++ C H ++            L  + +  L R++       
Sbjct: 141 AVRAVARV---RELRVPPNTRTCNHILLR-----------LARDRSGRLVRRLFEQLPAP 186

Query: 367 TVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLF 426
            V T+N ++  L + G+   A+ LF  MK     PD+ T+N LIDG  K   + E  +L 
Sbjct: 187 NVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLV 246

Query: 427 HMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRK 486
             +  +  +  +  +N LI+  CK GR++ A+  F  + ++G++  VVT+S  +   C++
Sbjct: 247 EEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKE 306

Query: 487 GKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVP-DD 545
           G + +A      M   G A N  T+  L+ G  +  +    + LL +M    R  VP + 
Sbjct: 307 GLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMV---RQGVPLNV 363

Query: 546 TTFSIVVDLLAKDEKYHECSAV----SKSSYRA--CLYVTIFQ 582
            T++++VD L K+ K  E   V     K+  RA   LY T+  
Sbjct: 364 VTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIH 406


>gi|115471647|ref|NP_001059422.1| Os07g0300200 [Oryza sativa Japonica Group]
 gi|34394343|dbj|BAC84898.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|50509027|dbj|BAD31989.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|113610958|dbj|BAF21336.1| Os07g0300200 [Oryza sativa Japonica Group]
          Length = 1013

 Score =  225 bits (573), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 157/547 (28%), Positives = 256/547 (46%), Gaps = 53/547 (9%)

Query: 57  NEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNIL 116
           NEA+     M+  +  P +  +  L     +  + D      +++V+ G+ P+ +T + L
Sbjct: 331 NEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNL 390

Query: 117 INCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHK 176
           +       RGLC   ++  A+ L K M+    RPD ITY  +I G  R  +   A RL  
Sbjct: 391 V-------RGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLS 443

Query: 177 KMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIH 236
           +M     EN  IS  N+++YSI+I  LC+ G  +KA +L  EM  +G+ P   V   LI 
Sbjct: 444 EM-----ENAGIS-PNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLIS 497

Query: 237 GFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNP 296
           G+C  GN      +F +M  +   P+L  +N +I  L K G++ E+      M +RGL P
Sbjct: 498 GYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLP 557

Query: 297 DRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLY 356
           + FTY+ L+ GY   G +++A ++   M   G K   V Y  L+  Y K  ++E+  S +
Sbjct: 558 NEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTF 617

Query: 357 RQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKN 416
           + ++  GV      Y  L+  L  +G    A ++   ++     PD+  Y+ LI GLCK 
Sbjct: 618 KSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKT 677

Query: 417 NCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTY 476
              ++A  +   +     +  I  +N LIDGLCK+G +  A  +F+ +  KGLVP  VTY
Sbjct: 678 ADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTY 737

Query: 477 SIMIHGLCRKGKLEKANDFLLYME----------------KNGCA--------------- 505
           + +I G C+ G +  +N F LY E                  GC+               
Sbjct: 738 TSLIDGSCKVGDI--SNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEM 795

Query: 506 -----PNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEK 560
                 ++ +FN L+ GF +  K  + ++LLH +    R LVP+  T   ++  L++  K
Sbjct: 796 FLRGHASISSFNNLVDGFCKRGKMQETLKLLHVIM--GRGLVPNALTIENIISGLSEAGK 853

Query: 561 YHECSAV 567
             E   +
Sbjct: 854 LSEVHTI 860



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 147/554 (26%), Positives = 262/554 (47%), Gaps = 41/554 (7%)

Query: 18  KVKLSSLFKSPRQIAAVSSPETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISS 77
           K+ L   + S  Q+A  +             C   + NL  A      M    PSPP+  
Sbjct: 102 KLLLDFFYWSSPQLAPSAPAPDAFAHLAMSLCAGSLFNL--ANGLLIKMIRAYPSPPV-- 157

Query: 78  FNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEAT 137
                           + S +R L   G     + L++L++ +  K+ G     R+++A 
Sbjct: 158 ---------------VLASIHRALSDSGHRSPAV-LDVLVDTY--KKSG-----RVQDAA 194

Query: 138 WLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYS 197
            +   M   G+ P +     L+    R   +++  ++ + MV      G     ++++YS
Sbjct: 195 EVVLMMRDRGMAPSIRCCNALLKDLLRADAMALLWKVREFMV------GAGISPDVYTYS 248

Query: 198 IIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDL 257
            +I++ CK    D AK++ +EM+ RG     V    LI G C +G  EE  G   +M D 
Sbjct: 249 TLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDY 308

Query: 258 GPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTA 317
           G  P+  T+  +I+ LCK  + NEA  LL+ M    L P+   Y +L+DG+   G  D A
Sbjct: 309 GLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEA 368

Query: 318 REIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSG 377
            ++   M + G +   ++Y+ L+ G CK+  ++ A  L +Q++ +  R   ITYN ++ G
Sbjct: 369 FKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEG 428

Query: 378 LFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFG 437
            F+      A +L  EM+   + P++ TY+I+I GLC++   ++A  L   +     +  
Sbjct: 429 HFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPN 488

Query: 438 IEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLL 497
             ++  LI G C+ G +  A E+F K+ +  ++P +  Y+ +I GL + G++E++  +  
Sbjct: 489 AFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFA 548

Query: 498 YMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAK 557
            M++ G  PN  T++ L+HG+L+N       +L+ +M   +  L P+D    I +DLL  
Sbjct: 549 QMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRML--DTGLKPNDV---IYIDLL-- 601

Query: 558 DEKYHECSAVSKSS 571
            E Y +   + K S
Sbjct: 602 -ESYFKSDDIEKVS 614



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 157/638 (24%), Positives = 262/638 (41%), Gaps = 144/638 (22%)

Query: 25  FKSPRQIAAVSSPETQLNEFLHEN-----CKSGIINLNEARYFFGYMTHMQPSPPISSFN 79
           FK  +++ A      Q N+  ++N     CK G   ++ A      M      P   ++N
Sbjct: 369 FKMIKEMVAAG---VQPNKITYDNLVRGLCKMG--QMDRASLLLKQMVRDSHRPDTITYN 423

Query: 80  LLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWL 139
           L+     ++           ++ + G+ P+  T +I+I+       GLC     ++A+ L
Sbjct: 424 LIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIH-------GLCQSGEPEKASDL 476

Query: 140 FKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMV-------------------- 179
            + M   G++P+   Y  LI+G+CR GN+S+A  +  KM                     
Sbjct: 477 LEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSK 536

Query: 180 ------SGDY-----ENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
                 S  Y     E GL+   N F+YS +I    K G ++ A++L   M   G+ P  
Sbjct: 537 VGRVEESTKYFAQMQERGLL--PNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPND 594

Query: 229 VVCTTLIHGFCCAGNWEEVNGLFIEMLDLG------------------------------ 258
           V+   L+  +  + + E+V+  F  MLD G                              
Sbjct: 595 VIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSG 654

Query: 259 -----PRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGR 313
                  P++  ++ +I  LCK     +A G+L+ M ++G++P+   YN+L+DG C  G 
Sbjct: 655 IEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGD 714

Query: 314 IDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNT 373
           I  AR +F S+ +KG     V+Y  LI+G CK+ ++  A  LY ++++ G+      Y+ 
Sbjct: 715 ISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSV 774

Query: 374 LLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNK 433
           L +G   AG    A  L +EM L      +S++N L+DG CK   +QE +KL H++    
Sbjct: 775 LTTGCSSAGDLEQAMFLIEEMFLRG-HASISSFNNLVDGFCKRGKMQETLKLLHVIMGRG 833

Query: 434 FEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQK-------------------GLVPTVV 474
                     +I GL +AG+L     +F +L QK                   G +P  V
Sbjct: 834 LVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMINQGKIPLDV 893

Query: 475 ----------------------------------TYSIMIHGLCRKGKLEKANDFLLYME 500
                                             +Y  ++  LCRKGKL +A + L  M+
Sbjct: 894 VDDMIRDHCKEGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCRKGKLSEALNLLKEMD 953

Query: 501 KNGCAPN-----VVTFNTLMHGFLQNNKTSKVVELLHK 533
           K G  P+     ++  N    G++Q + T     L HK
Sbjct: 954 KRGICPSENQCLILLTNLHTSGYIQEHNTVLDNMLCHK 991


>gi|53793262|dbj|BAD54485.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
          Length = 713

 Score =  225 bits (573), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 137/482 (28%), Positives = 243/482 (50%), Gaps = 15/482 (3%)

Query: 71  PSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVE 130
           P+P + +FN++   + K        S + ++  +G LPD +T N LI+ +G      C E
Sbjct: 184 PAPNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGK-----CGE 238

Query: 131 NRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISK 190
             + E   L + M   G + DV+TY  LIN FC+ G +  A      M       G+++ 
Sbjct: 239 --LDEVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAM----KREGVMA- 291

Query: 191 TNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGL 250
            N+ ++S  +D+ CKEGLV +A +LF +M+ RG+       T LI G C AG  ++   L
Sbjct: 292 -NVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVL 350

Query: 251 FIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCL 310
             EM+  G   N++T+ V++D LCK  K+ EA  +L +M + G+  +   Y +L+ G+ +
Sbjct: 351 LDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFM 410

Query: 311 VGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVIT 370
               + A  +   M +KG +  +  Y  LI G C +  ++EA SL  ++  +G+    I 
Sbjct: 411 NKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYII 470

Query: 371 YNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLE 430
           Y T++   F++G+   A  +  ++     +P++ TY  LIDGLCK   + EA+  F+ + 
Sbjct: 471 YTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMR 530

Query: 431 MNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLE 490
               +  ++ +  L+DGLCK G L+ A +LF+++  KG+    V Y+ ++ G  ++G L 
Sbjct: 531 DLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLH 590

Query: 491 KANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSI 550
            A      M  +G   ++  +   + GF   N   +  E+  +M      + PD   ++ 
Sbjct: 591 DAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMI--GHGIAPDRAVYNC 648

Query: 551 VV 552
           ++
Sbjct: 649 LI 650



 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 136/450 (30%), Positives = 219/450 (48%), Gaps = 9/450 (2%)

Query: 150 PDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLV 209
           P+V T+  +I+  C+ G L+ A  L  +M     E G +   ++ +++ +ID   K G +
Sbjct: 186 PNVFTFNIVIDFLCKEGELAEARSLFSRM----KEMGCLP--DVVTFNSLIDGYGKCGEL 239

Query: 210 DKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVM 269
           D+ ++L  EM+  G    VV    LI+ FC  G  E   G F  M   G   N++TF+  
Sbjct: 240 DEVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTF 299

Query: 270 IDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGC 329
           +D  CK G + EA  L   M  RG+  + FTY  L+DG C  GR+D A  +   M  +G 
Sbjct: 300 VDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGV 359

Query: 330 KHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQK 389
              VV+Y +L++G CK   V EA  + R +   GVR   + Y TL+ G F    +  A  
Sbjct: 360 PLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALG 419

Query: 390 LFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLC 449
           L  EMK   +E D+S Y  LI GLC  + + EA  L   ++ +  E    I+  ++D   
Sbjct: 420 LLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACF 479

Query: 450 KAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVV 509
           K+G++  A  +  K+   G  P V+TY  +I GLC+ G +++A      M   G  PNV 
Sbjct: 480 KSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQ 539

Query: 510 TFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSK 569
            +  L+ G  +N   ++ V+L ++M     +L  D   ++ ++D   K    H+  A+  
Sbjct: 540 AYTALVDGLCKNGCLNEAVQLFNEMVHKGMSL--DKVVYTALLDGYLKQGNLHDAFALKA 597

Query: 570 SSYRACLYVTIFQPSSLGSMIGCTVRLMPQ 599
               + L + +F  +   S   C + +MP+
Sbjct: 598 KMIDSGLQLDLFCYTCFISGF-CNLNMMPE 626



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 90/343 (26%), Positives = 151/343 (44%), Gaps = 47/343 (13%)

Query: 247 VNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMD 306
           V+ L    L LGPR + L   V              + LL ++  RGL         L D
Sbjct: 104 VDLLHRAALALGPRRSALASVV--------------DTLLSVLADRGL---------LDD 140

Query: 307 GYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQ 366
               V R+   RE+ +  +++ C H ++            L  + +  L R++       
Sbjct: 141 AVRAVARV---RELRVPPNTRTCNHILLR-----------LARDRSGRLVRRLFEQLPAP 186

Query: 367 TVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLF 426
            V T+N ++  L + G+   A+ LF  MK     PD+ T+N LIDG  K   + E  +L 
Sbjct: 187 NVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLV 246

Query: 427 HMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRK 486
             +  +  +  +  +N LI+  CK GR++ A+  F  + ++G++  VVT+S  +   C++
Sbjct: 247 EEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKE 306

Query: 487 GKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVP-DD 545
           G + +A      M   G A N  T+  L+ G  +  +    + LL +M    R  VP + 
Sbjct: 307 GLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMV---RQGVPLNV 363

Query: 546 TTFSIVVDLLAKDEKYHECSAV----SKSSYRA--CLYVTIFQ 582
            T++++VD L K+ K  E   V     K+  RA   LY T+  
Sbjct: 364 VTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIH 406


>gi|357117807|ref|XP_003560653.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Brachypodium distachyon]
          Length = 692

 Score =  225 bits (573), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 139/483 (28%), Positives = 242/483 (50%), Gaps = 15/483 (3%)

Query: 71  PSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVE 130
           P+P + +FN++   + K        +   ++ +IG  PD +T N LI+ +G      C E
Sbjct: 190 PAPNVFTFNIMIDFLCKEGDLAEARALLARMKAIGCSPDVVTYNSLIDGYGK-----CGE 244

Query: 131 NRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISK 190
             ++E   L   M   G RPDV+TY  L+N FC+ G +  A     +M       G+++ 
Sbjct: 245 --LEEVEKLVGEMRGCGCRPDVVTYNALVNCFCKFGRMERAYSYFAEM----KREGVMA- 297

Query: 191 TNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGL 250
            N+ ++S  +D+ CK G+V +A +LF +M+ +G+ P  V  T L+ G C AG  ++   L
Sbjct: 298 -NVVTFSTFVDAFCKNGMVREAMKLFAQMRMKGMKPNEVTYTCLVDGTCKAGRLDDALVL 356

Query: 251 FIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCL 310
             EM+  G   N++T+ V++D LCK GK+ EA  +  LM + G+  +   Y +L+ G+ +
Sbjct: 357 TNEMVQQGVPLNVVTYTVLVDGLCKEGKVAEAEDVFRLMERAGIRANELLYTTLIHGHFV 416

Query: 311 VGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVIT 370
               + A  +   M  KG +  V  Y  LI G C +  ++EA SL  ++   G++   + 
Sbjct: 417 YKNSERALSLLSEMKDKGMELDVSLYGALIWGLCNLQKLDEAKSLLNKMDECGLKPNNVI 476

Query: 371 YNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLE 430
           Y  ++   F+A +   A  L  +M      P++ TY  L+DGLCK   + EA+  F+ + 
Sbjct: 477 YTNIMDACFKARKESEAIALLQKMMDSGFRPNIVTYCALVDGLCKAGSIDEAISHFNKMV 536

Query: 431 MNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLE 490
               E  ++ +  L+DGLCK GRLD A  L  ++  KG+    V  + ++ G  ++G L+
Sbjct: 537 DLGLEPNVQAYTALVDGLCKNGRLDKAVLLLDEMIDKGMSLDNVVCTSLMDGHLKQGNLQ 596

Query: 491 KANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSI 550
            A      M  +G   ++  +   + GF   N   +  E+L +M   E  + PD   ++ 
Sbjct: 597 DAFALKAKMINSGLQLDLYGYTCFVWGFCNLNMIQEAREVLSEMI--ENGITPDAVVYNC 654

Query: 551 VVD 553
           +++
Sbjct: 655 LIN 657



 Score =  208 bits (529), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 136/446 (30%), Positives = 217/446 (48%), Gaps = 20/446 (4%)

Query: 92  DAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATW-LFKNMIAFGVRP 150
           DAV++  R +  + + P+  T N ++ C   +        R  E  W LF+ + A    P
Sbjct: 146 DAVLALAR-VRELRVPPNTRTCNHILLCLARE--------RSSELAWRLFEQLPA----P 192

Query: 151 DVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVD 210
           +V T+  +I+  C+ G+L+ A  L  +M        +    ++ +Y+ +ID   K G ++
Sbjct: 193 NVFTFNIMIDFLCKEGDLAEARALLARM------KAIGCSPDVVTYNSLIDGYGKCGELE 246

Query: 211 KAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMI 270
           + ++L  EM+G G  P VV    L++ FC  G  E     F EM   G   N++TF+  +
Sbjct: 247 EVEKLVGEMRGCGCRPDVVTYNALVNCFCKFGRMERAYSYFAEMKREGVMANVVTFSTFV 306

Query: 271 DCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCK 330
           D  CK G + EA  L   M  +G+ P+  TY  L+DG C  GR+D A  +   M  +G  
Sbjct: 307 DAFCKNGMVREAMKLFAQMRMKGMKPNEVTYTCLVDGTCKAGRLDDALVLTNEMVQQGVP 366

Query: 331 HTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKL 390
             VV+Y +L++G CK   V EA  ++R +   G+R   + Y TL+ G F    +  A  L
Sbjct: 367 LNVVTYTVLVDGLCKEGKVAEAEDVFRLMERAGIRANELLYTTLIHGHFVYKNSERALSL 426

Query: 391 FDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCK 450
             EMK   +E D+S Y  LI GLC    + EA  L + ++    +    I+  ++D   K
Sbjct: 427 LSEMKDKGMELDVSLYGALIWGLCNLQKLDEAKSLLNKMDECGLKPNNVIYTNIMDACFK 486

Query: 451 AGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVT 510
           A +   A  L  K+   G  P +VTY  ++ GLC+ G +++A      M   G  PNV  
Sbjct: 487 ARKESEAIALLQKMMDSGFRPNIVTYCALVDGLCKAGSIDEAISHFNKMVDLGLEPNVQA 546

Query: 511 FNTLMHGFLQNNKTSKVVELLHKMAE 536
           +  L+ G  +N +  K V LL +M +
Sbjct: 547 YTALVDGLCKNGRLDKAVLLLDEMID 572



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 136/473 (28%), Positives = 223/473 (47%), Gaps = 38/473 (8%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CK G  +L EAR     M  +  SP + ++N L     K    + V     ++   G  P
Sbjct: 205 CKEG--DLAEARALLARMKAIGCSPDVVTYNSLIDGYGKCGELEEVEKLVGEMRGCGCRP 262

Query: 109 DFLTLNILINCF---GNKERG-------------------------LCVENRIKEATWLF 140
           D +T N L+NCF   G  ER                           C    ++EA  LF
Sbjct: 263 DVVTYNALVNCFCKFGRMERAYSYFAEMKREGVMANVVTFSTFVDAFCKNGMVREAMKLF 322

Query: 141 KNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIII 200
             M   G++P+ +TY  L++G C+ G L  AL L  +MV    + G+    N+ +Y++++
Sbjct: 323 AQMRMKGMKPNEVTYTCLVDGTCKAGRLDDALVLTNEMV----QQGV--PLNVVTYTVLV 376

Query: 201 DSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPR 260
           D LCKEG V +A+++F  M+  GI    ++ TTLIHG     N E    L  EM D G  
Sbjct: 377 DGLCKEGKVAEAEDVFRLMERAGIRANELLYTTLIHGHFVYKNSERALSLLSEMKDKGME 436

Query: 261 PNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDT-ARE 319
            ++  +  +I  LC   K++EA  LL  M + GL P+   Y ++MD  C   R ++ A  
Sbjct: 437 LDVSLYGALIWGLCNLQKLDEAKSLLNKMDECGLKPNNVIYTNIMDA-CFKARKESEAIA 495

Query: 320 IFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLF 379
           +   M   G +  +V+Y  L++G CK  +++EA+S + +++  G+   V  Y  L+ GL 
Sbjct: 496 LLQKMMDSGFRPNIVTYCALVDGLCKAGSIDEAISHFNKMVDLGLEPNVQAYTALVDGLC 555

Query: 380 QAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIE 439
           + G+   A  L DEM    +  D      L+DG  K   +Q+A  L   +  +  +  + 
Sbjct: 556 KNGRLDKAVLLLDEMIDKGMSLDNVVCTSLMDGHLKQGNLQDAFALKAKMINSGLQLDLY 615

Query: 440 IFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKA 492
            + C + G C    +  A E+  ++ + G+ P  V Y+ +I+   + G +E+A
Sbjct: 616 GYTCFVWGFCNLNMIQEAREVLSEMIENGITPDAVVYNCLINKCQKLGNMEEA 668



 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 109/387 (28%), Positives = 181/387 (46%), Gaps = 15/387 (3%)

Query: 44  FLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVS 103
           F+   CK+G++   EA   F  M      P   ++  L     K    D  +    ++V 
Sbjct: 305 FVDAFCKNGMVR--EAMKLFAQMRMKGMKPNEVTYTCLVDGTCKAGRLDDALVLTNEMVQ 362

Query: 104 IGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFC 163
            G+  + +T  +L++       GLC E ++ EA  +F+ M   G+R + + Y TLI+G  
Sbjct: 363 QGVPLNVVTYTVLVD-------GLCKEGKVAEAEDVFRLMERAGIRANELLYTTLIHGHF 415

Query: 164 RTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRG 223
              N   AL L  +M     E       ++  Y  +I  LC    +D+AK L  +M   G
Sbjct: 416 VYKNSERALSLLSEMKDKGME------LDVSLYGALIWGLCNLQKLDEAKSLLNKMDECG 469

Query: 224 INPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEAN 283
           + P  V+ T ++     A    E   L  +M+D G RPN++T+  ++D LCK G I+EA 
Sbjct: 470 LKPNNVIYTNIMDACFKARKESEAIALLQKMMDSGFRPNIVTYCALVDGLCKAGSIDEAI 529

Query: 284 GLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGY 343
                M+  GL P+   Y +L+DG C  GR+D A  +   M  KG     V    L++G+
Sbjct: 530 SHFNKMVDLGLEPNVQAYTALVDGLCKNGRLDKAVLLLDEMIDKGMSLDNVVCTSLMDGH 589

Query: 344 CKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDL 403
            K  N+++A +L  ++I++G++  +  Y   + G         A+++  EM    + PD 
Sbjct: 590 LKQGNLQDAFALKAKMINSGLQLDLYGYTCFVWGFCNLNMIQEAREVLSEMIENGITPDA 649

Query: 404 STYNILIDGLCKNNCVQEAVKLFHMLE 430
             YN LI+   K   ++EA  L + +E
Sbjct: 650 VVYNCLINKCQKLGNMEEAAILQNEME 676



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 73/245 (29%), Positives = 117/245 (47%), Gaps = 6/245 (2%)

Query: 117 INCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHK 176
           ++ +G    GLC   ++ EA  L   M   G++P+ + Y  +++   +    S A+ L +
Sbjct: 439 VSLYGALIWGLCNLQKLDEAKSLLNKMDECGLKPNNVIYTNIMDACFKARKESEAIALLQ 498

Query: 177 KMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIH 236
           KM+   +      + NI +Y  ++D LCK G +D+A   F +M   G+ P V   T L+ 
Sbjct: 499 KMMDSGF------RPNIVTYCALVDGLCKAGSIDEAISHFNKMVDLGLEPNVQAYTALVD 552

Query: 237 GFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNP 296
           G C  G  ++   L  EM+D G   + +    ++D   K G + +A  L   MI  GL  
Sbjct: 553 GLCKNGRLDKAVLLLDEMIDKGMSLDNVVCTSLMDGHLKQGNLQDAFALKAKMINSGLQL 612

Query: 297 DRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLY 356
           D + Y   + G+C +  I  ARE+   M   G     V YN LIN   K+ N+EEA  L 
Sbjct: 613 DLYGYTCFVWGFCNLNMIQEAREVLSEMIENGITPDAVVYNCLINKCQKLGNMEEAAILQ 672

Query: 357 RQIIS 361
            ++ S
Sbjct: 673 NEMES 677



 Score = 75.1 bits (183), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 55/185 (29%), Positives = 87/185 (47%), Gaps = 13/185 (7%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
           P I ++  L   + K    D  IS + K+V +GL P+      L++       GLC   R
Sbjct: 507 PNIVTYCALVDGLCKAGSIDEAISHFNKMVDLGLEPNVQAYTALVD-------GLCKNGR 559

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
           + +A  L   MI  G+  D +   +L++G  + GNL  A  L  KM++    +GL  + +
Sbjct: 560 LDKAVLLLDEMIDKGMSLDNVVCTSLMDGHLKQGNLQDAFALKAKMIN----SGL--QLD 613

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
           ++ Y+  +   C   ++ +A+E+  EM   GI P  VV   LI+     GN EE   L  
Sbjct: 614 LYGYTCFVWGFCNLNMIQEAREVLSEMIENGITPDAVVYNCLINKCQKLGNMEEAAILQN 673

Query: 253 EMLDL 257
           EM  L
Sbjct: 674 EMESL 678


>gi|168014206|ref|XP_001759643.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162689182|gb|EDQ75555.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 1043

 Score =  225 bits (573), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 142/459 (30%), Positives = 237/459 (51%), Gaps = 13/459 (2%)

Query: 56   LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNI 115
            L+EA      M      P + +++ L  +  K    +  +S + ++V  G + D  T ++
Sbjct: 579  LDEAVSLLREMEKQGCEPSVVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVADVSTYSL 638

Query: 116  LINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLH 175
            +INC       LC  + + +A  +F  M   G+ P +  Y TL++   +   +  AL++ 
Sbjct: 639  VINC-------LCKSDDVDQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIF 691

Query: 176  KKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLI 235
             ++     E+ L+  T  F Y+I+++ L K   VD+A +L   MK + I P +   T+L+
Sbjct: 692  NEL----QESSLVPDT--FVYNIMVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLL 745

Query: 236  HGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLN 295
             G   +G  EE   +F +M + G  P+++ +  ++D L KGGK++ A  +   M ++   
Sbjct: 746  DGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRCV 805

Query: 296  PDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSL 355
            PD  TY+SL+D     GR++ A   F +  SKGC   V  Y+ LI+ + K   V+ A+ L
Sbjct: 806  PDVVTYSSLIDSLGKEGRVEEAYYFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRALEL 865

Query: 356  YRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCK 415
            + ++        ++TYN LLSGL +AG+   A+KL +EM+     PDL TYNILIDG+ K
Sbjct: 866  FEEMQRRQCPPNIVTYNNLLSGLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNILIDGVGK 925

Query: 416  NNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVT 475
               V EA   F  ++       +  F  LI+ L K  +L  A ELF  + ++G  P+VVT
Sbjct: 926  MGMVDEAESYFKRMKEKGIVPDVITFTSLIESLGKVDKLLEACELFDSMEEEGYNPSVVT 985

Query: 476  YSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTL 514
            Y+++I  L R GK+ +A      M+  GC P+ +T   +
Sbjct: 986  YNVLIDILGRAGKVHEAAMIFHEMKVKGCMPDGITIGIM 1024



 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 138/491 (28%), Positives = 247/491 (50%), Gaps = 15/491 (3%)

Query: 77   SFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEA 136
            ++N L  A   N H D  +     +     +P  +T   L++       GL    R+ EA
Sbjct: 530  TYNTLMSAFIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVD-------GLGKAGRLDEA 582

Query: 137  TWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSY 196
              L + M   G  P V+TY +L+  F +      +L L  +MV      G ++  ++ +Y
Sbjct: 583  VSLLREMEKQGCEPSVVTYSSLMASFYKRDQEEESLSLFDEMV----RKGCVA--DVSTY 636

Query: 197  SIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLD 256
            S++I+ LCK   VD+A ++F  MK  G+ P +    TL+         +    +F E+ +
Sbjct: 637  SLVINCLCKSDDVDQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQE 696

Query: 257  LGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDT 316
                P+   +N+M++ L K  +++EA  L++ M  + + PD FTY SL+DG    GR++ 
Sbjct: 697  SSLVPDTFVYNIMVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEE 756

Query: 317  AREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLS 376
            A  +F  M  +G +  VV+Y  L++   K   +  A+ ++R +        V+TY++L+ 
Sbjct: 757  AFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYSSLID 816

Query: 377  GLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEF 436
             L + G+   A   F+        P++  Y+ LID   K   V  A++LF  ++  +   
Sbjct: 817  SLGKEGRVEEAYYFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQCPP 876

Query: 437  GIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFL 496
             I  +N L+ GL KAGRL+ A +L  ++ + G VP +VTY+I+I G+ + G +++A  + 
Sbjct: 877  NIVTYNNLLSGLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNILIDGVGKMGMVDEAESYF 936

Query: 497  LYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLA 556
              M++ G  P+V+TF +L+    + +K  +  EL   M E   N  P   T+++++D+L 
Sbjct: 937  KRMKEKGIVPDVITFTSLIESLGKVDKLLEACELFDSMEEEGYN--PSVVTYNVLIDILG 994

Query: 557  KDEKYHECSAV 567
            +  K HE + +
Sbjct: 995  RAGKVHEAAMI 1005



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 146/564 (25%), Positives = 261/564 (46%), Gaps = 36/564 (6%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGN---------- 122
           P + ++N++   + K          +  L   G +PD  T N LI+  G           
Sbjct: 425 PNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGAVPDVFTYNTLIDVLGKGGQMDKVLAI 484

Query: 123 -----KERGLCVENRIKEATWLFKNMIAFGVR----PDV-------ITYGTLINGFCRTG 166
                ++ G C+ +R   A    +  I    R    P +       ITY TL++ F   G
Sbjct: 485 IKEMVEKGGECIISRDSNAG--HEGTIEGADRTVEYPSLGFKSLGEITYNTLMSAFIHNG 542

Query: 167 NLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINP 226
           ++  A++L + M   +          + +Y+ ++D L K G +D+A  L  EM+ +G  P
Sbjct: 543 HVDEAVKLLEVMKKHE------CIPTVVTYTTLVDGLGKAGRLDEAVSLLREMEKQGCEP 596

Query: 227 AVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLL 286
           +VV  ++L+  F      EE   LF EM+  G   ++ T++++I+CLCK   +++A  + 
Sbjct: 597 SVVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVADVSTYSLVINCLCKSDDVDQALDVF 656

Query: 287 ELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKI 346
             M + G+ P    Y +L+       +ID A +IF  +           YNI++NG  K 
Sbjct: 657 GRMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPDTFVYNIMVNGLVKS 716

Query: 347 LNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTY 406
             V+EA  L   + +  +   + TY +LL GL ++G+   A  +F +M     EPD+  Y
Sbjct: 717 NRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAY 776

Query: 407 NILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQ 466
             L+D L K   +  A+ +F  +   +    +  ++ LID L K GR++ A+  F     
Sbjct: 777 TSLMDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYSSLIDSLGKEGRVEEAYYFFENSIS 836

Query: 467 KGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSK 526
           KG  P V  YS +I    +KG +++A +    M++  C PN+VT+N L+ G  +  + + 
Sbjct: 837 KGCTPNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQCPPNIVTYNNLLSGLAKAGRLNV 896

Query: 527 VVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKSSYRACLYVTIFQPSSL 586
             +LL +M +     VPD  T++I++D + K     E  +  K      +   +   +SL
Sbjct: 897 AEKLLEEMEKV--GCVPDLVTYNILIDGVGKMGMVDEAESYFKRMKEKGIVPDVITFTSL 954

Query: 587 GSMIGCTVRLMPQPEMSDTLGDDG 610
              +G   +L+   E+ D++ ++G
Sbjct: 955 IESLGKVDKLLEACELFDSMEEEG 978



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 156/616 (25%), Positives = 280/616 (45%), Gaps = 68/616 (11%)

Query: 55  NLNEARYFFGYMTHMQP-SPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTL 113
           +L+ A+ FF +       S  + ++ L+   +A  +  DAV+     +   G       L
Sbjct: 161 DLHLAKCFFTWAGQQDGYSHTVGTYTLMIKRLAGAQETDAVVQILTAMWKEGHRISMHLL 220

Query: 114 NILINCFG---NKERGLCVENRIKE-------------------------ATWLFKNMIA 145
             L+  FG   N    L + N++K                          A  +F  +  
Sbjct: 221 TSLLRTFGSTNNVSGALEIFNQMKSFGCNPSTNMYNFVLELLVKGGFYHSAVIVFGKLGQ 280

Query: 146 FGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCK 205
           F ++PD  T+   ++ F R+G L  A    ++M+    + G      + +++++ID+L K
Sbjct: 281 FRIQPDAQTFRIFVHSFNRSGRLDPAAEPIQEMIKSGIDPG------VHTFTVLIDALVK 334

Query: 206 EGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLT 265
            G +D+A + F  MK    +P VV  TTL++G   AG  EE   +F+EM +    P+ + 
Sbjct: 335 SGNIDEACKFFNGMKNLRCSPNVVTYTTLVNGLAKAGRLEEACEVFVEMKENNCSPDAIA 394

Query: 266 FNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMH 325
           +N +ID L K G+ + A GL + M  RGL P+  TYN ++      GR   A ++F  + 
Sbjct: 395 YNTLIDGLGKAGEADMACGLFKEMKDRGLVPNLRTYNIMISVLGKAGRQPEAWQLFHDLK 454

Query: 326 SKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIIS-------------------NGVRQ 366
            +G    V +YN LI+   K   +++ +++ ++++                     G  +
Sbjct: 455 EQGAVPDVFTYNTLIDVLGKGGQMDKVLAIIKEMVEKGGECIISRDSNAGHEGTIEGADR 514

Query: 367 TV------------ITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLC 414
           TV            ITYNTL+S     G    A KL + MK +   P + TY  L+DGL 
Sbjct: 515 TVEYPSLGFKSLGEITYNTLMSAFIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVDGLG 574

Query: 415 KNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVV 474
           K   + EAV L   +E    E  +  ++ L+    K  + + +  LF ++ +KG V  V 
Sbjct: 575 KAGRLDEAVSLLREMEKQGCEPSVVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVADVS 634

Query: 475 TYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKM 534
           TYS++I+ LC+   +++A D    M++ G  P +  + TL+   +++ K    +++ +++
Sbjct: 635 TYSLVINCLCKSDDVDQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNEL 694

Query: 535 AEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKSSYRACLYVTIFQPSSLGSMIGCTV 594
            E   +LVPD   ++I+V+ L K  +  E   +  S     +   +F  +SL   +G + 
Sbjct: 695 QES--SLVPDTFVYNIMVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSG 752

Query: 595 RLMPQPEMSDTLGDDG 610
           RL     M   + ++G
Sbjct: 753 RLEEAFNMFTKMTEEG 768


>gi|224103543|ref|XP_002313097.1| predicted protein [Populus trichocarpa]
 gi|222849505|gb|EEE87052.1| predicted protein [Populus trichocarpa]
          Length = 751

 Score =  225 bits (573), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 138/453 (30%), Positives = 238/453 (52%), Gaps = 22/453 (4%)

Query: 105 GLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCR 164
           G +P  L+ N +++      + +    ++      ++ MIA GV  +V +Y  LI GFC 
Sbjct: 162 GFMPGVLSYNAILDSIVRCRKPVIFAEKV------YREMIASGVSLNVFSYNILIRGFCA 215

Query: 165 TGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGI 224
            GNL + LR  ++M             N+ +Y+ +I + CK   +D+A +L   M   G+
Sbjct: 216 AGNLEMGLRFFEEMERNR------CLPNVVTYNTVIGAYCKLKRIDEAFKLLRSMGLEGL 269

Query: 225 NPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANG 284
            P ++    +I+G C  G  EE +G+  EM   G  P+ +T+N +++  CK G  ++A  
Sbjct: 270 EPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAPDGVTYNTLVNGYCKVGNFHQALV 329

Query: 285 LLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYC 344
           L   M++ GL PD  TY SL++  C  G ++ A E F  MH +G +   V+Y  LING+ 
Sbjct: 330 LHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRGLRPNGVTYTSLINGFS 389

Query: 345 KILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLS 404
           +   ++EA  ++ ++I +G   T++TYN LL+G   +G+   A  L   M+   + PD+ 
Sbjct: 390 QKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKGLSPDVV 449

Query: 405 TYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIE----IFNCLIDGLCKAGRLDNAWEL 460
           +Y+ +I G C+    QE  + F M      E G+      ++ LI GLC+  RL+ A +L
Sbjct: 450 SYSTIIAGFCR---YQELDRAFQM-NAEMVEKGVSPDAITYSSLIQGLCEQRRLNEACDL 505

Query: 461 FHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQ 520
           F ++  K L+P   TY+ +I+G C++G L +A +    M K G  P+ VT+N L++G  +
Sbjct: 506 FQEMLNKSLLPDEFTYTSLINGYCKEGDLNEALNLHDEMIKKGFLPDTVTYNVLINGLNK 565

Query: 521 NNKTSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
             +T +   LL K+   E   +P+  T+  +++
Sbjct: 566 QARTREAKRLLLKLFYDES--IPNGITYDTLIE 596



 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 121/374 (32%), Positives = 213/374 (56%), Gaps = 5/374 (1%)

Query: 193 IFSYSIIIDSL--CKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGL 250
           + SY+ I+DS+  C++ ++  A++++ EM   G++  V     LI GFC AGN E     
Sbjct: 167 VLSYNAILDSIVRCRKPVI-FAEKVYREMIASGVSLNVFSYNILIRGFCAAGNLEMGLRF 225

Query: 251 FIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCL 310
           F EM      PN++T+N +I   CK  +I+EA  LL  M   GL P+  TYN +++G C 
Sbjct: 226 FEEMERNRCLPNVVTYNTVIGAYCKLKRIDEAFKLLRSMGLEGLEPNLLTYNMVINGLCR 285

Query: 311 VGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVIT 370
           VGRI+    +   M  KG     V+YN L+NGYCK+ N  +A+ L+ +++ NG+   V+T
Sbjct: 286 VGRIEETSGVLAEMDRKGFAPDGVTYNTLVNGYCKVGNFHQALVLHSEMLRNGLPPDVVT 345

Query: 371 YNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLE 430
           Y +L++ + +AG    A + FD+M +  + P+  TY  LI+G  +   + EA +++  + 
Sbjct: 346 YTSLINTMCKAGNLNRAMEFFDQMHVRGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEMI 405

Query: 431 MNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLE 490
            + F   I  +N L++G C +GR++ A  L   +  KGL P VV+YS +I G CR  +L+
Sbjct: 406 RSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELD 465

Query: 491 KANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSI 550
           +A      M + G +P+ +T+++L+ G  +  + ++  +L  +M    ++L+PD+ T++ 
Sbjct: 466 RAFQMNAEMVEKGVSPDAITYSSLIQGLCEQRRLNEACDLFQEML--NKSLLPDEFTYTS 523

Query: 551 VVDLLAKDEKYHEC 564
           +++   K+   +E 
Sbjct: 524 LINGYCKEGDLNEA 537



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 125/419 (29%), Positives = 219/419 (52%), Gaps = 9/419 (2%)

Query: 147 GVRPDVITYGTLINGFCRTGNLSV-ALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCK 205
           G  P V++Y  +++   R     + A +++++M++           N+FSY+I+I   C 
Sbjct: 162 GFMPGVLSYNAILDSIVRCRKPVIFAEKVYREMIASGV------SLNVFSYNILIRGFCA 215

Query: 206 EGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLT 265
            G ++     F EM+     P VV   T+I  +C     +E   L   M   G  PNLLT
Sbjct: 216 AGNLEMGLRFFEEMERNRCLPNVVTYNTVIGAYCKLKRIDEAFKLLRSMGLEGLEPNLLT 275

Query: 266 FNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMH 325
           +N++I+ LC+ G+I E +G+L  M ++G  PD  TYN+L++GYC VG    A  +   M 
Sbjct: 276 YNMVINGLCRVGRIEETSGVLAEMDRKGFAPDGVTYNTLVNGYCKVGNFHQALVLHSEML 335

Query: 326 SKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAG 385
             G    VV+Y  LIN  CK  N+  AM  + Q+   G+R   +TY +L++G  Q G   
Sbjct: 336 RNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRGLRPNGVTYTSLINGFSQKGFMD 395

Query: 386 YAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLI 445
            A +++DEM      P + TYN L++G C +  ++EA+ L   +E       +  ++ +I
Sbjct: 396 EAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYSTII 455

Query: 446 DGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCA 505
            G C+   LD A+++  ++ +KG+ P  +TYS +I GLC + +L +A D    M      
Sbjct: 456 AGFCRYQELDRAFQMNAEMVEKGVSPDAITYSSLIQGLCEQRRLNEACDLFQEMLNKSLL 515

Query: 506 PNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHEC 564
           P+  T+ +L++G+ +    ++ + L  +M   ++  +PD  T++++++ L K  +  E 
Sbjct: 516 PDEFTYTSLINGYCKEGDLNEALNLHDEMI--KKGFLPDTVTYNVLINGLNKQARTREA 572



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 147/556 (26%), Positives = 251/556 (45%), Gaps = 70/556 (12%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVI---SFYRKLVSIGLLPDFLTLNILINCFGNKERGLCV 129
           P + S+N +  ++ + R    VI     YR++++ G+  +  + NILI       RG C 
Sbjct: 165 PGVLSYNAILDSIVRCRK--PVIFAEKVYREMIASGVSLNVFSYNILI-------RGFCA 215

Query: 130 ENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLIS 189
              ++     F+ M      P+V+TY T+I  +C+   +  A +L + M     E     
Sbjct: 216 AGNLEMGLRFFEEMERNRCLPNVVTYNTVIGAYCKLKRIDEAFKLLRSMGLEGLE----- 270

Query: 190 KTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNG 249
             N+ +Y+++I+ LC+ G +++   +  EM  +G  P  V   TL++G+C  GN+ +   
Sbjct: 271 -PNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAPDGVTYNTLVNGYCKVGNFHQALV 329

Query: 250 LFIEMLDLGPRPNLLTFNVMIDCLCKGGKIN----------------------------- 280
           L  EML  G  P+++T+  +I+ +CK G +N                             
Sbjct: 330 LHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRGLRPNGVTYTSLINGFS 389

Query: 281 ------EANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVV 334
                 EA  + + MI+ G  P   TYN+L++G+C+ GR++ A  +   M  KG    VV
Sbjct: 390 QKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKGLSPDVV 449

Query: 335 SYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEM 394
           SY+ +I G+C+   ++ A  +  +++  GV    ITY++L+ GL +  +   A  LF EM
Sbjct: 450 SYSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDAITYSSLIQGLCEQRRLNEACDLFQEM 509

Query: 395 KLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRL 454
              ++ PD  TY  LI+G CK   + EA+ L   +    F      +N LI+GL K  R 
Sbjct: 510 LNKSLLPDEFTYTSLINGYCKEGDLNEALNLHDEMIKKGFLPDTVTYNVLINGLNKQART 569

Query: 455 DNAWELFHKLPQKGLVPTVVTYSIMIH---------------GLCRKGKLEKANDFLLYM 499
             A  L  KL     +P  +TY  +I                G C KG + +A+     M
Sbjct: 570 REAKRLLLKLFYDESIPNGITYDTLIESCSDIEFKSVVALIKGFCMKGLMNEADQVFESM 629

Query: 500 EKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDE 559
            K    PN   +N ++HG  ++    K  +L  +M   +   +P   T   +V  L  + 
Sbjct: 630 IKRNQKPNEAVYNVIIHGHCRDGNVHKAHKLYKEMV--DFGFIPHTVTIIALVKALYSEG 687

Query: 560 KYHECSAVSKSSYRAC 575
              + + V +   R+C
Sbjct: 688 MDEQLNLVIRDILRSC 703



 Score =  174 bits (442), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 121/408 (29%), Positives = 196/408 (48%), Gaps = 42/408 (10%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           C+ G I   E       M     +P   ++N L     K  ++   +  + +++  GL P
Sbjct: 284 CRVGRIE--ETSGVLAEMDRKGFAPDGVTYNTLVNGYCKVGNFHQALVLHSEMLRNGLPP 341

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           D +T   LIN        +C    +  A   F  M   G+RP+ +TY +LINGF + G +
Sbjct: 342 DVVTYTSLINT-------MCKAGNLNRAMEFFDQMHVRGLRPNGVTYTSLINGFSQKGFM 394

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
             A R+  +M+   +         I +Y+ +++  C  G +++A  L   M+G+G++P V
Sbjct: 395 DEAYRIWDEMIRSGF------PPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKGLSPDV 448

Query: 229 VVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLEL 288
           V  +T+I GFC     +    +  EM++ G  P+ +T++ +I  LC+  ++NEA  L + 
Sbjct: 449 VSYSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDAITYSSLIQGLCEQRRLNEACDLFQE 508

Query: 289 MIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILN 348
           M+ + L PD FTY SL++GYC  G ++ A  +   M  KG     V+YN+LING  K   
Sbjct: 509 MLNKSLLPDEFTYTSLINGYCKEGDLNEALNLHDEMIKKGFLPDTVTYNVLINGLNKQAR 568

Query: 349 VEEAMSL-----YRQIISNGVRQTVITYNTLLS---------------GLFQAGQAGYAQ 388
             EA  L     Y + I NG     ITY+TL+                G    G    A 
Sbjct: 569 TREAKRLLLKLFYDESIPNG-----ITYDTLIESCSDIEFKSVVALIKGFCMKGLMNEAD 623

Query: 389 KLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEF 436
           ++F+ M   N +P+ + YN++I G C++  V +A KL+   EM  F F
Sbjct: 624 QVFESMIKRNQKPNEAVYNVIIHGHCRDGNVHKAHKLYK--EMVDFGF 669



 Score =  161 bits (408), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 104/349 (29%), Positives = 175/349 (50%), Gaps = 30/349 (8%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CK+G  NLN A  FF  M      P   ++  L    ++    D     + +++  G  P
Sbjct: 354 CKAG--NLNRAMEFFDQMHVRGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPP 411

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
             +T N L+N       G CV  R++EA  L + M   G+ PDV++Y T+I GFCR   L
Sbjct: 412 TIVTYNALLN-------GHCVSGRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQEL 464

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
             A +++ +MV    E G+    +  +YS +I  LC++  +++A +LF EM  + + P  
Sbjct: 465 DRAFQMNAEMV----EKGV--SPDAITYSSLIQGLCEQRRLNEACDLFQEMLNKSLLPDE 518

Query: 229 VVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLEL 288
              T+LI+G+C  G+  E   L  EM+  G  P+ +T+NV+I+ L K  +  EA  LL  
Sbjct: 519 FTYTSLINGYCKEGDLNEALNLHDEMIKKGFLPDTVTYNVLINGLNKQARTREAKRLLLK 578

Query: 289 MIQRGLNPDRFTYNSLMD---------------GYCLVGRIDTAREIFLSMHSKGCKHTV 333
           +      P+  TY++L++               G+C+ G ++ A ++F SM  +  K   
Sbjct: 579 LFYDESIPNGITYDTLIESCSDIEFKSVVALIKGFCMKGLMNEADQVFESMIKRNQKPNE 638

Query: 334 VSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAG 382
             YN++I+G+C+  NV +A  LY++++  G     +T   L+  L+  G
Sbjct: 639 AVYNVIIHGHCRDGNVHKAHKLYKEMVDFGFIPHTVTIIALVKALYSEG 687



 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 68/232 (29%), Positives = 134/232 (57%), Gaps = 7/232 (3%)

Query: 329 CKHTVVSYNILINGYCKILN-VEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAG-Y 386
           C  +   +++++   C  LN +E+A+++      NG    V++YN +L  + +  +   +
Sbjct: 128 CNSSSAVFDLVVKS-CSYLNFIEKALNIVDLAKLNGFMPGVLSYNAILDSIVRCRKPVIF 186

Query: 387 AQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLID 446
           A+K++ EM    V  ++ +YNILI G C    ++  ++ F  +E N+    +  +N +I 
Sbjct: 187 AEKVYREMIASGVSLNVFSYNILIRGFCAAGNLEMGLRFFEEMERNRCLPNVVTYNTVIG 246

Query: 447 GLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAP 506
             CK  R+D A++L   +  +GL P ++TY+++I+GLCR G++E+ +  L  M++ G AP
Sbjct: 247 AYCKLKRIDEAFKLLRSMGLEGLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAP 306

Query: 507 NVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERN-LVPDDTTFSIVVDLLAK 557
           + VT+NTL++G+ +     + + +LH  +E  RN L PD  T++ +++ + K
Sbjct: 307 DGVTYNTLVNGYCKVGNFHQAL-VLH--SEMLRNGLPPDVVTYTSLINTMCK 355



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 66/256 (25%), Positives = 106/256 (41%), Gaps = 28/256 (10%)

Query: 56  LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNI 115
           LNEA   F  M +    P   ++  L     K    +  ++ + +++  G LPD +T N+
Sbjct: 499 LNEACDLFQEMLNKSLLPDEFTYTSLINGYCKEGDLNEALNLHDEMIKKGFLPDTVTYNV 558

Query: 116 LINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGT---------------LIN 160
           LIN       GL  + R +EA  L   +      P+ ITY T               LI 
Sbjct: 559 LIN-------GLNKQARTREAKRLLLKLFYDESIPNGITYDTLIESCSDIEFKSVVALIK 611

Query: 161 GFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMK 220
           GFC  G ++ A ++ + M+  +       K N   Y++II   C++G V KA +L+ EM 
Sbjct: 612 GFCMKGLMNEADQVFESMIKRN------QKPNEAVYNVIIHGHCRDGNVHKAHKLYKEMV 665

Query: 221 GRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKIN 280
             G  P  V    L+      G  E++N +  ++L      +      ++    K G I+
Sbjct: 666 DFGFIPHTVTIIALVKALYSEGMDEQLNLVIRDILRSCKLSDAELSKALVQINHKEGNID 725

Query: 281 EANGLLELMIQRGLNP 296
               LL  M + G  P
Sbjct: 726 AVFNLLTEMAKDGFLP 741


>gi|297806115|ref|XP_002870941.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297316778|gb|EFH47200.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 719

 Score =  224 bits (572), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 139/535 (25%), Positives = 258/535 (48%), Gaps = 52/535 (9%)

Query: 56  LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNI 115
           L EA   F  +     +  I + N L G++ +    +     Y+++   G+  +  TLNI
Sbjct: 171 LREAYEAFTLLRSKGYTVSIDACNALIGSLVRIGWVELAWRIYQEISRSGVGVNVYTLNI 230

Query: 116 LINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLH 175
           ++N        LC + ++++       +   GV PD++TY TLI+ +   G +  A  L 
Sbjct: 231 MVN-------ALCKDGKMEKVGTFLSEVQEKGVYPDIVTYNTLISAYSSQGLMEEAFELM 283

Query: 176 KKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLI 235
             M S  +  G      +++Y+ +I+ LCK G  ++AKE+F EM   G++P      +L+
Sbjct: 284 HAMPSKGFSPG------VYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLL 337

Query: 236 HGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLN 295
              C  G+  E   +F +M      P+L+ F+ M+    + G +++A      + + GL 
Sbjct: 338 MEACKKGDAVETENIFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLI 397

Query: 296 PDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYN------------------ 337
           PD   Y  L+ GYC  G I  A  +   M  +GC   VV+YN                  
Sbjct: 398 PDNVIYTILIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKL 457

Query: 338 -----------------ILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQ 380
                            ILI+G+CK+ N++ AM L++++    ++  V+TYNTLL G  +
Sbjct: 458 FNEMTERGLFPDSYTLTILIDGHCKLGNLQNAMELFKKMKEKRIKLDVVTYNTLLDGFGK 517

Query: 381 AGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEI 440
            G    A++++ +M    + P   +++IL++ LC    + EA +++  +     +  + I
Sbjct: 518 VGDIDTAKEIWADMVSKEILPTPISFSILVNALCSKGHLSEAFRVWDEMISKSIKPTVMI 577

Query: 441 FNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYME 500
            N +I G C++G   +      K+  +G VP  ++Y+ +I+G  ++  + KA   +  ME
Sbjct: 578 CNSMIKGYCRSGNASDGEIFLEKMISEGFVPDCISYNTLIYGFVKEENMSKAFGLVKKME 637

Query: 501 --KNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
             + G  P+V T+N+++HGF + N+  +   +L KM   ER + PD +T++ +++
Sbjct: 638 EKQGGLVPDVFTYNSILHGFCRENQMKEAEAVLRKMI--ERGVNPDRSTYTSLIN 690



 Score =  224 bits (572), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 140/470 (29%), Positives = 232/470 (49%), Gaps = 44/470 (9%)

Query: 135 EATW-LFKNMIAFGVRPDVITYGTLINGFCRTGNLS-VALRLHKKMVSGDYENGLISKTN 192
           E  W +++ +   GV  +V T   ++N  C+ G +  V   L +    G Y        +
Sbjct: 207 ELAWRIYQEISRSGVGVNVYTLNIMVNALCKDGKMEKVGTFLSEVQEKGVY-------PD 259

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
           I +Y+ +I +   +GL+++A EL   M  +G +P V    T+I+G C  G +E    +F 
Sbjct: 260 IVTYNTLISAYSSQGLMEEAFELMHAMPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFA 319

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
           EML  G  P+  T+  ++   CK G   E   +   M  R + PD   ++S+M  +   G
Sbjct: 320 EMLRSGLSPDSTTYRSLLMEACKKGDAVETENIFSDMRSRDVVPDLVCFSSMMSLFTRSG 379

Query: 313 RIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYN 372
            +D A   F S+   G     V Y ILI GYC+   + EAM+L  +++  G    V+TYN
Sbjct: 380 NLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYN 439

Query: 373 TLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMN 432
           T+L GL +    G A KLF+EM    + PD  T  ILIDG CK   +Q A++LF  ++  
Sbjct: 440 TILHGLCKRKMLGEADKLFNEMTERGLFPDSYTLTILIDGHCKLGNLQNAMELFKKMKEK 499

Query: 433 KFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKA 492
           + +  +  +N L+DG  K G +D A E++  +  K ++PT +++SI+++ LC KG L +A
Sbjct: 500 RIKLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISFSILVNALCSKGHLSEA 559

Query: 493 --------------------------------NDFLLYMEK---NGCAPNVVTFNTLMHG 517
                                           +D  +++EK    G  P+ +++NTL++G
Sbjct: 560 FRVWDEMISKSIKPTVMICNSMIKGYCRSGNASDGEIFLEKMISEGFVPDCISYNTLIYG 619

Query: 518 FLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAV 567
           F++    SK   L+ KM E +  LVPD  T++ ++    ++ +  E  AV
Sbjct: 620 FVKEENMSKAFGLVKKMEEKQGGLVPDVFTYNSILHGFCRENQMKEAEAV 669



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 142/507 (28%), Positives = 243/507 (47%), Gaps = 19/507 (3%)

Query: 41  LNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRK 100
           LN  ++  CK G   + +   F   +      P I ++N L  A +     +        
Sbjct: 228 LNIMVNALCKDG--KMEKVGTFLSEVQEKGVYPDIVTYNTLISAYSSQGLMEEAFELMHA 285

Query: 101 LVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLIN 160
           + S G  P   T N +IN       GLC   + + A  +F  M+  G+ PD  TY +L+ 
Sbjct: 286 MPSKGFSPGVYTYNTVIN-------GLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLM 338

Query: 161 GFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMK 220
             C+ G+      +   M S D    L+       +S ++    + G +DKA   F  +K
Sbjct: 339 EACKKGDAVETENIFSDMRSRDVVPDLVC------FSSMMSLFTRSGNLDKALMYFNSVK 392

Query: 221 GRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKIN 280
             G+ P  V+ T LI G+C  G   E   L  EML  G   +++T+N ++  LCK   + 
Sbjct: 393 EAGLIPDNVIYTILIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLG 452

Query: 281 EANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILI 340
           EA+ L   M +RGL PD +T   L+DG+C +G +  A E+F  M  K  K  VV+YN L+
Sbjct: 453 EADKLFNEMTERGLFPDSYTLTILIDGHCKLGNLQNAMELFKKMKEKRIKLDVVTYNTLL 512

Query: 341 NGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVE 400
           +G+ K+ +++ A  ++  ++S  +  T I+++ L++ L   G    A +++DEM   +++
Sbjct: 513 DGFGKVGDIDTAKEIWADMVSKEILPTPISFSILVNALCSKGHLSEAFRVWDEMISKSIK 572

Query: 401 PDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWEL 460
           P +   N +I G C++    +       +    F      +N LI G  K   +  A+ L
Sbjct: 573 PTVMICNSMIKGYCRSGNASDGEIFLEKMISEGFVPDCISYNTLIYGFVKEENMSKAFGL 632

Query: 461 FHKLPQK--GLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGF 518
             K+ +K  GLVP V TY+ ++HG CR+ ++++A   L  M + G  P+  T+ +L++GF
Sbjct: 633 VKKMEEKQGGLVPDVFTYNSILHGFCRENQMKEAEAVLRKMIERGVNPDRSTYTSLINGF 692

Query: 519 LQNNKTSKVVELLHKMAEPERNLVPDD 545
           +  +  ++      +M   +R   PDD
Sbjct: 693 VSQDNLTEAFRFHDEML--QRGFSPDD 717



 Score =  169 bits (427), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 120/449 (26%), Positives = 209/449 (46%), Gaps = 48/449 (10%)

Query: 153 ITYGTLINGFCRTGNLSVA----LRLHKKMVSGDYE--NGLISK-----TNIFSYSIIID 201
           ++   +I+   R+G LS A    LR+ ++      E  N L+S      +N   + ++I 
Sbjct: 104 LSLSAMIHILVRSGRLSDAQSCVLRMIRRSGVSRVEIVNSLVSTYSNCGSNDSVFDLLIR 163

Query: 202 SLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRP 261
           +  +   + +A E F  ++ +G   ++  C  LI      G  E    ++ E+   G   
Sbjct: 164 TFVQARKLREAYEAFTLLRSKGYTVSIDACNALIGSLVRIGWVELAWRIYQEISRSGVGV 223

Query: 262 NLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIF 321
           N+ T N+M++ LCK GK+ +    L  + ++G+ PD  TYN+L+  Y   G ++ A E+ 
Sbjct: 224 NVYTLNIMVNALCKDGKMEKVGTFLSEVQEKGVYPDIVTYNTLISAYSSQGLMEEAFELM 283

Query: 322 LSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQA 381
            +M SKG    V +YN +ING CK    E A  ++ +++ +G+     TY +LL    + 
Sbjct: 284 HAMPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKK 343

Query: 382 GQAGYAQKLFDEMKLYNVEPDLS-----------------------------------TY 406
           G A   + +F +M+  +V PDL                                     Y
Sbjct: 344 GDAVETENIFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIY 403

Query: 407 NILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQ 466
            ILI G C+   + EA+ L + +        +  +N ++ GLCK   L  A +LF+++ +
Sbjct: 404 TILIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTE 463

Query: 467 KGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSK 526
           +GL P   T +I+I G C+ G L+ A +    M++     +VVT+NTL+ GF +      
Sbjct: 464 RGLFPDSYTLTILIDGHCKLGNLQNAMELFKKMKEKRIKLDVVTYNTLLDGFGKVGDIDT 523

Query: 527 VVELLHKMAEPERNLVPDDTTFSIVVDLL 555
             E+   M   E  ++P   +FSI+V+ L
Sbjct: 524 AKEIWADMVSKE--ILPTPISFSILVNAL 550



 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 103/381 (27%), Positives = 178/381 (46%), Gaps = 19/381 (4%)

Query: 190 KTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNG 249
           K    S S +I  L + G +  A+   L M  R     V +  +L+  +   G+ + V  
Sbjct: 100 KHTSLSLSAMIHILVRSGRLSDAQSCVLRMIRRSGVSRVEIVNSLVSTYSNCGSNDSVFD 159

Query: 250 L----FIEMLDLGPRPNLLTF-------------NVMIDCLCKGGKINEANGLLELMIQR 292
           L    F++   L       T              N +I  L + G +  A  + + + + 
Sbjct: 160 LLIRTFVQARKLREAYEAFTLLRSKGYTVSIDACNALIGSLVRIGWVELAWRIYQEISRS 219

Query: 293 GLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEA 352
           G+  + +T N +++  C  G+++        +  KG    +V+YN LI+ Y     +EEA
Sbjct: 220 GVGVNVYTLNIMVNALCKDGKMEKVGTFLSEVQEKGVYPDIVTYNTLISAYSSQGLMEEA 279

Query: 353 MSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDG 412
             L   + S G    V TYNT+++GL + G+   A+++F EM    + PD +TY  L+  
Sbjct: 280 FELMHAMPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLME 339

Query: 413 LCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPT 472
            CK     E   +F  +        +  F+ ++    ++G LD A   F+ + + GL+P 
Sbjct: 340 ACKKGDAVETENIFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPD 399

Query: 473 VVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLH 532
            V Y+I+I G CRKG + +A +    M + GCA +VVT+NT++HG  +     +  +L +
Sbjct: 400 NVIYTILIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFN 459

Query: 533 KMAEPERNLVPDDTTFSIVVD 553
           +M   ER L PD  T +I++D
Sbjct: 460 EMT--ERGLFPDSYTLTILID 478



 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 52/167 (31%), Positives = 77/167 (46%), Gaps = 13/167 (7%)

Query: 17  SKVKLSSLFKSPRQIAAVSSPETQL--NEFLHENCKSGIINLNEARYFFGYMTHMQPSPP 74
           SK  LS  F+   ++ + S   T +  N  +   C+SG  N ++   F   M      P 
Sbjct: 552 SKGHLSEAFRVWDEMISKSIKPTVMICNSMIKGYCRSG--NASDGEIFLEKMISEGFVPD 609

Query: 75  ISSFNLLFGAVAKNRHYDAVISFYRKLVSI--GLLPDFLTLNILINCFGNKERGLCVENR 132
             S+N L     K  +        +K+     GL+PD  T N +++       G C EN+
Sbjct: 610 CISYNTLIYGFVKEENMSKAFGLVKKMEEKQGGLVPDVFTYNSILH-------GFCRENQ 662

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMV 179
           +KEA  + + MI  GV PD  TY +LINGF    NL+ A R H +M+
Sbjct: 663 MKEAEAVLRKMIERGVNPDRSTYTSLINGFVSQDNLTEAFRFHDEML 709


>gi|357141282|ref|XP_003572167.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
           mitochondrial-like [Brachypodium distachyon]
          Length = 686

 Score =  224 bits (572), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 138/507 (27%), Positives = 255/507 (50%), Gaps = 16/507 (3%)

Query: 58  EARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGL-LPDFLTLNIL 116
           + R  F  +   +  P   ++N    A       D  +   R++   G   P+  + N++
Sbjct: 135 DVRGAFELLVAARARPDTFTWNKAVQACVVAGDLDEAVGMLRRMGCDGAPAPNAFSYNVV 194

Query: 117 INCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHK 176
           I        GL       +A  LF  M    V P+ ITY T+I+G  + G+L    RL  
Sbjct: 195 I-------AGLWKAGTDCDAVKLFDEMPEKAVVPNHITYNTMIDGHIKKGDLESGFRLWS 247

Query: 177 KMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIH 236
           +M+     +GL  K N+ +Y++++  LC+ G + +   +  EM  R + P     + L  
Sbjct: 248 QML----RHGL--KPNVITYNVLLSGLCRAGRMGETAAVLDEMASRKMVPDGFTYSILFD 301

Query: 237 GFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNP 296
           G    G+ + +  LF E +  G +    T +++++ LCK GKI++A  +L+ ++  GL  
Sbjct: 302 GHSRTGDSQTMLSLFEESVKKGVKIGAYTCSILLNGLCKDGKISKAEEVLQTLVNSGLLQ 361

Query: 297 DRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLY 356
               YN+L++GYC +G ++ A  IF  M S+  +   ++YN LING  K+  + EA  L 
Sbjct: 362 TTVIYNTLINGYCQIGDLEGAFSIFQQMKSRLIRPDHITYNALINGLGKVERITEAHDLV 421

Query: 357 RQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKN 416
            ++  NGV  +V T+NTL+    +AGQ      +  +M+   ++P++ +Y  +++  CKN
Sbjct: 422 IEMEKNGVNPSVETFNTLIDAYGRAGQLEKCFIILSDMQEKGLKPNVVSYGSIVNAFCKN 481

Query: 417 NCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTY 476
             + EAV +   + +     G +++N +ID   + G  D A+ L  K+   G+ P++VTY
Sbjct: 482 GKILEAVAILDDMFIKDVLPGAQVYNAIIDAYIECGSTDQAFMLAEKMKSSGVPPSIVTY 541

Query: 477 SIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAE 536
           +++I GLC++ ++ +A + L  +   G AP+V+++NTL+      + T + +EL  +M +
Sbjct: 542 NLLIKGLCKQSQISEAEELLDSLRNYGLAPDVISYNTLISACCYRSNTDRALELEKEMWK 601

Query: 537 PERNLVPDDTTFSIVVDLLAKDEKYHE 563
               + P   T+ ++   L    + HE
Sbjct: 602 C--GIKPSPRTYRMLFSSLGGAGRVHE 626



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 132/479 (27%), Positives = 230/479 (48%), Gaps = 13/479 (2%)

Query: 58  EARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILI 117
           +A   F  M      P   ++N +     K    ++    + +++  GL P+ +T N+L+
Sbjct: 206 DAVKLFDEMPEKAVVPNHITYNTMIDGHIKKGDLESGFRLWSQMLRHGLKPNVITYNVLL 265

Query: 118 NCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKK 177
           +       GLC   R+ E   +   M +  + PD  TY  L +G  RTG+    L L ++
Sbjct: 266 S-------GLCRAGRMGETAAVLDEMASRKMVPDGFTYSILFDGHSRTGDSQTMLSLFEE 318

Query: 178 MVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHG 237
            V    + G+  K   ++ SI+++ LCK+G + KA+E+   +   G+    V+  TLI+G
Sbjct: 319 SV----KKGV--KIGAYTCSILLNGLCKDGKISKAEEVLQTLVNSGLLQTTVIYNTLING 372

Query: 238 FCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPD 297
           +C  G+ E    +F +M     RP+ +T+N +I+ L K  +I EA+ L+  M + G+NP 
Sbjct: 373 YCQIGDLEGAFSIFQQMKSRLIRPDHITYNALINGLGKVERITEAHDLVIEMEKNGVNPS 432

Query: 298 RFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYR 357
             T+N+L+D Y   G+++    I   M  KG K  VVSY  ++N +CK   + EA+++  
Sbjct: 433 VETFNTLIDAYGRAGQLEKCFIILSDMQEKGLKPNVVSYGSIVNAFCKNGKILEAVAILD 492

Query: 358 QIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNN 417
            +    V      YN ++    + G    A  L ++MK   V P + TYN+LI GLCK +
Sbjct: 493 DMFIKDVLPGAQVYNAIIDAYIECGSTDQAFMLAEKMKSSGVPPSIVTYNLLIKGLCKQS 552

Query: 418 CVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYS 477
            + EA +L   L        +  +N LI   C     D A EL  ++ + G+ P+  TY 
Sbjct: 553 QISEAEELLDSLRNYGLAPDVISYNTLISACCYRSNTDRALELEKEMWKCGIKPSPRTYR 612

Query: 478 IMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAE 536
           ++   L   G++ +  +    M      P    +N ++  + +  + SKV  L  +M++
Sbjct: 613 MLFSSLGGAGRVHEMENLYQQMLDKDVVPCSGIYNIMVDAYAKCGEESKVEALRKEMSD 671



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 131/544 (24%), Positives = 255/544 (46%), Gaps = 25/544 (4%)

Query: 31  IAAVSSPET-QLNEFLHENCKSGIINLNEARYFFGYMTHM----QPSPPISSFNLLFGAV 85
           +AA + P+T   N+ +     +G  +L+EA    G +  M     P+P   S+N++   +
Sbjct: 144 VAARARPDTFTWNKAVQACVVAG--DLDEA---VGMLRRMGCDGAPAPNAFSYNVVIAGL 198

Query: 86  AKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIA 145
            K       +  + ++    ++P+ +T N +I+  G+ ++G      ++    L+  M+ 
Sbjct: 199 WKAGTDCDAVKLFDEMPEKAVVPNHITYNTMID--GHIKKG-----DLESGFRLWSQMLR 251

Query: 146 FGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCK 205
            G++P+VITY  L++G CR G +     +  +M S           + F+YSI+ D   +
Sbjct: 252 HGLKPNVITYNVLLSGLCRAGRMGETAAVLDEMASRKM------VPDGFTYSILFDGHSR 305

Query: 206 EGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLT 265
            G       LF E   +G+      C+ L++G C  G   +   +   +++ G     + 
Sbjct: 306 TGDSQTMLSLFEESVKKGVKIGAYTCSILLNGLCKDGKISKAEEVLQTLVNSGLLQTTVI 365

Query: 266 FNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMH 325
           +N +I+  C+ G +  A  + + M  R + PD  TYN+L++G   V RI  A ++ + M 
Sbjct: 366 YNTLINGYCQIGDLEGAFSIFQQMKSRLIRPDHITYNALINGLGKVERITEAHDLVIEME 425

Query: 326 SKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAG 385
             G   +V ++N LI+ Y +   +E+   +   +   G++  V++Y ++++   + G+  
Sbjct: 426 KNGVNPSVETFNTLIDAYGRAGQLEKCFIILSDMQEKGLKPNVVSYGSIVNAFCKNGKIL 485

Query: 386 YAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLI 445
            A  + D+M + +V P    YN +ID   +     +A  L   ++ +     I  +N LI
Sbjct: 486 EAVAILDDMFIKDVLPGAQVYNAIIDAYIECGSTDQAFMLAEKMKSSGVPPSIVTYNLLI 545

Query: 446 DGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCA 505
            GLCK  ++  A EL   L   GL P V++Y+ +I   C +   ++A +    M K G  
Sbjct: 546 KGLCKQSQISEAEELLDSLRNYGLAPDVISYNTLISACCYRSNTDRALELEKEMWKCGIK 605

Query: 506 PNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECS 565
           P+  T+  L        +  ++  L  +M   ++++VP    ++I+VD  AK  +  +  
Sbjct: 606 PSPRTYRMLFSSLGGAGRVHEMENLYQQML--DKDVVPCSGIYNIMVDAYAKCGEESKVE 663

Query: 566 AVSK 569
           A+ K
Sbjct: 664 ALRK 667



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 94/362 (25%), Positives = 163/362 (45%), Gaps = 73/362 (20%)

Query: 277 GKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRID--------------------- 315
           G+  +  G  EL++     PD FT+N  +    + G +D                     
Sbjct: 131 GRHADVRGAFELLVAARARPDTFTWNKAVQACVVAGDLDEAVGMLRRMGCDGAPAPNAFS 190

Query: 316 ---------------TAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQII 360
                           A ++F  M  K      ++YN +I+G+ K  ++E    L+ Q++
Sbjct: 191 YNVVIAGLWKAGTDCDAVKLFDEMPEKAVVPNHITYNTMIDGHIKKGDLESGFRLWSQML 250

Query: 361 SNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILID--------- 411
            +G++  VITYN LLSGL +AG+ G    + DEM    + PD  TY+IL D         
Sbjct: 251 RHGLKPNVITYNVLLSGLCRAGRMGETAAVLDEMASRKMVPDGFTYSILFDGHSRTGDSQ 310

Query: 412 --------------------------GLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLI 445
                                     GLCK+  + +A ++   L  +       I+N LI
Sbjct: 311 TMLSLFEESVKKGVKIGAYTCSILLNGLCKDGKISKAEEVLQTLVNSGLLQTTVIYNTLI 370

Query: 446 DGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCA 505
           +G C+ G L+ A+ +F ++  + + P  +TY+ +I+GL +  ++ +A+D ++ MEKNG  
Sbjct: 371 NGYCQIGDLEGAFSIFQQMKSRLIRPDHITYNALINGLGKVERITEAHDLVIEMEKNGVN 430

Query: 506 PNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECS 565
           P+V TFNTL+  + +  +  K   +L  M   E+ L P+  ++  +V+   K+ K  E  
Sbjct: 431 PSVETFNTLIDAYGRAGQLEKCFIILSDMQ--EKGLKPNVVSYGSIVNAFCKNGKILEAV 488

Query: 566 AV 567
           A+
Sbjct: 489 AI 490



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 85/322 (26%), Positives = 140/322 (43%), Gaps = 48/322 (14%)

Query: 78  FNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEAT 137
           +N L     +    +   S ++++ S  + PD +T N LIN  G  ER       I EA 
Sbjct: 366 YNTLINGYCQIGDLEGAFSIFQQMKSRLIRPDHITYNALINGLGKVER-------ITEAH 418

Query: 138 WLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYS 197
            L   M   GV P V T+ TLI+ + R G L     +   M     E GL  K N+ SY 
Sbjct: 419 DLVIEMEKNGVNPSVETFNTLIDAYGRAGQLEKCFIILSDM----QEKGL--KPNVVSYG 472

Query: 198 IIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDL 257
            I+++ CK G + +A  +  +M  + + P   V   +I  +   G+ ++   L  +M   
Sbjct: 473 SIVNAFCKNGKILEAVAILDDMFIKDVLPGAQVYNAIIDAYIECGSTDQAFMLAEKMKSS 532

Query: 258 GPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTA 317
           G  P+++T+N++I  LCK  +I+EA  LL+ +   GL PD  +YN+L+   C     D A
Sbjct: 533 GVPPSIVTYNLLIKGLCKQSQISEAEELLDSLRNYGLAPDVISYNTLISACCYRSNTDRA 592

Query: 318 -------------------REIFLSMHSKGCKHTVVS----------------YNILING 342
                              R +F S+   G  H + +                YNI+++ 
Sbjct: 593 LELEKEMWKCGIKPSPRTYRMLFSSLGGAGRVHEMENLYQQMLDKDVVPCSGIYNIMVDA 652

Query: 343 YCKILNVEEAMSLYRQIISNGV 364
           Y K     +  +L +++   G+
Sbjct: 653 YAKCGEESKVEALRKEMSDKGI 674



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 59/265 (22%), Positives = 104/265 (39%), Gaps = 50/265 (18%)

Query: 72  SPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVEN 131
           +P + +FN L  A  +    +        +   GL P+ ++   ++N F       C   
Sbjct: 430 NPSVETFNTLIDAYGRAGQLEKCFIILSDMQEKGLKPNVVSYGSIVNAF-------CKNG 482

Query: 132 RIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKT 191
           +I EA  +  +M    V P    Y  +I+ +   G+   A  L +KM S           
Sbjct: 483 KILEAVAILDDMFIKDVLPGAQVYNAIIDAYIECGSTDQAFMLAEKMKSSGV------PP 536

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCC----------- 240
           +I +Y+++I  LCK+  + +A+EL   ++  G+ P V+   TLI   CC           
Sbjct: 537 SIVTYNLLIKGLCKQSQISEAEELLDSLRNYGLAPDVISYNTLISA-CCYRSNTDRALEL 595

Query: 241 -------------------------AGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCK 275
                                    AG   E+  L+ +MLD    P    +N+M+D   K
Sbjct: 596 EKEMWKCGIKPSPRTYRMLFSSLGGAGRVHEMENLYQQMLDKDVVPCSGIYNIMVDAYAK 655

Query: 276 GGKINEANGLLELMIQRGLNPDRFT 300
            G+ ++   L + M  +G+    +T
Sbjct: 656 CGEESKVEALRKEMSDKGIAVGDYT 680


>gi|359486541|ref|XP_002275423.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Vitis vinifera]
          Length = 778

 Score =  224 bits (572), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 147/493 (29%), Positives = 249/493 (50%), Gaps = 17/493 (3%)

Query: 73  PPISSFNL-LFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVEN 131
           P +++FN+ ++G   +N+  DAV  F   +      PD +T N +++        LC + 
Sbjct: 206 PNVNTFNIVIYGYCLENKFKDAV-EFLNVMGKYNCSPDNVTYNTILDT-------LCKKG 257

Query: 132 RIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKT 191
           R+ +A  L  +M + G+ P+  TY  L+ G+C+ G L  A  + + M     +N L+   
Sbjct: 258 RLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMT----QNNLLP-- 311

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
           ++++Y+++I+ LC EG +++A +L  EM+   + P VV   TLI+G        E   L 
Sbjct: 312 DVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLL 371

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
            EM + G +PN +T N+M+   CK GK+++A+  +  M + G +PD  TYN+L++GYC  
Sbjct: 372 EEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKA 431

Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
           G +  A      M  K  K   V+ N ++   C+   +EEA  L       G     ++Y
Sbjct: 432 GNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSY 491

Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
            TL+ G F+ G    A KL+DEMK   + P   TYN +I GLC+    ++A+   + L  
Sbjct: 492 GTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLE 551

Query: 432 NKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEK 491
           +        +N ++ G C+ G ++ A++  +K+ +    P V T +I++ GLC +G LEK
Sbjct: 552 SGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGVLEK 611

Query: 492 ANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIV 551
           A          G A + VT+NTL+    +  +      LL +M E E  L PD  T++ +
Sbjct: 612 ALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKE--LGPDHYTYNAI 669

Query: 552 VDLLAKDEKYHEC 564
           +  L    +  E 
Sbjct: 670 ITALTDSGRIREA 682



 Score =  221 bits (564), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 150/468 (32%), Positives = 233/468 (49%), Gaps = 15/468 (3%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
           N  L   CK G   L +AR     M      P  +++N+L     K        +    +
Sbjct: 247 NTILDTLCKKG--RLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELM 304

Query: 102 VSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLING 161
               LLPD  T N+LIN       GLC E RI+EA  L   M    + PDV++Y TLING
Sbjct: 305 TQNNLLPDVWTYNMLIN-------GLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLING 357

Query: 162 FCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKG 221
                 +S A +L ++M     E G+  K N  +++I++   CKEG +D A     +M+ 
Sbjct: 358 CLEWSKISEAFKLLEEMS----EKGV--KPNAVTHNIMVKWYCKEGKMDDASNTITKMEE 411

Query: 222 RGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINE 281
            G +P  V   TLI+G+C AGN  E      EM     + + +T N ++  LC+  K+ E
Sbjct: 412 SGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEE 471

Query: 282 ANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILIN 341
           A  LL    +RG   D  +Y +L+ GY   G +D A +++  M  K    + V+YN +I 
Sbjct: 472 AYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIG 531

Query: 342 GYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEP 401
           G C+    E+A+S   +++ +G+     TYNT+L G  + G    A +  ++M   + +P
Sbjct: 532 GLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKP 591

Query: 402 DLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELF 461
           D+ T NIL+ GLC    +++A+KLF+             +N LI  LCK GRLD+A+ L 
Sbjct: 592 DVFTCNILLRGLCMEGVLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLL 651

Query: 462 HKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVV 509
            ++ +K L P   TY+ +I  L   G++ +A +F+  M + G  P+ V
Sbjct: 652 SEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGNLPDQV 699



 Score =  219 bits (557), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 143/481 (29%), Positives = 246/481 (51%), Gaps = 12/481 (2%)

Query: 72  SPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVEN 131
           SP  +  +   GA  ++         ++K+  + L P+ LT N L+N          V  
Sbjct: 132 SPSKALLDTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSVSF 191

Query: 132 RIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKT 191
             +EA   F + I  G+ P+V T+  +I G+C       A+     M  G Y     S  
Sbjct: 192 S-REA---FNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVM--GKYN---CSPD 242

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
           N+ +Y+ I+D+LCK+G +  A++L ++MK RG+ P       L++G+C  G  +E   + 
Sbjct: 243 NV-TYNTILDTLCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVI 301

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
             M      P++ T+N++I+ LC  G+I EA  L + M    L PD  +YN+L++G    
Sbjct: 302 ELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEW 361

Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
            +I  A ++   M  KG K   V++NI++  YCK   +++A +   ++  +G     +TY
Sbjct: 362 SKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTY 421

Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
           NTL++G  +AG  G A +  DEM   N++ D  T N ++  LC+   ++EA KL      
Sbjct: 422 NTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARK 481

Query: 432 NKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEK 491
             +      +  LI G  K G +D A +L+ ++ +K ++P+ VTY+ +I GLC+ GK E+
Sbjct: 482 RGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQ 541

Query: 492 ANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIV 551
           A   L  + ++G  P+  T+NT++HG+ +     K  +  +KM   E +  PD  T +I+
Sbjct: 542 AISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMV--ENSFKPDVFTCNIL 599

Query: 552 V 552
           +
Sbjct: 600 L 600



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 148/506 (29%), Positives = 247/506 (48%), Gaps = 20/506 (3%)

Query: 57  NEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL----VSIGLLPDFLT 112
           + A   F  M  ++  P + + N L  ++ +     +V SF R+     + +G++P+  T
Sbjct: 152 HHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSV-SFSREAFNDAIKLGIVPNVNT 210

Query: 113 LNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVAL 172
            NI+I        G C+EN+ K+A      M  +   PD +TY T+++  C+ G L  A 
Sbjct: 211 FNIVI-------YGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDTLCKKGRLGDAR 263

Query: 173 RLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCT 232
            L   M S     GL+   N  +Y+I++   CK G + +A  +   M    + P V    
Sbjct: 264 DLLMDMKS----RGLLPNRN--TYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYN 317

Query: 233 TLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQR 292
            LI+G C  G  EE   L  EM +L   P+++++N +I+   +  KI+EA  LLE M ++
Sbjct: 318 MLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEK 377

Query: 293 GLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEA 352
           G+ P+  T+N ++  YC  G++D A      M   G     V+YN LINGYCK  N+ EA
Sbjct: 378 GVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEA 437

Query: 353 MSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDG 412
                ++    ++   +T NT+L  L +  +   A KL    +      D  +Y  LI G
Sbjct: 438 FRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVG 497

Query: 413 LCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPT 472
             K+  V  A+KL+  ++  +       +NC+I GLC+ G+ + A    ++L + GL+P 
Sbjct: 498 YFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPD 557

Query: 473 VVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLH 532
             TY+ ++HG CR+G +EKA  F   M +N   P+V T N L+ G        K ++L +
Sbjct: 558 ETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGVLEKALKLFN 617

Query: 533 KMAEPERNLVPDDTTFSIVVDLLAKD 558
                 + +  D  T++ ++  L K+
Sbjct: 618 TWVSKGKAI--DTVTYNTLITSLCKE 641



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 81/283 (28%), Positives = 140/283 (49%), Gaps = 5/283 (1%)

Query: 286 LELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILING--- 342
           L L I R  +P +   ++ +  Y   G+   A +IF  M     +  +++ N L+N    
Sbjct: 123 LHLSILRLTSPSKALLDTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVR 182

Query: 343 YCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPD 402
           Y    +V  +   +   I  G+   V T+N ++ G     +   A +  + M  YN  PD
Sbjct: 183 YPSSHSVSFSREAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPD 242

Query: 403 LSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFH 462
             TYN ++D LCK   + +A  L   ++          +N L+ G CK G L  A  +  
Sbjct: 243 NVTYNTILDTLCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIE 302

Query: 463 KLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNN 522
            + Q  L+P V TY+++I+GLC +G++E+A      ME     P+VV++NTL++G L+ +
Sbjct: 303 LMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWS 362

Query: 523 KTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECS 565
           K S+  +LL +M+  E+ + P+  T +I+V    K+ K  + S
Sbjct: 363 KISEAFKLLEEMS--EKGVKPNAVTHNIMVKWYCKEGKMDDAS 403


>gi|357137687|ref|XP_003570431.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
           mitochondrial-like [Brachypodium distachyon]
          Length = 938

 Score =  224 bits (572), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 151/497 (30%), Positives = 250/497 (50%), Gaps = 50/497 (10%)

Query: 126 GLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYEN 185
           G C    ++ A  + + M A GV  DV+ Y +L+ G CR G +  A    + MV     +
Sbjct: 183 GYCKVGDMETAFAVAERMKAQGVGVDVVGYNSLVAGLCRAGEVDAA----RDMVDTMKRD 238

Query: 186 GLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWE 245
           G+  + N+ +Y++ I   C+   VD A  L+ EM  +G+ P VV  + L+ G C  G + 
Sbjct: 239 GV--EPNVVTYTMFIVEYCRRNAVDDAFSLYEEMVRKGVLPDVVTLSALVGGLCKDGRFS 296

Query: 246 EVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLM 305
           E   LF EM  +G  PN +T+ ++ID L K  + NE+  LL  ++ RG+  D   Y +LM
Sbjct: 297 EAYALFREMEKIGAAPNHVTYCMLIDTLAKAQRGNESLSLLGEVVSRGVVMDLIMYTALM 356

Query: 306 DGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVR 365
           D  C  G+ID A+++F    S       V+Y +LI+  CK  NV+ A  +  ++    + 
Sbjct: 357 DWLCKEGKIDEAKDMFRHALSDNHTPNGVTYTVLIDALCKAGNVDGAEQVLSEMEEKSIS 416

Query: 366 QTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKL 425
             V+T++++++GL + G  G A     EMK   ++P++ TY  +IDG  K    + A+ +
Sbjct: 417 PNVVTFSSIINGLVKRGWVGKATDYMREMKERGIDPNVVTYGTVIDGSFKCLGQEAALDV 476

Query: 426 FHML-----EMNKF--------------------------EFGIEI----FNCLIDGLCK 450
           +H +     E+NKF                          E G+ +    +  LIDGL K
Sbjct: 477 YHEMLCEGVEVNKFIVDSLVNGLKKNGKIEKAEALFREMNERGVLLDHVNYTTLIDGLFK 536

Query: 451 AGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVT 510
            G L  A+++  +L +K L+P  V Y++ I+ LC  GK ++A  FL  M+  G  P+ VT
Sbjct: 537 TGNLPAAFKVGQELTEKNLLPDAVVYNVFINCLCMLGKSKEAESFLEEMQSTGLKPDQVT 596

Query: 511 FNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKS 570
           +NT++    +  KT+K ++LL+ M     ++ P+  T+S ++  L       E  AV K+
Sbjct: 597 YNTMIAAQSREGKTAKALKLLNGMKRS--SIKPNLITYSTLIVGL------FEAGAVEKA 648

Query: 571 SYRAC-LYVTIFQPSSL 586
            Y    +  + F P+SL
Sbjct: 649 KYLLNEMSSSGFSPTSL 665



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 154/573 (26%), Positives = 266/573 (46%), Gaps = 75/573 (13%)

Query: 44  FLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVS 103
           F+ E C+   ++  +A   +  M      P + + + L G + K+  +    + +R++  
Sbjct: 250 FIVEYCRRNAVD--DAFSLYEEMVRKGVLPDVVTLSALVGGLCKDGRFSEAYALFREMEK 307

Query: 104 IGLLPDFLTLNILINCFGNKERG----------------------------LCVENRIKE 135
           IG  P+ +T  +LI+     +RG                            LC E +I E
Sbjct: 308 IGAAPNHVTYCMLIDTLAKAQRGNESLSLLGEVVSRGVVMDLIMYTALMDWLCKEGKIDE 367

Query: 136 ATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFS 195
           A  +F++ ++    P+ +TY  LI+  C+ GN+  A ++  +M     E   IS  N+ +
Sbjct: 368 AKDMFRHALSDNHTPNGVTYTVLIDALCKAGNVDGAEQVLSEM-----EEKSISP-NVVT 421

Query: 196 YSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHG-FCCAGNWEEVNGLFIEM 254
           +S II+ L K G V KA +   EMK RGI+P VV   T+I G F C G  E    ++ EM
Sbjct: 422 FSSIINGLVKRGWVGKATDYMREMKERGIDPNVVTYGTVIDGSFKCLGQ-EAALDVYHEM 480

Query: 255 LDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRI 314
           L  G   N    + +++ L K GKI +A  L   M +RG+  D   Y +L+DG    G +
Sbjct: 481 LCEGVEVNKFIVDSLVNGLKKNGKIEKAEALFREMNERGVLLDHVNYTTLIDGLFKTGNL 540

Query: 315 DTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTL 374
             A ++   +  K      V YN+ IN  C +   +EA S   ++ S G++   +TYNT+
Sbjct: 541 PAAFKVGQELTEKNLLPDAVVYNVFINCLCMLGKSKEAESFLEEMQSTGLKPDQVTYNTM 600

Query: 375 LSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFH------- 427
           ++   + G+   A KL + MK  +++P+L TY+ LI GL +   V++A  L +       
Sbjct: 601 IAAQSREGKTAKALKLLNGMKRSSIKPNLITYSTLIVGLFEAGAVEKAKYLLNEMSSSGF 660

Query: 428 ----------------------MLEMNKFEFG------IEIFNCLIDGLCKAGRLDNAWE 459
                                 +LE++++         I ++N L+  LC  G    A  
Sbjct: 661 SPTSLTHRRVLQACSQGRRSDLILEIHEWMMNAGLCADITVYNTLVRVLCYNGMTRKAMV 720

Query: 460 LFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFL 519
           +  ++  +G+ P  +T++ +I G  + G L+ A      M  +G +PNV TFNTL+ G  
Sbjct: 721 VLEEMSGRGIAPDTITFNALILGHFKSGHLDNAFSTYDQMLYHGISPNVATFNTLLGGLE 780

Query: 520 QNNKTSKVVELLHKMAEPERNLVPDDTTFSIVV 552
              +  +   +L++M   +R + P + T+ I+V
Sbjct: 781 SAGRIGESDMVLNEM--KKRGIEPSNLTYDILV 811



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 129/461 (27%), Positives = 222/461 (48%), Gaps = 13/461 (2%)

Query: 75  ISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIK 134
           +  +N L   + +    DA       +   G+ P+ +T  + I  +       C  N + 
Sbjct: 209 VVGYNSLVAGLCRAGEVDAARDMVDTMKRDGVEPNVVTYTMFIVEY-------CRRNAVD 261

Query: 135 EATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIF 194
           +A  L++ M+  GV PDV+T   L+ G C+ G  S A  L ++M        + +  N  
Sbjct: 262 DAFSLYEEMVRKGVLPDVVTLSALVGGLCKDGRFSEAYALFREM------EKIGAAPNHV 315

Query: 195 SYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEM 254
           +Y ++ID+L K    +++  L  E+  RG+   +++ T L+   C  G  +E   +F   
Sbjct: 316 TYCMLIDTLAKAQRGNESLSLLGEVVSRGVVMDLIMYTALMDWLCKEGKIDEAKDMFRHA 375

Query: 255 LDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRI 314
           L     PN +T+ V+ID LCK G ++ A  +L  M ++ ++P+  T++S+++G    G +
Sbjct: 376 LSDNHTPNGVTYTVLIDALCKAGNVDGAEQVLSEMEEKSISPNVVTFSSIINGLVKRGWV 435

Query: 315 DTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTL 374
             A +    M  +G    VV+Y  +I+G  K L  E A+ +Y +++  GV       ++L
Sbjct: 436 GKATDYMREMKERGIDPNVVTYGTVIDGSFKCLGQEAALDVYHEMLCEGVEVNKFIVDSL 495

Query: 375 LSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKF 434
           ++GL + G+   A+ LF EM    V  D   Y  LIDGL K   +  A K+   L     
Sbjct: 496 VNGLKKNGKIEKAEALFREMNERGVLLDHVNYTTLIDGLFKTGNLPAAFKVGQELTEKNL 555

Query: 435 EFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKAND 494
                ++N  I+ LC  G+   A     ++   GL P  VTY+ MI    R+GK  KA  
Sbjct: 556 LPDAVVYNVFINCLCMLGKSKEAESFLEEMQSTGLKPDQVTYNTMIAAQSREGKTAKALK 615

Query: 495 FLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMA 535
            L  M+++   PN++T++TL+ G  +     K   LL++M+
Sbjct: 616 LLNGMKRSSIKPNLITYSTLIVGLFEAGAVEKAKYLLNEMS 656



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 128/449 (28%), Positives = 217/449 (48%), Gaps = 14/449 (3%)

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           D ++ N++++ F +++ GL  E        L   M   GV  D +T  T++ G CR G +
Sbjct: 102 DTVSYNVVMSGF-SEQGGLAPEA-------LLAEMCKRGVPFDAVTVNTVLVGLCRDGRV 153

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
             A  L + MV G    G I   ++  ++ ++D  CK G ++ A  +   MK +G+   V
Sbjct: 154 DRAAALAEVMVRG----GGIGGLDVVGWNSLVDGYCKVGDMETAFAVAERMKAQGVGVDV 209

Query: 229 VVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLEL 288
           V   +L+ G C AG  +    +   M   G  PN++T+ + I   C+   +++A  L E 
Sbjct: 210 VGYNSLVAGLCRAGEVDAARDMVDTMKRDGVEPNVVTYTMFIVEYCRRNAVDDAFSLYEE 269

Query: 289 MIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILN 348
           M+++G+ PD  T ++L+ G C  GR   A  +F  M   G     V+Y +LI+   K   
Sbjct: 270 MVRKGVLPDVVTLSALVGGLCKDGRFSEAYALFREMEKIGAAPNHVTYCMLIDTLAKAQR 329

Query: 349 VEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNI 408
             E++SL  +++S GV   +I Y  L+  L + G+   A+ +F      N  P+  TY +
Sbjct: 330 GNESLSLLGEVVSRGVVMDLIMYTALMDWLCKEGKIDEAKDMFRHALSDNHTPNGVTYTV 389

Query: 409 LIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKG 468
           LID LCK   V  A ++   +E       +  F+ +I+GL K G +  A +   ++ ++G
Sbjct: 390 LIDALCKAGNVDGAEQVLSEMEEKSISPNVVTFSSIINGLVKRGWVGKATDYMREMKERG 449

Query: 469 LVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVV 528
           + P VVTY  +I G  +    E A D    M   G   N    ++L++G  +N K  K  
Sbjct: 450 IDPNVVTYGTVIDGSFKCLGQEAALDVYHEMLCEGVEVNKFIVDSLVNGLKKNGKIEKAE 509

Query: 529 ELLHKMAEPERNLVPDDTTFSIVVDLLAK 557
            L  +M   ER ++ D   ++ ++D L K
Sbjct: 510 ALFREMN--ERGVLLDHVNYTTLIDGLFK 536



 Score =  184 bits (468), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 142/543 (26%), Positives = 242/543 (44%), Gaps = 59/543 (10%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CK+G  N++ A      M     SP + +F+ +   + K         + R++   G+ P
Sbjct: 395 CKAG--NVDGAEQVLSEMEEKSISPNVVTFSSIINGLVKRGWVGKATDYMREMKERGIDP 452

Query: 109 DFLTLNILIN----CFGNKE------------------------RGLCVENRIKEATWLF 140
           + +T   +I+    C G +                          GL    +I++A  LF
Sbjct: 453 NVVTYGTVIDGSFKCLGQEAALDVYHEMLCEGVEVNKFIVDSLVNGLKKNGKIEKAEALF 512

Query: 141 KNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMV--------------------- 179
           + M   GV  D + Y TLI+G  +TGNL  A ++ +++                      
Sbjct: 513 REMNERGVLLDHVNYTTLIDGLFKTGNLPAAFKVGQELTEKNLLPDAVVYNVFINCLCML 572

Query: 180 --SGDYENGLIS------KTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVC 231
             S + E+ L        K +  +Y+ +I +  +EG   KA +L   MK   I P ++  
Sbjct: 573 GKSKEAESFLEEMQSTGLKPDQVTYNTMIAAQSREGKTAKALKLLNGMKRSSIKPNLITY 632

Query: 232 TTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQ 291
           +TLI G   AG  E+   L  EM   G  P  LT   ++    +G + +    + E M+ 
Sbjct: 633 STLIVGLFEAGAVEKAKYLLNEMSSSGFSPTSLTHRRVLQACSQGRRSDLILEIHEWMMN 692

Query: 292 RGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEE 351
            GL  D   YN+L+   C  G    A  +   M  +G     +++N LI G+ K  +++ 
Sbjct: 693 AGLCADITVYNTLVRVLCYNGMTRKAMVVLEEMSGRGIAPDTITFNALILGHFKSGHLDN 752

Query: 352 AMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILID 411
           A S Y Q++ +G+   V T+NTLL GL  AG+ G +  + +EMK   +EP   TY+IL+ 
Sbjct: 753 AFSTYDQMLYHGISPNVATFNTLLGGLESAGRIGESDMVLNEMKKRGIEPSNLTYDILVT 812

Query: 412 GLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVP 471
           G  K +   EAV+L+  +    F   +  +N LI    K G +  A ELF+++  +G++P
Sbjct: 813 GYGKQSNKVEAVRLYCEMVGKGFLPKVSTYNALISDFSKVGMMSQAKELFNEMQNRGVLP 872

Query: 472 TVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELL 531
           T  TY I++ G  +     +   FL  M++ G +P+  T +++   F +   + +   LL
Sbjct: 873 TSCTYDILVSGWSKLRNGTEVRKFLKDMKEKGFSPSKGTLSSISRAFSKPGMSWEARRLL 932

Query: 532 HKM 534
             +
Sbjct: 933 KNL 935



 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 60/202 (29%), Positives = 107/202 (52%), Gaps = 7/202 (3%)

Query: 369 ITYNTLLSGLFQAGQAGYA-QKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFH 427
           ++YN ++SG  +  Q G A + L  EM    V  D  T N ++ GLC++  V  A  L  
Sbjct: 104 VSYNVVMSGFSE--QGGLAPEALLAEMCKRGVPFDAVTVNTVLVGLCRDGRVDRAAALAE 161

Query: 428 MLEMNKFEFGIEI--FNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCR 485
           ++       G+++  +N L+DG CK G ++ A+ +  ++  +G+   VV Y+ ++ GLCR
Sbjct: 162 VMVRGGGIGGLDVVGWNSLVDGYCKVGDMETAFAVAERMKAQGVGVDVVGYNSLVAGLCR 221

Query: 486 KGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDD 545
            G+++ A D +  M+++G  PNVVT+   +  + + N       L  +M    + ++PD 
Sbjct: 222 AGEVDAARDMVDTMKRDGVEPNVVTYTMFIVEYCRRNAVDDAFSLYEEMVR--KGVLPDV 279

Query: 546 TTFSIVVDLLAKDEKYHECSAV 567
            T S +V  L KD ++ E  A+
Sbjct: 280 VTLSALVGGLCKDGRFSEAYAL 301


>gi|296087527|emb|CBI34116.3| unnamed protein product [Vitis vinifera]
          Length = 727

 Score =  224 bits (572), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 141/504 (27%), Positives = 248/504 (49%), Gaps = 43/504 (8%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
           P I S N L   + ++   D  ++ YR L  +GL P+  T  I I       + LC +  
Sbjct: 190 PHIMSCNFLMNRLIEHGKIDMAVAIYRHLKRLGLNPNDYTYGIFI-------KALCRKGN 242

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
            +EA  +F+ M   GV P+ +T  T I G C      +     + + + ++        +
Sbjct: 243 FEEAVDVFREMEEAGVNPNAVTCSTYIEGLCSHKRSDLGYEALRALRAANW------PID 296

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
            F+Y+ +I   C E  + +A+++F++M   GI P   +   LIH +C AGN  +   L  
Sbjct: 297 TFAYTAVIRGFCSEMKLKEAEDVFIDMVNEGIAPDGYIYGALIHAYCKAGNLLQAVALHN 356

Query: 253 EMLDLGPRPNLLT----------------FNVMIDCLCKGGKINEANGLLELMIQRGLNP 296
           +M+  G + NL+                 +N+++D LCK GK+ EA  LL  M  R ++ 
Sbjct: 357 DMVSNGIKTNLVDQFKEFRDSGIFLDEVLYNIVVDALCKLGKVEEAVELLNEMKGRRMSL 416

Query: 297 DRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLY 356
           D   Y +L+ GYCL G++  A+ +F  M  +G +  +V+YNIL+ G+ +    +EA+ L 
Sbjct: 417 DVVHYTTLIAGYCLQGKLVDAKNMFEEMKERGIEPDIVTYNILVGGFSRNGLKKEALELL 476

Query: 357 RQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKN 416
             I + G++    T+N ++ GL  AG+   A+   + ++    +  L  Y+ ++DG CK 
Sbjct: 477 DCIGTQGLKPNSATHNRIIEGLCMAGKVKEAEAFLNTLE----DKCLENYSAMVDGYCKA 532

Query: 417 NCVQEAVKLFHMLE----MNKFEFGIE----IFNCLIDGLCKAGRLDNAWELFHKLPQKG 468
           N  ++A +LF  L     +      +E    ++  LI   C+ G +  A  +F  L ++G
Sbjct: 533 NFTRKAYELFSRLSKQGILRMLALDVEPNQIMYGKLIGAFCRDGDMKRAQLVFDMLVERG 592

Query: 469 LVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVV 528
           + P V+TY++MI+G CR   L +A D    M++ G  P+V+T+  ++ G  + N     +
Sbjct: 593 ITPDVITYTMMINGYCRVNCLREARDIFNDMKERGIKPDVITYTVVLDGHSKTNNLQDAI 652

Query: 529 ELLHKMAEPERNLVPDDTTFSIVV 552
            L  +M    R L PD  T++ ++
Sbjct: 653 NLYDEMI--ARGLQPDIVTYTALL 674



 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 140/473 (29%), Positives = 238/473 (50%), Gaps = 35/473 (7%)

Query: 44  FLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVS 103
           F+   C+ G  N  EA   F  M     +P          AV  + + + + S  R  + 
Sbjct: 233 FIKALCRKG--NFEEAVDVFREMEEAGVNP---------NAVTCSTYIEGLCSHKRSDLG 281

Query: 104 IGLLPDFLTLNILINCFGNKE--RGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLING 161
              L      N  I+ F      RG C E ++KEA  +F +M+  G+ PD   YG LI+ 
Sbjct: 282 YEALRALRAANWPIDTFAYTAVIRGFCSEMKLKEAEDVFIDMVNEGIAPDGYIYGALIHA 341

Query: 162 FCRTGNLSVALRLHKKMVSGDYENGLISKTNIFS----------YSIIIDSLCKEGLVDK 211
           +C+ GNL  A+ LH  MVS   +  L+ +   F           Y+I++D+LCK G V++
Sbjct: 342 YCKAGNLLQAVALHNDMVSNGIKTNLVDQFKEFRDSGIFLDEVLYNIVVDALCKLGKVEE 401

Query: 212 AKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMID 271
           A EL  EMKGR ++  VV  TTLI G+C  G   +   +F EM + G  P+++T+N+++ 
Sbjct: 402 AVELLNEMKGRRMSLDVVHYTTLIAGYCLQGKLVDAKNMFEEMKERGIEPDIVTYNILVG 461

Query: 272 CLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKH 331
              + G   EA  LL+ +  +GL P+  T+N +++G C+ G++  A E FL+     C  
Sbjct: 462 GFSRNGLKKEALELLDCIGTQGLKPNSATHNRIIEGLCMAGKVKEA-EAFLNTLEDKC-- 518

Query: 332 TVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTV--------ITYNTLLSGLFQAGQ 383
            + +Y+ +++GYCK     +A  L+ ++   G+ + +        I Y  L+    + G 
Sbjct: 519 -LENYSAMVDGYCKANFTRKAYELFSRLSKQGILRMLALDVEPNQIMYGKLIGAFCRDGD 577

Query: 384 AGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNC 443
              AQ +FD +    + PD+ TY ++I+G C+ NC++EA  +F+ ++    +  +  +  
Sbjct: 578 MKRAQLVFDMLVERGITPDVITYTMMINGYCRVNCLREARDIFNDMKERGIKPDVITYTV 637

Query: 444 LIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFL 496
           ++DG  K   L +A  L+ ++  +GL P +VTY+ ++ G C  G     N +L
Sbjct: 638 VLDGHSKTNNLQDAINLYDEMIARGLQPDIVTYTALLPGKCNFGSRHFDNQWL 690



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 117/466 (25%), Positives = 219/466 (46%), Gaps = 71/466 (15%)

Query: 147 GVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKE 206
           G  P +++   L+N     G + +A+ +++ +        L    N ++Y I I +LC++
Sbjct: 187 GFVPHIMSCNFLMNRLIEHGKIDMAVAIYRHL------KRLGLNPNDYTYGIFIKALCRK 240

Query: 207 GLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCC---------------AGNW------- 244
           G  ++A ++F EM+  G+NP  V C+T I G C                A NW       
Sbjct: 241 GNFEEAVDVFREMEEAGVNPNAVTCSTYIEGLCSHKRSDLGYEALRALRAANWPIDTFAY 300

Query: 245 -------------EEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQ 291
                        +E   +FI+M++ G  P+   +  +I   CK G + +A  L   M+ 
Sbjct: 301 TAVIRGFCSEMKLKEAEDVFIDMVNEGIAPDGYIYGALIHAYCKAGNLLQAVALHNDMVS 360

Query: 292 RGLNP----------------DRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVS 335
            G+                  D   YN ++D  C +G+++ A E+   M  +     VV 
Sbjct: 361 NGIKTNLVDQFKEFRDSGIFLDEVLYNIVVDALCKLGKVEEAVELLNEMKGRRMSLDVVH 420

Query: 336 YNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMK 395
           Y  LI GYC    + +A +++ ++   G+   ++TYN L+ G  + G    A +L D + 
Sbjct: 421 YTTLIAGYCLQGKLVDAKNMFEEMKERGIEPDIVTYNILVGGFSRNGLKKEALELLDCIG 480

Query: 396 LYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLD 455
              ++P+ +T+N +I+GLC    V+EA    + LE    +  +E ++ ++DG CKA    
Sbjct: 481 TQGLKPNSATHNRIIEGLCMAGKVKEAEAFLNTLE----DKCLENYSAMVDGYCKANFTR 536

Query: 456 NAWELFHKLPQKGLV--------PTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPN 507
            A+ELF +L ++G++        P  + Y  +I   CR G +++A      + + G  P+
Sbjct: 537 KAYELFSRLSKQGILRMLALDVEPNQIMYGKLIGAFCRDGDMKRAQLVFDMLVERGITPD 596

Query: 508 VVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
           V+T+  +++G+ + N   +  ++ + M   ER + PD  T+++V+D
Sbjct: 597 VITYTMMINGYCRVNCLREARDIFNDM--KERGIKPDVITYTVVLD 640



 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 107/444 (24%), Positives = 193/444 (43%), Gaps = 51/444 (11%)

Query: 137 TW-LFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVS------GDYENGL-- 187
            W  F  +   G + +V TY  LI   CR        RL +K+ S      G  E+ L  
Sbjct: 80  AWSFFTQLKESGFQHNVDTYAALIRVLCR-------WRLERKLQSLLSEIVGSKESVLGF 132

Query: 188 -------------------ISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
                               S   I    +++ +  + G+ D+A +   + K RG  P +
Sbjct: 133 DITALFDVLREGGGEVEGEHSSVLILVLDMLVKAYVRVGMFDEAIDALFQTKRRGFVPHI 192

Query: 229 VVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLEL 288
           + C  L++     G  +    ++  +  LG  PN  T+ + I  LC+ G   EA  +   
Sbjct: 193 MSCNFLMNRLIEHGKIDMAVAIYRHLKRLGLNPNDYTYGIFIKALCRKGNFEEAVDVFRE 252

Query: 289 MIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILN 348
           M + G+NP+  T ++ ++G C   R D   E   ++ +        +Y  +I G+C  + 
Sbjct: 253 MEEAGVNPNAVTCSTYIEGLCSHKRSDLGYEALRALRAANWPIDTFAYTAVIRGFCSEMK 312

Query: 349 VEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAG---QA----------GYAQKLFDEMK 395
           ++EA  ++  +++ G+      Y  L+    +AG   QA          G    L D+ K
Sbjct: 313 LKEAEDVFIDMVNEGIAPDGYIYGALIHAYCKAGNLLQAVALHNDMVSNGIKTNLVDQFK 372

Query: 396 LYN---VEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAG 452
            +    +  D   YNI++D LCK   V+EAV+L + ++  +    +  +  LI G C  G
Sbjct: 373 EFRDSGIFLDEVLYNIVVDALCKLGKVEEAVELLNEMKGRRMSLDVVHYTTLIAGYCLQG 432

Query: 453 RLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFN 512
           +L +A  +F ++ ++G+ P +VTY+I++ G  R G  ++A + L  +   G  PN  T N
Sbjct: 433 KLVDAKNMFEEMKERGIEPDIVTYNILVGGFSRNGLKKEALELLDCIGTQGLKPNSATHN 492

Query: 513 TLMHGFLQNNKTSKVVELLHKMAE 536
            ++ G     K  +    L+ + +
Sbjct: 493 RIIEGLCMAGKVKEAEAFLNTLED 516



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 79/297 (26%), Positives = 142/297 (47%), Gaps = 52/297 (17%)

Query: 126 GLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRL----------- 174
           G C++ ++ +A  +F+ M   G+ PD++TY  L+ GF R G    AL L           
Sbjct: 427 GYCLQGKLVDAKNMFEEMKERGIEPDIVTYNILVGGFSRNGLKKEALELLDCIGTQGLKP 486

Query: 175 ----HKKMVSGDYENGLISKTNIF----------SYSIIIDSLCKEGLVDKAKELFLEMK 220
               H +++ G    G + +   F          +YS ++D  CK     KA ELF  + 
Sbjct: 487 NSATHNRIIEGLCMAGKVKEAEAFLNTLEDKCLENYSAMVDGYCKANFTRKAYELFSRLS 546

Query: 221 GRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKIN 280
            +GI                           + ML L   PN + +  +I   C+ G + 
Sbjct: 547 KQGI---------------------------LRMLALDVEPNQIMYGKLIGAFCRDGDMK 579

Query: 281 EANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILI 340
            A  + +++++RG+ PD  TY  +++GYC V  +  AR+IF  M  +G K  V++Y +++
Sbjct: 580 RAQLVFDMLVERGITPDVITYTMMINGYCRVNCLREARDIFNDMKERGIKPDVITYTVVL 639

Query: 341 NGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLY 397
           +G+ K  N+++A++LY ++I+ G++  ++TY  LL G    G   +  +  +E KL+
Sbjct: 640 DGHSKTNNLQDAINLYDEMIARGLQPDIVTYTALLPGKCNFGSRHFDNQWLEEPKLF 696


>gi|222623994|gb|EEE58126.1| hypothetical protein OsJ_09025 [Oryza sativa Japonica Group]
          Length = 1269

 Score =  224 bits (572), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 157/547 (28%), Positives = 256/547 (46%), Gaps = 53/547 (9%)

Query: 57  NEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNIL 116
           NEA+     M+  +  P +  +  L     +  + D      +++V+ G+ P+ +T + L
Sbjct: 309 NEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNL 368

Query: 117 INCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHK 176
           +       RGLC   ++  A+ L K M+    RPD ITY  +I G  R  +   A RL  
Sbjct: 369 V-------RGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLS 421

Query: 177 KMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIH 236
           +M     EN  IS  N+++YSI+I  LC+ G  +KA +L  EM  +G+ P   V   LI 
Sbjct: 422 EM-----ENAGISP-NVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLIS 475

Query: 237 GFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNP 296
           G+C  GN      +F +M  +   P+L  +N +I  L K G++ E+      M +RGL P
Sbjct: 476 GYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLP 535

Query: 297 DRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLY 356
           + FTY+ L+ GY   G +++A ++   M   G K   V Y  L+  Y K  ++E+  S +
Sbjct: 536 NEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTF 595

Query: 357 RQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKN 416
           + ++  GV      Y  L+  L  +G    A ++   ++     PD+  Y+ LI GLCK 
Sbjct: 596 KSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKT 655

Query: 417 NCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTY 476
              ++A  +   +     +  I  +N LIDGLCK+G +  A  +F+ +  KGLVP  VTY
Sbjct: 656 ADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTY 715

Query: 477 SIMIHGLCRKGKLEKANDFLLYME----------------KNGCA--------------- 505
           + +I G C+ G +  +N F LY E                  GC+               
Sbjct: 716 TSLIDGSCKVGDI--SNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEM 773

Query: 506 -----PNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEK 560
                 ++ +FN L+ GF +  K  + ++LLH +    R LVP+  T   ++  L++  K
Sbjct: 774 FLRGHASISSFNNLVDGFCKRGKMQETLKLLHVIM--GRGLVPNALTIENIISGLSEAGK 831

Query: 561 YHECSAV 567
             E   +
Sbjct: 832 LSEVHTI 838



 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 137/477 (28%), Positives = 227/477 (47%), Gaps = 15/477 (3%)

Query: 77  SFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEA 136
           ++N+L   + ++   +    F + +   GL+PD  T   LIN       GLC   R  EA
Sbjct: 259 TYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALIN-------GLCKSRRSNEA 311

Query: 137 TWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSY 196
             L   M    ++P+V+ Y  LI+GF R GN   A ++ K+MV+   +       N  +Y
Sbjct: 312 KALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQ------PNKITY 365

Query: 197 SIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLD 256
             ++  LCK G +D+A  L  +M      P  +    +I G     + ++   L  EM +
Sbjct: 366 DNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMEN 425

Query: 257 LGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDT 316
            G  PN+ T+++MI  LC+ G+  +A+ LLE M  +GL P+ F Y  L+ GYC  G +  
Sbjct: 426 AGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSL 485

Query: 317 AREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLS 376
           A EIF  M        +  YN LI G  K+  VEE+   + Q+   G+     TY+ L+ 
Sbjct: 486 ACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIH 545

Query: 377 GLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEF 436
           G  + G    A++L   M    ++P+   Y  L++   K++ +++    F  +       
Sbjct: 546 GYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVML 605

Query: 437 GIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFL 496
              I+  LI  L  +G ++ A+ +   + + G VP V  YS +I GLC+    EKA   L
Sbjct: 606 DNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGIL 665

Query: 497 LYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
             M K G  PN+V +N L+ G  ++   S    + + +    + LVP+  T++ ++D
Sbjct: 666 DEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSIL--AKGLVPNCVTYTSLID 720



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 112/372 (30%), Positives = 195/372 (52%), Gaps = 8/372 (2%)

Query: 200 IDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGP 259
           +++ CK    D AK++ +EM+ RG     V    LI G C +G  EE  G   +M D G 
Sbjct: 229 LEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGL 288

Query: 260 RPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTARE 319
            P+  T+  +I+ LCK  + NEA  LL+ M    L P+   Y +L+DG+   G  D A +
Sbjct: 289 VPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFK 348

Query: 320 IFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLF 379
           +   M + G +   ++Y+ L+ G CK+  ++ A  L +Q++ +  R   ITYN ++ G F
Sbjct: 349 MIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHF 408

Query: 380 QAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIE 439
           +      A +L  EM+   + P++ TY+I+I GLC++   ++A  L   +     +    
Sbjct: 409 RHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAF 468

Query: 440 IFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYM 499
           ++  LI G C+ G +  A E+F K+ +  ++P +  Y+ +I GL + G++E++  +   M
Sbjct: 469 VYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQM 528

Query: 500 EKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDE 559
           ++ G  PN  T++ L+HG+L+N       +L+ +M   +  L P+D    I +DLL   E
Sbjct: 529 QERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRML--DTGLKPNDV---IYIDLL---E 580

Query: 560 KYHECSAVSKSS 571
            Y +   + K S
Sbjct: 581 SYFKSDDIEKVS 592



 Score =  191 bits (486), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 136/472 (28%), Positives = 219/472 (46%), Gaps = 43/472 (9%)

Query: 121 GNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVS 180
           G+     C       A  +   M   G   + +TY  LI G CR+G +  A    K M  
Sbjct: 226 GSALEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDM-- 283

Query: 181 GDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCC 240
            DY  GL+   + F+Y  +I+ LCK    ++AK L  EM    + P VVV   LI GF  
Sbjct: 284 EDY--GLV--PDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMR 339

Query: 241 AGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFT 300
            GN +E   +  EM+  G +PN +T++ ++  LCK G+++ A+ LL+ M++    PD  T
Sbjct: 340 EGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTIT 399

Query: 301 YNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQII 360
           YN +++G+        A  +   M + G    V +Y+I+I+G C+    E+A  L  ++ 
Sbjct: 400 YNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMT 459

Query: 361 SNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQ 420
           + G++     Y  L+SG  + G    A ++FD+M   NV PDL  YN LI GL K   V+
Sbjct: 460 TKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVE 519

Query: 421 EAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVV------ 474
           E+ K F  ++          ++ LI G  K G L++A +L  ++   GL P  V      
Sbjct: 520 ESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLL 579

Query: 475 -----------------------------TYSIMIHGLCRKGKLEKANDFLLYMEKNGCA 505
                                         Y I+IH L   G +E A   L  +EKNG  
Sbjct: 580 ESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSV 639

Query: 506 PNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAK 557
           P+V  +++L+ G  +     K   +L +M+  ++ + P+   ++ ++D L K
Sbjct: 640 PDVHVYSSLISGLCKTADREKAFGILDEMS--KKGVDPNIVCYNALIDGLCK 689



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 105/398 (26%), Positives = 200/398 (50%), Gaps = 8/398 (2%)

Query: 155 YGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKE 214
           +G+ +  +C+      A    KK++    E G     N  +Y+++I  LC+ G V++A  
Sbjct: 225 HGSALEAYCKVREFDTA----KKVLVEMRERG--CGLNTVTYNVLIAGLCRSGAVEEAFG 278

Query: 215 LFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLC 274
              +M+  G+ P       LI+G C +    E   L  EM     +PN++ +  +ID   
Sbjct: 279 FKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFM 338

Query: 275 KGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVV 334
           + G  +EA  +++ M+  G+ P++ TY++L+ G C +G++D A  +   M     +   +
Sbjct: 339 REGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTI 398

Query: 335 SYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEM 394
           +YN++I G+ +  + ++A  L  ++ + G+   V TY+ ++ GL Q+G+   A  L +EM
Sbjct: 399 TYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEM 458

Query: 395 KLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRL 454
               ++P+   Y  LI G C+   V  A ++F  +        +  +N LI GL K GR+
Sbjct: 459 TTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRV 518

Query: 455 DNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTL 514
           + + + F ++ ++GL+P   TYS +IHG  + G LE A   +  M   G  PN V +  L
Sbjct: 519 EESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDL 578

Query: 515 MHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVV 552
           +  + +++   KV      M   ++ ++ D+  + I++
Sbjct: 579 LESYFKSDDIEKVSSTFKSML--DQGVMLDNRIYGILI 614



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 154/613 (25%), Positives = 262/613 (42%), Gaps = 115/613 (18%)

Query: 25  FKSPRQIAAVSSPETQLNEFLHEN-----CKSGIINLNEARYFFGYMTHMQPSPPISSFN 79
           FK  +++ A      Q N+  ++N     CK G   ++ A      M      P   ++N
Sbjct: 347 FKMIKEMVAAG---VQPNKITYDNLVRGLCKMG--QMDRASLLLKQMVRDSHRPDTITYN 401

Query: 80  LLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWL 139
           L+     ++           ++ + G+ P+  T +I+I+       GLC     ++A+ L
Sbjct: 402 LIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIH-------GLCQSGEPEKASDL 454

Query: 140 FKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMV-------------------- 179
            + M   G++P+   Y  LI+G+CR GN+S+A  +  KM                     
Sbjct: 455 LEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSK 514

Query: 180 ------SGDY-----ENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
                 S  Y     E GL+   N F+YS +I    K G ++ A++L   M   G+ P  
Sbjct: 515 VGRVEESTKYFAQMQERGLL--PNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPND 572

Query: 229 VVCTTLIHGFCCAGNWEEVNGLFIEMLDLG------------------------------ 258
           V+   L+  +  + + E+V+  F  MLD G                              
Sbjct: 573 VIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSG 632

Query: 259 -----PRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGR 313
                  P++  ++ +I  LCK     +A G+L+ M ++G++P+   YN+L+DG C  G 
Sbjct: 633 IEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGD 692

Query: 314 IDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNT 373
           I  AR +F S+ +KG     V+Y  LI+G CK+ ++  A  LY ++++ G+      Y+ 
Sbjct: 693 ISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSV 752

Query: 374 LLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNK 433
           L +G   AG    A  L +EM L      +S++N L+DG CK   +QE +KL H++    
Sbjct: 753 LTTGCSSAGDLEQAMFLIEEMFLRG-HASISSFNNLVDGFCKRGKMQETLKLLHVIMGRG 811

Query: 434 FEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQK-------------------GLVPTVV 474
                     +I GL +AG+L     +F +L QK                   G +P  V
Sbjct: 812 LVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMINQGKIPLDV 871

Query: 475 TYSIMIHGLCRKGKLEKA---NDFLLYMEKN-GCAPNVVTFNTLMHGFLQNNKTSKVVEL 530
               MI   C++G L+KA    D ++      GC+    ++  ++    +  K S+ + L
Sbjct: 872 VDD-MIRDHCKEGNLDKALMLRDVIVAKSAPMGCS----SYLAIVDNLCRKGKLSEALNL 926

Query: 531 LHKMAEPERNLVP 543
           L +M +   NL P
Sbjct: 927 LKEM-DKRGNLQP 938



 Score =  148 bits (374), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 109/410 (26%), Positives = 183/410 (44%), Gaps = 64/410 (15%)

Query: 202 SLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIH------GFCCAGNWEEVNGLFIEML 255
           SLC   L + A  L ++M     +P VV+ +  IH      G   AG      G   E+ 
Sbjct: 131 SLCAGSLFNLANGLLIKMIRAYPSPPVVLAS--IHRALSDSGHPFAGGARRPRGYLQEVW 188

Query: 256 DLGPRPNLLTFNVMIDCLCKGGKINE---ANGLLELMIQRGL--NPDRFTYNSLMDGYCL 310
           +   R              +GG+ ++    +G    ++QR +  +  R  + S ++ YC 
Sbjct: 189 EGAGR--------------RGGRPDDERSGHGSQHSVLQRAVEGSAARGRHGSALEAYCK 234

Query: 311 VGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVIT 370
           V   DTA+++ + M  +GC    V+YN+LI G C+   VEEA    + +   G+     T
Sbjct: 235 VREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFT 294

Query: 371 YNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLE 430
           Y  L++GL ++ ++  A+ L DEM    ++P++  Y  LIDG  +     EA K+   + 
Sbjct: 295 YGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMV 354

Query: 431 MNKFEFGIEIFNCLIDGLCKAGRLD----------------------------------- 455
               +     ++ L+ GLCK G++D                                   
Sbjct: 355 AAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKK 414

Query: 456 NAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLM 515
           +A+ L  ++   G+ P V TYSIMIHGLC+ G+ EKA+D L  M   G  PN   +  L+
Sbjct: 415 DAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLI 474

Query: 516 HGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECS 565
            G+ +    S   E+  KM   + N++PD   ++ ++  L+K  +  E +
Sbjct: 475 SGYCREGNVSLACEIFDKMT--KVNVLPDLYCYNSLIFGLSKVGRVEEST 522


>gi|357499665|ref|XP_003620121.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495136|gb|AES76339.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 408

 Score =  224 bits (572), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 139/434 (32%), Positives = 218/434 (50%), Gaps = 58/434 (13%)

Query: 35  SSPETQLNEF----LHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRH 90
           SSP T   +F     HEN  S           F  +T+  P+PPIS F  +  ++A +  
Sbjct: 29  SSPSTIYTQFNNNPHHENLISR----------FNRLTNQIPTPPISQFGRILASLALSNR 78

Query: 91  YDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRP 150
           Y   +SF++KL   G+ PD  T N+LINCF           ++    +L           
Sbjct: 79  YSIALSFHQKLHFKGIKPDLFTYNVLINCFS----------QLGHTHFL----------- 117

Query: 151 DVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVD 210
           D ++Y TLING C+ G    ALRL K++      N  I + ++  Y+ II+ LCK+ LVD
Sbjct: 118 DRVSYETLINGLCKVGETRAALRLLKEV------NEKIVQYDVVMYTAIINGLCKDKLVD 171

Query: 211 KAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMI 270
            A +L+ EM  + ++P V     +I+GFC  G  ++  GLF +M       +  TFN ++
Sbjct: 172 DAFDLYTEMVAKRVSPDVFTYNAMIYGFCVVGRLKDAIGLFNDMKLENVEADEYTFNTLV 231

Query: 271 DCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCK 330
              CK G + E   ++ +M++ G+ PD  TYNSLMDGYCLV  +D A+ IF +M  +G  
Sbjct: 232 SAFCKEGNVREGKAVVAVMMKEGVKPDIITYNSLMDGYCLVKEVDKAKNIFNTMVQRGVT 291

Query: 331 HTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKL 390
             V + N+    +CK            +II +      I Y++L+ G  ++G+   A +L
Sbjct: 292 ANVRTMNLFQEMHCK------------EIIPD-----TIAYSSLIDGFCKSGRIPQALEL 334

Query: 391 FDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCK 450
            DEM      P++ TYN ++  LCK + V++ + L   +++   +     +  L +GL K
Sbjct: 335 VDEMHDRGQPPNIITYNSILYALCKIHHVEKTIALLRKIKVKGIQPDAYTYTILTNGLFK 394

Query: 451 AGRLDNAWELFHKL 464
            GRL+ A E+F  L
Sbjct: 395 DGRLEEAREIFPDL 408



 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 92/328 (28%), Positives = 163/328 (49%), Gaps = 34/328 (10%)

Query: 258 GPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTA 317
           G +P+L T+NV+I+C  + G  +                DR +Y +L++G C VG    A
Sbjct: 93  GIKPDLFTYNVLINCFSQLGHTHFL--------------DRVSYETLINGLCKVGETRAA 138

Query: 318 REIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSG 377
             +   ++ K  ++ VV Y  +ING CK   V++A  LY ++++  V   V TYN ++ G
Sbjct: 139 LRLLKEVNEKIVQYDVVMYTAIINGLCKDKLVDDAFDLYTEMVAKRVSPDVFTYNAMIYG 198

Query: 378 LFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFG 437
               G+   A  LF++MKL NVE D  T+N L+   CK   V+E   +  ++     +  
Sbjct: 199 FCVVGRLKDAIGLFNDMKLENVEADEYTFNTLVSAFCKEGNVREGKAVVAVMMKEGVKPD 258

Query: 438 IEIFNCLIDGLCKAGRLDNAWELFHKLPQKG------------------LVPTVVTYSIM 479
           I  +N L+DG C    +D A  +F+ + Q+G                  ++P  + YS +
Sbjct: 259 IITYNSLMDGYCLVKEVDKAKNIFNTMVQRGVTANVRTMNLFQEMHCKEIIPDTIAYSSL 318

Query: 480 IHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPER 539
           I G C+ G++ +A + +  M   G  PN++T+N++++   + +   K + LL K+    +
Sbjct: 319 IDGFCKSGRIPQALELVDEMHDRGQPPNIITYNSILYALCKIHHVEKTIALLRKIK--VK 376

Query: 540 NLVPDDTTFSIVVDLLAKDEKYHECSAV 567
            + PD  T++I+ + L KD +  E   +
Sbjct: 377 GIQPDAYTYTILTNGLFKDGRLEEAREI 404


>gi|296089773|emb|CBI39592.3| unnamed protein product [Vitis vinifera]
          Length = 577

 Score =  224 bits (572), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 151/527 (28%), Positives = 249/527 (47%), Gaps = 31/527 (5%)

Query: 11  FSSETVSKVKLSSLFKSPRQIAAVSSPETQLNEFLHENCKSGII------------NLNE 58
           F + T+S++     +   + I   ++P + L    +   +  +I             ++ 
Sbjct: 47  FDTPTISQLIAKQHWSKLKTIVKETNPSSLLQHLFNSEAQPDLILCYFKWTQKEFGAIHN 106

Query: 59  ARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLV--SIGLLPDFLTLNIL 116
              F   +  +  +   +    L  + AKN HY     F+   V  S G     +   ++
Sbjct: 107 VEQFCRLLHLLANAKNYNKIRALLDSFAKNAHYSNSTIFHSLSVLGSWGCANSIIVDMLV 166

Query: 117 INCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHK 176
                N E  L +E         F     +G R   ++   ++    + G + V   ++K
Sbjct: 167 WAYVKNGEMDLALEG--------FDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESVYK 218

Query: 177 KMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIH 236
           +M+            N+ ++ ++I+ LCK G   KA ++  +MK  G +P+V+   T+I 
Sbjct: 219 EMIRRRI------GVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIID 272

Query: 237 GFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNP 296
           G+C AG   + + L  EM+     PN +TFN++ID  C+   +  A  + E M ++GL P
Sbjct: 273 GYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQP 332

Query: 297 DRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLY 356
           +  TYNSL++G C  G++D A  +   M   G K  VV+YN LING+CK   ++EA  + 
Sbjct: 333 NVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREML 392

Query: 357 RQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKN 416
             I   G+   VIT+NTL+    +AG+   A  L   M    V P++STYN LI G C+ 
Sbjct: 393 DDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCRE 452

Query: 417 NCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKL---PQKGLVPTV 473
             V+EA KL   +E N  +  +  +N L+D LCK G    A  L  ++    +KG    +
Sbjct: 453 GNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMTLMEKKGRRANI 512

Query: 474 VTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQ 520
           VTY+++I G C KGKLE+AN  L  M + G  PN  T++ L    ++
Sbjct: 513 VTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYDILRDEMME 559



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 126/404 (31%), Positives = 221/404 (54%), Gaps = 11/404 (2%)

Query: 153 ITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKA 212
           I    L+  + + G + +AL    +  +GDY  G   + +  S + ++ SL KEG +   
Sbjct: 160 IIVDMLVWAYVKNGEMDLALEGFDR--AGDY--GF--RLSALSCNPMLVSLVKEGRIGVV 213

Query: 213 KELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDC 272
           + ++ EM  R I   VV    +I+G C  G +++   +  +M   G  P+++T+N +ID 
Sbjct: 214 ESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDG 273

Query: 273 LCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHT 332
            CK GK+ +A+ LL+ M+ + ++P+  T+N L+DG+C    +  A+++F  M  +G +  
Sbjct: 274 YCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPN 333

Query: 333 VVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFD 392
           VV+YN LING C    ++EA+ L  ++   G++  V+TYN L++G  +      A+++ D
Sbjct: 334 VVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLD 393

Query: 393 EMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAG 452
           ++    + P++ T+N LID   K   + +A  L  M+        +  +NCLI G C+ G
Sbjct: 394 DIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREG 453

Query: 453 RLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKAN---DFLLYMEKNGCAPNVV 509
            +  A +L  ++   GL   +VTY+I++  LC+KG+  KA    D +  MEK G   N+V
Sbjct: 454 NVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMTLMEKKGRRANIV 513

Query: 510 TFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
           T+N L+ GF    K  +   LL++M   E+ L+P+ TT+ I+ D
Sbjct: 514 TYNVLIKGFCNKGKLEEANRLLNEML--EKGLIPNRTTYDILRD 555



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 132/412 (32%), Positives = 209/412 (50%), Gaps = 16/412 (3%)

Query: 79  NLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATW 138
           ++L  A  KN   D  +  + +    G     L+ N ++         L  E RI     
Sbjct: 163 DMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPML-------VSLVKEGRIGVVES 215

Query: 139 LFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSI 198
           ++K MI   +  +V+T+  +ING C+ G    A  + + M +  +   +I+      Y+ 
Sbjct: 216 VYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVIT------YNT 269

Query: 199 IIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLG 258
           IID  CK G + KA  L  EM  + I+P  +    LI GFC   N      +F EM   G
Sbjct: 270 IIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQG 329

Query: 259 PRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAR 318
            +PN++T+N +I+ LC  GK++EA GL + M   GL P+  TYN+L++G+C    +  AR
Sbjct: 330 LQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAR 389

Query: 319 EIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGL 378
           E+   +  +G    V+++N LI+ Y K   +++A  L   ++  GV   V TYN L+ G 
Sbjct: 390 EMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGF 449

Query: 379 FQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFH---MLEMNKFE 435
            + G    A+KL  EM+   ++ DL TYNIL+D LCK    ++AV+L     ++E     
Sbjct: 450 CREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMTLMEKKGRR 509

Query: 436 FGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKG 487
             I  +N LI G C  G+L+ A  L +++ +KGL+P   TY I+   +  KG
Sbjct: 510 ANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYDILRDEMMEKG 561



 Score =  195 bits (495), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 118/385 (30%), Positives = 200/385 (51%), Gaps = 9/385 (2%)

Query: 157 TLINGFCRTGNLSVALRLHKKMVSGDY--ENGLISKTNIFSYSIIIDSLCKEGLVDKAKE 214
            L++ F +  + S +   H   V G +   N +I    +++Y        K G +D A E
Sbjct: 128 ALLDSFAKNAHYSNSTIFHSLSVLGSWGCANSIIVDMLVWAY-------VKNGEMDLALE 180

Query: 215 LFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLC 274
            F      G   + + C  ++      G    V  ++ EM+      N++TF+V+I+ LC
Sbjct: 181 GFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLC 240

Query: 275 KGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVV 334
           K GK  +A  ++E M   G +P   TYN+++DGYC  G++  A  +   M +K      +
Sbjct: 241 KVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEI 300

Query: 335 SYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEM 394
           ++NILI+G+C+  NV  A  ++ ++   G++  V+TYN+L++GL   G+   A  L D+M
Sbjct: 301 TFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKM 360

Query: 395 KLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRL 454
               ++P++ TYN LI+G CK   ++EA ++   +        +  FN LID   KAGR+
Sbjct: 361 SGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRM 420

Query: 455 DNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTL 514
           D+A+ L   +   G+ P V TY+ +I G CR+G +++A      ME NG   ++VT+N L
Sbjct: 421 DDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNIL 480

Query: 515 MHGFLQNNKTSKVVELLHKMAEPER 539
           +    +  +T K V LL +M   E+
Sbjct: 481 VDALCKKGETRKAVRLLDEMTLMEK 505



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 48/180 (26%), Positives = 92/180 (51%), Gaps = 2/180 (1%)

Query: 407 NILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQ 466
           ++L+    KN  +  A++ F       F       N ++  L K GR+     ++ ++ +
Sbjct: 163 DMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESVYKEMIR 222

Query: 467 KGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSK 526
           + +   VVT+ ++I+GLC+ GK +KA D +  M+  G +P+V+T+NT++ G+ +  K  K
Sbjct: 223 RRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFK 282

Query: 527 VVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKSSYRACLYVTIFQPSSL 586
              LL +M    + + P++ TF+I++D   +DE       V +   R  L   +   +SL
Sbjct: 283 ADALLKEMVA--KRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSL 340


>gi|218194640|gb|EEC77067.1| hypothetical protein OsI_15461 [Oryza sativa Indica Group]
          Length = 548

 Score =  224 bits (572), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 126/366 (34%), Positives = 200/366 (54%), Gaps = 3/366 (0%)

Query: 209 VDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLG-PRPNLLTFN 267
           +D A E F  M   G+     V   LI G C  G+  +   L  +ML  G P P +  F 
Sbjct: 173 LDDAMEKFKHMIDIGVPLDTAVYGCLIQGQCNRGDLVKAKELISDMLSKGIPPPCIKFFT 232

Query: 268 VMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSK 327
            +I+ LCK G++ E   +++L+I  G  P+  T+NSL+DGYCLVG +  A  +  SM S 
Sbjct: 233 SIINNLCKEGRVAEGKDIVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESV 292

Query: 328 GCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYA 387
           G +  + +YN L++GYCK   +++A++L+R ++   V  T ++YN +L GLFQA +   A
Sbjct: 293 GVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTVVA 352

Query: 388 QKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDG 447
           +++F EM    +   + TY  ++ GLC+NNC  EA  L   L     +F I  FN +I  
Sbjct: 353 KEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIRA 412

Query: 448 LCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPN 507
           + K GR+  A ELF  +   GLVPT++TY +MI  L ++   E A++    MEK+GC P+
Sbjct: 413 MFKVGRMQEAKELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSMEKSGCTPD 472

Query: 508 VVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAV 567
               N ++   L   + +K    L K+   ++ ++P+ TT S+++ L + + KY E   +
Sbjct: 473 SCILNEIIRMLLNKGEIAKAGHYLSKI--DKKGILPEATTTSLLIYLFSVNGKYREYIKL 530

Query: 568 SKSSYR 573
               YR
Sbjct: 531 LPEKYR 536



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 105/358 (29%), Positives = 180/358 (50%), Gaps = 5/358 (1%)

Query: 131 NRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISK 190
           +R+ +A   FK+MI  GV  D   YG LI G C  G+L  A  L   M+S       I  
Sbjct: 171 DRLDDAMEKFKHMIDIGVPLDTAVYGCLIQGQCNRGDLVKAKELISDMLSKG-----IPP 225

Query: 191 TNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGL 250
             I  ++ II++LCKEG V + K++   +   G  P ++   +L+ G+C  GN +E  GL
Sbjct: 226 PCIKFFTSIINNLCKEGRVAEGKDIVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGL 285

Query: 251 FIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCL 310
              M  +G  P++ T+N ++D  CK G+I++A  L   M+ + +     +YN ++ G   
Sbjct: 286 LDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQ 345

Query: 311 VGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVIT 370
             R   A+E+F  M   G   ++ +Y  ++ G C+    +EA  L  ++ S  V+  ++T
Sbjct: 346 ARRTVVAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILT 405

Query: 371 YNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLE 430
           +N ++  +F+ G+   A++LF  +  Y + P + TY ++I  L K    ++A  LF  +E
Sbjct: 406 FNIVIRAMFKVGRMQEAKELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSME 465

Query: 431 MNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGK 488
            +       I N +I  L   G +  A     K+ +KG++P   T S++I+     GK
Sbjct: 466 KSGCTPDSCILNEIIRMLLNKGEIAKAGHYLSKIDKKGILPEATTTSLLIYLFSVNGK 523



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 85/324 (26%), Positives = 156/324 (48%), Gaps = 9/324 (2%)

Query: 106 LLPDFLTLNILINC---FGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGF 162
           L+ D L+  I   C   F +    LC E R+ E   +   +I  G RP++IT+ +L++G+
Sbjct: 214 LISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDIVDLIIHTGQRPNLITFNSLVDGY 273

Query: 163 CRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGR 222
           C  GN+  A+ L   M S   E       +I++Y+ ++D  CK G +D A  LF +M  +
Sbjct: 274 CLVGNMKEAVGLLDSMESVGVE------PDIYTYNTLVDGYCKHGRIDDALTLFRDMLHK 327

Query: 223 GINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEA 282
            +    V    ++HG   A        +F EM++ G   ++ T+  ++  LC+    +EA
Sbjct: 328 RVTLTSVSYNIILHGLFQARRTVVAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEA 387

Query: 283 NGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILING 342
           N LLE +    +  D  T+N ++     VGR+  A+E+F ++ + G   T+++Y ++I  
Sbjct: 388 NMLLEKLFSMNVKFDILTFNIVIRAMFKVGRMQEAKELFAAISTYGLVPTILTYRVMITN 447

Query: 343 YCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPD 402
             K  + E+A +L+  +  +G        N ++  L   G+   A     ++    + P+
Sbjct: 448 LIKEESFEDADNLFSSMEKSGCTPDSCILNEIIRMLLNKGEIAKAGHYLSKIDKKGILPE 507

Query: 403 LSTYNILIDGLCKNNCVQEAVKLF 426
            +T ++LI     N   +E +KL 
Sbjct: 508 ATTTSLLIYLFSVNGKYREYIKLL 531



 Score = 82.8 bits (203), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 67/292 (22%), Positives = 120/292 (41%), Gaps = 15/292 (5%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CK G   + E +     + H    P + +FN L        +    +     + S+G+ P
Sbjct: 239 CKEG--RVAEGKDIVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEP 296

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           D  T N L++       G C   RI +A  LF++M+   V    ++Y  +++G  +    
Sbjct: 297 DIYTYNTLVD-------GYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRT 349

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
            VA  +  +M+    E+G+    +I +Y+ ++  LC+    D+A  L  ++    +   +
Sbjct: 350 VVAKEMFHEMI----ESGM--AVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDI 403

Query: 229 VVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLEL 288
           +    +I      G  +E   LF  +   G  P +LT+ VMI  L K     +A+ L   
Sbjct: 404 LTFNIVIRAMFKVGRMQEAKELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSS 463

Query: 289 MIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILI 340
           M + G  PD    N ++      G I  A      +  KG      + ++LI
Sbjct: 464 MEKSGCTPDSCILNEIIRMLLNKGEIAKAGHYLSKIDKKGILPEATTTSLLI 515



 Score = 39.3 bits (90), Expect = 5.7,   Method: Compositional matrix adjust.
 Identities = 34/143 (23%), Positives = 52/143 (36%), Gaps = 38/143 (26%)

Query: 447 GLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCA- 505
           G  +  RLD+A E F  +   G+      Y  +I G C +G L KA + +  M   G   
Sbjct: 166 GTGRLDRLDDAMEKFKHMIDIGVPLDTAVYGCLIQGQCNRGDLVKAKELISDMLSKGIPP 225

Query: 506 -----------------------------------PNVVTFNTLMHGFLQNNKTSKVVEL 530
                                              PN++TFN+L+ G+       + V L
Sbjct: 226 PCIKFFTSIINNLCKEGRVAEGKDIVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGL 285

Query: 531 LHKMAEPERNLVPDDTTFSIVVD 553
           L  M      + PD  T++ +VD
Sbjct: 286 LDSMESV--GVEPDIYTYNTLVD 306


>gi|357130476|ref|XP_003566874.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Brachypodium distachyon]
          Length = 810

 Score =  224 bits (572), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 134/454 (29%), Positives = 228/454 (50%), Gaps = 16/454 (3%)

Query: 99  RKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTL 158
           R++   GLLP    L++++       +GL  + R K+A  LF+ M   G+ PDV TY  L
Sbjct: 356 RQMTGQGLLPSTFELSLVL-------KGLLNDRRWKDAVCLFEEMADSGL-PDVFTYNNL 407

Query: 159 INGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLE 218
           I+  C+   L  AL L  +M           K +I +Y+ ++   CK+G +D+A +L+ E
Sbjct: 408 IHWHCQAHKLREALNLFDRMKKAGV------KPSINTYNSLLMGYCKKGCMDEAVKLYSE 461

Query: 219 MKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGK 278
           M   G  P VV   TL+ G+    +++    L  EM   G   N  T+NV+I+ +C   +
Sbjct: 462 MPMEGFKPNVVTYITLMRGYIAKKDFDNAYALLDEMKQNGVSCNDYTYNVLINGICMVDR 521

Query: 279 INEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNI 338
           + E +G+L+  +  G  P   TYNS+++G+   G + +A  ++  M  KG    +++Y  
Sbjct: 522 VCEVDGMLKSFMSEGFIPTMMTYNSIINGFVKAGMMGSAFTVYQQMREKGLPPNIITYTS 581

Query: 339 LINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYN 398
            I+GYC+    + A+ +   +   G++  ++ YN L++G  Q G   +A +L   +    
Sbjct: 582 FIDGYCRTGCSDMALKMLNDVRRRGLQPDIVAYNALINGFCQEGNMSHALQLLVILLKDG 641

Query: 399 VEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAW 458
           + P+   YN LI G    N ++E  K +  +           +  LIDG  K G +  A 
Sbjct: 642 LAPNTVVYNSLITGYKNLNMMKEVSKFYESMIKGGIVADTSTYTTLIDGFSKDGNVAFAL 701

Query: 459 ELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGF 518
           EL+ ++  KG +P   T++ + HGLCR G ++ A   L  M +    PNV  +N L++G+
Sbjct: 702 ELYSEMMAKGYIPDAFTFTALTHGLCRSGDIDGAKKLLEEMRRLDVRPNVFIYNMLINGY 761

Query: 519 LQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVV 552
           L++ K  +   L  +M      + PDDTT+ I+V
Sbjct: 762 LRDCKLQEAFRLHDEML--NMGIQPDDTTYDILV 793



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 135/458 (29%), Positives = 214/458 (46%), Gaps = 18/458 (3%)

Query: 101 LVSIGLLPDFLTLNILINCFGNKE---------RGLCVENRIKEATWLFKNMIAFGVRPD 151
           LV  G + + L +N  +   G K          RG C+   +  A  LFK  +  G+ P 
Sbjct: 272 LVKTGRMEEALRVNDEMRDAGKKMDVIVATTLMRGYCLRQEVGNALNLFKETLKDGIVPT 331

Query: 152 VITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDK 211
            + YG LI G  + G    A  L ++M       GL+  T  F  S+++  L  +     
Sbjct: 332 KVMYGVLIRGCDQVGMTQKAYELCRQMTG----QGLLPST--FELSLVLKGLLNDRRWKD 385

Query: 212 AKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMID 271
           A  LF EM   G+ P V     LIH  C A    E   LF  M   G +P++ T+N ++ 
Sbjct: 386 AVCLFEEMADSGL-PDVFTYNNLIHWHCQAHKLREALNLFDRMKKAGVKPSINTYNSLLM 444

Query: 272 CLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKH 331
             CK G ++EA  L   M   G  P+  TY +LM GY      D A  +   M   G   
Sbjct: 445 GYCKKGCMDEAVKLYSEMPMEGFKPNVVTYITLMRGYIAKKDFDNAYALLDEMKQNGVSC 504

Query: 332 TVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLF 391
              +YN+LING C +  V E   + +  +S G   T++TYN++++G  +AG  G A  ++
Sbjct: 505 NDYTYNVLINGICMVDRVCEVDGMLKSFMSEGFIPTMMTYNSIINGFVKAGMMGSAFTVY 564

Query: 392 DEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKA 451
            +M+   + P++ TY   IDG C+  C   A+K+ + +     +  I  +N LI+G C+ 
Sbjct: 565 QQMREKGLPPNIITYTSFIDGYCRTGCSDMALKMLNDVRRRGLQPDIVAYNALINGFCQE 624

Query: 452 GRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTF 511
           G + +A +L   L + GL P  V Y+ +I G      +++ + F   M K G   +  T+
Sbjct: 625 GNMSHALQLLVILLKDGLAPNTVVYNSLITGYKNLNMMKEVSKFYESMIKGGIVADTSTY 684

Query: 512 NTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFS 549
            TL+ GF ++   +  +EL  +M    +  +PD  TF+
Sbjct: 685 TTLIDGFSKDGNVAFALELYSEMM--AKGYIPDAFTFT 720



 Score =  188 bits (477), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 141/505 (27%), Positives = 229/505 (45%), Gaps = 51/505 (10%)

Query: 63  FGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGN 122
           + +M      P I S   L    A+       ++ + ++   G   D    + L++    
Sbjct: 145 YAHMVARGVVPDIKSRTDLLIRTARGSSAKDALALFMEMRGRGYRVDAWMFDALMSA--- 201

Query: 123 KERGLCVENRIKE-ATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSG 181
                C++  + E A  LF  M    + PD   Y   I   C+ G+   ALR+ ++M   
Sbjct: 202 -----CLKEGMHEDAVRLFDEMPGAEIDPDQRVYALAITALCKLGDGGRALRMLREMKEV 256

Query: 182 DYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCA 241
            ++      T  F+Y  ++D L K G +++A  +  EM+  G    V+V TTL+ G+C  
Sbjct: 257 GFD------TCDFTYRTMVDVLVKTGRMEEALRVNDEMRDAGKKMDVIVATTLMRGYCLR 310

Query: 242 GNWEEVNGLFIEMLDLGPRPNLLTFNVMI-DC-----------LCK-------------- 275
                   LF E L  G  P  + + V+I  C           LC+              
Sbjct: 311 QEVGNALNLFKETLKDGIVPTKVMYGVLIRGCDQVGMTQKAYELCRQMTGQGLLPSTFEL 370

Query: 276 ----GGKIN-----EANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHS 326
                G +N     +A  L E M   GL PD FTYN+L+  +C   ++  A  +F  M  
Sbjct: 371 SLVLKGLLNDRRWKDAVCLFEEMADSGL-PDVFTYNNLIHWHCQAHKLREALNLFDRMKK 429

Query: 327 KGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGY 386
            G K ++ +YN L+ GYCK   ++EA+ LY ++   G +  V+TY TL+ G         
Sbjct: 430 AGVKPSINTYNSLLMGYCKKGCMDEAVKLYSEMPMEGFKPNVVTYITLMRGYIAKKDFDN 489

Query: 387 AQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLID 446
           A  L DEMK   V  +  TYN+LI+G+C  + V E   +        F   +  +N +I+
Sbjct: 490 AYALLDEMKQNGVSCNDYTYNVLINGICMVDRVCEVDGMLKSFMSEGFIPTMMTYNSIIN 549

Query: 447 GLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAP 506
           G  KAG + +A+ ++ ++ +KGL P ++TY+  I G CR G  + A   L  + + G  P
Sbjct: 550 GFVKAGMMGSAFTVYQQMREKGLPPNIITYTSFIDGYCRTGCSDMALKMLNDVRRRGLQP 609

Query: 507 NVVTFNTLMHGFLQNNKTSKVVELL 531
           ++V +N L++GF Q    S  ++LL
Sbjct: 610 DIVAYNALINGFCQEGNMSHALQLL 634



 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 120/452 (26%), Positives = 201/452 (44%), Gaps = 42/452 (9%)

Query: 136 ATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFS 195
           AT  + +M+A GV PD+ +   L+    R  +   AL L  +M    Y      + + + 
Sbjct: 141 ATDTYAHMVARGVVPDIKSRTDLLIRTARGSSAKDALALFMEMRGRGY------RVDAWM 194

Query: 196 YSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEML 255
           +  ++ +  KEG+ + A  LF EM G  I+P   V    I   C  G+      +  EM 
Sbjct: 195 FDALMSACLKEGMHEDAVRLFDEMPGAEIDPDQRVYALAITALCKLGDGGRALRMLREMK 254

Query: 256 DLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRID 315
           ++G      T+  M+D L K G++ EA  + + M   G   D     +LM GYCL   + 
Sbjct: 255 EVGFDTCDFTYRTMVDVLVKTGRMEEALRVNDEMRDAGKKMDVIVATTLMRGYCLRQEVG 314

Query: 316 TAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQT-------- 367
            A  +F      G   T V Y +LI G  ++   ++A  L RQ+   G+  +        
Sbjct: 315 NALNLFKETLKDGIVPTKVMYGVLIRGCDQVGMTQKAYELCRQMTGQGLLPSTFELSLVL 374

Query: 368 --------------------------VITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEP 401
                                     V TYN L+    QA +   A  LFD MK   V+P
Sbjct: 375 KGLLNDRRWKDAVCLFEEMADSGLPDVFTYNNLIHWHCQAHKLREALNLFDRMKKAGVKP 434

Query: 402 DLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELF 461
            ++TYN L+ G CK  C+ EAVKL+  + M  F+  +  +  L+ G       DNA+ L 
Sbjct: 435 SINTYNSLLMGYCKKGCMDEAVKLYSEMPMEGFKPNVVTYITLMRGYIAKKDFDNAYALL 494

Query: 462 HKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQN 521
            ++ Q G+     TY+++I+G+C   ++ + +  L      G  P ++T+N++++GF++ 
Sbjct: 495 DEMKQNGVSCNDYTYNVLINGICMVDRVCEVDGMLKSFMSEGFIPTMMTYNSIINGFVKA 554

Query: 522 NKTSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
                   +  +M   E+ L P+  T++  +D
Sbjct: 555 GMMGSAFTVYQQMR--EKGLPPNIITYTSFID 584



 Score =  145 bits (366), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 104/384 (27%), Positives = 176/384 (45%), Gaps = 52/384 (13%)

Query: 32  AAVSSPETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSF-NLLFGAVAKNRH 90
           A V       N  L   CK G   ++EA   +  M      P + ++  L+ G +AK + 
Sbjct: 430 AGVKPSINTYNSLLMGYCKKGC--MDEAVKLYSEMPMEGFKPNVVTYITLMRGYIAK-KD 486

Query: 91  YDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRP 150
           +D   +   ++   G+  +  T N+LIN       G+C+ +R+ E   + K+ ++ G  P
Sbjct: 487 FDNAYALLDEMKQNGVSCNDYTYNVLIN-------GICMVDRVCEVDGMLKSFMSEGFIP 539

Query: 151 DVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVD 210
            ++TY ++INGF + G +  A  ++++M     E GL    NI +Y+  ID  C+ G  D
Sbjct: 540 TMMTYNSIINGFVKAGMMGSAFTVYQQM----REKGL--PPNIITYTSFIDGYCRTGCSD 593

Query: 211 KAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFN--- 267
            A ++  +++ RG+ P +V    LI+GFC  GN      L + +L  G  PN + +N   
Sbjct: 594 MALKMLNDVRRRGLQPDIVAYNALINGFCQEGNMSHALQLLVILLKDGLAPNTVVYNSLI 653

Query: 268 --------------------------------VMIDCLCKGGKINEANGLLELMIQRGLN 295
                                            +ID   K G +  A  L   M+ +G  
Sbjct: 654 TGYKNLNMMKEVSKFYESMIKGGIVADTSTYTTLIDGFSKDGNVAFALELYSEMMAKGYI 713

Query: 296 PDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSL 355
           PD FT+ +L  G C  G ID A+++   M     +  V  YN+LINGY +   ++EA  L
Sbjct: 714 PDAFTFTALTHGLCRSGDIDGAKKLLEEMRRLDVRPNVFIYNMLINGYLRDCKLQEAFRL 773

Query: 356 YRQIISNGVRQTVITYNTLLSGLF 379
           + ++++ G++    TY+ L+S  F
Sbjct: 774 HDEMLNMGIQPDDTTYDILVSKKF 797



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 97/359 (27%), Positives = 172/359 (47%), Gaps = 3/359 (0%)

Query: 212 AKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMID 271
           A  LF+EM+GRG      +   L+      G  E+   LF EM      P+   + + I 
Sbjct: 176 ALALFMEMRGRGYRVDAWMFDALMSACLKEGMHEDAVRLFDEMPGAEIDPDQRVYALAIT 235

Query: 272 CLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKH 331
            LCK G    A  +L  M + G +   FTY +++D     GR++ A  +   M   G K 
Sbjct: 236 ALCKLGDGGRALRMLREMKEVGFDTCDFTYRTMVDVLVKTGRMEEALRVNDEMRDAGKKM 295

Query: 332 TVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLF 391
            V+    L+ GYC    V  A++L+++ + +G+  T + Y  L+ G  Q G    A +L 
Sbjct: 296 DVIVATTLMRGYCLRQEVGNALNLFKETLKDGIVPTKVMYGVLIRGCDQVGMTQKAYELC 355

Query: 392 DEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKA 451
            +M    + P     ++++ GL  +   ++AV LF  +  +     +  +N LI   C+A
Sbjct: 356 RQMTGQGLLPSTFELSLVLKGLLNDRRWKDAVCLFEEMADSGLP-DVFTYNNLIHWHCQA 414

Query: 452 GRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTF 511
            +L  A  LF ++ + G+ P++ TY+ ++ G C+KG +++A      M   G  PNVVT+
Sbjct: 415 HKLREALNLFDRMKKAGVKPSINTYNSLLMGYCKKGCMDEAVKLYSEMPMEGFKPNVVTY 474

Query: 512 NTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKS 570
            TLM G++          LL +M   +  +  +D T++++++ +   ++  E   + KS
Sbjct: 475 ITLMRGYIAKKDFDNAYALLDEMK--QNGVSCNDYTYNVLINGICMVDRVCEVDGMLKS 531


>gi|115441099|ref|NP_001044829.1| Os01g0852900 [Oryza sativa Japonica Group]
 gi|18461197|dbj|BAB84394.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|113534360|dbj|BAF06743.1| Os01g0852900 [Oryza sativa Japonica Group]
 gi|125572662|gb|EAZ14177.1| hypothetical protein OsJ_04103 [Oryza sativa Japonica Group]
          Length = 703

 Score =  224 bits (571), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 150/553 (27%), Positives = 268/553 (48%), Gaps = 54/553 (9%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
           N  L   C  G  +L+ A   F  +   Q +P   +++ L   +AK    D  +    ++
Sbjct: 162 NIVLRSLCARG--DLDRAVTLFDSLRRRQVAPDRITYSTLMCGLAKQDRLDHALDLLDEM 219

Query: 102 VSIGLLPDFLTLNILIN-CFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLIN 160
               + PD +  N L+  CF   E     E  ++    L K+    G RP++ TY  +++
Sbjct: 220 PRSRVQPDVVCYNALLGGCFKAGE----FEKVMRVWDKLVKDP---GARPNLATYNVMLD 272

Query: 161 GFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMK 220
           G C+ G       + ++MV+ + +       ++ +Y I+I  LC+ G VD A  ++ E+ 
Sbjct: 273 GLCKFGRFKEVGEVWERMVANNLQ------PDVITYGILIHGLCRSGDVDGAARVYSEII 326

Query: 221 GRGINPAVVVCTTLIHGFCCAGNWEE----------------------VNGLF------- 251
             G+     +  +L+ GFC AG  +E                      + GLF       
Sbjct: 327 KTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLRNLRTYNIMIKGLFDSGMVDE 386

Query: 252 -IEMLDLGPR-----PNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLM 305
            IE+ DL  +     P+ +TF  +I  LC+ G  N+A  + E     G   D F+Y+S++
Sbjct: 387 AIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMI 446

Query: 306 DGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVR 365
           +G C VGR+  A +++  M   GCK     YN LI+G+C++    +A+ +Y ++  NG  
Sbjct: 447 NGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCS 506

Query: 366 QTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKL 425
            TVITYNTL+ GL +A +   A  +  EM      PD++TY  LI GL  +  + +A+ +
Sbjct: 507 PTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSI 566

Query: 426 FHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQ-KGLVPTVVTYSIMIHGLC 484
           +  +     +  + + N LI GLC AG++D A  +F  + + K   P +VTY+ ++ GL 
Sbjct: 567 WKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLY 626

Query: 485 RKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPD 544
             G ++KA      + ++G  P+++++NT + G    ++  + ++LL ++    R ++P 
Sbjct: 627 ETGYIDKAATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLDEVL--SRGIIPT 684

Query: 545 DTTFSIVVDLLAK 557
             T++I+V  + K
Sbjct: 685 VITWNILVRAVIK 697



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 144/501 (28%), Positives = 239/501 (47%), Gaps = 73/501 (14%)

Query: 56  LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLV-SIGLLPDFLTLN 114
           L+ A      M   +  P +  +N L G   K   ++ V+  + KLV   G  P+  T N
Sbjct: 209 LDHALDLLDEMPRSRVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYN 268

Query: 115 ILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRL 174
           ++++       GLC   R KE   +++ M+A  ++PDVITYG LI+G CR+G++  A R+
Sbjct: 269 VMLD-------GLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARV 321

Query: 175 HKK---------------MVSGDYENGLISKT-------------NIFSYSIIIDSLCKE 206
           + +               +V G  + G + +              N+ +Y+I+I  L   
Sbjct: 322 YSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLRNLRTYNIMIKGLFDS 381

Query: 207 GLVDKAKELF-LEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLT 265
           G+VD+A EL+ L  K     P  V   TLIHG C  G   +   +F E    G + ++ +
Sbjct: 382 GMVDEAIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFS 441

Query: 266 FNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMH 325
           ++ MI+ LC  G++ +A  + E M + G  P+   YN+L+ G+C V R   A  I+  M 
Sbjct: 442 YSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMA 501

Query: 326 SKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQ----- 380
             GC  TV++YN LI+G CK    +EA S+ R+++ NG    + TY +L+ GLF      
Sbjct: 502 DNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKID 561

Query: 381 ------------------------------AGQAGYAQKLFDEMK-LYNVEPDLSTYNIL 409
                                         AG+   A  +F +MK   N  P+L TYN L
Sbjct: 562 DALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTL 621

Query: 410 IDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGL 469
           +DGL +   + +A  L+  +  +  E  I  +N  I GLC   R+    +L  ++  +G+
Sbjct: 622 MDGLYETGYIDKAATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLDEVLSRGI 681

Query: 470 VPTVVTYSIMIHGLCRKGKLE 490
           +PTV+T++I++  + + G ++
Sbjct: 682 IPTVITWNILVRAVIKYGPIQ 702



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 147/501 (29%), Positives = 243/501 (48%), Gaps = 31/501 (6%)

Query: 80  LLFGAVAKNRHYDAVISFYRKLVSI-GLLPDFLTLNILINCFGNKERGLCVENRIKEATW 138
           ++  A ++    DA +  +R L SI G  P   + N L++ F    R         +A  
Sbjct: 88  VVLSAFSRAIMPDAALDAFRALPSILGCNPGIRSHNALLDAFVRARR-------FSDADA 140

Query: 139 LFKNMI--AFGVR--PDVITYGTLINGFCRTGNLSVAL----RLHKKMVSGDYENGLISK 190
            F ++   AFG R  P++ TY  ++   C  G+L  A+     L ++ V+ D        
Sbjct: 141 FFASLSHGAFGRRIAPNLQTYNIVLRSLCARGDLDRAVTLFDSLRRRQVAPDR------- 193

Query: 191 TNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGL 250
               +YS ++  L K+  +D A +L  EM    + P VV    L+ G   AG +E+V  +
Sbjct: 194 ---ITYSTLMCGLAKQDRLDHALDLLDEMPRSRVQPDVVCYNALLGGCFKAGEFEKVMRV 250

Query: 251 FIEML-DLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYC 309
           + +++ D G RPNL T+NVM+D LCK G+  E   + E M+   L PD  TY  L+ G C
Sbjct: 251 WDKLVKDPGARPNLATYNVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLC 310

Query: 310 LVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVI 369
             G +D A  ++  +   G       YN L+ G+C+   V+EA   +      G+R  + 
Sbjct: 311 RSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLRN-LR 369

Query: 370 TYNTLLSGLFQAGQAGYAQKLFDEM-KLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHM 428
           TYN ++ GLF +G    A +L+D + K     PD  T+  LI GLC+N    +A  +F  
Sbjct: 370 TYNIMIKGLFDSGMVDEAIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEE 429

Query: 429 LEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGK 488
             ++  +  +  ++ +I+GLC  GRL +A +++ K+ + G  P    Y+ +I G C+  +
Sbjct: 430 ARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYR 489

Query: 489 LEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTF 548
              A      M  NGC+P V+T+NTL+ G  +  K  +   +  +M E      PD TT+
Sbjct: 490 TSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVE--NGFTPDITTY 547

Query: 549 SIVVDLLAKDEKYHECSAVSK 569
             ++  L  D+K  +  ++ K
Sbjct: 548 GSLIRGLFSDKKIDDALSIWK 568



 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 149/548 (27%), Positives = 258/548 (47%), Gaps = 54/548 (9%)

Query: 56  LNEARYFFGYMTH----MQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFL 111
            ++A  FF  ++H     + +P + ++N++  ++      D  ++ +  L    + PD +
Sbjct: 135 FSDADAFFASLSHGAFGRRIAPNLQTYNIVLRSLCARGDLDRAVTLFDSLRRRQVAPDRI 194

Query: 112 TLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVA 171
           T + L+ C      GL  ++R+  A  L   M    V+PDV+ Y  L+ G  + G     
Sbjct: 195 TYSTLM-C------GLAKQDRLDHALDLLDEMPRSRVQPDVVCYNALLGGCFKAGEFEKV 247

Query: 172 LRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVC 231
           +R+  K+V    + G  ++ N+ +Y++++D LCK G   +  E++  M    + P V+  
Sbjct: 248 MRVWDKLVK---DPG--ARPNLATYNVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITY 302

Query: 232 TTLIHGFCCAGNWEEVNGLFIEMLDLG--------------------------------- 258
             LIHG C +G+ +    ++ E++  G                                 
Sbjct: 303 GILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGF 362

Query: 259 -PRPNLLTFNVMIDCLCKGGKINEANGLLELMIQR-GLNPDRFTYNSLMDGYCLVGRIDT 316
               NL T+N+MI  L   G ++EA  L +L+ +     PD  T+ +L+ G C  G  + 
Sbjct: 363 AGLRNLRTYNIMIKGLFDSGMVDEAIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFANK 422

Query: 317 AREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLS 376
           A  IF      G +  V SY+ +ING C +  + +A+ +Y ++  +G +     YN L+S
Sbjct: 423 AFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALIS 482

Query: 377 GLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEF 436
           G  Q  +   A +++ +M      P + TYN LIDGLCK    QEA  +   +  N F  
Sbjct: 483 GFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTP 542

Query: 437 GIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKA-NDF 495
            I  +  LI GL    ++D+A  ++ ++  KGL   V+ ++I+IHGLC  GK+++A + F
Sbjct: 543 DITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVF 602

Query: 496 LLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLL 555
               EK  C PN+VT+NTLM G  +     K   L   +   E  L PD  +++  +  L
Sbjct: 603 SDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAATLWTSIT--EDGLEPDIISYNTRIKGL 660

Query: 556 AKDEKYHE 563
              ++ HE
Sbjct: 661 CSCDRIHE 668



 Score = 55.8 bits (133), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 34/130 (26%), Positives = 61/130 (46%), Gaps = 10/130 (7%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPP-ISSFNLLFGAVAKNRHYDAVISFYRK 100
           N  +H  C +G   ++EA + F  M   +  PP + ++N L   + +  + D   + +  
Sbjct: 583 NILIHGLCSAG--KVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAATLWTS 640

Query: 101 LVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLIN 160
           +   GL PD ++ N  I       +GLC  +RI E   L   +++ G+ P VIT+  L+ 
Sbjct: 641 ITEDGLEPDIISYNTRI-------KGLCSCDRIHEGIQLLDEVLSRGIIPTVITWNILVR 693

Query: 161 GFCRTGNLSV 170
              + G + V
Sbjct: 694 AVIKYGPIQV 703


>gi|224071479|ref|XP_002303480.1| predicted protein [Populus trichocarpa]
 gi|222840912|gb|EEE78459.1| predicted protein [Populus trichocarpa]
          Length = 836

 Score =  224 bits (571), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 148/545 (27%), Positives = 253/545 (46%), Gaps = 48/545 (8%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
           N  +H  CKSG   L+EA  F   M   + SP + ++++    + K    D      +++
Sbjct: 295 NNIIHGLCKSG--RLDEAYRFKEKMVKEKVSPSLITYSVFINGLIKLEKIDEANCVLKEM 352

Query: 102 VSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLING 161
             +G +P+ +  N LI+       G C    I EA  +  +M++ G+ P+ +T  +LI G
Sbjct: 353 SELGFVPNEVVYNTLID-------GYCKMGNISEALKIRDDMLSKGISPNSVTLNSLIQG 405

Query: 162 FCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSI----------------------- 198
           FC++  +  A  + ++M+      GL      FS  I                       
Sbjct: 406 FCKSDQIGQAENVLEEMIG----RGLPINQGSFSMVINWLCLKFRFVTALHFIREMLLRN 461

Query: 199 ----------IIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVN 248
                     ++  LCK G   +A EL+  + G+G  P +V    LIHG C AGN +E  
Sbjct: 462 LRPNDGLLTTLVSGLCKAGKQGEAVELWCRLLGKGFVPNIVTSNALIHGLCKAGNMQETL 521

Query: 249 GLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGY 308
            L  +ML+ G   + +T+N +I   CK GK+ E   L E M+++G+ PD +T+N L+ G 
Sbjct: 522 KLLRDMLERGLVFDRITYNTLISGCCKEGKVKEGFELKEEMVKKGIQPDIYTFNLLLHGL 581

Query: 309 CLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTV 368
           C   +ID A  ++      G    V +Y ++I+GYCK   VEE  +L  +++S  +    
Sbjct: 582 CNADKIDEASRLWHECKKNGYVPNVYTYGVMIDGYCKANKVEEGENLLNELVSKKLELNS 641

Query: 369 ITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHM 428
           + YN+L+      G    A +L D+MK   V    +TY+ L+ GLC    V +A  L   
Sbjct: 642 VVYNSLIRAYCINGNMNAAFRLRDDMKSRGVLLSCATYSSLMHGLCNIGLVDDAKHLLDE 701

Query: 429 LEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGK 488
           +        +  +  +I G  K G+++    +  ++    + P   TY+IMI G C+ GK
Sbjct: 702 MRKEGLLPNVVCYTTIIGGYSKLGQMNKVNIVLQEMSSHNIHPNKFTYTIMIDGFCKLGK 761

Query: 489 LEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTF 548
            ++A   L  M + G  P+ VT+N   +G  +  K  +  ++  +M+     L  D+ T+
Sbjct: 762 TKEAAKLLNEMTEKGILPDAVTYNAFTNGLCKEGKVEEAFKVCDEMSSGAVCL--DEITY 819

Query: 549 SIVVD 553
           + ++D
Sbjct: 820 TTLID 824



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 142/462 (30%), Positives = 218/462 (47%), Gaps = 13/462 (2%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
           P + +   L  ++ K          Y  +   G++PD    + +IN F       C  +R
Sbjct: 219 PSLKTCTFLLSSLVKANELKKSYEVYDFICLGGIIPDVHLFSTMINAF-------CKGHR 271

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
             +A  LF  M   GV P+V+TY  +I+G C++G L  A R  +KMV       LI+   
Sbjct: 272 EDDAIGLFSKMEKLGVAPNVVTYNNIIHGLCKSGRLDEAYRFKEKMVKEKVSPSLIT--- 328

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
              YS+ I+ L K   +D+A  +  EM   G  P  VV  TLI G+C  GN  E   +  
Sbjct: 329 ---YSVFINGLIKLEKIDEANCVLKEMSELGFVPNEVVYNTLIDGYCKMGNISEALKIRD 385

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
           +ML  G  PN +T N +I   CK  +I +A  +LE MI RGL  ++ +++ +++  CL  
Sbjct: 386 DMLSKGISPNSVTLNSLIQGFCKSDQIGQAENVLEEMIGRGLPINQGSFSMVINWLCLKF 445

Query: 313 RIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYN 372
           R  TA      M  +  +        L++G CK     EA+ L+ +++  G    ++T N
Sbjct: 446 RFVTALHFIREMLLRNLRPNDGLLTTLVSGLCKAGKQGEAVELWCRLLGKGFVPNIVTSN 505

Query: 373 TLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMN 432
            L+ GL +AG      KL  +M    +  D  TYN LI G CK   V+E  +L   +   
Sbjct: 506 ALIHGLCKAGNMQETLKLLRDMLERGLVFDRITYNTLISGCCKEGKVKEGFELKEEMVKK 565

Query: 433 KFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKA 492
             +  I  FN L+ GLC A ++D A  L+H+  + G VP V TY +MI G C+  K+E+ 
Sbjct: 566 GIQPDIYTFNLLLHGLCNADKIDEASRLWHECKKNGYVPNVYTYGVMIDGYCKANKVEEG 625

Query: 493 NDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKM 534
            + L  +       N V +N+L+  +  N   +    L   M
Sbjct: 626 ENLLNELVSKKLELNSVVYNSLIRAYCINGNMNAAFRLRDDM 667



 Score =  211 bits (538), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 138/490 (28%), Positives = 240/490 (48%), Gaps = 29/490 (5%)

Query: 68  HMQPSPPISSFNLLFGAVAKNRHYDAVISFYRK----------------LVSIGLLPDFL 111
           H + +  ++ FNL+F  V   +  D ++  Y                  L   GL P   
Sbjct: 163 HFEIAQIMADFNLVFEPVIGVKIADLLVHVYSTQFKHLGFGFAADVFSLLAKKGLFPSLK 222

Query: 112 TLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVA 171
           T   L++        L   N +K++  ++  +   G+ PDV  + T+IN FC+      A
Sbjct: 223 TCTFLLS-------SLVKANELKKSYEVYDFICLGGIIPDVHLFSTMINAFCKGHREDDA 275

Query: 172 LRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVC 231
           + L  KM        L    N+ +Y+ II  LCK G +D+A     +M    ++P+++  
Sbjct: 276 IGLFSKM------EKLGVAPNVVTYNNIIHGLCKSGRLDEAYRFKEKMVKEKVSPSLITY 329

Query: 232 TTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQ 291
           +  I+G       +E N +  EM +LG  PN + +N +ID  CK G I+EA  + + M+ 
Sbjct: 330 SVFINGLIKLEKIDEANCVLKEMSELGFVPNEVVYNTLIDGYCKMGNISEALKIRDDMLS 389

Query: 292 RGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEE 351
           +G++P+  T NSL+ G+C   +I  A  +   M  +G      S++++IN  C       
Sbjct: 390 KGISPNSVTLNSLIQGFCKSDQIGQAENVLEEMIGRGLPINQGSFSMVINWLCLKFRFVT 449

Query: 352 AMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILID 411
           A+   R+++   +R       TL+SGL +AG+ G A +L+  +      P++ T N LI 
Sbjct: 450 ALHFIREMLLRNLRPNDGLLTTLVSGLCKAGKQGEAVELWCRLLGKGFVPNIVTSNALIH 509

Query: 412 GLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVP 471
           GLCK   +QE +KL   +      F    +N LI G CK G++   +EL  ++ +KG+ P
Sbjct: 510 GLCKAGNMQETLKLLRDMLERGLVFDRITYNTLISGCCKEGKVKEGFELKEEMVKKGIQP 569

Query: 472 TVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELL 531
            + T+++++HGLC   K+++A+      +KNG  PNV T+  ++ G+ + NK  +   LL
Sbjct: 570 DIYTFNLLLHGLCNADKIDEASRLWHECKKNGYVPNVYTYGVMIDGYCKANKVEEGENLL 629

Query: 532 HKMAEPERNL 541
           +++   +  L
Sbjct: 630 NELVSKKLEL 639



 Score =  151 bits (382), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 97/340 (28%), Positives = 167/340 (49%), Gaps = 13/340 (3%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
           P I + N L   + K  +    +   R ++  GL+ D +T N LI+       G C E +
Sbjct: 499 PNIVTSNALIHGLCKAGNMQETLKLLRDMLERGLVFDRITYNTLIS-------GCCKEGK 551

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
           +KE   L + M+  G++PD+ T+  L++G C    +  A RL  +      +NG +   N
Sbjct: 552 VKEGFELKEEMVKKGIQPDIYTFNLLLHGLCNADKIDEASRLWHEC----KKNGYVP--N 605

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
           +++Y ++ID  CK   V++ + L  E+  + +    VV  +LI  +C  GN      L  
Sbjct: 606 VYTYGVMIDGYCKANKVEEGENLLNELVSKKLELNSVVYNSLIRAYCINGNMNAAFRLRD 665

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
           +M   G   +  T++ ++  LC  G +++A  LL+ M + GL P+   Y +++ GY  +G
Sbjct: 666 DMKSRGVLLSCATYSSLMHGLCNIGLVDDAKHLLDEMRKEGLLPNVVCYTTIIGGYSKLG 725

Query: 313 RIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYN 372
           +++    +   M S        +Y I+I+G+CK+   +EA  L  ++   G+    +TYN
Sbjct: 726 QMNKVNIVLQEMSSHNIHPNKFTYTIMIDGFCKLGKTKEAAKLLNEMTEKGILPDAVTYN 785

Query: 373 TLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDG 412
              +GL + G+   A K+ DEM    V  D  TY  LIDG
Sbjct: 786 AFTNGLCKEGKVEEAFKVCDEMSSGAVCLDEITYTTLIDG 825



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 100/343 (29%), Positives = 161/343 (46%), Gaps = 15/343 (4%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
           N  +H  CK+G  N+ E       M          ++N L     K            ++
Sbjct: 505 NALIHGLCKAG--NMQETLKLLRDMLERGLVFDRITYNTLISGCCKEGKVKEGFELKEEM 562

Query: 102 VSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLING 161
           V  G+ PD  T N+L++       GLC  ++I EA+ L+      G  P+V TYG +I+G
Sbjct: 563 VKKGIQPDIYTFNLLLH-------GLCNADKIDEASRLWHECKKNGYVPNVYTYGVMIDG 615

Query: 162 FCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKG 221
           +C+   +     L  ++VS   E       N   Y+ +I + C  G ++ A  L  +MK 
Sbjct: 616 YCKANKVEEGENLLNELVSKKLE------LNSVVYNSLIRAYCINGNMNAAFRLRDDMKS 669

Query: 222 RGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINE 281
           RG+  +    ++L+HG C  G  ++   L  EM   G  PN++ +  +I    K G++N+
Sbjct: 670 RGVLLSCATYSSLMHGLCNIGLVDDAKHLLDEMRKEGLLPNVVCYTTIIGGYSKLGQMNK 729

Query: 282 ANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILIN 341
            N +L+ M    ++P++FTY  ++DG+C +G+   A ++   M  KG     V+YN   N
Sbjct: 730 VNIVLQEMSSHNIHPNKFTYTIMIDGFCKLGKTKEAAKLLNEMTEKGILPDAVTYNAFTN 789

Query: 342 GYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQA 384
           G CK   VEEA  +  ++ S  V    ITY TL+ G  Q   A
Sbjct: 790 GLCKEGKVEEAFKVCDEMSSGAVCLDEITYTTLIDGCHQPSTA 832


>gi|356529509|ref|XP_003533333.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g12300, mitochondrial-like [Glycine max]
          Length = 450

 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 140/446 (31%), Positives = 233/446 (52%), Gaps = 16/446 (3%)

Query: 90  HYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVR 149
           H +A I   R L+S    P   T +IL N    K +   ++N + +A   F +M+     
Sbjct: 14  HAEAEIGENRALIS----PQ-QTQSILSNLILTKVKPPSIQN-VDDAVSQFNSMLCMRHT 67

Query: 150 PDVITYGTLINGFCRTGNLSVALRL-HKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGL 208
           P VI +  +++ F    + S A+ L H+  + G        + + F+ +I+++  C  G 
Sbjct: 68  PPVIQFNKILDSFAXMKHYSTAVSLSHRLELKG-------IQPDFFTLNILMNCFCHMGQ 120

Query: 209 VDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNV 268
           ++    +  ++  RG  P  +  TTLI G C  G   +      ++L  G + + +++  
Sbjct: 121 INFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQGIKFDQVSYGT 180

Query: 269 MIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKG 328
           +I+ +CK G    A  L+  +  R   P+   YN+++D  C    +  A  +F  M +KG
Sbjct: 181 LINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKG 240

Query: 329 CKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQ 388
               VVSYNI+I G+CK   V+EA++L++++    +  T++TY +L+ GL ++G+  Y  
Sbjct: 241 ISANVVSYNIMIKGFCKSKMVDEALNLFKEMHQKNMVPTIVTYGSLMDGLCKSGRISYVW 300

Query: 389 KLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGL 448
           +L DEM    +  D+ TYN LIDGLCKN  +  A+ LF+  +M    F    F  L+DGL
Sbjct: 301 ELIDEMHDRGIPADVITYNSLIDGLCKNGHLDRAIALFN--KMKDXRFDRLTFTILLDGL 358

Query: 449 CKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNV 508
           CK GRL +A E+F  L  K     V  Y++MI+G C++G LE+A      ME NGC P+ 
Sbjct: 359 CKGGRLKDAQEVFQDLLTKEYDLDVYPYNVMINGYCKQGLLEEALTMRSKMEDNGCIPSA 418

Query: 509 VTFNTLMHGFLQNNKTSKVVELLHKM 534
           VTF  +++   + ++  K  +LLH+M
Sbjct: 419 VTFEIIINALFEKDENDKAEKLLHEM 444



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 140/444 (31%), Positives = 227/444 (51%), Gaps = 20/444 (4%)

Query: 27  SPRQIAAVSSPETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVA 86
           SP+Q  ++ S     N  L +     I N+++A   F  M  M+ +PP+  FN +  + A
Sbjct: 27  SPQQTQSILS-----NLILTKVKPPSIQNVDDAVSQFNSMLCMRHTPPVIQFNKILDSFA 81

Query: 87  KNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAF 146
             +HY   +S   +L   G+ PDF TLNIL+NCF       C   +I     +   ++  
Sbjct: 82  XMKHYSTAVSLSHRLELKGIQPDFFTLNILMNCF-------CHMGQINFGFSVLAKILKR 134

Query: 147 GVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKE 206
           G +P  IT+ TLI G C  G ++ AL  H K+++     G+  K +  SY  +I+ +CK 
Sbjct: 135 GYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLA----QGI--KFDQVSYGTLINGVCKI 188

Query: 207 GLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTF 266
           G    A +L  ++ GR   P V +  T+I   C      E  GLF EM   G   N++++
Sbjct: 189 GDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGISANVVSY 248

Query: 267 NVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHS 326
           N+MI   CK   ++EA  L + M Q+ + P   TY SLMDG C  GRI    E+   MH 
Sbjct: 249 NIMIKGFCKSKMVDEALNLFKEMHQKNMVPTIVTYGSLMDGLCKSGRISYVWELIDEMHD 308

Query: 327 KGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGY 386
           +G    V++YN LI+G CK  +++ A++L+ ++     R   +T+  LL GL + G+   
Sbjct: 309 RGIPADVITYNSLIDGLCKNGHLDRAIALFNKM--KDXRFDRLTFTILLDGLCKGGRLKD 366

Query: 387 AQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLID 446
           AQ++F ++     + D+  YN++I+G CK   ++EA+ +   +E N        F  +I+
Sbjct: 367 AQEVFQDLLTKEYDLDVYPYNVMINGYCKQGLLEEALTMRSKMEDNGCIPSAVTFEIIIN 426

Query: 447 GLCKAGRLDNAWELFHKLPQKGLV 470
            L +    D A +L H++  +GL+
Sbjct: 427 ALFEKDENDKAEKLLHEMIARGLL 450



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 98/333 (29%), Positives = 163/333 (48%), Gaps = 2/333 (0%)

Query: 209 VDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNV 268
           VD A   F  M      P V+    ++  F    ++     L   +   G +P+  T N+
Sbjct: 51  VDDAVSQFNSMLCMRHTPPVIQFNKILDSFAXMKHYSTAVSLSHRLELKGIQPDFFTLNI 110

Query: 269 MIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKG 328
           +++C C  G+IN    +L  +++RG  P   T+ +L+ G CL G+++ A      + ++G
Sbjct: 111 LMNCFCHMGQINFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQG 170

Query: 329 CKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQ 388
            K   VSY  LING CKI +   A+ L R+I     +  V  YNT++  L +      A 
Sbjct: 171 IKFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAY 230

Query: 389 KLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGL 448
            LF EM    +  ++ +YNI+I G CK+  V EA+ LF  +        I  +  L+DGL
Sbjct: 231 GLFSEMTAKGISANVVSYNIMIKGFCKSKMVDEALNLFKEMHQKNMVPTIVTYGSLMDGL 290

Query: 449 CKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNV 508
           CK+GR+   WEL  ++  +G+   V+TY+ +I GLC+ G L++A    L+ +      + 
Sbjct: 291 CKSGRISYVWELIDEMHDRGIPADVITYNSLIDGLCKNGHLDRA--IALFNKMKDXRFDR 348

Query: 509 VTFNTLMHGFLQNNKTSKVVELLHKMAEPERNL 541
           +TF  L+ G  +  +     E+   +   E +L
Sbjct: 349 LTFTILLDGLCKGGRLKDAQEVFQDLLTKEYDL 381



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 90/325 (27%), Positives = 166/325 (51%), Gaps = 4/325 (1%)

Query: 243 NWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYN 302
           N ++    F  ML +   P ++ FN ++D        + A  L   +  +G+ PD FT N
Sbjct: 50  NVDDAVSQFNSMLCMRHTPPVIQFNKILDSFAXMKHYSTAVSLSHRLELKGIQPDFFTLN 109

Query: 303 SLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISN 362
            LM+ +C +G+I+    +   +  +G +   +++  LI G C    V +A+  + ++++ 
Sbjct: 110 ILMNCFCHMGQINFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQ 169

Query: 363 GVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEA 422
           G++   ++Y TL++G+ + G    A KL  ++     +P++  YN +ID LCK   V EA
Sbjct: 170 GIKFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEA 229

Query: 423 VKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHG 482
             LF  +        +  +N +I G CK+  +D A  LF ++ QK +VPT+VTY  ++ G
Sbjct: 230 YGLFSEMTAKGISANVVSYNIMIKGFCKSKMVDEALNLFKEMHQKNMVPTIVTYGSLMDG 289

Query: 483 LCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLV 542
           LC+ G++    + +  M   G   +V+T+N+L+ G  +N    + + L +KM +      
Sbjct: 290 LCKSGRISYVWELIDEMHDRGIPADVITYNSLIDGLCKNGHLDRAIALFNKMKDXRF--- 346

Query: 543 PDDTTFSIVVDLLAKDEKYHECSAV 567
            D  TF+I++D L K  +  +   V
Sbjct: 347 -DRLTFTILLDGLCKGGRLKDAQEV 370


>gi|359482689|ref|XP_003632809.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Vitis vinifera]
          Length = 879

 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 133/446 (29%), Positives = 225/446 (50%), Gaps = 36/446 (8%)

Query: 105 GLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCR 164
           G +P+ +  N LI+       G C +  ++ A  LF  +   G  P V TYG +INGFC+
Sbjct: 234 GCIPNIIFYNTLID-------GYCKKGDMEMANGLFIELKLKGFLPTVETYGAIINGFCK 286

Query: 165 TGN---------------LSVALRLHKKMVSGDYENGLISKT--------------NIFS 195
            G+               L+V ++++  ++   Y++G I K               +I +
Sbjct: 287 KGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAVETIEGMIECGCKPDIVT 346

Query: 196 YSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEML 255
           Y+ +I   C++G V +A +L  +  G+G+ P     T LIH +C  G ++  +   IEM 
Sbjct: 347 YNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASNWLIEMT 406

Query: 256 DLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRID 315
           + G +P+L+T+  ++  L   G+++ A  + E M++RG+ PD   YN LM G C   ++ 
Sbjct: 407 ERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFPDAGIYNILMSGLCKKFKLP 466

Query: 316 TAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLL 375
            A+ +   M  +        Y  L++G+ +  N++EA  L+   I  G+   ++ YN ++
Sbjct: 467 AAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFELTIEKGMNPGIVGYNAMI 526

Query: 376 SGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFE 435
            G  + G    A    + MK  ++ PD  TY+ +IDG  K + +  A K+F  +   K +
Sbjct: 527 KGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQHDLDGAQKMFREMVKMKCK 586

Query: 436 FGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDF 495
             +  +  LI+G C+ G L  + ++F ++   GLVP VVTYSI+I   C++ KL  A  F
Sbjct: 587 PNVVTYTSLINGFCRKGDLHRSLKIFREMQACGLVPNVVTYSILIGSFCKEAKLIDAASF 646

Query: 496 LLYMEKNGCAPNVVTFNTLMHGFLQN 521
              M  N C PN VTFN L++GF +N
Sbjct: 647 FEEMLMNKCVPNDVTFNYLVNGFSKN 672



 Score =  208 bits (529), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 151/542 (27%), Positives = 245/542 (45%), Gaps = 52/542 (9%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CK G   L E R            P I  +N L     K    +     + +L   G LP
Sbjct: 215 CKEG--KLEEGRKLIEDRWGQGCIPNIIFYNTLIDGYCKKGDMEMANGLFIELKLKGFLP 272

Query: 109 DFLTLNILINCFGNK--------------ERGLCV--------------ENRIKEATWLF 140
              T   +IN F  K               RGL V                 I +A    
Sbjct: 273 TVETYGAIINGFCKKGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAVETI 332

Query: 141 KNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIII 200
           + MI  G +PD++TY TLI+G CR G +S A +L ++ +      GL+   N FSY+ +I
Sbjct: 333 EGMIECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQALG----KGLMP--NKFSYTPLI 386

Query: 201 DSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPR 260
            + CK+G  D+A    +EM  RG  P +V    L+HG   AG  +    +  +ML+ G  
Sbjct: 387 HAYCKQGGYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVF 446

Query: 261 PNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREI 320
           P+   +N+++  LCK  K+  A  LL  M+ + + PD F Y +L+DG+   G +D AR++
Sbjct: 447 PDAGIYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKL 506

Query: 321 FLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQ 380
           F     KG    +V YN +I GYCK   +++AM+   ++    +     TY+T++ G  +
Sbjct: 507 FELTIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGYVK 566

Query: 381 AGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEI 440
                 AQK+F EM     +P++ TY  LI+G C+   +  ++K+F  ++       +  
Sbjct: 567 QHDLDGAQKMFREMVKMKCKPNVVTYTSLINGFCRKGDLHRSLKIFREMQACGLVPNVVT 626

Query: 441 FNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKL---EKAND--- 494
           ++ LI   CK  +L +A   F ++     VP  VT++ +++G  + G     EK N+   
Sbjct: 627 YSILIGSFCKEAKLIDAASFFEEMLMNKCVPNDVTFNYLVNGFSKNGTRAISEKGNEFQE 686

Query: 495 --------FLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDT 546
                   F   M  +G AP    +N+++    Q       ++L +KM    +  +PD  
Sbjct: 687 NKQSMFLNFFGRMISDGWAPRSAAYNSILICLCQYGMFRTALQLSNKMT--SKGCIPDSV 744

Query: 547 TF 548
           +F
Sbjct: 745 SF 746



 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 155/571 (27%), Positives = 255/571 (44%), Gaps = 82/571 (14%)

Query: 62  FFGYMTHMQPSPPISSF--NLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINC 119
           FF +++  Q S PI+ F  + L   +A++R +  +      +    + P    ++I+I  
Sbjct: 79  FFDWVSRGQYSGPINGFAYSSLLKLLARSRVFSEMEVVLENMRVEEMSPTREAMSIVIQA 138

Query: 120 FGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMV 179
           + +   GL VE  ++   ++ K    F   PDVI   +L+N   + G + +A +L+ +M+
Sbjct: 139 YSDS--GL-VEKALELYYFVLKTYTYF---PDVIACNSLLNMLVKLGRIEIARKLYDEML 192

Query: 180 SGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFC 239
             D         + +S  I++  LCKEG +++ ++L  +  G+G  P ++   TLI G+C
Sbjct: 193 EIDGAGDRC--VDNYSTCIMVKGLCKEGKLEEGRKLIEDRWGQGCIPNIIFYNTLIDGYC 250

Query: 240 CAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRF 299
             G+ E  NGLFIE+   G  P + T+  +I+  CK G     + LL  M  RGL  +  
Sbjct: 251 KKGDMEMANGLFIELKLKGFLPTVETYGAIINGFCKKGDFKAIDRLLMEMNSRGLTVNVQ 310

Query: 300 TYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQI 359
            YN+++D     G I  A E    M   GCK  +V+YN LI+G C+   V EA  L  Q 
Sbjct: 311 VYNTIIDARYKHGHIVKAVETIEGMIECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQA 370

Query: 360 ISNGV-----------------------------------RQTVITYNTLLSGLFQAGQA 384
           +  G+                                   +  ++TY  L+ GL  AG+ 
Sbjct: 371 LGKGLMPNKFSYTPLIHAYCKQGGYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEV 430

Query: 385 GYAQKLFDEMKLYNVEPDLSTYNILIDGLCK----------------------------- 415
             A  + ++M    V PD   YNIL+ GLCK                             
Sbjct: 431 DVALTIREKMLERGVFPDAGIYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATL 490

Query: 416 ------NNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGL 469
                 N  + EA KLF +        GI  +N +I G CK G + +A    +++ ++ L
Sbjct: 491 VDGFIRNGNLDEARKLFELTIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHL 550

Query: 470 VPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVE 529
            P   TYS +I G  ++  L+ A      M K  C PNVVT+ +L++GF +     + ++
Sbjct: 551 APDEFTYSTVIDGYVKQHDLDGAQKMFREMVKMKCKPNVVTYTSLINGFCRKGDLHRSLK 610

Query: 530 LLHKMAEPERNLVPDDTTFSIVVDLLAKDEK 560
           +  +M      LVP+  T+SI++    K+ K
Sbjct: 611 IFREMQAC--GLVPNVVTYSILIGSFCKEAK 639



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 128/456 (28%), Positives = 224/456 (49%), Gaps = 39/456 (8%)

Query: 58  EARYFFGYMTHMQPS----------PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLL 107
           +ARY  G++     +          P I ++N L     ++           + +  GL+
Sbjct: 317 DARYKHGHIVKAVETIEGMIECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLM 376

Query: 108 PDFLTLNILINCFGNKERGLCVENRIKEAT-WLFKNMIAFGVRPDVITYGTLINGFCRTG 166
           P+  +   LI+ +       C +     A+ WL + M   G +PD++TYG L++G    G
Sbjct: 377 PNKFSYTPLIHAY-------CKQGGYDRASNWLIE-MTERGHKPDLVTYGALVHGLVVAG 428

Query: 167 NLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINP 226
            + VAL + +KM+    E G+     I  Y+I++  LCK+  +  AK L  EM  + + P
Sbjct: 429 EVDVALTIREKML----ERGVFPDAGI--YNILMSGLCKKFKLPAAKLLLAEMLDQSVLP 482

Query: 227 AVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLL 286
              V  TL+ GF   GN +E   LF   ++ G  P ++ +N MI   CK G + +A   +
Sbjct: 483 DAFVYATLVDGFIRNGNLDEARKLFELTIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACI 542

Query: 287 ELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKI 346
             M +R L PD FTY++++DGY     +D A+++F  M    CK  VV+Y  LING+C+ 
Sbjct: 543 NRMKKRHLAPDEFTYSTVIDGYVKQHDLDGAQKMFREMVKMKCKPNVVTYTSLINGFCRK 602

Query: 347 LNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTY 406
            ++  ++ ++R++ + G+   V+TY+ L+    +  +   A   F+EM +    P+  T+
Sbjct: 603 GDLHRSLKIFREMQACGLVPNVVTYSILIGSFCKEAKLIDAASFFEEMLMNKCVPNDVTF 662

Query: 407 NILIDGLCKN--NCVQEAVKLFHMLEMNKFE--FGIEI----------FNCLIDGLCKAG 452
           N L++G  KN    + E    F   + + F   FG  I          +N ++  LC+ G
Sbjct: 663 NYLVNGFSKNGTRAISEKGNEFQENKQSMFLNFFGRMISDGWAPRSAAYNSILICLCQYG 722

Query: 453 RLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGK 488
               A +L +K+  KG +P  V++  ++HG+C +G+
Sbjct: 723 MFRTALQLSNKMTSKGCIPDSVSFVALLHGVCLEGR 758



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 92/359 (25%), Positives = 156/359 (43%), Gaps = 36/359 (10%)

Query: 8   RCLFSSETVSKVKLSSL---FKSPRQ---IAAVSSPETQLNEFLHENCKSGII---NLNE 58
           R +F    +  + +S L   FK P     +A +       + F++     G I   NL+E
Sbjct: 443 RGVFPDAGIYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDE 502

Query: 59  ARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILIN 118
           AR  F        +P I  +N +     K       ++   ++    L PD  T + +I+
Sbjct: 503 ARKLFELTIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVID 562

Query: 119 CFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKM 178
                  G   ++ +  A  +F+ M+    +P+V+TY +LINGFCR G+L  +L++ ++M
Sbjct: 563 -------GYVKQHDLDGAQKMFREMVKMKCKPNVVTYTSLINGFCRKGDLHRSLKIFREM 615

Query: 179 VSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGF 238
            +     GL+   N+ +YSI+I S CKE  +  A   F EM      P  V    L++GF
Sbjct: 616 QAC----GLVP--NVVTYSILIGSFCKEAKLIDAASFFEEMLMNKCVPNDVTFNYLVNGF 669

Query: 239 CCAGN----------WEEVNGLFI----EMLDLGPRPNLLTFNVMIDCLCKGGKINEANG 284
              G            E    +F+     M+  G  P    +N ++ CLC+ G    A  
Sbjct: 670 SKNGTRAISEKGNEFQENKQSMFLNFFGRMISDGWAPRSAAYNSILICLCQYGMFRTALQ 729

Query: 285 LLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGY 343
           L   M  +G  PD  ++ +L+ G CL GR    + I     ++      V+Y+ +++ Y
Sbjct: 730 LSNKMTSKGCIPDSVSFVALLHGVCLEGRSKEWKNIVSCNLNERELQIAVNYSSILDQY 788


>gi|224054827|ref|XP_002298371.1| predicted protein [Populus trichocarpa]
 gi|222845629|gb|EEE83176.1| predicted protein [Populus trichocarpa]
          Length = 915

 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 146/484 (30%), Positives = 238/484 (49%), Gaps = 24/484 (4%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
           P +  +N L  ++ K+  +D     ++++   GL  + +T +ILI+ F       C   +
Sbjct: 364 PSLFVYNALINSLCKDGKFDEAELLFKEMGEKGLCANDVTYSILIDSF-------CRRGK 416

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
           +  A      MI  G++  V  Y +LING C+ GNLS A+    +M+    + GL  K  
Sbjct: 417 LDTAIHFLGKMIMAGIKITVYPYNSLINGHCKLGNLSAAVSFFDEMI----DKGL--KPT 470

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
           + SY+ +I   C +G + +A  L+ EM G+GI P     TTLI     A    +   LF 
Sbjct: 471 VVSYTSLISGYCNKGKLHEAFRLYHEMTGKGIAPNTYTFTTLISALFRANRMTDAFRLFD 530

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
           EML+    PN +T+NVMI+  CK G   +A  LL  M+Q+GL PD +TY  L+   C  G
Sbjct: 531 EMLEQNMMPNEVTYNVMIEGHCKEGNTVKAFELLNQMVQKGLVPDTYTYRPLISSLCSTG 590

Query: 313 RIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYN 372
           R+  A++    +H +  K   + Y+ L++GYCK   + +A+ + R+++  GV   ++ Y 
Sbjct: 591 RVCEAKKFIDDLHREHFKLNEMCYSALLHGYCKEGRLRDALGVCREMVKRGVDMDLVCYA 650

Query: 373 TLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMN 432
            L+ G  +         L   M    + PD   Y  +IDG  K   V++A  ++ ++   
Sbjct: 651 VLIDGTIKEQDTSAVFGLLKNMHDQRLRPDKVIYTSMIDGYSKAGSVKKAFGIWDIMIDE 710

Query: 433 KFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKA 492
                I  +  LI+ LCKAG +D A  L+ ++      P  VTY   +  L R+G +EKA
Sbjct: 711 GCTPNIVTYTTLINELCKAGLMDKAELLWKEMLVSNSTPNHVTYCCFLDHLAREGSMEKA 770

Query: 493 ----NDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTF 548
               ND L      G   N V++N L+ GF +  +  +  +LL +M   +  + PD  T+
Sbjct: 771 VQLHNDML-----KGLLANTVSYNILVRGFCKLGRVEEATKLLDEMI--DNAIFPDCITY 823

Query: 549 SIVV 552
           S ++
Sbjct: 824 STII 827



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 154/533 (28%), Positives = 251/533 (47%), Gaps = 39/533 (7%)

Query: 56  LNEARYF-----FGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDF 110
           + E R F     F  M   +  P + +   +   +AK R  D V+  + +++S+G+ PD 
Sbjct: 169 VQEKRMFDSVLIFRLMRQCELMPQVRTLGEVLNGLAKIRRVDMVLVLFGEILSMGIRPDI 228

Query: 111 LTLNILINCF-------GNKE-------------------RGLCVENRIKEATWLFKNMI 144
                +I  F         KE                    GLC   R+ EA  +   +I
Sbjct: 229 YIYVAVIRSFCELKNFAKAKEMIQRMESSDLNVVVYNVLIHGLCKNKRVWEAVEIKNGLI 288

Query: 145 AFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLC 204
             G+    +TY TL+ G C+     V   +  +M+    E G +      + S +++ L 
Sbjct: 289 QKGLTASEVTYCTLVLGLCKVQEFEVGAGVMDEMI----ELGFVPTEA--ALSSLVEGLR 342

Query: 205 KEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLL 264
           ++G V  A +L   +K  G  P++ V   LI+  C  G ++E   LF EM + G   N +
Sbjct: 343 RKGKVVDAFDLVNRVKKVGAMPSLFVYNALINSLCKDGKFDEAELLFKEMGEKGLCANDV 402

Query: 265 TFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSM 324
           T++++ID  C+ GK++ A   L  MI  G+    + YNSL++G+C +G +  A   F  M
Sbjct: 403 TYSILIDSFCRRGKLDTAIHFLGKMIMAGIKITVYPYNSLINGHCKLGNLSAAVSFFDEM 462

Query: 325 HSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQA 384
             KG K TVVSY  LI+GYC    + EA  LY ++   G+     T+ TL+S LF+A + 
Sbjct: 463 IDKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTGKGIAPNTYTFTTLISALFRANRM 522

Query: 385 GYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCL 444
             A +LFDEM   N+ P+  TYN++I+G CK     +A +L + +           +  L
Sbjct: 523 TDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVKAFELLNQMVQKGLVPDTYTYRPL 582

Query: 445 IDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGC 504
           I  LC  GR+  A +    L ++      + YS ++HG C++G+L  A      M K G 
Sbjct: 583 ISSLCSTGRVCEAKKFIDDLHREHFKLNEMCYSALLHGYCKEGRLRDALGVCREMVKRGV 642

Query: 505 APNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAK 557
             ++V +  L+ G ++   TS V  LL  M   ++ L PD   ++ ++D  +K
Sbjct: 643 DMDLVCYAVLIDGTIKEQDTSAVFGLLKNMH--DQRLRPDKVIYTSMIDGYSK 693



 Score =  201 bits (512), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 140/476 (29%), Positives = 225/476 (47%), Gaps = 16/476 (3%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
           N  ++ +CK G  NL+ A  FF  M      P + S+  L                Y ++
Sbjct: 440 NSLINGHCKLG--NLSAAVSFFDEMIDKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEM 497

Query: 102 VSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLING 161
              G+ P+  T   LI+        L   NR+ +A  LF  M+   + P+ +TY  +I G
Sbjct: 498 TGKGIAPNTYTFTTLIS-------ALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEG 550

Query: 162 FCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKG 221
            C+ GN   A  L  +MV    + GL+  T  ++Y  +I SLC  G V +AK+   ++  
Sbjct: 551 HCKEGNTVKAFELLNQMV----QKGLVPDT--YTYRPLISSLCSTGRVCEAKKFIDDLHR 604

Query: 222 RGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINE 281
                  +  + L+HG+C  G   +  G+  EM+  G   +L+ + V+ID   K    + 
Sbjct: 605 EHFKLNEMCYSALLHGYCKEGRLRDALGVCREMVKRGVDMDLVCYAVLIDGTIKEQDTSA 664

Query: 282 ANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILIN 341
             GLL+ M  + L PD+  Y S++DGY   G +  A  I+  M  +GC   +V+Y  LIN
Sbjct: 665 VFGLLKNMHDQRLRPDKVIYTSMIDGYSKAGSVKKAFGIWDIMIDEGCTPNIVTYTTLIN 724

Query: 342 GYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEP 401
             CK   +++A  L+++++ +      +TY   L  L + G    A +L ++M L  +  
Sbjct: 725 ELCKAGLMDKAELLWKEMLVSNSTPNHVTYCCFLDHLAREGSMEKAVQLHNDM-LKGLLA 783

Query: 402 DLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELF 461
           +  +YNIL+ G CK   V+EA KL   +  N        ++ +I   C+ G LD A E +
Sbjct: 784 NTVSYNILVRGFCKLGRVEEATKLLDEMIDNAIFPDCITYSTIIYQCCRRGNLDGAIEFW 843

Query: 462 HKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHG 517
             +  KGL P  + Y+ +I+G C  G+L KA +    M + G  PN  T  +L HG
Sbjct: 844 DTMLNKGLKPDTLAYNFLIYGCCIAGELGKAFELRDDMIRRGVKPNQATHKSLSHG 899



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 151/584 (25%), Positives = 261/584 (44%), Gaps = 94/584 (16%)

Query: 59  ARYFFGYM-THMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILI 117
           A  FF ++  H   +    SF +L  A+     +    S  + L+  G L        L+
Sbjct: 88  ALRFFNFLGLHKNFNHSTMSFCILIHALVNANLFWPASSLLQTLLLRGGLDPREVFEALL 147

Query: 118 NCFGNKE-----------RGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLING----- 161
           +CF   +           +    E R+ ++  +F+ M    + P V T G ++NG     
Sbjct: 148 DCFEKCDFISSLGFDLLIQSYVQEKRMFDSVLIFRLMRQCELMPQVRTLGEVLNGLAKIR 207

Query: 162 ------------------------------FCRTGNLSVALRLHKKMVSGDYENGLISKT 191
                                         FC   N + A  + ++M S D         
Sbjct: 208 RVDMVLVLFGEILSMGIRPDIYIYVAVIRSFCELKNFAKAKEMIQRMESSDL-------- 259

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
           N+  Y+++I  LCK   V +A E+   +  +G+  + V   TL+ G C    +E   G+ 
Sbjct: 260 NVVVYNVLIHGLCKNKRVWEAVEIKNGLIQKGLTASEVTYCTLVLGLCKVQEFEVGAGVM 319

Query: 252 IEMLDLG-----------------------------------PRPNLLTFNVMIDCLCKG 276
            EM++LG                                     P+L  +N +I+ LCK 
Sbjct: 320 DEMIELGFVPTEAALSSLVEGLRRKGKVVDAFDLVNRVKKVGAMPSLFVYNALINSLCKD 379

Query: 277 GKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSY 336
           GK +EA  L + M ++GL  +  TY+ L+D +C  G++DTA      M   G K TV  Y
Sbjct: 380 GKFDEAELLFKEMGEKGLCANDVTYSILIDSFCRRGKLDTAIHFLGKMIMAGIKITVYPY 439

Query: 337 NILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKL 396
           N LING+CK+ N+  A+S + ++I  G++ TV++Y +L+SG    G+   A +L+ EM  
Sbjct: 440 NSLINGHCKLGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTG 499

Query: 397 YNVEPDLSTYNILIDGLCKNNCVQEAVKLF-HMLEMNKFEFGIEIFNCLIDGLCKAGRLD 455
             + P+  T+  LI  L + N + +A +LF  MLE N     +  +N +I+G CK G   
Sbjct: 500 KGIAPNTYTFTTLISALFRANRMTDAFRLFDEMLEQNMMPNEV-TYNVMIEGHCKEGNTV 558

Query: 456 NAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLM 515
            A+EL +++ QKGLVP   TY  +I  LC  G++ +A  F+  + +     N + ++ L+
Sbjct: 559 KAFELLNQMVQKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDDLHREHFKLNEMCYSALL 618

Query: 516 HGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDE 559
           HG+ +  +    + +  +M   +R +  D   +++++D   K++
Sbjct: 619 HGYCKEGRLRDALGVCREMV--KRGVDMDLVCYAVLIDGTIKEQ 660



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 84/342 (24%), Positives = 157/342 (45%), Gaps = 24/342 (7%)

Query: 264 LTFNVMIDCLCKGGKINEANGLLE-LMIQRGLNPDRFTYNSLMD---------------- 306
           ++F ++I  L        A+ LL+ L+++ GL+P R  + +L+D                
Sbjct: 106 MSFCILIHALVNANLFWPASSLLQTLLLRGGLDP-REVFEALLDCFEKCDFISSLGFDLL 164

Query: 307 --GYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGV 364
              Y    R+  +  IF  M        V +   ++NG  KI  V+  + L+ +I+S G+
Sbjct: 165 IQSYVQEKRMFDSVLIFRLMRQCELMPQVRTLGEVLNGLAKIRRVDMVLVLFGEILSMGI 224

Query: 365 RQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVK 424
           R  +  Y  ++    +      A+++   M+  + + ++  YN+LI GLCKN  V EAV+
Sbjct: 225 RPDIYIYVAVIRSFCELKNFAKAKEMIQRME--SSDLNVVVYNVLIHGLCKNKRVWEAVE 282

Query: 425 LFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLC 484
           + + L           +  L+ GLCK    +    +  ++ + G VPT    S ++ GL 
Sbjct: 283 IKNGLIQKGLTASEVTYCTLVLGLCKVQEFEVGAGVMDEMIELGFVPTEAALSSLVEGLR 342

Query: 485 RKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPD 544
           RKGK+  A D +  ++K G  P++  +N L++   ++ K  +   L  +M E  + L  +
Sbjct: 343 RKGKVVDAFDLVNRVKKVGAMPSLFVYNALINSLCKDGKFDEAELLFKEMGE--KGLCAN 400

Query: 545 DTTFSIVVDLLAKDEKYHECSAVSKSSYRACLYVTIFQPSSL 586
           D T+SI++D   +  K             A + +T++  +SL
Sbjct: 401 DVTYSILIDSFCRRGKLDTAIHFLGKMIMAGIKITVYPYNSL 442



 Score = 43.9 bits (102), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 32/121 (26%), Positives = 54/121 (44%), Gaps = 9/121 (7%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CK G   + EA      M      P   +++ +     +  + D  I F+  +++ GL P
Sbjct: 796 CKLG--RVEEATKLLDEMIDNAIFPDCITYSTIIYQCCRRGNLDGAIEFWDTMLNKGLKP 853

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           D L  N LI        G C+   + +A  L  +MI  GV+P+  T+ +L +G  R  ++
Sbjct: 854 DTLAYNFLI-------YGCCIAGELGKAFELRDDMIRRGVKPNQATHKSLSHGASRKFSI 906

Query: 169 S 169
           S
Sbjct: 907 S 907


>gi|357460285|ref|XP_003600424.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355489472|gb|AES70675.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 393

 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 127/383 (33%), Positives = 206/383 (53%), Gaps = 18/383 (4%)

Query: 159 INGFCRTGNLSVALRLHKKMVSGDYE----NGLISKTNIFSYSIIIDSLCKEGLVDKAKE 214
           + G C  G +  AL  H  +++  +       L+ K ++  Y+ IID LCK+ LV    +
Sbjct: 1   MKGLCLNGEVRKALYFHDHVIAKGFHLNHIERLLVKPDVVMYNTIIDILCKDKLVSDGCD 60

Query: 215 LFLEMKGRGINPAVVVCTTLIH--------------GFCCAGNWEEVNGLFIEMLDLGPR 260
           L+ EM  + I P VV   TLI+              GF   G  +E  GL  +M      
Sbjct: 61  LYSEMIDKKIYPDVVTYNTLIYSLLNFVYIKIRKEYGFSILGQMKEAVGLLNQMTSKTVT 120

Query: 261 PNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREI 320
           PN+ TF  ++D LCK G++ +A  +L +MI++ + P+  TYNSLMDGY LV  ++ A+++
Sbjct: 121 PNIRTFTTLVDGLCKDGEVKKARNVLAIMIKQRVEPNIVTYNSLMDGYFLVKEVNKAKQL 180

Query: 321 FLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQ 380
           F ++  +G    V SY ++ING CK   V+EA +L++++ S  +    + YN+L+ GL +
Sbjct: 181 FNTISLRGMTPNVRSYKVMINGLCKNKMVDEAANLFKEMHSKNMVPDTVAYNSLIDGLCK 240

Query: 381 AGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEI 440
           + +         EM       ++ TYN L+DGLCKN+ V +A+ L   ++       I  
Sbjct: 241 SRRIYDVWDFIGEMHDRGQPANIITYNSLLDGLCKNHQVDKAITLLTKIKNQGIRPNIYT 300

Query: 441 FNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYME 500
           +  L+DGLCK GRL +A E++  L  KG       Y++MI+GLC++G L++A   L  ME
Sbjct: 301 YTILVDGLCKNGRLRDAQEVYQDLLNKGYQLDARIYTVMINGLCKEGFLDEALSLLSKME 360

Query: 501 KNGCAPNVVTFNTLMHGFLQNNK 523
            N C P+ VT+   +    ++++
Sbjct: 361 DNKCTPDGVTYEITIRALFESDR 383



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 89/331 (26%), Positives = 169/331 (51%), Gaps = 17/331 (5%)

Query: 260 RPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMD------------- 306
           +P+++ +N +ID LCK   +++   L   MI + + PD  TYN+L+              
Sbjct: 36  KPDVVMYNTIIDILCKDKLVSDGCDLYSEMIDKKIYPDVVTYNTLIYSLLNFVYIKIRKE 95

Query: 307 -GYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVR 365
            G+ ++G++  A  +   M SK     + ++  L++G CK   V++A ++   +I   V 
Sbjct: 96  YGFSILGQMKEAVGLLNQMTSKTVTPNIRTFTTLVDGLCKDGEVKKARNVLAIMIKQRVE 155

Query: 366 QTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKL 425
             ++TYN+L+ G F   +   A++LF+ + L  + P++ +Y ++I+GLCKN  V EA  L
Sbjct: 156 PNIVTYNSLMDGYFLVKEVNKAKQLFNTISLRGMTPNVRSYKVMINGLCKNKMVDEAANL 215

Query: 426 FHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCR 485
           F  +           +N LIDGLCK+ R+ + W+   ++  +G    ++TY+ ++ GLC+
Sbjct: 216 FKEMHSKNMVPDTVAYNSLIDGLCKSRRIYDVWDFIGEMHDRGQPANIITYNSLLDGLCK 275

Query: 486 KGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDD 545
             +++KA   L  ++  G  PN+ T+  L+ G  +N +     E+   +      L  D 
Sbjct: 276 NHQVDKAITLLTKIKNQGIRPNIYTYTILVDGLCKNGRLRDAQEVYQDLLNKGYQL--DA 333

Query: 546 TTFSIVVDLLAKDEKYHEC-SAVSKSSYRAC 575
             ++++++ L K+    E  S +SK     C
Sbjct: 334 RIYTVMINGLCKEGFLDEALSLLSKMEDNKC 364



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 94/359 (26%), Positives = 170/359 (47%), Gaps = 36/359 (10%)

Query: 61  YFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCF 120
           +   ++  +   P +  +N +   + K++        Y +++   + PD +T N LI   
Sbjct: 25  FHLNHIERLLVKPDVVMYNTIIDILCKDKLVSDGCDLYSEMIDKKIYPDVVTYNTLIYSL 84

Query: 121 GN-------KERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALR 173
            N       KE G  +  ++KEA  L   M +  V P++ T+ TL++G C+ G +  A  
Sbjct: 85  LNFVYIKIRKEYGFSILGQMKEAVGLLNQMTSKTVTPNIRTFTTLVDGLCKDGEVKKARN 144

Query: 174 LHKKMVSGDYENGLIS-----------------------------KTNIFSYSIIIDSLC 204
           +   M+    E  +++                               N+ SY ++I+ LC
Sbjct: 145 VLAIMIKQRVEPNIVTYNSLMDGYFLVKEVNKAKQLFNTISLRGMTPNVRSYKVMINGLC 204

Query: 205 KEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLL 264
           K  +VD+A  LF EM  + + P  V   +LI G C +    +V     EM D G   N++
Sbjct: 205 KNKMVDEAANLFKEMHSKNMVPDTVAYNSLIDGLCKSRRIYDVWDFIGEMHDRGQPANII 264

Query: 265 TFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSM 324
           T+N ++D LCK  ++++A  LL  +  +G+ P+ +TY  L+DG C  GR+  A+E++  +
Sbjct: 265 TYNSLLDGLCKNHQVDKAITLLTKIKNQGIRPNIYTYTILVDGLCKNGRLRDAQEVYQDL 324

Query: 325 HSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQ 383
            +KG +     Y ++ING CK   ++EA+SL  ++  N      +TY   +  LF++ +
Sbjct: 325 LNKGYQLDARIYTVMINGLCKEGFLDEALSLLSKMEDNKCTPDGVTYEITIRALFESDR 383



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 56/223 (25%), Positives = 113/223 (50%), Gaps = 13/223 (5%)

Query: 56  LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNI 115
           +N+A+  F  ++    +P + S+ ++   + KN+  D   + ++++ S  ++PD +  N 
Sbjct: 174 VNKAKQLFNTISLRGMTPNVRSYKVMINGLCKNKMVDEAANLFKEMHSKNMVPDTVAYNS 233

Query: 116 LINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLH 175
           LI+       GLC   RI +       M   G   ++ITY +L++G C+   +  A+ L 
Sbjct: 234 LID-------GLCKSRRIYDVWDFIGEMHDRGQPANIITYNSLLDGLCKNHQVDKAITLL 286

Query: 176 KKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLI 235
            K+ +     G+  + NI++Y+I++D LCK G +  A+E++ ++  +G      + T +I
Sbjct: 287 TKIKN----QGI--RPNIYTYTILVDGLCKNGRLRDAQEVYQDLLNKGYQLDARIYTVMI 340

Query: 236 HGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGK 278
           +G C  G  +E   L  +M D    P+ +T+ + I  L +  +
Sbjct: 341 NGLCKEGFLDEALSLLSKMEDNKCTPDGVTYEITIRALFESDR 383


>gi|449469290|ref|XP_004152354.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Cucumis sativus]
 gi|449484425|ref|XP_004156880.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Cucumis sativus]
          Length = 834

 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 141/492 (28%), Positives = 245/492 (49%), Gaps = 19/492 (3%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIG----LLPDFLTLNILINCFGNKERGLC 128
           P   + N L   + K+R  +     Y +++       +  D  T +I++       +GLC
Sbjct: 167 PSTYACNSLLNLLVKHRRIETAHQLYDEMIDRDNGDDICVDNYTTSIMV-------KGLC 219

Query: 129 VENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLI 188
           ++ RI++   L ++    G  P+++ Y TLI+G+C+ G +  A +L KK+       G I
Sbjct: 220 LKGRIEDGIKLIESRWGKGCVPNIVFYNTLIDGYCKKGEVESAYKLFKKLKM----KGFI 275

Query: 189 SKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVN 248
                F    +++  CK G+ +    L LEMK RG++  V +   +I      G   +  
Sbjct: 276 PTLQTFGS--LVNGFCKMGMFEAIDLLLLEMKDRGLSVNVQMYNNIIDARYKLGFDIKAK 333

Query: 249 GLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGY 308
               EM +    P+L+T+N +I+  C  G++ EA  LLE  I+RGL P++ TY  L+ GY
Sbjct: 334 DTLKEMSENCCEPDLVTYNTLINHFCSRGEVEEAEKLLEQTIRRGLAPNKLTYTPLVHGY 393

Query: 309 CLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTV 368
           C  G    A +  + M + G +  ++SY  LI+G      V+ A+++  ++++ G+    
Sbjct: 394 CKQGEYTKATDYLIEMSTSGLEVDMISYGALIHGLVVAGEVDTALTIRDRMMNRGILPDA 453

Query: 369 ITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHM 428
             YN L++GLF+ G+   A+ +  EM   N+ PD   Y  L+DG  ++  + EA KLF +
Sbjct: 454 NIYNVLMNGLFKKGKLSMAKVMLTEMLDQNIAPDAFVYATLVDGFIRHGNLDEAKKLFQL 513

Query: 429 LEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGK 488
           +     + G+  +N +I G  K+G +DNA     K+ +   VP + T+S +I G  ++  
Sbjct: 514 IIEKGLDPGVVGYNVMIKGFSKSGMMDNAILCIDKMRRAHHVPDIFTFSTIIDGYVKQHN 573

Query: 489 LEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTF 548
           +         M K  C PNVVT+ +L++G+ +  +T K+ E L  M      L P   T+
Sbjct: 574 MNAVLKIFGLMVKQNCKPNVVTYTSLINGYCRKGET-KMAEKLFSMMR-SHGLKPSVVTY 631

Query: 549 SIVVDLLAKDEK 560
           SI++    K+ K
Sbjct: 632 SILIGSFCKEAK 643



 Score =  211 bits (538), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 129/469 (27%), Positives = 232/469 (49%), Gaps = 37/469 (7%)

Query: 105 GLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCR 164
           G +P+ +  N LI+       G C +  ++ A  LFK +   G  P + T+G+L+NGFC+
Sbjct: 238 GCVPNIVFYNTLID-------GYCKKGEVESAYKLFKKLKMKGFIPTLQTFGSLVNGFCK 290

Query: 165 TG---------------NLSVALRLHKKMVSGDYENGLISKT--------------NIFS 195
            G                LSV ++++  ++   Y+ G   K               ++ +
Sbjct: 291 MGMFEAIDLLLLEMKDRGLSVNVQMYNNIIDARYKLGFDIKAKDTLKEMSENCCEPDLVT 350

Query: 196 YSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEML 255
           Y+ +I+  C  G V++A++L  +   RG+ P  +  T L+HG+C  G + +     IEM 
Sbjct: 351 YNTLINHFCSRGEVEEAEKLLEQTIRRGLAPNKLTYTPLVHGYCKQGEYTKATDYLIEMS 410

Query: 256 DLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRID 315
             G   +++++  +I  L   G+++ A  + + M+ RG+ PD   YN LM+G    G++ 
Sbjct: 411 TSGLEVDMISYGALIHGLVVAGEVDTALTIRDRMMNRGILPDANIYNVLMNGLFKKGKLS 470

Query: 316 TAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLL 375
            A+ +   M  +        Y  L++G+ +  N++EA  L++ II  G+   V+ YN ++
Sbjct: 471 MAKVMLTEMLDQNIAPDAFVYATLVDGFIRHGNLDEAKKLFQLIIEKGLDPGVVGYNVMI 530

Query: 376 SGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFE 435
            G  ++G    A    D+M+  +  PD+ T++ +IDG  K + +   +K+F ++     +
Sbjct: 531 KGFSKSGMMDNAILCIDKMRRAHHVPDIFTFSTIIDGYVKQHNMNAVLKIFGLMVKQNCK 590

Query: 436 FGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDF 495
             +  +  LI+G C+ G    A +LF  +   GL P+VVTYSI+I   C++ KL KA  +
Sbjct: 591 PNVVTYTSLINGYCRKGETKMAEKLFSMMRSHGLKPSVVTYSILIGSFCKEAKLGKAVSY 650

Query: 496 LLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPD 544
              M  N C PN   F+ L++GF  N K + V    + + E  R++  D
Sbjct: 651 FELMLINKCTPNDAAFHYLVNGF-TNTKATAVSREPNNLHENSRSMFED 698



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 123/457 (26%), Positives = 216/457 (47%), Gaps = 37/457 (8%)

Query: 55  NLNEARYFFGY----------MTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSI 104
           N+ +ARY  G+          M+     P + ++N L          +       + +  
Sbjct: 318 NIIDARYKLGFDIKAKDTLKEMSENCCEPDLVTYNTLINHFCSRGEVEEAEKLLEQTIRR 377

Query: 105 GLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCR 164
           GL P+ LT   L++       G C +    +AT     M   G+  D+I+YG LI+G   
Sbjct: 378 GLAPNKLTYTPLVH-------GYCKQGEYTKATDYLIEMSTSGLEVDMISYGALIHGLVV 430

Query: 165 TGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGI 224
            G +  AL +  +M++     G++   NI  Y+++++ L K+G +  AK +  EM  + I
Sbjct: 431 AGEVDTALTIRDRMMN----RGILPDANI--YNVLMNGLFKKGKLSMAKVMLTEMLDQNI 484

Query: 225 NPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANG 284
            P   V  TL+ GF   GN +E   LF  +++ G  P ++ +NVMI    K G ++ A  
Sbjct: 485 APDAFVYATLVDGFIRHGNLDEAKKLFQLIIEKGLDPGVVGYNVMIKGFSKSGMMDNAIL 544

Query: 285 LLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYC 344
            ++ M +    PD FT+++++DGY     ++   +IF  M  + CK  VV+Y  LINGYC
Sbjct: 545 CIDKMRRAHHVPDIFTFSTIIDGYVKQHNMNAVLKIFGLMVKQNCKPNVVTYTSLINGYC 604

Query: 345 KILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLS 404
           +    + A  L+  + S+G++ +V+TY+ L+    +  + G A   F+ M +    P+ +
Sbjct: 605 RKGETKMAEKLFSMMRSHGLKPSVVTYSILIGSFCKEAKLGKAVSYFELMLINKCTPNDA 664

Query: 405 TYNILIDGLC--KNNCVQEAVKLFHMLEMNKFE--FGIEI----------FNCLIDGLCK 450
            ++ L++G    K   V       H    + FE  F   I          +NC++  LC+
Sbjct: 665 AFHYLVNGFTNTKATAVSREPNNLHENSRSMFEDFFSRMIGDGWTQKAAAYNCILICLCQ 724

Query: 451 AGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKG 487
              +  A +L +K+   GL    V++  +IHG+C +G
Sbjct: 725 QRMVKTALQLRNKMLAFGLCSDAVSFVALIHGICLEG 761



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 118/420 (28%), Positives = 194/420 (46%), Gaps = 7/420 (1%)

Query: 150 PDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLV 209
           P      +L+N   +   +  A +L+ +M+  D +NG     + ++ SI++  LC +G +
Sbjct: 167 PSTYACNSLLNLLVKHRRIETAHQLYDEMI--DRDNGDDICVDNYTTSIMVKGLCLKGRI 224

Query: 210 DKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVM 269
           +   +L     G+G  P +V   TLI G+C  G  E    LF ++   G  P L TF  +
Sbjct: 225 EDGIKLIESRWGKGCVPNIVFYNTLIDGYCKKGEVESAYKLFKKLKMKGFIPTLQTFGSL 284

Query: 270 IDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGC 329
           ++  CK G     + LL  M  RGL+ +   YN+++D    +G    A++    M    C
Sbjct: 285 VNGFCKMGMFEAIDLLLLEMKDRGLSVNVQMYNNIIDARYKLGFDIKAKDTLKEMSENCC 344

Query: 330 KHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQK 389
           +  +V+YN LIN +C    VEEA  L  Q I  G+    +TY  L+ G  + G+   A  
Sbjct: 345 EPDLVTYNTLINHFCSRGEVEEAEKLLEQTIRRGLAPNKLTYTPLVHGYCKQGEYTKATD 404

Query: 390 LFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLC 449
              EM    +E D+ +Y  LI GL     V  A+ +   +          I+N L++GL 
Sbjct: 405 YLIEMSTSGLEVDMISYGALIHGLVVAGEVDTALTIRDRMMNRGILPDANIYNVLMNGLF 464

Query: 450 KAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVV 509
           K G+L  A  +  ++  + + P    Y+ ++ G  R G L++A      + + G  P VV
Sbjct: 465 KKGKLSMAKVMLTEMLDQNIAPDAFVYATLVDGFIRHGNLDEAKKLFQLIIEKGLDPGVV 524

Query: 510 TFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSK 569
            +N ++ GF ++      +  + KM       VPD  TFS ++D   K    H  +AV K
Sbjct: 525 GYNVMIKGFSKSGMMDNAILCIDKMRRAHH--VPDIFTFSTIIDGYVKQ---HNMNAVLK 579



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 84/287 (29%), Positives = 136/287 (47%), Gaps = 11/287 (3%)

Query: 286 LELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIF---LSMHSKGCKHTVVSYNILING 342
           LE M  +   P R   + ++  Y  VG +D A E++   + +H+     +  + N L+N 
Sbjct: 121 LEEMKTKETIPTREALSDVLCAYADVGLVDKALEVYHGVVKLHNS--LPSTYACNSLLNL 178

Query: 343 YCKILNVEEAMSLYRQII--SNGVRQTVITYNT--LLSGLFQAGQAGYAQKLFDEMKLYN 398
             K   +E A  LY ++I   NG    V  Y T  ++ GL   G+     KL +      
Sbjct: 179 LVKHRRIETAHQLYDEMIDRDNGDDICVDNYTTSIMVKGLCLKGRIEDGIKLIESRWGKG 238

Query: 399 VEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAW 458
             P++  YN LIDG CK   V+ A KLF  L+M  F   ++ F  L++G CK G  +   
Sbjct: 239 CVPNIVFYNTLIDGYCKKGEVESAYKLFKKLKMKGFIPTLQTFGSLVNGFCKMGMFEAID 298

Query: 459 ELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGF 518
            L  ++  +GL   V  Y+ +I    + G   KA D L  M +N C P++VT+NTL++ F
Sbjct: 299 LLLLEMKDRGLSVNVQMYNNIIDARYKLGFDIKAKDTLKEMSENCCEPDLVTYNTLINHF 358

Query: 519 LQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECS 565
               +  +  +LL +     R L P+  T++ +V    K  +Y + +
Sbjct: 359 CSRGEVEEAEKLLEQTI--RRGLAPNKLTYTPLVHGYCKQGEYTKAT 403



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 94/443 (21%), Positives = 168/443 (37%), Gaps = 87/443 (19%)

Query: 44  FLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVS 103
            +H  CK G     +A  +   M+       + S+  L   +      D  ++   ++++
Sbjct: 389 LVHGYCKQG--EYTKATDYLIEMSTSGLEVDMISYGALIHGLVVAGEVDTALTIRDRMMN 446

Query: 104 IGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFC 163
            G+LPD    N+L+N       GL  + ++  A  +   M+   + PD   Y TL++GF 
Sbjct: 447 RGILPDANIYNVLMN-------GLFKKGKLSMAKVMLTEMLDQNIAPDAFVYATLVDGFI 499

Query: 164 RTGNLSVALRL---------------HKKMVSGDYENGLISKT--------------NIF 194
           R GNL  A +L               +  M+ G  ++G++                 +IF
Sbjct: 500 RHGNLDEAKKLFQLIIEKGLDPGVVGYNVMIKGFSKSGMMDNAILCIDKMRRAHHVPDIF 559

Query: 195 SYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEM 254
           ++S IID   K+  ++   ++F  M  +   P VV  T+LI+G+C  G  +    LF  M
Sbjct: 560 TFSTIIDGYVKQHNMNAVLKIFGLMVKQNCKPNVVTYTSLINGYCRKGETKMAEKLFSMM 619

Query: 255 LDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRI 314
              G +P+++T++++I   CK  K+ +A    ELM+     P+   ++ L++G+      
Sbjct: 620 RSHGLKPSVVTYSILIGSFCKEAKLGKAVSYFELMLINKCTPNDAAFHYLVNGFTNTKAT 679

Query: 315 DTARE--------------IFLSMHSKGCKHTVVSYN----------------------- 337
             +RE               F  M   G      +YN                       
Sbjct: 680 AVSREPNNLHENSRSMFEDFFSRMIGDGWTQKAAAYNCILICLCQQRMVKTALQLRNKML 739

Query: 338 ------------ILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAG 385
                        LI+G C   N +E  ++    ++ G  Q  + Y+  L      G   
Sbjct: 740 AFGLCSDAVSFVALIHGICLEGNSKEWRNMISCDLNEGELQIALKYSLELDKFIPEGGIS 799

Query: 386 YAQKLFDEMKLYNVEPDLSTYNI 408
            A  +   M    V P+    N+
Sbjct: 800 EASGILQAMIKGYVSPNQDLNNL 822



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 93/389 (23%), Positives = 159/389 (40%), Gaps = 44/389 (11%)

Query: 3   SRTQFRCLFSSETVSKVKLSSLFKSPRQIAAVSSPETQLNEFLHENCK----------SG 52
            R   R +     +  V ++ LFK  +    +S  +  L E L +N             G
Sbjct: 442 DRMMNRGILPDANIYNVLMNGLFKKGK----LSMAKVMLTEMLDQNIAPDAFVYATLVDG 497

Query: 53  II---NLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPD 109
            I   NL+EA+  F  +      P +  +N++    +K+   D  I    K+     +PD
Sbjct: 498 FIRHGNLDEAKKLFQLIIEKGLDPGVVGYNVMIKGFSKSGMMDNAILCIDKMRRAHHVPD 557

Query: 110 FLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLS 169
             T + +I+       G   ++ +     +F  M+    +P+V+TY +LING+CR G   
Sbjct: 558 IFTFSTIID-------GYVKQHNMNAVLKIFGLMVKQNCKPNVVTYTSLINGYCRKGETK 610

Query: 170 VALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVV 229
           +A +L   M S    +GL  K ++ +YSI+I S CKE  + KA   F  M      P   
Sbjct: 611 MAEKLFSMMRS----HGL--KPSVVTYSILIGSFCKEAKLGKAVSYFELMLINKCTPNDA 664

Query: 230 VCTTLIHGFC---CAGNWEEVNGL-----------FIEMLDLGPRPNLLTFNVMIDCLCK 275
               L++GF          E N L           F  M+  G       +N ++ CLC+
Sbjct: 665 AFHYLVNGFTNTKATAVSREPNNLHENSRSMFEDFFSRMIGDGWTQKAAAYNCILICLCQ 724

Query: 276 GGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVS 335
              +  A  L   M+  GL  D  ++ +L+ G CL G     R +     ++G     + 
Sbjct: 725 QRMVKTALQLRNKMLAFGLCSDAVSFVALIHGICLEGNSKEWRNMISCDLNEGELQIALK 784

Query: 336 YNILINGYCKILNVEEAMSLYRQIISNGV 364
           Y++ ++ +     + EA  + + +I   V
Sbjct: 785 YSLELDKFIPEGGISEASGILQAMIKGYV 813


>gi|15219046|ref|NP_175671.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207557|sp|Q9SSR4.1|PPR77_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g52620
 gi|5903044|gb|AAD55603.1|AC008016_13 Contains 3 PF|01535 DUF domains [Arabidopsis thaliana]
 gi|332194709|gb|AEE32830.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 819

 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 157/545 (28%), Positives = 268/545 (49%), Gaps = 33/545 (6%)

Query: 41  LNEFLHENCKSGIINLNEARYFFGYMTHMQPS-PPISSFNLLFGAVAKNRHYDAVISFYR 99
           L+  LH   +SG  +L++A   + Y+  +  S P + + N L   + K+R        Y 
Sbjct: 137 LSHVLHAYAESG--SLSKAVEIYDYVVELYDSVPDVIACNSLLSLLVKSRRLGDARKVYD 194

Query: 100 KLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLI 159
           ++   G   D  +  IL+       +G+C E +++    L +     G  P+++ Y T+I
Sbjct: 195 EMCDRGDSVDNYSTCILV-------KGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYNTII 247

Query: 160 NGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEM 219
            G+C+ G++  A  + K++    +         + ++  +I+  CKEG    +  L  E+
Sbjct: 248 GGYCKLGDIENAYLVFKELKLKGF------MPTLETFGTMINGFCKEGDFVASDRLLSEV 301

Query: 220 KGRGINPAVVVCTTLI-----HGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLC 274
           K RG+  +V     +I     HG+    +  E  G  I       +P++ T+N++I+ LC
Sbjct: 302 KERGLRVSVWFLNNIIDAKYRHGY--KVDPAESIGWIIAN---DCKPDVATYNILINRLC 356

Query: 275 KGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVV 334
           K GK   A G L+   ++GL P+  +Y  L+  YC     D A ++ L M  +GCK  +V
Sbjct: 357 KEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIV 416

Query: 335 SYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEM 394
           +Y ILI+G     ++++A+++  ++I  GV      YN L+SGL + G+   A+ LF EM
Sbjct: 417 TYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEM 476

Query: 395 KLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRL 454
              N+ PD   Y  LIDG  ++    EA K+F +      +  +   N +I G C++G L
Sbjct: 477 LDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGML 536

Query: 455 DNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTL 514
           D A    +++ ++ LVP   TYS +I G  ++  +  A     YMEKN C PNVVT+ +L
Sbjct: 537 DEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSL 596

Query: 515 MHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKSSYRA 574
           ++GF          E   +M    R+LVP+  T++ ++  LAK     E S + K+ Y  
Sbjct: 597 INGFCCQGDFKMAEETFKEMQ--LRDLVPNVVTYTTLIRSLAK-----ESSTLEKAVYYW 649

Query: 575 CLYVT 579
            L +T
Sbjct: 650 ELMMT 654



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 134/516 (25%), Positives = 238/516 (46%), Gaps = 54/516 (10%)

Query: 55  NLNEARYFFGYMTHMQPS----------PPISSFNLLFGAVAKNRHYDAVISFYRKLVSI 104
           N+ +A+Y  GY      S          P ++++N+L   + K    +  + F  +    
Sbjct: 315 NIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKK 374

Query: 105 GLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCR 164
           GL+P+ L+   LI  +       C       A+ L   M   G +PD++TYG LI+G   
Sbjct: 375 GLIPNNLSYAPLIQAY-------CKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVV 427

Query: 165 TGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGI 224
           +G++  A+ +  K++    + G+     I  Y++++  LCK G    AK LF EM  R I
Sbjct: 428 SGHMDDAVNMKVKLI----DRGVSPDAAI--YNMLMSGLCKTGRFLPAKLLFSEMLDRNI 481

Query: 225 NPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANG 284
            P   V  TLI GF  +G+++E   +F   ++ G + +++  N MI   C+ G ++EA  
Sbjct: 482 LPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALA 541

Query: 285 LLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYC 344
            +  M +  L PD+FTY++++DGY     + TA +IF  M    CK  VV+Y  LING+C
Sbjct: 542 CMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFC 601

Query: 345 KILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYN-VEPDL 403
              + + A   ++++    +   V+TY TL+  L +          + E+ + N   P+ 
Sbjct: 602 CQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNE 661

Query: 404 STYNILIDGLCK------------NNCVQEAV--KLFHMLEMNKFEFGIEIFNCLIDGLC 449
            T+N L+ G  K            +N  Q ++  + FH ++ + +      +N  +  LC
Sbjct: 662 VTFNCLLQGFVKKTSGKVLAEPDGSNHGQSSLFSEFFHRMKSDGWSDHAAAYNSALVCLC 721

Query: 450 KAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGK----------------LEKAN 493
             G +  A     K+ +KG  P  V+++ ++HG C  G                 LE A 
Sbjct: 722 VHGMVKTACMFQDKMVKKGFSPDPVSFAAILHGFCVVGNSKQWRNMDFCNLGEKGLEVAV 781

Query: 494 DFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVE 529
            +   +E++   P +   +T++H  ++   T + VE
Sbjct: 782 RYSQVLEQHLPQPVICEASTILHAMVEKADTKEPVE 817



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 87/361 (24%), Positives = 168/361 (46%), Gaps = 2/361 (0%)

Query: 226 PAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGL 285
           P V+ C +L+     +    +   ++ EM D G   +  +  +++  +C  GK+     L
Sbjct: 168 PDVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKGMCNEGKVEVGRKL 227

Query: 286 LELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCK 345
           +E    +G  P+   YN+++ GYC +G I+ A  +F  +  KG   T+ ++  +ING+CK
Sbjct: 228 IEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCK 287

Query: 346 ILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLST 405
             +   +  L  ++   G+R +V   N ++   ++ G      +    +   + +PD++T
Sbjct: 288 EGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVAT 347

Query: 406 YNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLP 465
           YNILI+ LCK    + AV                 +  LI   CK+   D A +L  ++ 
Sbjct: 348 YNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMA 407

Query: 466 QKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTS 525
           ++G  P +VTY I+IHGL   G ++ A +  + +   G +P+   +N LM G  +  +  
Sbjct: 408 ERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFL 467

Query: 526 KVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKSSYRACLYVTIFQPSS 585
               L  +M +  RN++PD   ++ ++D   +   + E   V   S    + V +   ++
Sbjct: 468 PAKLLFSEMLD--RNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNA 525

Query: 586 L 586
           +
Sbjct: 526 M 526


>gi|168047804|ref|XP_001776359.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162672319|gb|EDQ58858.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 499

 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 144/423 (34%), Positives = 220/423 (52%), Gaps = 20/423 (4%)

Query: 76  SSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKE 135
           S++N L  A  K  +    ++ YR +   GL PD  T N+L+N F   +R         +
Sbjct: 90  SAYNSLIDAFVKAGYTQKALAVYRVMGQSGLRPDTYTFNVLMNAFKKAKR--------VD 141

Query: 136 ATW-LFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIF 194
           + W LF+ M      P+VITY  LI+  C+ G +  AL++   M S         + NIF
Sbjct: 142 SVWKLFEEMQNQNCSPNVITYSILIDAVCKCGGVEKALKVFLDMKSRG------CRPNIF 195

Query: 195 SYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEM 254
           +Y+ +ID L K G VDKA  LF EM   G+    VV  +LIHG   +G  +    LF EM
Sbjct: 196 TYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNSLIHGLGRSGRADAAAKLFREM 255

Query: 255 LDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRI 314
           L  G +P+ +TF  ++  L   G+ +EA  + +     G   D   YN L+D  C   R+
Sbjct: 256 LSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQEARDVGCALDVNLYNVLIDTLCKSKRL 315

Query: 315 DTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTL 374
           D A EIF  +   G    V ++N L++G CK   + +A  L   +   G    V  YNTL
Sbjct: 316 DEAWEIFGELEEDGLVPDVYTFNALMDGLCKSGRIHDAFILLGDMKRAGCTPDVTVYNTL 375

Query: 375 LSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKF 434
           + GL ++G+   A +L  EM+    EPD+ TYN LID  CK   +++A++LF  +    F
Sbjct: 376 IDGLRKSGRVEEAGQLLLEMQSLGYEPDVVTYNTLIDESCKGGRIEDALRLFEEISAKGF 435

Query: 435 EFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQK---GLV-PTVVTYSIMIHGLCRKGKLE 490
              +  +N +++GLC AGR+D A++LF+ + Q+   G++ P  VTY+ +++G  + G  E
Sbjct: 436 ANTV-TYNTILNGLCMAGRVDEAYKLFNGMKQETVDGVIDPDFVTYTTLLNGARQAGLSE 494

Query: 491 KAN 493
            AN
Sbjct: 495 LAN 497



 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 129/391 (32%), Positives = 216/391 (55%), Gaps = 11/391 (2%)

Query: 134 KEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNI 193
           ++A  +++ M   G+RPD  T+  L+N F +   +    +L ++M + +         N+
Sbjct: 106 QKALAVYRVMGQSGLRPDTYTFNVLMNAFKKAKRVDSVWKLFEEMQNQN------CSPNV 159

Query: 194 FSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIE 253
            +YSI+ID++CK G V+KA ++FL+MK RG  P +   T++I G   +G+ ++   LF E
Sbjct: 160 ITYSILIDAVCKCGGVEKALKVFLDMKSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEE 219

Query: 254 MLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGR 313
           M   G     + +N +I  L + G+ + A  L   M+ +GL PD  T+ SL+ G  + GR
Sbjct: 220 MTSEGLVATRVVYNSLIHGLGRSGRADAAAKLFREMLSKGLQPDHVTFTSLVYGLGVAGR 279

Query: 314 IDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNT 373
              AR IF      GC   V  YN+LI+  CK   ++EA  ++ ++  +G+   V T+N 
Sbjct: 280 ASEARRIFQEARDVGCALDVNLYNVLIDTLCKSKRLDEAWEIFGELEEDGLVPDVYTFNA 339

Query: 374 LLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNK 433
           L+ GL ++G+   A  L  +MK     PD++ YN LIDGL K+  V+EA +L   ++   
Sbjct: 340 LMDGLCKSGRIHDAFILLGDMKRAGCTPDVTVYNTLIDGLRKSGRVEEAGQLLLEMQSLG 399

Query: 434 FEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKAN 493
           +E  +  +N LID  CK GR+++A  LF ++  KG   T VTY+ +++GLC  G++++A 
Sbjct: 400 YEPDVVTYNTLIDESCKGGRIEDALRLFEEISAKGFANT-VTYNTILNGLCMAGRVDEAY 458

Query: 494 DFLLYMEKNGC----APNVVTFNTLMHGFLQ 520
                M++        P+ VT+ TL++G  Q
Sbjct: 459 KLFNGMKQETVDGVIDPDFVTYTTLLNGARQ 489



 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 121/378 (32%), Positives = 202/378 (53%), Gaps = 6/378 (1%)

Query: 158 LINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFL 217
           L  G+   G L  ++   K+M       G        +Y+ +ID+  K G   KA  ++ 
Sbjct: 60  LARGYASAGLLEKSVEALKRM------EGHRCALTASAYNSLIDAFVKAGYTQKALAVYR 113

Query: 218 EMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGG 277
            M   G+ P       L++ F  A   + V  LF EM +    PN++T++++ID +CK G
Sbjct: 114 VMGQSGLRPDTYTFNVLMNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAVCKCG 173

Query: 278 KINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYN 337
            + +A  +   M  RG  P+ FTY S++DG    G +D A  +F  M S+G   T V YN
Sbjct: 174 GVEKALKVFLDMKSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYN 233

Query: 338 ILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLY 397
            LI+G  +    + A  L+R+++S G++   +T+ +L+ GL  AG+A  A+++F E +  
Sbjct: 234 SLIHGLGRSGRADAAAKLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQEARDV 293

Query: 398 NVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNA 457
               D++ YN+LID LCK+  + EA ++F  LE +     +  FN L+DGLCK+GR+ +A
Sbjct: 294 GCALDVNLYNVLIDTLCKSKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLCKSGRIHDA 353

Query: 458 WELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHG 517
           + L   + + G  P V  Y+ +I GL + G++E+A   LL M+  G  P+VVT+NTL+  
Sbjct: 354 FILLGDMKRAGCTPDVTVYNTLIDGLRKSGRVEEAGQLLLEMQSLGYEPDVVTYNTLIDE 413

Query: 518 FLQNNKTSKVVELLHKMA 535
             +  +    + L  +++
Sbjct: 414 SCKGGRIEDALRLFEEIS 431



 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 123/384 (32%), Positives = 204/384 (53%), Gaps = 18/384 (4%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
           P   +FN+L  A  K +  D+V   + ++ +    P+ +T +ILI+        +C    
Sbjct: 122 PDTYTFNVLMNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDA-------VCKCGG 174

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
           +++A  +F +M + G RP++ TY ++I+G  ++G++  A  L ++M S     GL++   
Sbjct: 175 VEKALKVFLDMKSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTS----EGLVATRV 230

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
           +  Y+ +I  L + G  D A +LF EM  +G+ P  V  T+L++G   AG   E   +F 
Sbjct: 231 V--YNSLIHGLGRSGRADAAAKLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQ 288

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
           E  D+G   ++  +NV+ID LCK  +++EA  +   + + GL PD +T+N+LMDG C  G
Sbjct: 289 EARDVGCALDVNLYNVLIDTLCKSKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLCKSG 348

Query: 313 RIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYN 372
           RI  A  +   M   GC   V  YN LI+G  K   VEEA  L  ++ S G    V+TYN
Sbjct: 349 RIHDAFILLGDMKRAGCTPDVTVYNTLIDGLRKSGRVEEAGQLLLEMQSLGYEPDVVTYN 408

Query: 373 TLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMN 432
           TL+    + G+   A +LF+E+       +  TYN +++GLC    V EA KLF+ ++  
Sbjct: 409 TLIDESCKGGRIEDALRLFEEISAKGF-ANTVTYNTILNGLCMAGRVDEAYKLFNGMKQE 467

Query: 433 KFEFGIE----IFNCLIDGLCKAG 452
             +  I+     +  L++G  +AG
Sbjct: 468 TVDGVIDPDFVTYTTLLNGARQAG 491



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 112/387 (28%), Positives = 186/387 (48%), Gaps = 34/387 (8%)

Query: 21  LSSLFKSPRQIAAVSSPETQLNEFLHENCKSGIIN-------------LNEARYFFGYMT 67
           L + FK  +++ +V        E  ++NC   +I              + +A   F  M 
Sbjct: 130 LMNAFKKAKRVDSVWK---LFEEMQNQNCSPNVITYSILIDAVCKCGGVEKALKVFLDMK 186

Query: 68  HMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGL 127
                P I ++  +   + K+ H D     + ++ S GL+   +  N LI+       GL
Sbjct: 187 SRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNSLIH-------GL 239

Query: 128 CVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGL 187
               R   A  LF+ M++ G++PD +T+ +L+ G    G  S A R+ ++      + G 
Sbjct: 240 GRSGRADAAAKLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQEA----RDVGC 295

Query: 188 ISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEV 247
               N+  Y+++ID+LCK   +D+A E+F E++  G+ P V     L+ G C +G   + 
Sbjct: 296 ALDVNL--YNVLIDTLCKSKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLCKSGRIHDA 353

Query: 248 NGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDG 307
             L  +M   G  P++  +N +ID L K G++ EA  LL  M   G  PD  TYN+L+D 
Sbjct: 354 FILLGDMKRAGCTPDVTVYNTLIDGLRKSGRVEEAGQLLLEMQSLGYEPDVVTYNTLIDE 413

Query: 308 YCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLY----RQIISNG 363
            C  GRI+ A  +F  + +KG  +TV +YN ++NG C    V+EA  L+    ++ +   
Sbjct: 414 SCKGGRIEDALRLFEEISAKGFANTV-TYNTILNGLCMAGRVDEAYKLFNGMKQETVDGV 472

Query: 364 VRQTVITYNTLLSGLFQAGQAGYAQKL 390
           +    +TY TLL+G  QAG +  A  L
Sbjct: 473 IDPDFVTYTTLLNGARQAGLSELANSL 499



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 96/350 (27%), Positives = 166/350 (47%), Gaps = 16/350 (4%)

Query: 222 RGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINE 281
           RG  P+V  CTTL+     A      N     + ++     +L   + I+ L +G     
Sbjct: 13  RGGVPSVRACTTLVEMLGIA---RRFNEAEEVLAEVEKSRYILQPRIFIE-LARG---YA 65

Query: 282 ANGLLELMIQ--RGLNPDR-----FTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVV 334
           + GLLE  ++  + +   R       YNSL+D +   G    A  ++  M   G +    
Sbjct: 66  SAGLLEKSVEALKRMEGHRCALTASAYNSLIDAFVKAGYTQKALAVYRVMGQSGLRPDTY 125

Query: 335 SYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEM 394
           ++N+L+N + K   V+    L+ ++ +      VITY+ L+  + + G    A K+F +M
Sbjct: 126 TFNVLMNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAVCKCGGVEKALKVFLDM 185

Query: 395 KLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRL 454
           K     P++ TY  +IDGL K+  V +A  LF  +          ++N LI GL ++GR 
Sbjct: 186 KSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNSLIHGLGRSGRA 245

Query: 455 DNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTL 514
           D A +LF ++  KGL P  VT++ +++GL   G+  +A          GCA +V  +N L
Sbjct: 246 DAAAKLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQEARDVGCALDVNLYNVL 305

Query: 515 MHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHEC 564
           +    ++ +  +  E+  ++ E    LVPD  TF+ ++D L K  + H+ 
Sbjct: 306 IDTLCKSKRLDEAWEIFGELEED--GLVPDVYTFNALMDGLCKSGRIHDA 353


>gi|225434476|ref|XP_002278184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09060
           [Vitis vinifera]
          Length = 691

 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 160/605 (26%), Positives = 284/605 (46%), Gaps = 90/605 (14%)

Query: 29  RQIAAVSSPETQLNEF--LHE--NCKSGIINLN-------------EARYFFGYMTHMQP 71
           +  A  S P+  L+ F  +HE   C+ GI + N             EA  FF Y   M  
Sbjct: 86  KAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFETMGL 145

Query: 72  SPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVEN 131
           SP + ++N+L     + + +D        +   G  PD  +   LIN        L    
Sbjct: 146 SPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLIN-------SLAKNG 198

Query: 132 RIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSG--------DY 183
            + +A  LF  M   GV PDV  Y  LI+GF + G++  A  + ++++ G         Y
Sbjct: 199 YMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSY 258

Query: 184 E---NGLIS-------------------KTNIFSYSIIIDSLCKEGLVDKAKELFLEMKG 221
               NGL                       ++++YS +I  LC  G +D A  ++ EM  
Sbjct: 259 NVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAE 318

Query: 222 RGINPAVVVCTTLIHGFCCAGNWEE----------------------VNGLF-------- 251
            G++P VVV  T+++G+  AG  EE                      + GLF        
Sbjct: 319 NGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCRTVVSYNILIRGLFENAKVDEA 378

Query: 252 IEMLDLGPRPNL----LTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDG 307
           I + +L P  +     +T+ V++  LCK G +N+A  +LE       + D F Y+S+++G
Sbjct: 379 ISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMING 438

Query: 308 YCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQT 367
            C  GR+D    +   M   GCK      N +ING+ +   +E+A+  +  ++S G   T
Sbjct: 439 LCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPT 498

Query: 368 VITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFH 427
           V+TYNTL++GL +A +   A  L  EM     +P++ TY++L++GLC+   +  A+ L+ 
Sbjct: 499 VVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWC 558

Query: 428 MLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKG 487
                 F+  +++ N +I GLC +G++++A +L+ ++ Q+  VP +VT++ ++ G  +  
Sbjct: 559 QALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEGFYKVR 618

Query: 488 KLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTT 547
             E+A+    ++ + G  P+++++N  + G    ++ S  V  L+     +R ++P   T
Sbjct: 619 DFERASKIWDHILQYGPQPDIISYNITLKGLCSCHRISDAVGFLNDAV--DRGVLPTAIT 676

Query: 548 FSIVV 552
           ++I+V
Sbjct: 677 WNILV 681



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 124/449 (27%), Positives = 221/449 (49%), Gaps = 14/449 (3%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
           P I S+N++   + K   +D     + ++       D  T + LI+       GLC    
Sbjct: 253 PNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIH-------GLCGSGN 305

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
           +  AT ++K M   GV PDV+ Y T++NG+ R G +   L L K M              
Sbjct: 306 LDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCRT------- 358

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
           + SY+I+I  L +   VD+A  ++  +  +      +    L+HG C  G   +   +  
Sbjct: 359 VVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILE 418

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
           E  +     +   ++ MI+ LC+ G+++E  G+L+ M + G  P+    N++++G+    
Sbjct: 419 EAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRAS 478

Query: 313 RIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYN 372
           +++ A   F +M SKGC  TVV+YN LING  K     EA +L ++++  G +  +ITY+
Sbjct: 479 KLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYS 538

Query: 373 TLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMN 432
            L++GL Q  +   A  L+ +      +PD+  +NI+I GLC +  V++A++L+  ++  
Sbjct: 539 LLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQR 598

Query: 433 KFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKA 492
           K    +   N L++G  K    + A +++  + Q G  P +++Y+I + GLC   ++  A
Sbjct: 599 KCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQYGPQPDIISYNITLKGLCSCHRISDA 658

Query: 493 NDFLLYMEKNGCAPNVVTFNTLMHGFLQN 521
             FL      G  P  +T+N L+   L N
Sbjct: 659 VGFLNDAVDRGVLPTAITWNILVRAVLDN 687



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 127/452 (28%), Positives = 216/452 (47%), Gaps = 47/452 (10%)

Query: 146 FGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCK 205
           FG +P + +Y +L+N    +     A           Y   +    N+ +Y+I+I   C+
Sbjct: 108 FGCQPGIRSYNSLLNALIESNKWDEAESFFL------YFETMGLSPNLQTYNILIKISCR 161

Query: 206 EGLVDKAKE-----------------------------------LFLEMKGRGINPAVVV 230
           +   DKAKE                                   LF EM  RG+ P V  
Sbjct: 162 KKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVAC 221

Query: 231 CTTLIHGFCCAGNWEEVNGLFIEMLDLGPR--PNLLTFNVMIDCLCKGGKINEANGLLEL 288
              LI GF   G+    + ++  +L  GP   PN+ ++NVMI+ LCK GK +E+  +   
Sbjct: 222 YNILIDGFFKKGDILNASEIWERLLK-GPSVYPNIPSYNVMINGLCKCGKFDESFEIWHR 280

Query: 289 MIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILN 348
           M +     D +TY++L+ G C  G +D A  ++  M   G    VV YN ++NGY +   
Sbjct: 281 MKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGR 340

Query: 349 VEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNI 408
           +EE + L++ +   G R TV++YN L+ GLF+  +   A  +++ +   +   D  TY +
Sbjct: 341 IEECLELWKVMEKEGCR-TVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGV 399

Query: 409 LIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKG 468
           L+ GLCKN  + +A+ +    E  + +     ++ +I+GLC+ GRLD    +  ++ + G
Sbjct: 400 LVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHG 459

Query: 469 LVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVV 528
             P     + +I+G  R  KLE A  F   M   GC P VVT+NTL++G  +  + S+  
Sbjct: 460 CKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAY 519

Query: 529 ELLHKMAEPERNLVPDDTTFSIVVDLLAKDEK 560
            L+ +M    +   P+  T+S++++ L + +K
Sbjct: 520 ALVKEML--HKGWKPNMITYSLLMNGLCQGKK 549



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 95/371 (25%), Positives = 193/371 (52%), Gaps = 5/371 (1%)

Query: 199 IIDSLCKEGLVDKAKELFLEMKG-RGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDL 257
           +I +  K  + D+A ++F  M    G  P +    +L++    +  W+E    F+    +
Sbjct: 84  VIKAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFETM 143

Query: 258 GPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTA 317
           G  PNL T+N++I   C+  + ++A  LL  M ++G +PD F+Y +L++     G +  A
Sbjct: 144 GLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDA 203

Query: 318 REIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISN-GVRQTVITYNTLLS 376
            ++F  M  +G    V  YNILI+G+ K  ++  A  ++ +++    V   + +YN +++
Sbjct: 204 LKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMIN 263

Query: 377 GLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEF 436
           GL + G+   + +++  MK      DL TY+ LI GLC +  +  A +++  +  N    
Sbjct: 264 GLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSP 323

Query: 437 GIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFL 496
            + ++N +++G  +AGR++   EL+  + ++G   TVV+Y+I+I GL    K+++A    
Sbjct: 324 DVVVYNTMLNGYLRAGRIEECLELWKVMEKEG-CRTVVSYNILIRGLFENAKVDEAISIW 382

Query: 497 LYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLA 556
             + +  C  + +T+  L+HG  +N   +K + +L +      +L  D   +S +++ L 
Sbjct: 383 ELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDL--DTFAYSSMINGLC 440

Query: 557 KDEKYHECSAV 567
           ++ +  E + V
Sbjct: 441 REGRLDEVAGV 451



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 104/408 (25%), Positives = 186/408 (45%), Gaps = 51/408 (12%)

Query: 44  FLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVS 103
            +H  C SG  NL+ A   +  M     SP +  +N +     +    +  +  ++ +  
Sbjct: 296 LIHGLCGSG--NLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEK 353

Query: 104 IGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFC 163
            G     ++ NILI       RGL    ++ EA  +++ +       D +TYG L++G C
Sbjct: 354 EGCR-TVVSYNILI-------RGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLC 405

Query: 164 RTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDK------------ 211
           + G L+ AL + ++      ENG     + F+YS +I+ LC+EG +D+            
Sbjct: 406 KNGYLNKALSILEEA-----ENGR-GDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHG 459

Query: 212 -----------------------AKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVN 248
                                  A   F  M  +G  P VV   TLI+G   A  + E  
Sbjct: 460 CKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAY 519

Query: 249 GLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGY 308
            L  EML  G +PN++T++++++ LC+G K++ A  L    +++G  PD   +N ++ G 
Sbjct: 520 ALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGL 579

Query: 309 CLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTV 368
           C  G+++ A +++  M  + C   +V++N L+ G+ K+ + E A  ++  I+  G +  +
Sbjct: 580 CSSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQYGPQPDI 639

Query: 369 ITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKN 416
           I+YN  L GL    +   A    ++     V P   T+NIL+  +  N
Sbjct: 640 ISYNITLKGLCSCHRISDAVGFLNDAVDRGVLPTAITWNILVRAVLDN 687



 Score = 48.1 bits (113), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 32/134 (23%), Positives = 58/134 (43%), Gaps = 10/134 (7%)

Query: 37  PETQL-NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVI 95
           P+ ++ N  +H  C SG   + +A   +  M   +  P + + N L     K R ++   
Sbjct: 567 PDVKMHNIIIHGLCSSG--KVEDALQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDFERAS 624

Query: 96  SFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITY 155
             +  ++  G  PD ++ NI +       +GLC  +RI +A     + +  GV P  IT+
Sbjct: 625 KIWDHILQYGPQPDIISYNITL-------KGLCSCHRISDAVGFLNDAVDRGVLPTAITW 677

Query: 156 GTLINGFCRTGNLS 169
             L+      G L+
Sbjct: 678 NILVRAVLDNGALT 691


>gi|225447872|ref|XP_002269015.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Vitis vinifera]
          Length = 656

 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 138/487 (28%), Positives = 243/487 (49%), Gaps = 21/487 (4%)

Query: 78  FNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEAT 137
           F+LL     + R  D     +  +   G++P   T N +++ F          NR++ A 
Sbjct: 182 FDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLF-------LKLNRMEMAW 234

Query: 138 WLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYS 197
            L+  M    +   V T+  ++N  C+ G L  A    ++ +   +  GL  K N+ SY+
Sbjct: 235 VLYAEMFRLRISSTVYTFNIMVNVLCKEGKLKKA----REFIG--FMEGLGFKPNVVSYN 288

Query: 198 IIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDL 257
            II      G ++ A+ +   M+ +GI P      +LI G C  G  EE +GLF +M+++
Sbjct: 289 TIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEI 348

Query: 258 GPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTA 317
           G  PN +T+N +ID  C  G +  A    + M+++G+ P   TYN L+    + GR+  A
Sbjct: 349 GLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEA 408

Query: 318 REIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSG 377
            ++   M  KG     ++YNILINGY +  N ++A  L+ +++S G+  T +TY +L+  
Sbjct: 409 DDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYV 468

Query: 378 LFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFG 437
           L +  +   A  LF+++    V PD+  +N ++DG C N  V+ A  L   ++       
Sbjct: 469 LSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPD 528

Query: 438 IEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLL 497
              FN L+ G C+ G+++ A  L  ++ ++G+ P  ++Y+ +I G  R+G ++ A     
Sbjct: 529 EVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRD 588

Query: 498 YMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTF-SIV----- 551
            M   G  P ++T+N L+    +N +     ELL +M    + + PDD+T+ S++     
Sbjct: 589 EMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMV--NKGISPDDSTYLSLIEGMGN 646

Query: 552 VDLLAKD 558
           VD L +D
Sbjct: 647 VDTLVED 653



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 132/462 (28%), Positives = 226/462 (48%), Gaps = 13/462 (2%)

Query: 57  NEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNIL 116
           +EA   F  M      P I + N +     K    +     Y ++  + +     T NI+
Sbjct: 196 DEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAEMFRLRISSTVYTFNIM 255

Query: 117 INCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHK 176
           +N        LC E ++K+A      M   G +P+V++Y T+I+G+   GN+  A R+  
Sbjct: 256 VNV-------LCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILD 308

Query: 177 KMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIH 236
            M     E       + ++Y  +I  +CKEG +++A  LF +M   G+ P  V   TLI 
Sbjct: 309 AMRVKGIE------PDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLID 362

Query: 237 GFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNP 296
           G+C  G+ E       EM+  G  P++ T+N+++  L   G++ EA+ +++ M ++G+ P
Sbjct: 363 GYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIP 422

Query: 297 DRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLY 356
           D  TYN L++GY   G    A ++   M SKG + T V+Y  LI    +   ++EA  L+
Sbjct: 423 DAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLF 482

Query: 357 RQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKN 416
            +I+  GV   VI +N ++ G    G    A  L  EM   +V PD  T+N L+ G C+ 
Sbjct: 483 EKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCRE 542

Query: 417 NCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTY 476
             V+EA  L   ++    +     +N LI G  + G + +A+ +  ++   G  PT++TY
Sbjct: 543 GKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTY 602

Query: 477 SIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGF 518
           + +I  LC+  + + A + L  M   G +P+  T+ +L+ G 
Sbjct: 603 NALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGM 644



 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 131/450 (29%), Positives = 218/450 (48%), Gaps = 50/450 (11%)

Query: 34  VSSPETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDA 93
           +SS     N  ++  CK G   L +AR F G+M  +   P + S+N +    +   + + 
Sbjct: 245 ISSTVYTFNIMVNVLCKEG--KLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEG 302

Query: 94  VISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVI 153
                  +   G+ PD  T   LI+       G+C E R++EA+ LF  M+  G+ P+ +
Sbjct: 303 ARRILDAMRVKGIEPDSYTYGSLIS-------GMCKEGRLEEASGLFDKMVEIGLVPNAV 355

Query: 154 TYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAK 213
           TY TLI+G+C  G+L  A     +MV    + G++   ++ +Y++++ +L  EG + +A 
Sbjct: 356 TYNTLIDGYCNKGDLERAFSYRDEMV----KKGIMP--SVSTYNLLVHALFMEGRMGEAD 409

Query: 214 ELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCL 273
           ++  EM+ +GI P  +    LI+G+   GN ++   L  EML  G  P  +T+  +I  L
Sbjct: 410 DMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVL 469

Query: 274 CKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTV 333
            +  ++ EA+ L E ++ +G++PD   +N+++DG+C  G ++ A  +   M  K      
Sbjct: 470 SRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDE 529

Query: 334 VSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDE 393
           V++N L+ G C+   VEEA  L  ++   G++   I+YNTL+SG  + G    A ++ DE
Sbjct: 530 VTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDE 589

Query: 394 MKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGR 453
           M      P L TYN LI  LCKN   QE                                
Sbjct: 590 MLSIGFNPTLLTYNALIKCLCKN---QEG------------------------------- 615

Query: 454 LDNAWELFHKLPQKGLVPTVVTYSIMIHGL 483
            D A EL  ++  KG+ P   TY  +I G+
Sbjct: 616 -DLAEELLKEMVNKGISPDDSTYLSLIEGM 644



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 66/261 (25%), Positives = 129/261 (49%), Gaps = 7/261 (2%)

Query: 313 RIDTAREIF----LSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTV 368
           RI T RE+F    LS      K ++V +++L+   C++   +EA   +  +   G+   +
Sbjct: 156 RIATNRELFDELTLSRDRLSVKSSIV-FDLLVRVCCELRRADEAFKCFYMMKEKGIVPKI 214

Query: 369 ITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHM 428
            T N +LS   +  +   A  L+ EM    +   + T+NI+++ LCK   +++A +    
Sbjct: 215 ETCNDMLSLFLKLNRMEMAWVLYAEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGF 274

Query: 429 LEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGK 488
           +E   F+  +  +N +I G    G ++ A  +   +  KG+ P   TY  +I G+C++G+
Sbjct: 275 MEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGR 334

Query: 489 LEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTF 548
           LE+A+     M + G  PN VT+NTL+ G+       +      +M   ++ ++P  +T+
Sbjct: 335 LEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMV--KKGIMPSVSTY 392

Query: 549 SIVVDLLAKDEKYHECSAVSK 569
           +++V  L  + +  E   + K
Sbjct: 393 NLLVHALFMEGRMGEADDMIK 413



 Score = 52.8 bits (125), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 36/130 (27%), Positives = 49/130 (37%), Gaps = 9/130 (6%)

Query: 33  AVSSPETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYD 92
           +V   E   N  +   C+ G   + EAR     M      P   S+N L     +     
Sbjct: 524 SVPPDEVTFNTLMQGRCREG--KVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIK 581

Query: 93  AVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDV 152
                  +++SIG  P  LT N LI C    + G   E        L K M+  G+ PD 
Sbjct: 582 DAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEE-------LLKEMVNKGISPDD 634

Query: 153 ITYGTLINGF 162
            TY +LI G 
Sbjct: 635 STYLSLIEGM 644


>gi|449446121|ref|XP_004140820.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680-like [Cucumis sativus]
          Length = 590

 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 127/389 (32%), Positives = 216/389 (55%), Gaps = 18/389 (4%)

Query: 93  AVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDV 152
            + +FY +++  G  P     NILIN F       C E  I++A  +F  +   G+RP  
Sbjct: 206 TIWTFYSEILEYGFPPKVQYYNILINKF-------CKEGSIRDAKLIFNEIRKRGLRPTT 258

Query: 153 ITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKA 212
           +++ TLING C++ NL    RL K M     EN +    ++F+YS++I  LCKEG +D A
Sbjct: 259 VSFNTLINGLCKSRNLDEGFRLKKTM----EENRIYP--DVFTYSVLIHGLCKEGRLDVA 312

Query: 213 KELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDC 272
           ++LF EM+ RG+ P  +  T LI G C +   +     + +ML +G +P+L+ +N +++ 
Sbjct: 313 EQLFDEMQQRGLRPNGITFTALIDGQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNG 372

Query: 273 LCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHT 332
           LCK G +N+A  L++ M   G+ PD+ TY +L+DGYC  G +++A EI   M+ +G    
Sbjct: 373 LCKVGDVNKARKLVDEMRMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLD 432

Query: 333 VVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFD 392
            V++  LI+G+C+   V +A    R+++  G++    TY  ++ G  + G      KL  
Sbjct: 433 NVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLK 492

Query: 393 EMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFH-MLEMNKFEFGIEIFNCLIDGLCKA 451
           EM++   +P + TYN+L++GLCK   ++ A  L   ML +      I  +N L++G CK 
Sbjct: 493 EMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDI-TYNILLEGHCKN 551

Query: 452 GRLDNAWELFHKLPQKGLVPTVVTYSIMI 480
           G+ ++  +L +   +KGL+     Y+ ++
Sbjct: 552 GKAEDLLKLRN---EKGLIVDYAYYTSLV 577



 Score =  208 bits (530), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 120/382 (31%), Positives = 198/382 (51%), Gaps = 10/382 (2%)

Query: 138 WLF-KNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSY 196
           W F   ++ +G  P V  Y  LIN FC+ G++  A     K++  +     +  T + S+
Sbjct: 208 WTFYSEILEYGFPPKVQYYNILINKFCKEGSIRDA-----KLIFNEIRKRGLRPTTV-SF 261

Query: 197 SIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLD 256
           + +I+ LCK   +D+   L   M+   I P V   + LIHG C  G  +    LF EM  
Sbjct: 262 NTLINGLCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQ 321

Query: 257 LGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDT 316
            G RPN +TF  +ID  C+  +I+ A      M+  G+ PD   YN+L++G C VG ++ 
Sbjct: 322 RGLRPNGITFTALIDGQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNK 381

Query: 317 AREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLS 376
           AR++   M   G K   ++Y  LI+GYCK  ++E AM + + +   GV    + +  L+S
Sbjct: 382 ARKLVDEMRMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALIS 441

Query: 377 GLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEF 436
           G  + G+   A++   EM    ++PD +TY ++IDG CK   V+   KL   +++N  + 
Sbjct: 442 GFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKP 501

Query: 437 GIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFL 496
           G+  +N L++GLCK G++ NA  L   +   G+ P  +TY+I++ G C+ GK E   D L
Sbjct: 502 GVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNGKAE---DLL 558

Query: 497 LYMEKNGCAPNVVTFNTLMHGF 518
               + G   +   + +L+  +
Sbjct: 559 KLRNEKGLIVDYAYYTSLVSEY 580



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 114/357 (31%), Positives = 195/357 (54%), Gaps = 5/357 (1%)

Query: 196 YSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEML 255
           Y+I+I+  CKEG +  AK +F E++ RG+ P  V   TLI+G C + N +E   L   M 
Sbjct: 226 YNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRLKKTME 285

Query: 256 DLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRID 315
           +    P++ T++V+I  LCK G+++ A  L + M QRGL P+  T+ +L+DG C   RID
Sbjct: 286 ENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQCRSRRID 345

Query: 316 TAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLL 375
           +A   +  M + G K  +V YN L+NG CK+ +V +A  L  ++   G++   ITY TL+
Sbjct: 346 SAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMRMVGMKPDKITYTTLI 405

Query: 376 SGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFE 435
            G  + G    A ++   M    V  D   +  LI G C++  V++A +    +     +
Sbjct: 406 DGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMK 465

Query: 436 FGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDF 495
                +  +IDG CK G +   ++L  ++   G  P V+TY+++++GLC++G+++ AN  
Sbjct: 466 PDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANML 525

Query: 496 LLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVV 552
           L  M   G  P+ +T+N L+ G  +N K   +++L +     E+ L+ D   ++ +V
Sbjct: 526 LEAMLNLGVTPDDITYNILLEGHCKNGKAEDLLKLRN-----EKGLIVDYAYYTSLV 577



 Score =  185 bits (469), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 112/353 (31%), Positives = 177/353 (50%), Gaps = 13/353 (3%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
           P +  +N+L     K          + ++   GL P  ++ N LIN       GLC    
Sbjct: 221 PKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLIN-------GLCKSRN 273

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
           + E   L K M    + PDV TY  LI+G C+ G L VA +L  +M     + GL  + N
Sbjct: 274 LDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEM----QQRGL--RPN 327

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
             +++ +ID  C+   +D A   + +M   G+ P +V+  TL++G C  G+  +   L  
Sbjct: 328 GITFTALIDGQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVD 387

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
           EM  +G +P+ +T+  +ID  CK G +  A  + + M + G+  D   + +L+ G+C  G
Sbjct: 388 EMRMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDG 447

Query: 313 RIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYN 372
           R+  A      M   G K    +Y ++I+GYCK  NV+    L +++  NG +  VITYN
Sbjct: 448 RVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYN 507

Query: 373 TLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKL 425
            L++GL + GQ   A  L + M    V PD  TYNIL++G CKN   ++ +KL
Sbjct: 508 VLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNGKAEDLLKL 560



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 112/361 (31%), Positives = 184/361 (50%), Gaps = 16/361 (4%)

Query: 37  PETQL-NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVI 95
           P+ Q  N  +++ CK G I   +A+  F  +      P   SFN L   + K+R+ D   
Sbjct: 221 PKVQYYNILINKFCKEGSIR--DAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGF 278

Query: 96  SFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITY 155
              + +    + PD  T ++LI+       GLC E R+  A  LF  M   G+RP+ IT+
Sbjct: 279 RLKKTMEENRIYPDVFTYSVLIH-------GLCKEGRLDVAEQLFDEMQQRGLRPNGITF 331

Query: 156 GTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKEL 215
             LI+G CR+  +  A+  + +M++      +  K ++  Y+ +++ LCK G V+KA++L
Sbjct: 332 TALIDGQCRSRRIDSAMNTYHQMLT------MGVKPDLVMYNTLLNGLCKVGDVNKARKL 385

Query: 216 FLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCK 275
             EM+  G+ P  +  TTLI G+C  G+ E    +   M + G   + + F  +I   C+
Sbjct: 386 VDEMRMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCR 445

Query: 276 GGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVS 335
            G++ +A   L  M++ G+ PD  TY  ++DGYC  G +    ++   M   G K  V++
Sbjct: 446 DGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVIT 505

Query: 336 YNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMK 395
           YN+L+NG CK   ++ A  L   +++ GV    ITYN LL G  + G+A    KL +E  
Sbjct: 506 YNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNGKAEDLLKLRNEKG 565

Query: 396 L 396
           L
Sbjct: 566 L 566



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 84/265 (31%), Positives = 146/265 (55%), Gaps = 2/265 (0%)

Query: 289 MIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILN 348
           +++ G  P    YN L++ +C  G I  A+ IF  +  +G + T VS+N LING CK  N
Sbjct: 214 ILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRN 273

Query: 349 VEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNI 408
           ++E   L + +  N +   V TY+ L+ GL + G+   A++LFDEM+   + P+  T+  
Sbjct: 274 LDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTA 333

Query: 409 LIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKG 468
           LIDG C++  +  A+  +H +     +  + ++N L++GLCK G ++ A +L  ++   G
Sbjct: 334 LIDGQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMRMVG 393

Query: 469 LVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVV 528
           + P  +TY+ +I G C++G LE A +    M + G   + V F  L+ GF ++ +     
Sbjct: 394 MKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAE 453

Query: 529 ELLHKMAEPERNLVPDDTTFSIVVD 553
             L +M E    + PDD T+++V+D
Sbjct: 454 RTLREMVEA--GMKPDDATYTMVID 476



 Score =  119 bits (297), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 77/300 (25%), Positives = 149/300 (49%), Gaps = 8/300 (2%)

Query: 273 LCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHT 332
           + + GK + A+    ++   G     F +++LM  Y   G +  A + F  + +   +  
Sbjct: 128 VSRKGKDSAASVFAAILDTAGTRCSNFVFDALMIAYWDSGFVSDAIQCFRLVRNSNFQIP 187

Query: 333 VVSYNILINGYCKILNVEEAMSL---YRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQK 389
                 L++   K++N    +++   Y +I+  G    V  YN L++   + G    A+ 
Sbjct: 188 FHGCGYLLD---KMINSNSPVTIWTFYSEILEYGFPPKVQYYNILINKFCKEGSIRDAKL 244

Query: 390 LFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLC 449
           +F+E++   + P   ++N LI+GLCK+  + E  +L   +E N+    +  ++ LI GLC
Sbjct: 245 IFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLC 304

Query: 450 KAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVV 509
           K GRLD A +LF ++ Q+GL P  +T++ +I G CR  +++ A +    M   G  P++V
Sbjct: 305 KEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQCRSRRIDSAMNTYHQMLTMGVKPDLV 364

Query: 510 TFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSK 569
            +NTL++G  +    +K  +L+ +M      + PD  T++ ++D   K+        + K
Sbjct: 365 MYNTLLNGLCKVGDVNKARKLVDEMRMV--GMKPDKITYTTLIDGYCKEGDLESAMEIRK 422


>gi|18415314|ref|NP_567587.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|334186696|ref|NP_001190771.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|15810161|gb|AAL07224.1| unknown protein [Arabidopsis thaliana]
 gi|332658782|gb|AEE84182.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332658783|gb|AEE84183.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 825

 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 167/572 (29%), Positives = 267/572 (46%), Gaps = 39/572 (6%)

Query: 10  LFSSETVSKVKLSSLFKSPR---------QIAAVSSPE-----TQLNEFLHENCKSGIIN 55
           +F S+T   + L+SL ++            +    SP+     T +N F    CK G   
Sbjct: 222 MFPSKTTCNILLTSLVRANEFQKCCEAFDVVCKGVSPDVYLFTTAINAF----CKGG--K 275

Query: 56  LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNI 115
           + EA   F  M     +P + +FN +   +     YD    F  K+V  G+ P  +T +I
Sbjct: 276 VEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSI 335

Query: 116 LINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLH 175
           L+       +GL    RI +A ++ K M   G  P+VI Y  LI+ F   G+L+ A+ + 
Sbjct: 336 LV-------KGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIK 388

Query: 176 KKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLI 235
             MVS      L S T    Y+ +I   CK G  D A+ L  EM   G N      T++I
Sbjct: 389 DLMVSKGL--SLTSST----YNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVI 442

Query: 236 HGFCCAGNWEEVNGLFIEML--DLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRG 293
              C    ++       EML  ++ P   LLT   +I  LCK GK ++A  L    + +G
Sbjct: 443 CLLCSHLMFDSALRFVGEMLLRNMSPGGGLLT--TLISGLCKHGKHSKALELWFQFLNKG 500

Query: 294 LNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAM 353
              D  T N+L+ G C  G++D A  I   +  +GC    VSYN LI+G C    ++EA 
Sbjct: 501 FVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAF 560

Query: 354 SLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGL 413
               +++  G++    TY+ L+ GLF   +   A + +D+ K   + PD+ TY+++IDG 
Sbjct: 561 MFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGC 620

Query: 414 CKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTV 473
           CK    +E  + F  +     +    ++N LI   C++GRL  A EL   +  KG+ P  
Sbjct: 621 CKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNS 680

Query: 474 VTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHK 533
            TY+ +I G+    ++E+A      M   G  PNV  +  L+ G+ +  +  KV  LL +
Sbjct: 681 ATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLRE 740

Query: 534 MAEPERNLVPDDTTFSIVVDLLAKDEKYHECS 565
           M    +N+ P+  T+++++   A+D    E S
Sbjct: 741 MH--SKNVHPNKITYTVMIGGYARDGNVTEAS 770



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 107/369 (28%), Positives = 176/369 (47%), Gaps = 13/369 (3%)

Query: 56  LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNI 115
            + A  F G M     SP       L   + K+  +   +  + + ++ G + D  T N 
Sbjct: 451 FDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNA 510

Query: 116 LINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLH 175
           L++       GLC   ++ EA  + K ++  G   D ++Y TLI+G C    L  A    
Sbjct: 511 LLH-------GLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFL 563

Query: 176 KKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLI 235
            +MV    + GL  K + ++YSI+I  L     V++A + + + K  G+ P V   + +I
Sbjct: 564 DEMV----KRGL--KPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMI 617

Query: 236 HGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLN 295
            G C A   EE    F EM+    +PN + +N +I   C+ G+++ A  L E M  +G++
Sbjct: 618 DGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGIS 677

Query: 296 PDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSL 355
           P+  TY SL+ G  ++ R++ A+ +F  M  +G +  V  Y  LI+GY K+  + +   L
Sbjct: 678 PNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECL 737

Query: 356 YRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCK 415
            R++ S  V    ITY  ++ G  + G    A +L +EM+   + PD  TY   I G  K
Sbjct: 738 LREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLK 797

Query: 416 NNCVQEAVK 424
              V EA K
Sbjct: 798 QGGVLEAFK 806



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 86/315 (27%), Positives = 143/315 (45%), Gaps = 13/315 (4%)

Query: 79  NLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATW 138
           N L   + +    D      ++++  G + D ++ N LI+       G C + ++ EA  
Sbjct: 509 NALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLIS-------GCCGKKKLDEAFM 561

Query: 139 LFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSI 198
               M+  G++PD  TY  LI G      +  A++           NG++   ++++YS+
Sbjct: 562 FLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDC----KRNGMLP--DVYTYSV 615

Query: 199 IIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLG 258
           +ID  CK    ++ +E F EM  + + P  VV   LI  +C +G       L  +M   G
Sbjct: 616 MIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKG 675

Query: 259 PRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAR 318
             PN  T+  +I  +    ++ EA  L E M   GL P+ F Y +L+DGY  +G++    
Sbjct: 676 ISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVE 735

Query: 319 EIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGL 378
            +   MHSK      ++Y ++I GY +  NV EA  L  ++   G+    ITY   + G 
Sbjct: 736 CLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGY 795

Query: 379 FQAGQAGYAQKLFDE 393
            + G    A K  DE
Sbjct: 796 LKQGGVLEAFKGSDE 810


>gi|357477483|ref|XP_003609027.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355510082|gb|AES91224.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 583

 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 168/579 (29%), Positives = 277/579 (47%), Gaps = 70/579 (12%)

Query: 13  SETVSKVKLSSLFKSPRQIAAVSSPETQLNEFLHENCKSGII----NLNEARYFFGYMTH 68
           SE +SK   S L    R    V+ P T L++ L+    S ++      ++  Y   Y   
Sbjct: 24  SELLSKQHWSELKPHLR----VTKPATFLDQLLNAGVDSELVLRFFKWSQKEYRLSY--G 77

Query: 69  MQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLV----------------------SIGL 106
           ++P+  +  F      +A ++ Y  V SF    V                      +  L
Sbjct: 78  LEPTSKVLHF------LANSKRYSKVRSFLDSFVKNEKHTVSSVFHSLLLDGGRPGATAL 131

Query: 107 LPDFLTL----NILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGF 162
           + D L L    N+ ++C                A   F     +G +  + +   L++  
Sbjct: 132 IIDMLVLAYVKNLELHC----------------AYEAFTRAKDYGFKLSLTSCNPLLSAL 175

Query: 163 CRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGR 222
            +   +     ++K+M+           TN+ +++I I+ LC+ G ++KA++   +MK  
Sbjct: 176 VKENKIGDVEYVYKEMIKRRIH------TNLNTFNIFINGLCRAGKLNKAEDAIEDMKAW 229

Query: 223 GINPAVVVCTTLIHGFC---CAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKI 279
           GI+P VV   TL+ G+C    AG   +      EML     PN +TFN +ID  CK   +
Sbjct: 230 GISPNVVTYNTLVDGYCKRGSAGKMYKAEAFMKEMLANKICPNEVTFNTLIDGFCKDENV 289

Query: 280 NEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNIL 339
             A    E M ++GL P+  TYNSL++G C  G+++ A +++  M   G K  +V+YN L
Sbjct: 290 AAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNAL 349

Query: 340 INGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNV 399
           ING+CK   ++EA  ++  +    +   VIT+NT++    + G       L   M    +
Sbjct: 350 INGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGI 409

Query: 400 EPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWE 459
            P++STYN LI GLC+   +Q A +L + +E    +  +  +N LIDGLCK  +  NA +
Sbjct: 410 LPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNILIDGLCKNDKSRNAEK 469

Query: 460 LFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFL 519
           L +++   GL P  VTY+ ++ G C +GKL+ A +    MEK    PNVVT+N L+ G+ 
Sbjct: 470 LLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALNVRTRMEKERKQPNVVTYNVLIKGYC 529

Query: 520 QNNKTSKVVELLHKMAEPERNLVPDDTTFSIV-VDLLAK 557
           + NK      LL++M   E+ L P+ TT+ IV +++L K
Sbjct: 530 KINKLEAANGLLNEML--EKGLNPNRTTYDIVRLEMLEK 566



 Score =  215 bits (548), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 127/415 (30%), Positives = 229/415 (55%), Gaps = 14/415 (3%)

Query: 75  ISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIK 134
           ++S N L  A+ K      V   Y++++   +  +  T NI IN       GLC   ++ 
Sbjct: 165 LTSCNPLLSALVKENKIGDVEYVYKEMIKRRIHTNLNTFNIFIN-------GLCRAGKLN 217

Query: 135 EATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKT--N 192
           +A    ++M A+G+ P+V+TY TL++G+C+ G+   A +++K       +  L +K   N
Sbjct: 218 KAEDAIEDMKAWGISPNVVTYNTLVDGYCKRGS---AGKMYK--AEAFMKEMLANKICPN 272

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
             +++ +ID  CK+  V  AK+ F EM+ +G+ P +V   +LI+G C  G  EE   L+ 
Sbjct: 273 EVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWD 332

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
           +M+ LG +PN++T+N +I+  CK   + EA  + + + ++ L P+  T+N+++D YC  G
Sbjct: 333 KMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEG 392

Query: 313 RIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYN 372
            ++    +  SM  +G    V +YN LI G C+  +++ A  L  ++ + G++  V+TYN
Sbjct: 393 MMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYN 452

Query: 373 TLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMN 432
            L+ GL +  ++  A+KL +EM    ++P+  TYN L+DG C    ++ A+ +   +E  
Sbjct: 453 ILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALNVRTRMEKE 512

Query: 433 KFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKG 487
           + +  +  +N LI G CK  +L+ A  L +++ +KGL P   TY I+   +  KG
Sbjct: 513 RKQPNVVTYNVLIKGYCKINKLEAANGLLNEMLEKGLNPNRTTYDIVRLEMLEKG 567



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 105/335 (31%), Positives = 172/335 (51%), Gaps = 14/335 (4%)

Query: 49  CKSGII-NLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLL 107
           CK G    + +A  F   M   +  P   +FN L     K+ +  A    + ++   GL 
Sbjct: 246 CKRGSAGKMYKAEAFMKEMLANKICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLK 305

Query: 108 PDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGN 167
           P+ +T N LIN       GLC   +++EA  L+  M+  G++P+++TY  LINGFC+   
Sbjct: 306 PNIVTYNSLIN-------GLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKM 358

Query: 168 LSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPA 227
           +  A ++   +   +    L+   N+ +++ +ID+ CKEG++++   L   M   GI P 
Sbjct: 359 MKEATKVFDDVSKQE----LVP--NVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPN 412

Query: 228 VVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLE 287
           V     LI G C   + +    L  EM + G + +++T+N++ID LCK  K   A  LL 
Sbjct: 413 VSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNILIDGLCKNDKSRNAEKLLN 472

Query: 288 LMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKIL 347
            M   GL P+  TYN+LMDGYC+ G++  A  +   M  +  +  VV+YN+LI GYCKI 
Sbjct: 473 EMFNLGLKPNHVTYNTLMDGYCMEGKLKAALNVRTRMEKERKQPNVVTYNVLIKGYCKIN 532

Query: 348 NVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAG 382
            +E A  L  +++  G+     TY+ +   + + G
Sbjct: 533 KLEAANGLLNEMLEKGLNPNRTTYDIVRLEMLEKG 567



 Score =  132 bits (333), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 82/258 (31%), Positives = 138/258 (53%), Gaps = 9/258 (3%)

Query: 317 AREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLS 376
           A E F      G K ++ S N L++   K   + +   +Y+++I   +   + T+N  ++
Sbjct: 149 AYEAFTRAKDYGFKLSLTSCNPLLSALVKENKIGDVEYVYKEMIKRRIHTNLNTFNIFIN 208

Query: 377 GLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKL-FHMLEM--NK 433
           GL +AG+   A+   ++MK + + P++ TYN L+DG CK     +  K    M EM  NK
Sbjct: 209 GLCRAGKLNKAEDAIEDMKAWGISPNVVTYNTLVDGYCKRGSAGKMYKAEAFMKEMLANK 268

Query: 434 FEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKAN 493
                  FN LIDG CK   +  A + F ++ ++GL P +VTY+ +I+GLC  GKLE+A 
Sbjct: 269 ICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAI 328

Query: 494 DFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
           D    M   G  PN+VT+N L++GF +     +  ++   +++ E  LVP+  TF+ ++D
Sbjct: 329 DLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQE--LVPNVITFNTMID 386

Query: 554 LLAK----DEKYHECSAV 567
              K    +E +  CS++
Sbjct: 387 AYCKEGMMEEGFSLCSSM 404



 Score = 72.4 bits (176), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 45/154 (29%), Positives = 83/154 (53%), Gaps = 1/154 (0%)

Query: 407 NILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQ 466
           ++L+    KN  +  A + F   +   F+  +   N L+  L K  ++ +   ++ ++ +
Sbjct: 134 DMLVLAYVKNLELHCAYEAFTRAKDYGFKLSLTSCNPLLSALVKENKIGDVEYVYKEMIK 193

Query: 467 KGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSK 526
           + +   + T++I I+GLCR GKL KA D +  M+  G +PNVVT+NTL+ G+ +     K
Sbjct: 194 RRIHTNLNTFNIFINGLCRAGKLNKAEDAIEDMKAWGISPNVVTYNTLVDGYCKRGSAGK 253

Query: 527 VVELLHKMAEPERNLV-PDDTTFSIVVDLLAKDE 559
           + +    M E   N + P++ TF+ ++D   KDE
Sbjct: 254 MYKAEAFMKEMLANKICPNEVTFNTLIDGFCKDE 287


>gi|3080374|emb|CAA18631.1| putative protein [Arabidopsis thaliana]
 gi|7268739|emb|CAB78946.1| putative protein [Arabidopsis thaliana]
          Length = 814

 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 167/572 (29%), Positives = 267/572 (46%), Gaps = 39/572 (6%)

Query: 10  LFSSETVSKVKLSSLFKSPR---------QIAAVSSPE-----TQLNEFLHENCKSGIIN 55
           +F S+T   + L+SL ++            +    SP+     T +N F    CK G   
Sbjct: 211 MFPSKTTCNILLTSLVRANEFQKCCEAFDVVCKGVSPDVYLFTTAINAF----CKGG--K 264

Query: 56  LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNI 115
           + EA   F  M     +P + +FN +   +     YD    F  K+V  G+ P  +T +I
Sbjct: 265 VEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSI 324

Query: 116 LINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLH 175
           L+       +GL    RI +A ++ K M   G  P+VI Y  LI+ F   G+L+ A+ + 
Sbjct: 325 LV-------KGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIK 377

Query: 176 KKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLI 235
             MVS      L S T    Y+ +I   CK G  D A+ L  EM   G N      T++I
Sbjct: 378 DLMVSKGL--SLTSST----YNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVI 431

Query: 236 HGFCCAGNWEEVNGLFIEML--DLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRG 293
              C    ++       EML  ++ P   LLT   +I  LCK GK ++A  L    + +G
Sbjct: 432 CLLCSHLMFDSALRFVGEMLLRNMSPGGGLLT--TLISGLCKHGKHSKALELWFQFLNKG 489

Query: 294 LNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAM 353
              D  T N+L+ G C  G++D A  I   +  +GC    VSYN LI+G C    ++EA 
Sbjct: 490 FVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAF 549

Query: 354 SLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGL 413
               +++  G++    TY+ L+ GLF   +   A + +D+ K   + PD+ TY+++IDG 
Sbjct: 550 MFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGC 609

Query: 414 CKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTV 473
           CK    +E  + F  +     +    ++N LI   C++GRL  A EL   +  KG+ P  
Sbjct: 610 CKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNS 669

Query: 474 VTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHK 533
            TY+ +I G+    ++E+A      M   G  PNV  +  L+ G+ +  +  KV  LL +
Sbjct: 670 ATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLRE 729

Query: 534 MAEPERNLVPDDTTFSIVVDLLAKDEKYHECS 565
           M    +N+ P+  T+++++   A+D    E S
Sbjct: 730 MH--SKNVHPNKITYTVMIGGYARDGNVTEAS 759



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 107/369 (28%), Positives = 176/369 (47%), Gaps = 13/369 (3%)

Query: 56  LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNI 115
            + A  F G M     SP       L   + K+  +   +  + + ++ G + D  T N 
Sbjct: 440 FDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNA 499

Query: 116 LINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLH 175
           L++       GLC   ++ EA  + K ++  G   D ++Y TLI+G C    L  A    
Sbjct: 500 LLH-------GLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFL 552

Query: 176 KKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLI 235
            +MV    + GL  K + ++YSI+I  L     V++A + + + K  G+ P V   + +I
Sbjct: 553 DEMV----KRGL--KPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMI 606

Query: 236 HGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLN 295
            G C A   EE    F EM+    +PN + +N +I   C+ G+++ A  L E M  +G++
Sbjct: 607 DGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGIS 666

Query: 296 PDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSL 355
           P+  TY SL+ G  ++ R++ A+ +F  M  +G +  V  Y  LI+GY K+  + +   L
Sbjct: 667 PNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECL 726

Query: 356 YRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCK 415
            R++ S  V    ITY  ++ G  + G    A +L +EM+   + PD  TY   I G  K
Sbjct: 727 LREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLK 786

Query: 416 NNCVQEAVK 424
              V EA K
Sbjct: 787 QGGVLEAFK 795



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 86/315 (27%), Positives = 143/315 (45%), Gaps = 13/315 (4%)

Query: 79  NLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATW 138
           N L   + +    D      ++++  G + D ++ N LI+       G C + ++ EA  
Sbjct: 498 NALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLIS-------GCCGKKKLDEAFM 550

Query: 139 LFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSI 198
               M+  G++PD  TY  LI G      +  A++           NG++   ++++YS+
Sbjct: 551 FLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDC----KRNGMLP--DVYTYSV 604

Query: 199 IIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLG 258
           +ID  CK    ++ +E F EM  + + P  VV   LI  +C +G       L  +M   G
Sbjct: 605 MIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKG 664

Query: 259 PRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAR 318
             PN  T+  +I  +    ++ EA  L E M   GL P+ F Y +L+DGY  +G++    
Sbjct: 665 ISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVE 724

Query: 319 EIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGL 378
            +   MHSK      ++Y ++I GY +  NV EA  L  ++   G+    ITY   + G 
Sbjct: 725 CLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGY 784

Query: 379 FQAGQAGYAQKLFDE 393
            + G    A K  DE
Sbjct: 785 LKQGGVLEAFKGSDE 799


>gi|359497112|ref|XP_003635427.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Vitis vinifera]
          Length = 740

 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 149/524 (28%), Positives = 259/524 (49%), Gaps = 26/524 (4%)

Query: 41  LNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRK 100
           L+  L  NC   + N+      F  M     SP + +F ++  A+      D+  +  + 
Sbjct: 207 LDVLLAGNCPKVVPNV------FYEMLSKGISPTVYTFGVVMKALCLVNEVDSACALLKD 260

Query: 101 LVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLIN 160
           +   G +P+ +    LI+        L    R+ E   L + M+  G  PDV T+   I+
Sbjct: 261 MTRHGCVPNAIVYQTLIH-------ALSKVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIH 313

Query: 161 GFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMK 220
           G C+   +  A +L  +M+   +        N F+Y +++  LC+ G VD+A+ L  ++ 
Sbjct: 314 GLCKMLRIHEAAKLVDRMLLRGF------TPNSFTYGVLMHGLCRMGKVDEARMLLNKVP 367

Query: 221 GRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIE-MLDLGPRPNLLTFNVMIDCLCKGGKI 279
               NP VV+  TLI+G+   G  +E   +  E ML +G  P++ T+N +I  LCK G +
Sbjct: 368 ----NPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYL 423

Query: 280 NEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNIL 339
             A  L+  M  +G  P+  TY  L+D +C  GR++ AR +   M  KG     V YN L
Sbjct: 424 VSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCL 483

Query: 340 INGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNV 399
           I+  CK   V++A++++  + S G +  + T+N+L+ GL +  +   A  L+ +M L  V
Sbjct: 484 ISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGV 543

Query: 400 EPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWE 459
             +  TYN LI    +   +QEA+KL + +           +N LI  LC+AG ++    
Sbjct: 544 IANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLA 603

Query: 460 LFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFL 519
           LF  +  KGL P  ++ +I+I+GLCR G ++ A +FL  M   G  P++VT+N+L++G  
Sbjct: 604 LFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLC 663

Query: 520 QNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
           +  +  + + L  K+      + PD  T++ ++    K+  + +
Sbjct: 664 KTGRAQEALNLFDKLQ--VEGICPDAITYNTLISWHCKEGMFDD 705



 Score =  218 bits (555), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 147/481 (30%), Positives = 233/481 (48%), Gaps = 33/481 (6%)

Query: 66  MTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKER 125
           MT     P    +  L  A++K    + V+    +++ +G +PD       +N F +   
Sbjct: 261 MTRHGCVPNAIVYQTLIHALSKVGRVNEVLKLLEEMLLMGCIPD-------VNTFNDAIH 313

Query: 126 GLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYE- 184
           GLC   RI EA  L   M+  G  P+  TYG L++G CR G +  A  L  K+ + +   
Sbjct: 314 GLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVPNPNVVL 373

Query: 185 -----NGLISK--------------------TNIFSYSIIIDSLCKEGLVDKAKELFLEM 219
                NG +S+                     +IF+Y+ +I  LCK+G +  A+EL  EM
Sbjct: 374 FNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEM 433

Query: 220 KGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKI 279
           + +G  P V+  T LI  FC  G  EE   +  EM   G   N + +N +I  LCK  K+
Sbjct: 434 QIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKV 493

Query: 280 NEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNIL 339
            +A  +   M  +G  PD FT+NSL+ G C V + + A  ++  M  +G     ++YN L
Sbjct: 494 QDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTL 553

Query: 340 INGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNV 399
           I+ + +   ++EA+ L   ++  G     ITYN L+  L +AG       LF++M    +
Sbjct: 554 IHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGL 613

Query: 400 EPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWE 459
            P+  + NILI+GLC+   +Q A++    +        I  +N LI+GLCK GR   A  
Sbjct: 614 NPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALN 673

Query: 460 LFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFL 519
           LF KL  +G+ P  +TY+ +I   C++G  + A+  L     +G  PN VT+  L+  F+
Sbjct: 674 LFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFI 733

Query: 520 Q 520
           +
Sbjct: 734 K 734



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 135/452 (29%), Positives = 225/452 (49%), Gaps = 22/452 (4%)

Query: 41  LNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRK 100
            N+ +H  CK  ++ ++EA      M     +P   ++ +L   + +    D       K
Sbjct: 308 FNDAIHGLCK--MLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNK 365

Query: 101 LVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEA-TWLFKNMIAFGVRPDVITYGTLI 159
           + +    P+ +  N LIN  G   RG     R+ EA   + ++M++ G  PD+ TY TLI
Sbjct: 366 VPN----PNVVLFNTLIN--GYVSRG-----RLDEAKAVMHESMLSVGCGPDIFTYNTLI 414

Query: 160 NGFCRTGNLSVALRLHKKM-VSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLE 218
            G C+ G L  A  L  +M + G        + N+ +Y+I+ID  CKEG +++A+ +  E
Sbjct: 415 LGLCKKGYLVSARELMNEMQIKG-------CEPNVITYTILIDRFCKEGRLEEARNVLDE 467

Query: 219 MKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGK 278
           M G+G+    V    LI   C     ++   +F +M   G +P++ TFN +I  LCK  K
Sbjct: 468 MSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNK 527

Query: 279 INEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNI 338
             EA GL + M+  G+  +  TYN+L+  +   G +  A ++   M  +GC    ++YN 
Sbjct: 528 FEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNG 587

Query: 339 LINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYN 398
           LI   C+  N+E+ ++L+  ++S G+    I+ N L++GL + G   +A +   +M    
Sbjct: 588 LIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRG 647

Query: 399 VEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAW 458
           + PD+ TYN LI+GLCK    QEA+ LF  L++         +N LI   CK G  D+A 
Sbjct: 648 LTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAH 707

Query: 459 ELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLE 490
            L  +    G +P  VT+ I++    ++G  E
Sbjct: 708 LLLSRGVDSGFIPNEVTWYILVSNFIKEGDQE 739



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 103/370 (27%), Positives = 176/370 (47%), Gaps = 8/370 (2%)

Query: 196 YSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEML 255
           Y ++ID L   G       L ++MK  GI     +   ++  +  AG   +   L ++M 
Sbjct: 132 YYMLIDKLGAAGEFKTTDALLMQMKQEGIVFRESLFILIMKHYGRAGLPGQATRLLLDMR 191

Query: 256 DL-GPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRI 314
            +    P   ++NV++D L  G        +   M+ +G++P  +T+  +M   CLV  +
Sbjct: 192 GVYSCEPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFGVVMKALCLVNEV 251

Query: 315 DTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTL 374
           D+A  +   M   GC    + Y  LI+   K+  V E + L  +++  G    V T+N  
Sbjct: 252 DSACALLKDMTRHGCVPNAIVYQTLIHALSKVGRVNEVLKLLEEMLLMGCIPDVNTFNDA 311

Query: 375 LSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKF 434
           + GL +  +   A KL D M L    P+  TY +L+ GLC+   V EA  L + +     
Sbjct: 312 IHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVP---- 367

Query: 435 EFGIEIFNCLIDGLCKAGRLDNAWELFHK-LPQKGLVPTVVTYSIMIHGLCRKGKLEKAN 493
              + +FN LI+G    GRLD A  + H+ +   G  P + TY+ +I GLC+KG L  A 
Sbjct: 368 NPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSAR 427

Query: 494 DFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
           + +  M+  GC PNV+T+  L+  F +  +  +   +L +M+   + L  +   ++ ++ 
Sbjct: 428 ELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMS--GKGLALNAVGYNCLIS 485

Query: 554 LLAKDEKYHE 563
            L KDEK  +
Sbjct: 486 ALCKDEKVQD 495



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 61/252 (24%), Positives = 115/252 (45%), Gaps = 4/252 (1%)

Query: 314 IDTAREIF-LSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYN 372
           + T+ E+F  +   KG  H    Y +LI+        +   +L  Q+   G+      + 
Sbjct: 109 VPTSMELFQWAGTQKGYCHMFDVYYMLIDKLGAAGEFKTTDALLMQMKQEGIVFRESLFI 168

Query: 373 TLLSGLFQAGQAGYAQKLFDEMK-LYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
            ++    +AG  G A +L  +M+ +Y+ EP   +YN+++D L   NC +    +F+ +  
Sbjct: 169 LIMKHYGRAGLPGQATRLLLDMRGVYSCEPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLS 228

Query: 432 NKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEK 491
                 +  F  ++  LC    +D+A  L   + + G VP  + Y  +IH L + G++ +
Sbjct: 229 KGISPTVYTFGVVMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALSKVGRVNE 288

Query: 492 ANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIV 551
               L  M   GC P+V TFN  +HG  +  +  +  +L+ +M    R   P+  T+ ++
Sbjct: 289 VLKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRML--LRGFTPNSFTYGVL 346

Query: 552 VDLLAKDEKYHE 563
           +  L +  K  E
Sbjct: 347 MHGLCRMGKVDE 358


>gi|125602942|gb|EAZ42267.1| hypothetical protein OsJ_26834 [Oryza sativa Japonica Group]
          Length = 1088

 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 145/482 (30%), Positives = 240/482 (49%), Gaps = 17/482 (3%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
           P +  +N +  A+ K+ +     +  +K+    + PD  T   +I        G C ++ 
Sbjct: 383 PNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMI-------LGHCRKHD 435

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
           +  A  +F  M   G  P+ +TY TLING C +G ++ A  L ++M+     +G++   +
Sbjct: 436 LDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMIL----HGILPTAH 491

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
             +  II  +LC  G  + A  LF++MK +G  P V   T LI G C +G  +   GLF 
Sbjct: 492 TCTGPII--ALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFH 549

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
            M   G  PN +T+N +I+ L +  +I  A  +L LM + GL  +  TYN ++ GYC++G
Sbjct: 550 RMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILG 609

Query: 313 RIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYN 372
               A  +  +M  +G    +V+YN +I GYC   N   A+ +   +   G +    +Y 
Sbjct: 610 DPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYT 669

Query: 373 TLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMN 432
            L+ G  +  +   A  LF+EM    + P+  TY  LIDG CK+  +  A  L   ++ +
Sbjct: 670 ELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRS 729

Query: 433 KFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKA 492
                ++ +N LI GL K      A EL   + ++G+ P VVTY+ MI GLC+ G    A
Sbjct: 730 GCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLA 789

Query: 493 NDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERN-LVPDDTTFSIV 551
            +    M + GC PN++T+++L+    Q  K  +   L    AE ER+ L+PD+ T+  +
Sbjct: 790 LEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLF---AELERHGLIPDEITYVKM 846

Query: 552 VD 553
           ++
Sbjct: 847 IE 848



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 132/453 (29%), Positives = 221/453 (48%), Gaps = 31/453 (6%)

Query: 140 FKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKT-------- 191
           +  M++ GV+P+++ Y  +IN  C+ GN++ A  + KK+   +      + T        
Sbjct: 373 YHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCR 432

Query: 192 ---------------------NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVV 230
                                N  +YS +I+ LC  G V++A +L  EM   GI P    
Sbjct: 433 KHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHT 492

Query: 231 CTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMI 290
           CT  I   C  G +E+   LF++M + G  PN+ T+  +I  LC  G +  A GL   M 
Sbjct: 493 CTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMS 552

Query: 291 QRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVE 350
           + G+ P+  TYN+L++      RI  A  +   M   G    +V+YN +I GYC + + +
Sbjct: 553 RDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPK 612

Query: 351 EAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILI 410
           +AM +   ++  G    ++TYNT++ G   +G    A ++ D M+    +PD  +Y  LI
Sbjct: 613 KAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELI 672

Query: 411 DGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLV 470
            G CK + ++ A  LF+ +  +        +  LIDG CK  +LD A  L   + + G  
Sbjct: 673 CGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCR 732

Query: 471 PTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVEL 530
           P V TY+++IHGL ++     A +    M + G  PNVVT+  ++ G  +N  TS  +E+
Sbjct: 733 PNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEM 792

Query: 531 LHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
            +KM   E+  +P+  T+S ++  L ++ K  E
Sbjct: 793 FNKMI--EQGCLPNLLTYSSLIRALGQEGKVEE 823



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 145/536 (27%), Positives = 241/536 (44%), Gaps = 45/536 (8%)

Query: 49   CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
            C SG++ +  A   F  M+     P   ++N L   + +NR           +   GL  
Sbjct: 536  CVSGLLKV--AIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGLFT 593

Query: 109  DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
            + +T N +I       +G C+    K+A  +  NM+  G   +++TY T+I G+C +GN 
Sbjct: 594  NIVTYNEMI-------KGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNT 646

Query: 169  SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
            + ALR+   M  G        K + +SY+ +I   CK   ++ A  LF EM   G+ P  
Sbjct: 647  TSALRILDLMRDGG------CKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNE 700

Query: 229  VVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLEL 288
            V  T LI G+C     +    L   M   G RPN+ T+NV+I  L K    + A  L ++
Sbjct: 701  VTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKV 760

Query: 289  MIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILN 348
            MI+ G+ P+  TY +++DG C  G    A E+F  M  +GC   +++Y+ LI    +   
Sbjct: 761  MIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGK 820

Query: 349  VEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNI 408
            VEEA +L+ ++  +G+    ITY  ++     +G+  +A      M     +P L TY +
Sbjct: 821  VEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGV 880

Query: 409  LIDGLCKN-----------------NCV-------QEAVKLFHMLEMNKFEFG--IEIFN 442
            LI GL KN                 NC        Q+AV +    ++ + + G  +++ N
Sbjct: 881  LIKGL-KNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSA-KLAELDPGLSVQVQN 938

Query: 443  CLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKN 502
             L+  L  AGR   A EL   +  +GL P    Y+ ++  L R   ++ A     +M   
Sbjct: 939  ALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQ 998

Query: 503  GCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKD 558
            GC  ++  +  L+    Q ++  +       M    R   PDD   ++++D L +D
Sbjct: 999  GCEVHLNGYKELICALCQLHRRKEARITFENML--MRTWNPDDVVQAVLIDGLLRD 1052



 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 113/413 (27%), Positives = 186/413 (45%), Gaps = 30/413 (7%)

Query: 126  GLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYEN 185
            G C  ++++ A  LF  M+  G+ P+ +TY  LI+G+C+   L  A  L + M       
Sbjct: 674  GFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSG--- 730

Query: 186  GLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWE 245
                + N+ +Y+++I  L K+     A+EL   M   GI P VV  T +I G C  G+  
Sbjct: 731  ---CRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTS 787

Query: 246  EVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLM 305
                +F +M++ G  PNLLT++ +I  L + GK+ EA  L   + + GL PD  TY  ++
Sbjct: 788  LALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMI 847

Query: 306  DGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYC-KILNVEEAMSLYRQIISN-- 362
            + Y + G+++ A      M   GC+ T+ +Y +LI G   + L  ++ ++    ++ N  
Sbjct: 848  EAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCS 907

Query: 363  -GVRQT--------------------VITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEP 401
             G + T                    V   N L+S L  AG+   A +L   M    + P
Sbjct: 908  FGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCP 967

Query: 402  DLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELF 461
            D   YN L+  L +   V  A+ +F  +     E  +  +  LI  LC+  R   A   F
Sbjct: 968  DQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITF 1027

Query: 462  HKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTL 514
              +  +   P  V  +++I GL R G  +   +FL  ME     P+   +  L
Sbjct: 1028 ENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETRRYMPSFHIYTIL 1080



 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 126/469 (26%), Positives = 193/469 (41%), Gaps = 39/469 (8%)

Query: 42   NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
            N  +   C SG  N   A      M      P   S+  L     K    ++    + ++
Sbjct: 634  NTIIKGYCDSG--NTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEM 691

Query: 102  VSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLING 161
            V  GL P+ +T   LI+       G C + ++  AT L ++M   G RP+V TY  LI+G
Sbjct: 692  VDDGLCPNEVTYTALID-------GYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHG 744

Query: 162  FCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKG 221
              +  N S A  L K M+    E G+    N+ +Y+ +ID LCK G    A E+F +M  
Sbjct: 745  LTKQNNFSGAEELCKVMI----EEGIFP--NVVTYTAMIDGLCKNGSTSLALEMFNKMIE 798

Query: 222  RGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINE 281
            +G  P ++  ++LI      G  EE   LF E+   G  P+ +T+  MI+     GK+  
Sbjct: 799  QGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEH 858

Query: 282  ANGLLELMIQRGLNPDRFTYNSLMDGY--------------------CLVGRIDTAREIF 321
            A   L  MI+ G  P  +TY  L+ G                     C  G   T ++  
Sbjct: 859  AFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAV 918

Query: 322  LSMHSKGCKH----TVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSG 377
              M +K  +     +V   N L++         EA  L   +IS G+      YN+LL  
Sbjct: 919  SVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCS 978

Query: 378  LFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFG 437
            L +      A  +F  M     E  L+ Y  LI  LC+ +  +EA   F  + M  +   
Sbjct: 979  LLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPD 1038

Query: 438  IEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRK 486
              +   LIDGL + G  D   E  H +  +  +P+   Y+I+     +K
Sbjct: 1039 DVVQAVLIDGLLRDGYKDLCMEFLHIMETRRYMPSFHIYTILAREASKK 1087



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 56/243 (23%), Positives = 109/243 (44%), Gaps = 37/243 (15%)

Query: 353 MSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDG 412
           MS    +  +G+R  +  Y+ LL  L + G        +  M    V+P+L  YN +I+ 
Sbjct: 335 MSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINA 394

Query: 413 LCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPT 472
           LCK+  V +A  +   +  ++       +  +I G C+   LD+A ++F+++ ++G  P 
Sbjct: 395 LCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPN 454

Query: 473 VVTYSIMIHGLCRKGKLEKANDFL-----------------------------------L 497
            VTYS +I+GLC  G++ +A D +                                   +
Sbjct: 455 TVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFV 514

Query: 498 YMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAK 557
            M+  GC PNV T+  L+ G   +      + L H+M+     + P+  T++ ++++L +
Sbjct: 515 DMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRD--GVFPNTVTYNALINILVE 572

Query: 558 DEK 560
           + +
Sbjct: 573 NRR 575



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 27/155 (17%), Positives = 73/155 (47%), Gaps = 2/155 (1%)

Query: 409 LIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKG 468
           LI        +   +    ML  +    G+  ++ L+  L + G      + +H++  +G
Sbjct: 321 LIKSCHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEG 380

Query: 469 LVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVV 528
           + P ++ Y+ +I+ LC+ G +  A   +  + ++  +P+  T+ +++ G  + +     +
Sbjct: 381 VQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSAL 440

Query: 529 ELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
           ++ ++MA  +    P+  T+S +++ L    + +E
Sbjct: 441 QVFNQMA--KEGCEPNTVTYSTLINGLCDSGRVNE 473


>gi|223635621|sp|Q940A6.2|PP325_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g19440, chloroplastic; Flags: Precursor
          Length = 838

 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 167/572 (29%), Positives = 267/572 (46%), Gaps = 39/572 (6%)

Query: 10  LFSSETVSKVKLSSLFKSPR---------QIAAVSSPE-----TQLNEFLHENCKSGIIN 55
           +F S+T   + L+SL ++            +    SP+     T +N F    CK G   
Sbjct: 235 MFPSKTTCNILLTSLVRANEFQKCCEAFDVVCKGVSPDVYLFTTAINAF----CKGG--K 288

Query: 56  LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNI 115
           + EA   F  M     +P + +FN +   +     YD    F  K+V  G+ P  +T +I
Sbjct: 289 VEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSI 348

Query: 116 LINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLH 175
           L+       +GL    RI +A ++ K M   G  P+VI Y  LI+ F   G+L+ A+ + 
Sbjct: 349 LV-------KGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIK 401

Query: 176 KKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLI 235
             MVS      L S T    Y+ +I   CK G  D A+ L  EM   G N      T++I
Sbjct: 402 DLMVSKGL--SLTSST----YNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVI 455

Query: 236 HGFCCAGNWEEVNGLFIEML--DLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRG 293
              C    ++       EML  ++ P   LLT   +I  LCK GK ++A  L    + +G
Sbjct: 456 CLLCSHLMFDSALRFVGEMLLRNMSPGGGLLT--TLISGLCKHGKHSKALELWFQFLNKG 513

Query: 294 LNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAM 353
              D  T N+L+ G C  G++D A  I   +  +GC    VSYN LI+G C    ++EA 
Sbjct: 514 FVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAF 573

Query: 354 SLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGL 413
               +++  G++    TY+ L+ GLF   +   A + +D+ K   + PD+ TY+++IDG 
Sbjct: 574 MFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGC 633

Query: 414 CKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTV 473
           CK    +E  + F  +     +    ++N LI   C++GRL  A EL   +  KG+ P  
Sbjct: 634 CKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNS 693

Query: 474 VTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHK 533
            TY+ +I G+    ++E+A      M   G  PNV  +  L+ G+ +  +  KV  LL +
Sbjct: 694 ATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLRE 753

Query: 534 MAEPERNLVPDDTTFSIVVDLLAKDEKYHECS 565
           M    +N+ P+  T+++++   A+D    E S
Sbjct: 754 MH--SKNVHPNKITYTVMIGGYARDGNVTEAS 783



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 107/369 (28%), Positives = 176/369 (47%), Gaps = 13/369 (3%)

Query: 56  LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNI 115
            + A  F G M     SP       L   + K+  +   +  + + ++ G + D  T N 
Sbjct: 464 FDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNA 523

Query: 116 LINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLH 175
           L++       GLC   ++ EA  + K ++  G   D ++Y TLI+G C    L  A    
Sbjct: 524 LLH-------GLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFL 576

Query: 176 KKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLI 235
            +MV    + GL  K + ++YSI+I  L     V++A + + + K  G+ P V   + +I
Sbjct: 577 DEMV----KRGL--KPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMI 630

Query: 236 HGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLN 295
            G C A   EE    F EM+    +PN + +N +I   C+ G+++ A  L E M  +G++
Sbjct: 631 DGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGIS 690

Query: 296 PDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSL 355
           P+  TY SL+ G  ++ R++ A+ +F  M  +G +  V  Y  LI+GY K+  + +   L
Sbjct: 691 PNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECL 750

Query: 356 YRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCK 415
            R++ S  V    ITY  ++ G  + G    A +L +EM+   + PD  TY   I G  K
Sbjct: 751 LREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLK 810

Query: 416 NNCVQEAVK 424
              V EA K
Sbjct: 811 QGGVLEAFK 819



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 86/315 (27%), Positives = 143/315 (45%), Gaps = 13/315 (4%)

Query: 79  NLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATW 138
           N L   + +    D      ++++  G + D ++ N LI+       G C + ++ EA  
Sbjct: 522 NALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLIS-------GCCGKKKLDEAFM 574

Query: 139 LFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSI 198
               M+  G++PD  TY  LI G      +  A++           NG++   ++++YS+
Sbjct: 575 FLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDC----KRNGMLP--DVYTYSV 628

Query: 199 IIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLG 258
           +ID  CK    ++ +E F EM  + + P  VV   LI  +C +G       L  +M   G
Sbjct: 629 MIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKG 688

Query: 259 PRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAR 318
             PN  T+  +I  +    ++ EA  L E M   GL P+ F Y +L+DGY  +G++    
Sbjct: 689 ISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVE 748

Query: 319 EIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGL 378
            +   MHSK      ++Y ++I GY +  NV EA  L  ++   G+    ITY   + G 
Sbjct: 749 CLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGY 808

Query: 379 FQAGQAGYAQKLFDE 393
            + G    A K  DE
Sbjct: 809 LKQGGVLEAFKGSDE 823


>gi|346703736|emb|CBX24404.1| hypothetical_protein [Oryza glaberrima]
          Length = 1765

 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 141/488 (28%), Positives = 241/488 (49%), Gaps = 15/488 (3%)

Query: 73   PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
            P ++  N L   + + R +D     Y +++      D  +  +L+       RGLC+E R
Sbjct: 1110 PEVTHCNRLLKLLVEQRRWDDARKLYDEMLGKDSGADNYSTCVLV-------RGLCLERR 1162

Query: 133  IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
            ++E   L +     G  P V+ Y  LI+G+CR G++   L L  +M +  +   L++   
Sbjct: 1163 VEEGLKLIEARWGAGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMETKGFLPTLVT--- 1219

Query: 193  IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
               Y  +I+ L K+G ++K   LFLEM+ RG +P V +  ++I   C   +  +   +  
Sbjct: 1220 ---YGSLINWLGKKGDLEKIGSLFLEMRKRGFSPNVQIYNSVIDALCKCRSATQAMVILK 1276

Query: 253  EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
            +M   G  P+++TFN +I  LC  G + +A   L   I+R LNP++ +Y  L+ G+C+ G
Sbjct: 1277 QMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRG 1336

Query: 313  RIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYN 372
             +  A ++ + M  +G    VV++  LI+G      V EA+ +  ++    V   V  YN
Sbjct: 1337 ELMVASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYN 1396

Query: 373  TLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMN 432
             L+SGL +      A+ + +EM   NV+PD   Y  LIDG  ++  + +A K+F  +E  
Sbjct: 1397 VLISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHK 1456

Query: 433  KFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKA 492
                 I   N +I G C+ G +  A      + + G +P   TY+ +I G  ++G L  A
Sbjct: 1457 GICPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGA 1516

Query: 493  NDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVV 552
              +L  M K  C PNVVT+++L++G+ +   T     L   M      L P+  T++I++
Sbjct: 1517 LRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDFAEGLFANMQ--AEALSPNVVTYTILI 1574

Query: 553  DLLAKDEK 560
              L K +K
Sbjct: 1575 GSLFKKDK 1582



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 130/465 (27%), Positives = 218/465 (46%), Gaps = 19/465 (4%)

Query: 54   INLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTL 113
            + L EAR+  G + H      +  +N+L     +       +    ++ + G LP  +T 
Sbjct: 1167 LKLIEARWGAGCIPH------VVFYNVLIDGYCRRGDMGRGLLLLGEMETKGFLPTLVTY 1220

Query: 114  NILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALR 173
              LIN  G K         +++   LF  M   G  P+V  Y ++I+  C+  + + A+ 
Sbjct: 1221 GSLINWLGKK-------GDLEKIGSLFLEMRKRGFSPNVQIYNSVIDALCKCRSATQAMV 1273

Query: 174  LHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTT 233
            + K+M +   +       +I +++ +I  LC EG V KA+    E   R +NP  +  T 
Sbjct: 1274 ILKQMFASGCD------PDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTP 1327

Query: 234  LIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRG 293
            LIHGFC  G     + L +EM+  G  P+++TF  +I  L   GK++EA  + E M +R 
Sbjct: 1328 LIHGFCMRGELMVASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQ 1387

Query: 294  LNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAM 353
            + PD   YN L+ G C    +  A+ I   M  K  +     Y  LI+G+ +  N+ +A 
Sbjct: 1388 VFPDVNIYNVLISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDAR 1447

Query: 354  SLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGL 413
             ++  +   G+   +++ N ++ G  Q G    A      M+     PD  TY  +I G 
Sbjct: 1448 KIFEFMEHKGICPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGY 1507

Query: 414  CKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTV 473
             K   +  A++    +   K +  +  ++ LI+G CK G  D A  LF  +  + L P V
Sbjct: 1508 AKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDFAEGLFANMQAEALSPNV 1567

Query: 474  VTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGF 518
            VTY+I+I  L +K K+ +A  +   M  N C+PN VT + L++G 
Sbjct: 1568 VTYTILIGSLFKKDKVLRAGLYFETMLLNHCSPNDVTLHYLVNGL 1612



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 145/526 (27%), Positives = 227/526 (43%), Gaps = 65/526 (12%)

Query: 49   CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
            C+ G  ++       G M      P + ++  L   + K    + + S + ++   G  P
Sbjct: 1193 CRRG--DMGRGLLLLGEMETKGFLPTLVTYGSLINWLGKKGDLEKIGSLFLEMRKRGFSP 1250

Query: 109  DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
            +    N +I+        LC      +A  + K M A G  PD+IT+ TLI G C  G++
Sbjct: 1251 NVQIYNSVID-------ALCKCRSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHV 1303

Query: 169  SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
              A    ++ +  +         N  SY+ +I   C  G +  A +L +EM GRG  P V
Sbjct: 1304 RKAEHFLREAIRREL------NPNQLSYTPLIHGFCMRGELMVASDLLVEMMGRGHTPDV 1357

Query: 229  VVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLEL 288
            V    LIHG   AG   E   +  +M +    P++  +NV+I  LCK   +  A  +LE 
Sbjct: 1358 VTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKRMLPAAKNILEE 1417

Query: 289  MIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILN 348
            M+++ + PD F Y +L+DG+     +  AR+IF  M  KG    +VS N +I GYC+   
Sbjct: 1418 MLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGICPDIVSCNAMIKGYCQFGM 1477

Query: 349  VEEA---MS------------LYRQIISNGVRQ--------------------TVITYNT 373
            + EA   MS             Y  +IS   +Q                     V+TY++
Sbjct: 1478 MSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSS 1537

Query: 374  LLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNK 433
            L++G  + G   +A+ LF  M+   + P++ TY ILI  L K + V  A   F  + +N 
Sbjct: 1538 LINGYCKTGDTDFAEGLFANMQAEALSPNVVTYTILIGSLFKKDKVLRAGLYFETMLLNH 1597

Query: 434  FEFGIEIFNCLIDGL------------CKAGRL---DNAWELFHKLPQKGLVPTVVTYSI 478
                    + L++GL            C    +   D    +F KL      P    Y+ 
Sbjct: 1598 CSPNDVTLHYLVNGLTSCTPCVINSICCNTSEVHGKDALLVVFKKLVFDIGDPRNSAYNA 1657

Query: 479  MIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKT 524
            +I  LCR   L +A DF   M K G  PN +TF +L++GF    K+
Sbjct: 1658 IIFSLCRHNMLREALDFKNRMAKKGYVPNPITFLSLLYGFCSVGKS 1703



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 94/349 (26%), Positives = 168/349 (48%), Gaps = 3/349 (0%)

Query: 210  DKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLD-LGPRPNLLTFNV 268
            D   +    M   G  P       L+  +  AG   +   +   + +  G  P +   N 
Sbjct: 1058 DAVDDTLQSMSLAGAAPTRACLGALVAAYADAGMLGKATKMCERVREQYGSLPEVTHCNR 1117

Query: 269  MIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKG 328
            ++  L +  + ++A  L + M+ +    D ++   L+ G CL  R++   ++  +    G
Sbjct: 1118 LLKLLVEQRRWDDARKLYDEMLGKDSGADNYSTCVLVRGLCLERRVEEGLKLIEARWGAG 1177

Query: 329  CKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQ 388
            C   VV YN+LI+GYC+  ++   + L  ++ + G   T++TY +L++ L + G      
Sbjct: 1178 CIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMETKGFLPTLVTYGSLINWLGKKGDLEKIG 1237

Query: 389  KLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGL 448
             LF EM+     P++  YN +ID LCK     +A+ +   +  +  +  I  FN LI GL
Sbjct: 1238 SLFLEMRKRGFSPNVQIYNSVIDALCKCRSATQAMVILKQMFASGCDPDIITFNTLITGL 1297

Query: 449  CKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNV 508
            C  G +  A     +  ++ L P  ++Y+ +IHG C +G+L  A+D L+ M   G  P+V
Sbjct: 1298 CHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMVASDLLVEMMGRGHTPDV 1357

Query: 509  VTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAK 557
            VTF  L+HG +   K S+ + +  KM   ER + PD   +++++  L K
Sbjct: 1358 VTFGALIHGLVVAGKVSEALIVREKMT--ERQVFPDVNIYNVLISGLCK 1404



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 86/326 (26%), Positives = 139/326 (42%), Gaps = 37/326 (11%)

Query: 40   QLNEFLHENCKSGII---NLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVIS 96
            Q +EF++     G I   NL +AR  F +M H    P I S N +     +       I 
Sbjct: 1424 QPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGICPDIVSCNAMIKGYCQFGMMSEAIL 1483

Query: 97   FYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYG 156
                +  +G +PD  T   +I+       G   +  +  A     +MI    +P+V+TY 
Sbjct: 1484 CMSNMRKVGCIPDEFTYTTVIS-------GYAKQGNLNGALRWLCDMIKRKCKPNVVTYS 1536

Query: 157  TLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELF 216
            +LING+C+TG+   A  L   M +           N+ +Y+I+I SL K+  V +A   F
Sbjct: 1537 SLINGYCKTGDTDFAEGLFANMQAEALS------PNVVTYTILIGSLFKKDKVLRAGLYF 1590

Query: 217  LEMKGRGINPAVVVCTTLIHGF-----------CCAGNWEEVNG------LFIEML-DLG 258
              M     +P  V    L++G            CC  N  EV+G      +F +++ D+G
Sbjct: 1591 ETMLLNHCSPNDVTLHYLVNGLTSCTPCVINSICC--NTSEVHGKDALLVVFKKLVFDIG 1648

Query: 259  PRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAR 318
              P    +N +I  LC+   + EA      M ++G  P+  T+ SL+ G+C VG+    R
Sbjct: 1649 D-PRNSAYNAIIFSLCRHNMLREALDFKNRMAKKGYVPNPITFLSLLYGFCSVGKSVNWR 1707

Query: 319  EIFLSMHSKGCKHTVVSYNILINGYC 344
             I  +   +     +  Y  L + Y 
Sbjct: 1708 TILPNEFQQEEFEIIFRYKFLFDQYA 1733


>gi|357517409|ref|XP_003628993.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355523015|gb|AET03469.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 819

 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 148/537 (27%), Positives = 260/537 (48%), Gaps = 46/537 (8%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CKSG   L EA  F G M   + +P + ++ +L   + K   +D   S   ++ S G  P
Sbjct: 287 CKSG--RLEEALMFKGRMVENKVNPSLVTYGILVNGLVKFEKFDEANSVLVEMYSKGFSP 344

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           +    N LI+ +  K         + +A  +  +M   G++P+ +T+ TL+ GFCRT  +
Sbjct: 345 NEFVFNALIDGYSRK-------GNMDDALRVRDDMTLKGLKPNAVTHNTLLQGFCRTNQM 397

Query: 169 SVALRLHKKMVSG---------DYENGLISKTNIFSYSIII------------DSL---- 203
             A ++ + ++S           Y   L+ K++ F  ++ I            DSL    
Sbjct: 398 EQAEQVLEYLLSNVLSVNEDACSYVLHLLCKSSKFDSALKIVKALLLRNIKVNDSLLTLL 457

Query: 204 ----CKEGLVDKAKELFLEMKGR-GINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLG 258
               CK G   +A +L+  +  + G+         L++G C  GN EEV  +  EM++ G
Sbjct: 458 VCGLCKCGKHLEAIDLWFRLADKKGLAANTTTSNALLYGLCERGNMEEVFPVCKEMVERG 517

Query: 259 PRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAR 318
              + +++N +I   CK GKI EA  L E M+++G  PD +TYN LM G    G++D   
Sbjct: 518 LVLDGISYNTLIFGCCKSGKIEEAFKLKEKMMKQGFKPDTYTYNFLMKGLADKGKMDDVG 577

Query: 319 EIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGL 378
            +       G    + +Y +++ GYC    ++ A+SL+ +++ N V  + + YN L++  
Sbjct: 578 RVLHEAKDHGVVPNIYTYALMLEGYCNADRIDNAVSLFNKLVYNKVELSYVVYNILIAAH 637

Query: 379 FQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGI 438
            +AG    A KL D M+  N+ P + TY+ +I G+C N+ V+EA  +F  +        +
Sbjct: 638 SKAGNFTEAFKLRDAMRSSNIHPTIFTYSSIIHGMCCNDLVEEAKGIFEEMRNEGLMPNV 697

Query: 439 EIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLY 498
             +  LI G CK G++D    +  ++    + P  +TY+IMI G C+ G  ++A   L  
Sbjct: 698 FCYTALIGGYCKLGQMDQIESILQEMTSNCIQPNKITYTIMIDGYCKMGNTKEATKLLNE 757

Query: 499 MEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLL 555
           M  NG +P+ VT+  L  G+ + N+       L +  + +  +  ++ T++ +VD L
Sbjct: 758 MIANGISPDTVTYTVLQKGYCKENE-------LEETLQGDTAVPLEEITYTTLVDKL 807



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 121/422 (28%), Positives = 219/422 (51%), Gaps = 16/422 (3%)

Query: 138 WLFKNMIAF---GVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIF 194
           W F   + F   GV P + +   L++   ++  L  + R+   M  G    G++   +++
Sbjct: 189 WAFDTFMLFTSKGVFPSLKSCNFLMSSLVKSNELHKSFRVFDAMCRG----GVL--IDVY 242

Query: 195 SYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEM 254
           +Y+  I++ CK G +D+A  LFL+M   G+ P VV    LI G C +G  EE       M
Sbjct: 243 TYATAINAYCKGGKIDEAVGLFLKMGEGGVLPNVVTYNNLIDGLCKSGRLEEALMFKGRM 302

Query: 255 LDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRI 314
           ++    P+L+T+ ++++ L K  K +EAN +L  M  +G +P+ F +N+L+DGY   G +
Sbjct: 303 VENKVNPSLVTYGILVNGLVKFEKFDEANSVLVEMYSKGFSPNEFVFNALIDGYSRKGNM 362

Query: 315 DTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISN--GVRQTVITYN 372
           D A  +   M  KG K   V++N L+ G+C+   +E+A  +   ++SN   V +   +Y 
Sbjct: 363 DDALRVRDDMTLKGLKPNAVTHNTLLQGFCRTNQMEQAEQVLEYLLSNVLSVNEDACSY- 421

Query: 373 TLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKL-FHMLEM 431
            +L  L ++ +   A K+   + L N++ + S   +L+ GLCK     EA+ L F + + 
Sbjct: 422 -VLHLLCKSSKFDSALKIVKALLLRNIKVNDSLLTLLVCGLCKCGKHLEAIDLWFRLADK 480

Query: 432 NKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEK 491
                     N L+ GLC+ G ++  + +  ++ ++GLV   ++Y+ +I G C+ GK+E+
Sbjct: 481 KGLAANTTTSNALLYGLCERGNMEEVFPVCKEMVERGLVLDGISYNTLIFGCCKSGKIEE 540

Query: 492 ANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIV 551
           A      M K G  P+  T+N LM G     K   V  +LH+    +  +VP+  T++++
Sbjct: 541 AFKLKEKMMKQGFKPDTYTYNFLMKGLADKGKMDDVGRVLHE--AKDHGVVPNIYTYALM 598

Query: 552 VD 553
           ++
Sbjct: 599 LE 600



 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 141/552 (25%), Positives = 238/552 (43%), Gaps = 86/552 (15%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
           P + S N L  ++ K+         +  +   G+L D  T    IN +       C   +
Sbjct: 204 PSLKSCNFLMSSLVKSNELHKSFRVFDAMCRGGVLIDVYTYATAINAY-------CKGGK 256

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
           I EA  LF  M   GV P+V+TY  LI+G C++G L  AL    +MV       L+    
Sbjct: 257 IDEAVGLFLKMGEGGVLPNVVTYNNLIDGLCKSGRLEEALMFKGRMVENKVNPSLV---- 312

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
             +Y I+++ L K    D+A  + +EM  +G +P   V   LI G+   GN ++   +  
Sbjct: 313 --TYGILVNGLVKFEKFDEANSVLVEMYSKGFSPNEFVFNALIDGYSRKGNMDDALRVRD 370

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGL--NPDRFTY--------- 301
           +M   G +PN +T N ++   C+  ++ +A  +LE ++   L  N D  +Y         
Sbjct: 371 DMTLKGLKPNAVTHNTLLQGFCRTNQMEQAEQVLEYLLSNVLSVNEDACSYVLHLLCKSS 430

Query: 302 --------------------NSLMD----GYCLVGRIDTAREIFLSM-HSKGCKHTVVSY 336
                               +SL+     G C  G+   A +++  +   KG      + 
Sbjct: 431 KFDSALKIVKALLLRNIKVNDSLLTLLVCGLCKCGKHLEAIDLWFRLADKKGLAANTTTS 490

Query: 337 NILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKL 396
           N L+ G C+  N+EE   + ++++  G+    I+YNTL+ G  ++G+   A KL ++M  
Sbjct: 491 NALLYGLCERGNMEEVFPVCKEMVERGLVLDGISYNTLIFGCCKSGKIEEAFKLKEKMMK 550

Query: 397 YNVEPDLSTYNILIDGL-----------------------------------CKNNCVQE 421
              +PD  TYN L+ GL                                   C  + +  
Sbjct: 551 QGFKPDTYTYNFLMKGLADKGKMDDVGRVLHEAKDHGVVPNIYTYALMLEGYCNADRIDN 610

Query: 422 AVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIH 481
           AV LF+ L  NK E    ++N LI    KAG    A++L   +    + PT+ TYS +IH
Sbjct: 611 AVSLFNKLVYNKVELSYVVYNILIAAHSKAGNFTEAFKLRDAMRSSNIHPTIFTYSSIIH 670

Query: 482 GLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNL 541
           G+C    +E+A      M   G  PNV  +  L+ G+ +  +  ++  +L +M      +
Sbjct: 671 GMCCNDLVEEAKGIFEEMRNEGLMPNVFCYTALIGGYCKLGQMDQIESILQEMT--SNCI 728

Query: 542 VPDDTTFSIVVD 553
            P+  T++I++D
Sbjct: 729 QPNKITYTIMID 740


>gi|242047602|ref|XP_002461547.1| hypothetical protein SORBIDRAFT_02g004530 [Sorghum bicolor]
 gi|241924924|gb|EER98068.1| hypothetical protein SORBIDRAFT_02g004530 [Sorghum bicolor]
          Length = 696

 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 162/557 (29%), Positives = 265/557 (47%), Gaps = 72/557 (12%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           C +G +NL  A       T ++ +  ++   LL    A+ R  DA+    R++  +G  P
Sbjct: 155 CDAGCLNLGFAALGQIIKTGLR-AQAVTFTPLLRTLCAEKRTSDAMNIVLRRMPELGCTP 213

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFG--VRPDVITYGTLINGFCRTG 166
           D  +   L+       +GLC E + +EA  L   M   G    P+V++Y T+I+GF + G
Sbjct: 214 DVFSYTTLL-------KGLCAEKKCEEAAELIHMMAEDGDNCPPNVVSYTTVIHGFFKEG 266

Query: 167 NLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINP 226
           ++  A  L  KM+    ++G+    N+ + + +ID LCK   +DKA+ +  +M    I P
Sbjct: 267 DVGKAYTLFCKML----DHGI--PPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMP 320

Query: 227 AVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLL 286
                 +LIHG+  +G W E   +  EM   G RPN++T++++IDCLCK G   EA  + 
Sbjct: 321 NCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYSMLIDCLCKSGLHAEAREIF 380

Query: 287 ELMIQRGLNPDRFTYNSLMDG-----------------------------------YCLV 311
             MIQ G  P+  TY SL+ G                                   YC  
Sbjct: 381 NSMIQSGQKPNASTYGSLLHGYATEGNLVDMNNVKDLMVQNGMRPGRHVFNIEIYAYCKC 440

Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
           GR+D A   F  M  +G    +V+Y  +I+G CKI  +++AMS + Q+I +G+   +IT+
Sbjct: 441 GRLDEASLTFNKMQQQGFMPDIVAYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPDIITF 500

Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
           NTL+ G    G+   A++LF EM    + P+++T+N +ID L K   V EA KLF ++  
Sbjct: 501 NTLIHGFALHGKWEKAEELFYEMMDRGIPPNVNTFNSMIDKLFKEGKVTEARKLFDLMPR 560

Query: 432 NKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEK 491
              +  +  +N +I G   AG +    +L   +   GL PT VT++ ++ G         
Sbjct: 561 AGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKPTAVTFNTLLDG--------- 611

Query: 492 ANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKM-AEPERNLVPDDTTFSI 550
                  M   G  P+VVT  TL+    ++ +   ++ L  +M  + ++    D  T +I
Sbjct: 612 -------MVSMGLKPDVVTCKTLIDSCCEDGRIEDILTLFREMLGKADKT---DTITENI 661

Query: 551 VVDLLAKDEKYHECSAV 567
            +  +     YH CS+V
Sbjct: 662 KLRGVTVKASYH-CSSV 677



 Score =  221 bits (563), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 159/553 (28%), Positives = 251/553 (45%), Gaps = 45/553 (8%)

Query: 40  QLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAV----- 94
           +L +F+ E  +SG +   +A   F  +        I + N L   VA+     +V     
Sbjct: 64  ELEQFIGECYRSGDLGPEDALDLFDELLQRARPGSIYALNQLLTTVARAPVSSSVRDGPA 123

Query: 95  --ISFYRKLVSIG---LLPDFLTLNILINC----------------------------FG 121
             +S + ++   G   + PD  T  ILI+C                            F 
Sbjct: 124 LAVSMFNRMARAGAKKVAPDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRAQAVTFT 183

Query: 122 NKERGLCVENRIKEA-TWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVS 180
              R LC E R  +A   + + M   G  PDV +Y TL+ G C       A  L   M  
Sbjct: 184 PLLRTLCAEKRTSDAMNIVLRRMPELGCTPDVFSYTTLLKGLCAEKKCEEAAELIHMMA- 242

Query: 181 GDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCC 240
              E+G     N+ SY+ +I    KEG V KA  LF +M   GI P VV C ++I G C 
Sbjct: 243 ---EDGDNCPPNVVSYTTVIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCK 299

Query: 241 AGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFT 300
               ++   +  +M+D    PN  T+N +I      G+  EA  +L+ M + G  P+  T
Sbjct: 300 VQAMDKAEAVLQQMIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVT 359

Query: 301 YNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQII 360
           Y+ L+D  C  G    AREIF SM   G K    +Y  L++GY    N+ +  ++   ++
Sbjct: 360 YSMLIDCLCKSGLHAEAREIFNSMIQSGQKPNASTYGSLLHGYATEGNLVDMNNVKDLMV 419

Query: 361 SNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQ 420
            NG+R     +N  +    + G+   A   F++M+     PD+  Y  +IDGLCK   + 
Sbjct: 420 QNGMRPGRHVFNIEIYAYCKCGRLDEASLTFNKMQQQGFMPDIVAYTTVIDGLCKIGRLD 479

Query: 421 EAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMI 480
           +A+  F  +  +     I  FN LI G    G+ + A ELF+++  +G+ P V T++ MI
Sbjct: 480 DAMSRFCQMIDDGLSPDIITFNTLIHGFALHGKWEKAEELFYEMMDRGIPPNVNTFNSMI 539

Query: 481 HGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERN 540
             L ++GK+ +A      M + G  PNVV++NT++HG+    +  +V++LL  M      
Sbjct: 540 DKLFKEGKVTEARKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLI--G 597

Query: 541 LVPDDTTFSIVVD 553
           L P   TF+ ++D
Sbjct: 598 LKPTAVTFNTLLD 610


>gi|147798083|emb|CAN67256.1| hypothetical protein VITISV_039434 [Vitis vinifera]
          Length = 722

 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 149/524 (28%), Positives = 259/524 (49%), Gaps = 26/524 (4%)

Query: 41  LNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRK 100
           L+  L  NC   + N+      F  M     SP + +F ++  A+      D+  +  + 
Sbjct: 189 LDVLLAGNCPKVVPNV------FYEMLSKGISPTVYTFGVVMKALCLVNEVDSACALLKD 242

Query: 101 LVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLIN 160
           +   G +P+ +    LI+        L    R+ E   L + M+  G  PDV T+   I+
Sbjct: 243 MTRHGCVPNAIVYQTLIH-------ALXKVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIH 295

Query: 161 GFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMK 220
           G C+   +  A +L  +M+   +        N F+Y +++  LC+ G VD+A+ L  ++ 
Sbjct: 296 GLCKMLRIHEAAKLVDRMLLRGF------TPNSFTYGVLMHGLCRMGKVDEARMLLNKVP 349

Query: 221 GRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIE-MLDLGPRPNLLTFNVMIDCLCKGGKI 279
               NP VV+  TLI+G+   G  +E   +  E ML +G  P++ T+N +I  LCK G +
Sbjct: 350 ----NPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYL 405

Query: 280 NEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNIL 339
             A  L+  M  +G  P+  TY  L+D +C  GR++ AR +   M  KG     V YN L
Sbjct: 406 VSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCL 465

Query: 340 INGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNV 399
           I+  CK   V++A++++  + S G +  + T+N+L+ GL +  +   A  L+ +M L  V
Sbjct: 466 ISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGV 525

Query: 400 EPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWE 459
             +  TYN LI    +   +QEA+KL + +           +N LI  LC+AG ++    
Sbjct: 526 IANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLA 585

Query: 460 LFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFL 519
           LF  +  KGL P  ++ +I+I+GLCR G ++ A +FL  M   G  P++VT+N+L++G  
Sbjct: 586 LFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLC 645

Query: 520 QNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
           +  +  + + L  K+      + PD  T++ ++    K+  + +
Sbjct: 646 KTGRAQEALNLFDKLQ--VEGICPDAITYNTLISWHCKEGMFDD 687



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 147/481 (30%), Positives = 232/481 (48%), Gaps = 33/481 (6%)

Query: 66  MTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKER 125
           MT     P    +  L  A+ K    + V+    +++ +G +PD       +N F +   
Sbjct: 243 MTRHGCVPNAIVYQTLIHALXKVGRVNEVLKLLEEMLLMGCIPD-------VNTFNDAIH 295

Query: 126 GLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYE- 184
           GLC   RI EA  L   M+  G  P+  TYG L++G CR G +  A  L  K+ + +   
Sbjct: 296 GLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVPNPNVVL 355

Query: 185 -----NGLISK--------------------TNIFSYSIIIDSLCKEGLVDKAKELFLEM 219
                NG +S+                     +IF+Y+ +I  LCK+G +  A+EL  EM
Sbjct: 356 FNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEM 415

Query: 220 KGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKI 279
           + +G  P V+  T LI  FC  G  EE   +  EM   G   N + +N +I  LCK  K+
Sbjct: 416 QIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKV 475

Query: 280 NEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNIL 339
            +A  +   M  +G  PD FT+NSL+ G C V + + A  ++  M  +G     ++YN L
Sbjct: 476 QDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTL 535

Query: 340 INGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNV 399
           I+ + +   ++EA+ L   ++  G     ITYN L+  L +AG       LF++M    +
Sbjct: 536 IHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGL 595

Query: 400 EPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWE 459
            P+  + NILI+GLC+   +Q A++    +        I  +N LI+GLCK GR   A  
Sbjct: 596 NPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALN 655

Query: 460 LFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFL 519
           LF KL  +G+ P  +TY+ +I   C++G  + A+  L     +G  PN VT+  L+  F+
Sbjct: 656 LFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFI 715

Query: 520 Q 520
           +
Sbjct: 716 K 716



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 135/452 (29%), Positives = 225/452 (49%), Gaps = 22/452 (4%)

Query: 41  LNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRK 100
            N+ +H  CK  ++ ++EA      M     +P   ++ +L   + +    D       K
Sbjct: 290 FNDAIHGLCK--MLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNK 347

Query: 101 LVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEA-TWLFKNMIAFGVRPDVITYGTLI 159
           + +    P+ +  N LIN  G   RG     R+ EA   + ++M++ G  PD+ TY TLI
Sbjct: 348 VPN----PNVVLFNTLIN--GYVSRG-----RLDEAKAVMHESMLSVGCGPDIFTYNTLI 396

Query: 160 NGFCRTGNLSVALRLHKKM-VSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLE 218
            G C+ G L  A  L  +M + G        + N+ +Y+I+ID  CKEG +++A+ +  E
Sbjct: 397 LGLCKKGYLVSARELMNEMQIKG-------CEPNVITYTILIDRFCKEGRLEEARNVLDE 449

Query: 219 MKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGK 278
           M G+G+    V    LI   C     ++   +F +M   G +P++ TFN +I  LCK  K
Sbjct: 450 MSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNK 509

Query: 279 INEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNI 338
             EA GL + M+  G+  +  TYN+L+  +   G +  A ++   M  +GC    ++YN 
Sbjct: 510 FEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNG 569

Query: 339 LINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYN 398
           LI   C+  N+E+ ++L+  ++S G+    I+ N L++GL + G   +A +   +M    
Sbjct: 570 LIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRG 629

Query: 399 VEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAW 458
           + PD+ TYN LI+GLCK    QEA+ LF  L++         +N LI   CK G  D+A 
Sbjct: 630 LTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAH 689

Query: 459 ELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLE 490
            L  +    G +P  VT+ I++    ++G  E
Sbjct: 690 LLLSRGVDSGFIPNEVTWYILVSNFIKEGDQE 721



 Score =  109 bits (272), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 87/340 (25%), Positives = 150/340 (44%), Gaps = 43/340 (12%)

Query: 265 TFNVMIDCLCKGGKINEANGLLELMIQRGL------------------------------ 294
            + ++ID L   G+    + LL  M Q G+                              
Sbjct: 113 VYYMLIDKLGAAGEFKTIDALLMQMKQEGIVFRESLFILIMKHYGRAGLPGQATRLLLDM 172

Query: 295 ------NPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILN 348
                  P   +YN ++D             +F  M SKG   TV ++ +++   C +  
Sbjct: 173 RGVYSCEPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFGVVMKALCLVNE 232

Query: 349 VEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNI 408
           V+ A +L + +  +G     I Y TL+  L + G+     KL +EM L    PD++T+N 
Sbjct: 233 VDSACALLKDMTRHGCVPNAIVYQTLIHALXKVGRVNEVLKLLEEMLLMGCIPDVNTFND 292

Query: 409 LIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKG 468
            I GLCK   + EA KL   + +  F      +  L+ GLC+ G++D A  L +K+P   
Sbjct: 293 AIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVPN-- 350

Query: 469 LVPTVVTYSIMIHGLCRKGKLEKANDFLL-YMEKNGCAPNVVTFNTLMHGFLQNNKTSKV 527
             P VV ++ +I+G   +G+L++A   +   M   GC P++ T+NTL+ G  +       
Sbjct: 351 --PNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSA 408

Query: 528 VELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAV 567
            EL+++M    +   P+  T++I++D   K+ +  E   V
Sbjct: 409 RELMNEMQ--IKGCEPNVITYTILIDRFCKEGRLEEARNV 446



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 61/252 (24%), Positives = 115/252 (45%), Gaps = 4/252 (1%)

Query: 314 IDTAREIF-LSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYN 372
           + T+ E+F  +   KG  H    Y +LI+        +   +L  Q+   G+      + 
Sbjct: 91  VPTSMELFQWAGTQKGYCHMFDVYYMLIDKLGAAGEFKTIDALLMQMKQEGIVFRESLFI 150

Query: 373 TLLSGLFQAGQAGYAQKLFDEMK-LYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
            ++    +AG  G A +L  +M+ +Y+ EP   +YN+++D L   NC +    +F+ +  
Sbjct: 151 LIMKHYGRAGLPGQATRLLLDMRGVYSCEPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLS 210

Query: 432 NKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEK 491
                 +  F  ++  LC    +D+A  L   + + G VP  + Y  +IH L + G++ +
Sbjct: 211 KGISPTVYTFGVVMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALXKVGRVNE 270

Query: 492 ANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIV 551
               L  M   GC P+V TFN  +HG  +  +  +  +L+ +M    R   P+  T+ ++
Sbjct: 271 VLKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRML--LRGFTPNSFTYGVL 328

Query: 552 VDLLAKDEKYHE 563
           +  L +  K  E
Sbjct: 329 MHGLCRMGKVDE 340


>gi|296081530|emb|CBI20053.3| unnamed protein product [Vitis vinifera]
          Length = 634

 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 139/487 (28%), Positives = 240/487 (49%), Gaps = 21/487 (4%)

Query: 78  FNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEAT 137
           F+LL     + R  D     +  +   G++P   T N +++ F          NR++ A 
Sbjct: 160 FDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLF-------LKLNRMEMAW 212

Query: 138 WLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYS 197
            L+  M    +   V T+  ++N  C+ G L  A      M       GL  K N+ SY+
Sbjct: 213 VLYAEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFM------EGLGFKPNVVSYN 266

Query: 198 IIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDL 257
            II      G ++ A+ +   M+ +GI P      +LI G C  G  EE +GLF +M+++
Sbjct: 267 TIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEI 326

Query: 258 GPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTA 317
           G  PN +T+N +ID  C  G +  A    + M+++G+ P   TYN L+    + GR+  A
Sbjct: 327 GLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEA 386

Query: 318 REIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSG 377
            ++   M  KG     ++YNILINGY +  N ++A  L+ +++S G+  T +TY +L+  
Sbjct: 387 DDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYV 446

Query: 378 LFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFG 437
           L +  +   A  LF+++    V PD+  +N ++DG C N  V+ A  L   ++       
Sbjct: 447 LSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPD 506

Query: 438 IEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLL 497
              FN L+ G C+ G+++ A  L  ++ ++G+ P  ++Y+ +I G  R+G ++ A     
Sbjct: 507 EVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRD 566

Query: 498 YMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTF-SIV----- 551
            M   G  P ++T+N L+    +N +     ELL +M    + + PDD+T+ S++     
Sbjct: 567 EMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMV--NKGISPDDSTYLSLIEGMGN 624

Query: 552 VDLLAKD 558
           VD L +D
Sbjct: 625 VDTLVED 631



 Score =  202 bits (515), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 132/462 (28%), Positives = 226/462 (48%), Gaps = 13/462 (2%)

Query: 57  NEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNIL 116
           +EA   F  M      P I + N +     K    +     Y ++  + +     T NI+
Sbjct: 174 DEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAEMFRLRISSTVYTFNIM 233

Query: 117 INCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHK 176
           +N        LC E ++K+A      M   G +P+V++Y T+I+G+   GN+  A R+  
Sbjct: 234 VNV-------LCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILD 286

Query: 177 KMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIH 236
            M     E       + ++Y  +I  +CKEG +++A  LF +M   G+ P  V   TLI 
Sbjct: 287 AMRVKGIE------PDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLID 340

Query: 237 GFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNP 296
           G+C  G+ E       EM+  G  P++ T+N+++  L   G++ EA+ +++ M ++G+ P
Sbjct: 341 GYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIP 400

Query: 297 DRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLY 356
           D  TYN L++GY   G    A ++   M SKG + T V+Y  LI    +   ++EA  L+
Sbjct: 401 DAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLF 460

Query: 357 RQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKN 416
            +I+  GV   VI +N ++ G    G    A  L  EM   +V PD  T+N L+ G C+ 
Sbjct: 461 EKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCRE 520

Query: 417 NCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTY 476
             V+EA  L   ++    +     +N LI G  + G + +A+ +  ++   G  PT++TY
Sbjct: 521 GKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTY 580

Query: 477 SIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGF 518
           + +I  LC+  + + A + L  M   G +P+  T+ +L+ G 
Sbjct: 581 NALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGM 622



 Score =  198 bits (503), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 131/450 (29%), Positives = 218/450 (48%), Gaps = 50/450 (11%)

Query: 34  VSSPETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDA 93
           +SS     N  ++  CK G   L +AR F G+M  +   P + S+N +    +   + + 
Sbjct: 223 ISSTVYTFNIMVNVLCKEG--KLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEG 280

Query: 94  VISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVI 153
                  +   G+ PD  T   LI+       G+C E R++EA+ LF  M+  G+ P+ +
Sbjct: 281 ARRILDAMRVKGIEPDSYTYGSLIS-------GMCKEGRLEEASGLFDKMVEIGLVPNAV 333

Query: 154 TYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAK 213
           TY TLI+G+C  G+L  A     +MV    + G++   ++ +Y++++ +L  EG + +A 
Sbjct: 334 TYNTLIDGYCNKGDLERAFSYRDEMV----KKGIMP--SVSTYNLLVHALFMEGRMGEAD 387

Query: 214 ELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCL 273
           ++  EM+ +GI P  +    LI+G+   GN ++   L  EML  G  P  +T+  +I  L
Sbjct: 388 DMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVL 447

Query: 274 CKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTV 333
            +  ++ EA+ L E ++ +G++PD   +N+++DG+C  G ++ A  +   M  K      
Sbjct: 448 SRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDE 507

Query: 334 VSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDE 393
           V++N L+ G C+   VEEA  L  ++   G++   I+YNTL+SG  + G    A ++ DE
Sbjct: 508 VTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDE 567

Query: 394 MKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGR 453
           M      P L TYN LI  LCKN   QE                                
Sbjct: 568 MLSIGFNPTLLTYNALIKCLCKN---QEG------------------------------- 593

Query: 454 LDNAWELFHKLPQKGLVPTVVTYSIMIHGL 483
            D A EL  ++  KG+ P   TY  +I G+
Sbjct: 594 -DLAEELLKEMVNKGISPDDSTYLSLIEGM 622



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 66/261 (25%), Positives = 129/261 (49%), Gaps = 7/261 (2%)

Query: 313 RIDTAREIF----LSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTV 368
           RI T RE+F    LS      K ++V +++L+   C++   +EA   +  +   G+   +
Sbjct: 134 RIATNRELFDELTLSRDRLSVKSSIV-FDLLVRVCCELRRADEAFKCFYMMKEKGIVPKI 192

Query: 369 ITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHM 428
            T N +LS   +  +   A  L+ EM    +   + T+NI+++ LCK   +++A +    
Sbjct: 193 ETCNDMLSLFLKLNRMEMAWVLYAEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGF 252

Query: 429 LEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGK 488
           +E   F+  +  +N +I G    G ++ A  +   +  KG+ P   TY  +I G+C++G+
Sbjct: 253 MEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGR 312

Query: 489 LEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTF 548
           LE+A+     M + G  PN VT+NTL+ G+       +      +M   ++ ++P  +T+
Sbjct: 313 LEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMV--KKGIMPSVSTY 370

Query: 549 SIVVDLLAKDEKYHECSAVSK 569
           +++V  L  + +  E   + K
Sbjct: 371 NLLVHALFMEGRMGEADDMIK 391



 Score = 52.8 bits (125), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 36/130 (27%), Positives = 49/130 (37%), Gaps = 9/130 (6%)

Query: 33  AVSSPETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYD 92
           +V   E   N  +   C+ G   + EAR     M      P   S+N L     +     
Sbjct: 502 SVPPDEVTFNTLMQGRCREG--KVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIK 559

Query: 93  AVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDV 152
                  +++SIG  P  LT N LI C    + G   E        L K M+  G+ PD 
Sbjct: 560 DAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEE-------LLKEMVNKGISPDD 612

Query: 153 ITYGTLINGF 162
            TY +LI G 
Sbjct: 613 STYLSLIEGM 622


>gi|255570715|ref|XP_002526312.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223534393|gb|EEF36101.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 729

 Score =  223 bits (568), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 134/459 (29%), Positives = 237/459 (51%), Gaps = 15/459 (3%)

Query: 95  ISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVIT 154
           +  YR +   G+ P   T N +++ F       C    ++ A  L   M   G  P  +T
Sbjct: 222 LEVYRMMGEYGIRPTVTTYNTMLHSF-------CKGGEVQRALDLVPKMQERGCYPSEVT 274

Query: 155 YGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKE 214
           +  LING  + G L  A  L ++M       GL  + + ++Y+ +I   CK+GL+ +A  
Sbjct: 275 FNVLINGLSKKGELQQAKGLIQEMAKA----GL--RVSPYTYNPLICGYCKKGLLVEALA 328

Query: 215 LFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLC 274
           L+ EM  RG++P V    T+++GFC  G   +      +ML     P+++++N +I   C
Sbjct: 329 LWEEMVTRGVSPTVASHNTIMYGFCKEGKMSDARQQLSDMLKKNLMPDIISYNTLIYGFC 388

Query: 275 KGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVV 334
           + G I EA  LL+ +  R L+ +  TYN+L+DG C +G ++TA ++   M ++G    VV
Sbjct: 389 RLGNIGEAFILLDELRFRNLSFNIVTYNTLIDGLCRLGDLETALKLKEDMINRGIHPDVV 448

Query: 335 SYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEM 394
           +Y +L+NG CK+ N+  A   + +++  G+      Y   + G  + G    A KL +EM
Sbjct: 449 TYTVLVNGACKLGNMLMAKEFFDEMLHVGLAPDQFAYTARIVGELKLGDTAKAFKLQEEM 508

Query: 395 KLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRL 454
                 PD+ TYN+ ++GLCK   ++EA +L   +  +        +   +    + G L
Sbjct: 509 LTKGFPPDVITYNVFVNGLCKLGNLEEAGELLQKMIRDGHVPDHVTYTSFMHAHMENGHL 568

Query: 455 DNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTL 514
               E+F+ +  +G  PTVVTY+++IH     G+L+ A  + L M++ G  PNV+T+N L
Sbjct: 569 REGREIFYDMLSRGQTPTVVTYTVLIHAHALNGRLDWAMAYFLEMQEKGVVPNVITYNVL 628

Query: 515 MHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
           ++GF +  K  +  +   +M   E+ + P+  T++I+++
Sbjct: 629 INGFCKVRKMDQACKFFIEMQ--EKGIFPNKYTYTILIN 665



 Score =  211 bits (538), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 143/488 (29%), Positives = 241/488 (49%), Gaps = 15/488 (3%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
           P ++++N +  +  K       +    K+   G  P  +T N+LIN       GL  +  
Sbjct: 235 PTVTTYNTMLHSFCKGGEVQRALDLVPKMQERGCYPSEVTFNVLIN-------GLSKKGE 287

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
           +++A  L + M   G+R    TY  LI G+C+ G L  AL L ++MV+       +S T 
Sbjct: 288 LQQAKGLIQEMAKAGLRVSPYTYNPLICGYCKKGLLVEALALWEEMVTRG-----VSPT- 341

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
           + S++ I+   CKEG +  A++   +M  + + P ++   TLI+GFC  GN  E   L  
Sbjct: 342 VASHNTIMYGFCKEGKMSDARQQLSDMLKKNLMPDIISYNTLIYGFCRLGNIGEAFILLD 401

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
           E+       N++T+N +ID LC+ G +  A  L E MI RG++PD  TY  L++G C +G
Sbjct: 402 ELRFRNLSFNIVTYNTLIDGLCRLGDLETALKLKEDMINRGIHPDVVTYTVLVNGACKLG 461

Query: 313 RIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYN 372
            +  A+E F  M   G      +Y   I G  K+ +  +A  L  ++++ G    VITYN
Sbjct: 462 NMLMAKEFFDEMLHVGLAPDQFAYTARIVGELKLGDTAKAFKLQEEMLTKGFPPDVITYN 521

Query: 373 TLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMN 432
             ++GL + G    A +L  +M      PD  TY   +    +N  ++E  ++F+ +   
Sbjct: 522 VFVNGLCKLGNLEEAGELLQKMIRDGHVPDHVTYTSFMHAHMENGHLREGREIFYDMLSR 581

Query: 433 KFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKA 492
                +  +  LI      GRLD A   F ++ +KG+VP V+TY+++I+G C+  K+++A
Sbjct: 582 GQTPTVVTYTVLIHAHALNGRLDWAMAYFLEMQEKGVVPNVITYNVLINGFCKVRKMDQA 641

Query: 493 NDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVV 552
             F + M++ G  PN  T+  L++      K  + + L  +M    + + PD  T   ++
Sbjct: 642 CKFFIEMQEKGIFPNKYTYTILINENCNMGKWQEALRLYAQML--GKRIRPDSCTHGALL 699

Query: 553 DLLAKDEK 560
             L KD K
Sbjct: 700 KKLDKDYK 707



 Score = 89.4 bits (220), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 63/216 (29%), Positives = 107/216 (49%), Gaps = 6/216 (2%)

Query: 337 NILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKL 396
           ++LI GY   LN +  + ++ +++ N     V   N +L  L        A +++  M  
Sbjct: 175 DVLIGGY---LNYQ-CLLVFEKMMRNRFLPDVKNCNRILKILRDKNLLVKALEVYRMMGE 230

Query: 397 YNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDN 456
           Y + P ++TYN ++   CK   VQ A+ L   ++          FN LI+GL K G L  
Sbjct: 231 YGIRPTVTTYNTMLHSFCKGGEVQRALDLVPKMQERGCYPSEVTFNVLINGLSKKGELQQ 290

Query: 457 AWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMH 516
           A  L  ++ + GL  +  TY+ +I G C+KG L +A      M   G +P V + NT+M+
Sbjct: 291 AKGLIQEMAKAGLRVSPYTYNPLICGYCKKGLLVEALALWEEMVTRGVSPTVASHNTIMY 350

Query: 517 GFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVV 552
           GF +  K S   + L  M   ++NL+PD  +++ ++
Sbjct: 351 GFCKEGKMSDARQQLSDML--KKNLMPDIISYNTLI 384



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 59/221 (26%), Positives = 109/221 (49%), Gaps = 14/221 (6%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
           P + ++N+    + K  + +      +K++  G +PD +T    ++   + E G      
Sbjct: 515 PDVITYNVFVNGLCKLGNLEEAGELLQKMIRDGHVPDHVTYTSFMH--AHMENG-----H 567

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
           ++E   +F +M++ G  P V+TY  LI+     G L  A+    +M     E G++   N
Sbjct: 568 LREGREIFYDMLSRGQTPTVVTYTVLIHAHALNGRLDWAMAYFLEM----QEKGVVP--N 621

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
           + +Y+++I+  CK   +D+A + F+EM+ +GI P     T LI+  C  G W+E   L+ 
Sbjct: 622 VITYNVLINGFCKVRKMDQACKFFIEMQEKGIFPNKYTYTILINENCNMGKWQEALRLYA 681

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRG 293
           +ML    RP+  T   ++  L K  K+ +A   +E +I  G
Sbjct: 682 QMLGKRIRPDSCTHGALLKKLDKDYKV-QAVQFIESLILDG 721



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 37/167 (22%), Positives = 73/167 (43%), Gaps = 30/167 (17%)

Query: 44  FLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVS 103
           F+H + ++G  +L E R  F  M     +P + ++ +L  A A N   D  ++++ ++  
Sbjct: 558 FMHAHMENG--HLREGREIFYDMLSRGQTPTVVTYTVLIHAHALNGRLDWAMAYFLEMQE 615

Query: 104 IGLLPDFLTLNILINCFGN--------------KERGL--------------CVENRIKE 135
            G++P+ +T N+LIN F                +E+G+              C   + +E
Sbjct: 616 KGVVPNVITYNVLINGFCKVRKMDQACKFFIEMQEKGIFPNKYTYTILINENCNMGKWQE 675

Query: 136 ATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGD 182
           A  L+  M+   +RPD  T+G L+    +   +     +   ++ GD
Sbjct: 676 ALRLYAQMLGKRIRPDSCTHGALLKKLDKDYKVQAVQFIESLILDGD 722


>gi|255551759|ref|XP_002516925.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223544013|gb|EEF45539.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 901

 Score =  223 bits (568), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 161/589 (27%), Positives = 256/589 (43%), Gaps = 67/589 (11%)

Query: 56  LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNI 115
           L+EA   F  M   +  P   ++N +         +D   S   +  + G +P  +  N 
Sbjct: 319 LDEAVEIFEQMEQNRNVPCAYAYNTMIMGYGSAGKFDEAYSLLERQKARGCIPSVIAYNC 378

Query: 116 LINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLH 175
           ++ C G K        R+ EA   F+ M      P++ TY  LI+  C+ G +  A ++ 
Sbjct: 379 ILTCLGKK-------GRLGEALRTFEEMKK-DAAPNLSTYNVLIDMLCKAGEVEAAFKVR 430

Query: 176 KKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLI 235
             M     E GL    N+ + +I+ID LCK   +D+A  +F  M  +  +P  V   +LI
Sbjct: 431 DAM----KEAGLFP--NVMTVNIMIDRLCKAKKLDEACSIFEGMNHKICSPDEVTFCSLI 484

Query: 236 HGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLN 295
            G    G  ++   L+ +MLD    PN + +  +I    K G+  + + + + MI RG +
Sbjct: 485 DGLGKQGRVDDAYRLYEQMLDSDKIPNAVVYTSLIKSFFKCGRKEDGHKIFKEMIHRGCS 544

Query: 296 PDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSL 355
           PD    N+ MD     G     R +F  + S+G    V+SY+ILI+G  K     E   L
Sbjct: 545 PDLRLLNAYMDCVFKAGETGKGRALFEEIKSRGFIPDVMSYSILIHGLVKAGFARETYEL 604

Query: 356 YRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCK 415
           +  +   G       YNT + G  ++G+   A +L +EMK    +P + TY  +IDGL K
Sbjct: 605 FYAMKEQGCVLDTHAYNTFIDGFCKSGKVNKAYQLLEEMKTKGRQPTVVTYGSVIDGLAK 664

Query: 416 NNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTV-- 473
            + + EA  LF   + N  E  + I++ LIDG  K GR+D A+ +  +L QKGL P V  
Sbjct: 665 IDRLDEAYMLFEEAKSNGLELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYT 724

Query: 474 ---------------------------------VTYSIMIHGLCRKGKLEKANDFLLYME 500
                                            +TYSI+I+GLCR  K  KA  F   M+
Sbjct: 725 WNCLLDALVKAEEINEALVCFQNMKNLKGTPNHITYSILINGLCRVRKFNKAFVFWQEMQ 784

Query: 501 KNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEK 560
           K G  PN +T+ T++ G  +    ++   L  +        VPD  +++ +++ L+    
Sbjct: 785 KQGLKPNTITYTTMIAGLAKAGNIAEASSLFERF--KANGGVPDSASYNAIIEGLS---- 838

Query: 561 YHECSAVSKSSYRACLYVTIFQPSSLGSMIGCTVRLMPQPEMSDTLGDD 609
                     S RA     IF+ +    M GC +       + D L  D
Sbjct: 839 ---------YSRRAMEAYKIFEET---RMKGCNIHTKTCIALLDALQKD 875



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 136/512 (26%), Positives = 255/512 (49%), Gaps = 16/512 (3%)

Query: 56  LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNI 115
           L EA   F  M     +P +S++N+L   + K    +A       +   GL P+ +T+NI
Sbjct: 389 LGEALRTFEEMKK-DAAPNLSTYNVLIDMLCKAGEVEAAFKVRDAMKEAGLFPNVMTVNI 447

Query: 116 LINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLH 175
           +I+        LC   ++ EA  +F+ M      PD +T+ +LI+G  + G +  A RL+
Sbjct: 448 MID-------RLCKAKKLDEACSIFEGMNHKICSPDEVTFCSLIDGLGKQGRVDDAYRLY 500

Query: 176 KKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLI 235
           ++M+  D         N   Y+ +I S  K G  +   ++F EM  RG +P + +    +
Sbjct: 501 EQMLDSD------KIPNAVVYTSLIKSFFKCGRKEDGHKIFKEMIHRGCSPDLRLLNAYM 554

Query: 236 HGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLN 295
                AG   +   LF E+   G  P++++++++I  L K G   E   L   M ++G  
Sbjct: 555 DCVFKAGETGKGRALFEEIKSRGFIPDVMSYSILIHGLVKAGFARETYELFYAMKEQGCV 614

Query: 296 PDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSL 355
            D   YN+ +DG+C  G+++ A ++   M +KG + TVV+Y  +I+G  KI  ++EA  L
Sbjct: 615 LDTHAYNTFIDGFCKSGKVNKAYQLLEEMKTKGRQPTVVTYGSVIDGLAKIDRLDEAYML 674

Query: 356 YRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCK 415
           + +  SNG+   V+ Y++L+ G  + G+   A  + +E+    + P++ T+N L+D L K
Sbjct: 675 FEEAKSNGLELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVK 734

Query: 416 NNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVT 475
              + EA+  F  ++  K       ++ LI+GLC+  + + A+  + ++ ++GL P  +T
Sbjct: 735 AEEINEALVCFQNMKNLKGTPNHITYSILINGLCRVRKFNKAFVFWQEMQKQGLKPNTIT 794

Query: 476 YSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMA 535
           Y+ MI GL + G + +A+      + NG  P+  ++N ++ G   + +  +  ++  +  
Sbjct: 795 YTTMIAGLAKAGNIAEASSLFERFKANGGVPDSASYNAIIEGLSYSRRAMEAYKIFEETR 854

Query: 536 EPERNLVPDDTTFSIVVDLLAKDEKYHECSAV 567
               N+     T   ++D L KDE   + + V
Sbjct: 855 MKGCNI--HTKTCIALLDALQKDECLEQAAIV 884



 Score =  211 bits (538), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 146/532 (27%), Positives = 252/532 (47%), Gaps = 41/532 (7%)

Query: 62  FFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFG 121
            F  M  +     +  F  +    A+    DA +S   ++ S  L  D +  N+ I+CFG
Sbjct: 220 LFHQMQELGYEVSVHLFTTVIRVFAREGRLDAALSLLDEMKSNCLHADIVLYNVCIDCFG 279

Query: 122 NKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKM--- 178
                     ++  A   F  + + G+ PD +TY ++I   C+   L  A+ + ++M   
Sbjct: 280 KA-------GKVDMAWKFFHEIKSHGLLPDDVTYTSMIGVLCKGNRLDEAVEIFEQMEQN 332

Query: 179 -----------------VSGDYENG--LISKT-------NIFSYSIIIDSLCKEGLVDKA 212
                             +G ++    L+ +        ++ +Y+ I+  L K+G + +A
Sbjct: 333 RNVPCAYAYNTMIMGYGSAGKFDEAYSLLERQKARGCIPSVIAYNCILTCLGKKGRLGEA 392

Query: 213 KELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDC 272
              F EMK +   P +     LI   C AG  E    +   M + G  PN++T N+MID 
Sbjct: 393 LRTFEEMK-KDAAPNLSTYNVLIDMLCKAGEVEAAFKVRDAMKEAGLFPNVMTVNIMIDR 451

Query: 273 LCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHT 332
           LCK  K++EA  + E M  +  +PD  T+ SL+DG    GR+D A  ++  M        
Sbjct: 452 LCKAKKLDEACSIFEGMNHKICSPDEVTFCSLIDGLGKQGRVDDAYRLYEQMLDSDKIPN 511

Query: 333 VVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFD 392
            V Y  LI  + K    E+   +++++I  G    +   N  +  +F+AG+ G  + LF+
Sbjct: 512 AVVYTSLIKSFFKCGRKEDGHKIFKEMIHRGCSPDLRLLNAYMDCVFKAGETGKGRALFE 571

Query: 393 EMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAG 452
           E+K     PD+ +Y+ILI GL K    +E  +LF+ ++          +N  IDG CK+G
Sbjct: 572 EIKSRGFIPDVMSYSILIHGLVKAGFARETYELFYAMKEQGCVLDTHAYNTFIDGFCKSG 631

Query: 453 RLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFN 512
           +++ A++L  ++  KG  PTVVTY  +I GL +  +L++A       + NG   NVV ++
Sbjct: 632 KVNKAYQLLEEMKTKGRQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGLELNVVIYS 691

Query: 513 TLMHGFLQNNKTSKVVELLHKMAE-PERNLVPDDTTFSIVVDLLAKDEKYHE 563
           +L+ GF    K  ++ E    M E  ++ L P+  T++ ++D L K E+ +E
Sbjct: 692 SLIDGF---GKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINE 740



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 140/527 (26%), Positives = 241/527 (45%), Gaps = 25/527 (4%)

Query: 34  VSSPETQLNEFLHENCKSGIINLNEARYFFGYMTHM--QPSPPISSFNLLFGAVAKNRHY 91
           V SP+T L   +    K    ++N+A  +F +      Q   P  +++ L   +AKN  +
Sbjct: 90  VESPKTDLVIGVLRRAK----DVNQAISYFRWTERKTDQALCP-EAYDSLLLVMAKNVKF 144

Query: 92  DAVISFYRKLVSIGLLPDFLT-LNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRP 150
           D       ++   G  P   T + ++++C  +        N+++E   L + M  F  RP
Sbjct: 145 DYFEQILGEMSIAGFGPSTKTCIELILSCIKS--------NKLREGFDLIQCMRKFKFRP 196

Query: 151 DVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVD 210
               Y TLI          + L L  +M    YE       ++  ++ +I    +EG +D
Sbjct: 197 AFSAYTTLIGALSSVQESDIMLTLFHQMQELGYE------VSVHLFTTVIRVFAREGRLD 250

Query: 211 KAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMI 270
            A  L  EMK   ++  +V+    I  F  AG  +     F E+   G  P+ +T+  MI
Sbjct: 251 AALSLLDEMKSNCLHADIVLYNVCIDCFGKAGKVDMAWKFFHEIKSHGLLPDDVTYTSMI 310

Query: 271 DCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCK 330
             LCKG +++EA  + E M Q    P  + YN+++ GY   G+ D A  +     ++GC 
Sbjct: 311 GVLCKGNRLDEAVEIFEQMEQNRNVPCAYAYNTMIMGYGSAGKFDEAYSLLERQKARGCI 370

Query: 331 HTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKL 390
            +V++YN ++    K   + EA+  + ++  +     + TYN L+  L +AG+   A K+
Sbjct: 371 PSVIAYNCILTCLGKKGRLGEALRTFEEMKKDAA-PNLSTYNVLIDMLCKAGEVEAAFKV 429

Query: 391 FDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCK 450
            D MK   + P++ T NI+ID LCK   + EA  +F  +           F  LIDGL K
Sbjct: 430 RDAMKEAGLFPNVMTVNIMIDRLCKAKKLDEACSIFEGMNHKICSPDEVTFCSLIDGLGK 489

Query: 451 AGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVT 510
            GR+D+A+ L+ ++     +P  V Y+ +I    + G+ E  +     M   GC+P++  
Sbjct: 490 QGRVDDAYRLYEQMLDSDKIPNAVVYTSLIKSFFKCGRKEDGHKIFKEMIHRGCSPDLRL 549

Query: 511 FNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAK 557
            N  M    +  +T K   L  ++    R  +PD  ++SI++  L K
Sbjct: 550 LNAYMDCVFKAGETGKGRALFEEI--KSRGFIPDVMSYSILIHGLVK 594



 Score = 92.4 bits (228), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 80/330 (24%), Positives = 140/330 (42%), Gaps = 20/330 (6%)

Query: 241 AGNW----EEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLL---ELMIQRG 293
           +GNW    E    LF+E     P+ +L+     I  L +   +N+A       E    + 
Sbjct: 75  SGNWGPDVENALSLFVE----SPKTDLV-----IGVLRRAKDVNQAISYFRWTERKTDQA 125

Query: 294 LNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAM 353
           L P+   Y+SL+       + D   +I   M   G   +  +   LI    K   + E  
Sbjct: 126 LCPE--AYDSLLLVMAKNVKFDYFEQILGEMSIAGFGPSTKTCIELILSCIKSNKLREGF 183

Query: 354 SLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGL 413
            L + +     R     Y TL+  L    ++     LF +M+    E  +  +  +I   
Sbjct: 184 DLIQCMRKFKFRPAFSAYTTLIGALSSVQESDIMLTLFHQMQELGYEVSVHLFTTVIRVF 243

Query: 414 CKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTV 473
            +   +  A+ L   ++ N     I ++N  ID   KAG++D AW+ FH++   GL+P  
Sbjct: 244 AREGRLDAALSLLDEMKSNCLHADIVLYNVCIDCFGKAGKVDMAWKFFHEIKSHGLLPDD 303

Query: 474 VTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHK 533
           VTY+ MI  LC+  +L++A +    ME+N   P    +NT++ G+    K  +   LL +
Sbjct: 304 VTYTSMIGVLCKGNRLDEAVEIFEQMEQNRNVPCAYAYNTMIMGYGSAGKFDEAYSLLER 363

Query: 534 MAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
             +  R  +P    ++ ++  L K  +  E
Sbjct: 364 --QKARGCIPSVIAYNCILTCLGKKGRLGE 391


>gi|222629056|gb|EEE61188.1| hypothetical protein OsJ_15186 [Oryza sativa Japonica Group]
          Length = 897

 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 147/511 (28%), Positives = 246/511 (48%), Gaps = 27/511 (5%)

Query: 53  IINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLT 112
           +++ ++A      + H+  +P  S  NLL  A A  R +   +  Y ++ S+ L     +
Sbjct: 396 VLSADKALSPLAVLPHLDGAPS-SLPNLLLTASAAVRPHATSLRLYSRMKSLSLPISTAS 454

Query: 113 LNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVAL 172
           L+ L++   +             A  LF +M    +     T+  ++   C  G  + AL
Sbjct: 455 LHPLLSALPSAP-----------AFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARAL 503

Query: 173 RLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRG-INPAVVVC 231
            L ++M           + N  +Y+ +I   C  G V  A ++  EM+ RG I P     
Sbjct: 504 ELLRQM----------PRPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTY 553

Query: 232 TTLIHGFCCAGNWEEVNGLFIEMLDLGP-RPNLLTFNVMIDCLCKGGKINEANGLLELMI 290
            T+I G+C  G  +E   +F EML  G  +P  + +N +I   C  GK++ A    + M+
Sbjct: 554 GTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMV 613

Query: 291 QRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVE 350
           +RG+     TYN L+    + GR   A E+   M  KG    V +YNILING+CK  NV+
Sbjct: 614 ERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVK 673

Query: 351 EAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILI 410
           +A+ ++  +   GVR TV+TY  L+  L + GQ     KLFDE     + PDL  YN LI
Sbjct: 674 KALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALI 733

Query: 411 DGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLV 470
           +    +  +  A ++   +E  +       +N L+ GLC  GR+D A +L  ++ ++G+ 
Sbjct: 734 NSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQ 793

Query: 471 PTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVEL 530
           P +VTY+ +I G   KG ++ A      M   G  P ++T+N L+ G  +N +      +
Sbjct: 794 PDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENM 853

Query: 531 LHKMAEPERNLVPDDTTF-SIVVDLLAKDEK 560
           + +M   E  + PDD+T+ S++  L  +DE+
Sbjct: 854 VKEMV--ENGITPDDSTYISLIEGLTTEDER 882


>gi|334188438|ref|NP_200395.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332009303|gb|AED96686.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 1136

 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 140/524 (26%), Positives = 251/524 (47%), Gaps = 50/524 (9%)

Query: 72  SPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVEN 131
           +P + + N + G+V K+    +V SF ++++   + PD  T NILIN        LC E 
Sbjct: 195 NPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINV-------LCAEG 247

Query: 132 RIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKT 191
             +++++L + M   G  P ++TY T+++ +C+ G    A+ L   M S   +       
Sbjct: 248 SFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVD------A 301

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
           ++ +Y+++I  LC+   + K   L  +M+ R I+P  V   TLI+GF   G     + L 
Sbjct: 302 DVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLL 361

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
            EML  G  PN +TFN +ID     G   EA  +  +M  +GL P   +Y  L+DG C  
Sbjct: 362 NEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKN 421

Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
              D AR  ++ M   G     ++Y  +I+G CK   ++EA+ L  ++  +G+   ++TY
Sbjct: 422 AEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTY 481

Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
           + L++G  + G+   A+++   +    + P+   Y+ LI   C+  C++EA++++  + +
Sbjct: 482 SALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMIL 541

Query: 432 NKFEFGIEIFNCLIDGLCKAGRLDNAWE-------------------------------- 459
                    FN L+  LCKAG++  A E                                
Sbjct: 542 EGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLK 601

Query: 460 ---LFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMH 516
              +F ++ + G  PT  TY  ++ GLC+ G L +A  FL  +     A + V +NTL+ 
Sbjct: 602 AFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLT 661

Query: 517 GFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEK 560
              ++   +K V L  +M   +R+++PD  T++ ++  L +  K
Sbjct: 662 AMCKSGNLAKAVSLFGEMV--QRSILPDSYTYTSLISGLCRKGK 703



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 161/580 (27%), Positives = 264/580 (45%), Gaps = 88/580 (15%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           C  G  +  ++ Y    M     +P I ++N +     K   + A I     + S G+  
Sbjct: 244 CAEG--SFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDA 301

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           D  T N+LI+        LC  NRI +   L ++M    + P+ +TY TLINGF   G +
Sbjct: 302 DVCTYNMLIH-------DLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKV 354

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
            +A +L  +M+S     GL    N  +++ +ID    EG   +A ++F  M+ +G+ P+ 
Sbjct: 355 LIASQLLNEMLS----FGL--SPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSE 408

Query: 229 VVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLEL 288
           V    L+ G C    ++   G ++ M   G     +T+  MID LCK G ++EA  LL  
Sbjct: 409 VSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNE 468

Query: 289 MIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKG---------------CK--- 330
           M + G++PD  TY++L++G+C VGR  TA+EI   ++  G               C+   
Sbjct: 469 MSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGC 528

Query: 331 ---------------HTV--VSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNT 373
                          HT    ++N+L+   CK   V EA    R + S+G+    ++++ 
Sbjct: 529 LKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDC 588

Query: 374 LLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNK 433
           L++G   +G+   A  +FDEM      P   TY  L+ GLCK   ++EA K    L    
Sbjct: 589 LINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVP 648

Query: 434 FEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGK----- 488
                 ++N L+  +CK+G L  A  LF ++ Q+ ++P   TY+ +I GLCRKGK     
Sbjct: 649 AAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAI 708

Query: 489 -------------------------LEKAND------FLLYMEKNGCAPNVVTFNTLMHG 517
                                    + KA        F   M+  G  P++VT N ++ G
Sbjct: 709 LFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDG 768

Query: 518 FLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAK 557
           + +  K  K  +LL +M    +N  P+ TT++I++   +K
Sbjct: 769 YSRMGKIEKTNDLLPEMG--NQNGGPNLTTYNILLHGYSK 806



 Score =  188 bits (477), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 108/357 (30%), Positives = 185/357 (51%), Gaps = 2/357 (0%)

Query: 196 YSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEML 255
           Y I+I    +EG++  + E+F  M   G NP+V  C  ++     +G    V     EML
Sbjct: 166 YDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEML 225

Query: 256 DLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRID 315
                P++ TFN++I+ LC  G   +++ L++ M + G  P   TYN+++  YC  GR  
Sbjct: 226 KRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFK 285

Query: 316 TAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLL 375
            A E+   M SKG    V +YN+LI+  C+   + +   L R +    +    +TYNTL+
Sbjct: 286 AAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLI 345

Query: 376 SGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFE 435
           +G    G+   A +L +EM  + + P+  T+N LIDG       +EA+K+F+M+E     
Sbjct: 346 NGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLT 405

Query: 436 FGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDF 495
                +  L+DGLCK    D A   + ++ + G+    +TY+ MI GLC+ G L++A   
Sbjct: 406 PSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVL 465

Query: 496 LLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVV 552
           L  M K+G  P++VT++ L++GF +  +     E++ ++      L P+   +S ++
Sbjct: 466 LNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRV--GLSPNGIIYSTLI 520



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 114/424 (26%), Positives = 212/424 (50%), Gaps = 8/424 (1%)

Query: 130 ENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLIS 189
           E  I+++  +F+ M  +G  P V T   ++    ++G         K+M+          
Sbjct: 176 EGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKI------ 229

Query: 190 KTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNG 249
             ++ +++I+I+ LC EG  +K+  L  +M+  G  P +V   T++H +C  G ++    
Sbjct: 230 CPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIE 289

Query: 250 LFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYC 309
           L   M   G   ++ T+N++I  LC+  +I +   LL  M +R ++P+  TYN+L++G+ 
Sbjct: 290 LLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFS 349

Query: 310 LVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVI 369
             G++  A ++   M S G     V++N LI+G+    N +EA+ ++  + + G+  + +
Sbjct: 350 NEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEV 409

Query: 370 TYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHML 429
           +Y  LL GL +  +   A+  +  MK   V     TY  +IDGLCKN  + EAV L + +
Sbjct: 410 SYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEM 469

Query: 430 EMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKL 489
             +  +  I  ++ LI+G CK GR   A E+  ++ + GL P  + YS +I+  CR G L
Sbjct: 470 SKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCL 529

Query: 490 EKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFS 549
           ++A      M   G   +  TFN L+    +  K ++  E +  M      ++P+  +F 
Sbjct: 530 KEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSD--GILPNTVSFD 587

Query: 550 IVVD 553
            +++
Sbjct: 588 CLIN 591



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 130/487 (26%), Positives = 228/487 (46%), Gaps = 24/487 (4%)

Query: 77   SFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEA 136
            +FN+L  ++ K         F R + S G+LP+ ++ + LIN +GN   GL       +A
Sbjct: 550  TFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGL-------KA 602

Query: 137  TWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSY 196
              +F  M   G  P   TYG+L+ G C+ G+L  A +  K +      + + +  +   Y
Sbjct: 603  FSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSL------HAVPAAVDTVMY 656

Query: 197  SIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLD 256
            + ++ ++CK G + KA  LF EM  R I P     T+LI G C  G    +  LF +  +
Sbjct: 657  NTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGK-TVIAILFAKEAE 715

Query: 257  LGPR--PNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRI 314
                  PN + +   +D + K G+        E M   G  PD  T N+++DGY  +G+I
Sbjct: 716  ARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKI 775

Query: 315  DTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTL 374
            +   ++   M ++     + +YNIL++GY K  +V  +  LYR II NG+    +T ++L
Sbjct: 776  EKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSL 835

Query: 375  LSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKF 434
            + G+ ++       K+        VE D  T+N+LI   C N  +  A  L  ++     
Sbjct: 836  VLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGI 895

Query: 435  EFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKAND 494
                +  + ++  L +  R   +  + H++ ++G+ P    Y  +I+GLCR G ++ A  
Sbjct: 896  SLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTA-- 953

Query: 495  FLLYME---KNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIV 551
            F++  E      C PNV   + ++    +  K  +   LL  M + +  LVP   +F+ +
Sbjct: 954  FVVKEEMIAHKICPPNVAE-SAMVRALAKCGKADEATLLLRFMLKMK--LVPTIASFTTL 1010

Query: 552  VDLLAKD 558
            + L  K+
Sbjct: 1011 MHLCCKN 1017



 Score =  138 bits (348), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 132/542 (24%), Positives = 220/542 (40%), Gaps = 86/542 (15%)

Query: 49   CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
            CK+G   + EA  F   MT     P   SF+ L      +       S + ++  +G  P
Sbjct: 559  CKAG--KVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHP 616

Query: 109  DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
             F T       +G+  +GLC    ++EA    K++ A     D + Y TL+   C++GNL
Sbjct: 617  TFFT-------YGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNL 669

Query: 169  SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRG-INPA 227
            + A+ L  +MV    +  ++  +  ++Y+ +I  LC++G    A     E + RG + P 
Sbjct: 670  AKAVSLFGEMV----QRSILPDS--YTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPN 723

Query: 228  VVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLE 287
             V+ T  + G   AG W+       +M +LG  P+++T N MID   + GKI + N LL 
Sbjct: 724  KVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLP 783

Query: 288  LMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKIL 347
             M  +   P+  TYN L+ GY     + T+  ++ S+   G     ++ + L+ G C+  
Sbjct: 784  EMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESN 843

Query: 348  NVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYA-------------------- 387
             +E  + + +  I  GV     T+N L+S     G+  +A                    
Sbjct: 844  MLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCD 903

Query: 388  ---------------QKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQ------------ 420
                           + +  EM    + P+   Y  LI+GLC+   ++            
Sbjct: 904  AMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAH 963

Query: 421  -----------------------EAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNA 457
                                   EA  L   +   K    I  F  L+   CK G +  A
Sbjct: 964  KICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEA 1023

Query: 458  WELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHG 517
             EL   +   GL   +V+Y+++I GLC KG +  A +    M+ +G   N  T+  L+ G
Sbjct: 1024 LELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRG 1083

Query: 518  FL 519
             L
Sbjct: 1084 LL 1085



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 115/478 (24%), Positives = 211/478 (44%), Gaps = 21/478 (4%)

Query: 21   LSSLFKSPRQIAAVSSPETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNL 80
            L SL   P  +  V       N  L   CKSG  NL +A   FG M      P   ++  
Sbjct: 641  LKSLHAVPAAVDTV-----MYNTLLTAMCKSG--NLAKAVSLFGEMVQRSILPDSYTYTS 693

Query: 81   LFGAVAKNRHYDAVISFYRKLVSIG-LLPDFLTLNILINCFGNKERGLCVENRIKEATWL 139
            L   + +       I F ++  + G +LP+     ++  CF +   G+    + K   + 
Sbjct: 694  LISGLCRKGKTVIAILFAKEAEARGNVLPN----KVMYTCFVD---GMFKAGQWKAGIYF 746

Query: 140  FKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSII 199
             + M   G  PD++T   +I+G+ R G +     L  +M  G+   G     N+ +Y+I+
Sbjct: 747  REQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEM--GNQNGG----PNLTTYNIL 800

Query: 200  IDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGP 259
            +    K   V  +  L+  +   GI P  + C +L+ G C +   E    +    +  G 
Sbjct: 801  LHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGV 860

Query: 260  RPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTARE 319
              +  TFN++I   C  G+IN A  L+++M   G++ D+ T ++++       R   +R 
Sbjct: 861  EVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRM 920

Query: 320  IFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLF 379
            +   M  +G       Y  LING C++ +++ A  +  ++I++ +    +  + ++  L 
Sbjct: 921  VLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALA 980

Query: 380  QAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIE 439
            + G+A  A  L   M    + P ++++  L+   CKN  V EA++L  ++     +  + 
Sbjct: 981  KCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLV 1040

Query: 440  IFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLL 497
             +N LI GLC  G +  A+EL+ ++   G +    TY  +I GL  +       D +L
Sbjct: 1041 SYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADIIL 1098



 Score =  113 bits (282), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 67/225 (29%), Positives = 114/225 (50%), Gaps = 2/225 (0%)

Query: 329 CKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQ 388
           C      Y+ILI  Y +   +++++ ++R +   G   +V T N +L  + ++G+     
Sbjct: 159 CNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVW 218

Query: 389 KLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGL 448
               EM    + PD++T+NILI+ LC     +++  L   +E + +   I  +N ++   
Sbjct: 219 SFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWY 278

Query: 449 CKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNV 508
           CK GR   A EL   +  KG+   V TY+++IH LCR  ++ K    L  M K    PN 
Sbjct: 279 CKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNE 338

Query: 509 VTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
           VT+NTL++GF    K     +LL++M      L P+  TF+ ++D
Sbjct: 339 VTYNTLINGFSNEGKVLIASQLLNEML--SFGLSPNHVTFNALID 381


>gi|414869870|tpg|DAA48427.1| TPA: hypothetical protein ZEAMMB73_860756 [Zea mays]
 gi|414869871|tpg|DAA48428.1| TPA: hypothetical protein ZEAMMB73_860756 [Zea mays]
          Length = 741

 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 135/414 (32%), Positives = 206/414 (49%), Gaps = 8/414 (1%)

Query: 154 TYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAK 213
           TY TLIN +C  G+L  A    K+ +S     GL   ++  +Y+  +   C+ GL   A 
Sbjct: 76  TYTTLINAYCHAGDLPAA----KRHLSSLLRAGLAPDSH--AYTSFVLGYCRTGLFAHAC 129

Query: 214 ELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCL 273
            LFL M  RG          L+ G C AG   E   +F  M   G  P+   +++M+  L
Sbjct: 130 RLFLLMPQRGCARTPFTYAALLQGLCGAGMVREAMAVFAGMWPDGCAPDSHVYSIMVHGL 189

Query: 274 CKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTV 333
           C  G+  EA  LL   + +G  P+   YN+L+DGYC  G ++ A +IF  M SKGC   V
Sbjct: 190 CGAGRAGEAVALLTDAMGKGFVPNVAVYNALIDGYCSTGDLELAIDIFKGMQSKGCLPNV 249

Query: 334 VSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDE 393
            +Y  LI G+CK   VE AM LY ++I  G+   V+TY TL+ G    G   +A +L   
Sbjct: 250 RTYTQLICGFCKSGKVERAMVLYSRMIEAGLAPNVVTYTTLIQGQCSEGHLEHAFRLLHS 309

Query: 394 MKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGR 453
           M+   + P+  T  +LID LCK+  ++EA +    L     +    I+  +ID LCK+G+
Sbjct: 310 MEACGLAPNEWTCLVLIDALCKHGRIEEAQQFLGSLVQKGIKVNQVIYTSMIDALCKSGK 369

Query: 454 LDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNT 513
            D A  L  K+  +G VP    YS +I GLCR+ KL +A   L  M ++G   N V F  
Sbjct: 370 FDGAHNLMQKIITEGFVPDAHMYSSLIDGLCRENKLLEAISLLNDMIESGVQANAVPFTI 429

Query: 514 LMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAV 567
           L+   L+  ++     +  +MA     + PD  T+++ +    +D +  +  ++
Sbjct: 430 LIDKHLREFRSDSPKMISDRMAAA--GVKPDVVTYTVFIRSYCQDGRMEDAESM 481



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 143/532 (26%), Positives = 244/532 (45%), Gaps = 42/532 (7%)

Query: 71  PSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVE 130
           P PPI   N L  A+A++     ++S    L +   + +  T   LIN +       C  
Sbjct: 39  PVPPIRCLNTLLMALARH----GMLSDMESLAARMPVRNLHTYTTLINAY-------CHA 87

Query: 131 NRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRL---------------H 175
             +  A     +++  G+ PD   Y + + G+CRTG  + A RL               +
Sbjct: 88  GDLPAAKRHLSSLLRAGLAPDSHAYTSFVLGYCRTGLFAHACRLFLLMPQRGCARTPFTY 147

Query: 176 KKMVSGDYENGLISKT-NIFS-------------YSIIIDSLCKEGLVDKAKELFLEMKG 221
             ++ G    G++ +   +F+             YSI++  LC  G   +A  L  +  G
Sbjct: 148 AALLQGLCGAGMVREAMAVFAGMWPDGCAPDSHVYSIMVHGLCGAGRAGEAVALLTDAMG 207

Query: 222 RGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINE 281
           +G  P V V   LI G+C  G+ E    +F  M   G  PN+ T+  +I   CK GK+  
Sbjct: 208 KGFVPNVAVYNALIDGYCSTGDLELAIDIFKGMQSKGCLPNVRTYTQLICGFCKSGKVER 267

Query: 282 ANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILIN 341
           A  L   MI+ GL P+  TY +L+ G C  G ++ A  +  SM + G      +  +LI+
Sbjct: 268 AMVLYSRMIEAGLAPNVVTYTTLIQGQCSEGHLEHAFRLLHSMEACGLAPNEWTCLVLID 327

Query: 342 GYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEP 401
             CK   +EEA      ++  G++   + Y +++  L ++G+   A  L  ++      P
Sbjct: 328 ALCKHGRIEEAQQFLGSLVQKGIKVNQVIYTSMIDALCKSGKFDGAHNLMQKIITEGFVP 387

Query: 402 DLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELF 461
           D   Y+ LIDGLC+ N + EA+ L + +  +  +     F  LID   +  R D+   + 
Sbjct: 388 DAHMYSSLIDGLCRENKLLEAISLLNDMIESGVQANAVPFTILIDKHLREFRSDSPKMIS 447

Query: 462 HKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQN 521
            ++   G+ P VVTY++ I   C+ G++E A   ++ M  +G  PN+ T+NTL+ G+   
Sbjct: 448 DRMAAAGVKPDVVTYTVFIRSYCQDGRMEDAESMMIQMIDHGVRPNLTTYNTLIKGYANL 507

Query: 522 NKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKSSYR 573
              S+    L  M   +    P+D ++++++ LL K   YH+  A S S ++
Sbjct: 508 GLVSQAFSSLKNMI--DNGCKPNDESYTVLLGLLLKKNSYHDLVADSISLWK 557



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 135/509 (26%), Positives = 235/509 (46%), Gaps = 31/509 (6%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
           P ++ +N L          +  I  ++ + S G LP+  T   LI        G C   +
Sbjct: 212 PNVAVYNALIDGYCSTGDLELAIDIFKGMQSKGCLPNVRTYTQLIC-------GFCKSGK 264

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
           ++ A  L+  MI  G+ P+V+TY TLI G C  G+L  A RL   M +     GL    N
Sbjct: 265 VERAMVLYSRMIEAGLAPNVVTYTTLIQGQCSEGHLEHAFRLLHSMEA----CGL--APN 318

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
            ++  ++ID+LCK G +++A++    +  +GI    V+ T++I   C +G ++  + L  
Sbjct: 319 EWTCLVLIDALCKHGRIEEAQQFLGSLVQKGIKVNQVIYTSMIDALCKSGKFDGAHNLMQ 378

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
           +++  G  P+   ++ +ID LC+  K+ EA  LL  MI+ G+  +   +  L+D +    
Sbjct: 379 KIITEGFVPDAHMYSSLIDGLCRENKLLEAISLLNDMIESGVQANAVPFTILIDKHLREF 438

Query: 313 RIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYN 372
           R D+ + I   M + G K  VV+Y + I  YC+   +E+A S+  Q+I +GVR  + TYN
Sbjct: 439 RSDSPKMISDRMAAAGVKPDVVTYTVFIRSYCQDGRMEDAESMMIQMIDHGVRPNLTTYN 498

Query: 373 TLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNC----VQEAVKLFHM 428
           TL+ G    G    A      M     +P+  +Y +L+  L K N     V +++ L+ +
Sbjct: 499 TLIKGYANLGLVSQAFSSLKNMIDNGCKPNDESYTVLLGLLLKKNSYHDLVADSISLWKI 558

Query: 429 LEMNKFEFGIE------------IFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTY 476
           ++M   E  +E            +++C I  L K  RL+ A      +    L P+   Y
Sbjct: 559 VDMKVLEELLEEVIKLQCSSASYVYDCFIRCLSKVDRLEEAKSFLVGMQSANLTPSEDVY 618

Query: 477 SIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAE 536
           + MI    R   L++A  FL  M K    P + ++  ++    +         +   +  
Sbjct: 619 TCMIECCYRMKLLKEALRFLDSMVKRNYLPRLESYRFIICALCEEGSFHTAKSIFGDILS 678

Query: 537 PERNLVPDDTTFSIVVDLLAKDEKYHECS 565
            E N   D+  + I++D L +     +CS
Sbjct: 679 KEYN--RDEIAWKILIDGLLQKGNTADCS 705



 Score = 99.0 bits (245), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 90/424 (21%), Positives = 162/424 (38%), Gaps = 66/424 (15%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CK G I   EA+ F G +           +  +  A+ K+  +D   +  +K+++ G +P
Sbjct: 330 CKHGRIE--EAQQFLGSLVQKGIKVNQVIYTSMIDALCKSGKFDGAHNLMQKIITEGFVP 387

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           D    + LI+       GLC EN++ EA  L  +MI  GV+ + + +  LI+   R    
Sbjct: 388 DAHMYSSLID-------GLCRENKLLEAISLLNDMIESGVQANAVPFTILIDKHLREFRS 440

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
                +  +M +         K ++ +Y++ I S C++G ++ A+ + ++M   G+ P +
Sbjct: 441 DSPKMISDRMAAAGV------KPDVVTYTVFIRSYCQDGRMEDAESMMIQMIDHGVRPNL 494

Query: 229 VVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVM------------------- 269
               TLI G+   G   +       M+D G +PN  ++ V+                   
Sbjct: 495 TTYNTLIKGYANLGLVSQAFSSLKNMIDNGCKPNDESYTVLLGLLLKKNSYHDLVADSIS 554

Query: 270 --------------------------------IDCLCKGGKINEANGLLELMIQRGLNPD 297
                                           I CL K  ++ EA   L  M    L P 
Sbjct: 555 LWKIVDMKVLEELLEEVIKLQCSSASYVYDCFIRCLSKVDRLEEAKSFLVGMQSANLTPS 614

Query: 298 RFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYR 357
              Y  +++    +  +  A     SM  +     + SY  +I   C+  +   A S++ 
Sbjct: 615 EDVYTCMIECCYRMKLLKEALRFLDSMVKRNYLPRLESYRFIICALCEEGSFHTAKSIFG 674

Query: 358 QIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNN 417
            I+S    +  I +  L+ GL Q G      +L   M+  N  P  + Y+ L   +   +
Sbjct: 675 DILSKEYNRDEIAWKILIDGLLQKGNTADCSRLLSFMEEQNCRPGSAIYSRLTGEITVTS 734

Query: 418 CVQE 421
             QE
Sbjct: 735 EAQE 738


>gi|15239874|ref|NP_196771.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171712|sp|Q9FMQ1.1|PP376_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g12100, mitochondrial; Flags: Precursor
 gi|9759377|dbj|BAB10028.1| unnamed protein product [Arabidopsis thaliana]
 gi|28973713|gb|AAO64173.1| unknown protein [Arabidopsis thaliana]
 gi|29824237|gb|AAP04079.1| unknown protein [Arabidopsis thaliana]
 gi|110737169|dbj|BAF00534.1| hypothetical protein [Arabidopsis thaliana]
 gi|332004380|gb|AED91763.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 816

 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 133/464 (28%), Positives = 238/464 (51%), Gaps = 15/464 (3%)

Query: 95  ISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVIT 154
           +  + ++    + P     N+LI+       GLC   R+ +A  LF  M+A  + P +IT
Sbjct: 199 LELFNRMKHDRIYPSVFIYNVLID-------GLCKGKRMNDAEQLFDEMLARRLLPSLIT 251

Query: 155 YGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKE 214
           Y TLI+G+C+ GN   + ++ ++M +   E  LI+      ++ ++  L K G+V+ A+ 
Sbjct: 252 YNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLIT------FNTLLKGLFKAGMVEDAEN 305

Query: 215 LFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLC 274
           +  EMK  G  P     + L  G+      E   G++   +D G + N  T +++++ LC
Sbjct: 306 VLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALC 365

Query: 275 KGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVV 334
           K GKI +A  +L   + +GL P+   YN+++DGYC  G +  AR    +M  +G K   +
Sbjct: 366 KEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHL 425

Query: 335 SYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEM 394
           +YN LI  +C++  +E A     ++   GV  +V TYN L+ G  +  +      +  EM
Sbjct: 426 AYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEM 485

Query: 395 KLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRL 454
           +     P++ +Y  LI+ LCK + + EA  +   +E       + I+N LIDG C  G++
Sbjct: 486 EDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKI 545

Query: 455 DNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTL 514
           ++A+    ++ +KG+   +VTY+ +I GL   GKL +A D LL + + G  P+V T+N+L
Sbjct: 546 EDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSL 605

Query: 515 MHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKD 558
           + G+       + + L  +M      + P   T+ +++ L  K+
Sbjct: 606 ISGYGFAGNVQRCIALYEEMKRS--GIKPTLKTYHLLISLCTKE 647



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 142/514 (27%), Positives = 246/514 (47%), Gaps = 49/514 (9%)

Query: 50  KSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPD 109
           K+G++   +A      M  +   P   +F++LF   + N   +A +  Y   V  G+  +
Sbjct: 296 KAGMVE--DAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMN 353

Query: 110 FLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLS 169
             T +IL+N        LC E +I++A  +    +A G+ P+ + Y T+I+G+CR G+L 
Sbjct: 354 AYTCSILLN-------ALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDL- 405

Query: 170 VALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVV 229
           V  R+    +    + G+  K +  +Y+ +I   C+ G ++ A++   +MK +G++P+V 
Sbjct: 406 VGARMK---IEAMEKQGM--KPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVE 460

Query: 230 VCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELM 289
               LI G+     +++   +  EM D G  PN++++  +I+CLCKG K+ EA  +   M
Sbjct: 461 TYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDM 520

Query: 290 IQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNV 349
             RG++P    YN L+DG C  G+I+ A      M  KG +  +V+YN LI+G      +
Sbjct: 521 EDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKL 580

Query: 350 EEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNIL 409
            EA  L  +I   G++  V TYN+L+SG   AG       L++EMK   ++P L TY++L
Sbjct: 581 SEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLL 640

Query: 410 IDGLCKNNCVQEAVKLFHML------------------------------EMNKFEFGIE 439
           I  LC    ++   +LF  +                              +M +   G++
Sbjct: 641 I-SLCTKEGIELTERLFGEMSLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLD 699

Query: 440 --IFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLL 497
              +N LI G  K G+L     L  ++  + + P   TY+I++ G C       A  +  
Sbjct: 700 KTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYR 759

Query: 498 YMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELL 531
            M++ G   +V   N L+ G L+    SK  E++
Sbjct: 760 EMQEKGFLLDVCIGNELVSG-LKEEWRSKEAEIV 792



 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 142/521 (27%), Positives = 230/521 (44%), Gaps = 44/521 (8%)

Query: 62  FFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCF- 120
            F  M H +  P +  +N+L   + K +  +     + ++++  LLP  +T N LI+ + 
Sbjct: 201 LFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYC 260

Query: 121 --GNKERGLCVENRIK-------------------------EATWLFKNMIAFGVRPDVI 153
             GN E+   V  R+K                         +A  + K M   G  PD  
Sbjct: 261 KAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAF 320

Query: 154 TYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLIS--KTNIFSYSIIIDSLCKEGLVDK 211
           T+  L +G+        AL        G YE  + S  K N ++ SI++++LCKEG ++K
Sbjct: 321 TFSILFDGYSSNEKAEAAL--------GVYETAVDSGVKMNAYTCSILLNALCKEGKIEK 372

Query: 212 AKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMID 271
           A+E+      +G+ P  V+  T+I G+C  G+          M   G +P+ L +N +I 
Sbjct: 373 AEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIR 432

Query: 272 CLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKH 331
             C+ G++  A   +  M  +G++P   TYN L+ GY      D   +I   M   G   
Sbjct: 433 RFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMP 492

Query: 332 TVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLF 391
            VVSY  LIN  CK   + EA  + R +   GV   V  YN L+ G    G+   A +  
Sbjct: 493 NVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFS 552

Query: 392 DEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKA 451
            EM    +E +L TYN LIDGL     + EA  L   +     +  +  +N LI G   A
Sbjct: 553 KEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFA 612

Query: 452 GRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTF 511
           G +     L+ ++ + G+ PT+ TY ++I  LC K  +E        M      P+++ +
Sbjct: 613 GNVQRCIALYEEMKRSGIKPTLKTYHLLI-SLCTKEGIELTERLFGEM---SLKPDLLVY 668

Query: 512 NTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVV 552
           N ++H +  +    K   L  +M E    L  D TT++ ++
Sbjct: 669 NGVLHCYAVHGDMEKAFNLQKQMIEKSIGL--DKTTYNSLI 707



 Score =  171 bits (434), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 103/371 (27%), Positives = 187/371 (50%), Gaps = 2/371 (0%)

Query: 194 FSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIE 253
           FSY ++   L +  ++ +A +LF  ++  GI P+    T L+        +     +F+ 
Sbjct: 110 FSYLLLSVLLNESKMISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLN 169

Query: 254 MLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGR 313
           +L+   RP+   +   I    K   + +   L   M    + P  F YN L+DG C   R
Sbjct: 170 ILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKR 229

Query: 314 IDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNT 373
           ++ A ++F  M ++    ++++YN LI+GYCK  N E++  +  ++ ++ +  ++IT+NT
Sbjct: 230 MNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNT 289

Query: 374 LLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNK 433
           LL GLF+AG    A+ +  EMK     PD  T++IL DG   N   + A+ ++     + 
Sbjct: 290 LLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSG 349

Query: 434 FEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKAN 493
            +      + L++ LCK G+++ A E+  +   KGLVP  V Y+ MI G CRKG L  A 
Sbjct: 350 VKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGAR 409

Query: 494 DFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
             +  MEK G  P+ + +N L+  F +  +     + ++KM    + + P   T++I++ 
Sbjct: 410 MKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMK--LKGVSPSVETYNILIG 467

Query: 554 LLAKDEKYHEC 564
              +  ++ +C
Sbjct: 468 GYGRKYEFDKC 478



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 93/354 (26%), Positives = 168/354 (47%), Gaps = 44/354 (12%)

Query: 72  SPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVEN 131
           SP + ++N+L G   +   +D      +++   G +P+ ++   LINC       LC  +
Sbjct: 456 SPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINC-------LCKGS 508

Query: 132 RIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKT 191
           ++ EA  + ++M   GV P V  Y  LI+G C  G +  A R  K+M+    E       
Sbjct: 509 KLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIE------L 562

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
           N+ +Y+ +ID L   G + +A++L LE+  +G+ P V    +LI G+  AGN +    L+
Sbjct: 563 NLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALY 622

Query: 252 IEML-------------------------------DLGPRPNLLTFNVMIDCLCKGGKIN 280
            EM                                ++  +P+LL +N ++ C    G + 
Sbjct: 623 EEMKRSGIKPTLKTYHLLISLCTKEGIELTERLFGEMSLKPDLLVYNGVLHCYAVHGDME 682

Query: 281 EANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILI 340
           +A  L + MI++ +  D+ TYNSL+ G   VG++   R +   M+++  +    +YNI++
Sbjct: 683 KAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIV 742

Query: 341 NGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEM 394
            G+C++ +   A   YR++   G    V   N L+SGL +  ++  A+ +  EM
Sbjct: 743 KGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVSGLKEEWRSKEAEIVISEM 796



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 83/306 (27%), Positives = 149/306 (48%), Gaps = 19/306 (6%)

Query: 48  NCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLF-GAVAKNRHYDAVISFYRKLVSIGL 106
           NC      L EA+     M     SP +  +N+L  G  +K +  DA   F ++++  G+
Sbjct: 502 NCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDA-FRFSKEMLKKGI 560

Query: 107 LPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTG 166
             + +T N LI+       GL +  ++ EA  L   +   G++PDV TY +LI+G+   G
Sbjct: 561 ELNLVTYNTLID-------GLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAG 613

Query: 167 NLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINP 226
           N+   + L+++M      +G+  K  + +Y ++I SLC +  ++  + LF EM    + P
Sbjct: 614 NVQRCIALYEEM----KRSGI--KPTLKTYHLLI-SLCTKEGIELTERLFGEM---SLKP 663

Query: 227 AVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLL 286
            ++V   ++H +   G+ E+   L  +M++     +  T+N +I    K GK+ E   L+
Sbjct: 664 DLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLI 723

Query: 287 ELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKI 346
           + M  R + P+  TYN ++ G+C V    +A   +  M  KG    V   N L++G  + 
Sbjct: 724 DEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVSGLKEE 783

Query: 347 LNVEEA 352
              +EA
Sbjct: 784 WRSKEA 789


>gi|8843735|dbj|BAA97283.1| unnamed protein product [Arabidopsis thaliana]
          Length = 1274

 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 140/524 (26%), Positives = 251/524 (47%), Gaps = 50/524 (9%)

Query: 72  SPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVEN 131
           +P + + N + G+V K+    +V SF ++++   + PD  T NILIN        LC E 
Sbjct: 155 NPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINV-------LCAEG 207

Query: 132 RIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKT 191
             +++++L + M   G  P ++TY T+++ +C+ G    A+ L   M S   +       
Sbjct: 208 SFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVD------A 261

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
           ++ +Y+++I  LC+   + K   L  +M+ R I+P  V   TLI+GF   G     + L 
Sbjct: 262 DVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLL 321

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
            EML  G  PN +TFN +ID     G   EA  +  +M  +GL P   +Y  L+DG C  
Sbjct: 322 NEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKN 381

Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
              D AR  ++ M   G     ++Y  +I+G CK   ++EA+ L  ++  +G+   ++TY
Sbjct: 382 AEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTY 441

Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
           + L++G  + G+   A+++   +    + P+   Y+ LI   C+  C++EA++++  + +
Sbjct: 442 SALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMIL 501

Query: 432 NKFEFGIEIFNCLIDGLCKAGRLDNAWE-------------------------------- 459
                    FN L+  LCKAG++  A E                                
Sbjct: 502 EGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLK 561

Query: 460 ---LFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMH 516
              +F ++ + G  PT  TY  ++ GLC+ G L +A  FL  +     A + V +NTL+ 
Sbjct: 562 AFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLT 621

Query: 517 GFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEK 560
              ++   +K V L  +M   +R+++PD  T++ ++  L +  K
Sbjct: 622 AMCKSGNLAKAVSLFGEMV--QRSILPDSYTYTSLISGLCRKGK 663



 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 160/575 (27%), Positives = 262/575 (45%), Gaps = 88/575 (15%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           C  G  +  ++ Y    M     +P I ++N +     K   + A I     + S G+  
Sbjct: 204 CAEG--SFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDA 261

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           D  T N+LI+        LC  NRI +   L ++M    + P+ +TY TLINGF   G +
Sbjct: 262 DVCTYNMLIH-------DLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKV 314

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
            +A +L  +M+S     GL    N  +++ +ID    EG   +A ++F  M+ +G+ P+ 
Sbjct: 315 LIASQLLNEMLSF----GL--SPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSE 368

Query: 229 VVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLEL 288
           V    L+ G C    ++   G ++ M   G     +T+  MID LCK G ++EA  LL  
Sbjct: 369 VSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNE 428

Query: 289 MIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKG---------------CK--- 330
           M + G++PD  TY++L++G+C VGR  TA+EI   ++  G               C+   
Sbjct: 429 MSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGC 488

Query: 331 ---------------HTV--VSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNT 373
                          HT    ++N+L+   CK   V EA    R + S+G+    ++++ 
Sbjct: 489 LKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDC 548

Query: 374 LLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNK 433
           L++G   +G+   A  +FDEM      P   TY  L+ GLCK   ++EA K    L    
Sbjct: 549 LINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVP 608

Query: 434 FEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGK----- 488
                 ++N L+  +CK+G L  A  LF ++ Q+ ++P   TY+ +I GLCRKGK     
Sbjct: 609 AAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAI 668

Query: 489 -------------------------LEKAND------FLLYMEKNGCAPNVVTFNTLMHG 517
                                    + KA        F   M+  G  P++VT N ++ G
Sbjct: 669 LFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDG 728

Query: 518 FLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVV 552
           + +  K  K  +LL +M    +N  P+ TT++I++
Sbjct: 729 YSRMGKIEKTNDLLPEMG--NQNGGPNLTTYNILL 761



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 108/357 (30%), Positives = 185/357 (51%), Gaps = 2/357 (0%)

Query: 196 YSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEML 255
           Y I+I    +EG++  + E+F  M   G NP+V  C  ++     +G    V     EML
Sbjct: 126 YDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEML 185

Query: 256 DLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRID 315
                P++ TFN++I+ LC  G   +++ L++ M + G  P   TYN+++  YC  GR  
Sbjct: 186 KRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFK 245

Query: 316 TAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLL 375
            A E+   M SKG    V +YN+LI+  C+   + +   L R +    +    +TYNTL+
Sbjct: 246 AAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLI 305

Query: 376 SGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFE 435
           +G    G+   A +L +EM  + + P+  T+N LIDG       +EA+K+F+M+E     
Sbjct: 306 NGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLT 365

Query: 436 FGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDF 495
                +  L+DGLCK    D A   + ++ + G+    +TY+ MI GLC+ G L++A   
Sbjct: 366 PSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVL 425

Query: 496 LLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVV 552
           L  M K+G  P++VT++ L++GF +  +     E++ ++      L P+   +S ++
Sbjct: 426 LNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRV--GLSPNGIIYSTLI 480



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 114/424 (26%), Positives = 212/424 (50%), Gaps = 8/424 (1%)

Query: 130 ENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLIS 189
           E  I+++  +F+ M  +G  P V T   ++    ++G         K+M+          
Sbjct: 136 EGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKI------ 189

Query: 190 KTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNG 249
             ++ +++I+I+ LC EG  +K+  L  +M+  G  P +V   T++H +C  G ++    
Sbjct: 190 CPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIE 249

Query: 250 LFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYC 309
           L   M   G   ++ T+N++I  LC+  +I +   LL  M +R ++P+  TYN+L++G+ 
Sbjct: 250 LLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFS 309

Query: 310 LVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVI 369
             G++  A ++   M S G     V++N LI+G+    N +EA+ ++  + + G+  + +
Sbjct: 310 NEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEV 369

Query: 370 TYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHML 429
           +Y  LL GL +  +   A+  +  MK   V     TY  +IDGLCKN  + EAV L + +
Sbjct: 370 SYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEM 429

Query: 430 EMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKL 489
             +  +  I  ++ LI+G CK GR   A E+  ++ + GL P  + YS +I+  CR G L
Sbjct: 430 SKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCL 489

Query: 490 EKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFS 549
           ++A      M   G   +  TFN L+    +  K ++  E +  M      ++P+  +F 
Sbjct: 490 KEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSD--GILPNTVSFD 547

Query: 550 IVVD 553
            +++
Sbjct: 548 CLIN 551



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 130/487 (26%), Positives = 228/487 (46%), Gaps = 24/487 (4%)

Query: 77  SFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEA 136
           +FN+L  ++ K         F R + S G+LP+ ++ + LIN +GN   GL       +A
Sbjct: 510 TFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGL-------KA 562

Query: 137 TWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSY 196
             +F  M   G  P   TYG+L+ G C+ G+L  A +  K +      + + +  +   Y
Sbjct: 563 FSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSL------HAVPAAVDTVMY 616

Query: 197 SIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLD 256
           + ++ ++CK G + KA  LF EM  R I P     T+LI G C  G    +  LF +  +
Sbjct: 617 NTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGK-TVIAILFAKEAE 675

Query: 257 LGPR--PNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRI 314
                 PN + +   +D + K G+        E M   G  PD  T N+++DGY  +G+I
Sbjct: 676 ARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKI 735

Query: 315 DTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTL 374
           +   ++   M ++     + +YNIL++GY K  +V  +  LYR II NG+    +T ++L
Sbjct: 736 EKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSL 795

Query: 375 LSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKF 434
           + G+ ++       K+        VE D  T+N+LI   C N  +  A  L  ++     
Sbjct: 796 VLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGI 855

Query: 435 EFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKAND 494
               +  + ++  L +  R   +  + H++ ++G+ P    Y  +I+GLCR G ++ A  
Sbjct: 856 SLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTA-- 913

Query: 495 FLLYMEKNG---CAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIV 551
           F++  E      C PNV   + ++    +  K  +   LL  M + +  LVP   +F+ +
Sbjct: 914 FVVKEEMIAHKICPPNVAE-SAMVRALAKCGKADEATLLLRFMLKMK--LVPTIASFTTL 970

Query: 552 VDLLAKD 558
           + L  K+
Sbjct: 971 MHLCCKN 977



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 132/542 (24%), Positives = 220/542 (40%), Gaps = 86/542 (15%)

Query: 49   CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
            CK+G   + EA  F   MT     P   SF+ L      +       S + ++  +G  P
Sbjct: 519  CKAG--KVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHP 576

Query: 109  DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
             F T       +G+  +GLC    ++EA    K++ A     D + Y TL+   C++GNL
Sbjct: 577  TFFT-------YGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNL 629

Query: 169  SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRG-INPA 227
            + A+ L  +MV    +  ++  +  ++Y+ +I  LC++G    A     E + RG + P 
Sbjct: 630  AKAVSLFGEMV----QRSILPDS--YTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPN 683

Query: 228  VVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLE 287
             V+ T  + G   AG W+       +M +LG  P+++T N MID   + GKI + N LL 
Sbjct: 684  KVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLP 743

Query: 288  LMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKIL 347
             M  +   P+  TYN L+ GY     + T+  ++ S+   G     ++ + L+ G C+  
Sbjct: 744  EMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESN 803

Query: 348  NVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYA-------------------- 387
             +E  + + +  I  GV     T+N L+S     G+  +A                    
Sbjct: 804  MLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCD 863

Query: 388  ---------------QKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQ------------ 420
                           + +  EM    + P+   Y  LI+GLC+   ++            
Sbjct: 864  AMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAH 923

Query: 421  -----------------------EAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNA 457
                                   EA  L   +   K    I  F  L+   CK G +  A
Sbjct: 924  KICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEA 983

Query: 458  WELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHG 517
             EL   +   GL   +V+Y+++I GLC KG +  A +    M+ +G   N  T+  L+ G
Sbjct: 984  LELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRG 1043

Query: 518  FL 519
             L
Sbjct: 1044 LL 1045



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 115/478 (24%), Positives = 211/478 (44%), Gaps = 21/478 (4%)

Query: 21   LSSLFKSPRQIAAVSSPETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNL 80
            L SL   P  +  V       N  L   CKSG  NL +A   FG M      P   ++  
Sbjct: 601  LKSLHAVPAAVDTV-----MYNTLLTAMCKSG--NLAKAVSLFGEMVQRSILPDSYTYTS 653

Query: 81   LFGAVAKNRHYDAVISFYRKLVSIG-LLPDFLTLNILINCFGNKERGLCVENRIKEATWL 139
            L   + +       I F ++  + G +LP+     ++  CF +   G+    + K   + 
Sbjct: 654  LISGLCRKGKTVIAILFAKEAEARGNVLPN----KVMYTCFVD---GMFKAGQWKAGIYF 706

Query: 140  FKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSII 199
             + M   G  PD++T   +I+G+ R G +     L  +M  G+   G     N+ +Y+I+
Sbjct: 707  REQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEM--GNQNGG----PNLTTYNIL 760

Query: 200  IDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGP 259
            +    K   V  +  L+  +   GI P  + C +L+ G C +   E    +    +  G 
Sbjct: 761  LHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGV 820

Query: 260  RPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTARE 319
              +  TFN++I   C  G+IN A  L+++M   G++ D+ T ++++       R   +R 
Sbjct: 821  EVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRM 880

Query: 320  IFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLF 379
            +   M  +G       Y  LING C++ +++ A  +  ++I++ +    +  + ++  L 
Sbjct: 881  VLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALA 940

Query: 380  QAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIE 439
            + G+A  A  L   M    + P ++++  L+   CKN  V EA++L  ++     +  + 
Sbjct: 941  KCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLV 1000

Query: 440  IFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLL 497
             +N LI GLC  G +  A+EL+ ++   G +    TY  +I GL  +       D +L
Sbjct: 1001 SYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADIIL 1058



 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 67/225 (29%), Positives = 114/225 (50%), Gaps = 2/225 (0%)

Query: 329 CKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQ 388
           C      Y+ILI  Y +   +++++ ++R +   G   +V T N +L  + ++G+     
Sbjct: 119 CNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVW 178

Query: 389 KLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGL 448
               EM    + PD++T+NILI+ LC     +++  L   +E + +   I  +N ++   
Sbjct: 179 SFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWY 238

Query: 449 CKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNV 508
           CK GR   A EL   +  KG+   V TY+++IH LCR  ++ K    L  M K    PN 
Sbjct: 239 CKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNE 298

Query: 509 VTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
           VT+NTL++GF    K     +LL++M      L P+  TF+ ++D
Sbjct: 299 VTYNTLINGFSNEGKVLIASQLLNEML--SFGLSPNHVTFNALID 341


>gi|357438771|ref|XP_003589662.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355478710|gb|AES59913.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 988

 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 144/516 (27%), Positives = 252/516 (48%), Gaps = 54/516 (10%)

Query: 75  ISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIK 134
           +   +LL    AK    +  +  + K+V+ GLLPD    N ++    +K       + + 
Sbjct: 137 VKLLDLLIQVFAKKLILEKCLMVFYKMVNNGLLPDVRNCNRVLKLLKDK-------SMVN 189

Query: 135 EATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHK--KMVSGDYENGLISKTN 192
           E   ++  MI   +RP ++T+ T+++  C+ G +  A+ +    +M   D         N
Sbjct: 190 EVEEVYSVMIKCQIRPTIVTFNTMMDSRCKEGEVGRAVEVLDVMRMFGCD--------PN 241

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
             SY+++++ L  +G  D+AKEL  +M   G+  +      LI GFC    +EE N L  
Sbjct: 242 DVSYNVLVNGLSGKGEFDRAKELIEQMSMLGLKVSAHTYNPLIRGFCKKEMFEEANDLRR 301

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
           EML  G  P ++T+N ++  LC+ G++++A   L++M+   L PD  +YN+L+ GY  +G
Sbjct: 302 EMLGRGALPTVVTYNTIMYSLCRLGRVSDARRYLDVMVNEDLMPDLVSYNTLIYGYSRLG 361

Query: 313 RIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYN 372
               A  +F  + SK    +VV+YN LI+G C+  N++ A  +   +I +G+   V+T+ 
Sbjct: 362 NFAEALLLFSELRSKNLVPSVVTYNTLIDGGCRTGNLDIAKGMKDDMIKHGLCPDVVTFT 421

Query: 373 TLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMN 432
            L+ G  Q G    A++LFDEM    ++PD   Y   I G  K     +A  +   ++  
Sbjct: 422 ILVRGFCQMGNLPMAKELFDEMLSRGLKPDCIAYTTRIVGELKLGNPSKAFGMKEEMKAE 481

Query: 433 KFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLP--------------------------- 465
            F   +  +N LI+GLCK G  D+A EL  K+                            
Sbjct: 482 GFPPDLITYNVLINGLCKLGNFDDANELVQKMRLEGIVPDHVTYTSIIHAHLISGLLRKA 541

Query: 466 --------QKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHG 517
                   +KG+ P+VVTY+++IH    +G+L+ A  +   M+  G +PNV+T+N L++G
Sbjct: 542 EEVFSDMLKKGIHPSVVTYTVLIHSYAVRGRLDFAKKYFDEMQDKGVSPNVITYNALIYG 601

Query: 518 FLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
             + N       L  +M    + + P+  T++I+++
Sbjct: 602 LCKENMMDVAYNLFAEME--SKGVSPNKYTYTILIN 635



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 142/505 (28%), Positives = 244/505 (48%), Gaps = 15/505 (2%)

Query: 56  LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNI 115
           +NE    +  M   Q  P I +FN +  +  K       +     +   G  P+ ++ N+
Sbjct: 188 VNEVEEVYSVMIKCQIRPTIVTFNTMMDSRCKEGEVGRAVEVLDVMRMFGCDPNDVSYNV 247

Query: 116 LINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLH 175
           L+N       GL  +     A  L + M   G++    TY  LI GFC+      A  L 
Sbjct: 248 LVN-------GLSGKGEFDRAKELIEQMSMLGLKVSAHTYNPLIRGFCKKEMFEEANDLR 300

Query: 176 KKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLI 235
           ++M+      G  +   + +Y+ I+ SLC+ G V  A+     M    + P +V   TLI
Sbjct: 301 REML------GRGALPTVVTYNTIMYSLCRLGRVSDARRYLDVMVNEDLMPDLVSYNTLI 354

Query: 236 HGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLN 295
           +G+   GN+ E   LF E+      P+++T+N +ID  C+ G ++ A G+ + MI+ GL 
Sbjct: 355 YGYSRLGNFAEALLLFSELRSKNLVPSVVTYNTLIDGGCRTGNLDIAKGMKDDMIKHGLC 414

Query: 296 PDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSL 355
           PD  T+  L+ G+C +G +  A+E+F  M S+G K   ++Y   I G  K+ N  +A  +
Sbjct: 415 PDVVTFTILVRGFCQMGNLPMAKELFDEMLSRGLKPDCIAYTTRIVGELKLGNPSKAFGM 474

Query: 356 YRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCK 415
             ++ + G    +ITYN L++GL + G    A +L  +M+L  + PD  TY  +I     
Sbjct: 475 KEEMKAEGFPPDLITYNVLINGLCKLGNFDDANELVQKMRLEGIVPDHVTYTSIIHAHLI 534

Query: 416 NNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVT 475
           +  +++A ++F  +        +  +  LI      GRLD A + F ++  KG+ P V+T
Sbjct: 535 SGLLRKAEEVFSDMLKKGIHPSVVTYTVLIHSYAVRGRLDFAKKYFDEMQDKGVSPNVIT 594

Query: 476 YSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMA 535
           Y+ +I+GLC++  ++ A +    ME  G +PN  T+  L++           ++L   M 
Sbjct: 595 YNALIYGLCKENMMDVAYNLFAEMESKGVSPNKYTYTILINENSNLQYWQDALKLYKDML 654

Query: 536 EPERNLVPDDTTFSIVVDLLAKDEK 560
             +R + PD  T S ++  L+KD K
Sbjct: 655 --DREIKPDSCTHSALMKHLSKDYK 677



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 111/359 (30%), Positives = 169/359 (47%), Gaps = 37/359 (10%)

Query: 186 GLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWE 245
           G  S+ ++    ++I    K+ +++K   +F +M   G+ P V  C  ++          
Sbjct: 130 GRNSEVSVKLLDLLIQVFAKKLILEKCLMVFYKMVNNGLLPDVRNCNRVLKLLKDKSMVN 189

Query: 246 EVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLM 305
           EV  ++  M+    RP ++TFN M+D  CK G++  A  +L++M   G +P+  +YN L+
Sbjct: 190 EVEEVYSVMIKCQIRPTIVTFNTMMDSRCKEGEVGRAVEVLDVMRMFGCDPNDVSYNVLV 249

Query: 306 DGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVR 365
           +G    G  D A+E+   M   G K +  +YN LI G+CK    EEA  L R+++  G  
Sbjct: 250 NGLSGKGEFDRAKELIEQMSMLGLKVSAHTYNPLIRGFCKKEMFEEANDLRREMLGRGAL 309

Query: 366 QTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKL 425
            TV+TYNT++  L + G+   A++  D M   ++ PDL +YN                  
Sbjct: 310 PTVVTYNTIMYSLCRLGRVSDARRYLDVMVNEDLMPDLVSYN------------------ 351

Query: 426 FHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCR 485
                             LI G  + G    A  LF +L  K LVP+VVTY+ +I G CR
Sbjct: 352 -----------------TLIYGYSRLGNFAEALLLFSELRSKNLVPSVVTYNTLIDGGCR 394

Query: 486 KGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPD 544
            G L+ A      M K+G  P+VVTF  L+ GF Q        EL  +M    R L PD
Sbjct: 395 TGNLDIAKGMKDDMIKHGLCPDVVTFTILVRGFCQMGNLPMAKELFDEML--SRGLKPD 451



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 93/324 (28%), Positives = 157/324 (48%), Gaps = 13/324 (4%)

Query: 55  NLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLN 114
           N  EA   F  +      P + ++N L     +  + D        ++  GL PD +T  
Sbjct: 362 NFAEALLLFSELRSKNLVPSVVTYNTLIDGGCRTGNLDIAKGMKDDMIKHGLCPDVVTFT 421

Query: 115 ILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRL 174
           IL+       RG C    +  A  LF  M++ G++PD I Y T I G  + GN S A  +
Sbjct: 422 ILV-------RGFCQMGNLPMAKELFDEMLSRGLKPDCIAYTTRIVGELKLGNPSKAFGM 474

Query: 175 HKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTL 234
            ++M +  +   LI+      Y+++I+ LCK G  D A EL  +M+  GI P  V  T++
Sbjct: 475 KEEMKAEGFPPDLIT------YNVLINGLCKLGNFDDANELVQKMRLEGIVPDHVTYTSI 528

Query: 235 IHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGL 294
           IH    +G   +   +F +ML  G  P+++T+ V+I      G+++ A    + M  +G+
Sbjct: 529 IHAHLISGLLRKAEEVFSDMLKKGIHPSVVTYTVLIHSYAVRGRLDFAKKYFDEMQDKGV 588

Query: 295 NPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMS 354
           +P+  TYN+L+ G C    +D A  +F  M SKG      +Y ILIN    +   ++A+ 
Sbjct: 589 SPNVITYNALIYGLCKENMMDVAYNLFAEMESKGVSPNKYTYTILINENSNLQYWQDALK 648

Query: 355 LYRQIISNGVRQTVITYNTLLSGL 378
           LY+ ++   ++    T++ L+  L
Sbjct: 649 LYKDMLDREIKPDSCTHSALMKHL 672



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 59/231 (25%), Positives = 111/231 (48%), Gaps = 16/231 (6%)

Query: 52  GIINLNEARYFFGYMTHMQPS---PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           G + L      FG    M+     P + ++N+L   + K  ++D      +K+   G++P
Sbjct: 461 GELKLGNPSKAFGMKEEMKAEGFPPDLITYNVLINGLCKLGNFDDANELVQKMRLEGIVP 520

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           D +T   +I+          +   +++A  +F +M+  G+ P V+TY  LI+ +   G L
Sbjct: 521 DHVTYTSIIHAH-------LISGLLRKAEEVFSDMLKKGIHPSVVTYTVLIHSYAVRGRL 573

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
             A +   +M     + G+    N+ +Y+ +I  LCKE ++D A  LF EM+ +G++P  
Sbjct: 574 DFAKKYFDEM----QDKGV--SPNVITYNALIYGLCKENMMDVAYNLFAEMESKGVSPNK 627

Query: 229 VVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKI 279
              T LI+       W++   L+ +MLD   +P+  T + ++  L K  K+
Sbjct: 628 YTYTILINENSNLQYWQDALKLYKDMLDREIKPDSCTHSALMKHLSKDYKL 678



 Score = 45.1 bits (105), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 31/119 (26%), Positives = 55/119 (46%), Gaps = 7/119 (5%)

Query: 56  LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNI 115
           L+ A+ +F  M     SP + ++N L   + K    D   + + ++ S G+ P+  T  I
Sbjct: 573 LDFAKKYFDEMQDKGVSPNVITYNALIYGLCKENMMDVAYNLFAEMESKGVSPNKYTYTI 632

Query: 116 LINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRL 174
           LIN   N +         ++A  L+K+M+   ++PD  T+  L+    +   L   LRL
Sbjct: 633 LINENSNLQYW-------QDALKLYKDMLDREIKPDSCTHSALMKHLSKDYKLLAVLRL 684


>gi|326505340|dbj|BAK03057.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326511084|dbj|BAJ91889.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326518326|dbj|BAJ88192.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326518558|dbj|BAJ88308.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 556

 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 129/448 (28%), Positives = 224/448 (50%), Gaps = 20/448 (4%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
           P + S+N +          D   +  R + ++ + PD  T N LI       RGLC   R
Sbjct: 118 PDVMSYNAMVAGYCVTGQLD---NARRLVAAMPMEPDTYTYNTLI-------RGLCGRGR 167

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
              A  +  +M+  G  PDV+TY  L+   C+      A++L  +M     + G     +
Sbjct: 168 TDNALAVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAVKLLDEM----RDKG--CAPD 221

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
           I +Y+++++ +C+EG VD A E    +   G  P  V    ++ G C A  WE+   L  
Sbjct: 222 IVTYNVVVNGICQEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAERWEDAEKLMA 281

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
           EM   G  PN++TFN++I  LC+ G +  A  +L+ + + G  P+  +YN ++  +C   
Sbjct: 282 EMSRKGRPPNVVTFNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPILHAFCKQK 341

Query: 313 RIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYN 372
           ++D A      M S GC   +VSYN L+   C+   V+ A+ L  Q+   G    +I+YN
Sbjct: 342 KMDRAMAFVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYN 401

Query: 373 TLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMN 432
           T++ GL +AG+   A +L +EM    ++PD+ TY+ +  GLC+   ++EA+K F  ++  
Sbjct: 402 TVIDGLTKAGKTEEALELLNEMVTKGLQPDIITYSTISSGLCREGRIEEAIKAFCKVQDM 461

Query: 433 KFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKA 492
                  ++N ++ GLCK     +A +LF  +   G +P   TY+I+I GL  +G +++A
Sbjct: 462 GIRPNTVLYNAILLGLCKRRATHSAIDLFTYMVSNGCMPNESTYTILIEGLAYEGLVKEA 521

Query: 493 NDFLLYMEKNGCAPNVVTFNTLMHGFLQ 520
            + +  +    C+  VV+   +  G ++
Sbjct: 522 REMMAEL----CSRGVVSKTLVNKGAIR 545



 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 129/480 (26%), Positives = 231/480 (48%), Gaps = 22/480 (4%)

Query: 55  NLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLN 114
           +L EA      M  ++PS       L+    A  R  +A      + V     PD ++ N
Sbjct: 71  DLEEAIRLVESMAGLEPSAAGPCAALIKKLCASGRTAEA------RRVLASCEPDVMSYN 124

Query: 115 ILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRL 174
            ++        G CV  ++  A  L   + A  + PD  TY TLI G C  G    AL +
Sbjct: 125 AMVA-------GYCVTGQLDNARRL---VAAMPMEPDTYTYNTLIRGLCGRGRTDNALAV 174

Query: 175 HKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTL 234
              M+      G +   ++ +Y+I++++ CK     +A +L  EM+ +G  P +V    +
Sbjct: 175 LDDML----RRGCVP--DVVTYTILLEATCKRSGYKQAVKLLDEMRDKGCAPDIVTYNVV 228

Query: 235 IHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGL 294
           ++G C  G  ++       +   G  PN +++N+++  LC   +  +A  L+  M ++G 
Sbjct: 229 VNGICQEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSRKGR 288

Query: 295 NPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMS 354
            P+  T+N L+   C  G ++ A EI   +   GC    +SYN +++ +CK   ++ AM+
Sbjct: 289 PPNVVTFNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMA 348

Query: 355 LYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLC 414
               ++S+G    +++YNTLL+ L + G+   A +L  ++K     P L +YN +IDGL 
Sbjct: 349 FVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLT 408

Query: 415 KNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVV 474
           K    +EA++L + +     +  I  ++ +  GLC+ GR++ A + F K+   G+ P  V
Sbjct: 409 KAGKTEEALELLNEMVTKGLQPDIITYSTISSGLCREGRIEEAIKAFCKVQDMGIRPNTV 468

Query: 475 TYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKM 534
            Y+ ++ GLC++     A D   YM  NGC PN  T+  L+ G        +  E++ ++
Sbjct: 469 LYNAILLGLCKRRATHSAIDLFTYMVSNGCMPNESTYTILIEGLAYEGLVKEAREMMAEL 528



 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 132/471 (28%), Positives = 222/471 (47%), Gaps = 54/471 (11%)

Query: 122 NKERGLCVENRIKEATWLFKNMIAFGVRPDVI-TYGTLINGFCRTGNLSVALRLHKKMVS 180
           ++ R L     ++EA  L ++M   G+ P        LI   C +G  + A R+      
Sbjct: 61  DRLRVLVRRGDLEEAIRLVESMA--GLEPSAAGPCAALIKKLCASGRTAEARRVLAS--- 115

Query: 181 GDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCC 240
                    + ++ SY+ ++   C  G +D A+ L   M    + P      TLI G C 
Sbjct: 116 --------CEPDVMSYNAMVAGYCVTGQLDNARRLVAAMP---MEPDTYTYNTLIRGLCG 164

Query: 241 AGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFT 300
            G  +    +  +ML  G  P+++T+ ++++  CK     +A  LL+ M  +G  PD  T
Sbjct: 165 RGRTDNALAVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAVKLLDEMRDKGCAPDIVT 224

Query: 301 YNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQII 360
           YN +++G C  GR+D A E   S+ S GC+   VSYNI++ G C     E+A  L  ++ 
Sbjct: 225 YNVVVNGICQEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMS 284

Query: 361 SNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYN---------------------- 398
             G    V+T+N L+S L + G    A ++ D++  Y                       
Sbjct: 285 RKGRPPNVVTFNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPILHAFCKQKKMD 344

Query: 399 -----VE--------PDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLI 445
                VE        PD+ +YN L+  LC+   V  AV+L H L+       +  +N +I
Sbjct: 345 RAMAFVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVI 404

Query: 446 DGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCA 505
           DGL KAG+ + A EL +++  KGL P ++TYS +  GLCR+G++E+A      ++  G  
Sbjct: 405 DGLTKAGKTEEALELLNEMVTKGLQPDIITYSTISSGLCREGRIEEAIKAFCKVQDMGIR 464

Query: 506 PNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLA 556
           PN V +N ++ G  +   T   ++L   M       +P+++T++I+++ LA
Sbjct: 465 PNTVLYNAILLGLCKRRATHSAIDLFTYMV--SNGCMPNESTYTILIEGLA 513



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 63/223 (28%), Positives = 106/223 (47%), Gaps = 13/223 (5%)

Query: 72  SPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVEN 131
           +P   S+N +  A  K +  D  ++F   +VS G  PD ++ N L+         LC   
Sbjct: 324 TPNSLSYNPILHAFCKQKKMDRAMAFVELMVSSGCYPDIVSYNTLLT-------ALCRGG 376

Query: 132 RIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKT 191
            +  A  L   +   G  P +I+Y T+I+G  + G    AL L  +MV+     GL  + 
Sbjct: 377 EVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTEEALELLNEMVT----KGL--QP 430

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
           +I +YS I   LC+EG +++A + F +++  GI P  V+   ++ G C          LF
Sbjct: 431 DIITYSTISSGLCREGRIEEAIKAFCKVQDMGIRPNTVLYNAILLGLCKRRATHSAIDLF 490

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGL 294
             M+  G  PN  T+ ++I+ L   G + EA  ++  +  RG+
Sbjct: 491 TYMVSNGCMPNESTYTILIEGLAYEGLVKEAREMMAELCSRGV 533


>gi|356561685|ref|XP_003549110.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
           mitochondrial-like [Glycine max]
          Length = 477

 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 135/441 (30%), Positives = 216/441 (48%), Gaps = 48/441 (10%)

Query: 63  FGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGN 122
           F  M  M+P PP   F+ +  ++ KN+HY  VIS +++  S G+ P+  TLNILINCF  
Sbjct: 81  FNRMLLMRPPPPTFHFDNILSSLVKNKHYLTVISLFKQFQSNGVTPNLCTLNILINCF-- 138

Query: 123 KERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGD 182
                C    I  A  +F N++  G  PD IT  TLI G C  G +  AL  H K+V+  
Sbjct: 139 -----CHLAHITFAFSVFANILKRGYHPDAITLNTLIKGLCFCGEIKRALYFHDKVVA-- 191

Query: 183 YENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAG 242
                                                  +G     V   TLI+G C AG
Sbjct: 192 ---------------------------------------QGFQLDQVSYGTLINGLCKAG 212

Query: 243 NWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYN 302
             + V  L  ++     +P+++ +  +I CLCK  ++ +A  L   MI +G++P+ FTYN
Sbjct: 213 ETKAVARLLRKLEGHSVKPDVVMYTTIIHCLCKNKRVGDACDLYSEMIVKGISPNVFTYN 272

Query: 303 SLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISN 362
           +L+ G+C++G +  A  +   M  K     V ++NILI+   K   ++EA+SL+ ++   
Sbjct: 273 TLIYGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALGKEGKIDEAISLFEEMKHK 332

Query: 363 GVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEA 422
            +   ++TY +L+ GL +      A  L  +MK   ++PD+ +Y IL+D LCK   ++ A
Sbjct: 333 NMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLENA 392

Query: 423 VKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHG 482
            + F  L +  +   +  +N +I+GLCKAG   +  +L  K+  KG +P  +T+  +I  
Sbjct: 393 KQFFQHLLVKGYHLNVRTYNVMINGLCKAGLFGDVMDLKSKMEGKGCMPDAITFKTIICA 452

Query: 483 LCRKGKLEKANDFLLYMEKNG 503
           L  K + +KA  FL  M   G
Sbjct: 453 LFEKDENDKAEKFLREMIARG 473



 Score =  188 bits (477), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 132/475 (27%), Positives = 218/475 (45%), Gaps = 53/475 (11%)

Query: 64  GYMTHMQPSPPISSFNLLFGAVAKNRHYD----AVISFYRKLVSIGLLPDFLTLNILINC 119
            +++   P PPI++  L   + ++   +     AV SF R L+     P F   NIL + 
Sbjct: 44  SWLSLFPPYPPIATATLHSQSHSQPHSHHHHHHAVASFNRMLLMRPPPPTFHFDNILSSL 103

Query: 120 FGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMV 179
             NK     +         LFK   + GV P++ T   LIN FC   +++          
Sbjct: 104 VKNKHYLTVIS--------LFKQFQSNGVTPNLCTLNILINCFCHLAHIT---------- 145

Query: 180 SGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFC 239
                         F++S+                 F  +  RG +P  +   TLI G C
Sbjct: 146 --------------FAFSV-----------------FANILKRGYHPDAITLNTLIKGLC 174

Query: 240 CAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRF 299
             G  +       +++  G + + +++  +I+ LCK G+      LL  +    + PD  
Sbjct: 175 FCGEIKRALYFHDKVVAQGFQLDQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDVV 234

Query: 300 TYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQI 359
            Y +++   C   R+  A +++  M  KG    V +YN LI G+C + N++EA SL  ++
Sbjct: 235 MYTTIIHCLCKNKRVGDACDLYSEMIVKGISPNVFTYNTLIYGFCIMGNLKEAFSLLNEM 294

Query: 360 ISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCV 419
               +   V T+N L+  L + G+   A  LF+EMK  N+ P++ TY  LIDGLCKN+ +
Sbjct: 295 KLKNINPDVYTFNILIDALGKEGKIDEAISLFEEMKHKNMFPNIVTYTSLIDGLCKNHHL 354

Query: 420 QEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIM 479
           + A+ L   ++    +  +  +  L+D LCK GRL+NA + F  L  KG    V TY++M
Sbjct: 355 ERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKQFFQHLLVKGYHLNVRTYNVM 414

Query: 480 IHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKM 534
           I+GLC+ G      D    ME  GC P+ +TF T++    + ++  K  + L +M
Sbjct: 415 INGLCKAGLFGDVMDLKSKMEGKGCMPDAITFKTIICALFEKDENDKAEKFLREM 469



 Score =  145 bits (365), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 83/307 (27%), Positives = 159/307 (51%), Gaps = 2/307 (0%)

Query: 251 FIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCL 310
           F  ML + P P    F+ ++  L K         L +     G+ P+  T N L++ +C 
Sbjct: 81  FNRMLLMRPPPPTFHFDNILSSLVKNKHYLTVISLFKQFQSNGVTPNLCTLNILINCFCH 140

Query: 311 VGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVIT 370
           +  I  A  +F ++  +G     ++ N LI G C    ++ A+  + ++++ G +   ++
Sbjct: 141 LAHITFAFSVFANILKRGYHPDAITLNTLIKGLCFCGEIKRALYFHDKVVAQGFQLDQVS 200

Query: 371 YNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLE 430
           Y TL++GL +AG+     +L  +++ ++V+PD+  Y  +I  LCKN  V +A  L+  + 
Sbjct: 201 YGTLINGLCKAGETKAVARLLRKLEGHSVKPDVVMYTTIIHCLCKNKRVGDACDLYSEMI 260

Query: 431 MNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLE 490
           +      +  +N LI G C  G L  A+ L +++  K + P V T++I+I  L ++GK++
Sbjct: 261 VKGISPNVFTYNTLIYGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALGKEGKID 320

Query: 491 KANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSI 550
           +A      M+     PN+VT+ +L+ G  +N+   + + L  KM   E+ + PD  +++I
Sbjct: 321 EAISLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMK--EQGIQPDVYSYTI 378

Query: 551 VVDLLAK 557
           ++D L K
Sbjct: 379 LLDALCK 385



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 85/288 (29%), Positives = 147/288 (51%), Gaps = 13/288 (4%)

Query: 77  SFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEA 136
           S+  L   + K     AV    RKL    + PD +    +I+C       LC   R+ +A
Sbjct: 200 SYGTLINGLCKAGETKAVARLLRKLEGHSVKPDVVMYTTIIHC-------LCKNKRVGDA 252

Query: 137 TWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSY 196
             L+  MI  G+ P+V TY TLI GFC  GNL  A  L  +M   +         +++++
Sbjct: 253 CDLYSEMIVKGISPNVFTYNTLIYGFCIMGNLKEAFSLLNEMKLKNIN------PDVYTF 306

Query: 197 SIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLD 256
           +I+ID+L KEG +D+A  LF EMK + + P +V  T+LI G C   + E    L  +M +
Sbjct: 307 NILIDALGKEGKIDEAISLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKE 366

Query: 257 LGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDT 316
            G +P++ ++ +++D LCKGG++  A    + ++ +G + +  TYN +++G C  G    
Sbjct: 367 QGIQPDVYSYTILLDALCKGGRLENAKQFFQHLLVKGYHLNVRTYNVMINGLCKAGLFGD 426

Query: 317 AREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGV 364
             ++   M  KGC    +++  +I    +    ++A    R++I+ G+
Sbjct: 427 VMDLKSKMEGKGCMPDAITFKTIICALFEKDENDKAEKFLREMIARGL 474


>gi|242094006|ref|XP_002437493.1| hypothetical protein SORBIDRAFT_10g028090 [Sorghum bicolor]
 gi|241915716|gb|EER88860.1| hypothetical protein SORBIDRAFT_10g028090 [Sorghum bicolor]
          Length = 1039

 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 146/495 (29%), Positives = 241/495 (48%), Gaps = 19/495 (3%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
           P   ++N +  A  K         ++R L   G+  D  T N L+        G C    
Sbjct: 181 PDTVTYNTMIMAYCKEGSLAIAHRYFRLLRESGMEMDTYTCNALL-------LGYCRTGD 233

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
           +++A WL   M   G R +  +Y  LI G C T  +  AL L   M+    ++G     N
Sbjct: 234 LRKACWLLMMMPLMGCRRNEYSYTILIQGLCETRCVREALVLLLMML----QDG--CSPN 287

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
           + +Y+++I  LCKEG +  A+ L  EM  RG+ P+V     +I G+C +G  ++  G+  
Sbjct: 288 LHTYTLLIRGLCKEGRIHDARVLLDEMPRRGVVPSVWTYNAMIDGYCKSGRLKDALGIKT 347

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
            M   G  P+  T+N +I  LC GGK +EA  LL   I RG +P   T+ ++++GYC   
Sbjct: 348 LMEGNGCNPDDWTYNSLIHGLC-GGKPDEAEELLNGAIARGFSPTVITFTNIINGYCKAE 406

Query: 313 RIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYN 372
           +ID A  +   M S  CK  + +Y +LI+   K   ++EA     +I +NG+   V+ Y 
Sbjct: 407 KIDDALRVKSIMISSKCKLDLQAYGVLISVLIKKHRLKEAKDTLNEIFANGLSPNVVIYT 466

Query: 373 TLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMN 432
           +++    + G+ G A ++F   +     P+  TY+ LI GL ++  + +A+ L   ++ +
Sbjct: 467 SIIDAYCKVGKVGAALEVFKLTEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQED 526

Query: 433 KFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKA 492
               G+  +  LI G CK    DNA+ LF  + Q GL P    Y+++   LC+ G+ E+A
Sbjct: 527 GITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEA 586

Query: 493 NDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVV 552
             FL+   K G     VT+ +L+ GF +   T     L+ KM         D  T+S+++
Sbjct: 587 YSFLV---KKGVVLTKVTYTSLVDGFSKAGNTEFAAALIEKMV--NEGCKADSHTYSVLL 641

Query: 553 DLLAKDEKYHECSAV 567
             L K +K +E  ++
Sbjct: 642 QALCKQKKLNEALSI 656



 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 136/469 (28%), Positives = 229/469 (48%), Gaps = 19/469 (4%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CK G I+  +AR     M      P + ++N +     K+      +     +   G  P
Sbjct: 299 CKEGRIH--DARVLLDEMPRRGVVPSVWTYNAMIDGYCKSGRLKDALGIKTLMEGNGCNP 356

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           D  T N LI+       GLC   +  EA  L    IA G  P VIT+  +ING+C+   +
Sbjct: 357 DDWTYNSLIH-------GLC-GGKPDEAEELLNGAIARGFSPTVITFTNIINGYCKAEKI 408

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
             ALR+   M+S         K ++ +Y ++I  L K+  + +AK+   E+   G++P V
Sbjct: 409 DDALRVKSIMISSK------CKLDLQAYGVLISVLIKKHRLKEAKDTLNEIFANGLSPNV 462

Query: 229 VVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLEL 288
           V+ T++I  +C  G       +F      G RPN  T++ +I  L +  K+++A  L+  
Sbjct: 463 VIYTSIIDAYCKVGKVGAALEVFKLTEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITK 522

Query: 289 MIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILN 348
           M + G+ P   TY +L+ G C     D A  +F  M   G      +YN+L +  CK   
Sbjct: 523 MQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGR 582

Query: 349 VEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNI 408
            EEA S    ++  GV  T +TY +L+ G  +AG   +A  L ++M     + D  TY++
Sbjct: 583 AEEAYSF---LVKKGVVLTKVTYTSLVDGFSKAGNTEFAAALIEKMVNEGCKADSHTYSV 639

Query: 409 LIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKG 468
           L+  LCK   + EA+ +   + +   +  I  +  +I  + K G+ D+A  +F+++   G
Sbjct: 640 LLQALCKQKKLNEALSILDQMTLRGVKGNIVAYTIIISEMIKEGKHDHAKSMFNEMISSG 699

Query: 469 LVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHG 517
             P+ +TY++ I   C+ G++E+A   +  ME+NG AP+VVT+N  ++G
Sbjct: 700 HKPSAITYTVFISSYCKIGRIEEAGHLIGEMERNGVAPDVVTYNVFING 748



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 132/444 (29%), Positives = 210/444 (47%), Gaps = 35/444 (7%)

Query: 72  SPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVEN 131
           SP +  +  +  A  K     A +  ++     G  P+  T + LI        GL  + 
Sbjct: 459 SPNVVIYTSIIDAYCKVGKVGAALEVFKLTEHEGCRPNAWTYSSLI-------YGLIQDQ 511

Query: 132 RIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKT 191
           ++ +A  L   M   G+ P VITY TLI G C+      A RL + M     +NGL    
Sbjct: 512 KLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMM----EQNGLTPDE 567

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
              +Y+++ D+LCK G   +A+E +  +  +G+    V  T+L+ GF  AGN E    L 
Sbjct: 568 Q--AYNVLTDALCKSG---RAEEAYSFLVKKGVVLTKVTYTSLVDGFSKAGNTEFAAALI 622

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
            +M++ G + +  T++V++  LCK  K+NEA  +L+ M  RG+  +   Y  ++      
Sbjct: 623 EKMVNEGCKADSHTYSVLLQALCKQKKLNEALSILDQMTLRGVKGNIVAYTIIISEMIKE 682

Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
           G+ D A+ +F  M S G K + ++Y + I+ YCKI  +EEA  L  ++  NGV   V+TY
Sbjct: 683 GKHDHAKSMFNEMISSGHKPSAITYTVFISSYCKIGRIEEAGHLIGEMERNGVAPDVVTY 742

Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
           N  ++G    G  GY    F            ST   +ID  C+ N     + L H L+M
Sbjct: 743 NVFING---CGHMGYMDCAF------------STLKRMIDASCEPNYWTYWLLLKHFLKM 787

Query: 432 NKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEK 491
           +              G+    +LD  W+L  ++ + GL PT VTYS +I G C+  +LE+
Sbjct: 788 SL----ANAHYVDTSGMWNWIKLDTVWQLLERMVKHGLNPTAVTYSSIIAGFCKATRLEE 843

Query: 492 ANDFLLYMEKNGCAPNVVTFNTLM 515
           A   L +M     +PN   +  L+
Sbjct: 844 ACVLLDHMLGKDISPNEEIYTMLI 867



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 122/496 (24%), Positives = 219/496 (44%), Gaps = 45/496 (9%)

Query: 46  HENCKS----------GIINLNEARYFFGYMTHMQP---SPPISSFNLLFGAVAKNRHYD 92
           HE C+           G+I   +       +T MQ    +P + ++  L     K   +D
Sbjct: 490 HEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFD 549

Query: 93  AVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDV 152
                +  +   GL PD    N+L +        LC   R +EA   +  ++  GV    
Sbjct: 550 NAFRLFEMMEQNGLTPDEQAYNVLTD-------ALCKSGRAEEA---YSFLVKKGVVLTK 599

Query: 153 ITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKA 212
           +TY +L++GF + GN   A  L +KMV+         K +  +YS+++ +LCK+  +++A
Sbjct: 600 VTYTSLVDGFSKAGNTEFAAALIEKMVNEG------CKADSHTYSVLLQALCKQKKLNEA 653

Query: 213 KELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDC 272
             +  +M  RG+   +V  T +I      G  +    +F EM+  G +P+ +T+ V I  
Sbjct: 654 LSILDQMTLRGVKGNIVAYTIIISEMIKEGKHDHAKSMFNEMISSGHKPSAITYTVFISS 713

Query: 273 LCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHT 332
            CK G+I EA  L+  M + G+ PD  TYN  ++G   +G +D A      M    C+  
Sbjct: 714 YCKIGRIEEAGHLIGEMERNGVAPDVVTYNVFINGCGHMGYMDCAFSTLKRMIDASCEPN 773

Query: 333 VVSYNILINGYCKI----------------LNVEEAMSLYRQIISNGVRQTVITYNTLLS 376
             +Y +L+  + K+                + ++    L  +++ +G+  T +TY+++++
Sbjct: 774 YWTYWLLLKHFLKMSLANAHYVDTSGMWNWIKLDTVWQLLERMVKHGLNPTAVTYSSIIA 833

Query: 377 GLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEF 436
           G  +A +   A  L D M   ++ P+   Y +LI   C     ++A      +    F+ 
Sbjct: 834 GFCKATRLEEACVLLDHMLGKDISPNEEIYTMLIKCCCDIKLFEKAASFVTNMIECGFQP 893

Query: 437 GIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFL 496
            +E ++ LI GLC  G  D A  LF  L +       V + I+  GL + G ++  +  L
Sbjct: 894 HLESYHYLITGLCDEGDYDKAKALFCDLLEMDYNHNEVAWKILNDGLLKAGHVDICSQLL 953

Query: 497 LYMEKNGCAPNVVTFN 512
             ME   C  +  T++
Sbjct: 954 SAMENRHCRIDSETYS 969



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 105/358 (29%), Positives = 177/358 (49%), Gaps = 38/358 (10%)

Query: 245 EEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSL 304
           E +  L+ +++  G  P+ +T+N MI   CK G +  A+    L+ + G+  D +T N+L
Sbjct: 165 EHMGKLYSQLVQEGLLPDTVTYNTMIMAYCKEGSLAIAHRYFRLLRESGMEMDTYTCNAL 224

Query: 305 MDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGV 364
           + GYC  G +  A  + + M   GC+    SY ILI G C+   V EA+ L   ++ +G 
Sbjct: 225 LLGYCRTGDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCETRCVREALVLLLMMLQDGC 284

Query: 365 RQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVK 424
              + TY  L+ GL + G+   A+ L DEM    V P + TYN +IDG CK+  +++A+ 
Sbjct: 285 SPNLHTYTLLIRGLCKEGRIHDARVLLDEMPRRGVVPSVWTYNAMIDGYCKSGRLKDALG 344

Query: 425 LFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLC 484
           +  ++E N        +N LI GLC  G+ D A EL +    +G  PTV+T++ +I+G C
Sbjct: 345 IKTLMEGNGCNPDDWTYNSLIHGLC-GGKPDEAEELLNGAIARGFSPTVITFTNIINGYC 403

Query: 485 -----------------------------------RKGKLEKANDFLLYMEKNGCAPNVV 509
                                              +K +L++A D L  +  NG +PNVV
Sbjct: 404 KAEKIDDALRVKSIMISSKCKLDLQAYGVLISVLIKKHRLKEAKDTLNEIFANGLSPNVV 463

Query: 510 TFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAV 567
            + +++  + +  K    +E+  K+ E E    P+  T+S ++  L +D+K H+  A+
Sbjct: 464 IYTSIIDAYCKVGKVGAALEVF-KLTEHE-GCRPNAWTYSSLIYGLIQDQKLHKAMAL 519



 Score =  112 bits (280), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 88/343 (25%), Positives = 142/343 (41%), Gaps = 29/343 (8%)

Query: 55  NLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLN 114
            LNEA      MT       I ++ ++   + K   +D   S + +++S G  P  +T  
Sbjct: 649 KLNEALSILDQMTLRGVKGNIVAYTIIISEMIKEGKHDHAKSMFNEMISSGHKPSAITYT 708

Query: 115 ILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRL 174
           + I+ +       C   RI+EA  L   M   GV PDV+TY   ING    G +  A   
Sbjct: 709 VFISSY-------CKIGRIEEAGHLIGEMERNGVAPDVVTYNVFINGCGHMGYMDCAFST 761

Query: 175 HKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGL----------------VDKAKELFLE 218
            K+M+    E       N ++Y +++    K  L                +D   +L   
Sbjct: 762 LKRMIDASCE------PNYWTYWLLLKHFLKMSLANAHYVDTSGMWNWIKLDTVWQLLER 815

Query: 219 MKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGK 278
           M   G+NP  V  +++I GFC A   EE   L   ML     PN   + ++I C C    
Sbjct: 816 MVKHGLNPTAVTYSSIIAGFCKATRLEEACVLLDHMLGKDISPNEEIYTMLIKCCCDIKL 875

Query: 279 INEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNI 338
             +A   +  MI+ G  P   +Y+ L+ G C  G  D A+ +F  +      H  V++ I
Sbjct: 876 FEKAASFVTNMIECGFQPHLESYHYLITGLCDEGDYDKAKALFCDLLEMDYNHNEVAWKI 935

Query: 339 LINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQA 381
           L +G  K  +V+    L   + +   R    TY+ + + + +A
Sbjct: 936 LNDGLLKAGHVDICSQLLSAMENRHCRIDSETYSMVTNNIHEA 978


>gi|356547426|ref|XP_003542113.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Glycine max]
          Length = 825

 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 151/552 (27%), Positives = 263/552 (47%), Gaps = 63/552 (11%)

Query: 55  NLNEARYFFGYMTHMQPS-PPISSFNLLFGAVAKNRHYDAVISFYRKLVSI----GLLPD 109
           +L+ A   F  +  M    P   + NLL   + K+   D  +  Y K++      G + D
Sbjct: 145 SLDRALQLFHTVREMHNCFPTFVASNLLLNGLVKSGKVDVALQLYDKMLQTDDGTGAVVD 204

Query: 110 FLTLNILINCFGN-----------KER-----------------GLCVENRIKEATWLFK 141
             T +I++    N           K R                 G C +  ++ AT    
Sbjct: 205 NYTTSIMVKGLCNLGKIEEGRRLIKHRWGKCCVPHVVFYNMIIDGYCKKGDLQCATRALN 264

Query: 142 NMIAFGVRPDVITYGTLINGFCRTGN---------------LSVALRLHKKMVSGDYENG 186
            +   GV P V TYG LINGFC+ G                L++ +++   ++  +Y+ G
Sbjct: 265 ELKMKGVLPTVETYGALINGFCKAGEFEAVDQLLTEMAARGLNMNVKVFNNVIDAEYKYG 324

Query: 187 LISKT--------------NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCT 232
           L+++               +I +Y+I+I+  CK G +++A EL  + K RG+ P     T
Sbjct: 325 LVTEAAEMLRRMAEMGCGPDITTYNIMINFSCKGGRIEEADELLEKAKERGLLPNKFSYT 384

Query: 233 TLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQR 292
            L+H +C  G++ + +G+   + ++G + +L+++   I  +   G+I+ A  + E M+++
Sbjct: 385 PLMHAYCKKGDYVKASGMLFRIAEIGEKSDLVSYGAFIHGVVVAGEIDVALMVREKMMEK 444

Query: 293 GLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEA 352
           G+ PD   YN LM G C  GRI   + +   M  +  +  V  +  LI+G+ +   ++EA
Sbjct: 445 GVFPDAQIYNILMSGLCKKGRIPAMKLLLSEMLDRNVQPDVYVFATLIDGFIRNGELDEA 504

Query: 353 MSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDG 412
           + +++ II  GV   ++ YN ++ G  + G+   A    +EM   +  PD  TY+ +IDG
Sbjct: 505 IKIFKVIIRKGVDPGIVGYNAMIKGFCKFGKMTDALSCLNEMNSVHHAPDEYTYSTVIDG 564

Query: 413 LCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPT 472
             K + +  A+K+F  +  +KF+  +  +  LI+G CK   +  A ++F  +    LVP 
Sbjct: 565 YVKQHDMSSALKMFGQMMKHKFKPNVITYTSLINGFCKKADMIRAEKVFSGMKSFDLVPN 624

Query: 473 VVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLH 532
           VVTY+ ++ G  + GK E+A      M  NGC PN  TF+ L++G L N  TS V+    
Sbjct: 625 VVTYTTLVGGFFKAGKPERATSIFELMLMNGCLPNDATFHYLING-LTNTATSPVLIEEK 683

Query: 533 KMAEPERNLVPD 544
              E ER+L+ D
Sbjct: 684 DSKENERSLILD 695



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 142/493 (28%), Positives = 240/493 (48%), Gaps = 26/493 (5%)

Query: 68  HMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSI-GLLPDFLTLNILINCFGNKERG 126
           H++P+    +F+ L  A A++   D  +  +  +  +    P F+  N+L+N       G
Sbjct: 125 HLKPTR--EAFSALILAYAESGSLDRALQLFHTVREMHNCFPTFVASNLLLN-------G 175

Query: 127 LCVENRIKEATWLFKNMI----AFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGD 182
           L    ++  A  L+  M+      G   D  T   ++ G C  G +    RL K      
Sbjct: 176 LVKSGKVDVALQLYDKMLQTDDGTGAVVDNYTTSIMVKGLCNLGKIEEGRRLIK------ 229

Query: 183 YENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAG 242
           +  G     ++  Y++IID  CK+G +  A     E+K +G+ P V     LI+GFC AG
Sbjct: 230 HRWGKCCVPHVVFYNMIIDGYCKKGDLQCATRALNELKMKGVLPTVETYGALINGFCKAG 289

Query: 243 NWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYN 302
            +E V+ L  EM   G   N+  FN +ID   K G + EA  +L  M + G  PD  TYN
Sbjct: 290 EFEAVDQLLTEMAARGLNMNVKVFNNVIDAEYKYGLVTEAAEMLRRMAEMGCGPDITTYN 349

Query: 303 SLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISN 362
            +++  C  GRI+ A E+      +G      SY  L++ YCK  +  +A  +  +I   
Sbjct: 350 IMINFSCKGGRIEEADELLEKAKERGLLPNKFSYTPLMHAYCKKGDYVKASGMLFRIAEI 409

Query: 363 GVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEA 422
           G +  +++Y   + G+  AG+   A  + ++M    V PD   YNIL+ GLCK   +  A
Sbjct: 410 GEKSDLVSYGAFIHGVVVAGEIDVALMVREKMMEKGVFPDAQIYNILMSGLCKKGRI-PA 468

Query: 423 VKLF--HMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMI 480
           +KL    ML+ N  +  + +F  LIDG  + G LD A ++F  + +KG+ P +V Y+ MI
Sbjct: 469 MKLLLSEMLDRN-VQPDVYVFATLIDGFIRNGELDEAIKIFKVIIRKGVDPGIVGYNAMI 527

Query: 481 HGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERN 540
            G C+ GK+  A   L  M     AP+  T++T++ G+++ +  S  +++  +M   +  
Sbjct: 528 KGFCKFGKMTDALSCLNEMNSVHHAPDEYTYSTVIDGYVKQHDMSSALKMFGQMM--KHK 585

Query: 541 LVPDDTTFSIVVD 553
             P+  T++ +++
Sbjct: 586 FKPNVITYTSLIN 598



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 146/534 (27%), Positives = 249/534 (46%), Gaps = 40/534 (7%)

Query: 41  LNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRK 100
            N  +    K G++   EA      M  M   P I+++N++     K    +       K
Sbjct: 313 FNNVIDAEYKYGLVT--EAAEMLRRMAEMGCGPDITTYNIMINFSCKGGRIEEADELLEK 370

Query: 101 LVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLIN 160
               GLLP+  +   L++ +  K       + +K +  LF+ +   G + D+++YG  I+
Sbjct: 371 AKERGLLPNKFSYTPLMHAYCKKG------DYVKASGMLFR-IAEIGEKSDLVSYGAFIH 423

Query: 161 GFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMK 220
           G    G + VAL + +KM+    E G+     I  Y+I++  LCK+G +   K L  EM 
Sbjct: 424 GVVVAGEIDVALMVREKMM----EKGVFPDAQI--YNILMSGLCKKGRIPAMKLLLSEML 477

Query: 221 GRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKIN 280
            R + P V V  TLI GF   G  +E   +F  ++  G  P ++ +N MI   CK GK+ 
Sbjct: 478 DRNVQPDVYVFATLIDGFIRNGELDEAIKIFKVIIRKGVDPGIVGYNAMIKGFCKFGKMT 537

Query: 281 EANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILI 340
           +A   L  M      PD +TY++++DGY     + +A ++F  M     K  V++Y  LI
Sbjct: 538 DALSCLNEMNSVHHAPDEYTYSTVIDGYVKQHDMSSALKMFGQMMKHKFKPNVITYTSLI 597

Query: 341 NGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVE 400
           NG+CK  ++  A  ++  + S  +   V+TY TL+ G F+AG+   A  +F+ M +    
Sbjct: 598 NGFCKKADMIRAEKVFSGMKSFDLVPNVVTYTTLVGGFFKAGKPERATSIFELMLMNGCL 657

Query: 401 PDLSTYNILIDGLC--------------KNNCVQEAVKLFHMLEMNKFEFGIEIFNCLID 446
           P+ +T++ LI+GL               K N     +  F M+ ++ ++  I  +N +I 
Sbjct: 658 PNDATFHYLINGLTNTATSPVLIEEKDSKENERSLILDFFTMMLLDGWDQVIAAYNSVIV 717

Query: 447 GLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAP 506
            LCK G +D A  L  K+  KG +   V ++ ++HGLC KGK ++  + +          
Sbjct: 718 CLCKHGTVDTAQLLLTKMLTKGFLIDSVCFTALLHGLCHKGKSKEWRNIISCDLNKIELQ 777

Query: 507 NVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEK 560
             V ++  +  +L   + S+   +L  + E        D+ FS   D + KD K
Sbjct: 778 TAVKYSLTLDKYLYQGRLSEASVILQTLVE--------DSKFS---DQVEKDLK 820



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 136/560 (24%), Positives = 229/560 (40%), Gaps = 145/560 (25%)

Query: 135 EATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLS------------------------- 169
           E   + +NM A  ++P    +  LI  +  +G+L                          
Sbjct: 113 EIELVLENMKAQHLKPTREAFSALILAYAESGSLDRALQLFHTVREMHNCFPTFVASNLL 172

Query: 170 -----------VALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFL- 217
                      VAL+L+ KM+  D   G +   + ++ SI++  LC  G +++ + L   
Sbjct: 173 LNGLVKSGKVDVALQLYDKMLQTDDGTGAV--VDNYTTSIMVKGLCNLGKIEEGRRLIKH 230

Query: 218 ----------------------------------EMKGRGINPAVVVCTTLIHGFCCAGN 243
                                             E+K +G+ P V     LI+GFC AG 
Sbjct: 231 RWGKCCVPHVVFYNMIIDGYCKKGDLQCATRALNELKMKGVLPTVETYGALINGFCKAGE 290

Query: 244 WEEVNGLFIE-----------------------------------MLDLGPRPNLLTFNV 268
           +E V+ L  E                                   M ++G  P++ T+N+
Sbjct: 291 FEAVDQLLTEMAARGLNMNVKVFNNVIDAEYKYGLVTEAAEMLRRMAEMGCGPDITTYNI 350

Query: 269 MIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKG 328
           MI+  CKGG+I EA+ LLE   +RGL P++F+Y  LM  YC  G    A  +   +   G
Sbjct: 351 MINFSCKGGRIEEADELLEKAKERGLLPNKFSYTPLMHAYCKKGDYVKASGMLFRIAEIG 410

Query: 329 CKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQ 388
            K  +VSY   I+G      ++ A+ +  +++  GV      YN L+SGL + G+    +
Sbjct: 411 EKSDLVSYGAFIHGVVVAGEIDVALMVREKMMEKGVFPDAQIYNILMSGLCKKGRIPAMK 470

Query: 389 KLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGL 448
            L  EM   NV+PD+  +  LIDG  +N  + EA+K+F ++     + GI  +N +I G 
Sbjct: 471 LLLSEMLDRNVQPDVYVFATLIDGFIRNGELDEAIKIFKVIIRKGVDPGIVGYNAMIKGF 530

Query: 449 CKAGRLDN-----------------------------------AWELFHKLPQKGLVPTV 473
           CK G++ +                                   A ++F ++ +    P V
Sbjct: 531 CKFGKMTDALSCLNEMNSVHHAPDEYTYSTVIDGYVKQHDMSSALKMFGQMMKHKFKPNV 590

Query: 474 VTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHK 533
           +TY+ +I+G C+K  + +A      M+     PNVVT+ TL+ GF +  K  +   +   
Sbjct: 591 ITYTSLINGFCKKADMIRAEKVFSGMKSFDLVPNVVTYTTLVGGFFKAGKPERATSIFEL 650

Query: 534 MAEPERNLVPDDTTFSIVVD 553
           M       +P+D TF  +++
Sbjct: 651 ML--MNGCLPNDATFHYLIN 668


>gi|255547043|ref|XP_002514579.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223546183|gb|EEF47685.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 840

 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 162/573 (28%), Positives = 271/573 (47%), Gaps = 33/573 (5%)

Query: 12  SSETVSKVKLSSLFKSPR-QIAAVSSPETQLNEF----------LHENCKSGIINLNEAR 60
            SE  S + +  L +  R Q A +   +T+  EF          +   CK G +++  A+
Sbjct: 244 QSEYTSSIVVDGLCRQSRFQDAVLFFQDTEGKEFQPSVVSFNTIMSRYCKLGFVDV--AK 301

Query: 61  YFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCF 120
            FF  M      P   S+N+L   +         +     + + GL PD +T NIL    
Sbjct: 302 SFFCMMLKHGLLPDAYSYNILIHGLCIAGSMGEALDLKNDMENHGLEPDMVTYNIL---- 357

Query: 121 GNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVS 180
               +G  +   I  A  + + M+  G  P+++TY  LI G C+ GN+  AL+L+K+M+S
Sbjct: 358 ---AKGFRLLGLINGAWNIIQKMLIKGPNPNLVTYTVLICGHCQIGNVEEALKLYKEMIS 414

Query: 181 GDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCC 240
             ++  +IS T      +++ SLCK   VD A +LF EM+  G+ P ++  +TLIHG C 
Sbjct: 415 HGFQLSIISST------VLLGSLCKSRQVDVAFKLFCEMEANGLRPDLITYSTLIHGLCK 468

Query: 241 AGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFT 300
            G  ++   L+ +M      PN L    ++  LC+ GKI++A    + +I   L+ D   
Sbjct: 469 QGEVQQAILLYEKMCSNRIIPNSLIHGAILMGLCEKGKISQARMYFDYLITSNLSLDIIL 528

Query: 301 YNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQII 360
           YN ++DGY   G    A +++  +  KG   T+V++N L+ G+C    + +A  L   I 
Sbjct: 529 YNIMIDGYIKRGNTREAVKLYKQLGEKGISPTIVTFNSLMYGFCINRKLSQARRLLDTIK 588

Query: 361 SNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQ 420
            +G+    +TY TL++   + G      +L  EMK   + P   TY ++I GLCK   +Q
Sbjct: 589 LHGLEPNAVTYTTLMNVYCEEGNMQSLLELLSEMKAKAIGPTHITYTVVIKGLCKQWKLQ 648

Query: 421 EAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMI 480
           E+ +L   ++          +N +I   CKA  +  A++L+ K+    L PT VTY+I+I
Sbjct: 649 ESCQLLEDMDAVGLTPDQVSYNTIIQAFCKARDMRKAFQLYDKMLLHNLEPTSVTYNILI 708

Query: 481 HGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERN 540
           +G C  G L+ A++ L+ ++      N   + T++          K V    +M E    
Sbjct: 709 NGFCVYGDLKDADNLLVSLQNRKVNLNKYAYTTIIKAHCAKGDVDKAVVYFRQMVEKGFE 768

Query: 541 LVPDDTTFSIVVDLLAK-----DEKYHECSAVS 568
           +   D  +S V+  L K     + KY  C  +S
Sbjct: 769 VSIRD--YSAVIGRLCKRCLVTEAKYFFCMMLS 799



 Score =  208 bits (529), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 129/464 (27%), Positives = 237/464 (51%), Gaps = 13/464 (2%)

Query: 71  PSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVE 130
           P+P + ++ +L     +  + +  +  Y++++S G     ++  +L+         LC  
Sbjct: 382 PNPNLVTYTVLICGHCQIGNVEEALKLYKEMISHGFQLSIISSTVLLG-------SLCKS 434

Query: 131 NRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISK 190
            ++  A  LF  M A G+RPD+ITY TLI+G C+ G +  A+ L++KM S    N +I  
Sbjct: 435 RQVDVAFKLFCEMEANGLRPDLITYSTLIHGLCKQGEVQQAILLYEKMCS----NRIIPN 490

Query: 191 TNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGL 250
           + I  +  I+  LC++G + +A+  F  +    ++  +++   +I G+   GN  E   L
Sbjct: 491 SLI--HGAILMGLCEKGKISQARMYFDYLITSNLSLDIILYNIMIDGYIKRGNTREAVKL 548

Query: 251 FIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCL 310
           + ++ + G  P ++TFN ++   C   K+++A  LL+ +   GL P+  TY +LM+ YC 
Sbjct: 549 YKQLGEKGISPTIVTFNSLMYGFCINRKLSQARRLLDTIKLHGLEPNAVTYTTLMNVYCE 608

Query: 311 VGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVIT 370
            G + +  E+   M +K    T ++Y ++I G CK   ++E+  L   + + G+    ++
Sbjct: 609 EGNMQSLLELLSEMKAKAIGPTHITYTVVIKGLCKQWKLQESCQLLEDMDAVGLTPDQVS 668

Query: 371 YNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLE 430
           YNT++    +A     A +L+D+M L+N+EP   TYNILI+G C    +++A  L   L+
Sbjct: 669 YNTIIQAFCKARDMRKAFQLYDKMLLHNLEPTSVTYNILINGFCVYGDLKDADNLLVSLQ 728

Query: 431 MNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLE 490
             K       +  +I   C  G +D A   F ++ +KG   ++  YS +I  LC++  + 
Sbjct: 729 NRKVNLNKYAYTTIIKAHCAKGDVDKAVVYFRQMVEKGFEVSIRDYSAVIGRLCKRCLVT 788

Query: 491 KANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKM 534
           +A  F   M  +G  P+   F  L++ F Q    +   ELL +M
Sbjct: 789 EAKYFFCMMLSDGVCPDQDLFEVLLNAFHQCGHLNSEFELLAEM 832



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 135/500 (27%), Positives = 242/500 (48%), Gaps = 50/500 (10%)

Query: 89  RHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGV 148
           RH + +   Y ++   G      T +I+++       GLC ++R ++A   F++      
Sbjct: 225 RHSNIMWDVYNEIKVSGTPQSEYTSSIVVD-------GLCRQSRFQDAVLFFQDTEGKEF 277

Query: 149 RPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGL 208
           +P V+++ T+++ +C+ G + VA      M+    ++GL+   + +SY+I+I  LC  G 
Sbjct: 278 QPSVVSFNTIMSRYCKLGFVDVAKSFFCMML----KHGLLP--DAYSYNILIHGLCIAGS 331

Query: 209 VDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNV 268
           + +A +L  +M+  G+ P +V    L  GF   G       +  +ML  GP PNL+T+ V
Sbjct: 332 MGEALDLKNDMENHGLEPDMVTYNILAKGFRLLGLINGAWNIIQKMLIKGPNPNLVTYTV 391

Query: 269 MIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKG 328
           +I   C+ G + EA  L + MI  G      +   L+   C   ++D A ++F  M + G
Sbjct: 392 LICGHCQIGNVEEALKLYKEMISHGFQLSIISSTVLLGSLCKSRQVDVAFKLFCEMEANG 451

Query: 329 CKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQ 388
            +  +++Y+ LI+G CK   V++A+ LY ++ SN +    + +  +L GL + G+   A+
Sbjct: 452 LRPDLITYSTLIHGLCKQGEVQQAILLYEKMCSNRIIPNSLIHGAILMGLCEKGKISQAR 511

Query: 389 KLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGL 448
             FD +   N+  D+  YNI+IDG  K    +EAVKL+  L        I  FN L+ G 
Sbjct: 512 MYFDYLITSNLSLDIILYNIMIDGYIKRGNTREAVKLYKQLGEKGISPTIVTFNSLMYGF 571

Query: 449 -----------------------------------CKAGRLDNAWELFHKLPQKGLVPTV 473
                                              C+ G + +  EL  ++  K + PT 
Sbjct: 572 CINRKLSQARRLLDTIKLHGLEPNAVTYTTLMNVYCEEGNMQSLLELLSEMKAKAIGPTH 631

Query: 474 VTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHK 533
           +TY+++I GLC++ KL+++   L  M+  G  P+ V++NT++  F +     K  +L  K
Sbjct: 632 ITYTVVIKGLCKQWKLQESCQLLEDMDAVGLTPDQVSYNTIIQAFCKARDMRKAFQLYDK 691

Query: 534 MAEPERNLVPDDTTFSIVVD 553
           M     NL P   T++I+++
Sbjct: 692 ML--LHNLEPTSVTYNILIN 709



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 61/219 (27%), Positives = 112/219 (51%), Gaps = 5/219 (2%)

Query: 334 VSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDE 393
           V +++L   Y +   V +A+ +  ++       ++ TYN+LL  L     +     +++E
Sbjct: 180 VVWDMLACAYSRSAMVHDALFVLVKMKDLNFIVSIQTYNSLLYNL---RHSNIMWDVYNE 236

Query: 394 MKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGR 453
           +K+        T +I++DGLC+ +  Q+AV  F   E  +F+  +  FN ++   CK G 
Sbjct: 237 IKVSGTPQSEYTSSIVVDGLCRQSRFQDAVLFFQDTEGKEFQPSVVSFNTIMSRYCKLGF 296

Query: 454 LDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNT 513
           +D A   F  + + GL+P   +Y+I+IHGLC  G + +A D    ME +G  P++VT+N 
Sbjct: 297 VDVAKSFFCMMLKHGLLPDAYSYNILIHGLCIAGSMGEALDLKNDMENHGLEPDMVTYNI 356

Query: 514 LMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVV 552
           L  GF      +    ++ KM     N  P+  T+++++
Sbjct: 357 LAKGFRLLGLINGAWNIIQKMLIKGPN--PNLVTYTVLI 393


>gi|297833654|ref|XP_002884709.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297330549|gb|EFH60968.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 689

 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 156/543 (28%), Positives = 268/543 (49%), Gaps = 26/543 (4%)

Query: 14  ETVSKVKLSSLFKSPRQIAAVSSPETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSP 73
           E    VK+ SLF +  + A V+      N  +  +CK       +AR F  +M      P
Sbjct: 126 EAKQWVKVESLF-AYFETAGVAPNLQTYNVLIKMSCKKK--EFEKARGFLNWMWKEGFKP 182

Query: 74  PISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRI 133
            + S++ +   +AK    D  +  + ++    + PD    NILI+       G   E   
Sbjct: 183 DVFSYSTVINDLAKTGKLDDALELFDEMSERRVAPDVTCYNILID-------GFLKEKDH 235

Query: 134 KEATWLFKNMIA-FGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
           K A  L+  ++    V P+V T+  +I+G  + G +   L++  +M   + E       +
Sbjct: 236 KMAMQLWDKLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWDRMKQNEREK------D 289

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
           +++YS +I  LC EG VDKA+ +F E+  R     VV   T++ GFC  G  +E   L+ 
Sbjct: 290 LYTYSSLIHGLCDEGNVDKAESVFNELVERKAFIDVVTYNTMLGGFCRCGKIKESLELW- 348

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
            +++     N++++N++I  L + GKI+EA  +  LM  +G   D  TY   + G C+ G
Sbjct: 349 RIMEQRNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADNTTYGIFIHGLCVNG 408

Query: 313 RIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYN 372
            ++ A  +   + SKG    V +Y  +I+  CK   +EEA +L +++  +GV       N
Sbjct: 409 YVNKALGVMQEVESKGGHLDVYAYASIIDCLCKKRRLEEASNLVKEMSKHGVELNSHVCN 468

Query: 373 TLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMN 432
            L+ GL +  +   A  L   M      P + +YNILI GLC+     EA      +  N
Sbjct: 469 ALIGGLIRDSRLSDASLLMRGMGKNGCLPTVVSYNILICGLCEAGKFGEASAFVKEMLEN 528

Query: 433 KFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKA 492
             +  ++ ++ L+ GLC+  +++ A EL+H+  Q GL P V+ ++I+IHGLC  GKL+ A
Sbjct: 529 GLKPDLKTYSILLGGLCRDRKIELALELWHQFLQSGLEPDVMMHNILIHGLCSVGKLDDA 588

Query: 493 NDFLLYMEKNGCAPNVVTFNTLMHGFLQ---NNKTSKVVELLHKMAEPERNLVPDDTTFS 549
              +  ME   C  N+VT+NTLM G+ +   +N+ + +   ++KM      L PD  +++
Sbjct: 589 MTVMANMEHRNCTANLVTYNTLMEGYFKVRDSNRATVIWGYMYKMG-----LQPDIISYN 643

Query: 550 IVV 552
            ++
Sbjct: 644 TIL 646



 Score =  195 bits (495), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 133/482 (27%), Positives = 231/482 (47%), Gaps = 17/482 (3%)

Query: 72  SPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVEN 131
            P I S+N L  A  + + +  V S +    + G+ P+  T N+LI       +  C + 
Sbjct: 111 EPGIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLI-------KMSCKKK 163

Query: 132 RIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKT 191
             ++A      M   G +PDV +Y T+IN   +TG L  AL L  +M             
Sbjct: 164 EFEKARGFLNWMWKEGFKPDVFSYSTVINDLAKTGKLDDALELFDEMSERRV------AP 217

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLE-MKGRGINPAVVVCTTLIHGFCCAGNWEEVNGL 250
           ++  Y+I+ID   KE     A +L+ + ++   + P V     +I G    G  ++   +
Sbjct: 218 DVTCYNILIDGFLKEKDHKMAMQLWDKLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKI 277

Query: 251 FIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCL 310
           +  M       +L T++ +I  LC  G +++A  +   +++R    D  TYN+++ G+C 
Sbjct: 278 WDRMKQNEREKDLYTYSSLIHGLCDEGNVDKAESVFNELVERKAFIDVVTYNTMLGGFCR 337

Query: 311 VGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVIT 370
            G+I  + E++  M  +   + +VSYNILI G  +   ++EA  ++R + + G      T
Sbjct: 338 CGKIKESLELWRIMEQRNSVN-IVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADNTT 396

Query: 371 YNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLE 430
           Y   + GL   G    A  +  E++      D+  Y  +ID LCK   ++EA  L   + 
Sbjct: 397 YGIFIHGLCVNGYVNKALGVMQEVESKGGHLDVYAYASIIDCLCKKRRLEEASNLVKEMS 456

Query: 431 MNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLE 490
            +  E    + N LI GL +  RL +A  L   + + G +PTVV+Y+I+I GLC  GK  
Sbjct: 457 KHGVELNSHVCNALIGGLIRDSRLSDASLLMRGMGKNGCLPTVVSYNILICGLCEAGKFG 516

Query: 491 KANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSI 550
           +A+ F+  M +NG  P++ T++ L+ G  ++ K    +EL H+  +    L PD    +I
Sbjct: 517 EASAFVKEMLENGLKPDLKTYSILLGGLCRDRKIELALELWHQFLQS--GLEPDVMMHNI 574

Query: 551 VV 552
           ++
Sbjct: 575 LI 576



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 130/493 (26%), Positives = 233/493 (47%), Gaps = 36/493 (7%)

Query: 56  LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLV-SIGLLPDFLTLN 114
           L++A   F  M+  + +P ++ +N+L     K + +   +  + KL+    + P+  T N
Sbjct: 200 LDDALELFDEMSERRVAPDVTCYNILIDGFLKEKDHKMAMQLWDKLLEDSSVYPNVKTHN 259

Query: 115 ILI----------NCFGNKER------------------GLCVENRIKEATWLFKNMIAF 146
           I+I          +C    +R                  GLC E  + +A  +F  ++  
Sbjct: 260 IMISGLSKCGRVDDCLKIWDRMKQNEREKDLYTYSSLIHGLCDEGNVDKAESVFNELVER 319

Query: 147 GVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKE 206
               DV+TY T++ GFCR G +  +L L + M   +         NI SY+I+I  L + 
Sbjct: 320 KAFIDVVTYNTMLGGFCRCGKIKESLELWRIMEQRN-------SVNIVSYNILIKGLLEN 372

Query: 207 GLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTF 266
           G +D+A  ++  M  +G           IHG C  G   +  G+  E+   G   ++  +
Sbjct: 373 GKIDEATMIWRLMPAKGYAADNTTYGIFIHGLCVNGYVNKALGVMQEVESKGGHLDVYAY 432

Query: 267 NVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHS 326
             +IDCLCK  ++ EA+ L++ M + G+  +    N+L+ G     R+  A  +   M  
Sbjct: 433 ASIIDCLCKKRRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLSDASLLMRGMGK 492

Query: 327 KGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGY 386
            GC  TVVSYNILI G C+     EA +  ++++ NG++  + TY+ LL GL +  +   
Sbjct: 493 NGCLPTVVSYNILICGLCEAGKFGEASAFVKEMLENGLKPDLKTYSILLGGLCRDRKIEL 552

Query: 387 AQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLID 446
           A +L+ +     +EPD+  +NILI GLC    + +A+ +   +E       +  +N L++
Sbjct: 553 ALELWHQFLQSGLEPDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLME 612

Query: 447 GLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAP 506
           G  K    + A  ++  + + GL P +++Y+ ++ GLC   ++  A +F      +G  P
Sbjct: 613 GYFKVRDSNRATVIWGYMYKMGLQPDIISYNTILKGLCLCHRVSYAIEFFDDARNHGIFP 672

Query: 507 NVVTFNTLMHGFL 519
            V T+N L+   +
Sbjct: 673 TVYTWNILVRAVV 685



 Score =  189 bits (479), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 135/469 (28%), Positives = 223/469 (47%), Gaps = 46/469 (9%)

Query: 124 ERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFC-------------------- 163
           +R L V  R++E          FG  P + +Y TL+N F                     
Sbjct: 95  DRALDVFKRMREI---------FGCEPGIRSYNTLLNAFVEAKQWVKVESLFAYFETAGV 145

Query: 164 ----RTGNLSVALRLHKK-------MVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKA 212
               +T N+ + +   KK        ++  ++ G   K ++FSYS +I+ L K G +D A
Sbjct: 146 APNLQTYNVLIKMSCKKKEFEKARGFLNWMWKEGF--KPDVFSYSTVINDLAKTGKLDDA 203

Query: 213 KELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEML-DLGPRPNLLTFNVMID 271
            ELF EM  R + P V     LI GF    + +    L+ ++L D    PN+ T N+MI 
Sbjct: 204 LELFDEMSERRVAPDVTCYNILIDGFLKEKDHKMAMQLWDKLLEDSSVYPNVKTHNIMIS 263

Query: 272 CLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKH 331
            L K G++++   + + M Q     D +TY+SL+ G C  G +D A  +F  +  +    
Sbjct: 264 GLSKCGRVDDCLKIWDRMKQNEREKDLYTYSSLIHGLCDEGNVDKAESVFNELVERKAFI 323

Query: 332 TVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLF 391
            VV+YN ++ G+C+   ++E++ L+R I+       +++YN L+ GL + G+   A  ++
Sbjct: 324 DVVTYNTMLGGFCRCGKIKESLELWR-IMEQRNSVNIVSYNILIKGLLENGKIDEATMIW 382

Query: 392 DEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKA 451
             M       D +TY I I GLC N  V +A+ +   +E       +  +  +ID LCK 
Sbjct: 383 RLMPAKGYAADNTTYGIFIHGLCVNGYVNKALGVMQEVESKGGHLDVYAYASIIDCLCKK 442

Query: 452 GRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTF 511
            RL+ A  L  ++ + G+       + +I GL R  +L  A+  +  M KNGC P VV++
Sbjct: 443 RRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLSDASLLMRGMGKNGCLPTVVSY 502

Query: 512 NTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEK 560
           N L+ G  +  K  +    + +M   E  L PD  T+SI++  L +D K
Sbjct: 503 NILICGLCEAGKFGEASAFVKEML--ENGLKPDLKTYSILLGGLCRDRK 549



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 112/374 (29%), Positives = 192/374 (51%), Gaps = 5/374 (1%)

Query: 199 IIDSLCKEGLVDKAKELFLEMKG-RGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDL 257
           +I +  K  + D+A ++F  M+   G  P +    TL++ F  A  W +V  LF      
Sbjct: 84  VIKTYGKNSMPDRALDVFKRMREIFGCEPGIRSYNTLLNAFVEAKQWVKVESLFAYFETA 143

Query: 258 GPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTA 317
           G  PNL T+NV+I   CK  +  +A G L  M + G  PD F+Y+++++     G++D A
Sbjct: 144 GVAPNLQTYNVLIKMSCKKKEFEKARGFLNWMWKEGFKPDVFSYSTVINDLAKTGKLDDA 203

Query: 318 REIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISN-GVRQTVITYNTLLS 376
            E+F  M  +     V  YNILI+G+ K  + + AM L+ +++ +  V   V T+N ++S
Sbjct: 204 LELFDEMSERRVAPDVTCYNILIDGFLKEKDHKMAMQLWDKLLEDSSVYPNVKTHNIMIS 263

Query: 377 GLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEF 436
           GL + G+     K++D MK    E DL TY+ LI GLC    V +A  +F+ L   K   
Sbjct: 264 GLSKCGRVDDCLKIWDRMKQNEREKDLYTYSSLIHGLCDEGNVDKAESVFNELVERKAFI 323

Query: 437 GIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFL 496
            +  +N ++ G C+ G++  + EL+  + Q+  V  +V+Y+I+I GL   GK+++A    
Sbjct: 324 DVVTYNTMLGGFCRCGKIKESLELWRIMEQRNSV-NIVSYNILIKGLLENGKIDEATMIW 382

Query: 497 LYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLA 556
             M   G A +  T+   +HG   N   +K + ++ ++     +L  D   ++ ++D L 
Sbjct: 383 RLMPAKGYAADNTTYGIFIHGLCVNGYVNKALGVMQEVESKGGHL--DVYAYASIIDCLC 440

Query: 557 KDEKYHECSAVSKS 570
           K  +  E S + K 
Sbjct: 441 KKRRLEEASNLVKE 454


>gi|115458970|ref|NP_001053085.1| Os04g0477200 [Oryza sativa Japonica Group]
 gi|113564656|dbj|BAF14999.1| Os04g0477200, partial [Oryza sativa Japonica Group]
          Length = 528

 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 147/511 (28%), Positives = 246/511 (48%), Gaps = 27/511 (5%)

Query: 53  IINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLT 112
           +++ ++A      + H+  +P  S  NLL  A A  R +   +  Y ++ S+ L     +
Sbjct: 27  VLSADKALSPLAVLPHLDGAPS-SLPNLLLTASAAVRPHATSLRLYSRMKSLSLPISTAS 85

Query: 113 LNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVAL 172
           L+ L++   +             A  LF +M    +     T+  ++   C  G  + AL
Sbjct: 86  LHPLLSALPSAP-----------AFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARAL 134

Query: 173 RLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRG-INPAVVVC 231
            L ++M           + N  +Y+ +I   C  G V  A ++  EM+ RG I P     
Sbjct: 135 ELLRQM----------PRPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTY 184

Query: 232 TTLIHGFCCAGNWEEVNGLFIEMLDLGP-RPNLLTFNVMIDCLCKGGKINEANGLLELMI 290
            T+I G+C  G  +E   +F EML  G  +P  + +N +I   C  GK++ A    + M+
Sbjct: 185 GTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMV 244

Query: 291 QRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVE 350
           +RG+     TYN L+    + GR   A E+   M  KG    V +YNILING+CK  NV+
Sbjct: 245 ERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVK 304

Query: 351 EAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILI 410
           +A+ ++  +   GVR TV+TY  L+  L + GQ     KLFDE     + PDL  YN LI
Sbjct: 305 KALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALI 364

Query: 411 DGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLV 470
           +    +  +  A ++   +E  +       +N L+ GLC  GR+D A +L  ++ ++G+ 
Sbjct: 365 NSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQ 424

Query: 471 PTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVEL 530
           P +VTY+ +I G   KG ++ A      M   G  P ++T+N L+ G  +N +      +
Sbjct: 425 PDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENM 484

Query: 531 LHKMAEPERNLVPDDTTF-SIVVDLLAKDEK 560
           + +M   E  + PDD+T+ S++  L  +DE+
Sbjct: 485 VKEMV--ENGITPDDSTYISLIEGLTTEDER 513


>gi|223635748|sp|Q9LVQ5.2|PP432_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g55840
          Length = 1096

 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 140/524 (26%), Positives = 251/524 (47%), Gaps = 50/524 (9%)

Query: 72  SPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVEN 131
           +P + + N + G+V K+    +V SF ++++   + PD  T NILIN        LC E 
Sbjct: 155 NPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINV-------LCAEG 207

Query: 132 RIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKT 191
             +++++L + M   G  P ++TY T+++ +C+ G    A+ L   M S   +       
Sbjct: 208 SFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVD------A 261

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
           ++ +Y+++I  LC+   + K   L  +M+ R I+P  V   TLI+GF   G     + L 
Sbjct: 262 DVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLL 321

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
            EML  G  PN +TFN +ID     G   EA  +  +M  +GL P   +Y  L+DG C  
Sbjct: 322 NEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKN 381

Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
              D AR  ++ M   G     ++Y  +I+G CK   ++EA+ L  ++  +G+   ++TY
Sbjct: 382 AEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTY 441

Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
           + L++G  + G+   A+++   +    + P+   Y+ LI   C+  C++EA++++  + +
Sbjct: 442 SALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMIL 501

Query: 432 NKFEFGIEIFNCLIDGLCKAGRLDNAWE-------------------------------- 459
                    FN L+  LCKAG++  A E                                
Sbjct: 502 EGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLK 561

Query: 460 ---LFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMH 516
              +F ++ + G  PT  TY  ++ GLC+ G L +A  FL  +     A + V +NTL+ 
Sbjct: 562 AFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLT 621

Query: 517 GFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEK 560
              ++   +K V L  +M   +R+++PD  T++ ++  L +  K
Sbjct: 622 AMCKSGNLAKAVSLFGEMV--QRSILPDSYTYTSLISGLCRKGK 663



 Score =  212 bits (540), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 160/575 (27%), Positives = 262/575 (45%), Gaps = 88/575 (15%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           C  G  +  ++ Y    M     +P I ++N +     K   + A I     + S G+  
Sbjct: 204 CAEG--SFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDA 261

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           D  T N+LI+        LC  NRI +   L ++M    + P+ +TY TLINGF   G +
Sbjct: 262 DVCTYNMLIH-------DLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKV 314

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
            +A +L  +M+S     GL    N  +++ +ID    EG   +A ++F  M+ +G+ P+ 
Sbjct: 315 LIASQLLNEMLS----FGL--SPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSE 368

Query: 229 VVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLEL 288
           V    L+ G C    ++   G ++ M   G     +T+  MID LCK G ++EA  LL  
Sbjct: 369 VSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNE 428

Query: 289 MIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKG---------------CK--- 330
           M + G++PD  TY++L++G+C VGR  TA+EI   ++  G               C+   
Sbjct: 429 MSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGC 488

Query: 331 ---------------HTV--VSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNT 373
                          HT    ++N+L+   CK   V EA    R + S+G+    ++++ 
Sbjct: 489 LKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDC 548

Query: 374 LLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNK 433
           L++G   +G+   A  +FDEM      P   TY  L+ GLCK   ++EA K    L    
Sbjct: 549 LINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVP 608

Query: 434 FEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGK----- 488
                 ++N L+  +CK+G L  A  LF ++ Q+ ++P   TY+ +I GLCRKGK     
Sbjct: 609 AAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAI 668

Query: 489 -------------------------LEKAND------FLLYMEKNGCAPNVVTFNTLMHG 517
                                    + KA        F   M+  G  P++VT N ++ G
Sbjct: 669 LFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDG 728

Query: 518 FLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVV 552
           + +  K  K  +LL +M    +N  P+ TT++I++
Sbjct: 729 YSRMGKIEKTNDLLPEMG--NQNGGPNLTTYNILL 761



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 108/357 (30%), Positives = 185/357 (51%), Gaps = 2/357 (0%)

Query: 196 YSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEML 255
           Y I+I    +EG++  + E+F  M   G NP+V  C  ++     +G    V     EML
Sbjct: 126 YDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEML 185

Query: 256 DLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRID 315
                P++ TFN++I+ LC  G   +++ L++ M + G  P   TYN+++  YC  GR  
Sbjct: 186 KRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFK 245

Query: 316 TAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLL 375
            A E+   M SKG    V +YN+LI+  C+   + +   L R +    +    +TYNTL+
Sbjct: 246 AAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLI 305

Query: 376 SGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFE 435
           +G    G+   A +L +EM  + + P+  T+N LIDG       +EA+K+F+M+E     
Sbjct: 306 NGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLT 365

Query: 436 FGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDF 495
                +  L+DGLCK    D A   + ++ + G+    +TY+ MI GLC+ G L++A   
Sbjct: 366 PSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVL 425

Query: 496 LLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVV 552
           L  M K+G  P++VT++ L++GF +  +     E++ ++      L P+   +S ++
Sbjct: 426 LNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRV--GLSPNGIIYSTLI 480



 Score =  178 bits (452), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 114/424 (26%), Positives = 212/424 (50%), Gaps = 8/424 (1%)

Query: 130 ENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLIS 189
           E  I+++  +F+ M  +G  P V T   ++    ++G         K+M+          
Sbjct: 136 EGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKI------ 189

Query: 190 KTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNG 249
             ++ +++I+I+ LC EG  +K+  L  +M+  G  P +V   T++H +C  G ++    
Sbjct: 190 CPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIE 249

Query: 250 LFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYC 309
           L   M   G   ++ T+N++I  LC+  +I +   LL  M +R ++P+  TYN+L++G+ 
Sbjct: 250 LLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFS 309

Query: 310 LVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVI 369
             G++  A ++   M S G     V++N LI+G+    N +EA+ ++  + + G+  + +
Sbjct: 310 NEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEV 369

Query: 370 TYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHML 429
           +Y  LL GL +  +   A+  +  MK   V     TY  +IDGLCKN  + EAV L + +
Sbjct: 370 SYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEM 429

Query: 430 EMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKL 489
             +  +  I  ++ LI+G CK GR   A E+  ++ + GL P  + YS +I+  CR G L
Sbjct: 430 SKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCL 489

Query: 490 EKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFS 549
           ++A      M   G   +  TFN L+    +  K ++  E +  M      ++P+  +F 
Sbjct: 490 KEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSD--GILPNTVSFD 547

Query: 550 IVVD 553
            +++
Sbjct: 548 CLIN 551



 Score =  171 bits (434), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 130/487 (26%), Positives = 228/487 (46%), Gaps = 24/487 (4%)

Query: 77  SFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEA 136
           +FN+L  ++ K         F R + S G+LP+ ++ + LIN +GN   GL       +A
Sbjct: 510 TFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGL-------KA 562

Query: 137 TWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSY 196
             +F  M   G  P   TYG+L+ G C+ G+L  A +  K +      + + +  +   Y
Sbjct: 563 FSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSL------HAVPAAVDTVMY 616

Query: 197 SIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLD 256
           + ++ ++CK G + KA  LF EM  R I P     T+LI G C  G    +  LF +  +
Sbjct: 617 NTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGK-TVIAILFAKEAE 675

Query: 257 LGPR--PNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRI 314
                 PN + +   +D + K G+        E M   G  PD  T N+++DGY  +G+I
Sbjct: 676 ARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKI 735

Query: 315 DTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTL 374
           +   ++   M ++     + +YNIL++GY K  +V  +  LYR II NG+    +T ++L
Sbjct: 736 EKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSL 795

Query: 375 LSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKF 434
           + G+ ++       K+        VE D  T+N+LI   C N  +  A  L  ++     
Sbjct: 796 VLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGI 855

Query: 435 EFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKAND 494
               +  + ++  L +  R   +  + H++ ++G+ P    Y  +I+GLCR G ++ A  
Sbjct: 856 SLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTA-- 913

Query: 495 FLLYMEKNG---CAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIV 551
           F++  E      C PNV   + ++    +  K  +   LL  M + +  LVP   +F+ +
Sbjct: 914 FVVKEEMIAHKICPPNVAE-SAMVRALAKCGKADEATLLLRFMLKMK--LVPTIASFTTL 970

Query: 552 VDLLAKD 558
           + L  K+
Sbjct: 971 MHLCCKN 977



 Score =  138 bits (348), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 132/542 (24%), Positives = 220/542 (40%), Gaps = 86/542 (15%)

Query: 49   CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
            CK+G   + EA  F   MT     P   SF+ L      +       S + ++  +G  P
Sbjct: 519  CKAG--KVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHP 576

Query: 109  DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
             F T       +G+  +GLC    ++EA    K++ A     D + Y TL+   C++GNL
Sbjct: 577  TFFT-------YGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNL 629

Query: 169  SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRG-INPA 227
            + A+ L  +MV    +  ++  +  ++Y+ +I  LC++G    A     E + RG + P 
Sbjct: 630  AKAVSLFGEMV----QRSILPDS--YTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPN 683

Query: 228  VVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLE 287
             V+ T  + G   AG W+       +M +LG  P+++T N MID   + GKI + N LL 
Sbjct: 684  KVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLP 743

Query: 288  LMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKIL 347
             M  +   P+  TYN L+ GY     + T+  ++ S+   G     ++ + L+ G C+  
Sbjct: 744  EMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESN 803

Query: 348  NVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYA-------------------- 387
             +E  + + +  I  GV     T+N L+S     G+  +A                    
Sbjct: 804  MLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCD 863

Query: 388  ---------------QKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQ------------ 420
                           + +  EM    + P+   Y  LI+GLC+   ++            
Sbjct: 864  AMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAH 923

Query: 421  -----------------------EAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNA 457
                                   EA  L   +   K    I  F  L+   CK G +  A
Sbjct: 924  KICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEA 983

Query: 458  WELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHG 517
             EL   +   GL   +V+Y+++I GLC KG +  A +    M+ +G   N  T+  L+ G
Sbjct: 984  LELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRG 1043

Query: 518  FL 519
             L
Sbjct: 1044 LL 1045



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 115/478 (24%), Positives = 211/478 (44%), Gaps = 21/478 (4%)

Query: 21   LSSLFKSPRQIAAVSSPETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNL 80
            L SL   P  +  V       N  L   CKSG  NL +A   FG M      P   ++  
Sbjct: 601  LKSLHAVPAAVDTV-----MYNTLLTAMCKSG--NLAKAVSLFGEMVQRSILPDSYTYTS 653

Query: 81   LFGAVAKNRHYDAVISFYRKLVSIG-LLPDFLTLNILINCFGNKERGLCVENRIKEATWL 139
            L   + +       I F ++  + G +LP+     ++  CF +   G+    + K   + 
Sbjct: 654  LISGLCRKGKTVIAILFAKEAEARGNVLPN----KVMYTCFVD---GMFKAGQWKAGIYF 706

Query: 140  FKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSII 199
             + M   G  PD++T   +I+G+ R G +     L  +M  G+   G     N+ +Y+I+
Sbjct: 707  REQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEM--GNQNGG----PNLTTYNIL 760

Query: 200  IDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGP 259
            +    K   V  +  L+  +   GI P  + C +L+ G C +   E    +    +  G 
Sbjct: 761  LHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGV 820

Query: 260  RPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTARE 319
              +  TFN++I   C  G+IN A  L+++M   G++ D+ T ++++       R   +R 
Sbjct: 821  EVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRM 880

Query: 320  IFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLF 379
            +   M  +G       Y  LING C++ +++ A  +  ++I++ +    +  + ++  L 
Sbjct: 881  VLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALA 940

Query: 380  QAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIE 439
            + G+A  A  L   M    + P ++++  L+   CKN  V EA++L  ++     +  + 
Sbjct: 941  KCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLV 1000

Query: 440  IFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLL 497
             +N LI GLC  G +  A+EL+ ++   G +    TY  +I GL  +       D +L
Sbjct: 1001 SYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADIIL 1058



 Score =  112 bits (281), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 67/225 (29%), Positives = 114/225 (50%), Gaps = 2/225 (0%)

Query: 329 CKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQ 388
           C      Y+ILI  Y +   +++++ ++R +   G   +V T N +L  + ++G+     
Sbjct: 119 CNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVW 178

Query: 389 KLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGL 448
               EM    + PD++T+NILI+ LC     +++  L   +E + +   I  +N ++   
Sbjct: 179 SFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWY 238

Query: 449 CKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNV 508
           CK GR   A EL   +  KG+   V TY+++IH LCR  ++ K    L  M K    PN 
Sbjct: 239 CKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNE 298

Query: 509 VTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
           VT+NTL++GF    K     +LL++M      L P+  TF+ ++D
Sbjct: 299 VTYNTLINGFSNEGKVLIASQLLNEML--SFGLSPNHVTFNALID 341


>gi|255583247|ref|XP_002532388.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223527912|gb|EEF30000.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 676

 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 140/435 (32%), Positives = 223/435 (51%), Gaps = 42/435 (9%)

Query: 158 LINGFCRTGNLSVALRLHKKMVSGDYENGLISKT----NIFSYSIIIDSLCKEGLVDKAK 213
           ++NG+C+ GNL V   L+  + S      ++ K     N  SY+ +I  LC+ G VD+  
Sbjct: 1   MVNGYCKLGNL-VEANLNNDVNSAFSVFNMMPKKGCRRNEVSYTNLIHGLCEVGRVDEGI 59

Query: 214 ELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCL 273
            +F +M+     P V   T ++H    +G   E   LF EM + G  PN+ T+ VMI+ +
Sbjct: 60  NIFKKMREDDCYPTVRTYTVIVHALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAM 119

Query: 274 CKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTV 333
           CK  K+ E   +L+ M+++GL P   TYN+L+DGYC  G ++ A+EI   MHS  C    
Sbjct: 120 CKETKLEEGRRILDEMVEKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNE 179

Query: 334 VSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDE 393
            +YN LI G+C+  NV  AM+L  +++ + +  +V+TYN+L+ G  + G    A +L + 
Sbjct: 180 RTYNELICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNL 239

Query: 394 MKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGR 453
           M    V PD  TY++ ID LCK   ++EA  LF+ L+    +    I+  LIDG CKAG+
Sbjct: 240 MNENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGK 299

Query: 454 LDNAWELFHK------LP-----------------------------QKGLVPTVVTYSI 478
           +D+A  L  +      LP                             QKGL  TV TY+I
Sbjct: 300 MDDANSLLDRMLTEDCLPNSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTI 359

Query: 479 MIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPE 538
           +I  + ++G  + A+  L  M  +G  P+V  +   +H F       +  +++  M   E
Sbjct: 360 LIVAMLKEGDFDYAHRILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMF--E 417

Query: 539 RNLVPDDTTFSIVVD 553
           R ++PD  T+++V+D
Sbjct: 418 RGVMPDALTYTLVID 432



 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 125/440 (28%), Positives = 212/440 (48%), Gaps = 8/440 (1%)

Query: 120 FGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMV 179
           + N   GLC   R+ E   +FK M      P V TY  +++    +G    A+ L  +M 
Sbjct: 42  YTNLIHGLCEVGRVDEGINIFKKMREDDCYPTVRTYTVIVHALFESGRRMEAINLFSEM- 100

Query: 180 SGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFC 239
               E G   + NI +Y+++I+++CKE  +++ + +  EM  +G+ P+V     LI G+C
Sbjct: 101 ---RERG--CEPNIHTYTVMINAMCKETKLEEGRRILDEMVEKGLVPSVPTYNALIDGYC 155

Query: 240 CAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRF 299
             G  E    +   M      PN  T+N +I   C+   ++ A  LL  M++  L P   
Sbjct: 156 KEGMVEAAQEILDLMHSNSCNPNERTYNELICGFCRKKNVHRAMALLSKMLESRLTPSVV 215

Query: 300 TYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQI 359
           TYNSL+ G C +G +D+A  +   M+  G      +Y++ I+  CK   +EEA  L+  +
Sbjct: 216 TYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSL 275

Query: 360 ISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCV 419
              G++   + Y  L+ G  +AG+   A  L D M   +  P+ STYN LIDGLCK   V
Sbjct: 276 KEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCLPNSSTYNALIDGLCKERKV 335

Query: 420 QEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIM 479
           QEA+ L   +     +  +  +  LI  + K G  D A  +  ++   G  P V  Y+  
Sbjct: 336 QEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAHRILDQMVSSGYQPDVYIYTAF 395

Query: 480 IHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPER 539
           IH  C +G +++A D +  M + G  P+ +T+  ++  +      +   ++L +M +   
Sbjct: 396 IHAFCTRGNIKEAEDMMSMMFERGVMPDALTYTLVIDAYGGLGLLNPAFDVLKRMFDTGC 455

Query: 540 NLVPDDTTFSIVVDLLAKDE 559
           +  P   T+S ++  L K+E
Sbjct: 456 D--PSHHTYSCLIKHLLKEE 473



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 132/452 (29%), Positives = 217/452 (48%), Gaps = 14/452 (3%)

Query: 75  ISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIK 134
           +S  NL+ G     R  D  I+ ++K+      P   T  ++++        L    R  
Sbjct: 40  VSYTNLIHGLCEVGR-VDEGINIFKKMREDDCYPTVRTYTVIVH-------ALFESGRRM 91

Query: 135 EATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIF 194
           EA  LF  M   G  P++ TY  +IN  C+   L    R+  +MV    E GL+   ++ 
Sbjct: 92  EAINLFSEMRERGCEPNIHTYTVMINAMCKETKLEEGRRILDEMV----EKGLVP--SVP 145

Query: 195 SYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEM 254
           +Y+ +ID  CKEG+V+ A+E+   M     NP       LI GFC   N      L  +M
Sbjct: 146 TYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNERTYNELICGFCRKKNVHRAMALLSKM 205

Query: 255 LDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRI 314
           L+    P+++T+N +I   CK G ++ A  LL LM + G+ PD++TY+  +D  C  GRI
Sbjct: 206 LESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFIDTLCKKGRI 265

Query: 315 DTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTL 374
           + A  +F S+  KG K   V Y  LI+GYCK   +++A SL  ++++        TYN L
Sbjct: 266 EEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCLPNSSTYNAL 325

Query: 375 LSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKF 434
           + GL +  +   A  L + M    ++  + TY ILI  + K      A ++   +  + +
Sbjct: 326 IDGLCKERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAHRILDQMVSSGY 385

Query: 435 EFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKAND 494
           +  + I+   I   C  G +  A ++   + ++G++P  +TY+++I      G L  A D
Sbjct: 386 QPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDALTYTLVIDAYGGLGLLNPAFD 445

Query: 495 FLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSK 526
            L  M   GC P+  T++ L+   L+   T K
Sbjct: 446 VLKRMFDTGCDPSHHTYSCLIKHLLKEELTKK 477



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 141/563 (25%), Positives = 241/563 (42%), Gaps = 79/563 (14%)

Query: 38  ETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISF 97
           E      +H  C+ G   ++E    F  M      P + ++ ++  A+ ++      I+ 
Sbjct: 39  EVSYTNLIHGLCEVG--RVDEGINIFKKMREDDCYPTVRTYTVIVHALFESGRRMEAINL 96

Query: 98  YRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGT 157
           + ++   G  P+  T  ++IN        +C E +++E   +   M+  G+ P V TY  
Sbjct: 97  FSEMRERGCEPNIHTYTVMIN-------AMCKETKLEEGRRILDEMVEKGLVPSVPTYNA 149

Query: 158 LINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFL 217
           LI+G+C+ G +  A  +   M S           N  +Y+ +I   C++  V +A  L  
Sbjct: 150 LIDGYCKEGMVEAAQEILDLMHSNS------CNPNERTYNELICGFCRKKNVHRAMALLS 203

Query: 218 EMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGG 277
           +M    + P+VV   +LIHG C  G  +    L   M + G  P+  T++V ID LCK G
Sbjct: 204 KMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFIDTLCKKG 263

Query: 278 KINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYN 337
           +I EAN L   + ++G+  +   Y +L+DGYC  G++D A  +   M ++ C     +YN
Sbjct: 264 RIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCLPNSSTYN 323

Query: 338 ILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEM--- 394
            LI+G CK   V+EA+ L   +I  G++ TV TY  L+  + + G   YA ++ D+M   
Sbjct: 324 ALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAHRILDQMVSS 383

Query: 395 ----KLY----------------------------NVEPDLSTYNILIDGLCKNNCVQEA 422
                +Y                             V PD  TY ++ID       +  A
Sbjct: 384 GYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDALTYTLVIDAYGGLGLLNPA 443

Query: 423 VKLFHMLEMNKFEFGIEIFNCLID--------------GLC---------------KAGR 453
             +   +     +     ++CLI                LC               K  +
Sbjct: 444 FDVLKRMFDTGCDPSHHTYSCLIKHLLKEELTKKYKNVALCDSIPNVFFADVADVWKMMK 503

Query: 454 LDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNT 513
            + A ELF K+ + G  P + TY+ +I GLC+ G+L  A     +M + G +P+   +N+
Sbjct: 504 FETALELFEKMLEHGCSPNINTYAKLIIGLCKVGRLGVAQKLFDHMNERGVSPSEAIYNS 563

Query: 514 LMHGFLQNNKTSKVVELLHKMAE 536
           L++   +       V L+  M E
Sbjct: 564 LLNCCCELGIYGDAVRLVGAMME 586



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 155/593 (26%), Positives = 250/593 (42%), Gaps = 94/593 (15%)

Query: 19  VKLSSLFKSPRQIAAVSSPETQLNEFLHENCKSGI-------------INLNEARYFFGY 65
           V + +LF+S R++ A++      +E     C+  I               L E R     
Sbjct: 79  VIVHALFESGRRMEAIN----LFSEMRERGCEPNIHTYTVMINAMCKETKLEEGRRILDE 134

Query: 66  MTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKER 125
           M      P + ++N L     K    +A       + S    P+  T N LI C      
Sbjct: 135 MVEKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNERTYNELI-C------ 187

Query: 126 GLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYEN 185
           G C +  +  A  L   M+   + P V+TY +LI+G C+ G L  A RL   M     EN
Sbjct: 188 GFCRKKNVHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLM----NEN 243

Query: 186 GLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWE 245
           G++     ++YS+ ID+LCK+G +++A  LF  +K +GI    V+ T LI G+C AG  +
Sbjct: 244 GVVPDQ--WTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMD 301

Query: 246 EVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGL----------- 294
           + N L   ML     PN  T+N +ID LCK  K+ EA  L+E MIQ+GL           
Sbjct: 302 DANSLLDRMLTEDCLPNSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTILI 361

Query: 295 ------------------------NPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCK 330
                                    PD + Y + +  +C  G I  A ++   M  +G  
Sbjct: 362 VAMLKEGDFDYAHRILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVM 421

Query: 331 HTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGL------------ 378
              ++Y ++I+ Y  +  +  A  + +++   G   +  TY+ L+  L            
Sbjct: 422 PDALTYTLVIDAYGGLGLLNPAFDVLKRMFDTGCDPSHHTYSCLIKHLLKEELTKKYKNV 481

Query: 379 ---------FQAGQAGY--------AQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQE 421
                    F A  A          A +LF++M  +   P+++TY  LI GLCK   +  
Sbjct: 482 ALCDSIPNVFFADVADVWKMMKFETALELFEKMLEHGCSPNINTYAKLIIGLCKVGRLGV 541

Query: 422 AVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIH 481
           A KLF  +          I+N L++  C+ G   +A  L   + + G +P + + +++  
Sbjct: 542 AQKLFDHMNERGVSPSEAIYNSLLNCCCELGIYGDAVRLVGAMMEHGHLPLLESLNVLFC 601

Query: 482 GLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKM 534
           GL  +G  EKA      + + G   + V +  L+ G L+N  +    ELL  M
Sbjct: 602 GLYEEGSKEKAKVVFSNLLQCGYNDDEVAWKILIDGLLKNGLSDGCSELLGVM 654



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 108/350 (30%), Positives = 170/350 (48%), Gaps = 2/350 (0%)

Query: 209 VDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNV 268
           V+ A  +F  M  +G     V  T LIHG C  G  +E   +F +M +    P + T+ V
Sbjct: 20  VNSAFSVFNMMPKKGCRRNEVSYTNLIHGLCEVGRVDEGINIFKKMREDDCYPTVRTYTV 79

Query: 269 MIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKG 328
           ++  L + G+  EA  L   M +RG  P+  TY  +++  C   +++  R I   M  KG
Sbjct: 80  IVHALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAMCKETKLEEGRRILDEMVEKG 139

Query: 329 CKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQ 388
              +V +YN LI+GYCK   VE A  +   + SN       TYN L+ G  +      A 
Sbjct: 140 LVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNERTYNELICGFCRKKNVHRAM 199

Query: 389 KLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGL 448
            L  +M    + P + TYN LI G CK   +  A +L +++  N        ++  ID L
Sbjct: 200 ALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFIDTL 259

Query: 449 CKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNV 508
           CK GR++ A  LF+ L +KG+    V Y+ +I G C+ GK++ AN  L  M    C PN 
Sbjct: 260 CKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCLPNS 319

Query: 509 VTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKD 558
            T+N L+ G  +  K  + + L+  M   ++ L     T++I++  + K+
Sbjct: 320 STYNALIDGLCKERKVQEALLLMESMI--QKGLKCTVPTYTILIVAMLKE 367



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 130/510 (25%), Positives = 220/510 (43%), Gaps = 79/510 (15%)

Query: 38  ETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISF 97
           E   NE +   C+    N++ A      M   + +P + ++N L     K  + D+    
Sbjct: 179 ERTYNELICGFCRKK--NVHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRL 236

Query: 98  YRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGT 157
              +   G++PD  T ++ I+        LC + RI+EA  LF ++   G++ + + Y  
Sbjct: 237 LNLMNENGVVPDQWTYSVFIDT-------LCKKGRIEEANVLFNSLKEKGIKANEVIYTA 289

Query: 158 LINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFL 217
           LI+G+C+ G +  A  L  +M++ D         N  +Y+ +ID LCKE  V +A  L  
Sbjct: 290 LIDGYCKAGKMDDANSLLDRMLTED------CLPNSSTYNALIDGLCKERKVQEALLLME 343

Query: 218 EMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGG 277
            M  +G+   V   T LI      G+++  + +  +M+  G +P++  +   I   C  G
Sbjct: 344 SMIQKGLKCTVPTYTILIVAMLKEGDFDYAHRILDQMVSSGYQPDVYIYTAFIHAFCTRG 403

Query: 278 KINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYN 337
            I EA  ++ +M +RG+ PD  TY  ++D Y  +G ++ A ++   M   GC  +  +Y+
Sbjct: 404 NIKEAEDMMSMMFERGVMPDALTYTLVIDAYGGLGLLNPAFDVLKRMFDTGCDPSHHTYS 463

Query: 338 ILIN--------------GYC---------------KILNVEEAMSLYRQIISNGVRQTV 368
            LI                 C               K++  E A+ L+ +++ +G    +
Sbjct: 464 CLIKHLLKEELTKKYKNVALCDSIPNVFFADVADVWKMMKFETALELFEKMLEHGCSPNI 523

Query: 369 ITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLF-H 427
            TY  L+ GL + G+ G AQKLFD M    V P  + YN L++  C+     +AV+L   
Sbjct: 524 NTYAKLIIGLCKVGRLGVAQKLFDHMNERGVSPSEAIYNSLLNCCCELGIYGDAVRLVGA 583

Query: 428 MLEMNK--------------FEFGIE---------IFNC-----------LIDGLCKAGR 453
           M+E                 +E G +         +  C           LIDGL K G 
Sbjct: 584 MMEHGHLPLLESLNVLFCGLYEEGSKEKAKVVFSNLLQCGYNDDEVAWKILIDGLLKNGL 643

Query: 454 LDNAWELFHKLPQKGLVPTVVTYSIMIHGL 483
            D   EL   +  +G      TY ++I GL
Sbjct: 644 SDGCSELLGVMEARGCQIHPQTYRMLIEGL 673



 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 90/356 (25%), Positives = 165/356 (46%), Gaps = 46/356 (12%)

Query: 269 MIDCLCKGGKINEAN---------GLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTARE 319
           M++  CK G + EAN          +  +M ++G   +  +Y +L+ G C VGR+D    
Sbjct: 1   MVNGYCKLGNLVEANLNNDVNSAFSVFNMMPKKGCRRNEVSYTNLIHGLCEVGRVDEGIN 60

Query: 320 IFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLF 379
           IF  M    C  TV +Y ++++   +     EA++L+ ++   G    + TY  +++ + 
Sbjct: 61  IFKKMREDDCYPTVRTYTVIVHALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAMC 120

Query: 380 QAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMN------- 432
           +  +    +++ DEM    + P + TYN LIDG CK   V+ A ++  ++  N       
Sbjct: 121 KETKLEEGRRILDEMVEKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNER 180

Query: 433 ----------------------------KFEFGIEIFNCLIDGLCKAGRLDNAWELFHKL 464
                                       +    +  +N LI G CK G LD+A+ L + +
Sbjct: 181 TYNELICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLM 240

Query: 465 PQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKT 524
            + G+VP   TYS+ I  LC+KG++E+AN     +++ G   N V +  L+ G+ +  K 
Sbjct: 241 NENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKM 300

Query: 525 SKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKSSYRACLYVTI 580
                LL +M     + +P+ +T++ ++D L K+ K  E   + +S  +  L  T+
Sbjct: 301 DDANSLLDRML--TEDCLPNSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTV 354


>gi|38605763|emb|CAE05864.3| OSJNBa0044K18.6 [Oryza sativa Japonica Group]
          Length = 902

 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 147/511 (28%), Positives = 246/511 (48%), Gaps = 27/511 (5%)

Query: 53  IINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLT 112
           +++ ++A      + H+  +P  S  NLL  A A  R +   +  Y ++ S+ L     +
Sbjct: 401 VLSADKALSPLAVLPHLDGAPS-SLPNLLLTASAAVRPHATSLRLYSRMKSLSLPISTAS 459

Query: 113 LNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVAL 172
           L+ L++   +             A  LF +M    +     T+  ++   C  G  + AL
Sbjct: 460 LHPLLSALPSAP-----------AFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARAL 508

Query: 173 RLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRG-INPAVVVC 231
            L ++M           + N  +Y+ +I   C  G V  A ++  EM+ RG I P     
Sbjct: 509 ELLRQM----------PRPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTY 558

Query: 232 TTLIHGFCCAGNWEEVNGLFIEMLDLGP-RPNLLTFNVMIDCLCKGGKINEANGLLELMI 290
            T+I G+C  G  +E   +F EML  G  +P  + +N +I   C  GK++ A    + M+
Sbjct: 559 GTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMV 618

Query: 291 QRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVE 350
           +RG+     TYN L+    + GR   A E+   M  KG    V +YNILING+CK  NV+
Sbjct: 619 ERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVK 678

Query: 351 EAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILI 410
           +A+ ++  +   GVR TV+TY  L+  L + GQ     KLFDE     + PDL  YN LI
Sbjct: 679 KALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALI 738

Query: 411 DGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLV 470
           +    +  +  A ++   +E  +       +N L+ GLC  GR+D A +L  ++ ++G+ 
Sbjct: 739 NSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQ 798

Query: 471 PTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVEL 530
           P +VTY+ +I G   KG ++ A      M   G  P ++T+N L+ G  +N +      +
Sbjct: 799 PDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENM 858

Query: 531 LHKMAEPERNLVPDDTTF-SIVVDLLAKDEK 560
           + +M   E  + PDD+T+ S++  L  +DE+
Sbjct: 859 VKEMV--ENGITPDDSTYISLIEGLTTEDER 887


>gi|357140697|ref|XP_003571900.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Brachypodium distachyon]
          Length = 571

 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 133/424 (31%), Positives = 218/424 (51%), Gaps = 16/424 (3%)

Query: 67  THMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERG 126
            H +  P   S N L  A+      D     ++  +   + PD  T NI+I+       G
Sbjct: 142 AHPRHRPSAFSVNRLLSALVAAERVDLAERAFKAALRRRVSPDLFTFNIVIS-------G 194

Query: 127 LCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFC---RTGNLSVALRLHKKMVSGDY 183
           LC   ++++A  + K++ A+G+ P V+TY T+I+G+C   R G +     L K+MV    
Sbjct: 195 LCKTGQLRKAGDVAKDIRAWGLAPSVVTYNTIIDGYCKRGRAGRMYHVDALLKEMV---- 250

Query: 184 ENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGN 243
           E G+    N  +++++++  CK+     A  +F EMK +GI  +VV  + L+ G C  G 
Sbjct: 251 EAGI--SPNEVTFNVLVNGYCKDSNTAAAVRVFEEMKQQGIAASVVTYSALVWGLCSEGK 308

Query: 244 WEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNS 303
            EE   L  EM DLG  PNL T N +++  CK G + +A G ++ M Q+ + P+  TY  
Sbjct: 309 VEEGVKLVDEMKDLGLVPNLATLNSVLNGFCKKGMMTDAEGWIDSMEQKNVKPNVVTYTI 368

Query: 304 LMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNG 363
           L+DGY  + ++  A  +  +M  KG +     YN LI G+ +  +      L  ++   G
Sbjct: 369 LVDGYRRLDKMKDALAVKEAMSGKGVRPNARIYNCLIAGFTRNGDWRSVSGLLDEMRMKG 428

Query: 364 VRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAV 423
           VR  ++TYN L+  L   G+   A KL DEM +  +EP   TYN +I+G C+   ++ A 
Sbjct: 429 VRADIVTYNVLIGALCVKGEVRKAVKLLDEMLMVGLEPVHLTYNTIINGYCEKGNIKSAY 488

Query: 424 KLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGL 483
           ++   +E  K    +  +N  I  LC+ G+++   EL +++ +KGLVP  VTY  +  G+
Sbjct: 489 EIRTRMEKGKKRANVVTYNVFIKCLCRMGKMEETNELLNEMLEKGLVPNGVTYDTIKEGM 548

Query: 484 CRKG 487
             KG
Sbjct: 549 MEKG 552



 Score =  214 bits (546), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 132/423 (31%), Positives = 216/423 (51%), Gaps = 16/423 (3%)

Query: 108 PDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGN 167
           P   ++N L++        L    R+  A   FK  +   V PD+ T+  +I+G C+TG 
Sbjct: 148 PSAFSVNRLLSA-------LVAAERVDLAERAFKAALRRRVSPDLFTFNIVISGLCKTGQ 200

Query: 168 LSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDK---AKELFLEMKGRGI 224
           L  A  + K + +     GL    ++ +Y+ IID  CK G   +      L  EM   GI
Sbjct: 201 LRKAGDVAKDIRAW----GLAP--SVVTYNTIIDGYCKRGRAGRMYHVDALLKEMVEAGI 254

Query: 225 NPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANG 284
           +P  V    L++G+C   N      +F EM   G   +++T++ ++  LC  GK+ E   
Sbjct: 255 SPNEVTFNVLVNGYCKDSNTAAAVRVFEEMKQQGIAASVVTYSALVWGLCSEGKVEEGVK 314

Query: 285 LLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYC 344
           L++ M   GL P+  T NS+++G+C  G +  A     SM  K  K  VV+Y IL++GY 
Sbjct: 315 LVDEMKDLGLVPNLATLNSVLNGFCKKGMMTDAEGWIDSMEQKNVKPNVVTYTILVDGYR 374

Query: 345 KILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLS 404
           ++  +++A+++   +   GVR     YN L++G  + G       L DEM++  V  D+ 
Sbjct: 375 RLDKMKDALAVKEAMSGKGVRPNARIYNCLIAGFTRNGDWRSVSGLLDEMRMKGVRADIV 434

Query: 405 TYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKL 464
           TYN+LI  LC    V++AVKL   + M   E     +N +I+G C+ G + +A+E+  ++
Sbjct: 435 TYNVLIGALCVKGEVRKAVKLLDEMLMVGLEPVHLTYNTIINGYCEKGNIKSAYEIRTRM 494

Query: 465 PQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKT 524
            +      VVTY++ I  LCR GK+E+ N+ L  M + G  PN VT++T+  G ++   T
Sbjct: 495 EKGKKRANVVTYNVFIKCLCRMGKMEETNELLNEMLEKGLVPNGVTYDTIKEGMMEKGYT 554

Query: 525 SKV 527
             V
Sbjct: 555 PDV 557



 Score = 75.5 bits (184), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 70/317 (22%), Positives = 128/317 (40%), Gaps = 73/317 (23%)

Query: 32  AAVSSPETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHY 91
           A +S  E   N  ++  CK    N   A   F  M     +  + +++ L   +      
Sbjct: 252 AGISPNEVTFNVLVNGYCKDS--NTAAAVRVFEEMKQQGIAASVVTYSALVWGLCSEGKV 309

Query: 92  DAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPD 151
           +  +    ++  +GL+P+  TLN ++N       G C +  + +A     +M    V+P+
Sbjct: 310 EEGVKLVDEMKDLGLVPNLATLNSVLN-------GFCKKGMMTDAEGWIDSMEQKNVKPN 362

Query: 152 VITYGTLINGFCRTGNLSVALRLHKKMV--------------------SGDYEN--GLIS 189
           V+TY  L++G+ R   +  AL + + M                     +GD+ +  GL+ 
Sbjct: 363 VVTYTILVDGYRRLDKMKDALAVKEAMSGKGVRPNARIYNCLIAGFTRNGDWRSVSGLLD 422

Query: 190 -------KTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAG 242
                  + +I +Y+++I +LC +G V KA +L  EM   G+ P  +   T+I+G+C  G
Sbjct: 423 EMRMKGVRADIVTYNVLIGALCVKGEVRKAVKLLDEMLMVGLEPVHLTYNTIINGYCEKG 482

Query: 243 N-----------------------------------WEEVNGLFIEMLDLGPRPNLLTFN 267
           N                                    EE N L  EML+ G  PN +T++
Sbjct: 483 NIKSAYEIRTRMEKGKKRANVVTYNVFIKCLCRMGKMEETNELLNEMLEKGLVPNGVTYD 542

Query: 268 VMIDCLCKGGKINEANG 284
            + + + + G   +  G
Sbjct: 543 TIKEGMMEKGYTPDVRG 559



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 40/120 (33%), Positives = 68/120 (56%), Gaps = 5/120 (4%)

Query: 442 NCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEK 501
           N L+  L  A R+D A   F    ++ + P + T++I+I GLC+ G+L KA D    +  
Sbjct: 154 NRLLSALVAAERVDLAERAFKAALRRRVSPDLFTFNIVISGLCKTGQLRKAGDVAKDIRA 213

Query: 502 NGCAPNVVTFNTLMHGFLQNNKTSK---VVELLHKMAEPERNLVPDDTTFSIVVDLLAKD 558
            G AP+VVT+NT++ G+ +  +  +   V  LL +M E    + P++ TF+++V+   KD
Sbjct: 214 WGLAPSVVTYNTIIDGYCKRGRAGRMYHVDALLKEMVEA--GISPNEVTFNVLVNGYCKD 271


>gi|224109690|ref|XP_002315278.1| predicted protein [Populus trichocarpa]
 gi|222864318|gb|EEF01449.1| predicted protein [Populus trichocarpa]
          Length = 728

 Score =  222 bits (565), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 142/496 (28%), Positives = 245/496 (49%), Gaps = 15/496 (3%)

Query: 41  LNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRK 100
            N  +H +C        EA    G M      P   ++N +   + K    +        
Sbjct: 200 FNILIHGSCMEN--RFGEAIRVLGKMRDYGCPPDNITYNTILDGLCKKGRLNEARDLLLD 257

Query: 101 LVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLIN 160
           + + GL P+  T NIL+        G C    +KEA  + + M    V PD  TY  +I+
Sbjct: 258 MKNKGLFPNRTTFNILV-------VGCCRLGWLKEAANVIELMSQNSVVPDAWTYNVMIS 310

Query: 161 GFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMK 220
           GFC+ G ++ A+RL ++M     EN  +S  ++ +Y+ +I+   + G  ++  +L  EM+
Sbjct: 311 GFCKQGRIAEAMRLREEM-----ENLKLS-PDVVTYNTLINGCFEHGSSEEGFKLIEEME 364

Query: 221 GRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKIN 280
           GRG+ P  V    ++  F   G  +EV+    +M + G  P+++T+N +I   CK GK++
Sbjct: 365 GRGMKPNSVTYNVMVKWFVKKGKMDEVDKTVRKMEESGCLPDIVTYNTLISWHCKVGKMD 424

Query: 281 EANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILI 340
           EA  L++ M ++GL  D  T N+++   C   ++D A ++  S   +G     VSY  LI
Sbjct: 425 EAFRLMDEMGRKGLKMDDVTLNTMLRALCRERKLDEAHDLLCSARRRGYFVDEVSYGTLI 484

Query: 341 NGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVE 400
            GY K     +A+ L+ ++    +  ++ITYN++++GL Q G+   A    DE+    + 
Sbjct: 485 IGYFKHEKASQALRLWDEMKEKEIIPSIITYNSMIAGLCQMGKTNQAIDKLDELLESGLV 544

Query: 401 PDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWEL 460
           PD  TYN +I G C+   V++A +  + +    F+  +   N L+ GLCK G L+ A +L
Sbjct: 545 PDEITYNTIIHGYCQEGQVEKAFQFHNKMVEKNFKPDVVTCNTLLCGLCKEGMLEKALKL 604

Query: 461 FHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQ 520
           F+    KG     V+Y+ +I  LC++ +  +A D L  ME+    P+  T+N ++ G   
Sbjct: 605 FNTWISKGKDVDAVSYNTIILSLCKEKRFGEAFDLLEEMEEKKLGPDCYTYNAILGGLTD 664

Query: 521 NNKTSKVVELLHKMAE 536
             +     E + K+AE
Sbjct: 665 AGRMKDAEEFISKIAE 680



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 129/462 (27%), Positives = 223/462 (48%), Gaps = 40/462 (8%)

Query: 132 RIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKT 191
           R  +A  +F  M   G++P ++T  TL+N   R  + S ++RL K + +   + G+  K 
Sbjct: 139 RPHQAAQIFNRMKRLGMQPTLLTCNTLLNALVRFPS-SHSIRLSKAVFTDFIKIGV--KI 195

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
           N  S++I+I   C E    +A  +  +M+  G  P  +   T++ G C  G   E   L 
Sbjct: 196 NTNSFNILIHGSCMENRFGEAIRVLGKMRDYGCPPDNITYNTILDGLCKKGRLNEARDLL 255

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
           ++M + G  PN  TFN+++   C+ G + EA  ++ELM Q  + PD +TYN ++ G+C  
Sbjct: 256 LDMKNKGLFPNRTTFNILVVGCCRLGWLKEAANVIELMSQNSVVPDAWTYNVMISGFCKQ 315

Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
           GRI  A  +   M +      VV+YN LING  +  + EE   L  ++   G++   +TY
Sbjct: 316 GRIAEAMRLREEMENLKLSPDVVTYNTLINGCFEHGSSEEGFKLIEEMEGRGMKPNSVTY 375

Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
           N ++    + G+     K   +M+     PD+ TYN LI   CK   + EA +L   +  
Sbjct: 376 NVMVKWFVKKGKMDEVDKTVRKMEESGCLPDIVTYNTLISWHCKVGKMDEAFRLMDEMGR 435

Query: 432 NKFEFGIEIFNCLIDGLCKAGRLDNAWE-------------------------------- 459
              +      N ++  LC+  +LD A +                                
Sbjct: 436 KGLKMDDVTLNTMLRALCRERKLDEAHDLLCSARRRGYFVDEVSYGTLIIGYFKHEKASQ 495

Query: 460 ---LFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMH 516
              L+ ++ +K ++P+++TY+ MI GLC+ GK  +A D L  + ++G  P+ +T+NT++H
Sbjct: 496 ALRLWDEMKEKEIIPSIITYNSMIAGLCQMGKTNQAIDKLDELLESGLVPDEITYNTIIH 555

Query: 517 GFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKD 558
           G+ Q  +  K  +  +KM   E+N  PD  T + ++  L K+
Sbjct: 556 GYCQEGQVEKAFQFHNKMV--EKNFKPDVVTCNTLLCGLCKE 595



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 141/494 (28%), Positives = 240/494 (48%), Gaps = 19/494 (3%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
           N  L   CK G   LNEAR     M +    P  ++FN+L     +        +    +
Sbjct: 236 NTILDGLCKKG--RLNEARDLLLDMKNKGLFPNRTTFNILVVGCCRLGWLKEAANVIELM 293

Query: 102 VSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLING 161
               ++PD  T N++I+       G C + RI EA  L + M    + PDV+TY TLING
Sbjct: 294 SQNSVVPDAWTYNVMIS-------GFCKQGRIAEAMRLREEMENLKLSPDVVTYNTLING 346

Query: 162 FCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKG 221
               G+     +L ++M       G   K N  +Y++++    K+G +D+  +   +M+ 
Sbjct: 347 CFEHGSSEEGFKLIEEM------EGRGMKPNSVTYNVMVKWFVKKGKMDEVDKTVRKMEE 400

Query: 222 RGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINE 281
            G  P +V   TLI   C  G  +E   L  EM   G + + +T N M+  LC+  K++E
Sbjct: 401 SGCLPDIVTYNTLISWHCKVGKMDEAFRLMDEMGRKGLKMDDVTLNTMLRALCRERKLDE 460

Query: 282 ANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILIN 341
           A+ LL    +RG   D  +Y +L+ GY    +   A  ++  M  K    ++++YN +I 
Sbjct: 461 AHDLLCSARRRGYFVDEVSYGTLIIGYFKHEKASQALRLWDEMKEKEIIPSIITYNSMIA 520

Query: 342 GYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEP 401
           G C++    +A+    +++ +G+    ITYNT++ G  Q GQ   A +  ++M   N +P
Sbjct: 521 GLCQMGKTNQAIDKLDELLESGLVPDEITYNTIIHGYCQEGQVEKAFQFHNKMVEKNFKP 580

Query: 402 DLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELF 461
           D+ T N L+ GLCK   +++A+KLF+       +     +N +I  LCK  R   A++L 
Sbjct: 581 DVVTCNTLLCGLCKEGMLEKALKLFNTWISKGKDVDAVSYNTIILSLCKEKRFGEAFDLL 640

Query: 462 HKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQN 521
            ++ +K L P   TY+ ++ GL   G+++ A +F+  + + G + N      L  G  Q+
Sbjct: 641 EEMEEKKLGPDCYTYNAILGGLTDAGRMKDAEEFISKIAEKGKSEN----QFLELGKRQD 696

Query: 522 NKTSKVVELLHKMA 535
            +TS++ +  H  A
Sbjct: 697 ARTSEIPQEPHPNA 710



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 60/248 (24%), Positives = 108/248 (43%), Gaps = 36/248 (14%)

Query: 57  NEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNIL 116
           ++A   +  M   +  P I ++N +   + +    +  I    +L+  GL+PD +T N +
Sbjct: 494 SQALRLWDEMKEKEIIPSIITYNSMIAGLCQMGKTNQAIDKLDELLESGLVPDEITYNTI 553

Query: 117 INCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHK 176
           I+       G C E ++++A      M+    +PDV+T  TL+ G C+ G L  AL+L  
Sbjct: 554 IH-------GYCQEGQVEKAFQFHNKMVEKNFKPDVVTCNTLLCGLCKEGMLEKALKLFN 606

Query: 177 KMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIH 236
             +S   +       +  SY+ II SLCKE    +A +L  EM+ + + P       ++ 
Sbjct: 607 TWISKGKD------VDAVSYNTIILSLCKEKRFGEAFDLLEEMEEKKLGPDCYTYNAILG 660

Query: 237 GFCCAGNWEEVNGLFIEM----------LDLG-------------PRPNLLTFNVMIDCL 273
           G   AG  ++      ++          L+LG             P PN + ++  I+ L
Sbjct: 661 GLTDAGRMKDAEEFISKIAEKGKSENQFLELGKRQDARTSEIPQEPHPNAIAYSNKINEL 720

Query: 274 CKGGKINE 281
           C  G+  +
Sbjct: 721 CSQGRYKD 728


>gi|302774757|ref|XP_002970795.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
 gi|302806735|ref|XP_002985099.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
 gi|300147309|gb|EFJ13974.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
 gi|300161506|gb|EFJ28121.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
          Length = 543

 Score =  221 bits (564), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 154/497 (30%), Positives = 239/497 (48%), Gaps = 33/497 (6%)

Query: 53  IINLNEARYFFGYMTHMQPSPPI-SSFN---LLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           I +++ + +FF ++T       I ++F    LL   V   RH+ A   F  +L+      
Sbjct: 44  IKDVDVSLFFFRWVTRSHRGESIHNNFTCNCLLRTLVKARRHHQAYQIFRDELLGQHCDT 103

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           + +T N LI        G C    ++ A  L   M   G  PDV+T+ +++   C TGNL
Sbjct: 104 NHITYNTLIG-------GFCKAGDMERAFQLLAEMKERGHSPDVVTHSSIVQALCNTGNL 156

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
           S A++  ++ V    ++ L        ++I++  LCK   + +A+++  EM  RGI P V
Sbjct: 157 SRAMQYFRESVECAPDSVL--------FNILVHGLCKANQLSEARQMIEEMSERGIVPDV 208

Query: 229 VVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLEL 288
           V   +LI G C +   EE   L   M+    RPNL+T+N +I   CK G    A+ L+E 
Sbjct: 209 VTYNSLIDGLCKSYRMEEARQLLETMVKRKVRPNLVTYNTLIYGYCKTGCTGLAHQLIER 268

Query: 289 MIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILN 348
           MIQ G +PD  T+NSL+ G+C   +ID A E+   M    C   +V+YN+LI+G C    
Sbjct: 269 MIQSGTHPDVVTFNSLISGFCQKSKIDKACEVLHLMKKGLCAPNLVTYNVLISGLCDAGR 328

Query: 349 VEEAMSLYRQIISNGVRQTVITYNTLLSGL---FQAGQAGYAQKLFDEMKLYNVEPDLST 405
             EA  L  ++   G+   +ITYN+L+      FQ  QA   Q L  E     V PD  +
Sbjct: 329 ANEACELLSEMDGRGILPDIITYNSLIGIFCRNFQIEQAFQIQNLMVER---GVIPDGIS 385

Query: 406 YNILIDGLCKNNCVQEAVKLFHMLEMNKFEFG----IEIFNCLIDGLCKAGRLDNAWELF 461
           Y  L   L K+    EA  L      N F+ G    +  FN L++GLC + RLD A  L 
Sbjct: 386 YCTLAVALLKSERFDEAFALLD----NMFDAGAIPNLFTFNSLMEGLCCSRRLDEARHLL 441

Query: 462 HKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQN 521
             + + G  P   TY +++ GLC+ G+++ A + L+ M   G  P V +  T++H   + 
Sbjct: 442 AVMRRVGCDPAASTYEVLVTGLCKAGRVDDAKEVLVMMVSEGIQPLVSSSGTIVHTLARE 501

Query: 522 NKTSKVVELLHKMAEPE 538
            K    +    ++   E
Sbjct: 502 GKQDLALHYFDQVVAAE 518



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 116/377 (30%), Positives = 198/377 (52%), Gaps = 4/377 (1%)

Query: 191 TNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGL 250
           TN  +Y+ +I   CK G +++A +L  EMK RG +P VV  ++++   C  GN       
Sbjct: 103 TNHITYNTLIGGFCKAGDMERAFQLLAEMKERGHSPDVVTHSSIVQALCNTGNLSRAMQY 162

Query: 251 FIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCL 310
           F E ++  P   L  FN+++  LCK  +++EA  ++E M +RG+ PD  TYNSL+DG C 
Sbjct: 163 FRESVECAPDSVL--FNILVHGLCKANQLSEARQMIEEMSERGIVPDVVTYNSLIDGLCK 220

Query: 311 VGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVIT 370
             R++ AR++  +M  +  +  +V+YN LI GYCK      A  L  ++I +G    V+T
Sbjct: 221 SYRMEEARQLLETMVKRKVRPNLVTYNTLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVT 280

Query: 371 YNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLE 430
           +N+L+SG  Q  +   A ++   MK     P+L TYN+LI GLC      EA +L   ++
Sbjct: 281 FNSLISGFCQKSKIDKACEVLHLMKKGLCAPNLVTYNVLISGLCDAGRANEACELLSEMD 340

Query: 431 MNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLE 490
                  I  +N LI   C+  +++ A+++ + + ++G++P  ++Y  +   L +  + +
Sbjct: 341 GRGILPDIITYNSLIGIFCRNFQIEQAFQIQNLMVERGVIPDGISYCTLAVALLKSERFD 400

Query: 491 KANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSI 550
           +A   L  M   G  PN+ TFN+LM G   + +  +   LL  M     +  P  +T+ +
Sbjct: 401 EAFALLDNMFDAGAIPNLFTFNSLMEGLCCSRRLDEARHLLAVMRRVGCD--PAASTYEV 458

Query: 551 VVDLLAKDEKYHECSAV 567
           +V  L K  +  +   V
Sbjct: 459 LVTGLCKAGRVDDAKEV 475



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 108/391 (27%), Positives = 176/391 (45%), Gaps = 75/391 (19%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           C +G  NL+ A  +F       P   +  FN+L   + K            ++   G++P
Sbjct: 151 CNTG--NLSRAMQYFRESVECAPDSVL--FNILVHGLCKANQLSEARQMIEEMSERGIVP 206

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           D +T N LI+       GLC   R++EA  L + M+   VRP+++TY TLI G+C+TG  
Sbjct: 207 DVVTYNSLID-------GLCKSYRMEEARQLLETMVKRKVRPNLVTYNTLIYGYCKTGCT 259

Query: 169 SVALRLHKKMV-SGDYE-----NGLIS-----------------------KTNIFSYSII 199
            +A +L ++M+ SG +      N LIS                         N+ +Y+++
Sbjct: 260 GLAHQLIERMIQSGTHPDVVTFNSLISGFCQKSKIDKACEVLHLMKKGLCAPNLVTYNVL 319

Query: 200 IDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFC-------------------- 239
           I  LC  G  ++A EL  EM GRGI P ++   +LI  FC                    
Sbjct: 320 ISGLCDAGRANEACELLSEMDGRGILPDIITYNSLIGIFCRNFQIEQAFQIQNLMVERGV 379

Query: 240 -------C--------AGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANG 284
                  C        +  ++E   L   M D G  PNL TFN +++ LC   +++EA  
Sbjct: 380 IPDGISYCTLAVALLKSERFDEAFALLDNMFDAGAIPNLFTFNSLMEGLCCSRRLDEARH 439

Query: 285 LLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYC 344
           LL +M + G +P   TY  L+ G C  GR+D A+E+ + M S+G +  V S   +++   
Sbjct: 440 LLAVMRRVGCDPAASTYEVLVTGLCKAGRVDDAKEVLVMMVSEGIQPLVSSSGTIVHTLA 499

Query: 345 KILNVEEAMSLYRQIISNGVRQTVITYNTLL 375
           +    + A+  + Q+++   +    +Y  LL
Sbjct: 500 REGKQDLALHYFDQVVAAESKACDPSYQKLL 530


>gi|242070015|ref|XP_002450284.1| hypothetical protein SORBIDRAFT_05g003220 [Sorghum bicolor]
 gi|241936127|gb|EES09272.1| hypothetical protein SORBIDRAFT_05g003220 [Sorghum bicolor]
          Length = 727

 Score =  221 bits (564), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 151/528 (28%), Positives = 245/528 (46%), Gaps = 53/528 (10%)

Query: 72  SPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVEN 131
           +P +   N +   +     +D V + YR+++ + + P  +T N L++ F         E 
Sbjct: 205 APDVRDCNCVLRVLRDAARWDDVRAVYREMLQLEIEPTIVTYNTLLDSFLK-------EG 257

Query: 132 RIKEATWLFKNM--IAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLIS 189
           R  EA+ L K M     G   + +TY  +I+   R G+L  A +L   M        L  
Sbjct: 258 RKDEASMLLKEMETQGGGCLLNDVTYNVVISFLAREGHLENAAKLVDSM-------RLSK 310

Query: 190 KTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNG 249
           K + F+Y+ +I +L + G V K + L +EM+  GI P +V    +IHG   +   E    
Sbjct: 311 KASSFTYNPLITALLERGFVQKVEALQMEMENEGIMPTLVTYNAIIHGLLKSEQVEAAQL 370

Query: 250 LFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYC 309
            F EM  +G  P+L+T+N M++  CK G + EA  LL  + + GL P   TYN+L+DGYC
Sbjct: 371 KFAEMRAMGLLPDLITYNSMLNGYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYC 430

Query: 310 LVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVI 369
            +G ++ AR +   M  +GC   V +Y IL+NG  K+ N+  A   + +++S G++    
Sbjct: 431 RLGGLEEARRLKEEMVEQGCFPDVCTYTILMNGSHKVRNLPMAREFFDEMLSKGLQPDCF 490

Query: 370 TYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKN------------- 416
            YNT +      G    A +L + M L  + PD  TYN++IDGLCK              
Sbjct: 491 AYNTRICAELILGDTHKAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKDLKMKM 550

Query: 417 -------NCV---------------QEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRL 454
                  +C+                EA KL + +  +  +  +  +  LI   C+ G L
Sbjct: 551 VSDGLQPDCITYTCLIHAHCERGLLSEARKLLNGMVSDGLQPSVVTYTILIHTCCRRGNL 610

Query: 455 DNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTL 514
            +A+  F K+   G+ P  +TY+++IH LCR G+   A      M + G APN  T+  L
Sbjct: 611 YSAYGWFRKMLDVGIEPNEITYNVLIHALCRTGRTLLAYHHFHEMLERGLAPNKYTYTLL 670

Query: 515 MHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYH 562
           + G  +    +  + L  +M   +  + PD  T + +     K   YH
Sbjct: 671 IDGNCREGNWADAIRLYFEMH--QNGIPPDYCTHNALFKGFDKGHMYH 716



 Score =  159 bits (401), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 112/365 (30%), Positives = 169/365 (46%), Gaps = 41/365 (11%)

Query: 10  LFSSETVSKVKLSSLFKSPRQIAAVSSPETQLNEFLHENCKSGIINLNEARYFFGYMTHM 69
           L  SE V   +L   F   R +  +    T  N  L+  CK+G  NL EA +  G +   
Sbjct: 359 LLKSEQVEAAQLK--FAEMRAMGLLPDLIT-YNSMLNGYCKAG--NLKEALWLLGDLRRA 413

Query: 70  QPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILIN----------- 118
             +P + ++N L     +    +       ++V  G  PD  T  IL+N           
Sbjct: 414 GLAPTVLTYNTLIDGYCRLGGLEEARRLKEEMVEQGCFPDVCTYTILMNGSHKVRNLPMA 473

Query: 119 ---------------CFGNKERGLCVE---NRIKEATWLFKNMIAFGVRPDVITYGTLIN 160
                          CF    R +C E       +A  L + M+  G+ PD +TY  +I+
Sbjct: 474 REFFDEMLSKGLQPDCFAYNTR-ICAELILGDTHKAFQLREVMMLKGIYPDTVTYNVIID 532

Query: 161 GFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMK 220
           G C+TGNL  A  L  KMVS    +GL  + +  +Y+ +I + C+ GL+ +A++L   M 
Sbjct: 533 GLCKTGNLKDAKDLKMKMVS----DGL--QPDCITYTCLIHAHCERGLLSEARKLLNGMV 586

Query: 221 GRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKIN 280
             G+ P+VV  T LIH  C  GN     G F +MLD+G  PN +T+NV+I  LC+ G+  
Sbjct: 587 SDGLQPSVVTYTILIHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIHALCRTGRTL 646

Query: 281 EANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILI 340
            A      M++RGL P+++TY  L+DG C  G    A  ++  MH  G      ++N L 
Sbjct: 647 LAYHHFHEMLERGLAPNKYTYTLLIDGNCREGNWADAIRLYFEMHQNGIPPDYCTHNALF 706

Query: 341 NGYCK 345
            G+ K
Sbjct: 707 KGFDK 711



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 103/340 (30%), Positives = 175/340 (51%), Gaps = 11/340 (3%)

Query: 223 GINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEA 282
           G+ P V  C  ++     A  W++V  ++ EML L   P ++T+N ++D   K G+ +EA
Sbjct: 203 GVAPDVRDCNCVLRVLRDAARWDDVRAVYREMLQLEIEPTIVTYNTLLDSFLKEGRKDEA 262

Query: 283 NGLLELMIQRG----LNPDRFTYNSLMDGYCLVGRIDTAREIFLSMH-SKGCKHTVVSYN 337
           + LL+ M  +G    LN    TYN ++      G ++ A ++  SM  SK  K +  +YN
Sbjct: 263 SMLLKEMETQGGGCLLND--VTYNVVISFLAREGHLENAAKLVDSMRLSK--KASSFTYN 318

Query: 338 ILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLY 397
            LI    +   V++  +L  ++ + G+  T++TYN ++ GL ++ Q   AQ  F EM+  
Sbjct: 319 PLITALLERGFVQKVEALQMEMENEGIMPTLVTYNAIIHGLLKSEQVEAAQLKFAEMRAM 378

Query: 398 NVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNA 457
            + PDL TYN +++G CK   ++EA+ L   L        +  +N LIDG C+ G L+ A
Sbjct: 379 GLLPDLITYNSMLNGYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGGLEEA 438

Query: 458 WELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHG 517
             L  ++ ++G  P V TY+I+++G  +   L  A +F   M   G  P+   +NT +  
Sbjct: 439 RRLKEEMVEQGCFPDVCTYTILMNGSHKVRNLPMAREFFDEMLSKGLQPDCFAYNTRICA 498

Query: 518 FLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAK 557
            L    T K  +L   M    + + PD  T+++++D L K
Sbjct: 499 ELILGDTHKAFQLREVMM--LKGIYPDTVTYNVIIDGLCK 536



 Score = 72.4 bits (176), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 64/239 (26%), Positives = 109/239 (45%), Gaps = 11/239 (4%)

Query: 353 MSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDG 412
           ++ +R +  +GV   V   N +L  L  A +    + ++ EM    +EP + TYN L+D 
Sbjct: 193 LAAFRVVACHGVAPDVRDCNCVLRVLRDAARWDDVRAVYREMLQLEIEPTIVTYNTLLDS 252

Query: 413 LCKNNCVQEAVKLFHMLEMNKFEFGIE--IFNCLIDGLCKAGRLDNAWELFH--KLPQKG 468
             K     EA  L   +E       +    +N +I  L + G L+NA +L    +L +K 
Sbjct: 253 FLKEGRKDEASMLLKEMETQGGGCLLNDVTYNVVISFLAREGHLENAAKLVDSMRLSKKA 312

Query: 469 LVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVV 528
              +  TY+ +I  L  +G ++K     + ME  G  P +VT+N ++HG L   K+ +V 
Sbjct: 313 ---SSFTYNPLITALLERGFVQKVEALQMEMENEGIMPTLVTYNAIIHGLL---KSEQVE 366

Query: 529 ELLHKMAEPER-NLVPDDTTFSIVVDLLAKDEKYHECSAVSKSSYRACLYVTIFQPSSL 586
               K AE     L+PD  T++ +++   K     E   +     RA L  T+   ++L
Sbjct: 367 AAQLKFAEMRAMGLLPDLITYNSMLNGYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTL 425


>gi|358346655|ref|XP_003637381.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503316|gb|AES84519.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1023

 Score =  221 bits (564), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 140/498 (28%), Positives = 248/498 (49%), Gaps = 36/498 (7%)

Query: 75  ISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIK 134
           +S F  L      +  +    + +  + ++GL+P     N L+  F     GL     + 
Sbjct: 59  VSFFCTLIRLYLTHDRFSTASATFSHMRALGLVPTLPFWNTLLYQFN--ASGL-----VS 111

Query: 135 EATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIF 194
           +   ++ +M+  GV PDV +   L++  C+ G+L +AL        G   N  +   +  
Sbjct: 112 QVKLMYSDMLFCGVVPDVFSVNVLVHSLCKVGDLDLAL--------GYLRNNDVVDIDNV 163

Query: 195 SYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEM 254
           +Y+ +I   C++GLVD+   L  EM  RG+    + C  L+ G+C  G  +    +   +
Sbjct: 164 TYNTVIWGFCQKGLVDQGFGLLSEMVKRGLCFDSITCNILVKGYCRIGLVQYAEWVMYNL 223

Query: 255 LDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRI 314
           +D G   +++  N +ID  C+ G +++A  L+E   +  +  D  TYN+L+  +C  G +
Sbjct: 224 VDGGVTKDVIGLNTLIDGYCEAGLMSQATELIENSWRSDVKIDIVTYNTLLKAFCKTGDL 283

Query: 315 DTAREIFLSM-------------------HSKGCKHTVVSYNILINGYCKILNVEEAMSL 355
             A  +F  +                     K  + T+V+Y  LI  YCK + VEE+ SL
Sbjct: 284 TRAESLFNEILGFWKDEDRLKNNDVVTQNEIKNLQPTLVTYTTLIAAYCKFVGVEESHSL 343

Query: 356 YRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCK 415
           Y+++I NG+   V+T +++L G  + G+   A  LF EM    ++P+  +Y  +I+ L K
Sbjct: 344 YKKMIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFK 403

Query: 416 NNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVT 475
           +  V EA  L   + +    F I     ++DGL K G+   A E+F  + +  L P  VT
Sbjct: 404 SGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVT 463

Query: 476 YSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMA 535
           YS ++ G C+ GK+E A   L  MEK    PNV+TF+++++G+ +    SK V++L +M 
Sbjct: 464 YSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMV 523

Query: 536 EPERNLVPDDTTFSIVVD 553
             +RN++P+   ++I++D
Sbjct: 524 --QRNVMPNTIVYAILID 539



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 138/473 (29%), Positives = 241/473 (50%), Gaps = 37/473 (7%)

Query: 101 LVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLIN 160
           LV  G+  D + LN LI+       G C    + +AT L +N     V+ D++TY TL+ 
Sbjct: 223 LVDGGVTKDVIGLNTLID-------GYCEAGLMSQATELIENSWRSDVKIDIVTYNTLLK 275

Query: 161 GFCRTGNLSVALRLHKKMVSGDYE-------NGLISKTNI-------FSYSIIIDSLCKE 206
            FC+TG+L+ A  L  +++ G ++       N ++++  I        +Y+ +I + CK 
Sbjct: 276 AFCKTGDLTRAESLFNEIL-GFWKDEDRLKNNDVVTQNEIKNLQPTLVTYTTLIAAYCKF 334

Query: 207 GLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTF 266
             V+++  L+ +M   GI P VV C+++++GFC  G   E   LF EM ++G  PN +++
Sbjct: 335 VGVEESHSLYKKMIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSY 394

Query: 267 NVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHS 326
             +I+ L K G++ EA  L   M+ RG++ D  T  ++MDG   VG+   A E+F ++  
Sbjct: 395 ATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILK 454

Query: 327 KGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGY 386
                  V+Y+ L++GYCK+  +E A  + +++    V   VIT++++++G  + G    
Sbjct: 455 LNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSK 514

Query: 387 AQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLID 446
           A  +  EM   NV P+   Y ILIDG  K      A      ++  + E    IF+ L++
Sbjct: 515 AVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLN 574

Query: 447 GLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAP 506
            L + GR+D A  L   +  KG+ P +V Y+ +I G  ++G    A   +  M++     
Sbjct: 575 NLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNIRF 634

Query: 507 NVVTFNTLMHGFLQNNKT------SKVVELLHKMAEPERNLVPDDTTFSIVVD 553
           +VV +N L+ G L+  K       S+++EL          L PD  T++ +++
Sbjct: 635 DVVAYNALIKGLLRLGKYDPRYVCSRMIEL---------GLAPDCITYNTIIN 678



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 126/464 (27%), Positives = 231/464 (49%), Gaps = 14/464 (3%)

Query: 72  SPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVEN 131
            P + ++  L  A  K    +   S Y+K++  G++PD +T + ++        G C   
Sbjct: 318 QPTLVTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSIL-------YGFCRHG 370

Query: 132 RIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKT 191
           ++ EA  LF+ M   G+ P+ ++Y T+IN   ++G +  A  L  +MV      G+    
Sbjct: 371 KLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVV----RGI--SF 424

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
           +I + + ++D L K G   +A+E+F  +    + P  V  + L+ G+C  G  E    + 
Sbjct: 425 DIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVL 484

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
            +M      PN++TF+ +I+   K G +++A  +L  M+QR + P+   Y  L+DGY   
Sbjct: 485 QKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKA 544

Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
           G  D A +    M S+  + + V ++IL+N   ++  ++EA SL   + S G+   ++ Y
Sbjct: 545 GEQDVADDFCKEMKSRRLEESNVIFDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNY 604

Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
            +L+ G F+ G    A  +  EMK  N+  D+  YN LI GL +            M+E+
Sbjct: 605 ASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGLLRLGKYDPRYVCSRMIEL 664

Query: 432 NKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEK 491
                 I  +N +I+  C  G+ ++A ++ +++   G++P  VTY+I+I GLC+ G +EK
Sbjct: 665 GLAPDCIT-YNTIINTYCIKGKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTGAVEK 723

Query: 492 ANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMA 535
           A   L  M      P  +T   L+  + ++ K  K++++  K+ 
Sbjct: 724 AESALDEMLVMEFVPTPITHKFLVKAYSRSEKADKILQIHEKLV 767



 Score =  188 bits (477), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 138/533 (25%), Positives = 253/533 (47%), Gaps = 55/533 (10%)

Query: 58  EARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILI 117
           EA   F  +  +  +P   +++ L     K    +      +K+    + P+ +T + +I
Sbjct: 444 EAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSII 503

Query: 118 NCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKK 177
           N +  K         + +A  + + M+   V P+ I Y  LI+G+ + G   VA    K+
Sbjct: 504 NGYAKK-------GMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKE 556

Query: 178 MVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHG 237
           M S   E     ++N+  + I++++L + G +D+A+ L ++M  +GI+P +V   +LI G
Sbjct: 557 MKSRRLE-----ESNVI-FDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDG 610

Query: 238 FCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPD 297
           +   GN      +  EM +   R +++ +N +I  L + GK  +   +   MI+ GL PD
Sbjct: 611 YFKEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGLLRLGKY-DPRYVCSRMIELGLAPD 669

Query: 298 RFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMS--- 354
             TYN++++ YC+ G+ + A +I   M S G     V+YNILI G CK   VE+A S   
Sbjct: 670 CITYNTIINTYCIKGKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTGAVEKAESALD 729

Query: 355 --------------------------------LYRQIISNGVRQTVITYNTLLSGLFQAG 382
                                           ++ +++++G+  ++  YNTL++   + G
Sbjct: 730 EMLVMEFVPTPITHKFLVKAYSRSEKADKILQIHEKLVASGLELSLTVYNTLITVFCRLG 789

Query: 383 QAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFN 442
               A+ + DEM    +  DL TYN LI G C  + V++A+K +  + ++     I  +N
Sbjct: 790 MTRKAKVVLDEMVKRGISADLVTYNALIRGYCTGSHVEKALKTYSQMFVDGIAPNITTYN 849

Query: 443 CLIDGLCKAG----RLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLY 498
            L+ GL  AG     ++   +L  ++ ++GLVP   TY I++ G  R G  +K     + 
Sbjct: 850 TLLGGLSNAGLMEEMMEETEKLVSEMNERGLVPNAATYDILVSGYGRVGNRKKTIILHIE 909

Query: 499 MEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIV 551
           M   G  P + T+N L+  + ++ K  +  ELL+ +    R  +P+  T+ I+
Sbjct: 910 MITKGFVPTLKTYNVLISDYAKSGKMIEARELLNDLLTKGR--IPNSFTYDIL 960



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 84/342 (24%), Positives = 169/342 (49%), Gaps = 18/342 (5%)

Query: 75  ISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIK 134
           + ++N L   + +   YD      R ++ +GL PD +T N +IN +       C++ + +
Sbjct: 636 VVAYNALIKGLLRLGKYDPRYVCSR-MIELGLAPDCITYNTIINTY-------CIKGKTE 687

Query: 135 EATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIF 194
           +A  +   M ++G+ P+ +TY  LI G C+TG +  A     +M+  ++    I+     
Sbjct: 688 DALDILNEMKSYGIMPNAVTYNILIGGLCKTGAVEKAESALDEMLVMEFVPTPIT----- 742

Query: 195 SYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEM 254
            +  ++ +  +    DK  ++  ++   G+  ++ V  TLI  FC  G   +   +  EM
Sbjct: 743 -HKFLVKAYSRSEKADKILQIHEKLVASGLELSLTVYNTLITVFCRLGMTRKAKVVLDEM 801

Query: 255 LDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG-- 312
           +  G   +L+T+N +I   C G  + +A      M   G+ P+  TYN+L+ G    G  
Sbjct: 802 VKRGISADLVTYNALIRGYCTGSHVEKALKTYSQMFVDGIAPNITTYNTLLGGLSNAGLM 861

Query: 313 --RIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVIT 370
              ++   ++   M+ +G      +Y+IL++GY ++ N ++ + L+ ++I+ G   T+ T
Sbjct: 862 EEMMEETEKLVSEMNERGLVPNAATYDILVSGYGRVGNRKKTIILHIEMITKGFVPTLKT 921

Query: 371 YNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDG 412
           YN L+S   ++G+   A++L +++      P+  TY+IL  G
Sbjct: 922 YNVLISDYAKSGKMIEARELLNDLLTKGRIPNSFTYDILTCG 963



 Score =  122 bits (306), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 96/369 (26%), Positives = 164/369 (44%), Gaps = 33/369 (8%)

Query: 25  FKSPRQIAAVSSPETQLNEFLHENCKSGIINLN------------EARYFFGYMTHMQPS 72
           FK   Q+AA+S     + E   +N +  ++  N            + RY    M  +  +
Sbjct: 612 FKEGNQLAALSI----VQEMKEKNIRFDVVAYNALIKGLLRLGKYDPRYVCSRMIELGLA 667

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
           P   ++N +          +  +    ++ S G++P+ +T NILI        GLC    
Sbjct: 668 PDCITYNTIINTYCIKGKTEDALDILNEMKSYGIMPNAVTYNILIG-------GLCKTGA 720

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
           +++A      M+     P  IT+  L+  + R+      L++H+K+V+   E  L     
Sbjct: 721 VEKAESALDEMLVMEFVPTPITHKFLVKAYSRSEKADKILQIHEKLVASGLELSLTV--- 777

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
              Y+ +I   C+ G+  KAK +  EM  RGI+  +V    LI G+C   + E+    + 
Sbjct: 778 ---YNTLITVFCRLGMTRKAKVVLDEMVKRGISADLVTYNALIRGYCTGSHVEKALKTYS 834

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGG----KINEANGLLELMIQRGLNPDRFTYNSLMDGY 308
           +M   G  PN+ T+N ++  L   G     + E   L+  M +RGL P+  TY+ L+ GY
Sbjct: 835 QMFVDGIAPNITTYNTLLGGLSNAGLMEEMMEETEKLVSEMNERGLVPNAATYDILVSGY 894

Query: 309 CLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTV 368
             VG       + + M +KG   T+ +YN+LI+ Y K   + EA  L   +++ G     
Sbjct: 895 GRVGNRKKTIILHIEMITKGFVPTLKTYNVLISDYAKSGKMIEARELLNDLLTKGRIPNS 954

Query: 369 ITYNTLLSG 377
            TY+ L  G
Sbjct: 955 FTYDILTCG 963



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 75/264 (28%), Positives = 126/264 (47%), Gaps = 19/264 (7%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CK+G +   E+      +    P+P    F  L  A +++   D ++  + KLV+ GL  
Sbjct: 716 CKTGAVEKAESALDEMLVMEFVPTPITHKF--LVKAYSRSEKADKILQIHEKLVASGLEL 773

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
                N LI  F       C     ++A  +   M+  G+  D++TY  LI G+C   ++
Sbjct: 774 SLTVYNTLITVF-------CRLGMTRKAKVVLDEMVKRGISADLVTYNALIRGYCTGSHV 826

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAK----ELFLEMKGRGI 224
             AL+ + +M    + +G+    NI +Y+ ++  L   GL+++      +L  EM  RG+
Sbjct: 827 EKALKTYSQM----FVDGI--APNITTYNTLLGGLSNAGLMEEMMEETEKLVSEMNERGL 880

Query: 225 NPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANG 284
            P       L+ G+   GN ++   L IEM+  G  P L T+NV+I    K GK+ EA  
Sbjct: 881 VPNAATYDILVSGYGRVGNRKKTIILHIEMITKGFVPTLKTYNVLISDYAKSGKMIEARE 940

Query: 285 LLELMIQRGLNPDRFTYNSLMDGY 308
           LL  ++ +G  P+ FTY+ L  G+
Sbjct: 941 LLNDLLTKGRIPNSFTYDILTCGW 964


>gi|224100421|ref|XP_002311869.1| predicted protein [Populus trichocarpa]
 gi|222851689|gb|EEE89236.1| predicted protein [Populus trichocarpa]
          Length = 470

 Score =  221 bits (564), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 132/397 (33%), Positives = 208/397 (52%), Gaps = 6/397 (1%)

Query: 147 GVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKE 206
           G  PDV++Y T+ING+C  G L   L+L ++M       GL  K N+++Y+ II  LCK 
Sbjct: 5   GDAPDVVSYSTVINGYCLGGELQKVLKLIQEMQM----KGL--KPNLYTYNSIILLLCKS 58

Query: 207 GLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTF 266
           G VD A+ +  EM  +GI P  VV TTLI GFC  GN +    LF EM      P+ + +
Sbjct: 59  GKVDDAERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAY 118

Query: 267 NVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHS 326
             +I  LC+ GK+ EA+ +   M  RG+ PD  TY +L+DGYC  G ++ A  +   M  
Sbjct: 119 TAVICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQ 178

Query: 327 KGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGY 386
            G    VV+Y  L +G CK+  V+ A  L  ++   G++  + TYN+L++GL ++G    
Sbjct: 179 SGLTPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQ 238

Query: 387 AQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLID 446
           A KL +EM++  + PD  T+  L+D  CK   + +A +L   +     +  +  FN L++
Sbjct: 239 AVKLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMN 298

Query: 447 GLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAP 506
           G C +G L++   L   + +KG++P   TY+ ++   C +  +    +    M   G  P
Sbjct: 299 GFCMSGMLEDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCARGVMP 358

Query: 507 NVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVP 543
           +  T+N L+ G  +     +   L  +MAE   NL  
Sbjct: 359 DSNTYNILIKGHCKARNMKEAWFLHKEMAEKGFNLTA 395



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 112/331 (33%), Positives = 184/331 (55%), Gaps = 2/331 (0%)

Query: 219 MKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGK 278
           MK RG  P VV  +T+I+G+C  G  ++V  L  EM   G +PNL T+N +I  LCK GK
Sbjct: 1   MKFRGDAPDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGK 60

Query: 279 INEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNI 338
           +++A  +L  MI +G+ PD   Y +L+DG+C +G I  A ++F  M  +      ++Y  
Sbjct: 61  VDDAERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTA 120

Query: 339 LINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYN 398
           +I G C+   + EA  ++ ++ S GV    +TY TL+ G  ++G+   A  L ++M    
Sbjct: 121 VICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSG 180

Query: 399 VEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAW 458
           + P++ TY  L DGLCK   V  A +L H +     +  I  +N L++GLCK+G +  A 
Sbjct: 181 LTPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAV 240

Query: 459 ELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGF 518
           +L  ++   G+ P  +T++ ++   C+ G++ KA++ L  M   G  P V+TFN LM+GF
Sbjct: 241 KLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGF 300

Query: 519 LQNNKTSKVVELLHKMAEPERNLVPDDTTFS 549
             +        LL  M   E+ ++P+ TT++
Sbjct: 301 CMSGMLEDGERLLAWML--EKGIMPNTTTYN 329



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 129/441 (29%), Positives = 224/441 (50%), Gaps = 13/441 (2%)

Query: 72  SPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVEN 131
           +P + S++ +            V+   +++   GL P+  T N +I         LC   
Sbjct: 7   APDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILL-------LCKSG 59

Query: 132 RIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKT 191
           ++ +A  + + MI  G+ PD + Y TLI+GFC+ GN+  A +L  +M     E   I   
Sbjct: 60  KVDDAERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEM-----EKQRIVP- 113

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
           +  +Y+ +I  LC+ G + +A ++F +M  RG+ P  V  TTLI G+C +G  E+   L 
Sbjct: 114 DFIAYTAVICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLH 173

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
            +M+  G  PN++T+  + D LCK G+++ AN LL  M  +GL  +  TYNSL++G C  
Sbjct: 174 NQMVQSGLTPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKS 233

Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
           G I  A ++   M   G     +++  L++ YCK   + +A  L R+++  G++ TVIT+
Sbjct: 234 GNIRQAVKLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITF 293

Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
           N L++G   +G     ++L   M    + P+ +TYN L+   C  N ++   +++  +  
Sbjct: 294 NVLMNGFCMSGMLEDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCA 353

Query: 432 NKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEK 491
                    +N LI G CKA  +  AW L  ++ +KG   T  +Y+ +I G  +K K+ +
Sbjct: 354 RGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMAEKGFNLTASSYNSIIKGFFKKKKISE 413

Query: 492 ANDFLLYMEKNGCAPNVVTFN 512
           A +    M + G A +   +N
Sbjct: 414 ARELFEEMRREGMAADAEIYN 434



 Score =  191 bits (486), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 128/412 (31%), Positives = 200/412 (48%), Gaps = 15/412 (3%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CKSG   +++A      M +    P    +  L     K  +  A    + ++    ++P
Sbjct: 56  CKSG--KVDDAERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVP 113

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           DF+    +I C      GLC   ++ EA  +F  M + GV PD +TY TLI+G+C++G +
Sbjct: 114 DFIAYTAVI-C------GLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEM 166

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
             A  LH +MV    ++GL    N+ +Y+ + D LCK G VD A EL  EM G+G+   +
Sbjct: 167 EKAFSLHNQMV----QSGLTP--NVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNI 220

Query: 229 VVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLEL 288
               +L++G C +GN  +   L  EM   G  P+ +TF  ++D  CK G++ +A+ LL  
Sbjct: 221 CTYNSLVNGLCKSGNIRQAVKLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLRE 280

Query: 289 MIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILN 348
           M+ RGL P   T+N LM+G+C+ G ++    +   M  KG      +YN L+  YC   N
Sbjct: 281 MLDRGLQPTVITFNVLMNGFCMSGMLEDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNN 340

Query: 349 VEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNI 408
           +     +Y+ + + GV     TYN L+ G  +A     A  L  EM         S+YN 
Sbjct: 341 MRCTTEIYKGMCARGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMAEKGFNLTASSYNS 400

Query: 409 LIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWEL 460
           +I G  K   + EA +LF  +         EI+N  +D     G ++ A EL
Sbjct: 401 IIKGFFKKKKISEARELFEEMRREGMAADAEIYNLFVDISYGEGNMETALEL 452



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 125/420 (29%), Positives = 203/420 (48%), Gaps = 13/420 (3%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
           P + ++N +   + K+   D      R++++ G++PD +    LI+       G C    
Sbjct: 43  PNLYTYNSIILLLCKSGKVDDAERVLREMINQGIVPDTVVYTTLID-------GFCKLGN 95

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
           I+ A  LF  M    + PD I Y  +I G CR G +  A ++  KM S   E       +
Sbjct: 96  IQAAYKLFDEMEKQRIVPDFIAYTAVICGLCRCGKMMEADKVFNKMFSRGVE------PD 149

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
             +Y+ +ID  CK G ++KA  L  +M   G+ P VV  T L  G C  G  +  N L  
Sbjct: 150 EVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPNVVTYTALADGLCKLGQVDTANELLH 209

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
           EM   G + N+ T+N +++ LCK G I +A  L+E M   G+ PD  T+ +LMD YC  G
Sbjct: 210 EMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEMEVAGMYPDTITFTTLMDAYCKTG 269

Query: 313 RIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYN 372
            +  A E+   M  +G + TV+++N+L+NG+C    +E+   L   ++  G+     TYN
Sbjct: 270 EMVKAHELLREMLDRGLQPTVITFNVLMNGFCMSGMLEDGERLLAWMLEKGIMPNTTTYN 329

Query: 373 TLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMN 432
           +L+             +++  M    V PD +TYNILI G CK   ++EA  L   +   
Sbjct: 330 SLMKQYCIRNNMRCTTEIYKGMCARGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMAEK 389

Query: 433 KFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKA 492
            F      +N +I G  K  ++  A ELF ++ ++G+      Y++ +     +G +E A
Sbjct: 390 GFNLTASSYNSIIKGFFKKKKISEARELFEEMRREGMAADAEIYNLFVDISYGEGNMETA 449



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 99/346 (28%), Positives = 163/346 (47%), Gaps = 17/346 (4%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           C+ G   + EA   F  M      P   ++  L     K+   +   S + ++V  GL P
Sbjct: 126 CRCG--KMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTP 183

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           + +T   L +       GLC   ++  A  L   M   G++ ++ TY +L+NG C++GN+
Sbjct: 184 NVVTYTALAD-------GLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNI 236

Query: 169 SVALRLHKKM-VSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPA 227
             A++L ++M V+G Y        +  +++ ++D+ CK G + KA EL  EM  RG+ P 
Sbjct: 237 RQAVKLMEEMEVAGMY-------PDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPT 289

Query: 228 VVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLE 287
           V+    L++GFC +G  E+   L   ML+ G  PN  T+N ++   C    +     + +
Sbjct: 290 VITFNVLMNGFCMSGMLEDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYK 349

Query: 288 LMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKIL 347
            M  RG+ PD  TYN L+ G+C    +  A  +   M  KG   T  SYN +I G+ K  
Sbjct: 350 GMCARGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMAEKGFNLTASSYNSIIKGFFKKK 409

Query: 348 NVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDE 393
            + EA  L+ ++   G+      YN  +   +  G    A +L DE
Sbjct: 410 KISEARELFEEMRREGMAADAEIYNLFVDISYGEGNMETALELCDE 455



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 58/230 (25%), Positives = 98/230 (42%), Gaps = 15/230 (6%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
           N  ++  CKSG  N+ +A      M      P   +F  L  A  K           R++
Sbjct: 224 NSLVNGLCKSG--NIRQAVKLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREM 281

Query: 102 VSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLING 161
           +  GL P  +T N+L+N       G C+   +++   L   M+  G+ P+  TY +L+  
Sbjct: 282 LDRGLQPTVITFNVLMN-------GFCMSGMLEDGERLLAWMLEKGIMPNTTTYNSLMKQ 334

Query: 162 FCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKG 221
           +C   N+     ++K M +     G++  +N  +Y+I+I   CK   + +A  L  EM  
Sbjct: 335 YCIRNNMRCTTEIYKGMCA----RGVMPDSN--TYNILIKGHCKARNMKEAWFLHKEMAE 388

Query: 222 RGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMID 271
           +G N       ++I GF       E   LF EM   G   +   +N+ +D
Sbjct: 389 KGFNLTASSYNSIIKGFFKKKKISEARELFEEMRREGMAADAEIYNLFVD 438


>gi|356524758|ref|XP_003530995.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17140-like [Glycine max]
          Length = 875

 Score =  221 bits (564), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 155/526 (29%), Positives = 263/526 (50%), Gaps = 42/526 (7%)

Query: 61  YFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCF 120
           + +  M   + +P   +FNLL  ++ ++R +D  +  + K+   G  P+  TL IL+   
Sbjct: 136 WLYSDMLAARVAPQTYTFNLLIHSLCESRAFDHALQLFEKMPQKGCCPNEFTLGILV--- 192

Query: 121 GNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVS 180
               RGLC    +K+A  L  N  +  +   V+ Y TL++ FCR    + A RL ++M  
Sbjct: 193 ----RGLCRAGLVKQALELVNNNNSCRIANRVV-YNTLVSRFCREEMNNEAERLVERM-- 245

Query: 181 GDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRG----INPAVVVCTTLIH 236
               N L    ++ +++  I +LC+ G V +A  +F +M+         P VV    ++ 
Sbjct: 246 ----NELGVLPDVVTFNSRISALCRAGKVMEASRIFRDMQMDAELGLPRPNVVTFNLMLK 301

Query: 237 GFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNP 296
           GFC  G   +  GL   M  +G   +L  +N+ +  L + G++ EA  +L+ M+ +G+ P
Sbjct: 302 GFCKHGMMGDARGLVETMKKVGNFDSLECYNIWLMGLLRNGELLEARLVLDEMVAKGIEP 361

Query: 297 DRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLY 356
           + +TYN +MDG C    +  AR +   M   G     V+Y+ L++GYC    V EA S+ 
Sbjct: 362 NAYTYNIMMDGLCRNHMLSDARGLMDLMMRNGVYPDTVAYSTLLHGYCSRGKVFEAKSVL 421

Query: 357 RQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKN 416
            ++I NG +    T NTLL  L++ G+   A+++  +M     +PD  T NI+++GLC+N
Sbjct: 422 HEMIRNGCQPNTYTCNTLLHSLWKEGRTLEAEEMLQKMNEKCYQPDTVTCNIVVNGLCRN 481

Query: 417 NCVQEAVKLFHML---------EMNKFEFGI----EIFNC---------LIDGLCKAGRL 454
             + +A ++   +         + N F   I     + NC         LI+GLCK GRL
Sbjct: 482 GELDKASEIVSEMWTNGPTSLDKGNSFASLINSIHNVSNCLPDGITYTTLINGLCKVGRL 541

Query: 455 DNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTL 514
           + A + F ++  K L P  VTY   I   C++GK+  A   L  ME+NGC+  + T+N L
Sbjct: 542 EEAKKKFIEMLAKNLRPDSVTYDTFIWSFCKQGKISSAFRVLKDMERNGCSKTLQTYNAL 601

Query: 515 MHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEK 560
           + G   NN+  ++  L  +M   E+ + PD  T++ ++  L +  K
Sbjct: 602 ILGLGSNNQIFEIYGLKDEMK--EKGISPDICTYNNIITCLCEGGK 645



 Score =  181 bits (460), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 138/556 (24%), Positives = 250/556 (44%), Gaps = 41/556 (7%)

Query: 19  VKLSSLFKSPRQIAAVSSPETQL---NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPI 75
           ++ S +F+  +  A +  P   +   N  L   CK G+  + +AR     M  +     +
Sbjct: 271 MEASRIFRDMQMDAELGLPRPNVVTFNLMLKGFCKHGM--MGDARGLVETMKKVGNFDSL 328

Query: 76  SSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKE 135
             +N+    + +N           ++V+ G+ P+  T NI+++       GLC  + + +
Sbjct: 329 ECYNIWLMGLLRNGELLEARLVLDEMVAKGIEPNAYTYNIMMD-------GLCRNHMLSD 381

Query: 136 ATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFS 195
           A  L   M+  GV PD + Y TL++G+C  G +  A  +  +M+     NG   + N ++
Sbjct: 382 ARGLMDLMMRNGVYPDTVAYSTLLHGYCSRGKVFEAKSVLHEMI----RNG--CQPNTYT 435

Query: 196 YSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEML 255
            + ++ SL KEG   +A+E+  +M  +   P  V C  +++G C  G  ++ + +  EM 
Sbjct: 436 CNTLLHSLWKEGRTLEAEEMLQKMNEKCYQPDTVTCNIVVNGLCRNGELDKASEIVSEMW 495

Query: 256 DLGPR----------------------PNLLTFNVMIDCLCKGGKINEANGLLELMIQRG 293
             GP                       P+ +T+  +I+ LCK G++ EA      M+ + 
Sbjct: 496 TNGPTSLDKGNSFASLINSIHNVSNCLPDGITYTTLINGLCKVGRLEEAKKKFIEMLAKN 555

Query: 294 LNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAM 353
           L PD  TY++ +  +C  G+I +A  +   M   GC  T+ +YN LI G      + E  
Sbjct: 556 LRPDSVTYDTFIWSFCKQGKISSAFRVLKDMERNGCSKTLQTYNALILGLGSNNQIFEIY 615

Query: 354 SLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGL 413
            L  ++   G+   + TYN +++ L + G+A  A  L  EM    + P++S++ ILI   
Sbjct: 616 GLKDEMKEKGISPDICTYNNIITCLCEGGKAKDAISLLHEMLDKGISPNVSSFKILIKAF 675

Query: 414 CKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTV 473
            K++  + A +LF  + +N       +++ + + L   G+L  A ELF     + L    
Sbjct: 676 SKSSDFKVACELFE-VALNICGRKEALYSLMFNELLAGGQLSEAKELFEVSLDRYLTLKN 734

Query: 474 VTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHK 533
             Y  +I  LC+  +L  AN  L  +   G   +  +F  ++ G  +     +  EL  +
Sbjct: 735 FMYKDLIARLCQDERLADANSLLYKLIDKGYGFDHASFMPVIDGLSKRGNKRQADELAKR 794

Query: 534 MAEPERNLVPDDTTFS 549
           M E E    P D T+S
Sbjct: 795 MMELELEDRPVDRTYS 810



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 115/411 (27%), Positives = 199/411 (48%), Gaps = 46/411 (11%)

Query: 199 IIDSLCKEGLVDKAKELFLEMKGR--GINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLD 256
           ++  L + G VD A   F  ++ +   ++P++ +   L+           V+ L+ +ML 
Sbjct: 84  MVRVLAQLGHVDDAITHFKSLRAQFPSLSPSLPLYNLLLRSTLRHHRPGFVSWLYSDMLA 143

Query: 257 LGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDT 316
               P   TFN++I  LC+    + A  L E M Q+G  P+ FT   L+ G C  G +  
Sbjct: 144 ARVAPQTYTFNLLIHSLCESRAFDHALQLFEKMPQKGCCPNEFTLGILVRGLCRAGLVKQ 203

Query: 317 AREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLS 376
           A E+  + +S    + VV YN L++ +C+     EA  L  ++   GV   V+T+N+ +S
Sbjct: 204 ALELVNNNNSCRIANRVV-YNTLVSRFCREEMNNEAERLVERMNELGVLPDVVTFNSRIS 262

Query: 377 GLFQAGQAGYAQKLFDEMKLYNVE-----PDLSTYNILIDGLCKNNCVQEAVKLFH-MLE 430
            L +AG+   A ++F +M++ + E     P++ T+N+++ G CK+  + +A  L   M +
Sbjct: 263 ALCRAGKVMEASRIFRDMQM-DAELGLPRPNVVTFNLMLKGFCKHGMMGDARGLVETMKK 321

Query: 431 MNKFEF------------------------------GIE----IFNCLIDGLCKAGRLDN 456
           +  F+                               GIE     +N ++DGLC+   L +
Sbjct: 322 VGNFDSLECYNIWLMGLLRNGELLEARLVLDEMVAKGIEPNAYTYNIMMDGLCRNHMLSD 381

Query: 457 AWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMH 516
           A  L   + + G+ P  V YS ++HG C +GK+ +A   L  M +NGC PN  T NTL+H
Sbjct: 382 ARGLMDLMMRNGVYPDTVAYSTLLHGYCSRGKVFEAKSVLHEMIRNGCQPNTYTCNTLLH 441

Query: 517 GFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAV 567
              +  +T +  E+L KM   E+   PD  T +IVV+ L ++ +  + S +
Sbjct: 442 SLWKEGRTLEAEEMLQKMN--EKCYQPDTVTCNIVVNGLCRNGELDKASEI 490



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 94/377 (24%), Positives = 171/377 (45%), Gaps = 38/377 (10%)

Query: 196 YSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEML 255
           Y++++ S  +         L+ +M    + P       LIH  C +  ++    LF +M 
Sbjct: 118 YNLLLRSTLRHHRPGFVSWLYSDMLAARVAPQTYTFNLLIHSLCESRAFDHALQLFEKMP 177

Query: 256 DLGPRPNLLTFNVMIDCLCKGGKI----------------------------------NE 281
             G  PN  T  +++  LC+ G +                                  NE
Sbjct: 178 QKGCCPNEFTLGILVRGLCRAGLVKQALELVNNNNSCRIANRVVYNTLVSRFCREEMNNE 237

Query: 282 ANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKG----CKHTVVSYN 337
           A  L+E M + G+ PD  T+NS +   C  G++  A  IF  M         +  VV++N
Sbjct: 238 AERLVERMNELGVLPDVVTFNSRISALCRAGKVMEASRIFRDMQMDAELGLPRPNVVTFN 297

Query: 338 ILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLY 397
           +++ G+CK   + +A  L   +   G   ++  YN  L GL + G+   A+ + DEM   
Sbjct: 298 LMLKGFCKHGMMGDARGLVETMKKVGNFDSLECYNIWLMGLLRNGELLEARLVLDEMVAK 357

Query: 398 NVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNA 457
            +EP+  TYNI++DGLC+N+ + +A  L  ++  N        ++ L+ G C  G++  A
Sbjct: 358 GIEPNAYTYNIMMDGLCRNHMLSDARGLMDLMMRNGVYPDTVAYSTLLHGYCSRGKVFEA 417

Query: 458 WELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHG 517
             + H++ + G  P   T + ++H L ++G+  +A + L  M +    P+ VT N +++G
Sbjct: 418 KSVLHEMIRNGCQPNTYTCNTLLHSLWKEGRTLEAEEMLQKMNEKCYQPDTVTCNIVVNG 477

Query: 518 FLQNNKTSKVVELLHKM 534
             +N +  K  E++ +M
Sbjct: 478 LCRNGELDKASEIVSEM 494


>gi|18071401|gb|AAL58260.1|AC068923_2 putative membrane-associated protein [Oryza sativa Japonica Group]
          Length = 627

 Score =  221 bits (563), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 153/526 (29%), Positives = 247/526 (46%), Gaps = 50/526 (9%)

Query: 66  MTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKER 125
           M   + SP + ++N +  A+ K +  D  +     +V  G++PD +T N +++       
Sbjct: 107 MLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVH------- 159

Query: 126 GLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYEN 185
           G C   + KEA    K M + GV PDV+TY +L++  C+ G  + A ++   M     + 
Sbjct: 160 GFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMT----KR 215

Query: 186 GLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWE 245
           GL  K +I +Y  ++     +G + +   L   M   GI+P   V + L+  +      E
Sbjct: 216 GL--KPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVE 273

Query: 246 EVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLM 305
           E   +F +M   G  PN +T+  +ID LCK G++ +A    E MI  GL PD   YNSL+
Sbjct: 274 EAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLI 333

Query: 306 DGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVR 365
              C+  + + A E+FL M  +G   + + +N +I+ +CK   V E+  L+  ++  GV+
Sbjct: 334 HSLCIFDKWEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGRVIESGKLFDLMVRIGVK 393

Query: 366 QTVITYNTLLSGLFQAGQAGYAQKLF--------------DEMKLYNVE----------- 400
             +IT    L      G A     LF              D+ K   V            
Sbjct: 394 PDIITLGRFL------GSARRDYSLFVNIYFIFTNMSNTGDKEKETPVNTNGGNTASNSS 447

Query: 401 --PDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAW 458
             P L TYNI++ GLCKN    +A+++F  L +   +     FN +ID L K GR D A 
Sbjct: 448 GGPFLGTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAK 507

Query: 459 ELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGF 518
           +LF      GLVP   TY +M   +  +G LE+ +   L ME NGC  +    N ++   
Sbjct: 508 DLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVREL 567

Query: 519 LQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLA--KDEKYH 562
           LQ  + ++    L  + E   +L  + +T S+ +DLL+  K ++YH
Sbjct: 568 LQRGEITRAGTYLSMIDEKHFSL--EASTASLFIDLLSGGKYQEYH 611



 Score =  195 bits (495), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 144/482 (29%), Positives = 234/482 (48%), Gaps = 61/482 (12%)

Query: 107 LPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFG--VRPDVITYGTLINGFCR 164
           +PD  + NIL+N       GLC ENR +EA  L   M   G    PDV++Y T+INGF +
Sbjct: 48  IPDVFSYNILLN-------GLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVINGFFK 100

Query: 165 TGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGI 224
            G+L    ++  + +S           N+ +Y+ II +LCK   VDKA E+   M   G+
Sbjct: 101 EGDLD---KMLDQRIS----------PNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGV 147

Query: 225 NPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANG 284
            P  +   +++HGFC +G  +E      +M   G  P+++T+N ++D LCK G+  EA  
Sbjct: 148 MPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARK 207

Query: 285 LLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYC 344
           + + M +RGL PD  TY +L+ GY   G +     +   M   G       ++IL+  Y 
Sbjct: 208 IFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYA 267

Query: 345 KILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLS 404
           K   VEEAM ++ ++   G+    +TY T++  L ++G+   A   F++M    + PD  
Sbjct: 268 KQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSI 327

Query: 405 TYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEI----FNCLIDGLCKAGRLDNAWEL 460
            YN LI  LC  +  ++A +LF  LEM   + GI +    FN +ID  CK GR+  + +L
Sbjct: 328 VYNSLIHSLCIFDKWEKAEELF--LEM--LDRGICLSTIFFNSIIDSHCKEGRVIESGKL 383

Query: 461 FHKLPQKGLVPTVVT-----------YSIMIH------GLCRKGKLEKANDFLLYMEKNG 503
           F  + + G+ P ++T           YS+ ++       +   G  EK       +  NG
Sbjct: 384 FDLMVRIGVKPDIITLGRFLGSARRDYSLFVNIYFIFTNMSNTGDKEKETP----VNTNG 439

Query: 504 --------CAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLL 555
                     P + T+N ++HG  +N  T   + +   +   +  L  +  TF+I++D L
Sbjct: 440 GNTASNSSGGPFLGTYNIILHGLCKNKLTDDALRMFQNLCLMDLKL--EARTFNIMIDAL 497

Query: 556 AK 557
            K
Sbjct: 498 LK 499



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 97/356 (27%), Positives = 180/356 (50%), Gaps = 12/356 (3%)

Query: 210 DKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPR--PNLLTFN 267
           + A+ +F E+  RGI P V     L++G C     +E   L   M D G    P++++++
Sbjct: 34  EDARHVFDELLRRGI-PDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYS 92

Query: 268 VMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSK 327
            +I+   K G +++       M+ + ++P+  TYNS++   C    +D A E+  +M   
Sbjct: 93  TVINGFFKEGDLDK-------MLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKS 145

Query: 328 GCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYA 387
           G     ++YN +++G+C     +EA+   +++ S+GV   V+TYN+L+  L + G+   A
Sbjct: 146 GVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEA 205

Query: 388 QKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDG 447
           +K+FD M    ++PD++TY  L+ G      + E   L  ++  N       +F+ L+  
Sbjct: 206 RKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCA 265

Query: 448 LCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPN 507
             K  +++ A  +F K+ Q+GL P  VTY  +I  LC+ G++E A  +   M   G  P+
Sbjct: 266 YAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPD 325

Query: 508 VVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
            + +N+L+H     +K  K  EL  +M   +R +      F+ ++D   K+ +  E
Sbjct: 326 SIVYNSLIHSLCIFDKWEKAEELFLEML--DRGICLSTIFFNSIIDSHCKEGRVIE 379



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 120/480 (25%), Positives = 205/480 (42%), Gaps = 45/480 (9%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
           N  +H  C SG     EA  F   M      P + ++N L   + KN         +  +
Sbjct: 155 NSIVHGFCSSG--QPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSM 212

Query: 102 VSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLING 161
              GL PD  T   L+       +G   +  + E   L   M+  G+ P+   +  L+  
Sbjct: 213 TKRGLKPDITTYGTLL-------QGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCA 265

Query: 162 FCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKG 221
           + +   +  A+ +  KM     + GL    N  +Y  +ID LCK G V+ A   F +M  
Sbjct: 266 YAKQEKVEEAMLVFSKM----RQQGL--NPNAVTYGTVIDVLCKSGRVEDAMLYFEQMID 319

Query: 222 RGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINE 281
            G+ P  +V  +LIH  C    WE+   LF+EMLD G   + + FN +ID  CK G++ E
Sbjct: 320 EGLRPDSIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGRVIE 379

Query: 282 ANGLLELMIQRGLNPD-----RFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVV-- 334
           +  L +LM++ G+ PD     RF  ++  D Y L   I     IF +M + G K      
Sbjct: 380 SGKLFDLMVRIGVKPDIITLGRFLGSARRD-YSLFVNI---YFIFTNMSNTGDKEKETPV 435

Query: 335 ------------------SYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLS 376
                             +YNI+++G CK    ++A+ +++ +    ++    T+N ++ 
Sbjct: 436 NTNGGNTASNSSGGPFLGTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMID 495

Query: 377 GLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEF 436
            L + G+   A+ LF       + P+  TY ++ + +     ++E  +LF  +E N    
Sbjct: 496 ALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTV 555

Query: 437 GIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFL 496
              + N ++  L + G +  A      + +K       T S+ I  L   GK ++ + FL
Sbjct: 556 DSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFID-LLSGGKYQEYHIFL 614


>gi|116309903|emb|CAH66938.1| OSIGBa0116M22.5 [Oryza sativa Indica Group]
          Length = 568

 Score =  221 bits (563), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 145/490 (29%), Positives = 237/490 (48%), Gaps = 26/490 (5%)

Query: 74  PISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRI 133
           P S  NLL  A A  R +   +  Y ++ S+ L     +L+ L++   +           
Sbjct: 87  PSSLPNLLLTASAAVRPHATSLRLYSRMKSLSLPISTASLHPLLSALPSAP--------- 137

Query: 134 KEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNI 193
             A  LF +M    +     T+  ++   C  G  + AL L ++M           + N 
Sbjct: 138 --AFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQM----------PRPNA 185

Query: 194 FSYSIIIDSLCKEGLVDKAKELFLEMKGRG-INPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
            +Y+ +I   C  G V  A ++  EM+ RG I P      T+I G+C  G  +E   +F 
Sbjct: 186 VTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFD 245

Query: 253 EMLDLGP-RPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
           EML  G  +P  + +N +I   C  GK++ A    + M++RG+     TYN L+    + 
Sbjct: 246 EMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMD 305

Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
           GR   A E+   M  KG    V +YNILING+CK  NV++A+ ++  +   GVR TV+TY
Sbjct: 306 GRGTEAYELVEEMGGKGLALDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTY 365

Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
            +L+  L + GQ     KLFDE     + PDL  YN LI+    +  +  A ++   +E 
Sbjct: 366 TSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEK 425

Query: 432 NKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEK 491
            +       +N L+ GLC  GR+D A +L  ++ ++G+ P +VTY+ +I G   KG ++ 
Sbjct: 426 KRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKD 485

Query: 492 ANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTF-SI 550
           A      M   G  P ++T+N L+ G  +N +      ++ +M   E  + PDD+T+ S+
Sbjct: 486 ALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMV--ENGITPDDSTYISL 543

Query: 551 VVDLLAKDEK 560
           +  L  +DE+
Sbjct: 544 IEGLTTEDER 553



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 61/227 (26%), Positives = 99/227 (43%), Gaps = 36/227 (15%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
           N  ++ +CK G  N+ +A   F  M+       + ++  L  A++K          + + 
Sbjct: 331 NILINGHCKEG--NVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEA 388

Query: 102 VSIGLLPDFLTLNILINCF---GNKE-------------------------RGLCVENRI 133
           V  G+ PD +  N LIN     GN +                         RGLC+  R+
Sbjct: 389 VRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRV 448

Query: 134 KEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNI 193
            EA  L   M   G++PD++TY TLI+G+   G++  ALR+  +M++  +   L+     
Sbjct: 449 DEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLL----- 503

Query: 194 FSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCC 240
            +Y+ +I  LCK G  D A+ +  EM   GI P      +LI G   
Sbjct: 504 -TYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTT 549


>gi|222636757|gb|EEE66889.1| hypothetical protein OsJ_23712 [Oryza sativa Japonica Group]
          Length = 579

 Score =  221 bits (563), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 141/467 (30%), Positives = 235/467 (50%), Gaps = 16/467 (3%)

Query: 97  FYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYG 156
           F+ +L + GL PD ++   +I         LC   R+ EA  LF  M A    P    Y 
Sbjct: 5   FFHELKAQGLKPDDVSYTSMIWV-------LCKAGRLGEAEELFAQMEAERSVPCAYAYN 57

Query: 157 TLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELF 216
           T+I G+   G    A +L +++     E G I   ++ S++ I+  L K+  VD+A  LF
Sbjct: 58  TMIMGYGSAGRFEDAYKLLERL----RERGCIP--SVVSFNSILTCLGKKRKVDEALSLF 111

Query: 217 LEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKG 276
             MK +   P       +I   C  G  EE   +  EM      PNLLT N+M+D LCK 
Sbjct: 112 EVMK-KDAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKA 170

Query: 277 GKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSY 336
            K+ EA  + E   QRG NPD  TY SL+DG    G++D A  +F  M   G     V Y
Sbjct: 171 RKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVY 230

Query: 337 NILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKL 396
             LI  +      E+   +++++I  G +  +   NT +  +F+AG+    + +F++++ 
Sbjct: 231 TSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRS 290

Query: 397 YNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDN 456
           Y   PD+ +Y+ILI GL K    +E   +FH ++   F      +N ++DG CK+G++  
Sbjct: 291 YGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHK 350

Query: 457 AWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMH 516
           A+E+  ++ +K + PTV TY  ++ GL +  +L++A       +  G   NVV +++L+ 
Sbjct: 351 AYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLID 410

Query: 517 GFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
           GF +  +  +   +L +M   ++ L P+  T++ ++D L K E+ +E
Sbjct: 411 GFGKVGRIDEAYLILEEMM--KKGLTPNVYTWNSLLDALVKAEEINE 455



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 126/470 (26%), Positives = 232/470 (49%), Gaps = 14/470 (2%)

Query: 55  NLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLN 114
            ++EA   F  M      P  S++N++   +      +       ++    L P+ LT+N
Sbjct: 103 KVDEALSLFEVMKK-DAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVN 161

Query: 115 ILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRL 174
           I+++        LC   +++EA  +F++    G  PD +TY +LI+G  + G +  A RL
Sbjct: 162 IMVD-------RLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRL 214

Query: 175 HKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTL 234
            +KM+   +        N   Y+ +I +    G  +   ++F E+  RG  P + +  T 
Sbjct: 215 FEKMLDAGH------NANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTY 268

Query: 235 IHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGL 294
           +     AG  E+   +F ++   G  P++ +++++I  L K G+  E + +   M Q+G 
Sbjct: 269 MDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGF 328

Query: 295 NPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMS 354
             D   YN+++DG+C  G++  A EI   M  K  + TV +Y  +++G  KI  ++EA  
Sbjct: 329 ALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYM 388

Query: 355 LYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLC 414
           L+ +  S G+   V+ Y++L+ G  + G+   A  + +EM    + P++ T+N L+D L 
Sbjct: 389 LFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALV 448

Query: 415 KNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVV 474
           K   + EA+  F  ++  K       ++ LI+GLC+  + + A+  +  + ++GLVP VV
Sbjct: 449 KAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVV 508

Query: 475 TYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKT 524
           TY+ MI GL + G +  A       + NG  P+  +FN L+ G    N+ 
Sbjct: 509 TYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIEGMSNANRA 558



 Score =  213 bits (541), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 145/540 (26%), Positives = 243/540 (45%), Gaps = 53/540 (9%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CK+G   L EA   F  M   +  P   ++N +         ++       +L   G +P
Sbjct: 29  CKAG--RLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIP 86

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
             ++ N ++ C G K        ++ EA  LF+ M      P+  TY  +I+  C  G +
Sbjct: 87  SVVSFNSILTCLGKK-------RKVDEALSLFEVMKK-DAEPNSSTYNIIIDMLCLGGRV 138

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
             A R+  +M     E+  +   N+ + +I++D LCK   +++A ++F     RG NP  
Sbjct: 139 EEAYRILDEM-----EHASLF-PNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDC 192

Query: 229 VVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLEL 288
           V   +LI G    G  +E   LF +MLD G   N + +  +I      G+  + + + + 
Sbjct: 193 VTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKE 252

Query: 289 MIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILN 348
           +I+RG  PD    N+ MD     G ++  R IF  + S G    V SY+ILI+G  K   
Sbjct: 253 LIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQ 312

Query: 349 VEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNI 408
             E  +++  +   G       YN ++ G  ++G+   A ++ +EMK   V+P ++TY  
Sbjct: 313 ARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGA 372

Query: 409 LIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKG 468
           ++DGL K + + EA  LF   +    E  + +++ LIDG  K GR+D A+ +  ++ +KG
Sbjct: 373 IVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKG 432

Query: 469 LVPTV-----------------------------------VTYSIMIHGLCRKGKLEKAN 493
           L P V                                    TYSI+I+GLCR  K  KA 
Sbjct: 433 LTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAF 492

Query: 494 DFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
            F   M+K G  PNVVT+ T++ G  +    +    L  +        +PD  +F+ +++
Sbjct: 493 VFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERF--KANGGIPDAASFNALIE 550



 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 113/407 (27%), Positives = 204/407 (50%), Gaps = 3/407 (0%)

Query: 190 KTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNG 249
           K +  SY+ +I  LCK G + +A+ELF +M+     P      T+I G+  AG +E+   
Sbjct: 15  KPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYK 74

Query: 250 LFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYC 309
           L   + + G  P++++FN ++ CL K  K++EA  L E+M ++   P+  TYN ++D  C
Sbjct: 75  LLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVM-KKDAEPNSSTYNIIIDMLC 133

Query: 310 LVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVI 369
           L GR++ A  I   M        +++ NI+++  CK   +EEA  ++      G     +
Sbjct: 134 LGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCV 193

Query: 370 TYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHML 429
           TY +L+ GL + GQ   A +LF++M       +   Y  LI     +   ++  K+F  L
Sbjct: 194 TYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKEL 253

Query: 430 EMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKL 489
                +  + + N  +D + KAG ++    +F  +   G +P V +YSI+IHGL + G+ 
Sbjct: 254 IRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQA 313

Query: 490 EKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFS 549
            + ++    M++ G A +   +N ++ GF ++ K  K  E+L +M   E+ + P   T+ 
Sbjct: 314 RETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEM--KEKCVQPTVATYG 371

Query: 550 IVVDLLAKDEKYHECSAVSKSSYRACLYVTIFQPSSLGSMIGCTVRL 596
            +VD LAK ++  E   + + +    + + +   SSL    G   R+
Sbjct: 372 AIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRI 418



 Score =  142 bits (357), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 89/318 (27%), Positives = 154/318 (48%), Gaps = 3/318 (0%)

Query: 250 LFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYC 309
            F E+   G +P+ +++  MI  LCK G++ EA  L   M      P  + YN+++ GY 
Sbjct: 5   FFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYG 64

Query: 310 LVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVI 369
             GR + A ++   +  +GC  +VVS+N ++    K   V+EA+SL+ +++         
Sbjct: 65  SAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLF-EVMKKDAEPNSS 123

Query: 370 TYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHML 429
           TYN ++  L   G+   A ++ DEM+  ++ P+L T NI++D LCK   ++EA K+F   
Sbjct: 124 TYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESA 183

Query: 430 EMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKL 489
                      +  LIDGL K G++D A+ LF K+   G     V Y+ +I      G+ 
Sbjct: 184 SQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRK 243

Query: 490 EKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFS 549
           E  +     + + GC P++   NT M    +  +  K   +   +       +PD  ++S
Sbjct: 244 EDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIR--SYGFLPDVRSYS 301

Query: 550 IVVDLLAKDEKYHECSAV 567
           I++  L K  +  E S +
Sbjct: 302 ILIHGLTKAGQARETSNI 319



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 64/227 (28%), Positives = 112/227 (49%), Gaps = 1/227 (0%)

Query: 317 AREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLS 376
           A + F  + ++G K   VSY  +I   CK   + EA  L+ Q+ +         YNT++ 
Sbjct: 2   AWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIM 61

Query: 377 GLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEF 436
           G   AG+   A KL + ++     P + ++N ++  L K   V EA+ LF +++ +  E 
Sbjct: 62  GYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDA-EP 120

Query: 437 GIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFL 496
               +N +ID LC  GR++ A+ +  ++    L P ++T +IM+  LC+  KLE+A    
Sbjct: 121 NSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIF 180

Query: 497 LYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVP 543
               + GC P+ VT+ +L+ G  +  +  +   L  KM +   N  P
Sbjct: 181 ESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANP 227



 Score = 86.7 bits (213), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 56/190 (29%), Positives = 100/190 (52%), Gaps = 4/190 (2%)

Query: 387 AQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLID 446
           A K F E+K   ++PD  +Y  +I  LCK   + EA +LF  +E  +       +N +I 
Sbjct: 2   AWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIM 61

Query: 447 GLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAP 506
           G   AGR ++A++L  +L ++G +P+VV+++ ++  L +K K+++A      M+K+   P
Sbjct: 62  GYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDA-EP 120

Query: 507 NVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSA 566
           N  T+N ++       +  +   +L +M     +L P+  T +I+VD L K  K  E   
Sbjct: 121 NSSTYNIIIDMLCLGGRVEEAYRILDEMEHA--SLFPNLLTVNIMVDRLCKARKLEEAYK 178

Query: 567 VSKS-SYRAC 575
           + +S S R C
Sbjct: 179 IFESASQRGC 188


>gi|224132422|ref|XP_002328265.1| predicted protein [Populus trichocarpa]
 gi|222837780|gb|EEE76145.1| predicted protein [Populus trichocarpa]
          Length = 742

 Score =  221 bits (563), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 160/557 (28%), Positives = 256/557 (45%), Gaps = 77/557 (13%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
           P I  +N+L  +  K    D V    + +V+ G+ P+  T N+LI         LC    
Sbjct: 19  PSIYLYNVLLRSCTKEGRVDCVSWLCKDMVASGVSPETYTFNVLIGL-------LCDSGC 71

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
           + +A  LF  M   G  P+  ++G L+ G+CR G  S  L L  +M        L    N
Sbjct: 72  LDDARELFDKMPEKGCEPNEYSFGILVRGYCRAGFTSKGLELLGEM------RRLGFSPN 125

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
              Y+ +I S CKEG  D A++L  EM+  G++P VV     I   C +G   E + +F 
Sbjct: 126 KVVYNTLISSFCKEGKTDDAEKLVDEMRKDGLSPDVVTFNARISALCSSGKVLEASRIFR 185

Query: 253 EM-LD--LG-PRPNLLTFNVMIDCLCKGGKINEANGLLELM------------------- 289
           +M +D  LG P+PN++T+N+M+   CK G + EA  L E M                   
Sbjct: 186 DMQIDEVLGLPQPNIITYNLMLGGFCKEGMLEEARALFEKMKVSENLMNRESYNIWLLGL 245

Query: 290 ----------------IQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTV 333
                           +  G+ P+ ++YN +MDG C  G +  AR +   M S G     
Sbjct: 246 VRIGKLLEAQLVLKEMVDMGMEPNVYSYNIVMDGLCKNGVLFDARMLMRLMTSSGVLPDT 305

Query: 334 VSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDE 393
           V+Y  L++GYC    V EA ++ R+++ +G      T N LL  L++ G+   A++L  +
Sbjct: 306 VTYTTLLHGYCHTGKVSEANNVLREMMRDGCSPNNYTCNILLYSLWKEGRISEAEELLQK 365

Query: 394 MKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFH-MLEMNKFEFG--------------- 437
           M       D  T NI+IDGLC N  + +A+++ + M        G               
Sbjct: 366 MNEKGYVIDTVTCNIVIDGLCNNGKLDKAIEIVNGMWTHGSAALGNLGNSYIGLVDDSDS 425

Query: 438 -------IEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLE 490
                  +  ++ +I GLCKAGR+  A + F ++  K L P    Y + IH  C++GK+ 
Sbjct: 426 RKKCMPDLISYSTIISGLCKAGRVGEAKKKFIEMMGKNLQPDSAIYDVFIHSFCKEGKIS 485

Query: 491 KANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSI 550
            A   L  MEK GC   + T+N+L+ G    N+  ++  L+ +M   ER + PD + ++ 
Sbjct: 486 SAFRVLKDMEKKGCNKTLQTYNSLIMGLGSKNQIFEIYGLIDEMR--ERGVSPDVSIYNN 543

Query: 551 VVDLLAKDEKYHECSAV 567
           V+  L +  +  +  +V
Sbjct: 544 VLSSLCEGGRVKDAPSV 560



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 147/517 (28%), Positives = 248/517 (47%), Gaps = 54/517 (10%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           C++G  +  +     G M  +  SP    +N L  +  K    D       ++   GL P
Sbjct: 102 CRAGFTS--KGLELLGEMRRLGFSPNKVVYNTLISSFCKEGKTDDAEKLVDEMRKDGLSP 159

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGV----RPDVITYGTLINGFCR 164
           D +T N  I+        LC   ++ EA+ +F++M    V    +P++ITY  ++ GFC+
Sbjct: 160 DVVTFNARIS-------ALCSSGKVLEASRIFRDMQIDEVLGLPQPNIITYNLMLGGFCK 212

Query: 165 TGNLSVALRLHKKM-VSGDYEN---------GLIS-------------------KTNIFS 195
            G L  A  L +KM VS +  N         GL+                    + N++S
Sbjct: 213 EGMLEEARALFEKMKVSENLMNRESYNIWLLGLVRIGKLLEAQLVLKEMVDMGMEPNVYS 272

Query: 196 YSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEML 255
           Y+I++D LCK G++  A+ L   M   G+ P  V  TTL+HG+C  G   E N +  EM+
Sbjct: 273 YNIVMDGLCKNGVLFDARMLMRLMTSSGVLPDTVTYTTLLHGYCHTGKVSEANNVLREMM 332

Query: 256 DLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRID 315
             G  PN  T N+++  L K G+I+EA  LL+ M ++G   D  T N ++DG C  G++D
Sbjct: 333 RDGCSPNNYTCNILLYSLWKEGRISEAEELLQKMNEKGYVIDTVTCNIVIDGLCNNGKLD 392

Query: 316 TAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLL 375
            A EI   M +    H   +   L N Y  +++  ++               +I+Y+T++
Sbjct: 393 KAIEIVNGMWT----HGSAALGNLGNSYIGLVDDSDS--------RKKCMPDLISYSTII 440

Query: 376 SGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFE 435
           SGL +AG+ G A+K F EM   N++PD + Y++ I   CK   +  A ++   +E     
Sbjct: 441 SGLCKAGRVGEAKKKFIEMMGKNLQPDSAIYDVFIHSFCKEGKISSAFRVLKDMEKKGCN 500

Query: 436 FGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDF 495
             ++ +N LI GL    ++   + L  ++ ++G+ P V  Y+ ++  LC  G+++ A   
Sbjct: 501 KTLQTYNSLIMGLGSKNQIFEIYGLIDEMRERGVSPDVSIYNNVLSSLCEGGRVKDAPSV 560

Query: 496 LLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLH 532
           L  M + G +PN+ +F+ L+  F +    S V E+  
Sbjct: 561 LDEMLQKGISPNISSFSILIKAFCKACDFSAVDEIFE 597



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 140/512 (27%), Positives = 237/512 (46%), Gaps = 41/512 (8%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNL-LFGAVAKNRHYDAVISFYRKLVSIGLL 107
           CK G+  L EAR  F  M   +      S+N+ L G V   +  +A +   +++V +G+ 
Sbjct: 211 CKEGM--LEEARALFEKMKVSENLMNRESYNIWLLGLVRIGKLLEAQLVL-KEMVDMGME 267

Query: 108 PDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGN 167
           P+  + NI+++       GLC    + +A  L + M + GV PD +TY TL++G+C TG 
Sbjct: 268 PNVYSYNIVMD-------GLCKNGVLFDARMLMRLMTSSGVLPDTVTYTTLLHGYCHTGK 320

Query: 168 LSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPA 227
           +S A  + ++M+            N ++ +I++ SL KEG + +A+EL  +M  +G    
Sbjct: 321 VSEANNVLREMMRDG------CSPNNYTCNILLYSLWKEGRISEAEELLQKMNEKGYVID 374

Query: 228 VVVCTTLIHGFCCAGNWEE----VNGL--------------FIEMLDLGPR-----PNLL 264
            V C  +I G C  G  ++    VNG+              +I ++D         P+L+
Sbjct: 375 TVTCNIVIDGLCNNGKLDKAIEIVNGMWTHGSAALGNLGNSYIGLVDDSDSRKKCMPDLI 434

Query: 265 TFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSM 324
           +++ +I  LCK G++ EA      M+ + L PD   Y+  +  +C  G+I +A  +   M
Sbjct: 435 SYSTIISGLCKAGRVGEAKKKFIEMMGKNLQPDSAIYDVFIHSFCKEGKISSAFRVLKDM 494

Query: 325 HSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQA 384
             KGC  T+ +YN LI G      + E   L  ++   GV   V  YN +LS L + G+ 
Sbjct: 495 EKKGCNKTLQTYNSLIMGLGSKNQIFEIYGLIDEMRERGVSPDVSIYNNVLSSLCEGGRV 554

Query: 385 GYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCL 444
             A  + DEM    + P++S+++ILI   CK  C   AV     + +N       +++  
Sbjct: 555 KDAPSVLDEMLQKGISPNISSFSILIKAFCKA-CDFSAVDEIFEIALNVCGHKEALYSLT 613

Query: 445 IDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGC 504
            + L   G +  A ELF     +        Y  +I  LC+  KL+ A+  L  +   G 
Sbjct: 614 FNELLVGGEVVKAKELFETALDRSFDVGNFLYKDLIDHLCKDEKLDDASGILHKLIDKGY 673

Query: 505 APNVVTFNTLMHGFLQNNKTSKVVELLHKMAE 536
             +  +F  ++ G  +     +  EL  KM E
Sbjct: 674 WFDPASFMPVIDGLGKRGNKHEADELAEKMME 705


>gi|125535814|gb|EAY82302.1| hypothetical protein OsI_37513 [Oryza sativa Indica Group]
          Length = 578

 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 135/430 (31%), Positives = 217/430 (50%), Gaps = 16/430 (3%)

Query: 61  YFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCF 120
           +     +H +  P  SS N L   +   +  D     +R  +   + PD  T N +I+  
Sbjct: 142 FLLAGESHPRHRPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVIS-- 199

Query: 121 GNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCR---TGNLSVALRLHKK 177
                GLC   ++++A  + K++ A+G+ P V TY +LI+G+C+    GN+     L K+
Sbjct: 200 -----GLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKE 254

Query: 178 MVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHG 237
           MV    E G IS T + ++ ++I+  CK      A  +F EMK +GI  +VV   +LI G
Sbjct: 255 MV----EAG-ISPTAV-TFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISG 308

Query: 238 FCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPD 297
            C  G  EE   L  EM DLG  PN +TF  ++   CK G + +AN  ++ M +R + PD
Sbjct: 309 LCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPD 368

Query: 298 RFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYR 357
              Y  L+DGY  +G+++ A  +  +M  KG    V +YN LI G+ +  +   A  L  
Sbjct: 369 VVIYTILIDGYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLD 428

Query: 358 QIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNN 417
           ++   G+   V+TYN L+  L   G+   A KL DEM    +EP+  TYN +I G C   
Sbjct: 429 EMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKG 488

Query: 418 CVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYS 477
            ++ A ++   +E  +    +  +N  I   C+ G++D A +L +++  K LVP  +TY 
Sbjct: 489 NIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYE 548

Query: 478 IMIHGLCRKG 487
            +  G+  KG
Sbjct: 549 TIKEGMMEKG 558



 Score =  211 bits (537), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 128/405 (31%), Positives = 206/405 (50%), Gaps = 9/405 (2%)

Query: 126 GLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYEN 185
           GL    R+  A   F++ +   V PD+ T+ T+I+G CR G L  A  + K + +     
Sbjct: 165 GLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDVAKDIKAW---- 220

Query: 186 GLISKTNIFSYSIIIDSLCKEGLVDK---AKELFLEMKGRGINPAVVVCTTLIHGFCCAG 242
           GL    ++ +Y+ +ID  CK+G          L  EM   GI+P  V    LI+G+C   
Sbjct: 221 GL--APSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNS 278

Query: 243 NWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYN 302
           N      +F EM   G   +++T+N +I  LC  GK+ E   L+E M   GL+P+  T+ 
Sbjct: 279 NTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFG 338

Query: 303 SLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISN 362
            ++ G+C  G +  A +    M  +  +  VV Y ILI+GY ++  +E+AM++   +   
Sbjct: 339 CVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYTILIDGYRRLGKMEDAMAVKEAMAKK 398

Query: 363 GVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEA 422
           G+   V TYN L++G  ++G    A  L DEMK   +E D+ TYN+LI  LC    V++A
Sbjct: 399 GISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKA 458

Query: 423 VKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHG 482
           VKL   +     E     +N +I G C  G + +A+E+  ++ +      VVTY++ I  
Sbjct: 459 VKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKY 518

Query: 483 LCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKV 527
            C+ GK+++AND L  M      PN +T+ T+  G ++   T  +
Sbjct: 519 FCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEGMMEKGYTPDI 563



 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 102/348 (29%), Positives = 172/348 (49%), Gaps = 3/348 (0%)

Query: 190 KTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNG 249
           + +  S + ++  L     VD A++ F     R ++P +    T+I G C  G   +   
Sbjct: 153 RPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGD 212

Query: 250 LFIEMLDLGPRPNLLTFNVMIDCLCK---GGKINEANGLLELMIQRGLNPDRFTYNSLMD 306
           +  ++   G  P++ T+N +ID  CK    G +   + LL+ M++ G++P   T+  L++
Sbjct: 213 VAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLIN 272

Query: 307 GYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQ 366
           GYC       A  +F  M  +G   +VV+YN LI+G C    VEE + L  ++   G+  
Sbjct: 273 GYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSP 332

Query: 367 TVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLF 426
             IT+  +L G  + G    A    D M   NVEPD+  Y ILIDG  +   +++A+ + 
Sbjct: 333 NEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYTILIDGYRRLGKMEDAMAVK 392

Query: 427 HMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRK 486
             +        +  +NCLI G  ++G   +A  L  ++ +KG+   VVTY+++I  LC K
Sbjct: 393 EAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCK 452

Query: 487 GKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKM 534
           G++ KA   L  M + G  PN +T+NT++ GF          E+  +M
Sbjct: 453 GEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRM 500



 Score =  168 bits (425), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 97/330 (29%), Positives = 165/330 (50%), Gaps = 5/330 (1%)

Query: 226 PAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGL 285
           P+      L+ G   A   +     F   L     P++ TFN +I  LC+ G++ +A  +
Sbjct: 154 PSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDV 213

Query: 286 LELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFL---SMHSKGCKHTVVSYNILING 342
            + +   GL P   TYNSL+DGYC  G       + +    M   G   T V++ +LING
Sbjct: 214 AKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLING 273

Query: 343 YCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPD 402
           YCK  N   A+ ++ ++   G+  +V+TYN+L+SGL   G+     KL +EM+   + P+
Sbjct: 274 YCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPN 333

Query: 403 LSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFH 462
             T+  ++ G CK   + +A      +     E  + I+  LIDG  + G++++A  +  
Sbjct: 334 EITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYTILIDGYRRLGKMEDAMAVKE 393

Query: 463 KLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNN 522
            + +KG+ P V TY+ +I G  R G    A+  L  M++ G   +VVT+N L+       
Sbjct: 394 AMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKG 453

Query: 523 KTSKVVELLHKMAEPERNLVPDDTTFSIVV 552
           +  K V+LL +M+E    L P+  T++ ++
Sbjct: 454 EVRKAVKLLDEMSEV--GLEPNHLTYNTII 481



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 98/336 (29%), Positives = 169/336 (50%), Gaps = 19/336 (5%)

Query: 50  KSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPD 109
           K G  N+         M     SP   +F +L     KN +  A +  + ++   G+   
Sbjct: 239 KGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAAS 298

Query: 110 FLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLS 169
            +T N LI+       GLC E +++E   L + M   G+ P+ IT+G ++ GFC+ G ++
Sbjct: 299 VVTYNSLIS-------GLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMA 351

Query: 170 VALRLHKKMVSGDYENGLISKT---NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINP 226
            A          D+ +G+  +    ++  Y+I+ID   + G ++ A  +   M  +GI+P
Sbjct: 352 DA---------NDWIDGMTERNVEPDVVIYTILIDGYRRLGKMEDAMAVKEAMAKKGISP 402

Query: 227 AVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLL 286
            V     LI GF  +G+W   +GL  EM + G   +++T+NV+I  LC  G++ +A  LL
Sbjct: 403 NVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLL 462

Query: 287 ELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKI 346
           + M + GL P+  TYN+++ G+C  G I +A EI   M     +  VV+YN+ I  +C+I
Sbjct: 463 DEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQI 522

Query: 347 LNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAG 382
             ++EA  L  +++   +    ITY T+  G+ + G
Sbjct: 523 GKMDEANDLLNEMLDKCLVPNGITYETIKEGMMEKG 558



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 87/299 (29%), Positives = 156/299 (52%), Gaps = 5/299 (1%)

Query: 260 RPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTARE 319
           RP+  + N ++  L    +++ A       ++R ++PD +T+N+++ G C +G++  A +
Sbjct: 153 RPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGD 212

Query: 320 IFLSMHSKGCKHTVVSYNILINGYCK---ILNVEEAMSLYRQIISNGVRQTVITYNTLLS 376
           +   + + G   +V +YN LI+GYCK     N+     L ++++  G+  T +T+  L++
Sbjct: 213 VAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLIN 272

Query: 377 GLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEF 436
           G  +      A ++F+EMK   +   + TYN LI GLC    V+E VKL   +E      
Sbjct: 273 GYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSP 332

Query: 437 GIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFL 496
               F C++ G CK G + +A +    + ++ + P VV Y+I+I G  R GK+E A    
Sbjct: 333 NEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYTILIDGYRRLGKMEDAMAVK 392

Query: 497 LYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLL 555
             M K G +PNV T+N L+ GF ++        LL +M   E+ +  D  T+++++  L
Sbjct: 393 EAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMK--EKGIEADVVTYNVLIGAL 449



 Score = 79.3 bits (194), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 48/167 (28%), Positives = 81/167 (48%), Gaps = 5/167 (2%)

Query: 400 EPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWE 459
            P  S+ N L+ GL     V  A K F      +    I  FN +I GLC+ G+L  A +
Sbjct: 153 RPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGD 212

Query: 460 LFHKLPQKGLVPTVVTYSIMIHGLCRK---GKLEKANDFLLYMEKNGCAPNVVTFNTLMH 516
           +   +   GL P+V TY+ +I G C+K   G +   +  L  M + G +P  VTF  L++
Sbjct: 213 VAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLIN 272

Query: 517 GFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
           G+ +N+ T+  V +  +M   ++ +     T++ ++  L  + K  E
Sbjct: 273 GYCKNSNTAAAVRVFEEMK--QQGIAASVVTYNSLISGLCSEGKVEE 317



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 44/188 (23%), Positives = 85/188 (45%), Gaps = 13/188 (6%)

Query: 72  SPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVEN 131
           SP ++++N L    +++  + +      ++   G+  D +T N+LI         LC + 
Sbjct: 401 SPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIG-------ALCCKG 453

Query: 132 RIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKT 191
            +++A  L   M   G+ P+ +TY T+I GFC  GN+  A  +  +M           + 
Sbjct: 454 EVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRM------EKCRKRA 507

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
           N+ +Y++ I   C+ G +D+A +L  EM  + + P  +   T+  G    G   ++ G  
Sbjct: 508 NVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEGMMEKGYTPDIRGCT 567

Query: 252 IEMLDLGP 259
           +      P
Sbjct: 568 VSQASENP 575


>gi|297733951|emb|CBI15198.3| unnamed protein product [Vitis vinifera]
          Length = 948

 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 130/399 (32%), Positives = 207/399 (51%), Gaps = 9/399 (2%)

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
           ++EA W++  M    V P +     +++G  + G      +++  MV+        +  N
Sbjct: 142 VEEALWVYYKM---DVLPAMQACNMVLDGLVKKGRFDTMWKVYGDMVARG------ASPN 192

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
           + +Y  +ID  C++G   KA  LF EM  + I P VV+ T LI G C      E   +F 
Sbjct: 193 VVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFR 252

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
            M + G  PNL T+N M+D  CK   + +A  L + M+  GL P+  T+  L+DG C   
Sbjct: 253 TMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTD 312

Query: 313 RIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYN 372
            + +AR+  + M S G    +  YN LI+GYCK  N+ EA+SL+ +I  + +   V TY+
Sbjct: 313 EMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYS 372

Query: 373 TLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMN 432
            L+ GL    +   A  L  EMK     P+  TYN LIDG CK   +++A+++   +   
Sbjct: 373 ILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEK 432

Query: 433 KFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKA 492
             E  I  F+ LIDG CKAG+++ A  L+ ++  KGL+P VV Y+ +I G  + G  ++A
Sbjct: 433 GIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEA 492

Query: 493 NDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELL 531
                 M++ G  PNV T + L+ G  ++ + S  ++L 
Sbjct: 493 FRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLF 531



 Score =  215 bits (547), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 128/393 (32%), Positives = 200/393 (50%), Gaps = 13/393 (3%)

Query: 69  MQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLC 128
           M   P + + N++   + K   +D +   Y  +V+ G  P+ +T   LI+       G C
Sbjct: 152 MDVLPAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLID-------GCC 204

Query: 129 VENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLI 188
            +    +A  LF  MI   + P V+ Y  LI G C    +S A  + + M      +G++
Sbjct: 205 RQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTM----RNSGML 260

Query: 189 SKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVN 248
              N+++Y+ ++D  CK   V KA EL+ EM G G+ P VV    LI G C         
Sbjct: 261 P--NLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSAR 318

Query: 249 GLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGY 308
              I+M   G  PN+  +N +ID  CK G ++EA  L   + +  + PD FTY+ L+ G 
Sbjct: 319 KFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGL 378

Query: 309 CLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTV 368
           C V R++ A  +   M  KG     V+YN LI+GYCK  N+E+A+ +  Q+   G+   +
Sbjct: 379 CGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNI 438

Query: 369 ITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHM 428
           IT++TL+ G  +AG+   A  L+ EM +  + PD+  Y  LIDG  K+   +EA +L   
Sbjct: 439 ITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKE 498

Query: 429 LEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELF 461
           ++       +   +CLIDGLCK GR+ +A +LF
Sbjct: 499 MQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLF 531



 Score =  214 bits (546), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 138/446 (30%), Positives = 227/446 (50%), Gaps = 19/446 (4%)

Query: 116 LINCFGNKERGLCVENRIKEATW-LFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRL 174
           LI C  N  R     +RI  + + +   + +    P+V  +G LI  F   G +  AL +
Sbjct: 96  LIQCLQNSRR-----SRICCSVFNVLSRLESSKFTPNV--FGVLIIAFSEMGLVEEALWV 148

Query: 175 HKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTL 234
           + KM   D    + +       ++++D L K+G  D   +++ +M  RG +P VV   TL
Sbjct: 149 YYKM---DVLPAMQA------CNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTL 199

Query: 235 IHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGL 294
           I G C  G++ +   LF EM++    P ++ + ++I  LC   +I+EA  +   M   G+
Sbjct: 200 IDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGM 259

Query: 295 NPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMS 354
            P+ +TYN++MDGYC +  +  A E++  M   G    VV++ ILI+G CK   +  A  
Sbjct: 260 LPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARK 319

Query: 355 LYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLC 414
               + S GV   +  YN L+ G  +AG    A  L  E++ + + PD+ TY+ILI GLC
Sbjct: 320 FLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLC 379

Query: 415 KNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVV 474
             + ++EA  L   ++   F      +N LIDG CK G ++ A E+  ++ +KG+ P ++
Sbjct: 380 GVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNII 439

Query: 475 TYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKM 534
           T+S +I G C+ GK+E A      M   G  P+VV +  L+ G  ++  T +   L  +M
Sbjct: 440 TFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEM 499

Query: 535 AEPERNLVPDDTTFSIVVDLLAKDEK 560
            E    L P+  T S ++D L KD +
Sbjct: 500 QEA--GLHPNVFTLSCLIDGLCKDGR 523



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 135/511 (26%), Positives = 229/511 (44%), Gaps = 68/511 (13%)

Query: 52  GIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFL 111
           G   ++EA   F  M +    P + ++N +     K  H    +  Y++++  GLLP+ +
Sbjct: 240 GESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLPNVV 299

Query: 112 TLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVA 171
           T  ILI+       GLC  + +  A     +M +FGV P++  Y  LI+G+C+ GNLS A
Sbjct: 300 TFGILID-------GLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEA 352

Query: 172 LRLHKK---------------MVSG-------DYENGLISKT-------NIFSYSIIIDS 202
           L LH +               ++ G       +  +GL+ +        N  +Y+ +ID 
Sbjct: 353 LSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDG 412

Query: 203 LCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPN 262
            CKEG ++KA E+  +M  +GI P ++  +TLI G+C AG  E   GL+ EM+  G  P+
Sbjct: 413 YCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPD 472

Query: 263 LLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFL 322
           ++ +  +ID   K G   EA  L + M + GL+P+ FT + L+DG C  GRI  A ++FL
Sbjct: 473 VVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFL 532

Query: 323 SMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQI---------------ISNGVRQT 367
           +    G   T    N L     ++ ++  A+SL+R I                +N  +  
Sbjct: 533 A--KTGTDTTGSKTNELDRSLYQMCSL--ALSLFRGISEPCICVIRVTKLFATNNQPKAH 588

Query: 368 VITY------NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILID-GLCKNNCVQ 420
           + T+      N  L    Q+        LF  + L      + +++++     C      
Sbjct: 589 LHTHLKPPKSNQTLKRYLQSSNTSKVL-LFFRILLRKNPSSIDSFSLMFALKACTLKSSL 647

Query: 421 EAVKLFHMLEMN-KFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIM 479
              K  H L +N  FE  I +   LI      G + +A  +F ++P K L    ++++ +
Sbjct: 648 VEGKQMHALVINFGFEPIIFLQTSLISMYSATGNVADAHNMFDEIPSKNL----ISWTSV 703

Query: 480 IHGLCRKGKLEKANDFLLYMEKNGCAPNVVT 510
           I       +  KA      M+ +   P++VT
Sbjct: 704 ISAYVDNQRPNKALQLFRQMQMDDVQPDIVT 734



 Score =  102 bits (253), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 123/498 (24%), Positives = 202/498 (40%), Gaps = 57/498 (11%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
           N  +   CK G  N+ +A      MT     P I +F+ L     K    +A +  Y ++
Sbjct: 407 NTLIDGYCKEG--NMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEM 464

Query: 102 VSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLING 161
           V  GLLPD +    LI+       G   +   KEA  L K M   G+ P+V T   LI+G
Sbjct: 465 VIKGLLPDVVAYTALID-------GHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDG 517

Query: 162 FCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGL------------V 209
            C+ G +S A++L       D      SKTN    S+    +C   L            V
Sbjct: 518 LCKDGRISDAIKLFLAKTGTDTTG---SKTNELDRSLY--QMCSLALSLFRGISEPCICV 572

Query: 210 DKAKELFLEMKGRGINPAVVVCTTL--------IHGFCCAGNWEEVNGLFIEMLDLGPRP 261
            +  +LF         P   + T L        +  +  + N  +V   F  +L   P  
Sbjct: 573 IRVTKLF----ATNNQPKAHLHTHLKPPKSNQTLKRYLQSSNTSKVLLFFRILLRKNP-S 627

Query: 262 NLLTFNVMID---CLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAR 318
           ++ +F++M     C  K   + E   +  L+I  G  P  F   SL+  Y   G +  A 
Sbjct: 628 SIDSFSLMFALKACTLKSSLV-EGKQMHALVINFGFEPIIFLQTSLISMYSATGNVADAH 686

Query: 319 EIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGL 378
            +F  + SK     ++S+  +I+ Y       +A+ L+RQ+  + V+  ++T    LS  
Sbjct: 687 NMFDEIPSK----NLISWTSVISAYVDNQRPNKALQLFRQMQMDDVQPDIVTVTVALSAC 742

Query: 379 FQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGI 438
              G     + +   ++   ++ DL   N LI+   K   +  A + F ++  N   F  
Sbjct: 743 ADLGALDMGEWIHAYIRHRGLDTDLCLNNSLINMYSKCGEIGTA-RRFSLVLPNDVTFMG 801

Query: 439 EIFNCLIDGLCKAGRLDNAWELFHKLPQK-GLVPTVVTYSIMIHGLCRKGKLEKANDFLL 497
            +  C   GL + G+     + F  + +   L P +  +  M+  LCR G L +A +F+L
Sbjct: 802 VLMACSHAGLVEEGK-----QHFRSMKEDYSLRPRISHFGCMVDLLCRAGLLTEAYEFIL 856

Query: 498 YMEKNGCAPNVVTFNTLM 515
            M      PN V + TL+
Sbjct: 857 KMP---VRPNAVVWRTLL 871



 Score = 46.6 bits (109), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 54/284 (19%), Positives = 115/284 (40%), Gaps = 21/284 (7%)

Query: 129 VENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLI 188
           +++ + E   +   +I FG  P +    +LI+ +  TGN++ A  +  +          I
Sbjct: 643 LKSSLVEGKQMHALVINFGFEPIIFLQTSLISMYSATGNVADAHNMFDE----------I 692

Query: 189 SKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVN 248
              N+ S++ +I +       +KA +LF +M+   + P +V  T  +      G  +   
Sbjct: 693 PSKNLISWTSVISAYVDNQRPNKALQLFRQMQMDDVQPDIVTVTVALSACADLGALDMGE 752

Query: 249 GLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGY 308
            +   +   G   +L   N +I+   K G+I  A     ++      P+  T+  ++   
Sbjct: 753 WIHAYIRHRGLDTDLCLNNSLINMYSKCGEIGTARRFSLVL------PNDVTFMGVLMAC 806

Query: 309 CLVGRIDTAREIFLSMHSK-GCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQT 367
              G ++  ++ F SM      +  +  +  +++  C+   + EA   Y  I+   VR  
Sbjct: 807 SHAGLVEEGKQHFRSMKEDYSLRPRISHFGCMVDLLCRAGLLTEA---YEFILKMPVRPN 863

Query: 368 VITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILID 411
            + + TLL      G       + +++K    +P  S+  + ID
Sbjct: 864 AVVWRTLLGACSLQGMWDKKMLVRNQIK-QRRDPGCSSIEVGID 906



 Score = 43.1 bits (100), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 40/205 (19%), Positives = 78/205 (38%), Gaps = 44/205 (21%)

Query: 71  PSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVE 130
           PS  + S+  +  A   N+  +  +  +R++    + PD +T+ + ++         C +
Sbjct: 693 PSKNLISWTSVISAYVDNQRPNKALQLFRQMQMDDVQPDIVTVTVALSA--------CAD 744

Query: 131 -NRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRL--------------- 174
              +    W+   +   G+  D+    +LIN + + G +  A R                
Sbjct: 745 LGALDMGEWIHAYIRHRGLDTDLCLNNSLINMYSKCGEIGTARRFSLVLPNDVTFMGVLM 804

Query: 175 -------------HKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKG 221
                        H + +  DY      +  I  +  ++D LC+ GL+ +A E  L+M  
Sbjct: 805 ACSHAGLVEEGKQHFRSMKEDYS----LRPRISHFGCMVDLLCRAGLLTEAYEFILKMPV 860

Query: 222 RGINPAVVVCTTLIHGFCCAGNWEE 246
           R   P  VV  TL+      G W++
Sbjct: 861 R---PNAVVWRTLLGACSLQGMWDK 882


>gi|356557251|ref|XP_003546931.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Glycine max]
          Length = 808

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 135/469 (28%), Positives = 238/469 (50%), Gaps = 37/469 (7%)

Query: 105 GLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCR 164
           G +P  +  N++I+       G C +  ++ AT   K +   GV P V TYG LINGFC+
Sbjct: 231 GCVPHVVFYNMIID-------GYCKKGDLQCATRTLKELKMKGVLPTVETYGALINGFCK 283

Query: 165 TGN---------------LSVALRLHKKMVSGDYENGLISKT--------------NIFS 195
            G                L++ +++   ++  +++ GL++K               +I +
Sbjct: 284 AGEFEAVDQLLTEMAARGLNMNVKVFNNVIDAEFKYGLVTKAAETMRRMAEMGCGPDITT 343

Query: 196 YSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEML 255
           Y+ +I+  CK G + +A E   + K RG+ P     T L+H +C  G++ +  G+   + 
Sbjct: 344 YNTMINFSCKGGRIKEADEFLEKAKERGLLPNKFSYTPLMHAYCKQGDYVKAAGMLFRIA 403

Query: 256 DLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRID 315
           ++G +P+L+++   I  +   G+I+ A  + E M+++G+ PD   YN LM G C  GR  
Sbjct: 404 EIGEKPDLVSYGAFIHGVVVHGEIDVALMVREKMMEKGVFPDAQIYNVLMSGLCKNGRFP 463

Query: 316 TAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLL 375
             + +   M  +  +  V  +  L++G+ +   ++EA+ +++ II  GV   ++ YN ++
Sbjct: 464 AMKLLLSEMLDRNVQPDVYVFATLMDGFIRNGELDEAIKIFKVIIRKGVDPGIVGYNAMI 523

Query: 376 SGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFE 435
            G  + G+   A    ++MK  +  PD  TY+ +IDG  K + +  A+K+F  +  +KF+
Sbjct: 524 KGFCKFGKMTDALSCLNKMKNVHHAPDEYTYSTVIDGYVKQHDMSSALKMFGQMMKHKFK 583

Query: 436 FGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDF 495
             +  +  LI+G CK   +  A ++F  +    LVP VVTY+ ++ G  + GK EKA   
Sbjct: 584 PNVITYTSLINGFCKKADMIRAEKVFRGMKSFDLVPNVVTYTTLVGGFFKAGKPEKATSI 643

Query: 496 LLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPD 544
              M  NGC PN  TF+ L++G L N  TS V+       E ER+L+ D
Sbjct: 644 FELMLMNGCPPNDATFHYLING-LTNTATSPVLIEEKDSMENERSLILD 691



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 144/518 (27%), Positives = 249/518 (48%), Gaps = 20/518 (3%)

Query: 55  NLNEARYFFGYMTHMQPS-PPISSFNLLFGAVAKNRHYDAVISFYRKLVSI----GLLPD 109
           +L+ A   F  +  M    P + + N L   + K+   D  +  Y K++      G + D
Sbjct: 141 SLDRALQLFHTVREMHNCLPTVVASNSLLNGLVKSGKVDVALQLYDKMLQTDDGTGAVVD 200

Query: 110 FLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLS 169
             T +I++       +GLC   +I+E   L K+    G  P V+ Y  +I+G+C+ G+L 
Sbjct: 201 NYTTSIVV-------KGLCNLGKIEEGRRLVKDRWGKGCVPHVVFYNMIIDGYCKKGDLQ 253

Query: 170 VALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVV 229
            A R  K++       G++    + +Y  +I+  CK G  +   +L  EM  RG+N  V 
Sbjct: 254 CATRTLKELKM----KGVLP--TVETYGALINGFCKAGEFEAVDQLLTEMAARGLNMNVK 307

Query: 230 VCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELM 289
           V   +I      G   +       M ++G  P++ T+N MI+  CKGG+I EA+  LE  
Sbjct: 308 VFNNVIDAEFKYGLVTKAAETMRRMAEMGCGPDITTYNTMINFSCKGGRIKEADEFLEKA 367

Query: 290 IQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNV 349
            +RGL P++F+Y  LM  YC  G    A  +   +   G K  +VSY   I+G      +
Sbjct: 368 KERGLLPNKFSYTPLMHAYCKQGDYVKAAGMLFRIAEIGEKPDLVSYGAFIHGVVVHGEI 427

Query: 350 EEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNIL 409
           + A+ +  +++  GV      YN L+SGL + G+    + L  EM   NV+PD+  +  L
Sbjct: 428 DVALMVREKMMEKGVFPDAQIYNVLMSGLCKNGRFPAMKLLLSEMLDRNVQPDVYVFATL 487

Query: 410 IDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGL 469
           +DG  +N  + EA+K+F ++     + GI  +N +I G CK G++ +A    +K+     
Sbjct: 488 MDGFIRNGELDEAIKIFKVIIRKGVDPGIVGYNAMIKGFCKFGKMTDALSCLNKMKNVHH 547

Query: 470 VPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVE 529
            P   TYS +I G  ++  +  A      M K+   PNV+T+ +L++GF +     +  +
Sbjct: 548 APDEYTYSTVIDGYVKQHDMSSALKMFGQMMKHKFKPNVITYTSLINGFCKKADMIRAEK 607

Query: 530 LLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAV 567
           +   M     +LVP+  T++ +V    K  K  + +++
Sbjct: 608 VFRGMK--SFDLVPNVVTYTTLVGGFFKAGKPEKATSI 643



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 137/488 (28%), Positives = 233/488 (47%), Gaps = 27/488 (5%)

Query: 66  MTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKER 125
           M  M   P I+++N +     K         F  K    GLLP+  +   L++ +  +  
Sbjct: 332 MAEMGCGPDITTYNTMINFSCKGGRIKEADEFLEKAKERGLLPNKFSYTPLMHAYCKQG- 390

Query: 126 GLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYEN 185
                + +K A  LF+ +   G +PD+++YG  I+G    G + VAL + +KM+    E 
Sbjct: 391 -----DYVKAAGMLFR-IAEIGEKPDLVSYGAFIHGVVVHGEIDVALMVREKMM----EK 440

Query: 186 GLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWE 245
           G+     I  Y++++  LCK G     K L  EM  R + P V V  TL+ GF   G  +
Sbjct: 441 GVFPDAQI--YNVLMSGLCKNGRFPAMKLLLSEMLDRNVQPDVYVFATLMDGFIRNGELD 498

Query: 246 EVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLM 305
           E   +F  ++  G  P ++ +N MI   CK GK+ +A   L  M      PD +TY++++
Sbjct: 499 EAIKIFKVIIRKGVDPGIVGYNAMIKGFCKFGKMTDALSCLNKMKNVHHAPDEYTYSTVI 558

Query: 306 DGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVR 365
           DGY     + +A ++F  M     K  V++Y  LING+CK  ++  A  ++R + S  + 
Sbjct: 559 DGYVKQHDMSSALKMFGQMMKHKFKPNVITYTSLINGFCKKADMIRAEKVFRGMKSFDLV 618

Query: 366 QTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLC----------- 414
             V+TY TL+ G F+AG+   A  +F+ M +    P+ +T++ LI+GL            
Sbjct: 619 PNVVTYTTLVGGFFKAGKPEKATSIFELMLMNGCPPNDATFHYLINGLTNTATSPVLIEE 678

Query: 415 KNNCVQEA---VKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVP 471
           K++   E    +  F M+    ++  I  +N +I  LCK G +D A  L  K+  KG + 
Sbjct: 679 KDSMENERSLILDFFTMMLSEGWDQVIAAYNSVIVCLCKHGMVDTAQLLLTKMLTKGFLI 738

Query: 472 TVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELL 531
             V ++ M+HGLC KGK ++  + +            V ++  +  +L   + S+   +L
Sbjct: 739 DSVCFTAMLHGLCHKGKSKEWRNIISCDLNKIELQTAVKYSLTLDKYLYQGRLSEASVIL 798

Query: 532 HKMAEPER 539
             + E +R
Sbjct: 799 QTLIEEDR 806



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 72/282 (25%), Positives = 133/282 (47%), Gaps = 5/282 (1%)

Query: 260 RPNLLTFNVMIDCLCKGGKINEANGLLELMIQ-RGLNPDRFTYNSLMDGYCLVGRIDTAR 318
           +P    F+ +I    + G ++ A  L   + +     P     NSL++G    G++D A 
Sbjct: 123 KPTREAFSALILAYGESGSLDRALQLFHTVREMHNCLPTVVASNSLLNGLVKSGKVDVAL 182

Query: 319 EIFLSM--HSKGCKHTVVSY--NILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTL 374
           +++  M     G    V +Y  +I++ G C +  +EE   L +     G    V+ YN +
Sbjct: 183 QLYDKMLQTDDGTGAVVDNYTTSIVVKGLCNLGKIEEGRRLVKDRWGKGCVPHVVFYNMI 242

Query: 375 LSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKF 434
           + G  + G    A +   E+K+  V P + TY  LI+G CK    +   +L   +     
Sbjct: 243 IDGYCKKGDLQCATRTLKELKMKGVLPTVETYGALINGFCKAGEFEAVDQLLTEMAARGL 302

Query: 435 EFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKAND 494
              +++FN +ID   K G +  A E   ++ + G  P + TY+ MI+  C+ G++++A++
Sbjct: 303 NMNVKVFNNVIDAEFKYGLVTKAAETMRRMAEMGCGPDITTYNTMINFSCKGGRIKEADE 362

Query: 495 FLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAE 536
           FL   ++ G  PN  ++  LMH + +     K   +L ++AE
Sbjct: 363 FLEKAKERGLLPNKFSYTPLMHAYCKQGDYVKAAGMLFRIAE 404



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 86/374 (22%), Positives = 151/374 (40%), Gaps = 65/374 (17%)

Query: 37  PETQL-NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVI 95
           P+ Q+ N  +   CK+G       +     M      P +  F  L     +N   D  I
Sbjct: 444 PDAQIYNVLMSGLCKNG--RFPAMKLLLSEMLDRNVQPDVYVFATLMDGFIRNGELDEAI 501

Query: 96  SFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITY 155
             ++ ++  G+ P  +  N +I       +G C   ++ +A      M      PD  TY
Sbjct: 502 KIFKVIIRKGVDPGIVGYNAMI-------KGFCKFGKMTDALSCLNKMKNVHHAPDEYTY 554

Query: 156 GTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKEL 215
            T+I+G+ +  ++S AL++  +M+   +      K N+ +Y+ +I+  CK+  + +A+++
Sbjct: 555 STVIDGYVKQHDMSSALKMFGQMMKHKF------KPNVITYTSLINGFCKKADMIRAEKV 608

Query: 216 FLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMID---- 271
           F  MK   + P VV  TTL+ GF  AG  E+   +F  ML  G  PN  TF+ +I+    
Sbjct: 609 FRGMKSFDLVPNVVTYTTLVGGFFKAGKPEKATSIFELMLMNGCPPNDATFHYLINGLTN 668

Query: 272 ---------------------------------------------CLCKGGKINEANGLL 286
                                                        CLCK G ++ A  LL
Sbjct: 669 TATSPVLIEEKDSMENERSLILDFFTMMLSEGWDQVIAAYNSVIVCLCKHGMVDTAQLLL 728

Query: 287 ELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKI 346
             M+ +G   D   + +++ G C  G+    R I     +K    T V Y++ ++ Y   
Sbjct: 729 TKMLTKGFLIDSVCFTAMLHGLCHKGKSKEWRNIISCDLNKIELQTAVKYSLTLDKYLYQ 788

Query: 347 LNVEEAMSLYRQII 360
             + EA  + + +I
Sbjct: 789 GRLSEASVILQTLI 802



 Score = 45.1 bits (105), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 40/154 (25%), Positives = 71/154 (46%), Gaps = 13/154 (8%)

Query: 441 FNCLIDGLCKAG--RLDNAWELF-------HKLPQKGLVPTVVTYSIMIHGLCRKGKLEK 491
           F+C +DG+  +   +L  ++ +F         +  + L PT   +S +I      G L++
Sbjct: 85  FSCSLDGVAHSSLLKLLASFRVFPEIELVLENMKAQHLKPTREAFSALILAYGESGSLDR 144

Query: 492 A-NDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPE--RNLVPDDTTF 548
           A   F    E + C P VV  N+L++G +++ K    ++L  KM + +     V D+ T 
Sbjct: 145 ALQLFHTVREMHNCLPTVVASNSLLNGLVKSGKVDVALQLYDKMLQTDDGTGAVVDNYTT 204

Query: 549 SIVVDLLAKDEKYHECSAVSKSSY-RACLYVTIF 581
           SIVV  L    K  E   + K  + + C+   +F
Sbjct: 205 SIVVKGLCNLGKIEEGRRLVKDRWGKGCVPHVVF 238


>gi|357115347|ref|XP_003559450.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
           chloroplastic-like [Brachypodium distachyon]
          Length = 1102

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 135/488 (27%), Positives = 254/488 (52%), Gaps = 16/488 (3%)

Query: 77  SFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEA 136
           ++N L   + K+ +    +  Y+ + + G++P   T ++L+  FG ++        ++  
Sbjct: 184 TYNGLIYFLVKSGYDREAMEVYKVMATDGIVPSVRTYSVLMLAFGKRD--------VETV 235

Query: 137 TWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSY 196
            WL + M   GV+P+V +Y   I    + G    A ++ +KM     + G   K ++ + 
Sbjct: 236 VWLLREMEDHGVKPNVYSYTICIRVLGQAGRFEEAYKILQKM----EDEG--CKPDVVTN 289

Query: 197 SIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLD 256
           +++I  LC  G V  AK++F +MK     P  V   TL+      G+   V  ++  M  
Sbjct: 290 TVLIQILCDAGRVSDAKDVFWKMKASDQKPDRVTYITLLDKCGDNGDSRSVIEIWNAMKA 349

Query: 257 LGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDT 316
            G   N++ +  ++D LC+ G+++EA+ + + M Q+G+ P +++YNSL+ G+    R++ 
Sbjct: 350 DGYNDNVVAYTAVVDALCQVGRVDEASDVFDQMKQKGIEPQQYSYNSLISGFLKADRLNH 409

Query: 317 AREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLS 376
           A E+F  M+  G      +Y + IN Y K     +A+  Y  + S G+   V+  N +L 
Sbjct: 410 ALELFNHMNIHGPTPNGYTYVLFINYYGKSGESLKAIKRYELMKSKGIVPDVVAGNAVLY 469

Query: 377 GLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEF 436
            L ++G+ G A+++F E+K   V PD  TY ++I    K +   EA+K+F  +   +   
Sbjct: 470 SLAKSGRLGMAKRVFHELKSIGVCPDNITYTMMIKCCSKASNADEAMKVFSEMIETRCVP 529

Query: 437 GIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFL 496
            +   N LID L KAGR + AW++FH+L +  L PT  TY+ ++ GL R+GK+++    L
Sbjct: 530 DVLAVNSLIDTLYKAGRGNEAWKIFHELKEMNLDPTDCTYNTLLAGLGREGKVKEVMHLL 589

Query: 497 LYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLA 556
             M  N   PN++T+NT++    +N + +  + +L+ M    +  +PD ++++  +  L 
Sbjct: 590 EEMNSNSYPPNLITYNTVLDCLCKNGEVNYALGMLYNMT--MKGCMPDLSSYNTALHGLV 647

Query: 557 KDEKYHEC 564
           K+++  E 
Sbjct: 648 KEDRLTEA 655



 Score =  208 bits (529), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 144/507 (28%), Positives = 242/507 (47%), Gaps = 36/507 (7%)

Query: 57   NEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNIL 116
            NEA   F  +  M   P   ++N L   + +      V+    ++ S    P+ +T N +
Sbjct: 548  NEAWKIFHELKEMNLDPTDCTYNTLLAGLGREGKVKEVMHLLEEMNSNSYPPNLITYNTV 607

Query: 117  INCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLH- 175
            ++C       LC    +  A  +  NM   G  PD+ +Y T ++G  +   L+ A R+  
Sbjct: 608  LDC-------LCKNGEVNYALGMLYNMTMKGCMPDLSSYNTALHGLVKEDRLTEAFRIFC 660

Query: 176  --KKMVSGDY-----------ENGLI---------------SKTNIFSYSIIIDSLCKEG 207
              KK+++ DY           +NGL+               SK +  S+  +++ + K  
Sbjct: 661  QMKKVLAPDYTTLCTILPSFVKNGLMNEALHTLKEYILQPGSKADRSSFHSLMEGILKRA 720

Query: 208  LVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFN 267
             ++K+ E    +    I       + LI   C +    E + L  +   LG      ++N
Sbjct: 721  GMEKSIEFAENIALSRILLDDFFLSPLIRHLCKSKKALEAHELVKKFESLGVSLKTGSYN 780

Query: 268  VMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSK 327
             +I  L     I+ A GL   M + G +PD FTYN ++D      RI+   ++   MH K
Sbjct: 781  ALICGLVDENLIDVAEGLFSEMKRLGCDPDEFTYNLILDAMGKSMRIEDMLKVQKEMHCK 840

Query: 328  GCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYA 387
            G + T V+YN +I+G  K   + EAM LY +++S G   T  TY  LL GL + G+   A
Sbjct: 841  GYESTYVTYNTIISGLVKSKMLYEAMDLYYKLMSEGFSPTPCTYGPLLDGLLKDGKIEDA 900

Query: 388  QKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDG 447
            + LFDEM  Y  +P+ + YNIL++G       ++  +LF  +        I+ +  LI  
Sbjct: 901  EDLFDEMLDYGCKPNRAIYNILLNGYRLAGNTEKVCELFQNMVDQGINPDIKSYTVLIGA 960

Query: 448  LCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPN 507
            LC AGRL+++   F +L + GL P ++TY+++IHGL R G+LE+A      MEK+G APN
Sbjct: 961  LCTAGRLNDSLSYFRQLTELGLEPDLITYNLLIHGLGRSGRLEEAVSLFNDMEKSGIAPN 1020

Query: 508  VVTFNTLMHGFLQNNKTSKVVELLHKM 534
            + T+N+L+    +  K ++  ++  ++
Sbjct: 1021 LYTYNSLILYLGKEGKAAEAGKMYEEL 1047



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 129/464 (27%), Positives = 230/464 (49%), Gaps = 17/464 (3%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
           P + S+ +    + +   ++      +K+   G  PD +T  +LI         LC   R
Sbjct: 249 PNVYSYTICIRVLGQAGRFEEAYKILQKMEDEGCKPDVVTNTVLIQI-------LCDAGR 301

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
           + +A  +F  M A   +PD +TY TL++     G+    + +   M +  Y +      N
Sbjct: 302 VSDAKDVFWKMKASDQKPDRVTYITLLDKCGDNGDSRSVIEIWNAMKADGYND------N 355

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
           + +Y+ ++D+LC+ G VD+A ++F +MK +GI P      +LI GF  A        LF 
Sbjct: 356 VVAYTAVVDALCQVGRVDEASDVFDQMKQKGIEPQQYSYNSLISGFLKADRLNHALELFN 415

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
            M   GP PN  T+ + I+   K G+  +A    ELM  +G+ PD    N+++      G
Sbjct: 416 HMNIHGPTPNGYTYVLFINYYGKSGESLKAIKRYELMKSKGIVPDVVAGNAVLYSLAKSG 475

Query: 313 RIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYN 372
           R+  A+ +F  + S G     ++Y ++I    K  N +EAM ++ ++I       V+  N
Sbjct: 476 RLGMAKRVFHELKSIGVCPDNITYTMMIKCCSKASNADEAMKVFSEMIETRCVPDVLAVN 535

Query: 373 TLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMN 432
           +L+  L++AG+   A K+F E+K  N++P   TYN L+ GL +   V+E + L   +  N
Sbjct: 536 SLIDTLYKAGRGNEAWKIFHELKEMNLDPTDCTYNTLLAGLGREGKVKEVMHLLEEMNSN 595

Query: 433 KFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKA 492
            +   +  +N ++D LCK G ++ A  + + +  KG +P + +Y+  +HGL ++ +L +A
Sbjct: 596 SYPPNLITYNTVLDCLCKNGEVNYALGMLYNMTMKGCMPDLSSYNTALHGLVKEDRLTEA 655

Query: 493 NDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAE 536
                 M+K   AP+  T  T++  F++N   +   E LH + E
Sbjct: 656 FRIFCQMKKV-LAPDYTTLCTILPSFVKNGLMN---EALHTLKE 695



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 147/547 (26%), Positives = 253/547 (46%), Gaps = 27/547 (4%)

Query: 12  SSETVSKVKLSSLFKSPRQIAAVSSPETQLNEFLHENCKSGIINLNEARYFFGYMTHMQP 71
           S E++  +K   L KS   +  V +     N  L+   KSG   L  A+  F  +  +  
Sbjct: 439 SGESLKAIKRYELMKSKGIVPDVVAG----NAVLYSLAKSG--RLGMAKRVFHELKSIGV 492

Query: 72  SPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVEN 131
            P   ++ ++    +K  + D  +  + +++    +PD L +N LI+      RG     
Sbjct: 493 CPDNITYTMMIKCCSKASNADEAMKVFSEMIETRCVPDVLAVNSLIDTLYKAGRG----- 547

Query: 132 RIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKT 191
              EA  +F  +    + P   TY TL+ G  R G +   + L ++M S  Y        
Sbjct: 548 --NEAWKIFHELKEMNLDPTDCTYNTLLAGLGREGKVKEVMHLLEEMNSNSY------PP 599

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
           N+ +Y+ ++D LCK G V+ A  +   M  +G  P +    T +HG        E   +F
Sbjct: 600 NLITYNTVLDCLCKNGEVNYALGMLYNMTMKGCMPDLSSYNTALHGLVKEDRLTEAFRIF 659

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEA-NGLLELMIQRGLNPDRFTYNSLMDGYCL 310
            +M  +   P+  T   ++    K G +NEA + L E ++Q G   DR +++SLM+G  +
Sbjct: 660 CQMKKV-LAPDYTTLCTILPSFVKNGLMNEALHTLKEYILQPGSKADRSSFHSLMEG--I 716

Query: 311 VGRIDTAREIFLSMHSKGCKHTVVSY--NILINGYCKILNVEEAMSLYRQIISNGVRQTV 368
           + R    + I  + +    +  +  +  + LI   CK     EA  L ++  S GV    
Sbjct: 717 LKRAGMEKSIEFAENIALSRILLDDFFLSPLIRHLCKSKKALEAHELVKKFESLGVSLKT 776

Query: 369 ITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHM 428
            +YN L+ GL        A+ LF EMK    +PD  TYN+++D + K+  +++ +K+   
Sbjct: 777 GSYNALICGLVDENLIDVAEGLFSEMKRLGCDPDEFTYNLILDAMGKSMRIEDMLKVQKE 836

Query: 429 LEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGK 488
           +    +E     +N +I GL K+  L  A +L++KL  +G  PT  TY  ++ GL + GK
Sbjct: 837 MHCKGYESTYVTYNTIISGLVKSKMLYEAMDLYYKLMSEGFSPTPCTYGPLLDGLLKDGK 896

Query: 489 LEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTF 548
           +E A D    M   GC PN   +N L++G+     T KV EL   M   ++ + PD  ++
Sbjct: 897 IEDAEDLFDEMLDYGCKPNRAIYNILLNGYRLAGNTEKVCELFQNMV--DQGINPDIKSY 954

Query: 549 SIVVDLL 555
           ++++  L
Sbjct: 955 TVLIGAL 961



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 132/463 (28%), Positives = 216/463 (46%), Gaps = 17/463 (3%)

Query: 16   VSKVKLSSLFKSPRQIAAVSSPE-TQLNEFLHENCKSGIINLNEARYFFG-YMTHMQPSP 73
            V + +L+  F+   Q+  V +P+ T L   L    K+G+  +NEA +    Y+       
Sbjct: 647  VKEDRLTEAFRIFCQMKKVLAPDYTTLCTILPSFVKNGL--MNEALHTLKEYILQPGSKA 704

Query: 74   PISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRI 133
              SSF+ L   + K    +  I F   +    +L D   L+ LI       R LC   + 
Sbjct: 705  DRSSFHSLMEGILKRAGMEKSIEFAENIALSRILLDDFFLSPLI-------RHLCKSKKA 757

Query: 134  KEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNI 193
             EA  L K   + GV     +Y  LI G      + VA  L  +M        L    + 
Sbjct: 758  LEAHELVKKFESLGVSLKTGSYNALICGLVDENLIDVAEGLFSEM------KRLGCDPDE 811

Query: 194  FSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIE 253
            F+Y++I+D++ K   ++   ++  EM  +G     V   T+I G   +    E   L+ +
Sbjct: 812  FTYNLILDAMGKSMRIEDMLKVQKEMHCKGYESTYVTYNTIISGLVKSKMLYEAMDLYYK 871

Query: 254  MLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGR 313
            ++  G  P   T+  ++D L K GKI +A  L + M+  G  P+R  YN L++GY L G 
Sbjct: 872  LMSEGFSPTPCTYGPLLDGLLKDGKIEDAEDLFDEMLDYGCKPNRAIYNILLNGYRLAGN 931

Query: 314  IDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNT 373
             +   E+F +M  +G    + SY +LI   C    + +++S +RQ+   G+   +ITYN 
Sbjct: 932  TEKVCELFQNMVDQGINPDIKSYTVLIGALCTAGRLNDSLSYFRQLTELGLEPDLITYNL 991

Query: 374  LLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNK 433
            L+ GL ++G+   A  LF++M+   + P+L TYN LI  L K     EA K++  L  N 
Sbjct: 992  LIHGLGRSGRLEEAVSLFNDMEKSGIAPNLYTYNSLILYLGKEGKAAEAGKMYEELLKNG 1051

Query: 434  FEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTY 476
            ++  +  +N LI G   +G  DNA+  + ++   G  P   TY
Sbjct: 1052 WKPNVFTYNALIGGYSVSGSTDNAFASYGQMIVGGCPPNSSTY 1094



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 140/504 (27%), Positives = 225/504 (44%), Gaps = 46/504 (9%)

Query: 49   CKSGIINLNEARYFFGYMTHMQPS---PPISSFNL-LFGAVAKNRHYDAVISFYRKLVSI 104
            CK+G +N     Y  G + +M      P +SS+N  L G V ++R  +A   F +  +  
Sbjct: 612  CKNGEVN-----YALGMLYNMTMKGCMPDLSSYNTALHGLVKEDRLTEAFRIFCQ--MKK 664

Query: 105  GLLPDFLTLNILINCF--------------------GNKE---------RGLCVENRIKE 135
             L PD+ TL  ++  F                    G+K           G+     +++
Sbjct: 665  VLAPDYTTLCTILPSFVKNGLMNEALHTLKEYILQPGSKADRSSFHSLMEGILKRAGMEK 724

Query: 136  ATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFS 195
            +    +N+    +  D      LI   C++     A  L KK  S     G+  KT   S
Sbjct: 725  SIEFAENIALSRILLDDFFLSPLIRHLCKSKKALEAHELVKKFES----LGVSLKTG--S 778

Query: 196  YSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEML 255
            Y+ +I  L  E L+D A+ LF EMK  G +P       ++     +   E++  +  EM 
Sbjct: 779  YNALICGLVDENLIDVAEGLFSEMKRLGCDPDEFTYNLILDAMGKSMRIEDMLKVQKEMH 838

Query: 256  DLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRID 315
              G     +T+N +I  L K   + EA  L   ++  G +P   TY  L+DG    G+I+
Sbjct: 839  CKGYESTYVTYNTIISGLVKSKMLYEAMDLYYKLMSEGFSPTPCTYGPLLDGLLKDGKIE 898

Query: 316  TAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLL 375
             A ++F  M   GCK     YNIL+NGY    N E+   L++ ++  G+   + +Y  L+
Sbjct: 899  DAEDLFDEMLDYGCKPNRAIYNILLNGYRLAGNTEKVCELFQNMVDQGINPDIKSYTVLI 958

Query: 376  SGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFE 435
              L  AG+   +   F ++    +EPDL TYN+LI GL ++  ++EAV LF+ +E +   
Sbjct: 959  GALCTAGRLNDSLSYFRQLTELGLEPDLITYNLLIHGLGRSGRLEEAVSLFNDMEKSGIA 1018

Query: 436  FGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDF 495
              +  +N LI  L K G+   A +++ +L + G  P V TY+ +I G    G  + A   
Sbjct: 1019 PNLYTYNSLILYLGKEGKAAEAGKMYEELLKNGWKPNVFTYNALIGGYSVSGSTDNAFAS 1078

Query: 496  LLYMEKNGCAPNVVTFNTLMHGFL 519
               M   GC PN  T+  L +  L
Sbjct: 1079 YGQMIVGGCPPNSSTYMQLPNQLL 1102



 Score =  119 bits (298), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 90/370 (24%), Positives = 170/370 (45%), Gaps = 14/370 (3%)

Query: 207 GLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTF 266
           G V    ++F  M+ + +   V    T+       G           M + G   N  T+
Sbjct: 126 GRVRDMAQVFDLMQRQIVKANVGTFLTIFRSLGMEGGLRSAPVALPMMKEAGIVLNSYTY 185

Query: 267 NVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFL--SM 324
           N +I  L K G   EA  + ++M   G+ P   TY+ LM  +   G+ D    ++L   M
Sbjct: 186 NGLIYFLVKSGYDREAMEVYKVMATDGIVPSVRTYSVLMLAF---GKRDVETVVWLLREM 242

Query: 325 HSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQA 384
              G K  V SY I I    +    EEA  + +++   G +  V+T   L+  L  AG+ 
Sbjct: 243 EDHGVKPNVYSYTICIRVLGQAGRFEEAYKILQKMEDEGCKPDVVTNTVLIQILCDAGRV 302

Query: 385 GYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCL 444
             A+ +F +MK  + +PD  TY  L+D    N   +  +++++ ++ + +   +  +  +
Sbjct: 303 SDAKDVFWKMKASDQKPDRVTYITLLDKCGDNGDSRSVIEIWNAMKADGYNDNVVAYTAV 362

Query: 445 IDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGC 504
           +D LC+ GR+D A ++F ++ QKG+ P   +Y+ +I G  +  +L  A +   +M  +G 
Sbjct: 363 VDALCQVGRVDEASDVFDQMKQKGIEPQQYSYNSLISGFLKADRLNHALELFNHMNIHGP 422

Query: 505 APNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEK---- 560
            PN  T+   ++ + ++ ++ K ++    M    + +VPD    + V+  LAK  +    
Sbjct: 423 TPNGYTYVLFINYYGKSGESLKAIKRYELMK--SKGIVPDVVAGNAVLYSLAKSGRLGMA 480

Query: 561 ---YHECSAV 567
              +HE  ++
Sbjct: 481 KRVFHELKSI 490



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 68/303 (22%), Positives = 134/303 (44%), Gaps = 36/303 (11%)

Query: 267 NVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHS 326
           N M++ +   G++ +   + +LM ++ +  +  T+ ++     + G + +A      M  
Sbjct: 116 NYMLELMRAHGRVRDMAQVFDLMQRQIVKANVGTFLTIFRSLGMEGGLRSAPVALPMMKE 175

Query: 327 KGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGY 386
            G      +YN LI    K     EAM +Y+ + ++G+  +V TY+ L+   F       
Sbjct: 176 AGIVLNSYTYNGLIYFLVKSGYDREAMEVYKVMATDGIVPSVRTYSVLMLA-FGKRDVET 234

Query: 387 AQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLID 446
              L  EM+ + V+P++ +Y I I  L +    +EA K+   +E    +  +     LI 
Sbjct: 235 VVWLLREMEDHGVKPNVYSYTICIRVLGQAGRFEEAYKILQKMEDEGCKPDVVTNTVLIQ 294

Query: 447 GLCKAGRLDNAWELFHKLPQKGLVP----------------------------------- 471
            LC AGR+ +A ++F K+      P                                   
Sbjct: 295 ILCDAGRVSDAKDVFWKMKASDQKPDRVTYITLLDKCGDNGDSRSVIEIWNAMKADGYND 354

Query: 472 TVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELL 531
            VV Y+ ++  LC+ G++++A+D    M++ G  P   ++N+L+ GFL+ ++ +  +EL 
Sbjct: 355 NVVAYTAVVDALCQVGRVDEASDVFDQMKQKGIEPQQYSYNSLISGFLKADRLNHALELF 414

Query: 532 HKM 534
           + M
Sbjct: 415 NHM 417



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 53/238 (22%), Positives = 97/238 (40%), Gaps = 37/238 (15%)

Query: 351 EAMSLYRQIISNG-VRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNIL 409
           EA+ L++ +     +  T  + N +L  +   G+     ++FD M+   V+ ++ T+  +
Sbjct: 94  EALQLFKSVAQQPRIVHTTESCNYMLELMRAHGRVRDMAQVFDLMQRQIVKANVGTFLTI 153

Query: 410 IDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGL 469
              L     ++ A     M++          +N LI  L K+G    A E++  +   G+
Sbjct: 154 FRSLGMEGGLRSAPVALPMMKEAGIVLNSYTYNGLIYFLVKSGYDREAMEVYKVMATDGI 213

Query: 470 VPTVVTYSIMI--------------------HG--------------LCRKGKLEKANDF 495
           VP+V TYS+++                    HG              L + G+ E+A   
Sbjct: 214 VPSVRTYSVLMLAFGKRDVETVVWLLREMEDHGVKPNVYSYTICIRVLGQAGRFEEAYKI 273

Query: 496 LLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
           L  ME  GC P+VVT   L+       + S   ++  KM   ++   PD  T+  ++D
Sbjct: 274 LQKMEDEGCKPDVVTNTVLIQILCDAGRVSDAKDVFWKMKASDQK--PDRVTYITLLD 329



 Score = 44.7 bits (104), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 33/161 (20%), Positives = 77/161 (47%), Gaps = 3/161 (1%)

Query: 407 NILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQ 466
           N +++ +  +  V++  ++F +++    +  +  F  +   L   G L +A      + +
Sbjct: 116 NYMLELMRAHGRVRDMAQVFDLMQRQIVKANVGTFLTIFRSLGMEGGLRSAPVALPMMKE 175

Query: 467 KGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSK 526
            G+V    TY+ +I+ L + G   +A +    M  +G  P+V T++ LM  F + +    
Sbjct: 176 AGIVLNSYTYNGLIYFLVKSGYDREAMEVYKVMATDGIVPSVRTYSVLMLAFGKRD-VET 234

Query: 527 VVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAV 567
           VV LL +M   +  + P+  +++I + +L +  ++ E   +
Sbjct: 235 VVWLLREME--DHGVKPNVYSYTICIRVLGQAGRFEEAYKI 273


>gi|296086456|emb|CBI32045.3| unnamed protein product [Vitis vinifera]
          Length = 648

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 131/414 (31%), Positives = 209/414 (50%), Gaps = 14/414 (3%)

Query: 127 LCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRL----HKKMVSGD 182
           LC   ++ EA  + + MI+ G+ PD + Y TLI+GFC+ GN+S A RL     K+ +S D
Sbjct: 233 LCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPD 292

Query: 183 YENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAG 242
           +           +Y+ +I  LC+ G V +A +LF EM  + + P  V  T LI G+C  G
Sbjct: 293 F----------ITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEG 342

Query: 243 NWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYN 302
             +E   L  +ML +G  PN++T+  + D LCK G+++ AN LL  M ++GL  + +TYN
Sbjct: 343 KMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYN 402

Query: 303 SLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISN 362
           SL++G C  G ID A ++   M   G     V+Y  L++ YCK   +  A  L RQ++  
Sbjct: 403 SLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDR 462

Query: 363 GVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEA 422
            ++ TV+T+N L++G   +G     +KL   M    + P+ +TYN LI   C  N ++  
Sbjct: 463 ELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRAT 522

Query: 423 VKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHG 482
            +++  +           +N LI G CKA  +  AW L   +  KG   TV +Y+ +I G
Sbjct: 523 TEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKG 582

Query: 483 LCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAE 536
             ++ K  +A +    M + G   +   +N          K    +EL  +  E
Sbjct: 583 FYKRKKFLEARELFEQMRREGLVADREIYNIFADINYDEGKMELTLELCDEAIE 636



 Score =  219 bits (558), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 143/472 (30%), Positives = 236/472 (50%), Gaps = 14/472 (2%)

Query: 88  NRHYDAVISFYRKL----VSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNM 143
           N + D  +SF RKL    ++ GLL    + N+ I+       G+ +  + +    L + M
Sbjct: 155 NPNLDVGVSFARKLFDKMLNYGLLISVDSCNLFISHLSEDLDGIKIALKGEWVLKLIEEM 214

Query: 144 IAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVS-GDYENGLISKTNIFSYSIIIDS 202
              G++P+  TY  +I   C+TG ++ A R+ ++M+S G   +G+I       Y+ +ID 
Sbjct: 215 QIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVI-------YTTLIDG 267

Query: 203 LCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPN 262
            CK G V  A  LF EM+ R I+P  +  T +I G C  G   E + LF EM+     P+
Sbjct: 268 FCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPD 327

Query: 263 LLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFL 322
            +T+  +ID  CK GK+ EA  L   M+Q GL P+  TY +L DG C  G +DTA E+  
Sbjct: 328 EVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLH 387

Query: 323 SMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAG 382
            M  KG +  + +YN L+NG CK  N+++A+ L + +   G     +TY TL+    ++ 
Sbjct: 388 EMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSR 447

Query: 383 QAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFN 442
           +   A +L  +M    ++P + T+N+L++G C +  +++  KL   +           +N
Sbjct: 448 EMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYN 507

Query: 443 CLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKN 502
            LI   C    +    E++  +  KG+VP   TY+I+I G C+   +++A      M   
Sbjct: 508 SLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGK 567

Query: 503 GCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDL 554
           G    V ++N L+ GF +  K  +  EL  +M      LV D   ++I  D+
Sbjct: 568 GFNLTVSSYNALIKGFYKRKKFLEARELFEQMR--REGLVADREIYNIFADI 617



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 121/404 (29%), Positives = 204/404 (50%), Gaps = 15/404 (3%)

Query: 158 LINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAK---- 213
           LI  F    NL V +   +K+       GL+   ++ S ++ I  L ++  +D  K    
Sbjct: 148 LIQDFWVNPNLDVGVSFARKLFDKMLNYGLL--ISVDSCNLFISHLSED--LDGIKIALK 203

Query: 214 -----ELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNV 268
                +L  EM+ +G+ P       +I   C  G   E   +  EM+  G  P+ + +  
Sbjct: 204 GEWVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTT 263

Query: 269 MIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKG 328
           +ID  CK G ++ A  L + M +R ++PD  TY +++ G C  GR+  A ++F  M  K 
Sbjct: 264 LIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKR 323

Query: 329 CKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQ 388
            +   V+Y  LI+GYCK   ++EA SL+ Q++  G+   ++TY  L  GL + G+   A 
Sbjct: 324 LEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTAN 383

Query: 389 KLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGL 448
           +L  EM    +E ++ TYN L++GLCK   + +AVKL   +E+  F      +  L+D  
Sbjct: 384 ELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAY 443

Query: 449 CKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNV 508
           CK+  +  A EL  ++  + L PTVVT++++++G C  G LE     L +M + G  PN 
Sbjct: 444 CKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNA 503

Query: 509 VTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVV 552
            T+N+L+  +   N      E+   M    + +VPD  T++I++
Sbjct: 504 TTYNSLIKQYCIRNNMRATTEIYRGMC--AKGVVPDGNTYNILI 545



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 128/427 (29%), Positives = 199/427 (46%), Gaps = 15/427 (3%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CK+G   + EA      M     +P    +  L     K  +  +    + ++    + P
Sbjct: 234 CKTG--KVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISP 291

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           DF+T   +I C      GLC   R+ EA  LF  M+   + PD +TY  LI+G+C+ G +
Sbjct: 292 DFITYTAVI-C------GLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKM 344

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
             A  LH +M+    + GL    NI +Y+ + D LCK G VD A EL  EM  +G+   +
Sbjct: 345 KEAFSLHNQML----QMGLTP--NIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNI 398

Query: 229 VVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLEL 288
               +L++G C AGN ++   L  +M   G  P+ +T+  ++D  CK  ++  A+ LL  
Sbjct: 399 YTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQ 458

Query: 289 MIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILN 348
           M+ R L P   T+N LM+G+C+ G ++   ++   M  KG      +YN LI  YC   N
Sbjct: 459 MLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNN 518

Query: 349 VEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNI 408
           +     +YR + + GV     TYN L+ G  +A     A  L  +M        +S+YN 
Sbjct: 519 MRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNA 578

Query: 409 LIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKG 468
           LI G  K     EA +LF  +         EI+N   D     G+++   EL  +  +K 
Sbjct: 579 LIKGFYKRKKFLEARELFEQMRREGLVADREIYNIFADINYDEGKMELTLELCDEAIEKC 638

Query: 469 LVPTVVT 475
           LV  + T
Sbjct: 639 LVGDIQT 645



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 107/394 (27%), Positives = 176/394 (44%), Gaps = 50/394 (12%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CK G  N++ A   F  M   + SP   ++  +   + +          + ++V   L P
Sbjct: 269 CKLG--NVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEP 326

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           D +T   LI+       G C E ++KEA  L   M+  G+ P+++TY  L +G C+ G +
Sbjct: 327 DEVTYTALID-------GYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEV 379

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
             A  L  +M     E       NI++Y+ +++ LCK G +D+A +L  +M+  G +P  
Sbjct: 380 DTANELLHEMCRKGLE------LNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDA 433

Query: 229 VVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLEL 288
           V  TTL+  +C +      + L  +MLD   +P ++TFNV+++  C  G + +   LL+ 
Sbjct: 434 VTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKW 493

Query: 289 MIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKG---------------CKH-- 331
           M+++G+ P+  TYNSL+  YC+   +    EI+  M +KG               CK   
Sbjct: 494 MLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARN 553

Query: 332 ------------------TVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNT 373
                             TV SYN LI G+ K     EA  L+ Q+   G+      YN 
Sbjct: 554 MKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVADREIYNI 613

Query: 374 LLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYN 407
                +  G+     +L DE     +  D+ T N
Sbjct: 614 FADINYDEGKMELTLELCDEAIEKCLVGDIQTKN 647



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 69/279 (24%), Positives = 116/279 (41%), Gaps = 30/279 (10%)

Query: 42  NEFLHENCKSGII-----------------NLNEARYFFGYMTHMQPSPPISSFNLLFGA 84
           NE LHE C+ G+                  N+++A      M      P   ++  L  A
Sbjct: 383 NELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDA 442

Query: 85  VAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMI 144
             K+R         R+++   L P  +T N+L+N       G C+   +++   L K M+
Sbjct: 443 YCKSREMVRAHELLRQMLDRELQPTVVTFNVLMN-------GFCMSGMLEDGEKLLKWML 495

Query: 145 AFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLC 204
             G+ P+  TY +LI  +C   N+     +++ M +     G++   N  +Y+I+I   C
Sbjct: 496 EKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCA----KGVVPDGN--TYNILIKGHC 549

Query: 205 KEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLL 264
           K   + +A  L  +M G+G N  V     LI GF     + E   LF +M   G   +  
Sbjct: 550 KARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVADRE 609

Query: 265 TFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNS 303
            +N+  D     GK+     L +  I++ L  D  T N+
Sbjct: 610 IYNIFADINYDEGKMELTLELCDEAIEKCLVGDIQTKNT 648


>gi|297745840|emb|CBI15896.3| unnamed protein product [Vitis vinifera]
          Length = 650

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 146/507 (28%), Positives = 253/507 (49%), Gaps = 18/507 (3%)

Query: 72  SPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVEN 131
            P I S+N L  A+ ++  +D   SF+    ++GL P+  T NILI       +  C + 
Sbjct: 111 QPGIRSYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNILI-------KISCRKK 163

Query: 132 RIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKT 191
           +  +A  L   M   G  PDV +YGTLIN   + G +S AL+L  +M     E G+    
Sbjct: 164 QFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMP----ERGVTP-- 217

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEM-KGRGINPAVVVCTTLIHGFCCAGNWEEVNGL 250
           ++  Y+I+ID   K+G +  A E++  + KG  + P +     +I+G C  G ++E   +
Sbjct: 218 DVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEI 277

Query: 251 FIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCL 310
           +  M       +L T++ +I  LC  G ++ A  + + M + G++PD   YN++++GY  
Sbjct: 278 WHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLR 337

Query: 311 VGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVIT 370
            GRI+   E++  M  +GC+ TVVSYNILI G  +   V+EA+S++  +         +T
Sbjct: 338 AGRIEECLELWKVMEKEGCR-TVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMT 396

Query: 371 YNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLE 430
           Y  L+ GL + G    A  + +E +    + D   Y+ +I+GLC+   + E   +   + 
Sbjct: 397 YGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMT 456

Query: 431 MNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLE 490
            +  +    + N +I+G  +A +L++A   F  +  KG  PTVVTY+ +I+GL +  +  
Sbjct: 457 KHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFS 516

Query: 491 KANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSI 550
           +A   +  M   G  PN++T++ LM+G  Q  K    + L  +    E+   PD    +I
Sbjct: 517 EAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQAL--EKGFKPDVKMHNI 574

Query: 551 VVDLLAKDEKYHEC-SAVSKSSYRACL 576
           ++  L    K  +     S+   R C+
Sbjct: 575 IIHGLCSSGKVEDALQLYSEMKQRKCV 601



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 146/557 (26%), Positives = 269/557 (48%), Gaps = 34/557 (6%)

Query: 29  RQIAAVSSPETQLNEF--LHE--NCKSGIINLN-------------EARYFFGYMTHMQP 71
           +  A  S P+  L+ F  +HE   C+ GI + N             EA  FF Y   M  
Sbjct: 86  KAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFETMGL 145

Query: 72  SPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVEN 131
           SP + ++N+L     + + +D        +   G  PD  +   LIN        L    
Sbjct: 146 SPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLIN-------SLAKNG 198

Query: 132 RIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKT 191
            + +A  LF  M   GV PDV  Y  LI+GF + G++  A  + ++++ G          
Sbjct: 199 YMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPS-----VYP 253

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
           NI SY+++I+ LCK G  D++ E++  MK       +   +TLIHG C +GN +    ++
Sbjct: 254 NIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVY 313

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
            EM + G  P+++ +N M++   + G+I E   L ++M + G      +YN L+ G    
Sbjct: 314 KEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCR-TVVSYNILIRGLFEN 372

Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
            ++D A  I+  +  K C    ++Y +L++G CK   + +A+S+  +  +         Y
Sbjct: 373 AKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAY 432

Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLF-HMLE 430
           +++++GL + G+      + D+M  +  +P+    N +I+G  + + +++A++ F +M+ 
Sbjct: 433 SSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVS 492

Query: 431 MNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLE 490
              F   +  +N LI+GL KA R   A+ L  ++  KG  P ++TYS++++GLC+  KL+
Sbjct: 493 KGCFP-TVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLD 551

Query: 491 KANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSI 550
            A +      + G  P+V   N ++HG   + K    ++L  +M   +R  VP+  T + 
Sbjct: 552 MALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMK--QRKCVPNLVTHNT 609

Query: 551 VVDLLAKDEKYHECSAV 567
           +++   K   +   S +
Sbjct: 610 LMEGFYKVRDFERASKI 626



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 107/394 (27%), Positives = 194/394 (49%), Gaps = 14/394 (3%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
           P I S+N++   + K   +D     + ++       D  T + LI+       GLC    
Sbjct: 253 PNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIH-------GLCGSGN 305

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
           +  AT ++K M   GV PDV+ Y T++NG+ R G +   L L K M              
Sbjct: 306 LDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCRT------- 358

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
           + SY+I+I  L +   VD+A  ++  +  +      +    L+HG C  G   +   +  
Sbjct: 359 VVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILE 418

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
           E  +     +   ++ MI+ LC+ G+++E  G+L+ M + G  P+    N++++G+    
Sbjct: 419 EAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRAS 478

Query: 313 RIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYN 372
           +++ A   F +M SKGC  TVV+YN LING  K     EA +L ++++  G +  +ITY+
Sbjct: 479 KLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYS 538

Query: 373 TLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMN 432
            L++GL Q  +   A  L+ +      +PD+  +NI+I GLC +  V++A++L+  ++  
Sbjct: 539 LLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQR 598

Query: 433 KFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQ 466
           K    +   N L++G  K    + A +++  + Q
Sbjct: 599 KCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQ 632



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 95/371 (25%), Positives = 193/371 (52%), Gaps = 5/371 (1%)

Query: 199 IIDSLCKEGLVDKAKELFLEMKG-RGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDL 257
           +I +  K  + D+A ++F  M    G  P +    +L++    +  W+E    F+    +
Sbjct: 84  VIKAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFETM 143

Query: 258 GPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTA 317
           G  PNL T+N++I   C+  + ++A  LL  M ++G +PD F+Y +L++     G +  A
Sbjct: 144 GLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDA 203

Query: 318 REIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISN-GVRQTVITYNTLLS 376
            ++F  M  +G    V  YNILI+G+ K  ++  A  ++ +++    V   + +YN +++
Sbjct: 204 LKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMIN 263

Query: 377 GLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEF 436
           GL + G+   + +++  MK      DL TY+ LI GLC +  +  A +++  +  N    
Sbjct: 264 GLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSP 323

Query: 437 GIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFL 496
            + ++N +++G  +AGR++   EL+  + ++G   TVV+Y+I+I GL    K+++A    
Sbjct: 324 DVVVYNTMLNGYLRAGRIEECLELWKVMEKEG-CRTVVSYNILIRGLFENAKVDEAISIW 382

Query: 497 LYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLA 556
             + +  C  + +T+  L+HG  +N   +K + +L +      +L  D   +S +++ L 
Sbjct: 383 ELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDL--DTFAYSSMINGLC 440

Query: 557 KDEKYHECSAV 567
           ++ +  E + V
Sbjct: 441 REGRLDEVAGV 451



 Score =  152 bits (383), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 99/351 (28%), Positives = 174/351 (49%), Gaps = 16/351 (4%)

Query: 44  FLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVS 103
            +H  C SG  NL+ A   +  M     SP +  +N +     +    +  +  ++ +  
Sbjct: 296 LIHGLCGSG--NLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEK 353

Query: 104 IGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFC 163
            G     ++ NILI       RGL    ++ EA  +++ +       D +TYG L++G C
Sbjct: 354 EGCRT-VVSYNILI-------RGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLC 405

Query: 164 RTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRG 223
           + G L+ AL + ++      ENG     + F+YS +I+ LC+EG +D+   +  +M   G
Sbjct: 406 KNGYLNKALSILEEA-----ENGR-GDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHG 459

Query: 224 INPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEAN 283
             P   VC  +I+GF  A   E+    F  M+  G  P ++T+N +I+ L K  + +EA 
Sbjct: 460 CKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAY 519

Query: 284 GLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGY 343
            L++ M+ +G  P+  TY+ LM+G C   ++D A  ++     KG K  V  +NI+I+G 
Sbjct: 520 ALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGL 579

Query: 344 CKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEM 394
           C    VE+A+ LY ++        ++T+NTL+ G ++      A K++D +
Sbjct: 580 CSSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDFERASKIWDHI 630


>gi|242084804|ref|XP_002442827.1| hypothetical protein SORBIDRAFT_08g003450 [Sorghum bicolor]
 gi|241943520|gb|EES16665.1| hypothetical protein SORBIDRAFT_08g003450 [Sorghum bicolor]
          Length = 899

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 136/435 (31%), Positives = 223/435 (51%), Gaps = 12/435 (2%)

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
           +++A WL   M   G R +  +Y  LI G C T  +  AL L   MV    ++G     N
Sbjct: 141 LRKACWLLMMMPLMGCRRNEYSYTILIQGLCETRCVREALVLLVMMV----QDG--CSLN 194

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
           + +Y+++I  LCKEG +  A+ +  EM  RG+ P+V     +I G+C +G  ++  G+  
Sbjct: 195 LHTYTLLIKGLCKEGRIHGARRVLEEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKA 254

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
            M   G  P+  T+N++I  LC G K +EA  LL   I RG  P   T+ ++++GYC   
Sbjct: 255 LMERNGCNPDDWTYNILIYGLC-GEKPDEAEELLNDAIVRGFTPTVITFTNIINGYCKAE 313

Query: 313 RIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYN 372
           RID A  +  SM S  CK  + +Y +LIN   K    +EA     ++ +NG+   V+ Y 
Sbjct: 314 RIDDALRVKTSMLSSNCKLDLQAYGVLINVLIKKCRFKEAKETVSEMFANGLAPNVVIYT 373

Query: 373 TLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMN 432
           +++ G  + G+ G A ++F  M+     P+  TY+ LI GL ++  + +A+ L   ++ +
Sbjct: 374 SIIDGYCKVGKVGAALEVFRLMEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQED 433

Query: 433 KFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKA 492
               G+  +  LI G CK    DNA+ LF  + Q GL P    Y+++ H LC+ G+ E+A
Sbjct: 434 GITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTHALCKSGRAEEA 493

Query: 493 NDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVV 552
             FL+   + G     VT+ +L+ GF +   T     L+ KM         D  T+S+++
Sbjct: 494 YSFLV---RKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMV--NEGCKADSYTYSVLL 548

Query: 553 DLLAKDEKYHECSAV 567
             L K +K +E  ++
Sbjct: 549 QALCKQKKLNEALSI 563



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 136/476 (28%), Positives = 229/476 (48%), Gaps = 19/476 (3%)

Query: 77  SFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEA 136
           S+ +L   + + R     +     +V  G   +  T  +LI       +GLC E RI  A
Sbjct: 162 SYTILIQGLCETRCVREALVLLVMMVQDGCSLNLHTYTLLI-------KGLCKEGRIHGA 214

Query: 137 TWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSY 196
             + + M   GV P V TY  +I+G+C++G +  AL +   M      NG     + ++Y
Sbjct: 215 RRVLEEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALM----ERNG--CNPDDWTY 268

Query: 197 SIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLD 256
           +I+I  LC E   D+A+EL  +   RG  P V+  T +I+G+C A   ++   +   ML 
Sbjct: 269 NILIYGLCGEK-PDEAEELLNDAIVRGFTPTVITFTNIINGYCKAERIDDALRVKTSMLS 327

Query: 257 LGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDT 316
              + +L  + V+I+ L K  +  EA   +  M   GL P+   Y S++DGYC VG++  
Sbjct: 328 SNCKLDLQAYGVLINVLIKKCRFKEAKETVSEMFANGLAPNVVIYTSIIDGYCKVGKVGA 387

Query: 317 AREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLS 376
           A E+F  M  +GC+    +Y+ LI G  +   + +AM+L  ++  +G+   VITY TL+ 
Sbjct: 388 ALEVFRLMEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQ 447

Query: 377 GLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEF 436
           G  +  +   A +LF+ M+   + PD   YN+L   LCK+   +EA   +  L       
Sbjct: 448 GQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTHALCKSGRAEEA---YSFLVRKGVVL 504

Query: 437 GIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFL 496
               +  L+DG  KAG  D A  L  K+  +G      TYS+++  LC++ KL +A   L
Sbjct: 505 TKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADSYTYSVLLQALCKQKKLNEALSIL 564

Query: 497 LYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVV 552
             M  +G   N+V +  ++   ++  K      + ++M        P  TT+++ +
Sbjct: 565 DQMTLSGVKCNIVAYTIIISEMIKEGKHDHAKSMFNEMISSGHK--PSATTYTVFI 618



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 127/497 (25%), Positives = 233/497 (46%), Gaps = 34/497 (6%)

Query: 72  SPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVEN 131
           +P + +F  +     K    D  +     ++S     D     +LIN    K    C   
Sbjct: 296 TPTVITFTNIINGYCKAERIDDALRVKTSMLSSNCKLDLQAYGVLINVLIKK----C--- 348

Query: 132 RIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKT 191
           R KEA      M A G+ P+V+ Y ++I+G+C+ G +  AL + + M   ++E     + 
Sbjct: 349 RFKEAKETVSEMFANGLAPNVVIYTSIIDGYCKVGKVGAALEVFRLM---EHEG---CRP 402

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
           N ++YS +I  L ++  + KA  L  +M+  GI P V+  TTLI G C    ++    LF
Sbjct: 403 NAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLF 462

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
             M   G  P+   +NV+   LCK G+  EA   L   +++G+   + TY SL+DG+   
Sbjct: 463 EMMEQNGLTPDEQAYNVLTHALCKSGRAEEAYSFL---VRKGVVLTKVTYTSLVDGFSKA 519

Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
           G  D A  +   M ++GCK    +Y++L+   CK   + EA+S+  Q+  +GV+  ++ Y
Sbjct: 520 GNTDFAAVLIEKMVNEGCKADSYTYSVLLQALCKQKKLNEALSILDQMTLSGVKCNIVAY 579

Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
             ++S + + G+  +A+ +F+EM     +P  +TY + I   CK   ++EA  L   +E 
Sbjct: 580 TIIISEMIKEGKHDHAKSMFNEMISSGHKPSATTYTVFISSYCKIGQIEEAEHLIGEMER 639

Query: 432 NKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIH---------- 481
           +     +  +N  I+G    G +D A+    ++      P   TY I++           
Sbjct: 640 DGVAPDVVTYNVFINGCGHMGYMDRAFSTLKRMIDASCEPNYWTYWILLKHFLKMSLVDA 699

Query: 482 ------GLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMA 535
                 G+    +L+     L  M K+G  P  VT+++++ GF +  +  +   L   M 
Sbjct: 700 HYVDTSGMWNWIELDTVWQLLERMVKHGLNPTAVTYSSIIAGFCKATRLEEACVLFDHMR 759

Query: 536 EPERNLVPDDTTFSIVV 552
              +++ P++  +++++
Sbjct: 760 --GKDISPNEEIYTMLI 774



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 114/357 (31%), Positives = 174/357 (48%), Gaps = 3/357 (0%)

Query: 207 GLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTF 266
           G + KA  L + M   G        T LI G C      E   L + M+  G   NL T+
Sbjct: 139 GDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCETRCVREALVLLVMMVQDGCSLNLHTY 198

Query: 267 NVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHS 326
            ++I  LCK G+I+ A  +LE M  RG+ P  +TYN+++DGYC  GR+  A  I   M  
Sbjct: 199 TLLIKGLCKEGRIHGARRVLEEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMER 258

Query: 327 KGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGY 386
            GC     +YNILI G C     +EA  L    I  G   TVIT+  +++G  +A +   
Sbjct: 259 NGCNPDDWTYNILIYGLCG-EKPDEAEELLNDAIVRGFTPTVITFTNIINGYCKAERIDD 317

Query: 387 AQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLID 446
           A ++   M   N + DL  Y +LI+ L K    +EA +    +  N     + I+  +ID
Sbjct: 318 ALRVKTSMLSSNCKLDLQAYGVLINVLIKKCRFKEAKETVSEMFANGLAPNVVIYTSIID 377

Query: 447 GLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAP 506
           G CK G++  A E+F  +  +G  P   TYS +I+GL +  KL KA   +  M+++G  P
Sbjct: 378 GYCKVGKVGAALEVFRLMEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITP 437

Query: 507 NVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
            V+T+ TL+ G  + ++      L   M   +  L PD+  ++++   L K  +  E
Sbjct: 438 GVITYTTLIQGQCKKHEFDNAFRLFEMM--EQNGLTPDEQAYNVLTHALCKSGRAEE 492



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 126/498 (25%), Positives = 222/498 (44%), Gaps = 48/498 (9%)

Query: 46  HENCKS----------GIINLNEARYFFGYMTHMQP---SPPISSFNLLFGAVAKNRHYD 92
           HE C+           G+I   +       +T MQ    +P + ++  L     K   +D
Sbjct: 397 HEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFD 456

Query: 93  AVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDV 152
                +  +   GL PD    N+L +        LC   R +EA   +  ++  GV    
Sbjct: 457 NAFRLFEMMEQNGLTPDEQAYNVLTH-------ALCKSGRAEEA---YSFLVRKGVVLTK 506

Query: 153 ITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKA 212
           +TY +L++GF + GN   A  L +KMV+         K + ++YS+++ +LCK+  +++A
Sbjct: 507 VTYTSLVDGFSKAGNTDFAAVLIEKMVNEG------CKADSYTYSVLLQALCKQKKLNEA 560

Query: 213 KELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDC 272
             +  +M   G+   +V  T +I      G  +    +F EM+  G +P+  T+ V I  
Sbjct: 561 LSILDQMTLSGVKCNIVAYTIIISEMIKEGKHDHAKSMFNEMISSGHKPSATTYTVFISS 620

Query: 273 LCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHT 332
            CK G+I EA  L+  M + G+ PD  TYN  ++G   +G +D A      M    C+  
Sbjct: 621 YCKIGQIEEAEHLIGEMERDGVAPDVVTYNVFINGCGHMGYMDRAFSTLKRMIDASCEPN 680

Query: 333 VVSYNILINGYCKI----------------LNVEEAMSLYRQIISNGVRQTVITYNTLLS 376
             +Y IL+  + K+                + ++    L  +++ +G+  T +TY+++++
Sbjct: 681 YWTYWILLKHFLKMSLVDAHYVDTSGMWNWIELDTVWQLLERMVKHGLNPTAVTYSSIIA 740

Query: 377 GLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLF-HMLEMNKFE 435
           G  +A +   A  LFD M+  ++ P+   Y +LI   C      +AV     M+E   F+
Sbjct: 741 GFCKATRLEEACVLFDHMRGKDISPNEEIYTMLIKCCCDIKLFGKAVSFVTDMIEFG-FQ 799

Query: 436 FGIEIFNCLIDGLCKAGRLDNAWELF-HKLPQKGLVPTVVTYSIMIHGLCRKGKLEKAND 494
             +E ++ LI GLC  G  D A  LF   L  +      V + I+  GL + G ++  + 
Sbjct: 800 PHLESYHYLIVGLCDEGDYDKAKSLFCDLLGMEDYNHNEVAWKILNDGLLKAGHVDFCSQ 859

Query: 495 FLLYMEKNGCAPNVVTFN 512
            L  ME   C  +  T++
Sbjct: 860 LLSAMENRHCQIDSETYS 877



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 88/321 (27%), Positives = 144/321 (44%), Gaps = 38/321 (11%)

Query: 276 GGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVS 335
           GG + +A  LL +M   G   + ++Y  L+ G C    +  A  + + M   GC   + +
Sbjct: 138 GGDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCETRCVREALVLLVMMVQDGCSLNLHT 197

Query: 336 YNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMK 395
           Y +LI G CK   +  A  +  ++   GV  +V TYN ++ G  ++G+   A  +   M+
Sbjct: 198 YTLLIKGLCKEGRIHGARRVLEEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALME 257

Query: 396 LYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLD 455
                PD  TYNILI GLC      EA +L +   +  F   +  F  +I+G CKA R+D
Sbjct: 258 RNGCNPDDWTYNILIYGLCGEK-PDEAEELLNDAIVRGFTPTVITFTNIINGYCKAERID 316

Query: 456 NAW-----------------------------------ELFHKLPQKGLVPTVVTYSIMI 480
           +A                                    E   ++   GL P VV Y+ +I
Sbjct: 317 DALRVKTSMLSSNCKLDLQAYGVLINVLIKKCRFKEAKETVSEMFANGLAPNVVIYTSII 376

Query: 481 HGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERN 540
            G C+ GK+  A +    ME  GC PN  T+++L++G +Q+ K  K + L+ KM E    
Sbjct: 377 DGYCKVGKVGAALEVFRLMEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQED--G 434

Query: 541 LVPDDTTFSIVVDLLAKDEKY 561
           + P   T++ ++    K  ++
Sbjct: 435 ITPGVITYTTLIQGQCKKHEF 455


>gi|357164338|ref|XP_003580022.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Brachypodium distachyon]
          Length = 966

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 143/539 (26%), Positives = 259/539 (48%), Gaps = 41/539 (7%)

Query: 41  LNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHY------DAV 94
            N  +H  C +G  +   A   F  MT     P   ++N+  G++            D V
Sbjct: 344 FNSLVHGYCNAG--DYAYAYKLFNRMTTCGSPPGYVAYNIFIGSICGQEELPNAELLDLV 401

Query: 95  ISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVIT 154
              Y ++++   + + +          N  R LC   + ++A  + K M+  G  PD  T
Sbjct: 402 EKVYEEMLAASCVLNKVNT-------ANFSRCLCGVGKFEKAFQILKEMMRKGFVPDTST 454

Query: 155 YGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKE 214
           Y  +I   C+   +  +  L ++M             ++++Y+I+IDS CK GL+++A+ 
Sbjct: 455 YTKVITFLCQAKKVEKSFLLFQEMKRAGV------NPDVYTYTILIDSFCKAGLIEQARS 508

Query: 215 LFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLC 274
            F EM+  G +P VV  T L+H +  +    + + +F  M+D    PN +T++ +ID LC
Sbjct: 509 WFDEMRSVGCSPNVVTYTALLHAYLKSKQLIQAHDIFHRMVDAACYPNAVTYSALIDGLC 568

Query: 275 KGGKINEANGLLELMIQRGLN----------------PDRFTYNSLMDGYCLVGRIDTAR 318
           K G+I +A  + E +I    N                P+  TY +L+DG C   ++  A 
Sbjct: 569 KAGEIQKACEVYEKLIGTSGNVESDFYFEGNDTCTIAPNVVTYGALIDGLCKAQKVSDAH 628

Query: 319 EIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGL 378
           E+  +M + GC+   + Y+ LI+G+CKI  ++ A  ++ ++   G   +V TY +L+  +
Sbjct: 629 ELLDAMLAAGCEPNQIVYDALIDGFCKIGKIDNAQEVFLRMTKCGYLPSVHTYTSLIDRM 688

Query: 379 FQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGI 438
           F+ G+   A K+  EM   +  P++ TY  +IDGL K   +++A+ L  ++E       +
Sbjct: 689 FKDGRLDLAMKVLSEMLNDSCNPNVVTYTAMIDGLSKVGEIEKALNLLSLMEEKGCSPNV 748

Query: 439 EIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLY 498
             +  LIDGL K G+ D + +LF ++  KG  P  VTY ++I+  C  G L++A+  L  
Sbjct: 749 VTYTALIDGLGKTGKADASLKLFKQMNSKGCAPNYVTYRVLINHCCAAGLLDEAHLLLDE 808

Query: 499 MEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAK 557
           M+      ++  ++  + GF  + K    + LL +M   E   VP    + +++D  +K
Sbjct: 809 MKHTHWPKHLQGYHCAVQGF--SKKFIASLGLLEEMESHET--VPIAPVYGMLIDSFSK 863



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 142/559 (25%), Positives = 242/559 (43%), Gaps = 65/559 (11%)

Query: 26  KSPRQIAAVSSPETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAV 85
           K   ++ A S    ++N      C  G+    +A      M      P  S++  +   +
Sbjct: 403 KVYEEMLAASCVLNKVNTANFSRCLCGVGKFEKAFQILKEMMRKGFVPDTSTYTKVITFL 462

Query: 86  AKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIA 145
            + +  +     ++++   G+ PD  T  ILI+ F       C    I++A   F  M +
Sbjct: 463 CQAKKVEKSFLLFQEMKRAGVNPDVYTYTILIDSF-------CKAGLIEQARSWFDEMRS 515

Query: 146 FGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCK 205
            G  P+V+TY  L++ + ++  L  A  +  +MV            N  +YS +ID LCK
Sbjct: 516 VGCSPNVVTYTALLHAYLKSKQLIQAHDIFHRMVDA------ACYPNAVTYSALIDGLCK 569

Query: 206 EGLVDKAKELFLEMKGRG----------------INPAVVVCTTLIHGFCCAGNWEEVNG 249
            G + KA E++ ++ G                  I P VV    LI G C A    + + 
Sbjct: 570 AGEIQKACEVYEKLIGTSGNVESDFYFEGNDTCTIAPNVVTYGALIDGLCKAQKVSDAHE 629

Query: 250 LFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYC 309
           L   ML  G  PN + ++ +ID  CK GKI+ A  +   M + G  P   TY SL+D   
Sbjct: 630 LLDAMLAAGCEPNQIVYDALIDGFCKIGKIDNAQEVFLRMTKCGYLPSVHTYTSLIDRMF 689

Query: 310 LVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVI 369
             GR+D A ++   M +  C   VV+Y  +I+G  K+  +E+A++L   +   G    V+
Sbjct: 690 KDGRLDLAMKVLSEMLNDSCNPNVVTYTAMIDGLSKVGEIEKALNLLSLMEEKGCSPNVV 749

Query: 370 TYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHML 429
           TY  L+ GL + G+A  + KLF +M      P+  TY +LI+  C    + EA  L   +
Sbjct: 750 TYTALIDGLGKTGKADASLKLFKQMNSKGCAPNYVTYRVLINHCCAAGLLDEAHLLLDEM 809

Query: 430 EMNKFEFGIEIFNC---------------------------------LIDGLCKAGRLDN 456
           +   +   ++ ++C                                 LID   KAGRL+ 
Sbjct: 810 KHTHWPKHLQGYHCAVQGFSKKFIASLGLLEEMESHETVPIAPVYGMLIDSFSKAGRLET 869

Query: 457 AWELFHKLPQKGL---VPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNT 513
           A EL  +L +      + +   Y+ +I  LC   ++E+A      M + G  P+++ F +
Sbjct: 870 ALELHKELVEVSSSLNMTSTGMYASLIQALCLASQVEEAFTLYTEMTRKGIVPDLIVFVS 929

Query: 514 LMHGFLQNNKTSKVVELLH 532
           L+ G ++ NK  + ++L +
Sbjct: 930 LVKGLIEVNKWDEALQLCY 948



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 138/496 (27%), Positives = 236/496 (47%), Gaps = 40/496 (8%)

Query: 18  KVKLSSLFKSPRQIAAVSSPETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISS 77
           KV+ S L     + A V+         +   CK+G+I   +AR +F  M  +  SP + +
Sbjct: 467 KVEKSFLLFQEMKRAGVNPDVYTYTILIDSFCKAGLIE--QARSWFDEMRSVGCSPNVVT 524

Query: 78  FNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEAT 137
           +  L  A  K++        + ++V     P+ +T + LI+       GLC    I++A 
Sbjct: 525 YTALLHAYLKSKQLIQAHDIFHRMVDAACYPNAVTYSALID-------GLCKAGEIQKAC 577

Query: 138 WLFKNMIAFG----------------VRPDVITYGTLINGFCRTGNLSVALRLHKKMVSG 181
            +++ +I                   + P+V+TYG LI+G C+   +S A  L   M++ 
Sbjct: 578 EVYEKLIGTSGNVESDFYFEGNDTCTIAPNVVTYGALIDGLCKAQKVSDAHELLDAMLAA 637

Query: 182 DYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCA 241
             E       N   Y  +ID  CK G +D A+E+FL M   G  P+V   T+LI      
Sbjct: 638 GCE------PNQIVYDALIDGFCKIGKIDNAQEVFLRMTKCGYLPSVHTYTSLIDRMFKD 691

Query: 242 GNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTY 301
           G  +    +  EML+    PN++T+  MID L K G+I +A  LL LM ++G +P+  TY
Sbjct: 692 GRLDLAMKVLSEMLNDSCNPNVVTYTAMIDGLSKVGEIEKALNLLSLMEEKGCSPNVVTY 751

Query: 302 NSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIIS 361
            +L+DG    G+ D + ++F  M+SKGC    V+Y +LIN  C    ++EA  L  ++  
Sbjct: 752 TALIDGLGKTGKADASLKLFKQMNSKGCAPNYVTYRVLINHCCAAGLLDEAHLLLDEMKH 811

Query: 362 NGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQE 421
               + +  Y+  + G  +   A     L +EM+ +   P    Y +LID   K   ++ 
Sbjct: 812 THWPKHLQGYHCAVQGFSKKFIASLG--LLEEMESHETVPIAPVYGMLIDSFSKAGRLET 869

Query: 422 AVKLFHML-----EMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTY 476
           A++L   L      +N    G+  +  LI  LC A +++ A+ L+ ++ +KG+VP ++ +
Sbjct: 870 ALELHKELVEVSSSLNMTSTGM--YASLIQALCLASQVEEAFTLYTEMTRKGIVPDLIVF 927

Query: 477 SIMIHGLCRKGKLEKA 492
             ++ GL    K ++A
Sbjct: 928 VSLVKGLIEVNKWDEA 943



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 126/504 (25%), Positives = 205/504 (40%), Gaps = 79/504 (15%)

Query: 113 LNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVAL 172
           LN+L+       R  C      EA      +  FG RP  +TY  L+      G + +  
Sbjct: 172 LNVLV-------RRCCRHGLWDEALEELGRLKDFGYRPSAVTYNALVQVLASAGQVEMGF 224

Query: 173 RLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCT 232
           R+ K+M +  +    + ++ I  ++    +LCK G    A  +   ++    N   V+CT
Sbjct: 225 RVQKEMSASGF---CMDRSTIGYFA---QALCKVGRWADALNM---LEKEDFNLDTVLCT 275

Query: 233 TLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQR 292
            +I G   A  + E       M      PN++T+  ++    K  +      ++ +M+  
Sbjct: 276 QMISGLMEASLFNEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQFGWCKRIINMMMTE 335

Query: 293 GLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCK------- 345
           G NP+   +NSL+ GYC  G    A ++F  M + G     V+YNI I   C        
Sbjct: 336 GCNPNPSLFNSLVHGYCNAGDYAYAYKLFNRMTTCGSPPGYVAYNIFIGSICGQEELPNA 395

Query: 346 ------------------ILN----------------VEEAMSLYRQIISNGVRQTVITY 371
                             +LN                 E+A  + ++++  G      TY
Sbjct: 396 ELLDLVEKVYEEMLAASCVLNKVNTANFSRCLCGVGKFEKAFQILKEMMRKGFVPDTSTY 455

Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
             +++ L QA +   +  LF EMK   V PD+ TY ILID  CK   +++A   F  +  
Sbjct: 456 TKVITFLCQAKKVEKSFLLFQEMKRAGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRS 515

Query: 432 NKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEK 491
                 +  +  L+    K+ +L  A ++FH++      P  VTYS +I GLC+ G+++K
Sbjct: 516 VGCSPNVVTYTALLHAYLKSKQLIQAHDIFHRMVDAACYPNAVTYSALIDGLCKAGEIQK 575

Query: 492 A---------------NDFLLYMEKNGC---APNVVTFNTLMHGFLQNNKTSKVVELLHK 533
           A               +DF  Y E N     APNVVT+  L+ G  +  K S   ELL  
Sbjct: 576 ACEVYEKLIGTSGNVESDF--YFEGNDTCTIAPNVVTYGALIDGLCKAQKVSDAHELLDA 633

Query: 534 MAEPERNLVPDDTTFSIVVDLLAK 557
           M        P+   +  ++D   K
Sbjct: 634 MLAA--GCEPNQIVYDALIDGFCK 655


>gi|356560499|ref|XP_003548529.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic-like [Glycine max]
          Length = 836

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 144/514 (28%), Positives = 245/514 (47%), Gaps = 39/514 (7%)

Query: 50  KSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPD 109
           KSG     EA  F   M   + +P + ++ +L   + K   ++       ++ S+G  P+
Sbjct: 302 KSG--RFEEALRFKDRMVRSKVNPSVVTYGVLISGLMKLEMFEEANEVLVEMYSMGFAPN 359

Query: 110 FLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLS 169
            +  N LI+       G C +  + EA  +   M   G++P+ +T+ TL+ GFCR+  + 
Sbjct: 360 EVVFNALID-------GYCRKGDMGEALRVRDEMAMKGMKPNFVTFNTLLQGFCRSNQME 412

Query: 170 VALR--------------------LHKKMVSGDYENGLISKTNIFSYSI---------II 200
            A +                    +H+ M    + + L   T + S +I         ++
Sbjct: 413 QAEQVLVYILSSGLSVNMDVCSYVIHRLMERSGFVSALKIVTKLLSGNIRVSDSLLTPLV 472

Query: 201 DSLCKEGLVDKAKELFLEMKG-RGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGP 259
             LCK     +A EL+ ++   +G+    V    L+HG C  GN EEV  +  +ML+ G 
Sbjct: 473 VGLCKCEGHSEAIELWFKLAAVKGLAANTVTSNALLHGLCERGNMEEVFEVLKQMLEKGL 532

Query: 260 RPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTARE 319
             + +++N +I   CK GKI EA  L E M+Q+   PD +TYN LM G   +G+ID    
Sbjct: 533 LLDRISYNTLIFGCCKWGKIEEAFKLKEEMVQQEFQPDTYTYNFLMKGLADMGKIDDVHR 592

Query: 320 IFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLF 379
           +       G    V +Y +L+ GYCK   +E+A+  ++ +    V  + + YN L++   
Sbjct: 593 LLHEAKEYGFVPNVYTYALLLEGYCKADRIEDAVKFFKNLDYEKVELSSVVYNILIAAYC 652

Query: 380 QAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIE 439
           + G    A KL D MK   + P  +TY+ LI G+C    V EA ++F  +        + 
Sbjct: 653 RIGNVTEAFKLRDAMKSRGILPTCATYSSLIHGMCCIGRVDEAKEIFEEMRNEGLLPNVF 712

Query: 440 IFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYM 499
            +  LI G CK G++D    +  ++   G+ P  +TY+IMI G C+ G +++A + L  M
Sbjct: 713 CYTALIGGHCKLGQMDIVGSILLEMSSNGIRPNKITYTIMIDGYCKLGNMKEARELLNEM 772

Query: 500 EKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHK 533
            +NG AP+ VT+N L  G+ +  + +  ++  HK
Sbjct: 773 IRNGIAPDTVTYNALQKGYCKERELTVTLQSDHK 806



 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 140/518 (27%), Positives = 256/518 (49%), Gaps = 26/518 (5%)

Query: 39  TQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFY 98
           T +N F    CK G   + +A   F  M  +   P + ++N +   + K+  ++  + F 
Sbjct: 260 TAINAF----CKGG--RVGDAVDLFCKMEGLGVFPNVVTYNNVIDGLFKSGRFEEALRFK 313

Query: 99  RKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTL 158
            ++V   + P  +T  +LI+       GL      +EA  +   M + G  P+ + +  L
Sbjct: 314 DRMVRSKVNPSVVTYGVLIS-------GLMKLEMFEEANEVLVEMYSMGFAPNEVVFNAL 366

Query: 159 INGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLE 218
           I+G+CR G++  ALR+  +M       G+  K N  +++ ++   C+   +++A+++ + 
Sbjct: 367 IDGYCRKGDMGEALRVRDEMAM----KGM--KPNFVTFNTLLQGFCRSNQMEQAEQVLVY 420

Query: 219 MKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPR--PNLLTFNVMIDCLCKG 276
           +   G++  + VC+ +IH       +     +  ++L    R   +LLT  V+  C C+G
Sbjct: 421 ILSSGLSVNMDVCSYVIHRLMERSGFVSALKIVTKLLSGNIRVSDSLLTPLVVGLCKCEG 480

Query: 277 GKINEANGL-LELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVS 335
              +EA  L  +L   +GL  +  T N+L+ G C  G ++   E+   M  KG     +S
Sbjct: 481 H--SEAIELWFKLAAVKGLAANTVTSNALLHGLCERGNMEEVFEVLKQMLEKGLLLDRIS 538

Query: 336 YNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMK 395
           YN LI G CK   +EEA  L  +++    +    TYN L+ GL   G+     +L  E K
Sbjct: 539 YNTLIFGCCKWGKIEEAFKLKEEMVQQEFQPDTYTYNFLMKGLADMGKIDDVHRLLHEAK 598

Query: 396 LYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLD 455
            Y   P++ TY +L++G CK + +++AVK F  L+  K E    ++N LI   C+ G + 
Sbjct: 599 EYGFVPNVYTYALLLEGYCKADRIEDAVKFFKNLDYEKVELSSVVYNILIAAYCRIGNVT 658

Query: 456 NAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLM 515
            A++L   +  +G++PT  TYS +IHG+C  G++++A +    M   G  PNV  +  L+
Sbjct: 659 EAFKLRDAMKSRGILPTCATYSSLIHGMCCIGRVDEAKEIFEEMRNEGLLPNVFCYTALI 718

Query: 516 HGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
            G  +  +   V  +L +M+     + P+  T++I++D
Sbjct: 719 GGHCKLGQMDIVGSILLEMS--SNGIRPNKITYTIMID 754



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 111/417 (26%), Positives = 199/417 (47%), Gaps = 43/417 (10%)

Query: 187 LISKTNIF----SYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAG 242
           + SK  +F    + ++++ SL K   + K+ E+F ++  +G+ P V   TT I+ FC  G
Sbjct: 211 MFSKRGVFPCLKTCNLLLSSLVKANELHKSYEVF-DLACQGVAPDVFTFTTAINAFCKGG 269

Query: 243 NWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYN 302
              +   LF +M  LG  PN++T+N +ID L K G+  EA    + M++  +NP   TY 
Sbjct: 270 RVGDAVDLFCKMEGLGVFPNVVTYNNVIDGLFKSGRFEEALRFKDRMVRSKVNPSVVTYG 329

Query: 303 SLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISN 362
            L+ G   +   + A E+ + M+S G     V +N LI+GYC+  ++ EA+ +  ++   
Sbjct: 330 VLISGLMKLEMFEEANEVLVEMYSMGFAPNEVVFNALIDGYCRKGDMGEALRVRDEMAMK 389

Query: 363 GVRQTVITYNTLLSGLFQAGQAGYAQ---------------------------------- 388
           G++   +T+NTLL G  ++ Q   A+                                  
Sbjct: 390 GMKPNFVTFNTLLQGFCRSNQMEQAEQVLVYILSSGLSVNMDVCSYVIHRLMERSGFVSA 449

Query: 389 -KLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKL-FHMLEMNKFEFGIEIFNCLID 446
            K+  ++   N+    S    L+ GLCK     EA++L F +  +          N L+ 
Sbjct: 450 LKIVTKLLSGNIRVSDSLLTPLVVGLCKCEGHSEAIELWFKLAAVKGLAANTVTSNALLH 509

Query: 447 GLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAP 506
           GLC+ G ++  +E+  ++ +KGL+   ++Y+ +I G C+ GK+E+A      M +    P
Sbjct: 510 GLCERGNMEEVFEVLKQMLEKGLLLDRISYNTLIFGCCKWGKIEEAFKLKEEMVQQEFQP 569

Query: 507 NVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
           +  T+N LM G     K   V  LLH+    E   VP+  T++++++   K ++  +
Sbjct: 570 DTYTYNFLMKGLADMGKIDDVHRLLHEAK--EYGFVPNVYTYALLLEGYCKADRIED 624



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 76/283 (26%), Positives = 132/283 (46%), Gaps = 16/283 (5%)

Query: 298 RFTYNSLMDGYCLVGRIDTA-------REI---FLSMHSKGCKHTVVSYNILINGYC--- 344
           RF    L+DG+       T        REI    L ++    +  +   ++L++  C   
Sbjct: 138 RFLLARLIDGHVPTWSSKTTTSFHDRLREIASSMLELNQGSDEQRLGELDLLLHILCSQF 197

Query: 345 KILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLS 404
           K L    A  ++      GV   + T N LLS L +A +   + ++FD +    V PD+ 
Sbjct: 198 KCLGSRCAFDIFVMFSKRGVFPCLKTCNLLLSSLVKANELHKSYEVFD-LACQGVAPDVF 256

Query: 405 TYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKL 464
           T+   I+  CK   V +AV LF  +E       +  +N +IDGL K+GR + A     ++
Sbjct: 257 TFTTAINAFCKGGRVGDAVDLFCKMEGLGVFPNVVTYNNVIDGLFKSGRFEEALRFKDRM 316

Query: 465 PQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKT 524
            +  + P+VVTY ++I GL +    E+AN+ L+ M   G APN V FN L+ G+ +    
Sbjct: 317 VRSKVNPSVVTYGVLISGLMKLEMFEEANEVLVEMYSMGFAPNEVVFNALIDGYCRKGDM 376

Query: 525 SKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAV 567
            + + +  +MA   + + P+  TF+ ++    +  +  +   V
Sbjct: 377 GEALRVRDEMA--MKGMKPNFVTFNTLLQGFCRSNQMEQAEQV 417


>gi|255563546|ref|XP_002522775.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223538013|gb|EEF39626.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1071

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 142/515 (27%), Positives = 250/515 (48%), Gaps = 50/515 (9%)

Query: 72  SPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVEN 131
           +P + + N+L G + K R   AV  F++++++  + PD  T NILIN        LCVE 
Sbjct: 130 NPSVYTCNMLLGKLVKERKVGAVWLFFKEMLARRVCPDVSTFNILINV-------LCVEG 182

Query: 132 RIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKT 191
           ++K+A +L K M   G  P V+TY T++N +C+ G    AL L  +M S   E       
Sbjct: 183 KLKKAGYLLKKMEESGYVPSVVTYNTVLNWYCKKGRYKAALELIDQMGSKGIE------A 236

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
           +  +Y++++D LCK     K   L  +M+ R I+P  +   ++I+GF   G       +F
Sbjct: 237 DACTYNMLVDDLCKNNRSAKGYLLLKKMRKRMISPNEITYNSIINGFVKEGKIGAATRIF 296

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
            EM  L   PN +T+N +ID  C  G   +A  +LE+M   G  P+  +Y++L++G C  
Sbjct: 297 QEMSMLNLLPNCVTYNALIDGHCHDGNFEQALTILEMMEATGPKPNEVSYSALLNGLCRH 356

Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
            + + ++ I   M   G     ++Y  +I+G C+   + E++ L  +++ +GV   V+T+
Sbjct: 357 AKFELSKSILERMRMNGMIVGCIAYTAMIDGLCRNGLLNESVKLLDKMLKDGVVPDVVTF 416

Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
           + L++G  + G+    +++  +M    + P+   Y  LI   CK   V EA K++  +  
Sbjct: 417 SVLINGFCRVGKIKNVKEIICKMYKAGLAPNSIIYTTLIYNYCKTGDVVEAFKVYVAMSR 476

Query: 432 NKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHG--------- 482
             ++    I N L+  LCK G++  A   FH + + G VP  +T+  +I+G         
Sbjct: 477 IGYDANCFICNVLVSSLCKDGKVGVAEYFFHHMSKIGNVPNSITFDCIINGYGNSGNGLK 536

Query: 483 --------------------------LCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMH 516
                                     LCR GK ++A   L  +     A + VT+NT++ 
Sbjct: 537 AFSMFDEMIKAGHHPSHFTYGGLLKALCRAGKFKEAKRLLDKLHYIPSAVDTVTYNTILV 596

Query: 517 GFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIV 551
              ++   +  V L  +M   +RN++PD  T++I+
Sbjct: 597 ETFKSGMLTDAVALFDEMV--QRNVLPDSYTYAII 629



 Score =  198 bits (503), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 122/403 (30%), Positives = 209/403 (51%), Gaps = 6/403 (1%)

Query: 188 ISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEV 247
           + K+N   + ++I    +EG+V  A E F  M  RG NP+V  C  L+           V
Sbjct: 93  LCKSNPSVFDLLIRVYLREGMVGDALETFRLMGIRGFNPSVYTCNMLLGKLVKERKVGAV 152

Query: 248 NGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDG 307
              F EML     P++ TFN++I+ LC  GK+ +A  LL+ M + G  P   TYN++++ 
Sbjct: 153 WLFFKEMLARRVCPDVSTFNILINVLCVEGKLKKAGYLLKKMEESGYVPSVVTYNTVLNW 212

Query: 308 YCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQT 367
           YC  GR   A E+   M SKG +    +YN+L++  CK     +   L +++    +   
Sbjct: 213 YCKKGRYKAALELIDQMGSKGIEADACTYNMLVDDLCKNNRSAKGYLLLKKMRKRMISPN 272

Query: 368 VITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFH 427
            ITYN++++G  + G+ G A ++F EM + N+ P+  TYN LIDG C +   ++A+ +  
Sbjct: 273 EITYNSIINGFVKEGKIGAATRIFQEMSMLNLLPNCVTYNALIDGHCHDGNFEQALTILE 332

Query: 428 MLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKG 487
           M+E    +     ++ L++GLC+  + + +  +  ++   G++   + Y+ MI GLCR G
Sbjct: 333 MMEATGPKPNEVSYSALLNGLCRHAKFELSKSILERMRMNGMIVGCIAYTAMIDGLCRNG 392

Query: 488 KLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTT 547
            L ++   L  M K+G  P+VVTF+ L++GF +  K   V E++ KM +    L P+   
Sbjct: 393 LLNESVKLLDKMLKDGVVPDVVTFSVLINGFCRVGKIKNVKEIICKMYKA--GLAPNSII 450

Query: 548 FSIVVDLLAKD----EKYHECSAVSKSSYRACLYVTIFQPSSL 586
           ++ ++    K     E +    A+S+  Y A  ++     SSL
Sbjct: 451 YTTLIYNYCKTGDVVEAFKVYVAMSRIGYDANCFICNVLVSSL 493



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 135/517 (26%), Positives = 241/517 (46%), Gaps = 60/517 (11%)

Query: 45  LHENCKSGIINLNE----ARYFFGYMTHMQP---SPPISSFNLLFGAVAKNRHYDAVISF 97
           L+EN KS + +L++    ++  FG + +  P   S P S F+LL     +       +  
Sbjct: 62  LYENAKSILKHLSQMGVGSKSVFGALMNTYPLCKSNP-SVFDLLIRVYLREGMVGDALET 120

Query: 98  YRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLF-KNMIAFGVRPDVITYG 156
           +R +   G  P   T N+L+        G  V+ R   A WLF K M+A  V PDV T+ 
Sbjct: 121 FRLMGIRGFNPSVYTCNMLL--------GKLVKERKVGAVWLFFKEMLARRVCPDVSTF- 171

Query: 157 TLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELF 216
                                                   +I+I+ LC EG + KA  L 
Sbjct: 172 ----------------------------------------NILINVLCVEGKLKKAGYLL 191

Query: 217 LEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKG 276
            +M+  G  P+VV   T+++ +C  G ++    L  +M   G   +  T+N+++D LCK 
Sbjct: 192 KKMEESGYVPSVVTYNTVLNWYCKKGRYKAALELIDQMGSKGIEADACTYNMLVDDLCKN 251

Query: 277 GKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSY 336
            +  +   LL+ M +R ++P+  TYNS+++G+   G+I  A  IF  M         V+Y
Sbjct: 252 NRSAKGYLLLKKMRKRMISPNEITYNSIINGFVKEGKIGAATRIFQEMSMLNLLPNCVTY 311

Query: 337 NILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKL 396
           N LI+G+C   N E+A+++   + + G +   ++Y+ LL+GL +  +   ++ + + M++
Sbjct: 312 NALIDGHCHDGNFEQALTILEMMEATGPKPNEVSYSALLNGLCRHAKFELSKSILERMRM 371

Query: 397 YNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDN 456
             +      Y  +IDGLC+N  + E+VKL   +  +     +  F+ LI+G C+ G++ N
Sbjct: 372 NGMIVGCIAYTAMIDGLCRNGLLNESVKLLDKMLKDGVVPDVVTFSVLINGFCRVGKIKN 431

Query: 457 AWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMH 516
             E+  K+ + GL P  + Y+ +I+  C+ G + +A    + M + G   N    N L+ 
Sbjct: 432 VKEIICKMYKAGLAPNSIIYTTLIYNYCKTGDVVEAFKVYVAMSRIGYDANCFICNVLVS 491

Query: 517 GFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
              ++ K        H M++     VP+  TF  +++
Sbjct: 492 SLCKDGKVGVAEYFFHHMSKIGN--VPNSITFDCIIN 526



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 141/575 (24%), Positives = 246/575 (42%), Gaps = 73/575 (12%)

Query: 56  LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNI 115
           L +A Y    M      P + ++N +     K   Y A +    ++ S G+  D  T N+
Sbjct: 184 LKKAGYLLKKMEESGYVPSVVTYNTVLNWYCKKGRYKAALELIDQMGSKGIEADACTYNM 243

Query: 116 LINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLH 175
           L++        LC  NR  +   L K M    + P+ ITY ++INGF + G +  A R+ 
Sbjct: 244 LVD-------DLCKNNRSAKGYLLLKKMRKRMISPNEITYNSIINGFVKEGKIGAATRIF 296

Query: 176 KKMV--------------------SGDYENGLI---------SKTNIFSYSIIIDSLCKE 206
           ++M                      G++E  L           K N  SYS +++ LC+ 
Sbjct: 297 QEMSMLNLLPNCVTYNALIDGHCHDGNFEQALTILEMMEATGPKPNEVSYSALLNGLCRH 356

Query: 207 GLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTF 266
              + +K +   M+  G+    +  T +I G C  G   E   L  +ML  G  P+++TF
Sbjct: 357 AKFELSKSILERMRMNGMIVGCIAYTAMIDGLCRNGLLNESVKLLDKMLKDGVVPDVVTF 416

Query: 267 NVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHS 326
           +V+I+  C+ GKI     ++  M + GL P+   Y +L+  YC  G +  A +++++M  
Sbjct: 417 SVLINGFCRVGKIKNVKEIICKMYKAGLAPNSIIYTTLIYNYCKTGDVVEAFKVYVAMSR 476

Query: 327 KGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGY 386
            G        N+L++  CK   V  A   +  +   G     IT++ +++G   +G    
Sbjct: 477 IGYDANCFICNVLVSSLCKDGKVGVAEYFFHHMSKIGNVPNSITFDCIINGYGNSGNGLK 536

Query: 387 AQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLID 446
           A  +FDEM      P   TY  L+  LC+    +EA +L   L           +N ++ 
Sbjct: 537 AFSMFDEMIKAGHHPSHFTYGGLLKALCRAGKFKEAKRLLDKLHYIPSAVDTVTYNTILV 596

Query: 447 GLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDF----------- 495
              K+G L +A  LF ++ Q+ ++P   TY+I+  GL R+GK+  A  F           
Sbjct: 597 ETFKSGMLTDAVALFDEMVQRNVLPDSYTYAIIFAGLIRRGKMVAALHFYGNLLGKGAVS 656

Query: 496 ---LLY----------------------MEKNGCAPNVVTFNTLMHGFLQNNKTSKVVEL 530
              ++Y                      MEKNG   +++  N +++G+ +  K +K  ++
Sbjct: 657 PEKVMYTTFVDGLFRAGQSKAALYFCEDMEKNGLCADLIATNVILNGYSRMGKMAKAGDI 716

Query: 531 LHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECS 565
              M      + P   T++I++   AK +   +CS
Sbjct: 717 F-TMMWSGITISPSLATYNILLHGYAKKKNLSKCS 750



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 135/582 (23%), Positives = 247/582 (42%), Gaps = 89/582 (15%)

Query: 44   FLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVS 103
             ++  CK+G  ++ EA   +  M+ +         N+L  ++ K+        F+  +  
Sbjct: 454  LIYNYCKTG--DVVEAFKVYVAMSRIGYDANCFICNVLVSSLCKDGKVGVAEYFFHHMSK 511

Query: 104  IGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFC 163
            IG +P+ +T + +IN +GN   GL       +A  +F  MI  G  P   TYG L+   C
Sbjct: 512  IGNVPNSITFDCIINGYGNSGNGL-------KAFSMFDEMIKAGHHPSHFTYGGLLKALC 564

Query: 164  RTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRG 223
            R G    A RL  K+      + + S  +  +Y+ I+    K G++  A  LF EM  R 
Sbjct: 565  RAGKFKEAKRLLDKL------HYIPSAVDTVTYNTILVETFKSGMLTDAVALFDEMVQRN 618

Query: 224  INPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGP-RPNLLTFNVMIDCLCKGGKINEA 282
            + P       +  G    G        +  +L  G   P  + +   +D L + G+   A
Sbjct: 619  VLPDSYTYAIIFAGLIRRGKMVAALHFYGNLLGKGAVSPEKVMYTTFVDGLFRAGQSKAA 678

Query: 283  NGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSK-GCKHTVVSYNILIN 341
                E M + GL  D    N +++GY  +G++  A +IF  M S      ++ +YNIL++
Sbjct: 679  LYFCEDMEKNGLCADLIATNVILNGYSRMGKMAKAGDIFTMMWSGITISPSLATYNILLH 738

Query: 342  GYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAG------------------- 382
            GY K  N+ +  +LY  ++  G+    +T ++L+ G  ++                    
Sbjct: 739  GYAKKKNLSKCSNLYNIMMRTGIFPDKLTCHSLILGFCKSAMLDVGLKLLKKMLLDGVAV 798

Query: 383  ----------------QAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLF 426
                            + G A  L + M L+++ PD++T++ +I  L + + VQE+  L 
Sbjct: 799  DQCTFNMLIMKYCETDEVGKAFDLVNIMNLFDIFPDMTTHDSIISVLSRVSTVQESHLLL 858

Query: 427  H-MLEMN-------------------------KFEFGIEIF---------NCLIDGLCKA 451
            H MLE                           K +  +E           + L+ GL K 
Sbjct: 859  HEMLERGCIPDRRQYIALVNRMCRMGHIHGAFKLKDEMEALGISSGDVAESALVRGLAKC 918

Query: 452  GRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTF 511
            G+++ A  +   + +K L+PT+ T++ ++H  CR   L +A      M+      +V+ +
Sbjct: 919  GKVEEAKLVLDFMLRKSLIPTIATFTTLMHMFCRNESLVEALKLKDTMDFCDVKLDVIAY 978

Query: 512  NTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
            N L+ G   +   +  ++L  ++   +R L P+ TT+ I++D
Sbjct: 979  NVLISGLCADGDVASALKLYKEI--KQRGLWPNMTTYCILID 1018



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 112/446 (25%), Positives = 214/446 (47%), Gaps = 21/446 (4%)

Query: 42   NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
            N  L E  KSG+  L +A   F  M      P   ++ ++F  + +     A + FY  L
Sbjct: 592  NTILVETFKSGM--LTDAVALFDEMVQRNVLPDSYTYAIIFAGLIRRGKMVAALHFYGNL 649

Query: 102  VSIGLL-PDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLIN 160
            +  G + P+ +     ++       GL    + K A +  ++M   G+  D+I    ++N
Sbjct: 650  LGKGAVSPEKVMYTTFVD-------GLFRAGQSKAALYFCEDMEKNGLCADLIATNVILN 702

Query: 161  GFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMK 220
            G+ R G ++ A  +   M SG     +    ++ +Y+I++    K+  + K   L+  M 
Sbjct: 703  GYSRMGKMAKAGDIFTMMWSG-----ITISPSLATYNILLHGYAKKKNLSKCSNLYNIMM 757

Query: 221  GRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKIN 280
              GI P  + C +LI GFC +   +    L  +ML  G   +  TFN++I   C+  ++ 
Sbjct: 758  RTGIFPDKLTCHSLILGFCKSAMLDVGLKLLKKMLLDGVAVDQCTFNMLIMKYCETDEVG 817

Query: 281  EANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMH---SKGCKHTVVSYN 337
            +A  L+ +M    + PD  T++S++    ++ R+ T +E  L +H    +GC      Y 
Sbjct: 818  KAFDLVNIMNLFDIFPDMTTHDSIIS---VLSRVSTVQESHLLLHEMLERGCIPDRRQYI 874

Query: 338  ILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLY 397
             L+N  C++ ++  A  L  ++ + G+    +  + L+ GL + G+   A+ + D M   
Sbjct: 875  ALVNRMCRMGHIHGAFKLKDEMEALGISSGDVAESALVRGLAKCGKVEEAKLVLDFMLRK 934

Query: 398  NVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNA 457
            ++ P ++T+  L+   C+N  + EA+KL   ++    +  +  +N LI GLC  G + +A
Sbjct: 935  SLIPTIATFTTLMHMFCRNESLVEALKLKDTMDFCDVKLDVIAYNVLISGLCADGDVASA 994

Query: 458  WELFHKLPQKGLVPTVVTYSIMIHGL 483
             +L+ ++ Q+GL P + TY I+I  +
Sbjct: 995  LKLYKEIKQRGLWPNMTTYCILIDAI 1020



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 85/314 (27%), Positives = 158/314 (50%), Gaps = 13/314 (4%)

Query: 104  IGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFC 163
            I + P   T NIL++ +  K+        + + + L+  M+  G+ PD +T  +LI GFC
Sbjct: 724  ITISPSLATYNILLHGYAKKKN-------LSKCSNLYNIMMRTGIFPDKLTCHSLILGFC 776

Query: 164  RTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRG 223
            ++  L V L+L KKM+     +G+    +  +++++I   C+   V KA +L   M    
Sbjct: 777  KSAMLDVGLKLLKKMLL----DGV--AVDQCTFNMLIMKYCETDEVGKAFDLVNIMNLFD 830

Query: 224  INPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEAN 283
            I P +    ++I         +E + L  EML+ G  P+   +  +++ +C+ G I+ A 
Sbjct: 831  IFPDMTTHDSIISVLSRVSTVQESHLLLHEMLERGCIPDRRQYIALVNRMCRMGHIHGAF 890

Query: 284  GLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGY 343
             L + M   G++      ++L+ G    G+++ A+ +   M  K    T+ ++  L++ +
Sbjct: 891  KLKDEMEALGISSGDVAESALVRGLAKCGKVEEAKLVLDFMLRKSLIPTIATFTTLMHMF 950

Query: 344  CKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDL 403
            C+  ++ EA+ L   +    V+  VI YN L+SGL   G    A KL+ E+K   + P++
Sbjct: 951  CRNESLVEALKLKDTMDFCDVKLDVIAYNVLISGLCADGDVASALKLYKEIKQRGLWPNM 1010

Query: 404  STYNILIDGLCKNN 417
            +TY ILID +  N+
Sbjct: 1011 TTYCILIDAIFTND 1024


>gi|242045792|ref|XP_002460767.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
 gi|241924144|gb|EER97288.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
          Length = 762

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 125/365 (34%), Positives = 195/365 (53%), Gaps = 6/365 (1%)

Query: 185 NGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNW 244
            GL  K N+ SY+I++  LC  G V+ A++LF EM      P VV    LIHG+C  G  
Sbjct: 255 QGLPDK-NVCSYNILLKVLCGAGRVEDARQLFDEMAS---PPDVVTYGILIHGYCALGEL 310

Query: 245 EEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSL 304
           E    L  +M+  G  PN   +  ++  LC  G++++A  ++E M+   +  D   Y ++
Sbjct: 311 ENAVKLLDDMVARGVEPNATVYTSVVALLCDKGRVSDALTVVEDMVHHKVILDEAVYTTV 370

Query: 305 MDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGV 364
           + G+C  G + +AR  F  M  KG     V+Y  LING C+   ++EA  + +++++  +
Sbjct: 371 LSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRL 430

Query: 365 RQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVK 424
               +TY  L+ G  + G+   A ++ + M    V P++ TY  L DGLCK   VQ A +
Sbjct: 431 DVDEVTYTVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANE 490

Query: 425 LFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLC 484
           L H +     E     +N LI+GLCKAG LD A      +   GL P V TY+ +I  LC
Sbjct: 491 LLHEMSNKGLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALC 550

Query: 485 RKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPD 544
           + G+L++A+D L  M  NG  P +VT+N LM+GF  + +     +LL  M   E+N+ P+
Sbjct: 551 KSGELDRAHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWML--EKNIHPN 608

Query: 545 DTTFS 549
            TT++
Sbjct: 609 ATTYN 613



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 148/530 (27%), Positives = 248/530 (46%), Gaps = 29/530 (5%)

Query: 22  SSLFKSPRQIAAVSSPETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLL 81
           + L +  RQ     SPE   N  L        + L+EA   F  +    P   + S+N+L
Sbjct: 220 APLLRRVRQYGISPSPEA-CNAVLSR------LPLDEAIELFQGL----PDKNVCSYNIL 268

Query: 82  FGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFK 141
              +      +     + ++ S    PD +T  ILI+       G C    ++ A  L  
Sbjct: 269 LKVLCGAGRVEDARQLFDEMASP---PDVVTYGILIH-------GYCALGELENAVKLLD 318

Query: 142 NMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIID 201
           +M+A GV P+   Y +++   C  G +S AL + + MV     + +I    +  Y+ ++ 
Sbjct: 319 DMVARGVEPNATVYTSVVALLCDKGRVSDALTVVEDMV----HHKVILDEAV--YTTVLS 372

Query: 202 SLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRP 261
             C +G +  A+  F EM+ +G+    V  TTLI+G C AG  +E   +  EML      
Sbjct: 373 GFCNKGDLVSARRWFDEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRLDV 432

Query: 262 NLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIF 321
           + +T+ V++D  CK GK+ EA  +   M+QRG+ P+  TY +L DG C  G +  A E+ 
Sbjct: 433 DEVTYTVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELL 492

Query: 322 LSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQA 381
             M +KG +    +YN LING CK   +++AM     + + G++  V TY TL+  L ++
Sbjct: 493 HEMSNKGLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKS 552

Query: 382 GQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFH-MLEMNKFEFGIEI 440
           G+   A  L  EM    ++P + TYN+L++G C +  V+   KL   MLE N        
Sbjct: 553 GELDRAHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKN-IHPNATT 611

Query: 441 FNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYME 500
           +N L+   C    + +  E++  +  + + P   TY+I+I G C+   +++A  F   M 
Sbjct: 612 YNSLMKQYCIGNNMKSTTEIYKGMCSRNVEPNENTYNILIKGHCKARSMKEAQYFHNEMI 671

Query: 501 KNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSI 550
           + G      +++ L+    +  K  +  +L H M +      PD   F I
Sbjct: 672 EKGFRLTASSYSALIRLLNKKKKFVEARKLFHDMRKEGFTAEPDVYNFYI 721



 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 144/523 (27%), Positives = 245/523 (46%), Gaps = 39/523 (7%)

Query: 9   CLFSSETVSKVKLSSLFKSPRQIAAVSS--------------PETQL---NEFLHENCKS 51
           CL S+  + +V+   +  SP    AV S              P+  +   N  L   C +
Sbjct: 216 CLPSAPLLRRVRQYGISPSPEACNAVLSRLPLDEAIELFQGLPDKNVCSYNILLKVLCGA 275

Query: 52  GIINLNEARYFFGYMTHMQPSPP-ISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDF 110
           G +   +AR  F  M     SPP + ++ +L          +  +     +V+ G+ P+ 
Sbjct: 276 GRVE--DARQLFDEMA----SPPDVVTYGILIHGYCALGELENAVKLLDDMVARGVEPNA 329

Query: 111 LTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSV 170
                ++         LC + R+ +A  + ++M+   V  D   Y T+++GFC  G+L  
Sbjct: 330 TVYTSVVAL-------LCDKGRVSDALTVVEDMVHHKVILDEAVYTTVLSGFCNKGDLVS 382

Query: 171 ALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVV 230
           A R   +M       GL   T+  +Y+ +I+ LC+ G + +A+++  EM  R ++   V 
Sbjct: 383 ARRWFDEM----QRKGLA--TDGVTYTTLINGLCRAGELKEAEKVLQEMLARRLDVDEVT 436

Query: 231 CTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMI 290
            T L+ G+C  G   E   +   M+  G  PN++T+  + D LCK G +  AN LL  M 
Sbjct: 437 YTVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMS 496

Query: 291 QRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVE 350
            +GL  +  TYNSL++G C  G +D A      M + G K  V +Y  LI+  CK   ++
Sbjct: 497 NKGLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELD 556

Query: 351 EAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILI 410
            A  L ++++ NG++ T++TYN L++G   +G+    +KL + M   N+ P+ +TYN L+
Sbjct: 557 RAHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTYNSLM 616

Query: 411 DGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLV 470
              C  N ++   +++  +     E     +N LI G CKA  +  A    +++ +KG  
Sbjct: 617 KQYCIGNNMKSTTEIYKGMCSRNVEPNENTYNILIKGHCKARSMKEAQYFHNEMIEKGFR 676

Query: 471 PTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNG--CAPNVVTF 511
            T  +YS +I  L +K K  +A      M K G    P+V  F
Sbjct: 677 LTASSYSALIRLLNKKKKFVEARKLFHDMRKEGFTAEPDVYNF 719



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 109/350 (31%), Positives = 178/350 (50%), Gaps = 13/350 (3%)

Query: 97  FYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYG 156
           ++ ++   GL  D +T   LIN       GLC    +KEA  + + M+A  +  D +TY 
Sbjct: 386 WFDEMQRKGLATDGVTYTTLIN-------GLCRAGELKEAEKVLQEMLARRLDVDEVTYT 438

Query: 157 TLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELF 216
            L++G+C+ G ++ A ++H  MV    + G+    N+ +Y+ + D LCK+G V  A EL 
Sbjct: 439 VLVDGYCKRGKMAEAFQVHNTMV----QRGVAP--NVVTYTALSDGLCKQGDVQAANELL 492

Query: 217 LEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKG 276
            EM  +G+        +LI+G C AG  ++      +M   G +P++ T+  +ID LCK 
Sbjct: 493 HEMSNKGLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKS 552

Query: 277 GKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSY 336
           G+++ A+ LL+ M+  G+ P   TYN LM+G+C+ GR++  +++   M  K       +Y
Sbjct: 553 GELDRAHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTY 612

Query: 337 NILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKL 396
           N L+  YC   N++    +Y+ + S  V     TYN L+ G  +A     AQ   +EM  
Sbjct: 613 NSLMKQYCIGNNMKSTTEIYKGMCSRNVEPNENTYNILIKGHCKARSMKEAQYFHNEMIE 672

Query: 397 YNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLID 446
                  S+Y+ LI  L K     EA KLFH +    F    +++N  ID
Sbjct: 673 KGFRLTASSYSALIRLLNKKKKFVEARKLFHDMRKEGFTAEPDVYNFYID 722


>gi|357485117|ref|XP_003612846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355514181|gb|AES95804.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 892

 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 140/513 (27%), Positives = 245/513 (47%), Gaps = 46/513 (8%)

Query: 75  ISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIK 134
           I S N L   + ++   D V   +  L+  G  P+  T  I++N F    RG+     I+
Sbjct: 171 IMSCNFLLKCLVEDNRVDGVRLLFEVLIKFGPRPNIHTYTIMMNFFC---RGVGCSVDIR 227

Query: 135 EATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIF 194
            A+ +   +   G  P+V+TYGT I G C+ G   VA RL + +   +         N  
Sbjct: 228 RASEILGKIYMSGETPNVVTYGTYIKGLCKVGLFGVAWRLIQNLCRKN------QPLNNH 281

Query: 195 SYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEM 254
            ++ +I  LC+ G++D+A E+F EMK  GI P V   + LI GFC  G  ++ + +F EM
Sbjct: 282 CFNAVIYGLCQGGILDEASEVFKEMKNSGILPDVYSYSILIDGFCRKGRVDQASEVFKEM 341

Query: 255 LDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRI 314
            + G  PN+ +++++ID  CK G++++A  + E M   G+ PD ++Y+ L+DG+C  G +
Sbjct: 342 RNSGILPNIYSYSILIDGFCKEGRVDKALEVFEEMKNSGILPDVYSYSILIDGFCRKGDM 401

Query: 315 DTAREIFLSMHSKGCKHTVVSYNILINGY------------------------------- 343
           D+A + +  M S     +  +Y  LI GY                               
Sbjct: 402 DSAIKFWEEMTSNNFSPSAFNYCSLIKGYYKSKQFANALKEFRIMQKLGMWPDTIACNHI 461

Query: 344 ----CKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNV 399
               C+  +  +A++L  +   NGV     +YN  +  + +      A +L   M   NV
Sbjct: 462 LSIYCRKPDFNKALALSEKFQENGVHFNPYSYNEFIHRICRGSVPEKALQLLPVMLKRNV 521

Query: 400 EPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWE 459
            PD+  Y+ LI    K    ++AV LF  +      F ++ +  LI+      ++D A+ 
Sbjct: 522 LPDVVNYSTLISCFAKRLNSEKAVMLFIKMTKVGITFNVKTYTILINLFISDCKMDVAYR 581

Query: 460 LFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFL 519
           LF  + +  + P  + Y+ ++ G C  G++ +A      M + GC+PNVVT+   ++ +L
Sbjct: 582 LFKGMKESRVYPDQIAYTSLVAGFCNTGEMTRARALFDEMSREGCSPNVVTYTCFINEYL 641

Query: 520 QNNKTSKVVELLHKMAEPERNLVPDDTTFSIVV 552
           + NK ++  +L  KM   ER + PD   +++++
Sbjct: 642 KLNKNNQAHKLYEKMK--ERGVYPDQILYTMLI 672



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 135/453 (29%), Positives = 218/453 (48%), Gaps = 42/453 (9%)

Query: 118 NCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKK 177
           +CF     GLC    + EA+ +FK M   G+ PDV +Y  LI+GFCR G +  A  + K+
Sbjct: 281 HCFNAVIYGLCQGGILDEASEVFKEMKNSGILPDVYSYSILIDGFCRKGRVDQASEVFKE 340

Query: 178 MVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHG 237
           M +    +G++   NI+SYSI+ID  CKEG VDKA E+F EMK  GI P V   + LI G
Sbjct: 341 MRN----SGILP--NIYSYSILIDGFCKEGRVDKALEVFEEMKNSGILPDVYSYSILIDG 394

Query: 238 FCCAGN-------WEEV--------------------------NGL--FIEMLDLGPRPN 262
           FC  G+       WEE+                          N L  F  M  LG  P+
Sbjct: 395 FCRKGDMDSAIKFWEEMTSNNFSPSAFNYCSLIKGYYKSKQFANALKEFRIMQKLGMWPD 454

Query: 263 LLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFL 322
            +  N ++   C+    N+A  L E   + G++ + ++YN  +   C     + A ++  
Sbjct: 455 TIACNHILSIYCRKPDFNKALALSEKFQENGVHFNPYSYNEFIHRICRGSVPEKALQLLP 514

Query: 323 SMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAG 382
            M  +     VV+Y+ LI+ + K LN E+A+ L+ ++   G+   V TY  L++      
Sbjct: 515 VMLKRNVLPDVVNYSTLISCFAKRLNSEKAVMLFIKMTKVGITFNVKTYTILINLFISDC 574

Query: 383 QAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFN 442
           +   A +LF  MK   V PD   Y  L+ G C    +  A  LF  +        +  + 
Sbjct: 575 KMDVAYRLFKGMKESRVYPDQIAYTSLVAGFCNTGEMTRARALFDEMSREGCSPNVVTYT 634

Query: 443 CLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKN 502
           C I+   K  + + A +L+ K+ ++G+ P  + Y+++I   C  G++ +A      M++ 
Sbjct: 635 CFINEYLKLNKNNQAHKLYEKMKERGVYPDQILYTMLIAAFCNTGEMNRAEALFDEMKQE 694

Query: 503 G-CAPNVVTFNTLMHGFLQNNKTSKVVELLHKM 534
           G C PNVV +  L++ +++ NK  +  +L  +M
Sbjct: 695 GRCTPNVVMYTCLINSYIKLNKRDQAEKLYEEM 727



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 102/409 (24%), Positives = 192/409 (46%), Gaps = 42/409 (10%)

Query: 188 ISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEV 247
           + K+N+  + ++I       +++ A  +F+  K  GI   ++ C  L+         + V
Sbjct: 132 VEKSNVV-FDMLIKVFASNSMLEHANYVFVRAKDDGIELNIMSCNFLLKCLVEDNRVDGV 190

Query: 248 NGLFIEMLDLGPRPNLLTFNVMIDCLCKG----GKINEANGLLELMIQRGLNPDRFTYNS 303
             LF  ++  GPRPN+ T+ +M++  C+G      I  A+ +L  +   G  P+  TY +
Sbjct: 191 RLLFEVLIKFGPRPNIHTYTIMMNFFCRGVGCSVDIRRASEILGKIYMSGETPNVVTYGT 250

Query: 304 LMDGYCLVGR-----------------------------------IDTAREIFLSMHSKG 328
            + G C VG                                    +D A E+F  M + G
Sbjct: 251 YIKGLCKVGLFGVAWRLIQNLCRKNQPLNNHCFNAVIYGLCQGGILDEASEVFKEMKNSG 310

Query: 329 CKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQ 388
               V SY+ILI+G+C+   V++A  +++++ ++G+   + +Y+ L+ G  + G+   A 
Sbjct: 311 ILPDVYSYSILIDGFCRKGRVDQASEVFKEMRNSGILPNIYSYSILIDGFCKEGRVDKAL 370

Query: 389 KLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGL 448
           ++F+EMK   + PD+ +Y+ILIDG C+   +  A+K +  +  N F      +  LI G 
Sbjct: 371 EVFEEMKNSGILPDVYSYSILIDGFCRKGDMDSAIKFWEEMTSNNFSPSAFNYCSLIKGY 430

Query: 449 CKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNV 508
            K+ +  NA + F  + + G+ P  +  + ++   CRK    KA       ++NG   N 
Sbjct: 431 YKSKQFANALKEFRIMQKLGMWPDTIACNHILSIYCRKPDFNKALALSEKFQENGVHFNP 490

Query: 509 VTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAK 557
            ++N  +H   + +   K ++LL  M   +RN++PD   +S ++   AK
Sbjct: 491 YSYNEFIHRICRGSVPEKALQLLPVML--KRNVLPDVVNYSTLISCFAK 537



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 98/350 (28%), Positives = 175/350 (50%), Gaps = 6/350 (1%)

Query: 224 INPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEAN 283
           +  + VV   LI  F      E  N +F+   D G   N+++ N ++ CL +  +++   
Sbjct: 132 VEKSNVVFDMLIKVFASNSMLEHANYVFVRAKDDGIELNIMSCNFLLKCLVEDNRVDGVR 191

Query: 284 GLLELMIQRGLNPDRFTYNSLMDGYCL-VG---RIDTAREIFLSMHSKGCKHTVVSYNIL 339
            L E++I+ G  P+  TY  +M+ +C  VG    I  A EI   ++  G    VV+Y   
Sbjct: 192 LLFEVLIKFGPRPNIHTYTIMMNFFCRGVGCSVDIRRASEILGKIYMSGETPNVVTYGTY 251

Query: 340 INGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNV 399
           I G CK+     A  L + +           +N ++ GL Q G    A ++F EMK   +
Sbjct: 252 IKGLCKVGLFGVAWRLIQNLCRKNQPLNNHCFNAVIYGLCQGGILDEASEVFKEMKNSGI 311

Query: 400 EPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWE 459
            PD+ +Y+ILIDG C+   V +A ++F  +  +     I  ++ LIDG CK GR+D A E
Sbjct: 312 LPDVYSYSILIDGFCRKGRVDQASEVFKEMRNSGILPNIYSYSILIDGFCKEGRVDKALE 371

Query: 460 LFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFL 519
           +F ++   G++P V +YSI+I G CRKG ++ A  F   M  N  +P+   + +L+ G+ 
Sbjct: 372 VFEEMKNSGILPDVYSYSILIDGFCRKGDMDSAIKFWEEMTSNNFSPSAFNYCSLIKGYY 431

Query: 520 QNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSK 569
           ++ + +  ++    M   +  + PD    + ++ +  +   +++  A+S+
Sbjct: 432 KSKQFANALKEFRIMQ--KLGMWPDTIACNHILSIYCRKPDFNKALALSE 479



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 120/450 (26%), Positives = 199/450 (44%), Gaps = 49/450 (10%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           C+ G   +++A   F  M +    P I S+++L     K    D  +  + ++ + G+LP
Sbjct: 326 CRKG--RVDQASEVFKEMRNSGILPNIYSYSILIDGFCKEGRVDKALEVFEEMKNSGILP 383

Query: 109 DFLTLNILINCFGNKE----------------------------RGLCVENRIKEATWLF 140
           D  + +ILI+ F  K                             +G     +   A   F
Sbjct: 384 DVYSYSILIDGFCRKGDMDSAIKFWEEMTSNNFSPSAFNYCSLIKGYYKSKQFANALKEF 443

Query: 141 KNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIII 200
           + M   G+ PD I    +++ +CR  + + AL L +K      ENG+    N +SY+  I
Sbjct: 444 RIMQKLGMWPDTIACNHILSIYCRKPDFNKALALSEKF----QENGV--HFNPYSYNEFI 497

Query: 201 DSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPR 260
             +C+  + +KA +L   M  R + P VV  +TLI  F    N E+   LFI+M  +G  
Sbjct: 498 HRICRGSVPEKALQLLPVMLKRNVLPDVVNYSTLISCFAKRLNSEKAVMLFIKMTKVGIT 557

Query: 261 PNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREI 320
            N+ T+ ++I+      K++ A  L + M +  + PD+  Y SL+ G+C  G +  AR +
Sbjct: 558 FNVKTYTILINLFISDCKMDVAYRLFKGMKESRVYPDQIAYTSLVAGFCNTGEMTRARAL 617

Query: 321 FLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQ 380
           F  M  +GC   VV+Y   IN Y K+    +A  LY ++   GV    I Y  L++    
Sbjct: 618 FDEMSREGCSPNVVTYTCFINEYLKLNKNNQAHKLYEKMKERGVYPDQILYTMLIAAFCN 677

Query: 381 AGQAGYAQKLFDEMKLY-NVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIE 439
            G+   A+ LFDEMK      P++  Y  LI+   K N   +A KL+  +          
Sbjct: 678 TGEMNRAEALFDEMKQEGRCTPNVVMYTCLINSYIKLNKRDQAEKLYEEMRAKG------ 731

Query: 440 IFNCLIDGLCKA-GRLDNAWELFHKLPQKG 468
                +  LC + G +  +W   H++ + G
Sbjct: 732 -----LSRLCSSEGSVSESWCCRHQVLKTG 756



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 52/253 (20%), Positives = 103/253 (40%), Gaps = 33/253 (13%)

Query: 334 VSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDE 393
           V +++LI  +     +E A  ++ +   +G+   +++ N LL  L +  +    + LF+ 
Sbjct: 137 VVFDMLIKVFASNSMLEHANYVFVRAKDDGIELNIMSCNFLLKCLVEDNRVDGVRLLFEV 196

Query: 394 MKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGR 453
           +  +   P++ TY I+++  C+                           C +D       
Sbjct: 197 LIKFGPRPNIHTYTIMMNFFCRG------------------------VGCSVD------- 225

Query: 454 LDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNT 513
           +  A E+  K+   G  P VVTY   I GLC+ G    A   +  + +     N   FN 
Sbjct: 226 IRRASEILGKIYMSGETPNVVTYGTYIKGLCKVGLFGVAWRLIQNLCRKNQPLNNHCFNA 285

Query: 514 LMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKSSYR 573
           +++G  Q     +  E+  +M      ++PD  ++SI++D   +  +  + S V K    
Sbjct: 286 VIYGLCQGGILDEASEVFKEMKNS--GILPDVYSYSILIDGFCRKGRVDQASEVFKEMRN 343

Query: 574 ACLYVTIFQPSSL 586
           + +   I+  S L
Sbjct: 344 SGILPNIYSYSIL 356


>gi|297797161|ref|XP_002866465.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297312300|gb|EFH42724.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 977

 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 164/607 (27%), Positives = 265/607 (43%), Gaps = 74/607 (12%)

Query: 46  HENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIG 105
            E   +  +N++EA      M+     P   S+NLL   + K +  +   S   ++ S+G
Sbjct: 251 EEELGTATLNVDEALELKKSMSCKGLVPSRQSYNLLIDGLCKQKRLEDAKSLLVEMNSVG 310

Query: 106 LLPDFLTLNILINCF-----GNKERGL--------------------CV---ENRIKEAT 137
           L  D +  +ILI+        +   GL                    CV   E  +++A 
Sbjct: 311 LFADNVAYSILIDGLLKGRNADAANGLVHEMVSHGFSIDPMMYDYFICVMSKEGAMEKAK 370

Query: 138 WLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYS 197
            LF  MI FGV P    Y +LI GF R  N+     L   +V     N +IS    ++Y 
Sbjct: 371 ALFDGMITFGVTPGARAYASLIEGFFREKNVRKGYEL---LVEIKKRNIVISP---YTYG 424

Query: 198 IIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDL 257
             +  +C  G +D A  +  EM   G  P VV+ TTLI  F     + +   +  EM + 
Sbjct: 425 TAVKGMCSSGDLDGAYNIVKEMGASGCRPNVVIYTTLIKTFLQKSRFGDAVRVLKEMREQ 484

Query: 258 GPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTA 317
           G  P+   +N +I  L K  K++EA   L  M++ G  PD FTY + + GY   G   +A
Sbjct: 485 GIAPDTFCYNSLIIGLSKAKKMDEARSFLLEMVENGFKPDAFTYGAFISGYIEAGEFASA 544

Query: 318 REIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSG 377
            +    M   G     V    LIN YCK   V EA S +R ++  G+     TY  L++G
Sbjct: 545 DKYVKEMLECGVIPNKVLCTGLINEYCKKGKVIEACSAFRSMVEQGILGDAKTYTVLMNG 604

Query: 378 LFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFG 437
           L + G+   A+++F EM+   + PD+ +Y  LIDG  K   +Q+A  +F  +        
Sbjct: 605 LVKNGKVNDAEEIFHEMRGKGIAPDVFSYGTLIDGFSKLGNMQKASSIFDEMVQAGLTSN 664

Query: 438 IEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLL 497
           + I+N L+ G C++G ++ A EL  ++  KG  P  VTY  +I G C+ G L +A  F L
Sbjct: 665 VIIYNMLLGGFCRSGEIEKAKELLDEMSGKGFPPNAVTYCTIIDGYCKSGDLAEA--FQL 722

Query: 498 YME------------------------------------KNGCAPNVVTFNTLMHGFLQN 521
           + E                                    + GCA +   FN L++   + 
Sbjct: 723 FDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFETNEKGCASSSAPFNALINWVFKF 782

Query: 522 NKTSKVVELLHKMAEP--ERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKSSYRACLYVT 579
            KT    ++++++ +   ++   P+D T++I++D L K+        +     +A L  T
Sbjct: 783 GKTELTTDMINRLMDGSFDKFGKPNDVTYNIMIDYLCKEGNLEAAKELFHHMQKANLMPT 842

Query: 580 IFQPSSL 586
           +   +SL
Sbjct: 843 VITYTSL 849



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 137/494 (27%), Positives = 242/494 (48%), Gaps = 31/494 (6%)

Query: 66  MTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKER 125
           M     +P    +N L   ++K +  D   SF  ++V  G  PD  T    I+       
Sbjct: 481 MREQGIAPDTFCYNSLIIGLSKAKKMDEARSFLLEMVENGFKPDAFTYGAFIS------- 533

Query: 126 GLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYEN 185
           G         A    K M+  GV P+ +    LIN +C+ G +  A    + MV    E 
Sbjct: 534 GYIEAGEFASADKYVKEMLECGVIPNKVLCTGLINEYCKKGKVIEACSAFRSMV----EQ 589

Query: 186 GLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWE 245
           G++      +Y+++++ L K G V+ A+E+F EM+G+GI P V    TLI GF   GN +
Sbjct: 590 GILGDAK--TYTVLMNGLVKNGKVNDAEEIFHEMRGKGIAPDVFSYGTLIDGFSKLGNMQ 647

Query: 246 EVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLM 305
           + + +F EM+  G   N++ +N+++   C+ G+I +A  LL+ M  +G  P+  TY +++
Sbjct: 648 KASSIFDEMVQAGLTSNVIIYNMLLGGFCRSGEIEKAKELLDEMSGKGFPPNAVTYCTII 707

Query: 306 DGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVR 365
           DGYC  G +  A ++F  M  KG       Y  L++G C++ +VE A++++ +    G  
Sbjct: 708 DGYCKSGDLAEAFQLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIF-ETNEKGCA 766

Query: 366 QTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVE----PDLSTYNILIDGLCKNNCVQE 421
            +   +N L++ +F+ G+      + + +   + +    P+  TYNI+ID LCK   ++ 
Sbjct: 767 SSSAPFNALINWVFKFGKTELTTDMINRLMDGSFDKFGKPNDVTYNIMIDYLCKEGNLEA 826

Query: 422 AVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIH 481
           A +LFH ++       +  +  L++G  K GR    + +F ++   G+ P  + YS++I+
Sbjct: 827 AKELFHHMQKANLMPTVITYTSLLNGYDKMGRRSEMFSVFDEVIAAGIEPDNIMYSVIIN 886

Query: 482 GLCRKGKLEKANDFLLYM-EKN----GCAPNVVTFNTLMHGFLQNNK---TSKVVELLHK 533
              ++G   KA   L  M  KN    GC  ++ T   L+ GF +  +     KVVE + +
Sbjct: 887 AFLKEGMTTKALVLLDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVVENMVR 946

Query: 534 MAEPERNLVPDDTT 547
           +       +PD +T
Sbjct: 947 L-----KYIPDSST 955



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 146/566 (25%), Positives = 232/566 (40%), Gaps = 107/566 (18%)

Query: 80  LLFGAVAKNRHYDAVISFYR-KLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATW 138
           L+ G + K    +AV  F   K + + L+P     N L++        L   NR+     
Sbjct: 158 LIDGYIEKGFLDEAVFVFSSTKDLDLDLVPSLARCNHLLD-------ALLKRNRLDLFWD 210

Query: 139 LFKNMIAFGVRPDVITYGTLINGFCRTGNLSV---------------------ALRLHKK 177
           ++K M+   V  DV +Y  LI   CR GN+ +                     AL L K 
Sbjct: 211 VYKGMVERNVVFDVQSYEMLIGAHCRDGNVQLAKDVLLKTEEELGTATLNVDEALELKKS 270

Query: 178 MVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHG 237
           M       GL+      SY+++ID LCK+  ++ AK L +EM   G+    V  + LI G
Sbjct: 271 MSC----KGLVPSRQ--SYNLLIDGLCKQKRLEDAKSLLVEMNSVGLFADNVAYSILIDG 324

Query: 238 FCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPD 297
                N +  NGL  EM+  G   + + ++  I  + K G + +A  L + MI  G+ P 
Sbjct: 325 LLKGRNADAANGLVHEMVSHGFSIDPMMYDYFICVMSKEGAMEKAKALFDGMITFGVTPG 384

Query: 298 RFTYNSLMDGY-----------------------------------CLVGRIDTAREIFL 322
              Y SL++G+                                   C  G +D A  I  
Sbjct: 385 ARAYASLIEGFFREKNVRKGYELLVEIKKRNIVISPYTYGTAVKGMCSSGDLDGAYNIVK 444

Query: 323 SMHSKGCKHTVV-----------------------------------SYNILINGYCKIL 347
            M + GC+  VV                                    YN LI G  K  
Sbjct: 445 EMGASGCRPNVVIYTTLIKTFLQKSRFGDAVRVLKEMREQGIAPDTFCYNSLIIGLSKAK 504

Query: 348 NVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYN 407
            ++EA S   +++ NG +    TY   +SG  +AG+   A K   EM    V P+     
Sbjct: 505 KMDEARSFLLEMVENGFKPDAFTYGAFISGYIEAGEFASADKYVKEMLECGVIPNKVLCT 564

Query: 408 ILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQK 467
            LI+  CK   V EA   F  +         + +  L++GL K G++++A E+FH++  K
Sbjct: 565 GLINEYCKKGKVIEACSAFRSMVEQGILGDAKTYTVLMNGLVKNGKVNDAEEIFHEMRGK 624

Query: 468 GLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKV 527
           G+ P V +Y  +I G  + G ++KA+     M + G   NV+ +N L+ GF ++ +  K 
Sbjct: 625 GIAPDVFSYGTLIDGFSKLGNMQKASSIFDEMVQAGLTSNVIIYNMLLGGFCRSGEIEKA 684

Query: 528 VELLHKMAEPERNLVPDDTTFSIVVD 553
            ELL +M+   +   P+  T+  ++D
Sbjct: 685 KELLDEMS--GKGFPPNAVTYCTIID 708



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 113/391 (28%), Positives = 171/391 (43%), Gaps = 79/391 (20%)

Query: 96  SFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITY 155
           S +R +V  G+L D  T  +L+N       GL    ++ +A  +F  M   G+ PDV +Y
Sbjct: 581 SAFRSMVEQGILGDAKTYTVLMN-------GLVKNGKVNDAEEIFHEMRGKGIAPDVFSY 633

Query: 156 GTLINGFCRTGNLSVALRLHKKMVS---------------GDYENGLISKT--------- 191
           GTLI+GF + GN+  A  +  +MV                G   +G I K          
Sbjct: 634 GTLIDGFSKLGNMQKASSIFDEMVQAGLTSNVIIYNMLLGGFCRSGEIEKAKELLDEMSG 693

Query: 192 -----NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFC------- 239
                N  +Y  IID  CK G + +A +LF EMK +G+ P   V TTL+ G C       
Sbjct: 694 KGFPPNAVTYCTIIDGYCKSGDLAEAFQLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVER 753

Query: 240 -----------CAG---------NW-----------EEVNGLFIEMLDLGPRPNLLTFNV 268
                      CA          NW           + +N L     D   +PN +T+N+
Sbjct: 754 AITIFETNEKGCASSSAPFNALINWVFKFGKTELTTDMINRLMDGSFDKFGKPNDVTYNI 813

Query: 269 MIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKG 328
           MID LCK G +  A  L   M +  L P   TY SL++GY  +GR      +F  + + G
Sbjct: 814 MIDYLCKEGNLEAAKELFHHMQKANLMPTVITYTSLLNGYDKMGRRSEMFSVFDEVIAAG 873

Query: 329 CKHTVVSYNILINGYCKILNVEEAMSLYRQI-----ISNGVRQTVITYNTLLSGLFQAGQ 383
            +   + Y+++IN + K     +A+ L  Q+     + +G + ++ T   LLSG  + G+
Sbjct: 874 IEPDNIMYSVIINAFLKEGMTTKALVLLDQMFAKNAVDDGCKLSISTCRALLSGFAKVGE 933

Query: 384 AGYAQKLFDEMKLYNVEPDLSTYNILIDGLC 414
              A+K+ + M      PD ST   LI+  C
Sbjct: 934 MEVAEKVVENMVRLKYIPDSSTVIELINESC 964



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 105/422 (24%), Positives = 191/422 (45%), Gaps = 45/422 (10%)

Query: 188 ISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRG-----INPAVVVCT---------- 232
           +++  + S+S +   LC  G ++KA  + + M  R      +  ++V C           
Sbjct: 92  VTEQKLDSFSFLALDLCNFGSIEKAHSVVIRMIERKWPVAEVWSSIVRCLREFVGKSDDR 151

Query: 233 -----TLIHGFCCAGNWEEVNGLF--IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGL 285
                 LI G+   G  +E   +F   + LDL   P+L   N ++D L K  +++    +
Sbjct: 152 VLLFGILIDGYIEKGFLDEAVFVFSSTKDLDLDLVPSLARCNHLLDALLKRNRLDLFWDV 211

Query: 286 LELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFL---------------------SM 324
            + M++R +  D  +Y  L+  +C  G +  A+++ L                     SM
Sbjct: 212 YKGMVERNVVFDVQSYEMLIGAHCRDGNVQLAKDVLLKTEEELGTATLNVDEALELKKSM 271

Query: 325 HSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQA 384
             KG   +  SYN+LI+G CK   +E+A SL  ++ S G+    + Y+ L+ GL +   A
Sbjct: 272 SCKGLVPSRQSYNLLIDGLCKQKRLEDAKSLLVEMNSVGLFADNVAYSILIDGLLKGRNA 331

Query: 385 GYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCL 444
             A  L  EM  +    D   Y+  I  + K   +++A  LF  +       G   +  L
Sbjct: 332 DAANGLVHEMVSHGFSIDPMMYDYFICVMSKEGAMEKAKALFDGMITFGVTPGARAYASL 391

Query: 445 IDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGC 504
           I+G  +   +   +EL  ++ ++ +V +  TY   + G+C  G L+ A + +  M  +GC
Sbjct: 392 IEGFFREKNVRKGYELLVEIKKRNIVISPYTYGTAVKGMCSSGDLDGAYNIVKEMGASGC 451

Query: 505 APNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHEC 564
            PNVV + TL+  FLQ ++    V +L +M   E+ + PD   ++ ++  L+K +K  E 
Sbjct: 452 RPNVVIYTTLIKTFLQKSRFGDAVRVLKEMR--EQGIAPDTFCYNSLIIGLSKAKKMDEA 509

Query: 565 SA 566
            +
Sbjct: 510 RS 511



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 77/311 (24%), Positives = 137/311 (44%), Gaps = 44/311 (14%)

Query: 51  SGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDF 110
           S + N+ +A   F  M     +  +  +N+L G   ++   +       ++   G  P+ 
Sbjct: 641 SKLGNMQKASSIFDEMVQAGLTSNVIIYNMLLGGFCRSGEIEKAKELLDEMSGKGFPPNA 700

Query: 111 LTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSV 170
           +T   +I+       G C    + EA  LF  M   G+ PD   Y TL++G CR  ++  
Sbjct: 701 VTYCTIID-------GYCKSGDLAEAFQLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVER 753

Query: 171 AL-------------------------RLHKKMVSGDYENGLIS-------KTNIFSYSI 198
           A+                         +  K  ++ D  N L+        K N  +Y+I
Sbjct: 754 AITIFETNEKGCASSSAPFNALINWVFKFGKTELTTDMINRLMDGSFDKFGKPNDVTYNI 813

Query: 199 IIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLG 258
           +ID LCKEG ++ AKELF  M+   + P V+  T+L++G+   G   E+  +F E++  G
Sbjct: 814 MIDYLCKEGNLEAAKELFHHMQKANLMPTVITYTSLLNGYDKMGRRSEMFSVFDEVIAAG 873

Query: 259 PRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDR-----FTYNSLMDGYCLVGR 313
             P+ + ++V+I+   K G   +A  LL+ M  +    D       T  +L+ G+  VG 
Sbjct: 874 IEPDNIMYSVIINAFLKEGMTTKALVLLDQMFAKNAVDDGCKLSISTCRALLSGFAKVGE 933

Query: 314 IDTAREIFLSM 324
           ++ A ++  +M
Sbjct: 934 MEVAEKVVENM 944


>gi|413922833|gb|AFW62765.1| hypothetical protein ZEAMMB73_408366 [Zea mays]
          Length = 820

 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 144/460 (31%), Positives = 208/460 (45%), Gaps = 19/460 (4%)

Query: 108 PDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGN 167
           P   T N LI       R LC    ++ A      M+  G RPD  T+ +LI G+CRT  
Sbjct: 127 PTGATYNALI-------RALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGYCRTQQ 179

Query: 168 LSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPA 227
           L VA  L  KM    +    +S      Y+ +I+  C+ G +D+A ELF EM      P 
Sbjct: 180 LEVAHDLFCKMPFRGFSQDAVS------YAALIEGFCEAGRIDEALELFREM----TQPD 229

Query: 228 VVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLE 287
           +     L+ G C AG  EE   +  +M +LG RP    +  ++D  C+  K  EA  +L 
Sbjct: 230 MYTHAALVKGLCDAGRGEEGLCMLQKMKELGWRPTTRAYAALVDLWCREQKAEEAEKILN 289

Query: 288 LMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKIL 347
            M   GL P   T   +++ YC  GR+  A  +F SM  KGC+  V +YN ++ G+C   
Sbjct: 290 EMFDSGLMPCVVTCTIVVNAYCREGRMSGAVRVFESMRFKGCEPNVWTYNAIVQGFCNAG 349

Query: 348 NVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYN 407
            V +AM+L  Q+   GV   V+TYN L+ G    G  G A +L   M+   +  D  TYN
Sbjct: 350 KVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIGSAFRLLRLMEGNGLAADQYTYN 409

Query: 408 ILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQK 467
           +LID LCK   V EA  LF  LE          FN +I+GLCKAG+ D A      +   
Sbjct: 410 VLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKAGKFDVACTFLENMISA 469

Query: 468 GLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKV 527
           G  P   TYS  I  LC+    ++   F+  M +    P+ V +  +++           
Sbjct: 470 GYAPDTYTYSPFIENLCKTKGSQEGLFFIDEMLQKDVKPSTVNYTIVINRLFNERNYGLA 529

Query: 528 VELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAV 567
             +  +M    +   PD  T++  V     + +  E   V
Sbjct: 530 TRIWGQMV--SQGCSPDVVTYTTSVRAYCNEGRLDEAENV 567



 Score =  215 bits (547), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 142/502 (28%), Positives = 231/502 (46%), Gaps = 36/502 (7%)

Query: 60  RYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINC 119
           R F     H  P+P  +++N L  A+ +         +   +V  G  PD  T N LI  
Sbjct: 114 RLFAHMYRHAPPAPTGATYNALIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLI-- 171

Query: 120 FGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMV 179
                 G C   +++ A  LF  M   G   D ++Y  LI GFC  G +  AL L ++M 
Sbjct: 172 -----LGYCRTQQLEVAHDLFCKMPFRGFSQDAVSYAALIEGFCEAGRIDEALELFREMT 226

Query: 180 SGDY----------------ENGLI---------SKTNIFSYSIIIDSLCKEGLVDKAKE 214
             D                 E GL           +    +Y+ ++D  C+E   ++A++
Sbjct: 227 QPDMYTHAALVKGLCDAGRGEEGLCMLQKMKELGWRPTTRAYAALVDLWCREQKAEEAEK 286

Query: 215 LFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLC 274
           +  EM   G+ P VV CT +++ +C  G       +F  M   G  PN+ T+N ++   C
Sbjct: 287 ILNEMFDSGLMPCVVTCTIVVNAYCREGRMSGAVRVFESMRFKGCEPNVWTYNAIVQGFC 346

Query: 275 KGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVV 334
             GK+ +A  LL+ M + G+ PD  TYN L+ G C+ G I +A  +   M   G      
Sbjct: 347 NAGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIGSAFRLLRLMEGNGLAADQY 406

Query: 335 SYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEM 394
           +YN+LI+  CK   V+EA SL+  +   G+R   +T+NT+++GL +AG+   A    + M
Sbjct: 407 TYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKAGKFDVACTFLENM 466

Query: 395 KLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFN--CLIDGLCKAG 452
                 PD  TY+  I+ LCK    QE   LF + EM + +      N   +I+ L    
Sbjct: 467 ISAGYAPDTYTYSPFIENLCKTKGSQEG--LFFIDEMLQKDVKPSTVNYTIVINRLFNER 524

Query: 453 RLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFN 512
               A  ++ ++  +G  P VVTY+  +   C +G+L++A + +  M+K     + + +N
Sbjct: 525 NYGLATRIWGQMVSQGCSPDVVTYTTSVRAYCNEGRLDEAENVVTEMKKCRTIVDAMAYN 584

Query: 513 TLMHGFLQNNKTSKVVELLHKM 534
           TL+ G     +T + V +L  M
Sbjct: 585 TLIDGHTSIGQTDRAVTILKHM 606



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 98/320 (30%), Positives = 157/320 (49%), Gaps = 15/320 (4%)

Query: 259 PRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAR 318
           P P   T+N +I  LC+   +  A   L LM++ G  PD FT+NSL+ GYC   +++ A 
Sbjct: 125 PAPTGATYNALIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGYCRTQQLEVAH 184

Query: 319 EIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGL 378
           ++F  M  +G     VSY  LI G+C+   ++EA+ L+R++     +  + T+  L+ GL
Sbjct: 185 DLFCKMPFRGFSQDAVSYAALIEGFCEAGRIDEALELFREM----TQPDMYTHAALVKGL 240

Query: 379 FQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGI 438
             AG+      +  +MK     P    Y  L+D  C+    +EA K+ + +    F+ G+
Sbjct: 241 CDAGRGEEGLCMLQKMKELGWRPTTRAYAALVDLWCREQKAEEAEKILNEM----FDSGL 296

Query: 439 E--IFNC--LIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKAND 494
              +  C  +++  C+ GR+  A  +F  +  KG  P V TY+ ++ G C  GK+ KA  
Sbjct: 297 MPCVVTCTIVVNAYCREGRMSGAVRVFESMRFKGCEPNVWTYNAIVQGFCNAGKVYKAMA 356

Query: 495 FLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDL 554
            L  M + G  P+VVT+N L+ G   +        LL  M      L  D  T+++++D 
Sbjct: 357 LLDQMRECGVEPDVVTYNLLIRGQCIDGHIGSAFRLLRLME--GNGLAADQYTYNVLIDA 414

Query: 555 LAKDEKYHE-CSAVSKSSYR 573
           L K  K  E CS      YR
Sbjct: 415 LCKTGKVDEACSLFDGLEYR 434



 Score =  155 bits (391), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 117/497 (23%), Positives = 213/497 (42%), Gaps = 31/497 (6%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
           P + +  ++  A  +       +  +  +   G  P+  T N ++       +G C   +
Sbjct: 298 PCVVTCTIVVNAYCREGRMSGAVRVFESMRFKGCEPNVWTYNAIV-------QGFCNAGK 350

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
           + +A  L   M   GV PDV+TY  LI G C  G++  A RL + M      NGL +  +
Sbjct: 351 VYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIGSAFRLLRLMEG----NGLAA--D 404

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
            ++Y+++ID+LCK G VD+A  LF  ++ RGI P  V   T+I+G C AG ++       
Sbjct: 405 QYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKAGKFDVACTFLE 464

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
            M+  G  P+  T++  I+ LCK     E    ++ M+Q+ + P    Y  +++      
Sbjct: 465 NMISAGYAPDTYTYSPFIENLCKTKGSQEGLFFIDEMLQKDVKPSTVNYTIVINRLFNER 524

Query: 313 RIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYN 372
               A  I+  M S+GC   VV+Y   +  YC    ++EA ++  ++         + YN
Sbjct: 525 NYGLATRIWGQMVSQGCSPDVVTYTTSVRAYCNEGRLDEAENVVTEMKKCRTIVDAMAYN 584

Query: 373 TLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILI----------------DGLCKN 416
           TL+ G    GQ   A  +   M      P+  T+ IL+                  + K 
Sbjct: 585 TLIDGHTSIGQTDRAVTILKHMTGVASMPNHFTFFILLRHLLQRRLAEHVPLKATSVWKT 644

Query: 417 NCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTY 476
             + +  +LF +++ N        +  +++G  +  RLD    L   + ++ L      Y
Sbjct: 645 IELADVFELFELMKKNSVPSSARTYLSILEGFSEERRLDEVTSLVSLMKEENLPLNEDIY 704

Query: 477 SIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAE 536
           + +++  C+      A   L  M  +G  PN++ +  L+ G     +  +  E+      
Sbjct: 705 NALVNCFCKLRMYSDAWALLCSMIGHGFLPNLIFYQYLLSGLTAEGQADRAKEIFRSSRW 764

Query: 537 PERNLVPDDTTFSIVVD 553
            E N   D+  + +++D
Sbjct: 765 KEYNT--DEIVWKVIID 779



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 104/456 (22%), Positives = 174/456 (38%), Gaps = 87/456 (19%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
           P + ++NLL      + H  +     R +   GL  D  T N+LI+        LC   +
Sbjct: 368 PDVVTYNLLIRGQCIDGHIGSAFRLLRLMEGNGLAADQYTYNVLID-------ALCKTGK 420

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDY--------- 183
           + EA  LF  +   G+RP+ +T+ T+ING C+ G   VA    + M+S  Y         
Sbjct: 421 VDEACSLFDGLEYRGIRPNSVTFNTVINGLCKAGKFDVACTFLENMISAGYAPDTYTYSP 480

Query: 184 -----------ENGLI---------SKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRG 223
                      + GL           K +  +Y+I+I+ L  E     A  ++ +M  +G
Sbjct: 481 FIENLCKTKGSQEGLFFIDEMLQKDVKPSTVNYTIVINRLFNERNYGLATRIWGQMVSQG 540

Query: 224 INPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEAN 283
            +P VV  TT +  +C  G  +E   +  EM       + + +N +ID     G+ + A 
Sbjct: 541 CSPDVVTYTTSVRAYCNEGRLDEAENVVTEMKKCRTIVDAMAYNTLIDGHTSIGQTDRAV 600

Query: 284 GLLELMIQRGLNPDRFT------------------------------------------- 300
            +L+ M      P+ FT                                           
Sbjct: 601 TILKHMTGVASMPNHFTFFILLRHLLQRRLAEHVPLKATSVWKTIELADVFELFELMKKN 660

Query: 301 --------YNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEA 352
                   Y S+++G+    R+D    +   M  +        YN L+N +CK+    +A
Sbjct: 661 SVPSSARTYLSILEGFSEERRLDEVTSLVSLMKEENLPLNEDIYNALVNCFCKLRMYSDA 720

Query: 353 MSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDG 412
            +L   +I +G    +I Y  LLSGL   GQA  A+++F   +      D   + ++IDG
Sbjct: 721 WALLCSMIGHGFLPNLIFYQYLLSGLTAEGQADRAKEIFRSSRWKEYNTDEIVWKVIIDG 780

Query: 413 LCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGL 448
             +         +  MLE  K +   E +  L + L
Sbjct: 781 FIRKGHADMCHDMISMLEQMKCKPSDETYAMLTEEL 816


>gi|242073534|ref|XP_002446703.1| hypothetical protein SORBIDRAFT_06g020845 [Sorghum bicolor]
 gi|241937886|gb|EES11031.1| hypothetical protein SORBIDRAFT_06g020845 [Sorghum bicolor]
          Length = 802

 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 146/544 (26%), Positives = 257/544 (47%), Gaps = 64/544 (11%)

Query: 71  PSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILI------------- 117
           P+P +  FN L  +    R Y       +++   G  P ++  NI I             
Sbjct: 175 PNPSL--FNSLVHSYCNARDYPYAYKLLKRMADCGCPPGYVAYNIFIGSICGGEELPSPD 232

Query: 118 ---------------NCFGNK------ERGLCVENRIKEATWLFKNMIAFGVRPDVITYG 156
                          +C  NK       R LC   +   A  + K M+  G  PD  TY 
Sbjct: 233 LLALAEKVYEEMLASSCVLNKVNTANFARCLCGMGKFDMAFQIIKVMMGKGFVPDTSTYS 292

Query: 157 TLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELF 216
            +I   C    +  A  L ++M S      +    ++++Y+I+IDS CK GL+++A+  F
Sbjct: 293 KVITFLCEAMKVEKAFLLFQEMKS------VGVNPDVYTYTILIDSFCKAGLIEQARSWF 346

Query: 217 LEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKG 276
            EM+  G +  VV  T L+H +  A    + + +F  M+D G  PN +T++ ++D LCK 
Sbjct: 347 DEMRSIGCSANVVTYTALLHAYLKAKQLPQASDIFNRMIDAGCPPNTITYSALVDGLCKA 406

Query: 277 GKINEANGLLELMIQRGLN----------------PDRFTYNSLMDGYCLVGRIDTAREI 320
           G+I +A  +   +I    N                P+  TY +L+DG C   ++  A+E+
Sbjct: 407 GEIQKACEVYTKLIGTSDNVGSDFYFEGKHTDSIAPNVVTYGALIDGLCKAHKVVDAQEL 466

Query: 321 FLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQ 380
             +M S GC+   + Y+ LI+G+CK+  ++ A  ++ ++   G   TV TY +L+  +F+
Sbjct: 467 LDAMLSNGCEPNHIIYDALIDGFCKVGKIDNAQEVFLRMSKCGYLPTVHTYTSLIDAMFK 526

Query: 381 AGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEI 440
             +   A K+  +M   +  P++ TY  +IDGLC+    Q+A+KL  M+E       +  
Sbjct: 527 DRRLDLAMKVLSQMVESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEEKGCSPNVVT 586

Query: 441 FNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYME 500
           +  LIDGL K+G++D + +LF ++  KG  P  VTY ++I+  C  G L++A+  L  M+
Sbjct: 587 YTALIDGLGKSGKVDLSLQLFIQMSTKGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEMK 646

Query: 501 KNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERN-LVPDDTTFSIVVDLLAKDE 559
           +      +  + +++ GF     + K +  L  + E E +  VP    + +++D  +K  
Sbjct: 647 QTYWPKYLQGYCSVVQGF-----SKKFIASLGLLEELESHGTVPIAPVYGLLIDNFSKAG 701

Query: 560 KYHE 563
           +  E
Sbjct: 702 RLEE 705



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 129/506 (25%), Positives = 236/506 (46%), Gaps = 22/506 (4%)

Query: 54  INLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTL 113
           + + +A   F  M  +  +P + ++ +L  +  K    +   S++ ++ SIG   + +T 
Sbjct: 302 MKVEKAFLLFQEMKSVGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSIGCSANVVTY 361

Query: 114 NILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALR 173
             L++ +   ++       + +A+ +F  MI  G  P+ ITY  L++G C+ G +  A  
Sbjct: 362 TALLHAYLKAKQ-------LPQASDIFNRMIDAGCPPNTITYSALVDGLCKAGEIQKACE 414

Query: 174 LHKKMV-------SGDYENGLISKT---NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRG 223
           ++ K++       S  Y  G  + +   N+ +Y  +ID LCK   V  A+EL   M   G
Sbjct: 415 VYTKLIGTSDNVGSDFYFEGKHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDAMLSNG 474

Query: 224 INPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEAN 283
             P  ++   LI GFC  G  +    +F+ M   G  P + T+  +ID + K  +++ A 
Sbjct: 475 CEPNHIIYDALIDGFCKVGKIDNAQEVFLRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAM 534

Query: 284 GLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGY 343
            +L  M++    P+  TY +++DG C +G    A ++   M  KGC   VV+Y  LI+G 
Sbjct: 535 KVLSQMVESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEEKGCSPNVVTYTALIDGL 594

Query: 344 CKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDL 403
            K   V+ ++ L+ Q+ + G     +TY  L++    AG    A  L  EMK       L
Sbjct: 595 GKSGKVDLSLQLFIQMSTKGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEMKQTYWPKYL 654

Query: 404 STYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHK 463
             Y  ++ G  K      ++ L   LE +       ++  LID   KAGRL+ A EL  +
Sbjct: 655 QGYCSVVQGFSKK--FIASLGLLEELESHGTVPIAPVYGLLIDNFSKAGRLEEALELHKE 712

Query: 464 LPQKGLVPTVVT---YSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQ 520
           + +      + +   Y+ +I  LC   +LEKA +    + + G  P +  F  L+ G ++
Sbjct: 713 MMELSSSLNITSKDMYTSLIQALCLASQLEKAFELYSEITRKGVVPELSVFVCLIKGLIK 772

Query: 521 NNKTSKVVELLHKMAEPERNLVPDDT 546
            NK ++ ++L + + +   N   +++
Sbjct: 773 VNKWNEALQLCYSICDEGVNWQSNNS 798



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 128/464 (27%), Positives = 228/464 (49%), Gaps = 38/464 (8%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CK+G+I   +AR +F  M  +  S  + ++  L  A  K +        + +++  G  P
Sbjct: 334 CKAGLIE--QARSWFDEMRSIGCSANVVTYTALLHAYLKAKQLPQASDIFNRMIDAGCPP 391

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFG----------------VRPDV 152
           + +T + L++       GLC    I++A  ++  +I                   + P+V
Sbjct: 392 NTITYSALVD-------GLCKAGEIQKACEVYTKLIGTSDNVGSDFYFEGKHTDSIAPNV 444

Query: 153 ITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKA 212
           +TYG LI+G C+   +  A  L   M+S   E       N   Y  +ID  CK G +D A
Sbjct: 445 VTYGALIDGLCKAHKVVDAQELLDAMLSNGCE------PNHIIYDALIDGFCKVGKIDNA 498

Query: 213 KELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDC 272
           +E+FL M   G  P V   T+LI         +    +  +M++    PN++T+  MID 
Sbjct: 499 QEVFLRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAMKVLSQMVESSCTPNVVTYTAMIDG 558

Query: 273 LCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHT 332
           LC+ G+  +A  LL +M ++G +P+  TY +L+DG    G++D + ++F+ M +KGC   
Sbjct: 559 LCRIGECQKALKLLSMMEEKGCSPNVVTYTALIDGLGKSGKVDLSLQLFIQMSTKGCAPN 618

Query: 333 VVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFD 392
            V+Y +LIN  C    ++EA SL  ++      + +  Y +++ G  +   A     L +
Sbjct: 619 YVTYRVLINHCCAAGLLDEAHSLLSEMKQTYWPKYLQGYCSVVQGFSKKFIASLG--LLE 676

Query: 393 EMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLF-HMLEMNKFEFGI---EIFNCLIDGL 448
           E++ +   P    Y +LID   K   ++EA++L   M+E++     I   +++  LI  L
Sbjct: 677 ELESHGTVPIAPVYGLLIDNFSKAGRLEEALELHKEMMELSS-SLNITSKDMYTSLIQAL 735

Query: 449 CKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKA 492
           C A +L+ A+EL+ ++ +KG+VP +  +  +I GL +  K  +A
Sbjct: 736 CLASQLEKAFELYSEITRKGVVPELSVFVCLIKGLIKVNKWNEA 779



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 122/507 (24%), Positives = 202/507 (39%), Gaps = 103/507 (20%)

Query: 146 FGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCK 205
           FG RP   TY  L+      G + +  R+ K+M     E+G     + F+      +LCK
Sbjct: 34  FGYRPSGATYNALVQVLATAGQMDMGFRVQKEMS----ESGFC--MDKFTVGCFAQALCK 87

Query: 206 EGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLT 265
           EG   +  +  + ++        V+CT +I G   A  ++E       M      PN++T
Sbjct: 88  EG---RWSDALVMIEREDFKLDTVLCTQMISGLMEASLFDEAISFLHRMRCNSCIPNVVT 144

Query: 266 FNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMH 325
           +  ++    K  ++     ++ +M++ G NP+   +NSL+  YC       A ++   M 
Sbjct: 145 YRTLLTGFLKKKQLGWCKRIINMMMKEGCNPNPSLFNSLVHSYCNARDYPYAYKLLKRMA 204

Query: 326 SKGCKHTVVSYNILINGYCK-------------------------ILN------------ 348
             GC    V+YNI I   C                          +LN            
Sbjct: 205 DCGCPPGYVAYNIFIGSICGGEELPSPDLLALAEKVYEEMLASSCVLNKVNTANFARCLC 264

Query: 349 ----VEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLS 404
                + A  + + ++  G      TY+ +++ L +A +   A  LF EMK   V PD+ 
Sbjct: 265 GMGKFDMAFQIIKVMMGKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVNPDVY 324

Query: 405 TYNILIDGLCKNNCVQEAVKLFH--------------------MLEMNKFEFGIEIFN-- 442
           TY ILID  CK   +++A   F                      L+  +     +IFN  
Sbjct: 325 TYTILIDSFCKAGLIEQARSWFDEMRSIGCSANVVTYTALLHAYLKAKQLPQASDIFNRM 384

Query: 443 -------------CLIDGLCKAGRLDNAWELFHKL----------------PQKGLVPTV 473
                         L+DGLCKAG +  A E++ KL                    + P V
Sbjct: 385 IDAGCPPNTITYSALVDGLCKAGEIQKACEVYTKLIGTSDNVGSDFYFEGKHTDSIAPNV 444

Query: 474 VTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHK 533
           VTY  +I GLC+  K+  A + L  M  NGC PN + ++ L+ GF +  K     E+  +
Sbjct: 445 VTYGALIDGLCKAHKVVDAQELLDAMLSNGCEPNHIIYDALIDGFCKVGKIDNAQEVFLR 504

Query: 534 MAEPERNLVPDDTTFSIVVDLLAKDEK 560
           M++     +P   T++ ++D + KD +
Sbjct: 505 MSKC--GYLPTVHTYTSLIDAMFKDRR 529



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 83/319 (26%), Positives = 144/319 (45%), Gaps = 20/319 (6%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CK G I+   A+  F  M+     P + ++  L  A+ K+R  D  +    ++V     P
Sbjct: 490 CKVGKID--NAQEVFLRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAMKVLSQMVESSCTP 547

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           + +T   +I+       GLC     ++A  L   M   G  P+V+TY  LI+G  ++G +
Sbjct: 548 NVVTYTAMID-------GLCRIGECQKALKLLSMMEEKGCSPNVVTYTALIDGLGKSGKV 600

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
            ++L+L  +M +           N  +Y ++I+  C  GL+D+A  L  EMK       +
Sbjct: 601 DLSLQLFIQMSTKG------CAPNYVTYRVLINHCCAAGLLDEAHSLLSEMKQTYWPKYL 654

Query: 229 VVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLEL 288
               +++ GF  +  +    GL  E+   G  P    + ++ID   K G++ EA  L + 
Sbjct: 655 QGYCSVVQGF--SKKFIASLGLLEELESHGTVPIAPVYGLLIDNFSKAGRLEEALELHKE 712

Query: 289 MIQ--RGLN-PDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCK 345
           M++    LN   +  Y SL+   CL  +++ A E++  +  KG    +  +  LI G  K
Sbjct: 713 MMELSSSLNITSKDMYTSLIQALCLASQLEKAFELYSEITRKGVVPELSVFVCLIKGLIK 772

Query: 346 ILNVEEAMSLYRQIISNGV 364
           +    EA+ L   I   GV
Sbjct: 773 VNKWNEALQLCYSICDEGV 791


>gi|42408237|dbj|BAD09394.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|215678545|dbj|BAG92200.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 624

 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 159/566 (28%), Positives = 262/566 (46%), Gaps = 53/566 (9%)

Query: 8   RCLFSSETVSKVKLSSLF-KSPRQIAAVSSPETQLNEFLHENCKS-GIINLNEARYFFGY 65
           R L      S     SLF + PR  A  ++P       +   C+  G ++L  A      
Sbjct: 67  RALSDVARASPAVAISLFNRMPRAGATSAAPNIATYGIVIGCCRRLGRLDLAFATVGRVI 126

Query: 66  MTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKER 125
            T ++ SP + S  LL G   + R  DA+    R++  +G  PD  +  IL+       +
Sbjct: 127 TTGLRMSPILFS-PLLKGLCDRRRTSDAMDIVLRRMPELGCKPDLFSYTILL-------K 178

Query: 126 GLCVENRIKEATWLFKNMIAFGVR-P-DVITYGTLINGFCRTGNLSVALRLHKKMVSGDY 183
           GLC +   ++A  L   M     R P DV+ Y T+ING  R G L  A  L   M+    
Sbjct: 179 GLCDDKTSQQALDLLHIMADHKGRCPLDVVAYTTVINGLLREGQLDKAYSLFDAML---- 234

Query: 184 ENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGN 243
           + G     ++ +YS II +L K   +DKA ++F  M   G+ P  ++ T+L+HG+C +G 
Sbjct: 235 DRG--PSPDVVTYSSIISALSKTQAMDKATQVFTRMVKNGVMPDCIMYTSLVHGYCSSGK 292

Query: 244 WEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNS 303
            +E  G+F +M   G  P+++T+  ++D LCK GK  EA  + + +++RG  PD  TY +
Sbjct: 293 PKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKSTEARKIFDSLVKRGHKPDSTTYGT 352

Query: 304 LMDGYCLVG-----------------------------------RIDTAREIFLSMHSKG 328
           L+ GY   G                                   ++D A  +F +M  +G
Sbjct: 353 LLHGYATEGALVEMHDLLDLMMKKGMQLGHHIFNMIMGAYAKHNKVDEALLVFSNMRQQG 412

Query: 329 CKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQ 388
               +V+Y  +++  C    V++A+S +  + S G+   ++ + TL+ GL    +    +
Sbjct: 413 LNPDIVNYGTVLDILCTAGRVDDALSQFNSLKSEGLAPNIVVFTTLIHGLCTCDKWDKVE 472

Query: 389 KLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGL 448
           +L  EM    +  D   +N ++  LCK   V EA  LF ++     E     +N LIDG 
Sbjct: 473 ELAFEMIDRGICLDTIFFNAIMGNLCKKGRVIEAKNLFDLMVRIGIEPNTNTYNTLIDGY 532

Query: 449 CKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNV 508
           C  G++D A +L   +   G+ P+ VTY+ +I+G  + G++E     L  M+  G  P +
Sbjct: 533 CLDGKMDEAMKLLGVMVFNGVKPSDVTYNTIINGYSQNGRIEDGLTLLREMDGKGVNPGI 592

Query: 509 VTFNTLMHGFLQNNKTSKVVELLHKM 534
           VT+  L+ G  Q  +T    EL  +M
Sbjct: 593 VTYEMLLQGLFQAGRTVAAKELYLRM 618



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 121/427 (28%), Positives = 216/427 (50%), Gaps = 13/427 (3%)

Query: 75  ISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIK 134
           + ++  +   + +    D   S +  ++  G  PD +T + +I+     +        + 
Sbjct: 207 VVAYTTVINGLLREGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQA-------MD 259

Query: 135 EATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIF 194
           +AT +F  M+  GV PD I Y +L++G+C +G    A+ + KKM     E       ++ 
Sbjct: 260 KATQVFTRMVKNGVMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVE------PDVV 313

Query: 195 SYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEM 254
           +Y+ ++D LCK G   +A+++F  +  RG  P      TL+HG+   G   E++ L   M
Sbjct: 314 TYTALMDYLCKNGKSTEARKIFDSLVKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLM 373

Query: 255 LDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRI 314
           +  G +     FN+++    K  K++EA  +   M Q+GLNPD   Y +++D  C  GR+
Sbjct: 374 MKKGMQLGHHIFNMIMGAYAKHNKVDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRV 433

Query: 315 DTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTL 374
           D A   F S+ S+G    +V +  LI+G C     ++   L  ++I  G+    I +N +
Sbjct: 434 DDALSQFNSLKSEGLAPNIVVFTTLIHGLCTCDKWDKVEELAFEMIDRGICLDTIFFNAI 493

Query: 375 LSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKF 434
           +  L + G+   A+ LFD M    +EP+ +TYN LIDG C +  + EA+KL  ++  N  
Sbjct: 494 MGNLCKKGRVIEAKNLFDLMVRIGIEPNTNTYNTLIDGYCLDGKMDEAMKLLGVMVFNGV 553

Query: 435 EFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKAND 494
           +     +N +I+G  + GR+++   L  ++  KG+ P +VTY +++ GL + G+   A +
Sbjct: 554 KPSDVTYNTIINGYSQNGRIEDGLTLLREMDGKGVNPGIVTYEMLLQGLFQAGRTVAAKE 613

Query: 495 FLLYMEK 501
             L M K
Sbjct: 614 LYLRMIK 620



 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 142/550 (25%), Positives = 251/550 (45%), Gaps = 26/550 (4%)

Query: 29  RQIAAVSSPETQL-NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAK 87
           RQ A       Q+ +  L    ++ I +LN A      +    P+  IS FN +  A A 
Sbjct: 37  RQRATEPGDAHQVFDRLLKRGDRASIFDLNRA---LSDVARASPAVAISLFNRMPRAGAT 93

Query: 88  NRH-----YDAVISFYRKLVSIGLLPDFLTLNILINC--------FGNKERGLCVENRIK 134
           +       Y  VI   R+L  + L   F T+  +I          F    +GLC   R  
Sbjct: 94  SAAPNIATYGIVIGCCRRLGRLDLA--FATVGRVITTGLRMSPILFSPLLKGLCDRRRTS 151

Query: 135 EA-TWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNI 193
           +A   + + M   G +PD+ +Y  L+ G C       AL L   M        L    ++
Sbjct: 152 DAMDIVLRRMPELGCKPDLFSYTILLKGLCDDKTSQQALDLLHIMADHKGRCPL----DV 207

Query: 194 FSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIE 253
            +Y+ +I+ L +EG +DKA  LF  M  RG +P VV  +++I         ++   +F  
Sbjct: 208 VAYTTVINGLLREGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVFTR 267

Query: 254 MLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGR 313
           M+  G  P+ + +  ++   C  GK  EA G+ + M + G+ PD  TY +LMD  C  G+
Sbjct: 268 MVKNGVMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGK 327

Query: 314 IDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNT 373
              AR+IF S+  +G K    +Y  L++GY     + E   L   ++  G++     +N 
Sbjct: 328 STEARKIFDSLVKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQLGHHIFNM 387

Query: 374 LLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNK 433
           ++    +  +   A  +F  M+   + PD+  Y  ++D LC    V +A+  F+ L+   
Sbjct: 388 IMGAYAKHNKVDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSLKSEG 447

Query: 434 FEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKAN 493
               I +F  LI GLC   + D   EL  ++  +G+    + ++ ++  LC+KG++ +A 
Sbjct: 448 LAPNIVVFTTLIHGLCTCDKWDKVEELAFEMIDRGICLDTIFFNAIMGNLCKKGRVIEAK 507

Query: 494 DFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
           +    M + G  PN  T+NTL+ G+  + K  + ++LL  M      + P D T++ +++
Sbjct: 508 NLFDLMVRIGIEPNTNTYNTLIDGYCLDGKMDEAMKLLGVMV--FNGVKPSDVTYNTIIN 565

Query: 554 LLAKDEKYHE 563
             +++ +  +
Sbjct: 566 GYSQNGRIED 575



 Score = 52.0 bits (123), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 36/142 (25%), Positives = 59/142 (41%), Gaps = 9/142 (6%)

Query: 41  LNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRK 100
            N  +   CK G   + EA+  F  M  +   P  +++N L      +   D  +     
Sbjct: 490 FNAIMGNLCKKG--RVIEAKNLFDLMVRIGIEPNTNTYNTLIDGYCLDGKMDEAMKLLGV 547

Query: 101 LVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLIN 160
           +V  G+ P  +T N +IN       G     RI++   L + M   GV P ++TY  L+ 
Sbjct: 548 MVFNGVKPSDVTYNTIIN-------GYSQNGRIEDGLTLLREMDGKGVNPGIVTYEMLLQ 600

Query: 161 GFCRTGNLSVALRLHKKMVSGD 182
           G  + G    A  L+ +M+  D
Sbjct: 601 GLFQAGRTVAAKELYLRMIKWD 622


>gi|297807255|ref|XP_002871511.1| hypothetical protein ARALYDRAFT_350399 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297317348|gb|EFH47770.1| hypothetical protein ARALYDRAFT_350399 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1202

 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 131/451 (29%), Positives = 236/451 (52%), Gaps = 15/451 (3%)

Query: 108  PDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGN 167
            P     N+LI+       GLC   ++K+A  LF  M+A  + P +ITY TLI+G+C+ GN
Sbjct: 585  PTVFIYNVLID-------GLCKVRQMKDAEQLFDEMLARRLLPSLITYNTLIDGYCKDGN 637

Query: 168  LSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPA 227
               + ++ ++M + + E  LI+      ++ ++  L K G+V+ A+ +  EMK +G  P 
Sbjct: 638  PEKSFKVRERMKADNIEPSLIT------FNTLLKGLFKAGMVEDAENVLTEMKDQGFVPD 691

Query: 228  VVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLE 287
                + L  G+      +   G++   +D G + N  T +++++ LCK G+I +A  +L 
Sbjct: 692  AFTFSILFDGYSSNDKADAALGVYETAVDSGLKMNAYTCSILLNALCKEGQIEKAEEILG 751

Query: 288  LMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKIL 347
              + +GL P+   YN+++DGY   G +  AR    +M  +G K   ++YN LI  +C++ 
Sbjct: 752  REMAKGLVPNEVLYNTMIDGYSRKGDLVGARMKIDAMEKQGMKPDHLAYNCLIRTFCELG 811

Query: 348  NVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYN 407
            ++E A     ++   GV  +V TYN L+ G  +  +      L  EM+     P++ +Y 
Sbjct: 812  DMENAEQEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDLLKEMEDNGTMPNVVSYG 871

Query: 408  ILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQK 467
             LI+ LCK + + EA  +   +E       + I+N LIDG C  G++++A+    ++ +K
Sbjct: 872  TLINCLCKGSKLLEAQIVKRDMEDRGVSPNVRIYNMLIDGCCSKGKIEDAFRFSEEMFKK 931

Query: 468  GLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKV 527
            G+   +VTY+ +I GL   GKL +A D LL + + G  P+V T+N+L+ G+       + 
Sbjct: 932  GIELNLVTYNTLIDGLSMNGKLAEAEDMLLEISRKGLKPDVFTYNSLISGYRFAGNVQRC 991

Query: 528  VELLHKMAEPERNLVPDDTTFSIVVDLLAKD 558
            + L  +M      + P   T+ +++ L  K+
Sbjct: 992  IALYEEMKTS--GIKPTLKTYHLLISLCTKE 1020



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 135/494 (27%), Positives = 238/494 (48%), Gaps = 46/494 (9%)

Query: 73   PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
            P   +F++LF   + N   DA +  Y   V  GL  +  T +IL+N        LC E +
Sbjct: 690  PDAFTFSILFDGYSSNDKADAALGVYETAVDSGLKMNAYTCSILLN-------ALCKEGQ 742

Query: 133  IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
            I++A  +    +A G+ P+ + Y T+I+G+ R G+L V  R+    +    + G+  K +
Sbjct: 743  IEKAEEILGREMAKGLVPNEVLYNTMIDGYSRKGDL-VGARMK---IDAMEKQGM--KPD 796

Query: 193  IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
              +Y+ +I + C+ G ++ A++   +MK +G++P+V     LI G+     +++   L  
Sbjct: 797  HLAYNCLIRTFCELGDMENAEQEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDLLK 856

Query: 253  EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
            EM D G  PN++++  +I+CLCKG K+ EA  +   M  RG++P+   YN L+DG C  G
Sbjct: 857  EMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPNVRIYNMLIDGCCSKG 916

Query: 313  RIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYN 372
            +I+ A      M  KG +  +V+YN LI+G      + EA  +  +I   G++  V TYN
Sbjct: 917  KIEDAFRFSEEMFKKGIELNLVTYNTLIDGLSMNGKLAEAEDMLLEISRKGLKPDVFTYN 976

Query: 373  TLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHML--- 429
            +L+SG   AG       L++EMK   ++P L TY++LI  LC    ++   K+F  +   
Sbjct: 977  SLISGYRFAGNVQRCIALYEEMKTSGIKPTLKTYHLLI-SLCTKEGIELTKKIFGEMSLQ 1035

Query: 430  ---------------------------EMNKFEFGIE--IFNCLIDGLCKAGRLDNAWEL 460
                                       +M +   G++   +N LI G  K G+L     L
Sbjct: 1036 PDLLVYNGVLHCYAVHGDMDKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSL 1095

Query: 461  FHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQ 520
              ++  + + P   TY I++ G C       A  +   M++ G   +V   + L+ G  +
Sbjct: 1096 IDEMKAREMEPEADTYDIIVKGHCEMKDYMGAYVWYREMQEKGLLLDVCIGDELVSGLKE 1155

Query: 521  NNKTSKVVELLHKM 534
              ++ +   ++ +M
Sbjct: 1156 EWRSKEAENVISEM 1169



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 133/486 (27%), Positives = 230/486 (47%), Gaps = 19/486 (3%)

Query: 105 GLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCR 164
           G+ P   +L +L++        L    + +    +F N++    RP    YG  I    +
Sbjct: 512 GIFPSSDSLTLLLD-------HLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVK 564

Query: 165 TGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGI 224
             ++   L L  +M     ++  IS T +F Y+++ID LCK   +  A++LF EM  R +
Sbjct: 565 LSDVGKGLELFNRM-----KHDRISPT-VFIYNVLIDGLCKVRQMKDAEQLFDEMLARRL 618

Query: 225 NPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANG 284
            P+++   TLI G+C  GN E+   +   M      P+L+TFN ++  L K G + +A  
Sbjct: 619 LPSLITYNTLIDGYCKDGNPEKSFKVRERMKADNIEPSLITFNTLLKGLFKAGMVEDAEN 678

Query: 285 LLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYC 344
           +L  M  +G  PD FT++ L DGY    + D A  ++ +    G K    + +IL+N  C
Sbjct: 679 VLTEMKDQGFVPDAFTFSILFDGYSSNDKADAALGVYETAVDSGLKMNAYTCSILLNALC 738

Query: 345 KILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLS 404
           K   +E+A  +  + ++ G+    + YNT++ G  + G    A+   D M+   ++PD  
Sbjct: 739 KEGQIEKAEEILGREMAKGLVPNEVLYNTMIDGYSRKGDLVGARMKIDAMEKQGMKPDHL 798

Query: 405 TYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKL 464
            YN LI   C+   ++ A +  + +++      +E +N LI G  +    D  ++L  ++
Sbjct: 799 AYNCLIRTFCELGDMENAEQEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDLLKEM 858

Query: 465 PQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKT 524
              G +P VV+Y  +I+ LC+  KL +A      ME  G +PNV  +N L+ G     K 
Sbjct: 859 EDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPNVRIYNMLIDGCCSKGKI 918

Query: 525 SKVVELLHKMAEP--ERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKSSYRACLYVTIFQ 582
                   +M +   E NLV    T++ ++D L+ + K  E   +     R  L   +F 
Sbjct: 919 EDAFRFSEEMFKKGIELNLV----TYNTLIDGLSMNGKLAEAEDMLLEISRKGLKPDVFT 974

Query: 583 PSSLGS 588
            +SL S
Sbjct: 975 YNSLIS 980



 Score =  185 bits (469), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 140/519 (26%), Positives = 231/519 (44%), Gaps = 40/519 (7%)

Query: 62   FFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCF- 120
             F  M H + SP +  +N+L   + K R        + ++++  LLP  +T N LI+ + 
Sbjct: 574  LFNRMKHDRISPTVFIYNVLIDGLCKVRQMKDAEQLFDEMLARRLLPSLITYNTLIDGYC 633

Query: 121  --GNKERGLCVENRIK-------------------------EATWLFKNMIAFGVRPDVI 153
              GN E+   V  R+K                         +A  +   M   G  PD  
Sbjct: 634  KDGNPEKSFKVRERMKADNIEPSLITFNTLLKGLFKAGMVEDAENVLTEMKDQGFVPDAF 693

Query: 154  TYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAK 213
            T+  L +G+        AL +++  V    ++GL  K N ++ SI++++LCKEG ++KA+
Sbjct: 694  TFSILFDGYSSNDKADAALGVYETAV----DSGL--KMNAYTCSILLNALCKEGQIEKAE 747

Query: 214  ELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCL 273
            E+      +G+ P  V+  T+I G+   G+          M   G +P+ L +N +I   
Sbjct: 748  EILGREMAKGLVPNEVLYNTMIDGYSRKGDLVGARMKIDAMEKQGMKPDHLAYNCLIRTF 807

Query: 274  CKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTV 333
            C+ G +  A   +  M  +G++P   TYN L+ GY      D   ++   M   G    V
Sbjct: 808  CELGDMENAEQEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDLLKEMEDNGTMPNV 867

Query: 334  VSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDE 393
            VSY  LIN  CK   + EA  + R +   GV   V  YN L+ G    G+   A +  +E
Sbjct: 868  VSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPNVRIYNMLIDGCCSKGKIEDAFRFSEE 927

Query: 394  MKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGR 453
            M    +E +L TYN LIDGL  N  + EA  +   +     +  +  +N LI G   AG 
Sbjct: 928  MFKKGIELNLVTYNTLIDGLSMNGKLAEAEDMLLEISRKGLKPDVFTYNSLISGYRFAGN 987

Query: 454  LDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNT 513
            +     L+ ++   G+ PT+ TY ++I  LC K  +E        M      P+++ +N 
Sbjct: 988  VQRCIALYEEMKTSGIKPTLKTYHLLI-SLCTKEGIELTKKIFGEM---SLQPDLLVYNG 1043

Query: 514  LMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVV 552
            ++H +  +    K   L  +M E    L  D TT++ ++
Sbjct: 1044 VLHCYAVHGDMDKAFNLQKQMIEKSIGL--DKTTYNSLI 1080



 Score =  168 bits (426), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 106/376 (28%), Positives = 189/376 (50%), Gaps = 12/376 (3%)

Query: 194 FSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIE 253
           FSY ++   L +  ++ +A +LF  ++  GI P+    T L+        +     +F+ 
Sbjct: 483 FSYLLLSVLLNESKMISEAADLFFALRNEGIFPSSDSLTLLLDHLVKTKQFRVTINVFLN 542

Query: 254 MLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGR 313
           +L+   RP+   +   I    K   + +   L   M    ++P  F YN L+DG C V +
Sbjct: 543 ILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRISPTVFIYNVLIDGLCKVRQ 602

Query: 314 IDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNT 373
           +  A ++F  M ++    ++++YN LI+GYCK  N E++  +  ++ ++ +  ++IT+NT
Sbjct: 603 MKDAEQLFDEMLARRLLPSLITYNTLIDGYCKDGNPEKSFKVRERMKADNIEPSLITFNT 662

Query: 374 LLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHM----- 428
           LL GLF+AG    A+ +  EMK     PD  T++IL DG   N+    A+ ++       
Sbjct: 663 LLKGLFKAGMVEDAENVLTEMKDQGFVPDAFTFSILFDGYSSNDKADAALGVYETAVDSG 722

Query: 429 LEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGK 488
           L+MN +   I     L++ LCK G+++ A E+  +   KGLVP  V Y+ MI G  RKG 
Sbjct: 723 LKMNAYTCSI-----LLNALCKEGQIEKAEEILGREMAKGLVPNEVLYNTMIDGYSRKGD 777

Query: 489 LEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTF 548
           L  A   +  MEK G  P+ + +N L+  F +        + ++KM    + + P   T+
Sbjct: 778 LVGARMKIDAMEKQGMKPDHLAYNCLIRTFCELGDMENAEQEVNKMK--LKGVSPSVETY 835

Query: 549 SIVVDLLAKDEKYHEC 564
           +I++    +  ++ +C
Sbjct: 836 NILIGGYGRKYEFDKC 851



 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 90/354 (25%), Positives = 172/354 (48%), Gaps = 44/354 (12%)

Query: 72   SPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVEN 131
            SP + ++N+L G   +   +D      +++   G +P+ ++   LINC       LC  +
Sbjct: 829  SPSVETYNILIGGYGRKYEFDKCFDLLKEMEDNGTMPNVVSYGTLINC-------LCKGS 881

Query: 132  RIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKT 191
            ++ EA  + ++M   GV P+V  Y  LI+G C  G +  A R  ++M    ++ G+  + 
Sbjct: 882  KLLEAQIVKRDMEDRGVSPNVRIYNMLIDGCCSKGKIEDAFRFSEEM----FKKGI--EL 935

Query: 192  NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
            N+ +Y+ +ID L   G + +A+++ LE+  +G+ P V    +LI G+  AGN +    L+
Sbjct: 936  NLVTYNTLIDGLSMNGKLAEAEDMLLEISRKGLKPDVFTYNSLISGYRFAGNVQRCIALY 995

Query: 252  IEMLDLGPRPNLLTFNVMID-------------------------------CLCKGGKIN 280
             EM   G +P L T++++I                                C    G ++
Sbjct: 996  EEMKTSGIKPTLKTYHLLISLCTKEGIELTKKIFGEMSLQPDLLVYNGVLHCYAVHGDMD 1055

Query: 281  EANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILI 340
            +A  L + MI++ +  D+ TYNSL+ G   VG++   R +   M ++  +    +Y+I++
Sbjct: 1056 KAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMKAREMEPEADTYDIIV 1115

Query: 341  NGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEM 394
             G+C++ +   A   YR++   G+   V   + L+SGL +  ++  A+ +  EM
Sbjct: 1116 KGHCEMKDYMGAYVWYREMQEKGLLLDVCIGDELVSGLKEEWRSKEAENVISEM 1169



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 70/273 (25%), Positives = 134/273 (49%), Gaps = 5/273 (1%)

Query: 316 TAREIF--LSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNT 373
           + +E+F   S+ S   KH   SY +L     +   + EA  L+  + + G+  +  +   
Sbjct: 464 SPKELFSAFSLSSPSLKHDF-SYLLLSVLLNESKMISEAADLFFALRNEGIFPSSDSLTL 522

Query: 374 LLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNK 433
           LL  L +  Q      +F  +   +  P    Y   I    K + V + ++LF+ ++ ++
Sbjct: 523 LLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDR 582

Query: 434 FEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKAN 493
               + I+N LIDGLCK  ++ +A +LF ++  + L+P+++TY+ +I G C+ G  EK+ 
Sbjct: 583 ISPTVFIYNVLIDGLCKVRQMKDAEQLFDEMLARRLLPSLITYNTLIDGYCKDGNPEKSF 642

Query: 494 DFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
                M+ +   P+++TFNTL+ G  +         +L +M +  +  VPD  TFSI+ D
Sbjct: 643 KVRERMKADNIEPSLITFNTLLKGLFKAGMVEDAENVLTEMKD--QGFVPDAFTFSILFD 700

Query: 554 LLAKDEKYHECSAVSKSSYRACLYVTIFQPSSL 586
             + ++K      V +++  + L +  +  S L
Sbjct: 701 GYSSNDKADAALGVYETAVDSGLKMNAYTCSIL 733


>gi|42567170|ref|NP_194410.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332659854|gb|AEE85254.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 369

 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 127/372 (34%), Positives = 208/372 (55%), Gaps = 10/372 (2%)

Query: 143 MIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDS 202
           M+  G+ PD++T  +L+NGFC + ++  A+      V+G  E   I K ++   +I+ID+
Sbjct: 4   MMKLGIEPDIVTASSLVNGFCLSNSIKDAV-----YVAGQMEKMGI-KRDVVVDTILIDT 57

Query: 203 LCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPN 262
           LCK  LV  A E+   MK RGI+P VV  ++LI G C +G   +      EM      PN
Sbjct: 58  LCKNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPN 117

Query: 263 LLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFL 322
           ++TF+ +ID   K GK+++ + + ++MIQ  ++P+ FTY+SL+ G C+  R+D A ++  
Sbjct: 118 VITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLD 177

Query: 323 SMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAG 382
            M SKGC   VV+Y+ L NG+ K   V++ + L   +   GV    ++ NTL+ G FQAG
Sbjct: 178 LMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAG 237

Query: 383 QAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFN 442
           +   A  +F  M    + P++ +YNI++ GL  N  V++A+  F  ++  + +  I  + 
Sbjct: 238 KIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYT 297

Query: 443 CLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEK- 501
            +I G+CKA  +  A++LF+KL  K + P    Y+IMI  L R G   +A+    + +K 
Sbjct: 298 IMIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIMIAELNRAGMRTEADALNRFYQKH 357

Query: 502 ---NGCAPNVVT 510
              N  AP  V+
Sbjct: 358 VRQNESAPAEVS 369



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 109/361 (30%), Positives = 191/361 (52%), Gaps = 13/361 (3%)

Query: 100 KLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLI 159
           K++ +G+ PD +T + L+N       G C+ N IK+A ++   M   G++ DV+    LI
Sbjct: 3   KMMKLGIEPDIVTASSLVN-------GFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILI 55

Query: 160 NGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEM 219
           +  C+   +  AL + K+M     + G+    N+ +YS +I  LCK G +  A+    EM
Sbjct: 56  DTLCKNRLVVPALEVLKRM----KDRGI--SPNVVTYSSLITGLCKSGRLADAERRLHEM 109

Query: 220 KGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKI 279
             + INP V+  + LI  +   G   +V+ ++  M+ +   PN+ T++ +I  LC   ++
Sbjct: 110 DSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRV 169

Query: 280 NEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNIL 339
           +EA  +L+LMI +G  P+  TY++L +G+    R+D   ++   M  +G     VS N L
Sbjct: 170 DEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTL 229

Query: 340 INGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNV 399
           I GY +   ++ A+ ++  + SNG+   + +YN +L+GLF  G+   A   F+ M+    
Sbjct: 230 IKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRN 289

Query: 400 EPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWE 459
           + D+ TY I+I G+CK   V+EA  LF+ L+  + E   + +  +I  L +AG    A  
Sbjct: 290 DLDIITYTIMIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIMIAELNRAGMRTEADA 349

Query: 460 L 460
           L
Sbjct: 350 L 350



 Score =  158 bits (399), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 95/354 (26%), Positives = 184/354 (51%), Gaps = 2/354 (0%)

Query: 216 FLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCK 275
            L+M   GI P +V  ++L++GFC + + ++   +  +M  +G + +++   ++ID LCK
Sbjct: 1   MLKMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCK 60

Query: 276 GGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVS 335
              +  A  +L+ M  RG++P+  TY+SL+ G C  GR+  A      M SK     V++
Sbjct: 61  NRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVIT 120

Query: 336 YNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMK 395
           ++ LI+ Y K   + +  S+Y+ +I   +   V TY++L+ GL    +   A K+ D M 
Sbjct: 121 FSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMI 180

Query: 396 LYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLD 455
                P++ TY+ L +G  K++ V + +KL   +            N LI G  +AG++D
Sbjct: 181 SKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKID 240

Query: 456 NAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLM 515
            A  +F  +   GL+P + +Y+I++ GL   G++EKA     +M+K     +++T+  ++
Sbjct: 241 LALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMI 300

Query: 516 HGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSK 569
           HG  +     +  +L +K+    + + PD   ++I++  L +     E  A+++
Sbjct: 301 HGMCKACMVKEAYDLFYKL--KFKRVEPDFKAYTIMIAELNRAGMRTEADALNR 352



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 76/292 (26%), Positives = 123/292 (42%), Gaps = 50/292 (17%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CKSG   L +A      M   + +P + +F+ L  A AK      V S Y+ ++ + + P
Sbjct: 94  CKSG--RLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDP 151

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           +  T + LI        GLC+ NR+ EA  +   MI+ G  P+V+TY TL NGF ++   
Sbjct: 152 NVFTYSSLI-------YGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSR- 203

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
                                                   VD   +L  +M  RG+    
Sbjct: 204 ----------------------------------------VDDGIKLLDDMPQRGVAANT 223

Query: 229 VVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLEL 288
           V C TLI G+  AG  +   G+F  M   G  PN+ ++N+++  L   G++ +A    E 
Sbjct: 224 VSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEH 283

Query: 289 MIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILI 340
           M +   + D  TY  ++ G C    +  A ++F  +  K  +    +Y I+I
Sbjct: 284 MQKTRNDLDIITYTIMIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIMI 335



 Score = 66.2 bits (160), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 46/161 (28%), Positives = 83/161 (51%), Gaps = 4/161 (2%)

Query: 428 MLEMNKF--EFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCR 485
           ML+M K   E  I   + L++G C +  + +A  +  ++ + G+   VV  +I+I  LC+
Sbjct: 1   MLKMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCK 60

Query: 486 KGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDD 545
              +  A + L  M+  G +PNVVT+++L+ G  ++ + +     LH+M   + N  P+ 
Sbjct: 61  NRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKIN--PNV 118

Query: 546 TTFSIVVDLLAKDEKYHECSAVSKSSYRACLYVTIFQPSSL 586
            TFS ++D  AK  K  +  +V K   +  +   +F  SSL
Sbjct: 119 ITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSL 159



 Score = 41.6 bits (96), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 37/144 (25%), Positives = 61/144 (42%), Gaps = 9/144 (6%)

Query: 33  AVSSPETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYD 92
            V++     N  +    ++G I+L  A   FGYMT     P I S+N++   +  N   +
Sbjct: 218 GVAANTVSCNTLIKGYFQAGKIDL--ALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVE 275

Query: 93  AVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDV 152
             +S +  +       D +T  I+I+       G+C    +KEA  LF  +    V PD 
Sbjct: 276 KALSRFEHMQKTRNDLDIITYTIMIH-------GMCKACMVKEAYDLFYKLKFKRVEPDF 328

Query: 153 ITYGTLINGFCRTGNLSVALRLHK 176
             Y  +I    R G  + A  L++
Sbjct: 329 KAYTIMIAELNRAGMRTEADALNR 352


>gi|242065566|ref|XP_002454072.1| hypothetical protein SORBIDRAFT_04g024190 [Sorghum bicolor]
 gi|241933903|gb|EES07048.1| hypothetical protein SORBIDRAFT_04g024190 [Sorghum bicolor]
          Length = 820

 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 139/499 (27%), Positives = 227/499 (45%), Gaps = 33/499 (6%)

Query: 62  FFGYMTHMQPSPPI-SSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCF 120
            F +M H  P  P  +++N L  A+ +         +   +V  G  PD  T N LI   
Sbjct: 115 LFAHMYHHGPPAPTGATYNALIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLI--- 171

Query: 121 GNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVS 180
                G C   ++  A  LF  M   G   D ++Y  LI GFC TG +  AL L +++  
Sbjct: 172 ----LGYCRTQQLDVAQDLFDKMPLRGFSQDAVSYAALIEGFCETGRVDEALELFRELEQ 227

Query: 181 GDY----------------ENGLI---------SKTNIFSYSIIIDSLCKEGLVDKAKEL 215
            D                 E GL           +    +Y+ ++D  C+E   ++A+++
Sbjct: 228 PDMYTHAALVKGLCDARRGEEGLYMLQKMKELGWRPATRAYAALVDLWCREQKAEEAEKM 287

Query: 216 FLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCK 275
             EM   G+ P  V CT +++ +C  G       +F  M   G  PN+ T+N M+   C 
Sbjct: 288 LNEMFDNGLVPCAVTCTAVVNAYCREGRMSGAVRVFESMKLKGCEPNVWTYNAMVQGFCN 347

Query: 276 GGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVS 335
            GK+ +A  LL+ M + G+ PD  TYN L+ G C+ G I++A  +   M   G      +
Sbjct: 348 VGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIESAFRLLRLMEGNGLAADQYT 407

Query: 336 YNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMK 395
           YN+LI+  CK   V+EA SL+  +   G+R   +T+NT+++GL + G+   A    ++M 
Sbjct: 408 YNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKGGKFDVACTFLEKMV 467

Query: 396 LYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLD 455
                PD  TY+  I+ LCK    +E +     +     +     +  +ID L K     
Sbjct: 468 SAGCAPDTYTYSPFIENLCKTKGSREGLSFIDEMLQKDVKPSTVNYTIVIDRLFKERNYG 527

Query: 456 NAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLM 515
            A  ++ ++   G  P VVTY+  +   C +G+L +A + ++ M+K G   + + +NTL+
Sbjct: 528 LATRIWGQMVSLGCSPDVVTYTTSVRAYCNEGRLHEAENVVMEMKKGGIIVDAMAYNTLI 587

Query: 516 HGFLQNNKTSKVVELLHKM 534
            G     KT   V +L  M
Sbjct: 588 DGHTSIGKTDHAVTILKHM 606



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 120/469 (25%), Positives = 209/469 (44%), Gaps = 31/469 (6%)

Query: 105 GLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCR 164
           G  P+  T N ++       +G C   ++ +A  L   M   GV PDV+TY  LI G C 
Sbjct: 330 GCEPNVWTYNAMV-------QGFCNVGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCI 382

Query: 165 TGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGI 224
            G++  A RL + M      NGL +  + ++Y+++ID+LCK G VD+A  LF  ++ RGI
Sbjct: 383 DGHIESAFRLLRLMEG----NGLAA--DQYTYNVLIDALCKTGKVDEACSLFDGLEYRGI 436

Query: 225 NPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANG 284
            P  V   T+I+G C  G ++       +M+  G  P+  T++  I+ LCK     E   
Sbjct: 437 RPNSVTFNTVINGLCKGGKFDVACTFLEKMVSAGCAPDTYTYSPFIENLCKTKGSREGLS 496

Query: 285 LLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYC 344
            ++ M+Q+ + P    Y  ++D          A  I+  M S GC   VV+Y   +  YC
Sbjct: 497 FIDEMLQKDVKPSTVNYTIVIDRLFKERNYGLATRIWGQMVSLGCSPDVVTYTTSVRAYC 556

Query: 345 KILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLS 404
               + EA ++  ++   G+    + YNTL+ G    G+  +A  +   M      P+  
Sbjct: 557 NEGRLHEAENVVMEMKKGGIIVDAMAYNTLIDGHTSIGKTDHAVTILKHMTGVASMPNHF 616

Query: 405 TYNILI----------DGLCKNNCVQEAVKL------FHMLEMNKFEFGIEIFNCLIDGL 448
           T+ IL+          D   K   V + ++L      F +++ N        +  +++G 
Sbjct: 617 TFFILLRHLLQRRLAEDVPLKTTSVWKTIELADVFELFELMKKNSVPSSARAYLAILEGF 676

Query: 449 CKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNV 508
            +  RLD    L   + +  L      Y+ +++  C+      A   L  M  +G  PN+
Sbjct: 677 SEERRLDEVTSLVSHMKEDDLPLNEDIYTSLVNCFCKLRMYPDAWALLCSMIGHGFLPNL 736

Query: 509 VTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAK 557
           +++  L+ GF    +  +  E+   +   E N   D+  + I++D L +
Sbjct: 737 ISYQYLLSGFTAEGQADRAKEIFRGLRWKEYNT--DEIVWKIIIDGLIR 783



 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 110/460 (23%), Positives = 195/460 (42%), Gaps = 33/460 (7%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
           P + ++NLL      + H ++     R +   GL  D  T N+LI+        LC   +
Sbjct: 368 PDVVTYNLLIRGQCIDGHIESAFRLLRLMEGNGLAADQYTYNVLID-------ALCKTGK 420

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
           + EA  LF  +   G+RP+ +T+ T+ING C+ G   VA    +KMVS           +
Sbjct: 421 VDEACSLFDGLEYRGIRPNSVTFNTVINGLCKGGKFDVACTFLEKMVSAG------CAPD 474

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
            ++YS  I++LCK     +      EM  + + P+ V  T +I       N+     ++ 
Sbjct: 475 TYTYSPFIENLCKTKGSREGLSFIDEMLQKDVKPSTVNYTIVIDRLFKERNYGLATRIWG 534

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
           +M+ LG  P+++T+   +   C  G+++EA  ++  M + G+  D   YN+L+DG+  +G
Sbjct: 535 QMVSLGCSPDVVTYTTSVRAYCNEGRLHEAENVVMEMKKGGIIVDAMAYNTLIDGHTSIG 594

Query: 313 RIDTAREIFLSMHSKGCKHTVVSYNILI------------------NGYCKILNVEEAMS 354
           + D A  I    H  G       +   I                      K + + +   
Sbjct: 595 KTDHAVTIL--KHMTGVASMPNHFTFFILLRHLLQRRLAEDVPLKTTSVWKTIELADVFE 652

Query: 355 LYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLC 414
           L+  +  N V  +   Y  +L G  +  +      L   MK  ++  +   Y  L++  C
Sbjct: 653 LFELMKKNSVPSSARAYLAILEGFSEERRLDEVTSLVSHMKEDDLPLNEDIYTSLVNCFC 712

Query: 415 KNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVV 474
           K     +A  L   +  + F   +  +  L+ G    G+ D A E+F  L  K      +
Sbjct: 713 KLRMYPDAWALLCSMIGHGFLPNLISYQYLLSGFTAEGQADRAKEIFRGLRWKEYNTDEI 772

Query: 475 TYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTL 514
            + I+I GL R+G  +  +D +  +E+  C P+  T+  L
Sbjct: 773 VWKIIIDGLIRQGHPDMCHDMISILEQMKCKPSDETYAML 812


>gi|449522636|ref|XP_004168332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680-like [Cucumis sativus]
          Length = 590

 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 126/389 (32%), Positives = 215/389 (55%), Gaps = 18/389 (4%)

Query: 93  AVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDV 152
            + +FY +++  G  P     NILIN F       C E  I++A  +F  +   G+RP  
Sbjct: 206 TIWTFYSEILEYGFPPKVQYYNILINKF-------CKEGSIRDAKLIFNEIRKRGLRPTT 258

Query: 153 ITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKA 212
           +++ TLING C++ NL    RL K M     EN +    ++F+YS++I  LCKEG +D A
Sbjct: 259 VSFNTLINGLCKSRNLDEGFRLKKTM----EENRIYP--DVFTYSVLIHGLCKEGRLDVA 312

Query: 213 KELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDC 272
           ++LF EM+ RG+ P  +  T LI G   +   +     + +ML +G +P+L+ +N +++ 
Sbjct: 313 EQLFDEMQQRGLRPNGITFTALIDGQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNG 372

Query: 273 LCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHT 332
           LCK G +N+A  L++ M   G+ PD+ TY +L+DGYC  G +++A EI   M+ +G    
Sbjct: 373 LCKVGDVNKARKLVDEMKMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLD 432

Query: 333 VVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFD 392
            V++  LI+G+C+   V +A    R+++  G++    TY  ++ G  + G      KL  
Sbjct: 433 NVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLK 492

Query: 393 EMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFH-MLEMNKFEFGIEIFNCLIDGLCKA 451
           EM++   +P + TYN+L++GLCK   ++ A  L   ML +      I  +N L++G CK 
Sbjct: 493 EMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDI-TYNILLEGHCKN 551

Query: 452 GRLDNAWELFHKLPQKGLVPTVVTYSIMI 480
           G+ ++  +L +   +KGL+     Y+ ++
Sbjct: 552 GKAEDLLKLRN---EKGLIVDYAYYTSLV 577



 Score =  202 bits (515), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 118/382 (30%), Positives = 197/382 (51%), Gaps = 10/382 (2%)

Query: 138 WLF-KNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSY 196
           W F   ++ +G  P V  Y  LIN FC+ G++  A     K++  +     +  T + S+
Sbjct: 208 WTFYSEILEYGFPPKVQYYNILINKFCKEGSIRDA-----KLIFNEIRKRGLRPTTV-SF 261

Query: 197 SIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLD 256
           + +I+ LCK   +D+   L   M+   I P V   + LIHG C  G  +    LF EM  
Sbjct: 262 NTLINGLCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQ 321

Query: 257 LGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDT 316
            G RPN +TF  +ID   +  +++ A      M+  G+ PD   YN+L++G C VG ++ 
Sbjct: 322 RGLRPNGITFTALIDGQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNK 381

Query: 317 AREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLS 376
           AR++   M   G K   ++Y  LI+GYCK  ++E AM + + +   GV    + +  L+S
Sbjct: 382 ARKLVDEMKMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALIS 441

Query: 377 GLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEF 436
           G  + G+   A++   EM    ++PD +TY ++IDG CK   V+   KL   +++N  + 
Sbjct: 442 GFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKP 501

Query: 437 GIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFL 496
           G+  +N L++GLCK G++ NA  L   +   G+ P  +TY+I++ G C+ GK E   D L
Sbjct: 502 GVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNGKAE---DLL 558

Query: 497 LYMEKNGCAPNVVTFNTLMHGF 518
               + G   +   + +L+  +
Sbjct: 559 KLRNEKGLIVDYAYYTSLVSEY 580



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 107/373 (28%), Positives = 188/373 (50%), Gaps = 40/373 (10%)

Query: 215 LFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLC 274
            + E+   G  P V     LI+ FC  G+  +   +F E+   G RP  ++FN +I+ LC
Sbjct: 210 FYSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLC 269

Query: 275 KGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVV 334
           K   ++E   L + M +  + PD FTY+ L+ G C  GR+D A ++F  M  +G +   +
Sbjct: 270 KSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGI 329

Query: 335 SYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEM 394
           ++  LI+G  +   ++ AM+ Y Q+++ GV+  ++ YNTLL+GL + G    A+KL DEM
Sbjct: 330 TFTALIDGQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEM 389

Query: 395 KLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRL 454
           K+  ++PD  TY  LIDG CK   ++ A+++   +           F  LI G C+ GR+
Sbjct: 390 KMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRV 449

Query: 455 DNAWELFHKLPQKGLVPT-----------------------------------VVTYSIM 479
            +A     ++ + G+ P                                    V+TY+++
Sbjct: 450 RDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVL 509

Query: 480 IHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPER 539
           ++GLC++G+++ AN  L  M   G  P+ +T+N L+ G  +N K   +++L +     E+
Sbjct: 510 MNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNGKAEDLLKLRN-----EK 564

Query: 540 NLVPDDTTFSIVV 552
            L+ D   ++ +V
Sbjct: 565 GLIVDYAYYTSLV 577



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 111/353 (31%), Positives = 176/353 (49%), Gaps = 13/353 (3%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
           P +  +N+L     K          + ++   GL P  ++ N LIN       GLC    
Sbjct: 221 PKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLIN-------GLCKSRN 273

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
           + E   L K M    + PDV TY  LI+G C+ G L VA +L  +M     + GL  + N
Sbjct: 274 LDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEM----QQRGL--RPN 327

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
             +++ +ID   +   +D A   + +M   G+ P +V+  TL++G C  G+  +   L  
Sbjct: 328 GITFTALIDGQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVD 387

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
           EM  +G +P+ +T+  +ID  CK G +  A  + + M + G+  D   + +L+ G+C  G
Sbjct: 388 EMKMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDG 447

Query: 313 RIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYN 372
           R+  A      M   G K    +Y ++I+GYCK  NV+    L +++  NG +  VITYN
Sbjct: 448 RVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYN 507

Query: 373 TLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKL 425
            L++GL + GQ   A  L + M    V PD  TYNIL++G CKN   ++ +KL
Sbjct: 508 VLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNGKAEDLLKL 560



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 112/361 (31%), Positives = 183/361 (50%), Gaps = 16/361 (4%)

Query: 37  PETQL-NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVI 95
           P+ Q  N  +++ CK G I   +A+  F  +      P   SFN L   + K+R+ D   
Sbjct: 221 PKVQYYNILINKFCKEGSIR--DAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGF 278

Query: 96  SFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITY 155
              + +    + PD  T ++LI+       GLC E R+  A  LF  M   G+RP+ IT+
Sbjct: 279 RLKKTMEENRIYPDVFTYSVLIH-------GLCKEGRLDVAEQLFDEMQQRGLRPNGITF 331

Query: 156 GTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKEL 215
             LI+G  R+  +  A+  + +M++      +  K ++  Y+ +++ LCK G V+KA++L
Sbjct: 332 TALIDGQYRSRRMDSAMNTYHQMLT------MGVKPDLVMYNTLLNGLCKVGDVNKARKL 385

Query: 216 FLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCK 275
             EMK  G+ P  +  TTLI G+C  G+ E    +   M + G   + + F  +I   C+
Sbjct: 386 VDEMKMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCR 445

Query: 276 GGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVS 335
            G++ +A   L  M++ G+ PD  TY  ++DGYC  G +    ++   M   G K  V++
Sbjct: 446 DGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVIT 505

Query: 336 YNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMK 395
           YN+L+NG CK   ++ A  L   +++ GV    ITYN LL G  + G+A    KL +E  
Sbjct: 506 YNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNGKAEDLLKLRNEKG 565

Query: 396 L 396
           L
Sbjct: 566 L 566



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 83/265 (31%), Positives = 145/265 (54%), Gaps = 2/265 (0%)

Query: 289 MIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILN 348
           +++ G  P    YN L++ +C  G I  A+ IF  +  +G + T VS+N LING CK  N
Sbjct: 214 ILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRN 273

Query: 349 VEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNI 408
           ++E   L + +  N +   V TY+ L+ GL + G+   A++LFDEM+   + P+  T+  
Sbjct: 274 LDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTA 333

Query: 409 LIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKG 468
           LIDG  ++  +  A+  +H +     +  + ++N L++GLCK G ++ A +L  ++   G
Sbjct: 334 LIDGQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMKMVG 393

Query: 469 LVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVV 528
           + P  +TY+ +I G C++G LE A +    M + G   + V F  L+ GF ++ +     
Sbjct: 394 MKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAE 453

Query: 529 ELLHKMAEPERNLVPDDTTFSIVVD 553
             L +M E    + PDD T+++V+D
Sbjct: 454 RTLREMVEA--GMKPDDATYTMVID 476



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 95/304 (31%), Positives = 155/304 (50%), Gaps = 18/304 (5%)

Query: 44  FLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVS 103
            +H  CK G   L+ A   F  M      P   +F  L     ++R  D+ ++ Y ++++
Sbjct: 299 LIHGLCKEG--RLDVAEQLFDEMQQRGLRPNGITFTALIDGQYRSRRMDSAMNTYHQMLT 356

Query: 104 IGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFC 163
           +G+ PD +  N L+N       GLC    + +A  L   M   G++PD ITY TLI+G+C
Sbjct: 357 MGVKPDLVMYNTLLN-------GLCKVGDVNKARKLVDEMKMVGMKPDKITYTTLIDGYC 409

Query: 164 RTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRG 223
           + G+L  A+ + K M     E G++   +  +++ +I   C++G V  A+    EM   G
Sbjct: 410 KEGDLESAMEIRKGM----NEEGVV--LDNVAFTALISGFCRDGRVRDAERTLREMVEAG 463

Query: 224 INPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEAN 283
           + P     T +I G+C  GN +    L  EM   G +P ++T+NV+++ LCK G++  AN
Sbjct: 464 MKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNAN 523

Query: 284 GLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGY 343
            LLE M+  G+ PD  TYN L++G+C  G+   A ++    + KG       Y  L++ Y
Sbjct: 524 MLLEAMLNLGVTPDDITYNILLEGHCKNGK---AEDLLKLRNEKGLIVDYAYYTSLVSEY 580

Query: 344 CKIL 347
            K L
Sbjct: 581 NKSL 584



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 76/300 (25%), Positives = 148/300 (49%), Gaps = 8/300 (2%)

Query: 273 LCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHT 332
           + + GK + A+    ++   G     F +++LM  Y   G +  A + F  + +   +  
Sbjct: 128 VSRKGKDSAASVFAAILDTAGTRCSNFVFDALMIAYWDSGFVSDAIQCFRLVRNSNFQIP 187

Query: 333 VVSYNILINGYCKILNVEEAMSL---YRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQK 389
                 L++   K++N    +++   Y +I+  G    V  YN L++   + G    A+ 
Sbjct: 188 FHGCGYLLD---KMINSNSPVTIWTFYSEILEYGFPPKVQYYNILINKFCKEGSIRDAKL 244

Query: 390 LFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLC 449
           +F+E++   + P   ++N LI+GLCK+  + E  +L   +E N+    +  ++ LI GLC
Sbjct: 245 IFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLC 304

Query: 450 KAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVV 509
           K GRLD A +LF ++ Q+GL P  +T++ +I G  R  +++ A +    M   G  P++V
Sbjct: 305 KEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQYRSRRMDSAMNTYHQMLTMGVKPDLV 364

Query: 510 TFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSK 569
            +NTL++G  +    +K  +L+ +M      + PD  T++ ++D   K+        + K
Sbjct: 365 MYNTLLNGLCKVGDVNKARKLVDEMKMV--GMKPDKITYTTLIDGYCKEGDLESAMEIRK 422


>gi|46390363|dbj|BAD15828.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|215697127|dbj|BAG91121.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 554

 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 129/425 (30%), Positives = 216/425 (50%), Gaps = 18/425 (4%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVS-IGLLPDFLTLNILINCFGNKERGLCVEN 131
           P + ++N +          DA     R+LV+ + + PD  T N LI       RGLC   
Sbjct: 124 PDVMAYNAMVAGYCGAGQLDAA----RRLVAEMPVEPDAYTYNTLI-------RGLCGRG 172

Query: 132 RIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKT 191
           R   A  +   M+     PDV+TY  L+   C+      A++L  +M     + G     
Sbjct: 173 RTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEM----RDKGCTP-- 226

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
           +I +Y+++++ +C+EG VD A E    +   G  P  V    ++ G C A  WE+   L 
Sbjct: 227 DIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELM 286

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
            EM   G  PN++TFN++I  LC+ G +  A  +LE + + G  P+  +YN L+  +C  
Sbjct: 287 GEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQ 346

Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
            ++D A      M S+GC   +VSYN L+   C+   V+ A+ L  Q+   G    +I+Y
Sbjct: 347 KKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISY 406

Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
           NT++ GL +AG+   A +L +EM    ++PD+ TY+ +  GLC+ + +++A++ F  ++ 
Sbjct: 407 NTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQD 466

Query: 432 NKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEK 491
                   ++N +I GLCK     +A +LF  +   G +P   TY+I+I GL  +G +++
Sbjct: 467 MGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKE 526

Query: 492 ANDFL 496
           A D L
Sbjct: 527 ARDLL 531



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 122/436 (27%), Positives = 216/436 (49%), Gaps = 18/436 (4%)

Query: 99  RKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTL 158
           R L + G  PD +  N ++        G C   ++  A  L   M    V PD  TY TL
Sbjct: 117 RVLAACG--PDVMAYNAMVA-------GYCGAGQLDAARRLVAEM---PVEPDAYTYNTL 164

Query: 159 INGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLE 218
           I G C  G  + AL +  +M+            ++ +Y+I++++ CK     +A +L  E
Sbjct: 165 IRGLCGRGRTANALAVLDEMLRRR------CVPDVVTYTILLEATCKRSGYKQAMKLLDE 218

Query: 219 MKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGK 278
           M+ +G  P +V    +++G C  G  ++       +   G  PN +++N+++  LC   +
Sbjct: 219 MRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAER 278

Query: 279 INEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNI 338
             +A  L+  M Q+G  P+  T+N L+   C  G ++ A E+   +   GC    +SYN 
Sbjct: 279 WEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNP 338

Query: 339 LINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYN 398
           L++ +CK   +++AM+    ++S G    +++YNTLL+ L ++G+   A +L  ++K   
Sbjct: 339 LLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKG 398

Query: 399 VEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAW 458
             P L +YN +IDGL K    +EA++L + +     +  I  ++ +  GLC+  R+++A 
Sbjct: 399 CAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAI 458

Query: 459 ELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGF 518
             F K+   G+ P  V Y+ +I GLC++ +   A D   YM  NGC PN  T+  L+ G 
Sbjct: 459 RAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGL 518

Query: 519 LQNNKTSKVVELLHKM 534
                  +  +LL ++
Sbjct: 519 AYEGLIKEARDLLDEL 534



 Score =  195 bits (495), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 129/457 (28%), Positives = 218/457 (47%), Gaps = 21/457 (4%)

Query: 16  VSKVKLSSLFKSPRQIAAVSSPETQL-NEFLHENCKSGIINLNEARYFFGYMTHMQPSPP 74
           + K+  S      R++ A   P+    N  +   C +G   L+ AR     +  M   P 
Sbjct: 103 IKKLSASGRTAEARRVLAACGPDVMAYNAMVAGYCGAG--QLDAARRL---VAEMPVEPD 157

Query: 75  ISSFN-LLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRI 133
             ++N L+ G   + R  +A ++   +++    +PD +T  IL+          C  +  
Sbjct: 158 AYTYNTLIRGLCGRGRTANA-LAVLDEMLRRRCVPDVVTYTILLE-------ATCKRSGY 209

Query: 134 KEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNI 193
           K+A  L   M   G  PD++TY  ++NG C+ G +  A+   K + S   E       N 
Sbjct: 210 KQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCE------PNT 263

Query: 194 FSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIE 253
            SY+I++  LC     + A+EL  EM  +G  P VV    LI   C  G  E    +  +
Sbjct: 264 VSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQ 323

Query: 254 MLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGR 313
           +   G  PN L++N ++   CK  K+++A   L+LM+ RG  PD  +YN+L+   C  G 
Sbjct: 324 IPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGE 383

Query: 314 IDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNT 373
           +D A E+   +  KGC   ++SYN +I+G  K    +EA+ L  +++S G++  +ITY+T
Sbjct: 384 VDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYST 443

Query: 374 LLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNK 433
           + +GL +  +   A + F +++   + P+   YN +I GLCK      A+ LF  +  N 
Sbjct: 444 IAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNG 503

Query: 434 FEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLV 470
                  +  LI+GL   G +  A +L  +L  +G+V
Sbjct: 504 CMPNESTYTILIEGLAYEGLIKEARDLLDELCSRGVV 540



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 121/452 (26%), Positives = 214/452 (47%), Gaps = 22/452 (4%)

Query: 121 GNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVS 180
           G++ R L     + EA  L    +    RPD  T   LI     +G  + A R+      
Sbjct: 69  GDRLRSLVRRGELDEALRL----VGSARRPDAGTCAALIKKLSASGRTAEARRVLAA--- 121

Query: 181 GDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCC 240
                      ++ +Y+ ++   C  G +D A+ L  EM    + P      TLI G C 
Sbjct: 122 --------CGPDVMAYNAMVAGYCGAGQLDAARRLVAEMP---VEPDAYTYNTLIRGLCG 170

Query: 241 AGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFT 300
            G       +  EML     P+++T+ ++++  CK     +A  LL+ M  +G  PD  T
Sbjct: 171 RGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVT 230

Query: 301 YNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQII 360
           YN +++G C  GR+D A E   ++ S GC+   VSYNI++ G C     E+A  L  ++ 
Sbjct: 231 YNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMG 290

Query: 361 SNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQ 420
             G    V+T+N L+S L + G    A ++ +++  Y   P+  +YN L+   CK   + 
Sbjct: 291 QKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMD 350

Query: 421 EAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMI 480
           +A+    ++        I  +N L+  LC++G +D A EL H+L  KG  P +++Y+ +I
Sbjct: 351 KAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVI 410

Query: 481 HGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERN 540
            GL + GK ++A + L  M   G  P+++T++T+  G  + ++    +    K+   +  
Sbjct: 411 DGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQ--DMG 468

Query: 541 LVPDDTTFSIVVDLLAKDEKYHECSAVSKSSY 572
           + P+   ++ ++  L K  + H  SA+   +Y
Sbjct: 469 IRPNTVLYNAIILGLCKRRETH--SAIDLFAY 498


>gi|356529689|ref|XP_003533421.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Glycine max]
          Length = 892

 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 135/463 (29%), Positives = 241/463 (52%), Gaps = 20/463 (4%)

Query: 75  ISSFNLLFGAVAKNRHYDAVISFYRKLVSI---GLLPDFLTLNILINCFGNKERGLCVEN 131
           ++S+N L   +++    D +IS Y+++++     + P+ +TLN ++N +       C   
Sbjct: 151 LTSYNRLLMCLSRFSMVDEMISLYKEMLTDNGNSVFPNLITLNTMLNSY-------CKLG 203

Query: 132 RIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKT 191
            +  A   F  ++     PD+ TY +L+ G+CR  ++  A  +   M           + 
Sbjct: 204 NMAVARLFFVRILRCEPGPDLFTYTSLVLGYCRNDDVERACGVFCVM----------PRR 253

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
           N  SY+ +I  LC+ G + +A E +  M+  G  P V   T L+   C +G   E   LF
Sbjct: 254 NAVSYTNLIHGLCEAGKLHEALEFWARMREDGCFPTVRTYTVLVCALCESGRELEALSLF 313

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
            EM + G  PN+ T+ V+ID LCK G+++EA  +L  M+++G+ P    +N+L+  YC  
Sbjct: 314 GEMRERGCEPNVYTYTVLIDYLCKEGRMDEALKMLNEMVEKGVAPSVVPFNALIGSYCKR 373

Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
           G ++ A  +   M SK     V +YN LI G+C+  +++ AM+L  +++ + +   V+TY
Sbjct: 374 GMMEDAVGVLGLMESKKVCPNVRTYNELICGFCRGKSMDRAMALLNKMVESKLSPDVVTY 433

Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
           NTL+ GL + G    A +LF  M      PD  T+N  +  LC+   V EA ++   L+ 
Sbjct: 434 NTLIHGLCEVGVVDSASRLFRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQILESLKE 493

Query: 432 NKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEK 491
              +     +  LIDG CKAG++++A  LF ++  +  +P  +T+++MI GL ++GK++ 
Sbjct: 494 KHVKANEHAYTALIDGYCKAGKIEHAASLFKRMLAEECLPNSITFNVMIDGLRKEGKVQD 553

Query: 492 ANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKM 534
           A   +  M K    P + T+N L+   L+     +  E+L+++
Sbjct: 554 AMLLVEDMAKFDVKPTLHTYNILVEEVLKEYDFDRANEILNRL 596



 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 143/516 (27%), Positives = 252/516 (48%), Gaps = 49/516 (9%)

Query: 41  LNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSF---------------------- 78
           LN  L+  CK G  N+  AR FF  +   +P P + ++                      
Sbjct: 192 LNTMLNSYCKLG--NMAVARLFFVRILRCEPGPDLFTYTSLVLGYCRNDDVERACGVFCV 249

Query: 79  ----------NLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLC 128
                     NL+ G     + ++A + F+ ++   G  P   T  +L+ C       LC
Sbjct: 250 MPRRNAVSYTNLIHGLCEAGKLHEA-LEFWARMREDGCFPTVRTYTVLV-C------ALC 301

Query: 129 VENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLI 188
              R  EA  LF  M   G  P+V TY  LI+  C+ G +  AL++  +MV    E G+ 
Sbjct: 302 ESGRELEALSLFGEMRERGCEPNVYTYTVLIDYLCKEGRMDEALKMLNEMV----EKGV- 356

Query: 189 SKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVN 248
              ++  ++ +I S CK G+++ A  +   M+ + + P V     LI GFC   + +   
Sbjct: 357 -APSVVPFNALIGSYCKRGMMEDAVGVLGLMESKKVCPNVRTYNELICGFCRGKSMDRAM 415

Query: 249 GLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGY 308
            L  +M++    P+++T+N +I  LC+ G ++ A+ L  LMI+ G +PD++T+N+ M   
Sbjct: 416 ALLNKMVESKLSPDVVTYNTLIHGLCEVGVVDSASRLFRLMIRDGFSPDQWTFNAFMVCL 475

Query: 309 CLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTV 368
           C +GR+  A +I  S+  K  K    +Y  LI+GYCK   +E A SL++++++       
Sbjct: 476 CRMGRVGEAHQILESLKEKHVKANEHAYTALIDGYCKAGKIEHAASLFKRMLAEECLPNS 535

Query: 369 ITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHM 428
           IT+N ++ GL + G+   A  L ++M  ++V+P L TYNIL++ + K      A ++ + 
Sbjct: 536 ITFNVMIDGLRKEGKVQDAMLLVEDMAKFDVKPTLHTYNILVEEVLKEYDFDRANEILNR 595

Query: 429 LEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGK 488
           L  + ++  +  +   I   C  GRL+ A E+  K+  +G++     Y+++I+     G 
Sbjct: 596 LISSGYQPNVVTYTAFIKAYCSQGRLEEAEEMVIKIKNEGVLLDSFIYNLLINAYGCMGL 655

Query: 489 LEKANDFLLYMEKNGCAPNVVTFNTLM-HGFLQNNK 523
           L+ A   L  M   GC P+ +T++ LM H  ++ +K
Sbjct: 656 LDSAFGVLRRMFGTGCEPSYLTYSILMKHLVIEKHK 691



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 130/438 (29%), Positives = 217/438 (49%), Gaps = 15/438 (3%)

Query: 133 IKEATWLFKNMI---AFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLIS 189
           + E   L+K M+      V P++IT  T++N +C+ GN++VA     +++  +       
Sbjct: 167 VDEMISLYKEMLTDNGNSVFPNLITLNTMLNSYCKLGNMAVARLFFVRILRCE------P 220

Query: 190 KTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNG 249
             ++F+Y+ ++   C+   V++A  +F  M  R      V  T LIHG C AG   E   
Sbjct: 221 GPDLFTYTSLVLGYCRNDDVERACGVFCVMPRRN----AVSYTNLIHGLCEAGKLHEALE 276

Query: 250 LFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYC 309
            +  M + G  P + T+ V++  LC+ G+  EA  L   M +RG  P+ +TY  L+D  C
Sbjct: 277 FWARMREDGCFPTVRTYTVLVCALCESGRELEALSLFGEMRERGCEPNVYTYTVLIDYLC 336

Query: 310 LVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVI 369
             GR+D A ++   M  KG   +VV +N LI  YCK   +E+A+ +   + S  V   V 
Sbjct: 337 KEGRMDEALKMLNEMVEKGVAPSVVPFNALIGSYCKRGMMEDAVGVLGLMESKKVCPNVR 396

Query: 370 TYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHML 429
           TYN L+ G  +      A  L ++M    + PD+ TYN LI GLC+   V  A +LF ++
Sbjct: 397 TYNELICGFCRGKSMDRAMALLNKMVESKLSPDVVTYNTLIHGLCEVGVVDSASRLFRLM 456

Query: 430 EMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKL 489
             + F      FN  +  LC+ GR+  A ++   L +K +      Y+ +I G C+ GK+
Sbjct: 457 IRDGFSPDQWTFNAFMVCLCRMGRVGEAHQILESLKEKHVKANEHAYTALIDGYCKAGKI 516

Query: 490 EKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFS 549
           E A      M    C PN +TFN ++ G  +  K    + L+  MA  + ++ P   T++
Sbjct: 517 EHAASLFKRMLAEECLPNSITFNVMIDGLRKEGKVQDAMLLVEDMA--KFDVKPTLHTYN 574

Query: 550 IVVDLLAKDEKYHECSAV 567
           I+V+ + K+  +   + +
Sbjct: 575 ILVEEVLKEYDFDRANEI 592



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 106/405 (26%), Positives = 203/405 (50%), Gaps = 9/405 (2%)

Query: 168 LSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEM---KGRGI 224
           L++  R++    + D+++ L  K ++ SY+ ++  L +  +VD+   L+ EM    G  +
Sbjct: 126 LNLLRRMNTAAAAADHQHQLAFKLSLTSYNRLLMCLSRFSMVDEMISLYKEMLTDNGNSV 185

Query: 225 NPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANG 284
            P ++   T+++ +C  GN       F+ +L   P P+L T+  ++   C+   +  A G
Sbjct: 186 FPNLITLNTMLNSYCKLGNMAVARLFFVRILRCEPGPDLFTYTSLVLGYCRNDDVERACG 245

Query: 285 LLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYC 344
           +  +M +R    +  +Y +L+ G C  G++  A E +  M   GC  TV +Y +L+   C
Sbjct: 246 VFCVMPRR----NAVSYTNLIHGLCEAGKLHEALEFWARMREDGCFPTVRTYTVLVCALC 301

Query: 345 KILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLS 404
           +     EA+SL+ ++   G    V TY  L+  L + G+   A K+ +EM    V P + 
Sbjct: 302 ESGRELEALSLFGEMRERGCEPNVYTYTVLIDYLCKEGRMDEALKMLNEMVEKGVAPSVV 361

Query: 405 TYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKL 464
            +N LI   CK   +++AV +  ++E  K    +  +N LI G C+   +D A  L +K+
Sbjct: 362 PFNALIGSYCKRGMMEDAVGVLGLMESKKVCPNVRTYNELICGFCRGKSMDRAMALLNKM 421

Query: 465 PQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKT 524
            +  L P VVTY+ +IHGLC  G ++ A+     M ++G +P+  TFN  M    +  + 
Sbjct: 422 VESKLSPDVVTYNTLIHGLCEVGVVDSASRLFRLMIRDGFSPDQWTFNAFMVCLCRMGRV 481

Query: 525 SKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSK 569
            +  ++L  +   E+++  ++  ++ ++D   K  K    +++ K
Sbjct: 482 GEAHQILESLK--EKHVKANEHAYTALIDGYCKAGKIEHAASLFK 524



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 133/554 (24%), Positives = 234/554 (42%), Gaps = 46/554 (8%)

Query: 33  AVSSPETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYD 92
            V+      N  +   CK G+  + +A    G M   +  P + ++N L     + +  D
Sbjct: 355 GVAPSVVPFNALIGSYCKRGM--MEDAVGVLGLMESKKVCPNVRTYNELICGFCRGKSMD 412

Query: 93  AVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDV 152
             ++   K+V   L PD +T N LI+       GLC    +  A+ LF+ MI  G  PD 
Sbjct: 413 RAMALLNKMVESKLSPDVVTYNTLIH-------GLCEVGVVDSASRLFRLMIRDGFSPDQ 465

Query: 153 ITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKA 212
            T+   +   CR G +  A ++ + +           K N  +Y+ +ID  CK G ++ A
Sbjct: 466 WTFNAFMVCLCRMGRVGEAHQILESLKEKHV------KANEHAYTALIDGYCKAGKIEHA 519

Query: 213 KELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDC 272
             LF  M      P  +    +I G    G  ++   L  +M     +P L T+N++++ 
Sbjct: 520 ASLFKRMLAEECLPNSITFNVMIDGLRKEGKVQDAMLLVEDMAKFDVKPTLHTYNILVEE 579

Query: 273 LCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHT 332
           + K    + AN +L  +I  G  P+  TY + +  YC  GR++ A E+ + + ++G    
Sbjct: 580 VLKEYDFDRANEILNRLISSGYQPNVVTYTAFIKAYCSQGRLEEAEEMVIKIKNEGVLLD 639

Query: 333 VVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGL-------------- 378
              YN+LIN Y  +  ++ A  + R++   G   + +TY+ L+  L              
Sbjct: 640 SFIYNLLINAYGCMGLLDSAFGVLRRMFGTGCEPSYLTYSILMKHLVIEKHKKEGSNPVG 699

Query: 379 ---------------FQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAV 423
                          +     G    LF++M      P+L+TY+ LI+GLCK   +  A 
Sbjct: 700 LDVSLTNISVDNTDIWSKIDFGITTVLFEKMAECGCVPNLNTYSKLINGLCKVGRLNVAF 759

Query: 424 KLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGL 483
            L+H +          I N L+   CK G    A  L   + +   +  + +Y ++I GL
Sbjct: 760 SLYHHMREGGISPSEIIHNSLLSSCCKLGMFGEAVTLLDSMMECSHLAHLESYKLLICGL 819

Query: 484 CRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVP 543
             +   EKA      + + G   + V +  L+ G  +     +  ELL+ M +    L P
Sbjct: 820 FEQMNKEKAEAVFCSLLRCGYNYDEVAWKVLIDGLAKTGYVDQCSELLNLMEKNGCRLHP 879

Query: 544 DDTTFSIVVDLLAK 557
           +  T+S+++  L +
Sbjct: 880 E--TYSMLMQELNR 891



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 96/446 (21%), Positives = 194/446 (43%), Gaps = 44/446 (9%)

Query: 35  SSPETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAV 94
           S  +   N F+   C+ G   + EA      +          ++  L     K    +  
Sbjct: 462 SPDQWTFNAFMVCLCRMG--RVGEAHQILESLKEKHVKANEHAYTALIDGYCKAGKIEHA 519

Query: 95  ISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVIT 154
            S ++++++   LP+ +T N++I+       GL  E ++++A  L ++M  F V+P + T
Sbjct: 520 ASLFKRMLAEECLPNSITFNVMID-------GLRKEGKVQDAMLLVEDMAKFDVKPTLHT 572

Query: 155 YGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKE 214
           Y  L+    +  +   A  +  +++S  Y+       N+ +Y+  I + C +G +++A+E
Sbjct: 573 YNILVEEVLKEYDFDRANEILNRLISSGYQ------PNVVTYTAFIKAYCSQGRLEEAEE 626

Query: 215 LFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLC 274
           + +++K  G+     +   LI+ + C G  +   G+   M   G  P+ LT+++++  L 
Sbjct: 627 MVIKIKNEGVLLDSFIYNLLINAYGCMGLLDSAFGVLRRMFGTGCEPSYLTYSILMKHLV 686

Query: 275 KGGKINEANG-----------------------------LLELMIQRGLNPDRFTYNSLM 305
                 E +                              L E M + G  P+  TY+ L+
Sbjct: 687 IEKHKKEGSNPVGLDVSLTNISVDNTDIWSKIDFGITTVLFEKMAECGCVPNLNTYSKLI 746

Query: 306 DGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVR 365
           +G C VGR++ A  ++  M   G   + + +N L++  CK+    EA++L   ++     
Sbjct: 747 NGLCKVGRLNVAFSLYHHMREGGISPSEIIHNSLLSSCCKLGMFGEAVTLLDSMMECSHL 806

Query: 366 QTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKL 425
             + +Y  L+ GLF+      A+ +F  +       D   + +LIDGL K   V +  +L
Sbjct: 807 AHLESYKLLICGLFEQMNKEKAEAVFCSLLRCGYNYDEVAWKVLIDGLAKTGYVDQCSEL 866

Query: 426 FHMLEMNKFEFGIEIFNCLIDGLCKA 451
            +++E N      E ++ L+  L +A
Sbjct: 867 LNLMEKNGCRLHPETYSMLMQELNRA 892



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 80/294 (27%), Positives = 148/294 (50%), Gaps = 14/294 (4%)

Query: 262 NLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIF 321
           +L T + ++  L +   +  A  +   MI+   +P   T+  L++   L+ R++TA    
Sbjct: 85  SLATHHSLLLLLVRHRTLRAAENVRNSMIKSCTSPHDATF--LLN---LLRRMNTAAAAA 139

Query: 322 LSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIIS---NGVRQTVITYNTLLSGL 378
              H    K ++ SYN L+    +   V+E +SLY+++++   N V   +IT NT+L+  
Sbjct: 140 DHQHQLAFKLSLTSYNRLLMCLSRFSMVDEMISLYKEMLTDNGNSVFPNLITLNTMLNSY 199

Query: 379 FQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGI 438
            + G    A+  F  +      PDL TY  L+ G C+N+ V+ A  +F ++        +
Sbjct: 200 CKLGNMAVARLFFVRILRCEPGPDLFTYTSLVLGYCRNDDVERACGVFCVMPRRN---AV 256

Query: 439 EIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLY 498
              N LI GLC+AG+L  A E + ++ + G  PTV TY++++  LC  G+  +A      
Sbjct: 257 SYTN-LIHGLCEAGKLHEALEFWARMREDGCFPTVRTYTVLVCALCESGRELEALSLFGE 315

Query: 499 MEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVV 552
           M + GC PNV T+  L+    +  +  + +++L++M   E+ + P    F+ ++
Sbjct: 316 MRERGCEPNVYTYTVLIDYLCKEGRMDEALKMLNEMV--EKGVAPSVVPFNALI 367


>gi|15238562|ref|NP_200798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171023|sp|Q9FJE6.1|PP437_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At5g59900
 gi|9757911|dbj|BAB08358.1| unnamed protein product [Arabidopsis thaliana]
 gi|332009866|gb|AED97249.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 907

 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 139/460 (30%), Positives = 240/460 (52%), Gaps = 17/460 (3%)

Query: 78  FNLLFGAVAKNRHY-DAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEA 136
           F+LL     ++R   D V+ F   +  + LLP+  TL+ L++       GL        A
Sbjct: 159 FDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLH-------GLVKFRHFGLA 211

Query: 137 TWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSY 196
             LF +M++ G+RPDV  Y  +I   C   +LS A    K+M++     G     NI  Y
Sbjct: 212 MELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRA----KEMIAHMEATG--CDVNIVPY 265

Query: 197 SIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLD 256
           +++ID LCK+  V +A  +  ++ G+ + P VV   TL++G C    +E    +  EML 
Sbjct: 266 NVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLC 325

Query: 257 LGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDT 316
           L   P+    + +++ L K GKI EA  L++ ++  G++P+ F YN+L+D  C   +   
Sbjct: 326 LRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHE 385

Query: 317 AREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLS 376
           A  +F  M   G +   V+Y+ILI+ +C+   ++ A+S   +++  G++ +V  YN+L++
Sbjct: 386 AELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLIN 445

Query: 377 GLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEF 436
           G  + G    A+    EM    +EP + TY  L+ G C    + +A++L+H +       
Sbjct: 446 GHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAP 505

Query: 437 GIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFL 496
            I  F  L+ GL +AG + +A +LF+++ +  + P  VTY++MI G C +G + KA +FL
Sbjct: 506 SIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFL 565

Query: 497 LYMEKNGCAPNVVTFNTLMHGFLQNNKTSKV---VELLHK 533
             M + G  P+  ++  L+HG     + S+    V+ LHK
Sbjct: 566 KEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHK 605



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 158/592 (26%), Positives = 271/592 (45%), Gaps = 97/592 (16%)

Query: 27  SPRQIAAVSSPETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVA 86
           SP + AAVSS    L E L +  K     + EA      +     SP +  +N L  ++ 
Sbjct: 329 SPSE-AAVSS----LVEGLRKRGK-----IEEALNLVKRVVDFGVSPNLFVYNALIDSLC 378

Query: 87  KNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAF 146
           K R +      + ++  IGL P+ +T +ILI+ F       C   ++  A      M+  
Sbjct: 379 KGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMF-------CRRGKLDTALSFLGEMVDT 431

Query: 147 GVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKE 206
           G++  V  Y +LING C+ G++S A     +M++   E        + +Y+ ++   C +
Sbjct: 432 GLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLE------PTVVTYTSLMGGYCSK 485

Query: 207 GLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTF 266
           G ++KA  L+ EM G+GI P++   TTL+ G   AG   +   LF EM +   +PN +T+
Sbjct: 486 GKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTY 545

Query: 267 NVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTY------------------------- 301
           NVMI+  C+ G +++A   L+ M ++G+ PD ++Y                         
Sbjct: 546 NVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHK 605

Query: 302 ----------NSLMDGYCLVGRIDTA-------------------------------REI 320
                       L+ G+C  G+++ A                               R++
Sbjct: 606 GNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKL 665

Query: 321 FL----SMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLS 376
           F      MH +G K   V Y  +I+   K  + +EA  ++  +I+ G     +TY  +++
Sbjct: 666 FFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVIN 725

Query: 377 GLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNC-VQEAVKLFHMLEMNKFE 435
           GL +AG    A+ L  +M+  +  P+  TY   +D L K    +Q+AV+L H   +    
Sbjct: 726 GLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVEL-HNAILKGLL 784

Query: 436 FGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDF 495
                +N LI G C+ GR++ A EL  ++   G+ P  +TY+ MI+ LCR+  ++KA + 
Sbjct: 785 ANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIEL 844

Query: 496 LLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTT 547
              M + G  P+ V +NTL+HG     +  K  EL ++M    + L+P++ T
Sbjct: 845 WNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEML--RQGLIPNNKT 894



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 153/626 (24%), Positives = 268/626 (42%), Gaps = 131/626 (20%)

Query: 55  NLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLN 114
           +L+ A+    +M        I  +N+L   + K +     +   + L    L PD +T  
Sbjct: 242 DLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYC 301

Query: 115 ILIN--C-------------------FGNKE-------RGLCVENRIKEATWLFKNMIAF 146
            L+   C                   F   E        GL    +I+EA  L K ++ F
Sbjct: 302 TLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDF 361

Query: 147 GV-----------------------------------RPDVITYGTLINGFCRTGNLSVA 171
           GV                                   RP+ +TY  LI+ FCR G L  A
Sbjct: 362 GVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTA 421

Query: 172 LRLHKKMV---------------SGDYENGLISKTNIF--------------SYSIIIDS 202
           L    +MV               +G  + G IS    F              +Y+ ++  
Sbjct: 422 LSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGG 481

Query: 203 LCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPN 262
            C +G ++KA  L+ EM G+GI P++   TTL+ G   AG   +   LF EM +   +PN
Sbjct: 482 YCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPN 541

Query: 263 LLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFL 322
            +T+NVMI+  C+ G +++A   L+ M ++G+ PD ++Y  L+ G CL G+   A+    
Sbjct: 542 RVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVD 601

Query: 323 SMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAG 382
            +H   C+   + Y  L++G+C+   +EEA+S+ ++++  GV   ++ Y  L+ G  +  
Sbjct: 602 GLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHK 661

Query: 383 QAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEI-F 441
                  L  EM    ++PD   Y  +ID   K    +EA  ++ ++ +N+     E+ +
Sbjct: 662 DRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLM-INEGCVPNEVTY 720

Query: 442 NCLIDGLCKAGRLDNAWEL-----------------------------------FHKLPQ 466
             +I+GLCKAG ++ A  L                                    H    
Sbjct: 721 TAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAIL 780

Query: 467 KGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSK 526
           KGL+    TY+++I G CR+G++E+A++ +  M  +G +P+ +T+ T+++   + N   K
Sbjct: 781 KGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKK 840

Query: 527 VVELLHKMAEPERNLVPDDTTFSIVV 552
            +EL + M   E+ + PD   ++ ++
Sbjct: 841 AIELWNSMT--EKGIRPDRVAYNTLI 864



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 146/593 (24%), Positives = 248/593 (41%), Gaps = 108/593 (18%)

Query: 66  MTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPD---------------- 109
           +T +   P + + + L   + K RH+   +  +  +VS+G+ PD                
Sbjct: 183 ITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKD 242

Query: 110 -------------------FLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRP 150
                               +  N+LI+       GLC + ++ EA  + K++    ++P
Sbjct: 243 LSRAKEMIAHMEATGCDVNIVPYNVLID-------GLCKKQKVWEAVGIKKDLAGKDLKP 295

Query: 151 DVITYGTLINGFCRTGNLSVALRLHKKM---------------VSGDYENGLISKT---- 191
           DV+TY TL+ G C+     + L +  +M               V G  + G I +     
Sbjct: 296 DVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLV 355

Query: 192 ----------NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCA 241
                     N+F Y+ +IDSLCK     +A+ LF  M   G+ P  V  + LI  FC  
Sbjct: 356 KRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRR 415

Query: 242 GNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTY 301
           G  +       EM+D G + ++  +N +I+  CK G I+ A G +  MI + L P   TY
Sbjct: 416 GKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTY 475

Query: 302 NSLMDGYCLVGRIDTAREIFLSMHSKGCKHTV---------------------------- 333
            SLM GYC  G+I+ A  ++  M  KG   ++                            
Sbjct: 476 TSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAE 535

Query: 334 -------VSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGY 386
                  V+YN++I GYC+  ++ +A    +++   G+     +Y  L+ GL   GQA  
Sbjct: 536 WNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASE 595

Query: 387 AQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLID 446
           A+   D +   N E +   Y  L+ G C+   ++EA+ +   +     +  +  +  LID
Sbjct: 596 AKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLID 655

Query: 447 GLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAP 506
           G  K       + L  ++  +GL P  V Y+ MI    + G  ++A      M   GC P
Sbjct: 656 GSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVP 715

Query: 507 NVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDE 559
           N VT+  +++G  +    ++   L  KM +P  + VP+  T+   +D+L K E
Sbjct: 716 NEVTYTAVINGLCKAGFVNEAEVLCSKM-QPVSS-VPNQVTYGCFLDILTKGE 766



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 134/474 (28%), Positives = 219/474 (46%), Gaps = 19/474 (4%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
           N  ++ +CK G I+  E   F   M + +  P + ++  L G        +  +  Y ++
Sbjct: 441 NSLINGHCKFGDISAAEG--FMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEM 498

Query: 102 VSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLING 161
              G+ P   T   L++       GL     I++A  LF  M  + V+P+ +TY  +I G
Sbjct: 499 TGKGIAPSIYTFTTLLS-------GLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEG 551

Query: 162 FCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKG 221
           +C  G++S A    K+M     E G++  T  +SY  +I  LC  G   +AK +F++   
Sbjct: 552 YCEEGDMSKAFEFLKEMT----EKGIVPDT--YSYRPLIHGLCLTGQASEAK-VFVDGLH 604

Query: 222 RGINPAVVVC-TTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKIN 280
           +G      +C T L+HGFC  G  EE   +  EM+  G   +L+ + V+ID   K     
Sbjct: 605 KGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRK 664

Query: 281 EANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILI 340
              GLL+ M  RGL PD   Y S++D     G    A  I+  M ++GC    V+Y  +I
Sbjct: 665 LFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVI 724

Query: 341 NGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKL-FDEMKLYNV 399
           NG CK   V EA  L  ++         +TY   L  +   G+    + +      L  +
Sbjct: 725 NGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLD-ILTKGEVDMQKAVELHNAILKGL 783

Query: 400 EPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWE 459
             + +TYN+LI G C+   ++EA +L   +  +        +  +I+ LC+   +  A E
Sbjct: 784 LANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIE 843

Query: 460 LFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNT 513
           L++ + +KG+ P  V Y+ +IHG C  G++ KA +    M + G  PN  T  T
Sbjct: 844 LWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKTSRT 897



 Score = 96.3 bits (238), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 59/228 (25%), Positives = 112/228 (49%), Gaps = 2/228 (0%)

Query: 333 VVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFD 392
           V + + L++G  K  +   AM L+  ++S G+R  V  Y  ++  L +      A+++  
Sbjct: 192 VRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIA 251

Query: 393 EMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAG 452
            M+    + ++  YN+LIDGLCK   V EAV +   L     +  +  +  L+ GLCK  
Sbjct: 252 HMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQ 311

Query: 453 RLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFN 512
             +   E+  ++      P+    S ++ GL ++GK+E+A + +  +   G +PN+  +N
Sbjct: 312 EFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYN 371

Query: 513 TLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEK 560
            L+    +  K  +   L  +M +    L P+D T+SI++D+  +  K
Sbjct: 372 ALIDSLCKGRKFHEAELLFDRMGKI--GLRPNDVTYSILIDMFCRRGK 417


>gi|356538593|ref|XP_003537787.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Glycine max]
          Length = 583

 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 128/416 (30%), Positives = 222/416 (53%), Gaps = 16/416 (3%)

Query: 75  ISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIK 134
           ++S N L  A+ K      +   Y++++   + P+  T NI IN       GLC   ++ 
Sbjct: 165 LNSCNPLLSALVKGNETGEMQYVYKEMIKRRIQPNLTTFNIFIN-------GLCKAGKLN 217

Query: 135 EATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALR---LHKKMVSGDYENGLISKT 191
           +A  + +++ A+G  P+++TY TLI+G C+ G+     R   + K+M++           
Sbjct: 218 KAEDVIEDIKAWGFSPNIVTYNTLIDGHCKKGSAGKMYRADAILKEMLANKI------CP 271

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
           N  +++ +ID  CK+  V  AK  F EM+ +G+ P +V   +LI+G    G  +E   L+
Sbjct: 272 NEITFNTLIDGFCKDENVLAAKNAFEEMQRQGLKPNIVTYNSLINGLSNNGKLDEAIALW 331

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
            +M+ LG +PN++TFN +I+  CK   I EA  L + + ++ L P+  T+N+++D +C  
Sbjct: 332 DKMVGLGLKPNIVTFNALINGFCKKKMIKEARKLFDDIAEQDLVPNAITFNTMIDAFCKA 391

Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
           G ++    +  SM  +G    V +YN LI G C+  NV  A  L  ++ +  ++  V+TY
Sbjct: 392 GMMEEGFALHNSMLDEGIFPNVSTYNCLIAGLCRNQNVRAAKKLLNEMENYELKADVVTY 451

Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
           N L+ G  + G+   A+KL  EM    V+P+  TYN L+DG C    ++ A+K+   +E 
Sbjct: 452 NILIGGWCKDGEPSKAEKLLGEMLNVGVKPNHVTYNTLMDGYCMEGNLKAALKVRTQMEK 511

Query: 432 NKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKG 487
                 +  +N LI G CK G+L++A  L +++ +KGL P   TY ++   +  KG
Sbjct: 512 EGKRANVVTYNVLIKGFCKTGKLEDANRLLNEMLEKGLNPNRTTYDVVRLEMLEKG 567



 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 136/430 (31%), Positives = 224/430 (52%), Gaps = 12/430 (2%)

Query: 132 RIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKT 191
            I  A  +F+ +  +G +  + +   L++   +         ++K+M+    +       
Sbjct: 145 EIHSACEVFRRVQDYGFKLSLNSCNPLLSALVKGNETGEMQYVYKEMIKRRIQ------P 198

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFC---CAGNWEEVN 248
           N+ +++I I+ LCK G ++KA+++  ++K  G +P +V   TLI G C    AG     +
Sbjct: 199 NLTTFNIFINGLCKAGKLNKAEDVIEDIKAWGFSPNIVTYNTLIDGHCKKGSAGKMYRAD 258

Query: 249 GLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGY 308
            +  EML     PN +TFN +ID  CK   +  A    E M ++GL P+  TYNSL++G 
Sbjct: 259 AILKEMLANKICPNEITFNTLIDGFCKDENVLAAKNAFEEMQRQGLKPNIVTYNSLINGL 318

Query: 309 CLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTV 368
              G++D A  ++  M   G K  +V++N LING+CK   ++EA  L+  I    +    
Sbjct: 319 SNNGKLDEAIALWDKMVGLGLKPNIVTFNALINGFCKKKMIKEARKLFDDIAEQDLVPNA 378

Query: 369 ITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHM 428
           IT+NT++    +AG       L + M    + P++STYN LI GLC+N  V+ A KL + 
Sbjct: 379 ITFNTMIDAFCKAGMMEEGFALHNSMLDEGIFPNVSTYNCLIAGLCRNQNVRAAKKLLNE 438

Query: 429 LEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGK 488
           +E  + +  +  +N LI G CK G    A +L  ++   G+ P  VTY+ ++ G C +G 
Sbjct: 439 MENYELKADVVTYNILIGGWCKDGEPSKAEKLLGEMLNVGVKPNHVTYNTLMDGYCMEGN 498

Query: 489 LEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTF 548
           L+ A      MEK G   NVVT+N L+ GF +  K      LL++M   E+ L P+ TT+
Sbjct: 499 LKAALKVRTQMEKEGKRANVVTYNVLIKGFCKTGKLEDANRLLNEML--EKGLNPNRTTY 556

Query: 549 SIV-VDLLAK 557
            +V +++L K
Sbjct: 557 DVVRLEMLEK 566



 Score =  128 bits (322), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 87/285 (30%), Positives = 145/285 (50%), Gaps = 10/285 (3%)

Query: 294 LNPDRFTYNSLMD-----GYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILN 348
           L  DR   N+L+       Y     I +A E+F  +   G K ++ S N L++   K   
Sbjct: 121 LGGDRPCANALITDMLVLAYVTNLEIHSACEVFRRVQDYGFKLSLNSCNPLLSALVKGNE 180

Query: 349 VEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNI 408
             E   +Y+++I   ++  + T+N  ++GL +AG+   A+ + +++K +   P++ TYN 
Sbjct: 181 TGEMQYVYKEMIKRRIQPNLTTFNIFINGLCKAGKLNKAEDVIEDIKAWGFSPNIVTYNT 240

Query: 409 LIDGLCKNNCVQEAVKLFHMLE---MNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLP 465
           LIDG CK     +  +   +L+    NK       FN LIDG CK   +  A   F ++ 
Sbjct: 241 LIDGHCKKGSAGKMYRADAILKEMLANKICPNEITFNTLIDGFCKDENVLAAKNAFEEMQ 300

Query: 466 QKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTS 525
           ++GL P +VTY+ +I+GL   GKL++A      M   G  PN+VTFN L++GF +     
Sbjct: 301 RQGLKPNIVTYNSLINGLSNNGKLDEAIALWDKMVGLGLKPNIVTFNALINGFCKKKMIK 360

Query: 526 KVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKS 570
           +  +L   +AE  ++LVP+  TF+ ++D   K     E  A+  S
Sbjct: 361 EARKLFDDIAE--QDLVPNAITFNTMIDAFCKAGMMEEGFALHNS 403



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 84/304 (27%), Positives = 125/304 (41%), Gaps = 74/304 (24%)

Query: 38  ETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISF 97
           E   N  +   CK    N+  A+  F  M      P I ++N L   ++ N   D  I+ 
Sbjct: 273 EITFNTLIDGFCKDE--NVLAAKNAFEEMQRQGLKPNIVTYNSLINGLSNNGKLDEAIAL 330

Query: 98  YRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGT 157
           + K+V +GL P+ +T N LIN       G C +  IKEA  LF ++    + P+ IT+ T
Sbjct: 331 WDKMVGLGLKPNIVTFNALIN-------GFCKKKMIKEARKLFDDIAEQDLVPNAITFNT 383

Query: 158 LINGFCRTGNLSVALRLHKKMVS-GDYEN---------GLIS------------------ 189
           +I+ FC+ G +     LH  M+  G + N         GL                    
Sbjct: 384 MIDAFCKAGMMEEGFALHNSMLDEGIFPNVSTYNCLIAGLCRNQNVRAAKKLLNEMENYE 443

Query: 190 -KTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPA--------------------- 227
            K ++ +Y+I+I   CK+G   KA++L  EM   G+ P                      
Sbjct: 444 LKADVVTYNILIGGWCKDGEPSKAEKLLGEMLNVGVKPNHVTYNTLMDGYCMEGNLKAAL 503

Query: 228 --------------VVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVM-IDC 272
                         VV    LI GFC  G  E+ N L  EML+ G  PN  T++V+ ++ 
Sbjct: 504 KVRTQMEKEGKRANVVTYNVLIKGFCKTGKLEDANRLLNEMLEKGLNPNRTTYDVVRLEM 563

Query: 273 LCKG 276
           L KG
Sbjct: 564 LEKG 567


>gi|449508997|ref|XP_004163464.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Cucumis sativus]
          Length = 732

 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 147/483 (30%), Positives = 236/483 (48%), Gaps = 33/483 (6%)

Query: 66  MTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKER 125
           MT     P    +  L  A+++       +    ++  +G +PD  T N +I+       
Sbjct: 244 MTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDVIH------- 296

Query: 126 GLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKK-------- 177
           GLC  N+I +AT L   M+  G  PD +TYG L++G CR G L+ A ++  K        
Sbjct: 297 GLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKILIKIPCPNNAI 356

Query: 178 ---MVSGDYENGLISKT---------------NIFSYSIIIDSLCKEGLVDKAKELFLEM 219
              +++G   +G + +                +IF+Y+I++  LCKEG +  A++L  EM
Sbjct: 357 LNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEM 416

Query: 220 KGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKI 279
             RG  P V+    L++G C AG  EE   +  EM   G   N + +N +I  LC+  K+
Sbjct: 417 SRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKV 476

Query: 280 NEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNIL 339
           + A  LL  M  +G  PD FTYNSL+ G C V RID A  +F +M   G     V+YN L
Sbjct: 477 HVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTL 536

Query: 340 INGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNV 399
           I+   +    ++A++L   ++  G     ITYN L+    + G      +L+++M +  +
Sbjct: 537 IHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGL 596

Query: 400 EPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWE 459
             D  + NI+I+GLCK   V  A +         F   I  +N +++GLCK GR+  A  
Sbjct: 597 GADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALN 656

Query: 460 LFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFL 519
           LF +L  +G+ P   TY+  I   C++G +  A  F     +NG  P+ +T+N L++  L
Sbjct: 657 LFDRLQVEGVRPDAFTYNTFISWQCKEGMVNDACSFFYRGIENGFVPSNLTWNVLVYTLL 716

Query: 520 QNN 522
           + +
Sbjct: 717 KQS 719



 Score =  208 bits (529), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 145/524 (27%), Positives = 243/524 (46%), Gaps = 57/524 (10%)

Query: 72  SPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVEN 131
            P   S++L+   +          + +  ++S G+ P   T  I++       + LC+ N
Sbjct: 180 EPTFKSYDLVLEILVTGNCPQVATNVFYDMLSKGVSPTVFTFGIVM-------KALCMFN 232

Query: 132 RIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKM-VSGDYENGLISK 190
            +  A  L ++M   G  P+ I Y TLI+   +   +S AL+L ++M V G         
Sbjct: 233 EVDSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMG-------CM 285

Query: 191 TNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGL 250
            ++ +++ +I  LCK   +  A +L   M  RG  P  +    L+HG C  G   E   +
Sbjct: 286 PDVQTFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKI 345

Query: 251 FIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLL-ELMIQRGLNPDRFTYNSLMDGYC 309
            I++    P PN    N +I+     G++ EA   L E MI  G  PD FTYN LM G C
Sbjct: 346 LIKI----PCPNNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLC 401

Query: 310 LVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVI 369
             G +  AR++   M  +GC+  V++Y IL+NG CK   +EEA  +  ++ + G+    +
Sbjct: 402 KEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSV 461

Query: 370 TYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFH-- 427
            YN L+  L +  +   A  L  EM     +PDL TYN LI GLCK + + EA +LFH  
Sbjct: 462 IYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNM 521

Query: 428 ------------------MLEMNKFEFGIEI---------------FNCLIDGLCKAGRL 454
                             +L    F+  + +               +N LI   CK G +
Sbjct: 522 LLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNI 581

Query: 455 DNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTL 514
           +   EL+ ++   GL    ++ +IMI+GLC+ GK++ A +FL      G  P++VT+N++
Sbjct: 582 EKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSV 641

Query: 515 MHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKD 558
           ++G  +  +  + + L  ++      + PD  T++  +    K+
Sbjct: 642 LNGLCKVGRIKEALNLFDRLQ--VEGVRPDAFTYNTFISWQCKE 683



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 136/423 (32%), Positives = 198/423 (46%), Gaps = 22/423 (5%)

Query: 44  FLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRK-LV 102
            LH  C+ G   LNEAR     +    P P  +  N L      +       SF  + ++
Sbjct: 329 LLHGLCRIG--KLNEARKILIKI----PCPNNAILNTLINGYVMSGQLKEAQSFLNETMI 382

Query: 103 SIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGF 162
           + G  PD  T NIL++       GLC E  +  A  L   M   G  P+VITY  L+NG 
Sbjct: 383 NFGFQPDIFTYNILMH-------GLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGL 435

Query: 163 CRTGNLSVA-LRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKG 221
           C+ G L  A L LH+    G   N +I       Y+ +I +LC++  V  A  L  EM  
Sbjct: 436 CKAGLLEEAGLVLHEMSARGLTINSVI-------YNCLICALCRKEKVHVALNLLSEMCT 488

Query: 222 RGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINE 281
           +G  P +    +LI+G C     +E   LF  ML  G   N +T+N +I  L + G   +
Sbjct: 489 KGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQK 548

Query: 282 ANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILIN 341
           A  L+  M+ RG   D+ TYN L+  +C VG I+   E++  M   G     +S NI+IN
Sbjct: 549 ALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMIN 608

Query: 342 GYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEP 401
           G CK+  V+ A    R  I+ G    ++TYN++L+GL + G+   A  LFD +++  V P
Sbjct: 609 GLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRP 668

Query: 402 DLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELF 461
           D  TYN  I   CK   V +A   F+    N F      +N L+  L K    +N + + 
Sbjct: 669 DAFTYNTFISWQCKEGMVNDACSFFYRGIENGFVPSNLTWNVLVYTLLKQSNQENNFFVL 728

Query: 462 HKL 464
            +L
Sbjct: 729 DEL 731



 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 69/256 (26%), Positives = 119/256 (46%), Gaps = 4/256 (1%)

Query: 314 IDTAREIFLSMH-SKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYN 372
           + T  EIF  +   KG  HT   Y + IN    I   +    L  Q+   G+      + 
Sbjct: 92  VPTLLEIFERVGGQKGYCHTFDVYYVFINKLGAIGKFKLIDKLLMQMKEEGIVFRESIFM 151

Query: 373 TLLSGLFQAGQAGYAQKLFDEMK-LYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
            ++    +AGQ G A +L  +M+ +Y  EP   +Y+++++ L   NC Q A  +F+ +  
Sbjct: 152 IIMKHYGKAGQPGQAIRLLLDMRAVYLCEPTFKSYDLVLEILVTGNCPQVATNVFYDMLS 211

Query: 432 NKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEK 491
                 +  F  ++  LC    +D+A  L   + + G VP  + Y  +IH L +K ++ +
Sbjct: 212 KGVSPTVFTFGIVMKALCMFNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQVSE 271

Query: 492 ANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIV 551
           A   L  M   GC P+V TFN ++HG  + NK     +L+ +M    R   PD+ T+  +
Sbjct: 272 ALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKIHDATKLVDRML--LRGFYPDNMTYGFL 329

Query: 552 VDLLAKDEKYHECSAV 567
           +  L +  K +E   +
Sbjct: 330 LHGLCRIGKLNEARKI 345


>gi|115482590|ref|NP_001064888.1| Os10g0484300 [Oryza sativa Japonica Group]
 gi|22094354|gb|AAM91881.1| putative membrane-associated salt-inducible protein [Oryza sativa
           Japonica Group]
 gi|31432736|gb|AAP54334.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|78708824|gb|ABB47799.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113639497|dbj|BAF26802.1| Os10g0484300 [Oryza sativa Japonica Group]
          Length = 578

 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 135/430 (31%), Positives = 217/430 (50%), Gaps = 16/430 (3%)

Query: 61  YFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCF 120
           +     +H +  P  SS N L   +   +  D     +R  +   + PD  T N +I+  
Sbjct: 142 FLLAGESHPRHRPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVIS-- 199

Query: 121 GNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCR---TGNLSVALRLHKK 177
                GLC   ++++A  + K++ A+G+ P V TY +LI+G+C+    GN+     L K+
Sbjct: 200 -----GLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKE 254

Query: 178 MVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHG 237
           MV    E G IS T + ++ ++I+  CK      A  +F EMK +GI  +VV   +LI G
Sbjct: 255 MV----EAG-ISPTAV-TFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISG 308

Query: 238 FCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPD 297
            C  G  EE   L  EM DLG  PN +TF  ++   CK G + +AN  ++ M +R + PD
Sbjct: 309 LCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPD 368

Query: 298 RFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYR 357
              YN L+D Y  +G+++ A  +  +M  KG    V +YN LI G+ +  +   A  L  
Sbjct: 369 VVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLD 428

Query: 358 QIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNN 417
           ++   G+   V+TYN L+  L   G+   A KL DEM    +EP+  TYN +I G C   
Sbjct: 429 EMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKG 488

Query: 418 CVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYS 477
            ++ A ++   +E  +    +  +N  I   C+ G++D A +L +++  K LVP  +TY 
Sbjct: 489 NIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYE 548

Query: 478 IMIHGLCRKG 487
            +  G+  KG
Sbjct: 549 TIKEGMMEKG 558



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 128/405 (31%), Positives = 206/405 (50%), Gaps = 9/405 (2%)

Query: 126 GLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYEN 185
           GL    R+  A   F++ +   V PD+ T+ T+I+G CR G L  A  + K + +     
Sbjct: 165 GLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDVAKDIKAW---- 220

Query: 186 GLISKTNIFSYSIIIDSLCKEGLVDK---AKELFLEMKGRGINPAVVVCTTLIHGFCCAG 242
           GL    ++ +Y+ +ID  CK+G          L  EM   GI+P  V    LI+G+C   
Sbjct: 221 GL--APSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNS 278

Query: 243 NWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYN 302
           N      +F EM   G   +++T+N +I  LC  GK+ E   L+E M   GL+P+  T+ 
Sbjct: 279 NTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFG 338

Query: 303 SLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISN 362
            ++ G+C  G +  A +    M  +  +  VV YNILI+ Y ++  +E+AM++   +   
Sbjct: 339 CVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKK 398

Query: 363 GVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEA 422
           G+   V TYN L++G  ++G    A  L DEMK   +E D+ TYN+LI  LC    V++A
Sbjct: 399 GISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKA 458

Query: 423 VKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHG 482
           VKL   +     E     +N +I G C  G + +A+E+  ++ +      VVTY++ I  
Sbjct: 459 VKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKY 518

Query: 483 LCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKV 527
            C+ GK+++AND L  M      PN +T+ T+  G ++   T  +
Sbjct: 519 FCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEGMMEKGYTPDI 563



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 102/348 (29%), Positives = 172/348 (49%), Gaps = 3/348 (0%)

Query: 190 KTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNG 249
           + +  S + ++  L     VD A++ F     R ++P +    T+I G C  G   +   
Sbjct: 153 RPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGD 212

Query: 250 LFIEMLDLGPRPNLLTFNVMIDCLCK---GGKINEANGLLELMIQRGLNPDRFTYNSLMD 306
           +  ++   G  P++ T+N +ID  CK    G +   + LL+ M++ G++P   T+  L++
Sbjct: 213 VAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLIN 272

Query: 307 GYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQ 366
           GYC       A  +F  M  +G   +VV+YN LI+G C    VEE + L  ++   G+  
Sbjct: 273 GYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSP 332

Query: 367 TVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLF 426
             IT+  +L G  + G    A    D M   NVEPD+  YNILID   +   +++A+ + 
Sbjct: 333 NEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVK 392

Query: 427 HMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRK 486
             +        +  +NCLI G  ++G   +A  L  ++ +KG+   VVTY+++I  LC K
Sbjct: 393 EAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCK 452

Query: 487 GKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKM 534
           G++ KA   L  M + G  PN +T+NT++ GF          E+  +M
Sbjct: 453 GEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRM 500



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 97/330 (29%), Positives = 165/330 (50%), Gaps = 5/330 (1%)

Query: 226 PAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGL 285
           P+      L+ G   A   +     F   L     P++ TFN +I  LC+ G++ +A  +
Sbjct: 154 PSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDV 213

Query: 286 LELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFL---SMHSKGCKHTVVSYNILING 342
            + +   GL P   TYNSL+DGYC  G       + +    M   G   T V++ +LING
Sbjct: 214 AKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLING 273

Query: 343 YCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPD 402
           YCK  N   A+ ++ ++   G+  +V+TYN+L+SGL   G+     KL +EM+   + P+
Sbjct: 274 YCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPN 333

Query: 403 LSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFH 462
             T+  ++ G CK   + +A      +     E  + I+N LID   + G++++A  +  
Sbjct: 334 EITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKE 393

Query: 463 KLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNN 522
            + +KG+ P V TY+ +I G  R G    A+  L  M++ G   +VVT+N L+       
Sbjct: 394 AMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKG 453

Query: 523 KTSKVVELLHKMAEPERNLVPDDTTFSIVV 552
           +  K V+LL +M+E    L P+  T++ ++
Sbjct: 454 EVRKAVKLLDEMSEV--GLEPNHLTYNTII 481



 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 98/336 (29%), Positives = 169/336 (50%), Gaps = 19/336 (5%)

Query: 50  KSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPD 109
           K G  N+         M     SP   +F +L     KN +  A +  + ++   G+   
Sbjct: 239 KGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAAS 298

Query: 110 FLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLS 169
            +T N LI+       GLC E +++E   L + M   G+ P+ IT+G ++ GFC+ G ++
Sbjct: 299 VVTYNSLIS-------GLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMA 351

Query: 170 VALRLHKKMVSGDYENGLISKT---NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINP 226
            A          D+ +G+  +    ++  Y+I+ID   + G ++ A  +   M  +GI+P
Sbjct: 352 DA---------NDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISP 402

Query: 227 AVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLL 286
            V     LI GF  +G+W   +GL  EM + G   +++T+NV+I  LC  G++ +A  LL
Sbjct: 403 NVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLL 462

Query: 287 ELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKI 346
           + M + GL P+  TYN+++ G+C  G I +A EI   M     +  VV+YN+ I  +C+I
Sbjct: 463 DEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQI 522

Query: 347 LNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAG 382
             ++EA  L  +++   +    ITY T+  G+ + G
Sbjct: 523 GKMDEANDLLNEMLDKCLVPNGITYETIKEGMMEKG 558



 Score =  154 bits (390), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 86/299 (28%), Positives = 155/299 (51%), Gaps = 5/299 (1%)

Query: 260 RPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTARE 319
           RP+  + N ++  L    +++ A       ++R ++PD +T+N+++ G C +G++  A +
Sbjct: 153 RPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGD 212

Query: 320 IFLSMHSKGCKHTVVSYNILINGYCK---ILNVEEAMSLYRQIISNGVRQTVITYNTLLS 376
           +   + + G   +V +YN LI+GYCK     N+     L ++++  G+  T +T+  L++
Sbjct: 213 VAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLIN 272

Query: 377 GLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEF 436
           G  +      A ++F+EMK   +   + TYN LI GLC    V+E VKL   +E      
Sbjct: 273 GYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSP 332

Query: 437 GIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFL 496
               F C++ G CK G + +A +    + ++ + P VV Y+I+I    R GK+E A    
Sbjct: 333 NEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVK 392

Query: 497 LYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLL 555
             M K G +PNV T+N L+ GF ++        LL +M   E+ +  D  T+++++  L
Sbjct: 393 EAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMK--EKGIEADVVTYNVLIGAL 449



 Score = 79.3 bits (194), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 48/167 (28%), Positives = 81/167 (48%), Gaps = 5/167 (2%)

Query: 400 EPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWE 459
            P  S+ N L+ GL     V  A K F      +    I  FN +I GLC+ G+L  A +
Sbjct: 153 RPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGD 212

Query: 460 LFHKLPQKGLVPTVVTYSIMIHGLCRK---GKLEKANDFLLYMEKNGCAPNVVTFNTLMH 516
           +   +   GL P+V TY+ +I G C+K   G +   +  L  M + G +P  VTF  L++
Sbjct: 213 VAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLIN 272

Query: 517 GFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
           G+ +N+ T+  V +  +M   ++ +     T++ ++  L  + K  E
Sbjct: 273 GYCKNSNTAAAVRVFEEMK--QQGIAASVVTYNSLISGLCSEGKVEE 317



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 44/188 (23%), Positives = 85/188 (45%), Gaps = 13/188 (6%)

Query: 72  SPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVEN 131
           SP ++++N L    +++  + +      ++   G+  D +T N+LI         LC + 
Sbjct: 401 SPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIG-------ALCCKG 453

Query: 132 RIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKT 191
            +++A  L   M   G+ P+ +TY T+I GFC  GN+  A  +  +M           + 
Sbjct: 454 EVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRM------EKCRKRA 507

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
           N+ +Y++ I   C+ G +D+A +L  EM  + + P  +   T+  G    G   ++ G  
Sbjct: 508 NVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEGMMEKGYTPDIRGCT 567

Query: 252 IEMLDLGP 259
           +      P
Sbjct: 568 VSQASENP 575


>gi|297809467|ref|XP_002872617.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297318454|gb|EFH48876.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 584

 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 136/488 (27%), Positives = 246/488 (50%), Gaps = 17/488 (3%)

Query: 65  YMTHMQPSPPISS-FNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNK 123
           Y+T  + S   S  + ++  A  +++  D+ I ++ ++V  G +P         NCF N 
Sbjct: 83  YLTESETSKTKSRLYEVIINAYVQSQSLDSSIYYFNEMVDKGFVPG-------SNCFNNL 135

Query: 124 ERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDY 183
                V +      W F N     V  DV ++G +I G C  G +  +  L  ++    +
Sbjct: 136 -LTFVVGSSSFNQWWCFFNESKIKVVLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGF 194

Query: 184 ENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGN 243
                   N+  Y+ +ID  CK+G ++KAK+LF EM   G+       T LIHG    G 
Sbjct: 195 ------SPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGI 248

Query: 244 WEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNS 303
            ++   ++ +M + G  PNL T+N +++ LCK G+  +A  + + M +RG++ +  TYN+
Sbjct: 249 KKQGFEMYEKMQEHGVFPNLHTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNT 308

Query: 304 LMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNG 363
           L+ G C   + + A E+   M S G    +++YN LI+G+C +  + +A+SL R + S G
Sbjct: 309 LIGGLCREMKANEANEVMDQMKSDGINPNLITYNTLIDGFCGVRKLGKALSLCRDLKSRG 368

Query: 364 VRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAV 423
           +  +++TYN L+SG  + G    A K+  EM+   ++P   TY ILID   +++ +++A+
Sbjct: 369 LSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKVTYTILIDTFARSDNMEKAI 428

Query: 424 KLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGL 483
           +L   +E       +  ++ LI G C  GR++ A  LF  + +K   P  V Y+ M+ G 
Sbjct: 429 QLRSSMEELGLTPDVHTYSVLIHGFCIKGRMNEASRLFKSMVEKKFEPNEVIYNTMVLGY 488

Query: 484 CRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVP 543
           C++G   +A      ME+    PNV ++  ++    +  K+ +   L+ KM +    + P
Sbjct: 489 CKEGSSYRALRLFREMEEKELPPNVASYRYMIEVLCKERKSKEAEGLVEKMIDS--GIGP 546

Query: 544 DDTTFSIV 551
            D+  +++
Sbjct: 547 SDSILNLI 554



 Score =  214 bits (546), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 119/376 (31%), Positives = 198/376 (52%), Gaps = 2/376 (0%)

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
           +++S+ I+I   C+ G ++K+ +L +E++  G +P VV+ TTLI G C  G  E+   LF
Sbjct: 162 DVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLF 221

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
            EM   G   N  T+ V+I  L K G   +   + E M + G+ P+  TYN +M+  C  
Sbjct: 222 FEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLHTYNCVMNQLCKD 281

Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
           GR   A ++F  M  +G    +V+YN LI G C+ +   EA  +  Q+ S+G+   +ITY
Sbjct: 282 GRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANEVMDQMKSDGINPNLITY 341

Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
           NTL+ G     + G A  L  ++K   + P L TYNIL+ G CK      A K+   +E 
Sbjct: 342 NTLIDGFCGVRKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEE 401

Query: 432 NKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEK 491
              +     +  LID   ++  ++ A +L   + + GL P V TYS++IHG C KG++ +
Sbjct: 402 RGIKPSKVTYTILIDTFARSDNMEKAIQLRSSMEELGLTPDVHTYSVLIHGFCIKGRMNE 461

Query: 492 ANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIV 551
           A+     M +    PN V +NT++ G+ +   + + + L  +M E E  L P+  ++  +
Sbjct: 462 ASRLFKSMVEKKFEPNEVIYNTMVLGYCKEGSSYRALRLFREMEEKE--LPPNVASYRYM 519

Query: 552 VDLLAKDEKYHECSAV 567
           +++L K+ K  E   +
Sbjct: 520 IEVLCKERKSKEAEGL 535



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 109/391 (27%), Positives = 194/391 (49%), Gaps = 21/391 (5%)

Query: 189 SKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPA---------VVVCTTLIHGFC 239
           SKT    Y +II++  +   +D +   F EM  +G  P           VV ++  + + 
Sbjct: 90  SKTKSRLYEVIINAYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWW 149

Query: 240 CAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRF 299
           C  N  ++  +           ++ +F ++I   C+ G+I ++  LL  + + G +P+  
Sbjct: 150 CFFNESKIKVVL----------DVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVV 199

Query: 300 TYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQI 359
            Y +L+DG C  G I+ A+++F  M   G      +Y +LI+G  K    ++   +Y ++
Sbjct: 200 IYTTLIDGCCKKGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKM 259

Query: 360 ISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCV 419
             +GV   + TYN +++ L + G+   A K+FDEM+   V  ++ TYN LI GLC+    
Sbjct: 260 QEHGVFPNLHTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKA 319

Query: 420 QEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIM 479
            EA ++   ++ +     +  +N LIDG C   +L  A  L   L  +GL P++VTY+I+
Sbjct: 320 NEANEVMDQMKSDGINPNLITYNTLIDGFCGVRKLGKALSLCRDLKSRGLSPSLVTYNIL 379

Query: 480 IHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPER 539
           + G C+KG    A   +  ME+ G  P+ VT+  L+  F +++   K ++L   M E   
Sbjct: 380 VSGFCKKGDTSGAGKVVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRSSMEE--L 437

Query: 540 NLVPDDTTFSIVVDLLAKDEKYHECSAVSKS 570
            L PD  T+S+++       + +E S + KS
Sbjct: 438 GLTPDVHTYSVLIHGFCIKGRMNEASRLFKS 468


>gi|297817834|ref|XP_002876800.1| hypothetical protein ARALYDRAFT_484139 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297322638|gb|EFH53059.1| hypothetical protein ARALYDRAFT_484139 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1010

 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 128/406 (31%), Positives = 212/406 (52%), Gaps = 13/406 (3%)

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
           ++EA   F  M  F V P   +   L++ F + G      R  K M+      G  +K  
Sbjct: 41  VEEAIQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGVKRFFKDMI------GAGAKPT 94

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
           +F+Y+I+ID +CKEG V+ A+ LF EMK RG+ P  V   ++I GF   G  ++    F 
Sbjct: 95  VFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLIPDTVTYNSMIDGFGKVGRLDDTVCFFE 154

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
           EM D+   P+++T+N +I+C CK GK+ +       M + GL P+  +Y++L+D +C  G
Sbjct: 155 EMKDMCCEPDVITYNALINCFCKFGKLPKGLEFFREMKRNGLKPNVVSYSTLVDAFCKEG 214

Query: 313 RIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYN 372
            +  A + ++ M   G      +Y  LI+ YCKI N+ +A  L  +++  GV   V+TY 
Sbjct: 215 MMQQAIKFYVDMRRVGLVPNEYTYTSLIDAYCKIGNLSDAFRLANEMLQVGVEWNVVTYT 274

Query: 373 TLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMN 432
            L+ GL           L DEM   +++  + T+ +LIDGLCKN  V +A+  F  +   
Sbjct: 275 ALIDGLCGWENPTEGLHLLDEMVELDIKVTVVTFCVLIDGLCKNKLVSKAIDYFGRISN- 333

Query: 433 KFEFGIE----IFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGK 488
             +FG++    I+  +IDGLCK  +++ A  LF ++ QKGLVP    Y+ ++ G  ++G 
Sbjct: 334 --DFGLQANAAIYTAMIDGLCKGNQVEAATTLFEQMAQKGLVPDRTAYTSLMDGNFKQGN 391

Query: 489 LEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKM 534
           + +A      M + G   +++ + +L+ G    N+  K    L +M
Sbjct: 392 VLEALALRDKMVETGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEM 437



 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 113/359 (31%), Positives = 190/359 (52%), Gaps = 7/359 (1%)

Query: 196 YSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEML 255
           +S++ID     G+V++A + F +MK   + P    C  L+H F   G  + V   F +M+
Sbjct: 32  FSVLIDL----GMVEEAIQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGVKRFFKDMI 87

Query: 256 DLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRID 315
             G +P + T+N+MIDC+CK G +  A GL E M  RGL PD  TYNS++DG+  VGR+D
Sbjct: 88  GAGAKPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLIPDTVTYNSMIDGFGKVGRLD 147

Query: 316 TAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLL 375
                F  M    C+  V++YN LIN +CK   + + +  +R++  NG++  V++Y+TL+
Sbjct: 148 DTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPKGLEFFREMKRNGLKPNVVSYSTLV 207

Query: 376 SGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFE 435
               + G    A K + +M+   + P+  TY  LID  CK   + +A +L + +     E
Sbjct: 208 DAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDAYCKIGNLSDAFRLANEMLQVGVE 267

Query: 436 FGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDF 495
           + +  +  LIDGLC          L  ++ +  +  TVVT+ ++I GLC+   + KA D+
Sbjct: 268 WNVVTYTALIDGLCGWENPTEGLHLLDEMVELDIKVTVVTFCVLIDGLCKNKLVSKAIDY 327

Query: 496 LLYMEKN-GCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
              +  + G   N   +  ++ G  + N+      L  +MA  ++ LVPD T ++ ++D
Sbjct: 328 FGRISNDFGLQANAAIYTAMIDGLCKGNQVEAATTLFEQMA--QKGLVPDRTAYTSLMD 384



 Score =  181 bits (460), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 119/420 (28%), Positives = 200/420 (47%), Gaps = 14/420 (3%)

Query: 56  LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNI 115
           + EA   F  M   +  P   S N L    AK    D V  F++ ++  G  P   T NI
Sbjct: 41  VEEAIQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGVKRFFKDMIGAGAKPTVFTYNI 100

Query: 116 LINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLH 175
           +I+C       +C E  ++ A  LF+ M   G+ PD +TY ++I+GF + G L   +   
Sbjct: 101 MIDC-------MCKEGDVEAARGLFEEMKFRGLIPDTVTYNSMIDGFGKVGRLDDTVCFF 153

Query: 176 KKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLI 235
           ++M        +  + ++ +Y+ +I+  CK G + K  E F EMK  G+ P VV  +TL+
Sbjct: 154 EEM------KDMCCEPDVITYNALINCFCKFGKLPKGLEFFREMKRNGLKPNVVSYSTLV 207

Query: 236 HGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLN 295
             FC  G  ++    +++M  +G  PN  T+  +ID  CK G +++A  L   M+Q G+ 
Sbjct: 208 DAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDAYCKIGNLSDAFRLANEMLQVGVE 267

Query: 296 PDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSL 355
            +  TY +L+DG C          +   M     K TVV++ +LI+G CK   V +A+  
Sbjct: 268 WNVVTYTALIDGLCGWENPTEGLHLLDEMVELDIKVTVVTFCVLIDGLCKNKLVSKAIDY 327

Query: 356 YRQIISN-GVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLC 414
           + +I ++ G++     Y  ++ GL +  Q   A  LF++M    + PD + Y  L+DG  
Sbjct: 328 FGRISNDFGLQANAAIYTAMIDGLCKGNQVEAATTLFEQMAQKGLVPDRTAYTSLMDGNF 387

Query: 415 KNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVV 474
           K   V EA+ L   +     +  +  +  L+ GL    +L  A     ++  +G+ P  V
Sbjct: 388 KQGNVLEALALRDKMVETGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEV 447



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 107/378 (28%), Positives = 183/378 (48%), Gaps = 16/378 (4%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CK G  ++  AR  F  M      P   ++N +     K    D  + F+ ++  +   P
Sbjct: 106 CKEG--DVEAARGLFEEMKFRGLIPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEP 163

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           D +T N LINCF       C   ++ +    F+ M   G++P+V++Y TL++ FC+ G +
Sbjct: 164 DVITYNALINCF-------CKFGKLPKGLEFFREMKRNGLKPNVVSYSTLVDAFCKEGMM 216

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
             A++ +  M       GL+   N ++Y+ +ID+ CK G +  A  L  EM   G+   V
Sbjct: 217 QQAIKFYVDM----RRVGLVP--NEYTYTSLIDAYCKIGNLSDAFRLANEMLQVGVEWNV 270

Query: 229 VVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEA-NGLLE 287
           V  T LI G C   N  E   L  EM++L  +  ++TF V+ID LCK   +++A +    
Sbjct: 271 VTYTALIDGLCGWENPTEGLHLLDEMVELDIKVTVVTFCVLIDGLCKNKLVSKAIDYFGR 330

Query: 288 LMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKIL 347
           +    GL  +   Y +++DG C   +++ A  +F  M  KG      +Y  L++G  K  
Sbjct: 331 ISNDFGLQANAAIYTAMIDGLCKGNQVEAATTLFEQMAQKGLVPDRTAYTSLMDGNFKQG 390

Query: 348 NVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYN 407
           NV EA++L  +++  G++  ++ Y +L+ GL    Q   A+   +EM    + PD     
Sbjct: 391 NVLEALALRDKMVETGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCI 450

Query: 408 ILIDGLCKNNCVQEAVKL 425
            ++    +  C+ EAV+L
Sbjct: 451 SVLKKHYELGCINEAVEL 468



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 117/450 (26%), Positives = 184/450 (40%), Gaps = 90/450 (20%)

Query: 37  PETQ-LNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVI 95
           P+T+  N  LH+  K G    +  + FF  M      P + ++N++   + K    +A  
Sbjct: 58  PKTRSCNGLLHKFAKLG--KTDGVKRFFKDMIGAGAKPTVFTYNIMIDCMCKEGDVEAAR 115

Query: 96  SFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITY 155
             + ++   GL+PD +T N +I+ FG          R+ +    F+ M      PDVITY
Sbjct: 116 GLFEEMKFRGLIPDTVTYNSMIDGFGKV-------GRLDDTVCFFEEMKDMCCEPDVITY 168

Query: 156 GTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKEL 215
             LIN FC+ G L   L   ++M      NGL  K N+ SYS ++D+ CKEG++ +A + 
Sbjct: 169 NALINCFCKFGKLPKGLEFFREM----KRNGL--KPNVVSYSTLVDAFCKEGMMQQAIKF 222

Query: 216 FLEMKGRGINPA-----------------------------------VVVCTTLIHGFCC 240
           +++M+  G+ P                                    VV  T LI G C 
Sbjct: 223 YVDMRRVGLVPNEYTYTSLIDAYCKIGNLSDAFRLANEMLQVGVEWNVVTYTALIDGLCG 282

Query: 241 AGNWEEVNGLFIEML------------------------------------DLGPRPNLL 264
             N  E   L  EM+                                    D G + N  
Sbjct: 283 WENPTEGLHLLDEMVELDIKVTVVTFCVLIDGLCKNKLVSKAIDYFGRISNDFGLQANAA 342

Query: 265 TFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSM 324
            +  MID LCKG ++  A  L E M Q+GL PDR  Y SLMDG    G +  A  +   M
Sbjct: 343 IYTAMIDGLCKGNQVEAATTLFEQMAQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKM 402

Query: 325 HSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAG-- 382
              G K  +++Y  L+ G      +++A S   ++I  G+    +   ++L   ++ G  
Sbjct: 403 VETGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCI 462

Query: 383 -QAGYAQKLFDEMKLYNVEPDLSTYNILID 411
            +A   Q    + +L   + D +  NI +D
Sbjct: 463 NEAVELQSYLMKHQLLTSDNDNALPNIYLD 492



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 84/299 (28%), Positives = 145/299 (48%), Gaps = 2/299 (0%)

Query: 261 PNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREI 320
           P    F+ +   L   G + EA      M +  + P   + N L+  +  +G+ D  +  
Sbjct: 23  PGFGVFDALFSVLIDLGMVEEAIQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGVKRF 82

Query: 321 FLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQ 380
           F  M   G K TV +YNI+I+  CK  +VE A  L+ ++   G+    +TYN+++ G  +
Sbjct: 83  FKDMIGAGAKPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLIPDTVTYNSMIDGFGK 142

Query: 381 AGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEI 440
            G+       F+EMK    EPD+ TYN LI+  CK   + + ++ F  ++ N  +  +  
Sbjct: 143 VGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPKGLEFFREMKRNGLKPNVVS 202

Query: 441 FNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYME 500
           ++ L+D  CK G +  A + +  + + GLVP   TY+ +I   C+ G L  A      M 
Sbjct: 203 YSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDAYCKIGNLSDAFRLANEML 262

Query: 501 KNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDE 559
           + G   NVVT+  L+ G       ++ + LL +M E +  +     TF +++D L K++
Sbjct: 263 QVGVEWNVVTYTALIDGLCGWENPTEGLHLLDEMVELDIKVTV--VTFCVLIDGLCKNK 319


>gi|449513353|ref|XP_004164304.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g06920-like [Cucumis sativus]
          Length = 904

 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 152/537 (28%), Positives = 247/537 (45%), Gaps = 41/537 (7%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CK+    LNEA   F +M   +  P   ++N +         ++   S   +    G +P
Sbjct: 316 CKAD--RLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIP 373

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
             ++ N +++C G K        ++ EA   F+ M    + P++ TY  +I+  C+ G L
Sbjct: 374 SVVSYNCILSCLGRK-------GQVDEALKKFEEMKKDAI-PNLSTYNIMIDMLCKAGKL 425

Query: 169 SVALRLHKKMV-SGDYEN-------------------------GLISKT---NIFSYSII 199
             AL +   M  +G + N                         GL  KT   +  +Y  +
Sbjct: 426 ETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSL 485

Query: 200 IDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGP 259
           I+ L + G VD+A +L+ +M      P  VV T+LI  F   G  E+ + ++ EML LG 
Sbjct: 486 IEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGC 545

Query: 260 RPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTARE 319
            P+LL  N  +DC+ K G+I +   L + +   G  PD  +Y  L+ G    G    A E
Sbjct: 546 SPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYE 605

Query: 320 IFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLF 379
           +F +M  +GC     +YN +I+G+CK   V +A  L  ++ + G   TV+TY +++ GL 
Sbjct: 606 LFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLA 665

Query: 380 QAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIE 439
           +  +   A  LF+E K   +E ++  Y+ LIDG  K   + EA  +   L        + 
Sbjct: 666 KIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVY 725

Query: 440 IFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYM 499
            +NCL+D L KA  +  A   F  +      P  +TYSI+IHGLC+  K  KA  F   M
Sbjct: 726 TWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEM 785

Query: 500 EKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLA 556
           +K G  PNV T+ T++ G  +     +   L  K    E+  V D   ++ +++ L+
Sbjct: 786 QKQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKF--KEKGGVADSAIYNAIIEGLS 840



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 150/532 (28%), Positives = 253/532 (47%), Gaps = 41/532 (7%)

Query: 62  FFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFG 121
            F  M  +  +  +  F  L    A+    DA +S   ++ S  L PD +  N+ I+CFG
Sbjct: 222 LFQQMQELGYAVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLEPDVVLYNVCIDCFG 281

Query: 122 NKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKM--- 178
                     ++  A   F  M A G+  D +TY ++I   C+   L+ A+ L + M   
Sbjct: 282 KA-------GKVDMAWKXFHEMKANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQN 334

Query: 179 -----------------VSGDYENG--LISKT-------NIFSYSIIIDSLCKEGLVDKA 212
                            ++G +E+   L+ +        ++ SY+ I+  L ++G VD+A
Sbjct: 335 KQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEA 394

Query: 213 KELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDC 272
            + F EMK   I P +     +I   C AG  E    +   M D G  PN++T N+M+D 
Sbjct: 395 LKKFEEMKKDAI-PNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDR 453

Query: 273 LCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHT 332
           LCK  ++++A  + E +  +   PD  TY SL++G    GR+D A +++  M        
Sbjct: 454 LCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPN 513

Query: 333 VVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFD 392
            V Y  LI  + K    E+   +Y +++  G    ++  NT +  +F+AG+    + LF 
Sbjct: 514 AVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQ 573

Query: 393 EMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAG 452
           E+K     PD  +Y ILI GL K     EA +LF+ ++          +N +IDG CK+G
Sbjct: 574 EIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSG 633

Query: 453 RLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFN 512
           +++ A++L  ++  KG  PTVVTY  +I GL +  +L++A       +  G   NVV ++
Sbjct: 634 KVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYS 693

Query: 513 TLMHGFLQNNKTSKVVELLHKMAE-PERNLVPDDTTFSIVVDLLAKDEKYHE 563
           +L+ GF    K  ++ E    M E  ++ L P+  T++ ++D L K E+  E
Sbjct: 694 SLIDGF---GKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISE 742



 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 126/462 (27%), Positives = 238/462 (51%), Gaps = 15/462 (3%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
           P +S++N++   + K    +  +     +   GL P+ +T+NI+++        LC   R
Sbjct: 407 PNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVD-------RLCKAQR 459

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
           + +A  +F+ +     RPD +TY +LI G  R G +  A +L+++M+  +         N
Sbjct: 460 LDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDAN------QIPN 513

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
              Y+ +I +  K G  +   +++ EM   G +P +++  T +     AG  E+   LF 
Sbjct: 514 AVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQ 573

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
           E+ +LG  P+  ++ ++I  L K G  +EA  L   M ++G   D   YN+++DG+C  G
Sbjct: 574 EIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSG 633

Query: 313 RIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYN 372
           +++ A ++   M +KG + TVV+Y  +I+G  KI  ++EA  L+ +  S G+   V+ Y+
Sbjct: 634 KVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYS 693

Query: 373 TLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMN 432
           +L+ G  + G+   A  + +E+    + P++ T+N L+D L K   + EA+  F  ++  
Sbjct: 694 SLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDL 753

Query: 433 KFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKA 492
           K       ++ LI GLCK  + + A+  + ++ ++G  P V TY+ MI GL + G + +A
Sbjct: 754 KCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEA 813

Query: 493 ND-FLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHK 533
           +  F  + EK G A + + +N ++ G    N+ S    L  +
Sbjct: 814 DTLFEKFKEKGGVADSAI-YNAIIEGLSNANRASDAYRLFEE 854



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 130/513 (25%), Positives = 237/513 (46%), Gaps = 23/513 (4%)

Query: 55  NLNEARYFFGYMTHMQPSPPI-SSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLT- 112
           ++N A  +F +   +        ++N L   +A+ R ++ +     ++   G  P   T 
Sbjct: 109 DVNNAVNYFRWAERLTDRAHCREAYNSLLMVMARTRKFNCLEQILEEMSIAGFGPSNNTC 168

Query: 113 LNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVAL 172
           + I+++   ++        +++EA    + M     RP    Y  LI     + +    L
Sbjct: 169 IEIVLSFIKSR--------KLREAFTFIQTMRKLKFRPAFSAYTNLIGALSTSRDSDCML 220

Query: 173 RLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCT 232
            L ++M    Y        N+  ++ +I    +EG VD A  L  EMK   + P VV+  
Sbjct: 221 TLFQQMQELGY------AVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLEPDVVLYN 274

Query: 233 TLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQR 292
             I  F  AG  +     F EM   G   + +T+  MI  LCK  ++NEA  L E M Q 
Sbjct: 275 VCIDCFGKAGKVDMAWKXFHEMKANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQN 334

Query: 293 GLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEA 352
              P  + YN+++ GY + G+ + A  +      KGC  +VVSYN +++   +   V+EA
Sbjct: 335 KQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEA 394

Query: 353 MSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDG 412
           +  + ++  + +   + TYN ++  L +AG+   A  + D MK   + P++ T NI++D 
Sbjct: 395 LKKFEEMKKDAI-PNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDR 453

Query: 413 LCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPT 472
           LCK   + +A  +F  L+          +  LI+GL + GR+D A++L+ ++     +P 
Sbjct: 454 LCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPN 513

Query: 473 VVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLH 532
            V Y+ +I    + G+ E  +     M + GC+P+++  NT M    +  +  K   L  
Sbjct: 514 AVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQ 573

Query: 533 KMAEPERNL--VPDDTTFSIVVDLLAKDEKYHE 563
           ++    +NL  +PD  +++I++  L K    HE
Sbjct: 574 EI----KNLGFIPDARSYTILIHGLVKAGFAHE 602



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 111/360 (30%), Positives = 175/360 (48%), Gaps = 13/360 (3%)

Query: 98  YRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGT 157
           Y +++ +G  PD L LN  ++C             I++   LF+ +   G  PD  +Y  
Sbjct: 537 YNEMLRLGCSPDLLLLNTYMDCVFKA-------GEIEKGRALFQEIKNLGFIPDARSYTI 589

Query: 158 LINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFL 217
           LI+G  + G    A  L   M     E G +  T   +Y+ +ID  CK G V+KA +L  
Sbjct: 590 LIHGLVKAGFAHEAYELFYTM----KEQGCVLDTR--AYNTVIDGFCKSGKVNKAYQLLE 643

Query: 218 EMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGG 277
           EMK +G  P VV   ++I G       +E   LF E    G   N++ ++ +ID   K G
Sbjct: 644 EMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVG 703

Query: 278 KINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYN 337
           +I+EA  ++E ++Q+GL P+ +T+N L+D       I  A   F SM    C    ++Y+
Sbjct: 704 RIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYS 763

Query: 338 ILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLY 397
           ILI+G CKI    +A   ++++   G +  V TY T++SGL +AG    A  LF++ K  
Sbjct: 764 ILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFKEK 823

Query: 398 NVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNA 457
               D + YN +I+GL   N   +A +LF    +       +    L+D L KA  ++ A
Sbjct: 824 GGVADSAIYNAIIEGLSNANRASDAYRLFEEARLKGCSIYTKTCVVLLDSLHKAECIEQA 883



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 85/316 (26%), Positives = 143/316 (45%), Gaps = 3/316 (0%)

Query: 265 TFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSM 324
            +N ++  + +  K N    +LE M   G  P   T   ++  +    ++  A     +M
Sbjct: 132 AYNSLLMVMARTRKFNCLEQILEEMSIAGFGPSNNTCIEIVLSFIKSRKLREAFTFIQTM 191

Query: 325 HSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQA 384
                +    +Y  LI       + +  ++L++Q+   G    V  + TL+    + G+ 
Sbjct: 192 RKLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGRV 251

Query: 385 GYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCL 444
             A  L DEMK  ++EPD+  YN+ ID   K   V  A K FH ++ N        +  +
Sbjct: 252 DAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKXFHEMKANGLVLDDVTYTSM 311

Query: 445 IDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGC 504
           I  LCKA RL+ A ELF  + Q   VP    Y+ MI G    GK E A   L    + GC
Sbjct: 312 IGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGC 371

Query: 505 APNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHEC 564
            P+VV++N ++       +  +V E L K  E +++ +P+ +T++I++D+L K  K    
Sbjct: 372 IPSVVSYNCILSCL---GRKGQVDEALKKFEEMKKDAIPNLSTYNIMIDMLCKAGKLETA 428

Query: 565 SAVSKSSYRACLYVTI 580
             V  +   A L+  +
Sbjct: 429 LVVRDAMKDAGLFPNV 444


>gi|18087893|gb|AAL59047.1|AC087182_30 putative membrane-associated salt-inducible protein,3'-partial
           [Oryza sativa Japonica Group]
          Length = 571

 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 135/430 (31%), Positives = 217/430 (50%), Gaps = 16/430 (3%)

Query: 61  YFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCF 120
           +     +H +  P  SS N L   +   +  D     +R  +   + PD  T N +I+  
Sbjct: 142 FLLAGESHPRHRPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVIS-- 199

Query: 121 GNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCR---TGNLSVALRLHKK 177
                GLC   ++++A  + K++ A+G+ P V TY +LI+G+C+    GN+     L K+
Sbjct: 200 -----GLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKE 254

Query: 178 MVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHG 237
           MV    E G IS T + ++ ++I+  CK      A  +F EMK +GI  +VV   +LI G
Sbjct: 255 MV----EAG-ISPTAV-TFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISG 308

Query: 238 FCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPD 297
            C  G  EE   L  EM DLG  PN +TF  ++   CK G + +AN  ++ M +R + PD
Sbjct: 309 LCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPD 368

Query: 298 RFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYR 357
              YN L+D Y  +G+++ A  +  +M  KG    V +YN LI G+ +  +   A  L  
Sbjct: 369 VVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLD 428

Query: 358 QIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNN 417
           ++   G+   V+TYN L+  L   G+   A KL DEM    +EP+  TYN +I G C   
Sbjct: 429 EMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKG 488

Query: 418 CVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYS 477
            ++ A ++   +E  +    +  +N  I   C+ G++D A +L +++  K LVP  +TY 
Sbjct: 489 NIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYE 548

Query: 478 IMIHGLCRKG 487
            +  G+  KG
Sbjct: 549 TIKEGMMEKG 558



 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 128/405 (31%), Positives = 206/405 (50%), Gaps = 9/405 (2%)

Query: 126 GLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYEN 185
           GL    R+  A   F++ +   V PD+ T+ T+I+G CR G L  A  + K + +     
Sbjct: 165 GLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDVAKDIKAW---- 220

Query: 186 GLISKTNIFSYSIIIDSLCKEGLVDK---AKELFLEMKGRGINPAVVVCTTLIHGFCCAG 242
           GL    ++ +Y+ +ID  CK+G          L  EM   GI+P  V    LI+G+C   
Sbjct: 221 GL--APSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNS 278

Query: 243 NWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYN 302
           N      +F EM   G   +++T+N +I  LC  GK+ E   L+E M   GL+P+  T+ 
Sbjct: 279 NTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFG 338

Query: 303 SLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISN 362
            ++ G+C  G +  A +    M  +  +  VV YNILI+ Y ++  +E+AM++   +   
Sbjct: 339 CVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKK 398

Query: 363 GVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEA 422
           G+   V TYN L++G  ++G    A  L DEMK   +E D+ TYN+LI  LC    V++A
Sbjct: 399 GISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKA 458

Query: 423 VKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHG 482
           VKL   +     E     +N +I G C  G + +A+E+  ++ +      VVTY++ I  
Sbjct: 459 VKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKY 518

Query: 483 LCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKV 527
            C+ GK+++AND L  M      PN +T+ T+  G ++   T  +
Sbjct: 519 FCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEGMMEKGYTPDI 563



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 102/348 (29%), Positives = 172/348 (49%), Gaps = 3/348 (0%)

Query: 190 KTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNG 249
           + +  S + ++  L     VD A++ F     R ++P +    T+I G C  G   +   
Sbjct: 153 RPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGD 212

Query: 250 LFIEMLDLGPRPNLLTFNVMIDCLCK---GGKINEANGLLELMIQRGLNPDRFTYNSLMD 306
           +  ++   G  P++ T+N +ID  CK    G +   + LL+ M++ G++P   T+  L++
Sbjct: 213 VAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLIN 272

Query: 307 GYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQ 366
           GYC       A  +F  M  +G   +VV+YN LI+G C    VEE + L  ++   G+  
Sbjct: 273 GYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSP 332

Query: 367 TVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLF 426
             IT+  +L G  + G    A    D M   NVEPD+  YNILID   +   +++A+ + 
Sbjct: 333 NEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVK 392

Query: 427 HMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRK 486
             +        +  +NCLI G  ++G   +A  L  ++ +KG+   VVTY+++I  LC K
Sbjct: 393 EAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCK 452

Query: 487 GKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKM 534
           G++ KA   L  M + G  PN +T+NT++ GF          E+  +M
Sbjct: 453 GEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRM 500



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 97/330 (29%), Positives = 165/330 (50%), Gaps = 5/330 (1%)

Query: 226 PAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGL 285
           P+      L+ G   A   +     F   L     P++ TFN +I  LC+ G++ +A  +
Sbjct: 154 PSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDV 213

Query: 286 LELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFL---SMHSKGCKHTVVSYNILING 342
            + +   GL P   TYNSL+DGYC  G       + +    M   G   T V++ +LING
Sbjct: 214 AKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLING 273

Query: 343 YCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPD 402
           YCK  N   A+ ++ ++   G+  +V+TYN+L+SGL   G+     KL +EM+   + P+
Sbjct: 274 YCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPN 333

Query: 403 LSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFH 462
             T+  ++ G CK   + +A      +     E  + I+N LID   + G++++A  +  
Sbjct: 334 EITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKE 393

Query: 463 KLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNN 522
            + +KG+ P V TY+ +I G  R G    A+  L  M++ G   +VVT+N L+       
Sbjct: 394 AMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKG 453

Query: 523 KTSKVVELLHKMAEPERNLVPDDTTFSIVV 552
           +  K V+LL +M+E    L P+  T++ ++
Sbjct: 454 EVRKAVKLLDEMSEV--GLEPNHLTYNTII 481



 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 98/336 (29%), Positives = 169/336 (50%), Gaps = 19/336 (5%)

Query: 50  KSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPD 109
           K G  N+         M     SP   +F +L     KN +  A +  + ++   G+   
Sbjct: 239 KGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAAS 298

Query: 110 FLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLS 169
            +T N LI+       GLC E +++E   L + M   G+ P+ IT+G ++ GFC+ G ++
Sbjct: 299 VVTYNSLIS-------GLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMA 351

Query: 170 VALRLHKKMVSGDYENGLISKT---NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINP 226
            A          D+ +G+  +    ++  Y+I+ID   + G ++ A  +   M  +GI+P
Sbjct: 352 DA---------NDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISP 402

Query: 227 AVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLL 286
            V     LI GF  +G+W   +GL  EM + G   +++T+NV+I  LC  G++ +A  LL
Sbjct: 403 NVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLL 462

Query: 287 ELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKI 346
           + M + GL P+  TYN+++ G+C  G I +A EI   M     +  VV+YN+ I  +C+I
Sbjct: 463 DEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQI 522

Query: 347 LNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAG 382
             ++EA  L  +++   +    ITY T+  G+ + G
Sbjct: 523 GKMDEANDLLNEMLDKCLVPNGITYETIKEGMMEKG 558



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 86/299 (28%), Positives = 155/299 (51%), Gaps = 5/299 (1%)

Query: 260 RPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTARE 319
           RP+  + N ++  L    +++ A       ++R ++PD +T+N+++ G C +G++  A +
Sbjct: 153 RPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGD 212

Query: 320 IFLSMHSKGCKHTVVSYNILINGYCK---ILNVEEAMSLYRQIISNGVRQTVITYNTLLS 376
           +   + + G   +V +YN LI+GYCK     N+     L ++++  G+  T +T+  L++
Sbjct: 213 VAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLIN 272

Query: 377 GLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEF 436
           G  +      A ++F+EMK   +   + TYN LI GLC    V+E VKL   +E      
Sbjct: 273 GYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSP 332

Query: 437 GIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFL 496
               F C++ G CK G + +A +    + ++ + P VV Y+I+I    R GK+E A    
Sbjct: 333 NEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVK 392

Query: 497 LYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLL 555
             M K G +PNV T+N L+ GF ++        LL +M   E+ +  D  T+++++  L
Sbjct: 393 EAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMK--EKGIEADVVTYNVLIGAL 449



 Score = 79.3 bits (194), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 48/167 (28%), Positives = 81/167 (48%), Gaps = 5/167 (2%)

Query: 400 EPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWE 459
            P  S+ N L+ GL     V  A K F      +    I  FN +I GLC+ G+L  A +
Sbjct: 153 RPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGD 212

Query: 460 LFHKLPQKGLVPTVVTYSIMIHGLCRK---GKLEKANDFLLYMEKNGCAPNVVTFNTLMH 516
           +   +   GL P+V TY+ +I G C+K   G +   +  L  M + G +P  VTF  L++
Sbjct: 213 VAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLIN 272

Query: 517 GFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
           G+ +N+ T+  V +  +M   ++ +     T++ ++  L  + K  E
Sbjct: 273 GYCKNSNTAAAVRVFEEMK--QQGIAASVVTYNSLISGLCSEGKVEE 317



 Score = 75.9 bits (185), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 61/236 (25%), Positives = 98/236 (41%), Gaps = 15/236 (6%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CK G+  + +A  +   MT     P +  +N+L     +    +  ++    +   G+ P
Sbjct: 345 CKKGM--MADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISP 402

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           +  T N LI  F             + A+ L   M   G+  DV+TY  LI   C  G +
Sbjct: 403 NVTTYNCLITGFSR-------SGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEV 455

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
             A++L  +M     E GL  + N  +Y+ II   C +G +  A E+   M+       V
Sbjct: 456 RKAVKLLDEM----SEVGL--EPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANV 509

Query: 229 VVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANG 284
           V     I  FC  G  +E N L  EMLD    PN +T+  + + + + G   +  G
Sbjct: 510 VTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEGMMEKGYTPDIRG 565


>gi|449519270|ref|XP_004166658.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g19440, chloroplastic-like [Cucumis sativus]
          Length = 799

 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 140/509 (27%), Positives = 253/509 (49%), Gaps = 26/509 (5%)

Query: 51  SGIINLNEARYFFGYMTHMQP-------SPPISSFNLLFGAVAKNRHYDAVISFYRKLVS 103
           +G+I LN    FF  + H+         +P +  FN L     K  + +  +     ++S
Sbjct: 298 NGLIKLN----FFDKVNHILDEMIGAGFNPNVVVFNNLIDGYCKMGNIEGALKIKDVMIS 353

Query: 104 IGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFC 163
             + P  +TL  L+       +G C  ++I+ A    + +++ G+        ++++  C
Sbjct: 354 KNITPTSVTLYSLM-------QGFCKSDQIEHAENALEEILSSGLSIHPDNCYSVVHWLC 406

Query: 164 RTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRG 223
           +      A R  K M+S ++      + +    ++++  LCK+G   +A EL+  +  +G
Sbjct: 407 KKFRYHSAFRFTKMMLSRNF------RPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKG 460

Query: 224 INPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEAN 283
              + V    LIHG C AG   E + +  EML+ G   + +T+N +I   C  GK+    
Sbjct: 461 SPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCF 520

Query: 284 GLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGY 343
            L E M +RG+ PD +TYN L+ G C VG++D A +++    + G    + +Y I++ GY
Sbjct: 521 RLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGY 580

Query: 344 CKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDL 403
           CK   +E+  +L+ +++S  +    I YN ++    Q G    A +L + MK   + P+ 
Sbjct: 581 CKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNC 640

Query: 404 STYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHK 463
           +TY+ LI G+C    V++A  L   +    F   +  +  LI G CK G++D A   + +
Sbjct: 641 ATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLE 700

Query: 464 LPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNK 523
           +    + P   TY++MI G C+ G +EKAN+ L+ M+++G  P+VVT+N L +GF + N 
Sbjct: 701 MISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVLTNGFCKAND 760

Query: 524 TSKVVELLHKMAEPERNLVPDDTTFSIVV 552
                ++  +MA     L  D+ T++ +V
Sbjct: 761 MDNAFKVCDQMA--TEGLPVDEITYTTLV 787



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 141/544 (25%), Positives = 242/544 (44%), Gaps = 56/544 (10%)

Query: 48  NCKSGIINLNEARYFFGYMTHMQPSPPISSFNLL---FGAVAKNRHYDAVISFYRKLVSI 104
           N  S   ++  A   FG  + +       +F+LL   +    +N  +   +  +  L   
Sbjct: 121 NLDSEKFHIEIANALFGLTSVVGRFEWTQAFDLLIHVYSTQFRNLGFSCAVDVFYLLARK 180

Query: 105 GLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCR 164
           G  P   T N  ++        L   N  ++   +F+ M + G  PDV ++  +IN  C+
Sbjct: 181 GTFPSLKTCNFXLS-------SLVKANEFEKCCEVFRVM-SEGACPDVFSFTNVINALCK 232

Query: 165 TGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGI 224
            G +  A+ L  KM        L    N+ +Y+ II+ LC+ G +D A EL  +M  +G+
Sbjct: 233 GGKMENAIELFMKM------EKLGISPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKGV 286

Query: 225 NPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANG 284
            P +     LI+G      +++VN +  EM+  G  PN++ FN +ID  CK G I  A  
Sbjct: 287 QPNLKTYGALINGLIKLNFFDKVNHILDEMIGAGFNPNVVVFNNLIDGYCKMGNIEGALK 346

Query: 285 LLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAR----EIF---LSMHSKGCKHTVVSY- 336
           + ++MI + + P   T  SLM G+C   +I+ A     EI    LS+H   C ++VV + 
Sbjct: 347 IKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDNC-YSVVHWL 405

Query: 337 ----------------------------NILINGYCKILNVEEAMSLYRQIISNGVRQTV 368
                                        +L+ G CK     EA  L+ +++  G   + 
Sbjct: 406 CKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPASK 465

Query: 369 ITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHM 428
           +T N L+ GL  AG+   A ++  EM    +  D  TYN LI G C    V+   +L   
Sbjct: 466 VTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREE 525

Query: 429 LEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGK 488
           +     +  I  +N L+ GLC  G+LD+A +L+ +    GL+  + TY IM+ G C+  +
Sbjct: 526 MTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANR 585

Query: 489 LEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTF 548
           +E   +    +       N + +N ++    QN   +  ++LL  M    + ++P+  T+
Sbjct: 586 IEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMK--SKGILPNCATY 643

Query: 549 SIVV 552
           S ++
Sbjct: 644 SSLI 647



 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 113/398 (28%), Positives = 195/398 (48%), Gaps = 13/398 (3%)

Query: 85  VAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMI 144
           + K   Y +   F + ++S    P  L L +L+ C      GLC + +  EAT L+  ++
Sbjct: 405 LCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLV-C------GLCKDGKHLEATELWFRLL 457

Query: 145 AFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLC 204
             G     +T   LI+G C  G L  A R+ K+M+    E GL    +  +Y+ +I   C
Sbjct: 458 EKGSPASKVTSNALIHGLCGAGKLPEASRIVKEML----ERGL--PMDRITYNALILGFC 511

Query: 205 KEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLL 264
            EG V+    L  EM  RGI P +     L+ G C  G  ++   L+ E    G   N+ 
Sbjct: 512 NEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIH 571

Query: 265 TFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSM 324
           T+ +M++  CK  +I +   L   ++ + +  +   YN ++  +C  G +  A ++  +M
Sbjct: 572 TYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENM 631

Query: 325 HSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQA 384
            SKG      +Y+ LI+G C I  VE+A  L  ++   G    V+ Y  L+ G  + GQ 
Sbjct: 632 KSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQM 691

Query: 385 GYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCL 444
             A+  + EM  +N+ P+  TY ++IDG CK   +++A  L   ++ +     +  +N L
Sbjct: 692 DTAESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVL 751

Query: 445 IDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHG 482
            +G CKA  +DNA+++  ++  +GL    +TY+ ++HG
Sbjct: 752 TNGFCKANDMDNAFKVCDQMATEGLPVDEITYTTLVHG 789



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 87/278 (31%), Positives = 139/278 (50%), Gaps = 13/278 (4%)

Query: 66  MTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKER 125
           MT     P I ++N L   +      D  I  + +  + GL+ +  T  I++        
Sbjct: 526 MTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMM-------E 578

Query: 126 GLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYEN 185
           G C  NRI++   LF  +++  +  + I Y  +I   C+ GN++ AL+L + M S     
Sbjct: 579 GYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKS----K 634

Query: 186 GLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWE 245
           G++   N  +YS +I  +C  GLV+ AK L  EM+  G  P VV  T LI G+C  G  +
Sbjct: 635 GILP--NCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMD 692

Query: 246 EVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLM 305
                ++EM+     PN  T+ VMID  CK G + +AN LL  M + G+ PD  TYN L 
Sbjct: 693 TAESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVLT 752

Query: 306 DGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGY 343
           +G+C    +D A ++   M ++G     ++Y  L++G+
Sbjct: 753 NGFCKANDMDNAFKVCDQMATEGLPVDEITYTTLVHGW 790



 Score =  108 bits (270), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 75/280 (26%), Positives = 133/280 (47%), Gaps = 3/280 (1%)

Query: 288 LMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKIL 347
           L+ ++G  P   T N  +         +   E+F  M    C   V S+  +IN  CK  
Sbjct: 176 LLARKGTFPSLKTCNFXLSSLVKANEFEKCCEVFRVMSEGACP-DVFSFTNVINALCKGG 234

Query: 348 NVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYN 407
            +E A+ L+ ++   G+   V+TYN +++GL Q G+   A +L ++M +  V+P+L TY 
Sbjct: 235 KMENAIELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQPNLKTYG 294

Query: 408 ILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQK 467
            LI+GL K N   +   +   +    F   + +FN LIDG CK G ++ A ++   +  K
Sbjct: 295 ALINGLIKLNFFDKVNHILDEMIGAGFNPNVVVFNNLIDGYCKMGNIEGALKIKDVMISK 354

Query: 468 GLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKV 527
            + PT VT   ++ G C+  ++E A + L  +  +G + +     +++H   +  +    
Sbjct: 355 NITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDNCYSVVHWLCKKFRYHSA 414

Query: 528 VELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAV 567
                 M    RN  P D   +++V  L KD K+ E + +
Sbjct: 415 FRFTKMMLS--RNFRPSDLLLTMLVCGLCKDGKHLEATEL 452


>gi|449432854|ref|XP_004134213.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Cucumis sativus]
          Length = 904

 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 152/537 (28%), Positives = 247/537 (45%), Gaps = 41/537 (7%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CK+    LNEA   F +M   +  P   ++N +         ++   S   +    G +P
Sbjct: 316 CKAD--RLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIP 373

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
             ++ N +++C G K        ++ EA   F+ M    + P++ TY  +I+  C+ G L
Sbjct: 374 SVVSYNCILSCLGRK-------GQVDEALKKFEEMKKDAI-PNLSTYNIMIDMLCKAGKL 425

Query: 169 SVALRLHKKMV-SGDYEN-------------------------GLISKT---NIFSYSII 199
             AL +   M  +G + N                         GL  KT   +  +Y  +
Sbjct: 426 ETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSL 485

Query: 200 IDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGP 259
           I+ L + G VD+A +L+ +M      P  VV T+LI  F   G  E+ + ++ EML LG 
Sbjct: 486 IEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGC 545

Query: 260 RPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTARE 319
            P+LL  N  +DC+ K G+I +   L + +   G  PD  +Y  L+ G    G    A E
Sbjct: 546 SPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYE 605

Query: 320 IFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLF 379
           +F +M  +GC     +YN +I+G+CK   V +A  L  ++ + G   TV+TY +++ GL 
Sbjct: 606 LFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLA 665

Query: 380 QAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIE 439
           +  +   A  LF+E K   +E ++  Y+ LIDG  K   + EA  +   L        + 
Sbjct: 666 KIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVY 725

Query: 440 IFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYM 499
            +NCL+D L KA  +  A   F  +      P  +TYSI+IHGLC+  K  KA  F   M
Sbjct: 726 TWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEM 785

Query: 500 EKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLA 556
           +K G  PNV T+ T++ G  +     +   L  K    E+  V D   ++ +++ L+
Sbjct: 786 QKQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKF--KEKGGVADSAIYNAIIEGLS 840



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 150/532 (28%), Positives = 253/532 (47%), Gaps = 41/532 (7%)

Query: 62  FFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFG 121
            F  M  +  +  +  F  L    A+    DA +S   ++ S  L PD +  N+ I+CFG
Sbjct: 222 LFQQMQELGYAVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLEPDVVLYNVCIDCFG 281

Query: 122 NKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKM--- 178
                     ++  A   F  M A G+  D +TY ++I   C+   L+ A+ L + M   
Sbjct: 282 KA-------GKVDMAWKFFHEMKANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQN 334

Query: 179 -----------------VSGDYENG--LISKT-------NIFSYSIIIDSLCKEGLVDKA 212
                            ++G +E+   L+ +        ++ SY+ I+  L ++G VD+A
Sbjct: 335 KQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEA 394

Query: 213 KELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDC 272
            + F EMK   I P +     +I   C AG  E    +   M D G  PN++T N+M+D 
Sbjct: 395 LKKFEEMKKDAI-PNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDR 453

Query: 273 LCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHT 332
           LCK  ++++A  + E +  +   PD  TY SL++G    GR+D A +++  M        
Sbjct: 454 LCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPN 513

Query: 333 VVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFD 392
            V Y  LI  + K    E+   +Y +++  G    ++  NT +  +F+AG+    + LF 
Sbjct: 514 AVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQ 573

Query: 393 EMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAG 452
           E+K     PD  +Y ILI GL K     EA +LF+ ++          +N +IDG CK+G
Sbjct: 574 EIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSG 633

Query: 453 RLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFN 512
           +++ A++L  ++  KG  PTVVTY  +I GL +  +L++A       +  G   NVV ++
Sbjct: 634 KVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYS 693

Query: 513 TLMHGFLQNNKTSKVVELLHKMAE-PERNLVPDDTTFSIVVDLLAKDEKYHE 563
           +L+ GF    K  ++ E    M E  ++ L P+  T++ ++D L K E+  E
Sbjct: 694 SLIDGF---GKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISE 742



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 126/462 (27%), Positives = 238/462 (51%), Gaps = 15/462 (3%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
           P +S++N++   + K    +  +     +   GL P+ +T+NI+++        LC   R
Sbjct: 407 PNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVD-------RLCKAQR 459

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
           + +A  +F+ +     RPD +TY +LI G  R G +  A +L+++M+  +         N
Sbjct: 460 LDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDAN------QIPN 513

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
              Y+ +I +  K G  +   +++ EM   G +P +++  T +     AG  E+   LF 
Sbjct: 514 AVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQ 573

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
           E+ +LG  P+  ++ ++I  L K G  +EA  L   M ++G   D   YN+++DG+C  G
Sbjct: 574 EIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSG 633

Query: 313 RIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYN 372
           +++ A ++   M +KG + TVV+Y  +I+G  KI  ++EA  L+ +  S G+   V+ Y+
Sbjct: 634 KVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYS 693

Query: 373 TLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMN 432
           +L+ G  + G+   A  + +E+    + P++ T+N L+D L K   + EA+  F  ++  
Sbjct: 694 SLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDL 753

Query: 433 KFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKA 492
           K       ++ LI GLCK  + + A+  + ++ ++G  P V TY+ MI GL + G + +A
Sbjct: 754 KCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEA 813

Query: 493 ND-FLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHK 533
           +  F  + EK G A + + +N ++ G    N+ S    L  +
Sbjct: 814 DTLFEKFKEKGGVADSAI-YNAIIEGLSNANRASDAYRLFEE 854



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 130/513 (25%), Positives = 237/513 (46%), Gaps = 23/513 (4%)

Query: 55  NLNEARYFFGYMTHMQPSPPI-SSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLT- 112
           ++N A  +F +   +        ++N L   +A+ R ++ +     ++   G  P   T 
Sbjct: 109 DVNNAVNYFRWAERLTDRAHCREAYNSLLMVMARTRKFNCLEQILEEMSIAGFGPSNNTC 168

Query: 113 LNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVAL 172
           + I+++   ++        +++EA    + M     RP    Y  LI     + +    L
Sbjct: 169 IEIVLSFIKSR--------KLREAFTFIQTMRKLKFRPAFSAYTNLIGALSTSRDSDCML 220

Query: 173 RLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCT 232
            L ++M    Y        N+  ++ +I    +EG VD A  L  EMK   + P VV+  
Sbjct: 221 TLFQQMQELGY------AVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLEPDVVLYN 274

Query: 233 TLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQR 292
             I  F  AG  +     F EM   G   + +T+  MI  LCK  ++NEA  L E M Q 
Sbjct: 275 VCIDCFGKAGKVDMAWKFFHEMKANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQN 334

Query: 293 GLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEA 352
              P  + YN+++ GY + G+ + A  +      KGC  +VVSYN +++   +   V+EA
Sbjct: 335 KQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEA 394

Query: 353 MSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDG 412
           +  + ++  + +   + TYN ++  L +AG+   A  + D MK   + P++ T NI++D 
Sbjct: 395 LKKFEEMKKDAI-PNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDR 453

Query: 413 LCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPT 472
           LCK   + +A  +F  L+          +  LI+GL + GR+D A++L+ ++     +P 
Sbjct: 454 LCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPN 513

Query: 473 VVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLH 532
            V Y+ +I    + G+ E  +     M + GC+P+++  NT M    +  +  K   L  
Sbjct: 514 AVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQ 573

Query: 533 KMAEPERNL--VPDDTTFSIVVDLLAKDEKYHE 563
           ++    +NL  +PD  +++I++  L K    HE
Sbjct: 574 EI----KNLGFIPDARSYTILIHGLVKAGFAHE 602



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 111/360 (30%), Positives = 175/360 (48%), Gaps = 13/360 (3%)

Query: 98  YRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGT 157
           Y +++ +G  PD L LN  ++C             I++   LF+ +   G  PD  +Y  
Sbjct: 537 YNEMLRLGCSPDLLLLNTYMDCVFKA-------GEIEKGRALFQEIKNLGFIPDARSYTI 589

Query: 158 LINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFL 217
           LI+G  + G    A  L   M     E G +  T   +Y+ +ID  CK G V+KA +L  
Sbjct: 590 LIHGLVKAGFAHEAYELFYTM----KEQGCVLDTR--AYNTVIDGFCKSGKVNKAYQLLE 643

Query: 218 EMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGG 277
           EMK +G  P VV   ++I G       +E   LF E    G   N++ ++ +ID   K G
Sbjct: 644 EMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVG 703

Query: 278 KINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYN 337
           +I+EA  ++E ++Q+GL P+ +T+N L+D       I  A   F SM    C    ++Y+
Sbjct: 704 RIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYS 763

Query: 338 ILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLY 397
           ILI+G CKI    +A   ++++   G +  V TY T++SGL +AG    A  LF++ K  
Sbjct: 764 ILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFKEK 823

Query: 398 NVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNA 457
               D + YN +I+GL   N   +A +LF    +       +    L+D L KA  ++ A
Sbjct: 824 GGVADSAIYNAIIEGLSNANRASDAYRLFEEARLKGCSIYTKTCVVLLDSLHKAECIEQA 883



 Score =  122 bits (305), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 85/316 (26%), Positives = 143/316 (45%), Gaps = 3/316 (0%)

Query: 265 TFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSM 324
            +N ++  + +  K N    +LE M   G  P   T   ++  +    ++  A     +M
Sbjct: 132 AYNSLLMVMARTRKFNCLEQILEEMSIAGFGPSNNTCIEIVLSFIKSRKLREAFTFIQTM 191

Query: 325 HSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQA 384
                +    +Y  LI       + +  ++L++Q+   G    V  + TL+    + G+ 
Sbjct: 192 RKLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGRV 251

Query: 385 GYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCL 444
             A  L DEMK  ++EPD+  YN+ ID   K   V  A K FH ++ N        +  +
Sbjct: 252 DAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKFFHEMKANGLVLDDVTYTSM 311

Query: 445 IDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGC 504
           I  LCKA RL+ A ELF  + Q   VP    Y+ MI G    GK E A   L    + GC
Sbjct: 312 IGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGC 371

Query: 505 APNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHEC 564
            P+VV++N ++       +  +V E L K  E +++ +P+ +T++I++D+L K  K    
Sbjct: 372 IPSVVSYNCILSCL---GRKGQVDEALKKFEEMKKDAIPNLSTYNIMIDMLCKAGKLETA 428

Query: 565 SAVSKSSYRACLYVTI 580
             V  +   A L+  +
Sbjct: 429 LVVRDAMKDAGLFPNV 444


>gi|357494939|ref|XP_003617758.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355519093|gb|AET00717.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 906

 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 137/502 (27%), Positives = 248/502 (49%), Gaps = 16/502 (3%)

Query: 56  LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNI 115
           L+EA   F  +   +  P + ++N +         +D   S   +    G +P  +  N 
Sbjct: 324 LDEAVELFEELDLNRSVPCVYAYNTMIMGYGSAGKFDEAYSLLERQKRKGCIPSVIAYNC 383

Query: 116 LINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLH 175
           ++ C G K        +++EA  +   M      P++ TY  LI+  C+ G L  AL++ 
Sbjct: 384 ILTCLGRK-------GKVEEALRIHDEMRQ-DAAPNLTTYNILIDMLCKAGELEAALKVQ 435

Query: 176 KKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLI 235
             M     E GL    NI + +I+ID LCK   +D+A  +FL +  +  +P      +LI
Sbjct: 436 DTM----KEAGLFP--NIMTVNIMIDRLCKAQKLDEACSIFLGLDHKVCSPDSRTFCSLI 489

Query: 236 HGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLN 295
            G    G  ++   L+ +MLD    PN++ +  +I    K G+  + + + + M+ RG +
Sbjct: 490 DGLGRRGRVDDAYSLYEKMLDSDQIPNVVVYTSLIQNFFKCGRKEDGHKIYKEMVHRGCS 549

Query: 296 PDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSL 355
           PD    NS MD     G ++  R +F  + ++G    V SY+ILI+G  K     E   L
Sbjct: 550 PDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQGLVPDVRSYSILIHGLVKAGFSRETYKL 609

Query: 356 YRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCK 415
           + ++   G+   V+ YNT++ G  ++G+   A +L +EMK   ++P + TY  ++DGL K
Sbjct: 610 FYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKTKGLQPTVVTYGSVVDGLAK 669

Query: 416 NNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVT 475
            + + EA  LF   +    +  + I++ LIDG  K GR+D A+ +  +L QKGL P   T
Sbjct: 670 IDRLDEAYMLFEEAKSIGVDLNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNSYT 729

Query: 476 YSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMA 535
           ++ ++  L +  ++++A      M+   C+PN +T++ +++G     K +K      +M 
Sbjct: 730 WNCLLDALVKAEEIDEAQVCFQNMKNLKCSPNAMTYSIMINGLCMIRKFNKAFVFWQEM- 788

Query: 536 EPERNLVPDDTTFSIVVDLLAK 557
             ++ L P++ T++ ++  LAK
Sbjct: 789 -QKQGLKPNNITYTTMIAGLAK 809



 Score =  218 bits (556), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 148/535 (27%), Positives = 259/535 (48%), Gaps = 43/535 (8%)

Query: 62  FFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFG 121
            F  M  +     +  F  L    A+    DA +S   ++ S     D +  N+ I+CFG
Sbjct: 225 LFHQMQEIGYEANVHLFTTLVRVFAREGRIDAALSLLDEMKSNSFTADLVLYNVCIDCFG 284

Query: 122 NKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKK---- 177
                     ++  A   F  M A G+ PD +TY TLI   C+   L  A+ L ++    
Sbjct: 285 KV-------GKVDMAWKFFHEMKAQGLVPDDVTYTTLIGVLCKARRLDEAVELFEELDLN 337

Query: 178 -----------MVSG-------DYENGLISKT-------NIFSYSIIIDSLCKEGLVDKA 212
                      M+ G       D    L+ +        ++ +Y+ I+  L ++G V++A
Sbjct: 338 RSVPCVYAYNTMIMGYGSAGKFDEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEA 397

Query: 213 KELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDC 272
             +  EM+ +   P +     LI   C AG  E    +   M + G  PN++T N+MID 
Sbjct: 398 LRIHDEMR-QDAAPNLTTYNILIDMLCKAGELEAALKVQDTMKEAGLFPNIMTVNIMIDR 456

Query: 273 LCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHT 332
           LCK  K++EA  +   +  +  +PD  T+ SL+DG    GR+D A  ++  M        
Sbjct: 457 LCKAQKLDEACSIFLGLDHKVCSPDSRTFCSLIDGLGRRGRVDDAYSLYEKMLDSDQIPN 516

Query: 333 VVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFD 392
           VV Y  LI  + K    E+   +Y++++  G    ++  N+ +  +F+AG+    + LF+
Sbjct: 517 VVVYTSLIQNFFKCGRKEDGHKIYKEMVHRGCSPDLMLLNSYMDCVFKAGEVEKGRALFE 576

Query: 393 EMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAG 452
           E+K   + PD+ +Y+ILI GL K    +E  KLF+ ++       +  +N +IDG CK+G
Sbjct: 577 EIKAQGLVPDVRSYSILIHGLVKAGFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSG 636

Query: 453 RLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKN--GCAPNVVT 510
           ++D A++L  ++  KGL PTVVTY  ++ GL +  +L++A  ++L+ E    G   NVV 
Sbjct: 637 KVDKAYQLLEEMKTKGLQPTVVTYGSVVDGLAKIDRLDEA--YMLFEEAKSIGVDLNVVI 694

Query: 511 FNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECS 565
           +++L+ GF +  +  +   +L ++   ++ L P+  T++ ++D L K E+  E  
Sbjct: 695 YSSLIDGFGKVGRIDEAYLILEELM--QKGLTPNSYTWNCLLDALVKAEEIDEAQ 747



 Score =  204 bits (520), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 122/453 (26%), Positives = 231/453 (50%), Gaps = 13/453 (2%)

Query: 72  SPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVEN 131
           +P ++++N+L   + K    +A +     +   GL P+ +T+NI+I+        LC   
Sbjct: 409 APNLTTYNILIDMLCKAGELEAALKVQDTMKEAGLFPNIMTVNIMID-------RLCKAQ 461

Query: 132 RIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKT 191
           ++ EA  +F  +      PD  T+ +LI+G  R G +  A  L++KM+  D         
Sbjct: 462 KLDEACSIFLGLDHKVCSPDSRTFCSLIDGLGRRGRVDDAYSLYEKMLDSD------QIP 515

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
           N+  Y+ +I +  K G  +   +++ EM  RG +P +++  + +     AG  E+   LF
Sbjct: 516 NVVVYTSLIQNFFKCGRKEDGHKIYKEMVHRGCSPDLMLLNSYMDCVFKAGEVEKGRALF 575

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
            E+   G  P++ +++++I  L K G   E   L   M ++GL+ D   YN+++DG+C  
Sbjct: 576 EEIKAQGLVPDVRSYSILIHGLVKAGFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFCKS 635

Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
           G++D A ++   M +KG + TVV+Y  +++G  KI  ++EA  L+ +  S GV   V+ Y
Sbjct: 636 GKVDKAYQLLEEMKTKGLQPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSIGVDLNVVIY 695

Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
           ++L+ G  + G+   A  + +E+    + P+  T+N L+D L K   + EA   F  ++ 
Sbjct: 696 SSLIDGFGKVGRIDEAYLILEELMQKGLTPNSYTWNCLLDALVKAEEIDEAQVCFQNMKN 755

Query: 432 NKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEK 491
            K       ++ +I+GLC   + + A+  + ++ ++GL P  +TY+ MI GL + G + +
Sbjct: 756 LKCSPNAMTYSIMINGLCMIRKFNKAFVFWQEMQKQGLKPNNITYTTMIAGLAKAGNVME 815

Query: 492 ANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKT 524
           A       + +G  P+   +N ++ G    NK 
Sbjct: 816 ARGLFDRFKASGGVPDSACYNAMIEGLSSANKA 848



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 129/437 (29%), Positives = 207/437 (47%), Gaps = 36/437 (8%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CK+    L+EA   F  + H   SP   +F  L   + +    D   S Y K++    +P
Sbjct: 458 CKAQ--KLDEACSIFLGLDHKVCSPDSRTFCSLIDGLGRRGRVDDAYSLYEKMLDSDQIP 515

Query: 109 DFLTLNILINCF---GNKERGL-----------------------CV--ENRIKEATWLF 140
           + +    LI  F   G KE G                        CV     +++   LF
Sbjct: 516 NVVVYTSLIQNFFKCGRKEDGHKIYKEMVHRGCSPDLMLLNSYMDCVFKAGEVEKGRALF 575

Query: 141 KNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIII 200
           + + A G+ PDV +Y  LI+G  + G      +L  +M     E GL    ++ +Y+ +I
Sbjct: 576 EEIKAQGLVPDVRSYSILIHGLVKAGFSRETYKLFYEM----KEQGL--HLDVLAYNTVI 629

Query: 201 DSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPR 260
           D  CK G VDKA +L  EMK +G+ P VV   +++ G       +E   LF E   +G  
Sbjct: 630 DGFCKSGKVDKAYQLLEEMKTKGLQPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSIGVD 689

Query: 261 PNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREI 320
            N++ ++ +ID   K G+I+EA  +LE ++Q+GL P+ +T+N L+D       ID A+  
Sbjct: 690 LNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNSYTWNCLLDALVKAEEIDEAQVC 749

Query: 321 FLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQ 380
           F +M +  C    ++Y+I+ING C I    +A   ++++   G++   ITY T+++GL +
Sbjct: 750 FQNMKNLKCSPNAMTYSIMINGLCMIRKFNKAFVFWQEMQKQGLKPNNITYTTMIAGLAK 809

Query: 381 AGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEI 440
           AG    A+ LFD  K     PD + YN +I+GL   N   +A  +F    +       + 
Sbjct: 810 AGNVMEARGLFDRFKASGGVPDSACYNAMIEGLSSANKAMDAYIVFEETRLKGCRVNSKT 869

Query: 441 FNCLIDGLCKAGRLDNA 457
              L+D L KA  L+ A
Sbjct: 870 CVVLLDALHKADCLEQA 886



 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 121/427 (28%), Positives = 201/427 (47%), Gaps = 9/427 (2%)

Query: 131 NRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISK 190
           +++KEA  + + M  F  RP    Y TLI            L L  +M    YE      
Sbjct: 182 HKLKEAFGVIEMMRKFKFRPAFSAYTTLIGALSAANRPDPMLTLFHQMQEIGYE------ 235

Query: 191 TNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGL 250
            N+  ++ ++    +EG +D A  L  EMK       +V+    I  F   G  +     
Sbjct: 236 ANVHLFTTLVRVFAREGRIDAALSLLDEMKSNSFTADLVLYNVCIDCFGKVGKVDMAWKF 295

Query: 251 FIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCL 310
           F EM   G  P+ +T+  +I  LCK  +++EA  L E +      P  + YN+++ GY  
Sbjct: 296 FHEMKAQGLVPDDVTYTTLIGVLCKARRLDEAVELFEELDLNRSVPCVYAYNTMIMGYGS 355

Query: 311 VGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVIT 370
            G+ D A  +      KGC  +V++YN ++    +   VEEA+ ++ ++  +     + T
Sbjct: 356 AGKFDEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRIHDEMRQDAA-PNLTT 414

Query: 371 YNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLE 430
           YN L+  L +AG+   A K+ D MK   + P++ T NI+ID LCK   + EA  +F  L+
Sbjct: 415 YNILIDMLCKAGELEAALKVQDTMKEAGLFPNIMTVNIMIDRLCKAQKLDEACSIFLGLD 474

Query: 431 MNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLE 490
                     F  LIDGL + GR+D+A+ L+ K+     +P VV Y+ +I    + G+ E
Sbjct: 475 HKVCSPDSRTFCSLIDGLGRRGRVDDAYSLYEKMLDSDQIPNVVVYTSLIQNFFKCGRKE 534

Query: 491 KANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSI 550
             +     M   GC+P+++  N+ M    +  +  K   L  ++    + LVPD  ++SI
Sbjct: 535 DGHKIYKEMVHRGCSPDLMLLNSYMDCVFKAGEVEKGRALFEEI--KAQGLVPDVRSYSI 592

Query: 551 VVDLLAK 557
           ++  L K
Sbjct: 593 LIHGLVK 599



 Score =  148 bits (374), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 105/403 (26%), Positives = 191/403 (47%), Gaps = 11/403 (2%)

Query: 150 PDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLV 209
           P+V  Y   +    RT NL    ++ ++M    +  GL +  ++     ++ S  K   +
Sbjct: 133 PEV--YNAFLMVMARTRNLDYLEQILEEMSVAGF--GLSNHVSV----ELVASFVKSHKL 184

Query: 210 DKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVM 269
            +A  +   M+     PA    TTLI     A   + +  LF +M ++G   N+  F  +
Sbjct: 185 KEAFGVIEMMRKFKFRPAFSAYTTLIGALSAANRPDPMLTLFHQMQEIGYEANVHLFTTL 244

Query: 270 IDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGC 329
           +    + G+I+ A  LL+ M       D   YN  +D +  VG++D A + F  M ++G 
Sbjct: 245 VRVFAREGRIDAALSLLDEMKSNSFTADLVLYNVCIDCFGKVGKVDMAWKFFHEMKAQGL 304

Query: 330 KHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQK 389
               V+Y  LI   CK   ++EA+ L+ ++  N     V  YNT++ G   AG+   A  
Sbjct: 305 VPDDVTYTTLIGVLCKARRLDEAVELFEELDLNRSVPCVYAYNTMIMGYGSAGKFDEAYS 364

Query: 390 LFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLC 449
           L +  K     P +  YN ++  L +   V+EA+++   +  +     +  +N LID LC
Sbjct: 365 LLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRIHDEMRQDAAP-NLTTYNILIDMLC 423

Query: 450 KAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVV 509
           KAG L+ A ++   + + GL P ++T +IMI  LC+  KL++A    L ++   C+P+  
Sbjct: 424 KAGELEAALKVQDTMKEAGLFPNIMTVNIMIDRLCKAQKLDEACSIFLGLDHKVCSPDSR 483

Query: 510 TFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVV 552
           TF +L+ G  +  +      L  KM + ++  +P+   ++ ++
Sbjct: 484 TFCSLIDGLGRRGRVDDAYSLYEKMLDSDQ--IPNVVVYTSLI 524



 Score =  135 bits (341), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 88/308 (28%), Positives = 151/308 (49%), Gaps = 4/308 (1%)

Query: 269 MIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKG 328
           ++    K  K+ EA G++E+M +    P    Y +L+       R D    +F  M   G
Sbjct: 174 LVASFVKSHKLKEAFGVIEMMRKFKFRPAFSAYTTLIGALSAANRPDPMLTLFHQMQEIG 233

Query: 329 CKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQ 388
            +  V  +  L+  + +   ++ A+SL  ++ SN     ++ YN  +    + G+   A 
Sbjct: 234 YEANVHLFTTLVRVFAREGRIDAALSLLDEMKSNSFTADLVLYNVCIDCFGKVGKVDMAW 293

Query: 389 KLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGL 448
           K F EMK   + PD  TY  LI  LCK   + EAV+LF  L++N+    +  +N +I G 
Sbjct: 294 KFFHEMKAQGLVPDDVTYTTLIGVLCKARRLDEAVELFEELDLNRSVPCVYAYNTMIMGY 353

Query: 449 CKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNV 508
             AG+ D A+ L  +  +KG +P+V+ Y+ ++  L RKGK+E+A      M ++  APN+
Sbjct: 354 GSAGKFDEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRIHDEMRQDA-APNL 412

Query: 509 VTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE-CSAV 567
            T+N L+    +  +    +++   M E    L P+  T +I++D L K +K  E CS  
Sbjct: 413 TTYNILIDMLCKAGELEAALKVQDTMKEA--GLFPNIMTVNIMIDRLCKAQKLDEACSIF 470

Query: 568 SKSSYRAC 575
               ++ C
Sbjct: 471 LGLDHKVC 478


>gi|224130398|ref|XP_002320827.1| predicted protein [Populus trichocarpa]
 gi|222861600|gb|EEE99142.1| predicted protein [Populus trichocarpa]
          Length = 775

 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 152/501 (30%), Positives = 240/501 (47%), Gaps = 26/501 (5%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCF--GNKERGLCVE 130
           P  ++ ++LF  + K    + ++S   +   + L+  F    +LI+ F  G     LC  
Sbjct: 227 PNDATGDILFSFLLKRERNEELLS---EDEIVNLVLKFGEHGVLISSFWMGRLITRLC-R 282

Query: 131 NRIKEATW-LFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLIS 189
           NR     W LF  MI  G   +     +L+ G  R GN +    L +KMV  D +     
Sbjct: 283 NRKTNRGWDLFTEMIKLGAVLESAACNSLLTGLAREGNFNRMNELMEKMVEMDIQ----- 337

Query: 190 KTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGR--------GINPAVVVCTTLIHGFCCA 241
             N+ ++ I+I+ +CK   VD A E+  +M G          + P VV+  TLI G C  
Sbjct: 338 -PNVVTFGILINHMCKFRRVDDALEVLEKMSGGKESGGISVSVEPDVVIYNTLIDGLCKV 396

Query: 242 GNWEEVNGLFIEMLDL-GPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFT 300
           G  +E  GL   M    G  P+ +T+N +ID  CK G+I +   L + M + G+ P+  T
Sbjct: 397 GRQQEGLGLMERMRSQKGCAPDTITYNCLIDGFCKAGEIEKGKELFDEMNKEGVAPNVVT 456

Query: 301 YNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQII 360
            N+L+ G C  GR+ +A   F+    +G K   V+Y  LIN +C + N E+AM L+ +++
Sbjct: 457 VNTLVGGMCRTGRVSSAVNFFVEAQRRGMKGDAVTYTALINAFCNVNNFEKAMELFNEML 516

Query: 361 SNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQ 420
            +G     I Y TL+SG  QAG+   A  +  E+K   + PD   YN LI G C+ N   
Sbjct: 517 KSGCSPDAIVYYTLISGFSQAGRMADASFVLAELKKLGIRPDTVCYNTLIGGFCRTNKFH 576

Query: 421 EAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMI 480
              ++   +E    +     +N LI    K G L  A ++  K+ + G+VPTV TY  +I
Sbjct: 577 RVFEMLKEMEEAGLKPDTITYNTLIAYASKNGDLKFAQKVMRKMIKAGVVPTVATYGAVI 636

Query: 481 HGLCRKGKLEKANDFLLYME-KNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPER 539
           +  C  G   +A +    M+  +   PN V +N L++   +NNK    V L+  M     
Sbjct: 637 NAYCLNGNGNEAMEIFKDMKAASKVPPNTVIYNILINSLCKNNKVKSAVSLMEDM--KIW 694

Query: 540 NLVPDDTTFSIVVDLLAKDEK 560
            + P+ TT++ +   L +DEK
Sbjct: 695 GVTPNTTTYNAIFKGL-RDEK 714



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 129/445 (28%), Positives = 215/445 (48%), Gaps = 21/445 (4%)

Query: 79  NLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATW 138
           N L   +A+  +++ +     K+V + + P+ +T  ILIN        +C   R+ +A  
Sbjct: 309 NSLLTGLAREGNFNRMNELMEKMVEMDIQPNVVTFGILIN-------HMCKFRRVDDALE 361

Query: 139 LFKNM--------IAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISK 190
           + + M        I+  V PDV+ Y TLI+G C+ G     L L ++M S   + G    
Sbjct: 362 VLEKMSGGKESGGISVSVEPDVVIYNTLIDGLCKVGRQQEGLGLMERMRS---QKGCAPD 418

Query: 191 TNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGL 250
           T   +Y+ +ID  CK G ++K KELF EM   G+ P VV   TL+ G C  G        
Sbjct: 419 T--ITYNCLIDGFCKAGEIEKGKELFDEMNKEGVAPNVVTVNTLVGGMCRTGRVSSAVNF 476

Query: 251 FIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCL 310
           F+E    G + + +T+  +I+  C      +A  L   M++ G +PD   Y +L+ G+  
Sbjct: 477 FVEAQRRGMKGDAVTYTALINAFCNVNNFEKAMELFNEMLKSGCSPDAIVYYTLISGFSQ 536

Query: 311 VGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVIT 370
            GR+  A  +   +   G +   V YN LI G+C+         + +++   G++   IT
Sbjct: 537 AGRMADASFVLAELKKLGIRPDTVCYNTLIGGFCRTNKFHRVFEMLKEMEEAGLKPDTIT 596

Query: 371 YNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFH-ML 429
           YNTL++   + G   +AQK+  +M    V P ++TY  +I+  C N    EA+++F  M 
Sbjct: 597 YNTLIAYASKNGDLKFAQKVMRKMIKAGVVPTVATYGAVINAYCLNGNGNEAMEIFKDMK 656

Query: 430 EMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKL 489
             +K      I+N LI+ LCK  ++ +A  L   +   G+ P   TY+ +  GL  +  L
Sbjct: 657 AASKVPPNTVIYNILINSLCKNNKVKSAVSLMEDMKIWGVTPNTTTYNAIFKGLRDEKDL 716

Query: 490 EKANDFLLYMEKNGCAPNVVTFNTL 514
           EK  +F+  M ++ C P+ +T   L
Sbjct: 717 EKVFEFMDRMIEHACNPDYITMEIL 741



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 126/452 (27%), Positives = 209/452 (46%), Gaps = 23/452 (5%)

Query: 55  NLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL--------VSIGL 106
           N N        M  M   P + +F +L   + K R  D  +    K+        +S+ +
Sbjct: 320 NFNRMNELMEKMVEMDIQPNVVTFGILINHMCKFRRVDDALEVLEKMSGGKESGGISVSV 379

Query: 107 LPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAF-GVRPDVITYGTLINGFCRT 165
            PD +  N LI+       GLC   R +E   L + M +  G  PD ITY  LI+GFC+ 
Sbjct: 380 EPDVVIYNTLID-------GLCKVGRQQEGLGLMERMRSQKGCAPDTITYNCLIDGFCKA 432

Query: 166 GNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGIN 225
           G +     L  +M      N      N+ + + ++  +C+ G V  A   F+E + RG+ 
Sbjct: 433 GEIEKGKELFDEM------NKEGVAPNVVTVNTLVGGMCRTGRVSSAVNFFVEAQRRGMK 486

Query: 226 PAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGL 285
              V  T LI+ FC   N+E+   LF EML  G  P+ + +  +I    + G++ +A+ +
Sbjct: 487 GDAVTYTALINAFCNVNNFEKAMELFNEMLKSGCSPDAIVYYTLISGFSQAGRMADASFV 546

Query: 286 LELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCK 345
           L  + + G+ PD   YN+L+ G+C   +     E+   M   G K   ++YN LI    K
Sbjct: 547 LAELKKLGIRPDTVCYNTLIGGFCRTNKFHRVFEMLKEMEEAGLKPDTITYNTLIAYASK 606

Query: 346 ILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYN-VEPDLS 404
             +++ A  + R++I  GV  TV TY  +++     G    A ++F +MK  + V P+  
Sbjct: 607 NGDLKFAQKVMRKMIKAGVVPTVATYGAVINAYCLNGNGNEAMEIFKDMKAASKVPPNTV 666

Query: 405 TYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKL 464
            YNILI+ LCKNN V+ AV L   +++         +N +  GL     L+  +E   ++
Sbjct: 667 IYNILINSLCKNNKVKSAVSLMEDMKIWGVTPNTTTYNAIFKGLRDEKDLEKVFEFMDRM 726

Query: 465 PQKGLVPTVVTYSIMIHGLCRKGKLEKANDFL 496
            +    P  +T  I+   L   G++E+   F+
Sbjct: 727 IEHACNPDYITMEILTEWLSAVGEIERLKKFV 758


>gi|242079087|ref|XP_002444312.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
 gi|241940662|gb|EES13807.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
          Length = 695

 Score =  219 bits (558), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 139/524 (26%), Positives = 256/524 (48%), Gaps = 40/524 (7%)

Query: 71  PSPPISSFNLLFGA-VAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINC---------- 119
           P P +SS NLL  + ++  RH D V + +  LV+ G  PD    N  +            
Sbjct: 119 PLPSLSSCNLLLESLLSVGRHAD-VRAAFGLLVAAGARPDTFAWNKAVQACVAAGDLDEA 177

Query: 120 ------FGNKE--------------RGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLI 159
                  G  E               GL    +  +A  +F  M+  GV P+ ITY T+I
Sbjct: 178 LAMLRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDRGVAPNQITYNTMI 237

Query: 160 NGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEM 219
           +G  + G+L    RL  +M+    ++G   K N+ +Y++++  LC+ G +D+ + L  EM
Sbjct: 238 DGHVKGGDLEAGFRLRDQML----QDG--RKPNVVTYNVLLSGLCRAGRMDETRALMDEM 291

Query: 220 KGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKI 279
               + P     + L  G    G+   +  LF E L  G      T +++++ LCK GK+
Sbjct: 292 TSYSMLPDGFTYSILFDGLTRTGDSRTMLSLFGESLKKGVIIGAYTCSILLNGLCKDGKV 351

Query: 280 NEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNIL 339
            +A  +LE+++  GL P    YN+L++GYC V  +  A  IF  M S+  +   ++YN L
Sbjct: 352 AKAEQVLEMLVHTGLVPTTAIYNTLINGYCQVRDLQGAFSIFEQMKSRHIRPDHITYNAL 411

Query: 340 INGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNV 399
           ING CK+  + EA  L  ++  +GV  +V T+NTL+    +AGQ      +  +M+   +
Sbjct: 412 INGLCKMEMITEAEDLVMEMEKSGVDPSVETFNTLIDAYGRAGQLEKCFTVLSDMQDKGI 471

Query: 400 EPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWE 459
           + ++ ++  ++   CKN  + EAV +   +         +++N +ID   ++G  + A+ 
Sbjct: 472 KSNVISFGSVVKAFCKNGKIPEAVAILDDMIHKDVVPNAQVYNSIIDAYIESGGTEQAFL 531

Query: 460 LFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFL 519
           L  K+   G+  ++ TY++++ GLC+  ++++A + +  +   G  P+VV++NT++    
Sbjct: 532 LVEKMKSSGVSASIFTYNLLLKGLCKNSQIDEAEELIYNLTNQGLRPDVVSYNTIISACC 591

Query: 520 QNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
               T + +ELL +M   + ++ P   T+  ++  L    + H+
Sbjct: 592 NKGDTDRALELLQEMH--KYDIRPTLRTYHPLLSALGSAGRVHD 633



 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 130/490 (26%), Positives = 233/490 (47%), Gaps = 21/490 (4%)

Query: 57  NEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNIL 116
           ++A   F  M     +P   ++N +     K    +A      +++  G  P+ +T N+L
Sbjct: 212 SDALKVFDEMVDRGVAPNQITYNTMIDGHVKGGDLEAGFRLRDQMLQDGRKPNVVTYNVL 271

Query: 117 INCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHK 176
           ++       GLC   R+ E   L   M ++ + PD  TY  L +G  RTG+    L L  
Sbjct: 272 LS-------GLCRAGRMDETRALMDEMTSYSMLPDGFTYSILFDGLTRTGDSRTMLSLFG 324

Query: 177 KMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIH 236
           + +    + G+I     ++ SI+++ LCK+G V KA+++   +   G+ P   +  TLI+
Sbjct: 325 ESL----KKGVI--IGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTAIYNTLIN 378

Query: 237 GFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNP 296
           G+C   + +    +F +M     RP+ +T+N +I+ LCK   I EA  L+  M + G++P
Sbjct: 379 GYCQVRDLQGAFSIFEQMKSRHIRPDHITYNALINGLCKMEMITEAEDLVMEMEKSGVDP 438

Query: 297 DRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLY 356
              T+N+L+D Y   G+++    +   M  KG K  V+S+  ++  +CK   + EA+++ 
Sbjct: 439 SVETFNTLIDAYGRAGQLEKCFTVLSDMQDKGIKSNVISFGSVVKAFCKNGKIPEAVAIL 498

Query: 357 RQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKN 416
             +I   V      YN+++    ++G    A  L ++MK   V   + TYN+L+ GLCKN
Sbjct: 499 DDMIHKDVVPNAQVYNSIIDAYIESGGTEQAFLLVEKMKSSGVSASIFTYNLLLKGLCKN 558

Query: 417 NCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTY 476
           + + EA +L + L        +  +N +I   C  G  D A EL  ++ +  + PT+ TY
Sbjct: 559 SQIDEAEELIYNLTNQGLRPDVVSYNTIISACCNKGDTDRALELLQEMHKYDIRPTLRTY 618

Query: 477 SIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAE 536
             ++  L   G++        +M      P+   + T      +    SKV  L  +M+ 
Sbjct: 619 HPLLSALGSAGRVHDMECLYQHMVHKNVEPSSSIYGT------RCENESKVASLKKEMS- 671

Query: 537 PERNLVPDDT 546
            E+ +  DDT
Sbjct: 672 -EKGIAFDDT 680



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 111/392 (28%), Positives = 202/392 (51%), Gaps = 16/392 (4%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
           N  L   C++G   ++E R     MT     P   ++++LF  + +      ++S + + 
Sbjct: 269 NVLLSGLCRAG--RMDETRALMDEMTSYSMLPDGFTYSILFDGLTRTGDSRTMLSLFGES 326

Query: 102 VSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLING 161
           +  G++    T +IL+N       GLC + ++ +A  + + ++  G+ P    Y TLING
Sbjct: 327 LKKGVIIGAYTCSILLN-------GLCKDGKVAKAEQVLEMLVHTGLVPTTAIYNTLING 379

Query: 162 FCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKG 221
           +C+  +L  A  + ++M S         + +  +Y+ +I+ LCK  ++ +A++L +EM+ 
Sbjct: 380 YCQVRDLQGAFSIFEQMKSRHI------RPDHITYNALINGLCKMEMITEAEDLVMEMEK 433

Query: 222 RGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINE 281
            G++P+V    TLI  +  AG  E+   +  +M D G + N+++F  ++   CK GKI E
Sbjct: 434 SGVDPSVETFNTLIDAYGRAGQLEKCFTVLSDMQDKGIKSNVISFGSVVKAFCKNGKIPE 493

Query: 282 ANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILIN 341
           A  +L+ MI + + P+   YNS++D Y   G  + A  +   M S G   ++ +YN+L+ 
Sbjct: 494 AVAILDDMIHKDVVPNAQVYNSIIDAYIESGGTEQAFLLVEKMKSSGVSASIFTYNLLLK 553

Query: 342 GYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEP 401
           G CK   ++EA  L   + + G+R  V++YNT++S     G    A +L  EM  Y++ P
Sbjct: 554 GLCKNSQIDEAEELIYNLTNQGLRPDVVSYNTIISACCNKGDTDRALELLQEMHKYDIRP 613

Query: 402 DLSTYNILIDGLCKNNCVQEAVKLF-HMLEMN 432
            L TY+ L+  L     V +   L+ HM+  N
Sbjct: 614 TLRTYHPLLSALGSAGRVHDMECLYQHMVHKN 645



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 40/169 (23%), Positives = 73/169 (43%), Gaps = 4/169 (2%)

Query: 401 PDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWEL 460
           P LS+ N+L++ L       +    F +L           +N  +     AG LD A  +
Sbjct: 121 PSLSSCNLLLESLLSVGRHADVRAAFGLLVAAGARPDTFAWNKAVQACVAAGDLDEALAM 180

Query: 461 FHKL--PQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGF 518
             ++   +    P   +Y+++I GL R GK   A      M   G APN +T+NT++ G 
Sbjct: 181 LRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDRGVAPNQITYNTMIDGH 240

Query: 519 LQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAV 567
           ++         L  +M +  R   P+  T+++++  L +  +  E  A+
Sbjct: 241 VKGGDLEAGFRLRDQMLQDGRK--PNVVTYNVLLSGLCRAGRMDETRAL 287


>gi|357475985|ref|XP_003608278.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|124359684|gb|ABD32353.2| Tetratricopeptide-like helical [Medicago truncatula]
 gi|355509333|gb|AES90475.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 870

 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 159/572 (27%), Positives = 267/572 (46%), Gaps = 85/572 (14%)

Query: 61  YFFGYMTHMQPSPPISSFNLLF---GAVAKNR-HYDAVISFYRKLVSIGLLPDFLTLNIL 116
           +F    TH  PS P+           ++ +NR HY  V S Y  ++  G+ P+  T N+L
Sbjct: 101 HFKSLRTHF-PSTPLPLQLYHLLLRSSLQQNRPHY--VTSLYTDMIQTGVNPETYTFNLL 157

Query: 117 INCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHK 176
           I       + LC  N +  A  LF  M   G +P+  T G L+ GFCR G    AL    
Sbjct: 158 I-------QSLCESNALDHARELFDKMSEKGCQPNKFTVGILVRGFCRAGRTKQALEFVD 210

Query: 177 KMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIH 236
             + G+         N   Y+ ++ S CK+ + D+A++L   M  +G+ P VV   + I 
Sbjct: 211 GKMGGN--------VNRVVYNTLVSSFCKQDMNDEAEKLVERMTEKGLLPDVVTFNSRIS 262

Query: 237 GFCCAGNWEEVNGLFIEML---DLG-PRPNLLTFNVMIDCLCKGGKINEANGLLELM--- 289
             C AG   E + +F +M    +LG P+PN++TFN+M+   C+ G + EA  L+E M   
Sbjct: 263 ALCRAGKVFEASRIFRDMQMDGELGLPKPNVVTFNLMLKGFCQEGMMEEARSLVETMKKG 322

Query: 290 --------------------------------IQRGLNPDRFTYNSLMDGYCLVGRIDTA 317
                                           ++ G+ P+ ++YN +MDG C    +  A
Sbjct: 323 GNFVSLESYNTWLLGLLRNGKLLEGRSVLDEMVENGIEPNIYSYNIVMDGLCRNHMMLDA 382

Query: 318 REIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSG 377
           R +   M S G     V+Y  L++GYC    V EA ++  ++I  G      T NTLL+ 
Sbjct: 383 RRLMDLMVSNGVYPDTVTYTTLLHGYCSKGKVFEAKAILNEMIRKGCHPNTYTCNTLLNS 442

Query: 378 LFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLF-HMLEMNKFEF 436
           L++ G+   A+++  +M   + + D  T NI+++GLC+N  +++A ++   M        
Sbjct: 443 LWKEGRKSEAEEMLQKMNEKSYQLDTVTCNIVVNGLCRNGELEKASEVVSEMWTDGTNSL 502

Query: 437 GIE---------------------IFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVT 475
           G E                      +  LI+GLCK G+L+ A + F ++  K L P  VT
Sbjct: 503 GKENPVAGLVNSIHNVSTNVPDVITYTTLINGLCKVGKLEEAKKKFIEMMAKNLHPDSVT 562

Query: 476 YSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMA 535
           Y   +   C++GK+  A   L  ME+NGC+  + T+N+L+ G     +  ++  L+ +M 
Sbjct: 563 YDTFVLNFCKQGKISSALRVLKDMERNGCSKTLQTYNSLILGLGSKGQIFEMYGLMDEMR 622

Query: 536 EPERNLVPDDTTFSIVVDLLAKDEKYHECSAV 567
             ER + PD  T++ +++ L +  K  + +++
Sbjct: 623 --ERGIHPDICTYNNMINCLCEGGKTKDATSL 652



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 148/575 (25%), Positives = 251/575 (43%), Gaps = 109/575 (18%)

Query: 78  FNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEAT 137
           +N L  +  K    D       ++   GLLPD +T N  I+        LC   ++ EA+
Sbjct: 222 YNTLVSSFCKQDMNDEAEKLVERMTEKGLLPDVVTFNSRIS-------ALCRAGKVFEAS 274

Query: 138 WLFKNMIAFGV----RPDVITYGTLINGFCRTGNLSVALRLHKKMVSGD----------- 182
            +F++M   G     +P+V+T+  ++ GFC+ G +  A  L + M  G            
Sbjct: 275 RIFRDMQMDGELGLPKPNVVTFNLMLKGFCQEGMMEEARSLVETMKKGGNFVSLESYNTW 334

Query: 183 --------------------YENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGR 222
                                ENG+  + NI+SY+I++D LC+  ++  A+ L   M   
Sbjct: 335 LLGLLRNGKLLEGRSVLDEMVENGI--EPNIYSYNIVMDGLCRNHMMLDARRLMDLMVSN 392

Query: 223 GINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNL------------------- 263
           G+ P  V  TTL+HG+C  G   E   +  EM+  G  PN                    
Sbjct: 393 GVYPDTVTYTTLLHGYCSKGKVFEAKAILNEMIRKGCHPNTYTCNTLLNSLWKEGRKSEA 452

Query: 264 ----------------LTFNVMIDCLCKGGKINEANGLLELMIQRGLN------------ 295
                           +T N++++ LC+ G++ +A+ ++  M   G N            
Sbjct: 453 EEMLQKMNEKSYQLDTVTCNIVVNGLCRNGELEKASEVVSEMWTDGTNSLGKENPVAGLV 512

Query: 296 ----------PDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCK 345
                     PD  TY +L++G C VG+++ A++ F+ M +K      V+Y+  +  +CK
Sbjct: 513 NSIHNVSTNVPDVITYTTLINGLCKVGKLEEAKKKFIEMMAKNLHPDSVTYDTFVLNFCK 572

Query: 346 ILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLST 405
              +  A+ + + +  NG  +T+ TYN+L+ GL   GQ      L DEM+   + PD+ T
Sbjct: 573 QGKISSALRVLKDMERNGCSKTLQTYNSLILGLGSKGQIFEMYGLMDEMRERGIHPDICT 632

Query: 406 YNILIDGLCKNNCVQEAVKLFH-MLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFH-K 463
           YN +I+ LC+    ++A  L H ML+       +  F  LI   CK+G    A ELF   
Sbjct: 633 YNNMINCLCEGGKTKDATSLLHEMLDKGVVSPNVSSFKILIKAFCKSGDFKVACELFDVA 692

Query: 464 LPQKGLVPTVVTYSIMIHGLCRKGKLEKAND-FLLYMEKNGCAPNVVTFNTLMHGFLQNN 522
           L   G    +  YS+M + L   GKL  A + F   +E++  + N + +  L+    ++ 
Sbjct: 693 LSVCGHKEAL--YSLMFNELLAGGKLSDAKELFEASLERSLLSKNFM-YEDLIDKLCKDG 749

Query: 523 KTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAK 557
           +      LL K+   ++    D ++F  V+D L+K
Sbjct: 750 RLDDAHGLLQKLI--DKGYCFDHSSFIPVIDGLSK 782



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 131/509 (25%), Positives = 224/509 (44%), Gaps = 72/509 (14%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           C+ G+  + EAR     M        + S+N     + +N       S   ++V  G+ P
Sbjct: 304 CQEGM--MEEARSLVETMKKGGNFVSLESYNTWLLGLLRNGKLLEGRSVLDEMVENGIEP 361

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           +  + NI+++       GLC  + + +A  L   M++ GV PD +TY TL++G+C  G +
Sbjct: 362 NIYSYNIVMD-------GLCRNHMMLDARRLMDLMVSNGVYPDTVTYTTLLHGYCSKGKV 414

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
             A  +  +M+            N ++ + +++SL KEG   +A+E+  +M  +      
Sbjct: 415 FEAKAILNEMIRKG------CHPNTYTCNTLLNSLWKEGRKSEAEEMLQKMNEKSYQLDT 468

Query: 229 VVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPR----------------------PNLLTF 266
           V C  +++G C  G  E+ + +  EM   G                        P+++T+
Sbjct: 469 VTCNIVVNGLCRNGELEKASEVVSEMWTDGTNSLGKENPVAGLVNSIHNVSTNVPDVITY 528

Query: 267 NVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHS 326
             +I+ LCK GK+ EA      M+ + L+PD  TY++ +  +C  G+I +A  +   M  
Sbjct: 529 TTLINGLCKVGKLEEAKKKFIEMMAKNLHPDSVTYDTFVLNFCKQGKISSALRVLKDMER 588

Query: 327 KGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGY 386
            GC  T+ +YN LI G      + E   L  ++   G+   + TYN +++ L + G+   
Sbjct: 589 NGCSKTLQTYNSLILGLGSKGQIFEMYGLMDEMRERGIHPDICTYNNMINCLCEGGKTKD 648

Query: 387 AQKLFDEMKLYNV-EPDLSTYNILIDGLCKNNCVQEAVKLF------------------- 426
           A  L  EM    V  P++S++ ILI   CK+   + A +LF                   
Sbjct: 649 ATSLLHEMLDKGVVSPNVSSFKILIKAFCKSGDFKVACELFDVALSVCGHKEALYSLMFN 708

Query: 427 HMLEMNKFEFGIEIFNC---------------LIDGLCKAGRLDNAWELFHKLPQKGLVP 471
            +L   K     E+F                 LID LCK GRLD+A  L  KL  KG   
Sbjct: 709 ELLAGGKLSDAKELFEASLERSLLSKNFMYEDLIDKLCKDGRLDDAHGLLQKLIDKGYCF 768

Query: 472 TVVTYSIMIHGLCRKGKLEKANDFLLYME 500
              ++  +I GL ++G  ++A++    ME
Sbjct: 769 DHSSFIPVIDGLSKRGNKQQADELGRIME 797



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 105/415 (25%), Positives = 178/415 (42%), Gaps = 47/415 (11%)

Query: 44  FLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVS 103
            LH  C  G +   EA+     M      P   + N L  ++ K           +K+  
Sbjct: 404 LLHGYCSKGKVF--EAKAILNEMIRKGCHPNTYTCNTLLNSLWKEGRKSEAEEMLQKMNE 461

Query: 104 IGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVR-------------- 149
                D +T NI++N       GLC    +++A+ +   M   G                
Sbjct: 462 KSYQLDTVTCNIVVN-------GLCRNGELEKASEVVSEMWTDGTNSLGKENPVAGLVNS 514

Query: 150 --------PDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIID 201
                   PDVITY TLING C+ G L  A +   +M++ +         +  +Y   + 
Sbjct: 515 IHNVSTNVPDVITYTTLINGLCKVGKLEEAKKKFIEMMAKNLH------PDSVTYDTFVL 568

Query: 202 SLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRP 261
           + CK+G +  A  +  +M+  G +  +    +LI G    G   E+ GL  EM + G  P
Sbjct: 569 NFCKQGKISSALRVLKDMERNGCSKTLQTYNSLILGLGSKGQIFEMYGLMDEMRERGIHP 628

Query: 262 NLLTFNVMIDCLCKGGKINEANGLLELMIQRGL-NPDRFTYNSLMDGYCLVGRIDTAREI 320
           ++ T+N MI+CLC+GGK  +A  LL  M+ +G+ +P+  ++  L+  +C  G    A E+
Sbjct: 629 DICTYNNMINCLCEGGKTKDATSLLHEMLDKGVVSPNVSSFKILIKAFCKSGDFKVACEL 688

Query: 321 FLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQ 380
           F  +    C H    Y+++ N       + +A  L+   +   +      Y  L+  L +
Sbjct: 689 F-DVALSVCGHKEALYSLMFNELLAGGKLSDAKELFEASLERSLLSKNFMYEDLIDKLCK 747

Query: 381 AGQ----AGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
            G+     G  QKL D+   +    D S++  +IDGL K    Q+A +L  ++E+
Sbjct: 748 DGRLDDAHGLLQKLIDKGYCF----DHSSFIPVIDGLSKRGNKQQADELGRIMEL 798


>gi|449462543|ref|XP_004149000.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic-like [Cucumis sativus]
          Length = 822

 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 140/509 (27%), Positives = 253/509 (49%), Gaps = 26/509 (5%)

Query: 51  SGIINLNEARYFFGYMTHMQP-------SPPISSFNLLFGAVAKNRHYDAVISFYRKLVS 103
           +G+I LN    FF  + H+         +P +  FN L     K  + +  +     ++S
Sbjct: 321 NGLIKLN----FFDKVNHVLDEMIGSGFNPNVVVFNNLIDGYCKMGNIEGALKIKDVMIS 376

Query: 104 IGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFC 163
             + P  +TL  L+       +G C  ++I+ A    + +++ G+        ++++  C
Sbjct: 377 KNITPTSVTLYSLM-------QGFCKSDQIEHAENALEEILSSGLSIHPDNCYSVVHWLC 429

Query: 164 RTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRG 223
           +      A R  K M+S ++      + +    ++++  LCK+G   +A EL+  +  +G
Sbjct: 430 KKFRYHSAFRFTKMMLSRNF------RPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKG 483

Query: 224 INPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEAN 283
              + V    LIHG C AG   E + +  EML+ G   + +T+N +I   C  GK+    
Sbjct: 484 SPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCF 543

Query: 284 GLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGY 343
            L E M +RG+ PD +TYN L+ G C VG++D A +++    + G    + +Y I++ GY
Sbjct: 544 RLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGY 603

Query: 344 CKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDL 403
           CK   +E+  +L+ +++S  +    I YN ++    Q G    A +L + MK   + P+ 
Sbjct: 604 CKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNC 663

Query: 404 STYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHK 463
           +TY+ LI G+C    V++A  L   +    F   +  +  LI G CK G++D A   + +
Sbjct: 664 ATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLE 723

Query: 464 LPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNK 523
           +    + P   TY++MI G C+ G +EKAN+ L+ M+++G  P+VVT+N L +GF + N 
Sbjct: 724 MISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVLTNGFCKAND 783

Query: 524 TSKVVELLHKMAEPERNLVPDDTTFSIVV 552
                ++  +MA     L  D+ T++ +V
Sbjct: 784 MDNAFKVCDQMA--TEGLPVDEITYTTLV 810



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 142/544 (26%), Positives = 243/544 (44%), Gaps = 56/544 (10%)

Query: 48  NCKSGIINLNEARYFFGYMTHMQPSPPISSFNLL---FGAVAKNRHYDAVISFYRKLVSI 104
           N  S   ++  A   FG  + +       +F+LL   +    +N  +   +  +  L   
Sbjct: 144 NLDSEKFHIEIANALFGLTSVVGRFEWTQAFDLLIHVYSTQFRNLGFSCAVDVFYLLARK 203

Query: 105 GLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCR 164
           G  P   T N L++        L   N  ++   +F+ M + G  PDV ++  +IN  C+
Sbjct: 204 GTFPSLKTCNFLLS-------SLVKANEFEKCCEVFRVM-SEGACPDVFSFTNVINALCK 255

Query: 165 TGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGI 224
            G +  A+ L  KM        L    N+ +Y+ II+ LC+ G +D A EL  +M  +G+
Sbjct: 256 GGKMENAIELFMKM------EKLGISPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKGV 309

Query: 225 NPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANG 284
            P +     LI+G      +++VN +  EM+  G  PN++ FN +ID  CK G I  A  
Sbjct: 310 QPNLKTYGALINGLIKLNFFDKVNHVLDEMIGSGFNPNVVVFNNLIDGYCKMGNIEGALK 369

Query: 285 LLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAR----EIF---LSMHSKGCKHTVVSY- 336
           + ++MI + + P   T  SLM G+C   +I+ A     EI    LS+H   C ++VV + 
Sbjct: 370 IKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDNC-YSVVHWL 428

Query: 337 ----------------------------NILINGYCKILNVEEAMSLYRQIISNGVRQTV 368
                                        +L+ G CK     EA  L+ +++  G   + 
Sbjct: 429 CKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPASK 488

Query: 369 ITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHM 428
           +T N L+ GL  AG+   A ++  EM    +  D  TYN LI G C    V+   +L   
Sbjct: 489 VTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREE 548

Query: 429 LEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGK 488
           +     +  I  +N L+ GLC  G+LD+A +L+ +    GL+  + TY IM+ G C+  +
Sbjct: 549 MTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANR 608

Query: 489 LEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTF 548
           +E   +    +       N + +N ++    QN   +  ++LL  M    + ++P+  T+
Sbjct: 609 IEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMK--SKGILPNCATY 666

Query: 549 SIVV 552
           S ++
Sbjct: 667 SSLI 670



 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 113/398 (28%), Positives = 195/398 (48%), Gaps = 13/398 (3%)

Query: 85  VAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMI 144
           + K   Y +   F + ++S    P  L L +L+ C      GLC + +  EAT L+  ++
Sbjct: 428 LCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLV-C------GLCKDGKHLEATELWFRLL 480

Query: 145 AFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLC 204
             G     +T   LI+G C  G L  A R+ K+M+    E GL    +  +Y+ +I   C
Sbjct: 481 EKGSPASKVTSNALIHGLCGAGKLPEASRIVKEML----ERGL--PMDRITYNALILGFC 534

Query: 205 KEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLL 264
            EG V+    L  EM  RGI P +     L+ G C  G  ++   L+ E    G   N+ 
Sbjct: 535 NEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIH 594

Query: 265 TFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSM 324
           T+ +M++  CK  +I +   L   ++ + +  +   YN ++  +C  G +  A ++  +M
Sbjct: 595 TYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENM 654

Query: 325 HSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQA 384
            SKG      +Y+ LI+G C I  VE+A  L  ++   G    V+ Y  L+ G  + GQ 
Sbjct: 655 KSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQM 714

Query: 385 GYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCL 444
             A+  + EM  +N+ P+  TY ++IDG CK   +++A  L   ++ +     +  +N L
Sbjct: 715 DTAESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVL 774

Query: 445 IDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHG 482
            +G CKA  +DNA+++  ++  +GL    +TY+ ++HG
Sbjct: 775 TNGFCKANDMDNAFKVCDQMATEGLPVDEITYTTLVHG 812



 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 87/278 (31%), Positives = 139/278 (50%), Gaps = 13/278 (4%)

Query: 66  MTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKER 125
           MT     P I ++N L   +      D  I  + +  + GL+ +  T  I++        
Sbjct: 549 MTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMM-------E 601

Query: 126 GLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYEN 185
           G C  NRI++   LF  +++  +  + I Y  +I   C+ GN++ AL+L + M S     
Sbjct: 602 GYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKS----K 657

Query: 186 GLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWE 245
           G++   N  +YS +I  +C  GLV+ AK L  EM+  G  P VV  T LI G+C  G  +
Sbjct: 658 GILP--NCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMD 715

Query: 246 EVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLM 305
                ++EM+     PN  T+ VMID  CK G + +AN LL  M + G+ PD  TYN L 
Sbjct: 716 TAESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVLT 775

Query: 306 DGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGY 343
           +G+C    +D A ++   M ++G     ++Y  L++G+
Sbjct: 776 NGFCKANDMDNAFKVCDQMATEGLPVDEITYTTLVHGW 813



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 76/280 (27%), Positives = 135/280 (48%), Gaps = 3/280 (1%)

Query: 288 LMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKIL 347
           L+ ++G  P   T N L+         +   E+F  M    C   V S+  +IN  CK  
Sbjct: 199 LLARKGTFPSLKTCNFLLSSLVKANEFEKCCEVFRVMSEGACP-DVFSFTNVINALCKGG 257

Query: 348 NVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYN 407
            +E A+ L+ ++   G+   V+TYN +++GL Q G+   A +L ++M +  V+P+L TY 
Sbjct: 258 KMENAIELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQPNLKTYG 317

Query: 408 ILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQK 467
            LI+GL K N   +   +   +  + F   + +FN LIDG CK G ++ A ++   +  K
Sbjct: 318 ALINGLIKLNFFDKVNHVLDEMIGSGFNPNVVVFNNLIDGYCKMGNIEGALKIKDVMISK 377

Query: 468 GLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKV 527
            + PT VT   ++ G C+  ++E A + L  +  +G + +     +++H   +  +    
Sbjct: 378 NITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDNCYSVVHWLCKKFRYHSA 437

Query: 528 VELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAV 567
                 M    RN  P D   +++V  L KD K+ E + +
Sbjct: 438 FRFTKMML--SRNFRPSDLLLTMLVCGLCKDGKHLEATEL 475


>gi|414875530|tpg|DAA52661.1| TPA: hypothetical protein ZEAMMB73_467633 [Zea mays]
          Length = 987

 Score =  219 bits (557), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 150/518 (28%), Positives = 245/518 (47%), Gaps = 40/518 (7%)

Query: 78  FNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKER------------ 125
           +NL   ++ +    + +   Y  LV  GLLPD +T N +I  +  K              
Sbjct: 147 YNLALRSLLRFDMTEYMGKLYSHLVQEGLLPDTVTYNTMIMAYCKKGSLAIAHRYFCLLR 206

Query: 126 ----------------GLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLS 169
                           G C  + +++A WL   M   G R +  +Y  LI G      + 
Sbjct: 207 ESGMQMDTYTCNALLLGYCRTSDLRKACWLLMMMPLMGCRRNEYSYTILIQGLYEARCVR 266

Query: 170 VALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVV 229
            AL L   MV    ++G     N+  Y+++I  LCKEG +  A+ L  EM  RG+ P+V 
Sbjct: 267 EALVLVFMMV----QDG--CSLNLHMYTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVW 320

Query: 230 VCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELM 289
               +I G+C +G  ++  G+   M   G  P+  T+N +I  LC GGK++EA  LL   
Sbjct: 321 TYNAMIDGYCKSGRMKDALGIKALMEQNGCNPDDWTYNSLIYGLC-GGKLDEAEELLNGA 379

Query: 290 IQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNV 349
           I RG  P   T+ +L++GYC   RID A  +  +M S  CK  + +Y +LIN   K   +
Sbjct: 380 IARGFTPTVITFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQAYGVLINVLIKKCRL 439

Query: 350 EEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNIL 409
           +EA     ++ +NG+   V+ Y +++ G  + G  G A ++F  M+     P+  TY  L
Sbjct: 440 KEAKETLNEMFANGLAPNVVIYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSL 499

Query: 410 IDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGL 469
           I GL ++  + +A+ L   ++ +    G+  +  LI G CK    DNA+ LF  + + GL
Sbjct: 500 IYGLIQDKKLHKAMALITKMQEDGITPGVIAYTTLIQGQCKKHEFDNAFRLFEMMEKNGL 559

Query: 470 VPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVE 529
            P    Y+++   LC+ G+ E+A  FL+   + G     VT+ +L+ GF +   T     
Sbjct: 560 TPDEQAYNVLTDALCKSGRAEEAYSFLV---RKGVVLTKVTYTSLVDGFSKAGNTDFAAV 616

Query: 530 LLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAV 567
           L+ KM         D  T+S+++  L K +K +E  ++
Sbjct: 617 LIEKMV--NEGCKADLYTYSVLLQALCKQKKLNEALSI 652



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 130/497 (26%), Positives = 234/497 (47%), Gaps = 34/497 (6%)

Query: 72  SPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVEN 131
           +P + +F  L     K    D  +     ++S     D     +LIN    K    C   
Sbjct: 385 TPTVITFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQAYGVLINVLIKK----C--- 437

Query: 132 RIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKT 191
           R+KEA      M A G+ P+V+ Y ++I+G+C+ G +  AL + K M   ++E       
Sbjct: 438 RLKEAKETLNEMFANGLAPNVVIYTSIIDGYCKVGMVGAALEVFKLM---EHEG---CHP 491

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
           N ++Y  +I  L ++  + KA  L  +M+  GI P V+  TTLI G C    ++    LF
Sbjct: 492 NAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVIAYTTLIQGQCKKHEFDNAFRLF 551

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
             M   G  P+   +NV+ D LCK G+  EA   L   +++G+   + TY SL+DG+   
Sbjct: 552 EMMEKNGLTPDEQAYNVLTDALCKSGRAEEAYSFL---VRKGVVLTKVTYTSLVDGFSKA 608

Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
           G  D A  +   M ++GCK  + +Y++L+   CK   + EA+S+  Q+  +GV+  ++ Y
Sbjct: 609 GNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIVAY 668

Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
             ++S + + G+  +A+ LF+EM     +P  +TY + I   CK   ++EA  L   +E 
Sbjct: 669 TIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGQIEEAEHLIGEMER 728

Query: 432 NKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIH---------- 481
           +     +  ++  I+G    G +D A+    ++      P   TY +++           
Sbjct: 729 DGVTPDVVTYHIFINGCGHMGYMDRAFSTLKRMVDASCEPNCWTYWLLLKHFLKMSLINA 788

Query: 482 ------GLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMA 535
                 G+    +L      L  M K+G  P VVT+++++ GF +  +  +   LL  M 
Sbjct: 789 HYIDTSGMWNWIELNTVWQLLERMMKHGLNPTVVTYSSIIAGFCKATRLEEACVLLDHML 848

Query: 536 EPERNLVPDDTTFSIVV 552
              + + P++  +++++
Sbjct: 849 --GKAISPNEEIYTMLI 863



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 120/495 (24%), Positives = 200/495 (40%), Gaps = 76/495 (15%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQP---SPPISSFNLLFGAVAKNRHYDAVISFY 98
           N + + +   G+I   +       +T MQ    +P + ++  L     K   +D     +
Sbjct: 492 NAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVIAYTTLIQGQCKKHEFDNAFRLF 551

Query: 99  RKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTL 158
             +   GL PD    N+L +        LC   R +EA   +  ++  GV    +TY +L
Sbjct: 552 EMMEKNGLTPDEQAYNVLTD-------ALCKSGRAEEA---YSFLVRKGVVLTKVTYTSL 601

Query: 159 INGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLE 218
           ++GF + GN   A  L +KMV+         K ++++YS+++ +LCK+  +++A  +  +
Sbjct: 602 VDGFSKAGNTDFAAVLIEKMVNEG------CKADLYTYSVLLQALCKQKKLNEALSILDQ 655

Query: 219 MKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGK 278
           M   G+   +V  T +I      G  +    LF EM+  G +P+  T+ V I   CK G+
Sbjct: 656 MTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGQ 715

Query: 279 INEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGC--------- 329
           I EA  L+  M + G+ PD  TY+  ++G   +G +D A      M    C         
Sbjct: 716 IEEAEHLIGEMERDGVTPDVVTYHIFINGCGHMGYMDRAFSTLKRMVDASCEPNCWTYWL 775

Query: 330 --------------------------------------KH----TVVSYNILINGYCKIL 347
                                                 KH    TVV+Y+ +I G+CK  
Sbjct: 776 LLKHFLKMSLINAHYIDTSGMWNWIELNTVWQLLERMMKHGLNPTVVTYSSIIAGFCKAT 835

Query: 348 NVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYN 407
            +EEA  L   ++   +      Y  L+         G       +M  +  +P L +Y+
Sbjct: 836 RLEEACVLLDHMLGKAISPNEEIYTMLIKCCCDIKLFGKDVSFVTDMIEFGFQPQLESYH 895

Query: 408 ILIDGLCKNNCVQEAVKLFHML---EMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKL 464
            LI GLC       A  LF  L   + N  E   +I N   DGL KAG +D   +L   +
Sbjct: 896 YLIVGLCDEGDYDRAKSLFCDLLGMDYNHNEVAWKILN---DGLLKAGHVDFCSQLLAAM 952

Query: 465 PQKGLVPTVVTYSIM 479
             +       +YS++
Sbjct: 953 DNRHCRIDSESYSML 967


>gi|297741319|emb|CBI32450.3| unnamed protein product [Vitis vinifera]
          Length = 851

 Score =  219 bits (557), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 110/330 (33%), Positives = 190/330 (57%), Gaps = 2/330 (0%)

Query: 224 INPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEAN 283
           ++P V     LI GFC  G  ++  G F EM   G  PN++T+N +ID  CK G+I+EA 
Sbjct: 6   VSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAF 65

Query: 284 GLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGY 343
           GLL+ M  +G+ P+  +YN +++G C  G +  A EI   M  KG     V+YN L+NGY
Sbjct: 66  GLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGY 125

Query: 344 CKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDL 403
           CK  N  +A+ ++ +++ NGV  +V+TY  L++ + +A     A + FD+M++  + P+ 
Sbjct: 126 CKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNE 185

Query: 404 STYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHK 463
            TY  LIDG  +   + EA ++ + +  + F   +  +N  I G C   R++ A  +  +
Sbjct: 186 RTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQE 245

Query: 464 LPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNK 523
           + +KGL P VV+YS +I G CRKG+L++A      M + G +P+ VT+++L+ G  +  +
Sbjct: 246 MVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRR 305

Query: 524 TSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
            ++  +L  +M   +  L PD+ T++ +++
Sbjct: 306 LTEACDLSQEML--DMGLPPDEFTYTTLIN 333



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 122/373 (32%), Positives = 192/373 (51%), Gaps = 2/373 (0%)

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
           N+++Y+I+I   C  G + K    F EM+  G  P VV   TLI  +C  G  +E  GL 
Sbjct: 9   NVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLL 68

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
             M   G +PNL+++NV+I+ LC+ G + EA  +LE M  +G  PD  TYN+L++GYC  
Sbjct: 69  KSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKE 128

Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
           G    A  I   M   G   +VV+Y  LIN  CK  N+  AM  + Q+   G+R    TY
Sbjct: 129 GNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTY 188

Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
            TL+ G  + G    A ++ +EM      P + TYN  I G C    ++EA+ +   +  
Sbjct: 189 TTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVE 248

Query: 432 NKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEK 491
                 +  ++ +I G C+ G LD A+++  ++ +KG+ P  VTYS +I GLC   +L +
Sbjct: 249 KGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTE 308

Query: 492 ANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIV 551
           A D    M   G  P+  T+ TL++ +      +K + L  +M    +  +PD  T+S++
Sbjct: 309 ACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMI--HKGFLPDAVTYSVL 366

Query: 552 VDLLAKDEKYHEC 564
           ++ L K  +  E 
Sbjct: 367 INGLNKQARTREA 379



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 145/525 (27%), Positives = 244/525 (46%), Gaps = 30/525 (5%)

Query: 66  MTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKER 125
           M   + SP + ++N+L             +  + ++   G LP+ +T N LI+ +     
Sbjct: 1   MIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAY----- 55

Query: 126 GLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYEN 185
             C   RI EA  L K+M + G++P++I+Y  +ING CR G++  A  + ++M    +  
Sbjct: 56  --CKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGF-- 111

Query: 186 GLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWE 245
                 +  +Y+ +++  CKEG   +A  +  EM   G++P+VV  T LI+  C A N  
Sbjct: 112 ----TPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLN 167

Query: 246 EVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLM 305
                F +M   G RPN  T+  +ID   + G +NEA  +L  M + G +P   TYN+ +
Sbjct: 168 RAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFI 227

Query: 306 DGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVR 365
            G+C++ R++ A  +   M  KG    VVSY+ +I+G+C+   ++ A  + ++++  GV 
Sbjct: 228 HGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVS 287

Query: 366 QTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKL 425
              +TY++L+ GL +  +   A  L  EM    + PD  TY  LI+  C    + +A+ L
Sbjct: 288 PDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHL 347

Query: 426 FHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIH---- 481
              +    F      ++ LI+GL K  R   A  L  KL  +  VP+ VTY  +I     
Sbjct: 348 HDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIENCSN 407

Query: 482 -----------GLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVEL 530
                      G C KG + +A+     M +    P    +N ++HG  +     K   L
Sbjct: 408 IEFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNL 467

Query: 531 LHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKSSYRAC 575
             +M       VP   T   ++  L K+    E S V   + R+C
Sbjct: 468 YKEMIHS--GFVPHTVTVITLIKALFKEGMNEEMSEVIGDTLRSC 510



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 133/490 (27%), Positives = 232/490 (47%), Gaps = 35/490 (7%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
           N  +   CK G I+  EA      M+     P + S+N++   + +            ++
Sbjct: 49  NTLIDAYCKMGRID--EAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEM 106

Query: 102 VSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLING 161
              G  PD +T N L+N       G C E    +A  +   M+  GV P V+TY  LIN 
Sbjct: 107 GYKGFTPDEVTYNTLLN-------GYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINS 159

Query: 162 FCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKG 221
            C+  NL+ A+    +M       GL  + N  +Y+ +ID   ++GL+++A  +  EM  
Sbjct: 160 MCKARNLNRAMEFFDQMRI----RGL--RPNERTYTTLIDGFSRQGLLNEAYRILNEMTE 213

Query: 222 RGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINE 281
            G +P+VV     IHG C     EE  G+  EM++ G  P++++++ +I   C+ G+++ 
Sbjct: 214 SGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDR 273

Query: 282 ANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILIN 341
           A  + + M+++G++PD  TY+SL+ G C + R+  A ++   M   G      +Y  LIN
Sbjct: 274 AFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLIN 333

Query: 342 GYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEP 401
            YC   ++ +A+ L+ ++I  G     +TY+ L++GL +  +   A++L  ++      P
Sbjct: 334 AYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVP 393

Query: 402 DLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELF 461
              TY+ LI+     NC             +  EF   +   LI G C  G +  A  +F
Sbjct: 394 SDVTYDTLIE-----NC-------------SNIEFKSVV--ALIKGFCMKGLMHEADRVF 433

Query: 462 HKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQN 521
             + ++   P    Y+++IHG CR G L KA +    M  +G  P+ VT  TL+    + 
Sbjct: 434 ESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIHSGFVPHTVTVITLIKALFKE 493

Query: 522 NKTSKVVELL 531
               ++ E++
Sbjct: 494 GMNEEMSEVI 503


>gi|125540047|gb|EAY86442.1| hypothetical protein OsI_07823 [Oryza sativa Indica Group]
          Length = 703

 Score =  218 bits (556), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 144/515 (27%), Positives = 240/515 (46%), Gaps = 34/515 (6%)

Query: 68  HMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGL 127
           H  P+P   ++N +  ++ +     + + +   +V  G  PD  T N LI        G 
Sbjct: 4   HAPPAPAAPTYNAVIRSLCRRADLASALRYLSLMVRSGWRPDAYTFNSLI-------VGY 56

Query: 128 CVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKM--------- 178
           C  N++  A  LF  M   G   DV++Y  LI GFC TG +  A+ L  +M         
Sbjct: 57  CRTNQVDVARDLFDKMPLRGFAQDVVSYAALIEGFCETGRIDEAVELFGEMDQPDMHMYA 116

Query: 179 -------VSGDYENGLI---------SKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGR 222
                   +G  E GL+          + +  +Y+ ++D  C E    +A+E+  EM  +
Sbjct: 117 ALVKGLCKAGRGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCWERKAKEAEEMLQEMFEK 176

Query: 223 GINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEA 282
           G+ P VV CT +I+ +C  G   +   +   M   G +PN+ T+N ++   C  GK+++A
Sbjct: 177 GLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKA 236

Query: 283 NGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILING 342
             LL  M   G+NPD  TYN L+ G C+ G I++A  +   M   G      +YN LIN 
Sbjct: 237 MALLNKMRVCGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINA 296

Query: 343 YCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPD 402
            CK    ++A SL+  + + G++   +T+N+L++GL ++G+   A K  ++M      PD
Sbjct: 297 LCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKVDIAWKFLEKMVSAGCTPD 356

Query: 403 LSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFH 462
             TY+  I+ LCK    QE +     +     +     +  +I  L K          + 
Sbjct: 357 TYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWG 416

Query: 463 KLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNN 522
           ++   G  P VVTY+  +   C +G+L +A + L+ M KNG   + + +NTLM G     
Sbjct: 417 EMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIG 476

Query: 523 KTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAK 557
           +T   V +L +M       VP+  T+ I++  L +
Sbjct: 477 QTDHAVSILKQMTSVAS--VPNQFTYFILLRHLVR 509



 Score =  195 bits (495), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 137/531 (25%), Positives = 240/531 (45%), Gaps = 40/531 (7%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           C++G I+  EA   FG M      P +  +  L   + K    +  +   R++  +G  P
Sbjct: 92  CETGRID--EAVELFGEMDQ----PDMHMYAALVKGLCKAGRGEEGLLMLRRMKELGWRP 145

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
                  +++         C E + KEA  + + M   G+ P V+T   +IN +C+ G +
Sbjct: 146 STRAYAAVVDF-------RCWERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRM 198

Query: 169 SVALRLHKKM-VSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPA 227
           S ALR+ + M + G        K N+++Y+ ++   C EG V KA  L  +M+  G+NP 
Sbjct: 199 SDALRVLELMKLRG-------CKPNVWTYNALVQGFCNEGKVHKAMALLNKMRVCGVNPD 251

Query: 228 VVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLE 287
            V    LI G C  G+ E    L   M   G   +  T+N +I+ LCK G+ ++A  L +
Sbjct: 252 AVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFD 311

Query: 288 LMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKIL 347
            +  RG+ P+  T+NSL++G C  G++D A +    M S GC     +Y+  I   CK+ 
Sbjct: 312 SLETRGIKPNAVTFNSLINGLCKSGKVDIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMK 371

Query: 348 NVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYN 407
             +E +S   +++   V+ + + Y  ++  L +    G   + + EM      PD+ TY 
Sbjct: 372 GSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYT 431

Query: 408 ILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQK 467
             +   C    + EA  +   +  N        +N L+DG    G+ D+A  +  ++   
Sbjct: 432 TSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSV 491

Query: 468 GLVPTVVTYSIMIHGLCRK---------------GKLEKANDFLLY--MEKNGCAPNVVT 510
             VP   TY I++  L R                  +E  + F L+  M+KN   PN  T
Sbjct: 492 ASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGT 551

Query: 511 FNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKY 561
           +++++ GF ++ +T +   L+  M E   +L  D   ++ +V    K ++Y
Sbjct: 552 YSSILEGFSEDGRTEEATSLVSLMKEDSISLNED--IYTALVTCFCKSKRY 600



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 128/510 (25%), Positives = 234/510 (45%), Gaps = 73/510 (14%)

Query: 105 GLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCR 164
           G  P+  T N L+       +G C E ++ +A  L   M   GV PD +TY  LI G C 
Sbjct: 212 GCKPNVWTYNALV-------QGFCNEGKVHKAMALLNKMRVCGVNPDAVTYNLLIRGQCI 264

Query: 165 TGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGI 224
            G++  A RL  +++ GD   GLI+  + ++Y+ +I++LCK+G  D+A  LF  ++ RGI
Sbjct: 265 DGHIESAFRL-LRLMEGD---GLIA--DQYTYNALINALCKDGRTDQACSLFDSLETRGI 318

Query: 225 NPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANG 284
            P  V   +LI+G C +G  +       +M+  G  P+  T++  I+ LCK     E   
Sbjct: 319 KPNAVTFNSLINGLCKSGKVDIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLS 378

Query: 285 LLELMIQR-----------------------------------GLNPDRFTYNSLMDGYC 309
            +  M+Q+                                   G NPD  TY + M  YC
Sbjct: 379 FIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYC 438

Query: 310 LVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVI 369
           + GR++ A  + + M   G     ++YN L++G+  I   + A+S+ +Q+ S        
Sbjct: 439 IEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQF 498

Query: 370 TYNTLL-----------------SGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDG 412
           TY  LL                 +G+++A +      LFD MK     P+  TY+ +++G
Sbjct: 499 TYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEG 558

Query: 413 LCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPT 472
             ++   +EA  L  +++ +      +I+  L+   CK+ R  +AW L   + Q G +P 
Sbjct: 559 FSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPH 618

Query: 473 VVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTS---KVVE 529
           +++Y  ++ GL  +G+ +KA +  +       +P+ + +  ++ G ++   +    +++ 
Sbjct: 619 LMSYQHLLSGLICEGQTDKAKEIFMNSRWKDYSPDEIVWKVIIDGLIKKGHSDISREMII 678

Query: 530 LLHKMAEPERNLVPDDTTFSIVVDLLAKDE 559
           +L +M     N  P   T++++ + L   E
Sbjct: 679 MLERM-----NCRPSHQTYAMLTEELPDRE 703



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 90/310 (29%), Positives = 151/310 (48%), Gaps = 14/310 (4%)

Query: 265 TFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSM 324
           T+N +I  LC+   +  A   L LM++ G  PD +T+NSL+ GYC   ++D AR++F  M
Sbjct: 13  TYNAVIRSLCRRADLASALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKM 72

Query: 325 HSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQA 384
             +G    VVSY  LI G+C+   ++EA+ L+ ++    +      Y  L+ GL +AG+ 
Sbjct: 73  PLRGFAQDVVSYAALIEGFCETGRIDEAVELFGEMDQPDMHM----YAALVKGLCKAGRG 128

Query: 385 GYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIE--IFN 442
                +   MK     P    Y  ++D  C     +EA ++   +    FE G+   +  
Sbjct: 129 EEGLLMLRRMKELGWRPSTRAYAAVVDFRCWERKAKEAEEMLQEM----FEKGLAPCVVT 184

Query: 443 C--LIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYME 500
           C  +I+  CK GR+ +A  +   +  +G  P V TY+ ++ G C +GK+ KA   L  M 
Sbjct: 185 CTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMALLNKMR 244

Query: 501 KNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEK 560
             G  P+ VT+N L+ G   +        LL  M      L+ D  T++ +++ L KD +
Sbjct: 245 VCGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGD--GLIADQYTYNALINALCKDGR 302

Query: 561 YHECSAVSKS 570
             +  ++  S
Sbjct: 303 TDQACSLFDS 312


>gi|30794106|gb|AAP40495.1| unknown protein [Arabidopsis thaliana]
          Length = 974

 Score =  218 bits (556), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 162/576 (28%), Positives = 262/576 (45%), Gaps = 55/576 (9%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CK  I  L +A+     M  +  S    +++LL   + K R+ DA      ++VS G+  
Sbjct: 288 CK--IKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINI 345

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
                +  I C  +KE        +++A  LF  MIA G+ P    Y +LI G+CR  N+
Sbjct: 346 KPYMYDCCI-CVMSKE------GVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNV 398

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
                L   +V     N +IS    ++Y  ++  +C  G +D A  +  EM   G  P V
Sbjct: 399 RQGYEL---LVEMKKRNIVISP---YTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNV 452

Query: 229 VVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLEL 288
           V+ TTLI  F     + +   +  EM + G  P++  +N +I  L K  +++EA   L  
Sbjct: 453 VIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVE 512

Query: 289 MIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILN 348
           M++ GL P+ FTY + + GY       +A +    M   G     V    LIN YCK   
Sbjct: 513 MVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKEK 572

Query: 349 VEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNI 408
           V EA S YR ++  G+     TY  L++GLF+  +   A+++F EM+   + PD+ +Y +
Sbjct: 573 VIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGV 632

Query: 409 LIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKG 468
           LI+G  K   +Q+A  +F  +        + I+N L+ G C++G ++ A EL  ++  KG
Sbjct: 633 LINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKG 692

Query: 469 LVPTVVTYSIMIHGLCRKGKLEKANDFLLYME---------------------------- 500
           L P  VTY  +I G C+ G L +A  F L+ E                            
Sbjct: 693 LHPNAVTYCTIIDGYCKSGDLAEA--FRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVER 750

Query: 501 --------KNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEP--ERNLVPDDTTFSI 550
                   K GCA +   FN L++   +  KT    E+L+++ +   +R   P+D T++I
Sbjct: 751 AITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNI 810

Query: 551 VVDLLAKDEKYHECSAVSKSSYRACLYVTIFQPSSL 586
           ++D L K+        +      A L  T+   +SL
Sbjct: 811 MIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSL 846



 Score =  211 bits (537), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 148/521 (28%), Positives = 246/521 (47%), Gaps = 54/521 (10%)

Query: 83  GAVAKNRHYDAVISFY--RKLVSIG--LLPDFLTLNILIN--CFGNKERGLCVENRIKEA 136
           G + + + Y ++I  Y   K V  G  LL +    NI+I+   +G   +G+C    +  A
Sbjct: 377 GLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGA 436

Query: 137 TWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSY 196
             + K MIA G RP+V+ Y TLI  F +      A+R+ K+M     E G+    +IF Y
Sbjct: 437 YNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEM----KEQGI--APDIFCY 490

Query: 197 SIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLD 256
           + +I  L K   +D+A+   +EM   G+ P        I G+  A  +   +    EM +
Sbjct: 491 NSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRE 550

Query: 257 LGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDT 316
            G  PN +    +I+  CK  K+ EA      M+ +G+  D  TY  LM+G     ++D 
Sbjct: 551 CGVLPNKVLCTGLINEYCKKEKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDD 610

Query: 317 AREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLS 376
           A EIF  M  KG    V SY +LING+ K+ N+++A S++ +++  G+   VI YN LL 
Sbjct: 611 AEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLG 670

Query: 377 GLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEF 436
           G  ++G+   A++L DEM +  + P+  TY  +IDG CK+  + EA +LF  +++     
Sbjct: 671 GFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVP 730

Query: 437 GIEIFNCLIDGLCKAGRLDNAWELF---------HKLPQKGLV----------------- 470
              ++  L+DG C+   ++ A  +F            P   L+                 
Sbjct: 731 DSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLN 790

Query: 471 ------------PTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGF 518
                       P  VTY+IMI  LC++G LE A +    M+     P V+T+ +L++G+
Sbjct: 791 RLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGY 850

Query: 519 LQNNKTSKVVELLHKMAEP-ERNLVPDDTTFSIVVDLLAKD 558
              +K  +  E+     E     + PD   +S++++   K+
Sbjct: 851 ---DKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKE 888



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 131/491 (26%), Positives = 240/491 (48%), Gaps = 25/491 (5%)

Query: 66  MTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKER 125
           M     +P I  +N L   ++K +  D   SF  ++V  GL P+  T    I+       
Sbjct: 478 MKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFIS------- 530

Query: 126 GLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYEN 185
           G    +    A    K M   GV P+ +    LIN +C+   +  A   ++ MV    + 
Sbjct: 531 GYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKEKVIEACSAYRSMV----DQ 586

Query: 186 GLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWE 245
           G++      +Y+++++ L K   VD A+E+F EM+G+GI P V     LI+GF   GN +
Sbjct: 587 GILGDAK--TYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQ 644

Query: 246 EVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLM 305
           + + +F EM++ G  PN++ +N+++   C+ G+I +A  LL+ M  +GL+P+  TY +++
Sbjct: 645 KASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTII 704

Query: 306 DGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVR 365
           DGYC  G +  A  +F  M  KG       Y  L++G C++ +VE A++++      G  
Sbjct: 705 DGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIF-GTNKKGCA 763

Query: 366 QTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVE----PDLSTYNILIDGLCKNNCVQE 421
            +   +N L++ +F+ G+     ++ + +   + +    P+  TYNI+ID LCK   ++ 
Sbjct: 764 SSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEA 823

Query: 422 AVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIH 481
           A +LFH ++       +  +  L++G  K GR    + +F +    G+ P  + YS++I+
Sbjct: 824 AKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIIN 883

Query: 482 GLCRKGKLEKA-----NDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAE 536
              ++G   KA       F      +GC  ++ T   L+ GF +  +     +++  M  
Sbjct: 884 AFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVR 943

Query: 537 PERNLVPDDTT 547
            +   +PD  T
Sbjct: 944 LQ--YIPDSAT 952



 Score =  194 bits (494), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 134/497 (26%), Positives = 226/497 (45%), Gaps = 50/497 (10%)

Query: 92  DAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPD 151
           D  +     ++  GL+P   T ++LI+       GLC   R+++A  L   M + GV  D
Sbjct: 259 DGALKLKESMICKGLVPLKYTYDVLID-------GLCKIKRLEDAKSLLVEMDSLGVSLD 311

Query: 152 VITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDK 211
             TY  LI+G  +  N   A  L  +MVS    +G+  K   + Y   I  + KEG+++K
Sbjct: 312 NHTYSLLIDGLLKGRNADAAKGLVHEMVS----HGINIKP--YMYDCCICVMSKEGVMEK 365

Query: 212 AKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMID 271
           AK LF  M   G+ P      +LI G+C   N  +   L +EM       +  T+  ++ 
Sbjct: 366 AKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVK 425

Query: 272 CLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKH 331
            +C  G ++ A  +++ MI  G  P+   Y +L+  +    R   A  +   M  +G   
Sbjct: 426 GMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAP 485

Query: 332 TVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLF 391
            +  YN LI G  K   ++EA S   +++ NG++    TY   +SG  +A +   A K  
Sbjct: 486 DIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYV 545

Query: 392 DEMKLYNVEP-----------------------------------DLSTYNILIDGLCKN 416
            EM+   V P                                   D  TY +L++GL KN
Sbjct: 546 KEMRECGVLPNKVLCTGLINEYCKKEKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKN 605

Query: 417 NCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTY 476
           + V +A ++F  +        +  +  LI+G  K G +  A  +F ++ ++GL P V+ Y
Sbjct: 606 DKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIY 665

Query: 477 SIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAE 536
           ++++ G CR G++EKA + L  M   G  PN VT+ T++ G+ ++   ++   L  +M  
Sbjct: 666 NMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEM-- 723

Query: 537 PERNLVPDDTTFSIVVD 553
             + LVPD   ++ +VD
Sbjct: 724 KLKGLVPDSFVYTTLVD 740



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 128/512 (25%), Positives = 229/512 (44%), Gaps = 38/512 (7%)

Query: 78  FNLLF-GAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEA 136
           F +LF G +AK    +AV  F   +  + L+P      +L++        L   NR+   
Sbjct: 154 FGILFDGYIAKGYIEEAVFVFSSSM-GLELVPRLSRCKVLLD-------ALLRWNRLDLF 205

Query: 137 TWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSV---------------------ALRLH 175
             ++K M+   V  DV TY  LI   CR GN+ +                     AL+L 
Sbjct: 206 WDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLK 265

Query: 176 KKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLI 235
           + M+      GL+     ++Y ++ID LCK   ++ AK L +EM   G++      + LI
Sbjct: 266 ESMIC----KGLVPLK--YTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLI 319

Query: 236 HGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLN 295
            G     N +   GL  EM+  G       ++  I  + K G + +A  L + MI  GL 
Sbjct: 320 DGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLI 379

Query: 296 PDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSL 355
           P    Y SL++GYC    +    E+ + M  +    +  +Y  ++ G C   +++ A ++
Sbjct: 380 PQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNI 439

Query: 356 YRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCK 415
            +++I++G R  V+ Y TL+    Q  + G A ++  EMK   + PD+  YN LI GL K
Sbjct: 440 VKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSK 499

Query: 416 NNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVT 475
              + EA      +  N  +     +   I G  +A    +A +   ++ + G++P  V 
Sbjct: 500 AKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVL 559

Query: 476 YSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMA 535
            + +I+  C+K K+ +A      M   G   +  T+  LM+G  +N+K     E+  +M 
Sbjct: 560 CTGLINEYCKKEKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMR 619

Query: 536 EPERNLVPDDTTFSIVVDLLAKDEKYHECSAV 567
              + + PD  ++ ++++  +K     + S++
Sbjct: 620 --GKGIAPDVFSYGVLINGFSKLGNMQKASSI 649



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 110/382 (28%), Positives = 172/382 (45%), Gaps = 58/382 (15%)

Query: 77  SFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEA 136
           ++ +L   + KN   D     +R++   G+ PD  +  +LIN F            +++A
Sbjct: 594 TYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKL-------GNMQKA 646

Query: 137 TWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKM-VSGDYENGLISKTNIFS 195
           + +F  M+  G+ P+VI Y  L+ GFCR+G +  A  L  +M V G + N +       +
Sbjct: 647 SSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAV-------T 699

Query: 196 YSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFC---------------- 239
           Y  IID  CK G + +A  LF EMK +G+ P   V TTL+ G C                
Sbjct: 700 YCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNK 759

Query: 240 --CAG---------NW-----------EEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGG 277
             CA          NW           E +N L     D   +PN +T+N+MID LCK G
Sbjct: 760 KGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEG 819

Query: 278 KINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYN 337
            +  A  L   M    L P   TY SL++GY  +GR      +F    + G +   + Y+
Sbjct: 820 NLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYS 879

Query: 338 ILINGYCKILNVEEAMSLYRQI-----ISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFD 392
           ++IN + K     +A+ L  Q+     + +G + ++ T   LLSG  + G+   A+K+ +
Sbjct: 880 VIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVME 939

Query: 393 EMKLYNVEPDLSTYNILIDGLC 414
            M      PD +T   LI+  C
Sbjct: 940 NMVRLQYIPDSATVIELINESC 961



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 75/313 (23%), Positives = 138/313 (44%), Gaps = 48/313 (15%)

Query: 51  SGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDF 110
           S + N+ +A   F  M     +P +  +N+L G   ++   +       ++   GL P+ 
Sbjct: 638 SKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNA 697

Query: 111 LTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSV 170
           +T   +I+       G C    + EA  LF  M   G+ PD   Y TL++G CR  ++  
Sbjct: 698 VTYCTIID-------GYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVER 750

Query: 171 ALRLH----------------------------------KKMVSGDYENGLISKTNIFSY 196
           A+ +                                    +++ G ++     K N  +Y
Sbjct: 751 AITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDR--FGKPNDVTY 808

Query: 197 SIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLD 256
           +I+ID LCKEG ++ AKELF +M+   + P V+  T+L++G+   G   E+  +F E + 
Sbjct: 809 NIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIA 868

Query: 257 LGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDR-----FTYNSLMDGYCLV 311
            G  P+ + ++V+I+   K G   +A  L++ M  +    D       T  +L+ G+  V
Sbjct: 869 AGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKV 928

Query: 312 GRIDTAREIFLSM 324
           G ++ A ++  +M
Sbjct: 929 GEMEVAEKVMENM 941



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 73/302 (24%), Positives = 124/302 (41%), Gaps = 40/302 (13%)

Query: 243 NWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYN 302
           NW +   +  + LD        +F+ +   LC  G   +A  ++E MI+R   P    ++
Sbjct: 85  NWVDSQKVTEQKLD--------SFSFLALDLCNFGSFEKALSVVERMIERNW-PVAEVWS 135

Query: 303 SLMD-GYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIIS 361
           S++      VG+ D                  V + IL +GY     +EEA+ ++   + 
Sbjct: 136 SIVRCSQEFVGKSDDG----------------VLFGILFDGYIAKGYIEEAVFVFSSSMG 179

Query: 362 NGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQE 421
             +   +     LL  L +  +      ++  M   NV  D+ TY++LI   C+   VQ 
Sbjct: 180 LELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQL 239

Query: 422 AVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIH 481
              +    E    EF     N           +D A +L   +  KGLVP   TY ++I 
Sbjct: 240 GKDVLFKTEK---EFRTATLN-----------VDGALKLKESMICKGLVPLKYTYDVLID 285

Query: 482 GLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNL 541
           GLC+  +LE A   L+ M+  G + +  T++ L+ G L+         L+H+M     N+
Sbjct: 286 GLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINI 345

Query: 542 VP 543
            P
Sbjct: 346 KP 347


>gi|18424537|ref|NP_568948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75170898|sp|Q9FIT7.1|PP442_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g61990, mitochondrial; Flags: Precursor
 gi|10176917|dbj|BAB10161.1| unnamed protein product [Arabidopsis thaliana]
 gi|332010163|gb|AED97546.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 974

 Score =  218 bits (556), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 162/576 (28%), Positives = 262/576 (45%), Gaps = 55/576 (9%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CK  I  L +A+     M  +  S    +++LL   + K R+ DA      ++VS G+  
Sbjct: 288 CK--IKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINI 345

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
                +  I C  +KE        +++A  LF  MIA G+ P    Y +LI G+CR  N+
Sbjct: 346 KPYMYDCCI-CVMSKE------GVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNV 398

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
                L   +V     N +IS    ++Y  ++  +C  G +D A  +  EM   G  P V
Sbjct: 399 RQGYEL---LVEMKKRNIVISP---YTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNV 452

Query: 229 VVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLEL 288
           V+ TTLI  F     + +   +  EM + G  P++  +N +I  L K  +++EA   L  
Sbjct: 453 VIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVE 512

Query: 289 MIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILN 348
           M++ GL P+ FTY + + GY       +A +    M   G     V    LIN YCK   
Sbjct: 513 MVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGK 572

Query: 349 VEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNI 408
           V EA S YR ++  G+     TY  L++GLF+  +   A+++F EM+   + PD+ +Y +
Sbjct: 573 VIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGV 632

Query: 409 LIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKG 468
           LI+G  K   +Q+A  +F  +        + I+N L+ G C++G ++ A EL  ++  KG
Sbjct: 633 LINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKG 692

Query: 469 LVPTVVTYSIMIHGLCRKGKLEKANDFLLYME---------------------------- 500
           L P  VTY  +I G C+ G L +A  F L+ E                            
Sbjct: 693 LHPNAVTYCTIIDGYCKSGDLAEA--FRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVER 750

Query: 501 --------KNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEP--ERNLVPDDTTFSI 550
                   K GCA +   FN L++   +  KT    E+L+++ +   +R   P+D T++I
Sbjct: 751 AITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNI 810

Query: 551 VVDLLAKDEKYHECSAVSKSSYRACLYVTIFQPSSL 586
           ++D L K+        +      A L  T+   +SL
Sbjct: 811 MIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSL 846



 Score =  214 bits (546), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 149/521 (28%), Positives = 247/521 (47%), Gaps = 54/521 (10%)

Query: 83  GAVAKNRHYDAVISFY--RKLVSIG--LLPDFLTLNILIN--CFGNKERGLCVENRIKEA 136
           G + + + Y ++I  Y   K V  G  LL +    NI+I+   +G   +G+C    +  A
Sbjct: 377 GLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGA 436

Query: 137 TWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSY 196
             + K MIA G RP+V+ Y TLI  F +      A+R+ K+M     E G+    +IF Y
Sbjct: 437 YNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEM----KEQGI--APDIFCY 490

Query: 197 SIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLD 256
           + +I  L K   +D+A+   +EM   G+ P        I G+  A  +   +    EM +
Sbjct: 491 NSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRE 550

Query: 257 LGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDT 316
            G  PN +    +I+  CK GK+ EA      M+ +G+  D  TY  LM+G     ++D 
Sbjct: 551 CGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDD 610

Query: 317 AREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLS 376
           A EIF  M  KG    V SY +LING+ K+ N+++A S++ +++  G+   VI YN LL 
Sbjct: 611 AEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLG 670

Query: 377 GLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEF 436
           G  ++G+   A++L DEM +  + P+  TY  +IDG CK+  + EA +LF  +++     
Sbjct: 671 GFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVP 730

Query: 437 GIEIFNCLIDGLCKAGRLDNAWELF---------HKLPQKGLV----------------- 470
              ++  L+DG C+   ++ A  +F            P   L+                 
Sbjct: 731 DSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLN 790

Query: 471 ------------PTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGF 518
                       P  VTY+IMI  LC++G LE A +    M+     P V+T+ +L++G+
Sbjct: 791 RLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGY 850

Query: 519 LQNNKTSKVVELLHKMAEP-ERNLVPDDTTFSIVVDLLAKD 558
              +K  +  E+     E     + PD   +S++++   K+
Sbjct: 851 ---DKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKE 888



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 132/491 (26%), Positives = 241/491 (49%), Gaps = 25/491 (5%)

Query: 66  MTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKER 125
           M     +P I  +N L   ++K +  D   SF  ++V  GL P+  T    I+       
Sbjct: 478 MKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFIS------- 530

Query: 126 GLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYEN 185
           G    +    A    K M   GV P+ +    LIN +C+ G +  A   ++ MV    + 
Sbjct: 531 GYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMV----DQ 586

Query: 186 GLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWE 245
           G++      +Y+++++ L K   VD A+E+F EM+G+GI P V     LI+GF   GN +
Sbjct: 587 GILGDAK--TYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQ 644

Query: 246 EVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLM 305
           + + +F EM++ G  PN++ +N+++   C+ G+I +A  LL+ M  +GL+P+  TY +++
Sbjct: 645 KASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTII 704

Query: 306 DGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVR 365
           DGYC  G +  A  +F  M  KG       Y  L++G C++ +VE A++++      G  
Sbjct: 705 DGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIF-GTNKKGCA 763

Query: 366 QTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVE----PDLSTYNILIDGLCKNNCVQE 421
            +   +N L++ +F+ G+     ++ + +   + +    P+  TYNI+ID LCK   ++ 
Sbjct: 764 SSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEA 823

Query: 422 AVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIH 481
           A +LFH ++       +  +  L++G  K GR    + +F +    G+ P  + YS++I+
Sbjct: 824 AKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIIN 883

Query: 482 GLCRKGKLEKA-----NDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAE 536
              ++G   KA       F      +GC  ++ T   L+ GF +  +     +++  M  
Sbjct: 884 AFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVR 943

Query: 537 PERNLVPDDTT 547
            +   +PD  T
Sbjct: 944 LQ--YIPDSAT 952



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 132/493 (26%), Positives = 229/493 (46%), Gaps = 42/493 (8%)

Query: 92  DAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPD 151
           D  +     ++  GL+P   T ++LI+       GLC   R+++A  L   M + GV  D
Sbjct: 259 DGALKLKESMICKGLVPLKYTYDVLID-------GLCKIKRLEDAKSLLVEMDSLGVSLD 311

Query: 152 VITYGTLINGFCRTGNLSVALRLHKKMVS------------------------------- 180
             TY  LI+G  +  N   A  L  +MVS                               
Sbjct: 312 NHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFD 371

Query: 181 GDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCC 240
           G   +GLI +    +Y+ +I+  C+E  V +  EL +EMK R I  +     T++ G C 
Sbjct: 372 GMIASGLIPQAQ--AYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCS 429

Query: 241 AGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFT 300
           +G+ +    +  EM+  G RPN++ +  +I    +  +  +A  +L+ M ++G+ PD F 
Sbjct: 430 SGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFC 489

Query: 301 YNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQII 360
           YNSL+ G     R+D AR   + M   G K    +Y   I+GY +      A    +++ 
Sbjct: 490 YNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMR 549

Query: 361 SNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQ 420
             GV    +    L++   + G+   A   +  M    +  D  TY +L++GL KN+ V 
Sbjct: 550 ECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVD 609

Query: 421 EAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMI 480
           +A ++F  +        +  +  LI+G  K G +  A  +F ++ ++GL P V+ Y++++
Sbjct: 610 DAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLL 669

Query: 481 HGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERN 540
            G CR G++EKA + L  M   G  PN VT+ T++ G+ ++   ++   L  +M    + 
Sbjct: 670 GGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEM--KLKG 727

Query: 541 LVPDDTTFSIVVD 553
           LVPD   ++ +VD
Sbjct: 728 LVPDSFVYTTLVD 740



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 146/568 (25%), Positives = 244/568 (42%), Gaps = 108/568 (19%)

Query: 78  FNLLF-GAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEA 136
           F +LF G +AK    +AV  F   +  + L+P      +L++        L   NR+   
Sbjct: 154 FGILFDGYIAKGYIEEAVFVFSSSM-GLELVPRLSRCKVLLD-------ALLRWNRLDLF 205

Query: 137 TWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSV---------------------ALRLH 175
             ++K M+   V  DV TY  LI   CR GN+ +                     AL+L 
Sbjct: 206 WDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLK 265

Query: 176 KKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLI 235
           + M+      GL+     ++Y ++ID LCK   ++ AK L +EM   G++      + LI
Sbjct: 266 ESMIC----KGLVPLK--YTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLI 319

Query: 236 HGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLN 295
            G     N +   GL  EM+  G       ++  I  + K G + +A  L + MI  GL 
Sbjct: 320 DGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLI 379

Query: 296 PDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSL 355
           P    Y SL++GYC    +    E+ + M  +    +  +Y  ++ G C   +++ A ++
Sbjct: 380 PQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNI 439

Query: 356 YRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCK 415
            +++I++G R  V+ Y TL+    Q  + G A ++  EMK   + PD+  YN LI GL K
Sbjct: 440 VKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSK 499

Query: 416 NNCVQEAVK-LFHMLE----MNKFEFGI-------------------EIFNC-------- 443
              + EA   L  M+E     N F +G                    E+  C        
Sbjct: 500 AKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVL 559

Query: 444 ---LIDGLCKAG-----------------------------------RLDNAWELFHKLP 465
              LI+  CK G                                   ++D+A E+F ++ 
Sbjct: 560 CTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMR 619

Query: 466 QKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTS 525
            KG+ P V +Y ++I+G  + G ++KA+     M + G  PNV+ +N L+ GF ++ +  
Sbjct: 620 GKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIE 679

Query: 526 KVVELLHKMAEPERNLVPDDTTFSIVVD 553
           K  ELL +M+   + L P+  T+  ++D
Sbjct: 680 KAKELLDEMS--VKGLHPNAVTYCTIID 705



 Score =  151 bits (382), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 116/432 (26%), Positives = 191/432 (44%), Gaps = 59/432 (13%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVI---SFY 98
           N F +    SG I  +E      Y+  M+    + +  L  G + +      VI   S Y
Sbjct: 521 NAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAY 580

Query: 99  RKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTL 158
           R +V  G+L D  T  +L+N       GL   +++ +A  +F+ M   G+ PDV +YG L
Sbjct: 581 RSMVDQGILGDAKTYTVLMN-------GLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVL 633

Query: 159 INGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLE 218
           INGF + GN+  A  +  +MV    E GL    N+  Y++++   C+ G ++KAKEL  E
Sbjct: 634 INGFSKLGNMQKASSIFDEMV----EEGLTP--NVIIYNMLLGGFCRSGEIEKAKELLDE 687

Query: 219 MKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGK 278
           M  +G++P  V   T+I G+C +G+  E   LF EM   G  P+   +  ++D  C+   
Sbjct: 688 MSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLND 747

Query: 279 INEA--------------------------------------NGLLELMIQRGLNPDRFT 300
           +  A                                      N L++    R   P+  T
Sbjct: 748 VERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVT 807

Query: 301 YNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQII 360
           YN ++D  C  G ++ A+E+F  M +     TV++Y  L+NGY K+    E   ++ + I
Sbjct: 808 YNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAI 867

Query: 361 SNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPD-----LSTYNILIDGLCK 415
           + G+    I Y+ +++   + G    A  L D+M   N   D     +ST   L+ G  K
Sbjct: 868 AAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAK 927

Query: 416 NNCVQEAVKLFH 427
              ++ A K+  
Sbjct: 928 VGEMEVAEKVME 939



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 117/415 (28%), Positives = 183/415 (44%), Gaps = 60/415 (14%)

Query: 44  FLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVS 103
            ++E CK G   + EA   +  M          ++ +L   + KN   D     +R++  
Sbjct: 563 LINEYCKKG--KVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRG 620

Query: 104 IGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFC 163
            G+ PD  +  +LIN F            +++A+ +F  M+  G+ P+VI Y  L+ GFC
Sbjct: 621 KGIAPDVFSYGVLINGFSKL-------GNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFC 673

Query: 164 RTGNLSVALRLHKKM-VSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGR 222
           R+G +  A  L  +M V G + N +       +Y  IID  CK G + +A  LF EMK +
Sbjct: 674 RSGEIEKAKELLDEMSVKGLHPNAV-------TYCTIIDGYCKSGDLAEAFRLFDEMKLK 726

Query: 223 GINPAVVVCTTLIHGFC------------------CAG---------NW----------- 244
           G+ P   V TTL+ G C                  CA          NW           
Sbjct: 727 GLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKT 786

Query: 245 EEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSL 304
           E +N L     D   +PN +T+N+MID LCK G +  A  L   M    L P   TY SL
Sbjct: 787 EVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSL 846

Query: 305 MDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQI----- 359
           ++GY  +GR      +F    + G +   + Y+++IN + K     +A+ L  Q+     
Sbjct: 847 LNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNA 906

Query: 360 ISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLC 414
           + +G + ++ T   LLSG  + G+   A+K+ + M      PD +T   LI+  C
Sbjct: 907 VDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESC 961



 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 73/302 (24%), Positives = 124/302 (41%), Gaps = 40/302 (13%)

Query: 243 NWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYN 302
           NW +   +  + LD        +F+ +   LC  G   +A  ++E MI+R   P    ++
Sbjct: 85  NWVDSQKVTEQKLD--------SFSFLALDLCNFGSFEKALSVVERMIERNW-PVAEVWS 135

Query: 303 SLMD-GYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIIS 361
           S++      VG+ D                  V + IL +GY     +EEA+ ++   + 
Sbjct: 136 SIVRCSQEFVGKSDDG----------------VLFGILFDGYIAKGYIEEAVFVFSSSMG 179

Query: 362 NGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQE 421
             +   +     LL  L +  +      ++  M   NV  D+ TY++LI   C+   VQ 
Sbjct: 180 LELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQL 239

Query: 422 AVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIH 481
              +    E    EF     N           +D A +L   +  KGLVP   TY ++I 
Sbjct: 240 GKDVLFKTEK---EFRTATLN-----------VDGALKLKESMICKGLVPLKYTYDVLID 285

Query: 482 GLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNL 541
           GLC+  +LE A   L+ M+  G + +  T++ L+ G L+         L+H+M     N+
Sbjct: 286 GLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINI 345

Query: 542 VP 543
            P
Sbjct: 346 KP 347


>gi|296081012|emb|CBI18516.3| unnamed protein product [Vitis vinifera]
          Length = 967

 Score =  218 bits (556), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 160/544 (29%), Positives = 240/544 (44%), Gaps = 74/544 (13%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
           P + + N++  ++ K++  + V S +R++   G+ P+  T NILIN       GLCVE  
Sbjct: 196 PSVYTCNMILASMVKDKRTELVWSLFREMSDKGICPNVGTFNILIN-------GLCVEGN 248

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
           +K+A  L K M   G  P ++TY TL+N +C+ G    A+ L   M+    E       +
Sbjct: 249 LKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMICKGIE------AD 302

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
           + +Y++ ID+LC      KA  L  +M+   I+P  V   TLI+GF   G       +F 
Sbjct: 303 VCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQVFN 362

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLN----------------- 295
           EM      PN +T+N +I   C  G   EA  LL+ M   GL                  
Sbjct: 363 EMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEHGNVTEAMKVYAVM 422

Query: 296 ------PDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNV 349
                  D FT N L+   C  G++  A +    M   G     ++Y+ +INGY  I + 
Sbjct: 423 NCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDP 482

Query: 350 EEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQK-------------------- 389
             A S +  +I  G   +  TY +LL GL + G    A+K                    
Sbjct: 483 LNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTL 542

Query: 390 ---------------LFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKF 434
                          LFD+M   NV PD  TY+ L+ GLC+      AV LF        
Sbjct: 543 LAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGT 602

Query: 435 EFGIEI-FNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKAN 493
            F   + + CL+DGL KAG    A+  F ++ +KG  P  V ++ +I    R+G++ KAN
Sbjct: 603 LFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKAN 662

Query: 494 DFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
           DF   M   G  PN+ T+N L+HGF +     + + L   M      + PD  TF  ++ 
Sbjct: 663 DFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMM--REGIFPDKLTFHSLIL 720

Query: 554 LLAK 557
            L+K
Sbjct: 721 GLSK 724



 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 132/515 (25%), Positives = 238/515 (46%), Gaps = 28/515 (5%)

Query: 55  NLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLN 114
           N+ EA   +  M          + N+L  ++ ++        F   +  IGL+P+ +T +
Sbjct: 411 NVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYD 470

Query: 115 ILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRL 174
            +IN +G+    L        A   F +MI  G  P   TYG+L+ G C+ GNL  A + 
Sbjct: 471 CIINGYGSIGDPL-------NAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKF 523

Query: 175 HKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTL 234
             ++    Y  G +       Y+ ++   CK G + +A  LF +M    + P     ++L
Sbjct: 524 LNRL---HYIPGAVDSV---MYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSL 577

Query: 235 IHGFCCAGNWEEVNGLFIEMLDLGPR-PNLLTFNVMIDCLCKGGKINEANGLLELMIQRG 293
           + G C  G       LF   +  G   PN + +  ++D L K G    A    E M+++G
Sbjct: 578 LTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKG 637

Query: 294 LNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAM 353
             PD   +N+++D     G++  A + F +M   G    + +YNIL++G+ K   +   +
Sbjct: 638 TCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYL 697

Query: 354 SLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYN------------VEP 401
           SLY  ++  G+    +T+++L+ GL ++G      KL  +M +              V P
Sbjct: 698 SLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEESTVVLHEMLENGVIP 757

Query: 402 DLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELF 461
             + Y  LI+G+C+   +Q A KL   +E   F       + ++ GL   G+ ++A  + 
Sbjct: 758 KHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTEDAMLVL 817

Query: 462 HKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQN 521
             + +  L+PT+ T++ ++H  CR  K+ +A      ME  G   +VV +N L+ G   N
Sbjct: 818 DHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVMELCGLKLDVVAYNVLIMGMCAN 877

Query: 522 NKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLA 556
             ++   EL  +M    R+L P+ TT++++VD ++
Sbjct: 878 GDSAAAFELYEEMR--HRDLCPNITTYAVLVDAIS 910



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 121/423 (28%), Positives = 193/423 (45%), Gaps = 60/423 (14%)

Query: 196 YSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEML 255
           + ++I    KEG++D A E F  +   G  P+V  C  ++         E V  LF EM 
Sbjct: 166 FDLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFREMS 225

Query: 256 DLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRID 315
           D G  PN+ TFN++I+ LC  G + +A  LL+ M + G  P   TYN+L++ YC  GR  
Sbjct: 226 DKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYK 285

Query: 316 TAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLL 375
            A E+   M  KG +  V +YN+ I+  C      +A  L +++    +    +TYNTL+
Sbjct: 286 AAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLI 345

Query: 376 SGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLE----- 430
           +G  + G+ G A ++F+EM  +++ P+  TYN LI G C     +EA++L   +E     
Sbjct: 346 NGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLR 405

Query: 431 ----------------MNKFEFGIEIFNC--LIDGLCKAGRLDNAWELFHKLPQKGLVPT 472
                           MN    G + F C  L+  LC+ G+L  A +    + + GLVP 
Sbjct: 406 LNEHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPN 465

Query: 473 VVTYSIMIH-----------------------------------GLCRKGKLEKANDFLL 497
            +TY  +I+                                   GLC+ G L +A  FL 
Sbjct: 466 SITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLN 525

Query: 498 YMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAK 557
            +     A + V +NTL+    ++    + V L  KM   + N++PD  T+S ++  L +
Sbjct: 526 RLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMV--QNNVLPDSYTYSSLLTGLCR 583

Query: 558 DEK 560
             K
Sbjct: 584 KGK 586



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 117/503 (23%), Positives = 219/503 (43%), Gaps = 63/503 (12%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           C+ G   L EA  F  +M+ +   P   +++ +              SF+  ++  G  P
Sbjct: 442 CRDG--KLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHP 499

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
            F T       +G+  +GLC    + EA      +       D + Y TL+   C++GNL
Sbjct: 500 SFFT-------YGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNL 552

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRG-INPA 227
             A+ L  KMV    +N ++  +  ++YS ++  LC++G    A  LF    GRG + P 
Sbjct: 553 HEAVALFDKMV----QNNVLPDS--YTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPN 606

Query: 228 VVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEAN---- 283
            V+ T L+ G   AG+ +     F EM+  G  P+ + FN +ID   + G++ +AN    
Sbjct: 607 HVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFS 666

Query: 284 -------------------------------GLLELMIQRGLNPDRFTYNSLMDGYC--- 309
                                           L   M++ G+ PD+ T++SL+ G     
Sbjct: 667 TMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSG 726

Query: 310 -------LVGRI--DTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQII 360
                  L+G++  + +  +   M   G       Y  LING C++ +++ A  L  ++ 
Sbjct: 727 IPDLGVKLLGKMIMEESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEME 786

Query: 361 SNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQ 420
           + G     +  + ++ GL   G+   A  + D M    + P ++T+  L+   C++  + 
Sbjct: 787 ALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIA 846

Query: 421 EAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMI 480
           EA+KL  ++E+   +  +  +N LI G+C  G    A+EL+ ++  + L P + TY++++
Sbjct: 847 EALKLKGVMELCGLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLV 906

Query: 481 HGLCRKGKLEKANDFLLYMEKNG 503
             +     L +    L  +++ G
Sbjct: 907 DAISAANNLIQGEKLLTDLQERG 929



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 108/435 (24%), Positives = 194/435 (44%), Gaps = 28/435 (6%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CK G  NL EA+ F   + ++  +     +N L     K+ +    ++ + K+V   +LP
Sbjct: 512 CKGG--NLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLP 569

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFG-VRPDVITYGTLINGFCRTGN 167
           D  T + L+        GLC + +   A  LF   +  G + P+ + Y  L++G  + G+
Sbjct: 570 DSYTYSSLLT-------GLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGH 622

Query: 168 LSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPA 227
              A    ++M+    + G    T   +++ IIDS  + G + KA + F  M+  G+ P 
Sbjct: 623 PKAAFYFFEEMM----KKGTCPDT--VAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPN 676

Query: 228 VVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGK--------- 278
           +     L+HGF           L+  M+  G  P+ LTF+ +I  L K G          
Sbjct: 677 LATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLG 736

Query: 279 ---INEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVS 335
              + E+  +L  M++ G+ P    Y +L++G C VG I  A ++   M + G     V+
Sbjct: 737 KMIMEESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVA 796

Query: 336 YNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMK 395
            + ++ G       E+AM +   ++   +  T+ T+ TL+    +  +   A KL   M+
Sbjct: 797 ESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVME 856

Query: 396 LYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLD 455
           L  ++ D+  YN+LI G+C N     A +L+  +        I  +  L+D +  A  L 
Sbjct: 857 LCGLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLVDAISAANNLI 916

Query: 456 NAWELFHKLPQKGLV 470
              +L   L ++GL+
Sbjct: 917 QGEKLLTDLQERGLI 931



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 77/280 (27%), Positives = 135/280 (48%), Gaps = 21/280 (7%)

Query: 273 LCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHT 332
           L K    + A  +L  + Q G+   +  + +LMD Y L   I +                
Sbjct: 122 LVKARMYDSAKSILRHLCQMGIG-SKSIFGALMDTYPLCNSIPSV--------------- 165

Query: 333 VVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFD 392
              +++LI  Y K   ++ A+  +  +   G + +V T N +L+ + +  +      LF 
Sbjct: 166 ---FDLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFR 222

Query: 393 EMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAG 452
           EM    + P++ T+NILI+GLC    +++A  L   +E N F   I  +N L++  CK G
Sbjct: 223 EMSDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKG 282

Query: 453 RLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFN 512
           R   A EL   +  KG+   V TY++ I  LC   +  KA   L  M K   +PN VT+N
Sbjct: 283 RYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYN 342

Query: 513 TLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVV 552
           TL++GF++  K     ++ ++M++ +  L P+  T++ ++
Sbjct: 343 TLINGFVKEGKIGVAAQVFNEMSKFD--LSPNCVTYNALI 380


>gi|255555533|ref|XP_002518803.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223542184|gb|EEF43728.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 775

 Score =  218 bits (556), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 157/531 (29%), Positives = 267/531 (50%), Gaps = 26/531 (4%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
           N FL+   K+G  +L+    FF  M     +  + ++N++ G + K        S + ++
Sbjct: 221 NAFLYRLAKTGKGDLSNK--FFRDMVGAGIAQSVFTYNIMIGYMCKEGDMVTAKSLFHQM 278

Query: 102 VSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLING 161
             +GL PD +T N LI+ +G  + GL     + E+  LF+ M   G  PDVITY  LIN 
Sbjct: 279 KQMGLTPDIVTYNSLIDGYG--KLGL-----LDESFCLFEEMKDVGCEPDVITYNALINC 331

Query: 162 FCRTGNLSVALR-LHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMK 220
           FC+   +  A   LH+   SG        K N+ +YS +ID+LCKE ++ +A +  L+M+
Sbjct: 332 FCKYEQMPKAFHFLHEMKNSG-------LKPNVVTYSTLIDALCKEHMLQQAIKFLLDMR 384

Query: 221 GRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKIN 280
             G++P     T+LI   C AG   +   L  EML +    N++T+  ++D LCK G++ 
Sbjct: 385 RVGLSPNEFTYTSLIDANCKAGYLSDALKLADEMLQVQVGFNVVTYTTLLDGLCKEGRMM 444

Query: 281 EANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILI 340
           EA  L   MI+ G+ P+  TY +L+ G+    R++ A E+   +  K  K  ++ Y  +I
Sbjct: 445 EAEDLFRAMIKAGVTPNLKTYTALVHGHIKNKRVENALELLKEIKEKKIKPDLLLYGTII 504

Query: 341 NGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVE 400
            G C    +EE   +  ++ + G+R   + Y   +   F+ G+   A  L  EM    VE
Sbjct: 505 WGLCSQNKLEECEFVMSEMKACGIRANSVIYTIRMDAYFKTGKTVEALNLLQEMCDLGVE 564

Query: 401 PDLSTYNILIDGLCKNNCVQEAVKLF-HMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWE 459
             + T+ +LIDGLCK   V+EA+  F  M + N     + +   LIDGLCK   ++ A +
Sbjct: 565 VTIVTFCVLIDGLCKKGLVEEAIDYFARMADFNLQPNNVAVCTALIDGLCKNNYIEAAKK 624

Query: 460 LFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFL 519
           LF ++  K +VP  + Y+ +I G  +    ++A +    M + G   ++  + +L+ G  
Sbjct: 625 LFDEMQDKNMVPDKIAYTALIDGNLKHKDFQEALNIRSRMSELGMELDLHAYTSLVWGLS 684

Query: 520 QNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKS 570
           Q N   +    L++M    + +VPD+    + + LL    KY+E  ++ ++
Sbjct: 685 QGNLVQQARMFLNEMI--GKGIVPDEI---LCIRLL---RKYYELGSIDEA 727



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 136/467 (29%), Positives = 221/467 (47%), Gaps = 44/467 (9%)

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
           ++EA   F  M  F V P   +    +    +TG   ++ +  + MV      G     +
Sbjct: 198 LEEAGQCFSRMTRFRVFPKARSCNAFLYRLAKTGKGDLSNKFFRDMV------GAGIAQS 251

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
           +F+Y+I+I  +CKEG +  AK LF +MK  G+ P +V   +LI G+   G  +E   LF 
Sbjct: 252 VFTYNIMIGYMCKEGDMVTAKSLFHQMKQMGLTPDIVTYNSLIDGYGKLGLLDESFCLFE 311

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
           EM D+G  P+++T+N +I+C CK  ++ +A   L  M   GL P+  TY++L+D  C   
Sbjct: 312 EMKDVGCEPDVITYNALINCFCKYEQMPKAFHFLHEMKNSGLKPNVVTYSTLIDALCKEH 371

Query: 313 RIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYN 372
            +  A +  L M   G      +Y  LI+  CK   + +A+ L  +++   V   V+TY 
Sbjct: 372 MLQQAIKFLLDMRRVGLSPNEFTYTSLIDANCKAGYLSDALKLADEMLQVQVGFNVVTYT 431

Query: 373 TLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVK-------- 424
           TLL GL + G+   A+ LF  M    V P+L TY  L+ G  KN  V+ A++        
Sbjct: 432 TLLDGLCKEGRMMEAEDLFRAMIKAGVTPNLKTYTALVHGHIKNKRVENALELLKEIKEK 491

Query: 425 ------------LFHMLEMNKFE-----------FGIE----IFNCLIDGLCKAGRLDNA 457
                       ++ +   NK E            GI     I+   +D   K G+   A
Sbjct: 492 KIKPDLLLYGTIIWGLCSQNKLEECEFVMSEMKACGIRANSVIYTIRMDAYFKTGKTVEA 551

Query: 458 WELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNT-LMH 516
             L  ++   G+  T+VT+ ++I GLC+KG +E+A D+   M      PN V   T L+ 
Sbjct: 552 LNLLQEMCDLGVEVTIVTFCVLIDGLCKKGLVEEAIDYFARMADFNLQPNNVAVCTALID 611

Query: 517 GFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
           G  +NN      +L  +M   ++N+VPD   ++ ++D   K + + E
Sbjct: 612 GLCKNNYIEAAKKLFDEMQ--DKNMVPDKIAYTALIDGNLKHKDFQE 656



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 97/328 (29%), Positives = 173/328 (52%)

Query: 207 GLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTF 266
           G++++A + F  M    + P    C   ++     G  +  N  F +M+  G   ++ T+
Sbjct: 196 GMLEEAGQCFSRMTRFRVFPKARSCNAFLYRLAKTGKGDLSNKFFRDMVGAGIAQSVFTY 255

Query: 267 NVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHS 326
           N+MI  +CK G +  A  L   M Q GL PD  TYNSL+DGY  +G +D +  +F  M  
Sbjct: 256 NIMIGYMCKEGDMVTAKSLFHQMKQMGLTPDIVTYNSLIDGYGKLGLLDESFCLFEEMKD 315

Query: 327 KGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGY 386
            GC+  V++YN LIN +CK   + +A     ++ ++G++  V+TY+TL+  L +      
Sbjct: 316 VGCEPDVITYNALINCFCKYEQMPKAFHFLHEMKNSGLKPNVVTYSTLIDALCKEHMLQQ 375

Query: 387 AQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLID 446
           A K   +M+   + P+  TY  LID  CK   + +A+KL   +   +  F +  +  L+D
Sbjct: 376 AIKFLLDMRRVGLSPNEFTYTSLIDANCKAGYLSDALKLADEMLQVQVGFNVVTYTTLLD 435

Query: 447 GLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAP 506
           GLCK GR+  A +LF  + + G+ P + TY+ ++HG  +  ++E A + L  +++    P
Sbjct: 436 GLCKEGRMMEAEDLFRAMIKAGVTPNLKTYTALVHGHIKNKRVENALELLKEIKEKKIKP 495

Query: 507 NVVTFNTLMHGFLQNNKTSKVVELLHKM 534
           +++ + T++ G    NK  +   ++ +M
Sbjct: 496 DLLLYGTIIWGLCSQNKLEECEFVMSEM 523



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 135/512 (26%), Positives = 227/512 (44%), Gaps = 37/512 (7%)

Query: 10  LFSSETVSKVKLSSLFKSPRQIAAVSSPETQLNEFLHENCKSGIINLNEARYFFGYMTHM 69
           L+      K  LS+ F      A ++      N  +   CK G  ++  A+  F  M  M
Sbjct: 224 LYRLAKTGKGDLSNKFFRDMVGAGIAQSVFTYNIMIGYMCKEG--DMVTAKSLFHQMKQM 281

Query: 70  QPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKER---- 125
             +P I ++N L     K    D     + ++  +G  PD +T N LINCF   E+    
Sbjct: 282 GLTPDIVTYNSLIDGYGKLGLLDESFCLFEEMKDVGCEPDVITYNALINCFCKYEQMPKA 341

Query: 126 ------------------------GLCVENRIKEATWLFKNMIAFGVRPDVITYGTLING 161
                                    LC E+ +++A     +M   G+ P+  TY +LI+ 
Sbjct: 342 FHFLHEMKNSGLKPNVVTYSTLIDALCKEHMLQQAIKFLLDMRRVGLSPNEFTYTSLIDA 401

Query: 162 FCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKG 221
            C+ G LS AL+L  +M+    + G     N+ +Y+ ++D LCKEG + +A++LF  M  
Sbjct: 402 NCKAGYLSDALKLADEMLQ--VQVGF----NVVTYTTLLDGLCKEGRMMEAEDLFRAMIK 455

Query: 222 RGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINE 281
            G+ P +   T L+HG       E    L  E+ +   +P+LL +  +I  LC   K+ E
Sbjct: 456 AGVTPNLKTYTALVHGHIKNKRVENALELLKEIKEKKIKPDLLLYGTIIWGLCSQNKLEE 515

Query: 282 ANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILIN 341
              ++  M   G+  +   Y   MD Y   G+   A  +   M   G + T+V++ +LI+
Sbjct: 516 CEFVMSEMKACGIRANSVIYTIRMDAYFKTGKTVEALNLLQEMCDLGVEVTIVTFCVLID 575

Query: 342 GYCKILNVEEAMSLYRQIISNGVR-QTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVE 400
           G CK   VEEA+  + ++    ++   V     L+ GL +      A+KLFDEM+  N+ 
Sbjct: 576 GLCKKGLVEEAIDYFARMADFNLQPNNVAVCTALIDGLCKNNYIEAAKKLFDEMQDKNMV 635

Query: 401 PDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWEL 460
           PD   Y  LIDG  K+   QEA+ +   +     E  +  +  L+ GL +   +  A   
Sbjct: 636 PDKIAYTALIDGNLKHKDFQEALNIRSRMSELGMELDLHAYTSLVWGLSQGNLVQQARMF 695

Query: 461 FHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKA 492
            +++  KG+VP  +    ++      G +++A
Sbjct: 696 LNEMIGKGIVPDEILCIRLLRKYYELGSIDEA 727



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 82/315 (26%), Positives = 141/315 (44%), Gaps = 16/315 (5%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CK G   + EA   F  M     +P + ++  L     KN+  +  +   +++    + P
Sbjct: 438 CKEG--RMMEAEDLFRAMIKAGVTPNLKTYTALVHGHIKNKRVENALELLKEIKEKKIKP 495

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           D L    +I        GLC +N+++E  ++   M A G+R + + Y   ++ + +TG  
Sbjct: 496 DLLLYGTII-------WGLCSQNKLEECEFVMSEMKACGIRANSVIYTIRMDAYFKTGKT 548

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPA- 227
             AL L ++M        L  +  I ++ ++ID LCK+GLV++A + F  M    + P  
Sbjct: 549 VEALNLLQEMCD------LGVEVTIVTFCVLIDGLCKKGLVEEAIDYFARMADFNLQPNN 602

Query: 228 VVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLE 287
           V VCT LI G C     E    LF EM D    P+ + +  +ID   K     EA  +  
Sbjct: 603 VAVCTALIDGLCKNNYIEAAKKLFDEMQDKNMVPDKIAYTALIDGNLKHKDFQEALNIRS 662

Query: 288 LMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKIL 347
            M + G+  D   Y SL+ G      +  AR     M  KG     +    L+  Y ++ 
Sbjct: 663 RMSELGMELDLHAYTSLVWGLSQGNLVQQARMFLNEMIGKGIVPDEILCIRLLRKYYELG 722

Query: 348 NVEEAMSLYRQIISN 362
           +++EA+ L+ +++  
Sbjct: 723 SIDEAIELHDELLKK 737



 Score = 98.6 bits (244), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 92/364 (25%), Positives = 150/364 (41%), Gaps = 18/364 (4%)

Query: 33  AVSSPETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYD 92
            +S  E      +  NCK+G   L++A      M  +Q    + ++  L   + K     
Sbjct: 387 GLSPNEFTYTSLIDANCKAGY--LSDALKLADEMLQVQVGFNVVTYTTLLDGLCKEGRMM 444

Query: 93  AVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDV 152
                +R ++  G+ P+  T   L++       G     R++ A  L K +    ++PD+
Sbjct: 445 EAEDLFRAMIKAGVTPNLKTYTALVH-------GHIKNKRVENALELLKEIKEKKIKPDL 497

Query: 153 ITYGTLINGFCRTGNLSVALRLHKKMVS-GDYENGLISKTNIFSYSIIIDSLCKEGLVDK 211
           + YGT+I G C    L     +  +M + G   N +I       Y+I +D+  K G   +
Sbjct: 498 LLYGTIIWGLCSQNKLEECEFVMSEMKACGIRANSVI-------YTIRMDAYFKTGKTVE 550

Query: 212 AKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPN-LLTFNVMI 270
           A  L  EM   G+   +V    LI G C  G  EE    F  M D   +PN +     +I
Sbjct: 551 ALNLLQEMCDLGVEVTIVTFCVLIDGLCKKGLVEEAIDYFARMADFNLQPNNVAVCTALI 610

Query: 271 DCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCK 330
           D LCK   I  A  L + M  + + PD+  Y +L+DG         A  I   M   G +
Sbjct: 611 DGLCKNNYIEAAKKLFDEMQDKNMVPDKIAYTALIDGNLKHKDFQEALNIRSRMSELGME 670

Query: 331 HTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKL 390
             + +Y  L+ G  +   V++A     ++I  G+    I    LL   ++ G    A +L
Sbjct: 671 LDLHAYTSLVWGLSQGNLVQQARMFLNEMIGKGIVPDEILCIRLLRKYYELGSIDEAIEL 730

Query: 391 FDEM 394
            DE+
Sbjct: 731 HDEL 734



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 50/191 (26%), Positives = 88/191 (46%), Gaps = 14/191 (7%)

Query: 75  ISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTL-NILINCFGNKERGLCVENRI 133
           I +F +L   + K    +  I ++ ++    L P+ + +   LI+       GLC  N I
Sbjct: 567 IVTFCVLIDGLCKKGLVEEAIDYFARMADFNLQPNNVAVCTALID-------GLCKNNYI 619

Query: 134 KEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNI 193
           + A  LF  M    + PD I Y  LI+G  +  +   AL +  +M      + L  + ++
Sbjct: 620 EAAKKLFDEMQDKNMVPDKIAYTALIDGNLKHKDFQEALNIRSRM------SELGMELDL 673

Query: 194 FSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIE 253
            +Y+ ++  L +  LV +A+    EM G+GI P  ++C  L+  +   G+ +E   L  E
Sbjct: 674 HAYTSLVWGLSQGNLVQQARMFLNEMIGKGIVPDEILCIRLLRKYYELGSIDEAIELHDE 733

Query: 254 MLDLGPRPNLL 264
           +L   P   LL
Sbjct: 734 LLKKVPLDELL 744


>gi|224125710|ref|XP_002319656.1| predicted protein [Populus trichocarpa]
 gi|222858032|gb|EEE95579.1| predicted protein [Populus trichocarpa]
          Length = 487

 Score =  218 bits (555), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 128/439 (29%), Positives = 223/439 (50%), Gaps = 15/439 (3%)

Query: 55  NLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLN 114
           N+++A    G +      P + ++N +     K    ++  +   ++   G  PD +T N
Sbjct: 25  NIDKATRVMGIL-EKHGKPDVFAYNAVISGFCKANRIESAKTVLDRMKRKGFSPDVVTHN 83

Query: 115 ILINCFGNKERGLCVENRIKEATWLFKNMIAFG-VRPDVITYGTLINGFCRTGNLSVALR 173
           I+I  F       C + +I  A  +F+ ++     +P +ITY  LI  +   G +  AL+
Sbjct: 84  IMIGTF-------CGKGKIDLALKVFEELLKDNNCKPTLITYTILIEAYILEGGIDEALK 136

Query: 174 LHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTT 233
           L  +M+S   E       + F+Y++I   LCKEG VD+A E    +  RG  P V+    
Sbjct: 137 LLDEMLSRGLE------PDTFTYNVITRGLCKEGKVDRAFEFVRTLNSRGCKPDVITYNI 190

Query: 234 LIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRG 293
           L+      G W+E      E+   G  PN++T++++I  LC+ GKI E+  L+++M ++G
Sbjct: 191 LLRALLNQGKWDEGEKWMSEIFSRGCEPNVVTYSILISSLCRDGKIEESVNLVKVMKEKG 250

Query: 294 LNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAM 353
           L PD + Y+ L+  +C  G++D A E    M   G    +V+YN ++   CK  N + A+
Sbjct: 251 LTPDAYCYDPLIAAFCREGKLDMAIEFLDCMICDGFLPDIVNYNTIMAALCKNGNGDHAV 310

Query: 354 SLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGL 413
            ++ ++   G    V +YNT+LS L+ +G    A  +  +M    ++PD+ TYN LI  L
Sbjct: 311 EIFGKLDEVGCPPNVSSYNTMLSALWSSGDRYRALGMISQMLSKGIDPDVITYNSLISCL 370

Query: 414 CKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTV 473
           C++  V EA+ L   +   +F+  I  +  ++ GLCKA R+D+A E+   + + G  P  
Sbjct: 371 CRDGMVDEAIGLLADMLSGRFQPNIVSYKTVLLGLCKAHRIDDAIEVLAAMIENGCQPNE 430

Query: 474 VTYSIMIHGLCRKGKLEKA 492
            TY+++I G+   G   +A
Sbjct: 431 TTYTLLIEGIGFSGSRTQA 449



 Score =  201 bits (511), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 133/447 (29%), Positives = 217/447 (48%), Gaps = 45/447 (10%)

Query: 143 MIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDS 202
           M+A   +PDVI    LI GF  + N+  A R     V G  E     K ++F+Y+ +I  
Sbjct: 1   MVAKDYQPDVILCTKLIKGFFNSRNIDKATR-----VMGILEKH--GKPDVFAYNAVISG 53

Query: 203 LCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEML-DLGPRP 261
            CK   ++ AK +   MK +G +P VV    +I  FC  G  +    +F E+L D   +P
Sbjct: 54  FCKANRIESAKTVLDRMKRKGFSPDVVTHNIMIGTFCGKGKIDLALKVFEELLKDNNCKP 113

Query: 262 NLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIF 321
            L+T+ ++I+     G I+EA  LL+ M+ RGL PD FTYN +  G C  G++D A E  
Sbjct: 114 TLITYTILIEAYILEGGIDEALKLLDEMLSRGLEPDTFTYNVITRGLCKEGKVDRAFEFV 173

Query: 322 LSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQA 381
            +++S+GCK  V++YNIL+         +E      +I S G    V+TY+ L+S L + 
Sbjct: 174 RTLNSRGCKPDVITYNILLRALLNQGKWDEGEKWMSEIFSRGCEPNVVTYSILISSLCRD 233

Query: 382 GQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIF 441
           G+   +  L   MK   + PD   Y+ LI   C+   +  A++    +  + F   I  +
Sbjct: 234 GKIEESVNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLDCMICDGFLPDIVNY 293

Query: 442 NCLIDGLCKAGRLDNAWELFHKLPQ----------------------------------- 466
           N ++  LCK G  D+A E+F KL +                                   
Sbjct: 294 NTIMAALCKNGNGDHAVEIFGKLDEVGCPPNVSSYNTMLSALWSSGDRYRALGMISQMLS 353

Query: 467 KGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSK 526
           KG+ P V+TY+ +I  LCR G +++A   L  M      PN+V++ T++ G  + ++   
Sbjct: 354 KGIDPDVITYNSLISCLCRDGMVDEAIGLLADMLSGRFQPNIVSYKTVLLGLCKAHRIDD 413

Query: 527 VVELLHKMAEPERNLVPDDTTFSIVVD 553
            +E+L  M   E    P++TT++++++
Sbjct: 414 AIEVLAAMI--ENGCQPNETTYTLLIE 438



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 96/344 (27%), Positives = 161/344 (46%), Gaps = 13/344 (3%)

Query: 56  LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNI 115
           ++EA      M      P   ++N++   + K    D    F R L S G  PD +T NI
Sbjct: 131 IDEALKLLDEMLSRGLEPDTFTYNVITRGLCKEGKVDRAFEFVRTLNSRGCKPDVITYNI 190

Query: 116 LINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLH 175
           L+       R L  + +  E       + + G  P+V+TY  LI+  CR G +  ++ L 
Sbjct: 191 LL-------RALLNQGKWDEGEKWMSEIFSRGCEPNVVTYSILISSLCRDGKIEESVNLV 243

Query: 176 KKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLI 235
           K M     E GL    + + Y  +I + C+EG +D A E    M   G  P +V   T++
Sbjct: 244 KVM----KEKGLTP--DAYCYDPLIAAFCREGKLDMAIEFLDCMICDGFLPDIVNYNTIM 297

Query: 236 HGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLN 295
              C  GN +    +F ++ ++G  PN+ ++N M+  L   G    A G++  M+ +G++
Sbjct: 298 AALCKNGNGDHAVEIFGKLDEVGCPPNVSSYNTMLSALWSSGDRYRALGMISQMLSKGID 357

Query: 296 PDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSL 355
           PD  TYNSL+   C  G +D A  +   M S   +  +VSY  ++ G CK   +++A+ +
Sbjct: 358 PDVITYNSLISCLCRDGMVDEAIGLLADMLSGRFQPNIVSYKTVLLGLCKAHRIDDAIEV 417

Query: 356 YRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNV 399
              +I NG +    TY  L+ G+  +G    A +L + + + N 
Sbjct: 418 LAAMIENGCQPNETTYTLLIEGIGFSGSRTQAMELANSLYIMNA 461


>gi|356540349|ref|XP_003538652.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Glycine max]
          Length = 1024

 Score =  218 bits (555), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 145/480 (30%), Positives = 227/480 (47%), Gaps = 23/480 (4%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
           P    FN L  A  K+R Y      ++K++  G  P +L  NI I    + E  L   + 
Sbjct: 340 PNREMFNSLVHAYCKSRDYSYAYKLFKKMIKCGCQPGYLLYNIFIGSICSNEE-LPGSDL 398

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
           ++ A   +  M+  GV  + +         C  G    A  +  +M+S     G +   +
Sbjct: 399 LELAEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDKAFEIICEMMS----KGFVPDDS 454

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
             +YS +I  LC    V+KA  LF EMK  GI P+V   T LI  FC AG  ++    F 
Sbjct: 455 --TYSKVIGFLCDASKVEKAFLLFEEMKKNGIVPSVYTYTILIDSFCKAGLIQQARNWFD 512

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
           EML     PN++T+  +I    K  K+ +AN L E+M+  G  P+  TY +L+DG+C  G
Sbjct: 513 EMLRDNCTPNVVTYTSLIHAYLKARKVFDANKLFEMMLLEGSKPNVVTYTALIDGHCKAG 572

Query: 313 RIDTAREIFLSMH---------------SKGCKH-TVVSYNILINGYCKILNVEEAMSLY 356
           +ID A +I+  M                   C+   +++Y  L++G CK   VEEA  L 
Sbjct: 573 QIDKACQIYARMQGDIESSDIDMYFKLDDNDCETPNIITYGALVDGLCKANRVEEAHELL 632

Query: 357 RQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKN 416
             +  NG     I Y+ L+ G  + G+   AQ++F +M      P+L TY+ LI+ L K 
Sbjct: 633 DTMSVNGCEPNQIVYDALIDGFCKTGKLENAQEVFVKMSERGYCPNLYTYSSLINSLFKE 692

Query: 417 NCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTY 476
             +   +K+   +  N     + I+  +IDGLCK G+ + A+ L  K+ + G  P V+TY
Sbjct: 693 KRLDLVLKVLSKMLENSCTPNVVIYTDMIDGLCKVGKTEEAYRLMLKMEEVGCYPNVITY 752

Query: 477 SIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAE 536
           + MI G  + GK+E+  +    M   GCAPN +T+  L++         +   LL +M +
Sbjct: 753 TAMIDGFGKIGKIEQCLELYRDMCSKGCAPNFITYRVLINHCCSTGLLDEAHRLLDEMKQ 812



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 145/516 (28%), Positives = 242/516 (46%), Gaps = 72/516 (13%)

Query: 106 LLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLING---- 161
            +PD +  N +++       GLC  +  +EA  +   M +    P+V+TY  L++G    
Sbjct: 268 FVPDTVFYNRMVS-------GLCEASLFQEAMDILDRMRSISCIPNVVTYRILLSGCLGK 320

Query: 162 -------------------------------FCRTGNLSVALRLHKKMVSGDYENGLISK 190
                                          +C++ + S A +L KKM+    + G +  
Sbjct: 321 GQLGRCKRILSMMMTEGCYPNREMFNSLVHAYCKSRDYSYAYKLFKKMIKCGCQPGYL-- 378

Query: 191 TNIFSYSIIIDSLCK------EGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNW 244
                Y+I I S+C         L++ A++ + EM   G+    V  +      C AG +
Sbjct: 379 ----LYNIFIGSICSNEELPGSDLLELAEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKF 434

Query: 245 EEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSL 304
           ++   +  EM+  G  P+  T++ +I  LC   K+ +A  L E M + G+ P  +TY  L
Sbjct: 435 DKAFEIICEMMSKGFVPDDSTYSKVIGFLCDASKVEKAFLLFEEMKKNGIVPSVYTYTIL 494

Query: 305 MDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGV 364
           +D +C  G I  AR  F  M    C   VV+Y  LI+ Y K   V +A  L+  ++  G 
Sbjct: 495 IDSFCKAGLIQQARNWFDEMLRDNCTPNVVTYTSLIHAYLKARKVFDANKLFEMMLLEGS 554

Query: 365 RQTVITYNTLLSGLFQAGQAGYAQKLFDEM-------------KLYNVE---PDLSTYNI 408
           +  V+TY  L+ G  +AGQ   A +++  M             KL + +   P++ TY  
Sbjct: 555 KPNVVTYTALIDGHCKAGQIDKACQIYARMQGDIESSDIDMYFKLDDNDCETPNIITYGA 614

Query: 409 LIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKG 468
           L+DGLCK N V+EA +L   + +N  E    +++ LIDG CK G+L+NA E+F K+ ++G
Sbjct: 615 LVDGLCKANRVEEAHELLDTMSVNGCEPNQIVYDALIDGFCKTGKLENAQEVFVKMSERG 674

Query: 469 LVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVV 528
             P + TYS +I+ L ++ +L+     L  M +N C PNVV +  ++ G  +  KT +  
Sbjct: 675 YCPNLYTYSSLINSLFKEKRLDLVLKVLSKMLENSCTPNVVIYTDMIDGLCKVGKTEEAY 734

Query: 529 ELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHEC 564
            L+ KM E      P+  T++ ++D   K  K  +C
Sbjct: 735 RLMLKMEEV--GCYPNVITYTAMIDGFGKIGKIEQC 768



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 129/471 (27%), Positives = 221/471 (46%), Gaps = 23/471 (4%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
           P + ++ +L  +  K        +++ +++     P+ +T   LI+ +    +       
Sbjct: 486 PSVYTYTILIDSFCKAGLIQQARNWFDEMLRDNCTPNVVTYTSLIHAYLKARK------- 538

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLIS--- 189
           + +A  LF+ M+  G +P+V+TY  LI+G C+ G +  A +++ +M  GD E+  I    
Sbjct: 539 VFDANKLFEMMLLEGSKPNVVTYTALIDGHCKAGQIDKACQIYARM-QGDIESSDIDMYF 597

Query: 190 --------KTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCA 241
                     NI +Y  ++D LCK   V++A EL   M   G  P  +V   LI GFC  
Sbjct: 598 KLDDNDCETPNIITYGALVDGLCKANRVEEAHELLDTMSVNGCEPNQIVYDALIDGFCKT 657

Query: 242 GNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTY 301
           G  E    +F++M + G  PNL T++ +I+ L K  +++    +L  M++    P+   Y
Sbjct: 658 GKLENAQEVFVKMSERGYCPNLYTYSSLINSLFKEKRLDLVLKVLSKMLENSCTPNVVIY 717

Query: 302 NSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIIS 361
             ++DG C VG+ + A  + L M   GC   V++Y  +I+G+ KI  +E+ + LYR + S
Sbjct: 718 TDMIDGLCKVGKTEEAYRLMLKMEEVGCYPNVITYTAMIDGFGKIGKIEQCLELYRDMCS 777

Query: 362 NGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQE 421
            G     ITY  L++     G    A +L DEMK       +S+Y  +I+G   N     
Sbjct: 778 KGCAPNFITYRVLINHCCSTGLLDEAHRLLDEMKQTYWPRHISSYRKIIEGF--NREFIT 835

Query: 422 AVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKG--LVPTVVTYSIM 479
           ++ L   L  N+      ++  LID   KAGRL+ A  L  ++       V     Y+ +
Sbjct: 836 SIGLLDELSENESVPVESLYRILIDNFIKAGRLEGALNLLEEISSSPSLAVANKYLYTSL 895

Query: 480 IHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVEL 530
           I  L    K++KA +    M      P + TF  L+ G  +  K  + ++L
Sbjct: 896 IESLSHASKVDKAFELYASMINKNVVPELSTFVHLIKGLTRVGKWQEALQL 946



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 123/508 (24%), Positives = 209/508 (41%), Gaps = 105/508 (20%)

Query: 146 FGVRPDVITYGTLINGFCRTGNLSVALRLHKKMV-SGDYENGLISKTNIFSYSIIIDSLC 204
           FG +    TY  LI  F R   L  A  +H++M  SG   +G       F+YS+     C
Sbjct: 199 FGYKASPTTYNALIQVFLRADKLDTAFLVHREMSNSGFRMDG--CTLGCFAYSLCKAGRC 256

Query: 205 KEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLL 264
            + L    KE F+        P  V    ++ G C A  ++E   +   M  +   PN++
Sbjct: 257 GDALSLLEKEEFV--------PDTVFYNRMVSGLCEASLFQEAMDILDRMRSISCIPNVV 308

Query: 265 TFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSM 324
           T+ +++      G++     +L +M+  G  P+R  +NSL+  YC       A ++F  M
Sbjct: 309 TYRILLSGCLGKGQLGRCKRILSMMMTEGCYPNREMFNSLVHAYCKSRDYSYAYKLFKKM 368

Query: 325 HSKGCKHTVVSYNILINGYCK-------------------------ILN----------- 348
              GC+   + YNI I   C                          +LN           
Sbjct: 369 IKCGCQPGYLLYNIFIGSICSNEELPGSDLLELAEKAYSEMLDLGVVLNKVNVSNFARCL 428

Query: 349 -----VEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDL 403
                 ++A  +  +++S G      TY+ ++  L  A +   A  LF+EMK   + P +
Sbjct: 429 CGAGKFDKAFEIICEMMSKGFVPDDSTYSKVIGFLCDASKVEKAFLLFEEMKKNGIVPSV 488

Query: 404 STYNILIDGLCKNNCVQEAV-----------------------------------KLFHM 428
            TY ILID  CK   +Q+A                                    KLF M
Sbjct: 489 YTYTILIDSFCKAGLIQQARNWFDEMLRDNCTPNVVTYTSLIHAYLKARKVFDANKLFEM 548

Query: 429 LEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLP----------------QKGLVPT 472
           + +   +  +  +  LIDG CKAG++D A +++ ++                      P 
Sbjct: 549 MLLEGSKPNVVTYTALIDGHCKAGQIDKACQIYARMQGDIESSDIDMYFKLDDNDCETPN 608

Query: 473 VVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLH 532
           ++TY  ++ GLC+  ++E+A++ L  M  NGC PN + ++ L+ GF +  K     E+  
Sbjct: 609 IITYGALVDGLCKANRVEEAHELLDTMSVNGCEPNQIVYDALIDGFCKTGKLENAQEVFV 668

Query: 533 KMAEPERNLVPDDTTFSIVVDLLAKDEK 560
           KM+  ER   P+  T+S +++ L K+++
Sbjct: 669 KMS--ERGYCPNLYTYSSLINSLFKEKR 694



 Score =  125 bits (314), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 99/398 (24%), Positives = 172/398 (43%), Gaps = 46/398 (11%)

Query: 197 SIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLD 256
           + +I   C+ G+ + A E    +K  G   +      LI  F  A   +    +  EM +
Sbjct: 174 NFLIQKCCRNGMWNVALEELGRLKDFGYKASPTTYNALIQVFLRADKLDTAFLVHREMSN 233

Query: 257 LGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDT 316
            G R +  T       LCK G+  +A  LLE   +    PD   YN ++ G C       
Sbjct: 234 SGFRMDGCTLGCFAYSLCKAGRCGDALSLLE---KEEFVPDTVFYNRMVSGLCEASLFQE 290

Query: 317 AREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLS 376
           A +I   M S  C   VV+Y IL++G      +     +   +++ G       +N+L+ 
Sbjct: 291 AMDILDRMRSISCIPNVVTYRILLSGCLGKGQLGRCKRILSMMMTEGCYPNREMFNSLVH 350

Query: 377 GLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKN------NCVQEAVKLF-HML 429
              ++    YA KLF +M     +P    YNI I  +C N      + ++ A K +  ML
Sbjct: 351 AYCKSRDYSYAYKLFKKMIKCGCQPGYLLYNIFIGSICSNEELPGSDLLELAEKAYSEML 410

Query: 430 EM-------------------NKFEFGIEI---------------FNCLIDGLCKAGRLD 455
           ++                    KF+   EI               ++ +I  LC A +++
Sbjct: 411 DLGVVLNKVNVSNFARCLCGAGKFDKAFEIICEMMSKGFVPDDSTYSKVIGFLCDASKVE 470

Query: 456 NAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLM 515
            A+ LF ++ + G+VP+V TY+I+I   C+ G +++A ++   M ++ C PNVVT+ +L+
Sbjct: 471 KAFLLFEEMKKNGIVPSVYTYTILIDSFCKAGLIQQARNWFDEMLRDNCTPNVVTYTSLI 530

Query: 516 HGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
           H +L+  K     +L   M        P+  T++ ++D
Sbjct: 531 HAYLKARKVFDANKLFEMMLLEGSK--PNVVTYTALID 566



 Score = 82.0 bits (201), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 66/252 (26%), Positives = 105/252 (41%), Gaps = 20/252 (7%)

Query: 283 NGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILING 342
           N L+EL+    +N DR ++  LM         D  RE+   +            N LI  
Sbjct: 137 NALIELLCCNAVNNDRVSHKFLMQIR------DDDRELLRKL-----------LNFLIQK 179

Query: 343 YCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPD 402
            C+      A+    ++   G + +  TYN L+    +A +   A  +  EM       D
Sbjct: 180 CCRNGMWNVALEELGRLKDFGYKASPTTYNALIQVFLRADKLDTAFLVHREMSNSGFRMD 239

Query: 403 LSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFH 462
             T       LCK     +A+ L   LE  +F      +N ++ GLC+A     A ++  
Sbjct: 240 GCTLGCFAYSLCKAGRCGDALSL---LEKEEFVPDTVFYNRMVSGLCEASLFQEAMDILD 296

Query: 463 KLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNN 522
           ++     +P VVTY I++ G   KG+L +    L  M   GC PN   FN+L+H + ++ 
Sbjct: 297 RMRSISCIPNVVTYRILLSGCLGKGQLGRCKRILSMMMTEGCYPNREMFNSLVHAYCKSR 356

Query: 523 KTSKVVELLHKM 534
             S   +L  KM
Sbjct: 357 DYSYAYKLFKKM 368



 Score = 72.4 bits (176), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 67/255 (26%), Positives = 99/255 (38%), Gaps = 8/255 (3%)

Query: 310 LVGRIDTAREIFLSMHSK-GCKHTVVSYNILINGYC--KILNVEEAMSLYRQIISNGVRQ 366
           LV   +   E FL    + G  HT V YN LI   C   + N   +     QI  +    
Sbjct: 109 LVKHPEFCVEFFLWASRQIGYSHTPVVYNALIELLCCNAVNNDRVSHKFLMQIRDDDREL 168

Query: 367 TVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLF 426
                N L+    + G    A +    +K +  +   +TYN LI    + + +  A  + 
Sbjct: 169 LRKLLNFLIQKCCRNGMWNVALEELGRLKDFGYKASPTTYNALIQVFLRADKLDTAFLVH 228

Query: 427 HMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRK 486
             +  + F        C    LCKAGR  +A  L  K   +  VP  V Y+ M+ GLC  
Sbjct: 229 REMSNSGFRMDGCTLGCFAYSLCKAGRCGDALSLLEK---EEFVPDTVFYNRMVSGLCEA 285

Query: 487 GKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDT 546
              ++A D L  M    C PNVVT+  L+ G L   +  +   +L  M        P+  
Sbjct: 286 SLFQEAMDILDRMRSISCIPNVVTYRILLSGCLGKGQLGRCKRILSMMM--TEGCYPNRE 343

Query: 547 TFSIVVDLLAKDEKY 561
            F+ +V    K   Y
Sbjct: 344 MFNSLVHAYCKSRDY 358


>gi|14532710|gb|AAK64156.1| unknown protein [Arabidopsis thaliana]
          Length = 974

 Score =  218 bits (555), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 162/576 (28%), Positives = 262/576 (45%), Gaps = 55/576 (9%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CK  I  L +A+     M  +  S    +++LL   + K R+ DA      ++VS G+  
Sbjct: 288 CK--IKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINI 345

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
                +  I C  +KE        +++A  LF  MIA G+ P    Y +LI G+CR  N+
Sbjct: 346 KPYMYDCCI-CVMSKE------GVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNV 398

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
                L   +V     N +IS    ++Y  ++  +C  G +D A  +  EM   G  P V
Sbjct: 399 RQGYEL---LVEMKKRNIVISP---YTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNV 452

Query: 229 VVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLEL 288
           V+ TTLI  F     + +   +  EM + G  P++  +N +I  L K  +++EA   L  
Sbjct: 453 VIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVE 512

Query: 289 MIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILN 348
           M++ GL P+ FTY + + GY       +A +    M   G     V    LIN YCK   
Sbjct: 513 MVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGK 572

Query: 349 VEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNI 408
           V EA S YR ++  G+     TY  L++GLF+  +   A+++F EM+   + PD+ +Y +
Sbjct: 573 VIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGV 632

Query: 409 LIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKG 468
           LI+G  K   +Q+A  +F  +        + I+N L+ G C++G ++ A EL  ++  KG
Sbjct: 633 LINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKG 692

Query: 469 LVPTVVTYSIMIHGLCRKGKLEKANDFLLYME---------------------------- 500
           L P  VTY  +I G C+ G L +A  F L+ E                            
Sbjct: 693 LHPNAVTYCTIIDGYCKSGDLAEA--FRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVER 750

Query: 501 --------KNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEP--ERNLVPDDTTFSI 550
                   K GCA +   FN L++   +  KT    E+L+++ +   +R   P+D T++I
Sbjct: 751 AITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNI 810

Query: 551 VVDLLAKDEKYHECSAVSKSSYRACLYVTIFQPSSL 586
           ++D L K+        +      A L  T+   +SL
Sbjct: 811 MIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSL 846



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 149/521 (28%), Positives = 247/521 (47%), Gaps = 54/521 (10%)

Query: 83  GAVAKNRHYDAVISFY--RKLVSIG--LLPDFLTLNILIN--CFGNKERGLCVENRIKEA 136
           G + + + Y ++I  Y   K V  G  LL +    NI+I+   +G   +G+C    +  A
Sbjct: 377 GLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGA 436

Query: 137 TWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSY 196
             + K MIA G RP+V+ Y TLI  F +      A+R+ K+M     E G+    +IF Y
Sbjct: 437 YNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEM----KEQGI--APDIFCY 490

Query: 197 SIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLD 256
           + +I  L K   +D+A+   +EM   G+ P        I G+  A  +   +    EM +
Sbjct: 491 NSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRE 550

Query: 257 LGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDT 316
            G  PN +    +I+  CK GK+ EA      M+ +G+  D  TY  LM+G     ++D 
Sbjct: 551 CGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDD 610

Query: 317 AREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLS 376
           A EIF  M  KG    V SY +LING+ K+ N+++A S++ +++  G+   VI YN LL 
Sbjct: 611 AEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLG 670

Query: 377 GLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEF 436
           G  ++G+   A++L DEM +  + P+  TY  +IDG CK+  + EA +LF  +++     
Sbjct: 671 GFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVP 730

Query: 437 GIEIFNCLIDGLCKAGRLDNAWELF---------HKLPQKGLV----------------- 470
              ++  L+DG C+   ++ A  +F            P   L+                 
Sbjct: 731 DSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLN 790

Query: 471 ------------PTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGF 518
                       P  VTY+IMI  LC++G LE A +    M+     P V+T+ +L++G+
Sbjct: 791 RLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGY 850

Query: 519 LQNNKTSKVVELLHKMAEP-ERNLVPDDTTFSIVVDLLAKD 558
              +K  +  E+     E     + PD   +S++++   K+
Sbjct: 851 ---DKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKE 888



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 132/491 (26%), Positives = 241/491 (49%), Gaps = 25/491 (5%)

Query: 66  MTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKER 125
           M     +P I  +N L   ++K +  D   SF  ++V  GL P+  T    I+       
Sbjct: 478 MKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFIS------- 530

Query: 126 GLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYEN 185
           G    +    A    K M   GV P+ +    LIN +C+ G +  A   ++ MV    + 
Sbjct: 531 GYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMV----DQ 586

Query: 186 GLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWE 245
           G++      +Y+++++ L K   VD A+E+F EM+G+GI P V     LI+GF   GN +
Sbjct: 587 GILGDAK--TYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQ 644

Query: 246 EVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLM 305
           + + +F EM++ G  PN++ +N+++   C+ G+I +A  LL+ M  +GL+P+  TY +++
Sbjct: 645 KASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTII 704

Query: 306 DGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVR 365
           DGYC  G +  A  +F  M  KG       Y  L++G C++ +VE A++++      G  
Sbjct: 705 DGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIF-GTNKKGCA 763

Query: 366 QTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVE----PDLSTYNILIDGLCKNNCVQE 421
            +   +N L++ +F+ G+     ++ + +   + +    P+  TYNI+ID LCK   ++ 
Sbjct: 764 SSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEA 823

Query: 422 AVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIH 481
           A +LFH ++       +  +  L++G  K GR    + +F +    G+ P  + YS++I+
Sbjct: 824 AKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIIN 883

Query: 482 GLCRKGKLEKA-----NDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAE 536
              ++G   KA       F      +GC  ++ T   L+ GF +  +     +++  M  
Sbjct: 884 AFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVR 943

Query: 537 PERNLVPDDTT 547
            +   +PD  T
Sbjct: 944 LQ--YIPDSAT 952



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 132/493 (26%), Positives = 229/493 (46%), Gaps = 42/493 (8%)

Query: 92  DAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPD 151
           D  +     ++  GL+P   T ++LI+       GLC   R+++A  L   M + GV  D
Sbjct: 259 DGALKLKESMICKGLVPLKYTYDVLID-------GLCKIKRLEDAKSLLVEMDSLGVSLD 311

Query: 152 VITYGTLINGFCRTGNLSVALRLHKKMVS------------------------------- 180
             TY  LI+G  +  N   A  L  +MVS                               
Sbjct: 312 NHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFD 371

Query: 181 GDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCC 240
           G   +GLI +    +Y+ +I+  C+E  V +  EL +EMK R I  +     T++ G C 
Sbjct: 372 GMIASGLIPQAQ--AYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCS 429

Query: 241 AGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFT 300
           +G+ +    +  EM+  G RPN++ +  +I    +  +  +A  +L+ M ++G+ PD F 
Sbjct: 430 SGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFC 489

Query: 301 YNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQII 360
           YNSL+ G     R+D AR   + M   G K    +Y   I+GY +      A    +++ 
Sbjct: 490 YNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMR 549

Query: 361 SNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQ 420
             GV    +    L++   + G+   A   +  M    +  D  TY +L++GL KN+ V 
Sbjct: 550 ECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVD 609

Query: 421 EAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMI 480
           +A ++F  +        +  +  LI+G  K G +  A  +F ++ ++GL P V+ Y++++
Sbjct: 610 DAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLL 669

Query: 481 HGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERN 540
            G CR G++EKA + L  M   G  PN VT+ T++ G+ ++   ++   L  +M    + 
Sbjct: 670 GGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEM--KLKG 727

Query: 541 LVPDDTTFSIVVD 553
           LVPD   ++ +VD
Sbjct: 728 LVPDSFVYTTLVD 740



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 146/568 (25%), Positives = 244/568 (42%), Gaps = 108/568 (19%)

Query: 78  FNLLF-GAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEA 136
           F +LF G +AK    +AV  F   +  + L+P      +L++        L   NR+   
Sbjct: 154 FGILFDGYIAKEYIEEAVFVFSSSM-GLELVPRLSRCKVLLD-------ALLRWNRLDLF 205

Query: 137 TWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSV---------------------ALRLH 175
             ++K M+   V  DV TY  LI   CR GN+ +                     AL+L 
Sbjct: 206 WDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLK 265

Query: 176 KKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLI 235
           + M+      GL+     ++Y ++ID LCK   ++ AK L +EM   G++      + LI
Sbjct: 266 ESMIC----KGLVPLK--YTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLI 319

Query: 236 HGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLN 295
            G     N +   GL  EM+  G       ++  I  + K G + +A  L + MI  GL 
Sbjct: 320 DGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLI 379

Query: 296 PDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSL 355
           P    Y SL++GYC    +    E+ + M  +    +  +Y  ++ G C   +++ A ++
Sbjct: 380 PQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNI 439

Query: 356 YRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCK 415
            +++I++G R  V+ Y TL+    Q  + G A ++  EMK   + PD+  YN LI GL K
Sbjct: 440 VKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSK 499

Query: 416 NNCVQEAVK-LFHMLE----MNKFEFGI-------------------EIFNC-------- 443
              + EA   L  M+E     N F +G                    E+  C        
Sbjct: 500 AKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVL 559

Query: 444 ---LIDGLCKAG-----------------------------------RLDNAWELFHKLP 465
              LI+  CK G                                   ++D+A E+F ++ 
Sbjct: 560 CTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMR 619

Query: 466 QKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTS 525
            KG+ P V +Y ++I+G  + G ++KA+     M + G  PNV+ +N L+ GF ++ +  
Sbjct: 620 GKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIE 679

Query: 526 KVVELLHKMAEPERNLVPDDTTFSIVVD 553
           K  ELL +M+   + L P+  T+  ++D
Sbjct: 680 KAKELLDEMS--VKGLHPNAVTYCTIID 705



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 116/432 (26%), Positives = 191/432 (44%), Gaps = 59/432 (13%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVI---SFY 98
           N F +    SG I  +E      Y+  M+    + +  L  G + +      VI   S Y
Sbjct: 521 NAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAY 580

Query: 99  RKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTL 158
           R +V  G+L D  T  +L+N       GL   +++ +A  +F+ M   G+ PDV +YG L
Sbjct: 581 RSMVDQGILGDAKTYTVLMN-------GLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVL 633

Query: 159 INGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLE 218
           INGF + GN+  A  +  +MV    E GL    N+  Y++++   C+ G ++KAKEL  E
Sbjct: 634 INGFSKLGNMQKASSIFDEMV----EEGLTP--NVIIYNMLLGGFCRSGEIEKAKELLDE 687

Query: 219 MKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGK 278
           M  +G++P  V   T+I G+C +G+  E   LF EM   G  P+   +  ++D  C+   
Sbjct: 688 MSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLND 747

Query: 279 INEA--------------------------------------NGLLELMIQRGLNPDRFT 300
           +  A                                      N L++    R   P+  T
Sbjct: 748 VERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVT 807

Query: 301 YNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQII 360
           YN ++D  C  G ++ A+E+F  M +     TV++Y  L+NGY K+    E   ++ + I
Sbjct: 808 YNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAI 867

Query: 361 SNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPD-----LSTYNILIDGLCK 415
           + G+    I Y+ +++   + G    A  L D+M   N   D     +ST   L+ G  K
Sbjct: 868 AAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAK 927

Query: 416 NNCVQEAVKLFH 427
              ++ A K+  
Sbjct: 928 VGEMEVAEKVME 939



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 117/415 (28%), Positives = 183/415 (44%), Gaps = 60/415 (14%)

Query: 44  FLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVS 103
            ++E CK G   + EA   +  M          ++ +L   + KN   D     +R++  
Sbjct: 563 LINEYCKKG--KVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRG 620

Query: 104 IGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFC 163
            G+ PD  +  +LIN F            +++A+ +F  M+  G+ P+VI Y  L+ GFC
Sbjct: 621 KGIAPDVFSYGVLINGFSKL-------GNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFC 673

Query: 164 RTGNLSVALRLHKKM-VSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGR 222
           R+G +  A  L  +M V G + N +       +Y  IID  CK G + +A  LF EMK +
Sbjct: 674 RSGEIEKAKELLDEMSVKGLHPNAV-------TYCTIIDGYCKSGDLAEAFRLFDEMKLK 726

Query: 223 GINPAVVVCTTLIHGFC------------------CAG---------NW----------- 244
           G+ P   V TTL+ G C                  CA          NW           
Sbjct: 727 GLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKT 786

Query: 245 EEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSL 304
           E +N L     D   +PN +T+N+MID LCK G +  A  L   M    L P   TY SL
Sbjct: 787 EVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSL 846

Query: 305 MDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQI----- 359
           ++GY  +GR      +F    + G +   + Y+++IN + K     +A+ L  Q+     
Sbjct: 847 LNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNA 906

Query: 360 ISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLC 414
           + +G + ++ T   LLSG  + G+   A+K+ + M      PD +T   LI+  C
Sbjct: 907 VDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESC 961



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 73/302 (24%), Positives = 124/302 (41%), Gaps = 40/302 (13%)

Query: 243 NWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYN 302
           NW +   +  + LD        +F+ +   LC  G   +A  ++E MI+R   P    ++
Sbjct: 85  NWVDSQKVTEQKLD--------SFSFLALDLCNFGSFEKALSVVERMIERNW-PVAEVWS 135

Query: 303 SLMD-GYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIIS 361
           S++      VG+ D                  V + IL +GY     +EEA+ ++   + 
Sbjct: 136 SIVRCSQEFVGKSDDG----------------VLFGILFDGYIAKEYIEEAVFVFSSSMG 179

Query: 362 NGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQE 421
             +   +     LL  L +  +      ++  M   NV  D+ TY++LI   C+   VQ 
Sbjct: 180 LELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQL 239

Query: 422 AVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIH 481
              +    E    EF     N           +D A +L   +  KGLVP   TY ++I 
Sbjct: 240 GKDVLFKTEK---EFRTATLN-----------VDGALKLKESMICKGLVPLKYTYDVLID 285

Query: 482 GLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNL 541
           GLC+  +LE A   L+ M+  G + +  T++ L+ G L+         L+H+M     N+
Sbjct: 286 GLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINI 345

Query: 542 VP 543
            P
Sbjct: 346 KP 347


>gi|357455187|ref|XP_003597874.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|124359582|gb|ABD28711.2| Tetratricopeptide-like helical [Medicago truncatula]
 gi|355486922|gb|AES68125.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 822

 Score =  218 bits (555), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 132/469 (28%), Positives = 235/469 (50%), Gaps = 39/469 (8%)

Query: 105 GLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCR 164
           G +P+ +  N++I+       G C +  +K AT +F+ +   G  P + TYG LI+GFC+
Sbjct: 235 GCVPNVVFYNVIID-------GYCKKGDLKRATRVFEELKLKGFLPTLETYGALIDGFCK 287

Query: 165 TGN---------------LSVALRLHKKMVSGDYENGLISKT--------------NIFS 195
            G                L+V +++   ++   Y+ GL+ K               +I +
Sbjct: 288 AGKFQVVDQLLNEMNVMGLNVNVKVFNSIIDAKYKYGLVDKAAEMMRMMTEMGCEPDITT 347

Query: 196 YSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEML 255
           Y+I+I+  C  G + +A+E     K R + P     T L+H +C  G++   + +  ++ 
Sbjct: 348 YNILINFSCSGGRIKEAEEFLERAKERTLLPNKFSYTPLMHAYCKQGDYVMASDMLFKIA 407

Query: 256 DLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRID 315
           + G +P+L+++   I     GG+I+ A  + E M+++G+ PD   YN LM G C  GR  
Sbjct: 408 ETGDKPDLVSYGAFIHGSVAGGEIDVALMVREKMMEKGVFPDAQIYNVLMSGLCKKGRFP 467

Query: 316 TAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLL 375
            A+ +   M     +     Y  L++G+ +   +++A  L+  ++S G+   V+ YN ++
Sbjct: 468 AAKLLLSEMLDLNLQPDAYMYATLVDGFIRNNELDKATELFEVVMSKGIDPGVVGYNVMI 527

Query: 376 SGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFE 435
            GL + G+   A    ++MK+ N  PD  T++ +IDG  K + +  A+K+F  +   K++
Sbjct: 528 KGLCKCGKMTDAVSYVNKMKIANHAPDEYTHSTVIDGYVKQHDLDSALKMFGQMMKQKYK 587

Query: 436 FGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDF 495
             +  +  LI+G CK   +  A ++F  +    L P VVTY+I+I G  + GK EKA  F
Sbjct: 588 PNVVAYTSLINGFCKIADMSRAEKVFRAMQSFNLEPNVVTYTILIGGFSKTGKPEKAASF 647

Query: 496 LLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPD 544
              M  N C PN  TF+ L++G      T+ ++E   K  E +R+L+ D
Sbjct: 648 FELMLMNNCLPNDTTFHYLINGLTNITNTTLLIE---KNEENDRSLILD 693



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 127/460 (27%), Positives = 218/460 (47%), Gaps = 27/460 (5%)

Query: 41  LNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRK 100
            N  +    K G+++  +A      MT M   P I+++N+L               F  +
Sbjct: 313 FNSIIDAKYKYGLVD--KAAEMMRMMTEMGCEPDITTYNILINFSCSGGRIKEAEEFLER 370

Query: 101 LVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLIN 160
                LLP+  +   L++ +       C +     A+ +   +   G +PD+++YG  I+
Sbjct: 371 AKERTLLPNKFSYTPLMHAY-------CKQGDYVMASDMLFKIAETGDKPDLVSYGAFIH 423

Query: 161 GFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMK 220
           G    G + VAL + +KM+    E G+     I  Y++++  LCK+G    AK L  EM 
Sbjct: 424 GSVAGGEIDVALMVREKMM----EKGVFPDAQI--YNVLMSGLCKKGRFPAAKLLLSEML 477

Query: 221 GRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKIN 280
              + P   +  TL+ GF      ++   LF  ++  G  P ++ +NVMI  LCK GK+ 
Sbjct: 478 DLNLQPDAYMYATLVDGFIRNNELDKATELFEVVMSKGIDPGVVGYNVMIKGLCKCGKMT 537

Query: 281 EANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILI 340
           +A   +  M      PD +T+++++DGY     +D+A ++F  M  +  K  VV+Y  LI
Sbjct: 538 DAVSYVNKMKIANHAPDEYTHSTVIDGYVKQHDLDSALKMFGQMMKQKYKPNVVAYTSLI 597

Query: 341 NGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVE 400
           NG+CKI ++  A  ++R + S  +   V+TY  L+ G  + G+   A   F+ M + N  
Sbjct: 598 NGFCKIADMSRAEKVFRAMQSFNLEPNVVTYTILIGGFSKTGKPEKAASFFELMLMNNCL 657

Query: 401 PDLSTYNILIDGLC------------KNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGL 448
           P+ +T++ LI+GL             + N     +  F  +    +   I  +N +I  L
Sbjct: 658 PNDTTFHYLINGLTNITNTTLLIEKNEENDRSLILDFFATMISEGWSQVIATYNSIIVCL 717

Query: 449 CKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGK 488
           CK G +D A  L  K+ +KG +   V +S ++HGLC+ GK
Sbjct: 718 CKHGMVDTAQLLQTKMLRKGFLMDSVCFSALLHGLCQTGK 757



 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 136/525 (25%), Positives = 237/525 (45%), Gaps = 47/525 (8%)

Query: 53  IINLNEARYFFGYMTHMQPSPPIS--SFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDF 110
           I N     YFF + + +  S P++  +++ L   + K R +  +      + +    P  
Sbjct: 69  IHNPQHGLYFFHWASTLPFSSPLNNVAYSSLLKLMVKYRLFSEIEIVLEDMKNRNFKPTL 128

Query: 111 LTLNILINCFGNKERGLCVENRIKEATWLFKNMIA-FGVRPDVITYGTLINGFCRTGNLS 169
             LN +I  +   E G      + +A  +F  +   +   P V+   +L+N   + G + 
Sbjct: 129 EALNSVICVYA--EYGF-----VDKAVKMFYMVCELYNCFPCVVANNSLLNCLVKNGKVD 181

Query: 170 VALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVV 229
           VA  L+ KM+    ++GL    + +S  I++  LC  G V++ ++L  +  G G  P VV
Sbjct: 182 VACELYDKMLERGGDHGLDLVVDNYSIVIVVKGLCDVGKVEEGRKLIDDRWGNGCVPNVV 241

Query: 230 VCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELM 289
               +I G+C  G+ +    +F E+   G  P L T+  +ID  CK GK    + LL  M
Sbjct: 242 FYNVIIDGYCKKGDLKRATRVFEELKLKGFLPTLETYGALIDGFCKAGKFQVVDQLLNEM 301

Query: 290 IQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILIN-------- 341
              GLN +   +NS++D     G +D A E+   M   GC+  + +YNILIN        
Sbjct: 302 NVMGLNVNVKVFNSIIDAKYKYGLVDKAAEMMRMMTEMGCEPDITTYNILINFSCSGGRI 361

Query: 342 ---------------------------GYCKILNVEEAMSLYRQIISNGVRQTVITYNTL 374
                                       YCK  +   A  +  +I   G +  +++Y   
Sbjct: 362 KEAEEFLERAKERTLLPNKFSYTPLMHAYCKQGDYVMASDMLFKIAETGDKPDLVSYGAF 421

Query: 375 LSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEA-VKLFHMLEMNK 433
           + G    G+   A  + ++M    V PD   YN+L+ GLCK      A + L  ML++N 
Sbjct: 422 IHGSVAGGEIDVALMVREKMMEKGVFPDAQIYNVLMSGLCKKGRFPAAKLLLSEMLDLN- 480

Query: 434 FEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKAN 493
            +    ++  L+DG  +   LD A ELF  +  KG+ P VV Y++MI GLC+ GK+  A 
Sbjct: 481 LQPDAYMYATLVDGFIRNNELDKATELFEVVMSKGIDPGVVGYNVMIKGLCKCGKMTDAV 540

Query: 494 DFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPE 538
            ++  M+    AP+  T +T++ G+++ +     +++  +M + +
Sbjct: 541 SYVNKMKIANHAPDEYTHSTVIDGYVKQHDLDSALKMFGQMMKQK 585



 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 94/380 (24%), Positives = 190/380 (50%), Gaps = 9/380 (2%)

Query: 189 SKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVN 248
           S  N  +YS ++  + K  L  + + +  +MK R   P +    ++I  +   G  ++  
Sbjct: 89  SPLNNVAYSSLLKLMVKYRLFSEIEIVLEDMKNRNFKPTLEALNSVICVYAEYGFVDKAV 148

Query: 249 GLFIEMLDL-GPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRG------LNPDRFTY 301
            +F  + +L    P ++  N +++CL K GK++ A  L + M++RG      L  D ++ 
Sbjct: 149 KMFYMVCELYNCFPCVVANNSLLNCLVKNGKVDVACELYDKMLERGGDHGLDLVVDNYSI 208

Query: 302 NSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIIS 361
             ++ G C VG+++  R++       GC   VV YN++I+GYCK  +++ A  ++ ++  
Sbjct: 209 VIVVKGLCDVGKVEEGRKLIDDRWGNGCVPNVVFYNVIIDGYCKKGDLKRATRVFEELKL 268

Query: 362 NGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQE 421
            G   T+ TY  L+ G  +AG+     +L +EM +  +  ++  +N +ID   K   V +
Sbjct: 269 KGFLPTLETYGALIDGFCKAGKFQVVDQLLNEMNVMGLNVNVKVFNSIIDAKYKYGLVDK 328

Query: 422 AVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIH 481
           A ++  M+     E  I  +N LI+  C  GR+  A E   +  ++ L+P   +Y+ ++H
Sbjct: 329 AAEMMRMMTEMGCEPDITTYNILINFSCSGGRIKEAEEFLERAKERTLLPNKFSYTPLMH 388

Query: 482 GLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNL 541
             C++G    A+D L  + + G  P++V++   +HG +   +    + +  KM   E+ +
Sbjct: 389 AYCKQGDYVMASDMLFKIAETGDKPDLVSYGAFIHGSVAGGEIDVALMVREKMM--EKGV 446

Query: 542 VPDDTTFSIVVDLLAKDEKY 561
            PD   +++++  L K  ++
Sbjct: 447 FPDAQIYNVLMSGLCKKGRF 466



 Score =  118 bits (296), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 81/324 (25%), Positives = 149/324 (45%), Gaps = 25/324 (7%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
           P    +N+L   + K   + A      +++ + L PD      L++       G    N 
Sbjct: 448 PDAQIYNVLMSGLCKKGRFPAAKLLLSEMLDLNLQPDAYMYATLVD-------GFIRNNE 500

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
           + +AT LF+ +++ G+ P V+ Y  +I G C+ G ++ A+    KM   ++        +
Sbjct: 501 LDKATELFEVVMSKGIDPGVVGYNVMIKGLCKCGKMTDAVSYVNKMKIANH------APD 554

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
            +++S +ID   K+  +D A ++F +M  +   P VV  T+LI+GFC   +      +F 
Sbjct: 555 EYTHSTVIDGYVKQHDLDSALKMFGQMMKQKYKPNVVAYTSLINGFCKIADMSRAEKVFR 614

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
            M      PN++T+ ++I    K GK  +A    ELM+     P+  T++ L++G   + 
Sbjct: 615 AMQSFNLEPNVVTYTILIGGFSKTGKPEKAASFFELMLMNNCLPNDTTFHYLINGLTNIT 674

Query: 313 R----IDTARE--------IFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQII 360
                I+   E         F +M S+G    + +YN +I   CK   V+ A  L  +++
Sbjct: 675 NTTLLIEKNEENDRSLILDFFATMISEGWSQVIATYNSIIVCLCKHGMVDTAQLLQTKML 734

Query: 361 SNGVRQTVITYNTLLSGLFQAGQA 384
             G     + ++ LL GL Q G++
Sbjct: 735 RKGFLMDSVCFSALLHGLCQTGKS 758



 Score = 95.5 bits (236), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 81/355 (22%), Positives = 142/355 (40%), Gaps = 63/355 (17%)

Query: 37  PETQL-NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVI 95
           P+ Q+ N  +   CK G      A+     M  +   P    +  L     +N   D   
Sbjct: 448 PDAQIYNVLMSGLCKKG--RFPAAKLLLSEMLDLNLQPDAYMYATLVDGFIRNNELDKAT 505

Query: 96  SFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITY 155
             +  ++S G+ P  +  N++I       +GLC   ++ +A      M      PD  T+
Sbjct: 506 ELFEVVMSKGIDPGVVGYNVMI-------KGLCKCGKMTDAVSYVNKMKIANHAPDEYTH 558

Query: 156 GTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKEL 215
            T+I+G+ +  +L  AL++  +M+   Y      K N+ +Y+ +I+  CK   + +A+++
Sbjct: 559 STVIDGYVKQHDLDSALKMFGQMMKQKY------KPNVVAYTSLINGFCKIADMSRAEKV 612

Query: 216 FLEMKGRGINPAVVVCTTLIHGFCCAGNWEE-----------------------VNGL-- 250
           F  M+   + P VV  T LI GF   G  E+                       +NGL  
Sbjct: 613 FRAMQSFNLEPNVVTYTILIGGFSKTGKPEKAASFFELMLMNNCLPNDTTFHYLINGLTN 672

Query: 251 ----------------------FIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLEL 288
                                 F  M+  G    + T+N +I CLCK G ++ A  L   
Sbjct: 673 ITNTTLLIEKNEENDRSLILDFFATMISEGWSQVIATYNSIIVCLCKHGMVDTAQLLQTK 732

Query: 289 MIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGY 343
           M+++G   D   +++L+ G C  G+    R I     +K    T   Y++ ++ Y
Sbjct: 733 MLRKGFLMDSVCFSALLHGLCQTGKSKEWRNIISGDLTKIDFQTAFEYSLKLDKY 787


>gi|449443698|ref|XP_004139614.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Cucumis sativus]
          Length = 732

 Score =  218 bits (555), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 147/483 (30%), Positives = 236/483 (48%), Gaps = 33/483 (6%)

Query: 66  MTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKER 125
           MT     P    +  L  A+++       +    ++  +G +PD  T N +I+       
Sbjct: 244 MTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDVIH------- 296

Query: 126 GLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKK-------- 177
           GLC  N+I +AT L   M+  G  PD +TYG L++G CR G L+ A ++  K        
Sbjct: 297 GLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKILIKIPCPNNAI 356

Query: 178 ---MVSGDYENGLISKT---------------NIFSYSIIIDSLCKEGLVDKAKELFLEM 219
              +++G   +G + +                +IF+Y+I++  LCKEG +  A++L  EM
Sbjct: 357 LNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEM 416

Query: 220 KGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKI 279
             RG  P V+    L++G C AG  EE   +  EM   G   N + +N +I  LC+  K+
Sbjct: 417 SRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKV 476

Query: 280 NEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNIL 339
           + A  LL  M  +G  PD FTYNSL+ G C V RID A  +F +M   G     V+YN L
Sbjct: 477 HVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTL 536

Query: 340 INGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNV 399
           I+   +    ++A++L   ++  G     ITYN L+    + G      +L+++M +  +
Sbjct: 537 IHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGL 596

Query: 400 EPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWE 459
             D  + NI+I+GLCK   V  A +         F   I  +N +++GLCK GR+  A  
Sbjct: 597 GADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALN 656

Query: 460 LFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFL 519
           LF +L  +G+ P   TY+  I   C++G +  A  F     +NG  P+ +T+N L++  L
Sbjct: 657 LFDRLQVEGVRPDAFTYNTFISWQCKEGMVNDACLFFYRGIENGFVPSNLTWNVLVYTLL 716

Query: 520 QNN 522
           + +
Sbjct: 717 KQS 719



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 145/524 (27%), Positives = 243/524 (46%), Gaps = 57/524 (10%)

Query: 72  SPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVEN 131
            P   S++L+   +          + +  ++S G+ P   T  I++       + LC+ N
Sbjct: 180 EPTFKSYDLVLEILVTGNCPQVATNVFYDMLSKGVSPTVFTFGIVM-------KALCMFN 232

Query: 132 RIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKM-VSGDYENGLISK 190
            +  A  L ++M   G  P+ I Y TLI+   +   +S AL+L ++M V G         
Sbjct: 233 EVDSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMG-------CM 285

Query: 191 TNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGL 250
            ++ +++ +I  LCK   +  A +L   M  RG  P  +    L+HG C  G   E   +
Sbjct: 286 PDVQTFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKI 345

Query: 251 FIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLL-ELMIQRGLNPDRFTYNSLMDGYC 309
            I++    P PN    N +I+     G++ EA   L E MI  G  PD FTYN LM G C
Sbjct: 346 LIKI----PCPNNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLC 401

Query: 310 LVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVI 369
             G +  AR++   M  +GC+  V++Y IL+NG CK   +EEA  +  ++ + G+    +
Sbjct: 402 KEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSV 461

Query: 370 TYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFH-- 427
            YN L+  L +  +   A  L  EM     +PDL TYN LI GLCK + + EA +LFH  
Sbjct: 462 IYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNM 521

Query: 428 ------------------MLEMNKFEFGIEI---------------FNCLIDGLCKAGRL 454
                             +L    F+  + +               +N LI   CK G +
Sbjct: 522 LLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNI 581

Query: 455 DNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTL 514
           +   EL+ ++   GL    ++ +IMI+GLC+ GK++ A +FL      G  P++VT+N++
Sbjct: 582 EKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSV 641

Query: 515 MHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKD 558
           ++G  +  +  + + L  ++      + PD  T++  +    K+
Sbjct: 642 LNGLCKVGRIKEALNLFDRLQ--VEGVRPDAFTYNTFISWQCKE 683



 Score =  184 bits (468), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 136/423 (32%), Positives = 198/423 (46%), Gaps = 22/423 (5%)

Query: 44  FLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRK-LV 102
            LH  C+ G   LNEAR     +    P P  +  N L      +       SF  + ++
Sbjct: 329 LLHGLCRIG--KLNEARKILIKI----PCPNNAILNTLINGYVMSGQLKEAQSFLNETMI 382

Query: 103 SIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGF 162
           + G  PD  T NIL++       GLC E  +  A  L   M   G  P+VITY  L+NG 
Sbjct: 383 NFGFQPDIFTYNILMH-------GLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGL 435

Query: 163 CRTGNLSVA-LRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKG 221
           C+ G L  A L LH+    G   N +I       Y+ +I +LC++  V  A  L  EM  
Sbjct: 436 CKAGLLEEAGLVLHEMSARGLTINSVI-------YNCLICALCRKEKVHVALNLLSEMCT 488

Query: 222 RGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINE 281
           +G  P +    +LI+G C     +E   LF  ML  G   N +T+N +I  L + G   +
Sbjct: 489 KGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQK 548

Query: 282 ANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILIN 341
           A  L+  M+ RG   D+ TYN L+  +C VG I+   E++  M   G     +S NI+IN
Sbjct: 549 ALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMIN 608

Query: 342 GYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEP 401
           G CK+  V+ A    R  I+ G    ++TYN++L+GL + G+   A  LFD +++  V P
Sbjct: 609 GLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRP 668

Query: 402 DLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELF 461
           D  TYN  I   CK   V +A   F+    N F      +N L+  L K    +N + + 
Sbjct: 669 DAFTYNTFISWQCKEGMVNDACLFFYRGIENGFVPSNLTWNVLVYTLLKQSNQENNFFVL 728

Query: 462 HKL 464
            +L
Sbjct: 729 DEL 731



 Score = 99.0 bits (245), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 69/256 (26%), Positives = 119/256 (46%), Gaps = 4/256 (1%)

Query: 314 IDTAREIFLSMH-SKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYN 372
           + T  EIF  +   KG  HT   Y + IN    I   +    L  Q+   G+      + 
Sbjct: 92  VPTLLEIFERVGGQKGYCHTFDVYYVFINKLGAIGKFKLIDKLLMQMKEEGIVFRESIFM 151

Query: 373 TLLSGLFQAGQAGYAQKLFDEMK-LYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
            ++    +AGQ G A +L  +M+ +Y  EP   +Y+++++ L   NC Q A  +F+ +  
Sbjct: 152 IIMKHYGKAGQPGQAIRLLLDMRAVYLCEPTFKSYDLVLEILVTGNCPQVATNVFYDMLS 211

Query: 432 NKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEK 491
                 +  F  ++  LC    +D+A  L   + + G VP  + Y  +IH L +K ++ +
Sbjct: 212 KGVSPTVFTFGIVMKALCMFNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQVSE 271

Query: 492 ANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIV 551
           A   L  M   GC P+V TFN ++HG  + NK     +L+ +M    R   PD+ T+  +
Sbjct: 272 ALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKIHDATKLVDRML--LRGFYPDNMTYGFL 329

Query: 552 VDLLAKDEKYHECSAV 567
           +  L +  K +E   +
Sbjct: 330 LHGLCRIGKLNEARKI 345


>gi|449444522|ref|XP_004140023.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g79540-like [Cucumis sativus]
          Length = 783

 Score =  218 bits (555), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 144/511 (28%), Positives = 254/511 (49%), Gaps = 30/511 (5%)

Query: 63  FGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGN 122
           FG M      P + +FNL+   + +   +   ++ Y +++   L PD +T  ILI+    
Sbjct: 151 FGLMRDFDCKPDLFAFNLILHFLVRKEAFLLALAVYNQMLKCNLNPDVVTYGILIH---- 206

Query: 123 KERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGD 182
              GLC   + ++A  LF  M   G+ P+ I Y  +++G C+   +  A RL  KM +  
Sbjct: 207 ---GLCKTCKTQDALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASG 263

Query: 183 YENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAG 242
               LI+      Y+++++  CK G +D A  L   +   G    V+    LI+G   A 
Sbjct: 264 CNRDLIT------YNVLLNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRAR 317

Query: 243 NWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYN 302
            +EE +  + +ML    +P+++ + +MI  L + G++ EA  LL  M +RGL PD   YN
Sbjct: 318 RYEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYN 377

Query: 303 SLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISN 362
           +L+ G+C +G +D A  + L +    C     +Y+ILI G CK   + +A  +++++   
Sbjct: 378 ALIKGFCDMGYLDEAESLRLEISKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKL 437

Query: 363 GVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEP--------------DLSTYNI 408
           G   +V+T+N+L++GL +A +   A+ LF +M++   +P              D+++  +
Sbjct: 438 GCLPSVVTFNSLINGLCKANRLEEARLLFYQMEIVR-KPSLFLRLSQGTDKVFDIASLQV 496

Query: 409 LIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKG 468
           +++ LC++  + +A KL   L  +     I  +N LI+G CK G ++ A++LF ++  KG
Sbjct: 497 MMERLCESGMILKAYKLLMQLVDSGVLPDIRTYNILINGFCKFGNINGAFKLFKEMQLKG 556

Query: 469 LVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVV 528
            +P  VTY  +I GL R G+ E A +    M K GC P   T+ T+M    + N  S  +
Sbjct: 557 HMPDSVTYGTLIDGLYRAGRNEDALEIFEQMVKKGCVPESSTYKTIMTWSCRENNISLAL 616

Query: 529 ELLHKMAEPERNLVPDDTTFSIVVDLLAKDE 559
            +  K     R    +D    +V +    +E
Sbjct: 617 SVWMKYLRDFRGW--EDEKVRVVAESFDNEE 645



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 122/437 (27%), Positives = 213/437 (48%), Gaps = 21/437 (4%)

Query: 134 KEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNI 193
           ++A   F  M  F  +PD+  +  +++   R     +AL ++ +M+  +         ++
Sbjct: 145 EKAVESFGLMRDFDCKPDLFAFNLILHFLVRKEAFLLALAVYNQMLKCNL------NPDV 198

Query: 194 FSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIE 253
            +Y I+I  LCK      A  LF EM  RGI P  ++ + ++ G C A    +   LF +
Sbjct: 199 VTYGILIHGLCKTCKTQDALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDAQRLFSK 258

Query: 254 MLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGR 313
           M   G   +L+T+NV+++  CK G +++A  LL+L+ + G       Y  L++G     R
Sbjct: 259 MRASGCNRDLITYNVLLNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARR 318

Query: 314 IDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNT 373
            + A   +  M  +  K  V+ Y I+I G  +   V EA++L  ++   G+R   I YN 
Sbjct: 319 YEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNA 378

Query: 374 LLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNK 433
           L+ G    G    A+ L  E+  ++  P+  TY+ILI G+CKN  + +A  +F  +E   
Sbjct: 379 LIKGFCDMGYLDEAESLRLEISKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKLG 438

Query: 434 FEFGIEIFNCLIDGLCKAGRLDNAWELFHKL-----PQKGL--------VPTVVTYSIMI 480
               +  FN LI+GLCKA RL+ A  LF+++     P   L        V  + +  +M+
Sbjct: 439 CLPSVVTFNSLINGLCKANRLEEARLLFYQMEIVRKPSLFLRLSQGTDKVFDIASLQVMM 498

Query: 481 HGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERN 540
             LC  G + KA   L+ +  +G  P++ T+N L++GF +    +   +L  +M    + 
Sbjct: 499 ERLCESGMILKAYKLLMQLVDSGVLPDIRTYNILINGFCKFGNINGAFKLFKEMQ--LKG 556

Query: 541 LVPDDTTFSIVVDLLAK 557
            +PD  T+  ++D L +
Sbjct: 557 HMPDSVTYGTLIDGLYR 573



 Score =  162 bits (409), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 149/523 (28%), Positives = 228/523 (43%), Gaps = 90/523 (17%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
           N  L+  CKSG   L++A      +T       +  +  L   + + R Y+    +Y+K+
Sbjct: 272 NVLLNGFCKSGY--LDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKM 329

Query: 102 VSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLING 161
           +   + PD +   I+I       RGL  E R+ EA  L   M   G+RPD I Y  LI G
Sbjct: 330 LRENIKPDVMLYTIMI-------RGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKG 382

Query: 162 FCRTGNLSVA--LRLHKKMVSGDYENGLISKTNIF----SYSIIIDSLCKEGLVDKAKEL 215
           FC  G L  A  LRL             ISK + F    +YSI+I  +CK GL++KA+ +
Sbjct: 383 FCDMGYLDEAESLRLE------------ISKHDCFPNNHTYSILICGMCKNGLINKAQHI 430

Query: 216 FLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEM--------------------- 254
           F EM+  G  P+VV   +LI+G C A   EE   LF +M                     
Sbjct: 431 FKEMEKLGCLPSVVTFNSLINGLCKANRLEEARLLFYQMEIVRKPSLFLRLSQGTDKVFD 490

Query: 255 ---------------------------LDLGPRPNLLTFNVMIDCLCKGGKINEANGLLE 287
                                      +D G  P++ T+N++I+  CK G IN A  L +
Sbjct: 491 IASLQVMMERLCESGMILKAYKLLMQLVDSGVLPDIRTYNILINGFCKFGNINGAFKLFK 550

Query: 288 LMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKIL 347
            M  +G  PD  TY +L+DG    GR + A EIF  M  KGC     +Y  ++   C+  
Sbjct: 551 EMQLKGHMPDSVTYGTLIDGLYRAGRNEDALEIFEQMVKKGCVPESSTYKTIMTWSCREN 610

Query: 348 NVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYN 407
           N+  A+S++ + + +  R        +++  F   +   A +   EM + +   DL+ Y 
Sbjct: 611 NISLALSVWMKYLRD-FRGWEDEKVRVVAESFDNEELQTAIRRLLEMDIKSKNFDLAPYT 669

Query: 408 ILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNC--LIDGLCKAGRLDNAWELFHKLP 465
           I + GL +     EA  +F +L+   F+  I   +C  LI  LC    LD A ++F    
Sbjct: 670 IFLIGLVQAKRDCEAFAIFSVLK--DFKMNISSASCVMLIGRLCMVENLDMAMDVFLFTL 727

Query: 466 QKG--LVPTVVTYSIMIHGLCRKGKLEKANDFLLY---MEKNG 503
           ++G  L+P +         LC    L++ +D L     ME +G
Sbjct: 728 ERGFRLMPPICN-----QLLCNLLHLDRKDDALFLANRMEASG 765


>gi|32489921|emb|CAE05513.1| OSJNBa0038P21.6 [Oryza sativa Japonica Group]
          Length = 648

 Score =  218 bits (555), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 159/599 (26%), Positives = 268/599 (44%), Gaps = 81/599 (13%)

Query: 35  SSPETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAV 94
           S+P T L + L   C    + L      FG +      P + S+N L    +K    D  
Sbjct: 28  STPTTSLIDVLPAECTGPELAL----AVFGRLLRTGLGPDVCSYNTLIDGFSKEGEVDKA 83

Query: 95  ISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVIT 154
              + K++   + PD +T N LI+       GLC    + ++  + + M+  G+RP+  T
Sbjct: 84  YELFYKMIEQSVSPDVVTYNSLID-------GLCKTKEMVKSERVLEQMVDAGIRPNNKT 136

Query: 155 YGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKE 214
           Y +LI G+   G    ++R+ K+M S    +GLI    + + +  I +LC+   + +AK+
Sbjct: 137 YNSLIYGYSTAGMWKESVRVFKEMSS----SGLIP--CVVNCNSFIHALCRHNRIKEAKD 190

Query: 215 LFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLC 274
           +F  M  +G  P ++  +TL+HG+   G +  +N L   M+  G  PN   FN++I+   
Sbjct: 191 IFDSMVLKGPKPNIISYSTLLHGYAAEGCFANMNSLVNLMVSKGIVPNHRFFNILINAYA 250

Query: 275 KGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVV 334
           + G +++A  + E M  +G+ PD  T+ +++   C +GR+D A   F  M   G   +  
Sbjct: 251 RCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEA 310

Query: 335 SYNILINGYC-----------------------------KILN-------VEEAMSLYRQ 358
            Y  LI G C                              I+N       V E   +   
Sbjct: 311 VYRCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLFKEGRVAEGKDIMDL 370

Query: 359 IISNGVRQTVITYNTLLSGL--------------------------FQAGQAGYAQKLFD 392
           ++  G R  V+T+N+L+ G                           + A +   A+K+F 
Sbjct: 371 MVQTGQRPNVVTFNSLMEGYCLVGNMEEALHYLMLWHQLALNRIVTYMARRTTAAKKMFH 430

Query: 393 EMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAG 452
           EM        + TY +++ GLC+NNC  EA  L   L     +F I  FN +I  + K G
Sbjct: 431 EMIESGTTVSIQTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMLKVG 490

Query: 453 RLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFN 512
           R   A ELF  +   GLVPTV TY++MI  L ++   E+A++  + +EK+G AP+    N
Sbjct: 491 RRQEAKELFAAISTYGLVPTVHTYNLMISNLIKEESYEEADNLFISVEKSGRAPDSRLLN 550

Query: 513 TLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKSS 571
            ++   L+  + +K    L  +   E NL  + +T S++  L ++++   E S    SS
Sbjct: 551 HIVRMLLKKAEVAKASNYLSIID--ENNLTLEASTISLLASLFSREDTQREPSETCLSS 607


>gi|357521289|ref|XP_003630933.1| Tau class glutathione S-transferase [Medicago truncatula]
 gi|355524955|gb|AET05409.1| Tau class glutathione S-transferase [Medicago truncatula]
          Length = 1320

 Score =  218 bits (555), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 125/412 (30%), Positives = 214/412 (51%), Gaps = 13/412 (3%)

Query: 92  DAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPD 151
           D V+    +L   GL PD    N +I         LC    + EA  L + M  +GV PD
Sbjct: 294 DKVLKLVDELKGKGLKPDEYIYNNIILL-------LCKNGEVVEAEQLLRGMRKWGVFPD 346

Query: 152 VITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDK 211
            + Y T+I+GFC+ GN+S A +L  +M             +I +Y+ +I  +CK G + +
Sbjct: 347 NVVYTTVISGFCKLGNVSAACKLFDEMRRKKI------VPDIVTYTSVIHGICKSGKMVE 400

Query: 212 AKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMID 271
           A+E+F EM  +G+ P  V  T LI G+C AG  +E   +  +M+  G  PN++T+  + D
Sbjct: 401 AREMFNEMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALAD 460

Query: 272 CLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKH 331
            LCK G+I+ AN LL  M ++GL P+ +TYN++++G C +G I+   ++   M   G   
Sbjct: 461 GLCKNGEIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYP 520

Query: 332 TVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLF 391
             ++Y  L++ YCK+  + +A  L R +++  ++ T++T+N L++G   +G     ++L 
Sbjct: 521 DTITYTTLMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLI 580

Query: 392 DEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKA 451
           + M    + P+ +T+N L+   C  N ++   +++  +           +N LI G CKA
Sbjct: 581 EWMLEKGIMPNATTFNSLMKQYCIKNNMRATTEIYKAMHDRGVMPDSNTYNILIKGHCKA 640

Query: 452 GRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNG 503
             +  AW L  ++ +KG   T  TY  +I G  ++ K  +A      M K+G
Sbjct: 641 RNMKEAWFLHKEMVEKGYSVTAATYDALIRGFYKRKKFVEARKLFEEMRKHG 692



 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 143/525 (27%), Positives = 255/525 (48%), Gaps = 20/525 (3%)

Query: 33  AVSSPETQL-NEFLHENCKSGIINLNEARYFFGYM---THMQPSPPISSFNLLFGAVAKN 88
           +V+S + Q     + E C    I+++++ + F  M   T+         F+L F  + +N
Sbjct: 125 SVASNDIQTAKRLVFEFCAKPKIDVSKSFHLFTEMLIYTYKDWGSHPLVFDLYFQVLVEN 184

Query: 89  RHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGV 148
                    + KL+  G++    + N+ ++      R  C    IK A  +F+     GV
Sbjct: 185 GFVLEAQKLFHKLLRYGVVVSVDSCNLFLS------RLSCNFEGIKIAVKVFEEFPELGV 238

Query: 149 RPDVITYGTLINGFCRTGNLSVALRLHKKMVS-GDYENGLISKTNIFSYSIIIDSLCKEG 207
             + ++   +++  C+ G +  A  L  +M   G++ + +     +          C+ G
Sbjct: 239 CWNTVSCNIVLHCLCQLGKVREAHNLLVQMTDRGNFPDVVSYGVVV-------SGYCRIG 291

Query: 208 LVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFN 267
            +DK  +L  E+KG+G+ P   +   +I   C  G   E   L   M   G  P+ + + 
Sbjct: 292 ELDKVLKLVDELKGKGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYT 351

Query: 268 VMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSK 327
            +I   CK G ++ A  L + M ++ + PD  TY S++ G C  G++  ARE+F  M  K
Sbjct: 352 TVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVK 411

Query: 328 GCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYA 387
           G +   V+Y  LI+GYCK   ++EA S++ Q++  G+   V+TY  L  GL + G+   A
Sbjct: 412 GLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVA 471

Query: 388 QKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDG 447
            +L  EM    ++P++ TYN +++GLCK   +++ VKL   +++  F      +  L+D 
Sbjct: 472 NELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDA 531

Query: 448 LCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPN 507
            CK G +  A EL   +  K L PT+VT++++++G C  G LE     + +M + G  PN
Sbjct: 532 YCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPN 591

Query: 508 VVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVV 552
             TFN+LM  +   N      E+   M   +R ++PD  T++I++
Sbjct: 592 ATTFNSLMKQYCIKNNMRATTEIYKAMH--DRGVMPDSNTYNILI 634



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 122/409 (29%), Positives = 207/409 (50%), Gaps = 10/409 (2%)

Query: 147 GVRPDVITYGTLINGFCRTGNLSVALRLHKKMVS-GDYENGLISKTNIFSYSIIIDSLCK 205
           G++PD   Y  +I   C+ G +  A +L + M   G + + ++       Y+ +I   CK
Sbjct: 307 GLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNVV-------YTTVISGFCK 359

Query: 206 EGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLT 265
            G V  A +LF EM+ + I P +V  T++IHG C +G   E   +F EML  G  P+ +T
Sbjct: 360 LGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVT 419

Query: 266 FNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMH 325
           +  +ID  CK G++ EA  +   M+Q+GL P+  TY +L DG C  G ID A E+   M 
Sbjct: 420 YTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMS 479

Query: 326 SKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAG 385
            KG +  V +YN ++NG CKI N+E+ + L  ++   G     ITY TL+    + G+  
Sbjct: 480 RKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMA 539

Query: 386 YAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLI 445
            A +L   M    ++P L T+N+L++G C +  +++  +L   +           FN L+
Sbjct: 540 KAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNATTFNSLM 599

Query: 446 DGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCA 505
              C    +    E++  +  +G++P   TY+I+I G C+   +++A      M + G +
Sbjct: 600 KQYCIKNNMRATTEIYKAMHDRGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKGYS 659

Query: 506 PNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDL 554
               T++ L+ GF +  K  +  +L  +M   +  LV +   + I VD+
Sbjct: 660 VTAATYDALIRGFYKRKKFVEARKLFEEMR--KHGLVAEKDIYDIFVDV 706



 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 136/439 (30%), Positives = 224/439 (51%), Gaps = 14/439 (3%)

Query: 95  ISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVIT 154
           +  + +   +G+  + ++ NI+++C       LC   +++EA  L   M   G  PDV++
Sbjct: 227 VKVFEEFPELGVCWNTVSCNIVLHC-------LCQLGKVREAHNLLVQMTDRGNFPDVVS 279

Query: 155 YGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKE 214
           YG +++G+CR G L   L+L  ++       G   K + + Y+ II  LCK G V +A++
Sbjct: 280 YGVVVSGYCRIGELDKVLKLVDEL------KGKGLKPDEYIYNNIILLLCKNGEVVEAEQ 333

Query: 215 LFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLC 274
           L   M+  G+ P  VV TT+I GFC  GN      LF EM      P+++T+  +I  +C
Sbjct: 334 LLRGMRKWGVFPDNVVYTTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGIC 393

Query: 275 KGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVV 334
           K GK+ EA  +   M+ +GL PD  TY +L+DGYC  G +  A  +   M  KG    VV
Sbjct: 394 KSGKMVEAREMFNEMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVV 453

Query: 335 SYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEM 394
           +Y  L +G CK   ++ A  L  ++   G++  V TYNT+++GL + G      KL +EM
Sbjct: 454 TYTALADGLCKNGEIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEM 513

Query: 395 KLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRL 454
            L    PD  TY  L+D  CK   + +A +L  ++   + +  +  FN L++G C +G L
Sbjct: 514 DLAGFYPDTITYTTLMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGML 573

Query: 455 DNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTL 514
           ++   L   + +KG++P   T++ ++   C K  +    +    M   G  P+  T+N L
Sbjct: 574 EDGERLIEWMLEKGIMPNATTFNSLMKQYCIKNNMRATTEIYKAMHDRGVMPDSNTYNIL 633

Query: 515 MHGFLQNNKTSKVVELLHK 533
           + G  +  +  K    LHK
Sbjct: 634 IKGHCK-ARNMKEAWFLHK 651



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 111/378 (29%), Positives = 188/378 (49%), Gaps = 61/378 (16%)

Query: 82  FGAVAKNRHYDAVISFYRKLVSIG-------------LLPDFLTLNILINCFGNKERGLC 128
           +G    N  Y  VIS + KL ++              ++PD +T   +I+       G+C
Sbjct: 341 WGVFPDNVVYTTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIH-------GIC 393

Query: 129 VENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLI 188
              ++ EA  +F  M+  G+ PD +TY  LI+G+C+ G +  A  +H +MV    + GL 
Sbjct: 394 KSGKMVEAREMFNEMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMV----QKGLT 449

Query: 189 SKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVN 248
              N+ +Y+ + D LCK G +D A EL  EM  +G+ P V    T+++G C  GN E+  
Sbjct: 450 P--NVVTYTALADGLCKNGEIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTV 507

Query: 249 GLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGY 308
            L  EM   G  P+ +T+  ++D  CK G++ +A+ LL +M+ + L P   T+N LM+G+
Sbjct: 508 KLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGF 567

Query: 309 CLVGRID-----------------------------------TAREIFLSMHSKGCKHTV 333
           C+ G ++                                      EI+ +MH +G     
Sbjct: 568 CMSGMLEDGERLIEWMLEKGIMPNATTFNSLMKQYCIKNNMRATTEIYKAMHDRGVMPDS 627

Query: 334 VSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDE 393
            +YNILI G+CK  N++EA  L+++++  G   T  TY+ L+ G ++  +   A+KLF+E
Sbjct: 628 NTYNILIKGHCKARNMKEAWFLHKEMVEKGYSVTAATYDALIRGFYKRKKFVEARKLFEE 687

Query: 394 MKLYNVEPDLSTYNILID 411
           M+ + +  +   Y+I +D
Sbjct: 688 MRKHGLVAEKDIYDIFVD 705



 Score =  145 bits (366), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 100/350 (28%), Positives = 162/350 (46%), Gaps = 17/350 (4%)

Query: 45  LHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSI 104
           +H  CKSG   + EAR  F  M      P   ++  L     K        S + ++V  
Sbjct: 389 IHGICKSG--KMVEAREMFNEMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQK 446

Query: 105 GLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCR 164
           GL P+ +T   L +       GLC    I  A  L   M   G++P+V TY T++NG C+
Sbjct: 447 GLTPNVVTYTALAD-------GLCKNGEIDVANELLHEMSRKGLQPNVYTYNTIVNGLCK 499

Query: 165 TGNLSVALRLHKKM-VSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRG 223
            GN+   ++L ++M ++G Y + +       +Y+ ++D+ CK G + KA EL   M  + 
Sbjct: 500 IGNIEQTVKLMEEMDLAGFYPDTI-------TYTTLMDAYCKMGEMAKAHELLRIMLNKR 552

Query: 224 INPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEAN 283
           + P +V    L++GFC +G  E+   L   ML+ G  PN  TFN ++   C    +    
Sbjct: 553 LQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNATTFNSLMKQYCIKNNMRATT 612

Query: 284 GLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGY 343
            + + M  RG+ PD  TYN L+ G+C    +  A  +   M  KG   T  +Y+ LI G+
Sbjct: 613 EIYKAMHDRGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKGYSVTAATYDALIRGF 672

Query: 344 CKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDE 393
            K     EA  L+ ++  +G+      Y+  +   ++ G      +L DE
Sbjct: 673 YKRKKFVEARKLFEEMRKHGLVAEKDIYDIFVDVNYEEGNWEITLELCDE 722



 Score = 56.2 bits (134), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 58/236 (24%), Positives = 95/236 (40%), Gaps = 46/236 (19%)

Query: 369 ITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGL-CKNNCVQEAVKLFH 427
           + ++     L + G    AQKLF ++  Y V   + + N+ +  L C    ++ AVK+F 
Sbjct: 172 LVFDLYFQVLVENGFVLEAQKLFHKLLRYGVVVSVDSCNLFLSRLSCNFEGIKIAVKVFE 231

Query: 428 MLEMNKFEFGI---------------------EIFNCLID------------------GL 448
                  E G+                     E  N L+                   G 
Sbjct: 232 EFP----ELGVCWNTVSCNIVLHCLCQLGKVREAHNLLVQMTDRGNFPDVVSYGVVVSGY 287

Query: 449 CKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNV 508
           C+ G LD   +L  +L  KGL P    Y+ +I  LC+ G++ +A   L  M K G  P+ 
Sbjct: 288 CRIGELDKVLKLVDELKGKGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDN 347

Query: 509 VTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHEC 564
           V + T++ GF +    S   +L  +M    + +VPD  T++ V+  + K  K  E 
Sbjct: 348 VVYTTVISGFCKLGNVSAACKLFDEMR--RKKIVPDIVTYTSVIHGICKSGKMVEA 401


>gi|357142605|ref|XP_003572629.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 543

 Score =  218 bits (555), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 138/525 (26%), Positives = 240/525 (45%), Gaps = 44/525 (8%)

Query: 45  LHENCKSGIINLNEARYFFGYMTHMQPSPPISS---FNLLFGAVAKNRHYDAVISFYRKL 101
           L   C     + +   +     T   P PP  S    N     + +    D  +     +
Sbjct: 28  LKPKCPQAAADYHNRDHGTAKWTRTPPKPPARSGGGANRRLRGLVQRGELDGALRLVHSI 87

Query: 102 VSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLING 161
              G  P  +  NILI       + LC + R+ +A  + +   A G    +ITY T++NG
Sbjct: 88  SGSGKDPAVIPCNILI-------KKLCADGRVADAERVVE---ALGPSATIITYNTMVNG 137

Query: 162 FCRTGNLSVALRLHKKM-----------------VSGDYENGLI---------SKTNIFS 195
           +CR GN+  A R+   +                 V G   + L             ++ +
Sbjct: 138 YCRAGNIDAARRMIDSVPFAPDTFTYNPLIRALCVRGCVLDALAVFDDMLHRGCSPSVVT 197

Query: 196 YSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEML 255
           YSI++D+ CKE    +A  L  EM+ +G  P +V    LI+  C  G+  E   +   + 
Sbjct: 198 YSILLDATCKESGYKQAVVLLDEMRSKGCEPDIVTYNVLINAMCSQGDVGEALKVLNSLP 257

Query: 256 DLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRID 315
             G +P+ +T+  ++  LC   +  EA+ LL  M      PD  T+N+++   C  G + 
Sbjct: 258 SYGCKPDAVTYTPVLKSLCSSERWEEADKLLTKMFSNDCAPDEVTFNAVITSLCQKGFVG 317

Query: 316 TAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVI----TY 371
            A ++   M   GC   +++Y+ +++G CK   V+EA+ L +++++  V +  I    T+
Sbjct: 318 RATKVLAQMSEHGCTPDIITYSSIMDGLCKERRVDEAIKLLKELLAEMVSKNCIPDQVTF 377

Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDG-LCKNNCVQEAVKLFHMLE 430
           NT+++ L Q G    A K+ DEM  +   PD++TYN ++DG LCK+   +EA+ L +++ 
Sbjct: 378 NTIITSLCQKGLFDRAIKVVDEMSEHGCIPDITTYNCIVDGFLCKSCKTEEALDLLNLMV 437

Query: 431 MNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLE 490
            N        +  L  GL +   ++ A  +F ++   GL P  + Y+ ++ GLC+K + +
Sbjct: 438 SNGLCPDTTTYKSLAFGLSREDEMERAIGMFRRVQAMGLSPDKMLYNAILLGLCKKWRTD 497

Query: 491 KANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMA 535
            A DF  YM  NGC P+  T+  L+ G        +  ELL  ++
Sbjct: 498 LAIDFFAYMVSNGCMPDESTYIILVEGIAYEGFLEEAKELLGNLS 542



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 119/434 (27%), Positives = 205/434 (47%), Gaps = 21/434 (4%)

Query: 125 RGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYE 184
           RGL     +  A  L  ++   G  P VI    LI   C  G ++ A R+ +        
Sbjct: 69  RGLVQRGELDGALRLVHSISGSGKDPAVIPCNILIKKLCADGRVADAERVVE-------- 120

Query: 185 NGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNW 244
             L     I +Y+ +++  C+ G +D A+ +   +      P       LI   C  G  
Sbjct: 121 -ALGPSATIITYNTMVNGYCRAGNIDAARRMIDSVP---FAPDTFTYNPLIRALCVRGCV 176

Query: 245 EEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSL 304
            +   +F +ML  G  P+++T+++++D  CK     +A  LL+ M  +G  PD  TYN L
Sbjct: 177 LDALAVFDDMLHRGCSPSVVTYSILLDATCKESGYKQAVVLLDEMRSKGCEPDIVTYNVL 236

Query: 305 MDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGV 364
           ++  C  G +  A ++  S+ S GCK   V+Y  ++   C     EEA  L  ++ SN  
Sbjct: 237 INAMCSQGDVGEALKVLNSLPSYGCKPDAVTYTPVLKSLCSSERWEEADKLLTKMFSNDC 296

Query: 365 RQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVK 424
               +T+N +++ L Q G  G A K+  +M  +   PD+ TY+ ++DGLCK   V EA+K
Sbjct: 297 APDEVTFNAVITSLCQKGFVGRATKVLAQMSEHGCTPDIITYSSIMDGLCKERRVDEAIK 356

Query: 425 LF-----HMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIM 479
           L       M+  N     +  FN +I  LC+ G  D A ++  ++ + G +P + TY+ +
Sbjct: 357 LLKELLAEMVSKNCIPDQV-TFNTIITSLCQKGLFDRAIKVVDEMSEHGCIPDITTYNCI 415

Query: 480 IHG-LCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPE 538
           + G LC+  K E+A D L  M  NG  P+  T+ +L  G  + ++  + + +  ++    
Sbjct: 416 VDGFLCKSCKTEEALDLLNLMVSNGLCPDTTTYKSLAFGLSREDEMERAIGMFRRVQ--A 473

Query: 539 RNLVPDDTTFSIVV 552
             L PD   ++ ++
Sbjct: 474 MGLSPDKMLYNAIL 487



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 107/405 (26%), Positives = 193/405 (47%), Gaps = 22/405 (5%)

Query: 29  RQIAAVS-SPET-QLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVA 86
           R I +V  +P+T   N  +   C  G +   +A   F  M H   SP + ++++L  A  
Sbjct: 149 RMIDSVPFAPDTFTYNPLIRALCVRGCVL--DALAVFDDMLHRGCSPSVVTYSILLDATC 206

Query: 87  KNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAF 146
           K   Y   +    ++ S G  PD +T N+LIN        +C +  + EA  +  ++ ++
Sbjct: 207 KESGYKQAVVLLDEMRSKGCEPDIVTYNVLIN-------AMCSQGDVGEALKVLNSLPSY 259

Query: 147 GVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKE 206
           G +PD +TY  ++   C +     A +L  KM S D         +  +++ +I SLC++
Sbjct: 260 GCKPDAVTYTPVLKSLCSSERWEEADKLLTKMFSND------CAPDEVTFNAVITSLCQK 313

Query: 207 GLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEE----VNGLFIEMLDLGPRPN 262
           G V +A ++  +M   G  P ++  ++++ G C     +E    +  L  EM+     P+
Sbjct: 314 GFVGRATKVLAQMSEHGCTPDIITYSSIMDGLCKERRVDEAIKLLKELLAEMVSKNCIPD 373

Query: 263 LLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGY-CLVGRIDTAREIF 321
            +TFN +I  LC+ G  + A  +++ M + G  PD  TYN ++DG+ C   + + A ++ 
Sbjct: 374 QVTFNTIITSLCQKGLFDRAIKVVDEMSEHGCIPDITTYNCIVDGFLCKSCKTEEALDLL 433

Query: 322 LSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQA 381
             M S G      +Y  L  G  +   +E A+ ++R++ + G+    + YN +L GL + 
Sbjct: 434 NLMVSNGLCPDTTTYKSLAFGLSREDEMERAIGMFRRVQAMGLSPDKMLYNAILLGLCKK 493

Query: 382 GQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLF 426
            +   A   F  M      PD STY IL++G+     ++EA +L 
Sbjct: 494 WRTDLAIDFFAYMVSNGCMPDESTYIILVEGIAYEGFLEEAKELL 538



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 87/291 (29%), Positives = 143/291 (49%), Gaps = 8/291 (2%)

Query: 273 LCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHT 332
           L + G+++ A  L+  +   G +P     N L+   C  GR+  A  +  ++   G   T
Sbjct: 71  LVQRGELDGALRLVHSISGSGKDPAVIPCNILIKKLCADGRVADAERVVEAL---GPSAT 127

Query: 333 VVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFD 392
           +++YN ++NGYC+  N++ A    R I S        TYN L+  L   G    A  +FD
Sbjct: 128 IITYNTMVNGYCRAGNIDAA---RRMIDSVPFAPDTFTYNPLIRALCVRGCVLDALAVFD 184

Query: 393 EMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAG 452
           +M      P + TY+IL+D  CK +  ++AV L   +     E  I  +N LI+ +C  G
Sbjct: 185 DMLHRGCSPSVVTYSILLDATCKESGYKQAVVLLDEMRSKGCEPDIVTYNVLINAMCSQG 244

Query: 453 RLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFN 512
            +  A ++ + LP  G  P  VTY+ ++  LC   + E+A+  L  M  N CAP+ VTFN
Sbjct: 245 DVGEALKVLNSLPSYGCKPDAVTYTPVLKSLCSSERWEEADKLLTKMFSNDCAPDEVTFN 304

Query: 513 TLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
            ++    Q     +  ++L +M+E      PD  T+S ++D L K+ +  E
Sbjct: 305 AVITSLCQKGFVGRATKVLAQMSE--HGCTPDIITYSSIMDGLCKERRVDE 353



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 55/224 (24%), Positives = 97/224 (43%), Gaps = 37/224 (16%)

Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
           N  L GL Q G+   A +L   +     +P +   NILI  LC +  V +A ++   L  
Sbjct: 65  NRRLRGLVQRGELDGALRLVHSISGSGKDPAVIPCNILIKKLCADGRVADAERVVEALGP 124

Query: 432 NKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLP-------------------------- 465
           +     I  +N +++G C+AG +D A  +   +P                          
Sbjct: 125 SAT---IITYNTMVNGYCRAGNIDAARRMIDSVPFAPDTFTYNPLIRALCVRGCVLDALA 181

Query: 466 ------QKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFL 519
                  +G  P+VVTYSI++   C++   ++A   L  M   GC P++VT+N L++   
Sbjct: 182 VFDDMLHRGCSPSVVTYSILLDATCKESGYKQAVVLLDEMRSKGCEPDIVTYNVLINAMC 241

Query: 520 QNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
                 + +++L+ +  P     PD  T++ V+  L   E++ E
Sbjct: 242 SQGDVGEALKVLNSL--PSYGCKPDAVTYTPVLKSLCSSERWEE 283


>gi|358347154|ref|XP_003637626.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503561|gb|AES84764.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 989

 Score =  218 bits (554), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 139/498 (27%), Positives = 247/498 (49%), Gaps = 36/498 (7%)

Query: 75  ISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIK 134
           +S F  L      +  +    + +  + ++GL+P     N L+  F     GL     + 
Sbjct: 59  VSFFCTLIRLYLTHDRFSTASATFSHMRALGLVPTLPFWNTLLYQFN--ASGL-----VS 111

Query: 135 EATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIF 194
           +   ++ +M+  GV PDV +   L++  C+ G+L +AL        G   N  +   +  
Sbjct: 112 QVKLMYSDMLFCGVVPDVFSVNVLVHSLCKVGDLDLAL--------GYLRNNDVVDIDNV 163

Query: 195 SYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEM 254
           +Y+ +I   C++GLVD+   L  EM  RG+    + C  L+ G+C  G  +    +   +
Sbjct: 164 TYNTVIWGFCQKGLVDQGFGLLSEMVKRGLCFDSITCNILVKGYCRIGLVQYAEWVMYNL 223

Query: 255 LDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRI 314
           +D G   +++  N +ID  C+   +++A  L+E   +  +  D  TYN+L+  +C  G +
Sbjct: 224 VDGGVTKDVIGLNTLIDGYCEAVLMSQATELIENSWRSDVKIDIVTYNTLLKAFCKTGDL 283

Query: 315 DTAREIFLSM-------------------HSKGCKHTVVSYNILINGYCKILNVEEAMSL 355
             A  +F  +                     K  + T+V+Y  LI  YCK + VEE+ SL
Sbjct: 284 TRAESLFNEILGFWKDEDRLKNNDVVTQNEIKNLQPTLVTYTTLIAAYCKFVGVEESHSL 343

Query: 356 YRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCK 415
           Y+++I NG+   V+T +++L G  + G+   A  LF EM    ++P+  +Y  +I+ L K
Sbjct: 344 YKKMIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFK 403

Query: 416 NNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVT 475
           +  V EA  L   + +    F I     ++DGL K G+   A E+F  + +  L P  VT
Sbjct: 404 SGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVT 463

Query: 476 YSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMA 535
           YS ++ G C+ GK+E A   L  MEK    PNV+TF+++++G+ +    SK V++L +M 
Sbjct: 464 YSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMV 523

Query: 536 EPERNLVPDDTTFSIVVD 553
             +RN++P+   ++I++D
Sbjct: 524 --QRNVMPNTIVYAILID 539



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 138/472 (29%), Positives = 240/472 (50%), Gaps = 35/472 (7%)

Query: 101 LVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLIN 160
           LV  G+  D + LN LI+       G C    + +AT L +N     V+ D++TY TL+ 
Sbjct: 223 LVDGGVTKDVIGLNTLID-------GYCEAVLMSQATELIENSWRSDVKIDIVTYNTLLK 275

Query: 161 GFCRTGNLSVALRLHKKMVS--GDYE----NGLISKTNI-------FSYSIIIDSLCKEG 207
            FC+TG+L+ A  L  +++    D +    N ++++  I        +Y+ +I + CK  
Sbjct: 276 AFCKTGDLTRAESLFNEILGFWKDEDRLKNNDVVTQNEIKNLQPTLVTYTTLIAAYCKFV 335

Query: 208 LVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFN 267
            V+++  L+ +M   GI P VV C+++++GFC  G   E   LF EM ++G  PN +++ 
Sbjct: 336 GVEESHSLYKKMIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYA 395

Query: 268 VMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSK 327
            +I+ L K G++ EA  L   M+ RG++ D  T  ++MDG   VG+   A E+F ++   
Sbjct: 396 TIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKL 455

Query: 328 GCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYA 387
                 V+Y+ L++GYCK+  +E A  + +++    V   VIT++++++G  + G    A
Sbjct: 456 NLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKA 515

Query: 388 QKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDG 447
             +  EM   NV P+   Y ILIDG  K      A      ++  + E    IF+ L++ 
Sbjct: 516 VDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNN 575

Query: 448 LCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPN 507
           L + GR+D A  L   +  KG+ P +V Y+ +I G  ++G    A   +  M++     +
Sbjct: 576 LKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNIRFD 635

Query: 508 VVTFNTLMHGFLQNNKT------SKVVELLHKMAEPERNLVPDDTTFSIVVD 553
           VV +N L+ G L+  K       S+++EL          L PD  T++ +++
Sbjct: 636 VVAYNALIKGLLRLGKYDPRYVCSRMIEL---------GLAPDCITYNTIIN 678



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 132/517 (25%), Positives = 244/517 (47%), Gaps = 52/517 (10%)

Query: 72  SPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVEN 131
            P + ++  L  A  K    +   S Y+K++  G++PD +T + ++        G C   
Sbjct: 318 QPTLVTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSIL-------YGFCRHG 370

Query: 132 RIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKT 191
           ++ EA  LF+ M   G+ P+ ++Y T+IN   ++G +  A  L  +MV      G+    
Sbjct: 371 KLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVV----RGI--SF 424

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
           +I + + ++D L K G   +A+E+F  +    + P  V  + L+ G+C  G  E    + 
Sbjct: 425 DIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVL 484

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
            +M      PN++TF+ +I+   K G +++A  +L  M+QR + P+   Y  L+DGY   
Sbjct: 485 QKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKA 544

Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
           G  D A +    M S+  + + V ++IL+N   ++  ++EA SL   + S G+   ++ Y
Sbjct: 545 GEQDVADDFCKEMKSRRLEESNVIFDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNY 604

Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
            +L+ G F+ G    A  +  EMK  N+  D+  YN LI GL +            M+E+
Sbjct: 605 ASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGLLRLGKYDPRYVCSRMIEL 664

Query: 432 NKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKG---- 487
                 I  +N +I+  C  G+ ++A ++ +++   G++P  VTY+I+I GLC+ G    
Sbjct: 665 GLAPDCIT-YNTIINTYCIKGKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTGFVPT 723

Query: 488 ------------KLEKANDFLLYME--------------------KNGCAPNVVTFNTLM 515
                       + EKA+  L   E                    K G + ++VT+N L+
Sbjct: 724 PITHKFLVKAYSRSEKADKILQIHEKLVASGLELKRQKVVLDEMVKRGISADLVTYNALI 783

Query: 516 HGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVV 552
            G+   +   K ++   +M      + P+ TT++ ++
Sbjct: 784 RGYCTGSHVEKALKTYSQMFVD--GIAPNITTYNTLL 818



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 132/499 (26%), Positives = 239/499 (47%), Gaps = 21/499 (4%)

Query: 58  EARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILI 117
           EA   F  +  +  +P   +++ L     K    +      +K+    + P+ +T + +I
Sbjct: 444 EAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSII 503

Query: 118 NCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKK 177
           N +  K         + +A  + + M+   V P+ I Y  LI+G+ + G   VA    K+
Sbjct: 504 NGYAKK-------GMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKE 556

Query: 178 MVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHG 237
           M S   E     ++N+  + I++++L + G +D+A+ L ++M  +GI+P +V   +LI G
Sbjct: 557 MKSRRLE-----ESNVI-FDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDG 610

Query: 238 FCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPD 297
           +   GN      +  EM +   R +++ +N +I  L + GK  +   +   MI+ GL PD
Sbjct: 611 YFKEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGLLRLGKY-DPRYVCSRMIELGLAPD 669

Query: 298 RFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYR 357
             TYN++++ YC+ G+ + A +I   M S G     V+YNILI G CK   V   ++   
Sbjct: 670 CITYNTIINTYCIKGKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTGFVPTPITHKF 729

Query: 358 QIISNGVRQTVITYNTLLSGLFQAGQAGYAQK-LFDEMKLYNVEPDLSTYNILIDGLCKN 416
            + +    +       +   L  +G     QK + DEM    +  DL TYN LI G C  
Sbjct: 730 LVKAYSRSEKADKILQIHEKLVASGLELKRQKVVLDEMVKRGISADLVTYNALIRGYCTG 789

Query: 417 NCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAG----RLDNAWELFHKLPQKGLVPT 472
           + V++A+K +  + ++     I  +N L+ GL  AG     ++   +L  ++ ++GLVP 
Sbjct: 790 SHVEKALKTYSQMFVDGIAPNITTYNTLLGGLSNAGLMEEMMEETEKLVSEMNERGLVPN 849

Query: 473 VVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLH 532
             TY I++ G  R G  +K     + M   G  P + T+N L+  + ++ K  +  ELL+
Sbjct: 850 AATYDILVSGYGRVGNRKKTIILHIEMITKGFVPTLKTYNVLISDYAKSGKMIEARELLN 909

Query: 533 KMAEPERNLVPDDTTFSIV 551
            +    R  +P+  T+ I+
Sbjct: 910 DLLTKGR--IPNSFTYDIL 926



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 108/467 (23%), Positives = 194/467 (41%), Gaps = 112/467 (23%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CK G + L  A      M      P + +F+ +    AK       +   R++V   ++P
Sbjct: 472 CKLGKMEL--AELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMP 529

Query: 109 DFLTLNILIN--------------CFGNKERGLCVEN--------------RIKEATWLF 140
           + +   ILI+              C   K R L   N              R+ EA  L 
Sbjct: 530 NTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNLKRVGRMDEARSLI 589

Query: 141 KNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIII 200
            +M + G+ PD++ Y +LI+G+ + GN   AL + ++M   +       + ++ +Y+ +I
Sbjct: 590 IDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNI------RFDVVAYNALI 643

Query: 201 DSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPR 260
             L + G  D  + +   M   G+ P  +   T+I+ +C  G  E+   +  EM   G  
Sbjct: 644 KGLLRLGKYD-PRYVCSRMIELGLAPDCITYNTIINTYCIKGKTEDALDILNEMKSYGIM 702

Query: 261 PNLLTFNVMIDCLCKGG-------------------------KINE---ANGL------- 285
           PN +T+N++I  LCK G                         +I+E   A+GL       
Sbjct: 703 PNAVTYNILIGGLCKTGFVPTPITHKFLVKAYSRSEKADKILQIHEKLVASGLELKRQKV 762

Query: 286 -LELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYN------- 337
            L+ M++RG++ D  TYN+L+ GYC    ++ A + +  M   G    + +YN       
Sbjct: 763 VLDEMVKRGISADLVTYNALIRGYCTGSHVEKALKTYSQMFVDGIAPNITTYNTLLGGLS 822

Query: 338 --------------------------------ILINGYCKILNVEEAMSLYRQIISNGVR 365
                                           IL++GY ++ N ++ + L+ ++I+ G  
Sbjct: 823 NAGLMEEMMEETEKLVSEMNERGLVPNAATYDILVSGYGRVGNRKKTIILHIEMITKGFV 882

Query: 366 QTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDG 412
            T+ TYN L+S   ++G+   A++L +++      P+  TY+IL  G
Sbjct: 883 PTLKTYNVLISDYAKSGKMIEARELLNDLLTKGRIPNSFTYDILTCG 929



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 79/329 (24%), Positives = 142/329 (43%), Gaps = 55/329 (16%)

Query: 25  FKSPRQIAAVSSPETQLNEFLHENCKSGIINLN------------EARYFFGYMTHMQPS 72
           FK   Q+AA+S     + E   +N +  ++  N            + RY    M  +  +
Sbjct: 612 FKEGNQLAALSI----VQEMKEKNIRFDVVAYNALIKGLLRLGKYDPRYVCSRMIELGLA 667

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILI--------------- 117
           P   ++N +          +  +    ++ S G++P+ +T NILI               
Sbjct: 668 PDCITYNTIINTYCIKGKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTGFVPTPITH 727

Query: 118 ----NCFGNKERG---LCVENRI-------KEATWLFKNMIAFGVRPDVITYGTLINGFC 163
                 +   E+    L +  ++       K    +   M+  G+  D++TY  LI G+C
Sbjct: 728 KFLVKAYSRSEKADKILQIHEKLVASGLELKRQKVVLDEMVKRGISADLVTYNALIRGYC 787

Query: 164 RTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAK----ELFLEM 219
              ++  AL+ + +M    + +G+    NI +Y+ ++  L   GL+++      +L  EM
Sbjct: 788 TGSHVEKALKTYSQM----FVDGI--APNITTYNTLLGGLSNAGLMEEMMEETEKLVSEM 841

Query: 220 KGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKI 279
             RG+ P       L+ G+   GN ++   L IEM+  G  P L T+NV+I    K GK+
Sbjct: 842 NERGLVPNAATYDILVSGYGRVGNRKKTIILHIEMITKGFVPTLKTYNVLISDYAKSGKM 901

Query: 280 NEANGLLELMIQRGLNPDRFTYNSLMDGY 308
            EA  LL  ++ +G  P+ FTY+ L  G+
Sbjct: 902 IEARELLNDLLTKGRIPNSFTYDILTCGW 930


>gi|15231438|ref|NP_187385.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75204605|sp|Q9SFV9.1|PP218_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g07290, mitochondrial; Flags: Precursor
 gi|6642636|gb|AAF20217.1|AC012395_4 hypothetical protein [Arabidopsis thaliana]
 gi|332641002|gb|AEE74523.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 880

 Score =  218 bits (554), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 147/532 (27%), Positives = 248/532 (46%), Gaps = 55/532 (10%)

Query: 56  LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNI 115
            +E R  FG+  +    P  SS  LL      +  + A ++ YR++ + G +   +    
Sbjct: 147 FDELREVFGFRLNY---PCYSS--LLMSLAKLDLGFLAYVT-YRRMEADGFVVGMIDYRT 200

Query: 116 LINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLH 175
           ++N        LC     + A      ++  G   D     +L+ GFCR  NL  AL++ 
Sbjct: 201 IVN-------ALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVF 253

Query: 176 KKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLI 235
             M        +    N  SYSI+I  LC+ G +++A  L  +M  +G  P+    T LI
Sbjct: 254 DVM-----SKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLI 308

Query: 236 HGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLN 295
              C  G  ++   LF EM+  G +PN+ T+ V+ID LC+ GKI EANG+   M++  + 
Sbjct: 309 KALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIF 368

Query: 296 PDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSL 355
           P   TYN+L++GYC  GR+  A E+   M  + CK  V ++N L+ G C++    +A+ L
Sbjct: 369 PSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHL 428

Query: 356 YRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCK 415
            ++++ NG+   +++YN L+ GL + G    A KL   M  +++EPD  T+  +I+  CK
Sbjct: 429 LKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCK 488

Query: 416 NNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNA------------------ 457
                 A     ++              LIDG+CK G+  +A                  
Sbjct: 489 QGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHS 548

Query: 458 -----------------WELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYME 500
                              +  K+ + GLVP+VVTY+ ++ GL R G +  +   L  M+
Sbjct: 549 LNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMK 608

Query: 501 KNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVV 552
            +GC PNV  +  +++G  Q  +  +  +LL  M +    + P+  T++++V
Sbjct: 609 LSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDS--GVSPNHVTYTVMV 658



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 119/429 (27%), Positives = 220/429 (51%), Gaps = 13/429 (3%)

Query: 108 PDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGN 167
           P+ ++ +ILI+       GLC   R++EA  L   M   G +P   TY  LI   C  G 
Sbjct: 264 PNSVSYSILIH-------GLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGL 316

Query: 168 LSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPA 227
           +  A  L  +M+          K N+ +Y+++ID LC++G +++A  +  +M    I P+
Sbjct: 317 IDKAFNLFDEMIPRG------CKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPS 370

Query: 228 VVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLE 287
           V+    LI+G+C  G       L   M     +PN+ TFN +++ LC+ GK  +A  LL+
Sbjct: 371 VITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLK 430

Query: 288 LMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKIL 347
            M+  GL+PD  +YN L+DG C  G ++TA ++  SM+    +   +++  +IN +CK  
Sbjct: 431 RMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQG 490

Query: 348 NVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYN 407
             + A +    ++  G+    +T  TL+ G+ + G+   A  + + +    +     + N
Sbjct: 491 KADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLN 550

Query: 408 ILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQK 467
           +++D L K   V+E + +   +        +  +  L+DGL ++G +  ++ +   +   
Sbjct: 551 VILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLS 610

Query: 468 GLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKV 527
           G +P V  Y+I+I+GLC+ G++E+A   L  M+ +G +PN VT+  ++ G++ N K  + 
Sbjct: 611 GCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRA 670

Query: 528 VELLHKMAE 536
           +E +  M E
Sbjct: 671 LETVRAMVE 679



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 133/496 (26%), Positives = 236/496 (47%), Gaps = 28/496 (5%)

Query: 54  INLNEARYFFGYMTHMQPSPPIS-SFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLT 112
           +NL +A   F  M+      P S S+++L   + +    +       ++   G  P   T
Sbjct: 244 LNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRT 303

Query: 113 LNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVAL 172
             +LI       + LC    I +A  LF  MI  G +P+V TY  LI+G CR G +  A 
Sbjct: 304 YTVLI-------KALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEAN 356

Query: 173 RLHKKMVSGDYENGLISKTNIF----SYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
            + +KMV          K  IF    +Y+ +I+  CK+G V  A EL   M+ R   P V
Sbjct: 357 GVCRKMV----------KDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNV 406

Query: 229 VVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLEL 288
                L+ G C  G   +   L   MLD G  P+++++NV+ID LC+ G +N A  LL  
Sbjct: 407 RTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSS 466

Query: 289 MIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILN 348
           M    + PD  T+ ++++ +C  G+ D A      M  KG     V+   LI+G CK+  
Sbjct: 467 MNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGK 526

Query: 349 VEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNI 408
             +A+ +   ++   +  T  + N +L  L +  +      +  ++    + P + TY  
Sbjct: 527 TRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTT 586

Query: 409 LIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKG 468
           L+DGL ++  +  + ++  +++++     +  +  +I+GLC+ GR++ A +L   +   G
Sbjct: 587 LVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSG 646

Query: 469 LVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGF------LQNN 522
           + P  VTY++M+ G    GKL++A + +  M + G   N   +++L+ GF      + N+
Sbjct: 647 VSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGFVLSQKGIDNS 706

Query: 523 KTSKVVELLHKMAEPE 538
           + S V ++  +  +PE
Sbjct: 707 EESTVSDIALRETDPE 722



 Score =  152 bits (383), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 97/322 (30%), Positives = 162/322 (50%), Gaps = 12/322 (3%)

Query: 246 EVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLM 305
           E +G  + M+D         +  +++ LCK G    A   +  +++ G   D     SL+
Sbjct: 187 EADGFVVGMID---------YRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLL 237

Query: 306 DGYCLVGRIDTAREIFLSMHSK-GCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGV 364
            G+C    +  A ++F  M  +  C    VSY+ILI+G C++  +EEA  L  Q+   G 
Sbjct: 238 LGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGC 297

Query: 365 RQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVK 424
           + +  TY  L+  L   G    A  LFDEM     +P++ TY +LIDGLC++  ++EA  
Sbjct: 298 QPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANG 357

Query: 425 LFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLC 484
           +   +  ++    +  +N LI+G CK GR+  A+EL   + ++   P V T++ ++ GLC
Sbjct: 358 VCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLC 417

Query: 485 RKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPD 544
           R GK  KA   L  M  NG +P++V++N L+ G  +    +   +LL  M     ++ PD
Sbjct: 418 RVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMN--CFDIEPD 475

Query: 545 DTTFSIVVDLLAKDEKYHECSA 566
             TF+ +++   K  K    SA
Sbjct: 476 CLTFTAIINAFCKQGKADVASA 497



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 145/583 (24%), Positives = 241/583 (41%), Gaps = 109/583 (18%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           C  G+I+  +A   F  M      P + ++ +L   + ++   +      RK+V   + P
Sbjct: 312 CDRGLID--KAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFP 369

Query: 109 DFLTLNILINCFGNKER----------------------------GLCVENRIKEATWLF 140
             +T N LIN +    R                            GLC   +  +A  L 
Sbjct: 370 SVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLL 429

Query: 141 KNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIII 200
           K M+  G+ PD+++Y  LI+G CR G+++ A +L   M   D E       +  +++ II
Sbjct: 430 KRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIE------PDCLTFTAII 483

Query: 201 DSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPR 260
           ++ CK+G  D A      M  +GI+   V  TTLI G C  G     + LFI  L+   +
Sbjct: 484 NAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTR--DALFI--LETLVK 539

Query: 261 PNLLT----FNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDT 316
             +LT     NV++D L KG K+ E   +L  + + GL P   TY +L+DG    G I  
Sbjct: 540 MRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITG 599

Query: 317 AREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLS 376
           +  I   M   GC   V  Y I+ING C+   VEEA  L   +  +GV    +TY  ++ 
Sbjct: 600 SFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVK 659

Query: 377 GLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNN------------------- 417
           G    G+   A +    M     E +   Y+ L+ G   +                    
Sbjct: 660 GYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGFVLSQKGIDNSEESTVSDIALRET 719

Query: 418 ---CVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGL----- 469
              C+ E + +    ++     G+ IF  L+  LCK GR D + +L   + ++G+     
Sbjct: 720 DPECINELISVVE--QLGGCISGLCIF--LVTRLCKEGRTDESNDLVQNVLERGVFLEKA 775

Query: 470 -----------------------------VPTVVTYSIMIHGLCRKGKLEKANDFLL-YM 499
                                        VP+  ++ ++I GL ++G  E+A + ++  +
Sbjct: 776 MDIIMESYCSKKKHTKCMELITLVLKSGFVPSFKSFCLVIQGLKKEGDAERARELVMELL 835

Query: 500 EKNGCAPN--VVTF-NTLMHGFLQNNKTSKVVELLHKMAEPER 539
             NG      V+T+   LM G  +    S+V++L+ ++   ER
Sbjct: 836 TSNGVVEKSGVLTYVECLMEGD-ETGDCSEVIDLVDQLHCRER 877



 Score = 99.4 bits (246), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 74/278 (26%), Positives = 119/278 (42%), Gaps = 73/278 (26%)

Query: 352 AMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQ----------------------- 388
           A   YR++ ++G    +I Y T+++ L + G    A+                       
Sbjct: 179 AYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLL 238

Query: 389 ------KLFDEMKLYNV-------EPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFE 435
                  L D +K+++V        P+  +Y+ILI GLC+   ++EA  L   +     +
Sbjct: 239 GFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQ 298

Query: 436 FGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKAN-- 493
                +  LI  LC  G +D A+ LF ++  +G  P V TY+++I GLCR GK+E+AN  
Sbjct: 299 PSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGV 358

Query: 494 ---------------------------------DFLLYMEKNGCAPNVVTFNTLMHGFLQ 520
                                            + L  MEK  C PNV TFN LM G  +
Sbjct: 359 CRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCR 418

Query: 521 NNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKD 558
             K  K V LL +M   +  L PD  ++++++D L ++
Sbjct: 419 VGKPYKAVHLLKRML--DNGLSPDIVSYNVLIDGLCRE 454



 Score = 79.0 bits (193), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 59/227 (25%), Positives = 107/227 (47%), Gaps = 7/227 (3%)

Query: 363 GVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEA 422
           G R     Y++LL  L +      A   +  M+       +  Y  +++ LCKN    EA
Sbjct: 155 GFRLNYPCYSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNG-YTEA 213

Query: 423 VKLFHMLEMNKFEFGIE--IFNCLIDGLCKAGRLDNAWELFHKLPQK-GLVPTVVTYSIM 479
            ++F M ++ K  F ++  I   L+ G C+   L +A ++F  + ++    P  V+YSI+
Sbjct: 214 AEMF-MSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSIL 272

Query: 480 IHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPER 539
           IHGLC  G+LE+A      M + GC P+  T+  L+          K   L  +M    R
Sbjct: 273 IHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMI--PR 330

Query: 540 NLVPDDTTFSIVVDLLAKDEKYHECSAVSKSSYRACLYVTIFQPSSL 586
              P+  T+++++D L +D K  E + V +   +  ++ ++   ++L
Sbjct: 331 GCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNAL 377



 Score = 41.6 bits (96), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 36/180 (20%), Positives = 71/180 (39%), Gaps = 42/180 (23%)

Query: 416 NNCVQEAVKLFHMLEMNKFEFGIEI-FNCLIDGLCKAGRLDN---AWELFHKLPQKGLVP 471
           + C +E +KL +  +  +  FG  + + C    L    +LD    A+  + ++   G V 
Sbjct: 134 SRCEKEMLKLMYCFDELREVFGFRLNYPCYSSLLMSLAKLDLGFLAYVTYRRMEADGFVV 193

Query: 472 TVVTYSIMIHGLCRKGKLEKANDFLLYMEKNG---------------------------- 503
            ++ Y  +++ LC+ G  E A  F+  + K G                            
Sbjct: 194 GMIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVF 253

Query: 504 --------CAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLL 555
                   CAPN V+++ L+HG  +  +  +   L  +M   E+   P   T+++++  L
Sbjct: 254 DVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMG--EKGCQPSTRTYTVLIKAL 311


>gi|297741630|emb|CBI32762.3| unnamed protein product [Vitis vinifera]
          Length = 648

 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 133/435 (30%), Positives = 231/435 (53%), Gaps = 19/435 (4%)

Query: 84  AVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNM 143
           A+ +    D+ + F+R++V++ +     +L I+++       GLC    ++    L   +
Sbjct: 203 ALRRGGQVDSCLRFFRRMVNLDVEVTVYSLTIVLD-------GLCKRGDVEMGRKLMDEV 255

Query: 144 IAFGVRPDVITYGTLINGFCRT---GNLSVALRLHKKMVSGDYENGLISKTNIFSYSIII 200
            A GV+ +V+TY   I G+ +    G ++  L L +K        G+    N+ +Y+++I
Sbjct: 256 AAKGVKANVVTYNAFIEGYFKRLDLGGVAEILTLMEK-------EGV--ACNVVTYTLLI 306

Query: 201 DSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPR 260
                 G +++A+ LF EM+ +GI   V V T++I   C +GN +    LF EM D G  
Sbjct: 307 HGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKGLI 366

Query: 261 PNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREI 320
           P+  T+  +I  +CK G++  A  L+  M  +G++ +   +N+L+DGYC  G +D A  +
Sbjct: 367 PSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRL 426

Query: 321 FLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQ 380
            + M  KG +  V +YN + +G CK+   +EA  L   ++  GV    +++ TL+    +
Sbjct: 427 QVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCK 486

Query: 381 AGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEI 440
            G    A+++F EM+     P++ TYN+LIDG  K   ++EA KL   LE       +  
Sbjct: 487 EGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRGLIPDVYT 546

Query: 441 FNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYME 500
              LI G C  G++D A +LF ++PQ+GLVP VVTY+ MI GL + G+ E+A      M+
Sbjct: 547 CTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEAFKLYDEMK 606

Query: 501 KNGCAPNVVTFNTLM 515
           + G  P+   +++L+
Sbjct: 607 ETGLTPDDTVYSSLV 621



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 140/483 (28%), Positives = 234/483 (48%), Gaps = 16/483 (3%)

Query: 78  FNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEAT 137
           F+LLF   A N+ +   +  +  +   G   D  +  + +       RG  V++ ++   
Sbjct: 162 FDLLFRVYADNKMFGEALEAFEHMEKKGFHIDERSCLVYLLAL---RRGGQVDSCLR--- 215

Query: 138 WLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYS 197
             F+ M+   V   V +   +++G C+ G++ +  +L  ++ +     G+  K N+ +Y+
Sbjct: 216 -FFRRMVNLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAA----KGV--KANVVTYN 268

Query: 198 IIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDL 257
             I+   K   +    E+   M+  G+   VV  T LIHGF   G  EE   LF EM + 
Sbjct: 269 AFIEGYFKRLDLGGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREK 328

Query: 258 GPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTA 317
           G   ++  +  +I C C+ G +  A  L + M  +GL P   TY +L+ G C  G+++ A
Sbjct: 329 GIEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAA 388

Query: 318 REIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSG 377
           + +   M  KG     V +N LI+GYC+   V+EA+ L   +   G+   V  YN++ SG
Sbjct: 389 QMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASG 448

Query: 378 LFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFG 437
           L +  +   A+ L   M    V P+  ++  LID  CK     EA ++F  +E       
Sbjct: 449 LCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPN 508

Query: 438 IEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLL 497
           I  +N LIDG  K G +  A +L  +L  +GL+P V T + +IHG C  GK++ A     
Sbjct: 509 IITYNVLIDGYSKRGNMKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFD 568

Query: 498 YMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVV-DLLA 556
            M + G  PNVVT+  ++ G  ++ ++ +  +L  +M E    L PDDT +S +V  L +
Sbjct: 569 EMPQRGLVPNVVTYTAMISGLSKDGRSEEAFKLYDEMKET--GLTPDDTVYSSLVGSLHS 626

Query: 557 KDE 559
            DE
Sbjct: 627 ADE 629



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 124/430 (28%), Positives = 208/430 (48%), Gaps = 8/430 (1%)

Query: 135 EATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIF 194
           EA   F++M   G   D  +    +    R G +   LR  ++MV+ D E        ++
Sbjct: 177 EALEAFEHMEKKGFHIDERSCLVYLLALRRGGQVDSCLRFFRRMVNLDVE------VTVY 230

Query: 195 SYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEM 254
           S +I++D LCK G V+  ++L  E+  +G+   VV     I G+    +   V  +   M
Sbjct: 231 SLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAEILTLM 290

Query: 255 LDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRI 314
              G   N++T+ ++I      GKI EA  L E M ++G+  D + Y S++   C  G +
Sbjct: 291 EKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNV 350

Query: 315 DTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTL 374
             A  +F  M  KG   +  +Y  LI+G CK   +E A  L  ++   G+    + +NTL
Sbjct: 351 KRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTL 410

Query: 375 LSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKF 434
           + G  ++G    A +L   M+   +E D+  YN +  GLCK N   EA  L   +     
Sbjct: 411 IDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGV 470

Query: 435 EFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKAND 494
                 F  LID  CK G    A  +F ++ +KG VP ++TY+++I G  ++G +++A+ 
Sbjct: 471 SPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHK 530

Query: 495 FLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDL 554
               +E  G  P+V T  +L+HG   + K    ++L  +M  P+R LVP+  T++ ++  
Sbjct: 531 LKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEM--PQRGLVPNVVTYTAMISG 588

Query: 555 LAKDEKYHEC 564
           L+KD +  E 
Sbjct: 589 LSKDGRSEEA 598



 Score =  161 bits (408), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 101/334 (30%), Positives = 169/334 (50%), Gaps = 13/334 (3%)

Query: 51  SGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDF 110
           S I  + EA+  F  M        +  +  +     ++ +    +  + ++   GL+P  
Sbjct: 310 SNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSA 369

Query: 111 LTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSV 170
            T   LI+       G+C   +++ A  L   M   G+  + + + TLI+G+C +G +  
Sbjct: 370 HTYGALIH-------GVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDE 422

Query: 171 ALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVV 230
           ALRL   M     + GL  ++++F+Y+ I   LCK    D+AK L   M  RG++P  + 
Sbjct: 423 ALRLQVVM----EKKGL--ESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMS 476

Query: 231 CTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMI 290
            TTLI  +C  GN+ E   +F EM + G  PN++T+NV+ID   K G + EA+ L + + 
Sbjct: 477 FTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELE 536

Query: 291 QRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVE 350
            RGL PD +T  SL+ G C+ G++D A ++F  M  +G    VV+Y  +I+G  K    E
Sbjct: 537 NRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSE 596

Query: 351 EAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQA 384
           EA  LY ++   G+      Y++L+  L  A ++
Sbjct: 597 EAFKLYDEMKETGLTPDDTVYSSLVGSLHSADES 630


>gi|145360025|ref|NP_179305.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122223754|sp|Q0WPZ6.1|PP158_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g17140
 gi|110737729|dbj|BAF00803.1| hypothetical protein [Arabidopsis thaliana]
 gi|330251496|gb|AEC06590.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 874

 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 165/607 (27%), Positives = 277/607 (45%), Gaps = 72/607 (11%)

Query: 10  LFSSETVSKVKLSSL-------------------FKSPRQIAAVSSPETQLNEFLHENCK 50
           L  S ++ K KLSSL                   F+  R     + P   L   L E+C 
Sbjct: 64  LILSSSIQKTKLSSLLSVVSIFAKSNHIDKAFPQFQLVRSRFPENKPSVYLYNLLLESC- 122

Query: 51  SGIINLNEAR-----YFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIG 105
                + E R     + +  M     +P   +FNLL  A+  +   DA    + ++   G
Sbjct: 123 -----IKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKG 177

Query: 106 LLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRT 165
             P+  T  IL+       RG C      +   L   M +FGV P+ + Y T+++ FCR 
Sbjct: 178 CKPNEFTFGILV-------RGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCRE 230

Query: 166 GNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGI- 224
           G    +    +KMV    E GL+   +I +++  I +LCKEG V  A  +F +M+     
Sbjct: 231 GRNDDS----EKMVEKMREEGLV--PDIVTFNSRISALCKEGKVLDASRIFSDMELDEYL 284

Query: 225 ---NPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINE 281
               P  +    ++ GFC  G  E+   LF  + +     +L ++N+ +  L + GK  E
Sbjct: 285 GLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIE 344

Query: 282 ANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILIN 341
           A  +L+ M  +G+ P  ++YN LMDG C +G +  A+ I   M   G     V+Y  L++
Sbjct: 345 AETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLH 404

Query: 342 GYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEP 401
           GYC +  V+ A SL ++++ N       T N LL  L++ G+   A++L  +M       
Sbjct: 405 GYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGL 464

Query: 402 DLSTYNILIDGLCKNNCVQEAVKLFHMLEM-----------------------NKFEFGI 438
           D  T NI++DGLC +  + +A+++   + +                       N     +
Sbjct: 465 DTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDL 524

Query: 439 EIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLY 498
             ++ L++GLCKAGR   A  LF ++  + L P  V Y+I IH  C++GK+  A   L  
Sbjct: 525 ITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKD 584

Query: 499 MEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKD 558
           MEK GC  ++ T+N+L+ G    N+  ++  L+ +M   E+ + P+  T++  +  L + 
Sbjct: 585 MEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMK--EKGISPNICTYNTAIQYLCEG 642

Query: 559 EKYHECS 565
           EK  + +
Sbjct: 643 EKVEDAT 649



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 136/559 (24%), Positives = 241/559 (43%), Gaps = 59/559 (10%)

Query: 8   RCLFSSETVSKVKLSSLFKSPRQIAAVSSPETQLNEFLHENCKSGIINLNEARYFFGYMT 67
           + L +S   S ++L      PR  +         N  L   CK G+  L +A+  F  + 
Sbjct: 267 KVLDASRIFSDMELDEYLGLPRPNSIT------YNLMLKGFCKVGL--LEDAKTLFESIR 318

Query: 68  HMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGL 127
                  + S+N+    + ++  +    +  +++   G+ P   + NIL++       GL
Sbjct: 319 ENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMD-------GL 371

Query: 128 CVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGL 187
           C    + +A  +   M   GV PD +TYG L++G+C  G +  A  L ++M+  +     
Sbjct: 372 CKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNN----- 426

Query: 188 ISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEE- 246
               N ++ +I++ SL K G + +A+EL  +M  +G     V C  ++ G C +G  ++ 
Sbjct: 427 -CLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKA 485

Query: 247 ---VNGLFIE----MLDLGPR---------------PNLLTFNVMIDCLCKGGKINEANG 284
              V G+ +     + +LG                 P+L+T++ +++ LCK G+  EA  
Sbjct: 486 IEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKN 545

Query: 285 LLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYC 344
           L   M+   L PD   YN  +  +C  G+I +A  +   M  KGC  ++ +YN LI G  
Sbjct: 546 LFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLG 605

Query: 345 KILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLS 404
               + E   L  ++   G+   + TYNT +  L +  +   A  L DEM   N+ P++ 
Sbjct: 606 IKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVF 665

Query: 405 TYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEI-------FNCLIDGLCKAGRLDNA 457
           ++  LI+  CK       V  F M +   FE  + I       ++ + + L  AG+L  A
Sbjct: 666 SFKYLIEAFCK-------VPDFDMAQ-EVFETAVSICGQKEGLYSLMFNELLAAGQLLKA 717

Query: 458 WELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHG 517
            EL   +  +G       Y  ++  LC+K +LE A+  L  M   G   +      ++ G
Sbjct: 718 TELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASGILHKMIDRGYGFDPAALMPVIDG 777

Query: 518 FLQNNKTSKVVELLHKMAE 536
             +     +      KM E
Sbjct: 778 LGKMGNKKEANSFADKMME 796



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 147/605 (24%), Positives = 244/605 (40%), Gaps = 113/605 (18%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CK+G+ +  +       M      P    +N +  +  +    D       K+   GL+P
Sbjct: 193 CKAGLTD--KGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVP 250

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIA---FGV-RPDVITYGTLINGFCR 164
           D +T N  I+        LC E ++ +A+ +F +M      G+ RP+ ITY  ++ GFC+
Sbjct: 251 DIVTFNSRIS-------ALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCK 303

Query: 165 TGNLSVALRLHKKMVSGD----------YENGLISK-------------------TNIFS 195
            G L  A  L + +   D          +  GL+                      +I+S
Sbjct: 304 VGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYS 363

Query: 196 YSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEML 255
           Y+I++D LCK G++  AK +   MK  G+ P  V    L+HG+C  G  +    L  EM+
Sbjct: 364 YNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMM 423

Query: 256 DLGPRPN-----------------------------------LLTFNVMIDCLCKGGKIN 280
                PN                                    +T N+++D LC  G+++
Sbjct: 424 RNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELD 483

Query: 281 EANGLLELM-----------------------IQRGLNPDRFTYNSLMDGYCLVGRIDTA 317
           +A  +++ M                       I+    PD  TY++L++G C  GR   A
Sbjct: 484 KAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEA 543

Query: 318 REIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSG 377
           + +F  M  +  +   V+YNI I+ +CK   +  A  + + +   G  +++ TYN+L+ G
Sbjct: 544 KNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILG 603

Query: 378 LFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFG 437
           L    Q      L DEMK   + P++ TYN  I  LC+   V++A  L   +        
Sbjct: 604 LGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPN 663

Query: 438 IEIFNCLIDGLCKAGRLDNAWELFHKL-----PQKGLVPTVVTYSIMIHGLCRKGKLEKA 492
           +  F  LI+  CK    D A E+F         ++GL      YS+M + L   G+L KA
Sbjct: 664 VFSFKYLIEAFCKVPDFDMAQEVFETAVSICGQKEGL------YSLMFNELLAAGQLLKA 717

Query: 493 NDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVV 552
            + L  +   G       +  L+    + ++      +LHKM   +R    D      V+
Sbjct: 718 TELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASGILHKMI--DRGYGFDPAALMPVI 775

Query: 553 DLLAK 557
           D L K
Sbjct: 776 DGLGK 780



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 115/444 (25%), Positives = 195/444 (43%), Gaps = 29/444 (6%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CK G+  L++A+   G M      P   ++  L          DA  S  ++++    LP
Sbjct: 372 CKLGM--LSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLP 429

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           +  T NIL++        L    RI EA  L + M   G   D +T   +++G C +G L
Sbjct: 430 NAYTCNILLH-------SLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGEL 482

Query: 169 SVA------LRLHKKMVSGDYEN---GLISKT--------NIFSYSIIIDSLCKEGLVDK 211
             A      +R+H     G+  N   GL+  +        ++ +YS +++ LCK G   +
Sbjct: 483 DKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAE 542

Query: 212 AKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMID 271
           AK LF EM G  + P  V     IH FC  G       +  +M   G   +L T+N +I 
Sbjct: 543 AKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLIL 602

Query: 272 CLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKH 331
            L    +I E +GL++ M ++G++P+  TYN+ +   C   +++ A  +   M  K    
Sbjct: 603 GLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAP 662

Query: 332 TVVSYNILINGYCKILNVEEAMSLYRQIIS-NGVRQTVITYNTLLSGLFQAGQAGYAQKL 390
            V S+  LI  +CK+ + + A  ++   +S  G ++ +  Y+ + + L  AGQ   A +L
Sbjct: 663 NVFSFKYLIEAFCKVPDFDMAQEVFETAVSICGQKEGL--YSLMFNELLAAGQLLKATEL 720

Query: 391 FDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCK 450
            + +     E     Y  L++ LCK + ++ A  + H +    + F       +IDGL K
Sbjct: 721 LEAVLDRGFELGTFLYKDLVESLCKKDELEVASGILHKMIDRGYGFDPAALMPVIDGLGK 780

Query: 451 AGRLDNAWELFHKLPQKGLVPTVV 474
            G    A     K+ +   V  V 
Sbjct: 781 MGNKKEANSFADKMMEMASVGEVA 804


>gi|125582553|gb|EAZ23484.1| hypothetical protein OsJ_07180 [Oryza sativa Japonica Group]
          Length = 457

 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 128/416 (30%), Positives = 215/416 (51%), Gaps = 23/416 (5%)

Query: 91  YDAVISFY---------RKLVS-IGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLF 140
           Y+A+++ Y         R+LV+ + + PD  T N LI       RGLC   R   A  + 
Sbjct: 3   YNAMVAGYCGAGQLDAARRLVAEMPVEPDAYTYNTLI-------RGLCGRGRTANALAVL 55

Query: 141 KNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIII 200
             M+     PDV+TY  L+   C+      A++L  +M     + G     +I +Y++++
Sbjct: 56  DEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEM----RDKG--CTPDIVTYNVVV 109

Query: 201 DSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPR 260
           + +C+EG VD A E    +   G  P  V    ++ G C A  WE+   L  EM   G  
Sbjct: 110 NGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCP 169

Query: 261 PNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREI 320
           PN++TFN++I  LC+ G +  A  +LE + + G  P+  +YN L+  +C   ++D A   
Sbjct: 170 PNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAF 229

Query: 321 FLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQ 380
              M S+GC   +VSYN L+   C+   V+ A+ L  Q+   G    +I+YNT++ GL +
Sbjct: 230 LDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTK 289

Query: 381 AGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEI 440
           AG+   A +L +EM    ++PD+ TY+ +  GLC+ + +++A++ F  ++         +
Sbjct: 290 AGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVL 349

Query: 441 FNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFL 496
           +N +I GLCK     +A +LF  +   G +P   TY+I+I GL  +G +++A D L
Sbjct: 350 YNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLL 405



 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 116/409 (28%), Positives = 206/409 (50%), Gaps = 9/409 (2%)

Query: 126 GLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYEN 185
           G C   ++  A  L   M    V PD  TY TLI G C  G  + AL +  +M+      
Sbjct: 9   GYCGAGQLDAARRLVAEM---PVEPDAYTYNTLIRGLCGRGRTANALAVLDEMLRRR--- 62

Query: 186 GLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWE 245
                 ++ +Y+I++++ CK     +A +L  EM+ +G  P +V    +++G C  G  +
Sbjct: 63  ---CVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVD 119

Query: 246 EVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLM 305
           +       +   G  PN +++N+++  LC   +  +A  L+  M Q+G  P+  T+N L+
Sbjct: 120 DAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLI 179

Query: 306 DGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVR 365
              C  G ++ A E+   +   GC    +SYN L++ +CK   +++AM+    ++S G  
Sbjct: 180 SFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCY 239

Query: 366 QTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKL 425
             +++YNTLL+ L ++G+   A +L  ++K     P L +YN +IDGL K    +EA++L
Sbjct: 240 PDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALEL 299

Query: 426 FHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCR 485
            + +     +  I  ++ +  GLC+  R+++A   F K+   G+ P  V Y+ +I GLC+
Sbjct: 300 LNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCK 359

Query: 486 KGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKM 534
           + +   A D   YM  NGC PN  T+  L+ G        +  +LL ++
Sbjct: 360 RRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDEL 408



 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 106/379 (27%), Positives = 190/379 (50%), Gaps = 7/379 (1%)

Query: 194 FSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIE 253
            +Y+ ++   C  G +D A+ L  EM    + P      TLI G C  G       +  E
Sbjct: 1   MAYNAMVAGYCGAGQLDAARRLVAEMP---VEPDAYTYNTLIRGLCGRGRTANALAVLDE 57

Query: 254 MLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGR 313
           ML     P+++T+ ++++  CK     +A  LL+ M  +G  PD  TYN +++G C  GR
Sbjct: 58  MLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGR 117

Query: 314 IDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNT 373
           +D A E   ++ S GC+   VSYNI++ G C     E+A  L  ++   G    V+T+N 
Sbjct: 118 VDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNM 177

Query: 374 LLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNK 433
           L+S L + G    A ++ +++  Y   P+  +YN L+   CK   + +A+    ++    
Sbjct: 178 LISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRG 237

Query: 434 FEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKAN 493
               I  +N L+  LC++G +D A EL H+L  KG  P +++Y+ +I GL + GK ++A 
Sbjct: 238 CYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEAL 297

Query: 494 DFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
           + L  M   G  P+++T++T+  G  + ++    +    K+   +  + P+   ++ ++ 
Sbjct: 298 ELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQ--DMGIRPNTVLYNAIIL 355

Query: 554 LLAKDEKYHECSAVSKSSY 572
            L K  + H  SA+   +Y
Sbjct: 356 GLCKRRETH--SAIDLFAY 372



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 74/282 (26%), Positives = 134/282 (47%), Gaps = 13/282 (4%)

Query: 58  EARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILI 117
           +A    G M      P + +FN+L   + +    +  +    ++   G  P+ L+ N L+
Sbjct: 155 DAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLL 214

Query: 118 NCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKK 177
           + F       C + ++ +A      M++ G  PD+++Y TL+   CR+G + VA+ L  +
Sbjct: 215 HAF-------CKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQ 267

Query: 178 MVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHG 237
           +        LIS      Y+ +ID L K G   +A EL  EM  +G+ P ++  +T+  G
Sbjct: 268 LKDKGCAPVLIS------YNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAG 321

Query: 238 FCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPD 297
            C     E+    F ++ D+G RPN + +N +I  LCK  + + A  L   MI  G  P+
Sbjct: 322 LCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPN 381

Query: 298 RFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNIL 339
             TY  L++G    G I  AR++   + S+  +  ++  +++
Sbjct: 382 ESTYTILIEGLAYEGLIKEARDLLDELCSRAGEEILLDVHLI 423



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 89/355 (25%), Positives = 158/355 (44%), Gaps = 38/355 (10%)

Query: 44  FLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVS 103
            L   CK       +A      M     +P I ++N++   + +    D  I F + L S
Sbjct: 73  LLEATCKRS--GYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPS 130

Query: 104 IGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFC 163
            G  P+ ++ NI++       +GLC   R ++A  L   M   G  P+V+T+  LI+  C
Sbjct: 131 YGCEPNTVSYNIVL-------KGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLC 183

Query: 164 RTGNLSVALRL-------------------------HKKMVSG-DYENGLISK---TNIF 194
           R G +  AL +                          KKM     + + ++S+    +I 
Sbjct: 184 RKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIV 243

Query: 195 SYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEM 254
           SY+ ++ +LC+ G VD A EL  ++K +G  P ++   T+I G   AG  +E   L  EM
Sbjct: 244 SYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEM 303

Query: 255 LDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRI 314
           +  G +P+++T++ +   LC+  +I +A      +   G+ P+   YN+++ G C     
Sbjct: 304 VSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRET 363

Query: 315 DTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVI 369
            +A ++F  M   GC     +Y ILI G      ++EA  L  ++ S    + ++
Sbjct: 364 HSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSRAGEEILL 418


>gi|297838419|ref|XP_002887091.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297332932|gb|EFH63350.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 568

 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 120/376 (31%), Positives = 199/376 (52%), Gaps = 2/376 (0%)

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
           +++S+ I+I   C+ G ++K+ +L +E++  G +P VV+ TTLI G C  G  E+   LF
Sbjct: 162 DVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKRGEIEKAKDLF 221

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
            EM   G   N  T+ V+I  L K G   +   + E M + G+ P+ +TYN +M+ +C  
Sbjct: 222 FEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEDGVFPNLYTYNCVMNQHCKD 281

Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
           GR   A ++F  M  +G    +V+YN LI G C+ +   EA  +  Q+ S+G+   +ITY
Sbjct: 282 GRTKDAFKLFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSDGINPNLITY 341

Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
           NTL+ G    G+ G A  L  ++K   + P L TYNIL+ G CK      A K+   +E 
Sbjct: 342 NTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEE 401

Query: 432 NKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEK 491
              +     +  LID   +   ++ A +L   + + GL P V TYS++IHG C KG++ +
Sbjct: 402 RGIKPSKITYTILIDTFARMDNMEKAIQLRSPMEELGLTPDVHTYSVLIHGFCIKGQMNE 461

Query: 492 ANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIV 551
           A+     M      PN V +NT++ G+ +   + + + L  +M E E  L P+  ++  +
Sbjct: 462 ASRLFKLMVAKKLEPNKVIYNTMVLGYCKEGSSYRALRLFREMEEKE--LPPNVASYRYM 519

Query: 552 VDLLAKDEKYHECSAV 567
           +++L K+ K  E   +
Sbjct: 520 IEVLCKERKSKEAEGL 535



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 136/488 (27%), Positives = 244/488 (50%), Gaps = 17/488 (3%)

Query: 65  YMTHMQPSPPISS-FNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNK 123
           Y+T  + S   S  + ++  A  +++  D+ IS++ ++V  G +P         NCF N 
Sbjct: 83  YVTESETSETKSRLYEVMINAYVQSQSLDSSISYFNEMVDKGFVPG-------SNCFNNL 135

Query: 124 ERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDY 183
                V +      W F N     V  DV ++G +I G C  G +  +  L  ++    +
Sbjct: 136 -LTFVVGSSSFNQWWRFFNESKIKVDLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGF 194

Query: 184 ENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGN 243
                   N+  Y+ +ID  CK G ++KAK+LF EM   G+       T LIHG    G 
Sbjct: 195 S------PNVVIYTTLIDGCCKRGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGI 248

Query: 244 WEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNS 303
            ++   ++ +M + G  PNL T+N +++  CK G+  +A  L + M +RG++ +  TYN+
Sbjct: 249 KKQGFEMYEKMQEDGVFPNLYTYNCVMNQHCKDGRTKDAFKLFDEMRERGVSCNIVTYNT 308

Query: 304 LMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNG 363
           L+ G C   + + A ++   M S G    +++YN LI+G+C +  + +A+SL R + S G
Sbjct: 309 LIGGLCREMKANEANKVMDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRG 368

Query: 364 VRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAV 423
           +  +++TYN L+SG  + G    A K+  EM+   ++P   TY ILID   + + +++A+
Sbjct: 369 LSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKITYTILIDTFARMDNMEKAI 428

Query: 424 KLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGL 483
           +L   +E       +  ++ LI G C  G+++ A  LF  +  K L P  V Y+ M+ G 
Sbjct: 429 QLRSPMEELGLTPDVHTYSVLIHGFCIKGQMNEASRLFKLMVAKKLEPNKVIYNTMVLGY 488

Query: 484 CRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVP 543
           C++G   +A      ME+    PNV ++  ++    +  K+ +   L+ KM +    + P
Sbjct: 489 CKEGSSYRALRLFREMEEKELPPNVASYRYMIEVLCKERKSKEAEGLVEKMIDT--GIDP 546

Query: 544 DDTTFSIV 551
            D+  +++
Sbjct: 547 SDSILNLI 554


>gi|357474081|ref|XP_003607325.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355508380|gb|AES89522.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 834

 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 148/563 (26%), Positives = 270/563 (47%), Gaps = 72/563 (12%)

Query: 54  INLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTL 113
           ++LN A      M      P   ++  +  A  K  ++   +    ++VS+GL  + +  
Sbjct: 269 LDLNLACELLKEMREFGWVPSKGTYTAVIVACVKQGNFVEALRLKDEMVSVGLPMNVIVT 328

Query: 114 NILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALR 173
             L+       +G CV   +  A  LF  ++  GV PDV+ +  LING  + G++  A  
Sbjct: 329 RSLM-------KGYCVLGDVNLALQLFDEVVEGGVVPDVVIFSVLINGCSKVGDMEKAYE 381

Query: 174 LHKKM---------------VSGDYENGLISK-------------TNIFSYSIIIDSLCK 205
           L+ +M               + G +E  L+               TN+ +Y+I++  L +
Sbjct: 382 LYTRMKLMGIQPNVFIVNSLLEGFHEQNLLEHAYGLFDEAVEHGITNVVTYNILLKWLGE 441

Query: 206 EGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLT 265
            G V++A  L+ +M  +GI P++V    LI G C  G  ++   +   +L+ G +PN +T
Sbjct: 442 LGKVNEACNLWEKMVSKGITPSLVSYNNLILGHCKKGCMDKAYSMLKSILERGLKPNAVT 501

Query: 266 FNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMH 325
           + ++ID   K G    A  + E M+   + P   T+N++++G    GR+   ++   +  
Sbjct: 502 YTLLIDGFFKKGDSERAFVVFEQMMAANIAPTDHTFNTVINGLGKTGRVSETQDKLNNFI 561

Query: 326 SKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAG 385
            +G   T ++YN +I+G+ K   V+ A+  YR++  +G+   VITY +L+ GL ++ + G
Sbjct: 562 KQGFVSTSITYNSIIDGFFKEGAVDSALLAYREMCESGISPDVITYTSLIDGLCKSNKIG 621

Query: 386 YAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLF------------------- 426
            A ++  +MK   ++ D+  Y+ LIDG CK + ++ A K F                   
Sbjct: 622 LALEMHSDMKYKGMKLDVVAYSALIDGFCKMHDMESASKFFTELLDIGLTPNTVVYNSMI 681

Query: 427 ----HMLEM------------NKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLV 470
               H+  M            NK    ++++  +I GL K G+L  A +L+ ++  K +V
Sbjct: 682 SGFIHLNNMEAALNLHQEMIKNKVPCDLQVYTSIIGGLLKEGKLSLALDLYSEMLSKDIV 741

Query: 471 PTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVEL 530
           P +V Y+++I+GL   G+LE A+  L  M+ N   P+V+ +N L+ G  +     +   L
Sbjct: 742 PDIVMYTVLINGLSNNGQLENASKILKEMDGNNITPSVLVYNILIAGNFREGNLQEAFRL 801

Query: 531 LHKMAEPERNLVPDDTTFSIVVD 553
             +M   ++ LVPDDTT+ I+V+
Sbjct: 802 HDEML--DKGLVPDDTTYDILVN 822



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 159/600 (26%), Positives = 262/600 (43%), Gaps = 115/600 (19%)

Query: 71  PSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVE 130
           P  PI + NLL   V +N   DA    Y ++V  G+  D  TL++++       R    E
Sbjct: 183 PWVPIMN-NLLTAMVRRNMVCDAR-QLYDEMVERGIYGDCYTLHVVM-------RACMKE 233

Query: 131 NRIKEATWLFKNMIAFGVRPDVITYGTLINGFCR-------------------------- 164
            + +E    FK     G+  D   Y  L+   CR                          
Sbjct: 234 GKFEEVEKFFKEAKGRGLEVDAAAYSILVQAVCRRLDLNLACELLKEMREFGWVPSKGTY 293

Query: 165 ---------TGNLSVALRLHKKMVS--------------------GD-----------YE 184
                     GN   ALRL  +MVS                    GD            E
Sbjct: 294 TAVIVACVKQGNFVEALRLKDEMVSVGLPMNVIVTRSLMKGYCVLGDVNLALQLFDEVVE 353

Query: 185 NGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNW 244
            G++    IF  S++I+   K G ++KA EL+  MK  GI P V +  +L+ GF      
Sbjct: 354 GGVVPDVVIF--SVLINGCSKVGDMEKAYELYTRMKLMGIQPNVFIVNSLLEGFHEQNLL 411

Query: 245 EEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSL 304
           E   GLF E ++ G   N++T+N+++  L + GK+NEA  L E M+ +G+ P   +YN+L
Sbjct: 412 EHAYGLFDEAVEHGI-TNVVTYNILLKWLGELGKVNEACNLWEKMVSKGITPSLVSYNNL 470

Query: 305 MDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQI----- 359
           + G+C  G +D A  +  S+  +G K   V+Y +LI+G+ K  + E A  ++ Q+     
Sbjct: 471 ILGHCKKGCMDKAYSMLKSILERGLKPNAVTYTLLIDGFFKKGDSERAFVVFEQMMAANI 530

Query: 360 ------------------------------ISNGVRQTVITYNTLLSGLFQAGQAGYAQK 389
                                         I  G   T ITYN+++ G F+ G    A  
Sbjct: 531 APTDHTFNTVINGLGKTGRVSETQDKLNNFIKQGFVSTSITYNSIIDGFFKEGAVDSALL 590

Query: 390 LFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLC 449
            + EM    + PD+ TY  LIDGLCK+N +  A+++   ++    +  +  ++ LIDG C
Sbjct: 591 AYREMCESGISPDVITYTSLIDGLCKSNKIGLALEMHSDMKYKGMKLDVVAYSALIDGFC 650

Query: 450 KAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVV 509
           K   +++A + F +L   GL P  V Y+ MI G      +E A +    M KN    ++ 
Sbjct: 651 KMHDMESASKFFTELLDIGLTPNTVVYNSMISGFIHLNNMEAALNLHQEMIKNKVPCDLQ 710

Query: 510 TFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSK 569
            + +++ G L+  K S  ++L  +M    +++VPD   ++++++ L+ + +    S + K
Sbjct: 711 VYTSIIGGLLKEGKLSLALDLYSEML--SKDIVPDIVMYTVLINGLSNNGQLENASKILK 768



 Score =  188 bits (477), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 135/488 (27%), Positives = 234/488 (47%), Gaps = 15/488 (3%)

Query: 37  PETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVIS 96
           P+  +   L   C S + ++ +A   +  M  M   P +   N L     +    +    
Sbjct: 358 PDVVIFSVLINGC-SKVGDMEKAYELYTRMKLMGIQPNVFIVNSLLEGFHEQNLLEHAYG 416

Query: 97  FYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYG 156
            + + V  G+  + +T NIL+   G  E G     ++ EA  L++ M++ G+ P +++Y 
Sbjct: 417 LFDEAVEHGI-TNVVTYNILLKWLG--ELG-----KVNEACNLWEKMVSKGITPSLVSYN 468

Query: 157 TLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELF 216
            LI G C+ G +  A  + K ++    E GL  K N  +Y+++ID   K+G  ++A  +F
Sbjct: 469 NLILGHCKKGCMDKAYSMLKSIL----ERGL--KPNAVTYTLLIDGFFKKGDSERAFVVF 522

Query: 217 LEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKG 276
            +M    I P      T+I+G    G   E        +  G     +T+N +ID   K 
Sbjct: 523 EQMMAANIAPTDHTFNTVINGLGKTGRVSETQDKLNNFIKQGFVSTSITYNSIIDGFFKE 582

Query: 277 GKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSY 336
           G ++ A      M + G++PD  TY SL+DG C   +I  A E+   M  KG K  VV+Y
Sbjct: 583 GAVDSALLAYREMCESGISPDVITYTSLIDGLCKSNKIGLALEMHSDMKYKGMKLDVVAY 642

Query: 337 NILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKL 396
           + LI+G+CK+ ++E A   + +++  G+    + YN+++SG         A  L  EM  
Sbjct: 643 SALIDGFCKMHDMESASKFFTELLDIGLTPNTVVYNSMISGFIHLNNMEAALNLHQEMIK 702

Query: 397 YNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDN 456
             V  DL  Y  +I GL K   +  A+ L+  +        I ++  LI+GL   G+L+N
Sbjct: 703 NKVPCDLQVYTSIIGGLLKEGKLSLALDLYSEMLSKDIVPDIVMYTVLINGLSNNGQLEN 762

Query: 457 AWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMH 516
           A ++  ++    + P+V+ Y+I+I G  R+G L++A      M   G  P+  T++ L++
Sbjct: 763 ASKILKEMDGNNITPSVLVYNILIAGNFREGNLQEAFRLHDEMLDKGLVPDDTTYDILVN 822

Query: 517 GFLQNNKT 524
           G L+ + T
Sbjct: 823 GKLKVSHT 830



 Score =  129 bits (323), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 104/418 (24%), Positives = 186/418 (44%), Gaps = 40/418 (9%)

Query: 180 SGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFC 239
           SG Y  G  S + +F+Y  ++ S  +   +  A E F  M    + P V +   L+    
Sbjct: 141 SGRY--GFESDSRVFNY--LLKSFVRVNKITDAVECFRTMLEHDLVPWVPIMNNLLTAMV 196

Query: 240 CAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRF 299
                 +   L+ EM++ G   +  T +V++    K GK  E     +    RGL  D  
Sbjct: 197 RRNMVCDARQLYDEMVERGIYGDCYTLHVVMRACMKEGKFEEVEKFFKEAKGRGLEVDAA 256

Query: 300 TYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQI 359
            Y+ L+   C    ++ A E+   M   G   +  +Y  +I    K  N  EA+ L  ++
Sbjct: 257 AYSILVQAVCRRLDLNLACELLKEMREFGWVPSKGTYTAVIVACVKQGNFVEALRLKDEM 316

Query: 360 ISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCV 419
           +S G+   VI   +L+ G    G    A +LFDE+    V PD+  +++LI+G  K   +
Sbjct: 317 VSVGLPMNVIVTRSLMKGYCVLGDVNLALQLFDEVVEGGVVPDVVIFSVLINGCSKVGDM 376

Query: 420 QEAVKLFHMLEMNKFEFGIEIFNCLIDG-------------------------------- 447
           ++A +L+  +++   +  + I N L++G                                
Sbjct: 377 EKAYELYTRMKLMGIQPNVFIVNSLLEGFHEQNLLEHAYGLFDEAVEHGITNVVTYNILL 436

Query: 448 --LCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCA 505
             L + G+++ A  L+ K+  KG+ P++V+Y+ +I G C+KG ++KA   L  + + G  
Sbjct: 437 KWLGELGKVNEACNLWEKMVSKGITPSLVSYNNLILGHCKKGCMDKAYSMLKSILERGLK 496

Query: 506 PNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
           PN VT+  L+ GF +   + +   +  +M     N+ P D TF+ V++ L K  +  E
Sbjct: 497 PNAVTYTLLIDGFFKKGDSERAFVVFEQMMAA--NIAPTDHTFNTVINGLGKTGRVSE 552



 Score = 89.4 bits (220), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 74/315 (23%), Positives = 134/315 (42%), Gaps = 38/315 (12%)

Query: 285 LLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYC 344
           LLE   + G   D   +N L+  +  V +I  A E F +M        V   N L+    
Sbjct: 137 LLECSGRYGFESDSRVFNYLLKSFVRVNKITDAVECFRTMLEHDLVPWVPIMNNLLTAMV 196

Query: 345 KILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLS 404
           +   V +A  LY +++  G+     T + ++    + G+    +K F E K   +E D +
Sbjct: 197 RRNMVCDARQLYDEMVERGIYGDCYTLHVVMRACMKEGKFEEVEKFFKEAKGRGLEVDAA 256

Query: 405 TYNILIDGLCKN------------------------------NCVQ-----EAVKLFHML 429
            Y+IL+  +C+                                CV+     EA++L   +
Sbjct: 257 AYSILVQAVCRRLDLNLACELLKEMREFGWVPSKGTYTAVIVACVKQGNFVEALRLKDEM 316

Query: 430 EMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKL 489
                   + +   L+ G C  G ++ A +LF ++ + G+VP VV +S++I+G  + G +
Sbjct: 317 VSVGLPMNVIVTRSLMKGYCVLGDVNLALQLFDEVVEGGVVPDVVIFSVLINGCSKVGDM 376

Query: 490 EKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFS 549
           EKA +    M+  G  PNV   N+L+ GF + N       L  +  E   + + +  T++
Sbjct: 377 EKAYELYTRMKLMGIQPNVFIVNSLLEGFHEQNLLEHAYGLFDEAVE---HGITNVVTYN 433

Query: 550 IVVDLLAKDEKYHEC 564
           I++  L +  K +E 
Sbjct: 434 ILLKWLGELGKVNEA 448


>gi|326510087|dbj|BAJ87260.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326520816|dbj|BAJ92771.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 1092

 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 137/488 (28%), Positives = 253/488 (51%), Gaps = 15/488 (3%)

Query: 77  SFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEA 136
           ++N L   + K+      +  Y+ + + G++P   T ++L+  FG +     V       
Sbjct: 173 TYNGLIYFLVKSGFDREAMDVYKAMAADGVVPTVRTYSVLMLAFGKRRDAETV------- 225

Query: 137 TWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSY 196
             L   M A GVRP+V +Y   I    + G L  A R+ +KM     E G   K ++ + 
Sbjct: 226 VGLLGEMEARGVRPNVYSYTICIRVLGQAGRLEEAYRILRKM----EEEG--CKPDVVTN 279

Query: 197 SIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLD 256
           +++I  LC  G +  AK++F +MK     P  V   TL+     +G+   V+ ++  +  
Sbjct: 280 TVLIQILCDAGRLADAKDVFWKMKASDQKPDRVTYITLLDKCGDSGDSRSVSEIWNALKA 339

Query: 257 LGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDT 316
            G   N++++   +D LC+ G+++EA  + + M Q+G+ P +++YNSL+ G+    R + 
Sbjct: 340 DGYNDNVVSYTAAVDALCQVGRVDEALDVFDEMKQKGIIPQQYSYNSLISGFLKADRFNR 399

Query: 317 AREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLS 376
           A E+F  M+  G      ++ + IN + K     +A+  Y  + S G+   V+  N +L 
Sbjct: 400 ALELFNHMNIHGPTPNGYTHVLFINYHGKSGESLKALKRYELMKSKGIVPDVVAGNAVLY 459

Query: 377 GLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEF 436
           GL + G+ G A+++F E+K   + PD  TY ++I    K +   EA+K+F  +  N+   
Sbjct: 460 GLAKTGRLGMAKRVFHELKAMGISPDNITYTMMIKCCSKASNADEAMKIFAEMIENRCAP 519

Query: 437 GIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFL 496
            +   N LID L KAGR + AW++F++L +  L PT  TY+ ++ GL R+GK+++    L
Sbjct: 520 DVLAMNSLIDMLYKAGRGNEAWKIFYELKEMNLEPTDCTYNTLLAGLGREGKVKEVMQLL 579

Query: 497 LYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLA 556
             M  N   PN++T+NT++    +N + +  +++L+ M       +PD ++++ V+  L 
Sbjct: 580 EGMNSNSFPPNIITYNTVLDCLCKNGEVNYALDMLYSMT--MNGCMPDLSSYNTVMYGLV 637

Query: 557 KDEKYHEC 564
           K+++  E 
Sbjct: 638 KEDRLDEA 645



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 136/516 (26%), Positives = 250/516 (48%), Gaps = 39/516 (7%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
           P + ++++L  A  K R  + V+    ++ + G+ P+  +  I I   G          R
Sbjct: 204 PTVRTYSVLMLAFGKRRDAETVVGLLGEMEARGVRPNVYSYTICIRVLGQA-------GR 256

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLIS--- 189
           ++EA  + + M   G +PDV+T   LI   C  G L+ A  +  KM + D +   ++   
Sbjct: 257 LEEAYRILRKMEEEGCKPDVVTNTVLIQILCDAGRLADAKDVFWKMKASDQKPDRVTYIT 316

Query: 190 --------------------------KTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRG 223
                                       N+ SY+  +D+LC+ G VD+A ++F EMK +G
Sbjct: 317 LLDKCGDSGDSRSVSEIWNALKADGYNDNVVSYTAAVDALCQVGRVDEALDVFDEMKQKG 376

Query: 224 INPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEAN 283
           I P      +LI GF  A  +     LF  M   GP PN  T  + I+   K G+  +A 
Sbjct: 377 IIPQQYSYNSLISGFLKADRFNRALELFNHMNIHGPTPNGYTHVLFINYHGKSGESLKAL 436

Query: 284 GLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGY 343
              ELM  +G+ PD    N+++ G    GR+  A+ +F  + + G     ++Y ++I   
Sbjct: 437 KRYELMKSKGIVPDVVAGNAVLYGLAKTGRLGMAKRVFHELKAMGISPDNITYTMMIKCC 496

Query: 344 CKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDL 403
            K  N +EAM ++ ++I N     V+  N+L+  L++AG+   A K+F E+K  N+EP  
Sbjct: 497 SKASNADEAMKIFAEMIENRCAPDVLAMNSLIDMLYKAGRGNEAWKIFYELKEMNLEPTD 556

Query: 404 STYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHK 463
            TYN L+ GL +   V+E ++L   +  N F   I  +N ++D LCK G ++ A ++ + 
Sbjct: 557 CTYNTLLAGLGREGKVKEVMQLLEGMNSNSFPPNIITYNTVLDCLCKNGEVNYALDMLYS 616

Query: 464 LPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYME-KNGCAPNVVTFNTLMHGFLQNN 522
           +   G +P + +Y+ +++GL ++ +L++A  F ++ + K   AP+  T  T++  F+++ 
Sbjct: 617 MTMNGCMPDLSSYNTVMYGLVKEDRLDEA--FWMFCQMKKVLAPDYATVCTILPSFVRSG 674

Query: 523 KTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKD 558
              + +  + +      + V   +  S++  +L +D
Sbjct: 675 LMKEALHTVREYILQPDSKVDRSSVHSLMEGILKRD 710



 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 138/470 (29%), Positives = 229/470 (48%), Gaps = 19/470 (4%)

Query: 73   PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
            P I ++N +   + KN   +  +     +   G +PD  + N ++        GL  E+R
Sbjct: 589  PNIITYNTVLDCLCKNGEVNYALDMLYSMTMNGCMPDLSSYNTVM-------YGLVKEDR 641

Query: 133  IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALR-LHKKMVSGDYENGLISKT 191
            + EA W+F  M    + PD  T  T++  F R+G +  AL  + + ++  D      SK 
Sbjct: 642  LDEAFWMFCQMKKV-LAPDYATVCTILPSFVRSGLMKEALHTVREYILQPD------SKV 694

Query: 192  NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
            +  S   +++ + K    +K+ E    +   G+    +  + +I   C        + L 
Sbjct: 695  DRSSVHSLMEGILKRDGTEKSIEFAENIASSGLLLDDLFLSPIIRHLCKHKEALAAHELV 754

Query: 252  IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
             +  +LG      ++N +I  L     I+ A  L   M + G +PD FTY+ ++D     
Sbjct: 755  KKFENLGVSLKTGSYNALICGLVDEDLIDIAEELFSEMKRLGCDPDEFTYHLILDAMGKS 814

Query: 312  GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
             RI+   +I   MH+KG K T V+YN +I+G  K   ++EA++LY Q++S G   T  TY
Sbjct: 815  MRIEDMLKIQEEMHNKGYKSTYVTYNTIISGLVKSKMLDEAINLYYQLMSEGFSPTPCTY 874

Query: 372  NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
              LL GL + G    A+ LFDEM     EP+ + YNIL++G       ++  +LF  +  
Sbjct: 875  GPLLDGLLKDGNIEDAEALFDEMLECGCEPNCAIYNILLNGYRIAGDTEKVCELFESMVE 934

Query: 432  NKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEK 491
                  I+ +  +ID LC  GRL++    F +L   GL P ++TY+++IHGL + G+LE+
Sbjct: 935  QGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDLITYNLLIHGLGKSGRLEE 994

Query: 492  ANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKV----VELLHKMAEP 537
            A      MEK G APN+ T+N+L+    +  K ++      ELL K  +P
Sbjct: 995  ALSLYNDMEKKGIAPNLYTYNSLILYLGKAGKAAEAGKMYEELLAKGWKP 1044



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 133/561 (23%), Positives = 251/561 (44%), Gaps = 70/561 (12%)

Query: 49   CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
            C S   N +EA   F  M   + +P + + N L   + K    +     + +L  + L P
Sbjct: 495  CCSKASNADEAMKIFAEMIENRCAPDVLAMNSLIDMLYKAGRGNEAWKIFYELKEMNLEP 554

Query: 109  DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
               T N L+        GL  E ++KE   L + M +    P++ITY T+++  C+ G +
Sbjct: 555  TDCTYNTLL-------AGLGREGKVKEVMQLLEGMNSNSFPPNIITYNTVLDCLCKNGEV 607

Query: 169  SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
            + AL +   M      NG +   ++ SY+ ++  L KE  +D+A  +F +MK + + P  
Sbjct: 608  NYALDMLYSMTM----NGCMP--DLSSYNTVMYGLVKEDRLDEAFWMFCQMK-KVLAPDY 660

Query: 229  VVCTTLIHGFCCAGNWEEV----------------------------------------- 247
                T++  F  +G  +E                                          
Sbjct: 661  ATVCTILPSFVRSGLMKEALHTVREYILQPDSKVDRSSVHSLMEGILKRDGTEKSIEFAE 720

Query: 248  ----NGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNS 303
                +GL ++ L L P         +I  LCK  +   A+ L++     G++    +YN+
Sbjct: 721  NIASSGLLLDDLFLSP---------IIRHLCKHKEALAAHELVKKFENLGVSLKTGSYNA 771

Query: 304  LMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNG 363
            L+ G      ID A E+F  M   GC     +Y+++++   K + +E+ + +  ++ + G
Sbjct: 772  LICGLVDEDLIDIAEELFSEMKRLGCDPDEFTYHLILDAMGKSMRIEDMLKIQEEMHNKG 831

Query: 364  VRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAV 423
             + T +TYNT++SGL ++     A  L+ ++      P   TY  L+DGL K+  +++A 
Sbjct: 832  YKSTYVTYNTIISGLVKSKMLDEAINLYYQLMSEGFSPTPCTYGPLLDGLLKDGNIEDAE 891

Query: 424  KLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGL 483
             LF  +     E    I+N L++G   AG  +   ELF  + ++G+ P + +Y+++I  L
Sbjct: 892  ALFDEMLECGCEPNCAIYNILLNGYRIAGDTEKVCELFESMVEQGMNPDIKSYTVVIDTL 951

Query: 484  CRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVP 543
            C  G+L     +   +   G  P+++T+N L+HG  ++ +  + + L + M   ++ + P
Sbjct: 952  CADGRLNDGLSYFKQLTDMGLEPDLITYNLLIHGLGKSGRLEEALSLYNDME--KKGIAP 1009

Query: 544  DDTTFSIVVDLLAKDEKYHEC 564
            +  T++ ++  L K  K  E 
Sbjct: 1010 NLYTYNSLILYLGKAGKAAEA 1030



 Score =  158 bits (400), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 135/501 (26%), Positives = 222/501 (44%), Gaps = 40/501 (7%)

Query: 49   CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
            CK+G +N   A      MT     P +SS+N +   + K    D     + ++  + L P
Sbjct: 602  CKNGEVNY--ALDMLYSMTMNGCMPDLSSYNTVMYGLVKEDRLDEAFWMFCQMKKV-LAP 658

Query: 109  DFLTLNILINCFGN----KE-------------------------RGLCVENRIKEATWL 139
            D+ T+  ++  F      KE                          G+   +  +++   
Sbjct: 659  DYATVCTILPSFVRSGLMKEALHTVREYILQPDSKVDRSSVHSLMEGILKRDGTEKSIEF 718

Query: 140  FKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYEN-GLISKTNIFSYSI 198
             +N+ + G+  D +    +I   C+      A  L KK     +EN G+  KT   SY+ 
Sbjct: 719  AENIASSGLLLDDLFLSPIIRHLCKHKEALAAHELVKK-----FENLGVSLKTG--SYNA 771

Query: 199  IIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLG 258
            +I  L  E L+D A+ELF EMK  G +P       ++     +   E++  +  EM + G
Sbjct: 772  LICGLVDEDLIDIAEELFSEMKRLGCDPDEFTYHLILDAMGKSMRIEDMLKIQEEMHNKG 831

Query: 259  PRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAR 318
             +   +T+N +I  L K   ++EA  L   ++  G +P   TY  L+DG    G I+ A 
Sbjct: 832  YKSTYVTYNTIISGLVKSKMLDEAINLYYQLMSEGFSPTPCTYGPLLDGLLKDGNIEDAE 891

Query: 319  EIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGL 378
             +F  M   GC+     YNIL+NGY    + E+   L+  ++  G+   + +Y  ++  L
Sbjct: 892  ALFDEMLECGCEPNCAIYNILLNGYRIAGDTEKVCELFESMVEQGMNPDIKSYTVVIDTL 951

Query: 379  FQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGI 438
               G+       F ++    +EPDL TYN+LI GL K+  ++EA+ L++ +E       +
Sbjct: 952  CADGRLNDGLSYFKQLTDMGLEPDLITYNLLIHGLGKSGRLEEALSLYNDMEKKGIAPNL 1011

Query: 439  EIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLY 498
              +N LI  L KAG+   A +++ +L  KG  P V TY+ +I G    G  E A      
Sbjct: 1012 YTYNSLILYLGKAGKAAEAGKMYEELLAKGWKPNVFTYNALIRGYSVSGSPENAFAAYGR 1071

Query: 499  MEKNGCAPNVVTFNTLMHGFL 519
            M   GC PN  T+  L +  L
Sbjct: 1072 MIVGGCRPNSSTYMQLPNQML 1092



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 92/410 (22%), Positives = 178/410 (43%), Gaps = 11/410 (2%)

Query: 158 LINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFL 217
           L+    R G+++    L ++          I K N+ ++  +  ++  EG +  A     
Sbjct: 110 LMRAHGRVGDVAQVFDLMQRQ---------IIKANVGTFCTVFGAVGVEGGLRSAPVALP 160

Query: 218 EMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGG 277
            MK  GI         LI+    +G   E   ++  M   G  P + T++V++    K  
Sbjct: 161 VMKEAGIVLNAYTYNGLIYFLVKSGFDREAMDVYKAMAADGVVPTVRTYSVLMLAFGKRR 220

Query: 278 KINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYN 337
                 GLL  M  RG+ P+ ++Y   +      GR++ A  I   M  +GCK  VV+  
Sbjct: 221 DAETVVGLLGEMEARGVRPNVYSYTICIRVLGQAGRLEEAYRILRKMEEEGCKPDVVTNT 280

Query: 338 ILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLY 397
           +LI   C    + +A  ++ ++ ++  +   +TY TLL     +G +    ++++ +K  
Sbjct: 281 VLIQILCDAGRLADAKDVFWKMKASDQKPDRVTYITLLDKCGDSGDSRSVSEIWNALKAD 340

Query: 398 NVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNA 457
               ++ +Y   +D LC+   V EA+ +F  ++          +N LI G  KA R + A
Sbjct: 341 GYNDNVVSYTAAVDALCQVGRVDEALDVFDEMKQKGIIPQQYSYNSLISGFLKADRFNRA 400

Query: 458 WELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHG 517
            ELF+ +   G  P   T+ + I+   + G+  KA      M+  G  P+VV  N +++G
Sbjct: 401 LELFNHMNIHGPTPNGYTHVLFINYHGKSGESLKALKRYELMKSKGIVPDVVAGNAVLYG 460

Query: 518 FLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAV 567
             +  +      + H++      + PD+ T+++++   +K     E   +
Sbjct: 461 LAKTGRLGMAKRVFHELK--AMGISPDNITYTMMIKCCSKASNADEAMKI 508



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 90/371 (24%), Positives = 167/371 (45%), Gaps = 9/371 (2%)

Query: 207 GLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTF 266
           G V    ++F  M+ + I   V    T+       G           M + G   N  T+
Sbjct: 115 GRVGDVAQVFDLMQRQIIKANVGTFCTVFGAVGVEGGLRSAPVALPVMKEAGIVLNAYTY 174

Query: 267 NVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHS 326
           N +I  L K G   EA  + + M   G+ P   TY+ LM  +      +T   +   M +
Sbjct: 175 NGLIYFLVKSGFDREAMDVYKAMAADGVVPTVRTYSVLMLAFGKRRDAETVVGLLGEMEA 234

Query: 327 KGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGY 386
           +G +  V SY I I    +   +EEA  + R++   G +  V+T   L+  L  AG+   
Sbjct: 235 RGVRPNVYSYTICIRVLGQAGRLEEAYRILRKMEEEGCKPDVVTNTVLIQILCDAGRLAD 294

Query: 387 AQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLID 446
           A+ +F +MK  + +PD  TY  L+D    +   +   ++++ L+ + +   +  +   +D
Sbjct: 295 AKDVFWKMKASDQKPDRVTYITLLDKCGDSGDSRSVSEIWNALKADGYNDNVVSYTAAVD 354

Query: 447 GLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAP 506
            LC+ GR+D A ++F ++ QKG++P   +Y+ +I G  +  +  +A +   +M  +G  P
Sbjct: 355 ALCQVGRVDEALDVFDEMKQKGIIPQQYSYNSLISGFLKADRFNRALELFNHMNIHGPTP 414

Query: 507 NVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEK------ 560
           N  T    ++   ++ ++ K ++    M    + +VPD    + V+  LAK  +      
Sbjct: 415 NGYTHVLFINYHGKSGESLKALKRYELMK--SKGIVPDVVAGNAVLYGLAKTGRLGMAKR 472

Query: 561 -YHECSAVSKS 570
            +HE  A+  S
Sbjct: 473 VFHELKAMGIS 483


>gi|297849764|ref|XP_002892763.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297338605|gb|EFH69022.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 804

 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 162/570 (28%), Positives = 270/570 (47%), Gaps = 35/570 (6%)

Query: 18  KVKLSSLFKSPRQIAAVSSPETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISS 77
           K++ + LF    +   +       N  +   CK G +++  A+ FF  +      P + S
Sbjct: 221 KLEDAVLFLRTSEWKDIGPSVVSFNSIMSSYCKLGFVDM--AKSFFCTVLKCGLVPSVYS 278

Query: 78  FNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEAT 137
            N+L   +         +     +   G+ PD +T NIL+       +G  +   I  A 
Sbjct: 279 HNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILV-------KGFHLLGMISGAG 331

Query: 138 WLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYS 197
            + ++M+  G+ PDVITY  L+ G C+ GN+ + L L K M+S  +E       +I  YS
Sbjct: 332 EVIQDMLDKGLSPDVITYTILLCGQCQLGNIDMGLILLKDMLSRGFE-----LKSIIPYS 386

Query: 198 IIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDL 257
           +++  LCK G VD+A  LF +++  G+ P +V  + +IHG C  G ++    ++ EM   
Sbjct: 387 VMLSGLCKTGRVDEALSLFYDLEAYGLTPDLVAYSIVIHGLCKLGKFDMAVRVYDEMCYK 446

Query: 258 GPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTA 317
              PN  T   ++  LC+ G + EA  LL+ +I  G   D   YN ++DGY   G I+ A
Sbjct: 447 RILPNSRTLGAIMLGLCQKGMLLEARSLLDSLISSGDTLDIILYNIVIDGYAKSGCIEEA 506

Query: 318 REIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSG 377
            E+F      G    V ++N LI GYCK  N+ EA  +   I   G+  +V++Y TL+  
Sbjct: 507 LELFKVAIESGITPNVATFNSLIYGYCKTQNIAEARKILDVIKLYGLVPSVVSYTTLMDA 566

Query: 378 LFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCK-------NNCVQEAV--KLFHM 428
               G     ++L  EMK   + P   TY+++  GLC+       N  ++E +  K  H+
Sbjct: 567 YANCGSIKSIEELRREMKAEGIPPTNVTYSVIFKGLCRGWKLENCNQVLRERILEKFNHV 626

Query: 429 LEMNKFEFGIE----IFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLC 484
           L   + E GI      +N +I  LC+   L  A+ELF K+  + L PT  TY+I+I  LC
Sbjct: 627 LRDMESE-GITPDQITYNTIIQYLCRVKHLSRAFELFKKMKSQNLDPTSATYNILIDSLC 685

Query: 485 RKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPD 544
             G + KA+ FL  ++K   + +   + T++            V L +++ +   N+   
Sbjct: 686 IYGCIRKADRFLYSLQKRNVSLSKFAYTTVIKAHCVKGDPEMAVILFNQLLDRGFNVSIR 745

Query: 545 DTTFSIVVDLLAK-----DEKYHECSAVSK 569
           D  +S V++ L +     + KY  C  +S+
Sbjct: 746 D--YSAVINRLCRRHLAIESKYFFCLMLSR 773



 Score =  191 bits (486), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 120/415 (28%), Positives = 217/415 (52%), Gaps = 9/415 (2%)

Query: 154 TYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAK 213
           TY T+++G CR   L  A+   +     D         ++ S++ I+ S CK G VD AK
Sbjct: 208 TYSTVVDGLCRQQKLEDAVLFLRTSEWKDI------GPSVVSFNSIMSSYCKLGFVDMAK 261

Query: 214 ELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCL 273
             F  +   G+ P+V     LI+G C  G+  E   L  +M   G  P+ +T+N+++   
Sbjct: 262 SFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILVKGF 321

Query: 274 CKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCK-HT 332
              G I+ A  +++ M+ +GL+PD  TY  L+ G C +G ID    +   M S+G +  +
Sbjct: 322 HLLGMISGAGEVIQDMLDKGLSPDVITYTILLCGQCQLGNIDMGLILLKDMLSRGFELKS 381

Query: 333 VVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFD 392
           ++ Y+++++G CK   V+EA+SL+  + + G+   ++ Y+ ++ GL + G+   A +++D
Sbjct: 382 IIPYSVMLSGLCKTGRVDEALSLFYDLEAYGLTPDLVAYSIVIHGLCKLGKFDMAVRVYD 441

Query: 393 EMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAG 452
           EM    + P+  T   ++ GLC+   + EA  L   L  +     I ++N +IDG  K+G
Sbjct: 442 EMCYKRILPNSRTLGAIMLGLCQKGMLLEARSLLDSLISSGDTLDIILYNIVIDGYAKSG 501

Query: 453 RLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFN 512
            ++ A ELF    + G+ P V T++ +I+G C+   + +A   L  ++  G  P+VV++ 
Sbjct: 502 CIEEALELFKVAIESGITPNVATFNSLIYGYCKTQNIAEARKILDVIKLYGLVPSVVSYT 561

Query: 513 TLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAV 567
           TLM  +  N  + K +E L +  + E  + P + T+S++   L +  K   C+ V
Sbjct: 562 TLMDAY-ANCGSIKSIEELRREMKAE-GIPPTNVTYSVIFKGLCRGWKLENCNQV 614



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 128/478 (26%), Positives = 226/478 (47%), Gaps = 56/478 (11%)

Query: 126 GLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYEN 185
           GLC + ++++A    +      + P V+++ ++++ +C+ G + +A    K       + 
Sbjct: 215 GLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSSYCKLGFVDMA----KSFFCTVLKC 270

Query: 186 GLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWE 245
           GL+   +++S++I+I+ LC  G + +A EL  +M   G+ P  V    L+ GF   G   
Sbjct: 271 GLVP--SVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILVKGFHLLGMIS 328

Query: 246 EVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFT-YNSL 304
               +  +MLD G  P+++T+ +++   C+ G I+    LL+ M+ RG        Y+ +
Sbjct: 329 GAGEVIQDMLDKGLSPDVITYTILLCGQCQLGNIDMGLILLKDMLSRGFELKSIIPYSVM 388

Query: 305 MDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGV 364
           + G C  GR+D A  +F  + + G    +V+Y+I+I+G CK+   + A+ +Y ++    +
Sbjct: 389 LSGLCKTGRVDEALSLFYDLEAYGLTPDLVAYSIVIHGLCKLGKFDMAVRVYDEMCYKRI 448

Query: 365 RQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVK 424
                T   ++ GL Q G    A+ L D +       D+  YNI+IDG  K+ C++EA++
Sbjct: 449 LPNSRTLGAIMLGLCQKGMLLEARSLLDSLISSGDTLDIILYNIVIDGYAKSGCIEEALE 508

Query: 425 LFHMLEMNKFEFGIEIFNCLIDGLCKA--------------------------------- 451
           LF +   +     +  FN LI G CK                                  
Sbjct: 509 LFKVAIESGITPNVATFNSLIYGYCKTQNIAEARKILDVIKLYGLVPSVVSYTTLMDAYA 568

Query: 452 --GRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGK------------LEKANDFLL 497
             G + +  EL  ++  +G+ PT VTYS++  GLCR  K            LEK N  L 
Sbjct: 569 NCGSIKSIEELRREMKAEGIPPTNVTYSVIFKGLCRGWKLENCNQVLRERILEKFNHVLR 628

Query: 498 YMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLL 555
            ME  G  P+ +T+NT++    +    S+  EL  KM    +NL P   T++I++D L
Sbjct: 629 DMESEGITPDQITYNTIIQYLCRVKHLSRAFELFKKM--KSQNLDPTSATYNILIDSL 684



 Score =  185 bits (469), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 123/450 (27%), Positives = 223/450 (49%), Gaps = 26/450 (5%)

Query: 72  SPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGL-LPDFLTLNILINCFGNKERGLCVE 130
           SP + ++ +L     +  + D  +   + ++S G  L   +  +++++       GLC  
Sbjct: 343 SPDVITYTILLCGQCQLGNIDMGLILLKDMLSRGFELKSIIPYSVMLS-------GLCKT 395

Query: 131 NRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISK 190
            R+ EA  LF ++ A+G+ PD++ Y  +I+G C+ G   +A+R++ +M    Y+  L   
Sbjct: 396 GRVDEALSLFYDLEAYGLTPDLVAYSIVIHGLCKLGKFDMAVRVYDEMC---YKRIL--- 449

Query: 191 TNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGL 250
            N  +   I+  LC++G++ +A+ L   +   G    +++   +I G+  +G  EE   L
Sbjct: 450 PNSRTLGAIMLGLCQKGMLLEARSLLDSLISSGDTLDIILYNIVIDGYAKSGCIEEALEL 509

Query: 251 FIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCL 310
           F   ++ G  PN+ TFN +I   CK   I EA  +L+++   GL P   +Y +LMD Y  
Sbjct: 510 FKVAIESGITPNVATFNSLIYGYCKTQNIAEARKILDVIKLYGLVPSVVSYTTLMDAYAN 569

Query: 311 VGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQII---------- 360
            G I +  E+   M ++G   T V+Y+++  G C+   +E    + R+ I          
Sbjct: 570 CGSIKSIEELRREMKAEGIPPTNVTYSVIFKGLCRGWKLENCNQVLRERILEKFNHVLRD 629

Query: 361 --SNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNC 418
             S G+    ITYNT++  L +      A +LF +MK  N++P  +TYNILID LC   C
Sbjct: 630 MESEGITPDQITYNTIIQYLCRVKHLSRAFELFKKMKSQNLDPTSATYNILIDSLCIYGC 689

Query: 419 VQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSI 478
           +++A +  + L+          +  +I   C  G  + A  LF++L  +G   ++  YS 
Sbjct: 690 IRKADRFLYSLQKRNVSLSKFAYTTVIKAHCVKGDPEMAVILFNQLLDRGFNVSIRDYSA 749

Query: 479 MIHGLCRKGKLEKANDFLLYMEKNGCAPNV 508
           +I+ LCR+    ++  F   M   G +P++
Sbjct: 750 VINRLCRRHLAIESKYFFCLMLSRGISPDL 779



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 97/404 (24%), Positives = 180/404 (44%), Gaps = 52/404 (12%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CK+G   ++EA   F  +     +P + +++++   + K   +D  +  Y ++    +LP
Sbjct: 393 CKTG--RVDEALSLFYDLEAYGLTPDLVAYSIVIHGLCKLGKFDMAVRVYDEMCYKRILP 450

Query: 109 DFLTLNILINCFGNKERGLCVENR------------------------------IKEATW 138
           +  TL  ++   G  ++G+ +E R                              I+EA  
Sbjct: 451 NSRTLGAIM--LGLCQKGMLLEARSLLDSLISSGDTLDIILYNIVIDGYAKSGCIEEALE 508

Query: 139 LFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSI 198
           LFK  I  G+ P+V T+ +LI G+C+T N++ A    +K++      GL+   ++ SY+ 
Sbjct: 509 LFKVAIESGITPNVATFNSLIYGYCKTQNIAEA----RKILDVIKLYGLVP--SVVSYTT 562

Query: 199 IIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIE----- 253
           ++D+    G +   +EL  EMK  GI P  V  + +  G C     E  N +  E     
Sbjct: 563 LMDAYANCGSIKSIEELRREMKAEGIPPTNVTYSVIFKGLCRGWKLENCNQVLRERILEK 622

Query: 254 -------MLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMD 306
                  M   G  P+ +T+N +I  LC+   ++ A  L + M  + L+P   TYN L+D
Sbjct: 623 FNHVLRDMESEGITPDQITYNTIIQYLCRVKHLSRAFELFKKMKSQNLDPTSATYNILID 682

Query: 307 GYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQ 366
             C+ G I  A     S+  +    +  +Y  +I  +C   + E A+ L+ Q++  G   
Sbjct: 683 SLCIYGCIRKADRFLYSLQKRNVSLSKFAYTTVIKAHCVKGDPEMAVILFNQLLDRGFNV 742

Query: 367 TVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILI 410
           ++  Y+ +++ L +   A  ++  F  M    + PDL    ++I
Sbjct: 743 SIRDYSAVINRLCRRHLAIESKYFFCLMLSRGISPDLDICEVMI 786


>gi|357167655|ref|XP_003581269.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 587

 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 145/481 (30%), Positives = 238/481 (49%), Gaps = 31/481 (6%)

Query: 83  GAVAKNRHYDAVISFY---------RKLVS-IGLLPDFLTLNILINCFGNKERGLCVENR 132
           G+ A    Y A+   Y         R++V  + +LP     N L++        LCV  +
Sbjct: 115 GSAATAVTYSALADGYCRVGRLDEARRVVDGMPVLPSAYAYNPLMH-------ALCVRGQ 167

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKM-VSGDYENGLISKT 191
           +++A  L  NM+  G  PDV+TY  L+   C+      A+ L   M V G       + T
Sbjct: 168 VRDALVLLDNMLYRGCAPDVVTYNILLEAACKGRGYRQAMELIDLMRVEG------CTPT 221

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
           N+ +Y++I+D +C+EG VD A+EL   +   G  P  V   T++ G   AG WE+V  L 
Sbjct: 222 NV-TYNVIMDGMCREGDVDYARELLNSLPSYGCTPNTVNYNTVLKGLRTAGRWEDVEELI 280

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
            EM      P+  T +V+I  LC+ G    A  LLE M +     +  TYN+++ G C  
Sbjct: 281 AEMFSENCPPSEATLSVVISSLCQEGLFQRAIRLLEKMSKHDCTANIVTYNAVVSGLCEQ 340

Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
           G +D A  +  +M + GCK  + +YNIL+ G C     E+A  L  ++        ++T+
Sbjct: 341 GHVDGALYLLSNMQTDGCKPNIFTYNILVKGLCNAERWEDAEDLMAKMSQTDCLPDILTF 400

Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
           NT++  L Q G    A ++F +M      P+  TY+ +I+GL K   ++++++L +  EM
Sbjct: 401 NTIIGFLCQKGLTMQAVEVFKQMPEKGCCPNSVTYSSVIEGLAKTGKMEQSLELLN--EM 458

Query: 432 NKFEFGIEI-FNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLE 490
               F  EI ++ L + L +  +L  A ++ HKL   G+ P  V Y+ ++ GLCR GK +
Sbjct: 459 GSKGFNPEINYHLLAECLNEEDKLVEAIQMVHKLQDTGISPQAVLYNTILLGLCRNGKTD 518

Query: 491 KANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPE---RNLVPDDTT 547
           +A D L  M  +GC P+  T++ L+ G        +  ELL  ++  +    NL+ +D +
Sbjct: 519 QAIDILSNMVSDGCMPDESTYSILIQGLAHEGYMKEARELLSTLSSRDVIVDNLIKNDAS 578

Query: 548 F 548
            
Sbjct: 579 L 579



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 118/414 (28%), Positives = 190/414 (45%), Gaps = 49/414 (11%)

Query: 150 PDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLV 209
           PDV     L+   CR G  + A R+ +   S              +YS + D  C+ G +
Sbjct: 86  PDVALANRLVRDLCRRGRPADAARVVEACGSA---------ATAVTYSALADGYCRVGRL 136

Query: 210 DKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVM 269
           D+A+ +   + G  + P+      L+H  C  G   +   L   ML  G  P+++T+N++
Sbjct: 137 DEARRV---VDGMPVLPSAYAYNPLMHALCVRGQVRDALVLLDNMLYRGCAPDVVTYNIL 193

Query: 270 IDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGC 329
           ++  CKG    +A  L++LM   G  P   TYN +MDG C  G +D ARE+  S+ S GC
Sbjct: 194 LEAACKGRGYRQAMELIDLMRVEGCTPTNVTYNVIMDGMCREGDVDYARELLNSLPSYGC 253

Query: 330 KHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQK 389
               V+Y                                   NT+L GL  AG+    ++
Sbjct: 254 TPNTVNY-----------------------------------NTVLKGLRTAGRWEDVEE 278

Query: 390 LFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLC 449
           L  EM   N  P  +T +++I  LC+    Q A++L   +  +     I  +N ++ GLC
Sbjct: 279 LIAEMFSENCPPSEATLSVVISSLCQEGLFQRAIRLLEKMSKHDCTANIVTYNAVVSGLC 338

Query: 450 KAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVV 509
           + G +D A  L   +   G  P + TY+I++ GLC   + E A D +  M +  C P+++
Sbjct: 339 EQGHVDGALYLLSNMQTDGCKPNIFTYNILVKGLCNAERWEDAEDLMAKMSQTDCLPDIL 398

Query: 510 TFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
           TFNT++    Q   T + VE+  +M  PE+   P+  T+S V++ LAK  K  +
Sbjct: 399 TFNTIIGFLCQKGLTMQAVEVFKQM--PEKGCCPNSVTYSSVIEGLAKTGKMEQ 450



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 107/423 (25%), Positives = 187/423 (44%), Gaps = 51/423 (12%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
           N  +H  C  G   + +A      M +   +P + ++N+L  A  K R Y   +     +
Sbjct: 156 NPLMHALCVRG--QVRDALVLLDNMLYRGCAPDVVTYNILLEAACKGRGYRQAMELIDLM 213

Query: 102 VSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLING 161
              G  P  +T N++++       G+C E  +  A  L  ++ ++G  P+ + Y T++ G
Sbjct: 214 RVEGCTPTNVTYNVIMD-------GMCREGDVDYARELLNSLPSYGCTPNTVNYNTVLKG 266

Query: 162 -----------------------------------FCRTGNLSVALRLHKKMVSGDYENG 186
                                               C+ G    A+RL +KM   D    
Sbjct: 267 LRTAGRWEDVEELIAEMFSENCPPSEATLSVVISSLCQEGLFQRAIRLLEKMSKHD---- 322

Query: 187 LISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEE 246
                NI +Y+ ++  LC++G VD A  L   M+  G  P +     L+ G C A  WE+
Sbjct: 323 --CTANIVTYNAVVSGLCEQGHVDGALYLLSNMQTDGCKPNIFTYNILVKGLCNAERWED 380

Query: 247 VNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMD 306
              L  +M      P++LTFN +I  LC+ G   +A  + + M ++G  P+  TY+S+++
Sbjct: 381 AEDLMAKMSQTDCLPDILTFNTIIGFLCQKGLTMQAVEVFKQMPEKGCCPNSVTYSSVIE 440

Query: 307 GYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQ 366
           G    G+++ + E+   M SKG  +  ++Y++L     +   + EA+ +  ++   G+  
Sbjct: 441 GLAKTGKMEQSLELLNEMGSKG-FNPEINYHLLAECLNEEDKLVEAIQMVHKLQDTGISP 499

Query: 367 TVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLF 426
             + YNT+L GL + G+   A  +   M      PD STY+ILI GL     ++EA +L 
Sbjct: 500 QAVLYNTILLGLCRNGKTDQAIDILSNMVSDGCMPDESTYSILIQGLAHEGYMKEARELL 559

Query: 427 HML 429
             L
Sbjct: 560 STL 562



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 79/300 (26%), Positives = 140/300 (46%), Gaps = 18/300 (6%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
           P  ++ +++  ++ +   +   I    K+       + +T N +++       GLC +  
Sbjct: 290 PSEATLSVVISSLCQEGLFQRAIRLLEKMSKHDCTANIVTYNAVVS-------GLCEQGH 342

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
           +  A +L  NM   G +P++ TY  L+ G C       A  L  KM   D         +
Sbjct: 343 VDGALYLLSNMQTDGCKPNIFTYNILVKGLCNAERWEDAEDLMAKMSQTD------CLPD 396

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
           I +++ II  LC++GL  +A E+F +M  +G  P  V  +++I G    G  E+   L  
Sbjct: 397 ILTFNTIIGFLCQKGLTMQAVEVFKQMPEKGCCPNSVTYSSVIEGLAKTGKMEQSLELLN 456

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
           EM   G  P  + ++++ +CL +  K+ EA  ++  +   G++P    YN+++ G C  G
Sbjct: 457 EMGSKGFNPE-INYHLLAECLNEEDKLVEAIQMVHKLQDTGISPQAVLYNTILLGLCRNG 515

Query: 313 RIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYN 372
           + D A +I  +M S GC     +Y+ILI G    L  E  M   R+++S    + VI  N
Sbjct: 516 KTDQAIDILSNMVSDGCMPDESTYSILIQG----LAHEGYMKEARELLSTLSSRDVIVDN 571


>gi|299471045|emb|CBN78905.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 755

 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 141/487 (28%), Positives = 228/487 (46%), Gaps = 15/487 (3%)

Query: 66  MTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKER 125
           M   +  P   S+N    A  +   ++ VI   R++ S+GL PD +T N +I   G    
Sbjct: 206 MADREVVPDEISYNSAIKACGRGGQWERVIGLLREMPSVGLTPDAITYNSVITGCGK--- 262

Query: 126 GLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYEN 185
               E + KEA  +   M A G+ P+ I+Y   I    R+G    A+ + ++M S     
Sbjct: 263 ----EGQWKEALSVLTEMSAKGLTPETISYNMAIRACGRSGRWKEAVEVLRQMES----Q 314

Query: 186 GLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWE 245
           G+    ++ SY   I +    G  + + +L  EM GRG+ P  +   + I      G WE
Sbjct: 315 GVTP--DVISYDAAIKACGGGGQWETSVDLLDEMAGRGVAPNTIHFNSAIVACGKGGQWE 372

Query: 246 EVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLM 305
           +   L  E+  LG  P+  +FN  I    K G+  EA  LL+ M  + L PD  +YNS +
Sbjct: 373 KAVELLREVTALGLTPDATSFNSAIAACTKSGRWKEALELLKEMPAKRLKPDAISYNSAI 432

Query: 306 DGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVR 365
           +     G+ + A E+   M +KG    V+S NI I    +    +E + L RQ+ + G+ 
Sbjct: 433 EACGKGGQWEMALELRRQMPTKGLTPNVISSNIAIRACGERGRWQEGLELLRQMPAQGLT 492

Query: 366 QTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKL 425
             VITYN+ +    + GQ   A  L  +MK   + PD  TYN  I    K    +EAV L
Sbjct: 493 PNVITYNSAIKTCGKGGQWEKALDLLAKMKELAMTPDSITYNSAIAACSKRGRWKEAVAL 552

Query: 426 FHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCR 485
              +        +  +   ID   K G+ + A EL  ++P KGL P V+TY+ +I    R
Sbjct: 553 LREMPGQGLTPDVISYTAAIDAYGKNGQWERAVELLRQMPTKGLTPNVITYNSVIKACGR 612

Query: 486 KGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDD 545
            G+ EKA D L  +++   AP+++++N  +    +  +  + ++LL +M  P   L PD 
Sbjct: 613 GGEWEKALDLLKELKETAVAPDLMSYNLAISACGKRGRWEEALDLLREM--PAEGLTPDV 670

Query: 546 TTFSIVV 552
            +++  +
Sbjct: 671 ISYTSAI 677



 Score =  179 bits (453), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 136/535 (25%), Positives = 224/535 (41%), Gaps = 73/535 (13%)

Query: 55  NLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLN 114
              EA      M+    +P   S+N+   A  ++  +   +   R++ S G+ PD ++ +
Sbjct: 265 QWKEALSVLTEMSAKGLTPETISYNMAIRACGRSGRWKEAVEVLRQMESQGVTPDVISYD 324

Query: 115 ILIN-CFGNKE-------------RGLCVENRI----------KEATW-----LFKNMIA 145
             I  C G  +             RG+   N I          K   W     L + + A
Sbjct: 325 AAIKACGGGGQWETSVDLLDEMAGRGV-APNTIHFNSAIVACGKGGQWEKAVELLREVTA 383

Query: 146 FGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCK 205
            G+ PD  ++ + I    ++G    AL L K+M +         K +  SY+  I++  K
Sbjct: 384 LGLTPDATSFNSAIAACTKSGRWKEALELLKEMPAKRL------KPDAISYNSAIEACGK 437

Query: 206 EGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLT 265
            G  + A EL  +M  +G+ P V+     I      G W+E   L  +M   G  PN++T
Sbjct: 438 GGQWEMALELRRQMPTKGLTPNVISSNIAIRACGERGRWQEGLELLRQMPAQGLTPNVIT 497

Query: 266 FNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMH 325
           +N  I    KGG+  +A  LL  M +  + PD  TYNS +      GR   A  +   M 
Sbjct: 498 YNSAIKTCGKGGQWEKALDLLAKMKELAMTPDSITYNSAIAACSKRGRWKEAVALLREMP 557

Query: 326 SKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAG 385
            +G    V+SY   I+ Y K    E A+ L RQ+ + G+   VITYN+++    + G+  
Sbjct: 558 GQGLTPDVISYTAAIDAYGKNGQWERAVELLRQMPTKGLTPNVITYNSVIKACGRGGEWE 617

Query: 386 YAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLI 445
            A  L  E+K   V PDL +YN+ I    K                              
Sbjct: 618 KALDLLKELKETAVAPDLMSYNLAISACGKR----------------------------- 648

Query: 446 DGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCA 505
                 GR + A +L  ++P +GL P V++Y+  I     +G+ EKA   L  M  +G +
Sbjct: 649 ------GRWEEALDLLREMPAEGLTPDVISYTSAIRACNAEGEWEKALGLLNLMGAHGVS 702

Query: 506 PNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEK 560
           P   +++  +    +  +  + V L+ +MA  +R L   + + S++V+ L  D K
Sbjct: 703 PTATSYSLAIEACGKGGRREEAVCLVREMA--QRGLSHRNISNSLIVEALGDDAK 755



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 110/414 (26%), Positives = 190/414 (45%), Gaps = 7/414 (1%)

Query: 154 TYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAK 213
           +Y T I    R G    AL L +++     + G+    N+F Y+  I++       + A 
Sbjct: 146 SYTTAITTCGRQGQWEKALELLREIPE---QEGV--SPNVFCYNSAIEACGSGDQWEIAV 200

Query: 214 ELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCL 273
            L  EM  R + P  +   + I      G WE V GL  EM  +G  P+ +T+N +I   
Sbjct: 201 SLLREMADREVVPDEISYNSAIKACGRGGQWERVIGLLREMPSVGLTPDAITYNSVITGC 260

Query: 274 CKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTV 333
            K G+  EA  +L  M  +GL P+  +YN  +      GR   A E+   M S+G    V
Sbjct: 261 GKEGQWKEALSVLTEMSAKGLTPETISYNMAIRACGRSGRWKEAVEVLRQMESQGVTPDV 320

Query: 334 VSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDE 393
           +SY+  I         E ++ L  ++   GV    I +N+ +    + GQ   A +L  E
Sbjct: 321 ISYDAAIKACGGGGQWETSVDLLDEMAGRGVAPNTIHFNSAIVACGKGGQWEKAVELLRE 380

Query: 394 MKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGR 453
           +    + PD +++N  I    K+   +EA++L   +   + +     +N  I+   K G+
Sbjct: 381 VTALGLTPDATSFNSAIAACTKSGRWKEALELLKEMPAKRLKPDAISYNSAIEACGKGGQ 440

Query: 454 LDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNT 513
            + A EL  ++P KGL P V++ +I I     +G+ ++  + L  M   G  PNV+T+N+
Sbjct: 441 WEMALELRRQMPTKGLTPNVISSNIAIRACGERGRWQEGLELLRQMPAQGLTPNVITYNS 500

Query: 514 LMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAV 567
            +    +  +  K ++LL KM   E  + PD  T++  +   +K  ++ E  A+
Sbjct: 501 AIKTCGKGGQWEKALDLLAKMK--ELAMTPDSITYNSAIAACSKRGRWKEAVAL 552


>gi|357121285|ref|XP_003562351.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 624

 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 137/512 (26%), Positives = 239/512 (46%), Gaps = 15/512 (2%)

Query: 29  RQIAAVSSPETQLNEFLHENCKSGIINLNEARYFFGYMTHMQ--PSPPISSFNLLFGAVA 86
           R  AAV  P      F       G   + +A      MT     P PP+  ++++  +  
Sbjct: 105 RLAAAVPVPPNAYTYFPVVRGLCGRGRIADALAVLDEMTSRSCVPIPPM--YHVIIESAC 162

Query: 87  KNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAF 146
           ++  Y + +     L + G   D    N++IN        +C +  + E   + + +  F
Sbjct: 163 RSGGYSSALRVLEALHAKGSTLDTGNCNLVIN-------AICDQGCVDEGLEMLRKLPLF 215

Query: 147 GVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISK----TNIFSYSIIIDS 202
           G   D+++Y  ++ G C          L  +MV        +++     +I  Y+ IID 
Sbjct: 216 GCEADIVSYNAVLKGLCAAKRWGDVEELMDEMVKVHEALSQMAQHGCTPDIRMYATIIDG 275

Query: 203 LCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPN 262
           +CKEG  + A E+   M   G+ P VV   T++ G C A  WE+   L  EM       +
Sbjct: 276 ICKEGHHEVANEILSRMPSYGLKPNVVCYNTVLKGICSADRWEKAEELLTEMYQKNCPLD 335

Query: 263 LLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFL 322
            +TFN+++D  C+ G ++    LLE M++ G  PD  TY ++++G+C  G ID A  +  
Sbjct: 336 DVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLK 395

Query: 323 SMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAG 382
           +M S GCK   +SY I++ G C      +A  L  ++I  G     +T+NT+++ L + G
Sbjct: 396 NMPSCGCKPNTISYTIVLKGLCSTERWVDAEELMSRMIQQGCLPNPVTFNTIINFLCKKG 455

Query: 383 QAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFN 442
               A +L  +M +    PDL +Y+ +IDGL K    +EA++L +++        +  ++
Sbjct: 456 LVEQAIELLKQMLVNGCNPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNVITYS 515

Query: 443 CLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKN 502
            +   L + GR+D   ++F  +    +    V Y+ +I  LC++ + + A DFL YM  N
Sbjct: 516 SMAFALAREGRIDKVIQMFDNIQDATIRSDAVLYNAVISSLCKRRETDLAIDFLAYMVSN 575

Query: 503 GCAPNVVTFNTLMHGFLQNNKTSKVVELLHKM 534
           GC PN  T+  L+ G        +  +LL ++
Sbjct: 576 GCMPNESTYTALIKGLASEGLLCEAQDLLSEL 607



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 124/447 (27%), Positives = 212/447 (47%), Gaps = 26/447 (5%)

Query: 125 RGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALR----LHKKMVS 180
           RGLC   RI +A  +   M +    P    Y  +I   CR+G  S ALR    LH K  +
Sbjct: 124 RGLCGRGRIADALAVLDEMTSRSCVPIPPMYHVIIESACRSGGYSSALRVLEALHAKGST 183

Query: 181 GDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCC 240
            D  N           +++I+++C +G VD+  E+  ++   G    +V    ++ G C 
Sbjct: 184 LDTGN----------CNLVINAICDQGCVDEGLEMLRKLPLFGCEADIVSYNAVLKGLCA 233

Query: 241 AGNWEEVNGLFIEMLDL----------GPRPNLLTFNVMIDCLCKGGKINEANGLLELMI 290
           A  W +V  L  EM+ +          G  P++  +  +ID +CK G    AN +L  M 
Sbjct: 234 AKRWGDVEELMDEMVKVHEALSQMAQHGCTPDIRMYATIIDGICKEGHHEVANEILSRMP 293

Query: 291 QRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVE 350
             GL P+   YN+++ G C   R + A E+   M+ K C    V++NIL++ +C+   V+
Sbjct: 294 SYGLKPNVVCYNTVLKGICSADRWEKAEELLTEMYQKNCPLDDVTFNILVDFFCQNGLVD 353

Query: 351 EAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILI 410
             + L  Q++ +G    VITY T+++G  + G    A  L   M     +P+  +Y I++
Sbjct: 354 RVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKNMPSCGCKPNTISYTIVL 413

Query: 411 DGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLV 470
            GLC      +A +L   +           FN +I+ LCK G ++ A EL  ++   G  
Sbjct: 414 KGLCSTERWVDAEELMSRMIQQGCLPNPVTFNTIINFLCKKGLVEQAIELLKQMLVNGCN 473

Query: 471 PTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVEL 530
           P +++YS +I GL + GK E+A + L  M   G  PNV+T++++     +  +  KV+++
Sbjct: 474 PDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNVITYSSMAFALAREGRIDKVIQM 533

Query: 531 LHKMAEPERNLVPDDTTFSIVVDLLAK 557
              +   +  +  D   ++ V+  L K
Sbjct: 534 FDNIQ--DATIRSDAVLYNAVISSLCK 558



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 120/449 (26%), Positives = 202/449 (44%), Gaps = 24/449 (5%)

Query: 125 RGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYE 184
           R LCV  R  +A    + + A G    V+ Y  ++ G+CR G +  A RL          
Sbjct: 60  RSLCVAGRTADA---VRALDAAGNAAGVVDYNAMVAGYCRVGQVEAARRLAA-------- 108

Query: 185 NGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNW 244
             +    N ++Y  ++  LC  G +  A  +  EM  R   P   +   +I   C +G +
Sbjct: 109 -AVPVPPNAYTYFPVVRGLCGRGRIADALAVLDEMTSRSCVPIPPMYHVIIESACRSGGY 167

Query: 245 EEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSL 304
                +   +   G   +    N++I+ +C  G ++E   +L  +   G   D  +YN++
Sbjct: 168 SSALRVLEALHAKGSTLDTGNCNLVINAICDQGCVDEGLEMLRKLPLFGCEADIVSYNAV 227

Query: 305 MDGYCLVGRIDTAREI----------FLSMHSKGCKHTVVSYNILINGYCKILNVEEAMS 354
           + G C   R     E+             M   GC   +  Y  +I+G CK  + E A  
Sbjct: 228 LKGLCAAKRWGDVEELMDEMVKVHEALSQMAQHGCTPDIRMYATIIDGICKEGHHEVANE 287

Query: 355 LYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLC 414
           +  ++ S G++  V+ YNT+L G+  A +   A++L  EM   N   D  T+NIL+D  C
Sbjct: 288 ILSRMPSYGLKPNVVCYNTVLKGICSADRWEKAEELLTEMYQKNCPLDDVTFNILVDFFC 347

Query: 415 KNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVV 474
           +N  V   ++L   +  +     +  +  +I+G CK G +D A  L   +P  G  P  +
Sbjct: 348 QNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKNMPSCGCKPNTI 407

Query: 475 TYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKM 534
           +Y+I++ GLC   +   A + +  M + GC PN VTFNT+++   +     + +ELL +M
Sbjct: 408 SYTIVLKGLCSTERWVDAEELMSRMIQQGCLPNPVTFNTIINFLCKKGLVEQAIELLKQM 467

Query: 535 AEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
                N  PD  ++S V+D L K  K  E
Sbjct: 468 LVNGCN--PDLISYSTVIDGLGKAGKTEE 494



 Score =  125 bits (315), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 85/285 (29%), Positives = 138/285 (48%), Gaps = 13/285 (4%)

Query: 77  SFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEA 136
           +FN+L     +N   D VI    +++  G +PD +T   +IN       G C E  I EA
Sbjct: 338 TFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVIN-------GFCKEGLIDEA 390

Query: 137 TWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSY 196
             L KNM + G +P+ I+Y  ++ G C T     A  L  +M+    + G +   N  ++
Sbjct: 391 VMLLKNMPSCGCKPNTISYTIVLKGLCSTERWVDAEELMSRMI----QQGCLP--NPVTF 444

Query: 197 SIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLD 256
           + II+ LCK+GLV++A EL  +M   G NP ++  +T+I G   AG  EE   L   M++
Sbjct: 445 NTIINFLCKKGLVEQAIELLKQMLVNGCNPDLISYSTVIDGLGKAGKTEEALELLNVMIN 504

Query: 257 LGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDT 316
            G  PN++T++ M   L + G+I++   + + +    +  D   YN+++   C     D 
Sbjct: 505 KGITPNVITYSSMAFALAREGRIDKVIQMFDNIQDATIRSDAVLYNAVISSLCKRRETDL 564

Query: 317 AREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIIS 361
           A +    M S GC     +Y  LI G      + EA  L  ++ S
Sbjct: 565 AIDFLAYMVSNGCMPNESTYTALIKGLASEGLLCEAQDLLSELCS 609



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 62/244 (25%), Positives = 106/244 (43%), Gaps = 15/244 (6%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CK G+I+  EA      M      P   S+ ++   +     +        +++  G LP
Sbjct: 382 CKEGLID--EAVMLLKNMPSCGCKPNTISYTIVLKGLCSTERWVDAEELMSRMIQQGCLP 439

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           + +T N +IN        LC +  +++A  L K M+  G  PD+I+Y T+I+G  + G  
Sbjct: 440 NPVTFNTIIN-------FLCKKGLVEQAIELLKQMLVNGCNPDLISYSTVIDGLGKAGKT 492

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
             AL L   M++     G+    N+ +YS +  +L +EG +DK  ++F  ++   I    
Sbjct: 493 EEALELLNVMIN----KGITP--NVITYSSMAFALAREGRIDKVIQMFDNIQDATIRSDA 546

Query: 229 VVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLEL 288
           V+   +I   C     +        M+  G  PN  T+  +I  L   G + EA  LL  
Sbjct: 547 VLYNAVISSLCKRRETDLAIDFLAYMVSNGCMPNESTYTALIKGLASEGLLCEAQDLLSE 606

Query: 289 MIQR 292
           +  R
Sbjct: 607 LCSR 610


>gi|297832318|ref|XP_002884041.1| binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297329881|gb|EFH60300.1| binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 874

 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 168/619 (27%), Positives = 278/619 (44%), Gaps = 96/619 (15%)

Query: 10  LFSSETVSKVKLSSLFKSPRQIAAVSSPETQLNEFLHENCKSGIINLNEARYFFGYMTHM 69
           L  S ++ K KLSSL       A                 KS  I+    ++ F      
Sbjct: 64  LILSSSIQKTKLSSLLSVVSIFA-----------------KSNHIDKAFPQFQFVRSRFP 106

Query: 70  QPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCV 129
           +  P I  +N+L  +  + R  + V   Y+ +V  G+ P+  T N+LI       R LC 
Sbjct: 107 ENKPGIYLYNVLLESCIRERRVEFVSWLYKDMVLCGISPETYTFNLLI-------RALCD 159

Query: 130 ENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVS-GDYENGLI 188
            + +  A  LF  M   G +P+  T+G L+ G+C+ G     L L   M S G   N ++
Sbjct: 160 SSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNSMESFGVLPNKVV 219

Query: 189 SKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVN 248
                  Y+ I+ S C+EG  D +++L  +M+  G+ P +V   + I   C  G   + +
Sbjct: 220 -------YNTIVSSFCREGRNDDSEKLVEKMREEGLVPDIVTFNSRISALCKEGKVLDAS 272

Query: 249 GLFIEM-LD--LG-PRPNLLTFNVMIDCLCK----------------------------- 275
            +F +M LD  LG PRPN +T+N+M+   CK                             
Sbjct: 273 RIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLVSLQSYNIW 332

Query: 276 ------GGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGC 329
                  GK  EA  +L+ MI +G+ P  ++YN LMDG C +G +  A+ I   M   G 
Sbjct: 333 LQGLVRHGKFIEAETVLKQMIDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGV 392

Query: 330 KHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQK 389
               V+Y  L++GYC +  V+ A SL ++++ N       T N LL  L+  G+   A++
Sbjct: 393 SPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWNMGRISEAEE 452

Query: 390 LFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM------------------ 431
           L  +M       D  T NI++DGLC +  + +A+++   + +                  
Sbjct: 453 LLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVD 512

Query: 432 -----NKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRK 486
                N     +  ++ L++GLCKAGR   A  LF ++  + L P  + Y+I IH  C++
Sbjct: 513 DSLIENNCLPDLITYSTLLNGLCKAGRFAEAKTLFAEMMGEKLQPDSLAYNIFIHHFCKQ 572

Query: 487 GKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDT 546
           GK+  A   L  MEK GC  ++ T+N+L+ G    N+  ++  L+ +M   E+ + P+  
Sbjct: 573 GKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMR--EKGISPNIC 630

Query: 547 TFSIVVDLLAKDEKYHECS 565
           T++  +  L +  K  + +
Sbjct: 631 TYNTAIQYLCEGGKVEDAT 649



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 142/542 (26%), Positives = 245/542 (45%), Gaps = 70/542 (12%)

Query: 36  SPET-QLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAV 94
           SPET   N  +   C S  ++   AR  F  M      P   +F +L     K    D  
Sbjct: 144 SPETYTFNLLIRALCDSSCVD--AARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKG 201

Query: 95  ISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVIT 154
           +     + S G+LP+ +  N +++ F       C E R  ++  L + M   G+ PD++T
Sbjct: 202 LELLNSMESFGVLPNKVVYNTIVSSF-------CREGRNDDSEKLVEKMREEGLVPDIVT 254

Query: 155 YGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKE 214
           + + I+  C+ G +  A R+   M   +Y    + + N  +Y++++   CK GL++ AK 
Sbjct: 255 FNSRISALCKEGKVLDASRIFSDMELDEYLG--LPRPNSITYNLMLKGFCKVGLLEDAKT 312

Query: 215 LFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLC 274
           LF  ++      ++      + G    G + E   +  +M+D G  P++ ++N+++D LC
Sbjct: 313 LFESIRENDDLVSLQSYNIWLQGLVRHGKFIEAETVLKQMIDKGIGPSIYSYNILMDGLC 372

Query: 275 KGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAR---------------- 318
           K G +++A  ++ LM + G++PD  TY  L+ GYC VG++D A+                
Sbjct: 373 KLGMLSDAKTIVGLMKRNGVSPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAY 432

Query: 319 -------------------EIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYR-- 357
                              E+   M+ KG     V+ NI+++G C    +++A+ + +  
Sbjct: 433 TCNILLHSLWNMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGM 492

Query: 358 ---------------------QIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKL 396
                                 +I N     +ITY+TLL+GL +AG+   A+ LF EM  
Sbjct: 493 RVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKTLFAEMMG 552

Query: 397 YNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDN 456
             ++PD   YNI I   CK   +  A ++   +E       +E +N LI GL    ++  
Sbjct: 553 EKLQPDSLAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFE 612

Query: 457 AWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMH 516
              L  ++ +KG+ P + TY+  I  LC  GK+E A + L  M +   APNV +F  L+ 
Sbjct: 613 IHGLMDEMREKGISPNICTYNTAIQYLCEGGKVEDATNLLDEMMQKNIAPNVFSFKYLIG 672

Query: 517 GF 518
            F
Sbjct: 673 AF 674



 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 116/444 (26%), Positives = 214/444 (48%), Gaps = 31/444 (6%)

Query: 149 RPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGL 208
           +P +  Y  L+    R   +     L+K MV      G+  +T  ++++++I +LC    
Sbjct: 109 KPGIYLYNVLLESCIRERRVEFVSWLYKDMVLC----GISPET--YTFNLLIRALCDSSC 162

Query: 209 VDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNV 268
           VD A+ELF EM  +G  P       L+ G+C AG  ++   L   M   G  PN + +N 
Sbjct: 163 VDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNSMESFGVLPNKVVYNT 222

Query: 269 MIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKG 328
           ++   C+ G+ +++  L+E M + GL PD  T+NS +   C  G++  A  IF  M    
Sbjct: 223 IVSSFCREGRNDDSEKLVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDE 282

Query: 329 C----KHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQA 384
                +   ++YN+++ G+CK+  +E+A +L+  I  N    ++ +YN  L GL + G+ 
Sbjct: 283 YLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLVSLQSYNIWLQGLVRHGKF 342

Query: 385 GYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCL 444
             A+ +  +M    + P + +YNIL+DGLCK   + +A  +  +++ N        + CL
Sbjct: 343 IEAETVLKQMIDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVSPDAVTYGCL 402

Query: 445 IDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGC 504
           + G C  G++D A  L  ++ +   +P   T +I++H L   G++ +A + L  M + G 
Sbjct: 403 LHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWNMGRISEAEELLRKMNEKGY 462

Query: 505 APNVVTFNTLMHGFLQNNKTSKVVELLHKM---------------------AEPERNLVP 543
             + VT N ++ G   + +  K +E++  M                     +  E N +P
Sbjct: 463 GLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLP 522

Query: 544 DDTTFSIVVDLLAKDEKYHECSAV 567
           D  T+S +++ L K  ++ E   +
Sbjct: 523 DLITYSTLLNGLCKAGRFAEAKTL 546



 Score =  169 bits (427), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 137/560 (24%), Positives = 242/560 (43%), Gaps = 61/560 (10%)

Query: 8   RCLFSSETVSKVKLSSLFKSPRQIAAVSSPET-QLNEFLHENCKSGIINLNEARYFFGYM 66
           + L +S   S ++L      PR       P +   N  L   CK G+  L +A+  F  +
Sbjct: 267 KVLDASRIFSDMELDEYLGLPR-------PNSITYNLMLKGFCKVGL--LEDAKTLFESI 317

Query: 67  THMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERG 126
                   + S+N+    + ++  +    +  ++++  G+ P   + NIL++       G
Sbjct: 318 RENDDLVSLQSYNIWLQGLVRHGKFIEAETVLKQMIDKGIGPSIYSYNILMD-------G 370

Query: 127 LCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENG 186
           LC    + +A  +   M   GV PD +TYG L++G+C  G +  A  L ++M+  +    
Sbjct: 371 LCKLGMLSDAKTIVGLMKRNGVSPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNN---- 426

Query: 187 LISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEE 246
                N ++ +I++ SL   G + +A+EL  +M  +G     V C  ++ G C +G  ++
Sbjct: 427 --CLPNAYTCNILLHSLWNMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDK 484

Query: 247 ----VNGLFIE----MLDLGPR---------------PNLLTFNVMIDCLCKGGKINEAN 283
               V G+ +     + +LG                 P+L+T++ +++ LCK G+  EA 
Sbjct: 485 AIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAK 544

Query: 284 GLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGY 343
            L   M+   L PD   YN  +  +C  G+I +A  +   M  KGC  ++ +YN LI G 
Sbjct: 545 TLFAEMMGEKLQPDSLAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGL 604

Query: 344 CKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDL 403
                + E   L  ++   G+   + TYNT +  L + G+   A  L DEM   N+ P++
Sbjct: 605 GIKNQIFEIHGLMDEMREKGISPNICTYNTAIQYLCEGGKVEDATNLLDEMMQKNIAPNV 664

Query: 404 STYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEI-------FNCLIDGLCKAGRLDN 456
            ++  LI   CK       V  F M +   FE  + I       ++ + + L  AG+L  
Sbjct: 665 FSFKYLIGAFCK-------VPDFDMAQ-EVFETAVSICGQKEGLYSLMFNELLAAGQLLK 716

Query: 457 AWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMH 516
           A EL   +  +G       Y  ++  LC+K +LE A+  L  M   G   +      ++ 
Sbjct: 717 ATELLEAVLDRGFELGTFLYKDLVVSLCKKDELEVASGILHKMIDKGYGFDPAALMPVID 776

Query: 517 GFLQNNKTSKVVELLHKMAE 536
           G  +     +      KM E
Sbjct: 777 GLGKMGNKKEANNFAEKMME 796



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 116/444 (26%), Positives = 196/444 (44%), Gaps = 29/444 (6%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CK G+  L++A+   G M     SP   ++  L          DA  S  ++++    LP
Sbjct: 372 CKLGM--LSDAKTIVGLMKRNGVSPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLP 429

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           +  T NIL++   N         RI EA  L + M   G   D +T   +++G C +G L
Sbjct: 430 NAYTCNILLHSLWNM-------GRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGEL 482

Query: 169 SVA------LRLHKKMVSGDYEN---GLISKT--------NIFSYSIIIDSLCKEGLVDK 211
             A      +R+H     G+  N   GL+  +        ++ +YS +++ LCK G   +
Sbjct: 483 DKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAE 542

Query: 212 AKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMID 271
           AK LF EM G  + P  +     IH FC  G       +  +M   G   +L T+N +I 
Sbjct: 543 AKTLFAEMMGEKLQPDSLAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLIL 602

Query: 272 CLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKH 331
            L    +I E +GL++ M ++G++P+  TYN+ +   C  G+++ A  +   M  K    
Sbjct: 603 GLGIKNQIFEIHGLMDEMREKGISPNICTYNTAIQYLCEGGKVEDATNLLDEMMQKNIAP 662

Query: 332 TVVSYNILINGYCKILNVEEAMSLYRQIIS-NGVRQTVITYNTLLSGLFQAGQAGYAQKL 390
            V S+  LI  +CK+ + + A  ++   +S  G ++ +  Y+ + + L  AGQ   A +L
Sbjct: 663 NVFSFKYLIGAFCKVPDFDMAQEVFETAVSICGQKEGL--YSLMFNELLAAGQLLKATEL 720

Query: 391 FDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCK 450
            + +     E     Y  L+  LCK + ++ A  + H +    + F       +IDGL K
Sbjct: 721 LEAVLDRGFELGTFLYKDLVVSLCKKDELEVASGILHKMIDKGYGFDPAALMPVIDGLGK 780

Query: 451 AGRLDNAWELFHKLPQKGLVPTVV 474
            G    A     K+ +   V  V 
Sbjct: 781 MGNKKEANNFAEKMMEMASVGEVA 804



 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 66/242 (27%), Positives = 119/242 (49%), Gaps = 10/242 (4%)

Query: 350 EEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNV-----EPDLS 404
           EE   L+  I+S+ +++T ++  +LLS +    ++ +  K F + +         +P + 
Sbjct: 56  EEIEELHNLILSSSIQKTKLS--SLLSVVSIFAKSNHIDKAFPQFQFVRSRFPENKPGIY 113

Query: 405 TYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKL 464
            YN+L++   +   V+    L+  + +         FN LI  LC +  +D A ELF ++
Sbjct: 114 LYNVLLESCIRERRVEFVSWLYKDMVLCGISPETYTFNLLIRALCDSSCVDAARELFDEM 173

Query: 465 PQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKT 524
           P+KG  P   T+ I++ G C+ G  +K  + L  ME  G  PN V +NT++  F +  + 
Sbjct: 174 PEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNSMESFGVLPNKVVYNTIVSSFCREGRN 233

Query: 525 SKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKSSYRACLYVTIFQPS 584
               +L+ KM E    LVPD  TF+  +  L K+ K  + S +  S      Y+ + +P+
Sbjct: 234 DDSEKLVEKMRE--EGLVPDIVTFNSRISALCKEGKVLDASRIF-SDMELDEYLGLPRPN 290

Query: 585 SL 586
           S+
Sbjct: 291 SI 292


>gi|297828900|ref|XP_002882332.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297328172|gb|EFH58591.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 790

 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 148/497 (29%), Positives = 241/497 (48%), Gaps = 24/497 (4%)

Query: 78  FNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEAT 137
           +N L   +A+    D +   Y +++   +  D  T N++IN +       C    +KEA 
Sbjct: 160 YNELLTLLARFGLVDEMNQLYTEMLEEFVSMDIYTFNLMINVY-------CKMGFVKEAK 212

Query: 138 WLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYS 197
                MI  G+ PD  T  + I G+CR+ ++  A R+ ++M             N  SY+
Sbjct: 213 QFMCKMIQAGLSPDYFTSTSFILGYCRSKDVDSAFRVFEEM----------PNRNEVSYN 262

Query: 198 IIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDL 257
            +I  LC+ G +D+A  LF+ MK     P V   T LI G C   N  +  GL  EML+ 
Sbjct: 263 QLIHGLCEAGRIDEAVSLFVRMKDDCCYPNVYTYTALIKGLC-RKNVHKAMGLLDEMLER 321

Query: 258 GPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTA 317
              P+L+T+N +I   C+ G ++ A  LL LM +RGL PD+ TY   +D  C   R++ A
Sbjct: 322 NLVPDLITYNSLIAGQCRAGHLDSAYRLLSLMKERGLVPDQRTYGCFIDFLCKSNRVEEA 381

Query: 318 REIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSG 377
           R +F S+  +G    V+ Y++LI+GYCK+  V+EA  L+ +++S        T+N L+ G
Sbjct: 382 RRLFDSLTEEGVSANVIMYSVLIDGYCKVGKVDEAGCLFEKMLSKNCSPNAYTFNALIHG 441

Query: 378 LFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFG 437
           L  AG    A  LFD+M    ++P + T+NILI  + K     +A K    +  +  +  
Sbjct: 442 LCSAGNLKEALSLFDQMVKMGLKPTVYTFNILIGRMLKQGDFDDAHKCLQKMMSSGEKPV 501

Query: 438 IEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLL 497
              +N  I+  C AG++  A ++  ++ ++G+ P   TY+ +I    + G    A D L 
Sbjct: 502 ARTYNAFIEVYCSAGKVQEAEDMMVQMKEEGVPPDDFTYTSLIKAYGKLGLTYSAFDVLK 561

Query: 498 YMEKNGCAPNVVTFNTLMHGFLQN----NKTSKV-VELLHKMAEPERNLVPDDTTFSIVV 552
            M    C P+  TF +L+           K+ +  VE +    +   + +     F IV+
Sbjct: 562 SMFDADCEPSHHTFLSLIKQLFDKRYVVEKSGETGVESVSNFGDVPGSNMWKMMEFDIVI 621

Query: 553 DLLAKDEKYHECSAVSK 569
           +L  + EK H C+  SK
Sbjct: 622 ELFEEMEK-HGCTPDSK 637



 Score =  188 bits (478), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 143/548 (26%), Positives = 238/548 (43%), Gaps = 49/548 (8%)

Query: 38  ETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLF-GAVAKNRHYDAVIS 96
           E   N+ +H  C++G I+  EA   F  M      P + ++  L  G   KN H    + 
Sbjct: 258 EVSYNQLIHGLCEAGRID--EAVSLFVRMKDDCCYPNVYTYTALIKGLCRKNVH--KAMG 313

Query: 97  FYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYG 156
              +++   L+PD +T N LI        G C    +  A  L   M   G+ PD  TYG
Sbjct: 314 LLDEMLERNLVPDLITYNSLI-------AGQCRAGHLDSAYRLLSLMKERGLVPDQRTYG 366

Query: 157 TLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELF 216
             I+  C++  +  A RL   +     E G+    N+  YS++ID  CK G VD+A  LF
Sbjct: 367 CFIDFLCKSNRVEEARRLFDSLT----EEGV--SANVIMYSVLIDGYCKVGKVDEAGCLF 420

Query: 217 LEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKG 276
            +M  +  +P       LIHG C AGN +E   LF +M+ +G +P + TFN++I  + K 
Sbjct: 421 EKMLSKNCSPNAYTFNALIHGLCSAGNLKEALSLFDQMVKMGLKPTVYTFNILIGRMLKQ 480

Query: 277 GKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSY 336
           G  ++A+  L+ M+  G  P   TYN+ ++ YC  G++  A ++ + M  +G      +Y
Sbjct: 481 GDFDDAHKCLQKMMSSGEKPVARTYNAFIEVYCSAGKVQEAEDMMVQMKEEGVPPDDFTY 540

Query: 337 NILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLF-------QAGQAGYAQ- 388
             LI  Y K+     A  + + +       +  T+ +L+  LF       ++G+ G    
Sbjct: 541 TSLIKAYGKLGLTYSAFDVLKSMFDADCEPSHHTFLSLIKQLFDKRYVVEKSGETGVESV 600

Query: 389 ---------------------KLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFH 427
                                +LF+EM+ +   PD   Y  LI G+CK   +  A+KL  
Sbjct: 601 SNFGDVPGSNMWKMMEFDIVIELFEEMEKHGCTPDSKCYEKLISGICKVENLGIALKLLD 660

Query: 428 MLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKG 487
            ++         +FN +I   CK  +   A  +   +   G  P +     +I GL  +G
Sbjct: 661 QMQKEGISPSEMVFNAVISCCCKLQKYGEAANIVEDMICSGHSPQLEHCKTLICGLYEEG 720

Query: 488 KLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTT 547
           + E+ N     +   G   + + +  L+ G L+     +  +L  +M +   N  P   T
Sbjct: 721 ETERGNSVFKKLRGCGYNDDEIAWKILIDGMLKQGLVEEFSQLFEEMEKNGCNFSP--RT 778

Query: 548 FSIVVDLL 555
           +SI+   L
Sbjct: 779 YSILTQKL 786



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 158/603 (26%), Positives = 244/603 (40%), Gaps = 97/603 (16%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
           NE L    + G+++  E    +  M     S  I +FNL+     K         F  K+
Sbjct: 161 NELLTLLARFGLVD--EMNQLYTEMLEEFVSMDIYTFNLMINVYCKMGFVKEAKQFMCKM 218

Query: 102 VSIGLLPDFLTLNILINCFGNKE------------------------RGLCVENRIKEAT 137
           +  GL PD+ T    I  +   +                         GLC   RI EA 
Sbjct: 219 IQAGLSPDYFTSTSFILGYCRSKDVDSAFRVFEEMPNRNEVSYNQLIHGLCEAGRIDEAV 278

Query: 138 WLF----------------------------------KNMIAFGVRPDVITYGTLINGFC 163
            LF                                    M+   + PD+ITY +LI G C
Sbjct: 279 SLFVRMKDDCCYPNVYTYTALIKGLCRKNVHKAMGLLDEMLERNLVPDLITYNSLIAGQC 338

Query: 164 RTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRG 223
           R G+L  A RL   M     E GL+      +Y   ID LCK   V++A+ LF  +   G
Sbjct: 339 RAGHLDSAYRLLSLM----KERGLVPDQR--TYGCFIDFLCKSNRVEEARRLFDSLTEEG 392

Query: 224 INPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEAN 283
           ++  V++ + LI G+C  G  +E   LF +ML     PN  TFN +I  LC  G + EA 
Sbjct: 393 VSANVIMYSVLIDGYCKVGKVDEAGCLFEKMLSKNCSPNAYTFNALIHGLCSAGNLKEAL 452

Query: 284 GLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGY 343
            L + M++ GL P  +T+N L+      G  D A +    M S G K    +YN  I  Y
Sbjct: 453 SLFDQMVKMGLKPTVYTFNILIGRMLKQGDFDDAHKCLQKMMSSGEKPVARTYNAFIEVY 512

Query: 344 CKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDL 403
           C    V+EA  +  Q+   GV     TY +L+    + G    A  +   M   + EP  
Sbjct: 513 CSAGKVQEAEDMMVQMKEEGVPPDDFTYTSLIKAYGKLGLTYSAFDVLKSMFDADCEPSH 572

Query: 404 STYNILIDGLCKNNCV--------QEAVKLF------HMLEMNKFEFGIEIFN------C 443
            T+  LI  L     V         E+V  F      +M +M +F+  IE+F       C
Sbjct: 573 HTFLSLIKQLFDKRYVVEKSGETGVESVSNFGDVPGSNMWKMMEFDIVIELFEEMEKHGC 632

Query: 444 ---------LIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKAND 494
                    LI G+CK   L  A +L  ++ ++G+ P+ + ++ +I   C+  K  +A +
Sbjct: 633 TPDSKCYEKLISGICKVENLGIALKLLDQMQKEGISPSEMVFNAVISCCCKLQKYGEAAN 692

Query: 495 FLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDL 554
            +  M  +G +P +    TL+ G  +  +T +   +  K+     N   D+  + I++D 
Sbjct: 693 IVEDMICSGHSPQLEHCKTLICGLYEEGETERGNSVFKKLRGCGYN--DDEIAWKILIDG 750

Query: 555 LAK 557
           + K
Sbjct: 751 MLK 753



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 95/337 (28%), Positives = 160/337 (47%), Gaps = 37/337 (10%)

Query: 262 NLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIF 321
           +L  +N ++  L + G ++E N L   M++  ++ D +T+N +++ YC +G +  A++  
Sbjct: 156 SLKCYNELLTLLARFGLVDEMNQLYTEMLEEFVSMDIYTFNLMINVYCKMGFVKEAKQFM 215

Query: 322 LSMHSKG---------------CK----------------HTVVSYNILINGYCKILNVE 350
             M   G               C+                   VSYN LI+G C+   ++
Sbjct: 216 CKMIQAGLSPDYFTSTSFILGYCRSKDVDSAFRVFEEMPNRNEVSYNQLIHGLCEAGRID 275

Query: 351 EAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILI 410
           EA+SL+ ++  +     V TY  L+ GL +      A  L DEM   N+ PDL TYN LI
Sbjct: 276 EAVSLFVRMKDDCCYPNVYTYTALIKGLCRK-NVHKAMGLLDEMLERNLVPDLITYNSLI 334

Query: 411 DGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLV 470
            G C+   +  A +L  +++          + C ID LCK+ R++ A  LF  L ++G+ 
Sbjct: 335 AGQCRAGHLDSAYRLLSLMKERGLVPDQRTYGCFIDFLCKSNRVEEARRLFDSLTEEGVS 394

Query: 471 PTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVEL 530
             V+ YS++I G C+ GK+++A      M    C+PN  TFN L+HG        + + L
Sbjct: 395 ANVIMYSVLIDGYCKVGKVDEAGCLFEKMLSKNCSPNAYTFNALIHGLCSAGNLKEALSL 454

Query: 531 LHKMAEPERNLVPDDTTFSIVVDLLAKDEKY---HEC 564
             +M   +  L P   TF+I++  + K   +   H+C
Sbjct: 455 FDQMV--KMGLKPTVYTFNILIGRMLKQGDFDDAHKC 489



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 71/234 (30%), Positives = 114/234 (48%), Gaps = 7/234 (2%)

Query: 330 KHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQK 389
           K ++  YN L+    +   V+E   LY +++   V   + T+N +++   + G    A++
Sbjct: 154 KLSLKCYNELLTLLARFGLVDEMNQLYTEMLEEFVSMDIYTFNLMINVYCKMGFVKEAKQ 213

Query: 390 LFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLC 449
              +M    + PD  T    I G C++  V  A ++F  +  N+ E     +N LI GLC
Sbjct: 214 FMCKMIQAGLSPDYFTSTSFILGYCRSKDVDSAFRVFEEMP-NRNEVS---YNQLIHGLC 269

Query: 450 KAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVV 509
           +AGR+D A  LF ++      P V TY+ +I GLCRK  + KA   L  M +    P+++
Sbjct: 270 EAGRIDEAVSLFVRMKDDCCYPNVYTYTALIKGLCRKN-VHKAMGLLDEMLERNLVPDLI 328

Query: 510 TFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
           T+N+L+ G  +         LL  M   ER LVPD  T+   +D L K  +  E
Sbjct: 329 TYNSLIAGQCRAGHLDSAYRLLSLMK--ERGLVPDQRTYGCFIDFLCKSNRVEE 380


>gi|297809453|ref|XP_002872610.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297318447|gb|EFH48869.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 575

 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 119/372 (31%), Positives = 197/372 (52%), Gaps = 2/372 (0%)

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
           +++S+ I+I   C+ G ++K+ +L +E++  G +P VV+ TTLI G C  G  E+   LF
Sbjct: 162 DVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLF 221

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
            EM   G   N  T+ V+I  L K G   +   + E M + G+ P+ +TYN +M+  C  
Sbjct: 222 FEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLYTYNCVMNQLCKD 281

Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
           GR   A ++F  M  +G    +V+YN LI G C+ +   EA  +  Q+ S  +   +ITY
Sbjct: 282 GRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSYVINPNLITY 341

Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
           NTL+ G    G+ G A  L  ++K   + P L TYN+L+ G C+      A K+   +E 
Sbjct: 342 NTLIDGFCSVGKLGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDTSGAAKMVKEMEE 401

Query: 432 NKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEK 491
              +     +  LID   ++  ++ A +L   + + GLVP V TYS++IHG C KG++ +
Sbjct: 402 RGIKPSKVTYTILIDTFARSDNMETAIQLRSSMEELGLVPDVHTYSVLIHGFCIKGQMNE 461

Query: 492 ANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIV 551
           A+     M +    PN V +NT++ G+ +   + + + L   M E E  L P+  ++S +
Sbjct: 462 ASRLFKSMVEKMLEPNEVIYNTMILGYCKEGSSYRALRLFRDMEEKE--LAPNVASYSYL 519

Query: 552 VDLLAKDEKYHE 563
           + +L K+ K  E
Sbjct: 520 IRVLCKERKLKE 531



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 138/488 (28%), Positives = 247/488 (50%), Gaps = 17/488 (3%)

Query: 65  YMTHMQPSPPISS-FNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNK 123
           Y+T  + S   S  + ++  A  +++  D+ I ++ ++V  G +P         NCF N 
Sbjct: 83  YLTESETSKTKSRLYEVIINAYVQSQSLDSSIYYFNEMVDKGFVPG-------SNCFNNL 135

Query: 124 ERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDY 183
                V +      W F N     V  DV ++G +I G C  G +  +  L  ++    +
Sbjct: 136 -LTFVVGSSSFNQWWCFFNESKIKVVLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGF 194

Query: 184 ENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGN 243
                   N+  Y+ +ID  CK+G ++KAK+LF EM   G+       T LIHG    G 
Sbjct: 195 S------PNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGI 248

Query: 244 WEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNS 303
            ++   ++ +M + G  PNL T+N +++ LCK G+  +A  + + M +RG++ +  TYN+
Sbjct: 249 KKQGFEMYEKMQEHGVFPNLYTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNT 308

Query: 304 LMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNG 363
           L+ G C   + + A ++   M S      +++YN LI+G+C +  + +A+SL R + S G
Sbjct: 309 LIGGLCREMKANEANKVMDQMKSYVINPNLITYNTLIDGFCSVGKLGKALSLCRDLKSRG 368

Query: 364 VRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAV 423
           +  +++TYN L+SG  + G    A K+  EM+   ++P   TY ILID   +++ ++ A+
Sbjct: 369 LSPSLVTYNVLVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMETAI 428

Query: 424 KLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGL 483
           +L   +E       +  ++ LI G C  G+++ A  LF  + +K L P  V Y+ MI G 
Sbjct: 429 QLRSSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKMLEPNEVIYNTMILGY 488

Query: 484 CRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVP 543
           C++G   +A      ME+   APNV +++ L+    +  K  +  +L+ KM +    + P
Sbjct: 489 CKEGSSYRALRLFRDMEEKELAPNVASYSYLIRVLCKERKLKEAEDLVEKMIDS--GIDP 546

Query: 544 DDTTFSIV 551
            DT  +++
Sbjct: 547 SDTICNLI 554



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 111/391 (28%), Positives = 194/391 (49%), Gaps = 21/391 (5%)

Query: 189 SKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPA---------VVVCTTLIHGFC 239
           SKT    Y +II++  +   +D +   F EM  +G  P           VV ++  + + 
Sbjct: 90  SKTKSRLYEVIINAYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWW 149

Query: 240 CAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRF 299
           C  N  ++  +           ++ +F ++I   C+ G+I ++  LL  + + G +P+  
Sbjct: 150 CFFNESKIKVVL----------DVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVV 199

Query: 300 TYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQI 359
            Y +L+DG C  G I+ A+++F  M   G      +Y +LI+G  K    ++   +Y ++
Sbjct: 200 IYTTLIDGCCKKGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKM 259

Query: 360 ISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCV 419
             +GV   + TYN +++ L + G+   A K+FDEM+   V  ++ TYN LI GLC+    
Sbjct: 260 QEHGVFPNLYTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKA 319

Query: 420 QEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIM 479
            EA K+   ++       +  +N LIDG C  G+L  A  L   L  +GL P++VTY+++
Sbjct: 320 NEANKVMDQMKSYVINPNLITYNTLIDGFCSVGKLGKALSLCRDLKSRGLSPSLVTYNVL 379

Query: 480 IHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPER 539
           + G CRKG    A   +  ME+ G  P+ VT+  L+  F +++     ++L   M   E 
Sbjct: 380 VSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMETAIQLRSSM--EEL 437

Query: 540 NLVPDDTTFSIVVDLLAKDEKYHECSAVSKS 570
            LVPD  T+S+++       + +E S + KS
Sbjct: 438 GLVPDVHTYSVLIHGFCIKGQMNEASRLFKS 468



 Score =  112 bits (279), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 71/240 (29%), Positives = 117/240 (48%), Gaps = 13/240 (5%)

Query: 57  NEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNIL 116
           NEA      M     +P + ++N L             +S  R L S GL P  +T N+L
Sbjct: 320 NEANKVMDQMKSYVINPNLITYNTLIDGFCSVGKLGKALSLCRDLKSRGLSPSLVTYNVL 379

Query: 117 INCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHK 176
           ++       G C +     A  + K M   G++P  +TY  LI+ F R+ N+  A++L  
Sbjct: 380 VS-------GFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMETAIQLRS 432

Query: 177 KMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIH 236
            M     E GL+   ++ +YS++I   C +G +++A  LF  M  + + P  V+  T+I 
Sbjct: 433 SM----EELGLVP--DVHTYSVLIHGFCIKGQMNEASRLFKSMVEKMLEPNEVIYNTMIL 486

Query: 237 GFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNP 296
           G+C  G+      LF +M +    PN+ +++ +I  LCK  K+ EA  L+E MI  G++P
Sbjct: 487 GYCKEGSSYRALRLFRDMEEKELAPNVASYSYLIRVLCKERKLKEAEDLVEKMIDSGIDP 546


>gi|255572426|ref|XP_002527150.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223533489|gb|EEF35232.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 874

 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 166/576 (28%), Positives = 269/576 (46%), Gaps = 45/576 (7%)

Query: 20  KLSSLFKSPRQIAAVSSPETQLNEFLHENC-KSGIINLNEARYFFGYMTHMQPSPPISSF 78
           K  S FKS R       P   L   L ++C +   + L    + +  M   + SP   +F
Sbjct: 93  KAISHFKSLRSNFPEKQPSIYLYNVLLKSCIRENRVEL--VSWLYKDMVLARVSPEAYTF 150

Query: 79  NLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATW 138
           NLL G +  + H +     + K+ + G  P+  T  IL+       RG C      +   
Sbjct: 151 NLLIGLLCDSGHLEDARELFDKMPARGCEPNEFTFGILV-------RGYCRAGLASKGLE 203

Query: 139 LFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSI 198
           L   M   G+ P+ + Y TLI+ FC+ G    A +L  KM     E+GL+     F+   
Sbjct: 204 LLGQMRTMGILPNNVLYNTLISSFCKEGKTHDAEKLVDKM----REDGLVPHVETFNSR- 258

Query: 199 IIDSLCKEGLVDKAKELFLEMK---GRGI-NPAVVVCTTLIHGFCCAGNWEEVNGLFIEM 254
            I +LC  G + +A  +F +M+     G+ +P V+    ++ GFC  G  EE   L   M
Sbjct: 259 -ISALCGSGKILEASRIFRDMQIDEELGLPHPNVITYKLMLMGFCKEGMLEEAKTLVDTM 317

Query: 255 LDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRI 314
                  NL ++N+ +  L + GK+ EA  +L+ M+  G+ PD ++YN +MDG C  G +
Sbjct: 318 KRNANFINLESYNIWLLGLIRNGKLLEAWIVLKEMLGIGIEPDIYSYNIVMDGLCKNGML 377

Query: 315 DTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTL 374
             AR +   M   G     V+Y+ L++GYC    V EA +L  ++ISN       T N L
Sbjct: 378 SDARMLMGLMIRNGILPDTVTYSTLLHGYCSKGKVFEANNLLHEMISNNCSPNTYTCNVL 437

Query: 375 LSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFH-MLEMNK 433
           L  L++ G+   A+ L  +M       D  T NI+I+ LC N  + +A+++ + M     
Sbjct: 438 LHSLWKEGRISEAENLLQKMNEKGYGVDTVTCNIIINALCNNGQLDKAIEIVNGMWTHGS 497

Query: 434 FEFG----------------------IEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVP 471
              G                      +  ++ +I GLCKAGRLD+A + F ++  KGL P
Sbjct: 498 AALGNLGNSFIGLVDDTISGKKCTPDLVTYSTIISGLCKAGRLDDAKKKFIEMMSKGLQP 557

Query: 472 TVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELL 531
               Y   IH  CR+GK+  A   L  MEK GC   + T+N+L+ G    N+  ++  L+
Sbjct: 558 DSAIYDTFIHSFCREGKISSAFQVLKDMEKRGCNKTLQTYNSLILGLGSKNQIFELYGLI 617

Query: 532 HKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAV 567
            +M   E+ + PD  T++ +++ L +  + ++  +V
Sbjct: 618 DEMR--EKGVSPDVCTYNHMLNCLCEGGRINDAPSV 651



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 138/512 (26%), Positives = 243/512 (47%), Gaps = 41/512 (8%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNL-LFGAVAKNRHYDAVISFYRKLVSIGLL 107
           CK G+  L EA+     M        + S+N+ L G +   +  +A I   ++++ IG+ 
Sbjct: 302 CKEGM--LEEAKTLVDTMKRNANFINLESYNIWLLGLIRNGKLLEAWIVL-KEMLGIGIE 358

Query: 108 PDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGN 167
           PD  + NI+++       GLC    + +A  L   MI  G+ PD +TY TL++G+C  G 
Sbjct: 359 PDIYSYNIVMD-------GLCKNGMLSDARMLMGLMIRNGILPDTVTYSTLLHGYCSKGK 411

Query: 168 LSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPA 227
           +  A  L  +M+S +         N ++ ++++ SL KEG + +A+ L  +M  +G    
Sbjct: 412 VFEANNLLHEMISNN------CSPNTYTCNVLLHSLWKEGRISEAENLLQKMNEKGYGVD 465

Query: 228 VVVCTTLIHGFCCAGNWEE----VNGL--------------FIEMLD---LGPR--PNLL 264
            V C  +I+  C  G  ++    VNG+              FI ++D    G +  P+L+
Sbjct: 466 TVTCNIIINALCNNGQLDKAIEIVNGMWTHGSAALGNLGNSFIGLVDDTISGKKCTPDLV 525

Query: 265 TFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSM 324
           T++ +I  LCK G++++A      M+ +GL PD   Y++ +  +C  G+I +A ++   M
Sbjct: 526 TYSTIISGLCKAGRLDDAKKKFIEMMSKGLQPDSAIYDTFIHSFCREGKISSAFQVLKDM 585

Query: 325 HSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQA 384
             +GC  T+ +YN LI G      + E   L  ++   GV   V TYN +L+ L + G+ 
Sbjct: 586 EKRGCNKTLQTYNSLILGLGSKNQIFELYGLIDEMREKGVSPDVCTYNHMLNCLCEGGRI 645

Query: 385 GYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCL 444
             A  + DEM    + P++S++ ILI   CK    + + ++F  + +N       ++  +
Sbjct: 646 NDAPSVLDEMLQKGISPNISSFRILIKAFCKACDFKASHEVFE-IALNVCGHKEALYTLM 704

Query: 445 IDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGC 504
            + L   G++  A ELF     +        Y  +I  LC+  KLE A+D L  +   G 
Sbjct: 705 FNELLVGGKVAEAKELFETALDRSFDIGNFLYKDLIDRLCKDEKLEAASDVLHRLIDKGY 764

Query: 505 APNVVTFNTLMHGFLQNNKTSKVVELLHKMAE 536
             +  +F  ++ GF +        EL  +M E
Sbjct: 765 QFDPASFMPVIDGFGKMGNKHVADELAERMME 796



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 138/492 (28%), Positives = 231/492 (46%), Gaps = 48/492 (9%)

Query: 81  LFGAVAKNRHYDAVISFYRKLVS--IGLLPDFLTLNILINCFGNKERGLCV-ENRIKEAT 137
           L   +AK+  ++  IS ++ L S      P     N+L+          C+ ENR++  +
Sbjct: 81  LVTVLAKSGFFNKAISHFKSLRSNFPEKQPSIYLYNVLLKS--------CIRENRVELVS 132

Query: 138 WLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYS 197
           WL+K+M+   V P+  T+  LI   C +G+L  A  L  KM +   E       N F++ 
Sbjct: 133 WLYKDMVLARVSPEAYTFNLLIGLLCDSGHLEDARELFDKMPARGCE------PNEFTFG 186

Query: 198 IIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDL 257
           I++   C+ GL  K  EL  +M+  GI P  V+  TLI  FC  G   +   L  +M + 
Sbjct: 187 ILVRGYCRAGLASKGLELLGQMRTMGILPNNVLYNTLISSFCKEGKTHDAEKLVDKMRED 246

Query: 258 GPRPNLLTFNVMIDCLCKGGKINEANGLL-ELMIQRGL---NPDRFTYNSLMDGYCLVGR 313
           G  P++ TFN  I  LC  GKI EA+ +  ++ I   L   +P+  TY  ++ G+C  G 
Sbjct: 247 GLVPHVETFNSRISALCGSGKILEASRIFRDMQIDEELGLPHPNVITYKLMLMGFCKEGM 306

Query: 314 IDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNT 373
           ++ A+ +  +M        + SYNI + G  +   + EA  + ++++  G+   + +YN 
Sbjct: 307 LEEAKTLVDTMKRNANFINLESYNIWLLGLIRNGKLLEAWIVLKEMLGIGIEPDIYSYNI 366

Query: 374 LLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNK 433
           ++ GL + G    A+ L   M    + PD  TY+ L+ G C    V EA  L H +  N 
Sbjct: 367 VMDGLCKNGMLSDARMLMGLMIRNGILPDTVTYSTLLHGYCSKGKVFEANNLLHEMISNN 426

Query: 434 FEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKAN 493
                   N L+  L K GR+  A  L  K+ +KG     VT +I+I+ LC  G+L+KA 
Sbjct: 427 CSPNTYTCNVLLHSLWKEGRISEAENLLQKMNEKGYGVDTVTCNIIINALCNNGQLDKAI 486

Query: 494 DFLLYMEKNG-----------------------CAPNVVTFNTLMHGFLQ----NNKTSK 526
           + +  M  +G                       C P++VT++T++ G  +    ++   K
Sbjct: 487 EIVNGMWTHGSAALGNLGNSFIGLVDDTISGKKCTPDLVTYSTIISGLCKAGRLDDAKKK 546

Query: 527 VVELLHKMAEPE 538
            +E++ K  +P+
Sbjct: 547 FIEMMSKGLQPD 558



 Score = 55.5 bits (132), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 61/259 (23%), Positives = 113/259 (43%), Gaps = 44/259 (16%)

Query: 36  SPETQL-NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFN-LLFGAVAKNRHYDA 93
            P++ + + F+H  C+ G I+   A      M     +  + ++N L+ G  +KN+ ++ 
Sbjct: 556 QPDSAIYDTFIHSFCREGKIS--SAFQVLKDMEKRGCNKTLQTYNSLILGLGSKNQIFE- 612

Query: 94  VISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVI 153
           +     ++   G+ PD  T N ++NC       LC   RI +A  +   M+  G+ P++ 
Sbjct: 613 LYGLIDEMREKGVSPDVCTYNHMLNC-------LCEGGRINDAPSVLDEMLQKGISPNIS 665

Query: 154 TYGTLINGFCRTGNL-------SVALRL--HKK----------MVSGD-------YENGL 187
           ++  LI  FC+  +         +AL +  HK+          +V G        +E  L
Sbjct: 666 SFRILIKAFCKACDFKASHEVFEIALNVCGHKEALYTLMFNELLVGGKVAEAKELFETAL 725

Query: 188 ISKTNI--FSYSIIIDSLCKEGLVDKAKELFLEM--KGRGINPAVVVCTTLIHGFCCAGN 243
               +I  F Y  +ID LCK+  ++ A ++   +  KG   +PA  +   +I GF   GN
Sbjct: 726 DRSFDIGNFLYKDLIDRLCKDEKLEAASDVLHRLIDKGYQFDPASFM--PVIDGFGKMGN 783

Query: 244 WEEVNGLFIEMLDLGPRPN 262
               + L   M+++    N
Sbjct: 784 KHVADELAERMMEMASESN 802


>gi|218195055|gb|EEC77482.1| hypothetical protein OsI_16315 [Oryza sativa Indica Group]
          Length = 455

 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 132/415 (31%), Positives = 215/415 (51%), Gaps = 17/415 (4%)

Query: 112 TLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVA 171
           T NI++       R LC   +   A  L + M     RP+ +TY T+I GFC  G +  A
Sbjct: 43  TFNIML-------RHLCSAGKPARALELLRQM----PRPNAVTYNTVIAGFCSRGRVQAA 91

Query: 172 LRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRG-INPAVVV 230
           L + ++M     E G I+  N ++Y  +I   CK G VD+A ++F EM  +G + P  V+
Sbjct: 92  LDIMREM----RERGGIAP-NQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVM 146

Query: 231 CTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMI 290
              LI G+C  G  +        M++ G    + T+N+++  L   G+  EA  L+E M 
Sbjct: 147 YNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMG 206

Query: 291 QRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVE 350
            +GL PD FTYN L++G+C  G +  A EIF +M  +G + TVV+Y  LI    K   V+
Sbjct: 207 GKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQ 266

Query: 351 EAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILI 410
           E   L+ + +  G+R  ++ YN L++    +G    A ++  EM+   + PD  TYN L+
Sbjct: 267 ETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLM 326

Query: 411 DGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLV 470
            GLC    V EA KL   +     +  +  +N LI G    G + +A  + +++  KG  
Sbjct: 327 RGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFN 386

Query: 471 PTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTS 525
           PT++TY+ +I GLC+ G+ + A + +  M +NG  P+  T+ +L+ G    ++ +
Sbjct: 387 PTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTEDERA 441



 Score =  214 bits (546), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 132/428 (30%), Positives = 214/428 (50%), Gaps = 15/428 (3%)

Query: 136 ATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFS 195
           A  LF +M    +     T+  ++   C  G  + AL L ++M           + N  +
Sbjct: 25  AFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQM----------PRPNAVT 74

Query: 196 YSIIIDSLCKEGLVDKAKELFLEMKGRG-INPAVVVCTTLIHGFCCAGNWEEVNGLFIEM 254
           Y+ +I   C  G V  A ++  EM+ RG I P      T+I G+C  G  +E   +F EM
Sbjct: 75  YNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEM 134

Query: 255 LDLGP-RPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGR 313
           L  G  +P  + +N +I   C  GK++ A    + M++RG+     TYN L+    + GR
Sbjct: 135 LTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGR 194

Query: 314 IDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNT 373
              A E+   M  KG    V +YNILING+CK  NV++A+ ++  +   GVR TV+TY +
Sbjct: 195 GTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTS 254

Query: 374 LLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNK 433
           L+  L + GQ     KLFDE     + PDL  YN LI+    +  +  A ++   +E  +
Sbjct: 255 LIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKR 314

Query: 434 FEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKAN 493
                  +N L+ GLC  GR+D A +L  ++ ++G+ P +VTY+ +I G   KG ++ A 
Sbjct: 315 IAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDAL 374

Query: 494 DFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTF-SIVV 552
                M   G  P ++T+N L+ G  +N +      ++ +M   E  + PDD+T+ S++ 
Sbjct: 375 RIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMV--ENGITPDDSTYISLIE 432

Query: 553 DLLAKDEK 560
            L  +DE+
Sbjct: 433 GLTTEDER 440



 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 110/357 (30%), Positives = 177/357 (49%), Gaps = 37/357 (10%)

Query: 230 VCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELM 289
           + T  +H    A        LF +M  L       TFN+M+  LC  GK   A  LL  M
Sbjct: 8   ISTASLHPLLSALPSAPAFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQM 67

Query: 290 --------------------------IQR------GLNPDRFTYNSLMDGYCLVGRIDTA 317
                                     I R      G+ P+++TY +++ G+C VGR+D A
Sbjct: 68  PRPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEA 127

Query: 318 REIFLSMHSKG-CKHTVVSYNILINGYCKILNVEEAMSLYR-QIISNGVRQTVITYNTLL 375
            ++F  M +KG  K   V YN LI GYC    ++ A+ LYR +++  GV  TV TYN L+
Sbjct: 128 VKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTAL-LYRDRMVERGVAMTVATYNLLV 186

Query: 376 SGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFE 435
             LF  G+   A +L +EM    + PD+ TYNILI+G CK   V++A+++F  +      
Sbjct: 187 HALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVR 246

Query: 436 FGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDF 495
             +  +  LI  L K G++    +LF +  ++G+ P +V Y+ +I+     G +++A + 
Sbjct: 247 ATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEI 306

Query: 496 LLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVV 552
           +  MEK   AP+ VT+NTLM G     +  +  +L+ +M   +R + PD  T++ ++
Sbjct: 307 MGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMT--KRGIQPDLVTYNTLI 361



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 90/307 (29%), Positives = 142/307 (46%), Gaps = 16/307 (5%)

Query: 37  PETQL-NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVI 95
           PE  + N  +   C  G   L+ A  +   M     +  ++++NLL  A+  +       
Sbjct: 142 PEAVMYNALIGGYCDQG--KLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAY 199

Query: 96  SFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITY 155
               ++   GL PD  T NILIN       G C E  +K+A  +F+NM   GVR  V+TY
Sbjct: 200 ELVEEMGGKGLAPDVFTYNILIN-------GHCKEGNVKKALEIFENMSRRGVRATVVTY 252

Query: 156 GTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKEL 215
            +LI    + G +    +L  + V      G+  + ++  Y+ +I+S    G +D+A E+
Sbjct: 253 TSLIYALSKKGQVQETDKLFDEAV----RRGI--RPDLVLYNALINSHSTSGNIDRAFEI 306

Query: 216 FLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCK 275
             EM+ + I P  V   TL+ G C  G  +E   L  EM   G +P+L+T+N +I     
Sbjct: 307 MGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSM 366

Query: 276 GGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVS 335
            G + +A  +   M+ +G NP   TYN+L+ G C  G+ D A  +   M   G      +
Sbjct: 367 KGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDST 426

Query: 336 YNILING 342
           Y  LI G
Sbjct: 427 YISLIEG 433



 Score = 46.2 bits (108), Expect = 0.053,   Method: Compositional matrix adjust.
 Identities = 29/107 (27%), Positives = 47/107 (43%), Gaps = 7/107 (6%)

Query: 56  LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNI 115
           ++EAR     MT     P + ++N L    +        +    ++++ G  P  LT N 
Sbjct: 335 VDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNA 394

Query: 116 LINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGF 162
           LI       +GLC   +  +A  + K M+  G+ PD  TY +LI G 
Sbjct: 395 LI-------QGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGL 434


>gi|359481393|ref|XP_002276762.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g32630-like [Vitis vinifera]
          Length = 625

 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 133/435 (30%), Positives = 231/435 (53%), Gaps = 19/435 (4%)

Query: 84  AVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNM 143
           A+ +    D+ + F+R++V++ +     +L I+++       GLC    ++    L   +
Sbjct: 199 ALRRGGQVDSCLRFFRRMVNLDVEVTVYSLTIVLD-------GLCKRGDVEMGRKLMDEV 251

Query: 144 IAFGVRPDVITYGTLINGFCRT---GNLSVALRLHKKMVSGDYENGLISKTNIFSYSIII 200
            A GV+ +V+TY   I G+ +    G ++  L L +K        G+    N+ +Y+++I
Sbjct: 252 AAKGVKANVVTYNAFIEGYFKRLDLGGVAEILTLMEK-------EGV--ACNVVTYTLLI 302

Query: 201 DSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPR 260
                 G +++A+ LF EM+ +GI   V V T++I   C +GN +    LF EM D G  
Sbjct: 303 HGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKGLI 362

Query: 261 PNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREI 320
           P+  T+  +I  +CK G++  A  L+  M  +G++ +   +N+L+DGYC  G +D A  +
Sbjct: 363 PSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRL 422

Query: 321 FLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQ 380
            + M  KG +  V +YN + +G CK+   +EA  L   ++  GV    +++ TL+    +
Sbjct: 423 QVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCK 482

Query: 381 AGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEI 440
            G    A+++F EM+     P++ TYN+LIDG  K   ++EA KL   LE       +  
Sbjct: 483 EGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRGLIPDVYT 542

Query: 441 FNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYME 500
              LI G C  G++D A +LF ++PQ+GLVP VVTY+ MI GL + G+ E+A      M+
Sbjct: 543 CTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEAFKLYDEMK 602

Query: 501 KNGCAPNVVTFNTLM 515
           + G  P+   +++L+
Sbjct: 603 ETGLTPDDTVYSSLV 617



 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 139/482 (28%), Positives = 232/482 (48%), Gaps = 15/482 (3%)

Query: 78  FNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEAT 137
           F+LLF   A N+ +   +  +  +   G   D  +  + +       RG  V++ ++   
Sbjct: 158 FDLLFRVYADNKMFGEALEAFEHMEKKGFHIDERSCLVYLLAL---RRGGQVDSCLR--- 211

Query: 138 WLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYS 197
             F+ M+   V   V +   +++G C+ G++ +  +L  ++ +     G+  K N+ +Y+
Sbjct: 212 -FFRRMVNLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAA----KGV--KANVVTYN 264

Query: 198 IIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDL 257
             I+   K   +    E+   M+  G+   VV  T LIHGF   G  EE   LF EM + 
Sbjct: 265 AFIEGYFKRLDLGGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREK 324

Query: 258 GPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTA 317
           G   ++  +  +I C C+ G +  A  L + M  +GL P   TY +L+ G C  G+++ A
Sbjct: 325 GIEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAA 384

Query: 318 REIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSG 377
           + +   M  KG     V +N LI+GYC+   V+EA+ L   +   G+   V  YN++ SG
Sbjct: 385 QMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASG 444

Query: 378 LFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFG 437
           L +  +   A+ L   M    V P+  ++  LID  CK     EA ++F  +E       
Sbjct: 445 LCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPN 504

Query: 438 IEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLL 497
           I  +N LIDG  K G +  A +L  +L  +GL+P V T + +IHG C  GK++ A     
Sbjct: 505 IITYNVLIDGYSKRGNMKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFD 564

Query: 498 YMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAK 557
            M + G  PNVVT+  ++ G  ++ ++ +  +L  +M E    L PDDT +S +V  L  
Sbjct: 565 EMPQRGLVPNVVTYTAMISGLSKDGRSEEAFKLYDEMKET--GLTPDDTVYSSLVGSLHS 622

Query: 558 DE 559
            E
Sbjct: 623 AE 624



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 124/430 (28%), Positives = 208/430 (48%), Gaps = 8/430 (1%)

Query: 135 EATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIF 194
           EA   F++M   G   D  +    +    R G +   LR  ++MV+ D E        ++
Sbjct: 173 EALEAFEHMEKKGFHIDERSCLVYLLALRRGGQVDSCLRFFRRMVNLDVE------VTVY 226

Query: 195 SYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEM 254
           S +I++D LCK G V+  ++L  E+  +G+   VV     I G+    +   V  +   M
Sbjct: 227 SLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAEILTLM 286

Query: 255 LDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRI 314
              G   N++T+ ++I      GKI EA  L E M ++G+  D + Y S++   C  G +
Sbjct: 287 EKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNV 346

Query: 315 DTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTL 374
             A  +F  M  KG   +  +Y  LI+G CK   +E A  L  ++   G+    + +NTL
Sbjct: 347 KRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTL 406

Query: 375 LSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKF 434
           + G  ++G    A +L   M+   +E D+  YN +  GLCK N   EA  L   +     
Sbjct: 407 IDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGV 466

Query: 435 EFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKAND 494
                 F  LID  CK G    A  +F ++ +KG VP ++TY+++I G  ++G +++A+ 
Sbjct: 467 SPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHK 526

Query: 495 FLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDL 554
               +E  G  P+V T  +L+HG   + K    ++L  +M  P+R LVP+  T++ ++  
Sbjct: 527 LKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEM--PQRGLVPNVVTYTAMISG 584

Query: 555 LAKDEKYHEC 564
           L+KD +  E 
Sbjct: 585 LSKDGRSEEA 594



 Score = 62.0 bits (149), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 42/147 (28%), Positives = 67/147 (45%), Gaps = 13/147 (8%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CK G  N  EA+  F  M      P I ++N+L    +K  +         +L + GL+P
Sbjct: 481 CKEG--NFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRGLIP 538

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           D  T   LI+       G C++ ++  A  LF  M   G+ P+V+TY  +I+G  + G  
Sbjct: 539 DVYTCTSLIH-------GECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRS 591

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFS 195
             A +L+ +M     E GL     ++S
Sbjct: 592 EEAFKLYDEM----KETGLTPDDTVYS 614


>gi|357473123|ref|XP_003606846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355507901|gb|AES89043.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 624

 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 123/435 (28%), Positives = 225/435 (51%), Gaps = 15/435 (3%)

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
           IK A ++++ M+   ++  ++T+  +IN  CR G    A    K  +      G+  K N
Sbjct: 198 IKMAWFVYEEMVKMNIKSSIVTFNIMINILCREGKWKKA----KDFIGHMEVYGV--KPN 251

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
           + +Y+ +I+  C  G  + A ++F  MK + + P      + I   C     EE +G+  
Sbjct: 252 VVTYNTVINGYCLRGKFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLC 311

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
           ++L+ G  PN +T+N +ID  C  G +++A    + M+ RG+    FTYN L+    L  
Sbjct: 312 KLLESGLVPNAVTYNALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEK 371

Query: 313 RIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYN 372
           RI+ A ++   M  KG +  VV+YNI INGYC+  N ++A+SL+ +++   +R TV TY 
Sbjct: 372 RIEEAEDMIKEMREKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYT 431

Query: 373 TLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMN 432
           +L+    +  +   A++ F +     + PD+  +N LIDG C N  +  A +L   ++  
Sbjct: 432 SLIDVFGKRNRMSEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNA 491

Query: 433 KFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKA 492
           K       FN L+ G C+  +++ A +L  ++ ++G+ P  ++Y+ +I G  ++G ++ A
Sbjct: 492 KVVPDEVTFNTLMQGYCRERKVEEAKKLLDEMKERGIKPDHISYNTLISGYSKRGDMKDA 551

Query: 493 NDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVV 552
            +    M   G  P ++T+N L+ G+ +  +     ELL +M    + + PDD+T+  V+
Sbjct: 552 LEVFDEMLSLGFDPTLLTYNALIQGYSKIGEADHAEELLREMQ--SKGITPDDSTYLYVI 609

Query: 553 -------DLLAKDEK 560
                  DL+  D+K
Sbjct: 610 EAMKTNDDLVENDDK 624



 Score =  208 bits (529), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 125/425 (29%), Positives = 214/425 (50%), Gaps = 13/425 (3%)

Query: 98  YRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGT 157
           Y ++V + +    +T NI+IN        LC E + K+A     +M  +GV+P+V+TY T
Sbjct: 205 YEEMVKMNIKSSIVTFNIMINI-------LCREGKWKKAKDFIGHMEVYGVKPNVVTYNT 257

Query: 158 LINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFL 217
           +ING+C  G    A ++ K M   +       K + ++Y+  I  LCKE  +++A  +  
Sbjct: 258 VINGYCLRGKFEAASKIFKTMKDKNL------KPDCYTYNSFISRLCKERRIEEASGVLC 311

Query: 218 EMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGG 277
           ++   G+ P  V    LI G C  G+ ++      EM++ G   ++ T+N++I  L    
Sbjct: 312 KLLESGLVPNAVTYNALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEK 371

Query: 278 KINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYN 337
           +I EA  +++ M ++G+ PD  TYN  ++GYC  G    A  +F  M  K  + TV +Y 
Sbjct: 372 RIEEAEDMIKEMREKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYT 431

Query: 338 ILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLY 397
            LI+ + K   + EA   +++ I  G+   +I +N L+ G    G    A +L  EM   
Sbjct: 432 SLIDVFGKRNRMSEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNA 491

Query: 398 NVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNA 457
            V PD  T+N L+ G C+   V+EA KL   ++    +     +N LI G  K G + +A
Sbjct: 492 KVVPDEVTFNTLMQGYCRERKVEEAKKLLDEMKERGIKPDHISYNTLISGYSKRGDMKDA 551

Query: 458 WELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHG 517
            E+F ++   G  PT++TY+ +I G  + G+ + A + L  M+  G  P+  T+  ++  
Sbjct: 552 LEVFDEMLSLGFDPTLLTYNALIQGYSKIGEADHAEELLREMQSKGITPDDSTYLYVIEA 611

Query: 518 FLQNN 522
              N+
Sbjct: 612 MKTND 616



 Score =  191 bits (486), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 125/464 (26%), Positives = 215/464 (46%), Gaps = 69/464 (14%)

Query: 59  ARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILIN 118
           A + +  M  M     I +FN++   + +   +     F   +   G+ P+ +T N +IN
Sbjct: 201 AWFVYEEMVKMNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVIN 260

Query: 119 --CFGNKERG--------------------------LCVENRIKEATWLFKNMIAFGVRP 150
             C   K                             LC E RI+EA+ +   ++  G+ P
Sbjct: 261 GYCLRGKFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVP 320

Query: 151 DVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVD 210
           + +TY  LI+G C  G+L  A     +M++     G+++  ++F+Y+++I +L  E  ++
Sbjct: 321 NAVTYNALIDGCCNKGDLDKAFAYRDEMMN----RGIVA--SVFTYNLLIHALFLEKRIE 374

Query: 211 KAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMI 270
           +A+++  EM+ +G+ P VV     I+G+C  GN ++   LF EM++   RP + T+  +I
Sbjct: 375 EAEDMIKEMREKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLI 434

Query: 271 DCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCK 330
           D   K  +++EA    +  I+ G+ PD   +N+L+DG+C+ G ID A ++   M +    
Sbjct: 435 DVFGKRNRMSEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVV 494

Query: 331 HTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKL 390
              V++N L+ GYC+   VEEA  L  ++   G++   I+YNTL+SG  + G    A ++
Sbjct: 495 PDEVTFNTLMQGYCRERKVEEAKKLLDEMKERGIKPDHISYNTLISGYSKRGDMKDALEV 554

Query: 391 FDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCK 450
           FDEM     +P L TYN                                    LI G  K
Sbjct: 555 FDEMLSLGFDPTLLTYN-----------------------------------ALIQGYSK 579

Query: 451 AGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKAND 494
            G  D+A EL  ++  KG+ P   TY  +I  +     L + +D
Sbjct: 580 IGEADHAEELLREMQSKGITPDDSTYLYVIEAMKTNDDLVENDD 623



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 105/383 (27%), Positives = 189/383 (49%), Gaps = 3/383 (0%)

Query: 185 NGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNW 244
           N L  KT +  + +++ + C+    D+A E    MK   I P    C +L+         
Sbjct: 140 NRLNVKTTLV-FDLLLSAYCQFRKPDEALECLNLMKENEIIPKTETCNSLLSLLLKLNKI 198

Query: 245 EEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSL 304
           +    ++ EM+ +  + +++TFN+MI+ LC+ GK  +A   +  M   G+ P+  TYN++
Sbjct: 199 KMAWFVYEEMVKMNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTV 258

Query: 305 MDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGV 364
           ++GYCL G+ + A +IF +M  K  K    +YN  I+  CK   +EEA  +  +++ +G+
Sbjct: 259 INGYCLRGKFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGL 318

Query: 365 RQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVK 424
               +TYN L+ G    G    A    DEM    +   + TYN+LI  L     ++EA  
Sbjct: 319 VPNAVTYNALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAED 378

Query: 425 LFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLC 484
           +   +     E  +  +N  I+G C+ G    A  LF ++ +K + PTV TY+ +I    
Sbjct: 379 MIKEMREKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFG 438

Query: 485 RKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPD 544
           ++ ++ +A +      K G  P+++ FN L+ G   N    +  +LL +M   +  +VPD
Sbjct: 439 KRNRMSEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAK--VVPD 496

Query: 545 DTTFSIVVDLLAKDEKYHECSAV 567
           + TF+ ++    ++ K  E   +
Sbjct: 497 EVTFNTLMQGYCRERKVEEAKKL 519



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 93/310 (30%), Positives = 161/310 (51%), Gaps = 2/310 (0%)

Query: 264 LTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLS 323
           L F++++   C+  K +EA   L LM +  + P   T NSL+     + +I  A  ++  
Sbjct: 148 LVFDLLLSAYCQFRKPDEALECLNLMKENEIIPKTETCNSLLSLLLKLNKIKMAWFVYEE 207

Query: 324 MHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQ 383
           M     K ++V++NI+IN  C+    ++A      +   GV+  V+TYNT+++G    G+
Sbjct: 208 MVKMNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGYCLRGK 267

Query: 384 AGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNC 443
              A K+F  MK  N++PD  TYN  I  LCK   ++EA  +   L  +        +N 
Sbjct: 268 FEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNAVTYNA 327

Query: 444 LIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNG 503
           LIDG C  G LD A+    ++  +G+V +V TY+++IH L  + ++E+A D +  M + G
Sbjct: 328 LIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEMREKG 387

Query: 504 CAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
             P+VVT+N  ++G+ +     K + L  +M   E+N+ P   T++ ++D+  K  +  E
Sbjct: 388 VEPDVVTYNIQINGYCRCGNAKKALSLFDEMV--EKNIRPTVETYTSLIDVFGKRNRMSE 445

Query: 564 CSAVSKSSYR 573
                K S +
Sbjct: 446 AEEKFKKSIK 455



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 82/280 (29%), Positives = 136/280 (48%), Gaps = 15/280 (5%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           C  G  +L++A  +   M +      + ++NLL  A+   +  +      +++   G+ P
Sbjct: 333 CNKG--DLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEMREKGVEP 390

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           D +T NI IN       G C     K+A  LF  M+   +RP V TY +LI+ F +   +
Sbjct: 391 DVVTYNIQIN-------GYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRM 443

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
           S A    KK +    + G++   +I  ++ +ID  C  G +D+A +L  EM    + P  
Sbjct: 444 SEAEEKFKKSI----KEGMLP--DIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVVPDE 497

Query: 229 VVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLEL 288
           V   TL+ G+C     EE   L  EM + G +P+ +++N +I    K G + +A  + + 
Sbjct: 498 VTFNTLMQGYCRERKVEEAKKLLDEMKERGIKPDHISYNTLISGYSKRGDMKDALEVFDE 557

Query: 289 MIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKG 328
           M+  G +P   TYN+L+ GY  +G  D A E+   M SKG
Sbjct: 558 MLSLGFDPTLLTYNALIQGYSKIGEADHAEELLREMQSKG 597



 Score = 89.4 bits (220), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 63/225 (28%), Positives = 97/225 (43%), Gaps = 15/225 (6%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           C+ G  N  +A   F  M      P + ++  L     K          ++K +  G+LP
Sbjct: 403 CRCG--NAKKALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRMSEAEEKFKKSIKEGMLP 460

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           D +  N LI+       G CV   I  A  L K M    V PD +T+ TL+ G+CR   +
Sbjct: 461 DIIMFNALID-------GHCVNGNIDRAFQLLKEMDNAKVVPDEVTFNTLMQGYCRERKV 513

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
             A    KK++    E G+  K +  SY+ +I    K G +  A E+F EM   G +P +
Sbjct: 514 EEA----KKLLDEMKERGI--KPDHISYNTLISGYSKRGDMKDALEVFDEMLSLGFDPTL 567

Query: 229 VVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCL 273
           +    LI G+   G  +    L  EM   G  P+  T+  +I+ +
Sbjct: 568 LTYNALIQGYSKIGEADHAEELLREMQSKGITPDDSTYLYVIEAM 612



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 63/252 (25%), Positives = 127/252 (50%), Gaps = 3/252 (1%)

Query: 319 EIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGL 378
           E+ L+ +    K T+V +++L++ YC+    +EA+     +  N +     T N+LLS L
Sbjct: 134 ELSLARNRLNVKTTLV-FDLLLSAYCQFRKPDEALECLNLMKENEIIPKTETCNSLLSLL 192

Query: 379 FQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGI 438
            +  +   A  +++EM   N++  + T+NI+I+ LC+    ++A      +E+   +  +
Sbjct: 193 LKLNKIKMAWFVYEEMVKMNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNV 252

Query: 439 EIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLY 498
             +N +I+G C  G+ + A ++F  +  K L P   TY+  I  LC++ ++E+A+  L  
Sbjct: 253 VTYNTVINGYCLRGKFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCK 312

Query: 499 MEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKD 558
           + ++G  PN VT+N L+ G        K      +M    R +V    T+++++  L  +
Sbjct: 313 LLESGLVPNAVTYNALIDGCCNKGDLDKAFAYRDEMM--NRGIVASVFTYNLLIHALFLE 370

Query: 559 EKYHECSAVSKS 570
           ++  E   + K 
Sbjct: 371 KRIEEAEDMIKE 382


>gi|326489757|dbj|BAK01859.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 746

 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 137/463 (29%), Positives = 224/463 (48%), Gaps = 61/463 (13%)

Query: 92  DAVISFYRKLVSIGLLPD--FLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVR 149
           D  I+ +R+L      PD    + NIL+       + L    R+K+A   F  M +    
Sbjct: 241 DEAIALFREL------PDKNVCSHNILL-------KALLSAGRLKDACQHFDEMSS---P 284

Query: 150 PDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLV 209
           PDV+TYGT+++G+C  G L  A++L  +M +   E      +N   Y+ +I  LC +G V
Sbjct: 285 PDVVTYGTMVHGYCVRGELENAVKLLDEMAAKGLE------SNATVYTSVIALLCNKGQV 338

Query: 210 DKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVM 269
             A  +  +M   G+    VV TT+I GFC                              
Sbjct: 339 SDALRVLEDMTMHGVALDAVVFTTVISGFC------------------------------ 368

Query: 270 IDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGC 329
                  G +  A  L E M +RGL  DR T+ +L++G C  G +  A  +   M  KG 
Sbjct: 369 -----SKGDLAAARRLFEEMQKRGLAADRVTHTALINGLCRAGELKEADRVLQEMVDKGL 423

Query: 330 KHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQK 389
              VV+Y +LI+GYCK  N+ EA  ++ +++   V   V+TY  L  GL + G    A +
Sbjct: 424 DVDVVTYTVLIDGYCKRGNMVEAFRVHNEMVGRRVAPNVVTYTALSDGLCKQGDVRAANE 483

Query: 390 LFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLC 449
           L  EM    +E ++ TYN LI+GLCK   +++A+++   +E       +  +  LID LC
Sbjct: 484 LLHEMCNKGLELNVYTYNSLINGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLIDTLC 543

Query: 450 KAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVV 509
           K+G  D A  +  ++  KG+ P++ TY+++++G C  G++E     L +M +    PNVV
Sbjct: 544 KSGEFDRAHNMLQEMLDKGIKPSIATYNVLMNGFCMSGRVEGGKKLLEWMLEKNVRPNVV 603

Query: 510 TFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVV 552
           T+N+LM  +  +       E+   M   E  + P++ T++I++
Sbjct: 604 TYNSLMKQYCIDKNMKSTTEIYKGMHSQE--VAPNENTYNILI 644



 Score =  208 bits (529), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 155/542 (28%), Positives = 254/542 (46%), Gaps = 40/542 (7%)

Query: 9   CLFSSETVSKVKLSSLFKSPRQIAAVSSPETQLNEFLHENCKSGIINLNEARYFFGYMTH 68
           CL S+E + +++   L  SP    AV S                 + L+EA   F  +  
Sbjct: 209 CLPSAELLRRLRQYGLSPSPESCNAVLS----------------RLPLDEAIALFREL-- 250

Query: 69  MQPSPPISSFNLLFGAV-AKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGL 127
             P   + S N+L  A+ +  R  DA   F      +   PD +T       +G    G 
Sbjct: 251 --PDKNVCSHNILLKALLSAGRLKDACQHFD----EMSSPPDVVT-------YGTMVHGY 297

Query: 128 CVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGL 187
           CV   ++ A  L   M A G+  +   Y ++I   C  G +S ALR+ + M      +G+
Sbjct: 298 CVRGELENAVKLLDEMAAKGLESNATVYTSVIALLCNKGQVSDALRVLEDMTM----HGV 353

Query: 188 ISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEV 247
                +F+   +I   C +G +  A+ LF EM+ RG+    V  T LI+G C AG  +E 
Sbjct: 354 ALDAVVFT--TVISGFCSKGDLAAARRLFEEMQKRGLAADRVTHTALINGLCRAGELKEA 411

Query: 248 NGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDG 307
           + +  EM+D G   +++T+ V+ID  CK G + EA  +   M+ R + P+  TY +L DG
Sbjct: 412 DRVLQEMVDKGLDVDVVTYTVLIDGYCKRGNMVEAFRVHNEMVGRRVAPNVVTYTALSDG 471

Query: 308 YCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQT 367
            C  G +  A E+   M +KG +  V +YN LING CK  N+E+AM +  ++ + G R  
Sbjct: 472 LCKQGDVRAANELLHEMCNKGLELNVYTYNSLINGLCKFGNLEQAMRIMTEMEAAGHRTD 531

Query: 368 VITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFH 427
           V TY TL+  L ++G+   A  +  EM    ++P ++TYN+L++G C +  V+   KL  
Sbjct: 532 VYTYTTLIDTLCKSGEFDRAHNMLQEMLDKGIKPSIATYNVLMNGFCMSGRVEGGKKLLE 591

Query: 428 -MLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRK 486
            MLE N     +  +N L+   C    + +  E++  +  + + P   TY+I+I G C+ 
Sbjct: 592 WMLEKN-VRPNVVTYNSLMKQYCIDKNMKSTTEIYKGMHSQEVAPNENTYNILIKGHCKA 650

Query: 487 GKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDT 546
             +++A  F   M + G      +++ L+    +  K S+      KM        PD  
Sbjct: 651 RNMKEALYFHQEMIEKGLRLTASSYSALIRLLNKKKKFSEARVFFDKMRNEGLTAEPDVY 710

Query: 547 TF 548
           +F
Sbjct: 711 SF 712



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 108/354 (30%), Positives = 177/354 (50%), Gaps = 48/354 (13%)

Query: 93  AVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDV 152
           A    + ++   GL  D +T   LIN       GLC    +KEA  + + M+  G+  DV
Sbjct: 375 AARRLFEEMQKRGLAADRVTHTALIN-------GLCRAGELKEADRVLQEMVDKGLDVDV 427

Query: 153 ITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKA 212
           +TY  LI+G+C+ GN+  A R+H +MV      G     N+ +Y+ + D LCK+G V  A
Sbjct: 428 VTYTVLIDGYCKRGNMVEAFRVHNEMV------GRRVAPNVVTYTALSDGLCKQGDVRAA 481

Query: 213 KELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDC 272
            EL  EM  +G+   V    +LI+G C  GN E+   +  EM   G R ++ T+  +ID 
Sbjct: 482 NELLHEMCNKGLELNVYTYNSLINGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLIDT 541

Query: 273 LCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAR-------------- 318
           LCK G+ + A+ +L+ M+ +G+ P   TYN LM+G+C+ GR++  +              
Sbjct: 542 LCKSGEFDRAHNMLQEMLDKGIKPSIATYNVLMNGFCMSGRVEGGKKLLEWMLEKNVRPN 601

Query: 319 ---------------------EIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYR 357
                                EI+  MHS+       +YNILI G+CK  N++EA+  ++
Sbjct: 602 VVTYNSLMKQYCIDKNMKSTTEIYKGMHSQEVAPNENTYNILIKGHCKARNMKEALYFHQ 661

Query: 358 QIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILID 411
           ++I  G+R T  +Y+ L+  L +  +   A+  FD+M+   +  +   Y+  +D
Sbjct: 662 EMIEKGLRLTASSYSALIRLLNKKKKFSEARVFFDKMRNEGLTAEPDVYSFYMD 715


>gi|125582652|gb|EAZ23583.1| hypothetical protein OsJ_07284 [Oryza sativa Japonica Group]
          Length = 667

 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 140/482 (29%), Positives = 226/482 (46%), Gaps = 34/482 (7%)

Query: 101 LVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLIN 160
           +V  G  PD  T N LI        G C  N++  A  LF  M   G   DV++Y TLI 
Sbjct: 1   MVRSGWRPDAYTFNSLI-------VGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIE 53

Query: 161 GFCRTGNLSVALRLHKKMVSGDY----------------ENGLI---------SKTNIFS 195
           G C  G +  A+ L  +M   D                 E GL+          + +  +
Sbjct: 54  GLCEAGRIDEAVELFGEMDQPDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRA 113

Query: 196 YSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEML 255
           Y+ ++D  C+E    +A+E+  EM  +G+ P VV CT +I+ +C  G   +   +   M 
Sbjct: 114 YAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMK 173

Query: 256 DLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRID 315
             G +PN+ T+N ++   C  GK+++A  LL  M   G+NPD  TYN L+ G C+ G I+
Sbjct: 174 LRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIE 233

Query: 316 TAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLL 375
           +A  +   M   G      +YN LIN  CK    ++A SL+  + + G++   +T+N+L+
Sbjct: 234 SAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLI 293

Query: 376 SGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFE 435
           +GL ++G+A  A K  ++M      PD  TY+  I+ LCK    QE +     +     +
Sbjct: 294 NGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVK 353

Query: 436 FGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDF 495
                +  +I  L K          + ++   G  P VVTY+  +   C +G+L +A + 
Sbjct: 354 PSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENV 413

Query: 496 LLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLL 555
           L+ M KNG   + + +NTLM G     +T   V +L +M       VP+  T+ I++  L
Sbjct: 414 LMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVAS--VPNQFTYFILLRHL 471

Query: 556 AK 557
            +
Sbjct: 472 VR 473



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 136/531 (25%), Positives = 238/531 (44%), Gaps = 40/531 (7%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           C++G I+  EA   FG M      P +  +  L   +      +  +   R++  +G  P
Sbjct: 56  CEAGRID--EAVELFGEMDQ----PDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRP 109

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
                  +++         C E + KEA  + + M   G+ P V+T   +IN +C+ G +
Sbjct: 110 STRAYAAVVDF-------RCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRM 162

Query: 169 SVALRLHKKM-VSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPA 227
           S ALR+ + M + G        K N+++Y+ ++   C EG V KA  L  +M+  G+NP 
Sbjct: 163 SDALRVLELMKLRG-------CKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPD 215

Query: 228 VVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLE 287
            V    LI G C  G+ E    L   M   G   +  T+N +I+ LCK G+ ++A  L +
Sbjct: 216 AVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFD 275

Query: 288 LMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKIL 347
            +  RG+ P+  T+NSL++G C  G+ D A +    M S GC     +Y+  I   CK+ 
Sbjct: 276 SLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMK 335

Query: 348 NVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYN 407
             +E +S   +++   V+ + + Y  ++  L +    G   + + EM      PD+ TY 
Sbjct: 336 GSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYT 395

Query: 408 ILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQK 467
             +   C    + EA  +   +  N        +N L+DG    G+ D+A  +  ++   
Sbjct: 396 TSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSV 455

Query: 468 GLVPTVVTYSIMIHGLCRK---------------GKLEKANDFLLY--MEKNGCAPNVVT 510
             VP   TY I++  L R                  +E  + F L+  M+KN   PN  T
Sbjct: 456 ASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGT 515

Query: 511 FNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKY 561
           +++++ GF ++ +T +   L+  M E   +L  D   ++ +V    K ++Y
Sbjct: 516 YSSILEGFSEDGRTEEATSLVSLMKEDSISLNED--IYTALVTCFCKSKRY 564



 Score =  191 bits (485), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 130/510 (25%), Positives = 234/510 (45%), Gaps = 73/510 (14%)

Query: 105 GLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCR 164
           G  P+  T N L+       +G C E ++ +A  L   M A GV PD +TY  LI G C 
Sbjct: 176 GCKPNVWTYNALV-------QGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCI 228

Query: 165 TGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGI 224
            G++  A RL + M  GD   GLI+  + ++Y+ +I++LCK+G  D+A  LF  ++ RGI
Sbjct: 229 DGHIESAFRLLRLM-EGD---GLIA--DQYTYNALINALCKDGRTDQACSLFDSLETRGI 282

Query: 225 NPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANG 284
            P  V   +LI+G C +G  +       +M+  G  P+  T++  I+ LCK     E   
Sbjct: 283 KPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLS 342

Query: 285 LLELMIQR-----------------------------------GLNPDRFTYNSLMDGYC 309
            +  M+Q+                                   G NPD  TY + M  YC
Sbjct: 343 FIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYC 402

Query: 310 LVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVI 369
           + GR++ A  + + M   G     ++YN L++G+  I   + A+S+ +Q+ S        
Sbjct: 403 IEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQF 462

Query: 370 TYNTLL-----------------SGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDG 412
           TY  LL                 +G+++A +      LFD MK     P+  TY+ +++G
Sbjct: 463 TYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEG 522

Query: 413 LCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPT 472
             ++   +EA  L  +++ +      +I+  L+   CK+ R  +AW L   + Q G +P 
Sbjct: 523 FSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPQ 582

Query: 473 VVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTS---KVVE 529
           +++Y  ++ GL  +G+ +KA +  +       +P+ + +  ++ G ++   +    +++ 
Sbjct: 583 LMSYQHLLSGLICEGQTDKAKEIFMNSRWKDYSPDEIVWKVIIDGLIKKGHSDISREMII 642

Query: 530 LLHKMAEPERNLVPDDTTFSIVVDLLAKDE 559
           +L +M     N  P   T++++ + L   E
Sbjct: 643 MLERM-----NCRPSHQTYAMLTEELPDRE 667


>gi|240254191|ref|NP_174467.4| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
 gi|357528959|sp|Q9C6S6.2|PPR67_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g31840
 gi|332193282|gb|AEE31403.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
          Length = 840

 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 126/449 (28%), Positives = 235/449 (52%), Gaps = 17/449 (3%)

Query: 98  YRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGT 157
           Y++++  G+ P+ +T  ILI       +GLC + RI EA  ++  ++  G+ P ++TY +
Sbjct: 379 YKRMLCQGISPNVVTYTILI-------KGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSS 431

Query: 158 LINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFL 217
           LI+GFC+ GNL     L++ M+   Y        ++  Y +++D L K+GL+  A    +
Sbjct: 432 LIDGFCKCGNLRSGFALYEDMIKMGYP------PDVVIYGVLVDGLSKQGLMLHAMRFSV 485

Query: 218 EMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGG 277
           +M G+ I   VVV  +LI G+C    ++E   +F  M   G +P++ TF  ++      G
Sbjct: 486 KMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEG 545

Query: 278 KINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYN 337
           ++ EA  L   M + GL PD   Y +L+D +C   +     ++F  M        +   N
Sbjct: 546 RLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCN 605

Query: 338 ILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLY 397
           ++I+   K   +E+A   +  +I   +   ++TYNT++ G     +   A+++F+ +K+ 
Sbjct: 606 VVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVT 665

Query: 398 NVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNA 457
              P+  T  ILI  LCKNN +  A+++F ++     +     + CL+D   K+  ++ +
Sbjct: 666 PFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGS 725

Query: 458 WELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHG 517
           ++LF ++ +KG+ P++V+YSI+I GLC++G++++A +           P+VV +  L+ G
Sbjct: 726 FKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRG 785

Query: 518 FLQNNKTSKVVELLHKMAEPERNLV-PDD 545
           + +  +  +   L   M    RN V PDD
Sbjct: 786 YCKVGRLVEAALLYEHML---RNGVKPDD 811



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 137/453 (30%), Positives = 222/453 (49%), Gaps = 15/453 (3%)

Query: 105 GLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCR 164
           G  P+ +T   LIN       G C    +  A  LFK M   G+ PD+I Y TLI+G+ +
Sbjct: 281 GPAPNVVTFCTLIN-------GFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFK 333

Query: 165 TGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGI 224
            G L +      K+ S     G+  K ++  +S  ID   K G +  A  ++  M  +GI
Sbjct: 334 AGMLGMG----HKLFSQALHKGV--KLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGI 387

Query: 225 NPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANG 284
           +P VV  T LI G C  G   E  G++ ++L  G  P+++T++ +ID  CK G +     
Sbjct: 388 SPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFA 447

Query: 285 LLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYC 344
           L E MI+ G  PD   Y  L+DG    G +  A    + M  +  +  VV +N LI+G+C
Sbjct: 448 LYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWC 507

Query: 345 KILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLS 404
           ++   +EA+ ++R +   G++  V T+ T++      G+   A  LF  M    +EPD  
Sbjct: 508 RLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDAL 567

Query: 405 TYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKL 464
            Y  LID  CK+      ++LF +++ NK    I + N +I  L K  R+++A + F+ L
Sbjct: 568 AYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNL 627

Query: 465 PQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKT 524
            +  + P +VTY+ MI G C   +L++A      ++     PN VT   L+H   +NN  
Sbjct: 628 IEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDM 687

Query: 525 SKVVELLHKMAEPERNLVPDDTTFSIVVDLLAK 557
              + +   MA  E+   P+  T+  ++D  +K
Sbjct: 688 DGAIRMFSIMA--EKGSKPNAVTYGCLMDWFSK 718



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 133/506 (26%), Positives = 248/506 (49%), Gaps = 15/506 (2%)

Query: 71  PSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVE 130
           P+P + +F  L     K    D     ++ +   G+ PD +  + LI+       G    
Sbjct: 282 PAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLID-------GYFKA 334

Query: 131 NRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISK 190
             +     LF   +  GV+ DV+ + + I+ + ++G+L+ A  ++K+M+      G+   
Sbjct: 335 GMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLC----QGI--S 388

Query: 191 TNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGL 250
            N+ +Y+I+I  LC++G + +A  ++ ++  RG+ P++V  ++LI GFC  GN      L
Sbjct: 389 PNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFAL 448

Query: 251 FIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCL 310
           + +M+ +G  P+++ + V++D L K G +  A      M+ + +  +   +NSL+DG+C 
Sbjct: 449 YEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCR 508

Query: 311 VGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVIT 370
           + R D A ++F  M   G K  V ++  ++        +EEA+ L+ ++   G+    + 
Sbjct: 509 LNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALA 568

Query: 371 YNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLE 430
           Y TL+    +  +     +LFD M+   +  D++  N++I  L K + +++A K F+ L 
Sbjct: 569 YCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLI 628

Query: 431 MNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLE 490
             K E  I  +N +I G C   RLD A  +F  L      P  VT +I+IH LC+   ++
Sbjct: 629 EGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMD 688

Query: 491 KANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSI 550
            A      M + G  PN VT+  LM  F ++       +L  +M   E+ + P   ++SI
Sbjct: 689 GAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQ--EKGISPSIVSYSI 746

Query: 551 VVDLLAKDEKYHECSAVSKSSYRACL 576
           ++D L K  +  E + +   +  A L
Sbjct: 747 IIDGLCKRGRVDEATNIFHQAIDAKL 772



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 113/417 (27%), Positives = 199/417 (47%), Gaps = 40/417 (9%)

Query: 185 NGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNW 244
            G I  + + ++  ++D+L  +G V KA +    +  RG    +V C  ++ G       
Sbjct: 209 RGGIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGLS-VDQI 267

Query: 245 EEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSL 304
           E  + L   +LD GP PN++TF  +I+  CK G+++ A  L ++M QRG+ PD   Y++L
Sbjct: 268 EVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTL 327

Query: 305 MDGYCLVG-----------------RID------------------TAREIFLSMHSKGC 329
           +DGY   G                 ++D                  TA  ++  M  +G 
Sbjct: 328 IDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGI 387

Query: 330 KHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQK 389
              VV+Y ILI G C+   + EA  +Y QI+  G+  +++TY++L+ G  + G       
Sbjct: 388 SPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFA 447

Query: 390 LFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLC 449
           L+++M      PD+  Y +L+DGL K   +  A++    +        + +FN LIDG C
Sbjct: 448 LYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWC 507

Query: 450 KAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVV 509
           +  R D A ++F  +   G+ P V T++ ++     +G+LE+A      M K G  P+ +
Sbjct: 508 RLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDAL 567

Query: 510 TFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTF-SIVVDLLAKDEKYHECS 565
            + TL+  F ++ K +  ++L   M   +RN +  D    ++V+ LL K  +  + S
Sbjct: 568 AYCTLIDAFCKHMKPTIGLQLFDLM---QRNKISADIAVCNVVIHLLFKCHRIEDAS 621



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 107/452 (23%), Positives = 212/452 (46%), Gaps = 45/452 (9%)

Query: 154 TYGTLINGFCRTGNLSVALRLHKKMVSGDYEN----GLISKTNIFSY--SIIIDSLCKEG 207
           ++ T+ +   R G   VA ++  +M++   ++    G I   ++ +     +++  C+ G
Sbjct: 101 SFYTIAHVLIRNGMFDVADKVFDEMITNRGKDFNVLGSIRDRSLDADVCKFLMECCCRYG 160

Query: 208 LVDKAKELFLEMKGRGI----NPAVVVCTTLI---------------------------H 236
           +VDKA E+F+     G+    +    +  +LI                           H
Sbjct: 161 MVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIGSDRVDLIADHFDKLCRGGIEPSGVSAH 220

Query: 237 GFC-----CAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQ 291
           GF      C G   +       +++ G R  +++ N ++  L    +I  A+ LL L++ 
Sbjct: 221 GFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGLSV-DQIEVASRLLSLVLD 279

Query: 292 RGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEE 351
            G  P+  T+ +L++G+C  G +D A ++F  M  +G +  +++Y+ LI+GY K   +  
Sbjct: 280 CGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGM 339

Query: 352 AMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILID 411
              L+ Q +  GV+  V+ +++ +    ++G    A  ++  M    + P++ TY ILI 
Sbjct: 340 GHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIK 399

Query: 412 GLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVP 471
           GLC++  + EA  ++  +     E  I  ++ LIDG CK G L + + L+  + + G  P
Sbjct: 400 GLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPP 459

Query: 472 TVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELL 531
            VV Y +++ GL ++G +  A  F + M       NVV FN+L+ G+ + N+  + +++ 
Sbjct: 460 DVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVF 519

Query: 532 HKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
             M      + PD  TF+ V+ +   + +  E
Sbjct: 520 RLMG--IYGIKPDVATFTTVMRVSIMEGRLEE 549



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 65/243 (26%), Positives = 118/243 (48%), Gaps = 13/243 (5%)

Query: 62  FFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFG 121
            F  M   + S  I+  N++   + K    +    F+  L+   + PD +T N +I C  
Sbjct: 588 LFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMI-C-- 644

Query: 122 NKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSG 181
               G C   R+ EA  +F+ +      P+ +T   LI+  C+  ++  A+R+   M   
Sbjct: 645 ----GYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMA-- 698

Query: 182 DYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCA 241
             E G  SK N  +Y  ++D   K   ++ + +LF EM+ +GI+P++V  + +I G C  
Sbjct: 699 --EKG--SKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKR 754

Query: 242 GNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTY 301
           G  +E   +F + +D    P+++ + ++I   CK G++ EA  L E M++ G+ PD    
Sbjct: 755 GRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDLLQ 814

Query: 302 NSL 304
            +L
Sbjct: 815 RAL 817


>gi|224128023|ref|XP_002329235.1| predicted protein [Populus trichocarpa]
 gi|222871016|gb|EEF08147.1| predicted protein [Populus trichocarpa]
          Length = 501

 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 146/450 (32%), Positives = 214/450 (47%), Gaps = 74/450 (16%)

Query: 55  NLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNR-HYDAVISFYRKLVSIGLLPDFLTL 113
           N+++A   F +M H +P P I  F  L  A+ K R +YDAVIS  R +   GL       
Sbjct: 64  NIDDALASFNHMLHRKPLPCIIQFTKLLSAIVKMRQYYDAVISLSRPMELAGL------- 116

Query: 114 NILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALR 173
                                               P+  T   LIN FC+  ++ +   
Sbjct: 117 -----------------------------------SPNTYTLNILINCFCKLQHVDLGFS 141

Query: 174 LHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTT 233
           +  K++       L  + ++  ++ +I+ LCK G   +A ELF E   RG N       +
Sbjct: 142 VLAKVIK------LGLQPDVVPFTTLINGLCKVGKFSQAVELFDETVERGYN-------S 188

Query: 234 LIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRG 293
           LIHG C    W+E + +  EM  L   P+++TFNV++D  CK GK++EA G+L+ M +  
Sbjct: 189 LIHGLCNCSQWKEASAILNEMTSLNIMPDIVTFNVLVDTFCKEGKVSEAQGVLKTMTEMS 248

Query: 294 LNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAM 353
           +  D  TYNSLM G+ L   +  AR++F  M +KGCK  V SYNILINGYCK   ++EA 
Sbjct: 249 VELDVVTYNSLMYGHSLWMEVVEARKLFGFMITKGCKPNVFSYNILINGYCKAEMIDEAK 308

Query: 354 SLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGL 413
            L+ ++I  G+   +++YNT   G  Q G+   AQ+L + M      PDL TY+IL+DG 
Sbjct: 309 QLFNEMIHQGLTPNIVSYNT--HGFCQLGKLREAQELNENMHTNGNLPDLCTYSILLDGF 366

Query: 414 CKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTV 473
           CK      A KLF  L               + GL +   LD A E F K+ + G  P  
Sbjct: 367 CKQGNHIAARKLFSEL--------------FVQGLQRL--LDEALETFRKMEEDGCPPNE 410

Query: 474 VTYSIMIHGLCRKGKLEKANDFLLYMEKNG 503
            +Y+++I G  R     +A   +  M   G
Sbjct: 411 WSYNVIIRGFLRHRDESRAVQLIGEMRDRG 440



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 107/366 (29%), Positives = 182/366 (49%), Gaps = 31/366 (8%)

Query: 210 DKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVM 269
           D    L   M+  G++P       LI+ FC   + +    +  +++ LG +P+++ F  +
Sbjct: 102 DAVISLSRPMELAGLSPNTYTLNILINCFCKLQHVDLGFSVLAKVIKLGLQPDVVPFTTL 161

Query: 270 IDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGC 329
           I+ LCK GK ++A  L +  ++RG       YNSL+ G C   +   A  I   M S   
Sbjct: 162 INGLCKVGKFSQAVELFDETVERG-------YNSLIHGLCNCSQWKEASAILNEMTSLNI 214

Query: 330 KHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQK 389
              +V++N+L++ +CK   V EA  + + +    V   V+TYN+L+ G     +   A+K
Sbjct: 215 MPDIVTFNVLVDTFCKEGKVSEAQGVLKTMTEMSVELDVVTYNSLMYGHSLWMEVVEARK 274

Query: 390 LFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLC 449
           LF  M     +P++ +YNILI+G CK   + EA +LF+ +        I  +N    G C
Sbjct: 275 LFGFMITKGCKPNVFSYNILINGYCKAEMIDEAKQLFNEMIHQGLTPNIVSYN--THGFC 332

Query: 450 KAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGK-------------------LE 490
           + G+L  A EL   +   G +P + TYSI++ G C++G                    L+
Sbjct: 333 QLGKLREAQELNENMHTNGNLPDLCTYSILLDGFCKQGNHIAARKLFSELFVQGLQRLLD 392

Query: 491 KANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSI 550
           +A +    ME++GC PN  ++N ++ GFL++   S+ V+L+ +M +  R    D    S+
Sbjct: 393 EALETFRKMEEDGCPPNEWSYNVIIRGFLRHRDESRAVQLIGEMRDRGRCRCGDH---SL 449

Query: 551 VVDLLA 556
           V DLL+
Sbjct: 450 VEDLLS 455



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 54/224 (24%), Positives = 98/224 (43%), Gaps = 45/224 (20%)

Query: 348 NVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQ-KLFDEMKLYNVEPDLSTY 406
           N+++A++ +  ++       +I +  LLS + +  Q   A   L   M+L  + P+  T 
Sbjct: 64  NIDDALASFNHMLHRKPLPCIIQFTKLLSAIVKMRQYYDAVISLSRPMELAGLSPNTYTL 123

Query: 407 NILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQ 466
           NILI                               NC     CK   +D  + +  K+ +
Sbjct: 124 NILI-------------------------------NCF----CKLQHVDLGFSVLAKVIK 148

Query: 467 KGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSK 526
            GL P VV ++ +I+GLC+ GK  +A +      + G       +N+L+HG    ++  +
Sbjct: 149 LGLQPDVVPFTTLINGLCKVGKFSQAVELFDETVERG-------YNSLIHGLCNCSQWKE 201

Query: 527 VVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKS 570
              +L++M     N++PD  TF+++VD   K+ K  E   V K+
Sbjct: 202 ASAILNEMTS--LNIMPDIVTFNVLVDTFCKEGKVSEAQGVLKT 243


>gi|225433790|ref|XP_002269080.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Vitis vinifera]
          Length = 1045

 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 145/497 (29%), Positives = 244/497 (49%), Gaps = 39/497 (7%)

Query: 91  YDAVISFYRKLVSIGLLPDFLTLNILI-NCFGNKERGLCVENRIKEATWLFKNMIAFGVR 149
           ++  + F  ++ S   +P+ +T  IL+  C   ++ G C          +   MI  G  
Sbjct: 315 FEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKR--------ILSMMITEGCY 366

Query: 150 PDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKE--- 206
           P    + +LI+ +CR+G+ S A +L KKM     + G +       Y+I+I  +C     
Sbjct: 367 PSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYV------VYNILIGGICGNEKL 420

Query: 207 ---GLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNL 263
               +++ A++ + EM    +    V  + L    C AG +E+   +  EM+  G  P+ 
Sbjct: 421 PSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDT 480

Query: 264 LTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLS 323
            T++ +I  LC   K++ A  L E M    + PD FTY  L+D +C VG +  AR+ F  
Sbjct: 481 STYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDE 540

Query: 324 MHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQ 383
           M   GC   VV+Y  LI+ Y K   +  A  L+  ++S G    V+TY  L+ G  ++GQ
Sbjct: 541 MVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQ 600

Query: 384 AGYAQKLFDEMK---------LY------NV-EPDLSTYNILIDGLCKNNCVQEAVKLFH 427
              A +++  M+         +Y      N+ +P++ TY  L+DGLCK + V+EA  L  
Sbjct: 601 IEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLD 660

Query: 428 MLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKG 487
           ++ +   E    +++ LIDG CK G+LD A  +F K+ ++G  P V TYS +I  L +  
Sbjct: 661 VMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDK 720

Query: 488 KLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTT 547
           +L+ A   L  M +N CAPNV+ +  ++ G  +  KT +   L+  M   E+   P+  T
Sbjct: 721 RLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMM--EEKGCHPNVVT 778

Query: 548 FSIVVDLLAKDEKYHEC 564
           ++ ++D   K  K  +C
Sbjct: 779 YTAMIDGFGKAGKVDKC 795



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 142/480 (29%), Positives = 222/480 (46%), Gaps = 23/480 (4%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
           P    FN L  A  ++  Y       +K+   G  P ++  NILI      E+ L   + 
Sbjct: 367 PSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEK-LPSLDV 425

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
           ++ A   +  M+   V  + +    L    C  G    A  + ++M+S     G I  T+
Sbjct: 426 LELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMS----KGFIPDTS 481

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
             +YS +I  LC    VD A  LF EMK   + P V   T LI  FC  G  ++    F 
Sbjct: 482 --TYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFD 539

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
           EM+  G  PN++T+  +I    K  K++ AN L E+M+  G  P+  TY +L+DG+C  G
Sbjct: 540 EMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSG 599

Query: 313 RIDTAREIFLSMHSKG----------------CKHTVVSYNILINGYCKILNVEEAMSLY 356
           +I+ A +I+  M                        + +Y  L++G CK   V+EA  L 
Sbjct: 600 QIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLL 659

Query: 357 RQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKN 416
             +   G     I Y+ L+ G  + G+   AQ +F +M      P++ TY+ LID L K+
Sbjct: 660 DVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKD 719

Query: 417 NCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTY 476
             +  A+K+   +  N     + I+  +IDGLCK G+ D A+ L   + +KG  P VVTY
Sbjct: 720 KRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTY 779

Query: 477 SIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAE 536
           + MI G  + GK++K  + +  M   GCAPN VT+  L++            +LL +M +
Sbjct: 780 TAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQ 839



 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 134/488 (27%), Positives = 230/488 (47%), Gaps = 21/488 (4%)

Query: 55  NLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLN 114
            ++ A   F  M      P + ++ +L  +  K         ++ ++V  G  P+ +T  
Sbjct: 495 KVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYT 554

Query: 115 ILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRL 174
            LI+ +    +       +  A  LF+ M++ G  P+V+TY  LI+G C++G +  A ++
Sbjct: 555 ALIHAYLKARK-------MSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQI 607

Query: 175 HKKMVSG----------DYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGI 224
           + +M               ++G I   NIF+Y  ++D LCK   V +A++L   M   G 
Sbjct: 608 YARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGC 667

Query: 225 NPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANG 284
            P  +V   LI GFC  G  +E   +F +M + G  PN+ T++ +ID L K  +++ A  
Sbjct: 668 EPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALK 727

Query: 285 LLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYC 344
           +L  M++    P+   Y  ++DG C VG+ D A  +   M  KGC   VV+Y  +I+G+ 
Sbjct: 728 VLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFG 787

Query: 345 KILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLS 404
           K   V++ + L RQ+ + G     +TY  L++    AG    A +L DEMK       ++
Sbjct: 788 KAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMA 847

Query: 405 TYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKL 464
            Y  +I+G  +   +  ++ L   +  N     I  +  LID  CKAGRL+ A EL  ++
Sbjct: 848 GYRKVIEGFNREFII--SLGLLDEIAENVAVPIIPAYRILIDSFCKAGRLELALELHKEM 905

Query: 465 PQKGLVPTVVT--YSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNN 522
                        YS +I  L    K++KA +    M K G  P +  F  L+ G ++ N
Sbjct: 906 SSCTSYSAADKDLYSSLIESLSLASKVDKAFELYADMIKRGGIPELSIFFYLVKGLIRIN 965

Query: 523 KTSKVVEL 530
           +  + ++L
Sbjct: 966 RWEEALQL 973



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 129/509 (25%), Positives = 207/509 (40%), Gaps = 107/509 (21%)

Query: 146 FGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSI--IIDSL 203
            G +P  +TY  L+  F     L  A  +H++M    +        N+  Y++   +  L
Sbjct: 226 LGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSDSGF--------NMDGYTLGCFVHLL 277

Query: 204 CKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNL 263
           CK G   + +E    ++        V+ T +I G C A  +EE       M      PN+
Sbjct: 278 CKAG---RWREALALIEKEEFKLDTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNV 334

Query: 264 LTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLS 323
           +T+ +++    +  ++     +L +MI  G  P R  +NSL+  YC  G    A ++   
Sbjct: 335 VTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKK 394

Query: 324 MHSKGCKHTVVSYNILINGYCK-------------------------ILN---------- 348
           M   GC+   V YNILI G C                          +LN          
Sbjct: 395 MGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARC 454

Query: 349 ------VEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPD 402
                  E+A S+ R+++S G      TY+ ++  L  A +   A  LF+EMK  +V PD
Sbjct: 455 LCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPD 514

Query: 403 LSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFH 462
           + TY ILID  CK   +Q+A K F  +  +     +  +  LI    KA ++ +A ELF 
Sbjct: 515 VFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFE 574

Query: 463 KLPQKGLVPTVVTYSIMIHGLCRKGKLEK------------------------------- 491
            +  +G +P VVTY+ +I G C+ G++EK                               
Sbjct: 575 MMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDP 634

Query: 492 --------------------ANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELL 531
                               A D L  M   GC PN + ++ L+ GF +  K  +   + 
Sbjct: 635 NIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVF 694

Query: 532 HKMAEPERNLVPDDTTFSIVVDLLAKDEK 560
            KM+  ER   P+  T+S ++D L KD++
Sbjct: 695 TKMS--ERGYGPNVYTYSSLIDRLFKDKR 721



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 106/398 (26%), Positives = 175/398 (43%), Gaps = 46/398 (11%)

Query: 197 SIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLD 256
           +++I   C+ GL + A E    +K  G  P+ +    L+  F  A   +    +  EM D
Sbjct: 201 NVLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSD 260

Query: 257 LGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDT 316
            G   +  T    +  LCK G+  EA  L+E   +     D   Y  ++ G C     + 
Sbjct: 261 SGFNMDGYTLGCFVHLLCKAGRWREALALIE---KEEFKLDTVIYTQMISGLCEASLFEE 317

Query: 317 AREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLS 376
           A +    M S  C   VV+Y IL+ G  +   +     +   +I+ G   +   +N+L+ 
Sbjct: 318 AMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIH 377

Query: 377 GLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKN------NCVQEAVKLF-HML 429
              ++G   YA KL  +M     +P    YNILI G+C N      + ++ A K +  ML
Sbjct: 378 AYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEML 437

Query: 430 EMN-------------------KFEFGIEI---------------FNCLIDGLCKAGRLD 455
           + +                   KFE    I               ++ +I  LC A ++D
Sbjct: 438 DAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVD 497

Query: 456 NAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLM 515
           NA+ LF ++    +VP V TY+I+I   C+ G L++A  +   M ++GCAPNVVT+  L+
Sbjct: 498 NAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALI 557

Query: 516 HGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
           H +L+  K S   EL   M       +P+  T++ ++D
Sbjct: 558 HAYLKARKMSSANELFEMML--SEGCIPNVVTYTALID 593


>gi|224069250|ref|XP_002302937.1| predicted protein [Populus trichocarpa]
 gi|222844663|gb|EEE82210.1| predicted protein [Populus trichocarpa]
          Length = 564

 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 125/378 (33%), Positives = 202/378 (53%), Gaps = 2/378 (0%)

Query: 190 KTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNG 249
           K +++S+ I+I   C+ G +DK+ +L   ++  G++P VV+ TTLI G C  G+ E    
Sbjct: 159 KFDVYSFGIMIKGCCENGNLDKSFQLLGLLQDMGLSPNVVIYTTLIDGCCKNGDIERARL 218

Query: 250 LFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYC 309
            F +M ++G   N  TF V+I+ L K G   +   L E M   GL P+ +TYN LM+ YC
Sbjct: 219 FFDKMGEMGLVANQYTFTVLINGLFKKGLKKDGFDLFEKMKINGLFPNLYTYNCLMNEYC 278

Query: 310 LVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVI 369
             G+I  A ++F  M  +G +  VV+YN LI G C+   V EA  L  Q+    V   +I
Sbjct: 279 GEGKICRAFDLFDEMRERGVEANVVTYNTLIGGMCREERVWEAEKLVDQMKKAAVSPNLI 338

Query: 370 TYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHML 429
           TYNTL+ G    G    A  L D++K   + P L TYNILI+G  K    +    L   +
Sbjct: 339 TYNTLIGGFCDVGNLDKASSLLDQLKSNGLSPSLVTYNILIEGYSKAGNWKGVADLAREM 398

Query: 430 EMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKL 489
           E             LID   +   ++ A++++  + + GLVP V  Y ++IHGLC KG +
Sbjct: 399 EGRGISPSKVTCTVLIDAYVRLQEMEKAFQIYSSMEKFGLVPDVYVYGVLIHGLCMKGNM 458

Query: 490 EKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFS 549
           ++++     M +    P+ V +NT++HG+ + + + + + LL +M    + LVP+  ++S
Sbjct: 459 KESSKLFRSMGEMHVEPSDVIYNTMIHGYCKEDNSYRALRLLREMEA--KGLVPNVASYS 516

Query: 550 IVVDLLAKDEKYHECSAV 567
            ++ +L KD K+ E   +
Sbjct: 517 SIIGVLCKDGKWEEAEVL 534



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 131/459 (28%), Positives = 229/459 (49%), Gaps = 14/459 (3%)

Query: 56  LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNI 115
           L++A  FF  M         + FN L G++ ++  ++    F+ +L           +  
Sbjct: 109 LDKALIFFNEMVDKGLVFRPNIFNSLLGSLVRSNCFEKAWLFFNELKE--------RVKF 160

Query: 116 LINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLH 175
            +  FG   +G C    + ++  L   +   G+ P+V+ Y TLI+G C+ G++  A    
Sbjct: 161 DVYSFGIMIKGCCENGNLDKSFQLLGLLQDMGLSPNVVIYTTLIDGCCKNGDIERARLFF 220

Query: 176 KKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLI 235
            KM     E GL++  N ++++++I+ L K+GL     +LF +MK  G+ P +     L+
Sbjct: 221 DKMG----EMGLVA--NQYTFTVLINGLFKKGLKKDGFDLFEKMKINGLFPNLYTYNCLM 274

Query: 236 HGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLN 295
           + +C  G       LF EM + G   N++T+N +I  +C+  ++ EA  L++ M +  ++
Sbjct: 275 NEYCGEGKICRAFDLFDEMRERGVEANVVTYNTLIGGMCREERVWEAEKLVDQMKKAAVS 334

Query: 296 PDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSL 355
           P+  TYN+L+ G+C VG +D A  +   + S G   ++V+YNILI GY K  N +    L
Sbjct: 335 PNLITYNTLIGGFCDVGNLDKASSLLDQLKSNGLSPSLVTYNILIEGYSKAGNWKGVADL 394

Query: 356 YRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCK 415
            R++   G+  + +T   L+    +  +   A +++  M+ + + PD+  Y +LI GLC 
Sbjct: 395 AREMEGRGISPSKVTCTVLIDAYVRLQEMEKAFQIYSSMEKFGLVPDVYVYGVLIHGLCM 454

Query: 416 NNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVT 475
              ++E+ KLF  +     E    I+N +I G CK      A  L  ++  KGLVP V +
Sbjct: 455 KGNMKESSKLFRSMGEMHVEPSDVIYNTMIHGYCKEDNSYRALRLLREMEAKGLVPNVAS 514

Query: 476 YSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTL 514
           YS +I  LC+ GK E+A   L  M +    P+    N +
Sbjct: 515 YSSIIGVLCKDGKWEEAEVLLDKMIELQLKPSASILNMI 553



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 138/483 (28%), Positives = 242/483 (50%), Gaps = 20/483 (4%)

Query: 81  LFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLF 140
           +  A  K++  D  + F+ ++V  GL+      NI  +  G+  R  C E       WLF
Sbjct: 99  IINAHLKSQLLDKALIFFNEMVDKGLV---FRPNIFNSLLGSLVRSNCFEK-----AWLF 150

Query: 141 KNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIII 200
            N +   V+ DV ++G +I G C  GNL  + +L   +     + GL    N+  Y+ +I
Sbjct: 151 FNELKERVKFDVYSFGIMIKGCCENGNLDKSFQLLGLL----QDMGL--SPNVVIYTTLI 204

Query: 201 DSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPR 260
           D  CK G +++A+  F +M   G+       T LI+G    G  ++   LF +M   G  
Sbjct: 205 DGCCKNGDIERARLFFDKMGEMGLVANQYTFTVLINGLFKKGLKKDGFDLFEKMKINGLF 264

Query: 261 PNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREI 320
           PNL T+N +++  C  GKI  A  L + M +RG+  +  TYN+L+ G C   R+  A ++
Sbjct: 265 PNLYTYNCLMNEYCGEGKICRAFDLFDEMRERGVEANVVTYNTLIGGMCREERVWEAEKL 324

Query: 321 FLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQ 380
              M        +++YN LI G+C + N+++A SL  Q+ SNG+  +++TYN L+ G  +
Sbjct: 325 VDQMKKAAVSPNLITYNTLIGGFCDVGNLDKASSLLDQLKSNGLSPSLVTYNILIEGYSK 384

Query: 381 AGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEI 440
           AG       L  EM+   + P   T  +LID   +   +++A +++  +E       + +
Sbjct: 385 AGNWKGVADLAREMEGRGISPSKVTCTVLIDAYVRLQEMEKAFQIYSSMEKFGLVPDVYV 444

Query: 441 FNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYME 500
           +  LI GLC  G +  + +LF  + +  + P+ V Y+ MIHG C++    +A   L  ME
Sbjct: 445 YGVLIHGLCMKGNMKESSKLFRSMGEMHVEPSDVIYNTMIHGYCKEDNSYRALRLLREME 504

Query: 501 KNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEK 560
             G  PNV ++++++    ++ K  +   LL KM E +  L P  +    ++++++K + 
Sbjct: 505 AKGLVPNVASYSSIIGVLCKDGKWEEAEVLLDKMIELQ--LKPSAS----ILNMISKAKN 558

Query: 561 YHE 563
           + E
Sbjct: 559 FTE 561



 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 111/385 (28%), Positives = 198/385 (51%), Gaps = 16/385 (4%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           C++G  NL+++    G +  M  SP +  +  L     KN   +    F+ K+  +GL+ 
Sbjct: 173 CENG--NLDKSFQLLGLLQDMGLSPNVVIYTTLIDGCCKNGDIERARLFFDKMGEMGLVA 230

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           +  T  +LIN       GL  +   K+   LF+ M   G+ P++ TY  L+N +C  G +
Sbjct: 231 NQYTFTVLIN-------GLFKKGLKKDGFDLFEKMKINGLFPNLYTYNCLMNEYCGEGKI 283

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
             A  L  +M     E G+  + N+ +Y+ +I  +C+E  V +A++L  +MK   ++P +
Sbjct: 284 CRAFDLFDEM----RERGV--EANVVTYNTLIGGMCREERVWEAEKLVDQMKKAAVSPNL 337

Query: 229 VVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLEL 288
           +   TLI GFC  GN ++ + L  ++   G  P+L+T+N++I+   K G       L   
Sbjct: 338 ITYNTLIGGFCDVGNLDKASSLLDQLKSNGLSPSLVTYNILIEGYSKAGNWKGVADLARE 397

Query: 289 MIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILN 348
           M  RG++P + T   L+D Y  +  ++ A +I+ SM   G    V  Y +LI+G C   N
Sbjct: 398 MEGRGISPSKVTCTVLIDAYVRLQEMEKAFQIYSSMEKFGLVPDVYVYGVLIHGLCMKGN 457

Query: 349 VEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNI 408
           ++E+  L+R +    V  + + YNT++ G  +   +  A +L  EM+   + P++++Y+ 
Sbjct: 458 MKESSKLFRSMGEMHVEPSDVIYNTMIHGYCKEDNSYRALRLLREMEAKGLVPNVASYSS 517

Query: 409 LIDGLCKNNCVQEA-VKLFHMLEMN 432
           +I  LCK+   +EA V L  M+E+ 
Sbjct: 518 IIGVLCKDGKWEEAEVLLDKMIELQ 542



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 63/245 (25%), Positives = 127/245 (51%), Gaps = 3/245 (1%)

Query: 332 TVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLF 391
           T + Y  +IN + K   +++A+  + +++  G+      +N+LL  L ++     A   F
Sbjct: 92  TALLYESIINAHLKSQLLDKALIFFNEMVDKGLVFRPNIFNSLLGSLVRSNCFEKAWLFF 151

Query: 392 DEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKA 451
           +E+K   V+ D+ ++ I+I G C+N  + ++ +L  +L+       + I+  LIDG CK 
Sbjct: 152 NELK-ERVKFDVYSFGIMIKGCCENGNLDKSFQLLGLLQDMGLSPNVVIYTTLIDGCCKN 210

Query: 452 GRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTF 511
           G ++ A   F K+ + GLV    T++++I+GL +KG  +   D    M+ NG  PN+ T+
Sbjct: 211 GDIERARLFFDKMGEMGLVANQYTFTVLINGLFKKGLKKDGFDLFEKMKINGLFPNLYTY 270

Query: 512 NTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKSS 571
           N LM+ +    K  +  +L  +M   ER +  +  T++ ++  + ++E+  E   +    
Sbjct: 271 NCLMNEYCGEGKICRAFDLFDEMR--ERGVEANVVTYNTLIGGMCREERVWEAEKLVDQM 328

Query: 572 YRACL 576
            +A +
Sbjct: 329 KKAAV 333



 Score = 83.2 bits (204), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 65/239 (27%), Positives = 103/239 (43%), Gaps = 22/239 (9%)

Query: 317 AREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLS 376
           A  +F S   +G +HT  S + L+        +  A SL  QI+SN +     T  +LL 
Sbjct: 21  ALSLFNSSIQQGFQHTHHSISFLLQHLLDHHKLPHAQSLILQILSNKISSPFFTVPSLLH 80

Query: 377 GLFQAGQAGYAQKL---------------------FDEMKLYNVEPDLSTYNILIDGLCK 415
            L Q         L                     F+EM    +    + +N L+  L +
Sbjct: 81  HLTQNQNPSMTTALLYESIINAHLKSQLLDKALIFFNEMVDKGLVFRPNIFNSLLGSLVR 140

Query: 416 NNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVT 475
           +NC ++A   F+ L+  + +F +  F  +I G C+ G LD +++L   L   GL P VV 
Sbjct: 141 SNCFEKAWLFFNELK-ERVKFDVYSFGIMIKGCCENGNLDKSFQLLGLLQDMGLSPNVVI 199

Query: 476 YSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKM 534
           Y+ +I G C+ G +E+A  F   M + G   N  TF  L++G  +        +L  KM
Sbjct: 200 YTTLIDGCCKNGDIERARLFFDKMGEMGLVANQYTFTVLINGLFKKGLKKDGFDLFEKM 258



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 63/241 (26%), Positives = 110/241 (45%), Gaps = 25/241 (10%)

Query: 338 ILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEM--- 394
           ILI    KI  ++ A+SL+   I  G + T  + + LL  L    +  +AQ L  ++   
Sbjct: 8   ILIQKMVKIPPLQ-ALSLFNSSIQQGFQHTHHSISFLLQHLLDHHKLPHAQSLILQILSN 66

Query: 395 ---------------KLYNVEPDLST---YNILIDGLCKNNCVQEAVKLFHMLEMNKFEF 436
                             N  P ++T   Y  +I+   K+  + +A+  F+ +      F
Sbjct: 67  KISSPFFTVPSLLHHLTQNQNPSMTTALLYESIINAHLKSQLLDKALIFFNEMVDKGLVF 126

Query: 437 GIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFL 496
              IFN L+  L ++   + AW  F++L ++ +   V ++ IMI G C  G L+K+   L
Sbjct: 127 RPNIFNSLLGSLVRSNCFEKAWLFFNELKER-VKFDVYSFGIMIKGCCENGNLDKSFQLL 185

Query: 497 LYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLA 556
             ++  G +PNVV + TL+ G  +N    +      KM   E  LV +  TF+++++ L 
Sbjct: 186 GLLQDMGLSPNVVIYTTLIDGCCKNGDIERARLFFDKMG--EMGLVANQYTFTVLINGLF 243

Query: 557 K 557
           K
Sbjct: 244 K 244


>gi|147833287|emb|CAN77475.1| hypothetical protein VITISV_041111 [Vitis vinifera]
          Length = 1010

 Score =  216 bits (551), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 145/497 (29%), Positives = 244/497 (49%), Gaps = 39/497 (7%)

Query: 91  YDAVISFYRKLVSIGLLPDFLTLNILI-NCFGNKERGLCVENRIKEATWLFKNMIAFGVR 149
           ++  + F  ++ S   +P+ +T  IL+  C   ++ G C          +   MI  G  
Sbjct: 315 FEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKR--------ILSMMITEGCY 366

Query: 150 PDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKE--- 206
           P    + +LI+ +CR+G+ S A +L KKM     + G +       Y+I+I  +C     
Sbjct: 367 PSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYV------VYNILIGGICGNEKL 420

Query: 207 ---GLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNL 263
               +++ A++ + EM    +    V  + L    C AG +E+   +  EM+  G  P+ 
Sbjct: 421 PSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDT 480

Query: 264 LTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLS 323
            T++ +I  LC   K++ A  L E M    + PD FTY  L+D +C VG +  AR+ F  
Sbjct: 481 STYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDE 540

Query: 324 MHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQ 383
           M   GC   VV+Y  LI+ Y K   +  A  L+  ++S G    V+TY  L+ G  ++GQ
Sbjct: 541 MVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQ 600

Query: 384 AGYAQKLFDEMK---------LY------NV-EPDLSTYNILIDGLCKNNCVQEAVKLFH 427
              A +++  M+         +Y      N+ +P++ TY  L+DGLCK + V+EA  L  
Sbjct: 601 IEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLD 660

Query: 428 MLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKG 487
           ++ +   E    +++ LIDG CK G+LD A  +F K+ ++G  P V TYS +I  L +  
Sbjct: 661 VMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDK 720

Query: 488 KLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTT 547
           +L+ A   L  M +N CAPNV+ +  ++ G  +  KT +   L+  M   E+   P+  T
Sbjct: 721 RLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMM--EEKGCHPNVVT 778

Query: 548 FSIVVDLLAKDEKYHEC 564
           ++ ++D   K  K  +C
Sbjct: 779 YTAMIDGFGKAGKVDKC 795



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 142/480 (29%), Positives = 222/480 (46%), Gaps = 23/480 (4%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
           P    FN L  A  ++  Y       +K+   G  P ++  NILI      E+ L   + 
Sbjct: 367 PSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEK-LPSLDV 425

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
           ++ A   +  M+   V  + +    L    C  G    A  + ++M+S     G I  T+
Sbjct: 426 LELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMS----KGFIPDTS 481

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
             +YS +I  LC    VD A  LF EMK   + P V   T LI  FC  G  ++    F 
Sbjct: 482 --TYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFD 539

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
           EM+  G  PN++T+  +I    K  K++ AN L E+M+  G  P+  TY +L+DG+C  G
Sbjct: 540 EMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSG 599

Query: 313 RIDTAREIFLSMHSKG----------------CKHTVVSYNILINGYCKILNVEEAMSLY 356
           +I+ A +I+  M                        + +Y  L++G CK   V+EA  L 
Sbjct: 600 QIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLL 659

Query: 357 RQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKN 416
             +   G     I Y+ L+ G  + G+   AQ +F +M      P++ TY+ LID L K+
Sbjct: 660 DVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKD 719

Query: 417 NCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTY 476
             +  A+K+   +  N     + I+  +IDGLCK G+ D A+ L   + +KG  P VVTY
Sbjct: 720 KRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTY 779

Query: 477 SIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAE 536
           + MI G  + GK++K  + +  M   GCAPN VT+  L++            +LL +M +
Sbjct: 780 TAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQ 839



 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 136/483 (28%), Positives = 228/483 (47%), Gaps = 23/483 (4%)

Query: 55  NLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLN 114
            ++ A   F  M      P + ++ +L  +  K         ++ ++V  G  P+ +T  
Sbjct: 495 KVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYT 554

Query: 115 ILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRL 174
            LI+ +    +       +  A  LF+ M++ G  P+V+TY  LI+G C++G +  A ++
Sbjct: 555 ALIHAYLKARK-------MSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQI 607

Query: 175 HKKMVSG----------DYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGI 224
           + +M               ++G I   NIF+Y  ++D LCK   V +A++L   M   G 
Sbjct: 608 YARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGC 667

Query: 225 NPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANG 284
            P  +V   LI GFC  G  +E   +F +M + G  PN+ T++ +ID L K  +++ A  
Sbjct: 668 EPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALK 727

Query: 285 LLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYC 344
           +L  M++    P+   Y  ++DG C VG+ D A  +   M  KGC   VV+Y  +I+G+ 
Sbjct: 728 VLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFG 787

Query: 345 KILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLS 404
           K   V++ + L RQ+ + G     +TY  L++    AG    A +L DEMK       ++
Sbjct: 788 KAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMA 847

Query: 405 TYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKL 464
            Y  +I+G  +   +  ++ L   +  N     I  +  LID  CKAGRL+ A EL HK 
Sbjct: 848 GYRKVIEGFNREFII--SLGLLDEIAENVAVPIIPAYRILIDSFCKAGRLELALEL-HKX 904

Query: 465 PQKGLVPTVVT---YSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQN 521
                  +      YS +I  L    K++KA +    M K G  P +  F  L+ G ++ 
Sbjct: 905 MSSCTSYSAADKDLYSSLIESLSLASKVDKAFELYADMIKRGGIPELSIFFYLVKGLIRI 964

Query: 522 NKT 524
           N+T
Sbjct: 965 NRT 967



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 129/509 (25%), Positives = 207/509 (40%), Gaps = 107/509 (21%)

Query: 146 FGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSI--IIDSL 203
            G +P  +TY  L+  F     L  A  +H++M    +        N+  Y++   +  L
Sbjct: 226 LGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSDSGF--------NMDGYTLGCFVHLL 277

Query: 204 CKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNL 263
           CK G   + +E    ++        V+ T +I G C A  +EE       M      PN+
Sbjct: 278 CKAG---RWREALALIEKEEFKLDTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNV 334

Query: 264 LTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLS 323
           +T+ +++    +  ++     +L +MI  G  P R  +NSL+  YC  G    A ++   
Sbjct: 335 VTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKK 394

Query: 324 MHSKGCKHTVVSYNILINGYCK-------------------------ILN---------- 348
           M   GC+   V YNILI G C                          +LN          
Sbjct: 395 MGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARC 454

Query: 349 ------VEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPD 402
                  E+A S+ R+++S G      TY+ ++  L  A +   A  LF+EMK  +V PD
Sbjct: 455 LCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPD 514

Query: 403 LSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFH 462
           + TY ILID  CK   +Q+A K F  +  +     +  +  LI    KA ++ +A ELF 
Sbjct: 515 VFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFE 574

Query: 463 KLPQKGLVPTVVTYSIMIHGLCRKGKLEK------------------------------- 491
            +  +G +P VVTY+ +I G C+ G++EK                               
Sbjct: 575 MMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDP 634

Query: 492 --------------------ANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELL 531
                               A D L  M   GC PN + ++ L+ GF +  K  +   + 
Sbjct: 635 NIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVF 694

Query: 532 HKMAEPERNLVPDDTTFSIVVDLLAKDEK 560
            KM+  ER   P+  T+S ++D L KD++
Sbjct: 695 TKMS--ERGYGPNVYTYSSLIDRLFKDKR 721



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 106/398 (26%), Positives = 175/398 (43%), Gaps = 46/398 (11%)

Query: 197 SIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLD 256
           +++I   C+ GL + A E    +K  G  P+ +    L+  F  A   +    +  EM D
Sbjct: 201 NVLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSD 260

Query: 257 LGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDT 316
            G   +  T    +  LCK G+  EA  L+E   +     D   Y  ++ G C     + 
Sbjct: 261 SGFNMDGYTLGCFVHLLCKAGRWREALALIE---KEEFKLDTVIYTQMISGLCEASLFEE 317

Query: 317 AREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLS 376
           A +    M S  C   VV+Y IL+ G  +   +     +   +I+ G   +   +N+L+ 
Sbjct: 318 AMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIH 377

Query: 377 GLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKN------NCVQEAVKLF-HML 429
              ++G   YA KL  +M     +P    YNILI G+C N      + ++ A K +  ML
Sbjct: 378 AYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEML 437

Query: 430 EMN-------------------KFEFGIEI---------------FNCLIDGLCKAGRLD 455
           + +                   KFE    I               ++ +I  LC A ++D
Sbjct: 438 DAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVD 497

Query: 456 NAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLM 515
           NA+ LF ++    +VP V TY+I+I   C+ G L++A  +   M ++GCAPNVVT+  L+
Sbjct: 498 NAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALI 557

Query: 516 HGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
           H +L+  K S   EL   M       +P+  T++ ++D
Sbjct: 558 HAYLKARKMSSANELFEMML--SEGCIPNVVTYTALID 593


>gi|449475988|ref|XP_004154607.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g79540-like [Cucumis sativus]
          Length = 950

 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 142/510 (27%), Positives = 251/510 (49%), Gaps = 28/510 (5%)

Query: 63  FGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGN 122
           F  M      P + +FNL+   + +   +   ++ Y +++   L PD +T  ILI+    
Sbjct: 151 FSLMRDFDCKPDLFAFNLILHFLVRKEAFLLALAVYNQMLKCNLNPDVVTYGILIH---- 206

Query: 123 KERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGD 182
              GLC   + ++A  LF  M   G+ P+ I Y  +++G C+   +  A RL  KM +  
Sbjct: 207 ---GLCKTCKTQDALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASG 263

Query: 183 YENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAG 242
               LI+      Y+++++  CK G +D A  L   +   G    V+    LI+G   A 
Sbjct: 264 CNRDLIT------YNVLLNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRAR 317

Query: 243 NWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYN 302
            +EE +  + +ML    +P+++ + +MI  L + G++ EA  LL  M +RGL PD   YN
Sbjct: 318 RYEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYN 377

Query: 303 SLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISN 362
           +L+ G+C +G +D A  + L +    C     +Y+ILI G CK   + +A  +++++   
Sbjct: 378 ALIKGFCDMGYLDEAESLRLEISKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKL 437

Query: 363 GVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEP-------------DLSTYNIL 409
           G   +V+T+N+L++GL +A +   A+ LF +M++                  D+++  ++
Sbjct: 438 GCLPSVVTFNSLINGLCKANRLEEARLLFYQMEIVRKPSLFLRLSQGTDKVFDIASLQVM 497

Query: 410 IDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGL 469
           ++ LC++  + +A KL   L  +     I  +N LI+G CK G ++ A++LF ++  KG 
Sbjct: 498 MERLCESGMILKAYKLLMQLVDSGVLPDIRTYNILINGFCKFGNINGAFKLFKEMQLKGH 557

Query: 470 VPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVE 529
           +P  VTY  +I GL R G+ E A +    M K GC P   T+ T+M    + N  S  + 
Sbjct: 558 MPDSVTYGTLIDGLYRAGRNEDALEIFEQMVKKGCVPESSTYKTIMTWSCRENNISLALS 617

Query: 530 LLHKMAEPERNLVPDDTTFSIVVDLLAKDE 559
           +  K     R    +D    +V +    +E
Sbjct: 618 VWMKYLRDFRGW--EDEKVRVVAESFDNEE 645



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 122/437 (27%), Positives = 213/437 (48%), Gaps = 21/437 (4%)

Query: 134 KEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNI 193
           ++A   F  M  F  +PD+  +  +++   R     +AL ++ +M+  +         ++
Sbjct: 145 EKAVESFSLMRDFDCKPDLFAFNLILHFLVRKEAFLLALAVYNQMLKCNL------NPDV 198

Query: 194 FSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIE 253
            +Y I+I  LCK      A  LF EM  RGI P  ++ + ++ G C A    +   LF +
Sbjct: 199 VTYGILIHGLCKTCKTQDALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDAQRLFSK 258

Query: 254 MLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGR 313
           M   G   +L+T+NV+++  CK G +++A  LL+L+ + G       Y  L++G     R
Sbjct: 259 MRASGCNRDLITYNVLLNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARR 318

Query: 314 IDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNT 373
            + A   +  M  +  K  V+ Y I+I G  +   V EA++L  ++   G+R   I YN 
Sbjct: 319 YEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNA 378

Query: 374 LLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNK 433
           L+ G    G    A+ L  E+  ++  P+  TY+ILI G+CKN  + +A  +F  +E   
Sbjct: 379 LIKGFCDMGYLDEAESLRLEISKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKLG 438

Query: 434 FEFGIEIFNCLIDGLCKAGRLDNAWELFHKL-----PQKGL--------VPTVVTYSIMI 480
               +  FN LI+GLCKA RL+ A  LF+++     P   L        V  + +  +M+
Sbjct: 439 CLPSVVTFNSLINGLCKANRLEEARLLFYQMEIVRKPSLFLRLSQGTDKVFDIASLQVMM 498

Query: 481 HGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERN 540
             LC  G + KA   L+ +  +G  P++ T+N L++GF +    +   +L  +M    + 
Sbjct: 499 ERLCESGMILKAYKLLMQLVDSGVLPDIRTYNILINGFCKFGNINGAFKLFKEMQ--LKG 556

Query: 541 LVPDDTTFSIVVDLLAK 557
            +PD  T+  ++D L +
Sbjct: 557 HMPDSVTYGTLIDGLYR 573



 Score =  165 bits (417), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 157/576 (27%), Positives = 246/576 (42%), Gaps = 99/576 (17%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
           N  L+  CKSG   L++A      +T       +  +  L   + + R Y+    +Y+K+
Sbjct: 272 NVLLNGFCKSGY--LDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKM 329

Query: 102 VSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLING 161
           +   + PD +   I+I       RGL  E R+ EA  L   M   G+RPD I Y  LI G
Sbjct: 330 LRENIKPDVMLYTIMI-------RGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKG 382

Query: 162 FCRTGNLSVA--LRLHKKMVSGDYENGLISKTNIF----SYSIIIDSLCKEGLVDKAKEL 215
           FC  G L  A  LRL             ISK + F    +YSI+I  +CK GL++KA+ +
Sbjct: 383 FCDMGYLDEAESLRLE------------ISKHDCFPNNHTYSILICGMCKNGLINKAQHI 430

Query: 216 FLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEM--------------------- 254
           F EM+  G  P+VV   +LI+G C A   EE   LF +M                     
Sbjct: 431 FKEMEKLGCLPSVVTFNSLINGLCKANRLEEARLLFYQMEIVRKPSLFLRLSQGTDKVFD 490

Query: 255 ---------------------------LDLGPRPNLLTFNVMIDCLCKGGKINEANGLLE 287
                                      +D G  P++ T+N++I+  CK G IN A  L +
Sbjct: 491 IASLQVMMERLCESGMILKAYKLLMQLVDSGVLPDIRTYNILINGFCKFGNINGAFKLFK 550

Query: 288 LMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKIL 347
            M  +G  PD  TY +L+DG    GR + A EIF  M  KGC     +Y  ++   C+  
Sbjct: 551 EMQLKGHMPDSVTYGTLIDGLYRAGRNEDALEIFEQMVKKGCVPESSTYKTIMTWSCREN 610

Query: 348 NVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYN 407
           N+  A+S++ + + +  R        +++  F   +   A +   EM + +   DL+ Y 
Sbjct: 611 NISLALSVWMKYLRD-FRGWEDEKVRVVAESFDNEELQTAIRRLLEMDIKSKNFDLAPYT 669

Query: 408 ILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNC--LIDGLCKAGRLDNAWELFHKLP 465
           I + GL +     EA  +F +L+   F+  I   +C  LI  LC    LD A ++F    
Sbjct: 670 IFLIGLVQAKRDCEAFAIFSVLK--DFKMNISSASCVMLIGRLCMVENLDMAMDVFLFTL 727

Query: 466 QKG--LVPTVVTYSIMIHGLCRKGKLEKANDFLLY---MEKNGCA---------PNVVTF 511
           ++G  L+P +         LC    L++ +D L     ME +G            ++ T 
Sbjct: 728 ERGFRLMPPICN-----QLLCNLLHLDRKDDALFLANRMEASGTELCIFIGANCKDIPTN 782

Query: 512 NTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTT 547
            + +   L   +  ++V +   + +P R L P   T
Sbjct: 783 ESDLPMQLHRLQMQELVSITEDLLDPARTLSPSIPT 818


>gi|297745184|emb|CBI39176.3| unnamed protein product [Vitis vinifera]
          Length = 996

 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 145/497 (29%), Positives = 244/497 (49%), Gaps = 39/497 (7%)

Query: 91  YDAVISFYRKLVSIGLLPDFLTLNILI-NCFGNKERGLCVENRIKEATWLFKNMIAFGVR 149
           ++  + F  ++ S   +P+ +T  IL+  C   ++ G C          +   MI  G  
Sbjct: 315 FEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKR--------ILSMMITEGCY 366

Query: 150 PDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKE--- 206
           P    + +LI+ +CR+G+ S A +L KKM     + G +       Y+I+I  +C     
Sbjct: 367 PSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYV------VYNILIGGICGNEKL 420

Query: 207 ---GLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNL 263
               +++ A++ + EM    +    V  + L    C AG +E+   +  EM+  G  P+ 
Sbjct: 421 PSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDT 480

Query: 264 LTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLS 323
            T++ +I  LC   K++ A  L E M    + PD FTY  L+D +C VG +  AR+ F  
Sbjct: 481 STYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDE 540

Query: 324 MHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQ 383
           M   GC   VV+Y  LI+ Y K   +  A  L+  ++S G    V+TY  L+ G  ++GQ
Sbjct: 541 MVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQ 600

Query: 384 AGYAQKLFDEMK---------LY------NV-EPDLSTYNILIDGLCKNNCVQEAVKLFH 427
              A +++  M+         +Y      N+ +P++ TY  L+DGLCK + V+EA  L  
Sbjct: 601 IEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLD 660

Query: 428 MLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKG 487
           ++ +   E    +++ LIDG CK G+LD A  +F K+ ++G  P V TYS +I  L +  
Sbjct: 661 VMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDK 720

Query: 488 KLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTT 547
           +L+ A   L  M +N CAPNV+ +  ++ G  +  KT +   L+  M   E+   P+  T
Sbjct: 721 RLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMM--EEKGCHPNVVT 778

Query: 548 FSIVVDLLAKDEKYHEC 564
           ++ ++D   K  K  +C
Sbjct: 779 YTAMIDGFGKAGKVDKC 795



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 142/480 (29%), Positives = 222/480 (46%), Gaps = 23/480 (4%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
           P    FN L  A  ++  Y       +K+   G  P ++  NILI      E+ L   + 
Sbjct: 367 PSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEK-LPSLDV 425

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
           ++ A   +  M+   V  + +    L    C  G    A  + ++M+S     G I  T+
Sbjct: 426 LELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMS----KGFIPDTS 481

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
             +YS +I  LC    VD A  LF EMK   + P V   T LI  FC  G  ++    F 
Sbjct: 482 --TYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFD 539

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
           EM+  G  PN++T+  +I    K  K++ AN L E+M+  G  P+  TY +L+DG+C  G
Sbjct: 540 EMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSG 599

Query: 313 RIDTAREIFLSMHSKG----------------CKHTVVSYNILINGYCKILNVEEAMSLY 356
           +I+ A +I+  M                        + +Y  L++G CK   V+EA  L 
Sbjct: 600 QIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLL 659

Query: 357 RQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKN 416
             +   G     I Y+ L+ G  + G+   AQ +F +M      P++ TY+ LID L K+
Sbjct: 660 DVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKD 719

Query: 417 NCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTY 476
             +  A+K+   +  N     + I+  +IDGLCK G+ D A+ L   + +KG  P VVTY
Sbjct: 720 KRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTY 779

Query: 477 SIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAE 536
           + MI G  + GK++K  + +  M   GCAPN VT+  L++            +LL +M +
Sbjct: 780 TAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQ 839



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 134/488 (27%), Positives = 230/488 (47%), Gaps = 21/488 (4%)

Query: 55  NLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLN 114
            ++ A   F  M      P + ++ +L  +  K         ++ ++V  G  P+ +T  
Sbjct: 495 KVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYT 554

Query: 115 ILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRL 174
            LI+ +    +       +  A  LF+ M++ G  P+V+TY  LI+G C++G +  A ++
Sbjct: 555 ALIHAYLKARK-------MSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQI 607

Query: 175 HKKMVSG----------DYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGI 224
           + +M               ++G I   NIF+Y  ++D LCK   V +A++L   M   G 
Sbjct: 608 YARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGC 667

Query: 225 NPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANG 284
            P  +V   LI GFC  G  +E   +F +M + G  PN+ T++ +ID L K  +++ A  
Sbjct: 668 EPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALK 727

Query: 285 LLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYC 344
           +L  M++    P+   Y  ++DG C VG+ D A  +   M  KGC   VV+Y  +I+G+ 
Sbjct: 728 VLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFG 787

Query: 345 KILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLS 404
           K   V++ + L RQ+ + G     +TY  L++    AG    A +L DEMK       ++
Sbjct: 788 KAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMA 847

Query: 405 TYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKL 464
            Y  +I+G  +   +  ++ L   +  N     I  +  LID  CKAGRL+ A EL  ++
Sbjct: 848 GYRKVIEGFNREFII--SLGLLDEIAENVAVPIIPAYRILIDSFCKAGRLELALELHKEM 905

Query: 465 PQKGLVPTVVT--YSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNN 522
                        YS +I  L    K++KA +    M K G  P +  F  L+ G ++ N
Sbjct: 906 SSCTSYSAADKDLYSSLIESLSLASKVDKAFELYADMIKRGGIPELSIFFYLVKGLIRIN 965

Query: 523 KTSKVVEL 530
           +  + ++L
Sbjct: 966 RWEEALQL 973



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 127/507 (25%), Positives = 205/507 (40%), Gaps = 103/507 (20%)

Query: 146 FGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCK 205
            G +P  +TY  L+  F     L  A  +H++M    +        + ++    +  LCK
Sbjct: 226 LGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSDSGF------NMDGYTLGCFVHLLCK 279

Query: 206 EGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLT 265
            G   + +E    ++        V+ T +I G C A  +EE       M      PN++T
Sbjct: 280 AG---RWREALALIEKEEFKLDTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVT 336

Query: 266 FNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMH 325
           + +++    +  ++     +L +MI  G  P R  +NSL+  YC  G    A ++   M 
Sbjct: 337 YRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMG 396

Query: 326 SKGCKHTVVSYNILINGYCK-------------------------ILN------------ 348
             GC+   V YNILI G C                          +LN            
Sbjct: 397 DCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLC 456

Query: 349 ----VEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLS 404
                E+A S+ R+++S G      TY+ ++  L  A +   A  LF+EMK  +V PD+ 
Sbjct: 457 GAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVF 516

Query: 405 TYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKL 464
           TY ILID  CK   +Q+A K F  +  +     +  +  LI    KA ++ +A ELF  +
Sbjct: 517 TYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMM 576

Query: 465 PQKGLVPTVVTYSIMIHGLCRKGKLEK--------------------------------- 491
             +G +P VVTY+ +I G C+ G++EK                                 
Sbjct: 577 LSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNI 636

Query: 492 ------------------ANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHK 533
                             A D L  M   GC PN + ++ L+ GF +  K  +   +  K
Sbjct: 637 FTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTK 696

Query: 534 MAEPERNLVPDDTTFSIVVDLLAKDEK 560
           M+  ER   P+  T+S ++D L KD++
Sbjct: 697 MS--ERGYGPNVYTYSSLIDRLFKDKR 721



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 106/398 (26%), Positives = 175/398 (43%), Gaps = 46/398 (11%)

Query: 197 SIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLD 256
           +++I   C+ GL + A E    +K  G  P+ +    L+  F  A   +    +  EM D
Sbjct: 201 NVLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSD 260

Query: 257 LGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDT 316
            G   +  T    +  LCK G+  EA  L+E   +     D   Y  ++ G C     + 
Sbjct: 261 SGFNMDGYTLGCFVHLLCKAGRWREALALIE---KEEFKLDTVIYTQMISGLCEASLFEE 317

Query: 317 AREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLS 376
           A +    M S  C   VV+Y IL+ G  +   +     +   +I+ G   +   +N+L+ 
Sbjct: 318 AMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIH 377

Query: 377 GLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKN------NCVQEAVKLF-HML 429
              ++G   YA KL  +M     +P    YNILI G+C N      + ++ A K +  ML
Sbjct: 378 AYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEML 437

Query: 430 EMN-------------------KFEFGIEI---------------FNCLIDGLCKAGRLD 455
           + +                   KFE    I               ++ +I  LC A ++D
Sbjct: 438 DAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVD 497

Query: 456 NAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLM 515
           NA+ LF ++    +VP V TY+I+I   C+ G L++A  +   M ++GCAPNVVT+  L+
Sbjct: 498 NAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALI 557

Query: 516 HGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
           H +L+  K S   EL   M       +P+  T++ ++D
Sbjct: 558 HAYLKARKMSSANELFEMML--SEGCIPNVVTYTALID 593


>gi|356551783|ref|XP_003544253.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 576

 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 153/525 (29%), Positives = 249/525 (47%), Gaps = 61/525 (11%)

Query: 10  LFSSETVSKVKLSSLFKSPRQIAAVSSPETQLNEFLHENCKSGIINLNEARYFFGYMTHM 69
           L  SE  SK  L+ +  SP ++    + E      L    ++G   L E   F  YMT+ 
Sbjct: 51  LQHSERFSKGALNGVESSPDRVNTSLNFEESEIRHLRRLIRNG--ELEEGSRFLEYMTNK 108

Query: 70  QPSPPISSFNLL---FGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERG 126
             SP + +   L   F  + + ++   ++     L   G + D  + N+LI+       G
Sbjct: 109 GKSPDVIACTALIREFCKIGRTKNASQIMGI---LEESGAVIDVTSYNVLIS-------G 158

Query: 127 LCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALR-LHKKMVSGDYEN 185
            C    I+EA  +   M   GV P+  TY  ++   C  G L  A++ L +++ S  Y  
Sbjct: 159 YCKSGEIEEALRVLDRM---GVSPNAATYDAVLCSLCDRGKLKQAMQVLGRQLQSKCY-- 213

Query: 186 GLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFC------ 239
                 ++ + +++ID+ CKE  V +A +LF EM+ +G  P VV    LI GFC      
Sbjct: 214 -----PDVVTCTVLIDATCKESGVGQAMKLFNEMRNKGCKPDVVTYNVLIKGFCKGGRLD 268

Query: 240 -----------------------------CAGNWEEVNGLFIEMLDLGPRPNLLTFNVMI 270
                                          G W +   L   ML  G  P+++TFN++I
Sbjct: 269 EAIRFLKKLPSYGCQPDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCLPSVVTFNILI 328

Query: 271 DCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCK 330
           + LC+ G + +A  +LE+M + G  P+  ++N L+ G+C    ID A E    M S+GC 
Sbjct: 329 NFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNGKGIDRAIEYLEIMVSRGCY 388

Query: 331 HTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKL 390
             +V+YNIL+   CK   V++A+ +  Q+ S G   ++I+YNT++ GL + G+A  A +L
Sbjct: 389 PDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVEL 448

Query: 391 FDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCK 450
            +EM    ++PDL T   ++ GL +   V+EA+K FH L+         I+N +I GLCK
Sbjct: 449 LEEMCYKGLKPDLITCTSVVGGLSREGKVREAMKFFHYLKRFAIRPNAFIYNSIITGLCK 508

Query: 451 AGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDF 495
           + +   A +    +  KG  PT  TY+ +I G+  +G  E A+  
Sbjct: 509 SQQTSLAIDFLADMVAKGCKPTEATYTTLIKGITYEGLAEDASKL 553



 Score =  209 bits (531), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 143/522 (27%), Positives = 252/522 (48%), Gaps = 28/522 (5%)

Query: 60  RYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVIS---------FYRKLVSIGLLPDF 110
           R+  G +  ++ SP   + +L F   ++ RH   +I          F   + + G  PD 
Sbjct: 56  RFSKGALNGVESSPDRVNTSLNFEE-SEIRHLRRLIRNGELEEGSRFLEYMTNKGKSPDV 114

Query: 111 LTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSV 170
           +    LI       R  C   R K A+ +   +   G   DV +Y  LI+G+C++G +  
Sbjct: 115 IACTALI-------REFCKIGRTKNASQIMGILEESGAVIDVTSYNVLISGYCKSGEIEE 167

Query: 171 ALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVV 230
           ALR+  +M       G+    N  +Y  ++ SLC  G + +A ++          P VV 
Sbjct: 168 ALRVLDRM-------GV--SPNAATYDAVLCSLCDRGKLKQAMQVLGRQLQSKCYPDVVT 218

Query: 231 CTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMI 290
           CT LI   C      +   LF EM + G +P+++T+NV+I   CKGG+++EA   L+ + 
Sbjct: 219 CTVLIDATCKESGVGQAMKLFNEMRNKGCKPDVVTYNVLIKGFCKGGRLDEAIRFLKKLP 278

Query: 291 QRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVE 350
             G  PD  ++N ++   C  GR   A ++  +M  KGC  +VV++NILIN  C+   + 
Sbjct: 279 SYGCQPDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCLPSVVTFNILINFLCQKGLLG 338

Query: 351 EAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILI 410
           +A+++   +  +G      ++N L+ G         A +  + M      PD+ TYNIL+
Sbjct: 339 KALNVLEMMPKHGHTPNSRSFNPLIQGFCNGKGIDRAIEYLEIMVSRGCYPDIVTYNILL 398

Query: 411 DGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLV 470
             LCK+  V +AV +   L        +  +N +IDGL K G+ + A EL  ++  KGL 
Sbjct: 399 TALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLK 458

Query: 471 PTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVEL 530
           P ++T + ++ GL R+GK+ +A  F  Y+++    PN   +N+++ G  ++ +TS  ++ 
Sbjct: 459 PDLITCTSVVGGLSREGKVREAMKFFHYLKRFAIRPNAFIYNSIITGLCKSQQTSLAIDF 518

Query: 531 LHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKSSY 572
           L  M    +   P + T++ ++  +  +    + S +S   Y
Sbjct: 519 LADMV--AKGCKPTEATYTTLIKGITYEGLAEDASKLSNELY 558



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/377 (26%), Positives = 169/377 (44%), Gaps = 40/377 (10%)

Query: 29  RQIAAVSSPET-QLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAK 87
           RQ+ +   P+       +   CK     + +A   F  M +    P + ++N+L     K
Sbjct: 206 RQLQSKCYPDVVTCTVLIDATCKES--GVGQAMKLFNEMRNKGCKPDVVTYNVLIKGFCK 263

Query: 88  NRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFG 147
               D  I F +KL S G  PD ++ N+++       R LC   R  +A  L   M+  G
Sbjct: 264 GGRLDEAIRFLKKLPSYGCQPDVISHNMIL-------RSLCSGGRWMDAMKLLATMLRKG 316

Query: 148 VRPDVITYGTLINGFCRTGNLSVAL---------------RLHKKMVSG----------- 181
             P V+T+  LIN  C+ G L  AL               R    ++ G           
Sbjct: 317 CLPSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNGKGIDRAI 376

Query: 182 DYENGLISK---TNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGF 238
           +Y   ++S+    +I +Y+I++ +LCK+G VD A  +  ++  +G +P+++   T+I G 
Sbjct: 377 EYLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGL 436

Query: 239 CCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDR 298
              G  E    L  EM   G +P+L+T   ++  L + GK+ EA      + +  + P+ 
Sbjct: 437 LKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVREAMKFFHYLKRFAIRPNA 496

Query: 299 FTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQ 358
           F YNS++ G C   +   A +    M +KGCK T  +Y  LI G       E+A  L  +
Sbjct: 497 FIYNSIITGLCKSQQTSLAIDFLADMVAKGCKPTEATYTTLIKGITYEGLAEDASKLSNE 556

Query: 359 IISNG-VRQTVITYNTL 374
           + S G V+++++   +L
Sbjct: 557 LYSRGLVKRSLVEKVSL 573


>gi|326523953|dbj|BAJ96987.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 1092

 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 137/488 (28%), Positives = 252/488 (51%), Gaps = 15/488 (3%)

Query: 77  SFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEA 136
           ++N L   + K+      +  Y+ + + G++P   T ++L+  FG +     V       
Sbjct: 173 TYNGLIYFLVKSGFDREAMDVYKAMAADGVVPTVRTYSVLMLAFGKRRDAETV------- 225

Query: 137 TWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSY 196
             L   M A GVRP+V +Y   I    + G L  A R+ +KM     E G   K ++ + 
Sbjct: 226 VGLLGEMEARGVRPNVYSYTICIRVLGQAGRLEEAYRILRKM----EEEG--CKPDVVTN 279

Query: 197 SIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLD 256
           +++I  LC  G +  AK++F +MK     P  V   TL+     +G+   V+ ++  +  
Sbjct: 280 TVLIQILCDAGRLADAKDVFWKMKASDQKPDRVTYITLLDKCGDSGDSRSVSEIWNALKA 339

Query: 257 LGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDT 316
            G   N++++   +D LC+ G+++EA  + + M Q+G+ P +++YNSL+ G+    R + 
Sbjct: 340 DGYNDNVVSYTAAVDALCQVGRVDEALDVFDEMKQKGIIPQQYSYNSLISGFLKADRFNR 399

Query: 317 AREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLS 376
           A E+F  M+  G      ++ + IN + K     +A+  Y  + S G+   V+  N +L 
Sbjct: 400 ALELFNHMNIHGPTPNGYTHVLFINYHGKSGESLKALKRYELMKSKGIVPDVVAGNAVLY 459

Query: 377 GLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEF 436
           GL + G+ G A+++F E+K   + PD  TY ++I    K +   EA+K+F  +  N+   
Sbjct: 460 GLAKTGRLGMAKRVFHELKAMGISPDNITYTMMIKCCSKASNADEAMKIFAEMIENRCAP 519

Query: 437 GIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFL 496
            +   N LID L KAGR + AW++F++L +  L PT  TY+ ++ GL R+GK+++    L
Sbjct: 520 DVLAMNSLIDMLYKAGRGNEAWKIFYELKEMNLEPTDCTYNTLLAGLGREGKVKEVMQLL 579

Query: 497 LYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLA 556
             M  N   PN++T+NT++    +N + +  +++L+ M       +PD ++++ V+  L 
Sbjct: 580 EGMNSNSFPPNIITYNTVLDCLCKNGEVNYALDMLYSMT--MNGCMPDLSSYNTVMYGLV 637

Query: 557 KDEKYHEC 564
           K+ +  E 
Sbjct: 638 KEGRLDEA 645



 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 137/516 (26%), Positives = 251/516 (48%), Gaps = 39/516 (7%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
           P + ++++L  A  K R  + V+    ++ + G+ P+  +  I I   G          R
Sbjct: 204 PTVRTYSVLMLAFGKRRDAETVVGLLGEMEARGVRPNVYSYTICIRVLGQA-------GR 256

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLIS--- 189
           ++EA  + + M   G +PDV+T   LI   C  G L+ A  +  KM + D +   ++   
Sbjct: 257 LEEAYRILRKMEEEGCKPDVVTNTVLIQILCDAGRLADAKDVFWKMKASDQKPDRVTYIT 316

Query: 190 --------------------------KTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRG 223
                                       N+ SY+  +D+LC+ G VD+A ++F EMK +G
Sbjct: 317 LLDKCGDSGDSRSVSEIWNALKADGYNDNVVSYTAAVDALCQVGRVDEALDVFDEMKQKG 376

Query: 224 INPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEAN 283
           I P      +LI GF  A  +     LF  M   GP PN  T  + I+   K G+  +A 
Sbjct: 377 IIPQQYSYNSLISGFLKADRFNRALELFNHMNIHGPTPNGYTHVLFINYHGKSGESLKAL 436

Query: 284 GLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGY 343
              ELM  +G+ PD    N+++ G    GR+  A+ +F  + + G     ++Y ++I   
Sbjct: 437 KRYELMKSKGIVPDVVAGNAVLYGLAKTGRLGMAKRVFHELKAMGISPDNITYTMMIKCC 496

Query: 344 CKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDL 403
            K  N +EAM ++ ++I N     V+  N+L+  L++AG+   A K+F E+K  N+EP  
Sbjct: 497 SKASNADEAMKIFAEMIENRCAPDVLAMNSLIDMLYKAGRGNEAWKIFYELKEMNLEPTD 556

Query: 404 STYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHK 463
            TYN L+ GL +   V+E ++L   +  N F   I  +N ++D LCK G ++ A ++ + 
Sbjct: 557 CTYNTLLAGLGREGKVKEVMQLLEGMNSNSFPPNIITYNTVLDCLCKNGEVNYALDMLYS 616

Query: 464 LPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYME-KNGCAPNVVTFNTLMHGFLQNN 522
           +   G +P + +Y+ +++GL ++G+L++A  F ++ + K   AP+  T  T++  F+++ 
Sbjct: 617 MTMNGCMPDLSSYNTVMYGLVKEGRLDEA--FWMFCQMKKVLAPDYATVCTILPSFVRSG 674

Query: 523 KTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKD 558
              + +  + +      + V   +  S++  +L +D
Sbjct: 675 LMKEALHTVREYILQPDSKVDRSSVHSLMEGILKRD 710



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 139/470 (29%), Positives = 229/470 (48%), Gaps = 19/470 (4%)

Query: 73   PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
            P I ++N +   + KN   +  +     +   G +PD  + N ++        GL  E R
Sbjct: 589  PNIITYNTVLDCLCKNGEVNYALDMLYSMTMNGCMPDLSSYNTVM-------YGLVKEGR 641

Query: 133  IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALR-LHKKMVSGDYENGLISKT 191
            + EA W+F  M    + PD  T  T++  F R+G +  AL  + + ++  D      SK 
Sbjct: 642  LDEAFWMFCQMKKV-LAPDYATVCTILPSFVRSGLMKEALHTVREYILQPD------SKV 694

Query: 192  NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
            +  S   +++ + K    +K+ E    +   G+    +  + +I  FC        + L 
Sbjct: 695  DRSSVHSLMEGILKRDGTEKSIEFAENIASSGLLLDDLFLSPIIRHFCKHKEALAAHELV 754

Query: 252  IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
             +  +LG      ++N +I  L     I+ A  L   M + G +PD FTY+ ++D     
Sbjct: 755  KKFENLGVSLKTGSYNALICGLVDEDLIDIAEELFSEMKRLGCDPDEFTYHLILDAMGKS 814

Query: 312  GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
             RI+   +I   MH+KG K T V+YN +I+G  K   ++EA++LY Q++S G   T  TY
Sbjct: 815  MRIEDMLKIQEEMHNKGYKSTYVTYNTIISGLVKSKMLDEAINLYYQLMSEGFSPTPCTY 874

Query: 372  NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
              LL GL + G    A+ LFDEM     EP+ + YNIL++G       ++  +LF  +  
Sbjct: 875  GPLLDGLLKDGNIEDAEALFDEMLECGCEPNCAIYNILLNGYRIAGDTEKVCELFESMVE 934

Query: 432  NKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEK 491
                  I+ +  +ID LC  GRL++    F +L   GL P ++TY+++IHGL + G+LE+
Sbjct: 935  QGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDLITYNLLIHGLGKSGRLEE 994

Query: 492  ANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKV----VELLHKMAEP 537
            A      MEK G APN+ T+N+L+    +  K ++      ELL K  +P
Sbjct: 995  ALSLYNDMEKKGIAPNLYTYNSLILYLGKAGKAAEAGKMYEELLAKGWKP 1044



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 133/553 (24%), Positives = 253/553 (45%), Gaps = 54/553 (9%)

Query: 49   CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
            C S   N +EA   F  M   + +P + + N L   + K    +     + +L  + L P
Sbjct: 495  CCSKASNADEAMKIFAEMIENRCAPDVLAMNSLIDMLYKAGRGNEAWKIFYELKEMNLEP 554

Query: 109  DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
               T N L+        GL  E ++KE   L + M +    P++ITY T+++  C+ G +
Sbjct: 555  TDCTYNTLL-------AGLGREGKVKEVMQLLEGMNSNSFPPNIITYNTVLDCLCKNGEV 607

Query: 169  SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
            + AL +   M      NG +   ++ SY+ ++  L KEG +D+A  +F +MK + + P  
Sbjct: 608  NYALDMLYSMTM----NGCMP--DLSSYNTVMYGLVKEGRLDEAFWMFCQMK-KVLAPDY 660

Query: 229  VVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRP--------------------------- 261
                T++  F  +G  +E      E + L P                             
Sbjct: 661  ATVCTILPSFVRSGLMKEALHTVREYI-LQPDSKVDRSSVHSLMEGILKRDGTEKSIEFA 719

Query: 262  -NLLTFNVMIDCL---------CKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
             N+ +  +++D L         CK  +   A+ L++     G++    +YN+L+ G    
Sbjct: 720  ENIASSGLLLDDLFLSPIIRHFCKHKEALAAHELVKKFENLGVSLKTGSYNALICGLVDE 779

Query: 312  GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
              ID A E+F  M   GC     +Y+++++   K + +E+ + +  ++ + G + T +TY
Sbjct: 780  DLIDIAEELFSEMKRLGCDPDEFTYHLILDAMGKSMRIEDMLKIQEEMHNKGYKSTYVTY 839

Query: 372  NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
            NT++SGL ++     A  L+ ++      P   TY  L+DGL K+  +++A  LF  +  
Sbjct: 840  NTIISGLVKSKMLDEAINLYYQLMSEGFSPTPCTYGPLLDGLLKDGNIEDAEALFDEMLE 899

Query: 432  NKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEK 491
               E    I+N L++G   AG  +   ELF  + ++G+ P + +Y+++I  LC  G+L  
Sbjct: 900  CGCEPNCAIYNILLNGYRIAGDTEKVCELFESMVEQGMNPDIKSYTVVIDTLCADGRLND 959

Query: 492  ANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIV 551
               +   +   G  P+++T+N L+HG  ++ +  + + L + M   ++ + P+  T++ +
Sbjct: 960  GLSYFKQLTDMGLEPDLITYNLLIHGLGKSGRLEEALSLYNDME--KKGIAPNLYTYNSL 1017

Query: 552  VDLLAKDEKYHEC 564
            +  L K  K  E 
Sbjct: 1018 ILYLGKAGKAAEA 1030



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 136/501 (27%), Positives = 223/501 (44%), Gaps = 40/501 (7%)

Query: 49   CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
            CK+G +N   A      MT     P +SS+N +   + K    D     + ++  + L P
Sbjct: 602  CKNGEVNY--ALDMLYSMTMNGCMPDLSSYNTVMYGLVKEGRLDEAFWMFCQMKKV-LAP 658

Query: 109  DFLTLNILINCFGN----KE-------------------------RGLCVENRIKEATWL 139
            D+ T+  ++  F      KE                          G+   +  +++   
Sbjct: 659  DYATVCTILPSFVRSGLMKEALHTVREYILQPDSKVDRSSVHSLMEGILKRDGTEKSIEF 718

Query: 140  FKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYEN-GLISKTNIFSYSI 198
             +N+ + G+  D +    +I  FC+      A  L KK     +EN G+  KT   SY+ 
Sbjct: 719  AENIASSGLLLDDLFLSPIIRHFCKHKEALAAHELVKK-----FENLGVSLKTG--SYNA 771

Query: 199  IIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLG 258
            +I  L  E L+D A+ELF EMK  G +P       ++     +   E++  +  EM + G
Sbjct: 772  LICGLVDEDLIDIAEELFSEMKRLGCDPDEFTYHLILDAMGKSMRIEDMLKIQEEMHNKG 831

Query: 259  PRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAR 318
             +   +T+N +I  L K   ++EA  L   ++  G +P   TY  L+DG    G I+ A 
Sbjct: 832  YKSTYVTYNTIISGLVKSKMLDEAINLYYQLMSEGFSPTPCTYGPLLDGLLKDGNIEDAE 891

Query: 319  EIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGL 378
             +F  M   GC+     YNIL+NGY    + E+   L+  ++  G+   + +Y  ++  L
Sbjct: 892  ALFDEMLECGCEPNCAIYNILLNGYRIAGDTEKVCELFESMVEQGMNPDIKSYTVVIDTL 951

Query: 379  FQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGI 438
               G+       F ++    +EPDL TYN+LI GL K+  ++EA+ L++ +E       +
Sbjct: 952  CADGRLNDGLSYFKQLTDMGLEPDLITYNLLIHGLGKSGRLEEALSLYNDMEKKGIAPNL 1011

Query: 439  EIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLY 498
              +N LI  L KAG+   A +++ +L  KG  P V TY+ +I G    G  E A      
Sbjct: 1012 YTYNSLILYLGKAGKAAEAGKMYEELLAKGWKPNVFTYNALIRGYSVSGSPENAFAAYGR 1071

Query: 499  MEKNGCAPNVVTFNTLMHGFL 519
            M   GC PN  T+  L +  L
Sbjct: 1072 MIVGGCRPNSSTYMQLPNQML 1092



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 92/410 (22%), Positives = 178/410 (43%), Gaps = 11/410 (2%)

Query: 158 LINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFL 217
           L+    R G+++    L ++          I K N+ ++  +  ++  EG +  A     
Sbjct: 110 LMRAHGRVGDVAQVFDLMQRQ---------IIKANVGTFCTVFGAVGVEGGLRSAPVALP 160

Query: 218 EMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGG 277
            MK  GI         LI+    +G   E   ++  M   G  P + T++V++    K  
Sbjct: 161 VMKEAGIVLNAYTYNGLIYFLVKSGFDREAMDVYKAMAADGVVPTVRTYSVLMLAFGKRR 220

Query: 278 KINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYN 337
                 GLL  M  RG+ P+ ++Y   +      GR++ A  I   M  +GCK  VV+  
Sbjct: 221 DAETVVGLLGEMEARGVRPNVYSYTICIRVLGQAGRLEEAYRILRKMEEEGCKPDVVTNT 280

Query: 338 ILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLY 397
           +LI   C    + +A  ++ ++ ++  +   +TY TLL     +G +    ++++ +K  
Sbjct: 281 VLIQILCDAGRLADAKDVFWKMKASDQKPDRVTYITLLDKCGDSGDSRSVSEIWNALKAD 340

Query: 398 NVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNA 457
               ++ +Y   +D LC+   V EA+ +F  ++          +N LI G  KA R + A
Sbjct: 341 GYNDNVVSYTAAVDALCQVGRVDEALDVFDEMKQKGIIPQQYSYNSLISGFLKADRFNRA 400

Query: 458 WELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHG 517
            ELF+ +   G  P   T+ + I+   + G+  KA      M+  G  P+VV  N +++G
Sbjct: 401 LELFNHMNIHGPTPNGYTHVLFINYHGKSGESLKALKRYELMKSKGIVPDVVAGNAVLYG 460

Query: 518 FLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAV 567
             +  +      + H++      + PD+ T+++++   +K     E   +
Sbjct: 461 LAKTGRLGMAKRVFHELK--AMGISPDNITYTMMIKCCSKASNADEAMKI 508



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 90/371 (24%), Positives = 167/371 (45%), Gaps = 9/371 (2%)

Query: 207 GLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTF 266
           G V    ++F  M+ + I   V    T+       G           M + G   N  T+
Sbjct: 115 GRVGDVAQVFDLMQRQIIKANVGTFCTVFGAVGVEGGLRSAPVALPVMKEAGIVLNAYTY 174

Query: 267 NVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHS 326
           N +I  L K G   EA  + + M   G+ P   TY+ LM  +      +T   +   M +
Sbjct: 175 NGLIYFLVKSGFDREAMDVYKAMAADGVVPTVRTYSVLMLAFGKRRDAETVVGLLGEMEA 234

Query: 327 KGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGY 386
           +G +  V SY I I    +   +EEA  + R++   G +  V+T   L+  L  AG+   
Sbjct: 235 RGVRPNVYSYTICIRVLGQAGRLEEAYRILRKMEEEGCKPDVVTNTVLIQILCDAGRLAD 294

Query: 387 AQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLID 446
           A+ +F +MK  + +PD  TY  L+D    +   +   ++++ L+ + +   +  +   +D
Sbjct: 295 AKDVFWKMKASDQKPDRVTYITLLDKCGDSGDSRSVSEIWNALKADGYNDNVVSYTAAVD 354

Query: 447 GLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAP 506
            LC+ GR+D A ++F ++ QKG++P   +Y+ +I G  +  +  +A +   +M  +G  P
Sbjct: 355 ALCQVGRVDEALDVFDEMKQKGIIPQQYSYNSLISGFLKADRFNRALELFNHMNIHGPTP 414

Query: 507 NVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEK------ 560
           N  T    ++   ++ ++ K ++    M    + +VPD    + V+  LAK  +      
Sbjct: 415 NGYTHVLFINYHGKSGESLKALKRYELMK--SKGIVPDVVAGNAVLYGLAKTGRLGMAKR 472

Query: 561 -YHECSAVSKS 570
            +HE  A+  S
Sbjct: 473 VFHELKAMGIS 483


>gi|414586649|tpg|DAA37220.1| TPA: hypothetical protein ZEAMMB73_348855 [Zea mays]
 gi|414586650|tpg|DAA37221.1| TPA: hypothetical protein ZEAMMB73_348855 [Zea mays]
          Length = 969

 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 147/538 (27%), Positives = 256/538 (47%), Gaps = 64/538 (11%)

Query: 71  PSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILI------------- 117
           P+P  S FN L  +    R Y        ++   G  P ++  NI I             
Sbjct: 342 PNP--SLFNSLVHSYCNARDYPYAYKLLNRMAGCGCPPGYVVYNIFIGSICSGEELPSPD 399

Query: 118 ---------------NCFGNK------ERGLCVENRIKEATWLFKNMIAFGVRPDVITYG 156
                          +C  NK       R LC   +  +A  + K M+  G  PD  TY 
Sbjct: 400 LLALAEKVYEEMLASSCVLNKVNTANFARCLCGMGKFDKAFQIIKLMMRKGFVPDTSTYS 459

Query: 157 TLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELF 216
            +I   C    +  A  L ++M S     G+I   ++++Y+I+IDS CK GL+++A+  F
Sbjct: 460 KVITFLCEAMKVEKAFLLFQEMKS----VGVIP--DVYTYTILIDSFCKVGLIEQARSWF 513

Query: 217 LEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKG 276
            EM+  G +P+VV  T L+H +       + + +F  M+D G  PN +T++ ++D LCK 
Sbjct: 514 DEMESVGCSPSVVTYTALLHAYLKTKQVPQASDIFHRMVDAGCAPNTITYSALVDGLCKA 573

Query: 277 GKINEANGLLELMIQRGLN----------------PDRFTYNSLMDGYCLVGRIDTAREI 320
           G+  +A  +   MI    N                P+  TY +L+DG C   ++  A+E+
Sbjct: 574 GESQKACEVYAKMIGTSDNVGSDFYFEGEHTDSIAPNVVTYGALIDGLCKAHKVVDAQEL 633

Query: 321 FLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQ 380
              M S GC+   + Y+ LI+G+CK+  ++ A  ++ ++   G   TV TY +L+  +F+
Sbjct: 634 LDVMSSNGCEPNHIIYDALIDGFCKVGKLDNAQEVFFRMSKCGYLPTVHTYTSLIDAMFK 693

Query: 381 AGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEI 440
             +   A K+  +M   +  P++ TY  +IDGLC+    Q+A+KL  M+E       +  
Sbjct: 694 DRRLDLAIKVLSQMLESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEKRGCNPNVVT 753

Query: 441 FNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYME 500
           +  LIDGL K+G++D + +LF ++  +G  P  VTY ++I+  C  G L++A+  L  M+
Sbjct: 754 YTSLIDGLGKSGKVDMSLQLFTQMITQGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEMK 813

Query: 501 KNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERN-LVPDDTTFSIVVDLLAK 557
           +      V  + +++ GF     + K +  L  + E E + +V     + +++D  +K
Sbjct: 814 QTYWPKYVQGYCSVVQGF-----SKKFIASLGLLEELESHGMVSIAPVYGLLIDSFSK 866



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 127/498 (25%), Positives = 231/498 (46%), Gaps = 26/498 (5%)

Query: 54  INLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTL 113
           + + +A   F  M  +   P + ++ +L  +  K    +   S++ ++ S+G  P  +T 
Sbjct: 469 MKVEKAFLLFQEMKSVGVIPDVYTYTILIDSFCKVGLIEQARSWFDEMESVGCSPSVVTY 528

Query: 114 NILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALR 173
             L++ +   ++       + +A+ +F  M+  G  P+ ITY  L++G C+ G    A  
Sbjct: 529 TALLHAYLKTKQ-------VPQASDIFHRMVDAGCAPNTITYSALVDGLCKAGESQKACE 581

Query: 174 LHKKMV------------SGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKG 221
           ++ KM+             G++ + +    N+ +Y  +ID LCK   V  A+EL   M  
Sbjct: 582 VYAKMIGTSDNVGSDFYFEGEHTDSI--APNVVTYGALIDGLCKAHKVVDAQELLDVMSS 639

Query: 222 RGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINE 281
            G  P  ++   LI GFC  G  +    +F  M   G  P + T+  +ID + K  +++ 
Sbjct: 640 NGCEPNHIIYDALIDGFCKVGKLDNAQEVFFRMSKCGYLPTVHTYTSLIDAMFKDRRLDL 699

Query: 282 ANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILIN 341
           A  +L  M++    P+  TY +++DG C +G    A ++   M  +GC   VV+Y  LI+
Sbjct: 700 AIKVLSQMLESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEKRGCNPNVVTYTSLID 759

Query: 342 GYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEP 401
           G  K   V+ ++ L+ Q+I+ G     +TY  L++    AG    A  L  EMK      
Sbjct: 760 GLGKSGKVDMSLQLFTQMITQGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEMKQTYWPK 819

Query: 402 DLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELF 461
            +  Y  ++ G  K      ++ L   LE +       ++  LID   KAGRL+ A EL 
Sbjct: 820 YVQGYCSVVQGFSKK--FIASLGLLEELESHGMVSIAPVYGLLIDSFSKAGRLEKALELH 877

Query: 462 HKLPQKGL---VPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGF 518
            ++ +      + +  TY+ +I  LC   +LEKA +    + + G  P +  F  L+ G 
Sbjct: 878 KEMMEVSSSLNITSKDTYTSLIQALCLASQLEKAFELYSEITRKGVVPELSAFICLIKGL 937

Query: 519 LQNNKTSKVVELLHKMAE 536
           ++ NK ++ ++L + M +
Sbjct: 938 IKVNKWNEALQLCYSMCD 955



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 132/465 (28%), Positives = 223/465 (47%), Gaps = 40/465 (8%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CK G+I   +AR +F  M  +  SP + ++  L  A  K +        + ++V  G  P
Sbjct: 501 CKVGLIE--QARSWFDEMESVGCSPSVVTYTALLHAYLKTKQVPQASDIFHRMVDAGCAP 558

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFG----------------VRPDV 152
           + +T + L++       GLC     ++A  ++  MI                   + P+V
Sbjct: 559 NTITYSALVD-------GLCKAGESQKACEVYAKMIGTSDNVGSDFYFEGEHTDSIAPNV 611

Query: 153 ITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKA 212
           +TYG LI+G C+   +  A  L   M S    NG   + N   Y  +ID  CK G +D A
Sbjct: 612 VTYGALIDGLCKAHKVVDAQELLDVMSS----NG--CEPNHIIYDALIDGFCKVGKLDNA 665

Query: 213 KELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDC 272
           +E+F  M   G  P V   T+LI         +    +  +ML+    PN++T+  MID 
Sbjct: 666 QEVFFRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAIKVLSQMLESSCTPNVVTYTAMIDG 725

Query: 273 LCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHT 332
           LC+ G+  +A  LL +M +RG NP+  TY SL+DG    G++D + ++F  M ++GC   
Sbjct: 726 LCRIGECQKALKLLSMMEKRGCNPNVVTYTSLIDGLGKSGKVDMSLQLFTQMITQGCAPN 785

Query: 333 VVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFD 392
            V+Y +LIN  C    ++EA SL  ++      + V  Y +++ G  +   A     L +
Sbjct: 786 YVTYRVLINHCCAAGLLDEAHSLLSEMKQTYWPKYVQGYCSVVQGFSKKFIASLG--LLE 843

Query: 393 EMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEI-----FNCLIDG 447
           E++ + +      Y +LID   K   +++A++L    EM +    + I     +  LI  
Sbjct: 844 ELESHGMVSIAPVYGLLIDSFSKAGRLEKALELHK--EMMEVSSSLNITSKDTYTSLIQA 901

Query: 448 LCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKA 492
           LC A +L+ A+EL+ ++ +KG+VP +  +  +I GL +  K  +A
Sbjct: 902 LCLASQLEKAFELYSEITRKGVVPELSAFICLIKGLIKVNKWNEA 946



 Score =  145 bits (365), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 133/571 (23%), Positives = 221/571 (38%), Gaps = 106/571 (18%)

Query: 82  FGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFK 141
           + A+A+  H+D       +L+      D   L  L+N      R  C      +A     
Sbjct: 140 YNALAEVLHFDDRARTTERLLREIGEDDREVLGRLLNVI---VRKCCRHGAWAKALEELG 196

Query: 142 NMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIID 201
            +  FG RP   TY  L+      G + +  R+ K+M     E G    T+ F+      
Sbjct: 197 RLKDFGYRPSGATYNALVQVLATAGQMDMGFRVQKEMS----ELGFC--TDKFTVGCFAQ 250

Query: 202 SLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRP 261
           +LCKEG   +  +  + ++        V+CT +I G   A  ++E       M      P
Sbjct: 251 ALCKEG---RWSDALVMIEREDFKLDTVLCTQMISGLMEASLFDEAISFLHRMRCNSCIP 307

Query: 262 NLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIF 321
           N++T+  ++    K  ++     ++ +M+  G NP+   +NSL+  YC       A ++ 
Sbjct: 308 NVVTYRTLLAGFLKKKQLGWCKRIISMMMNEGCNPNPSLFNSLVHSYCNARDYPYAYKLL 367

Query: 322 LSMHSKGCKHTVVSYNILINGYCK-------------------------ILN-------- 348
             M   GC    V YNI I   C                          +LN        
Sbjct: 368 NRMAGCGCPPGYVVYNIFIGSICSGEELPSPDLLALAEKVYEEMLASSCVLNKVNTANFA 427

Query: 349 --------VEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVE 400
                    ++A  + + ++  G      TY+ +++ L +A +   A  LF EMK   V 
Sbjct: 428 RCLCGMGKFDKAFQIIKLMMRKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVI 487

Query: 401 PDLSTYNILIDGLCKNNCVQEAVKLFHMLE--------------------MNKFEFGIEI 440
           PD+ TY ILID  CK   +++A   F  +E                      +     +I
Sbjct: 488 PDVYTYTILIDSFCKVGLIEQARSWFDEMESVGCSPSVVTYTALLHAYLKTKQVPQASDI 547

Query: 441 FN---------------CLIDGLCKAGRLDNAWELFHKL----------------PQKGL 469
           F+                L+DGLCKAG    A E++ K+                    +
Sbjct: 548 FHRMVDAGCAPNTITYSALVDGLCKAGESQKACEVYAKMIGTSDNVGSDFYFEGEHTDSI 607

Query: 470 VPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVE 529
            P VVTY  +I GLC+  K+  A + L  M  NGC PN + ++ L+ GF +  K     E
Sbjct: 608 APNVVTYGALIDGLCKAHKVVDAQELLDVMSSNGCEPNHIIYDALIDGFCKVGKLDNAQE 667

Query: 530 LLHKMAEPERNLVPDDTTFSIVVDLLAKDEK 560
           +  +M++     +P   T++ ++D + KD +
Sbjct: 668 VFFRMSKC--GYLPTVHTYTSLIDAMFKDRR 696



 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 82/319 (25%), Positives = 147/319 (46%), Gaps = 20/319 (6%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CK G   L+ A+  F  M+     P + ++  L  A+ K+R  D  I    +++     P
Sbjct: 657 CKVG--KLDNAQEVFFRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAIKVLSQMLESSCTP 714

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           + +T   +I+       GLC     ++A  L   M   G  P+V+TY +LI+G  ++G +
Sbjct: 715 NVVTYTAMID-------GLCRIGECQKALKLLSMMEKRGCNPNVVTYTSLIDGLGKSGKV 767

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
            ++L+L  +M++           N  +Y ++I+  C  GL+D+A  L  EMK       V
Sbjct: 768 DMSLQLFTQMITQG------CAPNYVTYRVLINHCCAAGLLDEAHSLLSEMKQTYWPKYV 821

Query: 229 VVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLEL 288
               +++ GF  +  +    GL  E+   G       + ++ID   K G++ +A  L + 
Sbjct: 822 QGYCSVVQGF--SKKFIASLGLLEELESHGMVSIAPVYGLLIDSFSKAGRLEKALELHKE 879

Query: 289 MIQ--RGLN-PDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCK 345
           M++    LN   + TY SL+   CL  +++ A E++  +  KG    + ++  LI G  K
Sbjct: 880 MMEVSSSLNITSKDTYTSLIQALCLASQLEKAFELYSEITRKGVVPELSAFICLIKGLIK 939

Query: 346 ILNVEEAMSLYRQIISNGV 364
           +    EA+ L   +   GV
Sbjct: 940 VNKWNEALQLCYSMCDEGV 958



 Score = 69.3 bits (168), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 60/277 (21%), Positives = 114/277 (41%), Gaps = 46/277 (16%)

Query: 21  LSSLFKSPRQIAAVSSPETQLNEFLHENCK----------SGIINLNEARYFFGYMTHMQ 70
           + ++FK  R   A+      L++ L  +C            G+  + E +     ++ M+
Sbjct: 688 IDAMFKDRRLDLAIKV----LSQMLESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMME 743

Query: 71  P---SPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILIN---CFGNKE 124
               +P + ++  L   + K+   D  +  + ++++ G  P+++T  +LIN     G  +
Sbjct: 744 KRGCNPNVVTYTSLIDGLGKSGKVDMSLQLFTQMITQGCAPNYVTYRVLINHCCAAGLLD 803

Query: 125 RGLCVENRIKEATW-----------------------LFKNMIAFGVRPDVITYGTLING 161
               + + +K+  W                       L + + + G+      YG LI+ 
Sbjct: 804 EAHSLLSEMKQTYWPKYVQGYCSVVQGFSKKFIASLGLLEELESHGMVSIAPVYGLLIDS 863

Query: 162 FCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKG 221
           F + G L  AL LHK+M+       + SK    +Y+ +I +LC    ++KA EL+ E+  
Sbjct: 864 FSKAGRLEKALELHKEMMEVSSSLNITSKD---TYTSLIQALCLASQLEKAFELYSEITR 920

Query: 222 RGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLG 258
           +G+ P +     LI G      W E   L   M D G
Sbjct: 921 KGVVPELSAFICLIKGLIKVNKWNEALQLCYSMCDEG 957


>gi|297849294|ref|XP_002892528.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297338370|gb|EFH68787.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 606

 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 130/392 (33%), Positives = 214/392 (54%), Gaps = 15/392 (3%)

Query: 126 GLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYEN 185
            L  +NR  +  +L+K MI   ++P+V T+  +IN  C+TG ++ A  + + M    Y  
Sbjct: 197 ALLKQNRSADVEYLYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGYS- 255

Query: 186 GLISKTNIFSYSIIIDSLCK---EGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAG 242
                 N+ SY+ +ID  CK    G + KA  +  EM    ++P +     LI GF    
Sbjct: 256 -----PNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENEVSPNLTTFNILIDGFWKDD 310

Query: 243 NWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYN 302
           N      +F EMLD    PN++T+N +I+ LC GGKINEA G+ + M+  G+ P+  TY+
Sbjct: 311 NLPGSLKVFKEMLDQDVIPNVITYNSLINGLCNGGKINEAIGMRDKMVSAGVQPNLITYH 370

Query: 303 SLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISN 362
           SL++G+C  G +  A ++F S+  +G + T   YN+LI+ YCK+  +++  +L  ++   
Sbjct: 371 SLINGFCKNGMMKEALDMFDSVKGQGTRPTTRMYNMLIDAYCKLGKIDDGFALKEEMERE 430

Query: 363 GVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEA 422
           G+   V TYN L++GL + G    A+KLFD++    + PDL T++IL++G C     ++A
Sbjct: 431 GIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTNKGL-PDLVTFHILMEGYCSRGESRKA 489

Query: 423 VKLFHMLEMNKFEFGIE--IFNCLIDGLCKAGRLDNAWELFHKL-PQKGLVPTVVTYSIM 479
             L    EM+K         +N ++ G CK G L  A  +  ++  ++ L   V +Y+++
Sbjct: 490 AMLLK--EMSKMGLKPRHLTYNIMMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVL 547

Query: 480 IHGLCRKGKLEKANDFLLYMEKNGCAPNVVTF 511
           + G  +KGKLE AN  L  M + G  PN +T+
Sbjct: 548 LQGYSQKGKLEDANMLLNEMLEKGLVPNRITY 579



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 106/367 (28%), Positives = 190/367 (51%), Gaps = 5/367 (1%)

Query: 202 SLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRP 261
           +L K+      + L+ EM  R I P V     +I+  C  G   +   +  +M   G  P
Sbjct: 197 ALLKQNRSADVEYLYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGYSP 256

Query: 262 NLLTFNVMIDCLCK---GGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAR 318
           N++++N +ID  CK    GK+ +A+ +L+ M++  ++P+  T+N L+DG+     +  + 
Sbjct: 257 NVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENEVSPNLTTFNILIDGFWKDDNLPGSL 316

Query: 319 EIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGL 378
           ++F  M  +     V++YN LING C    + EA+ +  +++S GV+  +ITY++L++G 
Sbjct: 317 KVFKEMLDQDVIPNVITYNSLINGLCNGGKINEAIGMRDKMVSAGVQPNLITYHSLINGF 376

Query: 379 FQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGI 438
            + G    A  +FD +K     P    YN+LID  CK   + +   L   +E       +
Sbjct: 377 CKNGMMKEALDMFDSVKGQGTRPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDV 436

Query: 439 EIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLY 498
             +NCLI GLC+ G ++ A +LF +L  KGL P +VT+ I++ G C +G+  KA   L  
Sbjct: 437 GTYNCLIAGLCRNGNIEAAKKLFDQLTNKGL-PDLVTFHILMEGYCSRGESRKAAMLLKE 495

Query: 499 MEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKD 558
           M K G  P  +T+N +M G+ +         +  +M E ER L  +  ++++++   ++ 
Sbjct: 496 MSKMGLKPRHLTYNIMMKGYCKEGNLKAATNMRTQM-EKERRLRMNVASYNVLLQGYSQK 554

Query: 559 EKYHECS 565
            K  + +
Sbjct: 555 GKLEDAN 561



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 99/318 (31%), Positives = 165/318 (51%), Gaps = 15/318 (4%)

Query: 66  MTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKER 125
           M   + SP +++FN+L     K+ +    +  +++++   ++P+ +T N LIN       
Sbjct: 287 MVENEVSPNLTTFNILIDGFWKDDNLPGSLKVFKEMLDQDVIPNVITYNSLIN------- 339

Query: 126 GLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYEN 185
           GLC   +I EA  +   M++ GV+P++ITY +LINGFC+ G +  AL +       D   
Sbjct: 340 GLCNGGKINEAIGMRDKMVSAGVQPNLITYHSLINGFCKNGMMKEALDMF------DSVK 393

Query: 186 GLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWE 245
           G  ++     Y+++ID+ CK G +D    L  EM+  GI P V     LI G C  GN E
Sbjct: 394 GQGTRPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIE 453

Query: 246 EVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLM 305
               LF ++ + G  P+L+TF+++++  C  G+  +A  LL+ M + GL P   TYN +M
Sbjct: 454 AAKKLFDQLTNKG-LPDLVTFHILMEGYCSRGESRKAAMLLKEMSKMGLKPRHLTYNIMM 512

Query: 306 DGYCLVGRIDTAREIFLSMH-SKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGV 364
            GYC  G +  A  +   M   +  +  V SYN+L+ GY +   +E+A  L  +++  G+
Sbjct: 513 KGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGL 572

Query: 365 RQTVITYNTLLSGLFQAG 382
               ITY  +   +   G
Sbjct: 573 VPNRITYEIVKEEMVDKG 590



 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 117/457 (25%), Positives = 216/457 (47%), Gaps = 57/457 (12%)

Query: 139 LFKNMIAFGVRPDV-ITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYS 197
           LF+ +I+  + PD+ + Y T +    +  ++SV+L L  K+        L S  N   YS
Sbjct: 70  LFRQLISSELNPDLCLRYYTWL---VKNRDISVSLELTFKL--------LHSLANAKRYS 118

Query: 198 II---IDSLCKEGLVDKAKELFLEMKG-RGINPAVVVCTTLIHGFCCAGNWEEVNGLFIE 253
            I   +D   + G   +   +F  +     +    ++   L+  +     +E     F  
Sbjct: 119 KIRSFLDGFVRNGSDHQVHSIFHAISMCDNVCVNSIIADMLVLAYANNSRFELGFEAFKR 178

Query: 254 MLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGR 313
               G + + ++   ++  L K  +  +   L + MI+R + P+ FT+N +++  C  G+
Sbjct: 179 SGYYGYKLSAMSCKPLMVALLKQNRSADVEYLYKEMIRRKIQPNVFTFNVVINALCKTGK 238

Query: 314 IDTAREIFLSMHSKGCKHTVVSYNILINGYCKIL---NVEEAMSLYRQIISNGVRQTVIT 370
           ++ AR++   M   G    VVSYN LI+GYCK+     + +A ++ ++++ N V   + T
Sbjct: 239 MNKARDVMEDMKVYGYSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENEVSPNLTT 298

Query: 371 YNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGL----------------- 413
           +N L+ G ++      + K+F EM   +V P++ TYN LI+GL                 
Sbjct: 299 FNILIDGFWKDDNLPGSLKVFKEMLDQDVIPNVITYNSLINGLCNGGKINEAIGMRDKMV 358

Query: 414 ------------------CKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLD 455
                             CKN  ++EA+ +F  ++         ++N LID  CK G++D
Sbjct: 359 SAGVQPNLITYHSLINGFCKNGMMKEALDMFDSVKGQGTRPTTRMYNMLIDAYCKLGKID 418

Query: 456 NAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLM 515
           + + L  ++ ++G+VP V TY+ +I GLCR G +E A      +   G  P++VTF+ LM
Sbjct: 419 DGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTNKGL-PDLVTFHILM 477

Query: 516 HGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVV 552
            G+    ++ K   LL +M+  +  L P   T++I++
Sbjct: 478 EGYCSRGESRKAAMLLKEMS--KMGLKPRHLTYNIMM 512



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 77/286 (26%), Positives = 137/286 (47%), Gaps = 15/286 (5%)

Query: 55  NLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLN 114
           NL  +   F  M      P + ++N L   +      +  I    K+VS G+ P+ +T +
Sbjct: 311 NLPGSLKVFKEMLDQDVIPNVITYNSLINGLCNGGKINEAIGMRDKMVSAGVQPNLITYH 370

Query: 115 ILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRL 174
            LIN       G C    +KEA  +F ++   G RP    Y  LI+ +C+ G +     L
Sbjct: 371 SLIN-------GFCKNGMMKEALDMFDSVKGQGTRPTTRMYNMLIDAYCKLGKIDDGFAL 423

Query: 175 HKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTL 234
            ++M       G++   ++ +Y+ +I  LC+ G ++ AK+LF ++  +G+ P +V    L
Sbjct: 424 KEEM----EREGIVP--DVGTYNCLIAGLCRNGNIEAAKKLFDQLTNKGL-PDLVTFHIL 476

Query: 235 IHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGL-LELMIQRG 293
           + G+C  G   +   L  EM  +G +P  LT+N+M+   CK G +  A  +  ++  +R 
Sbjct: 477 MEGYCSRGESRKAAMLLKEMSKMGLKPRHLTYNIMMKGYCKEGNLKAATNMRTQMEKERR 536

Query: 294 LNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNIL 339
           L  +  +YN L+ GY   G+++ A  +   M  KG     ++Y I+
Sbjct: 537 LRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIV 582



 Score = 83.2 bits (204), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 68/239 (28%), Positives = 109/239 (45%), Gaps = 17/239 (7%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CK+G+  + EA   F  +      P    +N+L  A  K    D   +   ++   G++P
Sbjct: 377 CKNGM--MKEALDMFDSVKGQGTRPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVP 434

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           D  T N LI        GLC    I+ A  LF  +   G+ PD++T+  L+ G+C  G  
Sbjct: 435 DVGTYNCLI-------AGLCRNGNIEAAKKLFDQLTNKGL-PDLVTFHILMEGYCSRGES 486

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEM-KGRGINPA 227
             A  L K+M     + GL  K    +Y+I++   CKEG +  A  +  +M K R +   
Sbjct: 487 RKAAMLLKEMS----KMGL--KPRHLTYNIMMKGYCKEGNLKAATNMRTQMEKERRLRMN 540

Query: 228 VVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLL 286
           V     L+ G+   G  E+ N L  EML+ G  PN +T+ ++ + +   G + +  G L
Sbjct: 541 VASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIVKEEMVDKGFVPDIEGHL 599


>gi|326506436|dbj|BAJ86536.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 616

 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 125/469 (26%), Positives = 228/469 (48%), Gaps = 17/469 (3%)

Query: 72  SPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVEN 131
           +PP+   +++  A  +   + + +   + L + G   D    N++++        +C + 
Sbjct: 142 TPPMC--HVILEAACRGGGFRSAVRALQVLHAKGCTLDSGNCNLVVS-------AICEQG 192

Query: 132 RIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMV------SGDYEN 185
            + E   L + + +FG  PD+++Y  ++ G C          L  +MV      S   E+
Sbjct: 193 CVDEGVELLRKLPSFGCEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVRVHEALSQMPEH 252

Query: 186 GLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWE 245
           G     ++  Y+ IID +CK+G  + A ++   M   G+ P VV   T++ G C A  WE
Sbjct: 253 G--CTPDLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWE 310

Query: 246 EVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLM 305
           E   L  EM       + +TFN+++D  C+ G ++    LLE M++ G  PD  TY +++
Sbjct: 311 EAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVI 370

Query: 306 DGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVR 365
           +G+C  G +D A  +  +M + GCK   +SY I++ G C+     +A  L   +I  G  
Sbjct: 371 NGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCL 430

Query: 366 QTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKL 425
              +T+NTL++ + + G A  A +L  +M +    PDL +Y+ +IDGL K    +EA++L
Sbjct: 431 PNPVTFNTLINFMCKKGLAEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALEL 490

Query: 426 FHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCR 485
            +++          I++ +   L + GR D   ++F  +    +      Y+ +I  LC+
Sbjct: 491 LNVMINKGITPNTIIYSSMASALSREGRTDKIIQMFDSIQDATVRSDAALYNAVISSLCK 550

Query: 486 KGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKM 534
           + + ++A DF  YM  NGC PN  T+  L+ G        +  +LL ++
Sbjct: 551 RWETDRAIDFFAYMVSNGCMPNESTYTILIRGLASEGLVREAQDLLSEL 599



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 124/449 (27%), Positives = 205/449 (45%), Gaps = 24/449 (5%)

Query: 125 RGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYE 184
           R LC   R  +A    + +   G    V+ Y  +I G+CR G ++ A RL   +      
Sbjct: 52  RSLCAAGRTADAA---RALDTAGDAAGVVAYNAMIAGYCRAGQVAAARRLAAAVPV---- 104

Query: 185 NGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNW 244
                  N ++Y  I+ SLC  GL+  A  +  EM  RG      +C  ++   C  G +
Sbjct: 105 -----PPNAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGF 159

Query: 245 EEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSL 304
                    +   G   +    N+++  +C+ G ++E   LL  +   G  PD  +YN++
Sbjct: 160 RSAVRALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAV 219

Query: 305 MDGYCLVGRIDTAREIFL----------SMHSKGCKHTVVSYNILINGYCKILNVEEAMS 354
           + G C+  R D   E+ +           M   GC   +  Y  +I+G CK  + E A  
Sbjct: 220 LKGLCMAKRWDDVEELMVEMVRVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVAND 279

Query: 355 LYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLC 414
           +  ++ S G++  V+ YNT+L GL  A +   A+ L  EM   +   D  T+NIL+D  C
Sbjct: 280 ILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFC 339

Query: 415 KNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVV 474
           +N  V   ++L   +  +     +  +  +I+G CK G +D A  L   +   G  P  +
Sbjct: 340 QNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTI 399

Query: 475 TYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKM 534
           +Y+I++ GLCR  +   A + + +M + GC PN VTFNTL++   +     + +ELL +M
Sbjct: 400 SYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLAEQAIELLKQM 459

Query: 535 AEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
                   PD  ++S V+D L K  K  E
Sbjct: 460 L--VNGCSPDLISYSTVIDGLGKAGKTEE 486



 Score =  135 bits (341), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 96/376 (25%), Positives = 178/376 (47%), Gaps = 20/376 (5%)

Query: 197 SIIIDSLCKEG-LVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEML 255
           S +I SLC  G   D A+ L       G    VV    +I G+C AG   +V        
Sbjct: 48  SALIRSLCAAGRTADAARALDTAGDAAG----VVAYNAMIAGYCRAG---QVAAARRLAA 100

Query: 256 DLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRID 315
            +   PN  T+  ++  LC  G I +A  +L+ M  RG        + +++  C  G   
Sbjct: 101 AVPVPPNAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFR 160

Query: 316 TAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLL 375
           +A      +H+KGC     + N++++  C+   V+E + L R++ S G    +++YN +L
Sbjct: 161 SAVRALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVL 220

Query: 376 SGLFQAGQAGYAQKL----------FDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKL 425
            GL  A +    ++L            +M  +   PDL  Y  +IDG+CK+   + A  +
Sbjct: 221 KGLCMAKRWDDVEELMVEMVRVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDI 280

Query: 426 FHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCR 485
              +     +  +  +N ++ GLC A R + A +L  ++ Q+      VT++I++   C+
Sbjct: 281 LSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQ 340

Query: 486 KGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDD 545
            G +++  + L  M ++GC P+V+T+ T+++GF +     + V LL  M+       P+ 
Sbjct: 341 NGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSAC--GCKPNT 398

Query: 546 TTFSIVVDLLAKDEKY 561
            +++IV+  L + E++
Sbjct: 399 ISYTIVLKGLCRAERW 414



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 84/296 (28%), Positives = 141/296 (47%), Gaps = 14/296 (4%)

Query: 77  SFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEA 136
           +FN+L     +N   D VI    +++  G +PD +T   +IN       G C E  + EA
Sbjct: 330 TFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVIN-------GFCKEGLVDEA 382

Query: 137 TWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSY 196
             L KNM A G +P+ I+Y  ++ G CR      A  L   M+    + G +   N  ++
Sbjct: 383 VMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMI----QQGCLP--NPVTF 436

Query: 197 SIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLD 256
           + +I+ +CK+GL ++A EL  +M   G +P ++  +T+I G   AG  EE   L   M++
Sbjct: 437 NTLINFMCKKGLAEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMIN 496

Query: 257 LGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDT 316
            G  PN + ++ M   L + G+ ++   + + +    +  D   YN+++   C     D 
Sbjct: 497 KGITPNTIIYSSMASALSREGRTDKIIQMFDSIQDATVRSDAALYNAVISSLCKRWETDR 556

Query: 317 AREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIIS-NGVRQTVITY 371
           A + F  M S GC     +Y ILI G      V EA  L  ++ S   VR+ ++ +
Sbjct: 557 AIDFFAYMVSNGCMPNESTYTILIRGLASEGLVREAQDLLSELCSRRAVRKHLVRH 612



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 63/246 (25%), Positives = 107/246 (43%), Gaps = 19/246 (7%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CK G+++  EA      M+     P   S+ ++   + +   +         ++  G LP
Sbjct: 374 CKEGLVD--EAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLP 431

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           + +T N LIN        +C +   ++A  L K M+  G  PD+I+Y T+I+G  + G  
Sbjct: 432 NPVTFNTLIN-------FMCKKGLAEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKT 484

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
             AL L   M++     G+   T I  YS +  +L +EG  DK  ++F  ++   +    
Sbjct: 485 EEALELLNVMIN----KGITPNTII--YSSMASALSREGRTDKIIQMFDSIQDATVRSDA 538

Query: 229 VVCTTLIHGFCCAGNWEEVNGL--FIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLL 286
            +   +I   C    WE    +  F  M+  G  PN  T+ ++I  L   G + EA  LL
Sbjct: 539 ALYNAVISSLC--KRWETDRAIDFFAYMVSNGCMPNESTYTILIRGLASEGLVREAQDLL 596

Query: 287 ELMIQR 292
             +  R
Sbjct: 597 SELCSR 602


>gi|226493231|ref|NP_001140656.1| hypothetical protein [Zea mays]
 gi|194700420|gb|ACF84294.1| unknown [Zea mays]
 gi|414587025|tpg|DAA37596.1| TPA: hypothetical protein ZEAMMB73_567962 [Zea mays]
          Length = 598

 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 125/409 (30%), Positives = 208/409 (50%), Gaps = 7/409 (1%)

Query: 126 GLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYEN 185
            LC   R+ +A  +   M+  G  PDV+TY  L+   C+      AL L       D+  
Sbjct: 172 ALCERGRVADALVVLDGMLCRGCAPDVVTYNILLQAACKGRGYRQALELI------DFMR 225

Query: 186 GLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWE 245
               + N  +Y++IID++C+EG VD+A+EL   +  RG  P  V   T++ GFC    W 
Sbjct: 226 AEGCEPNNVTYNVIIDAMCREGDVDQARELLNSLPSRGCKPNTVNYNTVLKGFCSIERWV 285

Query: 246 EVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLM 305
           + + +  EM+     PN  T NV+I+ LC+ G + +    LE M + G   +  TYN+++
Sbjct: 286 DADEILDEMVRENCPPNEATLNVIINTLCRKGLLQKVTLYLEKMSKHGCTANVVTYNAVI 345

Query: 306 DGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVR 365
            G C  G +D+A E+  +M S GCK  +V+YN ++ G C     E+A  L  ++  N   
Sbjct: 346 SGMCEQGNVDSALELLSNMQSFGCKPDIVTYNTVLKGLCSADRWEDAEELMIKMSQNDRL 405

Query: 366 QTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKL 425
               T+NT++S   Q G    A ++F +M      P+ +TY+ +I GL K   +++A++L
Sbjct: 406 PDNSTFNTIISFWCQKGLILQAFEVFKQMPEKGCNPNSTTYSTIIGGLTKAGKMEQALEL 465

Query: 426 FHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCR 485
            + +    F    +++  L + L K  +++   ++ HKL   G+ P  V Y+ ++ GLCR
Sbjct: 466 LNEMANKGFNTD-KMYRVLTESLNKEDKIEEVVQVVHKLQDSGISPQTVLYNTVLLGLCR 524

Query: 486 KGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKM 534
            GK + A D L  M   GC P+  T+  L+ G      + +  ELL ++
Sbjct: 525 NGKTDYAIDVLADMVSCGCMPDESTYIILIEGLFYEGYSKEARELLSRL 573



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 131/482 (27%), Positives = 227/482 (47%), Gaps = 52/482 (10%)

Query: 108 PDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGN 167
           PD    N L+       R LC   R  +A  + +   A G      TYG L++G+CR G 
Sbjct: 94  PDVPLANRLV-------RDLCRRGRPADAARVVE---ACGPEATAATYGALVDGYCRAGL 143

Query: 168 LSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPA 227
           L  A R+   M +       +  ++ ++++ +I +LC+ G V  A  +   M  RG  P 
Sbjct: 144 LEDARRVVGGMPAH------VQASSAYAHNPLIHALCERGRVADALVVLDGMLCRGCAPD 197

Query: 228 VVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLE 287
           VV    L+   C    + +   L   M   G  PN +T+NV+ID +C+ G +++A  LL 
Sbjct: 198 VVTYNILLQAACKGRGYRQALELIDFMRAEGCEPNNVTYNVIIDAMCREGDVDQARELLN 257

Query: 288 LMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKIL 347
            +  RG  P+   YN+++ G+C + R   A EI   M  + C     + N++IN  C+  
Sbjct: 258 SLPSRGCKPNTVNYNTVLKGFCSIERWVDADEILDEMVRENCPPNEATLNVIINTLCRKG 317

Query: 348 NVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYN 407
            +++      ++  +G    V+TYN ++SG+ + G    A +L   M+ +  +PD+ TYN
Sbjct: 318 LLQKVTLYLEKMSKHGCTANVVTYNAVISGMCEQGNVDSALELLSNMQSFGCKPDIVTYN 377

Query: 408 ILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQK 467
            ++ GLC  +  ++A +L   +  N        FN +I   C+ G +  A+E+F ++P+K
Sbjct: 378 TVLKGLCSADRWEDAEELMIKMSQNDRLPDNSTFNTIISFWCQKGLILQAFEVFKQMPEK 437

Query: 468 GLVPTVVTYSIMIHGLCRKGKLEKANDFLLYM---------------------------- 499
           G  P   TYS +I GL + GK+E+A + L  M                            
Sbjct: 438 GCNPNSTTYSTIIGGLTKAGKMEQALELLNEMANKGFNTDKMYRVLTESLNKEDKIEEVV 497

Query: 500 ------EKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
                 + +G +P  V +NT++ G  +N KT   +++L  M       +PD++T+ I+++
Sbjct: 498 QVVHKLQDSGISPQTVLYNTVLLGLCRNGKTDYAIDVLADMVSC--GCMPDESTYIILIE 555

Query: 554 LL 555
            L
Sbjct: 556 GL 557



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 110/414 (26%), Positives = 199/414 (48%), Gaps = 12/414 (2%)

Query: 150 PDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLV 209
           PDV     L+   CR G  + A R+ +             +    +Y  ++D  C+ GL+
Sbjct: 94  PDVPLANRLVRDLCRRGRPADAARVVE---------ACGPEATAATYGALVDGYCRAGLL 144

Query: 210 DKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVM 269
           + A+ +   M       +      LIH  C  G   +   +   ML  G  P+++T+N++
Sbjct: 145 EDARRVVGGMPAHVQASSAYAHNPLIHALCERGRVADALVVLDGMLCRGCAPDVVTYNIL 204

Query: 270 IDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGC 329
           +   CKG    +A  L++ M   G  P+  TYN ++D  C  G +D ARE+  S+ S+GC
Sbjct: 205 LQAACKGRGYRQALELIDFMRAEGCEPNNVTYNVIIDAMCREGDVDQARELLNSLPSRGC 264

Query: 330 KHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQK 389
           K   V+YN ++ G+C I    +A  +  +++         T N +++ L + G       
Sbjct: 265 KPNTVNYNTVLKGFCSIERWVDADEILDEMVRENCPPNEATLNVIINTLCRKGLLQKVTL 324

Query: 390 LFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLC 449
             ++M  +    ++ TYN +I G+C+   V  A++L   ++    +  I  +N ++ GLC
Sbjct: 325 YLEKMSKHGCTANVVTYNAVISGMCEQGNVDSALELLSNMQSFGCKPDIVTYNTVLKGLC 384

Query: 450 KAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVV 509
            A R ++A EL  K+ Q   +P   T++ +I   C+KG + +A +    M + GC PN  
Sbjct: 385 SADRWEDAEELMIKMSQNDRLPDNSTFNTIISFWCQKGLILQAFEVFKQMPEKGCNPNST 444

Query: 510 TFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
           T++T++ G  +  K  + +ELL++MA    N    D  + ++ + L K++K  E
Sbjct: 445 TYSTIIGGLTKAGKMEQALELLNEMANKGFNT---DKMYRVLTESLNKEDKIEE 495



 Score =  161 bits (408), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 111/417 (26%), Positives = 192/417 (46%), Gaps = 39/417 (9%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
           N  +H  C+ G   + +A      M     +P + ++N+L  A  K R Y   +     +
Sbjct: 167 NPLIHALCERG--RVADALVVLDGMLCRGCAPDVVTYNILLQAACKGRGYRQALELIDFM 224

Query: 102 VSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLING 161
            + G  P+ +T N++I+        +C E  + +A  L  ++ + G +P+ + Y T++ G
Sbjct: 225 RAEGCEPNNVTYNVIID-------AMCREGDVDQARELLNSLPSRGCKPNTVNYNTVLKG 277

Query: 162 FCRTGNLSVALRLHKKMVSGD---------------YENGLISK--------------TN 192
           FC       A  +  +MV  +                  GL+ K               N
Sbjct: 278 FCSIERWVDADEILDEMVRENCPPNEATLNVIINTLCRKGLLQKVTLYLEKMSKHGCTAN 337

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
           + +Y+ +I  +C++G VD A EL   M+  G  P +V   T++ G C A  WE+   L I
Sbjct: 338 VVTYNAVISGMCEQGNVDSALELLSNMQSFGCKPDIVTYNTVLKGLCSADRWEDAEELMI 397

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
           +M      P+  TFN +I   C+ G I +A  + + M ++G NP+  TY++++ G    G
Sbjct: 398 KMSQNDRLPDNSTFNTIISFWCQKGLILQAFEVFKQMPEKGCNPNSTTYSTIIGGLTKAG 457

Query: 313 RIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYN 372
           +++ A E+   M +KG  +T   Y +L     K   +EE + +  ++  +G+    + YN
Sbjct: 458 KMEQALELLNEMANKGF-NTDKMYRVLTESLNKEDKIEEVVQVVHKLQDSGISPQTVLYN 516

Query: 373 TLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHML 429
           T+L GL + G+  YA  +  +M      PD STY ILI+GL      +EA +L   L
Sbjct: 517 TVLLGLCRNGKTDYAIDVLADMVSCGCMPDESTYIILIEGLFYEGYSKEARELLSRL 573



 Score = 99.0 bits (245), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 84/348 (24%), Positives = 137/348 (39%), Gaps = 64/348 (18%)

Query: 41  LNEFLHENCKSGIINLN-------------EARYFFGYMTHMQPSPPISSFNLLFGAVAK 87
           LN      CK   +N N             +A      M      P  ++ N++   + +
Sbjct: 256 LNSLPSRGCKPNTVNYNTVLKGFCSIERWVDADEILDEMVRENCPPNEATLNVIINTLCR 315

Query: 88  NRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFG 147
                 V  +  K+   G   + +T N +I+       G+C +  +  A  L  NM +FG
Sbjct: 316 KGLLQKVTLYLEKMSKHGCTANVVTYNAVIS-------GMCEQGNVDSALELLSNMQSFG 368

Query: 148 VRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEG 207
            +PD++TY T++ G C       A  L  KM   D         +  +++ II   C++G
Sbjct: 369 CKPDIVTYNTVLKGLCSADRWEDAEELMIKMSQND------RLPDNSTFNTIISFWCQKG 422

Query: 208 LVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEML------------ 255
           L+ +A E+F +M  +G NP     +T+I G   AG  E+   L  EM             
Sbjct: 423 LILQAFEVFKQMPEKGCNPNSTTYSTIIGGLTKAGKMEQALELLNEMANKGFNTDKMYRV 482

Query: 256 ----------------------DLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRG 293
                                 D G  P  + +N ++  LC+ GK + A  +L  M+  G
Sbjct: 483 LTESLNKEDKIEEVVQVVHKLQDSGISPQTVLYNTVLLGLCRNGKTDYAIDVLADMVSCG 542

Query: 294 LNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILIN 341
             PD  TY  L++G    G    ARE+     S+ C   V+S +++ N
Sbjct: 543 CMPDESTYIILIEGLFYEGYSKEARELL----SRLCSRDVLSNSLIKN 586


>gi|125539409|gb|EAY85804.1| hypothetical protein OsI_07165 [Oryza sativa Indica Group]
          Length = 649

 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 140/496 (28%), Positives = 238/496 (47%), Gaps = 70/496 (14%)

Query: 126 GLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKM-VSGD-Y 183
           G C + R+ +A  +     A G   +V+TY  LI+G+CR+G L  ALRL   M V+ D Y
Sbjct: 133 GYCRDGRLADAERVLGAARATGA-ANVVTYTALIDGYCRSGRLDDALRLIASMPVAPDTY 191

Query: 184 ENGLISK------------------------TNIFSYSIIIDSLCKEGLVDKAKELFLEM 219
               + K                         N  +++  I S C+ GL+D+A +L  +M
Sbjct: 192 TYNTVLKGLCIAKKWEEAEELMAEMIRNRCPPNEVTFATQIRSFCQNGLLDRAVQLLDQM 251

Query: 220 KGRGINPAVVVCTTLIHGF--------------------------------CCAGNWEEV 247
              G  P VV+ +TLI+GF                                C A  WE++
Sbjct: 252 PRYGCTPDVVIYSTLINGFSEQGHVDQALDLLNTMLCKPNTVCYNAALKGLCIAERWEDI 311

Query: 248 NGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDG 307
             L  EM+  G  PN  TF+++I  LC+   ++ A  +LE M + G  PD   YN +++ 
Sbjct: 312 GELMAEMVRKGCSPNEATFSMLISSLCQNNLVDSAVEVLEQMEKYGCEPDTVNYNIIINS 371

Query: 308 YCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQT 367
               GR+D A  +  SM    CK   + +N ++ G+C+     +A  L  Q+  +     
Sbjct: 372 LSERGRVDDALRLLNSMV---CKPDALGFNAVLKGFCRAERWHDASELIAQMFRDDCPLI 428

Query: 368 VITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFH 427
            +T+N L+  L Q G   YA ++F++M  Y   PD+ TY+ L++G  +   V+ A++LF 
Sbjct: 429 EMTFNILIDTLCQNGLVNYATQVFEQMPRYRCTPDIVTYSSLLNGFSEQGLVEVAIQLFR 488

Query: 428 MLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKG 487
            +      F    +N ++ GLC+A R ++A EL  ++  K   P  VT++I+I+ LC+KG
Sbjct: 489 SMPCKPDIFS---YNAVLKGLCRAARWEDAGELIAEMVGKDCPPNEVTFNILINSLCQKG 545

Query: 488 KLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTT 547
            +++A + L  M   G  P++ T+N L++GF +  +    ++LL  M+       PD  +
Sbjct: 546 LVDRAIEVLEQMPNYGSTPDIFTYNALINGFSEQGRLDDALKLLSTMS-----CKPDAIS 600

Query: 548 FSIVVDLLAKDEKYHE 563
           ++  +  L + E++ +
Sbjct: 601 YNSTLKGLCRAERWQD 616



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 94/332 (28%), Positives = 159/332 (47%), Gaps = 51/332 (15%)

Query: 72  SPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVEN 131
           SP  ++F++L  ++ +N   D+ +    ++   G  PD +  NI+IN     ERG     
Sbjct: 324 SPNEATFSMLISSLCQNNLVDSAVEVLEQMEKYGCEPDTVNYNIIINSLS--ERG----- 376

Query: 132 RIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKT 191
           R+ +A  L  +M+    +PD + +  ++ GFCR      A  L  +M   D    LI  T
Sbjct: 377 RVDDALRLLNSMV---CKPDALGFNAVLKGFCRAERWHDASELIAQMFRDDCP--LIEMT 431

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGF------------- 238
               ++I+ID+LC+ GLV+ A ++F +M      P +V  ++L++GF             
Sbjct: 432 ----FNILIDTLCQNGLVNYATQVFEQMPRYRCTPDIVTYSSLLNGFSEQGLVEVAIQLF 487

Query: 239 -------------------CCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKI 279
                              C A  WE+   L  EM+     PN +TFN++I+ LC+ G +
Sbjct: 488 RSMPCKPDIFSYNAVLKGLCRAARWEDAGELIAEMVGKDCPPNEVTFNILINSLCQKGLV 547

Query: 280 NEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNIL 339
           + A  +LE M   G  PD FTYN+L++G+   GR+D A ++  +M    CK   +SYN  
Sbjct: 548 DRAIEVLEQMPNYGSTPDIFTYNALINGFSEQGRLDDALKLLSTM---SCKPDAISYNST 604

Query: 340 INGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
           + G C+    ++A  L  +++ N      +T+
Sbjct: 605 LKGLCRAERWQDAEELVAEMLRNKCTPNEVTF 636



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 90/345 (26%), Positives = 158/345 (45%), Gaps = 13/345 (3%)

Query: 229 VVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLEL 288
           + C  LI   C  G   +   +   +       + ++ N ++   C+ G++ +A  +L  
Sbjct: 91  ISCNILIKKLCATGRLADAERVLDALKAAAAA-DAVSHNTLVAGYCRDGRLADAERVLGA 149

Query: 289 MIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILN 348
               G   +  TY +L+DGYC  GR+D A  +  SM      +T   YN ++ G C    
Sbjct: 150 ARATGA-ANVVTYTALIDGYCRSGRLDDALRLIASMPVAPDTYT---YNTVLKGLCIAKK 205

Query: 349 VEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNI 408
            EEA  L  ++I N      +T+ T +    Q G    A +L D+M  Y   PD+  Y+ 
Sbjct: 206 WEEAEELMAEMIRNRCPPNEVTFATQIRSFCQNGLLDRAVQLLDQMPRYGCTPDVVIYST 265

Query: 409 LIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKG 468
           LI+G  +   V +A+ L + +           +N  + GLC A R ++  EL  ++ +KG
Sbjct: 266 LINGFSEQGHVDQALDLLNTMLCKP---NTVCYNAALKGLCIAERWEDIGELMAEMVRKG 322

Query: 469 LVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVV 528
             P   T+S++I  LC+   ++ A + L  MEK GC P+ V +N +++   +  +    +
Sbjct: 323 CSPNEATFSMLISSLCQNNLVDSAVEVLEQMEKYGCEPDTVNYNIIINSLSERGRVDDAL 382

Query: 529 ELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKSSYR 573
            LL+ M        PD   F+ V+    + E++H+ S +    +R
Sbjct: 383 RLLNSMV-----CKPDALGFNAVLKGFCRAERWHDASELIAQMFR 422


>gi|229914885|gb|ACQ90610.1| putative PPR repeat protein [Eutrema halophilum]
          Length = 1023

 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 135/461 (29%), Positives = 235/461 (50%), Gaps = 23/461 (4%)

Query: 37  PETQ-LNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVI 95
           P+T+  N  LH+  + G    +  + FF  M      P + ++N++   + K    +A  
Sbjct: 96  PKTRSCNGLLHKFARLG--KTDGMKRFFKDMIGAGSKPTVFTYNIMIDCMCKEGDIEAAS 153

Query: 96  SFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITY 155
             + ++   GL+PD +T N +I+ +G          R+ +  + F+ M +    PDVITY
Sbjct: 154 GLFEEMKFRGLIPDTVTYNSMIDGYGKV-------GRLDDTVYFFEEMKSMSCEPDVITY 206

Query: 156 GTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKEL 215
            TLIN FC+ G L   L   ++M     ++GL  K N+ SYS ++D+ CKE ++ +A + 
Sbjct: 207 NTLINCFCKFGKLPKGLEFFREM----KQSGL--KPNVVSYSTLVDAFCKEDMMQQALKF 260

Query: 216 FLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCK 275
           +++M+  G+ P     T+L+  +C  GN  +   L  EM  +G   N++T+  +ID LC 
Sbjct: 261 YVDMRRLGLVPNEHTYTSLVDAYCKIGNLSDAFRLADEMSQVGVEWNVVTYTALIDGLCD 320

Query: 276 GGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVS 335
             +I EA  L   M+  G+ P+  +Y +L+ G+     +D A E+   M  +G K  ++ 
Sbjct: 321 VERIKEAEELFGKMVTAGVIPNLASYTALIHGFVKAKNMDRALELLDEMKGRGIKPDLLL 380

Query: 336 YNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMK 395
           Y   I   C +  +E A  +  ++   G++     Y TL+   F++        L +EM 
Sbjct: 381 YGTFIWSLCGLEKIEAAKVVMNEMQEKGIKANTFIYTTLMDAYFKSENPSEGLHLLEEML 440

Query: 396 LYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIE----IFNCLIDGLCKA 451
             ++E    T+ +LIDGLCKN  V +A+  F  +  +   FG++    I+  +IDGLCK 
Sbjct: 441 ELDIEVTAVTFCVLIDGLCKNKLVSKAIDYFGRISND---FGLQANAAIYTAMIDGLCKE 497

Query: 452 GRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKA 492
            +++ A  LF ++ QKGLVP    Y+ +I G  ++G + +A
Sbjct: 498 DQVEAATTLFEQMAQKGLVPDRTAYTSLIDGKLKQGNVVQA 538



 Score =  208 bits (530), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 108/364 (29%), Positives = 192/364 (52%), Gaps = 2/364 (0%)

Query: 196 YSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEML 255
           +  +   L +E + ++A + F +MK   + P    C  L+H F   G  + +   F +M+
Sbjct: 66  FDALFSVLIEEDMFEEALQCFSKMKRCRVFPKTRSCNGLLHKFARLGKTDGMKRFFKDMI 125

Query: 256 DLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRID 315
             G +P + T+N+MIDC+CK G I  A+GL E M  RGL PD  TYNS++DGY  VGR+D
Sbjct: 126 GAGSKPTVFTYNIMIDCMCKEGDIEAASGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRLD 185

Query: 316 TAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLL 375
                F  M S  C+  V++YN LIN +CK   + + +  +R++  +G++  V++Y+TL+
Sbjct: 186 DTVYFFEEMKSMSCEPDVITYNTLINCFCKFGKLPKGLEFFREMKQSGLKPNVVSYSTLV 245

Query: 376 SGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFE 435
               +      A K + +M+   + P+  TY  L+D  CK   + +A +L   +     E
Sbjct: 246 DAFCKEDMMQQALKFYVDMRRLGLVPNEHTYTSLVDAYCKIGNLSDAFRLADEMSQVGVE 305

Query: 436 FGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDF 495
           + +  +  LIDGLC   R+  A ELF K+   G++P + +Y+ +IHG  +   +++A + 
Sbjct: 306 WNVVTYTALIDGLCDVERIKEAEELFGKMVTAGVIPNLASYTALIHGFVKAKNMDRALEL 365

Query: 496 LLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLL 555
           L  M+  G  P+++ + T +       K      ++++M   E+ +  +   ++ ++D  
Sbjct: 366 LDEMKGRGIKPDLLLYGTFIWSLCGLEKIEAAKVVMNEMQ--EKGIKANTFIYTTLMDAY 423

Query: 556 AKDE 559
            K E
Sbjct: 424 FKSE 427



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 123/463 (26%), Positives = 216/463 (46%), Gaps = 44/463 (9%)

Query: 127 LCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENG 186
           L  E+  +EA   F  M    V P   +   L++ F R G      R  K M+      G
Sbjct: 73  LIEEDMFEEALQCFSKMKRCRVFPKTRSCNGLLHKFARLGKTDGMKRFFKDMI------G 126

Query: 187 LISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEE 246
             SK  +F+Y+I+ID +CKEG ++ A  LF EMK RG+ P  V   ++I G+   G  ++
Sbjct: 127 AGSKPTVFTYNIMIDCMCKEGDIEAASGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRLDD 186

Query: 247 VNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMD 306
               F EM  +   P+++T+N +I+C CK GK+ +       M Q GL P+  +Y++L+D
Sbjct: 187 TVYFFEEMKSMSCEPDVITYNTLINCFCKFGKLPKGLEFFREMKQSGLKPNVVSYSTLVD 246

Query: 307 GYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQ 366
            +C    +  A + ++ M   G      +Y  L++ YCKI N+ +A  L  ++   GV  
Sbjct: 247 AFCKEDMMQQALKFYVDMRRLGLVPNEHTYTSLVDAYCKIGNLSDAFRLADEMSQVGVEW 306

Query: 367 TVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLF 426
            V+TY  L+ GL    +   A++LF +M    V P+L++Y  LI G  K   +  A++L 
Sbjct: 307 NVVTYTALIDGLCDVERIKEAEELFGKMVTAGVIPNLASYTALIHGFVKAKNMDRALELL 366

Query: 427 HMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVP--------------- 471
             ++    +  + ++   I  LC   +++ A  + +++ +KG+                 
Sbjct: 367 DEMKGRGIKPDLLLYGTFIWSLCGLEKIEAAKVVMNEMQEKGIKANTFIYTTLMDAYFKS 426

Query: 472 --------------------TVVTYSIMIHGLCRKGKLEKANDFLLYMEKN-GCAPNVVT 510
                               T VT+ ++I GLC+   + KA D+   +  + G   N   
Sbjct: 427 ENPSEGLHLLEEMLELDIEVTAVTFCVLIDGLCKNKLVSKAIDYFGRISNDFGLQANAAI 486

Query: 511 FNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
           +  ++ G  + ++      L  +MA  ++ LVPD T ++ ++D
Sbjct: 487 YTAMIDGLCKEDQVEAATTLFEQMA--QKGLVPDRTAYTSLID 527



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 103/381 (27%), Positives = 168/381 (44%), Gaps = 49/381 (12%)

Query: 56  LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNI 115
           L++  YFF  M  M   P + ++N L     K       + F+R++   GL P+ ++ + 
Sbjct: 184 LDDTVYFFEEMKSMSCEPDVITYNTLINCFCKFGKLPKGLEFFREMKQSGLKPNVVSYST 243

Query: 116 LINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLH 175
           L++ F       C E+ +++A   + +M   G+ P+  TY +L++ +C+ GNLS A RL 
Sbjct: 244 LVDAF-------CKEDMMQQALKFYVDMRRLGLVPNEHTYTSLVDAYCKIGNLSDAFRLA 296

Query: 176 KKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLI 235
            +M     E       N+ +Y+ +ID LC    + +A+ELF +M   G+ P +   T LI
Sbjct: 297 DEMSQVGVE------WNVVTYTALIDGLCDVERIKEAEELFGKMVTAGVIPNLASYTALI 350

Query: 236 HGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLN 295
           HGF  A N +    L  EM   G +P+LL +   I  LC   KI  A  ++  M ++G+ 
Sbjct: 351 HGFVKAKNMDRALELLDEMKGRGIKPDLLLYGTFIWSLCGLEKIEAAKVVMNEMQEKGIK 410

Query: 296 PDRFTYNSLMDGY-----------------------------------CLVGRIDTAREI 320
            + F Y +LMD Y                                   C    +  A + 
Sbjct: 411 ANTFIYTTLMDAYFKSENPSEGLHLLEEMLELDIEVTAVTFCVLIDGLCKNKLVSKAIDY 470

Query: 321 FLSMHSK-GCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLF 379
           F  + +  G +     Y  +I+G CK   VE A +L+ Q+   G+      Y +L+ G  
Sbjct: 471 FGRISNDFGLQANAAIYTAMIDGLCKEDQVEAATTLFEQMAQKGLVPDRTAYTSLIDGKL 530

Query: 380 QAGQAGYAQKLFDEMKLYNVE 400
           + G    A  L D+M    VE
Sbjct: 531 KQGNVVQALALRDKMAEIGVE 551



 Score =  132 bits (331), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 84/319 (26%), Positives = 143/319 (44%), Gaps = 37/319 (11%)

Query: 261 PNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREI 320
           P    F+ +   L +     EA      M +  + P   + N L+  +  +G+ D  +  
Sbjct: 61  PGFGVFDALFSVLIEEDMFEEALQCFSKMKRCRVFPKTRSCNGLLHKFARLGKTDGMKRF 120

Query: 321 FLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQ 380
           F  M   G K TV +YNI+I+  CK  ++E A  L+ ++   G+    +TYN+++ G  +
Sbjct: 121 FKDMIGAGSKPTVFTYNIMIDCMCKEGDIEAASGLFEEMKFRGLIPDTVTYNSMIDGYGK 180

Query: 381 AGQAGYAQKLFDEMKLYNVEPDLSTYNILI------------------------------ 410
            G+       F+EMK  + EPD+ TYN LI                              
Sbjct: 181 VGRLDDTVYFFEEMKSMSCEPDVITYNTLINCFCKFGKLPKGLEFFREMKQSGLKPNVVS 240

Query: 411 -----DGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLP 465
                D  CK + +Q+A+K +  +           +  L+D  CK G L +A+ L  ++ 
Sbjct: 241 YSTLVDAFCKEDMMQQALKFYVDMRRLGLVPNEHTYTSLVDAYCKIGNLSDAFRLADEMS 300

Query: 466 QKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTS 525
           Q G+   VVTY+ +I GLC   ++++A +    M   G  PN+ ++  L+HGF++     
Sbjct: 301 QVGVEWNVVTYTALIDGLCDVERIKEAEELFGKMVTAGVIPNLASYTALIHGFVKAKNMD 360

Query: 526 KVVELLHKMAEPERNLVPD 544
           + +ELL +M    R + PD
Sbjct: 361 RALELLDEMK--GRGIKPD 377



 Score = 52.4 bits (124), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 33/111 (29%), Positives = 56/111 (50%), Gaps = 8/111 (7%)

Query: 77  SFNLLFGAVAKNRHYDAVISFYRKLVS-IGLLPDFLTLNILINCFGNKERGLCVENRIKE 135
           +F +L   + KN+     I ++ ++ +  GL  +      +I+       GLC E++++ 
Sbjct: 450 TFCVLIDGLCKNKLVSKAIDYFGRISNDFGLQANAAIYTAMID-------GLCKEDQVEA 502

Query: 136 ATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENG 186
           AT LF+ M   G+ PD   Y +LI+G  + GN+  AL L  KM     E+G
Sbjct: 503 ATTLFEQMAQKGLVPDRTAYTSLIDGKLKQGNVVQALALRDKMAEIGVESG 553


>gi|302816541|ref|XP_002989949.1| hypothetical protein SELMODRAFT_130917 [Selaginella moellendorffii]
 gi|300142260|gb|EFJ08962.1| hypothetical protein SELMODRAFT_130917 [Selaginella moellendorffii]
          Length = 447

 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 147/457 (32%), Positives = 223/457 (48%), Gaps = 24/457 (5%)

Query: 135 EATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIF 194
           +A  LFK ++A    P+  TY  LI GFC+ G +  A+ +   M S    +GL+   N  
Sbjct: 8   QALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKS----SGLLP--NAS 61

Query: 195 SYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEM 254
           + + ++  LC+ G +  A +LF EM+     P       L+ GF  AG   E    F EM
Sbjct: 62  TMNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRAIE---FFKEM 118

Query: 255 LDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRI 314
              G  P+L ++++++  L   G++ EA+ L   M     +PD  TYN LMDGYC +G+ 
Sbjct: 119 KASGVEPDLESYHILLSALSDSGRMAEAHALFSAMT---CSPDIMTYNVLMDGYCKIGQT 175

Query: 315 DTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTL 374
             A+ +   +   G +  V +Y+I+IN YCK+  VEEA  ++ ++I +      +T+NTL
Sbjct: 176 YEAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTL 235

Query: 375 LSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNN-CVQEAVKLFHMLEMNK 433
           ++G  +AG    A KLF EM+    +  + TYN LID LCK    V  AV LF+ LE   
Sbjct: 236 IAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAG 295

Query: 434 FEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKAN 493
               I  +N LI G  +  R ++   L   +  +G  P V+TY+ +I GLC   ++E A 
Sbjct: 296 LTPTIVTYNSLIQGFSE--RANDGLRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQ 353

Query: 494 DFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
                M    CAPNV TFN L+ G     K  +   +L +M        PD TTF+ ++ 
Sbjct: 354 RLFNGM---ACAPNVTTFNFLIRGLCAQKKVEEARNILDRMT------APDMTTFNTIIL 404

Query: 554 LLAKDEKYHECSAVSKSSYRACLYVTIFQPSSLGSMI 590
              K    H+   V K   +   Y   +   +L   I
Sbjct: 405 AFCKAGAMHDAREVMKDMLKHGFYPNTYTTYALAHGI 441



 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 130/447 (29%), Positives = 235/447 (52%), Gaps = 29/447 (6%)

Query: 89  RHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGV 148
           R +D  +  ++++++    P+  T N+LI       RG C   ++ +A  +F +M + G+
Sbjct: 4   RKHDQALRLFKEVLAGLFAPNAHTYNVLI-------RGFCKGGQMHQAVSVFSDMKSSGL 56

Query: 149 RPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGL 208
            P+  T  TL+ G C  G +S AL+L ++M +G +           S++I++      G 
Sbjct: 57  LPNASTMNTLLLGLCEIGQMSSALKLFREMQAGPF------LPTSASHNILLRGFFMAG- 109

Query: 209 VDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNV 268
             +A E F EMK  G+ P +     L+     +G   E + LF  M      P+++T+NV
Sbjct: 110 --RAIEFFKEMKASGVEPDLESYHILLSALSDSGRMAEAHALFSAMT---CSPDIMTYNV 164

Query: 269 MIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKG 328
           ++D  CK G+  EA  L++ +++ G  P+ FTY+ +++ YC + +++ A E+F+ M    
Sbjct: 165 LMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESN 224

Query: 329 CKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGY-A 387
           C    V++N LI G+CK   +E+A+ L+ ++   G + T++TYNTL+  L +     Y A
Sbjct: 225 CVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTA 284

Query: 388 QKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDG 447
             LF++++   + P + TYN LI G  +     + ++L   +     +  +  +NCLI G
Sbjct: 285 VDLFNKLEGAGLTPTIVTYNSLIQGFSER--ANDGLRLLCHMHAEGCKPDVITYNCLISG 342

Query: 448 LCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPN 507
           LC A R+++A  LF+ +      P V T++ +I GLC + K+E+A + L  M     AP+
Sbjct: 343 LCSANRVEDAQRLFNGM---ACAPNVTTFNFLIRGLCAQKKVEEARNILDRMT----APD 395

Query: 508 VVTFNTLMHGFLQNNKTSKVVELLHKM 534
           + TFNT++  F +        E++  M
Sbjct: 396 MTTFNTIILAFCKAGAMHDAREVMKDM 422



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 125/414 (30%), Positives = 192/414 (46%), Gaps = 48/414 (11%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CK G   +++A   F  M      P  S+ N L   + +     + +  +R++ +   LP
Sbjct: 36  CKGG--QMHQAVSVFSDMKSSGLLPNASTMNTLLLGLCEIGQMSSALKLFREMQAGPFLP 93

Query: 109 DFLTLNILINCFGNKER-------------------------GLCVENRIKEATWLFKNM 143
              + NIL+  F    R                          L    R+ EA  LF  M
Sbjct: 94  TSASHNILLRGFFMAGRAIEFFKEMKASGVEPDLESYHILLSALSDSGRMAEAHALFSAM 153

Query: 144 IAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSL 203
                 PD++TY  L++G+C+ G    A  L K+++   YE       N+F+YSIII+  
Sbjct: 154 T---CSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGYE------PNVFTYSIIINCY 204

Query: 204 CKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNL 263
           CK   V++A E+F++M      P  V   TLI GFC AG  E+   LF EM  +G +  +
Sbjct: 205 CKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATI 264

Query: 264 LTFNVMIDCLCKG-GKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFL 322
           +T+N +ID LCK  G +  A  L   +   GL P   TYNSL+ G+    R +    +  
Sbjct: 265 VTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFS--ERANDGLRLLC 322

Query: 323 SMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAG 382
            MH++GCK  V++YN LI+G C    VE+A  L+  +        V T+N L+ GL    
Sbjct: 323 HMHAEGCKPDVITYNCLISGLCSANRVEDAQRLFNGM---ACAPNVTTFNFLIRGLCAQK 379

Query: 383 QAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEF 436
           +   A+ + D M      PD++T+N +I   CK   + +A ++  M +M K  F
Sbjct: 380 KVEEARNILDRM----TAPDMTTFNTIILAFCKAGAMHDAREV--MKDMLKHGF 427



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 93/327 (28%), Positives = 158/327 (48%), Gaps = 32/327 (9%)

Query: 56  LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNI 115
           + EA   F  MT    SP I ++N+L     K        S  ++++  G  P+  T +I
Sbjct: 143 MAEAHALFSAMT---CSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSI 199

Query: 116 LINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLH 175
           +INC+       C  ++++EA  +F  MI     P+ +T+ TLI GFC+ G L  A++L 
Sbjct: 200 IINCY-------CKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLF 252

Query: 176 KKMVSGDYENGLISKTNIFSYSIIIDSLCKE-GLVDKAKELFLEMKGRGINPAVVVCTTL 234
            +M        +  K  I +Y+ +IDSLCK+ G V  A +LF +++G G+ P +V   +L
Sbjct: 253 AEM------EKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSL 306

Query: 235 IHGFCCAGNWEEVNG---LFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQ 291
           I GF      E  N    L   M   G +P+++T+N +I  LC   ++ +A  L   M  
Sbjct: 307 IQGFS-----ERANDGLRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQRLFNGM-- 359

Query: 292 RGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEE 351
               P+  T+N L+ G C   +++ AR I   M +      + ++N +I  +CK   + +
Sbjct: 360 -ACAPNVTTFNFLIRGLCAQKKVEEARNILDRMTAP----DMTTFNTIILAFCKAGAMHD 414

Query: 352 AMSLYRQIISNGVRQTVITYNTLLSGL 378
           A  + + ++ +G      T   L  G+
Sbjct: 415 AREVMKDMLKHGFYPNTYTTYALAHGI 441



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 60/218 (27%), Positives = 112/218 (51%), Gaps = 8/218 (3%)

Query: 350 EEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNIL 409
           ++A+ L++++++        TYN L+ G  + GQ   A  +F +MK   + P+ ST N L
Sbjct: 7   DQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMNTL 66

Query: 410 IDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGL 469
           + GLC+   +  A+KLF  ++   F       N L+ G   AGR   A E F ++   G+
Sbjct: 67  LLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGR---AIEFFKEMKASGV 123

Query: 470 VPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVE 529
            P + +Y I++  L   G++ +A+     M    C+P+++T+N LM G+ +  +T +   
Sbjct: 124 EPDLESYHILLSALSDSGRMAEAHALFSAMT---CSPDIMTYNVLMDGYCKIGQTYEAQS 180

Query: 530 LLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAV 567
           L+ ++ +      P+  T+SI+++   K +K  E   V
Sbjct: 181 LMKEILKA--GYEPNVFTYSIIINCYCKLDKVEEAWEV 216



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 25/84 (29%), Positives = 43/84 (51%)

Query: 451 AGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVT 510
           A + D A  LF ++      P   TY+++I G C+ G++ +A      M+ +G  PN  T
Sbjct: 3   ARKHDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNAST 62

Query: 511 FNTLMHGFLQNNKTSKVVELLHKM 534
            NTL+ G  +  + S  ++L  +M
Sbjct: 63  MNTLLLGLCEIGQMSSALKLFREM 86


>gi|356561401|ref|XP_003548970.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Glycine max]
          Length = 447

 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 128/408 (31%), Positives = 212/408 (51%), Gaps = 13/408 (3%)

Query: 63  FGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGN 122
           F  +  ++ +PPI  F  + G + K +HY   IS  R++   G+ P+ +TLNILINCF  
Sbjct: 53  FNRLLLVRHTPPIIEFGKILGYLVKMKHYPTAISLSRQMEVKGIEPNLVTLNILINCF-- 110

Query: 123 KERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGD 182
                C   ++  +  +   ++  G +PD IT  TL+ G C  G +  +L  H K+V+  
Sbjct: 111 -----CHLGQMAFSFSVLGKILKLGYQPDTITLNTLMKGLCLKGEVKRSLHFHDKVVAQG 165

Query: 183 YENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAG 242
           ++       N  SY  +++ LCK G    A +L   ++ R   P VV+ +T+I G C   
Sbjct: 166 FQ------MNQVSYGTLLNGLCKIGETRCAVKLLRMIEDRSTRPDVVMYSTIIDGLCKDK 219

Query: 243 NWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYN 302
              +    F EM   G  PN++T++ +I   C  G++  A  LL  MI + +NP+ +TYN
Sbjct: 220 IVNQAYDFFSEMNARGIFPNVITYSTLIWGFCLAGQLMGAFSLLNEMILKNINPNVYTYN 279

Query: 303 SLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISN 362
            L+D  C  G++  A+++   MH KG    VV+YN +++G CK  N+++A +L+ ++   
Sbjct: 280 ILIDALCKEGKVKEAKKLLAEMHHKGQPADVVTYNSVLDGLCKSQNLDKATALFMKMKKW 339

Query: 363 GVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEA 422
           G++    TY  L+ GL + G+   AQKLF  + +     D+ TYN++I GLCK     +A
Sbjct: 340 GIQPNKYTYTALIDGLCKGGRLKNAQKLFQHLLVKGCCIDVRTYNVMISGLCKEGMFDKA 399

Query: 423 VKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLV 470
           + +   +E N        F+ +I  L +    D A +L H +  KGL+
Sbjct: 400 LAMKSKMEDNGCIPNAVTFDIIIRSLFEKDENDKAEKLLHGMIAKGLL 447



 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 119/406 (29%), Positives = 204/406 (50%), Gaps = 6/406 (1%)

Query: 129 VENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLI 188
           +EN + +    F  ++     P +I +G ++    +  +   A+ L ++M     E    
Sbjct: 42  IENVVDDTVSQFNRLLLVRHTPPIIEFGKILGYLVKMKHYPTAISLSRQMEVKGIE---- 97

Query: 189 SKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVN 248
              N+ + +I+I+  C  G +  +  +  ++   G  P  +   TL+ G C  G  +   
Sbjct: 98  --PNLVTLNILINCFCHLGQMAFSFSVLGKILKLGYQPDTITLNTLMKGLCLKGEVKRSL 155

Query: 249 GLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGY 308
               +++  G + N +++  +++ LCK G+   A  LL ++  R   PD   Y++++DG 
Sbjct: 156 HFHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAVKLLRMIEDRSTRPDVVMYSTIIDGL 215

Query: 309 CLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTV 368
           C    ++ A + F  M+++G    V++Y+ LI G+C    +  A SL  ++I   +   V
Sbjct: 216 CKDKIVNQAYDFFSEMNARGIFPNVITYSTLIWGFCLAGQLMGAFSLLNEMILKNINPNV 275

Query: 369 ITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHM 428
            TYN L+  L + G+   A+KL  EM       D+ TYN ++DGLCK+  + +A  LF  
Sbjct: 276 YTYNILIDALCKEGKVKEAKKLLAEMHHKGQPADVVTYNSVLDGLCKSQNLDKATALFMK 335

Query: 429 LEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGK 488
           ++    +     +  LIDGLCK GRL NA +LF  L  KG    V TY++MI GLC++G 
Sbjct: 336 MKKWGIQPNKYTYTALIDGLCKGGRLKNAQKLFQHLLVKGCCIDVRTYNVMISGLCKEGM 395

Query: 489 LEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKM 534
            +KA      ME NGC PN VTF+ ++    + ++  K  +LLH M
Sbjct: 396 FDKALAMKSKMEDNGCIPNAVTFDIIIRSLFEKDENDKAEKLLHGM 441



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 114/368 (30%), Positives = 192/368 (52%), Gaps = 3/368 (0%)

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
           I  +  I+  L K      A  L  +M+ +GI P +V    LI+ FC  G       +  
Sbjct: 65  IIEFGKILGYLVKMKHYPTAISLSRQMEVKGIEPNLVTLNILINCFCHLGQMAFSFSVLG 124

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
           ++L LG +P+ +T N ++  LC  G++  +    + ++ +G   ++ +Y +L++G C +G
Sbjct: 125 KILKLGYQPDTITLNTLMKGLCLKGEVKRSLHFHDKVVAQGFQMNQVSYGTLLNGLCKIG 184

Query: 313 RIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYN 372
               A ++   +  +  +  VV Y+ +I+G CK   V +A   + ++ + G+   VITY+
Sbjct: 185 ETRCAVKLLRMIEDRSTRPDVVMYSTIIDGLCKDKIVNQAYDFFSEMNARGIFPNVITYS 244

Query: 373 TLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMN 432
           TL+ G   AGQ   A  L +EM L N+ P++ TYNILID LCK   V+EA KL   +   
Sbjct: 245 TLIWGFCLAGQLMGAFSLLNEMILKNINPNVYTYNILIDALCKEGKVKEAKKLLAEMHHK 304

Query: 433 KFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKA 492
                +  +N ++DGLCK+  LD A  LF K+ + G+ P   TY+ +I GLC+ G+L+ A
Sbjct: 305 GQPADVVTYNSVLDGLCKSQNLDKATALFMKMKKWGIQPNKYTYTALIDGLCKGGRLKNA 364

Query: 493 NDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVV 552
                ++   GC  +V T+N ++ G  +     K + +  KM   +   +P+  TF I++
Sbjct: 365 QKLFQHLLVKGCCIDVRTYNVMISGLCKEGMFDKALAMKSKME--DNGCIPNAVTFDIII 422

Query: 553 -DLLAKDE 559
             L  KDE
Sbjct: 423 RSLFEKDE 430



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 71/246 (28%), Positives = 117/246 (47%), Gaps = 15/246 (6%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CK  I+N  +A  FF  M      P + +++ L              S   +++   + P
Sbjct: 216 CKDKIVN--QAYDFFSEMNARGIFPNVITYSTLIWGFCLAGQLMGAFSLLNEMILKNINP 273

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           +  T NILI+        LC E ++KEA  L   M   G   DV+TY ++++G C++ NL
Sbjct: 274 NVYTYNILID-------ALCKEGKVKEAKKLLAEMHHKGQPADVVTYNSVLDGLCKSQNL 326

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
             A  L  KM     +       N ++Y+ +ID LCK G +  A++LF  +  +G    V
Sbjct: 327 DKATALFMKMKKWGIQ------PNKYTYTALIDGLCKGGRLKNAQKLFQHLLVKGCCIDV 380

Query: 229 VVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLEL 288
                +I G C  G +++   +  +M D G  PN +TF+++I  L +  + ++A  LL  
Sbjct: 381 RTYNVMISGLCKEGMFDKALAMKSKMEDNGCIPNAVTFDIIIRSLFEKDENDKAEKLLHG 440

Query: 289 MIQRGL 294
           MI +GL
Sbjct: 441 MIAKGL 446



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 44/169 (26%), Positives = 86/169 (50%), Gaps = 2/169 (1%)

Query: 391 FDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCK 450
           F+ + L    P +  +  ++  L K      A+ L   +E+   E  +   N LI+  C 
Sbjct: 53  FNRLLLVRHTPPIIEFGKILGYLVKMKHYPTAISLSRQMEVKGIEPNLVTLNILINCFCH 112

Query: 451 AGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVT 510
            G++  ++ +  K+ + G  P  +T + ++ GLC KG+++++  F   +   G   N V+
Sbjct: 113 LGQMAFSFSVLGKILKLGYQPDTITLNTLMKGLCLKGEVKRSLHFHDKVVAQGFQMNQVS 172

Query: 511 FNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDE 559
           + TL++G  +  +T   V+LL +M E +R+  PD   +S ++D L KD+
Sbjct: 173 YGTLLNGLCKIGETRCAVKLL-RMIE-DRSTRPDVVMYSTIIDGLCKDK 219


>gi|414885390|tpg|DAA61404.1| TPA: hypothetical protein ZEAMMB73_280584 [Zea mays]
          Length = 645

 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 134/479 (27%), Positives = 229/479 (47%), Gaps = 33/479 (6%)

Query: 56  LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNI 115
           L+EA Y F     ++  P + + N +   + K R        + +++  GL+P  +T N 
Sbjct: 135 LDEALYVF---RRLRTLPALPACNAVLDGLVKARRPGCAWELFDEMLRRGLVPSVVTYNT 191

Query: 116 LINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLH 175
           LIN           +  + +A  ++  M+A  + P+V+TY T+I   C  G +  A RL 
Sbjct: 192 LIN-------ACRFQGTVAKAQEVWDQMVAQQIDPNVVTYTTMICALCEEGCIGDAERLF 244

Query: 176 KKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLI 235
             M     E G+  + N ++Y++++   C+   V+ A  L+ E+   G+NP  V+ TTLI
Sbjct: 245 DAM----KEAGM--QPNQYTYNVLMSGHCQRDDVNSAVVLYQELLKSGLNPNAVIFTTLI 298

Query: 236 HGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLN 295
            GFC A  + E  G+F+EM   G  P +  +N ++D   + G   EA  L + M + GL 
Sbjct: 299 DGFCKAKRFSEAKGMFLEMPRFGVAPTVPVYNSLMDGAFRSGNAQEALALYQEMTRLGLC 358

Query: 296 PDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSL 355
           PD FT + ++ G C  G++  A      +   G      +YN LI+ YC+I N+EEA++ 
Sbjct: 359 PDEFTCSIVVRGLCDGGQMHVADRFLQGVQEDGVNLNAAAYNALIDEYCRIGNLEEALAT 418

Query: 356 YRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCK 415
             ++   G+   V++Y++L+ G  + G+   A  ++ EM    +EP++ TY  LI G  K
Sbjct: 419 CTRMTEVGIEPNVVSYSSLIDGHSKRGKMQIAMAIYTEMVAKGIEPNVVTYTALIHGHAK 478

Query: 416 NNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHK------------ 463
           N  +  A +L   +  N         + L+DGLC+  R+  A     +            
Sbjct: 479 NGGIDAAFRLHKEMIENGISPNAITVSVLVDGLCRENRVQEAVRFVMEYSGLKCSDIHSV 538

Query: 464 -----LPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHG 517
                + ++ L+P  V Y  +I+GL   G+  +A     YM K+G  P+  T+  L+ G
Sbjct: 539 FSNFTIEEECLIPNSVIYMTLIYGLYLDGQHCEAGKLFSYMRKSGMIPDSFTYTLLIRG 597



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 113/365 (30%), Positives = 186/365 (50%), Gaps = 2/365 (0%)

Query: 199 IIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLG 258
           ++D L K      A ELF EM  RG+ P+VV   TLI+     G   +   ++ +M+   
Sbjct: 157 VLDGLVKARRPGCAWELFDEMLRRGLVPSVVTYNTLINACRFQGTVAKAQEVWDQMVAQQ 216

Query: 259 PRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAR 318
             PN++T+  MI  LC+ G I +A  L + M + G+ P+++TYN LM G+C    +++A 
Sbjct: 217 IDPNVVTYTTMICALCEEGCIGDAERLFDAMKEAGMQPNQYTYNVLMSGHCQRDDVNSAV 276

Query: 319 EIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGL 378
            ++  +   G     V +  LI+G+CK     EA  ++ ++   GV  TV  YN+L+ G 
Sbjct: 277 VLYQELLKSGLNPNAVIFTTLIDGFCKAKRFSEAKGMFLEMPRFGVAPTVPVYNSLMDGA 336

Query: 379 FQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGI 438
           F++G A  A  L+ EM    + PD  T +I++ GLC    +  A +    ++ +      
Sbjct: 337 FRSGNAQEALALYQEMTRLGLCPDEFTCSIVVRGLCDGGQMHVADRFLQGVQEDGVNLNA 396

Query: 439 EIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLY 498
             +N LID  C+ G L+ A     ++ + G+ P VV+YS +I G  ++GK++ A      
Sbjct: 397 AAYNALIDEYCRIGNLEEALATCTRMTEVGIEPNVVSYSSLIDGHSKRGKMQIAMAIYTE 456

Query: 499 MEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKD 558
           M   G  PNVVT+  L+HG  +N        L  +M   E  + P+  T S++VD L ++
Sbjct: 457 MVAKGIEPNVVTYTALIHGHAKNGGIDAAFRLHKEMI--ENGISPNAITVSVLVDGLCRE 514

Query: 559 EKYHE 563
            +  E
Sbjct: 515 NRVQE 519



 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 126/458 (27%), Positives = 216/458 (47%), Gaps = 51/458 (11%)

Query: 74  PISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRI 133
           P  +  +L  A+++    D  +  +R+L ++  LP     N +++       GL    R 
Sbjct: 118 PAPALGVLVIALSQMGLLDEALYVFRRLRTLPALP---ACNAVLD-------GLVKARRP 167

Query: 134 KEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNI 193
             A  LF  M+  G+ P V+TY TLIN  CR                             
Sbjct: 168 GCAWELFDEMLRRGLVPSVVTYNTLINA-CRF---------------------------- 198

Query: 194 FSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIE 253
                       +G V KA+E++ +M  + I+P VV  TT+I   C  G   +   LF  
Sbjct: 199 ------------QGTVAKAQEVWDQMVAQQIDPNVVTYTTMICALCEEGCIGDAERLFDA 246

Query: 254 MLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGR 313
           M + G +PN  T+NV++   C+   +N A  L + +++ GLNP+   + +L+DG+C   R
Sbjct: 247 MKEAGMQPNQYTYNVLMSGHCQRDDVNSAVVLYQELLKSGLNPNAVIFTTLIDGFCKAKR 306

Query: 314 IDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNT 373
              A+ +FL M   G   TV  YN L++G  +  N +EA++LY+++   G+     T + 
Sbjct: 307 FSEAKGMFLEMPRFGVAPTVPVYNSLMDGAFRSGNAQEALALYQEMTRLGLCPDEFTCSI 366

Query: 374 LLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNK 433
           ++ GL   GQ   A +    ++   V  + + YN LID  C+   ++EA+     +    
Sbjct: 367 VVRGLCDGGQMHVADRFLQGVQEDGVNLNAAAYNALIDEYCRIGNLEEALATCTRMTEVG 426

Query: 434 FEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKAN 493
            E  +  ++ LIDG  K G++  A  ++ ++  KG+ P VVTY+ +IHG  + G ++ A 
Sbjct: 427 IEPNVVSYSSLIDGHSKRGKMQIAMAIYTEMVAKGIEPNVVTYTALIHGHAKNGGIDAAF 486

Query: 494 DFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELL 531
                M +NG +PN +T + L+ G  + N+  + V  +
Sbjct: 487 RLHKEMIENGISPNAITVSVLVDGLCRENRVQEAVRFV 524



 Score =  151 bits (382), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 111/395 (28%), Positives = 179/395 (45%), Gaps = 32/395 (8%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           C+ G I   +A   F  M      P   ++N+L     +    ++ +  Y++L+  GL P
Sbjct: 232 CEEGCIG--DAERLFDAMKEAGMQPNQYTYNVLMSGHCQRDDVNSAVVLYQELLKSGLNP 289

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           + +    LI+       G C   R  EA  +F  M  FGV P V  Y +L++G  R+GN 
Sbjct: 290 NAVIFTTLID-------GFCKAKRFSEAKGMFLEMPRFGVAPTVPVYNSLMDGAFRSGNA 342

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
             AL L+++M       GL      F+ SI++  LC  G +  A      ++  G+N   
Sbjct: 343 QEALALYQEMT----RLGLCPDE--FTCSIVVRGLCDGGQMHVADRFLQGVQEDGVNLNA 396

Query: 229 VVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLEL 288
                LI  +C  GN EE       M ++G  PN+++++ +ID   K GK+  A  +   
Sbjct: 397 AAYNALIDEYCRIGNLEEALATCTRMTEVGIEPNVVSYSSLIDGHSKRGKMQIAMAIYTE 456

Query: 289 MIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILN 348
           M+ +G+ P+  TY +L+ G+   G ID A  +   M   G     ++ ++L++G C+   
Sbjct: 457 MVAKGIEPNVVTYTALIHGHAKNGGIDAAFRLHKEMIENGISPNAITVSVLVDGLCRENR 516

Query: 349 VEEAM-----------SLYRQIISNGVRQ------TVITYNTLLSGLFQAGQAGYAQKLF 391
           V+EA+           S    + SN   +        + Y TL+ GL+  GQ   A KLF
Sbjct: 517 VQEAVRFVMEYSGLKCSDIHSVFSNFTIEEECLIPNSVIYMTLIYGLYLDGQHCEAGKLF 576

Query: 392 DEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLF 426
             M+   + PD  TY +LI G C    V  A+ L+
Sbjct: 577 SYMRKSGMIPDSFTYTLLIRGQCMLGYVLNAMMLY 611



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 98/336 (29%), Positives = 156/336 (46%), Gaps = 32/336 (9%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CK+     +EA+  F  M     +P +  +N L     ++ +    ++ Y+++  +GL P
Sbjct: 302 CKAK--RFSEAKGMFLEMPRFGVAPTVPVYNSLMDGAFRSGNAQEALALYQEMTRLGLCP 359

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           D  T +I++       RGLC   ++  A    + +   GV  +   Y  LI+ +CR GNL
Sbjct: 360 DEFTCSIVV-------RGLCDGGQMHVADRFLQGVQEDGVNLNAAAYNALIDEYCRIGNL 412

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
             AL    +M     E G+  + N+ SYS +ID   K G +  A  ++ EM  +GI P V
Sbjct: 413 EEALATCTRMT----EVGI--EPNVVSYSSLIDGHSKRGKMQIAMAIYTEMVAKGIEPNV 466

Query: 229 VVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEA------ 282
           V  T LIHG    G  +    L  EM++ G  PN +T +V++D LC+  ++ EA      
Sbjct: 467 VTYTALIHGHAKNGGIDAAFRLHKEMIENGISPNAITVSVLVDGLCRENRVQEAVRFVME 526

Query: 283 -NGLLELMI----------QRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKH 331
            +GL    I          +  L P+   Y +L+ G  L G+   A ++F  M   G   
Sbjct: 527 YSGLKCSDIHSVFSNFTIEEECLIPNSVIYMTLIYGLYLDGQHCEAGKLFSYMRKSGMIP 586

Query: 332 TVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQT 367
              +Y +LI G C +  V  AM LY  ++  GV+ T
Sbjct: 587 DSFTYTLLIRGQCMLGYVLNAMMLYADMMKIGVKPT 622


>gi|115471383|ref|NP_001059290.1| Os07g0249100 [Oryza sativa Japonica Group]
 gi|33146978|dbj|BAC80051.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|50508482|dbj|BAD30659.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113610826|dbj|BAF21204.1| Os07g0249100 [Oryza sativa Japonica Group]
 gi|215767773|dbj|BAH00002.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 882

 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 136/510 (26%), Positives = 252/510 (49%), Gaps = 16/510 (3%)

Query: 55  NLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLN 114
            L++A      M  ++  P  S++ +L GA+A+ R  +  +   R++  +G         
Sbjct: 159 RLDDAVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPERALELLRQMQEVGY-------E 211

Query: 115 ILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRL 174
           + ++ F    R L  E ++ +A  L   +    + PD++ Y   I+ F + GN+ +A + 
Sbjct: 212 VGVHLFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKF 271

Query: 175 HKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTL 234
             ++ +     GL  K +  SY+ +I  LCK G + +A+ELF +M+     P      T+
Sbjct: 272 FHELKA----QGL--KPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTM 325

Query: 235 IHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGL 294
           I G+  AG +E+   L   + + G  P++++FN ++ CL K  K++EA  L E+M ++  
Sbjct: 326 IMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVM-KKDA 384

Query: 295 NPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMS 354
            P+  TYN ++D  CL GR++ A  I   M        +++ NI+++  CK   +EEA  
Sbjct: 385 EPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYK 444

Query: 355 LYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLC 414
           ++      G     +TY +L+ GL + GQ   A +LF++M       +   Y  LI    
Sbjct: 445 IFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFF 504

Query: 415 KNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVV 474
            +   ++  K+F  L     +  + + N  +D + KAG ++    +F  +   G +P V 
Sbjct: 505 IHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVR 564

Query: 475 TYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKM 534
           +YSI+IHGL + G+  + ++    M++ G A +   +N ++ GF ++ K  K  E+L +M
Sbjct: 565 SYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEM 624

Query: 535 AEPERNLVPDDTTFSIVVDLLAKDEKYHEC 564
              E+ + P   T+  +VD LAK ++  E 
Sbjct: 625 K--EKCVQPTVATYGAIVDGLAKIDRLDEA 652



 Score =  214 bits (546), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 148/563 (26%), Positives = 249/563 (44%), Gaps = 54/563 (9%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CK+G   L EA   F  M   +  P   ++N +         ++       +L   G +P
Sbjct: 295 CKAG--RLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIP 352

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
             ++ N ++ C G K        ++ EA  LF+ M      P+  TY  +I+  C  G +
Sbjct: 353 SVVSFNSILTCLGKK-------RKVDEALSLFEVMKK-DAEPNSSTYNIIIDMLCLGGRV 404

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
             A R+  +M             N+ + +I++D LCK   +++A ++F     RG NP  
Sbjct: 405 EEAYRILDEMEHASL------FPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDC 458

Query: 229 VVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLEL 288
           V   +LI G    G  +E   LF +MLD G   N + +  +I      G+  + + + + 
Sbjct: 459 VTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKE 518

Query: 289 MIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILN 348
           +I+RG  PD    N+ MD     G ++  R IF  + S G    V SY+ILI+G  K   
Sbjct: 519 LIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQ 578

Query: 349 VEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNI 408
             E  +++  +   G       YN ++ G  ++G+   A ++ +EMK   V+P ++TY  
Sbjct: 579 ARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGA 638

Query: 409 LIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKG 468
           ++DGL K + + EA  LF   +    E  + +++ LIDG  K GR+D A+ +  ++ +KG
Sbjct: 639 IVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKG 698

Query: 469 LVPTVVT-----------------------------------YSIMIHGLCRKGKLEKAN 493
           L P V T                                   YSI+I+GLCR  K  KA 
Sbjct: 699 LTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAF 758

Query: 494 DFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
            F   M+K G  PNVVT+ T++ G  +    +    L  +        +PD  +F+ +++
Sbjct: 759 VFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFK--ANGGIPDAASFNALIE 816

Query: 554 LLAKDEKYHECSAV-SKSSYRAC 575
            ++   +  E   V  ++  R C
Sbjct: 817 GMSNANRAMEAYQVFEETRLRGC 839



 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 127/493 (25%), Positives = 230/493 (46%), Gaps = 37/493 (7%)

Query: 55  NLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLN 114
            ++EA   F  M      P  S++N++   +      +       ++    L P+ LT+N
Sbjct: 369 KVDEALSLFEVMKK-DAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVN 427

Query: 115 ILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRL 174
           I+++        LC   +++EA  +F++    G  PD +TY +LI+G  + G +  A RL
Sbjct: 428 IMVD-------RLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRL 480

Query: 175 HKKM--------------------VSGDYENG------LIS---KTNIFSYSIIIDSLCK 205
            +KM                    + G  E+G      LI    K ++   +  +D + K
Sbjct: 481 FEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFK 540

Query: 206 EGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLT 265
            G V+K + +F +++  G  P V   + LIHG   AG   E + +F  M   G   +   
Sbjct: 541 AGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARA 600

Query: 266 FNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMH 325
           +N ++D  CK GK+++A  +LE M ++ + P   TY +++DG   + R+D A  +F    
Sbjct: 601 YNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAK 660

Query: 326 SKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAG 385
           SKG +  VV Y+ LI+G+ K+  ++EA  +  +++  G+   V T+N+LL  L +A +  
Sbjct: 661 SKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEIN 720

Query: 386 YAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLI 445
            A   F  MK     P+  TY+ILI+GLC+     +A   +  ++       +  +  +I
Sbjct: 721 EALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMI 780

Query: 446 DGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCA 505
            GL K G + +A+ LF +    G +P   +++ +I G+    +  +A          GC 
Sbjct: 781 SGLAKVGNITDAYSLFERFKANGGIPDAASFNALIEGMSNANRAMEAYQVFEETRLRGCR 840

Query: 506 PNVVTFNTLMHGF 518
            N+ +  +L+   
Sbjct: 841 INIKSCISLLDAL 853



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 121/442 (27%), Positives = 202/442 (45%), Gaps = 9/442 (2%)

Query: 126 GLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYEN 185
            L    R+ +A      M     RP    Y  LI           AL L ++M    YE 
Sbjct: 153 ALVRARRLDDAVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPERALELLRQMQEVGYEV 212

Query: 186 GLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWE 245
           G      +  ++ ++ +L +EG V  A  L  E+KG  + P +V+    I  F  AGN +
Sbjct: 213 G------VHLFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVD 266

Query: 246 EVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLM 305
                F E+   G +P+ +++  MI  LCK G++ EA  L   M      P  + YN+++
Sbjct: 267 MAWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMI 326

Query: 306 DGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVR 365
            GY   GR + A ++   +  +GC  +VVS+N ++    K   V+EA+SL+ +++     
Sbjct: 327 MGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLF-EVMKKDAE 385

Query: 366 QTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKL 425
               TYN ++  L   G+   A ++ DEM+  ++ P+L T NI++D LCK   ++EA K+
Sbjct: 386 PNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKI 445

Query: 426 FHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCR 485
           F              +  LIDGL K G++D A+ LF K+   G     V Y+ +I     
Sbjct: 446 FESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFI 505

Query: 486 KGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDD 545
            G+ E  +     + + GC P++   NT M    +  +  K   +   +       +PD 
Sbjct: 506 HGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIR--SYGFLPDV 563

Query: 546 TTFSIVVDLLAKDEKYHECSAV 567
            ++SI++  L K  +  E S +
Sbjct: 564 RSYSILIHGLTKAGQARETSNI 585



 Score =  169 bits (427), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 104/363 (28%), Positives = 175/363 (48%), Gaps = 19/363 (5%)

Query: 98  YRKLVSIGLLPDFLTLNILINCF---GNKERGLCVENRIKEATWLFKNMIAFGVRPDVIT 154
           +++L+  G  PD   LN  ++C    G  E+G            +F+++ ++G  PDV +
Sbjct: 516 FKELIRRGCKPDLTLLNTYMDCVFKAGEVEKG----------RMIFEDIRSYGFLPDVRS 565

Query: 155 YGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKE 214
           Y  LI+G  + G       +   M    +        +  +Y+ ++D  CK G V KA E
Sbjct: 566 YSILIHGLTKAGQARETSNIFHAMKQQGF------ALDARAYNAVVDGFCKSGKVHKAYE 619

Query: 215 LFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLC 274
           +  EMK + + P V     ++ G       +E   LF E    G   N++ ++ +ID   
Sbjct: 620 ILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFG 679

Query: 275 KGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVV 334
           K G+I+EA  +LE M+++GL P+ +T+NSL+D       I+ A   F SM    C     
Sbjct: 680 KVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTY 739

Query: 335 SYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEM 394
           +Y+ILING C++    +A   ++ +   G+   V+TY T++SGL + G    A  LF+  
Sbjct: 740 TYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERF 799

Query: 395 KLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRL 454
           K     PD +++N LI+G+   N   EA ++F    +      I+    L+D L K+  L
Sbjct: 800 KANGGIPDAASFNALIEGMSNANRAMEAYQVFEETRLRGCRINIKSCISLLDALNKSECL 859

Query: 455 DNA 457
           + A
Sbjct: 860 EQA 862



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 76/305 (24%), Positives = 146/305 (47%), Gaps = 4/305 (1%)

Query: 272 CLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKH 331
            L +  ++++A   + +M +    P    Y  L+       R + A E+   M   G + 
Sbjct: 153 ALVRARRLDDAVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPERALELLRQMQEVGYEV 212

Query: 332 TVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLF 391
            V  +  L+    +   V +A++L  ++  + +   ++ YN  +    +AG    A K F
Sbjct: 213 GVHLFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFF 272

Query: 392 DEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKA 451
            E+K   ++PD  +Y  +I  LCK   + EA +LF  +E  +       +N +I G   A
Sbjct: 273 HELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSA 332

Query: 452 GRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTF 511
           GR ++A++L  +L ++G +P+VV+++ ++  L +K K+++A      M+K+   PN  T+
Sbjct: 333 GRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDA-EPNSSTY 391

Query: 512 NTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKS- 570
           N ++       +  +   +L +M     +L P+  T +I+VD L K  K  E   + +S 
Sbjct: 392 NIIIDMLCLGGRVEEAYRILDEMEHA--SLFPNLLTVNIMVDRLCKARKLEEAYKIFESA 449

Query: 571 SYRAC 575
           S R C
Sbjct: 450 SQRGC 454



 Score = 48.5 bits (114), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 32/156 (20%), Positives = 70/156 (44%), Gaps = 2/156 (1%)

Query: 409 LIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKG 468
           L   L +   + +AV    ++   KF      +  LI  L +A R + A EL  ++ + G
Sbjct: 150 LAAALVRARRLDDAVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPERALELLRQMQEVG 209

Query: 469 LVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVV 528
               V  ++ ++  L R+G++  A   +  ++ +   P++V +N  +  F +        
Sbjct: 210 YEVGVHLFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAW 269

Query: 529 ELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHEC 564
           +  H++    + L PDD +++ ++ +L K  +  E 
Sbjct: 270 KFFHELK--AQGLKPDDVSYTSMIWVLCKAGRLGEA 303


>gi|115446101|ref|NP_001046830.1| Os02g0470000 [Oryza sativa Japonica Group]
 gi|47497415|dbj|BAD19472.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|47497530|dbj|BAD19582.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|113536361|dbj|BAF08744.1| Os02g0470000 [Oryza sativa Japonica Group]
          Length = 649

 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 140/496 (28%), Positives = 238/496 (47%), Gaps = 70/496 (14%)

Query: 126 GLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKM-VSGD-Y 183
           G C + R+ +A  +     A G   +V+TY  LI+G+CR+G L  ALRL   M V+ D Y
Sbjct: 133 GYCRDGRLADAERVLGAARATGA-ANVVTYTALIDGYCRSGRLDDALRLIASMPVAPDTY 191

Query: 184 ENGLISK------------------------TNIFSYSIIIDSLCKEGLVDKAKELFLEM 219
               + K                         N  +++  I S C+ GL+D+A +L  +M
Sbjct: 192 TYNTVLKGLCIAKKWEEAEELMAEMIRNRCPPNEVTFATQIRSFCQNGLLDRAVQLLDQM 251

Query: 220 KGRGINPAVVVCTTLIHGF--------------------------------CCAGNWEEV 247
              G  P VV+ +TLI+GF                                C A  WE++
Sbjct: 252 PRYGCTPDVVIYSTLINGFSEQGHVDQALDLLNTMLCKPNTVCYNAALKGLCIAERWEDI 311

Query: 248 NGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDG 307
             L  EM+  G  PN  TF+++I  LC+   ++ A  +LE M + G  PD   YN +++ 
Sbjct: 312 GELMAEMVRKGCSPNEATFSMLISSLCQNNLVDSAVEVLEQMEKYGCEPDTVNYNIIINS 371

Query: 308 YCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQT 367
               GR+D A  +  SM    CK   + +N ++ G+C+     +A  L  Q+  +     
Sbjct: 372 LSERGRVDDALRLLNSMV---CKPDALGFNAVLKGFCRAERWHDASELIAQMFRDDCPLI 428

Query: 368 VITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFH 427
            +T+N L+  L Q G   YA ++F++M  Y   PD+ TY+ L++G  +   V+ A++LF 
Sbjct: 429 EMTFNILIDMLCQNGLVNYATQVFEQMPRYRCTPDIVTYSSLLNGFSEQGLVEVAIQLFR 488

Query: 428 MLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKG 487
            +      F    +N ++ GLC+A R ++A EL  ++  K   P  VT++I+I+ LC+KG
Sbjct: 489 SMPCKPDIFS---YNAVLKGLCRAARWEDAGELIAEMVGKDCPPNEVTFNILINSLCQKG 545

Query: 488 KLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTT 547
            +++A + L  M   G  P++ T+N L++GF +  +    ++LL  M+       PD  +
Sbjct: 546 LVDRAIEVLEQMPNYGSTPDIFTYNALINGFSEQGRLDDALKLLSTMS-----CKPDAIS 600

Query: 548 FSIVVDLLAKDEKYHE 563
           ++  +  L + E++ +
Sbjct: 601 YNSTLKGLCRAERWQD 616



 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 94/332 (28%), Positives = 158/332 (47%), Gaps = 51/332 (15%)

Query: 72  SPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVEN 131
           SP  ++F++L  ++ +N   D+ +    ++   G  PD +  NI+IN     ERG     
Sbjct: 324 SPNEATFSMLISSLCQNNLVDSAVEVLEQMEKYGCEPDTVNYNIIINSLS--ERG----- 376

Query: 132 RIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKT 191
           R+ +A  L  +M+    +PD + +  ++ GFCR      A  L  +M   D    LI  T
Sbjct: 377 RVDDALRLLNSMV---CKPDALGFNAVLKGFCRAERWHDASELIAQMFRDDCP--LIEMT 431

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGF------------- 238
               ++I+ID LC+ GLV+ A ++F +M      P +V  ++L++GF             
Sbjct: 432 ----FNILIDMLCQNGLVNYATQVFEQMPRYRCTPDIVTYSSLLNGFSEQGLVEVAIQLF 487

Query: 239 -------------------CCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKI 279
                              C A  WE+   L  EM+     PN +TFN++I+ LC+ G +
Sbjct: 488 RSMPCKPDIFSYNAVLKGLCRAARWEDAGELIAEMVGKDCPPNEVTFNILINSLCQKGLV 547

Query: 280 NEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNIL 339
           + A  +LE M   G  PD FTYN+L++G+   GR+D A ++  +M    CK   +SYN  
Sbjct: 548 DRAIEVLEQMPNYGSTPDIFTYNALINGFSEQGRLDDALKLLSTM---SCKPDAISYNST 604

Query: 340 INGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
           + G C+    ++A  L  +++ N      +T+
Sbjct: 605 LKGLCRAERWQDAEELVAEMLRNKCTPNEVTF 636



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 85/310 (27%), Positives = 148/310 (47%), Gaps = 12/310 (3%)

Query: 264 LTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLS 323
           ++ N ++   C+ G++ +A  +L      G   +  TY +L+DGYC  GR+D A  +  S
Sbjct: 125 VSHNTLVAGYCRDGRLADAERVLGAARATGA-ANVVTYTALIDGYCRSGRLDDALRLIAS 183

Query: 324 MHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQ 383
           M      +T   YN ++ G C     EEA  L  ++I N      +T+ T +    Q G 
Sbjct: 184 MPVAPDTYT---YNTVLKGLCIAKKWEEAEELMAEMIRNRCPPNEVTFATQIRSFCQNGL 240

Query: 384 AGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNC 443
              A +L D+M  Y   PD+  Y+ LI+G  +   V +A+ L + +           +N 
Sbjct: 241 LDRAVQLLDQMPRYGCTPDVVIYSTLINGFSEQGHVDQALDLLNTMLCKP---NTVCYNA 297

Query: 444 LIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNG 503
            + GLC A R ++  EL  ++ +KG  P   T+S++I  LC+   ++ A + L  MEK G
Sbjct: 298 ALKGLCIAERWEDIGELMAEMVRKGCSPNEATFSMLISSLCQNNLVDSAVEVLEQMEKYG 357

Query: 504 CAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
           C P+ V +N +++   +  +    + LL+ M        PD   F+ V+    + E++H+
Sbjct: 358 CEPDTVNYNIIINSLSERGRVDDALRLLNSMV-----CKPDALGFNAVLKGFCRAERWHD 412

Query: 564 CSAVSKSSYR 573
            S +    +R
Sbjct: 413 ASELIAQMFR 422


>gi|38567720|emb|CAE76009.1| B1358B12.18 [Oryza sativa Japonica Group]
 gi|90265197|emb|CAH67636.1| B0812A04.6 [Oryza sativa Indica Group]
          Length = 609

 Score =  215 bits (548), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 129/436 (29%), Positives = 223/436 (51%), Gaps = 30/436 (6%)

Query: 105 GLLPDFLTLNIL----------INCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVIT 154
           GLLPD  TL +L           +C G   R         EA   +  ++  G+ P+   
Sbjct: 187 GLLPDACTLVLLALRRGIRLEPTSCTGLMSRFPTA----PEACAFYLQLLDAGLPPEAKL 242

Query: 155 YGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKE 214
           +  L+    R G L+ A  +  +M S     G+  +  + S++ +I  +C+ G +D A+ 
Sbjct: 243 FNVLMRDLVRLGELASAQNVFDEMQS----RGV--RRTVVSFNTMISGMCRAGDLDGAET 296

Query: 215 LFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLC 274
           L   M   G+ P V     LI G C  G  E+  G+F +M   G +PN + F ++ID  C
Sbjct: 297 LHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHC 356

Query: 275 KGGKINEANGLLEL---MIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKH 331
           K G   +A  +LEL   M +RG+ PD  TYN++++G C    + +A  I + M S G + 
Sbjct: 357 KKG---DAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRP 413

Query: 332 TVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLF 391
             V+Y  LI+GYCK   ++ AM + + +++ GV    +TY  L+SGL +AG++  A+++ 
Sbjct: 414 DTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVL 473

Query: 392 DEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKA 451
            EM    +EPD +TY ++ID  C+   V+  ++L   ++    + G+  +N +++G CK 
Sbjct: 474 GEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNGFCKL 533

Query: 452 GRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTF 511
           G++ NA  L + +   G+ P  +TY+I++ G C+ GK+    D        G  P++  +
Sbjct: 534 GQMKNADMLLNAMINIGVSPDDITYNILLDGHCKHGKV---TDIEELKSAKGTVPDLGVY 590

Query: 512 NTLMHGFLQNNKTSKV 527
            +++ G +   KT+K 
Sbjct: 591 TSIV-GEIVKKKTTKT 605



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 109/343 (31%), Positives = 176/343 (51%), Gaps = 2/343 (0%)

Query: 211 KAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMI 270
           +A   +L++   G+ P   +   L+      G       +F EM   G R  +++FN MI
Sbjct: 223 EACAFYLQLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMI 282

Query: 271 DCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCK 330
             +C+ G ++ A  L   M + G+ PD +TY +L+ G C VGRI+ AR +F  M  +G K
Sbjct: 283 SGMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMK 342

Query: 331 HTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKL 390
              V + ILI+ +CK  + E  + L+R++   GVR   +TYN +++GL +A     A  +
Sbjct: 343 PNAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGI 402

Query: 391 FDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCK 450
             EM+   + PD  TY  LIDG CK   +  A+++   +           +  LI GL K
Sbjct: 403 VVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSK 462

Query: 451 AGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVT 510
           AGR  +A  +  ++ + GL P   TY+++I   CRKG ++     L  M+  G  P VVT
Sbjct: 463 AGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVT 522

Query: 511 FNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
           +N +M+GF +  +      LL+ M      + PDD T++I++D
Sbjct: 523 YNVIMNGFCKLGQMKNADMLLNAMINI--GVSPDDITYNILLD 563



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 109/392 (27%), Positives = 190/392 (48%), Gaps = 23/392 (5%)

Query: 37  PETQL-NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVI 95
           PE +L N  + +  + G   L  A+  F  M        + SFN +   + +    D   
Sbjct: 238 PEAKLFNVLMRDLVRLG--ELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGAE 295

Query: 96  SFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITY 155
           + +R++   G+ PD  T   LI       +GLC   RI++A  +F+ M   G++P+ + +
Sbjct: 296 TLHRRMSEAGVTPDVYTYGALI-------QGLCRVGRIEDARGVFEKMCGRGMKPNAVVF 348

Query: 156 GTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKEL 215
             LI+  C+ G+    L LH++M     E G+  + +  +Y+ I++ LC+   +  A  +
Sbjct: 349 TILIDAHCKKGDAETMLELHREM----RERGV--RPDAVTYNAIVNGLCRARDLKSASGI 402

Query: 216 FLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCK 275
            +EM+  G+ P  V  TTLI G+C     +    +   M+  G   + +T+  +I  L K
Sbjct: 403 VVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSK 462

Query: 276 GGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVS 335
            G+  +A  +L  M++ GL PD  TY  ++D +C  G + T   +   M +KG K  VV+
Sbjct: 463 AGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVT 522

Query: 336 YNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMK 395
           YN+++NG+CK+  ++ A  L   +I+ GV    ITYN LL G  + G+    ++L     
Sbjct: 523 YNVIMNGFCKLGQMKNADMLLNAMINIGVSPDDITYNILLDGHCKHGKVTDIEEL---KS 579

Query: 396 LYNVEPDLSTYNILIDGLCKNNCVQEAVKLFH 427
                PDL  Y  ++  + K    ++  K +H
Sbjct: 580 AKGTVPDLGVYTSIVGEIVK----KKTTKTYH 607



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 80/294 (27%), Positives = 149/294 (50%), Gaps = 11/294 (3%)

Query: 277 GKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTARE---IFLSMHSKGCKHTV 333
           G + +A  L+ L ++RG+  +  +   LM       R  TA E    +L +   G     
Sbjct: 187 GLLPDACTLVLLALRRGIRLEPTSCTGLMS------RFPTAPEACAFYLQLLDAGLPPEA 240

Query: 334 VSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDE 393
             +N+L+    ++  +  A +++ ++ S GVR+TV+++NT++SG+ +AG    A+ L   
Sbjct: 241 KLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGAETLHRR 300

Query: 394 MKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGR 453
           M    V PD+ TY  LI GLC+   +++A  +F  +     +    +F  LID  CK G 
Sbjct: 301 MSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKGD 360

Query: 454 LDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNT 513
            +   EL  ++ ++G+ P  VTY+ +++GLCR   L+ A+  ++ M   G  P+ VT+ T
Sbjct: 361 AETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTVTYTT 420

Query: 514 LMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAV 567
           L+ G+ +  +    +E+   M      L  D+ T++ ++  L+K  +  +   V
Sbjct: 421 LIDGYCKEEELDMAMEIKQNMVAEGVGL--DEVTYTALISGLSKAGRSADAERV 472


>gi|356560325|ref|XP_003548443.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
           mitochondrial-like [Glycine max]
          Length = 746

 Score =  215 bits (547), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 135/446 (30%), Positives = 206/446 (46%), Gaps = 19/446 (4%)

Query: 76  SSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKE 135
           +S N L   + + R    +     ++    + P  +T  IL+N        LC   RI E
Sbjct: 282 ASCNALLTWLGRGRDIKRMNELLAEMEKRKIRPSVVTFGILVN-------HLCKARRIDE 334

Query: 136 ATWLFKNMIA------FGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLIS 189
           A  +F  +         GV PDV+ + TLI+G C+ G     L L ++M  G+     I+
Sbjct: 335 ALQVFDRLRGKGGSNWVGVEPDVVLFNTLIDGLCKVGKEEDGLSLLEEMKMGN-----IN 389

Query: 190 KTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNG 249
           + N  +Y+ +ID   K G  D+A ELF +M   G+ P V+   TL+ G C  G       
Sbjct: 390 RPNTVTYNCLIDGFFKAGNFDRAHELFRQMNEEGVQPNVITLNTLVDGLCKHGRVHRAVE 449

Query: 250 LFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYC 309
            F EM   G + N  T+  +I   C    IN A    E M+  G +PD   Y SL+ G C
Sbjct: 450 FFNEMKGKGLKGNAATYTALISAFCGVNNINRAMQCFEEMLSSGCSPDAVVYYSLISGLC 509

Query: 310 LVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVI 369
           + GR++ A  +   +   G       YN+LI+G+CK   +E    L  ++   GV+   I
Sbjct: 510 IAGRMNDASVVVSKLKLAGFSLDRSCYNVLISGFCKKKKLERVYELLTEMEETGVKPDTI 569

Query: 370 TYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLF-HM 428
           TYNTL+S L + G    A K+ ++M    + P + TY  +I   C    V E +K+F  M
Sbjct: 570 TYNTLISYLGKTGDFATASKVMEKMIKEGLRPSVVTYGAIIHAYCSKKNVDEGMKIFGEM 629

Query: 429 LEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGK 488
              +K      I+N LID LC+   +D A  L   +  K + P   TY+ ++ G+  K  
Sbjct: 630 CSTSKVPPNTVIYNILIDALCRNNDVDRAISLMEDMKVKRVRPNTTTYNAILKGVRDKKM 689

Query: 489 LEKANDFLLYMEKNGCAPNVVTFNTL 514
           L KA + +  M +  C P+ +T   L
Sbjct: 690 LHKAFELMDRMVEEACRPDYITMEVL 715



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 126/452 (27%), Positives = 213/452 (47%), Gaps = 24/452 (5%)

Query: 53  IINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVS------IGL 106
           I  +NE       M   +  P + +F +L   + K R  D  +  + +L        +G+
Sbjct: 297 IKRMNE---LLAEMEKRKIRPSVVTFGILVNHLCKARRIDEALQVFDRLRGKGGSNWVGV 353

Query: 107 LPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGV-RPDVITYGTLINGFCRT 165
            PD +  N LI+       GLC   + ++   L + M    + RP+ +TY  LI+GF + 
Sbjct: 354 EPDVVLFNTLID-------GLCKVGKEEDGLSLLEEMKMGNINRPNTVTYNCLIDGFFKA 406

Query: 166 GNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGIN 225
           GN   A  L ++M     E G+  + N+ + + ++D LCK G V +A E F EMKG+G+ 
Sbjct: 407 GNFDRAHELFRQM----NEEGV--QPNVITLNTLVDGLCKHGRVHRAVEFFNEMKGKGLK 460

Query: 226 PAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGL 285
                 T LI  FC   N       F EML  G  P+ + +  +I  LC  G++N+A+ +
Sbjct: 461 GNAATYTALISAFCGVNNINRAMQCFEEMLSSGCSPDAVVYYSLISGLCIAGRMNDASVV 520

Query: 286 LELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCK 345
           +  +   G + DR  YN L+ G+C   +++   E+   M   G K   ++YN LI+   K
Sbjct: 521 VSKLKLAGFSLDRSCYNVLISGFCKKKKLERVYELLTEMEETGVKPDTITYNTLISYLGK 580

Query: 346 ILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEM-KLYNVEPDLS 404
             +   A  +  ++I  G+R +V+TY  ++             K+F EM     V P+  
Sbjct: 581 TGDFATASKVMEKMIKEGLRPSVVTYGAIIHAYCSKKNVDEGMKIFGEMCSTSKVPPNTV 640

Query: 405 TYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKL 464
            YNILID LC+NN V  A+ L   +++ +       +N ++ G+     L  A+EL  ++
Sbjct: 641 IYNILIDALCRNNDVDRAISLMEDMKVKRVRPNTTTYNAILKGVRDKKMLHKAFELMDRM 700

Query: 465 PQKGLVPTVVTYSIMIHGLCRKGKLEKANDFL 496
            ++   P  +T  ++   L   G++EK   F+
Sbjct: 701 VEEACRPDYITMEVLTEWLSAVGEIEKLKHFV 732



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 134/481 (27%), Positives = 231/481 (48%), Gaps = 27/481 (5%)

Query: 94  VISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVI 153
           V+    KL   G+ PD   L  L+         LC + +   A  +   ++  G   D  
Sbjct: 230 VVGLVAKLGERGVFPDGFKLTQLVG-------KLCGDQKNGVAWEVLHCVMRLGGAVDAA 282

Query: 154 TYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAK 213
           +   L+    R  ++     L  +M     E   I + ++ ++ I+++ LCK   +D+A 
Sbjct: 283 SCNALLTWLGRGRDIKRMNELLAEM-----EKRKI-RPSVVTFGILVNHLCKARRIDEAL 336

Query: 214 ELFLEMKGRG------INPAVVVCTTLIHGFCCAGNWEEVNGL-FIEMLDLGP--RPNLL 264
           ++F  ++G+G      + P VV+  TLI G C  G  +E +GL  +E + +G   RPN +
Sbjct: 337 QVFDRLRGKGGSNWVGVEPDVVLFNTLIDGLCKVG--KEEDGLSLLEEMKMGNINRPNTV 394

Query: 265 TFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSM 324
           T+N +ID   K G  + A+ L   M + G+ P+  T N+L+DG C  GR+  A E F  M
Sbjct: 395 TYNCLIDGFFKAGNFDRAHELFRQMNEEGVQPNVITLNTLVDGLCKHGRVHRAVEFFNEM 454

Query: 325 HSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQA 384
             KG K    +Y  LI+ +C + N+  AM  + +++S+G     + Y +L+SGL  AG+ 
Sbjct: 455 KGKGLKGNAATYTALISAFCGVNNINRAMQCFEEMLSSGCSPDAVVYYSLISGLCIAGRM 514

Query: 385 GYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCL 444
             A  +  ++KL     D S YN+LI G CK   ++   +L   +E    +     +N L
Sbjct: 515 NDASVVVSKLKLAGFSLDRSCYNVLISGFCKKKKLERVYELLTEMEETGVKPDTITYNTL 574

Query: 445 IDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYM-EKNG 503
           I  L K G    A ++  K+ ++GL P+VVTY  +IH  C K  +++       M   + 
Sbjct: 575 ISYLGKTGDFATASKVMEKMIKEGLRPSVVTYGAIIHAYCSKKNVDEGMKIFGEMCSTSK 634

Query: 504 CAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
             PN V +N L+    +NN   + + L+  M    + + P+ TT++ ++  +   +  H+
Sbjct: 635 VPPNTVIYNILIDALCRNNDVDRAISLMEDMK--VKRVRPNTTTYNAILKGVRDKKMLHK 692

Query: 564 C 564
            
Sbjct: 693 A 693



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 113/456 (24%), Positives = 188/456 (41%), Gaps = 91/456 (19%)

Query: 195 SYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEM 254
           S S+++  L    LV+ +  LF ++     +P +  C  L+     +G      G  + +
Sbjct: 143 SASLLLQCLENARLVNDSLLLFNQLDPSSKSPQL--CHGLLRVLLKSGR----AGDALHV 196

Query: 255 LDLGPRPNL---LTFNVMIDCLCKGGKI---NEANGLLELMIQRGLNPDRFTYNSLMDGY 308
           LD  P+ N    +T  ++   L + G+     E  GL+  + +RG+ PD F    L+   
Sbjct: 197 LDEMPQANSGFSVTGEIVFGELVRSGRSFPDGEVVGLVAKLGERGVFPDGFKLTQLVGKL 256

Query: 309 C-----------------LVGRIDTA------------------REIFLSMHSKGCKHTV 333
           C                 L G +D A                   E+   M  +  + +V
Sbjct: 257 CGDQKNGVAWEVLHCVMRLGGAVDAASCNALLTWLGRGRDIKRMNELLAEMEKRKIRPSV 316

Query: 334 VSYNILINGYCKILNVEEAMSLYRQIISN------GVRQTVITYNTLLSGLFQAGQAGYA 387
           V++ IL+N  CK   ++EA+ ++ ++         GV   V+ +NTL+ GL + G+    
Sbjct: 317 VTFGILVNHLCKARRIDEALQVFDRLRGKGGSNWVGVEPDVVLFNTLIDGLCKVGKEEDG 376

Query: 388 QKLFDEMKLYNV-EPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLID 446
             L +EMK+ N+  P+  TYN LIDG  K      A +LF  +     +  +   N L+D
Sbjct: 377 LSLLEEMKMGNINRPNTVTYNCLIDGFFKAGNFDRAHELFRQMNEEGVQPNVITLNTLVD 436

Query: 447 GLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAP 506
           GLCK GR+  A E F+++  KGL     TY+ +I   C    + +A      M  +GC+P
Sbjct: 437 GLCKHGRVHRAVEFFNEMKGKGLKGNAATYTALISAFCGVNNINRAMQCFEEMLSSGCSP 496

Query: 507 NVVT-----------------------------------FNTLMHGFLQNNKTSKVVELL 531
           + V                                    +N L+ GF +  K  +V ELL
Sbjct: 497 DAVVYYSLISGLCIAGRMNDASVVVSKLKLAGFSLDRSCYNVLISGFCKKKKLERVYELL 556

Query: 532 HKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAV 567
            +M E    + PD  T++ ++  L K   +   S V
Sbjct: 557 TEMEET--GVKPDTITYNTLISYLGKTGDFATASKV 590


>gi|297849270|ref|XP_002892516.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297338358|gb|EFH68775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 607

 Score =  215 bits (547), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 130/397 (32%), Positives = 212/397 (53%), Gaps = 18/397 (4%)

Query: 93  AVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDV 152
            V  FY +++  G   +    NIL+N F       C E  I +A  +F  +    +RP V
Sbjct: 223 TVWGFYMEILDAGFPLNVYVFNILMNKF-------CKEGNICDAQKVFDEITKRSLRPTV 275

Query: 153 ITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKA 212
           +++ TLING+C+ GNL V  RL   M          ++ ++F+YS +I++LCKE  +D A
Sbjct: 276 VSFNTLINGYCKVGNLDVGFRLKHHMEKSR------TRPDVFTYSALINALCKENKMDGA 329

Query: 213 KELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDC 272
             LF EM  RG+ P  V+ TTLIHG    G  + +   + +ML  G +P+++ +N +++ 
Sbjct: 330 HRLFYEMCERGLIPNDVIFTTLIHGHSRNGQIDLMKESYQKMLSKGLQPDIVLYNTLVNG 389

Query: 273 LCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHT 332
            CK G +  A  +++ MI+RGL PD+ TY +L+DG+C  G +DTA EI   M   G +  
Sbjct: 390 FCKNGDLVAARNIVDGMIRRGLRPDKVTYTTLIDGFCRGGDVDTALEIRKEMDQNGIELD 449

Query: 333 VVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFD 392
            V ++ LI G CK   V +A    R+++  G++   +TY  ++    + G A    KL  
Sbjct: 450 RVGFSALICGMCKEGRVIDAERALREMLRAGMKPDDVTYTMMMDAFCKKGDAQTGFKLLK 509

Query: 393 EMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFH-MLEMNKFEFGIEIFNCLIDGLCKA 451
           EM+     P++ TYN+L++GLCK   ++ A  L   ML +      I  +N L++G    
Sbjct: 510 EMQSDGHIPNVVTYNVLLNGLCKLGQMKNADMLLDAMLNVGVVPDDI-TYNTLLEG---H 565

Query: 452 GRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGK 488
            R  NA + + + P+ G+V  + +Y  +++ L R  K
Sbjct: 566 HRHANASKHYKQKPEIGIVADLASYKSLVNELYRASK 602



 Score =  202 bits (513), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 113/372 (30%), Positives = 201/372 (54%), Gaps = 5/372 (1%)

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
           N++ ++I+++  CKEG +  A+++F E+  R + P VV   TLI+G+C  GN +    L 
Sbjct: 239 NVYVFNILMNKFCKEGNICDAQKVFDEITKRSLRPTVVSFNTLINGYCKVGNLDVGFRLK 298

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
             M     RP++ T++ +I+ LCK  K++ A+ L   M +RGL P+   + +L+ G+   
Sbjct: 299 HHMEKSRTRPDVFTYSALINALCKENKMDGAHRLFYEMCERGLIPNDVIFTTLIHGHSRN 358

Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
           G+ID  +E +  M SKG +  +V YN L+NG+CK  ++  A ++   +I  G+R   +TY
Sbjct: 359 GQIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKVTY 418

Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
            TL+ G  + G    A ++  EM    +E D   ++ LI G+CK   V +A +    +  
Sbjct: 419 TTLIDGFCRGGDVDTALEIRKEMDQNGIELDRVGFSALICGMCKEGRVIDAERALREMLR 478

Query: 432 NKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEK 491
              +     +  ++D  CK G     ++L  ++   G +P VVTY+++++GLC+ G+++ 
Sbjct: 479 AGMKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHIPNVVTYNVLLNGLCKLGQMKN 538

Query: 492 ANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIV 551
           A+  L  M   G  P+ +T+NTL+ G  ++   SK     H   +PE  +V D  ++  +
Sbjct: 539 ADMLLDAMLNVGVVPDDITYNTLLEGHHRHANASK-----HYKQKPEIGIVADLASYKSL 593

Query: 552 VDLLAKDEKYHE 563
           V+ L +  K H 
Sbjct: 594 VNELYRASKDHR 605



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 105/371 (28%), Positives = 185/371 (49%), Gaps = 8/371 (2%)

Query: 199 IIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLG 258
           ++D + K          ++E+   G    V V   L++ FC  GN  +   +F E+    
Sbjct: 211 LLDRMMKLNPTGTVWGFYMEILDAGFPLNVYVFNILMNKFCKEGNICDAQKVFDEITKRS 270

Query: 259 PRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAR 318
            RP +++FN +I+  CK G ++    L   M +    PD FTY++L++  C   ++D A 
Sbjct: 271 LRPTVVSFNTLINGYCKVGNLDVGFRLKHHMEKSRTRPDVFTYSALINALCKENKMDGAH 330

Query: 319 EIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGL 378
            +F  M  +G     V +  LI+G+ +   ++     Y++++S G++  ++ YNTL++G 
Sbjct: 331 RLFYEMCERGLIPNDVIFTTLIHGHSRNGQIDLMKESYQKMLSKGLQPDIVLYNTLVNGF 390

Query: 379 FQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGI 438
            + G    A+ + D M    + PD  TY  LIDG C+   V  A+++   ++ N  E   
Sbjct: 391 CKNGDLVAARNIVDGMIRRGLRPDKVTYTTLIDGFCRGGDVDTALEIRKEMDQNGIELDR 450

Query: 439 EIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLY 498
             F+ LI G+CK GR+ +A     ++ + G+ P  VTY++M+   C+KG  +     L  
Sbjct: 451 VGFSALICGMCKEGRVIDAERALREMLRAGMKPDDVTYTMMMDAFCKKGDAQTGFKLLKE 510

Query: 499 MEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKD 558
           M+ +G  PNVVT+N L++G  +  +      LL  M      +VPDD T++ ++      
Sbjct: 511 MQSDGHIPNVVTYNVLLNGLCKLGQMKNADMLLDAMLNV--GVVPDDITYNTLL------ 562

Query: 559 EKYHECSAVSK 569
           E +H  +  SK
Sbjct: 563 EGHHRHANASK 573



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 113/375 (30%), Positives = 182/375 (48%), Gaps = 18/375 (4%)

Query: 41  LNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRK 100
            N  +++ CK G  N+ +A+  F  +T     P + SFN L     K  + D        
Sbjct: 243 FNILMNKFCKEG--NICDAQKVFDEITKRSLRPTVVSFNTLINGYCKVGNLDVGFRLKHH 300

Query: 101 LVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLIN 160
           +      PD  T + LIN        LC EN++  A  LF  M   G+ P+ + + TLI+
Sbjct: 301 MEKSRTRPDVFTYSALIN-------ALCKENKMDGAHRLFYEMCERGLIPNDVIFTTLIH 353

Query: 161 GFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMK 220
           G  R G + +    ++KM+S     GL  + +I  Y+ +++  CK G +  A+ +   M 
Sbjct: 354 GHSRNGQIDLMKESYQKMLS----KGL--QPDIVLYNTLVNGFCKNGDLVAARNIVDGMI 407

Query: 221 GRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKIN 280
            RG+ P  V  TTLI GFC  G+ +    +  EM   G   + + F+ +I  +CK G++ 
Sbjct: 408 RRGLRPDKVTYTTLIDGFCRGGDVDTALEIRKEMDQNGIELDRVGFSALICGMCKEGRVI 467

Query: 281 EANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILI 340
           +A   L  M++ G+ PD  TY  +MD +C  G   T  ++   M S G    VV+YN+L+
Sbjct: 468 DAERALREMLRAGMKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHIPNVVTYNVLL 527

Query: 341 NGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVE 400
           NG CK+  ++ A  L   +++ GV    ITYNTLL G  +   A    K + +     + 
Sbjct: 528 NGLCKLGQMKNADMLLDAMLNVGVVPDDITYNTLLEGHHRHANAS---KHYKQKPEIGIV 584

Query: 401 PDLSTYNILIDGLCK 415
            DL++Y  L++ L +
Sbjct: 585 ADLASYKSLVNELYR 599



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 32/142 (22%), Positives = 63/142 (44%), Gaps = 2/142 (1%)

Query: 419 VQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSI 478
           + + ++ F +   + F   I     L+D + K       W  + ++   G    V  ++I
Sbjct: 186 IPDVIQCFRLSRKHNFVVPIRGCGNLLDRMMKLNPTGTVWGFYMEILDAGFPLNVYVFNI 245

Query: 479 MIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPE 538
           +++  C++G +  A      + K    P VV+FNTL++G+ +         L H M +  
Sbjct: 246 LMNKFCKEGNICDAQKVFDEITKRSLRPTVVSFNTLINGYCKVGNLDVGFRLKHHMEKSR 305

Query: 539 RNLVPDDTTFSIVVDLLAKDEK 560
               PD  T+S +++ L K+ K
Sbjct: 306 TR--PDVFTYSALINALCKENK 325


>gi|255574927|ref|XP_002528370.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223532238|gb|EEF34042.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 712

 Score =  215 bits (547), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 133/491 (27%), Positives = 236/491 (48%), Gaps = 25/491 (5%)

Query: 56  LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNI 115
           ++ A   F  M      P  +S+ L+     +      V  + + ++  G   D  T  +
Sbjct: 209 VDYAEKVFDEMLDRAVVPDSTSYKLMVVGYCRMGRISDVDRWLKDMIERGYAVDNATCTL 268

Query: 116 LINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLH 175
           +I+ F   E+G      +  A W FK  +  G+ P++I + +LING C+ G++  A  + 
Sbjct: 269 MISTFS--EKGF-----VNRAFWYFKKWVQMGLNPNLINFSSLINGLCKIGSIKQAFEML 321

Query: 176 KKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEM-KGRGINPAVVVCTTL 234
           ++MV   +      K N+++++ +ID LCK+G  +KA  LFL++ +     P V   T +
Sbjct: 322 EEMVRKGW------KPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVYTYTCM 375

Query: 235 IHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGL 294
           I+G+C          L I M + G  PN  T+  +ID  CK G    A  L++LM + G 
Sbjct: 376 INGYCKEEKLNRAEMLLIRMKEQGLVPNTNTYTCLIDGHCKAGNFGRAYELMDLMGKEGF 435

Query: 295 NPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMS 354
            P+ FTYN+++DG C  GR   A ++       G     V+Y ILI+ +C+  + ++A++
Sbjct: 436 TPNIFTYNAIIDGLCKKGRFPEAYKLLRRGLKSGLHADKVTYTILISEFCRQTDNKQALA 495

Query: 355 LYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLC 414
           ++ ++   G++  + TYN L++   +  +   ++KLF+E     + P   TY  +I G C
Sbjct: 496 IFSRMFKVGLQPDMHTYNVLIATFCRQKKVEESEKLFEEAVGLGLLPTKETYTSMICGYC 555

Query: 415 KNNCVQEAVKLFHMLEMNKFEFGIE----IFNCLIDGLCKAGRLDNAWELFHKLPQKGLV 470
           ++  +  A+K FH +     ++G +     +  LI GLC   +LD A +L+  +   GL 
Sbjct: 556 RDGHISSAIKFFHKMR----DYGCKPDSITYGALISGLCNESKLDEACQLYETMIDNGLS 611

Query: 471 PTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVEL 530
           P  VT   + +  C++G    A   L  +EK      + T NTL+       K       
Sbjct: 612 PCEVTRVTLAYEYCKQGDSATAMIILERLEKKLW---IRTVNTLIRKLCSEKKVGVAALF 668

Query: 531 LHKMAEPERNL 541
            HK+ + + N+
Sbjct: 669 FHKLLDKDLNV 679



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 136/444 (30%), Positives = 220/444 (49%), Gaps = 23/444 (5%)

Query: 97  FYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYG 156
           +++K V +GL P+ +  + LIN       GLC    IK+A  + + M+  G +P+V T+ 
Sbjct: 285 YFKKWVQMGLNPNLINFSSLIN-------GLCKIGSIKQAFEMLEEMVRKGWKPNVYTHT 337

Query: 157 TLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELF 216
            LI+G C+ G    A RL  K+V  D       K N+++Y+ +I+  CKE  +++A+ L 
Sbjct: 338 ALIDGLCKKGWTEKAFRLFLKLVRSDN-----YKPNVYTYTCMINGYCKEEKLNRAEMLL 392

Query: 217 LEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDL----GPRPNLLTFNVMIDC 272
           + MK +G+ P     T LI G C AGN+    G   E++DL    G  PN+ T+N +ID 
Sbjct: 393 IRMKEQGLVPNTNTYTCLIDGHCKAGNF----GRAYELMDLMGKEGFTPNIFTYNAIIDG 448

Query: 273 LCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHT 332
           LCK G+  EA  LL   ++ GL+ D+ TY  L+  +C       A  IF  M   G +  
Sbjct: 449 LCKKGRFPEAYKLLRRGLKSGLHADKVTYTILISEFCRQTDNKQALAIFSRMFKVGLQPD 508

Query: 333 VVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFD 392
           + +YN+LI  +C+   VEE+  L+ + +  G+  T  TY +++ G  + G    A K F 
Sbjct: 509 MHTYNVLIATFCRQKKVEESEKLFEEAVGLGLLPTKETYTSMICGYCRDGHISSAIKFFH 568

Query: 393 EMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAG 452
           +M+ Y  +PD  TY  LI GLC  + + EA +L+  +  N           L    CK G
Sbjct: 569 KMRDYGCKPDSITYGALISGLCNESKLDEACQLYETMIDNGLSPCEVTRVTLAYEYCKQG 628

Query: 453 RLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFN 512
               A  +  +L +K  + TV T   +I  LC + K+  A  F   +       + +T  
Sbjct: 629 DSATAMIILERLEKKLWIRTVNT---LIRKLCSEKKVGVAALFFHKLLDKDLNVDRITLA 685

Query: 513 TLMHGFLQNNKTSKVVELLHKMAE 536
                  ++NK + V +L  ++++
Sbjct: 686 AFTTACYESNKFALVSDLSERISK 709



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 114/396 (28%), Positives = 196/396 (49%), Gaps = 9/396 (2%)

Query: 158 LINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFL 217
           ++  F   G L  A+ +  +M +    +GL+ K  I ++  +ID     G VD A+++F 
Sbjct: 164 MVRSFSEIGKLKEAVNMVIEMQN----HGLVLKARILNF--VIDVALALGFVDYAEKVFD 217

Query: 218 EMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGG 277
           EM  R + P       ++ G+C  G   +V+    +M++ G   +  T  +MI    + G
Sbjct: 218 EMLDRAVVPDSTSYKLMVVGYCRMGRISDVDRWLKDMIERGYAVDNATCTLMISTFSEKG 277

Query: 278 KINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYN 337
            +N A    +  +Q GLNP+   ++SL++G C +G I  A E+   M  KG K  V ++ 
Sbjct: 278 FVNRAFWYFKKWVQMGLNPNLINFSSLINGLCKIGSIKQAFEMLEEMVRKGWKPNVYTHT 337

Query: 338 ILINGYCKILNVEEAMSLYRQII-SNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKL 396
            LI+G CK    E+A  L+ +++ S+  +  V TY  +++G  +  +   A+ L   MK 
Sbjct: 338 ALIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVYTYTCMINGYCKEEKLNRAEMLLIRMKE 397

Query: 397 YNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDN 456
             + P+ +TY  LIDG CK      A +L  ++    F   I  +N +IDGLCK GR   
Sbjct: 398 QGLVPNTNTYTCLIDGHCKAGNFGRAYELMDLMGKEGFTPNIFTYNAIIDGLCKKGRFPE 457

Query: 457 AWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMH 516
           A++L  +  + GL    VTY+I+I   CR+   ++A      M K G  P++ T+N L+ 
Sbjct: 458 AYKLLRRGLKSGLHADKVTYTILISEFCRQTDNKQALAIFSRMFKVGLQPDMHTYNVLIA 517

Query: 517 GFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVV 552
            F +  K  +  +L  +       L+P   T++ ++
Sbjct: 518 TFCRQKKVEESEKLFEEAV--GLGLLPTKETYTSMI 551



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 86/354 (24%), Positives = 173/354 (48%), Gaps = 3/354 (0%)

Query: 224 INPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEAN 283
           ++ A  V   ++  F   G  +E   + IEM + G        N +ID     G ++ A 
Sbjct: 154 LDRATEVMQCMVRSFSEIGKLKEAVNMVIEMQNHGLVLKARILNFVIDVALALGFVDYAE 213

Query: 284 GLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGY 343
            + + M+ R + PD  +Y  ++ GYC +GRI         M  +G      +  ++I+ +
Sbjct: 214 KVFDEMLDRAVVPDSTSYKLMVVGYCRMGRISDVDRWLKDMIERGYAVDNATCTLMISTF 273

Query: 344 CKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDL 403
            +   V  A   +++ +  G+   +I +++L++GL + G    A ++ +EM     +P++
Sbjct: 274 SEKGFVNRAFWYFKKWVQMGLNPNLINFSSLINGLCKIGSIKQAFEMLEEMVRKGWKPNV 333

Query: 404 STYNILIDGLCKNNCVQEAVKLF-HMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFH 462
            T+  LIDGLCK    ++A +LF  ++  + ++  +  + C+I+G CK  +L+ A  L  
Sbjct: 334 YTHTALIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVYTYTCMINGYCKEEKLNRAEMLLI 393

Query: 463 KLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNN 522
           ++ ++GLVP   TY+ +I G C+ G   +A + +  M K G  PN+ T+N ++ G  +  
Sbjct: 394 RMKEQGLVPNTNTYTCLIDGHCKAGNFGRAYELMDLMGKEGFTPNIFTYNAIIDGLCKKG 453

Query: 523 KTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKSSYRACL 576
           +  +  +LL +  +    L  D  T++I++    +     +  A+    ++  L
Sbjct: 454 RFPEAYKLLRRGLKS--GLHADKVTYTILISEFCRQTDNKQALAIFSRMFKVGL 505


>gi|125548610|gb|EAY94432.1| hypothetical protein OsI_16202 [Oryza sativa Indica Group]
 gi|125590647|gb|EAZ30997.1| hypothetical protein OsJ_15079 [Oryza sativa Japonica Group]
          Length = 485

 Score =  215 bits (547), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 129/436 (29%), Positives = 223/436 (51%), Gaps = 30/436 (6%)

Query: 105 GLLPDFLTLNIL----------INCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVIT 154
           GLLPD  TL +L           +C G   R         EA   +  ++  G+ P+   
Sbjct: 63  GLLPDACTLVLLALRRGIRLEPTSCTGLMSRFPTA----PEACAFYLQLLDAGLPPEAKL 118

Query: 155 YGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKE 214
           +  L+    R G L+ A  +  +M S     G+  +  + S++ +I  +C+ G +D A+ 
Sbjct: 119 FNVLMRDLVRLGELASAQNVFDEMQS----RGV--RRTVVSFNTMISGMCRAGDLDGAET 172

Query: 215 LFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLC 274
           L   M   G+ P V     LI G C  G  E+  G+F +M   G +PN + F ++ID  C
Sbjct: 173 LHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHC 232

Query: 275 KGGKINEANGLLEL---MIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKH 331
           K G   +A  +LEL   M +RG+ PD  TYN++++G C    + +A  I + M S G + 
Sbjct: 233 KKG---DAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRP 289

Query: 332 TVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLF 391
             V+Y  LI+GYCK   ++ AM + + +++ GV    +TY  L+SGL +AG++  A+++ 
Sbjct: 290 DTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVL 349

Query: 392 DEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKA 451
            EM    +EPD +TY ++ID  C+   V+  ++L   ++    + G+  +N +++G CK 
Sbjct: 350 GEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNGFCKL 409

Query: 452 GRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTF 511
           G++ NA  L + +   G+ P  +TY+I++ G C+ GK+    D        G  P++  +
Sbjct: 410 GQMKNADMLLNAMINIGVSPDDITYNILLDGHCKHGKV---TDIEELKSAKGTVPDLGVY 466

Query: 512 NTLMHGFLQNNKTSKV 527
            +++ G +   KT+K 
Sbjct: 467 TSIV-GEIVKKKTTKT 481



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 109/343 (31%), Positives = 176/343 (51%), Gaps = 2/343 (0%)

Query: 211 KAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMI 270
           +A   +L++   G+ P   +   L+      G       +F EM   G R  +++FN MI
Sbjct: 99  EACAFYLQLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMI 158

Query: 271 DCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCK 330
             +C+ G ++ A  L   M + G+ PD +TY +L+ G C VGRI+ AR +F  M  +G K
Sbjct: 159 SGMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMK 218

Query: 331 HTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKL 390
              V + ILI+ +CK  + E  + L+R++   GVR   +TYN +++GL +A     A  +
Sbjct: 219 PNAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGI 278

Query: 391 FDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCK 450
             EM+   + PD  TY  LIDG CK   +  A+++   +           +  LI GL K
Sbjct: 279 VVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSK 338

Query: 451 AGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVT 510
           AGR  +A  +  ++ + GL P   TY+++I   CRKG ++     L  M+  G  P VVT
Sbjct: 339 AGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVT 398

Query: 511 FNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
           +N +M+GF +  +      LL+ M      + PDD T++I++D
Sbjct: 399 YNVIMNGFCKLGQMKNADMLLNAMINI--GVSPDDITYNILLD 439



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 109/392 (27%), Positives = 190/392 (48%), Gaps = 23/392 (5%)

Query: 37  PETQL-NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVI 95
           PE +L N  + +  + G   L  A+  F  M        + SFN +   + +    D   
Sbjct: 114 PEAKLFNVLMRDLVRLG--ELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGAE 171

Query: 96  SFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITY 155
           + +R++   G+ PD  T   LI       +GLC   RI++A  +F+ M   G++P+ + +
Sbjct: 172 TLHRRMSEAGVTPDVYTYGALI-------QGLCRVGRIEDARGVFEKMCGRGMKPNAVVF 224

Query: 156 GTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKEL 215
             LI+  C+ G+    L LH++M     E G+  + +  +Y+ I++ LC+   +  A  +
Sbjct: 225 TILIDAHCKKGDAETMLELHREM----RERGV--RPDAVTYNAIVNGLCRARDLKSASGI 278

Query: 216 FLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCK 275
            +EM+  G+ P  V  TTLI G+C     +    +   M+  G   + +T+  +I  L K
Sbjct: 279 VVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSK 338

Query: 276 GGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVS 335
            G+  +A  +L  M++ GL PD  TY  ++D +C  G + T   +   M +KG K  VV+
Sbjct: 339 AGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVT 398

Query: 336 YNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMK 395
           YN+++NG+CK+  ++ A  L   +I+ GV    ITYN LL G  + G+    ++L     
Sbjct: 399 YNVIMNGFCKLGQMKNADMLLNAMINIGVSPDDITYNILLDGHCKHGKVTDIEEL---KS 455

Query: 396 LYNVEPDLSTYNILIDGLCKNNCVQEAVKLFH 427
                PDL  Y  ++  + K    ++  K +H
Sbjct: 456 AKGTVPDLGVYTSIVGEIVK----KKTTKTYH 483



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 80/294 (27%), Positives = 149/294 (50%), Gaps = 11/294 (3%)

Query: 277 GKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTARE---IFLSMHSKGCKHTV 333
           G + +A  L+ L ++RG+  +  +   LM       R  TA E    +L +   G     
Sbjct: 63  GLLPDACTLVLLALRRGIRLEPTSCTGLMS------RFPTAPEACAFYLQLLDAGLPPEA 116

Query: 334 VSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDE 393
             +N+L+    ++  +  A +++ ++ S GVR+TV+++NT++SG+ +AG    A+ L   
Sbjct: 117 KLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGAETLHRR 176

Query: 394 MKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGR 453
           M    V PD+ TY  LI GLC+   +++A  +F  +     +    +F  LID  CK G 
Sbjct: 177 MSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKGD 236

Query: 454 LDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNT 513
            +   EL  ++ ++G+ P  VTY+ +++GLCR   L+ A+  ++ M   G  P+ VT+ T
Sbjct: 237 AETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTVTYTT 296

Query: 514 LMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAV 567
           L+ G+ +  +    +E+   M      L  D+ T++ ++  L+K  +  +   V
Sbjct: 297 LIDGYCKEEELDMAMEIKQNMVAEGVGL--DEVTYTALISGLSKAGRSADAERV 348


>gi|297746072|emb|CBI16128.3| unnamed protein product [Vitis vinifera]
          Length = 563

 Score =  214 bits (546), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 143/476 (30%), Positives = 236/476 (49%), Gaps = 21/476 (4%)

Query: 68  HMQPSPPISSF--NLLFGAVAKNRHY-----DAVISFYRKLVSIGLLPDFLTLNILINCF 120
           H    P + SF  ++L      N H      +  + ++ +++  GL+P   T N L+   
Sbjct: 81  HELTQPHLDSFPTHVLIHEAIINAHVRSQLPEQALFYFNQMIGRGLVPGSNTFNNLLI-- 138

Query: 121 GNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVS 180
                 L +++   E  W   N     V+ DV ++G +I G C  G L     +  +M  
Sbjct: 139 ------LLIKSNFFEKAWRVFNETKGNVKLDVYSFGIMIKGCCEVGYLDKGFEVLGQM-- 190

Query: 181 GDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCC 240
              E GL    N+  Y+ +ID  CK G +++ K+LF +M    +       T LI+GF  
Sbjct: 191 --EEMGL--SPNVVVYTTLIDGCCKNGDIERGKQLFYKMGELDVVANQYTYTVLINGFFK 246

Query: 241 AGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFT 300
            G  ++   L+ +M   G  PN+ T+N MI   C  GK+N A  L + M +RG+  +  T
Sbjct: 247 MGLKKDGIELYEKMKLTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEMRERGVACNVVT 306

Query: 301 YNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQII 360
           YN+L+ G C   R+  A  +   M   G    ++SYN LI+GYC I N+++A SL+ Q+ 
Sbjct: 307 YNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMK 366

Query: 361 SNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQ 420
           S+G   ++ TYN L++G  +A  +     +  EM+   + P   TY IL+D L +++ ++
Sbjct: 367 SSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTILMDALVRSDNIE 426

Query: 421 EAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMI 480
           +A +++  +E       I I+  LI GLC  G +  A +LF  L +  L P  V Y+ MI
Sbjct: 427 KAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMHLKPNDVIYNTMI 486

Query: 481 HGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAE 536
           +G C++G   +A   L  M +NG  PNV ++N+ +    ++ K ++   LL  M E
Sbjct: 487 YGYCKEGSSYRALRLLKEMGENGMVPNVASYNSTIQILCKDEKWTEAEVLLKDMIE 542



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 129/436 (29%), Positives = 225/436 (51%), Gaps = 9/436 (2%)

Query: 134 KEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNI 193
           ++A + F  MI  G+ P   T+  L+    ++     A R+  +   G+       K ++
Sbjct: 112 EQALFYFNQMIGRGLVPGSNTFNNLLILLIKSNFFEKAWRVFNE-TKGNV------KLDV 164

Query: 194 FSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIE 253
           +S+ I+I   C+ G +DK  E+  +M+  G++P VVV TTLI G C  G+ E    LF +
Sbjct: 165 YSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKNGDIERGKQLFYK 224

Query: 254 MLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGR 313
           M +L    N  T+ V+I+   K G   +   L E M   G+ P+ +TYNS++   C  G+
Sbjct: 225 MGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYNSMICRCCNDGK 284

Query: 314 IDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNT 373
           ++ A E+F  M  +G    VV+YN LI G C+   V EA  L  ++  +G+   +I+YNT
Sbjct: 285 LNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISYNT 344

Query: 374 LLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNK 433
           L+ G    G    A  LF++MK     P L+TYNILI G  +         +   +E   
Sbjct: 345 LIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEARG 404

Query: 434 FEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKAN 493
                  +  L+D L ++  ++ A++++  + + GLV  +  Y ++IHGLC  G +++A+
Sbjct: 405 LSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEAS 464

Query: 494 DFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
                +++    PN V +NT+++G+ +   + + + LL +M E    +VP+  +++  + 
Sbjct: 465 KLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGE--NGMVPNVASYNSTIQ 522

Query: 554 LLAKDEKYHECSAVSK 569
           +L KDEK+ E   + K
Sbjct: 523 ILCKDEKWTEAEVLLK 538



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 129/464 (27%), Positives = 224/464 (48%), Gaps = 14/464 (3%)

Query: 58  EARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILI 117
           +A ++F  M      P  ++FN L   + K+  ++     + +            + + +
Sbjct: 113 QALFYFNQMIGRGLVPGSNTFNNLLILLIKSNFFEKAWRVFNETKG--------NVKLDV 164

Query: 118 NCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKK 177
             FG   +G C    + +   +   M   G+ P+V+ Y TLI+G C+ G++    +L  K
Sbjct: 165 YSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKNGDIERGKQLFYK 224

Query: 178 MVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHG 237
           M   D         N ++Y+++I+   K GL     EL+ +MK  GI P V    ++I  
Sbjct: 225 MGELDV------VANQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYNSMICR 278

Query: 238 FCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPD 297
            C  G       LF EM + G   N++T+N +I  LC+  ++ EA  L+  M + GL+P+
Sbjct: 279 CCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPN 338

Query: 298 RFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYR 357
             +YN+L+DGYC +G +D A  +F  M S G   ++ +YNILI G+ +  N      + R
Sbjct: 339 LISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVR 398

Query: 358 QIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNN 417
           ++ + G+  + +TY  L+  L ++     A +++  M+   +  D+  Y +LI GLC   
Sbjct: 399 EMEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVG 458

Query: 418 CVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYS 477
            ++EA KLF  L+    +    I+N +I G CK G    A  L  ++ + G+VP V +Y+
Sbjct: 459 DMKEASKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYN 518

Query: 478 IMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQN 521
             I  LC+  K  +A   L  M + G  P++  +N +      N
Sbjct: 519 STIQILCKDEKWTEAEVLLKDMIELGLKPSISIWNMISKARFDN 562



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 59/217 (27%), Positives = 105/217 (48%), Gaps = 13/217 (5%)

Query: 53  IINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLT 112
           I NL++A   F  M     SP ++++N+L    ++ ++   V    R++ + GL P  +T
Sbjct: 352 IGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVT 411

Query: 113 LNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVAL 172
             IL++        L   + I++A  ++ +M   G+  D+  YG LI+G C  G++  A 
Sbjct: 412 YTILMD-------ALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEAS 464

Query: 173 RLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCT 232
           +L K +      + +  K N   Y+ +I   CKEG   +A  L  EM   G+ P V    
Sbjct: 465 KLFKSL------DEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYN 518

Query: 233 TLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVM 269
           + I   C    W E   L  +M++LG +P++  +N++
Sbjct: 519 STIQILCKDEKWTEAEVLLKDMIELGLKPSISIWNMI 555


>gi|125575277|gb|EAZ16561.1| hypothetical protein OsJ_32034 [Oryza sativa Japonica Group]
          Length = 526

 Score =  214 bits (546), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 152/489 (31%), Positives = 238/489 (48%), Gaps = 59/489 (12%)

Query: 107 LPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFG--VRPDVITYGTLINGFCR 164
           +PD  + NIL+N       GLC ENR +EA  L   M   G    PDV++Y T+INGF +
Sbjct: 48  IPDVFSYNILLN-------GLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVINGFFK 100

Query: 165 TGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGI 224
            G+L    ++  + +S           N+ +Y+ II +LCK   VDKA E+   M   G+
Sbjct: 101 EGDLD---KMLDQRIS----------PNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGV 147

Query: 225 NPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANG 284
            P  +   +++HGFC +G  +E      +M   G  P+++T+N ++D LCK G+  EA  
Sbjct: 148 MPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARK 207

Query: 285 LLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYC 344
           + + M +RGL PD  TY +L+ GY   G +     +   M   G       ++IL+  Y 
Sbjct: 208 IFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYA 267

Query: 345 KILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLS 404
           K   VEEAM ++ ++   G+    +TY T++  L ++G+   A   F++M    + PD  
Sbjct: 268 KQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSI 327

Query: 405 TYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEI----FNCLIDGLCKAGRL------ 454
            YN LI  LC  +  ++A +LF  LEM   + GI +    FN +ID  CK GR+      
Sbjct: 328 VYNSLIHSLCIFDKWEKAEELF--LEM--LDRGICLSTIFFNSIIDSHCKEGRVIESGKL 383

Query: 455 -------------------DNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDF 495
                              D A +LF      GLVP   TY +M   +  +G LE+ +  
Sbjct: 384 FDLMVRIGVKPDIITLGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQL 443

Query: 496 LLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLL 555
            L ME NGC  +    N ++   LQ  + ++    L  + E   +L  + +T S+ +DLL
Sbjct: 444 FLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSL--EASTASLFIDLL 501

Query: 556 A--KDEKYH 562
           +  K ++YH
Sbjct: 502 SGGKYQEYH 510



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 97/356 (27%), Positives = 180/356 (50%), Gaps = 12/356 (3%)

Query: 210 DKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPR--PNLLTFN 267
           + A+ +F E+  RGI P V     L++G C     +E   L   M D G    P++++++
Sbjct: 34  EDARHVFDELLRRGI-PDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYS 92

Query: 268 VMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSK 327
            +I+   K G +++       M+ + ++P+  TYNS++   C    +D A E+  +M   
Sbjct: 93  TVINGFFKEGDLDK-------MLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKS 145

Query: 328 GCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYA 387
           G     ++YN +++G+C     +EA+   +++ S+GV   V+TYN+L+  L + G+   A
Sbjct: 146 GVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEA 205

Query: 388 QKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDG 447
           +K+FD M    ++PD++TY  L+ G      + E   L  ++  N       +F+ L+  
Sbjct: 206 RKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCA 265

Query: 448 LCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPN 507
             K  +++ A  +F K+ Q+GL P  VTY  +I  LC+ G++E A  +   M   G  P+
Sbjct: 266 YAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPD 325

Query: 508 VVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
            + +N+L+H     +K  K  EL  +M   +R +      F+ ++D   K+ +  E
Sbjct: 326 SIVYNSLIHSLCIFDKWEKAEELFLEML--DRGICLSTIFFNSIIDSHCKEGRVIE 379



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 110/405 (27%), Positives = 177/405 (43%), Gaps = 36/405 (8%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
           N  +H  C SG     EA  F   M      P + ++N L   + KN         +  +
Sbjct: 155 NSIVHGFCSSG--QPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSM 212

Query: 102 VSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLING 161
              GL PD  T   L+       +G   +  + E   L   M+  G+ P+   +  L+  
Sbjct: 213 TKRGLKPDITTYGTLL-------QGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCA 265

Query: 162 FCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKG 221
           + +   +  A+ +  KM     + GL    N  +Y  +ID LCK G V+ A   F +M  
Sbjct: 266 YAKQEKVEEAMLVFSKM----RQQGL--NPNAVTYGTVIDVLCKSGRVEDAMLYFEQMID 319

Query: 222 RGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINE 281
            G+ P  +V  +LIH  C    WE+   LF+EMLD G   + + FN +ID  CK G++ E
Sbjct: 320 EGLRPDSIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGRVIE 379

Query: 282 ANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILIN 341
           +  L +LM++ G+ PD  T          +GR D A+++F++  S G      +Y ++  
Sbjct: 380 SGKLFDLMVRIGVKPDIIT----------LGRNDEAKDLFVAFSSNGLVPNYWTYRLMAE 429

Query: 342 GYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQ---AGYAQKLFDEMKLYN 398
                  +EE   L+  +  NG        N ++  L Q G+   AG    + DE K ++
Sbjct: 430 NIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDE-KHFS 488

Query: 399 VEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNC 443
           +E   ST ++ ID L      QE    +H+    K++  IE  +C
Sbjct: 489 LEA--STASLFID-LLSGGKYQE----YHIFLPEKYKSFIESLSC 526


>gi|356520989|ref|XP_003529141.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like [Glycine max]
          Length = 682

 Score =  214 bits (546), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 152/556 (27%), Positives = 273/556 (49%), Gaps = 54/556 (9%)

Query: 32  AAVSSPETQ-LNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRH 90
           AA  SP  +  N  +   CK G     + R    +M     SP   ++  L G VAK+  
Sbjct: 141 AARVSPNVETYNVLMKVMCKKG--EFEKGRGLLTWMWGAGMSPDRITYGTLIGGVAKSGD 198

Query: 91  YDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATW--LFKNMIAFGV 148
               +  + ++   G+ PD +  N++I+ F   +RG  V+       W  L +  + F  
Sbjct: 199 LGFALEVFDEMRERGVEPDVVCYNMIIDGF--FKRGDFVK---AGEMWERLLREELVF-- 251

Query: 149 RPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGL 208
            P V++Y  +I+G C+ G  S  L + ++M   +       K ++F+YS +I  L + G 
Sbjct: 252 -PSVVSYNVMISGLCKCGRFSEGLEIWERMKKNE------RKCDLFTYSALIHGLSEAGD 304

Query: 209 VDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGN-------WEE--------------- 246
           +  A++++ EM GRG+ P VV C  +++G C AGN       WEE               
Sbjct: 305 LGGARKVYEEMVGRGVRPDVVTCNAMLNGLCKAGNVEECFELWEEMGKCSLRNVRSYNIF 364

Query: 247 VNGLF--------IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQR--GLNP 296
           + GLF        + + D     +  T+ V++  LC  G +N A  +LE    R  G++ 
Sbjct: 365 LKGLFENGKVDDAMMLWDGLLEADSATYGVVVHGLCWNGYVNRALQVLEEAEHREGGMDV 424

Query: 297 DRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLY 356
           D F Y+SL++  C  GR+D A  +   M+ +GCK      N+LI+G+ K   ++ A+ ++
Sbjct: 425 DEFAYSSLINALCKEGRLDEADGVVELMNKRGCKFNSHVCNVLIDGFVKHSKLDSAVKVF 484

Query: 357 RQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKN 416
           R++   G   TV++YN L++GL +A +   A    +EM     +PD+ TY+ LI GL ++
Sbjct: 485 REMSGKGCSLTVVSYNILINGLLRAERFREAYDCVNEMLEKGWKPDIITYSTLIGGLYES 544

Query: 417 NCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTY 476
           N +  A++L+H       +  I ++N +I  LC +G++++A +L+  L QK  V  +VT+
Sbjct: 545 NMMDAALRLWHQFLDTGHKPDIIMYNIVIHRLCSSGKVEDALQLYSTLRQKKCV-NLVTH 603

Query: 477 SIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAE 536
           + ++ G  + G  E A+    ++ ++   P+++++N  + G     + +  V  L     
Sbjct: 604 NTIMEGFYKVGNCEMASKIWAHILEDELQPDIISYNITLKGLCSCGRVTDAVGFLDDAL- 662

Query: 537 PERNLVPDDTTFSIVV 552
             R  +P   T++I+V
Sbjct: 663 -VRGFLPTAITWNILV 677



 Score =  205 bits (521), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 161/581 (27%), Positives = 265/581 (45%), Gaps = 98/581 (16%)

Query: 24  LFKSPRQIAAV--SSPETQLNEFLHENCKSGIINLNEARYFFGYMTHM-QPSPPISSFNL 80
           L  +PR IAA+    PE      L    K+ + N  EA + F  M H+   SP I SFN 
Sbjct: 61  LAHAPRIIAAIHCPCPEDVPLTLLKAYAKTRMPN--EALHVFQTMPHVFGCSPTIRSFNT 118

Query: 81  LFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLF 140
           L  A  ++  +    +F++   +  + P+  T N+L+         +C +   ++   L 
Sbjct: 119 LLNAFVESHQWARAENFFKYFEAARVSPNVETYNVLMKV-------MCKKGEFEKGRGLL 171

Query: 141 KNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIII 200
             M   G+ PD ITYGTLI G                                       
Sbjct: 172 TWMWGAGMSPDRITYGTLIGG--------------------------------------- 192

Query: 201 DSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEML-DLGP 259
             + K G +  A E+F EM+ RG+ P VV    +I GF   G++ +   ++  +L +   
Sbjct: 193 --VAKSGDLGFALEVFDEMRERGVEPDVVCYNMIIDGFFKRGDFVKAGEMWERLLREELV 250

Query: 260 RPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTARE 319
            P+++++NVMI  LCK G+ +E   + E M +     D FTY++L+ G    G +  AR+
Sbjct: 251 FPSVVSYNVMISGLCKCGRFSEGLEIWERMKKNERKCDLFTYSALIHGLSEAGDLGGARK 310

Query: 320 IFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLF 379
           ++  M  +G +  VV+ N ++NG CK  NVEE   L+ ++    +R  V +YN  L GLF
Sbjct: 311 VYEEMVGRGVRPDVVTCNAMLNGLCKAGNVEECFELWEEMGKCSLRN-VRSYNIFLKGLF 369

Query: 380 QAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLE--------- 430
           + G+   A  L+D +    +E D +TY +++ GLC N  V  A+++    E         
Sbjct: 370 ENGKVDDAMMLWDGL----LEADSATYGVVVHGLCWNGYVNRALQVLEEAEHREGGMDVD 425

Query: 431 --------------------------MNKF--EFGIEIFNCLIDGLCKAGRLDNAWELFH 462
                                     MNK   +F   + N LIDG  K  +LD+A ++F 
Sbjct: 426 EFAYSSLINALCKEGRLDEADGVVELMNKRGCKFNSHVCNVLIDGFVKHSKLDSAVKVFR 485

Query: 463 KLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNN 522
           ++  KG   TVV+Y+I+I+GL R  +  +A D +  M + G  P+++T++TL+ G  ++N
Sbjct: 486 EMSGKGCSLTVVSYNILINGLLRAERFREAYDCVNEMLEKGWKPDIITYSTLIGGLYESN 545

Query: 523 KTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
                + L H+  +      PD   ++IV+  L    K  +
Sbjct: 546 MMDAALRLWHQFLDTGHK--PDIIMYNIVIHRLCSSGKVED 584



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 125/449 (27%), Positives = 224/449 (49%), Gaps = 21/449 (4%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
           P + S+N++   + K   +   +  + ++       D  T + LI+       GL     
Sbjct: 252 PSVVSYNVMISGLCKCGRFSEGLEIWERMKKNERKCDLFTYSALIH-------GLSEAGD 304

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
           +  A  +++ M+  GVRPDV+T   ++NG C+ GN+     L ++M       G  S  N
Sbjct: 305 LGGARKVYEEMVGRGVRPDVVTCNAMLNGLCKAGNVEECFELWEEM-------GKCSLRN 357

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF- 251
           + SY+I +  L + G VD A  L+  +    +         ++HG C  G       +  
Sbjct: 358 VRSYNIFLKGLFENGKVDDAMMLWDGL----LEADSATYGVVVHGLCWNGYVNRALQVLE 413

Query: 252 -IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCL 310
             E  + G   +   ++ +I+ LCK G+++EA+G++ELM +RG   +    N L+DG+  
Sbjct: 414 EAEHREGGMDVDEFAYSSLINALCKEGRLDEADGVVELMNKRGCKFNSHVCNVLIDGFVK 473

Query: 311 VGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVIT 370
             ++D+A ++F  M  KGC  TVVSYNILING  +     EA     +++  G +  +IT
Sbjct: 474 HSKLDSAVKVFREMSGKGCSLTVVSYNILINGLLRAERFREAYDCVNEMLEKGWKPDIIT 533

Query: 371 YNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLE 430
           Y+TL+ GL+++     A +L+ +      +PD+  YNI+I  LC +  V++A++L+  L 
Sbjct: 534 YSTLIGGLYESNMMDAALRLWHQFLDTGHKPDIIMYNIVIHRLCSSGKVEDALQLYSTLR 593

Query: 431 MNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLE 490
             K    +   N +++G  K G  + A +++  + +  L P +++Y+I + GLC  G++ 
Sbjct: 594 QKKC-VNLVTHNTIMEGFYKVGNCEMASKIWAHILEDELQPDIISYNITLKGLCSCGRVT 652

Query: 491 KANDFLLYMEKNGCAPNVVTFNTLMHGFL 519
            A  FL      G  P  +T+N L+   +
Sbjct: 653 DAVGFLDDALVRGFLPTAITWNILVRAVI 681


>gi|224067108|ref|XP_002302359.1| predicted protein [Populus trichocarpa]
 gi|222844085|gb|EEE81632.1| predicted protein [Populus trichocarpa]
          Length = 375

 Score =  214 bits (546), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 117/351 (33%), Positives = 193/351 (54%), Gaps = 14/351 (3%)

Query: 150 PDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLV 209
           PDVITY  LI   C    +  A++L  +M S         K ++ +Y+++++ +CKEG +
Sbjct: 14  PDVITYTILIEATCAESGVGQAMKLLDEMGSRG------CKPDVVTYNVLVNGMCKEGRL 67

Query: 210 DKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVM 269
           D+A +    M   G  P V+    ++   C  G W +   L  EM+  G  P+++TFN++
Sbjct: 68  DEAIKFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVVTFNIL 127

Query: 270 IDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGC 329
           I+ LC+ G +  A  +LE M   G  P+  +YN L+ G+C   ++D A +    M S+GC
Sbjct: 128 INFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSRGC 187

Query: 330 KHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQK 389
              +V+YN ++   CK   V+ A+ L  Q+ S G    +ITYNT++ GL + G+   A +
Sbjct: 188 YPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAVE 247

Query: 390 LFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIE----IFNCLI 445
           L  EM+   ++PD+ TY+ LI GL +   V+EA+K FH +E     FG++     +N ++
Sbjct: 248 LLHEMRGKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVE----GFGVKPNAFTYNSIM 303

Query: 446 DGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFL 496
            GLCKA + D A +    +  KG  PT V+Y+I+I G+  +G  ++A + L
Sbjct: 304 FGLCKAQQTDRAIDFLAYMISKGCKPTEVSYTILIEGIANEGLAKEALELL 354



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 112/363 (30%), Positives = 195/363 (53%), Gaps = 2/363 (0%)

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
           ++ +Y+I+I++ C E  V +A +L  EM  RG  P VV    L++G C  G  +E     
Sbjct: 15  DVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGMCKEGRLDEAIKFL 74

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
             M   G +PN++T N+++  +C  G+  +A  LL  M+++G +P   T+N L++  C  
Sbjct: 75  NSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVVTFNILINFLCRK 134

Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
           G +  A +I   M + GC    +SYN L++G+CK   ++ A+     ++S G    ++TY
Sbjct: 135 GLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSRGCYPDIVTY 194

Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
           NT+L+ L + G+   A +L +++      P L TYN +IDGL K     +AV+L H +  
Sbjct: 195 NTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAVELLHEMRG 254

Query: 432 NKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEK 491
              +  +  ++ LI GL + G+++ A + FH +   G+ P   TY+ ++ GLC+  + ++
Sbjct: 255 KGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAFTYNSIMFGLCKAQQTDR 314

Query: 492 ANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIV 551
           A DFL YM   GC P  V++  L+ G        + +ELL+++    R +V   +   +V
Sbjct: 315 AIDFLAYMISKGCKPTEVSYTILIEGIANEGLAKEALELLNELC--SRGVVKKSSAEQVV 372

Query: 552 VDL 554
           V L
Sbjct: 373 VRL 375



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 113/363 (31%), Positives = 191/363 (52%), Gaps = 13/363 (3%)

Query: 108 PDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGN 167
           PD +T  ILI          C E+ + +A  L   M + G +PDV+TY  L+NG C+ G 
Sbjct: 14  PDVITYTILI-------EATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGMCKEGR 66

Query: 168 LSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPA 227
           L  A++    M S        S+ N+ +++II+ S+C  G    A++L  EM  +G +P+
Sbjct: 67  LDEAIKFLNSMPSYG------SQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPS 120

Query: 228 VVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLE 287
           VV    LI+  C  G       +  +M   G  PN L++N ++   CK  K++ A   LE
Sbjct: 121 VVTFNILINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLE 180

Query: 288 LMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKIL 347
           +M+ RG  PD  TYN+++   C  G++D A E+   + SKGC   +++YN +I+G  K+ 
Sbjct: 181 IMVSRGCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVG 240

Query: 348 NVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYN 407
             ++A+ L  ++   G++  VITY++L++GL + G+   A K F +++ + V+P+  TYN
Sbjct: 241 KTDQAVELLHEMRGKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAFTYN 300

Query: 408 ILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQK 467
            ++ GLCK      A+     +     +     +  LI+G+   G    A EL ++L  +
Sbjct: 301 SIMFGLCKAQQTDRAIDFLAYMISKGCKPTEVSYTILIEGIANEGLAKEALELLNELCSR 360

Query: 468 GLV 470
           G+V
Sbjct: 361 GVV 363



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 106/333 (31%), Positives = 179/333 (53%), Gaps = 2/333 (0%)

Query: 226 PAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGL 285
           P V+  T LI   C      +   L  EM   G +P+++T+NV+++ +CK G+++EA   
Sbjct: 14  PDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGMCKEGRLDEAIKF 73

Query: 286 LELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCK 345
           L  M   G  P+  T+N ++   C  GR   A ++   M  KGC  +VV++NILIN  C+
Sbjct: 74  LNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVVTFNILINFLCR 133

Query: 346 ILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLST 405
              +  A+ +  ++ ++G     ++YN LL G  +  +   A +  + M      PD+ T
Sbjct: 134 KGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSRGCYPDIVT 193

Query: 406 YNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLP 465
           YN ++  LCK+  V  AV+L + L        +  +N +IDGL K G+ D A EL H++ 
Sbjct: 194 YNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAVELLHEMR 253

Query: 466 QKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTS 525
            KGL P V+TYS +I GL R+GK+E+A  F   +E  G  PN  T+N++M G  +  +T 
Sbjct: 254 GKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAFTYNSIMFGLCKAQQTD 313

Query: 526 KVVELLHKMAEPERNLVPDDTTFSIVVDLLAKD 558
           + ++ L  M    +   P + +++I+++ +A +
Sbjct: 314 RAIDFLAYMI--SKGCKPTEVSYTILIEGIANE 344



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 105/357 (29%), Positives = 180/357 (50%), Gaps = 13/357 (3%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
           P + ++ +L  A          +    ++ S G  PD +T N+L+N       G+C E R
Sbjct: 14  PDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVN-------GMCKEGR 66

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
           + EA     +M ++G +P+VIT+  ++   C TG    A +L  +MV            +
Sbjct: 67  LDEAIKFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKG------CSPS 120

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
           + +++I+I+ LC++GL+ +A ++  +M   G  P  +    L+HGFC     +       
Sbjct: 121 VVTFNILINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLE 180

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
            M+  G  P+++T+N M+  LCK GK++ A  LL  +  +G +P   TYN+++DG   VG
Sbjct: 181 IMVSRGCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVG 240

Query: 313 RIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYN 372
           + D A E+   M  KG K  V++Y+ LI G  +   VEEA+  +  +   GV+    TYN
Sbjct: 241 KTDQAVELLHEMRGKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAFTYN 300

Query: 373 TLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHML 429
           +++ GL +A Q   A      M     +P   +Y ILI+G+      +EA++L + L
Sbjct: 301 SIMFGLCKAQQTDRAIDFLAYMISKGCKPTEVSYTILIEGIANEGLAKEALELLNEL 357



 Score =  165 bits (417), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 88/279 (31%), Positives = 152/279 (54%), Gaps = 2/279 (0%)

Query: 285 LLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYC 344
           +L+  +++   PD  TY  L++  C    +  A ++   M S+GCK  VV+YN+L+NG C
Sbjct: 3   VLDRQLEKECYPDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGMC 62

Query: 345 KILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLS 404
           K   ++EA+     + S G +  VIT+N +L  +   G+   A+KL  EM      P + 
Sbjct: 63  KEGRLDEAIKFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVV 122

Query: 405 TYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKL 464
           T+NILI+ LC+   +  A+ +   +  +        +N L+ G CK  ++D A +    +
Sbjct: 123 TFNILINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIM 182

Query: 465 PQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKT 524
             +G  P +VTY+ M+  LC+ GK++ A + L  +   GC+P ++T+NT++ G  +  KT
Sbjct: 183 VSRGCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKT 242

Query: 525 SKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
            + VELLH+M    + L PD  T+S ++  L+++ K  E
Sbjct: 243 DQAVELLHEMR--GKGLKPDVITYSSLIAGLSREGKVEE 279



 Score =  148 bits (374), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 98/324 (30%), Positives = 160/324 (49%), Gaps = 17/324 (5%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
           N  ++  CK G   L+EA  F   M      P + + N++  ++     +        ++
Sbjct: 55  NVLVNGMCKEG--RLDEAIKFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEM 112

Query: 102 VSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLING 161
           V  G  P  +T NILIN        LC +  +  A  + + M   G  P+ ++Y  L++G
Sbjct: 113 VRKGCSPSVVTFNILINF-------LCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHG 165

Query: 162 FCRTGNLSVALRLHKKMVS-GDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMK 220
           FC+   +  A++  + MVS G Y        +I +Y+ ++ +LCK+G VD A EL  ++ 
Sbjct: 166 FCKEKKMDRAIQYLEIMVSRGCY-------PDIVTYNTMLTALCKDGKVDAAVELLNQLS 218

Query: 221 GRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKIN 280
            +G +P ++   T+I G    G  ++   L  EM   G +P+++T++ +I  L + GK+ 
Sbjct: 219 SKGCSPVLITYNTVIDGLSKVGKTDQAVELLHEMRGKGLKPDVITYSSLIAGLSREGKVE 278

Query: 281 EANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILI 340
           EA      +   G+ P+ FTYNS+M G C   + D A +    M SKGCK T VSY ILI
Sbjct: 279 EAIKFFHDVEGFGVKPNAFTYNSIMFGLCKAQQTDRAIDFLAYMISKGCKPTEVSYTILI 338

Query: 341 NGYCKILNVEEAMSLYRQIISNGV 364
            G       +EA+ L  ++ S GV
Sbjct: 339 EGIANEGLAKEALELLNELCSRGV 362



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 27/94 (28%), Positives = 50/94 (53%), Gaps = 2/94 (2%)

Query: 459 ELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGF 518
           E+  +  +K   P V+TY+I+I   C +  + +A   L  M   GC P+VVT+N L++G 
Sbjct: 2   EVLDRQLEKECYPDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGM 61

Query: 519 LQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVV 552
            +  +  + ++ L+ M  P     P+  T +I++
Sbjct: 62  CKEGRLDEAIKFLNSM--PSYGSQPNVITHNIIL 93


>gi|356519580|ref|XP_003528450.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
           mitochondrial-like [Glycine max]
          Length = 1012

 Score =  214 bits (546), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 152/546 (27%), Positives = 266/546 (48%), Gaps = 53/546 (9%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
           +  L+  C+ G   L EA      M +M   P   S+  +  A+ K+       +   ++
Sbjct: 275 SSILYGLCRHG--KLTEAAMLLREMYNMGLDPNHVSYTTIISALLKSGRVMEAFNHQSQM 332

Query: 102 VSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLING 161
           V  G+  D +    +++       GL    + KEA  +F+ ++   + P+ +TY  L++G
Sbjct: 333 VVRGISIDLVLCTTMMD-------GLFKAGKSKEAEEMFQTILKLNLVPNCVTYTALLDG 385

Query: 162 FCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKG 221
            C+ G++  A  + +KM   + E+ L    N+ ++S II+   K+G+++KA E+  +M  
Sbjct: 386 HCKVGDVEFAETVLQKM---EKEHVL---PNVVTFSSIINGYAKKGMLNKAVEVLRKMVQ 439

Query: 222 RGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINE 281
             I P V V   L+ G+   G  E   G + EM   G   N + F+++++ L + G + E
Sbjct: 440 MNIMPNVFVYAILLDGYFRTGQHEAAAGFYKEMKSWGLEENNIIFDILLNNLKRSGGMKE 499

Query: 282 ANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILIN 341
           A  L++ ++ +G+  D F Y+SLMDGY   G    A  +   M  K  +  VV+YN L  
Sbjct: 500 AQSLIKDILSKGIYLDVFNYSSLMDGYFKEGNESAALSVVQEMTEKDMQFDVVAYNALTK 559

Query: 342 GYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEP 401
           G  + L   E  S++ ++I  G+    +TYN++++  F  G+   A  L +EMK Y V P
Sbjct: 560 GLLR-LGKYEPKSVFSRMIELGLTPDCVTYNSVMNTYFIQGKTENALDLLNEMKSYGVMP 618

Query: 402 DLSTYNILIDGLCKNNCVQEAVKLFH-----------------------------MLEMN 432
           ++ TYNILI GLCK   +++ + + H                             +L+++
Sbjct: 619 NMVTYNILIGGLCKTGAIEKVISVLHEMLAVGYVPTPIIHKFLLKAYSRSRKADAILQIH 678

Query: 433 K--FEFGIE----IFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRK 486
           K   + G+     ++N LI  LC+ G    A  +  ++  KG+   +VTY+ +I G C  
Sbjct: 679 KKLVDMGLNLNQMVYNTLITVLCRLGMTKKANVVLTEMVIKGISADIVTYNALIRGYCTG 738

Query: 487 GKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDT 546
             +EKA +    M  +G +PN+ T+N L+ G   N       +L+ +M E  R LVP+ T
Sbjct: 739 SHVEKAFNTYSQMLVSGISPNITTYNALLEGLSTNGLMRDADKLVSEMRE--RGLVPNAT 796

Query: 547 TFSIVV 552
           T++I+V
Sbjct: 797 TYNILV 802



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 131/457 (28%), Positives = 226/457 (49%), Gaps = 39/457 (8%)

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
           + +   L+  M+  GV P+V +   L++  C+ G+L +AL        G   N +     
Sbjct: 26  VSQVKVLYSEMVLCGVVPNVFSVNLLVHSLCKVGDLGLAL--------GYLRNSVFDHV- 76

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
             +Y+ ++   CK GL D+   L  EM  +G+    V C  L+ G+C  G  +    +  
Sbjct: 77  --TYNTVVWGFCKRGLADQGFGLLSEMVKKGVCFDSVTCNILVKGYCQIGLVQYAEWIMG 134

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
            ++  G   + +  N ++D  C+ G ++ A  L+E   + G+ PD  TYN+L++ +C  G
Sbjct: 135 NLVGGGVPLDAIGLNTLVDGYCEVGLVSRALDLVEDGWKNGVKPDIVTYNTLVNAFCKRG 194

Query: 313 RIDTAREI------FLSMHSKGC---------------KHTVVSYNILINGYCKILNVEE 351
            +  A  +      F      G                + TVV++  LI  YCK   +++
Sbjct: 195 DLAKAESVVNEILGFRRDDESGVLNDCGVETWDGLRDLQPTVVTWTTLIAAYCKHRGIDD 254

Query: 352 AMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILID 411
             SLY Q+I +GV   V+T +++L GL + G+   A  L  EM    ++P+  +Y  +I 
Sbjct: 255 FFSLYEQMIMSGVMPDVVTCSSILYGLCRHGKLTEAAMLLREMYNMGLDPNHVSYTTIIS 314

Query: 412 GLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNC--LIDGLCKAGRLDNAWELFHKLPQKGL 469
            L K+  V EA    H  +M      I++  C  ++DGL KAG+   A E+F  + +  L
Sbjct: 315 ALLKSGRVMEAFN--HQSQMVVRGISIDLVLCTTMMDGLFKAGKSKEAEEMFQTILKLNL 372

Query: 470 VPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVE 529
           VP  VTY+ ++ G C+ G +E A   L  MEK    PNVVTF+++++G+ +    +K VE
Sbjct: 373 VPNCVTYTALLDGHCKVGDVEFAETVLQKMEKEHVLPNVVTFSSIINGYAKKGMLNKAVE 432

Query: 530 LLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSA 566
           +L KM   + N++P+   ++I++D   +  + HE +A
Sbjct: 433 VLRKMV--QMNIMPNVFVYAILLDGYFRTGQ-HEAAA 466



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 139/515 (26%), Positives = 240/515 (46%), Gaps = 62/515 (12%)

Query: 19  VKLSSLFKSPRQIAAVSSPETQLNEFLHENCK------SGIIN-------LNEARYFFGY 65
           V  ++L     ++  V   ET L +   E+        S IIN       LN+A      
Sbjct: 377 VTYTALLDGHCKVGDVEFAETVLQKMEKEHVLPNVVTFSSIINGYAKKGMLNKAVEVLRK 436

Query: 66  MTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKER 125
           M  M   P +  + +L     +   ++A   FY+++ S GL  + +  +IL+N   N +R
Sbjct: 437 MVQMNIMPNVFVYAILLDGYFRTGQHEAAAGFYKEMKSWGLEENNIIFDILLN---NLKR 493

Query: 126 GLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYEN 185
                  +KEA  L K++++ G+  DV  Y +L++G+ + GN S AL + ++M   D + 
Sbjct: 494 ----SGGMKEAQSLIKDILSKGIYLDVFNYSSLMDGYFKEGNESAALSVVQEMTEKDMQ- 548

Query: 186 GLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWE 245
                 ++ +Y+ +   L + G  +  K +F  M   G+ P  V   ++++ +   G  E
Sbjct: 549 -----FDVVAYNALTKGLLRLGKYE-PKSVFSRMIELGLTPDCVTYNSVMNTYFIQGKTE 602

Query: 246 EVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKIN------------------------- 280
               L  EM   G  PN++T+N++I  LCK G I                          
Sbjct: 603 NALDLLNEMKSYGVMPNMVTYNILIGGLCKTGAIEKVISVLHEMLAVGYVPTPIIHKFLL 662

Query: 281 -------EANGLLEL---MIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCK 330
                  +A+ +L++   ++  GLN ++  YN+L+   C +G    A  +   M  KG  
Sbjct: 663 KAYSRSRKADAILQIHKKLVDMGLNLNQMVYNTLITVLCRLGMTKKANVVLTEMVIKGIS 722

Query: 331 HTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKL 390
             +V+YN LI GYC   +VE+A + Y Q++ +G+   + TYN LL GL   G    A KL
Sbjct: 723 ADIVTYNALIRGYCTGSHVEKAFNTYSQMLVSGISPNITTYNALLEGLSTNGLMRDADKL 782

Query: 391 FDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCK 450
             EM+   + P+ +TYNIL+ G  +    ++++KL+  +    F      +N LI    K
Sbjct: 783 VSEMRERGLVPNATTYNILVSGHGRVGNKRDSIKLYCEMITKGFIPTTGTYNVLIQDYAK 842

Query: 451 AGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCR 485
           AG++  A EL +++  +G +P   TY ++I G C+
Sbjct: 843 AGKMRQARELLNEMLTRGRIPNSSTYDVLICGWCK 877



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 129/507 (25%), Positives = 241/507 (47%), Gaps = 60/507 (11%)

Query: 101 LVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLIN 160
           LV  G+  D + LN L++       G C    +  A  L ++    GV+PD++TY TL+N
Sbjct: 136 LVGGGVPLDAIGLNTLVD-------GYCEVGLVSRALDLVEDGWKNGVKPDIVTYNTLVN 188

Query: 161 GFCRTGNLSVALRLHKKMVS--GDYENGLIS-------------KTNIFSYSIIIDSLCK 205
            FC+ G+L+ A  +  +++    D E+G+++             +  + +++ +I + CK
Sbjct: 189 AFCKRGDLAKAESVVNEILGFRRDDESGVLNDCGVETWDGLRDLQPTVVTWTTLIAAYCK 248

Query: 206 EGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLT 265
              +D    L+ +M   G+ P VV C+++++G C  G   E   L  EM ++G  PN ++
Sbjct: 249 HRGIDDFFSLYEQMIMSGVMPDVVTCSSILYGLCRHGKLTEAAMLLREMYNMGLDPNHVS 308

Query: 266 FNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMH 325
           +  +I  L K G++ EA      M+ RG++ D     ++MDG    G+   A E+F ++ 
Sbjct: 309 YTTIISALLKSGRVMEAFNHQSQMVVRGISIDLVLCTTMMDGLFKAGKSKEAEEMFQTIL 368

Query: 326 SKGCKHTVVSYNILINGYCKILNVE----------------------------------- 350
                   V+Y  L++G+CK+ +VE                                   
Sbjct: 369 KLNLVPNCVTYTALLDGHCKVGDVEFAETVLQKMEKEHVLPNVVTFSSIINGYAKKGMLN 428

Query: 351 EAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILI 410
           +A+ + R+++   +   V  Y  LL G F+ GQ   A   + EMK + +E +   ++IL+
Sbjct: 429 KAVEVLRKMVQMNIMPNVFVYAILLDGYFRTGQHEAAAGFYKEMKSWGLEENNIIFDILL 488

Query: 411 DGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLV 470
           + L ++  ++EA  L   +        +  ++ L+DG  K G    A  +  ++ +K + 
Sbjct: 489 NNLKRSGGMKEAQSLIKDILSKGIYLDVFNYSSLMDGYFKEGNESAALSVVQEMTEKDMQ 548

Query: 471 PTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVEL 530
             VV Y+ +  GL R GK E  + F   +E  G  P+ VT+N++M+ +    KT   ++L
Sbjct: 549 FDVVAYNALTKGLLRLGKYEPKSVFSRMIEL-GLTPDCVTYNSVMNTYFIQGKTENALDL 607

Query: 531 LHKMAEPERNLVPDDTTFSIVVDLLAK 557
           L++M      ++P+  T++I++  L K
Sbjct: 608 LNEM--KSYGVMPNMVTYNILIGGLCK 632



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 128/476 (26%), Positives = 224/476 (47%), Gaps = 34/476 (7%)

Query: 41  LNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRK 100
           +N  +H  CK G + L           H+       ++N +     K    D       +
Sbjct: 48  VNLLVHSLCKVGDLGLALGYLRNSVFDHV-------TYNTVVWGFCKRGLADQGFGLLSE 100

Query: 101 LVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLIN 160
           +V  G+  D +T NIL+       +G C    ++ A W+  N++  GV  D I   TL++
Sbjct: 101 MVKKGVCFDSVTCNILV-------KGYCQIGLVQYAEWIMGNLVGGGVPLDAIGLNTLVD 153

Query: 161 GFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMK 220
           G+C  G +S AL L    V   ++NG+  K +I +Y+ ++++ CK G + KA+ +  E+ 
Sbjct: 154 GYCEVGLVSRALDL----VEDGWKNGV--KPDIVTYNTLVNAFCKRGDLAKAESVVNEIL 207

Query: 221 GRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKIN 280
           G   +    V        C    W+ +  L         +P ++T+  +I   CK   I+
Sbjct: 208 GFRRDDESGVLND-----CGVETWDGLRDL---------QPTVVTWTTLIAAYCKHRGID 253

Query: 281 EANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILI 340
           +   L E MI  G+ PD  T +S++ G C  G++  A  +   M++ G     VSY  +I
Sbjct: 254 DFFSLYEQMIMSGVMPDVVTCSSILYGLCRHGKLTEAAMLLREMYNMGLDPNHVSYTTII 313

Query: 341 NGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVE 400
           +   K   V EA +   Q++  G+   ++   T++ GLF+AG++  A+++F  +   N+ 
Sbjct: 314 SALLKSGRVMEAFNHQSQMVVRGISIDLVLCTTMMDGLFKAGKSKEAEEMFQTILKLNLV 373

Query: 401 PDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWEL 460
           P+  TY  L+DG CK   V+ A  +   +E       +  F+ +I+G  K G L+ A E+
Sbjct: 374 PNCVTYTALLDGHCKVGDVEFAETVLQKMEKEHVLPNVVTFSSIINGYAKKGMLNKAVEV 433

Query: 461 FHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMH 516
             K+ Q  ++P V  Y+I++ G  R G+ E A  F   M+  G   N + F+ L++
Sbjct: 434 LRKMVQMNIMPNVFVYAILLDGYFRTGQHEAAAGFYKEMKSWGLEENNIIFDILLN 489



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 95/368 (25%), Positives = 175/368 (47%), Gaps = 28/368 (7%)

Query: 207 GLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTF 266
           G V + K L+ EM   G+ P V     L+H  C  G+     GL +  L      + +T+
Sbjct: 24  GFVSQVKVLYSEMVLCGVVPNVFSVNLLVHSLCKVGDL----GLALGYLR-NSVFDHVTY 78

Query: 267 NVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHS 326
           N ++   CK G  ++  GLL  M+++G+  D  T N L+ GYC +G +  A  I  ++  
Sbjct: 79  NTVVWGFCKRGLADQGFGLLSEMVKKGVCFDSVTCNILVKGYCQIGLVQYAEWIMGNLVG 138

Query: 327 KGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGY 386
            G     +  N L++GYC++  V  A+ L      NGV+  ++TYNTL++   + G    
Sbjct: 139 GGVPLDAIGLNTLVDGYCEVGLVSRALDLVEDGWKNGVKPDIVTYNTLVNAFCKRGDLAK 198

Query: 387 AQKLFDEM---------------------KLYNVEPDLSTYNILIDGLCKNNCVQEAVKL 425
           A+ + +E+                      L +++P + T+  LI   CK+  + +   L
Sbjct: 199 AESVVNEILGFRRDDESGVLNDCGVETWDGLRDLQPTVVTWTTLIAAYCKHRGIDDFFSL 258

Query: 426 FHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCR 485
           +  + M+     +   + ++ GLC+ G+L  A  L  ++   GL P  V+Y+ +I  L +
Sbjct: 259 YEQMIMSGVMPDVVTCSSILYGLCRHGKLTEAAMLLREMYNMGLDPNHVSYTTIISALLK 318

Query: 486 KGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDD 545
            G++ +A +    M   G + ++V   T+M G  +  K+ +  E+   +   + NLVP+ 
Sbjct: 319 SGRVMEAFNHQSQMVVRGISIDLVLCTTMMDGLFKAGKSKEAEEMFQTIL--KLNLVPNC 376

Query: 546 TTFSIVVD 553
            T++ ++D
Sbjct: 377 VTYTALLD 384



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 105/370 (28%), Positives = 175/370 (47%), Gaps = 34/370 (9%)

Query: 219 MKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGK 278
           M+   + P++ +   L++ F  +G   +V  L+ EM+  G  PN+ + N+++  LCK G 
Sbjct: 1   MRALSLVPSLPLWNDLLYEFNASGFVSQVKVLYSEMVLCGVVPNVFSVNLLVHSLCKVGD 60

Query: 279 INEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNI 338
           +  A G L     R    D  TYN+++ G+C  G  D    +   M  KG     V+ NI
Sbjct: 61  LGLALGYL-----RNSVFDHVTYNTVVWGFCKRGLADQGFGLLSEMVKKGVCFDSVTCNI 115

Query: 339 LINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYN 398
           L+ GYC+I  V+ A  +   ++  GV    I  NTL+ G  + G    A  L ++     
Sbjct: 116 LVKGYCQIGLVQYAEWIMGNLVGGGVPLDAIGLNTLVDGYCEVGLVSRALDLVEDGWKNG 175

Query: 399 VEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKF----------EFGIEIFN------ 442
           V+PD+ TYN L++  CK   + +A  + +  E+  F          + G+E ++      
Sbjct: 176 VKPDIVTYNTLVNAFCKRGDLAKAESVVN--EILGFRRDDESGVLNDCGVETWDGLRDLQ 233

Query: 443 -------CLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDF 495
                   LI   CK   +D+ + L+ ++   G++P VVT S +++GLCR GKL +A   
Sbjct: 234 PTVVTWTTLIAAYCKHRGIDDFFSLYEQMIMSGVMPDVVTCSSILYGLCRHGKLTEAAML 293

Query: 496 LLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELL-HKMAEPERNLVPDDTTFSIVVDL 554
           L  M   G  PN V++ T++   L   K+ +V+E   H+     R +  D    + ++D 
Sbjct: 294 LREMYNMGLDPNHVSYTTIISALL---KSGRVMEAFNHQSQMVVRGISIDLVLCTTMMDG 350

Query: 555 LAKDEKYHEC 564
           L K  K  E 
Sbjct: 351 LFKAGKSKEA 360


>gi|449451888|ref|XP_004143692.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Cucumis sativus]
 gi|449529106|ref|XP_004171542.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Cucumis sativus]
          Length = 783

 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 148/500 (29%), Positives = 247/500 (49%), Gaps = 50/500 (10%)

Query: 73  PPISSFNLL-FGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVEN 131
           P  +SFN+L +G   +++  DA + +  K+   G +PD ++ N +++        L    
Sbjct: 211 PNTNSFNILIYGYCLESKVKDA-LDWVNKMSEFGCVPDTVSYNTILD-------ALLKRR 262

Query: 132 RIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKT 191
            ++EA  L  +M + G+ P+  TY  L+ G+CR G L  A ++ + M      N L+   
Sbjct: 263 LLQEARDLLLDMKSKGLSPNKHTYNMLVCGYCRLGLLKEATKVIEIMT----RNNLLP-- 316

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
            +++Y+++++  C +G +D+A  +  EM+   + P VV   TLI G     +  EV  L 
Sbjct: 317 TVWTYNMLVNGFCNDGKIDEAFRIRDEMEKMNVLPDVVTYNTLIDGCSQWRDSSEVYSLI 376

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
            EM   G + N +T+N+++  +CK G + EA   L+ M + GL+PD  TYN+L+  YC  
Sbjct: 377 EEMDKKGVKCNAVTYNIILKWMCKKGNMTEATTTLDKMEENGLSPDCVTYNTLIGAYCKA 436

Query: 312 GRIDTAREIFLSMHSKGCK------HTV-----------------------------VSY 336
           G++  A  +   M SKG K      +T+                             VSY
Sbjct: 437 GKMGKAFRMMDEMTSKGLKIDTWTLNTILHCLCVEKKLDEAYNLLCSASKRGYILDEVSY 496

Query: 337 NILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKL 396
            ILI GY K    + A++L+ ++    +  + ITYN+++ GL Q+ +   A    +EM  
Sbjct: 497 GILILGYFKDEKGDRALNLWDEMKERQIMPSTITYNSVIGGLCQSRKVDQAIDKLNEMLE 556

Query: 397 YNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDN 456
             + PD +TYNI+I G C    V++A +  + +  N F+  +   N L+ GLC+ G L+ 
Sbjct: 557 NGLVPDETTYNIIIHGFCLEGNVEKAFQFHNEMIENLFKPDVYTCNILLRGLCREGMLEK 616

Query: 457 AWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMH 516
           A +LF+ L  KG    VVTY+ +I  LC++GK E A D L  ME     P+  T+  ++ 
Sbjct: 617 ALKLFNTLVSKGKDIDVVTYNTIISSLCKEGKFENAYDLLTEMEAKKLGPDQYTYKVIIA 676

Query: 517 GFLQNNKTSKVVELLHKMAE 536
                 +  +  E   KM E
Sbjct: 677 ALTDAGRIKEAEEFTLKMVE 696



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 140/474 (29%), Positives = 231/474 (48%), Gaps = 17/474 (3%)

Query: 56  LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNI 115
           L EAR     M     SP   ++N+L     +             +    LLP   T N+
Sbjct: 264 LQEARDLLLDMKSKGLSPNKHTYNMLVCGYCRLGLLKEATKVIEIMTRNNLLPTVWTYNM 323

Query: 116 LINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLH 175
           L+N       G C + +I EA  +   M    V PDV+TY TLI+G  +  + S    L 
Sbjct: 324 LVN-------GFCNDGKIDEAFRIRDEMEKMNVLPDVVTYNTLIDGCSQWRDSSEVYSLI 376

Query: 176 KKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLI 235
           ++M     + G+  K N  +Y+II+  +CK+G + +A     +M+  G++P  V   TLI
Sbjct: 377 EEMD----KKGV--KCNAVTYNIILKWMCKKGNMTEATTTLDKMEENGLSPDCVTYNTLI 430

Query: 236 HGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLN 295
             +C AG   +   +  EM   G + +  T N ++ CLC   K++EA  LL    +RG  
Sbjct: 431 GAYCKAGKMGKAFRMMDEMTSKGLKIDTWTLNTILHCLCVEKKLDEAYNLLCSASKRGYI 490

Query: 296 PDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSL 355
            D  +Y  L+ GY    + D A  ++  M  +    + ++YN +I G C+   V++A+  
Sbjct: 491 LDEVSYGILILGYFKDEKGDRALNLWDEMKERQIMPSTITYNSVIGGLCQSRKVDQAIDK 550

Query: 356 YRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCK 415
             +++ NG+     TYN ++ G    G    A +  +EM     +PD+ T NIL+ GLC+
Sbjct: 551 LNEMLENGLVPDETTYNIIIHGFCLEGNVEKAFQFHNEMIENLFKPDVYTCNILLRGLCR 610

Query: 416 NNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVT 475
              +++A+KLF+ L     +  +  +N +I  LCK G+ +NA++L  ++  K L P   T
Sbjct: 611 EGMLEKALKLFNTLVSKGKDIDVVTYNTIISSLCKEGKFENAYDLLTEMEAKKLGPDQYT 670

Query: 476 YSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVE 529
           Y ++I  L   G++++A +F L M ++G    +V    L  G  QN  TS+V E
Sbjct: 671 YKVIIAALTDAGRIKEAEEFTLKMVESG----IVHDQNLKLGKGQNVLTSEVSE 720



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 118/417 (28%), Positives = 210/417 (50%), Gaps = 5/417 (1%)

Query: 136 ATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFS 195
           AT +F  M     RP+++T  TL+N   R  + S ++ L ++++    + G++  TN  S
Sbjct: 159 ATQIFNKMKRLNYRPNLLTCNTLMNSLVRYPS-SSSILLARQVLKDSIKLGVVPNTN--S 215

Query: 196 YSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEML 255
           ++I+I   C E  V  A +   +M   G  P  V   T++         +E   L ++M 
Sbjct: 216 FNILIYGYCLESKVKDALDWVNKMSEFGCVPDTVSYNTILDALLKRRLLQEARDLLLDMK 275

Query: 256 DLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRID 315
             G  PN  T+N+++   C+ G + EA  ++E+M +  L P  +TYN L++G+C  G+ID
Sbjct: 276 SKGLSPNKHTYNMLVCGYCRLGLLKEATKVIEIMTRNNLLPTVWTYNMLVNGFCNDGKID 335

Query: 316 TAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLL 375
            A  I   M        VV+YN LI+G  +  +  E  SL  ++   GV+   +TYN +L
Sbjct: 336 EAFRIRDEMEKMNVLPDVVTYNTLIDGCSQWRDSSEVYSLIEEMDKKGVKCNAVTYNIIL 395

Query: 376 SGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFE 435
             + + G    A    D+M+   + PD  TYN LI   CK   + +A ++   +     +
Sbjct: 396 KWMCKKGNMTEATTTLDKMEENGLSPDCVTYNTLIGAYCKAGKMGKAFRMMDEMTSKGLK 455

Query: 436 FGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDF 495
                 N ++  LC   +LD A+ L     ++G +   V+Y I+I G  +  K ++A + 
Sbjct: 456 IDTWTLNTILHCLCVEKKLDEAYNLLCSASKRGYILDEVSYGILILGYFKDEKGDRALNL 515

Query: 496 LLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVV 552
              M++    P+ +T+N+++ G  Q+ K  + ++ L++M   E  LVPD+TT++I++
Sbjct: 516 WDEMKERQIMPSTITYNSVIGGLCQSRKVDQAIDKLNEML--ENGLVPDETTYNIII 570



 Score = 79.0 bits (193), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 54/200 (27%), Positives = 103/200 (51%), Gaps = 13/200 (6%)

Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
           +T +    Q  Q   A ++F++MK  N  P+L T N L++ L +      ++ L   +  
Sbjct: 144 DTSIGAYVQMDQPHLATQIFNKMKRLNYRPNLLTCNTLMNSLVRYPS-SSSILLARQVLK 202

Query: 432 NKFEFGI----EIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKG 487
           +  + G+      FN LI G C   ++ +A +  +K+ + G VP  V+Y+ ++  L ++ 
Sbjct: 203 DSIKLGVVPNTNSFNILIYGYCLESKVKDALDWVNKMSEFGCVPDTVSYNTILDALLKRR 262

Query: 488 KLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQ---NNKTSKVVELLHKMAEPERNLVPD 544
            L++A D LL M+  G +PN  T+N L+ G+ +     + +KV+E++ +      NL+P 
Sbjct: 263 LLQEARDLLLDMKSKGLSPNKHTYNMLVCGYCRLGLLKEATKVIEIMTR-----NNLLPT 317

Query: 545 DTTFSIVVDLLAKDEKYHEC 564
             T++++V+    D K  E 
Sbjct: 318 VWTYNMLVNGFCNDGKIDEA 337


>gi|302755068|ref|XP_002960958.1| hypothetical protein SELMODRAFT_70262 [Selaginella moellendorffii]
 gi|300171897|gb|EFJ38497.1| hypothetical protein SELMODRAFT_70262 [Selaginella moellendorffii]
          Length = 479

 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 134/460 (29%), Positives = 218/460 (47%), Gaps = 19/460 (4%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
           P   S+  L  A+ +    D   S   ++    L+PD  T N++I+        LC   R
Sbjct: 33  PNALSYCYLVKALCRTGKIDKACSTIAEMAREKLVPDVFTYNVVID-------TLCKARR 85

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
           I  A   F+ M      PDV+TY TL+ G C+ G ++ A  L      G  E   I+ ++
Sbjct: 86  ISRAIEFFETM----PEPDVVTYNTLLGGLCKNGRVAQACSLF-----GSMEGAGITPSD 136

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
           + +Y+ +ID  CK    + A  L   M  R  +P V    ++I+G C     ++   LF 
Sbjct: 137 V-TYTTLIDVFCKMCQFETAYGLLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFE 195

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
           EM   G +P+ +T+N +I  LC   +++EA  LL +M++ G  PD+ T+ +L++G C   
Sbjct: 196 EMKLAGCKPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVENGFQPDKITFTALIEGLCTTD 255

Query: 313 RIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYN 372
           RI  A  +F  M  +GC   +V++ +L++  C +  +  A+S+ R        + VI Y 
Sbjct: 256 RIKEAFVLFQGMAKQGCAPDLVTHTVLVSKLCILRKLRPALSVVRNY--PACPEAVILYT 313

Query: 373 TLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMN 432
            +   L +      A +L  +M    V P++ TY     GL        A + F  +   
Sbjct: 314 PIFRELGRRRGFDRAARLLQKMARRGVPPNVVTYTAFFKGLGDWKEGMRAYREFRRMLEQ 373

Query: 433 KFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKA 492
             E  +  +N L+DG CKA RLD A ++   + Q GL P +VTY+ ++   CRKGK+E  
Sbjct: 374 GIEPDMVAYNVLVDGFCKADRLDMAEKMVRYMDQSGLPPNIVTYNTLVGHHCRKGKVEAI 433

Query: 493 NDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLH 532
            + L  M   G  P+V T++TL+ G     +       L+
Sbjct: 434 GELLHTMVSRGRQPDVATWSTLVAGLFMVGQADAAYSFLN 473



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 128/448 (28%), Positives = 209/448 (46%), Gaps = 21/448 (4%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           C++G   +++A      M   +  P + ++N++   + K R     I F+  +      P
Sbjct: 46  CRTG--KIDKACSTIAEMAREKLVPDVFTYNVVIDTLCKARRISRAIEFFETMPE----P 99

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           D +T N L+        GLC   R+ +A  LF +M   G+ P  +TY TLI+ FC+    
Sbjct: 100 DVVTYNTLLG-------GLCKNGRVAQACSLFGSMEGAGITPSDVTYTTLIDVFCKMCQF 152

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
             A  L + M S            ++SY  II+ LCK   VD+A +LF EMK  G  P  
Sbjct: 153 ETAYGLLQLMASRK------CSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAGCKPDR 206

Query: 229 VVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLEL 288
           V   TLIHG C      E   L   M++ G +P+ +TF  +I+ LC   +I EA  L + 
Sbjct: 207 VTYNTLIHGLCVKQRLHEAKDLLTVMVENGFQPDKITFTALIEGLCTTDRIKEAFVLFQG 266

Query: 289 MIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILN 348
           M ++G  PD  T+  L+   C++ ++  A  +    +   C   V+ Y  +     +   
Sbjct: 267 MAKQGCAPDLVTHTVLVSKLCILRKLRPALSVV--RNYPACPEAVILYTPIFRELGRRRG 324

Query: 349 VEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNI 408
            + A  L +++   GV   V+TY     GL    +   A + F  M    +EPD+  YN+
Sbjct: 325 FDRAARLLQKMARRGVPPNVVTYTAFFKGLGDWKEGMRAYREFRRMLEQGIEPDMVAYNV 384

Query: 409 LIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKG 468
           L+DG CK + +  A K+   ++ +     I  +N L+   C+ G+++   EL H +  +G
Sbjct: 385 LVDGFCKADRLDMAEKMVRYMDQSGLPPNIVTYNTLVGHHCRKGKVEAIGELLHTMVSRG 444

Query: 469 LVPTVVTYSIMIHGLCRKGKLEKANDFL 496
             P V T+S ++ GL   G+ + A  FL
Sbjct: 445 RQPDVATWSTLVAGLFMVGQADAAYSFL 472



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 113/404 (27%), Positives = 180/404 (44%), Gaps = 74/404 (18%)

Query: 190 KTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNG 249
           K N  SY  ++ +LC+ G +DKA                  C+T+               
Sbjct: 32  KPNALSYCYLVKALCRTGKIDKA------------------CSTIA-------------- 59

Query: 250 LFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYC 309
              EM      P++ T+NV+ID LCK  +I+ A    E M +    PD  TYN+L+ G C
Sbjct: 60  ---EMAREKLVPDVFTYNVVIDTLCKARRISRAIEFFETMPE----PDVVTYNTLLGGLC 112

Query: 310 LVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVI 369
             GR+  A  +F SM   G   + V+Y  LI+ +CK+   E A  L + + S     TV 
Sbjct: 113 KNGRVAQACSLFGSMEGAGITPSDVTYTTLIDVFCKMCQFETAYGLLQLMASRKCSPTVY 172

Query: 370 TYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHML 429
           +Y ++++GL +  +   A +LF+EMKL   +PD  TYN LI GLC    + EA  L  ++
Sbjct: 173 SYCSIINGLCKNRKVDQAYQLFEEMKLAGCKPDRVTYNTLIHGLCVKQRLHEAKDLLTVM 232

Query: 430 EMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLC----- 484
             N F+     F  LI+GLC   R+  A+ LF  + ++G  P +VT+++++  LC     
Sbjct: 233 VENGFQPDKITFTALIEGLCTTDRIKEAFVLFQGMAKQGCAPDLVTHTVLVSKLCILRKL 292

Query: 485 ----------------------------RKGKLEKANDFLLYMEKNGCAPNVVTFNTLMH 516
                                       R+   ++A   L  M + G  PNVVT+     
Sbjct: 293 RPALSVVRNYPACPEAVILYTPIFRELGRRRGFDRAARLLQKMARRGVPPNVVTYTAFFK 352

Query: 517 GFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEK 560
           G     +  +      +M   E+ + PD   ++++VD   K ++
Sbjct: 353 GLGDWKEGMRAYREFRRML--EQGIEPDMVAYNVLVDGFCKADR 394



 Score =  138 bits (348), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 91/328 (27%), Positives = 149/328 (45%), Gaps = 40/328 (12%)

Query: 66  MTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKER 125
           M   + SP + S+  +   + KNR  D     + ++   G  PD +T N LI+       
Sbjct: 162 MASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAGCKPDRVTYNTLIH------- 214

Query: 126 GLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYEN 185
           GLCV+ R+ EA  L   M+  G +PD IT+  LI G C T  +  A  L + M       
Sbjct: 215 GLCVKQRLHEAKDLLTVMVENGFQPDKITFTALIEGLCTTDRIKEAFVLFQGMAKQGCAP 274

Query: 186 GLISKTNIFSYSIIIDSL------------CKEGLV---------------DKAKELFLE 218
            L++ T + S   I+  L            C E ++               D+A  L  +
Sbjct: 275 DLVTHTVLVSKLCILRKLRPALSVVRNYPACPEAVILYTPIFRELGRRRGFDRAARLLQK 334

Query: 219 MKGRGINPAVVVCTTLIHGFCCAGNWEE---VNGLFIEMLDLGPRPNLLTFNVMIDCLCK 275
           M  RG+ P VV  T    G    G+W+E       F  ML+ G  P+++ +NV++D  CK
Sbjct: 335 MARRGVPPNVVTYTAFFKGL---GDWKEGMRAYREFRRMLEQGIEPDMVAYNVLVDGFCK 391

Query: 276 GGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVS 335
             +++ A  ++  M Q GL P+  TYN+L+  +C  G+++   E+  +M S+G +  V +
Sbjct: 392 ADRLDMAEKMVRYMDQSGLPPNIVTYNTLVGHHCRKGKVEAIGELLHTMVSRGRQPDVAT 451

Query: 336 YNILINGYCKILNVEEAMSLYRQIISNG 363
           ++ L+ G   +   + A S     +S G
Sbjct: 452 WSTLVAGLFMVGQADAAYSFLNLAMSQG 479


>gi|222612706|gb|EEE50838.1| hypothetical protein OsJ_31258 [Oryza sativa Japonica Group]
          Length = 897

 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 140/491 (28%), Positives = 227/491 (46%), Gaps = 41/491 (8%)

Query: 56  LNEARYFFGY--MTHMQPSPPIS-SFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLT 112
           L  AR F  Y  M H    PP + +F +   A+ +    D  ++  R +   G +PD + 
Sbjct: 137 LPRARRFALYRRMVHRDRVPPTTFTFGVAARALCRLGRADEALALLRGMARHGCVPDAVL 196

Query: 113 LNILI----------------------------NCFGNKERGLCVENRIKEATWLFKNMI 144
              +I                            N F +  RG+C   R++EA  L   M+
Sbjct: 197 YQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMM 256

Query: 145 AFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLC 204
             G  P V+TYG L+ G CR      A    + M+      G + + N+  ++ +I    
Sbjct: 257 TKGCMPGVMTYGFLLQGLCRVRQADEA----RAML------GRVPELNVVLFNTVIGGCL 306

Query: 205 KEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLL 264
            EG + +A EL+  M  +G  P     + L+HG C  G       L  EM   G  PN++
Sbjct: 307 AEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVV 366

Query: 265 TFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSM 324
           T+ +++   CK G  ++   LLE M  +GL  +   YN ++   C  GR+D A  +   M
Sbjct: 367 TYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEM 426

Query: 325 HSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQA 384
            S+GC   + SYN +I   C    +EEA  ++  ++  GV    ITYNT++  L + G+ 
Sbjct: 427 RSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRW 486

Query: 385 GYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCL 444
             A +L  EM L+    D+ +YN LI  +CK+  V  ++ L   +     +     +N L
Sbjct: 487 QDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNIL 546

Query: 445 IDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGC 504
           I  LCK  R+ +A EL  ++  +GL P +VTY+ +I+GLC+ G +  A + L  +     
Sbjct: 547 ISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENV 606

Query: 505 APNVVTFNTLM 515
            P+++T+N L+
Sbjct: 607 HPDIITYNILI 617



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 124/445 (27%), Positives = 205/445 (46%), Gaps = 30/445 (6%)

Query: 32  AAVSSPETQLNEFLHENCKS-------------GIINLNEARYFFGYMTHMQPSPPISSF 78
             V+   T LNE L   C +             G+  + EA      M      P + ++
Sbjct: 208 GGVTEAATLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTY 267

Query: 79  NLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATW 138
             L   + + R  D   +       +G +P+   LN+++  F     G   E ++ EAT 
Sbjct: 268 GFLLQGLCRVRQADEARAM------LGRVPE---LNVVL--FNTVIGGCLAEGKLAEATE 316

Query: 139 LFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSI 198
           L++ M   G +PD  TY  L++G C+ G +  A+RL ++M    +        N+ +Y+I
Sbjct: 317 LYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGF------APNVVTYTI 370

Query: 199 IIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLG 258
           ++ S CK G+ D  + L  EM  +G+         +I+  C  G  +E  GL  EM   G
Sbjct: 371 VLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQG 430

Query: 259 PRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAR 318
             P++ ++N +I  LC   ++ EA  + E +++ G+  +  TYN+++      GR   A 
Sbjct: 431 CNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAV 490

Query: 319 EIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGL 378
            +   M   GC   VVSYN LI   CK  NV+ ++ L  ++   G++   ++YN L+S L
Sbjct: 491 RLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISEL 550

Query: 379 FQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGI 438
            +  +   A +L  +M    + PD+ TYN LI+GLCK   +  A+ L   L        I
Sbjct: 551 CKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDI 610

Query: 439 EIFNCLIDGLCKAGRLDNAWELFHK 463
             +N LI   CK   LD+A  L ++
Sbjct: 611 ITYNILISWHCKVRLLDDAAMLLNR 635



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 86/318 (27%), Positives = 157/318 (49%), Gaps = 15/318 (4%)

Query: 44  FLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVS 103
            +H  CK G I    A      M     +P + ++ ++  +  KN  +D   +   ++ +
Sbjct: 336 LMHGLCKLGRIG--SAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSA 393

Query: 104 IGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFC 163
            GL  +    N +I         LC + R+ EA  L + M + G  PD+ +Y T+I   C
Sbjct: 394 KGLTLNSQGYNGMIY-------ALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLC 446

Query: 164 RTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRG 223
               +  A  + + ++    E G+++  N  +Y+ II +L ++G    A  L  EM   G
Sbjct: 447 NNEQMEEAEHMFENLL----EEGVVA--NGITYNTIIHALLRDGRWQDAVRLAKEMILHG 500

Query: 224 INPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEAN 283
            +  VV    LI   C  GN +    L  EM + G +PN +++N++I  LCK  ++ +A 
Sbjct: 501 CSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDAL 560

Query: 284 GLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGY 343
            L + M+ +GL PD  TYN+L++G C +G +  A  +   +H++     +++YNILI+ +
Sbjct: 561 ELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILISWH 620

Query: 344 CKILNVEEAMSLYRQIIS 361
           CK+  +++A  L  + ++
Sbjct: 621 CKVRLLDDAAMLLNRAMA 638


>gi|297800104|ref|XP_002867936.1| hypothetical protein ARALYDRAFT_492917 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297313772|gb|EFH44195.1| hypothetical protein ARALYDRAFT_492917 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 817

 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 160/588 (27%), Positives = 264/588 (44%), Gaps = 70/588 (11%)

Query: 10  LFSSETVSKVKLSSLFKSPR---------QIAAVSSPE-----TQLNEFLHENCKSGIIN 55
           +F S+T   + L+SL ++            +    SP+     T +N F    CK G   
Sbjct: 214 MFPSKTTCNILLTSLVRATEFQKCCEAFHVVCKGVSPDVYLFTTAINAF----CKGG--K 267

Query: 56  LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNI 115
           + EA   F  M      P + ++N +   +  +  YD    F  K+V  G+ P  +T +I
Sbjct: 268 VEEAIELFSKMEEAGVVPNVVTYNTVIDGLGMSGRYDEAFMFKEKMVERGVEPTLITYSI 327

Query: 116 LINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVI---------------------- 153
           L+       +GL    RI +A  + K M   G  P+VI                      
Sbjct: 328 LV-------KGLTKAKRIGDAYCVLKEMTEKGFPPNVIVYNNLIDSLIEAGSLNKAIEIK 380

Query: 154 -------------TYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIII 200
                        TY TLI G+C++G   +A RL K+M+S  +        N  S++ +I
Sbjct: 381 DLMVSKGLSLTSSTYNTLIKGYCKSGQADIAERLLKEMLSIGF------NVNQGSFTSVI 434

Query: 201 DSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPR 260
             LC   + D A     EM  R ++P   + TTLI G C  G   +   L+++ L+ G  
Sbjct: 435 CLLCSHHMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKAVELWLKFLNKGFL 494

Query: 261 PNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREI 320
            +  T N ++  LC+ GK+ E   + + ++ RG   DR +YN+L+ G C   ++D A   
Sbjct: 495 VDTKTSNALLHGLCEAGKLEEGFRIQKEILGRGFVMDRVSYNTLISGCCGNKKLDEAFMF 554

Query: 321 FLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQ 380
              M  KG K    +Y+ILI G   +  VEEA+  +     NG+   V TY+ ++ G  +
Sbjct: 555 MDEMVKKGLKPDNYTYSILIRGLLNMNKVEEAIQFWGDCKRNGMIPDVYTYSVMIDGCCK 614

Query: 381 AGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEI 440
           A +    QKLFDEM   N++P+   YN LI   C++  +  A++L   ++          
Sbjct: 615 AERTEEGQKLFDEMMSNNLQPNTVVYNHLIGAYCRSGRLSMALELREDMKHKGISPNSAT 674

Query: 441 FNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYME 500
           +  LI G+    R++ A  L  ++  +GL P V  Y+ +I G  + G++ K    L  M 
Sbjct: 675 YTSLIKGMSIISRVEEAKLLLEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMH 734

Query: 501 KNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTF 548
                PN +T+  ++ G+ ++   ++   LLH+M   E+ +VPD  T+
Sbjct: 735 SKNVHPNKITYTVMIGGYARDGNVTEASRLLHEMR--EKGIVPDSITY 780



 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 113/373 (30%), Positives = 198/373 (53%), Gaps = 4/373 (1%)

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
           +++ ++  I++ CK G V++A ELF +M+  G+ P VV   T+I G   +G ++E     
Sbjct: 251 DVYLFTTAINAFCKGGKVEEAIELFSKMEEAGVVPNVVTYNTVIDGLGMSGRYDEAFMFK 310

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
            +M++ G  P L+T+++++  L K  +I +A  +L+ M ++G  P+   YN+L+D     
Sbjct: 311 EKMVERGVEPTLITYSILVKGLTKAKRIGDAYCVLKEMTEKGFPPNVIVYNNLIDSLIEA 370

Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
           G ++ A EI   M SKG   T  +YN LI GYCK    + A  L ++++S G      ++
Sbjct: 371 GSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKSGQADIAERLLKEMLSIGFNVNQGSF 430

Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
            +++  L        A +   EM L N+ P       LI GLCK+    +AV+L+     
Sbjct: 431 TSVICLLCSHHMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKAVELWLKFLN 490

Query: 432 NKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEK 491
             F    +  N L+ GLC+AG+L+  + +  ++  +G V   V+Y+ +I G C   KL++
Sbjct: 491 KGFLVDTKTSNALLHGLCEAGKLEEGFRIQKEILGRGFVMDRVSYNTLISGCCGNKKLDE 550

Query: 492 ANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERN-LVPDDTTFSI 550
           A  F+  M K G  P+  T++ L+ G L  NK  + ++      + +RN ++PD  T+S+
Sbjct: 551 AFMFMDEMVKKGLKPDNYTYSILIRGLLNMNKVEEAIQF---WGDCKRNGMIPDVYTYSV 607

Query: 551 VVDLLAKDEKYHE 563
           ++D   K E+  E
Sbjct: 608 MIDGCCKAERTEE 620



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 113/367 (30%), Positives = 185/367 (50%), Gaps = 3/367 (0%)

Query: 197 SIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLD 256
           +I++ SL +     K  E F  +  +G++P V + TT I+ FC  G  EE   LF +M +
Sbjct: 222 NILLTSLVRATEFQKCCEAF-HVVCKGVSPDVYLFTTAINAFCKGGKVEEAIELFSKMEE 280

Query: 257 LGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDT 316
            G  PN++T+N +ID L   G+ +EA    E M++RG+ P   TY+ L+ G     RI  
Sbjct: 281 AGVVPNVVTYNTVIDGLGMSGRYDEAFMFKEKMVERGVEPTLITYSILVKGLTKAKRIGD 340

Query: 317 AREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLS 376
           A  +   M  KG    V+ YN LI+   +  ++ +A+ +   ++S G+  T  TYNTL+ 
Sbjct: 341 AYCVLKEMTEKGFPPNVIVYNNLIDSLIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIK 400

Query: 377 GLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEF 436
           G  ++GQA  A++L  EM       +  ++  +I  LC ++    A++    + +     
Sbjct: 401 GYCKSGQADIAERLLKEMLSIGFNVNQGSFTSVICLLCSHHMFDSALRFVGEMLLRNMSP 460

Query: 437 GIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFL 496
           G  +   LI GLCK G+   A EL+ K   KG +    T + ++HGLC  GKLE+     
Sbjct: 461 GGGLLTTLISGLCKHGKHSKAVELWLKFLNKGFLVDTKTSNALLHGLCEAGKLEEGFRIQ 520

Query: 497 LYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLA 556
             +   G   + V++NTL+ G   N K  +    + +M   ++ L PD+ T+SI++  L 
Sbjct: 521 KEILGRGFVMDRVSYNTLISGCCGNKKLDEAFMFMDEMV--KKGLKPDNYTYSILIRGLL 578

Query: 557 KDEKYHE 563
              K  E
Sbjct: 579 NMNKVEE 585



 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 107/369 (28%), Positives = 175/369 (47%), Gaps = 13/369 (3%)

Query: 56  LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNI 115
            + A  F G M     SP       L   + K+  +   +  + K ++ G L D  T N 
Sbjct: 443 FDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKAVELWLKFLNKGFLVDTKTSNA 502

Query: 116 LINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLH 175
           L++       GLC   +++E   + K ++  G   D ++Y TLI+G C    L  A    
Sbjct: 503 LLH-------GLCEAGKLEEGFRIQKEILGRGFVMDRVSYNTLISGCCGNKKLDEAFMFM 555

Query: 176 KKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLI 235
            +MV    + GL  K + ++YSI+I  L     V++A + + + K  G+ P V   + +I
Sbjct: 556 DEMV----KKGL--KPDNYTYSILIRGLLNMNKVEEAIQFWGDCKRNGMIPDVYTYSVMI 609

Query: 236 HGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLN 295
            G C A   EE   LF EM+    +PN + +N +I   C+ G+++ A  L E M  +G++
Sbjct: 610 DGCCKAERTEEGQKLFDEMMSNNLQPNTVVYNHLIGAYCRSGRLSMALELREDMKHKGIS 669

Query: 296 PDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSL 355
           P+  TY SL+ G  ++ R++ A+ +   M  +G +  V  Y  LI+GY K+  + +   L
Sbjct: 670 PNSATYTSLIKGMSIISRVEEAKLLLEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECL 729

Query: 356 YRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCK 415
            R++ S  V    ITY  ++ G  + G    A +L  EM+   + PD  TY   I G  K
Sbjct: 730 LREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLHEMREKGIVPDSITYKEFIYGYLK 789

Query: 416 NNCVQEAVK 424
              V +A K
Sbjct: 790 QGGVLQAFK 798


>gi|296087920|emb|CBI35203.3| unnamed protein product [Vitis vinifera]
          Length = 394

 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 129/392 (32%), Positives = 195/392 (49%), Gaps = 60/392 (15%)

Query: 56  LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNI 115
           L++A   F  M HM P PPI  F  L  ++AK +HY  V+S  +K+ S G+ PD  TL I
Sbjct: 46  LDDALSSFHRMLHMHPPPPIFEFAKLLTSIAKMKHYSTVLSLSKKMDSFGIPPDVYTLTI 105

Query: 116 LINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLH 175
           +IN F       C  NR+  A  +   ++  G +PD  T+ TL+ G C  G +  AL + 
Sbjct: 106 VINSF-------CHLNRVDFALSVLAKILKLGHQPDTATFTTLVRGLCVVGKIGEALDVF 158

Query: 176 KKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLI 235
            KMV      G     N+                         M  +GI+P +    +LI
Sbjct: 159 DKMVG----EGFQPNPNLI------------------------MIAKGISPDIFTYNSLI 190

Query: 236 HGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLN 295
           H  C    W+ V  L  EM+     PN+++ N+++D LCK GK+ EA+ ++++MIQ G+ 
Sbjct: 191 HALCNLCEWKHVTTLLNEMVKSKIMPNVVSLNIVVDALCKEGKVTEAHDVVDMMIQGGVE 250

Query: 296 PDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSL 355
           PD  TY +LMDG+CL   +D A ++F  M   GC   VVSYN LIN            +L
Sbjct: 251 PDVVTYAALMDGHCLRSEMDEAVKVFDMMVRNGCVCNVVSYNTLIN------------AL 298

Query: 356 YRQIISNGVRQTVITYNTLLS------------GLFQAGQAGYAQKLFDEMKLYNVEPDL 403
           + ++++ G    ++TY+ LL              L +A + G A+ LF  +    ++PD+
Sbjct: 299 FNEMVACGQIPNLVTYSILLDYLCKNHRLAEAMALLKAIE-GTARDLFSNLAPRGLQPDV 357

Query: 404 STYNILIDGLCKNNCVQEAVKLFHMLEMNKFE 435
            T+NI+I GLCK   + EA KLF  ++ N  +
Sbjct: 358 WTHNIMIRGLCKRGLLDEASKLFREMDENDIK 389



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 107/390 (27%), Positives = 179/390 (45%), Gaps = 55/390 (14%)

Query: 131 NRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISK 190
           N + +A   F  M+     P +  +  L+    +  + S  L L KKM S          
Sbjct: 44  NTLDDALSSFHRMLHMHPPPPIFEFAKLLTSIAKMKHYSTVLSLSKKMDSFGI------P 97

Query: 191 TNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGL 250
            ++++ +I+I+S C    VD A  +  ++   G  P     TTL+ G C  G   E   +
Sbjct: 98  PDVYTLTIVINSFCHLNRVDFALSVLAKILKLGHQPDTATFTTLVRGLCVVGKIGEALDV 157

Query: 251 FIEMLDLG--PRPNLL-----------TFNVMIDCLCKGGKINEANGLLELMIQRGLNPD 297
           F +M+  G  P PNL+           T+N +I  LC   +      LL  M++  + P+
Sbjct: 158 FDKMVGEGFQPNPNLIMIAKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVKSKIMPN 217

Query: 298 RFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYR 357
             + N ++D  C  G++  A ++   M   G +  VV+Y  L++G+C    ++EA+ ++ 
Sbjct: 218 VVSLNIVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALMDGHCLRSEMDEAVKVFD 277

Query: 358 QIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNN 417
            ++ NG    V++YNTL++ LF            +EM      P+L TY+IL+D LCKN+
Sbjct: 278 MMVRNGCVCNVVSYNTLINALF------------NEMVACGQIPNLVTYSILLDYLCKNH 325

Query: 418 CVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYS 477
            + EA+ L   +E                          A +LF  L  +GL P V T++
Sbjct: 326 RLAEAMALLKAIE------------------------GTARDLFSNLAPRGLQPDVWTHN 361

Query: 478 IMIHGLCRKGKLEKANDFLLYMEKNGCAPN 507
           IMI GLC++G L++A+     M++N    N
Sbjct: 362 IMIRGLCKRGLLDEASKLFREMDENDIKSN 391



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 80/305 (26%), Positives = 143/305 (46%), Gaps = 27/305 (8%)

Query: 279 INEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNI 338
           +++A      M+     P  F +  L+     +    T   +   M S G    V +  I
Sbjct: 46  LDDALSSFHRMLHMHPPPPIFEFAKLLTSIAKMKHYSTVLSLSKKMDSFGIPPDVYTLTI 105

Query: 339 LINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMK--- 395
           +IN +C +  V+ A+S+  +I+  G +    T+ TL+ GL   G+ G A  +FD+M    
Sbjct: 106 VINSFCHLNRVDFALSVLAKILKLGHQPDTATFTTLVRGLCVVGKIGEALDVFDKMVGEG 165

Query: 396 ----------LYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLI 445
                        + PD+ TYN LI  LC     +    L + +  +K    +   N ++
Sbjct: 166 FQPNPNLIMIAKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVKSKIMPNVVSLNIVV 225

Query: 446 DGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCA 505
           D LCK G++  A ++   + Q G+ P VVTY+ ++ G C + ++++A      M +NGC 
Sbjct: 226 DALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALMDGHCLRSEMDEAVKVFDMMVRNGCV 285

Query: 506 PNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECS 565
            NVV++NTL++             L ++M    +  +P+  T+SI++D L K+ +  E  
Sbjct: 286 CNVVSYNTLINA------------LFNEMVACGQ--IPNLVTYSILLDYLCKNHRLAEAM 331

Query: 566 AVSKS 570
           A+ K+
Sbjct: 332 ALLKA 336



 Score = 48.5 bits (114), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 33/119 (27%), Positives = 59/119 (49%), Gaps = 19/119 (15%)

Query: 83  GAVAKNRHYDAVI-SFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWL-- 139
           G V     Y+ +I + + ++V+ G +P+ +T +IL++        LC  +R+ EA  L  
Sbjct: 283 GCVCNVVSYNTLINALFNEMVACGQIPNLVTYSILLDY-------LCKNHRLAEAMALLK 335

Query: 140 ---------FKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLIS 189
                    F N+   G++PDV T+  +I G C+ G L  A +L ++M   D ++   S
Sbjct: 336 AIEGTARDLFSNLAPRGLQPDVWTHNIMIRGLCKRGLLDEASKLFREMDENDIKSNSTS 394


>gi|357499677|ref|XP_003620127.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495142|gb|AES76345.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 412

 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 107/258 (41%), Positives = 160/258 (62%)

Query: 277 GKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSY 336
           G + EA  +L +M+++G+NP+  TY+SLMDGYCLV  ++ A+ IF +M  +G    V SY
Sbjct: 149 GNVKEAKNVLAMMMKQGINPNAVTYSSLMDGYCLVNEVNNAKGIFSTMSLRGVTANVWSY 208

Query: 337 NILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKL 396
           NI+ING+CKI   +EAM+L+ ++    +   V+TYN+L++GL ++G+  YA KL DEM  
Sbjct: 209 NIMINGFCKIKMTDEAMNLFEEMHCRKLIPDVVTYNSLINGLCKSGKISYALKLVDEMHD 268

Query: 397 YNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDN 456
               PD+ TY+ L+D LCKN+ V +A+ L   L+       +  +  LIDGLCK GRL++
Sbjct: 269 RGQPPDIITYSSLLDALCKNHQVDKAIALLKNLKDQGIRPNMYTYTILIDGLCKGGRLED 328

Query: 457 AWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMH 516
           A  +F  L  KG   TV TY++MIHG C KG  ++A   L  M+ N C PN +T+  ++ 
Sbjct: 329 AHNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEALALLSKMKDNSCFPNALTYEIIIR 388

Query: 517 GFLQNNKTSKVVELLHKM 534
               N++  K   LL +M
Sbjct: 389 SLFDNDENDKAENLLREM 406



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 85/265 (32%), Positives = 147/265 (55%), Gaps = 6/265 (2%)

Query: 130 ENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLIS 189
           E  +KEA  +   M+  G+ P+ +TY +L++G+C    ++ A    K + S     G+ +
Sbjct: 148 EGNVKEAKNVLAMMMKQGINPNAVTYSSLMDGYCLVNEVNNA----KGIFSTMSLRGVTA 203

Query: 190 KTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNG 249
             N++SY+I+I+  CK  + D+A  LF EM  R + P VV   +LI+G C +G       
Sbjct: 204 --NVWSYNIMINGFCKIKMTDEAMNLFEEMHCRKLIPDVVTYNSLINGLCKSGKISYALK 261

Query: 250 LFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYC 309
           L  EM D G  P+++T++ ++D LCK  ++++A  LL+ +  +G+ P+ +TY  L+DG C
Sbjct: 262 LVDEMHDRGQPPDIITYSSLLDALCKNHQVDKAIALLKNLKDQGIRPNMYTYTILIDGLC 321

Query: 310 LVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVI 369
             GR++ A  IF  +  KG   TV +Y ++I+G+C     +EA++L  ++  N      +
Sbjct: 322 KGGRLEDAHNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEALALLSKMKDNSCFPNAL 381

Query: 370 TYNTLLSGLFQAGQAGYAQKLFDEM 394
           TY  ++  LF   +   A+ L  EM
Sbjct: 382 TYEIIIRSLFDNDENDKAENLLREM 406



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 82/267 (30%), Positives = 137/267 (51%), Gaps = 4/267 (1%)

Query: 206 EGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLT 265
           EG V +AK +   M  +GINP  V  ++L+ G+C         G+F  M   G   N+ +
Sbjct: 148 EGNVKEAKNVLAMMMKQGINPNAVTYSSLMDGYCLVNEVNNAKGIFSTMSLRGVTANVWS 207

Query: 266 FNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMH 325
           +N+MI+  CK    +EA  L E M  R L PD  TYNSL++G C  G+I  A ++   MH
Sbjct: 208 YNIMINGFCKIKMTDEAMNLFEEMHCRKLIPDVVTYNSLINGLCKSGKISYALKLVDEMH 267

Query: 326 SKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAG 385
            +G    +++Y+ L++  CK   V++A++L + +   G+R  + TY  L+ GL + G+  
Sbjct: 268 DRGQPPDIITYSSLLDALCKNHQVDKAIALLKNLKDQGIRPNMYTYTILIDGLCKGGRLE 327

Query: 386 YAQKLFDEM--KLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNC 443
            A  +F+++  K YN+   ++TY ++I G C      EA+ L   ++ N        +  
Sbjct: 328 DAHNIFEDLLVKGYNIT--VNTYTVMIHGFCNKGLFDEALALLSKMKDNSCFPNALTYEI 385

Query: 444 LIDGLCKAGRLDNAWELFHKLPQKGLV 470
           +I  L      D A  L  ++  +GL+
Sbjct: 386 IIRSLFDNDENDKAENLLREMITRGLL 412



 Score =  122 bits (307), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 74/264 (28%), Positives = 135/264 (51%), Gaps = 13/264 (4%)

Query: 101 LVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLIN 160
           ++  G+ P+ +T + L++       G C+ N +  A  +F  M   GV  +V +Y  +IN
Sbjct: 161 MMKQGINPNAVTYSSLMD-------GYCLVNEVNNAKGIFSTMSLRGVTANVWSYNIMIN 213

Query: 161 GFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMK 220
           GFC+      A+ L ++M    +   LI   ++ +Y+ +I+ LCK G +  A +L  EM 
Sbjct: 214 GFCKIKMTDEAMNLFEEM----HCRKLIP--DVVTYNSLINGLCKSGKISYALKLVDEMH 267

Query: 221 GRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKIN 280
            RG  P ++  ++L+   C     ++   L   + D G RPN+ T+ ++ID LCKGG++ 
Sbjct: 268 DRGQPPDIITYSSLLDALCKNHQVDKAIALLKNLKDQGIRPNMYTYTILIDGLCKGGRLE 327

Query: 281 EANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILI 340
           +A+ + E ++ +G N    TY  ++ G+C  G  D A  +   M    C    ++Y I+I
Sbjct: 328 DAHNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEALALLSKMKDNSCFPNALTYEIII 387

Query: 341 NGYCKILNVEEAMSLYRQIISNGV 364
                    ++A +L R++I+ G+
Sbjct: 388 RSLFDNDENDKAENLLREMITRGL 411



 Score =  119 bits (299), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 74/239 (30%), Positives = 123/239 (51%), Gaps = 13/239 (5%)

Query: 56  LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNI 115
           +N A+  F  M+    +  + S+N++     K +  D  ++ + ++    L+PD +T N 
Sbjct: 186 VNNAKGIFSTMSLRGVTANVWSYNIMINGFCKIKMTDEAMNLFEEMHCRKLIPDVVTYNS 245

Query: 116 LINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLH 175
           LIN       GLC   +I  A  L   M   G  PD+ITY +L++  C+   +  A+ L 
Sbjct: 246 LIN-------GLCKSGKISYALKLVDEMHDRGQPPDIITYSSLLDALCKNHQVDKAIALL 298

Query: 176 KKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLI 235
           K +     + G+  + N+++Y+I+ID LCK G ++ A  +F ++  +G N  V   T +I
Sbjct: 299 KNL----KDQGI--RPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVKGYNITVNTYTVMI 352

Query: 236 HGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGL 294
           HGFC  G ++E   L  +M D    PN LT+ ++I  L    + ++A  LL  MI RGL
Sbjct: 353 HGFCNKGLFDEALALLSKMKDNSCFPNALTYEIIIRSLFDNDENDKAENLLREMITRGL 411



 Score = 95.9 bits (237), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 51/176 (28%), Positives = 94/176 (53%), Gaps = 2/176 (1%)

Query: 382 GQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIF 441
           G    A+ +   M    + P+  TY+ L+DG C  N V  A  +F  + +      +  +
Sbjct: 149 GNVKEAKNVLAMMMKQGINPNAVTYSSLMDGYCLVNEVNNAKGIFSTMSLRGVTANVWSY 208

Query: 442 NCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEK 501
           N +I+G CK    D A  LF ++  + L+P VVTY+ +I+GLC+ GK+  A   +  M  
Sbjct: 209 NIMINGFCKIKMTDEAMNLFEEMHCRKLIPDVVTYNSLINGLCKSGKISYALKLVDEMHD 268

Query: 502 NGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAK 557
            G  P+++T+++L+    +N++  K + LL  +   ++ + P+  T++I++D L K
Sbjct: 269 RGQPPDIITYSSLLDALCKNHQVDKAIALLKNLK--DQGIRPNMYTYTILIDGLCK 322


>gi|297836398|ref|XP_002886081.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297331921|gb|EFH62340.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 743

 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 153/519 (29%), Positives = 257/519 (49%), Gaps = 30/519 (5%)

Query: 59  ARYFFGYMTHMQPSPPISSFNLLF-GAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILI 117
           AR  F  M  +  S  + +FN+L  G   + +  DA+    R +    + PD +T N ++
Sbjct: 188 AREVFDDMVKIGVSLDVKTFNVLVNGYCLEGKLEDALGMLERMVSEFNVNPDNVTYNTIL 247

Query: 118 NCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKK 177
                K        R+ +   L  +M   G+ P+ +TY  L+ G+C+ G+L  A ++ + 
Sbjct: 248 KAMSKK-------GRLSDVKDLLLDMKRNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVE- 299

Query: 178 MVSGDYENGLISKTNIF----SYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTT 233
                    L+ +TNI     +Y+I+I+ +C  G + +  EL   MK   + P VV   T
Sbjct: 300 ---------LMKQTNILPDLCTYNILINGVCNAGSIREGLELMDVMKSLKLQPDVVTYNT 350

Query: 234 LIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINE-ANGLLELMIQR 292
           LI G    G   E   L  +M + G +PN +T N+ +  LCK  K  E    + EL+   
Sbjct: 351 LIDGCFELGLSLEAKKLMEQMENDGVKPNQVTHNISLKWLCKEEKREEVTRKVKELVEMH 410

Query: 293 GLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEA 352
           G +PD  TY++L+  Y  VG +  A E+   M  KG K   ++ N +++  CK   V+EA
Sbjct: 411 GFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKVDEA 470

Query: 353 MSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDG 412
            +L       G     +TY TL+ G F+  +   A +++DEMK   + P ++T+N LI G
Sbjct: 471 HNLLDSAHKRGYIVDEVTYGTLIMGYFREEKVEKAFEMWDEMKRIKITPTVTTFNSLIGG 530

Query: 413 LCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPT 472
           LC +   + A++ F  L  +        FN +I G CK GR++ A+E +++  +    P 
Sbjct: 531 LCHHGKTELAMEKFDELAESGLLPDDCTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPD 590

Query: 473 VVTYSIMIHGLCRKGKLEKANDFL--LYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVEL 530
             T +I+++GLC++G  EKA +F   L  E+     + VT+NT++  F ++ K  +  +L
Sbjct: 591 NYTCNILLNGLCKEGMTEKALNFFNTLITERE---VDTVTYNTMISAFCKDKKLKEAYDL 647

Query: 531 LHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSK 569
           L +M   E+ L PD  T++ ++  L +D K  E   + K
Sbjct: 648 LSEME--EKRLEPDRFTYNSIITSLMEDGKLSEADELLK 684



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 133/492 (27%), Positives = 246/492 (50%), Gaps = 12/492 (2%)

Query: 68  HMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGL 127
           H+ P P  + F++   A          +  ++K++ + L P+ LT N L+          
Sbjct: 124 HLSPPPSKALFDIALSAYLHAGKPHVALQVFQKMIRLKLKPNLLTCNTLLIGLVRYPSSF 183

Query: 128 CVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGL 187
                I  A  +F +M+  GV  DV T+  L+NG+C  G L  AL + ++MVS       
Sbjct: 184 S----IASAREVFDDMVKIGVSLDVKTFNVLVNGYCLEGKLEDALGMLERMVS----EFN 235

Query: 188 ISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEV 247
           ++  N+ +Y+ I+ ++ K+G +   K+L L+MK  G+ P  V    L++G+C  G+ +E 
Sbjct: 236 VNPDNV-TYNTILKAMSKKGRLSDVKDLLLDMKRNGLVPNRVTYNNLVYGYCKLGSLKEA 294

Query: 248 NGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDG 307
             +   M      P+L T+N++I+ +C  G I E   L+++M    L PD  TYN+L+DG
Sbjct: 295 FQIVELMKQTNILPDLCTYNILINGVCNAGSIREGLELMDVMKSLKLQPDVVTYNTLIDG 354

Query: 308 YCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIIS-NGVRQ 366
              +G    A+++   M + G K   V++NI +   CK    EE     ++++  +G   
Sbjct: 355 CFELGLSLEAKKLMEQMENDGVKPNQVTHNISLKWLCKEEKREEVTRKVKELVEMHGFSP 414

Query: 367 TVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLF 426
            ++TY+TL+    + G    A ++  EM    ++ +  T N ++D LCK   V EA  L 
Sbjct: 415 DIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKVDEAHNLL 474

Query: 427 HMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRK 486
                  +      +  LI G  +  +++ A+E++ ++ +  + PTV T++ +I GLC  
Sbjct: 475 DSAHKRGYIVDEVTYGTLIMGYFREEKVEKAFEMWDEMKRIKITPTVTTFNSLIGGLCHH 534

Query: 487 GKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDT 546
           GK E A +    + ++G  P+  TFN+++ G+ +  +  K  E  ++    + +  PD+ 
Sbjct: 535 GKTELAMEKFDELAESGLLPDDCTFNSIILGYCKEGRVEKAFEFYNESI--KHSFKPDNY 592

Query: 547 TFSIVVDLLAKD 558
           T +I+++ L K+
Sbjct: 593 TCNILLNGLCKE 604



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 136/467 (29%), Positives = 235/467 (50%), Gaps = 19/467 (4%)

Query: 72  SPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVEN 131
           +P   ++N +  A++K      V      +   GL+P+ +T N L+        G C   
Sbjct: 237 NPDNVTYNTILKAMSKKGRLSDVKDLLLDMKRNGLVPNRVTYNNLV-------YGYCKLG 289

Query: 132 RIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKT 191
            +KEA  + + M    + PD+ TY  LING C  G++   L L   M S      L  + 
Sbjct: 290 SLKEAFQIVELMKQTNILPDLCTYNILINGVCNAGSIREGLELMDVMKS------LKLQP 343

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
           ++ +Y+ +ID   + GL  +AK+L  +M+  G+ P  V     +   C     EEV    
Sbjct: 344 DVVTYNTLIDGCFELGLSLEAKKLMEQMENDGVKPNQVTHNISLKWLCKEEKREEVTRKV 403

Query: 252 IEMLDL-GPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCL 310
            E++++ G  P+++T++ +I    K G ++ A  ++  M Q+G+  +  T N+++D  C 
Sbjct: 404 KELVEMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCK 463

Query: 311 VGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVIT 370
             ++D A  +  S H +G     V+Y  LI GY +   VE+A  ++ ++    +  TV T
Sbjct: 464 ERKVDEAHNLLDSAHKRGYIVDEVTYGTLIMGYFREEKVEKAFEMWDEMKRIKITPTVTT 523

Query: 371 YNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLE 430
           +N+L+ GL   G+   A + FDE+    + PD  T+N +I G CK   V++A + ++  E
Sbjct: 524 FNSLIGGLCHHGKTELAMEKFDELAESGLLPDDCTFNSIILGYCKEGRVEKAFEFYN--E 581

Query: 431 MNKFEFGIEIFNC--LIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGK 488
             K  F  + + C  L++GLCK G  + A   F+ L  +  V T VTY+ MI   C+  K
Sbjct: 582 SIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLITEREVDT-VTYNTMISAFCKDKK 640

Query: 489 LEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMA 535
           L++A D L  ME+    P+  T+N+++   +++ K S+  ELL K +
Sbjct: 641 LKEAYDLLSEMEEKRLEPDRFTYNSIITSLMEDGKLSEADELLKKFS 687



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 130/448 (29%), Positives = 195/448 (43%), Gaps = 79/448 (17%)

Query: 106 LLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRT 165
           +LPD  T NILIN       G+C    I+E   L   M +  ++PDV+TY TLI+G    
Sbjct: 306 ILPDLCTYNILIN-------GVCNAGSIREGLELMDVMKSLKLQPDVVTYNTLIDGCFEL 358

Query: 166 GNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEG----LVDKAKELFLEMKG 221
           G     L L  K +    EN  + K N  +++I +  LCKE     +  K KEL +EM  
Sbjct: 359 G-----LSLEAKKLMEQMENDGV-KPNQVTHNISLKWLCKEEKREEVTRKVKEL-VEM-- 409

Query: 222 RGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINE 281
            G +P +V   TLI  +   G+      +  EM   G + N +T N ++D LCK  K++E
Sbjct: 410 HGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKVDE 469

Query: 282 ANGLLELMIQRG-----------------------------------LNPDRFTYNSLMD 306
           A+ LL+   +RG                                   + P   T+NSL+ 
Sbjct: 470 AHNLLDSAHKRGYIVDEVTYGTLIMGYFREEKVEKAFEMWDEMKRIKITPTVTTFNSLIG 529

Query: 307 GYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQ 366
           G C  G+ + A E F  +   G      ++N +I GYCK   VE+A   Y + I +  + 
Sbjct: 530 GLCHHGKTELAMEKFDELAESGLLPDDCTFNSIILGYCKEGRVEKAFEFYNESIKHSFKP 589

Query: 367 TVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLF 426
              T N LL+GL + G    A   F+ + +   E D  TYN +I   CK+  ++EA  L 
Sbjct: 590 DNYTCNILLNGLCKEGMTEKALNFFNTL-ITEREVDTVTYNTMISAFCKDKKLKEAYDLL 648

Query: 427 HMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQK------------------- 467
             +E  + E     +N +I  L + G+L  A EL  K   K                   
Sbjct: 649 SEMEEKRLEPDRFTYNSIITSLMEDGKLSEADELLKKFSGKFGSMKRNLHLETEKNPATS 708

Query: 468 ----GLVPTVVTYSIMIHGLCRKGKLEK 491
                L    + YS +I+ LC +G+L++
Sbjct: 709 ESKEELKTEAIAYSDVINELCSRGRLKE 736



 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 97/366 (26%), Positives = 179/366 (48%), Gaps = 42/366 (11%)

Query: 248 NGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDG 307
           N L    L L P P+   F++ +      GK + A  + + MI+  L P+  T N+L+ G
Sbjct: 116 NSLLHPNLHLSPPPSKALFDIALSAYLHAGKPHVALQVFQKMIRLKLKPNLLTCNTLLIG 175

Query: 308 ---YCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIIS--- 361
              Y     I +ARE+F  M   G    V ++N+L+NGYC    +E+A+ +  +++S   
Sbjct: 176 LVRYPSSFSIASAREVFDDMVKIGVSLDVKTFNVLVNGYCLEGKLEDALGMLERMVSEFN 235

Query: 362 ---------------------------------NGVRQTVITYNTLLSGLFQAGQAGYAQ 388
                                            NG+    +TYN L+ G  + G    A 
Sbjct: 236 VNPDNVTYNTILKAMSKKGRLSDVKDLLLDMKRNGLVPNRVTYNNLVYGYCKLGSLKEAF 295

Query: 389 KLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGL 448
           ++ + MK  N+ PDL TYNILI+G+C    ++E ++L  +++  K +  +  +N LIDG 
Sbjct: 296 QIVELMKQTNILPDLCTYNILINGVCNAGSIREGLELMDVMKSLKLQPDVVTYNTLIDGC 355

Query: 449 CKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYM-EKNGCAPN 507
            + G    A +L  ++   G+ P  VT++I +  LC++ K E+    +  + E +G +P+
Sbjct: 356 FELGLSLEAKKLMEQMENDGVKPNQVTHNISLKWLCKEEKREEVTRKVKELVEMHGFSPD 415

Query: 508 VVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAV 567
           +VT++TL+  +L+    S  +E++ +M   ++ +  +  T + ++D L K+ K  E   +
Sbjct: 416 IVTYHTLIKAYLKVGDLSGALEMMREMG--QKGIKMNTITLNTILDALCKERKVDEAHNL 473

Query: 568 SKSSYR 573
             S+++
Sbjct: 474 LDSAHK 479


>gi|125557843|gb|EAZ03379.1| hypothetical protein OsI_25524 [Oryza sativa Indica Group]
          Length = 716

 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 136/509 (26%), Positives = 252/509 (49%), Gaps = 16/509 (3%)

Query: 55  NLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLN 114
            L++A      M  ++  P  S++ +L GA+A+ R  +  +   R++  +G         
Sbjct: 25  RLDDAVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPERALELLRQMQEVGY-------E 77

Query: 115 ILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRL 174
           + ++ F    R L  E ++ +A  L   +    + PD++ Y   I+ F + GN+ +A + 
Sbjct: 78  VGVHLFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMACKF 137

Query: 175 HKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTL 234
             ++ +     GL  K +  SY+ +I  LCK G + +A+ELF +M+     P      T+
Sbjct: 138 FHELKA----QGL--KPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTM 191

Query: 235 IHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGL 294
           I G+  AG +E+   L   + + G  P++++FN ++ CL K  K++EA  L E+M ++  
Sbjct: 192 IMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVM-KKDA 250

Query: 295 NPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMS 354
            P+  TYN ++D  CL GR++ A  I   M        +++ NI+++  CK   +EEA  
Sbjct: 251 EPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYK 310

Query: 355 LYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLC 414
           ++      G     +TY +L+ GL + GQ   A +LF++M       +   Y  LI    
Sbjct: 311 IFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFF 370

Query: 415 KNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVV 474
            +   ++  K+F  L     +  + + N  +D + KAG ++    +F  +   G +P V 
Sbjct: 371 IHGRKEDGHKVFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVR 430

Query: 475 TYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKM 534
           +YSI+IHGL + G+  + ++    M++ G A +   +N ++ GF ++ K  K  E+L +M
Sbjct: 431 SYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEM 490

Query: 535 AEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
              E+ + P   T+  +VD LAK ++  E
Sbjct: 491 --KEKCVQPTVATYGAIVDGLAKIDRLDE 517



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 126/470 (26%), Positives = 232/470 (49%), Gaps = 14/470 (2%)

Query: 55  NLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLN 114
            ++EA   F  M      P  S++N++   +      +       ++    L P+ LT+N
Sbjct: 235 KVDEALSLFEVMKK-DAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVN 293

Query: 115 ILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRL 174
           I+++        LC   +++EA  +F++    G  PD +TY +LI+G  + G +  A RL
Sbjct: 294 IMVD-------RLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRL 346

Query: 175 HKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTL 234
            +KM+   +        N   Y+ +I +    G  +   ++F E+  RG  P + +  T 
Sbjct: 347 FEKMLDAGH------NANPVVYTSLIRNFFIHGRKEDGHKVFKELIRRGCKPDLTLLNTY 400

Query: 235 IHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGL 294
           +     AG  E+   +F ++   G  P++ +++++I  L K G+  E + +   M Q+G 
Sbjct: 401 MDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGF 460

Query: 295 NPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMS 354
             D   YN+++DG+C  G++  A EI   M  K  + TV +Y  +++G  KI  ++EA  
Sbjct: 461 ALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYM 520

Query: 355 LYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLC 414
           L+ +  S G+   V+ Y++L+ G  + G+   A  + +EM    + P++ T+N L+D L 
Sbjct: 521 LFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALV 580

Query: 415 KNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVV 474
           K   + EA+  F  ++  K       ++ LI+GLC+  + + A+  +  + ++GLVP VV
Sbjct: 581 KAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVV 640

Query: 475 TYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKT 524
           TY+ MI GL + G +  A       + NG  P+  +FN L+ G    N+ 
Sbjct: 641 TYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIEGMSNANRA 690



 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 145/540 (26%), Positives = 243/540 (45%), Gaps = 53/540 (9%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CK+G   L EA   F  M   +  P   ++N +         ++       +L   G +P
Sbjct: 161 CKAG--RLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIP 218

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
             ++ N ++ C G K        ++ EA  LF+ M      P+  TY  +I+  C  G +
Sbjct: 219 SVVSFNSILTCLGKK-------RKVDEALSLFEVMKK-DAEPNSSTYNIIIDMLCLGGRV 270

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
             A R+  +M     E+  +   N+ + +I++D LCK   +++A ++F     RG NP  
Sbjct: 271 EEAYRILDEM-----EHASLF-PNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDC 324

Query: 229 VVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLEL 288
           V   +LI G    G  +E   LF +MLD G   N + +  +I      G+  + + + + 
Sbjct: 325 VTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKVFKE 384

Query: 289 MIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILN 348
           +I+RG  PD    N+ MD     G ++  R IF  + S G    V SY+ILI+G  K   
Sbjct: 385 LIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQ 444

Query: 349 VEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNI 408
             E  +++  +   G       YN ++ G  ++G+   A ++ +EMK   V+P ++TY  
Sbjct: 445 ARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGA 504

Query: 409 LIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKG 468
           ++DGL K + + EA  LF   +    E  + +++ LIDG  K GR+D A+ +  ++ +KG
Sbjct: 505 IVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKG 564

Query: 469 LVPTVVT-----------------------------------YSIMIHGLCRKGKLEKAN 493
           L P V T                                   YSI+I+GLCR  K  KA 
Sbjct: 565 LTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAF 624

Query: 494 DFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
            F   M+K G  PNVVT+ T++ G  +    +    L  +        +PD  +F+ +++
Sbjct: 625 VFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERF--KANGGIPDAASFNALIE 682



 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 157/527 (29%), Positives = 241/527 (45%), Gaps = 51/527 (9%)

Query: 72  SPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVEN 131
            P I  +N+      K  + D    F+ +L + GL PD ++   +I         LC   
Sbjct: 112 EPDIVLYNVCIDCFGKAGNVDMACKFFHELKAQGLKPDDVSYTSMIWV-------LCKAG 164

Query: 132 RIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKT 191
           R+ EA  LF  M A    P    Y T+I G+   G    A +L +++     E G I   
Sbjct: 165 RLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERL----RERGCIP-- 218

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
           ++ S++ I+  L K+  VD+A  LF  MK +   P       +I   C  G  EE   + 
Sbjct: 219 SVVSFNSILTCLGKKRKVDEALSLFEVMK-KDAEPNSSTYNIIIDMLCLGGRVEEAYRIL 277

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
            EM      PNLLT N+M+D LCK  K+ EA  + E   QRG NPD  TY SL+DG    
Sbjct: 278 DEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKK 337

Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGY--------------------CK----IL 347
           G++D A  +F  M   G     V Y  LI  +                    CK    +L
Sbjct: 338 GQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKVFKELIRRGCKPDLTLL 397

Query: 348 N-----------VEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKL 396
           N           VE+   ++  I S G    V +Y+ L+ GL +AGQA     +F  MK 
Sbjct: 398 NTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQ 457

Query: 397 YNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDN 456
                D   YN ++DG CK+  V +A ++   ++    +  +  +  ++DGL K  RLD 
Sbjct: 458 QGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDE 517

Query: 457 AWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMH 516
           A+ LF +   KG+   VV YS +I G  + G++++A   L  M K G  PNV T+N+L+ 
Sbjct: 518 AYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLD 577

Query: 517 GFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
             ++  + ++ +     M   E    P+  T+SI+++ L + +KY++
Sbjct: 578 ALVKAEEINEALVCFQSM--KEMKCPPNTYTYSILINGLCRVQKYNK 622



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 121/442 (27%), Positives = 202/442 (45%), Gaps = 9/442 (2%)

Query: 126 GLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYEN 185
            L    R+ +A      M     RP    Y  LI           AL L ++M    YE 
Sbjct: 19  ALVRARRLDDAVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPERALELLRQMQEVGYEV 78

Query: 186 GLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWE 245
           G      +  ++ ++ +L +EG V  A  L  E+KG  + P +V+    I  F  AGN +
Sbjct: 79  G------VHLFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVD 132

Query: 246 EVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLM 305
                F E+   G +P+ +++  MI  LCK G++ EA  L   M      P  + YN+++
Sbjct: 133 MACKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMI 192

Query: 306 DGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVR 365
            GY   GR + A ++   +  +GC  +VVS+N ++    K   V+EA+SL+ +++     
Sbjct: 193 MGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLF-EVMKKDAE 251

Query: 366 QTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKL 425
               TYN ++  L   G+   A ++ DEM+  ++ P+L T NI++D LCK   ++EA K+
Sbjct: 252 PNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKI 311

Query: 426 FHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCR 485
           F              +  LIDGL K G++D A+ LF K+   G     V Y+ +I     
Sbjct: 312 FESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFI 371

Query: 486 KGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDD 545
            G+ E  +     + + GC P++   NT M    +  +  K   +   +       +PD 
Sbjct: 372 HGRKEDGHKVFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIR--SYGFLPDV 429

Query: 546 TTFSIVVDLLAKDEKYHECSAV 567
            ++SI++  L K  +  E S +
Sbjct: 430 RSYSILIHGLTKAGQARETSNI 451



 Score =  108 bits (271), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 76/304 (25%), Positives = 146/304 (48%), Gaps = 4/304 (1%)

Query: 273 LCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHT 332
           L +  ++++A   + +M +    P    Y  L+       R + A E+   M   G +  
Sbjct: 20  LVRARRLDDAVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPERALELLRQMQEVGYEVG 79

Query: 333 VVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFD 392
           V  +  L+    +   V +A++L  ++  + +   ++ YN  +    +AG    A K F 
Sbjct: 80  VHLFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMACKFFH 139

Query: 393 EMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAG 452
           E+K   ++PD  +Y  +I  LCK   + EA +LF  +E  +       +N +I G   AG
Sbjct: 140 ELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAG 199

Query: 453 RLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFN 512
           R ++A++L  +L ++G +P+VV+++ ++  L +K K+++A      M+K+   PN  T+N
Sbjct: 200 RFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDA-EPNSSTYN 258

Query: 513 TLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKS-S 571
            ++       +  +   +L +M     +L P+  T +I+VD L K  K  E   + +S S
Sbjct: 259 IIIDMLCLGGRVEEAYRILDEMEHA--SLFPNLLTVNIMVDRLCKARKLEEAYKIFESAS 316

Query: 572 YRAC 575
            R C
Sbjct: 317 QRGC 320



 Score = 48.5 bits (114), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 31/149 (20%), Positives = 68/149 (45%), Gaps = 2/149 (1%)

Query: 409 LIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKG 468
           L   L +   + +AV    ++   KF      +  LI  L +A R + A EL  ++ + G
Sbjct: 16  LAAALVRARRLDDAVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPERALELLRQMQEVG 75

Query: 469 LVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVV 528
               V  ++ ++  L R+G++  A   +  ++ +   P++V +N  +  F +        
Sbjct: 76  YEVGVHLFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAC 135

Query: 529 ELLHKMAEPERNLVPDDTTFSIVVDLLAK 557
           +  H++    + L PDD +++ ++ +L K
Sbjct: 136 KFFHEL--KAQGLKPDDVSYTSMIWVLCK 162


>gi|414590400|tpg|DAA40971.1| TPA: hypothetical protein ZEAMMB73_404079 [Zea mays]
          Length = 745

 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 122/358 (34%), Positives = 187/358 (52%), Gaps = 5/358 (1%)

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
           N+ SY+I++ +LC  G V  A++LF EM      P VV    LIHG C  G  E    L 
Sbjct: 258 NVCSYNILLKALCDAGRVKDARQLFDEMAS---APDVVTYGILIHGHCALGELENAVKLL 314

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
            EM+  G  PN   +  ++  LC  G I++A  ++E M+QR +  D   Y +++ G+C  
Sbjct: 315 DEMVAGGVEPNATVYTSVVALLCDKGWISDALRVVEDMVQRKVILDEALYTTVLSGFCNK 374

Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
           G + +AR  F  M  KG     V+Y  +ING C+ + +EEA  L +++ +  +    +TY
Sbjct: 375 GDLVSARRWFDEMQRKGLATDGVTYTTMINGLCRAVELEEAEKLLQEMWARRLDVDEVTY 434

Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
             L+ G  + G+   A ++ + M    V P++ TY  L DGLCK   VQ A +L H +  
Sbjct: 435 TVLIDGYCKRGKMAEAFQMHNAMVQRGVTPNVVTYTALTDGLCKQGDVQAANELLHEMSN 494

Query: 432 NKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEK 491
              E     +N LI+GLCKAG L+ A      +    L P V TY+ +I  LC+ G L++
Sbjct: 495 KGLELNACTYNSLINGLCKAGYLEQAMRTMADMDTACLKPDVYTYTTLIDALCKSGDLDR 554

Query: 492 ANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFS 549
           A+  L  M   G  P +VT+N LM+GF  + +     +LL  M   E+N+ P+  T++
Sbjct: 555 AHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKKLLDWML--EKNIHPNAATYN 610



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 130/440 (29%), Positives = 219/440 (49%), Gaps = 11/440 (2%)

Query: 125 RGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYE 184
           + LC   R+K+A  LF  M +    PDV+TYG LI+G C  G L  A++L  +MV+G  E
Sbjct: 267 KALCDAGRVKDARQLFDEMASA---PDVVTYGILIHGHCALGELENAVKLLDEMVAGGVE 323

Query: 185 NGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNW 244
                  N   Y+ ++  LC +G +  A  +  +M  R +     + TT++ GFC  G+ 
Sbjct: 324 ------PNATVYTSVVALLCDKGWISDALRVVEDMVQRKVILDEALYTTVLSGFCNKGDL 377

Query: 245 EEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSL 304
                 F EM   G   + +T+  MI+ LC+  ++ EA  LL+ M  R L+ D  TY  L
Sbjct: 378 VSARRWFDEMQRKGLATDGVTYTTMINGLCRAVELEEAEKLLQEMWARRLDVDEVTYTVL 437

Query: 305 MDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGV 364
           +DGYC  G++  A ++  +M  +G    VV+Y  L +G CK  +V+ A  L  ++ + G+
Sbjct: 438 IDGYCKRGKMAEAFQMHNAMVQRGVTPNVVTYTALTDGLCKQGDVQAANELLHEMSNKGL 497

Query: 365 RQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVK 424
                TYN+L++GL +AG    A +   +M    ++PD+ TY  LID LCK+  +  A  
Sbjct: 498 ELNACTYNSLINGLCKAGYLEQAMRTMADMDTACLKPDVYTYTTLIDALCKSGDLDRAHS 557

Query: 425 LFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLC 484
           L   +     +  I  +N L++G C +GR++   +L   + +K + P   TY+ ++   C
Sbjct: 558 LLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKKLLDWMLEKNIHPNAATYNSLMKQYC 617

Query: 485 RKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPD 544
            +  ++   +    M      PN  T+N L+ G  +     + +    +M +    L   
Sbjct: 618 IENNMKSTTEIYKGMRSRDVGPNENTYNILIKGHCKARNMKEALYFHDEMIQKGFRLTA- 676

Query: 545 DTTFSIVVDLLAKDEKYHEC 564
            T++S ++ LL K +K+ E 
Sbjct: 677 -TSYSALIRLLNKKKKFVEA 695



 Score =  205 bits (521), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 150/534 (28%), Positives = 246/534 (46%), Gaps = 31/534 (5%)

Query: 22  SSLFKSPRQIAAVSSPETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLL 81
           + L +  RQ     SPE   N  L        + L+EA   F  + H      + S+N+L
Sbjct: 217 APLLRRLRQYGISPSPEA-CNAVLSR------LPLDEAIELFQELPHKN----VCSYNIL 265

Query: 82  FGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFK 141
             A+            + ++ S    PD +T  ILI+       G C    ++ A  L  
Sbjct: 266 LKALCDAGRVKDARQLFDEMASA---PDVVTYGILIH-------GHCALGELENAVKLLD 315

Query: 142 NMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIID 201
            M+A GV P+   Y +++   C  G +S ALR+ + MV    +  +I    +  Y+ ++ 
Sbjct: 316 EMVAGGVEPNATVYTSVVALLCDKGWISDALRVVEDMV----QRKVILDEAL--YTTVLS 369

Query: 202 SLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRP 261
             C +G +  A+  F EM+ +G+    V  TT+I+G C A   EE   L  EM       
Sbjct: 370 GFCNKGDLVSARRWFDEMQRKGLATDGVTYTTMINGLCRAVELEEAEKLLQEMWARRLDV 429

Query: 262 NLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIF 321
           + +T+ V+ID  CK GK+ EA  +   M+QRG+ P+  TY +L DG C  G +  A E+ 
Sbjct: 430 DEVTYTVLIDGYCKRGKMAEAFQMHNAMVQRGVTPNVVTYTALTDGLCKQGDVQAANELL 489

Query: 322 LSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQA 381
             M +KG +    +YN LING CK   +E+AM     + +  ++  V TY TL+  L ++
Sbjct: 490 HEMSNKGLELNACTYNSLINGLCKAGYLEQAMRTMADMDTACLKPDVYTYTTLIDALCKS 549

Query: 382 GQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFH-MLEMNKFEFGIEI 440
           G    A  L  EM    ++P + TYN+L++G C +  V+   KL   MLE N        
Sbjct: 550 GDLDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKKLLDWMLEKN-IHPNAAT 608

Query: 441 FNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYME 500
           +N L+   C    + +  E++  +  + + P   TY+I+I G C+   +++A  F   M 
Sbjct: 609 YNSLMKQYCIENNMKSTTEIYKGMRSRDVGPNENTYNILIKGHCKARNMKEALYFHDEMI 668

Query: 501 KNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDL 554
           + G      +++ L+    +  K  +  EL H M   +  L  +   +   +DL
Sbjct: 669 QKGFRLTATSYSALIRLLNKKKKFVEARELFHDMR--KEGLTAESDVYDFYIDL 720


>gi|357120470|ref|XP_003561950.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Brachypodium distachyon]
          Length = 925

 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 139/467 (29%), Positives = 237/467 (50%), Gaps = 17/467 (3%)

Query: 55  NLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLN 114
           +L+ A   F  M      P  ++++ L   +  +   +  + F  ++   G+LP   T  
Sbjct: 278 DLDSAFEIFNRMDEEGCEPNAATYSTLINGLCNSGRVNEALDFISEMTRHGVLPTVHTFT 337

Query: 115 ILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRL 174
             I         LC   RI++A  +F +M   G +P+V TY +LI+G  R   +++ L  
Sbjct: 338 API-------VALCDMGRIEDAWKIFIDMKKKGCKPNVYTYTSLISGQ-RVSRMAIGL-F 388

Query: 175 HKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTL 234
           H+  +S D   G++   N  +Y+ +++ L +   +D A  +F  M   G  P       L
Sbjct: 389 HR--MSRD---GVVP--NTVTYNALMNVLMENMEIDSALIVFNMMGKHGCLPNTSSYNEL 441

Query: 235 IHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGL 294
           I G+C  G+ E+   +   ML   P P L+T+N++I   C  G  + A  +LELM   G 
Sbjct: 442 IRGYCTIGDTEKAMSMLTNMLKGRPTPTLVTYNIIIKGYCDSGDTDVAIRVLELMKANGC 501

Query: 295 NPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMS 354
            PD ++Y  L+ G+C + +++ A  +F  M  +G     V+Y  LI+GYCK   ++ A  
Sbjct: 502 QPDEWSYTELISGFCKISKMELASGMFNEMMDRGLCPNEVTYTALISGYCKDEKLDCAAR 561

Query: 355 LYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLC 414
           +  ++  +G R  V TYN L+ GL +      A++L   M    + PD+ TY+ +I+GLC
Sbjct: 562 MLERMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMLEEKISPDVVTYSTVINGLC 621

Query: 415 KNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVV 474
            N  +  A+++F+ +  +     +  ++ LI  L + GR++ A E+F +L ++GL+P  V
Sbjct: 622 NNGAIPLALEMFNKMVKHGCLPNLHTYSSLIQALGQEGRVEEAEEMFSELKKQGLIPDEV 681

Query: 475 TYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQN 521
           TY  MI      GK+++A DFL  M   GC P + T++ L+ G LQN
Sbjct: 682 TYVKMIEVCVMSGKVDRAFDFLGEMINAGCQPTLQTYDVLIKG-LQN 727



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 122/414 (29%), Positives = 209/414 (50%), Gaps = 11/414 (2%)

Query: 140 FKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSII 199
           +  ++  G++P+++ Y ++IN  C+ GN+  A    + +++  +++G+  K + F+Y+ +
Sbjct: 216 YHQILREGLQPNLLIYNSVINALCKDGNVRDA----ESIINKVFKSGM--KPDTFTYTSM 269

Query: 200 IDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGP 259
           I   C+   +D A E+F  M   G  P     +TLI+G C +G   E      EM   G 
Sbjct: 270 ILGYCRNRDLDSAFEIFNRMDEEGCEPNAATYSTLINGLCNSGRVNEALDFISEMTRHGV 329

Query: 260 RPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTARE 319
            P + TF   I  LC  G+I +A  +   M ++G  P+ +TY SL+ G   V R+  A  
Sbjct: 330 LPTVHTFTAPIVALCDMGRIEDAWKIFIDMKKKGCKPNVYTYTSLISGQ-RVSRM--AIG 386

Query: 320 IFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLF 379
           +F  M   G     V+YN L+N   + + ++ A+ ++  +  +G      +YN L+ G  
Sbjct: 387 LFHRMSRDGVVPNTVTYNALMNVLMENMEIDSALIVFNMMGKHGCLPNTSSYNELIRGYC 446

Query: 380 QAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIE 439
             G    A  +   M      P L TYNI+I G C +     A+++  +++ N  +    
Sbjct: 447 TIGDTEKAMSMLTNMLKGRPTPTLVTYNIIIKGYCDSGDTDVAIRVLELMKANGCQPDEW 506

Query: 440 IFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYM 499
            +  LI G CK  +++ A  +F+++  +GL P  VTY+ +I G C+  KL+ A   L  M
Sbjct: 507 SYTELISGFCKISKMELASGMFNEMMDRGLCPNEVTYTALISGYCKDEKLDCAARMLERM 566

Query: 500 EKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
           +++GC PNV T+N L+HG  + N  S   EL   M   E  + PD  T+S V++
Sbjct: 567 KRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVML--EEKISPDVVTYSTVIN 618



 Score =  169 bits (427), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 131/514 (25%), Positives = 231/514 (44%), Gaps = 37/514 (7%)

Query: 62  FFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFG 121
            F  M+     P   ++N L   + +N   D+ +  +  +   G LP+  + N LI    
Sbjct: 387 LFHRMSRDGVVPNTVTYNALMNVLMENMEIDSALIVFNMMGKHGCLPNTSSYNELI---- 442

Query: 122 NKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSG 181
              RG C     ++A  +  NM+     P ++TY  +I G+C +G+  VA+R+ + M + 
Sbjct: 443 ---RGYCTIGDTEKAMSMLTNMLKGRPTPTLVTYNIIIKGYCDSGDTDVAIRVLELMKA- 498

Query: 182 DYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCA 241
              NG   + + +SY+ +I   CK   ++ A  +F EM  RG+ P  V  T LI G+C  
Sbjct: 499 ---NG--CQPDEWSYTELISGFCKISKMELASGMFNEMMDRGLCPNEVTYTALISGYCKD 553

Query: 242 GNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTY 301
              +    +   M   G RPN+ T+NV+I  L K    + A  L ++M++  ++PD  TY
Sbjct: 554 EKLDCAARMLERMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMLEEKISPDVVTY 613

Query: 302 NSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIIS 361
           +++++G C  G I  A E+F  M   GC   + +Y+ LI    +   VEEA  ++ ++  
Sbjct: 614 STVINGLCNNGAIPLALEMFNKMVKHGCLPNLHTYSSLIQALGQEGRVEEAEEMFSELKK 673

Query: 362 NGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQE 421
            G+    +TY  ++     +G+   A     EM     +P L TY++LI GL       +
Sbjct: 674 QGLIPDEVTYVKMIEVCVMSGKVDRAFDFLGEMINAGCQPTLQTYDVLIKGLQNEMVYHK 733

Query: 422 AVKL--------FHMLEMNK--------------FEFGIEIFNCLIDGLCKAGRLDNAWE 459
            V L        F    +NK              FE   ++++ L+  L ++GR   A  
Sbjct: 734 LVALPNAASTSTFDDQIINKDVISVLSSKLAELDFELSRQLYDALLSRLSRSGRWFEANN 793

Query: 460 LFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFL 519
           L+  +  +   P   TY   +  L R  K++ A D   +M    C  ++  +  L+    
Sbjct: 794 LYRSMVSQSQCPNQDTYKHFLISLLRALKVDLAMDVFKHMSDQRCELHLTGYKELICTLC 853

Query: 520 QNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
           Q ++  +   +  KM    R L  D+  ++I+++
Sbjct: 854 QLHRRKEARFVFEKML--SRALNADEIVWTILIN 885



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 113/387 (29%), Positives = 183/387 (47%), Gaps = 42/387 (10%)

Query: 216 FLEM-KGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLC 274
           +L+M   RG    +   TTL+           V   + ++L  G +PNLL +N +I+ LC
Sbjct: 180 YLDMFSQRGPKMGLFTYTTLLIQLNKLNMTSTVMDRYHQILREGLQPNLLIYNSVINALC 239

Query: 275 KGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVV 334
           K G + +A  ++  + + G+ PD FTY S++ GYC    +D+A EIF  M  +GC+    
Sbjct: 240 KDGNVRDAESIINKVFKSGMKPDTFTYTSMILGYCRNRDLDSAFEIFNRMDEEGCEPNAA 299

Query: 335 SYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEM 394
           +Y+ LING C    V EA+    ++  +GV  TV T+   +  L   G+   A K+F +M
Sbjct: 300 TYSTLINGLCNSGRVNEALDFISEMTRHGVLPTVHTFTAPIVALCDMGRIEDAWKIFIDM 359

Query: 395 KLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLE--------------MNKFEFGIEI 440
           K    +P++ TY  LI G       + A+ LFH +               MN     +EI
Sbjct: 360 KKKGCKPNVYTYTSLISG---QRVSRMAIGLFHRMSRDGVVPNTVTYNALMNVLMENMEI 416

Query: 441 ---------------------FNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIM 479
                                +N LI G C  G  + A  +   + +    PT+VTY+I+
Sbjct: 417 DSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTEKAMSMLTNMLKGRPTPTLVTYNII 476

Query: 480 IHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPER 539
           I G C  G  + A   L  M+ NGC P+  ++  L+ GF + +K      + ++M   +R
Sbjct: 477 IKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELISGFCKISKMELASGMFNEMM--DR 534

Query: 540 NLVPDDTTFSIVVDLLAKDEKYHECSA 566
            L P++ T++ ++    KDEK  +C+A
Sbjct: 535 GLCPNEVTYTALISGYCKDEKL-DCAA 560



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 125/488 (25%), Positives = 227/488 (46%), Gaps = 37/488 (7%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
           NE +   C  G  +  +A      M   +P+P + ++N++      +   D  I     +
Sbjct: 439 NELIRGYCTIG--DTEKAMSMLTNMLKGRPTPTLVTYNIIIKGYCDSGDTDVAIRVLELM 496

Query: 102 VSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLING 161
            + G  PD  +   LI+       G C  ++++ A+ +F  M+  G+ P+ +TY  LI+G
Sbjct: 497 KANGCQPDEWSYTELIS-------GFCKISKMELASGMFNEMMDRGLCPNEVTYTALISG 549

Query: 162 FCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKG 221
           +C+   L  A R+ ++M           + N+ +Y+++I  L K+     A+EL   M  
Sbjct: 550 YCKDEKLDCAARMLERMKRSG------CRPNVQTYNVLIHGLTKQNNFSGAEELCKVMLE 603

Query: 222 RGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINE 281
             I+P VV  +T+I+G C  G       +F +M+  G  PNL T++ +I  L + G++ E
Sbjct: 604 EKISPDVVTYSTVINGLCNNGAIPLALEMFNKMVKHGCLPNLHTYSSLIQALGQEGRVEE 663

Query: 282 ANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILIN 341
           A  +   + ++GL PD  TY  +++   + G++D A +    M + GC+ T+ +Y++LI 
Sbjct: 664 AEEMFSELKKQGLIPDEVTYVKMIEVCVMSGKVDRAFDFLGEMINAGCQPTLQTYDVLIK 723

Query: 342 G------YCKILNVEEAMSLYR---QIISNGVRQTVIT-------------YNTLLSGLF 379
           G      Y K++ +  A S      QII+  V   + +             Y+ LLS L 
Sbjct: 724 GLQNEMVYHKLVALPNAASTSTFDDQIINKDVISVLSSKLAELDFELSRQLYDALLSRLS 783

Query: 380 QAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIE 439
           ++G+   A  L+  M   +  P+  TY   +  L +   V  A+ +F  +   + E  + 
Sbjct: 784 RSGRWFEANNLYRSMVSQSQCPNQDTYKHFLISLLRALKVDLAMDVFKHMSDQRCELHLT 843

Query: 440 IFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYM 499
            +  LI  LC+  R   A  +F K+  + L    + ++I+I+GL   G  +   +FL  M
Sbjct: 844 GYKELICTLCQLHRRKEARFVFEKMLSRALNADEIVWTILINGLLGAGYKDLCMEFLHIM 903

Query: 500 EKNGCAPN 507
           E N   P+
Sbjct: 904 ETNRRNPS 911



 Score =  119 bits (298), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 71/253 (28%), Positives = 127/253 (50%), Gaps = 3/253 (1%)

Query: 269 MIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKG 328
           MI       ++ +A   L++  QRG     FTY +L+     +    T  + +  +  +G
Sbjct: 164 MIKSCSNKAEMTQALNYLDMFSQRGPKMGLFTYTTLLIQLNKLNMTSTVMDRYHQILREG 223

Query: 329 CKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQ 388
            +  ++ YN +IN  CK  NV +A S+  ++  +G++    TY +++ G  +      A 
Sbjct: 224 LQPNLLIYNSVINALCKDGNVRDAESIINKVFKSGMKPDTFTYTSMILGYCRNRDLDSAF 283

Query: 389 KLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGL 448
           ++F+ M     EP+ +TY+ LI+GLC +  V EA+     +  +     +  F   I  L
Sbjct: 284 EIFNRMDEEGCEPNAATYSTLINGLCNSGRVNEALDFISEMTRHGVLPTVHTFTAPIVAL 343

Query: 449 CKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNV 508
           C  GR+++AW++F  + +KG  P V TY+ +I G  R  ++  A      M ++G  PN 
Sbjct: 344 CDMGRIEDAWKIFIDMKKKGCKPNVYTYTSLISGQ-RVSRM--AIGLFHRMSRDGVVPNT 400

Query: 509 VTFNTLMHGFLQN 521
           VT+N LM+  ++N
Sbjct: 401 VTYNALMNVLMEN 413



 Score = 92.4 bits (228), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 92/430 (21%), Positives = 164/430 (38%), Gaps = 73/430 (16%)

Query: 40  QLNEFLHENCKSGIINLNEARYFFGYMTHMQPS---PPISSFNLLFGAVAKNRHYDAVIS 96
           Q +E+ +    SG   +++     G    M      P   ++  L     K+   D    
Sbjct: 502 QPDEWSYTELISGFCKISKMELASGMFNEMMDRGLCPNEVTYTALISGYCKDEKLDCAAR 561

Query: 97  FYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYG 156
              ++   G  P+  T N+LI+       GL  +N    A  L K M+   + PDV+TY 
Sbjct: 562 MLERMKRSGCRPNVQTYNVLIH-------GLTKQNNFSGAEELCKVMLEEKISPDVVTYS 614

Query: 157 TLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLV------- 209
           T+ING C  G + +AL +  KMV    ++G +   N+ +YS +I +L +EG V       
Sbjct: 615 TVINGLCNNGAIPLALEMFNKMV----KHGCLP--NLHTYSSLIQALGQEGRVEEAEEMF 668

Query: 210 ----------------------------DKAKELFLEMKGRGINPAVVVCTTLIHGFCCA 241
                                       D+A +   EM   G  P +     LI G    
Sbjct: 669 SELKKQGLIPDEVTYVKMIEVCVMSGKVDRAFDFLGEMINAGCQPTLQTYDVLIKGLQNE 728

Query: 242 G----------------------NWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKI 279
                                  N + ++ L  ++ +L    +   ++ ++  L + G+ 
Sbjct: 729 MVYHKLVALPNAASTSTFDDQIINKDVISVLSSKLAELDFELSRQLYDALLSRLSRSGRW 788

Query: 280 NEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNIL 339
            EAN L   M+ +   P++ TY   +       ++D A ++F  M  + C+  +  Y  L
Sbjct: 789 FEANNLYRSMVSQSQCPNQDTYKHFLISLLRALKVDLAMDVFKHMSDQRCELHLTGYKEL 848

Query: 340 INGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNV 399
           I   C++   +EA  ++ +++S  +    I +  L++GL  AG      +    M+    
Sbjct: 849 ICTLCQLHRRKEARFVFEKMLSRALNADEIVWTILINGLLGAGYKDLCMEFLHIMETNRR 908

Query: 400 EPDLSTYNIL 409
            P      IL
Sbjct: 909 NPSSHARTIL 918


>gi|242096872|ref|XP_002438926.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
 gi|241917149|gb|EER90293.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
          Length = 924

 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 155/575 (26%), Positives = 261/575 (45%), Gaps = 29/575 (5%)

Query: 8   RCLFSSETVSKVKLSSLFKSPRQIAAVSSPETQLNEFLHENCKSGIINLNEARYFFGYMT 67
           RC  S     K+ L   + S  ++A  +             C +G+    +A      M 
Sbjct: 90  RCNSSPRLHPKLLLDFFYWSRTRLAPSAPAPDAFAHLAVSLCAAGL--YPQANGLLDQMI 147

Query: 68  HMQPSPPI--SSFNLLFGAVAKNRH---YDAVISFYRKLVSIGLLPDFLTLNILINCFGN 122
              P+PP+  SS +       + R     D ++  Y+K    G + D   + +L+   G 
Sbjct: 148 RAYPTPPLVLSSVHRALSGSDQGRRPVVLDVLVDTYKK---TGRVRDGAEVVLLMKDLGL 204

Query: 123 KERGLCVENRIKEAT--------WLFKN-MIAFGVRPDVITYGTLINGFCRTGNLSVALR 173
                C    +K+          W  +  M   G+ PDV TY TLI  +C+  +L  A  
Sbjct: 205 APSLRCCNGLLKDLLRADALDLLWKVRGFMEGAGISPDVYTYSTLIEAYCKVRDLESA-- 262

Query: 174 LHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTT 233
             KK+V    E G     N+ +Y+ +I  LC+ G +++A     EM+  G+ P       
Sbjct: 263 --KKVVEEMRETG--CSLNVVTYNTLIGGLCRAGAIEEAFGYKKEMEDYGLVPDGFTYGA 318

Query: 234 LIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRG 293
           +I+G C  G  ++   L  EM   G  PN++ ++ +ID   + G  +EA  +++ M   G
Sbjct: 319 IINGLCKRGRPDQAKCLLDEMSCAGLMPNVVVYSTLIDGFMRQGNADEAFKIVKEMSAAG 378

Query: 294 LNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAM 353
           + P++ TY++L+ G C +GR+  A  I   M   G     ++YN++I G+ +  N EEA 
Sbjct: 379 VQPNKITYDNLIRGLCKLGRMGRASRILKQMTKIGYMADTMTYNLVIEGHLRQHNKEEAF 438

Query: 354 SLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGL 413
            L  ++   G+   V TY+ +++GL Q G++  A  L ++M    ++P+   Y  LI G 
Sbjct: 439 LLLNEMRKGGISPNVYTYSIIINGLCQIGESERASGLLEQMIADGLKPNAFVYAPLISGY 498

Query: 414 CKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTV 473
           C+      A +    +        +  +N LI GL   G++D A E + ++ +KG  P  
Sbjct: 499 CREGSFSLACETLKKMTRENLTPDLYCYNSLIIGLSNVGKMDEAIEYYDEMLEKGFQPND 558

Query: 474 VTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHK 533
            TY  +IHG    G LEKA   L  M  +G  PN   +  ++ G+ +++   KV   L  
Sbjct: 559 FTYGGLIHGYSMAGNLEKAEQLLHQMLNSGLNPNDFIYAQILEGYFKSDNLEKVSSTLKS 618

Query: 534 MAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVS 568
           M   E+ L+PD+  + IV+  L+     H  +AVS
Sbjct: 619 ML--EKGLMPDNRLYGIVIHNLSSSG--HMQAAVS 649



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 167/640 (26%), Positives = 268/640 (41%), Gaps = 121/640 (18%)

Query: 32  AAVSSPETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHY 91
           A +S      +  +   CK  + +L  A+     M     S  + ++N L G + +    
Sbjct: 237 AGISPDVYTYSTLIEAYCK--VRDLESAKKVVEEMRETGCSLNVVTYNTLIGGLCRAGAI 294

Query: 92  DAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPD 151
           +    + +++   GL+PD  T   +IN       GLC   R  +A  L   M   G+ P+
Sbjct: 295 EEAFGYKKEMEDYGLVPDGFTYGAIIN-------GLCKRGRPDQAKCLLDEMSCAGLMPN 347

Query: 152 VITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDK 211
           V+ Y TLI+GF R GN   A ++ K+M +   +       N  +Y  +I  LCK G + +
Sbjct: 348 VVVYSTLIDGFMRQGNADEAFKIVKEMSAAGVQ------PNKITYDNLIRGLCKLGRMGR 401

Query: 212 A--------------------------------KELFL---EMKGRGINPAVVVCTTLIH 236
           A                                +E FL   EM+  GI+P V   + +I+
Sbjct: 402 ASRILKQMTKIGYMADTMTYNLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIIIN 461

Query: 237 GFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNP 296
           G C  G  E  +GL  +M+  G +PN   +  +I   C+ G  + A   L+ M +  L P
Sbjct: 462 GLCQIGESERASGLLEQMIADGLKPNAFVYAPLISGYCREGSFSLACETLKKMTRENLTP 521

Query: 297 DRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLY 356
           D + YNSL+ G   VG++D A E +  M  KG +    +Y  LI+GY    N+E+A  L 
Sbjct: 522 DLYCYNSLIIGLSNVGKMDEAIEYYDEMLEKGFQPNDFTYGGLIHGYSMAGNLEKAEQLL 581

Query: 357 RQIISNGVRQTVITYNTLLSGLFQAG---------QAGYAQKLFDEMKLYNV-------- 399
            Q++++G+      Y  +L G F++          ++   + L  + +LY +        
Sbjct: 582 HQMLNSGLNPNDFIYAQILEGYFKSDNLEKVSSTLKSMLEKGLMPDNRLYGIVIHNLSSS 641

Query: 400 ------------------EPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIF 441
                              PD   Y  LI G CK   +++AV L   +     E GI  +
Sbjct: 642 GHMQAAVSVLSVIEKNGLVPDSLIYGSLISGFCKAADMEKAVGLLDEMAKKGIEPGISCY 701

Query: 442 NCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEK 501
           N LIDG CK+  + +A  +F+ +  KGL P  VTY+ +I G C+ G +  A D    M  
Sbjct: 702 NALIDGFCKSDDISHARNIFNSIICKGLPPNCVTYTTLIDGYCKAGDIRDAIDLYNEMLT 761

Query: 502 NGCAPN----------------------------------VVTFNTLMHGFLQNNKTSKV 527
            G AP+                                  + +FNTL+HGF +  K  + 
Sbjct: 762 EGVAPDAFVYSVLAAGCSNSGDLQQALFITEEMIARGYAIISSFNTLVHGFCKRGKLQET 821

Query: 528 VELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAV 567
           V+ LH M   ++++VP   T   +V  L +  K  E   +
Sbjct: 822 VKFLHVMM--DKDIVPSLLTVENIVIGLGEAGKLSEAHTI 859



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 140/540 (25%), Positives = 250/540 (46%), Gaps = 45/540 (8%)

Query: 31  IAAVSSPETQLNEFLHENCKSGIINLNE---ARYFFGYMTHMQPSPPISSFNLLFGAVAK 87
           +  +S+   Q N+  ++N   G+  L     A      MT +       ++NL+     +
Sbjct: 371 VKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQMTKIGYMADTMTYNLVIEGHLR 430

Query: 88  NRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFG 147
             + +       ++   G+ P+  T +I+IN       GLC     + A+ L + MIA G
Sbjct: 431 QHNKEEAFLLLNEMRKGGISPNVYTYSIIIN-------GLCQIGESERASGLLEQMIADG 483

Query: 148 VRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGD-------YENGLISKTNI------- 193
           ++P+   Y  LI+G+CR G+ S+A    KKM   +       Y + +I  +N+       
Sbjct: 484 LKPNAFVYAPLISGYCREGSFSLACETLKKMTRENLTPDLYCYNSLIIGLSNVGKMDEAI 543

Query: 194 ---------------FSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGF 238
                          F+Y  +I      G ++KA++L  +M   G+NP   +   ++ G+
Sbjct: 544 EYYDEMLEKGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQMLNSGLNPNDFIYAQILEGY 603

Query: 239 CCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDR 298
             + N E+V+     ML+ G  P+   + ++I  L   G +  A  +L ++ + GL PD 
Sbjct: 604 FKSDNLEKVSSTLKSMLEKGLMPDNRLYGIVIHNLSSSGHMQAAVSVLSVIEKNGLVPDS 663

Query: 299 FTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQ 358
             Y SL+ G+C    ++ A  +   M  KG +  +  YN LI+G+CK  ++  A +++  
Sbjct: 664 LIYGSLISGFCKAADMEKAVGLLDEMAKKGIEPGISCYNALIDGFCKSDDISHARNIFNS 723

Query: 359 IISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNC 418
           II  G+    +TY TL+ G  +AG    A  L++EM    V PD   Y++L  G   +  
Sbjct: 724 IICKGLPPNCVTYTTLIDGYCKAGDIRDAIDLYNEMLTEGVAPDAFVYSVLAAGCSNSGD 783

Query: 419 VQEAVKLFHMLEMNKFEFGI-EIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYS 477
           +Q+A  LF   EM    + I   FN L+ G CK G+L    +  H +  K +VP+++T  
Sbjct: 784 LQQA--LFITEEMIARGYAIISSFNTLVHGFCKRGKLQETVKFLHVMMDKDIVPSLLTVE 841

Query: 478 IMIHGLCRKGKLEKAND-FLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAE 536
            ++ GL   GKL +A+  F+   +KN    +    ++L    +  N+    ++++H M +
Sbjct: 842 NIVIGLGEAGKLSEAHTIFVELQQKNASHRDTDHLSSLFTDMI--NQGLVPLDVIHNMIQ 899


>gi|356561705|ref|XP_003549120.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
           mitochondrial-like [Glycine max]
          Length = 445

 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 132/395 (33%), Positives = 199/395 (50%), Gaps = 37/395 (9%)

Query: 63  FGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGN 122
           F  M  M+P PP   FN +  ++ KN+ Y  VIS +++    G+ PD  TL+ILINCF +
Sbjct: 46  FNLMLLMRPPPPTFLFNNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSILINCFCH 105

Query: 123 KE----------------------------RGLCVENRIKEATWLFKNMIAFGVRPDVIT 154
           +                             +GLC    IK+  +    ++A G + D ++
Sbjct: 106 QAHITLAFSVFANILKRGFHPDAITLNTLIKGLCFRGEIKKTLYFHDQVVAQGFQLDQVS 165

Query: 155 YGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKE 214
           YGTLING C+ G      RL +K+       G   K ++  Y+ II+SLCK  L+  A +
Sbjct: 166 YGTLINGLCKAGETKAVARLLRKL------EGHSVKPDVVMYNTIINSLCKNKLLGDACD 219

Query: 215 LFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLC 274
           ++ EM  +GI+P VV  TTLIHGFC  G  +E   L  EM      P++ TF+V+ID L 
Sbjct: 220 VYSEMIVKGISPDVVTYTTLIHGFCIMGKMKEAFSLLNEMKLKNINPDVYTFSVLIDALG 279

Query: 275 KGGK---INEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKH 331
           K GK   ++EA  L E M  + + PD  TYNSL+DG C    ++ A  +   M   G + 
Sbjct: 280 KEGKKKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALLKEMKEHGIQP 339

Query: 332 TVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLF 391
            V SY IL++G CK   +E A   ++ ++  G    V  YN +++GL +AG  G A  L 
Sbjct: 340 DVYSYTILLDGLCKGGRLEIAKEFFQHLLVKGCHLNVWPYNVMINGLCKAGLFGEAMDLK 399

Query: 392 DEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLF 426
            +M+     P+  T+  +I  L + +   +A K+ 
Sbjct: 400 SKMEGKGCMPNAITFRTIICALSEKDENDKAEKIL 434



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 134/470 (28%), Positives = 220/470 (46%), Gaps = 55/470 (11%)

Query: 71  PSPPIS--SFNLLFGAVAK-NRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGL 127
           P PPI+  +  L + + ++ + H+ AV SF   L+     P FL  NIL +   NK    
Sbjct: 17  PYPPIAIPTATLHYQSHSQPHYHHHAVASFNLMLLMRPPPPTFLFNNILSSLVKNK---- 72

Query: 128 CVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGL 187
               R      LFK     G+ PD+ T                                 
Sbjct: 73  ----RYPTVISLFKQFEPNGITPDLCTL-------------------------------- 96

Query: 188 ISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEV 247
                    SI+I+  C +  +  A  +F  +  RG +P  +   TLI G C  G  ++ 
Sbjct: 97  ---------SILINCFCHQAHITLAFSVFANILKRGFHPDAITLNTLIKGLCFRGEIKKT 147

Query: 248 NGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDG 307
                +++  G + + +++  +I+ LCK G+      LL  +    + PD   YN++++ 
Sbjct: 148 LYFHDQVVAQGFQLDQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDVVMYNTIINS 207

Query: 308 YCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQT 367
            C    +  A +++  M  KG    VV+Y  LI+G+C +  ++EA SL  ++    +   
Sbjct: 208 LCKNKLLGDACDVYSEMIVKGISPDVVTYTTLIHGFCIMGKMKEAFSLLNEMKLKNINPD 267

Query: 368 VITYNTLLSGLFQAGQAGY---AQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVK 424
           V T++ L+  L + G+      A  LF+EMK  N+ PD+ TYN LIDGLCKN+ ++ A+ 
Sbjct: 268 VYTFSVLIDALGKEGKKKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIA 327

Query: 425 LFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLC 484
           L   ++ +  +  +  +  L+DGLCK GRL+ A E F  L  KG    V  Y++MI+GLC
Sbjct: 328 LLKEMKEHGIQPDVYSYTILLDGLCKGGRLEIAKEFFQHLLVKGCHLNVWPYNVMINGLC 387

Query: 485 RKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKM 534
           + G   +A D    ME  GC PN +TF T++    + ++  K  ++L +M
Sbjct: 388 KAGLFGEAMDLKSKMEGKGCMPNAITFRTIICALSEKDENDKAEKILREM 437



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 114/370 (30%), Positives = 188/370 (50%), Gaps = 6/370 (1%)

Query: 194 FSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIE 253
           F ++ I+ SL K         LF + +  GI P +   + LI+ FC   +      +F  
Sbjct: 59  FLFNNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSILINCFCHQAHITLAFSVFAN 118

Query: 254 MLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGR 313
           +L  G  P+ +T N +I  LC  G+I +     + ++ +G   D+ +Y +L++G C  G 
Sbjct: 119 ILKRGFHPDAITLNTLIKGLCFRGEIKKTLYFHDQVVAQGFQLDQVSYGTLINGLCKAGE 178

Query: 314 IDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNT 373
                 +   +     K  VV YN +IN  CK   + +A  +Y ++I  G+   V+TY T
Sbjct: 179 TKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVTYTT 238

Query: 374 LLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGL---CKNNCVQEAVKLFHMLE 430
           L+ G    G+   A  L +EMKL N+ PD+ T+++LID L    K   V EA+ LF  ++
Sbjct: 239 LIHGFCIMGKMKEAFSLLNEMKLKNINPDVYTFSVLIDALGKEGKKKMVDEAMSLFEEMK 298

Query: 431 MNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLE 490
                  I  +N LIDGLCK   L+ A  L  ++ + G+ P V +Y+I++ GLC+ G+LE
Sbjct: 299 HKNMIPDIVTYNSLIDGLCKNHHLERAIALLKEMKEHGIQPDVYSYTILLDGLCKGGRLE 358

Query: 491 KANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTF-S 549
            A +F  ++   GC  NV  +N +++G  +     + ++L  KM    +  +P+  TF +
Sbjct: 359 IAKEFFQHLLVKGCHLNVWPYNVMINGLCKAGLFGEAMDLKSKME--GKGCMPNAITFRT 416

Query: 550 IVVDLLAKDE 559
           I+  L  KDE
Sbjct: 417 IICALSEKDE 426



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 80/307 (26%), Positives = 161/307 (52%), Gaps = 5/307 (1%)

Query: 254 MLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGR 313
           ML + P P    FN ++  L K  +      L +     G+ PD  T + L++ +C    
Sbjct: 49  MLLMRPPPPTFLFNNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSILINCFCHQAH 108

Query: 314 IDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNT 373
           I  A  +F ++  +G     ++ N LI G C    +++ +  + Q+++ G +   ++Y T
Sbjct: 109 ITLAFSVFANILKRGFHPDAITLNTLIKGLCFRGEIKKTLYFHDQVVAQGFQLDQVSYGT 168

Query: 374 LLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNK 433
           L++GL +AG+     +L  +++ ++V+PD+  YN +I+ LCKN  + +A  ++  + +  
Sbjct: 169 LINGLCKAGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKG 228

Query: 434 FEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGK---LE 490
               +  +  LI G C  G++  A+ L +++  K + P V T+S++I  L ++GK   ++
Sbjct: 229 ISPDVVTYTTLIHGFCIMGKMKEAFSLLNEMKLKNINPDVYTFSVLIDALGKEGKKKMVD 288

Query: 491 KANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSI 550
           +A      M+     P++VT+N+L+ G  +N+   + + LL +M   E  + PD  +++I
Sbjct: 289 EAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALLKEMK--EHGIQPDVYSYTI 346

Query: 551 VVDLLAK 557
           ++D L K
Sbjct: 347 LLDGLCK 353



 Score =  141 bits (356), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 84/291 (28%), Positives = 149/291 (51%), Gaps = 16/291 (5%)

Query: 77  SFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEA 136
           S+  L   + K     AV    RKL    + PD +  N +IN        LC    + +A
Sbjct: 165 SYGTLINGLCKAGETKAVARLLRKLEGHSVKPDVVMYNTIIN-------SLCKNKLLGDA 217

Query: 137 TWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSY 196
             ++  MI  G+ PDV+TY TLI+GFC  G +  A  L  +M   +         +++++
Sbjct: 218 CDVYSEMIVKGISPDVVTYTTLIHGFCIMGKMKEAFSLLNEMKLKNIN------PDVYTF 271

Query: 197 SIIIDSLCKEG---LVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIE 253
           S++ID+L KEG   +VD+A  LF EMK + + P +V   +LI G C   + E    L  E
Sbjct: 272 SVLIDALGKEGKKKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALLKE 331

Query: 254 MLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGR 313
           M + G +P++ ++ +++D LCKGG++  A    + ++ +G + + + YN +++G C  G 
Sbjct: 332 MKEHGIQPDVYSYTILLDGLCKGGRLEIAKEFFQHLLVKGCHLNVWPYNVMINGLCKAGL 391

Query: 314 IDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGV 364
              A ++   M  KGC    +++  +I    +    ++A  + R++I+ G+
Sbjct: 392 FGEAMDLKSKMEGKGCMPNAITFRTIICALSEKDENDKAEKILREMIARGL 442



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 80/292 (27%), Positives = 139/292 (47%), Gaps = 1/292 (0%)

Query: 280 NEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNIL 339
           + A     LM+     P  F +N+++       R  T   +F      G    + + +IL
Sbjct: 40  HHAVASFNLMLLMRPPPPTFLFNNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSIL 99

Query: 340 INGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNV 399
           IN +C   ++  A S++  I+  G     IT NTL+ GL   G+        D++     
Sbjct: 100 INCFCHQAHITLAFSVFANILKRGFHPDAITLNTLIKGLCFRGEIKKTLYFHDQVVAQGF 159

Query: 400 EPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWE 459
           + D  +Y  LI+GLCK    +   +L   LE +  +  + ++N +I+ LCK   L +A +
Sbjct: 160 QLDQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACD 219

Query: 460 LFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFL 519
           ++ ++  KG+ P VVTY+ +IHG C  GK+++A   L  M+     P+V TF+ L+    
Sbjct: 220 VYSEMIVKGISPDVVTYTTLIHGFCIMGKMKEAFSLLNEMKLKNINPDVYTFSVLIDALG 279

Query: 520 QNNKTSKVVELLHKMAE-PERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKS 570
           +  K   V E +    E   +N++PD  T++ ++D L K+       A+ K 
Sbjct: 280 KEGKKKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALLKE 331



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 48/169 (28%), Positives = 81/169 (47%), Gaps = 13/169 (7%)

Query: 56  LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNI 115
           ++EA   F  M H    P I ++N L   + KN H +  I+  +++   G+ PD  +  I
Sbjct: 287 VDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALLKEMKEHGIQPDVYSYTI 346

Query: 116 LINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLH 175
           L++       GLC   R++ A   F++++  G   +V  Y  +ING C+ G    A+ L 
Sbjct: 347 LLD-------GLCKGGRLEIAKEFFQHLLVKGCHLNVWPYNVMINGLCKAGLFGEAMDLK 399

Query: 176 KKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGI 224
            KM       G     N  ++  II +L ++   DKA+++  EM  RG+
Sbjct: 400 SKM------EGKGCMPNAITFRTIICALSEKDENDKAEKILREMIARGL 442


>gi|147866209|emb|CAN83683.1| hypothetical protein VITISV_017537 [Vitis vinifera]
          Length = 833

 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 145/477 (30%), Positives = 235/477 (49%), Gaps = 16/477 (3%)

Query: 77  SFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEA 136
            +  +  A+ KN    A   F  K++ +G   D      L+    N     C  + + EA
Sbjct: 130 DYRTVVNALCKNGFVQAAEMFCCKVLRLGFGLDTHVCTSLV--LAN-----CRRDDLGEA 182

Query: 137 TWLFKNMIAF-GVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFS 195
             +F+ M      RP+ +TY  LI+G C  G L  A +L ++MV    E G    T   +
Sbjct: 183 FRVFEKMSKEESCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMV----EKGCQPSTR--T 236

Query: 196 YSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEML 255
           Y+++I + C  G+ DKA ++  EM  +   P V   T LI   C  G  EE NG+F +ML
Sbjct: 237 YTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKML 296

Query: 256 DLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRID 315
             G  P ++TFN +I+  CK G +  A  LL +M +    P+  TYN LM+G C V +  
Sbjct: 297 KHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSY 356

Query: 316 TAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLL 375
            A  +   +   G     V+YNIL++G+CK   +  A +++  + S G+     T+  L+
Sbjct: 357 KAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALI 416

Query: 376 SGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFE 435
            GL + G+   A  +   M    +  D  T+  LIDG CK    ++   LF  +  N+  
Sbjct: 417 DGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCL 476

Query: 436 FGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDF 495
                FNC +D L K  +L+ A  +  K+ + GLVP+VVT++I+I G CR G+   +   
Sbjct: 477 TTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKM 536

Query: 496 LLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVV 552
           L  M++ GC+PNV T+  +++G   N +  +   +L  M+     + P+  T++++V
Sbjct: 537 LERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMS--SFGVSPNHFTYAVLV 591



 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 138/515 (26%), Positives = 239/515 (46%), Gaps = 61/515 (11%)

Query: 49  CKSGIINLNEA------RYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLV 102
           CK+G +   E       R  FG  TH+  S       L+     ++   +A   F +   
Sbjct: 139 CKNGFVQAAEMFCCKVLRLGFGLDTHVCTS-------LVLANCRRDDLGEAFRVFEKMSK 191

Query: 103 SIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGF 162
                P+ +T +ILI+       GLC   R++EA  L + M+  G +P   TY  LI   
Sbjct: 192 EESCRPNSVTYSILIH-------GLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAK 244

Query: 163 CRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGR 222
           C  G    A+++  +M +           N+ +Y+I+ID LC+EG +++A  +F +M   
Sbjct: 245 CDIGMTDKAMKMLDEMATK------ACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKH 298

Query: 223 GINPAVVVCTTLIHGFC-------------------CAGNWEEVNGL------------- 250
           G+ P ++    LI+G+C                   C  N    N L             
Sbjct: 299 GLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKA 358

Query: 251 ---FIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDG 307
                 ++D G  P+ +T+N+++D  CK G++N A  +   M   GL PD FT+ +L+DG
Sbjct: 359 FLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDG 418

Query: 308 YCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQT 367
            C +GR++ A  I  SM  KG     V++  LI+G+CKI   ++   L+  ++ N    T
Sbjct: 419 LCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTT 478

Query: 368 VITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFH 427
             T+N  L  L +  +   A  +  +M  Y + P + T+ ILI+G C+      ++K+  
Sbjct: 479 AHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLE 538

Query: 428 MLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKG 487
            ++       +  +  +I+GLC  GR++ A  +   +   G+ P   TY++++    + G
Sbjct: 539 RMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAG 598

Query: 488 KLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNN 522
           +L++A   +  M KNGC PN   ++ L+ GF+ +N
Sbjct: 599 RLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSN 633



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 132/439 (30%), Positives = 223/439 (50%), Gaps = 9/439 (2%)

Query: 130 ENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLIS 189
           EN + +       M   G R     Y TL+    +     VA  ++++MV+  +  G I 
Sbjct: 71  ENGVVKLMGALDGMTELGFRLSYPCYSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGID 130

Query: 190 KTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNG 249
                 Y  ++++LCK G V  A+    ++   G      VCT+L+   C   +  E   
Sbjct: 131 ------YRTVVNALCKNGFVQAAEMFCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFR 184

Query: 250 LFIEM-LDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGY 308
           +F +M  +   RPN +T++++I  LC+ G++ EA  L + M+++G  P   TY  L+   
Sbjct: 185 VFEKMSKEESCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAK 244

Query: 309 CLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTV 368
           C +G  D A ++   M +K C   V +Y ILI+  C+   +EEA  ++R+++ +G+   +
Sbjct: 245 CDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGI 304

Query: 369 ITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHM 428
           IT+N L++G  + G    A +L   M+  N +P++ TYN L++GLC+ +   +A  L   
Sbjct: 305 ITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRR 364

Query: 429 LEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGK 488
           +  N        +N L+DG CK G+L+ A+ +F+ +   GL P   T++ +I GLC+ G+
Sbjct: 365 VVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGR 424

Query: 489 LEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTF 548
           LE+AN  L  M K G + + VTF  L+ G  +  K   V  L   M E     +    TF
Sbjct: 425 LEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVE--NRCLTTAHTF 482

Query: 549 SIVVDLLAKDEKYHECSAV 567
           +  +D L KD K +E +A+
Sbjct: 483 NCFLDALGKDYKLNEANAM 501



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 140/572 (24%), Positives = 243/572 (42%), Gaps = 113/572 (19%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCF------------ 120
           P + ++ +L   + +    +     +RK++  GL P  +T N LIN +            
Sbjct: 267 PNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQL 326

Query: 121 ------GNKE----------RGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCR 164
                 GN +           GLC  ++  +A  L + ++  G+ PD +TY  L++GFC+
Sbjct: 327 LSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCK 386

Query: 165 TGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGI 224
            G L++A  +   M S   E       + F+++ +ID LCK G +++A  +   M  +GI
Sbjct: 387 EGQLNMAFNIFNSMNSAGLE------PDGFTFTALIDGLCKLGRLEQANGILGSMVKKGI 440

Query: 225 NPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANG 284
           +   V  T LI G C  G  ++V  LF  M++        TFN  +D L K  K+NEAN 
Sbjct: 441 SLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANA 500

Query: 285 LL-----------------------------------ELMIQRGLNPDRFTYNSLMDGYC 309
           +L                                   E M Q G +P+ +TY  +++G C
Sbjct: 501 MLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLC 560

Query: 310 LVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVI 369
             GR++ A  I  SM S G      +Y +L+  + K   ++ A  +   ++ NG +    
Sbjct: 561 NNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSH 620

Query: 370 TYNTLLSGLFQAGQAGYAQKL-----FDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVK 424
            Y+ LLSG   +  A  A+ L      D   L + E D             NNC+   V 
Sbjct: 621 IYSALLSGFVLSNTAIGARALSSTGDLDARSLSSEEND-------------NNCLSSHV- 666

Query: 425 LFHMLEMNKF--------EFGI---EIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTV 473
            F +++++          + G+   +++N L+ GLCK GR+  A +L   + + GL P  
Sbjct: 667 -FRLMDVDHALKIRDEIKKCGVPTEDLYNFLVVGLCKEGRIIEADQLTQDMVKHGLFPDK 725

Query: 474 VTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELL-- 531
              SI+ H  C+  K +   +F+  +  N   P+  ++  ++HG     +  +  +L+  
Sbjct: 726 AISSIIEH-YCKTCKYDNCLEFMKLVLDNKFVPSFASYCWVIHGLRNEGRVQEAQKLVSD 784

Query: 532 ---HKMAEPERNLVPDDTTFSIVVDLLAKDEK 560
              H   E E  + P        ++ L K+E+
Sbjct: 785 LVRHTGIEEEVEVTPS-------IEFLMKEEE 809


>gi|255538538|ref|XP_002510334.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223551035|gb|EEF52521.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 947

 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 153/536 (28%), Positives = 256/536 (47%), Gaps = 52/536 (9%)

Query: 36  SPETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVI 95
           SP T  +  L   C+ G+I    A + F  M  +   P + S N L  ++ +       I
Sbjct: 147 SP-TVFDMILKIYCEKGMIK--NALHVFDNMGKLGCVPSLRSCNRLLSSLVRKGESSNAI 203

Query: 96  SFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITY 155
             Y  +  +G++PD  T +I++N +       C +  +  A    K M   G   +V+TY
Sbjct: 204 LVYDHINRLGIVPDVFTCSIMVNAY-------CKDGWVNVAVDFVKEMDYLGFELNVVTY 256

Query: 156 GTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKEL 215
            +LI+G    G++  A  + K M     E G++   N  + +++I   C++  +++A+++
Sbjct: 257 NSLIDGCVSIGDMERAEMVLKLMG----ERGILR--NKVTLTLLIKGYCRQCKLEEAEKV 310

Query: 216 FLEM-KGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLC 274
             EM +  G+         LI G+C     ++   L  EML++G R NL   N +I+  C
Sbjct: 311 LREMERSEGMVLDEYAYGVLIDGYCRVCKMDDAVRLRDEMLNVGLRMNLFICNALINGYC 370

Query: 275 KGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVV 334
           K G+++EA  LL  M+   L P+ ++Y++LMDG+C  G +  A  ++  M   G +  VV
Sbjct: 371 KNGQVSEAERLLMRMVDWDLEPESYSYSTLMDGFCREGLVTKAISVYNEMLRVGIQSNVV 430

Query: 335 SYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQ----------- 383
           ++N L+ G C++   E+A+ ++  ++  GV    ++Y TLL  LF+ G+           
Sbjct: 431 THNSLLKGLCRVGAFEDALHVWHLMLKRGVTPDEVSYCTLLDLLFKMGEFFRALALWNDI 490

Query: 384 --AGY----------------------AQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCV 419
              GY                      A++ F+ MK    EPD  TY  LIDG CK   V
Sbjct: 491 LARGYGRSTYAFNTMINGFCKMEKMIEAEETFNRMKELGFEPDGVTYRTLIDGYCKLGNV 550

Query: 420 QEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIM 479
           +EA K+   +E       IE++N LI GL K+ +     +L  ++  KGL P VVTY  +
Sbjct: 551 EEAFKVKEKMEKEAILPSIELYNSLIGGLFKSKKTREVMDLLSEMCLKGLSPNVVTYGTL 610

Query: 480 IHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMA 535
           I G C +G+L+KA      M + G APNV+  + ++    +  +  +   LL KM 
Sbjct: 611 IAGWCDEGRLDKAFTAYFDMIEKGFAPNVIICSKIVSSLYRLGRIDEANMLLQKMV 666



 Score =  205 bits (521), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 147/530 (27%), Positives = 248/530 (46%), Gaps = 50/530 (9%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
           N  ++  CK+G   ++EA      M      P   S++ L     +       IS Y ++
Sbjct: 363 NALINGYCKNG--QVSEAERLLMRMVDWDLEPESYSYSTLMDGFCREGLVTKAISVYNEM 420

Query: 102 VSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLING 161
           + +G+  + +T N L+       +GLC     ++A  ++  M+  GV PD ++Y TL++ 
Sbjct: 421 LRVGIQSNVVTHNSLL-------KGLCRVGAFEDALHVWHLMLKRGVTPDEVSYCTLLDL 473

Query: 162 FCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKG 221
             + G    AL L   +++  Y        + ++++ +I+  CK   + +A+E F  MK 
Sbjct: 474 LFKMGEFFRALALWNDILARGY------GRSTYAFNTMINGFCKMEKMIEAEETFNRMKE 527

Query: 222 RGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINE 281
            G  P  V   TLI G+C  GN EE   +  +M      P++  +N +I  L K  K  E
Sbjct: 528 LGFEPDGVTYRTLIDGYCKLGNVEEAFKVKEKMEKEAILPSIELYNSLIGGLFKSKKTRE 587

Query: 282 ANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILIN 341
              LL  M  +GL+P+  TY +L+ G+C  GR+D A   +  M  KG    V+  + +++
Sbjct: 588 VMDLLSEMCLKGLSPNVVTYGTLIAGWCDEGRLDKAFTAYFDMIEKGFAPNVIICSKIVS 647

Query: 342 GYCKILNVEEAMSLYRQII-----------------------SNGVRQTV---------- 368
              ++  ++EA  L ++++                       S  +  T+          
Sbjct: 648 SLYRLGRIDEANMLLQKMVNLDVFLDHGYFDRLHKADDGNLDSQKIADTLDESSKSFSLP 707

Query: 369 --ITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLF 426
             + YN  ++GL ++G+   A+K+F  + L    PD  TY  LI G      V +A  L 
Sbjct: 708 NSVVYNIAIAGLCKSGKVDDAKKIFSSLLLRGFSPDNFTYCTLIHGYSAAGNVNDAFSLR 767

Query: 427 HMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRK 486
             +        I  +N LI+GLCK+G LD A +LF KL  KGL P V++Y+I+I G C+ 
Sbjct: 768 DEMLKRGLAPNIITYNALINGLCKSGNLDRAQKLFDKLHLKGLAPNVISYNILIDGYCKN 827

Query: 487 GKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAE 536
           G   +A D    M K G +P+++T++ L++GF +     K   LL +M E
Sbjct: 828 GNTREALDLRNKMLKEGISPSLITYSALIYGFCKQGDMGKATNLLDEMRE 877



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 144/500 (28%), Positives = 243/500 (48%), Gaps = 29/500 (5%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
           N  L   C+ G     +A + +  M     +P   S+  L   + K   +   ++ +  +
Sbjct: 433 NSLLKGLCRVGA--FEDALHVWHLMLKRGVTPDEVSYCTLLDLLFKMGEFFRALALWNDI 490

Query: 102 VSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLING 161
           ++ G        N +IN       G C   ++ EA   F  M   G  PD +TY TLI+G
Sbjct: 491 LARGYGRSTYAFNTMIN-------GFCKMEKMIEAEETFNRMKELGFEPDGVTYRTLIDG 543

Query: 162 FCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKG 221
           +C+ GN+  A ++ +KM   + E  L S   I  Y+ +I  L K     +  +L  EM  
Sbjct: 544 YCKLGNVEEAFKVKEKM---EKEAILPS---IELYNSLIGGLFKSKKTREVMDLLSEMCL 597

Query: 222 RGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINE 281
           +G++P VV   TLI G+C  G  ++    + +M++ G  PN++  + ++  L + G+I+E
Sbjct: 598 KGLSPNVVTYGTLIAGWCDEGRLDKAFTAYFDMIEKGFAPNVIICSKIVSSLYRLGRIDE 657

Query: 282 ANGLLELMIQRGLNPDRFTYNSL-------MDGYCLVGRIDTAREIFLSMHSKGCKHTVV 334
           AN LL+ M+   +  D   ++ L       +D   +   +D + + F   +S       V
Sbjct: 658 ANMLLQKMVNLDVFLDHGYFDRLHKADDGNLDSQKIADTLDESSKSFSLPNS-------V 710

Query: 335 SYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEM 394
            YNI I G CK   V++A  ++  ++  G      TY TL+ G   AG    A  L DEM
Sbjct: 711 VYNIAIAGLCKSGKVDDAKKIFSSLLLRGFSPDNFTYCTLIHGYSAAGNVNDAFSLRDEM 770

Query: 395 KLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRL 454
               + P++ TYN LI+GLCK+  +  A KLF  L +      +  +N LIDG CK G  
Sbjct: 771 LKRGLAPNIITYNALINGLCKSGNLDRAQKLFDKLHLKGLAPNVISYNILIDGYCKNGNT 830

Query: 455 DNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTL 514
             A +L +K+ ++G+ P+++TYS +I+G C++G + KA + L  M +     N+  F  L
Sbjct: 831 REALDLRNKMLKEGISPSLITYSALIYGFCKQGDMGKATNLLDEMRELFADQNIAKFVKL 890

Query: 515 MHGFLQNNKTSKVVELLHKM 534
           + G ++  +  K+ +L + M
Sbjct: 891 VEGHVKCGEVKKIAKLHNMM 910



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 113/385 (29%), Positives = 189/385 (49%), Gaps = 19/385 (4%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CK G  N+ EA      M      P I  +N L G + K++    V+    ++   GL P
Sbjct: 545 CKLG--NVEEAFKVKEKMEKEAILPSIELYNSLIGGLFKSKKTREVMDLLSEMCLKGLSP 602

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           + +T   LI        G C E R+ +A   + +MI  G  P+VI    +++   R G +
Sbjct: 603 NVVTYGTLI-------AGWCDEGRLDKAFTAYFDMIEKGFAPNVIICSKIVSSLYRLGRI 655

Query: 169 SVALRLHKKMVSGDY--ENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINP 226
             A  L +KMV+ D   ++G   + +      +      + L + +K   L        P
Sbjct: 656 DEANMLLQKMVNLDVFLDHGYFDRLHKADDGNLDSQKIADTLDESSKSFSL--------P 707

Query: 227 AVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLL 286
             VV    I G C +G  ++   +F  +L  G  P+  T+  +I      G +N+A  L 
Sbjct: 708 NSVVYNIAIAGLCKSGKVDDAKKIFSSLLLRGFSPDNFTYCTLIHGYSAAGNVNDAFSLR 767

Query: 287 ELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKI 346
           + M++RGL P+  TYN+L++G C  G +D A+++F  +H KG    V+SYNILI+GYCK 
Sbjct: 768 DEMLKRGLAPNIITYNALINGLCKSGNLDRAQKLFDKLHLKGLAPNVISYNILIDGYCKN 827

Query: 347 LNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTY 406
            N  EA+ L  +++  G+  ++ITY+ L+ G  + G  G A  L DEM+    + +++ +
Sbjct: 828 GNTREALDLRNKMLKEGISPSLITYSALIYGFCKQGDMGKATNLLDEMRELFADQNIAKF 887

Query: 407 NILIDGLCKNNCVQEAVKLFHMLEM 431
             L++G  K   V++  KL +M+ +
Sbjct: 888 VKLVEGHVKCGEVKKIAKLHNMMHI 912



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 94/363 (25%), Positives = 162/363 (44%), Gaps = 38/363 (10%)

Query: 196 YSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEML 255
           + +I+   C++G++  A  +F  M   G  P++  C  L+      G       ++  + 
Sbjct: 151 FDMILKIYCEKGMIKNALHVFDNMGKLGCVPSLRSCNRLLSSLVRKGESSNAILVYDHIN 210

Query: 256 DLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRID 315
            LG  P++ T ++M++  CK G +N A   ++ M   G   +  TYNSL+DG   +G ++
Sbjct: 211 RLGIVPDVFTCSIMVNAYCKDGWVNVAVDFVKEMDYLGFELNVVTYNSLIDGCVSIGDME 270

Query: 316 TAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLL 375
            A  +   M  +G     V+  +LI GYC+   +EEA                       
Sbjct: 271 RAEMVLKLMGERGILRNKVTLTLLIKGYCRQCKLEEA----------------------- 307

Query: 376 SGLFQAGQAGYAQKLFDEM-KLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKF 434
                       +K+  EM +   +  D   Y +LIDG C+   + +AV+L   +     
Sbjct: 308 ------------EKVLREMERSEGMVLDEYAYGVLIDGYCRVCKMDDAVRLRDEMLNVGL 355

Query: 435 EFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKAND 494
              + I N LI+G CK G++  A  L  ++    L P   +YS ++ G CR+G + KA  
Sbjct: 356 RMNLFICNALINGYCKNGQVSEAERLLMRMVDWDLEPESYSYSTLMDGFCREGLVTKAIS 415

Query: 495 FLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDL 554
               M + G   NVVT N+L+ G  +       + + H M +  R + PD+ ++  ++DL
Sbjct: 416 VYNEMLRVGIQSNVVTHNSLLKGLCRVGAFEDALHVWHLMLK--RGVTPDEVSYCTLLDL 473

Query: 555 LAK 557
           L K
Sbjct: 474 LFK 476



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 72/330 (21%), Positives = 148/330 (44%), Gaps = 54/330 (16%)

Query: 260 RPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTARE 319
           RPN+ +   ++  L +    +E    L  ++     P +  Y+SL+    LV        
Sbjct: 91  RPNVNSHCKLVHILSRARMYDETRSYLNELV----TPSKNNYSSLVVWNELV-------R 139

Query: 320 IFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLF 379
           +F     +  K +   +++++  YC+   ++ A+ ++  +   G   ++ + N LLS L 
Sbjct: 140 VF-----EDFKFSPTVFDMILKIYCEKGMIKNALHVFDNMGKLGCVPSLRSCNRLLSSLV 194

Query: 380 QAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIE 439
           + G++  A  ++D +    + PD+ T +I+++  CK+  V  AV     ++   FE  + 
Sbjct: 195 RKGESSNAILVYDHINRLGIVPDVFTCSIMVNAYCKDGWVNVAVDFVKEMDYLGFELNVV 254

Query: 440 IFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYM 499
            +N LIDG    G ++ A  +   + ++G++   VT +++I G CR+ KLE+A   L  M
Sbjct: 255 TYNSLIDGCVSIGDMERAEMVLKLMGERGILRNKVTLTLLIKGYCRQCKLEEAEKVLREM 314

Query: 500 EKN------------------------------------GCAPNVVTFNTLMHGFLQNNK 523
           E++                                    G   N+   N L++G+ +N +
Sbjct: 315 ERSEGMVLDEYAYGVLIDGYCRVCKMDDAVRLRDEMLNVGLRMNLFICNALINGYCKNGQ 374

Query: 524 TSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
            S+   LL +M + +  L P+  ++S ++D
Sbjct: 375 VSEAERLLMRMVDWD--LEPESYSYSTLMD 402


>gi|255584017|ref|XP_002532754.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223527505|gb|EEF29631.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 721

 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 153/558 (27%), Positives = 253/558 (45%), Gaps = 75/558 (13%)

Query: 55  NLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRH-YDA---------------VISFY 98
           + N+A+    +M   Q    I  +N+L   + K+R  ++A               V+++Y
Sbjct: 146 DFNKAKEMIHWMEFNQCKLSIVVYNVLIHGLCKSRRIWEALEIKNCLMQKGLEANVVTYY 205

Query: 99  ----------RKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGV 148
                     +++   GL  + +T +ILI+ F       C    +  A      M    +
Sbjct: 206 GKFNEAELLFKEMGEKGLCANHITYSILIDSF-------CRRGEMDNAIGFLDKMTKASI 258

Query: 149 RPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGL 208
              V  Y +LING+C+ GN S A     +M+    + GL     + +Y+ +I   C EG 
Sbjct: 259 EFTVYPYNSLINGYCKLGNASAAKYYFDEMI----DKGLTP--TVVTYTSLISGYCNEGE 312

Query: 209 VDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNV 268
             KA +++ EM  +GI+P     T +I G C A    E   LF EM +    P+ +T+NV
Sbjct: 313 WHKAFKVYNEMTAKGISPNTYTFTAIISGLCRANMMAEAIRLFGEMKERKIMPSEVTYNV 372

Query: 269 MIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKG 328
           MI+  C+ G I+EA  LL+ M+ +G  PD +TY  L+ G C VGR+  A+E    +H   
Sbjct: 373 MIEGHCRSGNISEAFHLLDEMVGKGFVPDTYTYRPLISGLCSVGRVSEAKEFVDDLHKDH 432

Query: 329 CKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQ 388
            K   + Y+ L++GYCK    ++A+S  R ++  GV   ++ Y  L+ G  +        
Sbjct: 433 HKLNNMCYSALVHGYCKEGRFKDAVSACRVMVERGVAMDLVCYAILIDGTAREHDTRALF 492

Query: 389 KLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGL 448
            L  EM  + + PD   Y  +ID   K   ++EA  L+ ++        +  +  LI+GL
Sbjct: 493 GLLKEMHNHGLRPDAVIYTNMIDRHSKAGNLKEAFGLWDIMVDEGCLPNVVTYTALINGL 552

Query: 449 CKAGRLDNAWEL----------------------------------FHKLPQKGLVPTVV 474
           CKAG +D A  L                                   H    KG + T V
Sbjct: 553 CKAGLMDKAELLSKETLVSDVTPNHITYGCFLDHLTRGGNMEKAVQLHHAMLKGFLATTV 612

Query: 475 TYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKM 534
           +Y+I+I G CR GK+E+A   L  M  N   P+ +T++T+++   + +   + ++L H M
Sbjct: 613 SYNILIRGFCRLGKIEEATKLLHGMTDNDILPDYITYSTIIYEQCKRSNLQEAIKLWHTM 672

Query: 535 AEPERNLVPDDTTFSIVV 552
              ++ L PD   +S +V
Sbjct: 673 L--DKGLKPDTLAYSFLV 688



 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 150/557 (26%), Positives = 251/557 (45%), Gaps = 49/557 (8%)

Query: 13  SETVSKVKLSSLFKSPRQIAAVSSPETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPS 72
           S  V  V +  L KS R   A+      + + L  N  +     NEA   F  M      
Sbjct: 165 SIVVYNVLIHGLCKSRRIWEALEIKNCLMQKGLEANVVTYYGKFNEAELLFKEMGEKGLC 224

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
               ++++L  +  +    D  I F  K+    +       N LIN       G C    
Sbjct: 225 ANHITYSILIDSFCRRGEMDNAIGFLDKMTKASIEFTVYPYNSLIN-------GYCKLGN 277

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
              A + F  MI  G+ P V+TY +LI+G+C  G    A +++ +M +     G+    N
Sbjct: 278 ASAAKYYFDEMIDKGLTPTVVTYTSLISGYCNEGEWHKAFKVYNEMTA----KGI--SPN 331

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
            ++++ II  LC+  ++ +A  LF EMK R I P+ V    +I G C +GN  E   L  
Sbjct: 332 TYTFTAIISGLCRANMMAEAIRLFGEMKERKIMPSEVTYNVMIEGHCRSGNISEAFHLLD 391

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
           EM+  G  P+  T+  +I  LC  G+++EA   ++ + +     +   Y++L+ GYC  G
Sbjct: 392 EMVGKGFVPDTYTYRPLISGLCSVGRVSEAKEFVDDLHKDHHKLNNMCYSALVHGYCKEG 451

Query: 313 R--------------------------ID-TARE--------IFLSMHSKGCKHTVVSYN 337
           R                          ID TARE        +   MH+ G +   V Y 
Sbjct: 452 RFKDAVSACRVMVERGVAMDLVCYAILIDGTAREHDTRALFGLLKEMHNHGLRPDAVIYT 511

Query: 338 ILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLY 397
            +I+ + K  N++EA  L+  ++  G    V+TY  L++GL +AG    A+ L  E  + 
Sbjct: 512 NMIDRHSKAGNLKEAFGLWDIMVDEGCLPNVVTYTALINGLCKAGLMDKAELLSKETLVS 571

Query: 398 NVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNA 457
           +V P+  TY   +D L +   +++AV+L H + +  F      +N LI G C+ G+++ A
Sbjct: 572 DVTPNHITYGCFLDHLTRGGNMEKAVQLHHAM-LKGFLATTVSYNILIRGFCRLGKIEEA 630

Query: 458 WELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHG 517
            +L H +    ++P  +TYS +I+  C++  L++A      M   G  P+ + ++ L+HG
Sbjct: 631 TKLLHGMTDNDILPDYITYSTIIYEQCKRSNLQEAIKLWHTMLDKGLKPDTLAYSFLVHG 690

Query: 518 FLQNNKTSKVVELLHKM 534
                +  K  EL  +M
Sbjct: 691 CCIAGELEKAFELRDEM 707



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 123/410 (30%), Positives = 208/410 (50%), Gaps = 17/410 (4%)

Query: 150 PDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLV 209
           P+V T   L+NG  R    +  L L   +VS + +       +I+ YS ++ SLC+    
Sbjct: 94  PEVRTLSALLNGLLRFRRFNDVLLLFDDIVSANVQ------PDIYIYSAVVRSLCELKDF 147

Query: 210 DKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVM 269
           +KAKE+   M+      ++VV   LIHG C +    E   +   ++  G   N++T+   
Sbjct: 148 NKAKEMIHWMEFNQCKLSIVVYNVLIHGLCKSRRIWEALEIKNCLMQKGLEANVVTYY-- 205

Query: 270 IDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGC 329
                  GK NEA  L + M ++GL  +  TY+ L+D +C  G +D A      M     
Sbjct: 206 -------GKFNEAELLFKEMGEKGLCANHITYSILIDSFCRRGEMDNAIGFLDKMTKASI 258

Query: 330 KHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQK 389
           + TV  YN LINGYCK+ N   A   + ++I  G+  TV+TY +L+SG    G+   A K
Sbjct: 259 EFTVYPYNSLINGYCKLGNASAAKYYFDEMIDKGLTPTVVTYTSLISGYCNEGEWHKAFK 318

Query: 390 LFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLC 449
           +++EM    + P+  T+  +I GLC+ N + EA++LF  ++  K       +N +I+G C
Sbjct: 319 VYNEMTAKGISPNTYTFTAIISGLCRANMMAEAIRLFGEMKERKIMPSEVTYNVMIEGHC 378

Query: 450 KAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVV 509
           ++G +  A+ L  ++  KG VP   TY  +I GLC  G++ +A +F+  + K+    N +
Sbjct: 379 RSGNISEAFHLLDEMVGKGFVPDTYTYRPLISGLCSVGRVSEAKEFVDDLHKDHHKLNNM 438

Query: 510 TFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDE 559
            ++ L+HG+ +  +    V     M   ER +  D   ++I++D  A++ 
Sbjct: 439 CYSALVHGYCKEGRFKDAVSACRVMV--ERGVAMDLVCYAILIDGTAREH 486



 Score =  198 bits (503), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 136/469 (28%), Positives = 218/469 (46%), Gaps = 16/469 (3%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
           N  ++  CK G  N + A+Y+F  M     +P + ++  L         +      Y ++
Sbjct: 266 NSLINGYCKLG--NASAAKYYFDEMIDKGLTPTVVTYTSLISGYCNEGEWHKAFKVYNEM 323

Query: 102 VSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLING 161
            + G+ P+  T   +I+       GLC  N + EA  LF  M    + P  +TY  +I G
Sbjct: 324 TAKGISPNTYTFTAIIS-------GLCRANMMAEAIRLFGEMKERKIMPSEVTYNVMIEG 376

Query: 162 FCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKG 221
            CR+GN+S A  L  +MV      G +  T  ++Y  +I  LC  G V +AKE   ++  
Sbjct: 377 HCRSGNISEAFHLLDEMVG----KGFVPDT--YTYRPLISGLCSVGRVSEAKEFVDDLHK 430

Query: 222 RGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINE 281
                  +  + L+HG+C  G +++       M++ G   +L+ + ++ID   +      
Sbjct: 431 DHHKLNNMCYSALVHGYCKEGRFKDAVSACRVMVERGVAMDLVCYAILIDGTAREHDTRA 490

Query: 282 ANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILIN 341
             GLL+ M   GL PD   Y +++D +   G +  A  ++  M  +GC   VV+Y  LIN
Sbjct: 491 LFGLLKEMHNHGLRPDAVIYTNMIDRHSKAGNLKEAFGLWDIMVDEGCLPNVVTYTALIN 550

Query: 342 GYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEP 401
           G CK   +++A  L ++ + + V    ITY   L  L + G    A +L   M L     
Sbjct: 551 GLCKAGLMDKAELLSKETLVSDVTPNHITYGCFLDHLTRGGNMEKAVQLHHAM-LKGFLA 609

Query: 402 DLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELF 461
              +YNILI G C+   ++EA KL H +  N        ++ +I   CK   L  A +L+
Sbjct: 610 TTVSYNILIRGFCRLGKIEEATKLLHGMTDNDILPDYITYSTIIYEQCKRSNLQEAIKLW 669

Query: 462 HKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVT 510
           H +  KGL P  + YS ++HG C  G+LEKA +    M + G   N VT
Sbjct: 670 HTMLDKGLKPDTLAYSFLVHGCCIAGELEKAFELRDEMIRRGMRSNHVT 718



 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 129/459 (28%), Positives = 221/459 (48%), Gaps = 24/459 (5%)

Query: 99  RKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTL 158
           R +    L+P+  TL+ L+N       GL    R  +   LF ++++  V+PD+  Y  +
Sbjct: 85  RLMKDCNLMPEVRTLSALLN-------GLLRFRRFNDVLLLFDDIVSANVQPDIYIYSAV 137

Query: 159 INGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLE 218
           +   C   + + A    K+M+     N    K +I  Y+++I  LCK   + +A E+   
Sbjct: 138 VRSLCELKDFNKA----KEMIHWMEFNQ--CKLSIVVYNVLIHGLCKSRRIWEALEIKNC 191

Query: 219 MKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGK 278
           +  +G+   VV            G + E   LF EM + G   N +T++++ID  C+ G+
Sbjct: 192 LMQKGLEANVVTYY---------GKFNEAELLFKEMGEKGLCANHITYSILIDSFCRRGE 242

Query: 279 INEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNI 338
           ++ A G L+ M +  +    + YNSL++GYC +G    A+  F  M  KG   TVV+Y  
Sbjct: 243 MDNAIGFLDKMTKASIEFTVYPYNSLINGYCKLGNASAAKYYFDEMIDKGLTPTVVTYTS 302

Query: 339 LINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYN 398
           LI+GYC      +A  +Y ++ + G+     T+  ++SGL +A     A +LF EMK   
Sbjct: 303 LISGYCNEGEWHKAFKVYNEMTAKGISPNTYTFTAIISGLCRANMMAEAIRLFGEMKERK 362

Query: 399 VEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAW 458
           + P   TYN++I+G C++  + EA  L   +    F      +  LI GLC  GR+  A 
Sbjct: 363 IMPSEVTYNVMIEGHCRSGNISEAFHLLDEMVGKGFVPDTYTYRPLISGLCSVGRVSEAK 422

Query: 459 ELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGF 518
           E    L +       + YS ++HG C++G+ + A      M + G A ++V +  L+ G 
Sbjct: 423 EFVDDLHKDHHKLNNMCYSALVHGYCKEGRFKDAVSACRVMVERGVAMDLVCYAILIDGT 482

Query: 519 LQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAK 557
            + + T  +  LL +M      L PD   ++ ++D  +K
Sbjct: 483 AREHDTRALFGLLKEMH--NHGLRPDAVIYTNMIDRHSK 519



 Score =  182 bits (461), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 140/585 (23%), Positives = 255/585 (43%), Gaps = 43/585 (7%)

Query: 3   SRTQFRCLFSSETVSKVKLSSLFKS--PRQIAAVSSPETQLNE-FLHENCKSG------- 52
           ++ +F C F S TV + K    F S     +    S     N+ F+  N K         
Sbjct: 18  TKPKFFCNFRSSTVIQDKEDFQFISILTSILRGKQSWRIAFNDPFISRNLKPSHVDKVLM 77

Query: 53  IINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLT 112
           +++LN++R     M      P + + + L   + + R ++ V+  +  +VS  + PD   
Sbjct: 78  MLSLNDSRL----MKDCNLMPEVRTLSALLNGLLRFRRFNDVLLLFDDIVSANVQPDIYI 133

Query: 113 LNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVAL 172
            + ++       R LC      +A  +   M     +  ++ Y  LI+G C++  +  AL
Sbjct: 134 YSAVV-------RSLCELKDFNKAKEMIHWMEFNQCKLSIVVYNVLIHGLCKSRRIWEAL 186

Query: 173 RLHKKMVSGDYENGLISK--------------------TNIFSYSIIIDSLCKEGLVDKA 212
            +   ++    E  +++                      N  +YSI+IDS C+ G +D A
Sbjct: 187 EIKNCLMQKGLEANVVTYYGKFNEAELLFKEMGEKGLCANHITYSILIDSFCRRGEMDNA 246

Query: 213 KELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDC 272
                +M    I   V    +LI+G+C  GN       F EM+D G  P ++T+  +I  
Sbjct: 247 IGFLDKMTKASIEFTVYPYNSLINGYCKLGNASAAKYYFDEMIDKGLTPTVVTYTSLISG 306

Query: 273 LCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHT 332
            C  G+ ++A  +   M  +G++P+ +T+ +++ G C    +  A  +F  M  +    +
Sbjct: 307 YCNEGEWHKAFKVYNEMTAKGISPNTYTFTAIISGLCRANMMAEAIRLFGEMKERKIMPS 366

Query: 333 VVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFD 392
            V+YN++I G+C+  N+ EA  L  +++  G      TY  L+SGL   G+   A++  D
Sbjct: 367 EVTYNVMIEGHCRSGNISEAFHLLDEMVGKGFVPDTYTYRPLISGLCSVGRVSEAKEFVD 426

Query: 393 EMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAG 452
           ++   + + +   Y+ L+ G CK    ++AV    ++        +  +  LIDG  +  
Sbjct: 427 DLHKDHHKLNNMCYSALVHGYCKEGRFKDAVSACRVMVERGVAMDLVCYAILIDGTAREH 486

Query: 453 RLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFN 512
                + L  ++   GL P  V Y+ MI    + G L++A      M   GC PNVVT+ 
Sbjct: 487 DTRALFGLLKEMHNHGLRPDAVIYTNMIDRHSKAGNLKEAFGLWDIMVDEGCLPNVVTYT 546

Query: 513 TLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAK 557
            L++G  +     K  ELL K      ++ P+  T+   +D L +
Sbjct: 547 ALINGLCKAGLMDK-AELLSKETLVS-DVTPNHITYGCFLDHLTR 589



 Score = 99.0 bits (245), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 69/255 (27%), Positives = 118/255 (46%), Gaps = 17/255 (6%)

Query: 52  GIINLNEARYFFGYMTHMQP---SPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           G    ++ R  FG +  M      P    +  +    +K  +       +  +V  G LP
Sbjct: 481 GTAREHDTRALFGLLKEMHNHGLRPDAVIYTNMIDRHSKAGNLKEAFGLWDIMVDEGCLP 540

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           + +T   LIN       GLC    + +A  L K  +   V P+ ITYG  ++   R GN+
Sbjct: 541 NVVTYTALIN-------GLCKAGLMDKAELLSKETLVSDVTPNHITYGCFLDHLTRGGNM 593

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
             A++LH  M+ G      ++ T   SY+I+I   C+ G +++A +L   M    I P  
Sbjct: 594 EKAVQLHHAMLKG-----FLATT--VSYNILIRGFCRLGKIEEATKLLHGMTDNDILPDY 646

Query: 229 VVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLEL 288
           +  +T+I+  C   N +E   L+  MLD G +P+ L ++ ++   C  G++ +A  L + 
Sbjct: 647 ITYSTIIYEQCKRSNLQEAIKLWHTMLDKGLKPDTLAYSFLVHGCCIAGELEKAFELRDE 706

Query: 289 MIQRGLNPDRFTYNS 303
           MI+RG+  +  T  S
Sbjct: 707 MIRRGMRSNHVTPKS 721


>gi|296088147|emb|CBI35592.3| unnamed protein product [Vitis vinifera]
          Length = 883

 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 136/431 (31%), Positives = 219/431 (50%), Gaps = 9/431 (2%)

Query: 128 CVENRIKEATWLFKNMIAF-GVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENG 186
           C  + + EA  +F+ M      RP+ +TY  LI+G C  G L  A +L ++MV    E G
Sbjct: 240 CRRDDLGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMV----EKG 295

Query: 187 LISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEE 246
               T   +Y+++I + C  G+ DKA ++  EM  +   P V   T LI   C  G  EE
Sbjct: 296 CQPSTR--TYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEE 353

Query: 247 VNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMD 306
            NG+F +ML  G  P ++TFN +I+  CK G +  A  LL +M +    P+  TYN LM+
Sbjct: 354 ANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELME 413

Query: 307 GYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQ 366
           G C V +   A  +   +   G     V+YNIL++G+CK   +  A +++  + S G+  
Sbjct: 414 GLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEP 473

Query: 367 TVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLF 426
              T+  L+ GL + G+   A  +   M    +  D  T+  LIDG CK    ++   LF
Sbjct: 474 DGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLF 533

Query: 427 HMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRK 486
             +  N+       FNC +D L K  +L+ A  +  K+ + GLVP+VVT++I+I G CR 
Sbjct: 534 ENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRA 593

Query: 487 GKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDT 546
           G+   +   L  M++ GC+PNV T+  +++G   N +  +   +L  M+     + P+  
Sbjct: 594 GETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMS--SFGVSPNHF 651

Query: 547 TFSIVVDLLAK 557
           T++++V    K
Sbjct: 652 TYAVLVKAHVK 662



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 138/515 (26%), Positives = 239/515 (46%), Gaps = 61/515 (11%)

Query: 49  CKSGIINLNEA------RYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLV 102
           CK+G +   E       R  FG  TH+  S       L+     ++   +A   F +   
Sbjct: 205 CKNGFVQAAEMFCCKVLRLGFGLDTHVCTS-------LVLANCRRDDLGEAFRVFEKMSK 257

Query: 103 SIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGF 162
                P+ +T +ILI+       GLC   R++EA  L + M+  G +P   TY  LI   
Sbjct: 258 EENCRPNSVTYSILIH-------GLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAK 310

Query: 163 CRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGR 222
           C  G    A+++  +M +           N+ +Y+I+ID LC+EG +++A  +F +M   
Sbjct: 311 CDIGMTDKAMKMLDEMATK------ACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKH 364

Query: 223 GINPAVVVCTTLIHGFC-------------------CAGNWEEVNGL------------- 250
           G+ P ++    LI+G+C                   C  N    N L             
Sbjct: 365 GLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKA 424

Query: 251 ---FIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDG 307
                 ++D G  P+ +T+N+++D  CK G++N A  +   M   GL PD FT+ +L+DG
Sbjct: 425 FLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDG 484

Query: 308 YCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQT 367
            C +GR++ A  I  SM  KG     V++  LI+G+CKI   ++   L+  ++ N    T
Sbjct: 485 LCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTT 544

Query: 368 VITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFH 427
             T+N  L  L +  +   A  +  +M  Y + P + T+ ILI+G C+      ++K+  
Sbjct: 545 AHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLE 604

Query: 428 MLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKG 487
            ++       +  +  +I+GLC  GR++ A  +   +   G+ P   TY++++    + G
Sbjct: 605 RMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAG 664

Query: 488 KLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNN 522
           +L++A   +  M KNGC PN   ++ L+ GF+ +N
Sbjct: 665 RLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSN 699



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 132/439 (30%), Positives = 223/439 (50%), Gaps = 9/439 (2%)

Query: 130 ENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLIS 189
           EN + +       M   G R     Y TL+    +     VA  ++++MV+  +  G I 
Sbjct: 137 ENGVVKLMGALDGMTELGFRLSYPCYSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGID 196

Query: 190 KTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNG 249
                 Y  ++++LCK G V  A+    ++   G      VCT+L+   C   +  E   
Sbjct: 197 ------YRTVVNALCKNGFVQAAEMFCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFR 250

Query: 250 LFIEM-LDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGY 308
           +F +M  +   RPN +T++++I  LC+ G++ EA  L + M+++G  P   TY  L+   
Sbjct: 251 VFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAK 310

Query: 309 CLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTV 368
           C +G  D A ++   M +K C   V +Y ILI+  C+   +EEA  ++R+++ +G+   +
Sbjct: 311 CDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGI 370

Query: 369 ITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHM 428
           IT+N L++G  + G    A +L   M+  N +P++ TYN L++GLC+ +   +A  L   
Sbjct: 371 ITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRR 430

Query: 429 LEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGK 488
           +  N        +N L+DG CK G+L+ A+ +F+ +   GL P   T++ +I GLC+ G+
Sbjct: 431 VVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGR 490

Query: 489 LEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTF 548
           LE+AN  L  M K G + + VTF  L+ G  +  K   V  L   M E     +    TF
Sbjct: 491 LEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVE--NRCLTTAHTF 548

Query: 549 SIVVDLLAKDEKYHECSAV 567
           +  +D L KD K +E +A+
Sbjct: 549 NCFLDALGKDYKLNEANAM 567



 Score =  162 bits (409), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 139/564 (24%), Positives = 238/564 (42%), Gaps = 113/564 (20%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCF------------ 120
           P + ++ +L   + +    +     +RK++  GL P  +T N LIN +            
Sbjct: 333 PNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQL 392

Query: 121 ------GNKE----------RGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCR 164
                 GN +           GLC  ++  +A  L + ++  G+ PD +TY  L++GFC+
Sbjct: 393 LSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCK 452

Query: 165 TGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGI 224
            G L++A  +   M S   E       + F+++ +ID LCK G +++A  +   M  +GI
Sbjct: 453 EGQLNMAFNIFNSMNSAGLE------PDGFTFTALIDGLCKLGRLEQANGILGSMVKKGI 506

Query: 225 NPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANG 284
           +   V  T LI G C  G  ++V  LF  M++        TFN  +D L K  K+NEAN 
Sbjct: 507 SLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANA 566

Query: 285 LL-----------------------------------ELMIQRGLNPDRFTYNSLMDGYC 309
           +L                                   E M Q G +P+ +TY  +++G C
Sbjct: 567 MLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLC 626

Query: 310 LVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVI 369
             GR++ A  I  SM S G      +Y +L+  + K   ++ A  +   ++ NG +    
Sbjct: 627 NNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSH 686

Query: 370 TYNTLLSGLFQAGQAGYAQKL-----FDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVK 424
            Y+ LLSG   +  A  A+ L      D   L + E D             NNC+   +K
Sbjct: 687 IYSALLSGFVLSNTAIGARALSSTGDLDARSLSSEEND-------------NNCLSNEIK 733

Query: 425 LFHMLEMNKFEFGI---EIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIH 481
                     + G+   +++N L+ GLCK GR+  A +L   + + GL P     SI+ H
Sbjct: 734 ----------KCGVPTEDLYNFLVVGLCKEGRIIEADQLTQDMVKHGLFPDKAISSIIEH 783

Query: 482 GLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELL-----HKMAE 536
             C+  K +   +F+  +  N   P+  ++  ++HG     +  +  +L+     H   E
Sbjct: 784 -YCKTCKYDNCLEFMKLVLDNKFVPSFASYCWVIHGLRNEGRVQEAQKLVSDLVRHTGIE 842

Query: 537 PERNLVPDDTTFSIVVDLLAKDEK 560
            E  + P        ++ L K+E+
Sbjct: 843 EEVEVTPS-------IEFLMKEEE 859


>gi|224069254|ref|XP_002302938.1| predicted protein [Populus trichocarpa]
 gi|222844664|gb|EEE82211.1| predicted protein [Populus trichocarpa]
          Length = 599

 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 130/396 (32%), Positives = 213/396 (53%), Gaps = 18/396 (4%)

Query: 94  VISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVI 153
            + FY +++  G  P+  T N+L+N        LC E ++K+A  +F  +   G++P  +
Sbjct: 216 ALEFYLEILDSGYPPNVYTFNVLMN-------RLCKEGKVKDAQLIFDEIRKTGLQPTAV 268

Query: 154 TYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAK 213
           ++ TLING+C++GNL    RL  KMV  ++        ++F+YS +ID LCKE  ++ A 
Sbjct: 269 SFNTLINGYCKSGNLEEGFRL--KMVMEEFR----VFPDVFTYSALIDGLCKECQLEDAN 322

Query: 214 ELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCL 273
            LF EM  RG+ P  V  TTLI+G C  G  +    ++ +M   G + +L+ +N +ID L
Sbjct: 323 HLFKEMCDRGLVPNDVTFTTLINGQCKNGRVDLALEIYQQMFTKGLKADLVLYNTLIDGL 382

Query: 274 CKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTV 333
           CKGG   EA   +  M +RGL PD+FTY +L+DG C  G ++ A E+   M  +G +   
Sbjct: 383 CKGGYFREARKFVGEMTKRGLIPDKFTYTTLLDGSCKEGDLELALEMRKEMVKEGIQLDN 442

Query: 334 VSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDE 393
           V++  +I+G C+   + +A    R+++  G++    TY  ++ G  + G      KL  E
Sbjct: 443 VAFTAIISGLCRDGKIVDAERTLREMLRAGLKPDDGTYTMVMDGFCKKGDVKMGFKLLKE 502

Query: 394 MKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFH-MLEMNKFEFGIEIFNCLIDGLCKAG 452
           M+     P + TYN+L++GLCK   V+ A  L + ML +      I  +N L+ G CK G
Sbjct: 503 MQSDGHIPGVITYNVLMNGLCKQGQVKNADMLLNAMLNLGVVPDDI-TYNILLQGHCKHG 561

Query: 453 RLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGK 488
           +L +   +  ++   GLV    +Y  ++H L +  K
Sbjct: 562 KLGDFQNVKTEM---GLVSDYASYRSLLHELSKASK 594



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 115/389 (29%), Positives = 207/389 (53%), Gaps = 44/389 (11%)

Query: 170 VALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVV 229
           VAL  + +++   Y        N+++++++++ LCKEG V  A+ +F E++  G+ P  V
Sbjct: 215 VALEFYLEILDSGYP------PNVYTFNVLMNRLCKEGKVKDAQLIFDEIRKTGLQPTAV 268

Query: 230 VCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELM 289
              TLI+G+C +GN EE   L + M +    P++ T++ +ID LCK  ++ +AN L + M
Sbjct: 269 SFNTLINGYCKSGNLEEGFRLKMVMEEFRVFPDVFTYSALIDGLCKECQLEDANHLFKEM 328

Query: 290 IQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCK---- 345
             RGL P+  T+ +L++G C  GR+D A EI+  M +KG K  +V YN LI+G CK    
Sbjct: 329 CDRGLVPNDVTFTTLINGQCKNGRVDLALEIYQQMFTKGLKADLVLYNTLIDGLCKGGYF 388

Query: 346 ------------------------ILN-------VEEAMSLYRQIISNGVRQTVITYNTL 374
                                   +L+       +E A+ + ++++  G++   + +  +
Sbjct: 389 REARKFVGEMTKRGLIPDKFTYTTLLDGSCKEGDLELALEMRKEMVKEGIQLDNVAFTAI 448

Query: 375 LSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKF 434
           +SGL + G+   A++   EM    ++PD  TY +++DG CK   V+   KL   ++ +  
Sbjct: 449 ISGLCRDGKIVDAERTLREMLRAGLKPDDGTYTMVMDGFCKKGDVKMGFKLLKEMQSDGH 508

Query: 435 EFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKAND 494
             G+  +N L++GLCK G++ NA  L + +   G+VP  +TY+I++ G C+ GKL    D
Sbjct: 509 IPGVITYNVLMNGLCKQGQVKNADMLLNAMLNLGVVPDDITYNILLQGHCKHGKL---GD 565

Query: 495 FLLYMEKNGCAPNVVTFNTLMHGFLQNNK 523
           F     + G   +  ++ +L+H   + +K
Sbjct: 566 FQNVKTEMGLVSDYASYRSLLHELSKASK 594



 Score =  184 bits (468), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 111/374 (29%), Positives = 192/374 (51%), Gaps = 10/374 (2%)

Query: 212 AKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMID 271
           A E +LE+   G  P V     L++  C  G  ++   +F E+   G +P  ++FN +I+
Sbjct: 216 ALEFYLEILDSGYPPNVYTFNVLMNRLCKEGKVKDAQLIFDEIRKTGLQPTAVSFNTLIN 275

Query: 272 CLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKH 331
             CK G + E   L  +M +  + PD FTY++L+DG C   +++ A  +F  M  +G   
Sbjct: 276 GYCKSGNLEEGFRLKMVMEEFRVFPDVFTYSALIDGLCKECQLEDANHLFKEMCDRGLVP 335

Query: 332 TVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLF 391
             V++  LING CK   V+ A+ +Y+Q+ + G++  ++ YNTL+ GL + G    A+K  
Sbjct: 336 NDVTFTTLINGQCKNGRVDLALEIYQQMFTKGLKADLVLYNTLIDGLCKGGYFREARKFV 395

Query: 392 DEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKA 451
            EM    + PD  TY  L+DG CK   ++ A+++   +     +     F  +I GLC+ 
Sbjct: 396 GEMTKRGLIPDKFTYTTLLDGSCKEGDLELALEMRKEMVKEGIQLDNVAFTAIISGLCRD 455

Query: 452 GRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTF 511
           G++ +A     ++ + GL P   TY++++ G C+KG ++     L  M+ +G  P V+T+
Sbjct: 456 GKIVDAERTLREMLRAGLKPDDGTYTMVMDGFCKKGDVKMGFKLLKEMQSDGHIPGVITY 515

Query: 512 NTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSK-- 569
           N LM+G  +  +      LL+ M      +VPDD T++I++    K  K  +   V    
Sbjct: 516 NVLMNGLCKQGQVKNADMLLNAML--NLGVVPDDITYNILLQGHCKHGKLGDFQNVKTEM 573

Query: 570 ------SSYRACLY 577
                 +SYR+ L+
Sbjct: 574 GLVSDYASYRSLLH 587



 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 120/375 (32%), Positives = 189/375 (50%), Gaps = 18/375 (4%)

Query: 41  LNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRK 100
            N  ++  CK G   + +A+  F  +      P   SFN L     K+ + +        
Sbjct: 235 FNVLMNRLCKEG--KVKDAQLIFDEIRKTGLQPTAVSFNTLINGYCKSGNLEEGFRLKMV 292

Query: 101 LVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLIN 160
           +    + PD  T + LI+       GLC E ++++A  LFK M   G+ P+ +T+ TLIN
Sbjct: 293 MEEFRVFPDVFTYSALID-------GLCKECQLEDANHLFKEMCDRGLVPNDVTFTTLIN 345

Query: 161 GFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMK 220
           G C+ G + +AL ++++M    +  GL  K ++  Y+ +ID LCK G   +A++   EM 
Sbjct: 346 GQCKNGRVDLALEIYQQM----FTKGL--KADLVLYNTLIDGLCKGGYFREARKFVGEMT 399

Query: 221 GRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKIN 280
            RG+ P     TTL+ G C  G+ E    +  EM+  G + + + F  +I  LC+ GKI 
Sbjct: 400 KRGLIPDKFTYTTLLDGSCKEGDLELALEMRKEMVKEGIQLDNVAFTAIISGLCRDGKIV 459

Query: 281 EANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILI 340
           +A   L  M++ GL PD  TY  +MDG+C  G +    ++   M S G    V++YN+L+
Sbjct: 460 DAERTLREMLRAGLKPDDGTYTMVMDGFCKKGDVKMGFKLLKEMQSDGHIPGVITYNVLM 519

Query: 341 NGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVE 400
           NG CK   V+ A  L   +++ GV    ITYN LL G  + G+ G  Q +  EM L +  
Sbjct: 520 NGLCKQGQVKNADMLLNAMLNLGVVPDDITYNILLQGHCKHGKLGDFQNVKTEMGLVS-- 577

Query: 401 PDLSTYNILIDGLCK 415
            D ++Y  L+  L K
Sbjct: 578 -DYASYRSLLHELSK 591



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 74/279 (26%), Positives = 146/279 (52%), Gaps = 2/279 (0%)

Query: 275 KGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVV 334
           + GK + ++    ++  +G     F +++LM  Y   G +  A + F        K    
Sbjct: 139 RKGKGSASSVFASILETKGTLSSSFVFDALMSVYTEFGYVSDAIQCFRLTKKHNLKIPFN 198

Query: 335 SYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEM 394
               L+    K+ +   A+  Y +I+ +G    V T+N L++ L + G+   AQ +FDE+
Sbjct: 199 GCKCLLERMIKMSSPMVALEFYLEILDSGYPPNVYTFNVLMNRLCKEGKVKDAQLIFDEI 258

Query: 395 KLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRL 454
           +   ++P   ++N LI+G CK+  ++E  +L  ++E  +    +  ++ LIDGLCK  +L
Sbjct: 259 RKTGLQPTAVSFNTLINGYCKSGNLEEGFRLKMVMEEFRVFPDVFTYSALIDGLCKECQL 318

Query: 455 DNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTL 514
           ++A  LF ++  +GLVP  VT++ +I+G C+ G+++ A +    M   G   ++V +NTL
Sbjct: 319 EDANHLFKEMCDRGLVPNDVTFTTLINGQCKNGRVDLALEIYQQMFTKGLKADLVLYNTL 378

Query: 515 MHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
           + G  +     +  + + +M   +R L+PD  T++ ++D
Sbjct: 379 IDGLCKGGYFREARKFVGEMT--KRGLIPDKFTYTTLLD 415


>gi|359494794|ref|XP_002267896.2| PREDICTED: pentatricopeptide repeat-containing protein At3g07290,
           mitochondrial [Vitis vinifera]
          Length = 876

 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 135/426 (31%), Positives = 218/426 (51%), Gaps = 9/426 (2%)

Query: 128 CVENRIKEATWLFKNMIAF-GVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENG 186
           C  + + EA  +F+ M      RP+ +TY  LI+G C  G L  A +L ++MV    E G
Sbjct: 217 CRRDDLGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMV----EKG 272

Query: 187 LISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEE 246
               T   +Y+++I + C  G+ DKA ++  EM  +   P V   T LI   C  G  EE
Sbjct: 273 CQPSTR--TYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEE 330

Query: 247 VNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMD 306
            NG+F +ML  G  P ++TFN +I+  CK G +  A  LL +M +    P+  TYN LM+
Sbjct: 331 ANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELME 390

Query: 307 GYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQ 366
           G C V +   A  +   +   G     V+YNIL++G+CK   +  A +++  + S G+  
Sbjct: 391 GLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEP 450

Query: 367 TVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLF 426
              T+  L+ GL + G+   A  +   M    +  D  T+  LIDG CK    ++   LF
Sbjct: 451 DGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLF 510

Query: 427 HMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRK 486
             +  N+       FNC +D L K  +L+ A  +  K+ + GLVP+VVT++I+I G CR 
Sbjct: 511 ENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRA 570

Query: 487 GKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDT 546
           G+   +   L  M++ GC+PNV T+  +++G   N +  +   +L  M+     + P+  
Sbjct: 571 GETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMS--SFGVSPNHF 628

Query: 547 TFSIVV 552
           T++++V
Sbjct: 629 TYAVLV 634



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 138/515 (26%), Positives = 239/515 (46%), Gaps = 61/515 (11%)

Query: 49  CKSGIINLNEA------RYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLV 102
           CK+G +   E       R  FG  TH+  S       L+     ++   +A   F +   
Sbjct: 182 CKNGFVQAAEMFCCKVLRLGFGLDTHVCTS-------LVLANCRRDDLGEAFRVFEKMSK 234

Query: 103 SIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGF 162
                P+ +T +ILI+       GLC   R++EA  L + M+  G +P   TY  LI   
Sbjct: 235 EENCRPNSVTYSILIH-------GLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAK 287

Query: 163 CRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGR 222
           C  G    A+++  +M +           N+ +Y+I+ID LC+EG +++A  +F +M   
Sbjct: 288 CDIGMTDKAMKMLDEMATK------ACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKH 341

Query: 223 GINPAVVVCTTLIHGFC-------------------CAGNWEEVNGL------------- 250
           G+ P ++    LI+G+C                   C  N    N L             
Sbjct: 342 GLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKA 401

Query: 251 ---FIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDG 307
                 ++D G  P+ +T+N+++D  CK G++N A  +   M   GL PD FT+ +L+DG
Sbjct: 402 FLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDG 461

Query: 308 YCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQT 367
            C +GR++ A  I  SM  KG     V++  LI+G+CKI   ++   L+  ++ N    T
Sbjct: 462 LCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTT 521

Query: 368 VITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFH 427
             T+N  L  L +  +   A  +  +M  Y + P + T+ ILI+G C+      ++K+  
Sbjct: 522 AHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLE 581

Query: 428 MLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKG 487
            ++       +  +  +I+GLC  GR++ A  +   +   G+ P   TY++++    + G
Sbjct: 582 RMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAG 641

Query: 488 KLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNN 522
           +L++A   +  M KNGC PN   ++ L+ GF+ +N
Sbjct: 642 RLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSN 676



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 132/439 (30%), Positives = 223/439 (50%), Gaps = 9/439 (2%)

Query: 130 ENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLIS 189
           EN + +       M   G R     Y TL+    +     VA  ++++MV+  +  G I 
Sbjct: 114 ENGVVKLMGALDGMTELGFRLSYPCYSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGID 173

Query: 190 KTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNG 249
                 Y  ++++LCK G V  A+    ++   G      VCT+L+   C   +  E   
Sbjct: 174 ------YRTVVNALCKNGFVQAAEMFCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFR 227

Query: 250 LFIEM-LDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGY 308
           +F +M  +   RPN +T++++I  LC+ G++ EA  L + M+++G  P   TY  L+   
Sbjct: 228 VFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAK 287

Query: 309 CLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTV 368
           C +G  D A ++   M +K C   V +Y ILI+  C+   +EEA  ++R+++ +G+   +
Sbjct: 288 CDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGI 347

Query: 369 ITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHM 428
           IT+N L++G  + G    A +L   M+  N +P++ TYN L++GLC+ +   +A  L   
Sbjct: 348 ITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRR 407

Query: 429 LEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGK 488
           +  N        +N L+DG CK G+L+ A+ +F+ +   GL P   T++ +I GLC+ G+
Sbjct: 408 VVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGR 467

Query: 489 LEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTF 548
           LE+AN  L  M K G + + VTF  L+ G  +  K   V  L   M E     +    TF
Sbjct: 468 LEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVE--NRCLTTAHTF 525

Query: 549 SIVVDLLAKDEKYHECSAV 567
           +  +D L KD K +E +A+
Sbjct: 526 NCFLDALGKDYKLNEANAM 544



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 140/572 (24%), Positives = 243/572 (42%), Gaps = 113/572 (19%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCF------------ 120
           P + ++ +L   + +    +     +RK++  GL P  +T N LIN +            
Sbjct: 310 PNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQL 369

Query: 121 ------GNKE----------RGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCR 164
                 GN +           GLC  ++  +A  L + ++  G+ PD +TY  L++GFC+
Sbjct: 370 LSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCK 429

Query: 165 TGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGI 224
            G L++A  +   M S   E       + F+++ +ID LCK G +++A  +   M  +GI
Sbjct: 430 EGQLNMAFNIFNSMNSAGLE------PDGFTFTALIDGLCKLGRLEQANGILGSMVKKGI 483

Query: 225 NPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANG 284
           +   V  T LI G C  G  ++V  LF  M++        TFN  +D L K  K+NEAN 
Sbjct: 484 SLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANA 543

Query: 285 LL-----------------------------------ELMIQRGLNPDRFTYNSLMDGYC 309
           +L                                   E M Q G +P+ +TY  +++G C
Sbjct: 544 MLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLC 603

Query: 310 LVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVI 369
             GR++ A  I  SM S G      +Y +L+  + K   ++ A  +   ++ NG +    
Sbjct: 604 NNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSH 663

Query: 370 TYNTLLSGLFQAGQAGYAQKL-----FDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVK 424
            Y+ LLSG   +  A  A+ L      D   L + E D             NNC+   V 
Sbjct: 664 IYSALLSGFVLSNTAIGARALSSTGDLDARSLSSEEND-------------NNCLSSHV- 709

Query: 425 LFHMLEMNKF--------EFGI---EIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTV 473
            F +++++          + G+   +++N L+ GLCK GR+  A +L   + + GL P  
Sbjct: 710 -FRLMDVDHALKIRDEIKKCGVPTEDLYNFLVVGLCKEGRIIEADQLTQDMVKHGLFPDK 768

Query: 474 VTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELL-- 531
              SI+ H  C+  K +   +F+  +  N   P+  ++  ++HG     +  +  +L+  
Sbjct: 769 AISSIIEH-YCKTCKYDNCLEFMKLVLDNKFVPSFASYCWVIHGLRNEGRVQEAQKLVSD 827

Query: 532 ---HKMAEPERNLVPDDTTFSIVVDLLAKDEK 560
              H   E E  + P        ++ L K+E+
Sbjct: 828 LVRHTGIEEEVEVTPS-------IEFLMKEEE 852


>gi|302760727|ref|XP_002963786.1| hypothetical protein SELMODRAFT_79843 [Selaginella moellendorffii]
 gi|300169054|gb|EFJ35657.1| hypothetical protein SELMODRAFT_79843 [Selaginella moellendorffii]
          Length = 432

 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 130/400 (32%), Positives = 203/400 (50%), Gaps = 17/400 (4%)

Query: 153 ITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKA 212
           +TY  LI GFC   +L  A  L ++M   D E     + N  + SII+  LC+ G V +A
Sbjct: 26  VTYNVLIRGFCNASDLDAAFSLLREM---DVEG---MQCNDRTTSIILQGLCRCGRVAQA 79

Query: 213 KELF---LEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGP-RPNLLTFNV 268
            E F   LE+      P VV  TTLI+G C  G  +    LF +M+  G  RPN  T+N 
Sbjct: 80  LEHFDASLELAH--AQPDVVSYTTLINGLCKLGRVDAAFDLFRKMVAAGGCRPNAFTYNA 137

Query: 269 MIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKG 328
           ++D LCK  +++ A  ++    +R   PD  TYN+LM     +GR+D A   F  M  +G
Sbjct: 138 LVDGLCKQDRLDAARAVITEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEG 197

Query: 329 CKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQ 388
              T+VS+N +I G C+   + +A+ ++ ++I       ++TY+ ++ GL ++ Q   AQ
Sbjct: 198 YVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQ 257

Query: 389 KLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGL 448
           +L D M      PDL  Y  L+ G      +  A+ L   +        +  +  +ID L
Sbjct: 258 QLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKL 317

Query: 449 CKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNV 508
           CK GR+D+A E+F +L      P VVTYS +I G CR  ++++       M +  C PNV
Sbjct: 318 CKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRVDEGGKV---MREMACRPNV 374

Query: 509 VTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTF 548
           VT+NT++ G    ++  +   +  +M+E     VPD  T+
Sbjct: 375 VTYNTMIWGLSMVDRNEEAYGMFREMSEC--GFVPDARTY 412



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 108/374 (28%), Positives = 204/374 (54%), Gaps = 9/374 (2%)

Query: 164 RTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRG 223
           R G+ + AL+L +       EN      +  +Y+++I   C    +D A  L  EM   G
Sbjct: 3   RAGSHNQALQLFR-------ENPCQLPASSVTYNVLIRGFCNASDLDAAFSLLREMDVEG 55

Query: 224 INPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLG-PRPNLLTFNVMIDCLCKGGKINEA 282
           +       + ++ G C  G   +    F   L+L   +P+++++  +I+ LCK G+++ A
Sbjct: 56  MQCNDRTTSIILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDAA 115

Query: 283 NGLLELMIQRG-LNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILIN 341
             L   M+  G   P+ FTYN+L+DG C   R+D AR +      +     VV+YN L+ 
Sbjct: 116 FDLFRKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVITEARKRDFAPDVVTYNTLMA 175

Query: 342 GYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEP 401
              ++  V+EA++ + Q+   G   T++++N +++GL +A +   A ++F+EM   +  P
Sbjct: 176 ALFQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHP 235

Query: 402 DLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELF 461
           +L TY+++IDGLCK++ + EA +L   +        +  +  L+ G   AGRLD+A  L 
Sbjct: 236 NLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLL 295

Query: 462 HKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQN 521
            ++  +G +P VVTY+++I  LC+ G+++ A++    +  N C+PNVVT++ L+ G+ + 
Sbjct: 296 RRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRA 355

Query: 522 NKTSKVVELLHKMA 535
           ++  +  +++ +MA
Sbjct: 356 SRVDEGGKVMREMA 369



 Score =  169 bits (427), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 96/296 (32%), Positives = 158/296 (53%), Gaps = 4/296 (1%)

Query: 264 LTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIF-L 322
           +T+NV+I   C    ++ A  LL  M   G+  +  T + ++ G C  GR+  A E F  
Sbjct: 26  VTYNVLIRGFCNASDLDAAFSLLREMDVEGMQCNDRTTSIILQGLCRCGRVAQALEHFDA 85

Query: 323 SMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIIS-NGVRQTVITYNTLLSGLFQA 381
           S+     +  VVSY  LING CK+  V+ A  L+R++++  G R    TYN L+ GL + 
Sbjct: 86  SLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFRKMVAAGGCRPNAFTYNALVDGLCKQ 145

Query: 382 GQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIF 441
            +   A+ +  E +  +  PD+ TYN L+  L +   V EA+  F  +    +   +  F
Sbjct: 146 DRLDAARAVITEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEGYVPTLVSF 205

Query: 442 NCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEK 501
           N +I GLC+A RL +A E+F+++  +   P +VTYS++I GLC+  +L++A   L  M  
Sbjct: 206 NAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVS 265

Query: 502 NGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAK 557
            GC P++V +  L+ GF    +    + LL +M    +  +PD  T+++V+D L K
Sbjct: 266 EGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVS--QGCIPDVVTYTVVIDKLCK 319



 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 95/342 (27%), Positives = 159/342 (46%), Gaps = 40/342 (11%)

Query: 66  MTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIG-LLPDFLTLNILINCFGNKE 124
           + H QP   + S+  L   + K    DA    +RK+V+ G   P+  T N L++    ++
Sbjct: 89  LAHAQPD--VVSYTTLINGLCKLGRVDAAFDLFRKMVAAGGCRPNAFTYNALVDGLCKQD 146

Query: 125 R----------------------------GLCVENRIKEATWLFKNMIAFGVRPDVITYG 156
           R                             L    R+ EA   F  M   G  P ++++ 
Sbjct: 147 RLDAARAVITEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEGYVPTLVSFN 206

Query: 157 TLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELF 216
            +I G CR   L+ AL +  +M+  D+        N+ +YS++ID LCK   +D+A++L 
Sbjct: 207 AIITGLCRARRLADALEVFNEMIDRDFH------PNLVTYSVVIDGLCKSDQLDEAQQLL 260

Query: 217 LEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKG 276
             M   G  P +V  T L+ GF  AG  +   GL   M+  G  P+++T+ V+ID LCK 
Sbjct: 261 DRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKV 320

Query: 277 GKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSY 336
           G++++A+ +   ++    +P+  TY++L+ GYC   R+D   ++   M    C+  VV+Y
Sbjct: 321 GRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRVDEGGKV---MREMACRPNVVTY 377

Query: 337 NILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGL 378
           N +I G   +   EEA  ++R++   G      TY  L   L
Sbjct: 378 NTMIWGLSMVDRNEEAYGMFREMSECGFVPDARTYRGLKRAL 419



 Score =  129 bits (324), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 72/232 (31%), Positives = 129/232 (55%), Gaps = 4/232 (1%)

Query: 334 VSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFD- 392
           V+YN+LI G+C   +++ A SL R++   G++    T + +L GL + G+   A + FD 
Sbjct: 26  VTYNVLIRGFCNASDLDAAFSLLREMDVEGMQCNDRTTSIILQGLCRCGRVAQALEHFDA 85

Query: 393 EMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFH-MLEMNKFEFGIEIFNCLIDGLCKA 451
            ++L + +PD+ +Y  LI+GLCK   V  A  LF  M+           +N L+DGLCK 
Sbjct: 86  SLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFRKMVAAGGCRPNAFTYNALVDGLCKQ 145

Query: 452 GRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTF 511
            RLD A  +  +  ++   P VVTY+ ++  L + G++++A      M + G  P +V+F
Sbjct: 146 DRLDAARAVITEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEGYVPTLVSF 205

Query: 512 NTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
           N ++ G  +  + +  +E+ ++M   +R+  P+  T+S+V+D L K ++  E
Sbjct: 206 NAIITGLCRARRLADALEVFNEMI--DRDFHPNLVTYSVVIDGLCKSDQLDE 255


>gi|297833514|ref|XP_002884639.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297330479|gb|EFH60898.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 864

 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 144/497 (28%), Positives = 241/497 (48%), Gaps = 21/497 (4%)

Query: 62  FFGYMTHMQPSPP-----ISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNIL 116
           F  Y+T+ +         +  +  +  A+ KN + +A   F  K++ +G L D   +  L
Sbjct: 177 FLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMCKILKVGFLLDSHIVTSL 236

Query: 117 INCFGNKERGLCVENRIKEATWLFKNMIAFGV-RPDVITYGTLINGFCRTGNLSVALRLH 175
           +        G C    +++A  +F  M   G   P+ ++Y  LI+G C  G L  A  L 
Sbjct: 237 L-------LGFCRGLNLRDALKVFDLMSREGTCAPNSVSYSILIHGLCEVGRLEEAFGLK 289

Query: 176 KKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLI 235
            +M     E G    T   +Y+++I +LC  GL+DKA  LF EM  RG  P V   T LI
Sbjct: 290 DQM----GEKGCQPSTR--TYTVLIKALCDRGLIDKAFNLFDEMIARGCKPNVHTYTVLI 343

Query: 236 HGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLN 295
            G C  G  EE NG+  +M+  G  P+++T+N +I+  CK G++  A  LL +M +R   
Sbjct: 344 DGLCRDGKIEEANGVCRKMVKDGIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACK 403

Query: 296 PDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSL 355
           P+  T+N LM+G C VG+   A  +   M   G    +VSYN+LI+G C+  ++  A  L
Sbjct: 404 PNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNVAYKL 463

Query: 356 YRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCK 415
              + S  +    +T+  +++   + G+A  A      M    +  D  T   LIDG+C 
Sbjct: 464 LTSMNSFDLEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCN 523

Query: 416 NNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVT 475
               ++A+ +   L   +        N ++D L K  +L     +  K+ + GLVP+VVT
Sbjct: 524 VGKTRDALFILETLVKMRMLTTPHSLNVILDMLSKGCKLKEELAMLGKINKLGLVPSVVT 583

Query: 476 YSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMA 535
           Y+ ++ GL R G +  +   L  M+ +GC PNV  +  +++G  Q  +  +  +LL  M 
Sbjct: 584 YTTLVDGLIRSGDISGSFRMLELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQ 643

Query: 536 EPERNLVPDDTTFSIVV 552
           +    + P+  T++++V
Sbjct: 644 DS--GVSPNHVTYTVMV 658



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 119/429 (27%), Positives = 221/429 (51%), Gaps = 13/429 (3%)

Query: 108 PDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGN 167
           P+ ++ +ILI+       GLC   R++EA  L   M   G +P   TY  LI   C  G 
Sbjct: 264 PNSVSYSILIH-------GLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGL 316

Query: 168 LSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPA 227
           +  A  L  +M++         K N+ +Y+++ID LC++G +++A  +  +M   GI P+
Sbjct: 317 IDKAFNLFDEMIARG------CKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDGIFPS 370

Query: 228 VVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLE 287
           V+    LI+G+C  G       L   M     +PN+ TFN +++ LC+ GK  +A  LL+
Sbjct: 371 VITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLK 430

Query: 288 LMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKIL 347
            M+  GL+PD  +YN L+DG C  G ++ A ++  SM+S   +   +++  +IN +CK  
Sbjct: 431 RMLDNGLSPDIVSYNVLIDGLCREGHMNVAYKLLTSMNSFDLEPDCLTFTAIINAFCKQG 490

Query: 348 NVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYN 407
             + A +    ++  G+    +T  TL+ G+   G+   A  + + +    +     + N
Sbjct: 491 KADVASAFLGLMLRKGISLDEVTGTTLIDGVCNVGKTRDALFILETLVKMRMLTTPHSLN 550

Query: 408 ILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQK 467
           +++D L K   ++E + +   +        +  +  L+DGL ++G +  ++ +   +   
Sbjct: 551 VILDMLSKGCKLKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDISGSFRMLELMKLS 610

Query: 468 GLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKV 527
           G +P V  Y+I+I+GLC+ G++E+A   L  M+ +G +PN VT+  ++ G++ N K  + 
Sbjct: 611 GCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRA 670

Query: 528 VELLHKMAE 536
           +E +  M E
Sbjct: 671 LETVRAMVE 679



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 128/471 (27%), Positives = 230/471 (48%), Gaps = 14/471 (2%)

Query: 54  INLNEARYFFGYMTHMQPSPPIS-SFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLT 112
           +NL +A   F  M+      P S S+++L   + +    +       ++   G  P   T
Sbjct: 244 LNLRDALKVFDLMSREGTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRT 303

Query: 113 LNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVAL 172
             +LI       + LC    I +A  LF  MIA G +P+V TY  LI+G CR G +  A 
Sbjct: 304 YTVLI-------KALCDRGLIDKAFNLFDEMIARGCKPNVHTYTVLIDGLCRDGKIEEAN 356

Query: 173 RLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCT 232
            + +KMV    ++G+    ++ +Y+ +I+  CK+G V  A EL   M+ R   P V    
Sbjct: 357 GVCRKMV----KDGIFP--SVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFN 410

Query: 233 TLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQR 292
            L+ G C  G   +   L   MLD G  P+++++NV+ID LC+ G +N A  LL  M   
Sbjct: 411 ELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNVAYKLLTSMNSF 470

Query: 293 GLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEA 352
            L PD  T+ ++++ +C  G+ D A      M  KG     V+   LI+G C +    +A
Sbjct: 471 DLEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCNVGKTRDA 530

Query: 353 MSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDG 412
           + +   ++   +  T  + N +L  L +  +      +  ++    + P + TY  L+DG
Sbjct: 531 LFILETLVKMRMLTTPHSLNVILDMLSKGCKLKEELAMLGKINKLGLVPSVVTYTTLVDG 590

Query: 413 LCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPT 472
           L ++  +  + ++  +++++     +  +  +I+GLC+ GR++ A +L   +   G+ P 
Sbjct: 591 LIRSGDISGSFRMLELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPN 650

Query: 473 VVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNK 523
            VTY++M+ G    GKL++A + +  M + G   N   +++L+ GF+ + K
Sbjct: 651 HVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLRGFVLSQK 701



 Score =  191 bits (486), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 149/564 (26%), Positives = 270/564 (47%), Gaps = 45/564 (7%)

Query: 11  FSSETVSKVKLSSLFKSPRQIAAVSSPETQLNEFLHENCKSGIINLNEA------RYFFG 64
           FSS+ V+   ++SL KSP      +S    L   +  N  S +I+L  +      R+F  
Sbjct: 35  FSSDQVAAHNVASLLKSPNW--EKNSSLKSLVSHMSPNVASQVISLQRSDNDICVRFFMW 92

Query: 65  YMTH----MQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCF 120
              H      P+       L+  +      +D +++  R+        + L L   I+CF
Sbjct: 93  VCKHSSYCFDPTQKNQLLKLIVSSGLFRVAHDVIVALIRECSRCE--KEMLKL---ISCF 147

Query: 121 GNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVS 180
                     + ++E +         G R +   Y +L+    +     +A   +++M +
Sbjct: 148 ----------DELREVS---------GFRLNYPCYSSLLMSLAKLDLGFLAYVTYRRMEA 188

Query: 181 GDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCC 240
             +  G+I       Y  I+++LCK G  + A+    ++   G      + T+L+ GFC 
Sbjct: 189 DGFVVGMID------YRTIVNALCKNGYTEAAEMFMCKILKVGFLLDSHIVTSLLLGFCR 242

Query: 241 AGNWEEVNGLFIEMLDLGP-RPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRF 299
             N  +   +F  M   G   PN ++++++I  LC+ G++ EA GL + M ++G  P   
Sbjct: 243 GLNLRDALKVFDLMSREGTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTR 302

Query: 300 TYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQI 359
           TY  L+   C  G ID A  +F  M ++GCK  V +Y +LI+G C+   +EEA  + R++
Sbjct: 303 TYTVLIKALCDRGLIDKAFNLFDEMIARGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKM 362

Query: 360 ISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCV 419
           + +G+  +VITYN L++G  + G+   A +L   M+    +P++ T+N L++GLC+    
Sbjct: 363 VKDGIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKP 422

Query: 420 QEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIM 479
            +AV L   +  N     I  +N LIDGLC+ G ++ A++L   +    L P  +T++ +
Sbjct: 423 YKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNVAYKLLTSMNSFDLEPDCLTFTAI 482

Query: 480 IHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPER 539
           I+  C++GK + A+ FL  M + G + + VT  TL+ G     KT   + +L  + +   
Sbjct: 483 INAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCNVGKTRDALFILETLVKMRM 542

Query: 540 NLVPDDTTFSIVVDLLAKDEKYHE 563
              P   + ++++D+L+K  K  E
Sbjct: 543 LTTPH--SLNVILDMLSKGCKLKE 564



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 146/573 (25%), Positives = 241/573 (42%), Gaps = 105/573 (18%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           C  G+I+  +A   F  M      P + ++ +L   + ++   +      RK+V  G+ P
Sbjct: 312 CDRGLID--KAFNLFDEMIARGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDGIFP 369

Query: 109 DFLTLNILINCFGNKER----------------------------GLCVENRIKEATWLF 140
             +T N LIN +    R                            GLC   +  +A  L 
Sbjct: 370 SVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLL 429

Query: 141 KNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIII 200
           K M+  G+ PD+++Y  LI+G CR G+++VA +L   M S D E       +  +++ II
Sbjct: 430 KRMLDNGLSPDIVSYNVLIDGLCREGHMNVAYKLLTSMNSFDLE------PDCLTFTAII 483

Query: 201 DSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPR 260
           ++ CK+G  D A      M  +GI+   V  TTLI G C  G   +   LFI  L+   +
Sbjct: 484 NAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCNVGKTRD--ALFI--LETLVK 539

Query: 261 PNLLT----FNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDT 316
             +LT     NV++D L KG K+ E   +L  + + GL P   TY +L+DG    G I  
Sbjct: 540 MRMLTTPHSLNVILDMLSKGCKLKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDISG 599

Query: 317 AREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLS 376
           +  +   M   GC   V  Y I+ING C+   VEEA  L   +  +GV    +TY  ++ 
Sbjct: 600 SFRMLELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVK 659

Query: 377 GLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNN---------CVQEAVKLFH 427
           G    G+   A +    M     E +   Y+ L+ G   +          C++E + +  
Sbjct: 660 GYVNNGKLDRALETVRAMVERGYELNDRIYSSLLRGFVLSQKGIRETDPECIKELISVVE 719

Query: 428 MLEMNKFEFGIEIFNCLIDGLCKAGRLDNA------------------------------ 457
             ++     G+ IF  L+  LCK GR D +                              
Sbjct: 720 --QLGGSTSGLCIF--LVTRLCKEGRTDESNGLVQTILKSGVFLEKAIDIIMESYCSKKK 775

Query: 458 ----WELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYM-------EKNGCAP 506
                EL   + + G VP+  ++ ++I GL ++G  E+A + ++ +       EK+G  P
Sbjct: 776 HTKCVELITLVLKSGFVPSFKSFCLVIQGLKKEGDTERARELVMELLTSNGVVEKSGVLP 835

Query: 507 NVVTFNTLMHGFLQNNKTSKVVELLHKMAEPER 539
            V          ++    S+V++L+ ++   ER
Sbjct: 836 YV-------ECLMETGDCSEVIDLVDQLHSRER 861



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 60/228 (26%), Positives = 109/228 (47%), Gaps = 7/228 (3%)

Query: 362 NGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQE 421
           +G R     Y++LL  L +      A   +  M+       +  Y  +++ LCKN    E
Sbjct: 154 SGFRLNYPCYSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNG-YTE 212

Query: 422 AVKLFHMLEMNKFEFGIE--IFNCLIDGLCKAGRLDNAWELFHKLPQKGL-VPTVVTYSI 478
           A ++F M ++ K  F ++  I   L+ G C+   L +A ++F  + ++G   P  V+YSI
Sbjct: 213 AAEMF-MCKILKVGFLLDSHIVTSLLLGFCRGLNLRDALKVFDLMSREGTCAPNSVSYSI 271

Query: 479 MIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPE 538
           +IHGLC  G+LE+A      M + GC P+  T+  L+          K   L  +M    
Sbjct: 272 LIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMI--A 329

Query: 539 RNLVPDDTTFSIVVDLLAKDEKYHECSAVSKSSYRACLYVTIFQPSSL 586
           R   P+  T+++++D L +D K  E + V +   +  ++ ++   ++L
Sbjct: 330 RGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDGIFPSVITYNAL 377


>gi|224138176|ref|XP_002326537.1| predicted protein [Populus trichocarpa]
 gi|222833859|gb|EEE72336.1| predicted protein [Populus trichocarpa]
          Length = 826

 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 141/510 (27%), Positives = 249/510 (48%), Gaps = 16/510 (3%)

Query: 51  SGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDF 110
           SG++N     Y   Y  H    P + + N L  A+ + +  +     Y ++V      D 
Sbjct: 147 SGLVNRALELYHIAYDIH-NYLPDVIACNALLNALIQQKKVEIARKVYEEMVKRDGCWDN 205

Query: 111 LTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSV 170
            ++ I++       RGLC E +++E   L  +    G  P+++ Y TL++G+ + G++  
Sbjct: 206 YSVCIMV-------RGLCKERKVEEGRKLINDRWGKGCIPNIVFYNTLVDGYWKRGDVER 258

Query: 171 ALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVV 230
           A  L K++       G +  T   +Y I+I+ LCK+        L +EMK RG++  V V
Sbjct: 259 ANGLFKELKM----KGFLPTTE--TYGIMINGLCKKCNFKAVDGLLVEMKERGVDVNVQV 312

Query: 231 CTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMI 290
             +++      G   EV      + + G  P++ T+N +I   C+ GK++EA  LLE  I
Sbjct: 313 YNSIVDAQIKHGCKIEVGKTLRWITENGCEPDITTYNTLISGSCRDGKVHEAEELLEHAI 372

Query: 291 QRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVE 350
           +RGL+P++ +Y  L+  YC  G+   A ++F+ M  KG    +V+Y  L++G      V+
Sbjct: 373 KRGLSPNKLSYTPLIHVYCKQGKCLRAFDLFIGMTEKGHPLDLVAYGALVHGLVAAGEVD 432

Query: 351 EAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILI 410
            A+++  +++  GV      YN L++GL + G+   A+ L  EM   N+  D      L+
Sbjct: 433 VALTVRDKMVERGVLPDANVYNVLMNGLCKKGRLSAAKLLLVEMLHQNLSLDAFVSATLV 492

Query: 411 DGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLV 470
           DG  ++  + EA KLF +      + G+  +N +I G CK G +++A     ++      
Sbjct: 493 DGFIRHGKLDEAKKLFELTIAKGMDPGVVGYNAMIKGYCKFGMMNDALTCVQRMKDGDHS 552

Query: 471 PTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVEL 530
           P   TYS +I G  ++  L  A      M K  C PNVVT+ +L++GF +   +S+  + 
Sbjct: 553 PDEFTYSTIIDGYVKQNDLHNALKLFGQMVKQKCKPNVVTYTSLINGFCRTGDSSRAEKT 612

Query: 531 LHKMAEPERNLVPDDTTFSIVVDLLAKDEK 560
             +M      L P+  T++I++    K+ K
Sbjct: 613 FEEMRSS--GLKPNVVTYTILIGCFCKEGK 640



 Score =  188 bits (477), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 130/486 (26%), Positives = 235/486 (48%), Gaps = 27/486 (5%)

Query: 65  YMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKE 124
           ++T     P I+++N L     ++             +  GL P+ L+   LI+ +    
Sbjct: 335 WITENGCEPDITTYNTLISGSCRDGKVHEAEELLEHAIKRGLSPNKLSYTPLIHVY---- 390

Query: 125 RGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYE 184
              C + +   A  LF  M   G   D++ YG L++G    G + VAL +  KMV    E
Sbjct: 391 ---CKQGKCLRAFDLFIGMTEKGHPLDLVAYGALVHGLVAAGEVDVALTVRDKMV----E 443

Query: 185 NGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNW 244
            G++   N+  Y+++++ LCK+G +  AK L +EM  + ++    V  TL+ GF   G  
Sbjct: 444 RGVLPDANV--YNVLMNGLCKKGRLSAAKLLLVEMLHQNLSLDAFVSATLVDGFIRHGKL 501

Query: 245 EEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSL 304
           +E   LF   +  G  P ++ +N MI   CK G +N+A   ++ M     +PD FTY+++
Sbjct: 502 DEAKKLFELTIAKGMDPGVVGYNAMIKGYCKFGMMNDALTCVQRMKDGDHSPDEFTYSTI 561

Query: 305 MDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGV 364
           +DGY     +  A ++F  M  + CK  VV+Y  LING+C+  +   A   + ++ S+G+
Sbjct: 562 IDGYVKQNDLHNALKLFGQMVKQKCKPNVVTYTSLINGFCRTGDSSRAEKTFEEMRSSGL 621

Query: 365 RQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKN------NC 418
           +  V+TY  L+    + G+   A   F+ M L    P+  T+N LI+GL  N      N 
Sbjct: 622 KPNVVTYTILIGCFCKEGKISKACSFFELMLLNRCIPNDVTFNYLINGLTNNLATAVSNK 681

Query: 419 VQEAVKLFHMLEMNKF--------EFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLV 470
             E++++   L M+ F        E  +  +N ++  LC    ++ A +L  K+  KG+ 
Sbjct: 682 ANESLEIKASLMMDFFRTMISDGWEQRVAAYNSVLICLCHHKMVNAALQLRDKMTGKGIF 741

Query: 471 PTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVEL 530
           P  V+++ +++GLC +G+ ++  + +            V ++  ++ FL    TS+  ++
Sbjct: 742 PDPVSFAALVYGLCLEGRSKEWKNTISCKLNEWELQIAVKYSQKLNPFLPKGLTSEASKV 801

Query: 531 LHKMAE 536
            H + E
Sbjct: 802 FHTLLE 807



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 129/484 (26%), Positives = 229/484 (47%), Gaps = 18/484 (3%)

Query: 72  SPPISSFNLLFGAVAKNRHYDAVISFYRKLVSI-GLLPDFLTLNILINCFGNKERGLCVE 130
           +P   + + + GA   +   +  +  Y     I   LPD +  N L+N        L  +
Sbjct: 131 APTREALSFVVGAYVDSGLVNRALELYHIAYDIHNYLPDVIACNALLN-------ALIQQ 183

Query: 131 NRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISK 190
            +++ A  +++ M+      D  +   ++ G C+   +       +K+++  +  G I  
Sbjct: 184 KKVEIARKVYEEMVKRDGCWDNYSVCIMVRGLCKERKVEEG----RKLINDRWGKGCIP- 238

Query: 191 TNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGL 250
            NI  Y+ ++D   K G V++A  LF E+K +G  P       +I+G C   N++ V+GL
Sbjct: 239 -NIVFYNTLVDGYWKRGDVERANGLFKELKMKGFLPTTETYGIMINGLCKKCNFKAVDGL 297

Query: 251 FIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCL 310
            +EM + G   N+  +N ++D   K G   E    L  + + G  PD  TYN+L+ G C 
Sbjct: 298 LVEMKERGVDVNVQVYNSIVDAQIKHGCKIEVGKTLRWITENGCEPDITTYNTLISGSCR 357

Query: 311 VGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVIT 370
            G++  A E+      +G     +SY  LI+ YCK      A  L+  +   G    ++ 
Sbjct: 358 DGKVHEAEELLEHAIKRGLSPNKLSYTPLIHVYCKQGKCLRAFDLFIGMTEKGHPLDLVA 417

Query: 371 YNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEA-VKLFHML 429
           Y  L+ GL  AG+   A  + D+M    V PD + YN+L++GLCK   +  A + L  ML
Sbjct: 418 YGALVHGLVAAGEVDVALTVRDKMVERGVLPDANVYNVLMNGLCKKGRLSAAKLLLVEML 477

Query: 430 EMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKL 489
             N       +   L+DG  + G+LD A +LF     KG+ P VV Y+ MI G C+ G +
Sbjct: 478 HQN-LSLDAFVSATLVDGFIRHGKLDEAKKLFELTIAKGMDPGVVGYNAMIKGYCKFGMM 536

Query: 490 EKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFS 549
             A   +  M+    +P+  T++T++ G+++ N     ++L  +M   ++   P+  T++
Sbjct: 537 NDALTCVQRMKDGDHSPDEFTYSTIIDGYVKQNDLHNALKLFGQMV--KQKCKPNVVTYT 594

Query: 550 IVVD 553
            +++
Sbjct: 595 SLIN 598



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 138/526 (26%), Positives = 234/526 (44%), Gaps = 58/526 (11%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNK--------- 123
           P I  +N L     K    +     +++L   G LP   T  I+IN    K         
Sbjct: 238 PNIVFYNTLVDGYWKRGDVERANGLFKELKMKGFLPTTETYGIMINGLCKKCNFKAVDGL 297

Query: 124 -----ERGLCVENRI------------------KEATWLFKNMIAFGVRPDVITYGTLIN 160
                ERG+ V  ++                  K   W+ +N    G  PD+ TY TLI+
Sbjct: 298 LVEMKERGVDVNVQVYNSIVDAQIKHGCKIEVGKTLRWITEN----GCEPDITTYNTLIS 353

Query: 161 GFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMK 220
           G CR G +  A  L +  +    + GL    N  SY+ +I   CK+G   +A +LF+ M 
Sbjct: 354 GSCRDGKVHEAEELLEHAI----KRGL--SPNKLSYTPLIHVYCKQGKCLRAFDLFIGMT 407

Query: 221 GRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKIN 280
            +G    +V    L+HG   AG  +    +  +M++ G  P+   +NV+++ LCK G+++
Sbjct: 408 EKGHPLDLVAYGALVHGLVAAGEVDVALTVRDKMVERGVLPDANVYNVLMNGLCKKGRLS 467

Query: 281 EANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILI 340
            A  LL  M+ + L+ D F   +L+DG+   G++D A+++F    +KG    VV YN +I
Sbjct: 468 AAKLLLVEMLHQNLSLDAFVSATLVDGFIRHGKLDEAKKLFELTIAKGMDPGVVGYNAMI 527

Query: 341 NGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVE 400
            GYCK   + +A++  +++          TY+T++ G  +      A KLF +M     +
Sbjct: 528 KGYCKFGMMNDALTCVQRMKDGDHSPDEFTYSTIIDGYVKQNDLHNALKLFGQMVKQKCK 587

Query: 401 PDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWEL 460
           P++ TY  LI+G C+      A K F  +  +  +  +  +  LI   CK G++  A   
Sbjct: 588 PNVVTYTSLINGFCRTGDSSRAEKTFEEMRSSGLKPNVVTYTILIGCFCKEGKISKACSF 647

Query: 461 FHKLPQKGLVPTVVTYSIMIHGLCRK---GKLEKAN-----------DFLLYMEKNGCAP 506
           F  +     +P  VT++ +I+GL          KAN           DF   M  +G   
Sbjct: 648 FELMLLNRCIPNDVTFNYLINGLTNNLATAVSNKANESLEIKASLMMDFFRTMISDGWEQ 707

Query: 507 NVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVV 552
            V  +N+++     +   +  ++L  KM    + + PD  +F+ +V
Sbjct: 708 RVAAYNSVLICLCHHKMVNAALQLRDKMT--GKGIFPDPVSFAALV 751



 Score =  135 bits (340), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 114/436 (26%), Positives = 187/436 (42%), Gaps = 31/436 (7%)

Query: 44  FLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVS 103
            +H  CK G   L     F G      P   ++   L+ G VA     D  ++   K+V 
Sbjct: 386 LIHVYCKQGKC-LRAFDLFIGMTEKGHPLDLVAYGALVHGLVAAGE-VDVALTVRDKMVE 443

Query: 104 IGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFC 163
            G+LPD    N+L+N       GLC + R+  A  L   M+   +  D     TL++GF 
Sbjct: 444 RGVLPDANVYNVLMN-------GLCKKGRLSAAKLLLVEMLHQNLSLDAFVSATLVDGFI 496

Query: 164 RTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRG 223
           R G L  A +L +  ++   + G++       Y+ +I   CK G+++ A      MK   
Sbjct: 497 RHGKLDEAKKLFELTIAKGMDPGVVG------YNAMIKGYCKFGMMNDALTCVQRMKDGD 550

Query: 224 INPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEAN 283
            +P     +T+I G+    +      LF +M+    +PN++T+  +I+  C+ G  + A 
Sbjct: 551 HSPDEFTYSTIIDGYVKQNDLHNALKLFGQMVKQKCKPNVVTYTSLINGFCRTGDSSRAE 610

Query: 284 GLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGY 343
              E M   GL P+  TY  L+  +C  G+I  A   F  M    C    V++N LING 
Sbjct: 611 KTFEEMRSSGLKPNVVTYTILIGCFCKEGKISKACSFFELMLLNRCIPNDVTFNYLINGL 670

Query: 344 CKILNVEEA--------------MSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQK 389
              L    +              M  +R +IS+G  Q V  YN++L  L        A +
Sbjct: 671 TNNLATAVSNKANESLEIKASLMMDFFRTMISDGWEQRVAAYNSVLICLCHHKMVNAALQ 730

Query: 390 LFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEI-FNCLIDGL 448
           L D+M    + PD  ++  L+ GLC     +E        ++N++E  I + ++  ++  
Sbjct: 731 LRDKMTGKGIFPDPVSFAALVYGLCLEGRSKEWKNTIS-CKLNEWELQIAVKYSQKLNPF 789

Query: 449 CKAGRLDNAWELFHKL 464
              G    A ++FH L
Sbjct: 790 LPKGLTSEASKVFHTL 805



 Score =  108 bits (270), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 83/348 (23%), Positives = 138/348 (39%), Gaps = 73/348 (20%)

Query: 281 EANGLLELMIQRGLNPDR------------------------------------FTYNSL 304
           E   LLE M  + L P R                                       N+L
Sbjct: 117 EVENLLETMKCKDLAPTREALSFVVGAYVDSGLVNRALELYHIAYDIHNYLPDVIACNAL 176

Query: 305 MDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGV 364
           ++      +++ AR+++  M  +       S  I++ G CK   VEE   L       G 
Sbjct: 177 LNALIQQKKVEIARKVYEEMVKRDGCWDNYSVCIMVRGLCKERKVEEGRKLINDRWGKGC 236

Query: 365 RQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLC---------- 414
              ++ YNTL+ G ++ G    A  LF E+K+    P   TY I+I+GLC          
Sbjct: 237 IPNIVFYNTLVDGYWKRGDVERANGLFKELKMKGFLPTTETYGIMINGLCKKCNFKAVDG 296

Query: 415 -------------------------KNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLC 449
                                    K+ C  E  K    +  N  E  I  +N LI G C
Sbjct: 297 LLVEMKERGVDVNVQVYNSIVDAQIKHGCKIEVGKTLRWITENGCEPDITTYNTLISGSC 356

Query: 450 KAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVV 509
           + G++  A EL     ++GL P  ++Y+ +IH  C++GK  +A D  + M + G   ++V
Sbjct: 357 RDGKVHEAEELLEHAIKRGLSPNKLSYTPLIHVYCKQGKCLRAFDLFIGMTEKGHPLDLV 416

Query: 510 TFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAK 557
            +  L+HG +   +    + +  KM   ER ++PD   ++++++ L K
Sbjct: 417 AYGALVHGLVAAGEVDVALTVRDKMV--ERGVLPDANVYNVLMNGLCK 462



 Score = 95.9 bits (237), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 99/397 (24%), Positives = 166/397 (41%), Gaps = 45/397 (11%)

Query: 8   RCLFSSETVSKVKLSSLFKSPRQIAAVSSPETQLNEFLHENCK----------SGII--- 54
           R +     V  V ++ L K  R    +S+ +  L E LH+N             G I   
Sbjct: 444 RGVLPDANVYNVLMNGLCKKGR----LSAAKLLLVEMLHQNLSLDAFVSATLVDGFIRHG 499

Query: 55  NLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLN 114
            L+EA+  F         P +  +N +     K    +  ++  +++      PD  T +
Sbjct: 500 KLDEAKKLFELTIAKGMDPGVVGYNAMIKGYCKFGMMNDALTCVQRMKDGDHSPDEFTYS 559

Query: 115 ILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRL 174
            +I+       G   +N +  A  LF  M+    +P+V+TY +LINGFCRTG+ S A + 
Sbjct: 560 TIID-------GYVKQNDLHNALKLFGQMVKQKCKPNVVTYTSLINGFCRTGDSSRAEKT 612

Query: 175 HKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTL 234
            ++M S    +GL  K N+ +Y+I+I   CKEG + KA   F  M      P  V    L
Sbjct: 613 FEEMRS----SGL--KPNVVTYTILIGCFCKEGKISKACSFFELMLLNRCIPNDVTFNYL 666

Query: 235 IHGFC---------CAGNWEEVNG-----LFIEMLDLGPRPNLLTFNVMIDCLCKGGKIN 280
           I+G            A    E+        F  M+  G    +  +N ++ CLC    +N
Sbjct: 667 INGLTNNLATAVSNKANESLEIKASLMMDFFRTMISDGWEQRVAAYNSVLICLCHHKMVN 726

Query: 281 EANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILI 340
            A  L + M  +G+ PD  ++ +L+ G CL GR    +       ++      V Y+  +
Sbjct: 727 AALQLRDKMTGKGIFPDPVSFAALVYGLCLEGRSKEWKNTISCKLNEWELQIAVKYSQKL 786

Query: 341 NGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSG 377
           N +       EA  ++  ++  GV+  +   N ++S 
Sbjct: 787 NPFLPKGLTSEASKVFHTLLE-GVKLHIQENNLIVSA 822


>gi|302792409|ref|XP_002977970.1| hypothetical protein SELMODRAFT_108199 [Selaginella moellendorffii]
 gi|300153991|gb|EFJ20627.1| hypothetical protein SELMODRAFT_108199 [Selaginella moellendorffii]
          Length = 695

 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 143/466 (30%), Positives = 225/466 (48%), Gaps = 17/466 (3%)

Query: 101 LVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLIN 160
           ++  GL P+ +  N LI+C       LC    + EA    K M      P+V++Y  +I+
Sbjct: 1   MLEAGLFPNAILYNNLISC-------LCKAGMLAEAESYLKRMPQHCA-PNVVSYNIIID 52

Query: 161 GFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMK 220
           G+C+  N+  AL   ++M        L       +YS I+ S CK G V KA ++F EM 
Sbjct: 53  GYCKARNIEKALAFLREM------EELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMP 106

Query: 221 GRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKIN 280
            +G  P +V    L+ G   A    E   LF  M   G +P+++T+N MI  LCK  K++
Sbjct: 107 AKGCEPDIVNFNVLLSGLWRARKIHEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLD 166

Query: 281 EANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILI 340
           EA  LLE M Q  ++P   TY +L+D  C   R+  A E+F  M    C  T  +Y++L 
Sbjct: 167 EAVFLLERMKQEDVSPTFVTYTTLIDHLCKFTRLQQAYEVFEKMAEGPCACTEPAYSVLF 226

Query: 341 NGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQA-GQAGYAQKLFDEMKLYNV 399
           N   +   + EA  +Y  +    V  T  TY+ ++ GL +  G    A KL  EM    +
Sbjct: 227 NKLQRAGKLVEASRVYSDMCRKNVCMTDNTYSLVVLGLSKMDGGNVEAAKLVTEMMGKKI 286

Query: 400 EPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWE 459
            PD   Y+ILI+GLCK     EA ++F  +        +  +N L++GL    +L +A E
Sbjct: 287 APDFYAYSILINGLCKARRPGEAKEMFQEMRGRGISPTVVTYNTLLEGLLSTAKLQDAME 346

Query: 460 LFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFL 519
           L + +  +G +P   +Y++MI G C  G   +A      M K+G   N  T+N ++ GF+
Sbjct: 347 LTYFMLDQGRLPDTCSYNLMIRGFCANGDTNEAYCLFQDMIKDGIVLNTWTYNFMIVGFI 406

Query: 520 QNNKTSKVVELLHKMAEPERNLVPDDT--TFSIVVDLLAKDEKYHE 563
           ++   S    L  +M   + + VP     T+ I++  L K ++  E
Sbjct: 407 KDEAWSSAWMLFKRMQSGKNDKVPAPNMFTYEILISSLCKTDQVEE 452



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 138/513 (26%), Positives = 246/513 (47%), Gaps = 22/513 (4%)

Query: 29  RQIAAVSSPET--QLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVA 86
           R++  +  P T    +  +   CK+G  N+++A   F  M      P I +FN+L   + 
Sbjct: 68  REMEELGHPPTPHAYSSIVQSFCKTG--NVSKAMDVFAEMPAKGCEPDIVNFNVLLSGLW 125

Query: 87  KNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAF 146
           + R        +R + S G  PD +T N +I        GLC   ++ EA +L + M   
Sbjct: 126 RARKIHEARELFRSMNSRGCKPDVVTYNTMIA-------GLCKWKKLDEAVFLLERMKQE 178

Query: 147 GVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKE 206
            V P  +TY TLI+  C+   L  A  + +KM  G             +YS++ + L + 
Sbjct: 179 DVSPTFVTYTTLIDHLCKFTRLQQAYEVFEKMAEGP------CACTEPAYSVLFNKLQRA 232

Query: 207 GLVDKAKELFLEMKGRGINPAVVVCTTLIHGFC-CAGNWEEVNGLFIEMLDLGPRPNLLT 265
           G + +A  ++ +M  + +       + ++ G     G   E   L  EM+     P+   
Sbjct: 233 GKLVEASRVYSDMCRKNVCMTDNTYSLVVLGLSKMDGGNVEAAKLVTEMMGKKIAPDFYA 292

Query: 266 FNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMH 325
           ++++I+ LCK  +  EA  + + M  RG++P   TYN+L++G     ++  A E+   M 
Sbjct: 293 YSILINGLCKARRPGEAKEMFQEMRGRGISPTVVTYNTLLEGLLSTAKLQDAMELTYFML 352

Query: 326 SKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAG 385
            +G      SYN++I G+C   +  EA  L++ +I +G+     TYN ++ G  +     
Sbjct: 353 DQGRLPDTCSYNLMIRGFCANGDTNEAYCLFQDMIKDGIVLNTWTYNFMIVGFIKDEAWS 412

Query: 386 YAQKLFDEMKLYNVE----PDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIF 441
            A  LF  M+    +    P++ TY ILI  LCK + V+EA KL   +    F   ++I+
Sbjct: 413 SAWMLFKRMQSGKNDKVPAPNMFTYEILISSLCKTDQVEEAFKLLSAMRDKGFVPSLKIW 472

Query: 442 NCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEK 501
             L+  L +AGRLD+A+EL+ ++ +      V + +I++ G+ R+G +++A DFL  M  
Sbjct: 473 EVLLSRLARAGRLDDAFELYKEMSRINCQQLVGSSNILLDGILRRGSVDEAKDFLKQMTD 532

Query: 502 NGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKM 534
            G  P+  T++ L+ G     K  +  +L+ ++
Sbjct: 533 TGIVPDKFTYDKLVVGLCWQGKADQARKLVEEL 565



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 136/511 (26%), Positives = 242/511 (47%), Gaps = 36/511 (7%)

Query: 55  NLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLN 114
           N+ +A  F   M  +   P   +++ +  +  K  +    +  + ++ + G  PD +  N
Sbjct: 59  NIEKALAFLREMEELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFN 118

Query: 115 ILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRL 174
           +L++       GL    +I EA  LF++M + G +PDV+TY T+I G C+   L  A+ L
Sbjct: 119 VLLS-------GLWRARKIHEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFL 171

Query: 175 HKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTL 234
            ++M   D     +S T + +Y+ +ID LCK   + +A E+F +M            + L
Sbjct: 172 LERMKQED-----VSPTFV-TYTTLIDHLCKFTRLQQAYEVFEKMAEGPCACTEPAYSVL 225

Query: 235 IHGFCCAGNWEEVNGLFIEMLDLGPRPNLL----TFNVMIDCLCK--GGKINEANGLLEL 288
            +    AG   E + ++ +M     R N+     T+++++  L K  GG + EA  L+  
Sbjct: 226 FNKLQRAGKLVEASRVYSDMC----RKNVCMTDNTYSLVVLGLSKMDGGNV-EAAKLVTE 280

Query: 289 MIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILN 348
           M+ + + PD + Y+ L++G C   R   A+E+F  M  +G   TVV+YN L+ G      
Sbjct: 281 MMGKKIAPDFYAYSILINGLCKARRPGEAKEMFQEMRGRGISPTVVTYNTLLEGLLSTAK 340

Query: 349 VEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNI 408
           +++AM L   ++  G      +YN ++ G    G    A  LF +M    +  +  TYN 
Sbjct: 341 LQDAMELTYFMLDQGRLPDTCSYNLMIRGFCANGDTNEAYCLFQDMIKDGIVLNTWTYNF 400

Query: 409 LIDGLCKNNCVQEAVKLFHMLEMNKFE-------FGIEIFNCLIDGLCKAGRLDNAWELF 461
           +I G  K+     A  LF  ++  K +       F  EI   LI  LCK  +++ A++L 
Sbjct: 401 MIVGFIKDEAWSSAWMLFKRMQSGKNDKVPAPNMFTYEI---LISSLCKTDQVEEAFKLL 457

Query: 462 HKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQN 521
             +  KG VP++  + +++  L R G+L+ A +    M +  C   V + N L+ G L+ 
Sbjct: 458 SAMRDKGFVPSLKIWEVLLSRLARAGRLDDAFELYKEMSRINCQQLVGSSNILLDGILRR 517

Query: 522 NKTSKVVELLHKMAEPERNLVPDDTTFSIVV 552
               +  + L +M +    +VPD  T+  +V
Sbjct: 518 GSVDEAKDFLKQMTDT--GIVPDKFTYDKLV 546



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 108/363 (29%), Positives = 182/363 (50%), Gaps = 14/363 (3%)

Query: 254 MLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGR 313
           ML+ G  PN + +N +I CLCK G + EA   L+ M Q    P+  +YN ++DGYC    
Sbjct: 1   MLEAGLFPNAILYNNLISCLCKAGMLAEAESYLKRMPQH-CAPNVVSYNIIIDGYCKARN 59

Query: 314 IDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNT 373
           I+ A      M   G   T  +Y+ ++  +CK  NV +AM ++ ++ + G    ++ +N 
Sbjct: 60  IEKALAFLREMEELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNV 119

Query: 374 LLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNK 433
           LLSGL++A +   A++LF  M     +PD+ TYN +I GLCK   + EAV L   ++   
Sbjct: 120 LLSGLWRARKIHEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQED 179

Query: 434 FEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKAN 493
                  +  LID LCK  RL  A+E+F K+ +     T   YS++ + L R GKL +A+
Sbjct: 180 VSPTFVTYTTLIDHLCKFTRLQQAYEVFEKMAEGPCACTEPAYSVLFNKLQRAGKLVEAS 239

Query: 494 DFLLYM-EKNGCAPNVVTFNTLMHGFLQ----NNKTSKVV-ELLHKMAEPERNLVPDDTT 547
                M  KN C  +  T++ ++ G  +    N + +K+V E++ K       + PD   
Sbjct: 240 RVYSDMCRKNVCMTD-NTYSLVVLGLSKMDGGNVEAAKLVTEMMGK------KIAPDFYA 292

Query: 548 FSIVVDLLAKDEKYHECSAVSKSSYRACLYVTIFQPSSLGSMIGCTVRLMPQPEMSDTLG 607
           +SI+++ L K  +  E   + +      +  T+   ++L   +  T +L    E++  + 
Sbjct: 293 YSILINGLCKARRPGEAKEMFQEMRGRGISPTVVTYNTLLEGLLSTAKLQDAMELTYFML 352

Query: 608 DDG 610
           D G
Sbjct: 353 DQG 355


>gi|297727505|ref|NP_001176116.1| Os10g0368800 [Oryza sativa Japonica Group]
 gi|20043026|gb|AAM08834.1|AC113335_14 Putative PPR-repeat protein [Oryza sativa Japonica Group]
 gi|22830267|gb|AAN08650.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|31431615|gb|AAP53366.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|255679344|dbj|BAH94844.1| Os10g0368800 [Oryza sativa Japonica Group]
          Length = 913

 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 136/487 (27%), Positives = 225/487 (46%), Gaps = 39/487 (8%)

Query: 58  EARYFFGYMTHMQPSPPIS-SFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNIL 116
           +A   +  M H    PP + +F +   A+ +    D  ++  R +   G +PD +    +
Sbjct: 157 DALALYRRMVHRDRVPPTTFTFGVAARALCRLGRADEALALLRGMARHGCVPDAVLYQTV 216

Query: 117 I----------------------------NCFGNKERGLCVENRIKEATWLFKNMIAFGV 148
           I                            N F +  RG+C   R++EA  L   M+  G 
Sbjct: 217 IHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGC 276

Query: 149 RPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGL 208
            P V+TYG L+ G CR      A    + M+      G + + N+  ++ +I     EG 
Sbjct: 277 MPGVMTYGFLLQGLCRVRQADEA----RAML------GRVPELNVVLFNTVIGGCLAEGK 326

Query: 209 VDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNV 268
           + +A EL+  M  +G  P     + L+HG C  G       L  EM   G  PN++T+ +
Sbjct: 327 LAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTI 386

Query: 269 MIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKG 328
           ++   CK G  ++   LLE M  +GL  +   YN ++   C  GR+D A  +   M S+G
Sbjct: 387 VLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQG 446

Query: 329 CKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQ 388
           C   + SYN +I   C    +EEA  ++  ++  GV    ITYNT++  L + G+   A 
Sbjct: 447 CNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAV 506

Query: 389 KLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGL 448
           +L  EM L+    D+ +YN LI  +CK+  V  ++ L   +     +     +N LI  L
Sbjct: 507 RLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISEL 566

Query: 449 CKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNV 508
           CK  R+ +A EL  ++  +GL P +VTY+ +I+GLC+ G +  A + L  +      P++
Sbjct: 567 CKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDI 626

Query: 509 VTFNTLM 515
           +T+N L+
Sbjct: 627 ITYNILI 633



 Score =  202 bits (513), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 137/521 (26%), Positives = 236/521 (45%), Gaps = 53/521 (10%)

Query: 72  SPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVEN 131
            P   S+N++   +A+   +   ++ YR++V    +P           FG   R LC   
Sbjct: 136 QPSFRSYNVVLSVLARADCHADALALYRRMVHRDRVPP------TTFTFGVAARALCRLG 189

Query: 132 RIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKT 191
           R  EA  L + M   G  PD + Y T+I+  C  G ++ A  L  +M+       +    
Sbjct: 190 RADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLL------MGCAA 243

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
           ++ ++  ++  +C  G V +A  L   M  +G  P V+    L+ G C     +E     
Sbjct: 244 DVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARA-- 301

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
             ML   P  N++ FN +I      GK+ EA  L E M  +G  PD  TY+ LM G C +
Sbjct: 302 --MLGRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKL 359

Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
           GRI +A  +   M  KG    VV+Y I+++ +CK    ++  +L  ++ + G+      Y
Sbjct: 360 GRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGY 419

Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFH---- 427
           N ++  L + G+   A  L  EM+     PD+ +YN +I  LC N  ++EA  +F     
Sbjct: 420 NGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLE 479

Query: 428 ----------------MLEMNKFEFGIEI---------------FNCLIDGLCKAGRLDN 456
                           +L   +++  + +               +N LI  +CK G +D 
Sbjct: 480 EGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDR 539

Query: 457 AWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMH 516
           +  L  ++ +KG+ P  V+Y+I+I  LC++ ++  A +    M   G AP++VT+NTL++
Sbjct: 540 SLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLIN 599

Query: 517 GFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAK 557
           G  +       + LL K+     N+ PD  T++I++    K
Sbjct: 600 GLCKMGWMHAALNLLEKLH--NENVHPDIITYNILISWHCK 638



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 121/456 (26%), Positives = 216/456 (47%), Gaps = 38/456 (8%)

Query: 146 FGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCK 205
           FGV+P   +Y  +++   R    + AL L+++MV  D           F++ +   +LC+
Sbjct: 133 FGVQPSFRSYNVVLSVLARADCHADALALYRRMVHRDR-----VPPTTFTFGVAARALCR 187

Query: 206 EGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLT 265
            G  D+A  L   M   G  P  V+  T+IH  C  G   E   L  EML +G   ++ T
Sbjct: 188 LGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNT 247

Query: 266 FNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAR------- 318
           F+ ++  +C  G++ EA  L++ M+ +G  P   TY  L+ G C V + D AR       
Sbjct: 248 FDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRVP 307

Query: 319 ------------------------EIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMS 354
                                   E++ +M  KGC+    +Y+IL++G CK+  +  A+ 
Sbjct: 308 ELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVR 367

Query: 355 LYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLC 414
           L R++   G    V+TY  +L    + G     + L +EM    +  +   YN +I  LC
Sbjct: 368 LLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALC 427

Query: 415 KNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVV 474
           K+  + EA+ L   +        I  +N +I  LC   +++ A  +F  L ++G+V   +
Sbjct: 428 KDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGI 487

Query: 475 TYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKM 534
           TY+ +IH L R G+ + A      M  +GC+ +VV++N L+    ++    + + LL +M
Sbjct: 488 TYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEM 547

Query: 535 AEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKS 570
           A  E+ + P++ +++I++  L K+ +  +   +SK 
Sbjct: 548 A--EKGIKPNNVSYNILISELCKERRVRDALELSKQ 581



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 124/445 (27%), Positives = 205/445 (46%), Gaps = 30/445 (6%)

Query: 32  AAVSSPETQLNEFLHENCKS-------------GIINLNEARYFFGYMTHMQPSPPISSF 78
             V+   T LNE L   C +             G+  + EA      M      P + ++
Sbjct: 224 GGVTEAATLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTY 283

Query: 79  NLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATW 138
             L   + + R  D   +       +G +P+   LN+++  F     G   E ++ EAT 
Sbjct: 284 GFLLQGLCRVRQADEARAM------LGRVPE---LNVVL--FNTVIGGCLAEGKLAEATE 332

Query: 139 LFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSI 198
           L++ M   G +PD  TY  L++G C+ G +  A+RL ++M    +        N+ +Y+I
Sbjct: 333 LYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGF------APNVVTYTI 386

Query: 199 IIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLG 258
           ++ S CK G+ D  + L  EM  +G+         +I+  C  G  +E  GL  EM   G
Sbjct: 387 VLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQG 446

Query: 259 PRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAR 318
             P++ ++N +I  LC   ++ EA  + E +++ G+  +  TYN+++      GR   A 
Sbjct: 447 CNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAV 506

Query: 319 EIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGL 378
            +   M   GC   VVSYN LI   CK  NV+ ++ L  ++   G++   ++YN L+S L
Sbjct: 507 RLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISEL 566

Query: 379 FQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGI 438
            +  +   A +L  +M    + PD+ TYN LI+GLCK   +  A+ L   L        I
Sbjct: 567 CKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDI 626

Query: 439 EIFNCLIDGLCKAGRLDNAWELFHK 463
             +N LI   CK   LD+A  L ++
Sbjct: 627 ITYNILISWHCKVRLLDDAAMLLNR 651



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 86/318 (27%), Positives = 157/318 (49%), Gaps = 15/318 (4%)

Query: 44  FLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVS 103
            +H  CK G I    A      M     +P + ++ ++  +  KN  +D   +   ++ +
Sbjct: 352 LMHGLCKLGRIG--SAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSA 409

Query: 104 IGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFC 163
            GL  +    N +I         LC + R+ EA  L + M + G  PD+ +Y T+I   C
Sbjct: 410 KGLTLNSQGYNGMIY-------ALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLC 462

Query: 164 RTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRG 223
               +  A  + + ++    E G+++  N  +Y+ II +L ++G    A  L  EM   G
Sbjct: 463 NNEQMEEAEHMFENLL----EEGVVA--NGITYNTIIHALLRDGRWQDAVRLAKEMILHG 516

Query: 224 INPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEAN 283
            +  VV    LI   C  GN +    L  EM + G +PN +++N++I  LCK  ++ +A 
Sbjct: 517 CSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDAL 576

Query: 284 GLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGY 343
            L + M+ +GL PD  TYN+L++G C +G +  A  +   +H++     +++YNILI+ +
Sbjct: 577 ELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILISWH 636

Query: 344 CKILNVEEAMSLYRQIIS 361
           CK+  +++A  L  + ++
Sbjct: 637 CKVRLLDDAAMLLNRAMA 654



 Score = 82.0 bits (201), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 48/185 (25%), Positives = 88/185 (47%), Gaps = 4/185 (2%)

Query: 385 GYAQKLFDEM-KLYNVEPDLSTYNILIDGLCKNNCVQEAVKLF-HMLEMNKFEFGIEIFN 442
           G A  L D++ + + V+P   +YN+++  L + +C  +A+ L+  M+  ++       F 
Sbjct: 120 GRALHLLDQLPRRFGVQPSFRSYNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFG 179

Query: 443 CLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKN 502
                LC+ GR D A  L   + + G VP  V Y  +IH LC +G + +A   L  M   
Sbjct: 180 VAARALCRLGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLM 239

Query: 503 GCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYH 562
           GCA +V TF+ ++ G     +  +   L+ +M    +  +P   T+  ++  L +  +  
Sbjct: 240 GCAADVNTFDDVVRGMCGLGRVREAARLVDRMM--TKGCMPGVMTYGFLLQGLCRVRQAD 297

Query: 563 ECSAV 567
           E  A+
Sbjct: 298 EARAM 302


>gi|357145546|ref|XP_003573680.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Brachypodium distachyon]
          Length = 739

 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 135/417 (32%), Positives = 206/417 (49%), Gaps = 11/417 (2%)

Query: 139 LFKNMIAFGVR---PDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFS 195
           +  +M +F  R    ++ TY TLIN +C  G+L  +    K+ +S     G    ++  +
Sbjct: 56  MLADMESFASRMPARNLRTYTTLINAYCLAGDLPAS----KRHLSSLLRAGFAPDSH--A 109

Query: 196 YSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEML 255
           Y+  +   C+ GL+  A  LF+ M  RG        T L+HG C AG   E   +F  M 
Sbjct: 110 YTSFVVGYCRAGLLAHACRLFVLMPLRGCVRTAFTYTALLHGLCGAGMVREAMSVFAGMQ 169

Query: 256 DLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRID 315
             G  P+   +  M+  LC  G+  EA  LL   +  G  P+   YN+L+DGYC VG ++
Sbjct: 170 ADGCAPDPHVYATMVHGLCGAGRTREAETLLSDAMAEGFEPNVVVYNALIDGYCNVGDLE 229

Query: 316 TAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLL 375
            A ++F  M   GC   V +Y  LI+G+CK   ++ AM L+ +++  G+   V+TY  L+
Sbjct: 230 LAVDVFERMDVNGCSPNVRTYTELISGFCKSRKLDRAMMLFSRMVDAGLVPNVVTYTALI 289

Query: 376 SGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFE 435
            G    GQ   A +L   M+   + P+  T ++LID LCK+  V EA  L   L     +
Sbjct: 290 QGQCSDGQLDCAYRLLQSMENSGLVPNEWTCSVLIDALCKHERVGEAQLLLGSLIQKGIK 349

Query: 436 FGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDF 495
               ++  LIDGLCKAGR   A  L   L  +G VP   TYS +I GLCR+ +L +A   
Sbjct: 350 VNEIVYTSLIDGLCKAGRFAAADRLMQTLVSQGFVPDAHTYSSLIDGLCRQKELSEAMLV 409

Query: 496 LLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVV 552
           L  M + G  P+ VT+  ++   ++        ++L KM      + PD  T++I V
Sbjct: 410 LDDMMEKGVQPSPVTYTIIIDELVREVGADGSKKILDKMIAA--GIKPDVFTYTIFV 464



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 140/531 (26%), Positives = 237/531 (44%), Gaps = 54/531 (10%)

Query: 78  FNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEAT 137
            N    A+A++R    + SF  ++ +  L     T   LIN +       C+   +  + 
Sbjct: 44  LNAFLMALARHRMLADMESFASRMPARNLR----TYTTLINAY-------CLAGDLPASK 92

Query: 138 WLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYS 197
               +++  G  PD   Y + + G+CR G L+ A RL   M       G +     F+Y+
Sbjct: 93  RHLSSLLRAGFAPDSHAYTSFVVGYCRAGLLAHACRLFVLMPL----RGCVRTA--FTYT 146

Query: 198 IIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDL 257
            ++  LC  G+V +A  +F  M+  G  P   V  T++HG C AG   E   L  + +  
Sbjct: 147 ALLHGLCGAGMVREAMSVFAGMQADGCAPDPHVYATMVHGLCGAGRTREAETLLSDAMAE 206

Query: 258 GPRPNLLTFNVMID----------------------C-------------LCKGGKINEA 282
           G  PN++ +N +ID                      C              CK  K++ A
Sbjct: 207 GFEPNVVVYNALIDGYCNVGDLELAVDVFERMDVNGCSPNVRTYTELISGFCKSRKLDRA 266

Query: 283 NGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILING 342
             L   M+  GL P+  TY +L+ G C  G++D A  +  SM + G      + ++LI+ 
Sbjct: 267 MMLFSRMVDAGLVPNVVTYTALIQGQCSDGQLDCAYRLLQSMENSGLVPNEWTCSVLIDA 326

Query: 343 YCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPD 402
            CK   V EA  L   +I  G++   I Y +L+ GL +AG+   A +L   +      PD
Sbjct: 327 LCKHERVGEAQLLLGSLIQKGIKVNEIVYTSLIDGLCKAGRFAAADRLMQTLVSQGFVPD 386

Query: 403 LSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFH 462
             TY+ LIDGLC+   + EA+ +   +     +     +  +ID L +    D + ++  
Sbjct: 387 AHTYSSLIDGLCRQKELSEAMLVLDDMMEKGVQPSPVTYTIIIDELVREVGADGSKKILD 446

Query: 463 KLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNN 522
           K+   G+ P V TY+I +   C +G++E A   +L+M  +G  PN+VT+N L+ G+    
Sbjct: 447 KMIAAGIKPDVFTYTIFVRSYCHEGRMEDAEHMMLHMVDHGVCPNLVTYNALICGYANLG 506

Query: 523 KTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKSSYR 573
            TS+       M        P++ ++++++ LL K E  +   A S S ++
Sbjct: 507 LTSQAFSTFKHMV--ANGCKPNEESYTVLLRLLIKKESSNNIPANSVSIWK 555



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 136/512 (26%), Positives = 239/512 (46%), Gaps = 33/512 (6%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
           P +  +N L          +  +  + ++   G  P+  T   LI+       G C   +
Sbjct: 210 PNVVVYNALIDGYCNVGDLELAVDVFERMDVNGCSPNVRTYTELIS-------GFCKSRK 262

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
           +  A  LF  M+  G+ P+V+TY  LI G C  G L  A RL + M +    +GL+   N
Sbjct: 263 LDRAMMLFSRMVDAGLVPNVVTYTALIQGQCSDGQLDCAYRLLQSMEN----SGLVP--N 316

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
            ++ S++ID+LCK   V +A+ L   +  +GI    +V T+LI G C AG +   + L  
Sbjct: 317 EWTCSVLIDALCKHERVGEAQLLLGSLIQKGIKVNEIVYTSLIDGLCKAGRFAAADRLMQ 376

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
            ++  G  P+  T++ +ID LC+  +++EA  +L+ M+++G+ P   TY  ++D      
Sbjct: 377 TLVSQGFVPDAHTYSSLIDGLCRQKELSEAMLVLDDMMEKGVQPSPVTYTIIIDELVREV 436

Query: 313 RIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYN 372
             D +++I   M + G K  V +Y I +  YC    +E+A  +   ++ +GV   ++TYN
Sbjct: 437 GADGSKKILDKMIAAGIKPDVFTYTIFVRSYCHEGRMEDAEHMMLHMVDHGVCPNLVTYN 496

Query: 373 TLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCK----NNCVQEAVKLFHM 428
            L+ G    G    A   F  M     +P+  +Y +L+  L K    NN    +V ++ +
Sbjct: 497 ALICGYANLGLTSQAFSTFKHMVANGCKPNEESYTVLLRLLIKKESSNNIPANSVSIWKI 556

Query: 429 LEMNKFEFG-------------IEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVT 475
            EM K+  G             I+I+NC +  LC+  RLD A  L  ++    L P+   
Sbjct: 557 AEM-KYLHGLLEEMVKLQLPSEIDIYNCFLTSLCRVDRLDEAKILLIEMQSANLTPSEDV 615

Query: 476 YSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMA 535
           Y+ +I   CR   L +A  F+  M K+G  P + ++  ++    +        ++   M 
Sbjct: 616 YTSIIACCCRLKMLTEALTFVDSMVKSGYIPQLESYRHIISSLCEEGSIQTAKQVFGDML 675

Query: 536 EPERNLVPDDTTFSIVVDLLAKDEKYHECSAV 567
             E N   ++  + I++D L +     ECS++
Sbjct: 676 SKEYNY--EEIAWRILIDGLLQKGYVAECSSL 705



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 115/504 (22%), Positives = 219/504 (43%), Gaps = 31/504 (6%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
            E +   CKS    L+ A   F  M      P + ++  L      +   D      + +
Sbjct: 251 TELISGFCKSR--KLDRAMMLFSRMVDAGLVPNVVTYTALIQGQCSDGQLDCAYRLLQSM 308

Query: 102 VSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLING 161
            + GL+P+  T ++LI+        LC   R+ EA  L  ++I  G++ + I Y +LI+G
Sbjct: 309 ENSGLVPNEWTCSVLID-------ALCKHERVGEAQLLLGSLIQKGIKVNEIVYTSLIDG 361

Query: 162 FCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKG 221
            C+ G  + A RL + +VS     G +   +  +YS +ID LC++  + +A  +  +M  
Sbjct: 362 LCKAGRFAAADRLMQTLVS----QGFVPDAH--TYSSLIDGLCRQKELSEAMLVLDDMME 415

Query: 222 RGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINE 281
           +G+ P+ V  T +I         +    +  +M+  G +P++ T+ + +   C  G++ +
Sbjct: 416 KGVQPSPVTYTIIIDELVREVGADGSKKILDKMIAAGIKPDVFTYTIFVRSYCHEGRMED 475

Query: 282 ANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILIN 341
           A  ++  M+  G+ P+  TYN+L+ GY  +G    A   F  M + GCK    SY +L+ 
Sbjct: 476 AEHMMLHMVDHGVCPNLVTYNALICGYANLGLTSQAFSTFKHMVANGCKPNEESYTVLLR 535

Query: 342 ----------------GYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAG 385
                              KI  ++    L  +++   +   +  YN  L+ L +  +  
Sbjct: 536 LLIKKESSNNIPANSVSIWKIAEMKYLHGLLEEMVKLQLPSEIDIYNCFLTSLCRVDRLD 595

Query: 386 YAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLI 445
            A+ L  EM+  N+ P    Y  +I   C+   + EA+     +  + +   +E +  +I
Sbjct: 596 EAKILLIEMQSANLTPSEDVYTSIIACCCRLKMLTEALTFVDSMVKSGYIPQLESYRHII 655

Query: 446 DGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCA 505
             LC+ G +  A ++F  +  K      + + I+I GL +KG + + +  L  ME+    
Sbjct: 656 SSLCEEGSIQTAKQVFGDMLSKEYNYEEIAWRILIDGLLQKGYVAECSSLLSVMEEKNYR 715

Query: 506 PNVVTFNTLMHGFLQNNKTSKVVE 529
           P+   +  L       N   ++  
Sbjct: 716 PSDALYARLTGKITDANDIQEIAR 739


>gi|125539937|gb|EAY86332.1| hypothetical protein OsI_07707 [Oryza sativa Indica Group]
          Length = 584

 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 125/424 (29%), Positives = 211/424 (49%), Gaps = 16/424 (3%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
           P + ++N +          DA     R      +  D  T + LI       RGLC   R
Sbjct: 126 PDVMAYNAMMAGYCGAGQVDAA---RRWCAERAVERDAYTCDTLI-------RGLCGRGR 175

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
              A  +   M+     PDV+TY  L+   C+      A++L  +M     + G     +
Sbjct: 176 TANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEM----RDKG--CTPD 229

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
           I +Y+++++ +C+EG VD A E    +   G  P  V    ++ G C A  WE+   L  
Sbjct: 230 IVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMG 289

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
           EM   G  PN++TFN++I  LC+ G +  A  +LE + + G +P+  +YN L+  +C   
Sbjct: 290 EMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCSPNSLSYNPLLHAFCKQK 349

Query: 313 RIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYN 372
           ++D A      M S+GC   +VSYN L+   C+   V+ A+ L  Q+   G    +I+YN
Sbjct: 350 KMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYN 409

Query: 373 TLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMN 432
           T++ GL +AG+   A +L +EM    ++PD+ TY+ +  GLC+ + +++A++ F  ++  
Sbjct: 410 TVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDM 469

Query: 433 KFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKA 492
                  ++N +I GLCK     +A +LF  +   G +P   TY+I+I GL  +G +++A
Sbjct: 470 GIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEA 529

Query: 493 NDFL 496
            D L
Sbjct: 530 RDLL 533



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 119/437 (27%), Positives = 214/437 (48%), Gaps = 20/437 (4%)

Query: 99  RKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEAT-WLFKNMIAFGVRPDVITYGT 157
           R L + G  PD +  N ++        G C   ++  A  W  +      V  D  T  T
Sbjct: 119 RVLAACG--PDVMAYNAMMA-------GYCGAGQVDAARRWCAER----AVERDAYTCDT 165

Query: 158 LINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFL 217
           LI G C  G  + AL +  +M+            ++ +Y+I++++ CK     +A +L  
Sbjct: 166 LIRGLCGRGRTANALAVLDEMLRRR------CVPDVVTYTILLEATCKRSGYKQAMKLLD 219

Query: 218 EMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGG 277
           EM+ +G  P +V    +++G C  G  ++       +   G  PN +++N+++  LC   
Sbjct: 220 EMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAE 279

Query: 278 KINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYN 337
           +  +A  L+  M Q+G  P+  T+N L+   C  G ++ A E+   +   GC    +SYN
Sbjct: 280 RWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCSPNSLSYN 339

Query: 338 ILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLY 397
            L++ +CK   +++AM+    ++S G    +++YNTLL+ L ++G+   A +L  ++K  
Sbjct: 340 PLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDK 399

Query: 398 NVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNA 457
              P L +YN +IDGL K    +EA++L + +     +  I  ++ +  GLC+  R+++A
Sbjct: 400 GCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDA 459

Query: 458 WELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHG 517
              F K+   G+ P  V Y+ +I GLC++ +   A D   YM  NGC PN  T+  L+ G
Sbjct: 460 IRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEG 519

Query: 518 FLQNNKTSKVVELLHKM 534
                   +  +LL ++
Sbjct: 520 LAYEGLIKEARDLLDEL 536



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 121/452 (26%), Positives = 213/452 (47%), Gaps = 22/452 (4%)

Query: 121 GNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVS 180
           G++ R L     + EA  L    +    RPD  T   LI     +G  + A R+      
Sbjct: 71  GDRLRSLVRRGELDEALRL----VGSARRPDAGTCAALIKKLSASGRTAEARRVLAA--- 123

Query: 181 GDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCC 240
                      ++ +Y+ ++   C  G VD A+    E   R +      C TLI G C 
Sbjct: 124 --------CGPDVMAYNAMMAGYCGAGQVDAARRWCAE---RAVERDAYTCDTLIRGLCG 172

Query: 241 AGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFT 300
            G       +  EML     P+++T+ ++++  CK     +A  LL+ M  +G  PD  T
Sbjct: 173 RGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVT 232

Query: 301 YNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQII 360
           YN +++G C  GR+D A E   ++ S GC+   VSYNI++ G C     E+A  L  ++ 
Sbjct: 233 YNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMG 292

Query: 361 SNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQ 420
             G    V+T+N L+S L + G    A ++ +++  Y   P+  +YN L+   CK   + 
Sbjct: 293 QKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCSPNSLSYNPLLHAFCKQKKMD 352

Query: 421 EAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMI 480
           +A+    ++        I  +N L+  LC++G +D A EL H+L  KG  P +++Y+ +I
Sbjct: 353 KAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVI 412

Query: 481 HGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERN 540
            GL + GK ++A + L  M   G  P+++T++T+  G  + ++    +    K+   +  
Sbjct: 413 DGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQ--DMG 470

Query: 541 LVPDDTTFSIVVDLLAKDEKYHECSAVSKSSY 572
           + P+   ++ ++  L K  + H  SA+   +Y
Sbjct: 471 IRPNTVLYNAIILGLCKRRETH--SAIDLFAY 500



 Score = 98.6 bits (244), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 75/269 (27%), Positives = 115/269 (42%), Gaps = 26/269 (9%)

Query: 38  ETQLNEFLHENCKSGIINLNEARYFFGYMTHMQP-------------SPPISSFNLLFGA 84
           E  + E   + C   ++  N    F      ++P             SP   S+N L  A
Sbjct: 285 EELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCSPNSLSYNPLLHA 344

Query: 85  VAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMI 144
             K +  D  ++F   +VS G  PD ++ N L+         LC    +  A  L   + 
Sbjct: 345 FCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLT-------ALCRSGEVDVAVELLHQLK 397

Query: 145 AFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLC 204
             G  P +I+Y T+I+G  + G    AL L  +MVS     GL  + +I +YS I   LC
Sbjct: 398 DKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVS----KGL--QPDIITYSTIAAGLC 451

Query: 205 KEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLL 264
           +E  ++ A   F +++  GI P  V+   +I G C          LF  M+  G  PN  
Sbjct: 452 REDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNES 511

Query: 265 TFNVMIDCLCKGGKINEANGLLELMIQRG 293
           T+ ++I+ L   G I EA  LL+ +  RG
Sbjct: 512 TYTILIEGLAYEGLIKEARDLLDELCSRG 540


>gi|302794977|ref|XP_002979252.1| hypothetical protein SELMODRAFT_110457 [Selaginella moellendorffii]
 gi|300153020|gb|EFJ19660.1| hypothetical protein SELMODRAFT_110457 [Selaginella moellendorffii]
          Length = 702

 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 141/490 (28%), Positives = 232/490 (47%), Gaps = 14/490 (2%)

Query: 78  FNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEAT 137
           +  +     K    D       ++   G+  D L  + LI       +GLC + RI EA 
Sbjct: 114 YTTVINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLI-------QGLCRKGRIDEAL 166

Query: 138 WLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYS 197
             FK+M      P+VITY T++NG C+   +  AL L   M    YE     + ++ SYS
Sbjct: 167 EQFKSM-GEECSPNVITYNTVVNGLCKANRIDEALELFDDM-EKRYEASHGCEPDVISYS 224

Query: 198 IIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDL 257
            +ID+LCK   VDKA E F  M+  G  P VV  ++LI G C      E   L + M + 
Sbjct: 225 TVIDALCKAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRPSECLELLLHMKEK 284

Query: 258 GPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTA 317
           G   N++ FN M+  L K  +  +A    E +++ G  P+  TYN  + G C  GR+D A
Sbjct: 285 GFGINIIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGRVDEA 344

Query: 318 REIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSG 377
             I L M        V++Y+ +I+G+CK   +++A  ++ +++ +      +T+ TLL G
Sbjct: 345 YRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHG 404

Query: 378 LFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFG 437
             +  ++  A ++ ++M      P L TYN+L+D +C  + V+ A++++H ++  K +  
Sbjct: 405 FSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPD 464

Query: 438 IEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLL 497
              +  LI  LC+A R+D A E    +    +VP       ++  LC++G++++A   L 
Sbjct: 465 CNTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVLD 524

Query: 498 YMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAK 557
            + + GC P   TF  L+       K     +LL          V D  T+S+ V  + K
Sbjct: 525 NVVEVGCQPLGETFKILVEELYLRKKWEAASKLLRS-----PGFVADAATYSLCVAEICK 579

Query: 558 DEKYHECSAV 567
             K  E   V
Sbjct: 580 AGKPDEAVEV 589



 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 127/422 (30%), Positives = 210/422 (49%), Gaps = 14/422 (3%)

Query: 147 GVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKE 206
           G + +  T   L+N F +      A RL K+      E   +   N   Y+ +I+  CK 
Sbjct: 71  GFQHNAYTCAVLLNAFVKAKRHEEAHRLLKE------ELEPLCFPNEIMYTTVINGFCKA 124

Query: 207 GLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTF 266
           G VD+A EL  EMK RG+   V++ +TLI G C  G  +E    F  M +    PN++T+
Sbjct: 125 GQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSMGE-ECSPNVITY 183

Query: 267 NVMIDCLCKGGKINEANGLLELMIQR-----GLNPDRFTYNSLMDGYCLVGRIDTAREIF 321
           N +++ LCK  +I+EA  L + M +R     G  PD  +Y++++D  C   R+D A E F
Sbjct: 184 NTVVNGLCKANRIDEALELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQRVDKAYEYF 243

Query: 322 LSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQA 381
             M + GC   VV+Y+ LI+G CK+    E + L   +   G    +I +N +L  L++ 
Sbjct: 244 KRMRAVGCAPNVVTYSSLIDGLCKVDRPSECLELLLHMKEKGFGINIIDFNAMLHALWKN 303

Query: 382 GQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIF 441
            +   A + F+ +     +P++ TYN+ + GLCK   V EA ++   +  +K    +  +
Sbjct: 304 DEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGRVDEAYRILLEMVESKVTPDVITY 363

Query: 442 NCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEK 501
           + +IDG CKAGR+D A ++F ++     +P  VT+  ++HG     K  +A      M  
Sbjct: 364 SSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVN 423

Query: 502 NGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKY 561
            G  P + T+N LM      +     +E+ HKM   +R   PD  T++ ++  L +  + 
Sbjct: 424 AGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQ--PDCNTYAPLIQCLCRARRV 481

Query: 562 HE 563
            E
Sbjct: 482 DE 483



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 115/471 (24%), Positives = 206/471 (43%), Gaps = 37/471 (7%)

Query: 72  SPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGN--------- 122
            P + S++ +  A+ K +  D    +++++ ++G  P+ +T + LI+             
Sbjct: 217 EPDVISYSTVIDALCKAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRPSECLE 276

Query: 123 -----KERGLCVE----NRIKEATW----------LFKNMIAFGVRPDVITYGTLINGFC 163
                KE+G  +     N +  A W           F+ ++  G +P+V+TY   ++G C
Sbjct: 277 LLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLC 336

Query: 164 RTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRG 223
           + G +  A R+  +MV            ++ +YS IID  CK G +DKA ++F  M    
Sbjct: 337 KAGRVDEAYRILLEMVESKV------TPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHE 390

Query: 224 INPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEAN 283
             P  V   TL+HGF       E   +  +M++ G  P L T+NV++DC+C    +  A 
Sbjct: 391 CIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVESAL 450

Query: 284 GLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGY 343
            +   M ++   PD  TY  L+   C   R+D A+E    M +          + L+   
Sbjct: 451 EIYHKMKRKKRQPDCNTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHALVEVL 510

Query: 344 CKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDL 403
           CK   V+EA S+   ++  G +    T+  L+  L+   +   A KL   ++      D 
Sbjct: 511 CKQGEVDEACSVLDNVVEVGCQPLGETFKILVEELYLRKKWEAASKL---LRSPGFVADA 567

Query: 404 STYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHK 463
           +TY++ +  +CK     EAV++   + +         +  ++  LC   R+++A   F K
Sbjct: 568 ATYSLCVAEICKAGKPDEAVEVIEQMVLKGVRPDEGTYVAVLRSLCGLDRVESAIAEFEK 627

Query: 464 LPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTL 514
           +  +G  P +VTY+++I   C     ++A      M   G  P   T  TL
Sbjct: 628 MASRGCAPGLVTYTLLIGEACSADMADEAFRIFEAMVAAGFTPQAQTMRTL 678



 Score =  135 bits (340), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 102/416 (24%), Positives = 176/416 (42%), Gaps = 51/416 (12%)

Query: 75  ISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIK 134
           I  FN +  A+ KN   +    F+ +L+  G  P+ +T N+ ++       GLC   R+ 
Sbjct: 290 IIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVH-------GLCKAGRVD 342

Query: 135 EATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVA----------------------- 171
           EA  +   M+   V PDVITY ++I+GFC+ G +  A                       
Sbjct: 343 EAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLL 402

Query: 172 ------------LRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEM 219
                        R+H+ MV+  +  GL +      Y++++D +C    V+ A E++ +M
Sbjct: 403 HGFSEHKKSREAFRVHEDMVNAGFIPGLQT------YNVLMDCVCGADSVESALEIYHKM 456

Query: 220 KGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKI 279
           K +   P       LI   C A   +E       M      PN    + +++ LCK G++
Sbjct: 457 KRKKRQPDCNTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHALVEVLCKQGEV 516

Query: 280 NEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNIL 339
           +EA  +L+ +++ G  P   T+  L++   L  + + A ++   + S G      +Y++ 
Sbjct: 517 DEACSVLDNVVEVGCQPLGETFKILVEELYLRKKWEAASKL---LRSPGFVADAATYSLC 573

Query: 340 INGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNV 399
           +   CK    +EA+ +  Q++  GVR    TY  +L  L    +   A   F++M     
Sbjct: 574 VAEICKAGKPDEAVEVIEQMVLKGVRPDEGTYVAVLRSLCGLDRVESAIAEFEKMASRGC 633

Query: 400 EPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLD 455
            P L TY +LI   C  +   EA ++F  +    F    +    L   L  AG  D
Sbjct: 634 APGLVTYTLLIGEACSADMADEAFRIFEAMVAAGFTPQAQTMRTLSSCLRDAGYQD 689


>gi|242069901|ref|XP_002450227.1| hypothetical protein SORBIDRAFT_05g002210 [Sorghum bicolor]
 gi|241936070|gb|EES09215.1| hypothetical protein SORBIDRAFT_05g002210 [Sorghum bicolor]
          Length = 894

 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 130/442 (29%), Positives = 221/442 (50%), Gaps = 8/442 (1%)

Query: 125 RGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYE 184
           RGLC+E R++E   L +     G  P  + Y  LI+G+CR G++   L     ++ G+ E
Sbjct: 284 RGLCLEGRVEEGRRLIEARWGEGCVPGAVFYNVLIDGYCRRGDVGRGL-----LLLGEME 338

Query: 185 NGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNW 244
              I  T + +Y  II  L ++  + K + L  EMK RG++P V +  T+I+  C   + 
Sbjct: 339 MKGIMPT-VVTYGAIIHWLGRKSDLTKIESLLWEMKERGLSPNVQIYNTVIYALCKCRSA 397

Query: 245 EEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSL 304
            +   +  +M+     P+++TFN +I   C+ G + EA  LL   I+R L P++ +Y  L
Sbjct: 398 SQALAVLNQMVASRFDPDVVTFNTLIAAFCREGDVEEALKLLREAIRRELEPNQLSYTPL 457

Query: 305 MDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGV 364
           + G+C+ G +  A ++ + M  +G    VV+   LI+G      V+EA+ +  ++    V
Sbjct: 458 IHGFCVRGEVMVASDLLVEMIGRGHTPDVVTLGALIHGLVVSGQVDEALMVREKMAERQV 517

Query: 365 RQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVK 424
                 YN L+SGL +      A+ L  EM    V+PD   Y  LIDG  +++ + +A K
Sbjct: 518 MPDANIYNVLISGLCKKRMLSAAKNLLVEMLEQKVQPDKFVYTTLIDGFIRSDKLSDARK 577

Query: 425 LFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLC 484
           +F  +E       I  +N +I G CK+G ++ A      + + G +P   TY+ +I G  
Sbjct: 578 IFEFMEEKGGYRDIVAYNAMIKGYCKSGMMNEAVMCMSSMRKVGCIPDEFTYTTLIDGYA 637

Query: 485 RKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPD 544
           +KG ++ A  FL  M K  C PN+VT+ +L+ G+     T     L   M      L P+
Sbjct: 638 KKGDIKAALRFLCDMMKRRCKPNIVTYASLICGYCNIGNTDSAEVLFASMQ--SEGLFPN 695

Query: 545 DTTFSIVVDLLAKDEKYHECSA 566
              +++++  L K +K  + +A
Sbjct: 696 VVHYTVLIGSLFKKDKAIQAAA 717



 Score =  211 bits (537), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 149/492 (30%), Positives = 231/492 (46%), Gaps = 36/492 (7%)

Query: 36  SPETQL-NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAV 94
           SP  Q+ N  ++  CK    + ++A      M   +  P + +FN L  A  +    +  
Sbjct: 378 SPNVQIYNTVIYALCKCR--SASQALAVLNQMVASRFDPDVVTFNTLIAAFCREGDVEEA 435

Query: 95  ISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVIT 154
           +   R+ +   L P+ L+   LI+       G CV   +  A+ L   MI  G  PDV+T
Sbjct: 436 LKLLREAIRRELEPNQLSYTPLIH-------GFCVRGEVMVASDLLVEMIGRGHTPDVVT 488

Query: 155 YGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKE 214
            G LI+G   +G +  AL + +KM     E  ++   NI  Y+++I  LCK+ ++  AK 
Sbjct: 489 LGALIHGLVVSGQVDEALMVREKMA----ERQVMPDANI--YNVLISGLCKKRMLSAAKN 542

Query: 215 LFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLC 274
           L +EM  + + P   V TTLI GF  +    +   +F  M + G   +++ +N MI   C
Sbjct: 543 LLVEMLEQKVQPDKFVYTTLIDGFIRSDKLSDARKIFEFMEEKGGYRDIVAYNAMIKGYC 602

Query: 275 KGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVV 334
           K G +NEA   +  M + G  PD FTY +L+DGY   G I  A      M  + CK  +V
Sbjct: 603 KSGMMNEAVMCMSSMRKVGCIPDEFTYTTLIDGYAKKGDIKAALRFLCDMMKRRCKPNIV 662

Query: 335 SYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEM 394
           +Y  LI GYC I N + A  L+  + S G+   V+ Y  L+  LF+  +A  A   F+ M
Sbjct: 663 TYASLICGYCNIGNTDSAEVLFASMQSEGLFPNVVHYTVLIGSLFKKDKAIQAAAYFEHM 722

Query: 395 KLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRL 454
            L +  P+ +T + L++GL   NC                 +G+   NC      +A + 
Sbjct: 723 LLNHCSPNDATMHYLVNGL--TNC----------------RYGMINSNC--SDTDQAHKK 762

Query: 455 DNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTL 514
               ++F  L   GL P +  Y+ +I  LCR   L KA +    M   GC P+ VTF +L
Sbjct: 763 SALLDVFKGLISDGLDPRISAYNAIIFSLCRHNMLGKAMELKEKMSNKGCLPDPVTFLSL 822

Query: 515 MHGFLQNNKTSK 526
           ++GF    K+ K
Sbjct: 823 LYGFSSVGKSGK 834



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 113/414 (27%), Positives = 201/414 (48%), Gaps = 13/414 (3%)

Query: 105 GLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCR 164
           G++P  +T   +I+  G K        +I+   W  K     G+ P+V  Y T+I   C+
Sbjct: 341 GIMPTVVTYGAIIHWLGRKSD----LTKIESLLWEMKER---GLSPNVQIYNTVIYALCK 393

Query: 165 TGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGI 224
             + S AL +  +MV+  ++       ++ +++ +I + C+EG V++A +L  E   R +
Sbjct: 394 CRSASQALAVLNQMVASRFD------PDVVTFNTLIAAFCREGDVEEALKLLREAIRREL 447

Query: 225 NPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANG 284
            P  +  T LIHGFC  G     + L +EM+  G  P+++T   +I  L   G+++EA  
Sbjct: 448 EPNQLSYTPLIHGFCVRGEVMVASDLLVEMIGRGHTPDVVTLGALIHGLVVSGQVDEALM 507

Query: 285 LLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYC 344
           + E M +R + PD   YN L+ G C    +  A+ + + M  +  +     Y  LI+G+ 
Sbjct: 508 VREKMAERQVMPDANIYNVLISGLCKKRMLSAAKNLLVEMLEQKVQPDKFVYTTLIDGFI 567

Query: 345 KILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLS 404
           +   + +A  ++  +   G  + ++ YN ++ G  ++G    A      M+     PD  
Sbjct: 568 RSDKLSDARKIFEFMEEKGGYRDIVAYNAMIKGYCKSGMMNEAVMCMSSMRKVGCIPDEF 627

Query: 405 TYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKL 464
           TY  LIDG  K   ++ A++    +   + +  I  +  LI G C  G  D+A  LF  +
Sbjct: 628 TYTTLIDGYAKKGDIKAALRFLCDMMKRRCKPNIVTYASLICGYCNIGNTDSAEVLFASM 687

Query: 465 PQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGF 518
             +GL P VV Y+++I  L +K K  +A  +  +M  N C+PN  T + L++G 
Sbjct: 688 QSEGLFPNVVHYTVLIGSLFKKDKAIQAAAYFEHMLLNHCSPNDATMHYLVNGL 741



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 107/387 (27%), Positives = 182/387 (47%), Gaps = 6/387 (1%)

Query: 171 ALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVV 230
           A RL+ +M++ D E G     + +S  +++  LC EG V++ + L     G G  P  V 
Sbjct: 258 ARRLYGEMLARDREGG----ADDYSTCVMVRGLCLEGRVEEGRRLIEARWGEGCVPGAVF 313

Query: 231 CTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMI 290
              LI G+C  G+      L  EM   G  P ++T+  +I  L +   + +   LL  M 
Sbjct: 314 YNVLIDGYCRRGDVGRGLLLLGEMEMKGIMPTVVTYGAIIHWLGRKSDLTKIESLLWEMK 373

Query: 291 QRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVE 350
           +RGL+P+   YN+++   C       A  +   M +      VV++N LI  +C+  +VE
Sbjct: 374 ERGLSPNVQIYNTVIYALCKCRSASQALAVLNQMVASRFDPDVVTFNTLIAAFCREGDVE 433

Query: 351 EAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILI 410
           EA+ L R+ I   +    ++Y  L+ G    G+   A  L  EM      PD+ T   LI
Sbjct: 434 EALKLLREAIRRELEPNQLSYTPLIHGFCVRGEVMVASDLLVEMIGRGHTPDVVTLGALI 493

Query: 411 DGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLV 470
            GL  +  V EA+ +   +   +      I+N LI GLCK   L  A  L  ++ ++ + 
Sbjct: 494 HGLVVSGQVDEALMVREKMAERQVMPDANIYNVLISGLCKKRMLSAAKNLLVEMLEQKVQ 553

Query: 471 PTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVEL 530
           P    Y+ +I G  R  KL  A     +ME+ G   ++V +N ++ G+ ++   ++ V  
Sbjct: 554 PDKFVYTTLIDGFIRSDKLSDARKIFEFMEEKGGYRDIVAYNAMIKGYCKSGMMNEAVMC 613

Query: 531 LHKMAEPERNLVPDDTTFSIVVDLLAK 557
           +  M +     +PD+ T++ ++D  AK
Sbjct: 614 MSSMRKV--GCIPDEFTYTTLIDGYAK 638


>gi|356499433|ref|XP_003518545.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Glycine max]
          Length = 905

 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 127/457 (27%), Positives = 237/457 (51%), Gaps = 15/457 (3%)

Query: 69  MQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLC 128
           M  +P ++S+N+L   + K    +A +     +   GL P+ +T+NI+I+        LC
Sbjct: 405 MDAAPNLTSYNILIDMLCKAGELEAALKVQDSMKEAGLFPNIITVNIMID-------RLC 457

Query: 129 VENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMV-SGDYENGL 187
              R+ EA  +F  +      PD +T+ +LI+G  R G ++ A  L++KM+ SG   N +
Sbjct: 458 KAQRLDEACSIFLGLDHKVCTPDSVTFCSLIDGLGRHGKVNDAYMLYEKMLDSGQTPNAV 517

Query: 188 ISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEV 247
           +       Y+ +I +  K G  +   +++ EM  RG +P +++    +     AG  E+ 
Sbjct: 518 V-------YTSLIRNFFKCGRKEDGHKIYKEMMHRGCSPDLMLLNNYMDCVFKAGEIEKG 570

Query: 248 NGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDG 307
             LF E+   G  P++ +++++I  L KGG   +   L   M ++GL+ D   YN ++DG
Sbjct: 571 RALFEEIKAQGLTPDVRSYSILIHGLVKGGFSKDTYKLFYEMKEQGLHLDTRAYNIVIDG 630

Query: 308 YCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQT 367
           +C  G+++ A ++   M +KG + TVV+Y  +I+G  KI  ++EA  L+ +  S  V   
Sbjct: 631 FCKSGKVNKAYQLLEEMKTKGLQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKAVDLN 690

Query: 368 VITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFH 427
           V+ Y++L+ G  + G+   A  + +E+    + P+  T+N L+D L K   + EA+  F 
Sbjct: 691 VVVYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNTYTWNCLLDALVKAEEIDEALVCFQ 750

Query: 428 MLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKG 487
            ++  K       ++ +++GLCK  + + A+  + ++ ++GL P  +TY+ MI GL R G
Sbjct: 751 NMKNLKCPPNEVTYSIMVNGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTTMISGLARVG 810

Query: 488 KLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKT 524
            + +A D     + +G  P+   +N ++ G    NK 
Sbjct: 811 NVLEAKDLFERFKSSGGIPDSACYNAMIEGLSNANKA 847



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 144/543 (26%), Positives = 251/543 (46%), Gaps = 57/543 (10%)

Query: 56  LNEARYFFGYMTHMQPSPPISSFNLL---FGAVAKNRHYDAVISFYRKLVSIGLLPDFLT 112
           ++EA   F  +   +  P + ++N +   +G+V K   ++   S   +    G +P  + 
Sbjct: 323 VDEAVELFEELDSNKSVPCVYAYNTMIMGYGSVGK---FNEAYSLLERQKRKGCIPSVIA 379

Query: 113 LNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVAL 172
            N ++ C G K        +++EA  + + M      P++ +Y  LI+  C+ G L  AL
Sbjct: 380 YNCILTCLGRK-------GKVEEALRILEAM-KMDAAPNLTSYNILIDMLCKAGELEAAL 431

Query: 173 RLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCT 232
           ++   M     E GL    NI + +I+ID LCK   +D+A  +FL +  +   P  V   
Sbjct: 432 KVQDSM----KEAGLFP--NIITVNIMIDRLCKAQRLDEACSIFLGLDHKVCTPDSVTFC 485

Query: 233 TLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQR 292
           +LI G    G   +   L+ +MLD G  PN + +  +I    K G+  + + + + M+ R
Sbjct: 486 SLIDGLGRHGKVNDAYMLYEKMLDSGQTPNAVVYTSLIRNFFKCGRKEDGHKIYKEMMHR 545

Query: 293 GLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEA 352
           G +PD    N+ MD     G I+  R +F  + ++G    V SY+ILI+G  K    ++ 
Sbjct: 546 GCSPDLMLLNNYMDCVFKAGEIEKGRALFEEIKAQGLTPDVRSYSILIHGLVKGGFSKDT 605

Query: 353 MSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDG 412
             L+ ++   G+      YN ++ G  ++G+   A +L +EMK   ++P + TY  +IDG
Sbjct: 606 YKLFYEMKEQGLHLDTRAYNIVIDGFCKSGKVNKAYQLLEEMKTKGLQPTVVTYGSVIDG 665

Query: 413 LCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPT 472
           L K + + EA  LF   +    +  + +++ LIDG  K GR+D A+ +  +L QKGL P 
Sbjct: 666 LAKIDRLDEAYMLFEEAKSKAVDLNVVVYSSLIDGFGKVGRIDEAYLILEELMQKGLTPN 725

Query: 473 V-----------------------------------VTYSIMIHGLCRKGKLEKANDFLL 497
                                               VTYSIM++GLC+  K  KA  F  
Sbjct: 726 TYTWNCLLDALVKAEEIDEALVCFQNMKNLKCPPNEVTYSIMVNGLCKVRKFNKAFVFWQ 785

Query: 498 YMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAK 557
            M+K G  PN +T+ T++ G  +     +  +L  +        +PD   ++ +++ L+ 
Sbjct: 786 EMQKQGLKPNTITYTTMISGLARVGNVLEAKDLFERFKSS--GGIPDSACYNAMIEGLSN 843

Query: 558 DEK 560
             K
Sbjct: 844 ANK 846



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 141/484 (29%), Positives = 245/484 (50%), Gaps = 23/484 (4%)

Query: 82  FGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFK 141
           FG V K    D    F+ +L S GL+PD +T   +I         LC   R+ EA  LF+
Sbjct: 282 FGKVGK---VDMAWKFFHELKSQGLVPDDVTFTSMIGV-------LCKAERVDEAVELFE 331

Query: 142 NMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIID 201
            + +    P V  Y T+I G+   G  + A  L ++        G I   ++ +Y+ I+ 
Sbjct: 332 ELDSNKSVPCVYAYNTMIMGYGSVGKFNEAYSLLER----QKRKGCIP--SVIAYNCILT 385

Query: 202 SLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRP 261
            L ++G V++A  +   MK     P +     LI   C AG  E    +   M + G  P
Sbjct: 386 CLGRKGKVEEALRILEAMKMDAA-PNLTSYNILIDMLCKAGELEAALKVQDSMKEAGLFP 444

Query: 262 NLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIF 321
           N++T N+MID LCK  +++EA  +   +  +   PD  T+ SL+DG    G+++ A  ++
Sbjct: 445 NIITVNIMIDRLCKAQRLDEACSIFLGLDHKVCTPDSVTFCSLIDGLGRHGKVNDAYMLY 504

Query: 322 LSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQA 381
             M   G     V Y  LI  + K    E+   +Y++++  G    ++  N  +  +F+A
Sbjct: 505 EKMLDSGQTPNAVVYTSLIRNFFKCGRKEDGHKIYKEMMHRGCSPDLMLLNNYMDCVFKA 564

Query: 382 GQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIF 441
           G+    + LF+E+K   + PD+ +Y+ILI GL K    ++  KLF+ ++          +
Sbjct: 565 GEIEKGRALFEEIKAQGLTPDVRSYSILIHGLVKGGFSKDTYKLFYEMKEQGLHLDTRAY 624

Query: 442 NCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEK 501
           N +IDG CK+G+++ A++L  ++  KGL PTVVTY  +I GL +  +L++A  ++L+ E 
Sbjct: 625 NIVIDGFCKSGKVNKAYQLLEEMKTKGLQPTVVTYGSVIDGLAKIDRLDEA--YMLFEEA 682

Query: 502 NGCAP--NVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDE 559
              A   NVV +++L+ GF +  +  +   +L ++   ++ L P+  T++ ++D L K E
Sbjct: 683 KSKAVDLNVVVYSSLIDGFGKVGRIDEAYLILEELM--QKGLTPNTYTWNCLLDALVKAE 740

Query: 560 KYHE 563
           +  E
Sbjct: 741 EIDE 744



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 137/549 (24%), Positives = 251/549 (45%), Gaps = 19/549 (3%)

Query: 51  SGIINLNEARYFFGYMTHMQP---SPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLL 107
           +  +   + R  FG +  M+     P  S++  L GA++     D +++  R++  IG  
Sbjct: 175 ASFVKSRKLREAFGVIETMRKFKFRPAYSAYTTLIGALSAAHEADPMLTLLRQMQEIGYE 234

Query: 108 PDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGN 167
                   LI  F         E R+  A  L   M +     D++ Y   I+ F + G 
Sbjct: 235 VTVHLFTTLICVFAR-------EGRVDAALSLLDEMKSNSFNADLVLYNVCIDCFGKVGK 287

Query: 168 LSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPA 227
           + +A +   ++ S     GL+   +  +++ +I  LCK   VD+A ELF E+      P 
Sbjct: 288 VDMAWKFFHELKS----QGLVP--DDVTFTSMIGVLCKAERVDEAVELFEELDSNKSVPC 341

Query: 228 VVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLE 287
           V    T+I G+   G + E   L       G  P+++ +N ++ CL + GK+ EA  +LE
Sbjct: 342 VYAYNTMIMGYGSVGKFNEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRILE 401

Query: 288 LMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKIL 347
            M +    P+  +YN L+D  C  G ++ A ++  SM   G    +++ NI+I+  CK  
Sbjct: 402 AM-KMDAAPNLTSYNILIDMLCKAGELEAALKVQDSMKEAGLFPNIITVNIMIDRLCKAQ 460

Query: 348 NVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYN 407
            ++EA S++  +         +T+ +L+ GL + G+   A  L+++M      P+   Y 
Sbjct: 461 RLDEACSIFLGLDHKVCTPDSVTFCSLIDGLGRHGKVNDAYMLYEKMLDSGQTPNAVVYT 520

Query: 408 ILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQK 467
            LI    K    ++  K++  +        + + N  +D + KAG ++    LF ++  +
Sbjct: 521 SLIRNFFKCGRKEDGHKIYKEMMHRGCSPDLMLLNNYMDCVFKAGEIEKGRALFEEIKAQ 580

Query: 468 GLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKV 527
           GL P V +YSI+IHGL + G  +        M++ G   +   +N ++ GF ++ K +K 
Sbjct: 581 GLTPDVRSYSILIHGLVKGGFSKDTYKLFYEMKEQGLHLDTRAYNIVIDGFCKSGKVNKA 640

Query: 528 VELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKSSYRACLYVTIFQPSSLG 587
            +LL +M    + L P   T+  V+D LAK ++  E   + + +    + + +   SSL 
Sbjct: 641 YQLLEEM--KTKGLQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKAVDLNVVVYSSLI 698

Query: 588 SMIGCTVRL 596
              G   R+
Sbjct: 699 DGFGKVGRI 707



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 140/549 (25%), Positives = 240/549 (43%), Gaps = 32/549 (5%)

Query: 32  AAVSSPETQLNEFLHENCKSGII----NLNEARYFFGYM---THMQPSPPISSFNLLFGA 84
           AA+       +E        G+I    ++  A ++F ++   T    SP   ++N L   
Sbjct: 84  AALEDALNTFDEMPQPELVVGVIRRLKDVRVALHYFRWVERKTKQLHSP--EAYNALLML 141

Query: 85  VAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMI 144
           +A+ R+ + +     ++   G  P   T   ++  F           +++EA  + + M 
Sbjct: 142 MARTRNLEYLEQILEEMSMAGFGPSNNTCIEMVASFVK-------SRKLREAFGVIETMR 194

Query: 145 AFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLC 204
            F  RP    Y TLI            L L ++M    YE        +  ++ +I    
Sbjct: 195 KFKFRPAYSAYTTLIGALSAAHEADPMLTLLRQMQEIGYE------VTVHLFTTLICVFA 248

Query: 205 KEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLL 264
           +EG VD A  L  EMK    N  +V+    I  F   G  +     F E+   G  P+ +
Sbjct: 249 REGRVDAALSLLDEMKSNSFNADLVLYNVCIDCFGKVGKVDMAWKFFHELKSQGLVPDDV 308

Query: 265 TFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSM 324
           TF  MI  LCK  +++EA  L E +      P  + YN+++ GY  VG+ + A  +    
Sbjct: 309 TFTSMIGVLCKAERVDEAVELFEELDSNKSVPCVYAYNTMIMGYGSVGKFNEAYSLLERQ 368

Query: 325 HSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQA 384
             KGC  +V++YN ++    +   VEEA+ +   +  +     + +YN L+  L +AG+ 
Sbjct: 369 KRKGCIPSVIAYNCILTCLGRKGKVEEALRILEAMKMDAA-PNLTSYNILIDMLCKAGEL 427

Query: 385 GYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCL 444
             A K+ D MK   + P++ T NI+ID LCK   + EA  +F  L+          F  L
Sbjct: 428 EAALKVQDSMKEAGLFPNIITVNIMIDRLCKAQRLDEACSIFLGLDHKVCTPDSVTFCSL 487

Query: 445 IDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGC 504
           IDGL + G++++A+ L+ K+   G  P  V Y+ +I    + G+ E  +     M   GC
Sbjct: 488 IDGLGRHGKVNDAYMLYEKMLDSGQTPNAVVYTSLIRNFFKCGRKEDGHKIYKEMMHRGC 547

Query: 505 APNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHEC 564
           +P+++  N  M    +  +  K   L  ++    + L PD  ++SI++  L K       
Sbjct: 548 SPDLMLLNNYMDCVFKAGEIEKGRALFEEI--KAQGLTPDVRSYSILIHGLVK------- 598

Query: 565 SAVSKSSYR 573
              SK +Y+
Sbjct: 599 GGFSKDTYK 607



 Score =  149 bits (375), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 104/361 (28%), Positives = 177/361 (49%), Gaps = 13/361 (3%)

Query: 63  FGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGN 122
           +  M H   SP +   N     V K    +   + + ++ + GL PD  + +ILI+    
Sbjct: 539 YKEMMHRGCSPDLMLLNNYMDCVFKAGEIEKGRALFEEIKAQGLTPDVRSYSILIH---- 594

Query: 123 KERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGD 182
              GL      K+   LF  M   G+  D   Y  +I+GFC++G ++ A +L ++M +  
Sbjct: 595 ---GLVKGGFSKDTYKLFYEMKEQGLHLDTRAYNIVIDGFCKSGKVNKAYQLLEEMKT-- 649

Query: 183 YENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAG 242
              GL  +  + +Y  +ID L K   +D+A  LF E K + ++  VVV ++LI GF   G
Sbjct: 650 --KGL--QPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKAVDLNVVVYSSLIDGFGKVG 705

Query: 243 NWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYN 302
             +E   +  E++  G  PN  T+N ++D L K  +I+EA    + M      P+  TY+
Sbjct: 706 RIDEAYLILEELMQKGLTPNTYTWNCLLDALVKAEEIDEALVCFQNMKNLKCPPNEVTYS 765

Query: 303 SLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISN 362
            +++G C V + + A   +  M  +G K   ++Y  +I+G  ++ NV EA  L+ +  S+
Sbjct: 766 IMVNGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTTMISGLARVGNVLEAKDLFERFKSS 825

Query: 363 GVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEA 422
           G       YN ++ GL  A +A  A  LF+E +L        T  +L+D L K +C+++A
Sbjct: 826 GGIPDSACYNAMIEGLSNANKAMDAYILFEETRLKGCRIYSKTCVVLLDALHKADCLEQA 885

Query: 423 V 423
            
Sbjct: 886 A 886



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 94/334 (28%), Positives = 157/334 (47%), Gaps = 4/334 (1%)

Query: 243 NWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYN 302
           N E +  +  EM   G  P+  T   M+    K  K+ EA G++E M +    P    Y 
Sbjct: 147 NLEYLEQILEEMSMAGFGPSNNTCIEMVASFVKSRKLREAFGVIETMRKFKFRPAYSAYT 206

Query: 303 SLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISN 362
           +L+         D    +   M   G + TV  +  LI  + +   V+ A+SL  ++ SN
Sbjct: 207 TLIGALSAAHEADPMLTLLRQMQEIGYEVTVHLFTTLICVFAREGRVDAALSLLDEMKSN 266

Query: 363 GVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEA 422
                ++ YN  +    + G+   A K F E+K   + PD  T+  +I  LCK   V EA
Sbjct: 267 SFNADLVLYNVCIDCFGKVGKVDMAWKFFHELKSQGLVPDDVTFTSMIGVLCKAERVDEA 326

Query: 423 VKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHG 482
           V+LF  L+ NK    +  +N +I G    G+ + A+ L  +  +KG +P+V+ Y+ ++  
Sbjct: 327 VELFEELDSNKSVPCVYAYNTMIMGYGSVGKFNEAYSLLERQKRKGCIPSVIAYNCILTC 386

Query: 483 LCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLV 542
           L RKGK+E+A   L  M K   APN+ ++N L+    +  +    +++   M E    L 
Sbjct: 387 LGRKGKVEEALRILEAM-KMDAAPNLTSYNILIDMLCKAGELEAALKVQDSMKEA--GLF 443

Query: 543 PDDTTFSIVVDLLAKDEKYHE-CSAVSKSSYRAC 575
           P+  T +I++D L K ++  E CS      ++ C
Sbjct: 444 PNIITVNIMIDRLCKAQRLDEACSIFLGLDHKVC 477


>gi|147784915|emb|CAN72973.1| hypothetical protein VITISV_019486 [Vitis vinifera]
          Length = 550

 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 143/476 (30%), Positives = 235/476 (49%), Gaps = 21/476 (4%)

Query: 68  HMQPSPPISSF--NLLFGAVAKNRHY-----DAVISFYRKLVSIGLLPDFLTLNILINCF 120
           H    P + SF  ++L      N H      +  + +  +++  GL+P   T N L+   
Sbjct: 68  HELTQPHLDSFPTHVLIHEAIINAHVRSQLPEQALFYXNQMIGRGLVPGSNTFNNLLI-- 125

Query: 121 GNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVS 180
                 L +++   E  W   N     V+ DV ++G +I G C  G L     +  +M  
Sbjct: 126 ------LLIKSNFFEKAWRVFNETKGNVKLDVYSFGIMIKGCCEVGYLDKGFEVLGQM-- 177

Query: 181 GDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCC 240
              E GL    N+  Y+ +ID  CK G +++ K+LF +M    +       T LI+GF  
Sbjct: 178 --EEMGL--SPNVVVYTTLIDGCCKNGDIERGKQLFYKMGELDVVANQYTYTVLINGFFK 233

Query: 241 AGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFT 300
            G  ++   L+ +M   G  PN+ T+N MI   C  GK+N A  L + M +RG+  +  T
Sbjct: 234 MGLKKDGIELYEKMKLTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEMRERGVACNVVT 293

Query: 301 YNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQII 360
           YN+L+ G C   R+  A  +   M   G    ++SYN LI+GYC I N+++A SL+ Q+ 
Sbjct: 294 YNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMK 353

Query: 361 SNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQ 420
           S+G   ++ TYN L++G  +A  +     +  EM+   + P   TY IL+D L +++ ++
Sbjct: 354 SSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTILMDALVRSDNIE 413

Query: 421 EAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMI 480
           +A +++  +E       I I+  LI GLC  G +  A +LF  L +  L P  V Y+ MI
Sbjct: 414 KAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMHLKPNDVIYNTMI 473

Query: 481 HGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAE 536
           +G C++G   +A   L  M +NG  PNV ++N+ +    ++ K ++   LL  M E
Sbjct: 474 YGYCKEGSSYRALRLLKEMGENGMVPNVASYNSTIXILCKDEKWTEAEVLLKDMIE 529



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 130/442 (29%), Positives = 227/442 (51%), Gaps = 10/442 (2%)

Query: 129 VENRIKEATWLFKN-MIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGL 187
           V +++ E    + N MI  G+ P   T+  L+    ++     A R+  +   G+     
Sbjct: 93  VRSQLPEQALFYXNQMIGRGLVPGSNTFNNLLILLIKSNFFEKAWRVFNE-TKGNV---- 147

Query: 188 ISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEV 247
             K +++S+ I+I   C+ G +DK  E+  +M+  G++P VVV TTLI G C  G+ E  
Sbjct: 148 --KLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKNGDIERG 205

Query: 248 NGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDG 307
             LF +M +L    N  T+ V+I+   K G   +   L E M   G+ P+ +TYNS++  
Sbjct: 206 KQLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYNSMICR 265

Query: 308 YCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQT 367
            C  G+++ A E+F  M  +G    VV+YN LI G C+   V EA  L  ++  +G+   
Sbjct: 266 CCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPN 325

Query: 368 VITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFH 427
           +I+YNTL+ G    G    A  LF++MK     P L+TYNILI G  +         +  
Sbjct: 326 LISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVR 385

Query: 428 MLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKG 487
            +E          +  L+D L ++  ++ A++++  + + GLV  +  Y ++IHGLC  G
Sbjct: 386 EMEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVG 445

Query: 488 KLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTT 547
            +++A+     +++    PN V +NT+++G+ +   + + + LL +M E    +VP+  +
Sbjct: 446 DMKEASKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGE--NGMVPNVAS 503

Query: 548 FSIVVDLLAKDEKYHECSAVSK 569
           ++  + +L KDEK+ E   + K
Sbjct: 504 YNSTIXILCKDEKWTEAEVLLK 525



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 121/402 (30%), Positives = 202/402 (50%), Gaps = 6/402 (1%)

Query: 120 FGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMV 179
           FG   +G C    + +   +   M   G+ P+V+ Y TLI+G C+ G++    +L  KM 
Sbjct: 154 FGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKNGDIERGKQLFYKMG 213

Query: 180 SGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFC 239
             D         N ++Y+++I+   K GL     EL+ +MK  GI P V    ++I   C
Sbjct: 214 ELDV------VANQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYNSMICRCC 267

Query: 240 CAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRF 299
             G       LF EM + G   N++T+N +I  LC+  ++ EA  L+  M + GL+P+  
Sbjct: 268 NDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLI 327

Query: 300 TYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQI 359
           +YN+L+DGYC +G +D A  +F  M S G   ++ +YNILI G+ +  N      + R++
Sbjct: 328 SYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREM 387

Query: 360 ISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCV 419
            + G+  + +TY  L+  L ++     A +++  M+   +  D+  Y +LI GLC    +
Sbjct: 388 EARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDM 447

Query: 420 QEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIM 479
           +EA KLF  L+    +    I+N +I G CK G    A  L  ++ + G+VP V +Y+  
Sbjct: 448 KEASKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNST 507

Query: 480 IHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQN 521
           I  LC+  K  +A   L  M + G  P++  +N +      N
Sbjct: 508 IXILCKDEKWTEAEVLLKDMIELGLKPSISIWNMISKARFDN 549



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 115/403 (28%), Positives = 195/403 (48%), Gaps = 20/403 (4%)

Query: 56  LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNI 115
           L++     G M  M  SP +  +  L     KN   +     + K+  + ++ +  T  +
Sbjct: 167 LDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKNGDIERGKQLFYKMGELDVVANQYTYTV 226

Query: 116 LINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLH 175
           LIN F   + GL      K+   L++ M   G+ P+V TY ++I   C  G L+ A  L 
Sbjct: 227 LINGFF--KMGL-----KKDGIELYEKMKLTGIVPNVYTYNSMICRCCNDGKLNNAFELF 279

Query: 176 KKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLI 235
            +M     E G+    N+ +Y+ +I  LC+E  V +A+ L   MK  G++P ++   TLI
Sbjct: 280 DEM----RERGV--ACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISYNTLI 333

Query: 236 HGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLN 295
            G+C  GN ++ + LF +M   G  P+L T+N++I    +         ++  M  RGL+
Sbjct: 334 DGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEARGLS 393

Query: 296 PDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSL 355
           P + TY  LMD       I+ A +I+ SM   G    +  Y +LI+G C + +++EA  L
Sbjct: 394 PSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKL 453

Query: 356 YRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCK 415
           ++ +    ++   + YNT++ G  + G +  A +L  EM    + P++++YN  I  LCK
Sbjct: 454 FKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNSTIXILCK 513

Query: 416 NNCVQEA-VKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNA 457
           +    EA V L  M+E+   +  I I+N     +    R DN 
Sbjct: 514 DEKWTEAEVLLKDMIELG-LKPSISIWN-----MISKARFDNV 550



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 59/217 (27%), Positives = 105/217 (48%), Gaps = 13/217 (5%)

Query: 53  IINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLT 112
           I NL++A   F  M     SP ++++N+L    ++ ++   V    R++ + GL P  +T
Sbjct: 339 IGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVT 398

Query: 113 LNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVAL 172
             IL++        L   + I++A  ++ +M   G+  D+  YG LI+G C  G++  A 
Sbjct: 399 YTILMD-------ALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEAS 451

Query: 173 RLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCT 232
           +L K +      + +  K N   Y+ +I   CKEG   +A  L  EM   G+ P V    
Sbjct: 452 KLFKSL------DEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYN 505

Query: 233 TLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVM 269
           + I   C    W E   L  +M++LG +P++  +N++
Sbjct: 506 STIXILCKDEKWTEAEVLLKDMIELGLKPSISIWNMI 542


>gi|15227316|ref|NP_179280.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75217061|sp|Q9ZVX5.1|PP156_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g16880
 gi|3757517|gb|AAC64219.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|18175643|gb|AAL59902.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|20465657|gb|AAM20297.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|330251452|gb|AEC06546.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 743

 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 154/524 (29%), Positives = 260/524 (49%), Gaps = 32/524 (6%)

Query: 55  NLNEARYFFGYMTHMQPSPPISSFNLLF-GAVAKNRHYDAVISFYRKLVSIGLLPDFLTL 113
           +++ AR  F  M  +  S  + +FN+L  G   + +  DA+    R +    + PD +T 
Sbjct: 184 SISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTY 243

Query: 114 NILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALR 173
           N ++     K        R+ +   L  +M   G+ P+ +TY  L+ G+C+ G+L  A +
Sbjct: 244 NTILKAMSKK-------GRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQ 296

Query: 174 LHKKMVSGDYENGLISKTNIF----SYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVV 229
           + +          L+ +TN+     +Y+I+I+ LC  G + +  EL   MK   + P VV
Sbjct: 297 IVE----------LMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVV 346

Query: 230 VCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEA--NGLLE 287
              TLI G    G   E   L  +M + G + N +T N+ +  LCK  K  EA    + E
Sbjct: 347 TYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEK-REAVTRKVKE 405

Query: 288 LMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKIL 347
           L+   G +PD  TY++L+  Y  VG +  A E+   M  KG K   ++ N +++  CK  
Sbjct: 406 LVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKER 465

Query: 348 NVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYN 407
            ++EA +L       G     +TY TL+ G F+  +   A +++DEMK   + P +ST+N
Sbjct: 466 KLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFN 525

Query: 408 ILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQK 467
            LI GLC +   + A++ F  L  +        FN +I G CK GR++ A+E +++  + 
Sbjct: 526 SLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKH 585

Query: 468 GLVPTVVTYSIMIHGLCRKGKLEKANDFL--LYMEKNGCAPNVVTFNTLMHGFLQNNKTS 525
              P   T +I+++GLC++G  EKA +F   L  E+     + VT+NT++  F ++ K  
Sbjct: 586 SFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEERE---VDTVTYNTMISAFCKDKKLK 642

Query: 526 KVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSK 569
           +  +LL +M   E+ L PD  T++  + LL +D K  E   + K
Sbjct: 643 EAYDLLSEME--EKGLEPDRFTYNSFISLLMEDGKLSETDELLK 684



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 145/533 (27%), Positives = 254/533 (47%), Gaps = 48/533 (9%)

Query: 68  HMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGL 127
           H+ P P  + F++   A          +  ++K++ + L P+ LT N L+          
Sbjct: 124 HLSPPPSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSF 183

Query: 128 CVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGL 187
                I  A  +F +M+  GV  +V T+  L+NG+C  G L  AL + ++MVS +++   
Sbjct: 184 S----ISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVS-EFK--- 235

Query: 188 ISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEV 247
           ++  N+ +Y+ I+ ++ K+G +   KEL L+MK  G+ P  V    L++G+C  G+ +E 
Sbjct: 236 VNPDNV-TYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEA 294

Query: 248 NGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDG 307
             +   M      P+L T+N++I+ LC  G + E   L++ M    L PD  TYN+L+DG
Sbjct: 295 FQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDG 354

Query: 308 YCLVGRIDTAREIFLSMHSKGCKHTVVSYNI----------------------------- 338
              +G    AR++   M + G K   V++NI                             
Sbjct: 355 CFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSP 414

Query: 339 -------LINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLF 391
                  LI  Y K+ ++  A+ + R++   G++   IT NT+L  L +  +   A  L 
Sbjct: 415 DIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLL 474

Query: 392 DEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKA 451
           +         D  TY  LI G  +   V++A++++  ++  K    +  FN LI GLC  
Sbjct: 475 NSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHH 534

Query: 452 GRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTF 511
           G+ + A E F +L + GL+P   T++ +I G C++G++EKA +F     K+   P+  T 
Sbjct: 535 GKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTC 594

Query: 512 NTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHEC 564
           N L++G  +   T K +   + + E ER +  D  T++ ++    KD+K  E 
Sbjct: 595 NILLNGLCKEGMTEKALNFFNTLIE-EREV--DTVTYNTMISAFCKDKKLKEA 644



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 135/473 (28%), Positives = 239/473 (50%), Gaps = 19/473 (4%)

Query: 66  MTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKER 125
           ++  + +P   ++N +  A++K      +      +   GL+P+ +T N L+        
Sbjct: 231 VSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLV-------Y 283

Query: 126 GLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYEN 185
           G C    +KEA  + + M    V PD+ TY  LING C  G++   L L   M S     
Sbjct: 284 GYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKS----- 338

Query: 186 GLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWE 245
            L  + ++ +Y+ +ID   + GL  +A++L  +M+  G+    V     +   C     E
Sbjct: 339 -LKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKRE 397

Query: 246 EVNGLFIEMLDL-GPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSL 304
            V     E++D+ G  P+++T++ +I    K G ++ A  ++  M Q+G+  +  T N++
Sbjct: 398 AVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTI 457

Query: 305 MDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGV 364
           +D  C   ++D A  +  S H +G     V+Y  LI G+ +   VE+A+ ++ ++    +
Sbjct: 458 LDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKI 517

Query: 365 RQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVK 424
             TV T+N+L+ GL   G+   A + FDE+    + PD ST+N +I G CK   V++A +
Sbjct: 518 TPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFE 577

Query: 425 LFHMLEMNKFEFGIEIFNC--LIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHG 482
            ++  E  K  F  + + C  L++GLCK G  + A   F+ L ++  V T VTY+ MI  
Sbjct: 578 FYN--ESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEEREVDT-VTYNTMISA 634

Query: 483 LCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMA 535
            C+  KL++A D L  ME+ G  P+  T+N+ +   +++ K S+  ELL K +
Sbjct: 635 FCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELLKKFS 687



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 127/448 (28%), Positives = 187/448 (41%), Gaps = 79/448 (17%)

Query: 106 LLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRT 165
           +LPD  T NILIN       GLC    ++E   L   M +  ++PDV+TY TLI+G    
Sbjct: 306 VLPDLCTYNILIN-------GLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFEL 358

Query: 166 GNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKE----GLVDKAKELFLEMKG 221
           G     L L  + +    EN  + K N  +++I +  LCKE     +  K KEL   +  
Sbjct: 359 G-----LSLEARKLMEQMENDGV-KANQVTHNISLKWLCKEEKREAVTRKVKEL---VDM 409

Query: 222 RGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINE 281
            G +P +V   TLI  +   G+      +  EM   G + N +T N ++D LCK  K++E
Sbjct: 410 HGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDE 469

Query: 282 ANGLLELMIQRGLNPDRFTY-----------------------------------NSLMD 306
           A+ LL    +RG   D  TY                                   NSL+ 
Sbjct: 470 AHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIG 529

Query: 307 GYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQ 366
           G C  G+ + A E F  +   G      ++N +I GYCK   VE+A   Y + I +  + 
Sbjct: 530 GLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKP 589

Query: 367 TVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLF 426
              T N LL+GL + G    A   F+ + +   E D  TYN +I   CK+  ++EA  L 
Sbjct: 590 DNYTCNILLNGLCKEGMTEKALNFFNTL-IEEREVDTVTYNTMISAFCKDKKLKEAYDLL 648

Query: 427 HMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQK------------------- 467
             +E    E     +N  I  L + G+L    EL  K   K                   
Sbjct: 649 SEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELLKKFSGKFGSMKRDLQVETEKNPATS 708

Query: 468 ----GLVPTVVTYSIMIHGLCRKGKLEK 491
                L    + YS +I  LC +G+L++
Sbjct: 709 ESKEELNTEAIAYSDVIDELCSRGRLKE 736



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 97/366 (26%), Positives = 176/366 (48%), Gaps = 42/366 (11%)

Query: 248 NGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDG 307
           N L    L L P P+   F++ +      GK + A  + + MI+  L P+  T N+L+ G
Sbjct: 116 NSLLHPNLHLSPPPSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIG 175

Query: 308 ---YCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIIS--- 361
              Y     I +ARE+F  M   G    V ++N+L+NGYC    +E+A+ +  +++S   
Sbjct: 176 LVRYPSSFSISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFK 235

Query: 362 ---------------------------------NGVRQTVITYNTLLSGLFQAGQAGYAQ 388
                                            NG+    +TYN L+ G  + G    A 
Sbjct: 236 VNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAF 295

Query: 389 KLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGL 448
           ++ + MK  NV PDL TYNILI+GLC    ++E ++L   ++  K +  +  +N LIDG 
Sbjct: 296 QIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGC 355

Query: 449 CKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYM-EKNGCAPN 507
            + G    A +L  ++   G+    VT++I +  LC++ K E     +  + + +G +P+
Sbjct: 356 FELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPD 415

Query: 508 VVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAV 567
           +VT++TL+  +L+    S  +E++ +M   ++ +  +  T + ++D L K+ K  E   +
Sbjct: 416 IVTYHTLIKAYLKVGDLSGALEMMREMG--QKGIKMNTITLNTILDALCKERKLDEAHNL 473

Query: 568 SKSSYR 573
             S+++
Sbjct: 474 LNSAHK 479


>gi|242052075|ref|XP_002455183.1| hypothetical protein SORBIDRAFT_03g005716 [Sorghum bicolor]
 gi|241927158|gb|EES00303.1| hypothetical protein SORBIDRAFT_03g005716 [Sorghum bicolor]
          Length = 892

 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 147/485 (30%), Positives = 234/485 (48%), Gaps = 16/485 (3%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
           P + + N L   + K+R +      +R + + GL P+ +T  ILI+        LC    
Sbjct: 333 PNLFACNALIDKLCKDRRFREAERLFRGMANRGLEPNEVTYAILIH-------SLCKRGM 385

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
           + +A  +F  M   G+R  V  Y +LING+C+  N   A  L  +MV    E GL     
Sbjct: 386 MDDALCMFDRMREKGIRVTVYPYNSLINGYCQHDNFHQARGLLNEMV----EKGLAPSAA 441

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
             SYS +I  LC++G +  A EL  EM   G++  V   TTLI GFC  GN +E   LF 
Sbjct: 442 --SYSPLIAGLCRKGDLASAMELHREMARNGVSGNVYTFTTLISGFCKDGNMDEAARLFD 499

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
           +M+D    PN +TFNVMI+  C+ G + +A  L + M+ RGL PD +TY SL+   CL  
Sbjct: 500 KMIDSSVVPNEVTFNVMIEGYCRVGNVRKAFQLYDQMVDRGLTPDNYTYRSLISVLCLTL 559

Query: 313 RIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYN 372
               A+E    + +        S   L+ G+CK   + E   ++ ++ + GV+  +I++ 
Sbjct: 560 GAMKAKEFVDDLENNCVVLNSFSLTTLMYGFCKEGRLTETYHIWDEMRARGVKLDLISFT 619

Query: 373 TLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMN 432
            ++    +         LF EMK   V+PD   +  +ID   K   + +A+  +  +  +
Sbjct: 620 VIVYAALKLHDGEKISVLFREMKEKGVKPDNVFHTCMIDVHSKEENIVQALNCWDKMIAD 679

Query: 433 KFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKA 492
                +  +  LI+ LCK+G L +A  L  ++     +P   TY+  +  L  +G+LEKA
Sbjct: 680 GCSPNVVTYTVLINHLCKSGYLSSAQILCEEMLVGRFLPNSFTYNCFLDFLANEGELEKA 739

Query: 493 NDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVV 552
              L      GC  N VTFNTL+ GF +  +    ++L+      E    PD  ++S ++
Sbjct: 740 K-VLHATILEGCLANTVTFNTLIKGFCKAGQIQGAIDLMQN--NTESGFFPDCISYSTII 796

Query: 553 DLLAK 557
           + L K
Sbjct: 797 NELCK 801



 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 159/594 (26%), Positives = 265/594 (44%), Gaps = 89/594 (14%)

Query: 59  ARYFFGYMTHMQPSPPISSFNLLFG--AVAKNRHYDAVISFYRKLVSIGLLPDFLTLNIL 116
           AR  F  M  +Q   P+  +    G  A  + R+ D       ++ S G+    +  N+L
Sbjct: 179 ARDLFDEM--VQCKFPLDEYVYTAGIRAYCEIRNLDGARGLLTRMESKGVKGSAVPYNVL 236

Query: 117 INCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHK 176
           +        GLC  NR+ EA  +  +M+  G+  D +TY TL+ GFCRT  L +AL +  
Sbjct: 237 M-------YGLCRNNRVLEAVEVKNSMVERGIVADEVTYRTLVYGFCRTEELEMALEMTD 289

Query: 177 KMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIH 236
            M+S      L    ++ S S ++D L K G +DKA  L   +   G+ P +  C  LI 
Sbjct: 290 DMLS------LHFVPSVASCSFMVDGLRKRGHIDKAFRLACHLGELGMVPNLFACNALID 343

Query: 237 GFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNP 296
             C    + E   LF  M + G  PN +T+ ++I  LCK G +++A  + + M ++G+  
Sbjct: 344 KLCKDRRFREAERLFRGMANRGLEPNEVTYAILIHSLCKRGMMDDALCMFDRMREKGIRV 403

Query: 297 DRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLY 356
             + YNSL++GYC       AR +   M  KG   +  SY+ LI G C+  ++  AM L+
Sbjct: 404 TVYPYNSLINGYCQHDNFHQARGLLNEMVEKGLAPSAASYSPLIAGLCRKGDLASAMELH 463

Query: 357 RQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKN 416
           R++  NGV   V T+ TL+SG  + G    A +LFD+M   +V P+  T+N++I+G C+ 
Sbjct: 464 REMARNGVSGNVYTFTTLISGFCKDGNMDEAARLFDKMIDSSVVPNEVTFNVMIEGYCRV 523

Query: 417 NCVQEAVKLFHML------------------------EMNKFEFGIEIFN---------- 442
             V++A +L+  +                         M   EF  ++ N          
Sbjct: 524 GNVRKAFQLYDQMVDRGLTPDNYTYRSLISVLCLTLGAMKAKEFVDDLENNCVVLNSFSL 583

Query: 443 -CLIDGLCKAGRLDNA---WE--------------------------------LFHKLPQ 466
             L+ G CK GRL      W+                                LF ++ +
Sbjct: 584 TTLMYGFCKEGRLTETYHIWDEMRARGVKLDLISFTVIVYAALKLHDGEKISVLFREMKE 643

Query: 467 KGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSK 526
           KG+ P  V ++ MI    ++  + +A +    M  +GC+PNVVT+  L++   ++   S 
Sbjct: 644 KGVKPDNVFHTCMIDVHSKEENIVQALNCWDKMIADGCSPNVVTYTVLINHLCKSGYLSS 703

Query: 527 VVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKSSYRACLYVTI 580
              L  +M       +P+  T++  +D LA + +  +   +  +    CL  T+
Sbjct: 704 AQILCEEMLVGR--FLPNSFTYNCFLDFLANEGELEKAKVLHATILEGCLANTV 755



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 103/360 (28%), Positives = 182/360 (50%), Gaps = 2/360 (0%)

Query: 194 FSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIE 253
           ++ S I+ +L K      A++LF EM          V T  I  +C   N +   GL   
Sbjct: 161 YTASQILFALIKIRQFALARDLFDEMVQCKFPLDEYVYTAGIRAYCEIRNLDGARGLLTR 220

Query: 254 MLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGR 313
           M   G + + + +NV++  LC+  ++ EA  +   M++RG+  D  TY +L+ G+C    
Sbjct: 221 MESKGVKGSAVPYNVLMYGLCRNNRVLEAVEVKNSMVERGIVADEVTYRTLVYGFCRTEE 280

Query: 314 IDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNT 373
           ++ A E+   M S     +V S + +++G  K  ++++A  L   +   G+   +   N 
Sbjct: 281 LEMALEMTDDMLSLHFVPSVASCSFMVDGLRKRGHIDKAFRLACHLGELGMVPNLFACNA 340

Query: 374 LLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNK 433
           L+  L +  +   A++LF  M    +EP+  TY ILI  LCK   + +A+ +F  +    
Sbjct: 341 LIDKLCKDRRFREAERLFRGMANRGLEPNEVTYAILIHSLCKRGMMDDALCMFDRMREKG 400

Query: 434 FEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKAN 493
               +  +N LI+G C+      A  L +++ +KGL P+  +YS +I GLCRKG L  A 
Sbjct: 401 IRVTVYPYNSLINGYCQHDNFHQARGLLNEMVEKGLAPSAASYSPLIAGLCRKGDLASAM 460

Query: 494 DFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
           +    M +NG + NV TF TL+ GF ++    +   L  KM +   ++VP++ TF+++++
Sbjct: 461 ELHREMARNGVSGNVYTFTTLISGFCKDGNMDEAARLFDKMIDS--SVVPNEVTFNVMIE 518



 Score =  145 bits (365), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 103/421 (24%), Positives = 188/421 (44%), Gaps = 74/421 (17%)

Query: 55  NLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLN 114
           N ++AR     M     +P  +S++ L   + +     + +  +R++   G+  +  T  
Sbjct: 420 NFHQARGLLNEMVEKGLAPSAASYSPLIAGLCRKGDLASAMELHREMARNGVSGNVYTFT 479

Query: 115 ILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRL 174
            LI+       G C +  + EA  LF  MI   V P+ +T+  +I G+CR GN+  A +L
Sbjct: 480 TLIS-------GFCKDGNMDEAARLFDKMIDSSVVPNEVTFNVMIEGYCRVGNVRKAFQL 532

Query: 175 HKKMVS------------------------------GDYENGLISKTNIFSYSIIIDSLC 204
           + +MV                                D EN  +   N FS + ++   C
Sbjct: 533 YDQMVDRGLTPDNYTYRSLISVLCLTLGAMKAKEFVDDLENNCVV-LNSFSLTTLMYGFC 591

Query: 205 KEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRP--- 261
           KEG + +   ++ EM+ RG+   ++  T +++      + E+++ LF EM + G +P   
Sbjct: 592 KEGRLTETYHIWDEMRARGVKLDLISFTVIVYAALKLHDGEKISVLFREMKEKGVKPDNV 651

Query: 262 --------------------------------NLLTFNVMIDCLCKGGKINEANGLLELM 289
                                           N++T+ V+I+ LCK G ++ A  L E M
Sbjct: 652 FHTCMIDVHSKEENIVQALNCWDKMIADGCSPNVVTYTVLINHLCKSGYLSSAQILCEEM 711

Query: 290 IQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNV 349
           +     P+ FTYN  +D     G ++ A+ +  ++  +GC    V++N LI G+CK   +
Sbjct: 712 LVGRFLPNSFTYNCFLDFLANEGELEKAKVLHATI-LEGCLANTVTFNTLIKGFCKAGQI 770

Query: 350 EEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNIL 409
           + A+ L +    +G     I+Y+T+++ L + G    A +L++EM    ++PD+  YNIL
Sbjct: 771 QGAIDLMQNNTESGFFPDCISYSTIINELCKVGDINKAFQLWNEMLYKGLKPDIVAYNIL 830

Query: 410 I 410
           I
Sbjct: 831 I 831



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 86/323 (26%), Positives = 147/323 (45%), Gaps = 53/323 (16%)

Query: 40  QLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYR 99
            L   ++  CK G   L E  + +  M        + SF ++  A  K    + +   +R
Sbjct: 582 SLTTLMYGFCKEG--RLTETYHIWDEMRARGVKLDLISFTVIVYAALKLHDGEKISVLFR 639

Query: 100 KLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLI 159
           ++   G+ PD +    +I+    +E        I +A   +  MIA G  P+V+TY  LI
Sbjct: 640 EMKEKGVKPDNVFHTCMIDVHSKEEN-------IVQALNCWDKMIADGCSPNVVTYTVLI 692

Query: 160 NGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEM 219
           N  C++G LS A  L ++M+ G +        N F+Y+  +D L  EG ++KAK      
Sbjct: 693 NHLCKSGYLSSAQILCEEMLVGRF------LPNSFTYNCFLDFLANEGELEKAK------ 740

Query: 220 KGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKI 279
                    V+  T++ G C A                    N +TFN +I   CK G+I
Sbjct: 741 ---------VLHATILEG-CLA--------------------NTVTFNTLIKGFCKAGQI 770

Query: 280 NEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNIL 339
             A  L++   + G  PD  +Y+++++  C VG I+ A +++  M  KG K  +V+YNIL
Sbjct: 771 QGAIDLMQNNTESGFFPDCISYSTIINELCKVGDINKAFQLWNEMLYKGLKPDIVAYNIL 830

Query: 340 INGYCKIL-NVEEAMSLYRQIIS 361
           I  +C I    ++ + +Y  +++
Sbjct: 831 IR-WCNIHGEFDKGLGIYSDMVN 852



 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 55/223 (24%), Positives = 100/223 (44%), Gaps = 2/223 (0%)

Query: 341 NGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVE 400
           + Y ++    +A  + R  +S+G+     T + +L  L +  Q   A+ LFDEM      
Sbjct: 133 SSYLRLRRARDAADVLRLSLSSGIAMKQYTASQILFALIKIRQFALARDLFDEMVQCKFP 192

Query: 401 PDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWEL 460
            D   Y   I   C+   +  A  L   +E    +     +N L+ GLC+  R+  A E+
Sbjct: 193 LDEYVYTAGIRAYCEIRNLDGARGLLTRMESKGVKGSAVPYNVLMYGLCRNNRVLEAVEV 252

Query: 461 FHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQ 520
            + + ++G+V   VTY  +++G CR  +LE A +    M      P+V + + ++ G  +
Sbjct: 253 KNSMVERGIVADEVTYRTLVYGFCRTEELEMALEMTDDMLSLHFVPSVASCSFMVDGLRK 312

Query: 521 NNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
                K   L   +   E  +VP+    + ++D L KD ++ E
Sbjct: 313 RGHIDKAFRLACHLG--ELGMVPNLFACNALIDKLCKDRRFRE 353



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 48/186 (25%), Positives = 93/186 (50%), Gaps = 14/186 (7%)

Query: 72  SPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVEN 131
           SP + ++ +L   + K+ +  +      +++    LP+  T N  ++   N       E 
Sbjct: 682 SPNVVTYTVLINHLCKSGYLSSAQILCEEMLVGRFLPNSFTYNCFLDFLAN-------EG 734

Query: 132 RIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKT 191
            +++A  L   ++  G   + +T+ TLI GFC+ G +  A+ L    +  + E+G     
Sbjct: 735 ELEKAKVLHATILE-GCLANTVTFNTLIKGFCKAGQIQGAIDL----MQNNTESGFFP-- 787

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
           +  SYS II+ LCK G ++KA +L+ EM  +G+ P +V    LI      G +++  G++
Sbjct: 788 DCISYSTIINELCKVGDINKAFQLWNEMLYKGLKPDIVAYNILIRWCNIHGEFDKGLGIY 847

Query: 252 IEMLDL 257
            +M++L
Sbjct: 848 SDMVNL 853



 Score = 39.7 bits (91), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 27/109 (24%), Positives = 44/109 (40%), Gaps = 7/109 (6%)

Query: 77  SFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEA 136
           +FN L     K       I   +     G  PD ++ + +IN        LC    I +A
Sbjct: 756 TFNTLIKGFCKAGQIQGAIDLMQNNTESGFFPDCISYSTIIN-------ELCKVGDINKA 808

Query: 137 TWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYEN 185
             L+  M+  G++PD++ Y  LI      G     L ++  MV+  Y +
Sbjct: 809 FQLWNEMLYKGLKPDIVAYNILIRWCNIHGEFDKGLGIYSDMVNLKYAD 857


>gi|302756535|ref|XP_002961691.1| hypothetical protein SELMODRAFT_403786 [Selaginella moellendorffii]
 gi|300170350|gb|EFJ36951.1| hypothetical protein SELMODRAFT_403786 [Selaginella moellendorffii]
          Length = 545

 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 133/418 (31%), Positives = 223/418 (53%), Gaps = 15/418 (3%)

Query: 131 NRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISK 190
            R+++A   F++ +     PD ++Y TL+NGF + G++  AL L  +M     ++G+   
Sbjct: 116 RRVEDAHLFFQSHMKNVFEPDEVSYNTLMNGFFKAGDVKKALALFGEM----KDSGIAV- 170

Query: 191 TNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGL 250
             + S++I++  LC  G +  A E+F +M G   +P ++  T +I G C +   ++   L
Sbjct: 171 --LRSHNIVLRGLCSGGKISMAWEVFKDMSGI-FSPNLISYTIMIDGLCKSRKVDKAITL 227

Query: 251 FIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCL 310
           F +M+D    P+++T+  +ID L K  ++ EA  L E    +G +P   TYN+++DG C 
Sbjct: 228 FKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKGCHPTVVTYNTMIDGLCK 287

Query: 311 VGRIDTAREIFLSM-HSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVI 369
            GRI+ A  ++  M      K  + +Y+ LING       E+A  LY +++  G    V+
Sbjct: 288 CGRIENALTLYDDMVREPHLKPDMFTYSALINGLNLSNRGEKAYELYEEMLDTGCSPDVV 347

Query: 370 TYNTLLSGLFQAGQAGYAQKLFDEMKLYNV-EPDLSTYNILIDGLCKNNCVQEAVKLFHM 428
           TYNTLL GL ++G    A ++F +M + NV +P++ TY +LID  CK + + +AVKL   
Sbjct: 348 TYNTLLDGLCKSGCEDKAMEIFRKMGVGNVCDPNVITYTVLIDRFCKVDRLGDAVKLAKE 407

Query: 429 LEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGK 488
           +E          F  +I  LCK  R+D A ELF  +  K   P  V ++ M+ G C+  +
Sbjct: 408 MEGRSLLPDAVTFTTVIQKLCKESRIDEAHELFESI-GKTCKPDSVLFNTMLAGYCKITR 466

Query: 489 LEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAE----PERNLV 542
           ++ A      M  +GCAP + T+  L+ GF +  + S  + + H+M E    PER+L 
Sbjct: 467 IDDAKKLHDRMLDSGCAPTLATYTALVTGFCRTGRYSDALIMYHEMIEMGFPPERHLA 524



 Score =  205 bits (521), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 141/424 (33%), Positives = 219/424 (51%), Gaps = 21/424 (4%)

Query: 79  NLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATW 138
           NLL   V   R  DA + F   + ++   PD ++ N L+N       G      +K+A  
Sbjct: 107 NLLSVYVKARRVEDAHLFFQSHMKNV-FEPDEVSYNTLMN-------GFFKAGDVKKALA 158

Query: 139 LFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSI 198
           LF  M   G+   + ++  ++ G C  G +S+A  + K M      +G+ S  N+ SY+I
Sbjct: 159 LFGEMKDSGIAV-LRSHNIVLRGLCSGGKISMAWEVFKDM------SGIFS-PNLISYTI 210

Query: 199 IIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLG 258
           +ID LCK   VDKA  LF +M  + I P VV    LI G       +E   LF E    G
Sbjct: 211 MIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKG 270

Query: 259 PRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRG-LNPDRFTYNSLMDGYCLVGRIDTA 317
             P ++T+N MID LCK G+I  A  L + M++   L PD FTY++L++G  L  R + A
Sbjct: 271 CHPTVVTYNTMIDGLCKCGRIENALTLYDDMVREPHLKPDMFTYSALINGLNLSNRGEKA 330

Query: 318 REIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQI-ISNGVRQTVITYNTLLS 376
            E++  M   GC   VV+YN L++G CK    ++AM ++R++ + N     VITY  L+ 
Sbjct: 331 YELYEEMLDTGCSPDVVTYNTLLDGLCKSGCEDKAMEIFRKMGVGNVCDPNVITYTVLID 390

Query: 377 GLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEF 436
              +  + G A KL  EM+  ++ PD  T+  +I  LCK + + EA +LF  +       
Sbjct: 391 RFCKVDRLGDAVKLAKEMEGRSLLPDAVTFTTVIQKLCKESRIDEAHELFESIGKTCKPD 450

Query: 437 GIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFL 496
            + +FN ++ G CK  R+D+A +L  ++   G  PT+ TY+ ++ G CR G+   A   +
Sbjct: 451 SV-LFNTMLAGYCKITRIDDAKKLHDRMLDSGCAPTLATYTALVTGFCRTGRYSDA--LI 507

Query: 497 LYME 500
           +Y E
Sbjct: 508 MYHE 511



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 117/379 (30%), Positives = 209/379 (55%), Gaps = 23/379 (6%)

Query: 195 SYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLI-HGFCCAGN----WE---E 246
           SY+ +++   K G V KA  LF EMK  GI  AV+    ++  G C  G     WE   +
Sbjct: 139 SYNTLMNGFFKAGDVKKALALFGEMKDSGI--AVLRSHNIVLRGLCSGGKISMAWEVFKD 196

Query: 247 VNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMD 306
           ++G+F         PNL+++ +MID LCK  K+++A  L + M+ + + PD  TY +L+D
Sbjct: 197 MSGIF--------SPNLISYTIMIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALID 248

Query: 307 GYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNG-VR 365
           G     R+  A ++F    +KGC  TVV+YN +I+G CK   +E A++LY  ++    ++
Sbjct: 249 GLGKQRRVKEAYDLFEEARAKGCHPTVVTYNTMIDGLCKCGRIENALTLYDDMVREPHLK 308

Query: 366 QTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKL 425
             + TY+ L++GL  + +   A +L++EM      PD+ TYN L+DGLCK+ C  +A+++
Sbjct: 309 PDMFTYSALINGLNLSNRGEKAYELYEEMLDTGCSPDVVTYNTLLDGLCKSGCEDKAMEI 368

Query: 426 FHMLEM-NKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLC 484
           F  + + N  +  +  +  LID  CK  RL +A +L  ++  + L+P  VT++ +I  LC
Sbjct: 369 FRKMGVGNVCDPNVITYTVLIDRFCKVDRLGDAVKLAKEMEGRSLLPDAVTFTTVIQKLC 428

Query: 485 RKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPD 544
           ++ ++++A++    + K  C P+ V FNT++ G+ +  +     +L  +M   +    P 
Sbjct: 429 KESRIDEAHELFESIGKT-CKPDSVLFNTMLAGYCKITRIDDAKKLHDRML--DSGCAPT 485

Query: 545 DTTFSIVVDLLAKDEKYHE 563
             T++ +V    +  +Y +
Sbjct: 486 LATYTALVTGFCRTGRYSD 504



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 107/325 (32%), Positives = 178/325 (54%), Gaps = 16/325 (4%)

Query: 72  SPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVEN 131
           SP + S+ ++   + K+R  D  I+ ++++V   + PD +T   LI+       GL  + 
Sbjct: 202 SPNLISYTIMIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALID-------GLGKQR 254

Query: 132 RIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKT 191
           R+KEA  LF+   A G  P V+TY T+I+G C+ G +  AL L+  MV   +      K 
Sbjct: 255 RVKEAYDLFEEARAKGCHPTVVTYNTMIDGLCKCGRIENALTLYDDMVREPH-----LKP 309

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
           ++F+YS +I+ L      +KA EL+ EM   G +P VV   TL+ G C +G  ++   +F
Sbjct: 310 DMFTYSALINGLNLSNRGEKAYELYEEMLDTGCSPDVVTYNTLLDGLCKSGCEDKAMEIF 369

Query: 252 IEMLDLGP--RPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYC 309
            +M  +G    PN++T+ V+ID  CK  ++ +A  L + M  R L PD  T+ +++   C
Sbjct: 370 RKM-GVGNVCDPNVITYTVLIDRFCKVDRLGDAVKLAKEMEGRSLLPDAVTFTTVIQKLC 428

Query: 310 LVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVI 369
              RID A E+F S+  K CK   V +N ++ GYCKI  +++A  L+ +++ +G   T+ 
Sbjct: 429 KESRIDEAHELFESI-GKTCKPDSVLFNTMLAGYCKITRIDDAKKLHDRMLDSGCAPTLA 487

Query: 370 TYNTLLSGLFQAGQAGYAQKLFDEM 394
           TY  L++G  + G+   A  ++ EM
Sbjct: 488 TYTALVTGFCRTGRYSDALIMYHEM 512



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 102/348 (29%), Positives = 183/348 (52%), Gaps = 6/348 (1%)

Query: 230 VCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELM 289
            C  L+  +  A   E+ +  F   +     P+ +++N +++   K G + +A  L   M
Sbjct: 104 TCNNLLSVYVKARRVEDAHLFFQSHMKNVFEPDEVSYNTLMNGFFKAGDVKKALALFGEM 163

Query: 290 IQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNV 349
              G+   R ++N ++ G C  G+I  A E+F  M S      ++SY I+I+G CK   V
Sbjct: 164 KDSGIAVLR-SHNIVLRGLCSGGKISMAWEVFKDM-SGIFSPNLISYTIMIDGLCKSRKV 221

Query: 350 EEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNIL 409
           ++A++L++Q++   +   V+TY  L+ GL +  +   A  LF+E +     P + TYN +
Sbjct: 222 DKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKGCHPTVVTYNTM 281

Query: 410 IDGLCKNNCVQEAVKLFH-MLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKG 468
           IDGLCK   ++ A+ L+  M+     +  +  ++ LI+GL  + R + A+EL+ ++   G
Sbjct: 282 IDGLCKCGRIENALTLYDDMVREPHLKPDMFTYSALINGLNLSNRGEKAYELYEEMLDTG 341

Query: 469 LVPTVVTYSIMIHGLCRKGKLEKANDFLLYME-KNGCAPNVVTFNTLMHGFLQNNKTSKV 527
             P VVTY+ ++ GLC+ G  +KA +    M   N C PNV+T+  L+  F + ++    
Sbjct: 342 CSPDVVTYNTLLDGLCKSGCEDKAMEIFRKMGVGNVCDPNVITYTVLIDRFCKVDRLGDA 401

Query: 528 VELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKSSYRAC 575
           V+L  +M    R+L+PD  TF+ V+  L K+ +  E   + +S  + C
Sbjct: 402 VKLAKEMEG--RSLLPDAVTFTTVIQKLCKESRIDEAHELFESIGKTC 447



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 70/262 (26%), Positives = 120/262 (45%), Gaps = 49/262 (18%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLV-SIGLLPDFLTLNILINCFGNKERGLCVEN 131
           P + ++N +   + K    +  ++ Y  +V    L PD  T + LIN       GL + N
Sbjct: 273 PTVVTYNTMIDGLCKCGRIENALTLYDDMVREPHLKPDMFTYSALIN-------GLNLSN 325

Query: 132 RIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKT 191
           R ++A  L++ M+  G  PDV+TY TL++G C++G    A+ + +KM  G+     +   
Sbjct: 326 RGEKAYELYEEMLDTGCSPDVVTYNTLLDGLCKSGCEDKAMEIFRKMGVGN-----VCDP 380

Query: 192 NIFSYSIIID-----------------------------------SLCKEGLVDKAKELF 216
           N+ +Y+++ID                                    LCKE  +D+A ELF
Sbjct: 381 NVITYTVLIDRFCKVDRLGDAVKLAKEMEGRSLLPDAVTFTTVIQKLCKESRIDEAHELF 440

Query: 217 LEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKG 276
            E  G+   P  V+  T++ G+C     ++   L   MLD G  P L T+  ++   C+ 
Sbjct: 441 -ESIGKTCKPDSVLFNTMLAGYCKITRIDDAKKLHDRMLDSGCAPTLATYTALVTGFCRT 499

Query: 277 GKINEANGLLELMIQRGLNPDR 298
           G+ ++A  +   MI+ G  P+R
Sbjct: 500 GRYSDALIMYHEMIEMGFPPER 521


>gi|222639781|gb|EEE67913.1| hypothetical protein OsJ_25766 [Oryza sativa Japonica Group]
          Length = 625

 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 159/570 (27%), Positives = 262/570 (45%), Gaps = 60/570 (10%)

Query: 8   RCLFSSETVSKVKLSSLF-KSPRQIAAVSSPETQLNEFLHENCKS-GIINLNEA---RYF 62
           R L      S     SLF + PR  A  ++P       +   C+  G ++L  A   R  
Sbjct: 67  RALSDVARASPAVAISLFNRMPRAGATSAAPNIATYGIVIGCCRRLGRLDLAFATVGRVI 126

Query: 63  FGYMTHMQPSP-PISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFG 121
              + H +P+P   SS   L  A  +    D V+   R++  +G  PD  +  IL+    
Sbjct: 127 TTGLRH-EPNPLQSSSQGPLCTAGGRAMRMDIVL---RRMPELGCKPDLFSYTILL---- 178

Query: 122 NKERGLCVENRIKEATWLFKNMIAFGVR-P-DVITYGTLINGFCRTGNLSVALRLHKKMV 179
              +GLC +   ++A  L   M     R P DV+ Y T+ING  R G L  A  L   M+
Sbjct: 179 ---KGLCDDKTSQQALDLLHIMADHKGRCPLDVVAYTTVINGLLREGQLDKAYSLFDAML 235

Query: 180 SGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFC 239
               + G     ++ +YS II +L K   +DKA ++F  M   G+ P  ++ T+L+HG+C
Sbjct: 236 ----DRG--PSPDVVTYSSIISALSKTQAMDKATQVFTRMVKNGVMPDCIMYTSLVHGYC 289

Query: 240 CAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRF 299
            +G  +E  G+F +M   G  P+++T+  ++D LCK GK  EA  + + +++RG  PD  
Sbjct: 290 SSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKSTEARKIFDSLVKRGHKPDST 349

Query: 300 TYNSLMDGYCLVG-----------------------------------RIDTAREIFLSM 324
           TY +L+ GY   G                                   ++D A  +F +M
Sbjct: 350 TYGTLLHGYATEGALVEMHDLLDLMMKKGMQLGHHIFNMIMGAYAKHNKVDEALLVFSNM 409

Query: 325 HSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQA 384
             +G    +V+Y  +++  C    V++A+S +  + S G+   ++ + TL+ GL    + 
Sbjct: 410 RQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSLKSEGLAPNIVVFTTLIHGLCTCDKW 469

Query: 385 GYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCL 444
              ++L  EM    +  D   +N ++  LCK   V EA  LF ++     E     +N L
Sbjct: 470 DKVEELAFEMIDRGICLDTIFFNAIMGNLCKKGRVIEAKNLFDLMVRIGIEPNTNTYNTL 529

Query: 445 IDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGC 504
           IDG C  G++D A +L   +   G+ P+ VTY+ +I+G  + G++E     L  M+  G 
Sbjct: 530 IDGYCLDGKMDEAMKLLGVMVFNGVKPSDVTYNTIINGYSQNGRIEDGLTLLREMDGKGV 589

Query: 505 APNVVTFNTLMHGFLQNNKTSKVVELLHKM 534
            P +VT+  L+ G  Q  +T    EL  +M
Sbjct: 590 NPGIVTYEMLLQGLFQAGRTVAAKELYLRM 619



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 121/427 (28%), Positives = 216/427 (50%), Gaps = 13/427 (3%)

Query: 75  ISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIK 134
           + ++  +   + +    D   S +  ++  G  PD +T + +I+     +        + 
Sbjct: 208 VVAYTTVINGLLREGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQA-------MD 260

Query: 135 EATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIF 194
           +AT +F  M+  GV PD I Y +L++G+C +G    A+ + KKM     E       ++ 
Sbjct: 261 KATQVFTRMVKNGVMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVE------PDVV 314

Query: 195 SYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEM 254
           +Y+ ++D LCK G   +A+++F  +  RG  P      TL+HG+   G   E++ L   M
Sbjct: 315 TYTALMDYLCKNGKSTEARKIFDSLVKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLM 374

Query: 255 LDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRI 314
           +  G +     FN+++    K  K++EA  +   M Q+GLNPD   Y +++D  C  GR+
Sbjct: 375 MKKGMQLGHHIFNMIMGAYAKHNKVDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRV 434

Query: 315 DTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTL 374
           D A   F S+ S+G    +V +  LI+G C     ++   L  ++I  G+    I +N +
Sbjct: 435 DDALSQFNSLKSEGLAPNIVVFTTLIHGLCTCDKWDKVEELAFEMIDRGICLDTIFFNAI 494

Query: 375 LSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKF 434
           +  L + G+   A+ LFD M    +EP+ +TYN LIDG C +  + EA+KL  ++  N  
Sbjct: 495 MGNLCKKGRVIEAKNLFDLMVRIGIEPNTNTYNTLIDGYCLDGKMDEAMKLLGVMVFNGV 554

Query: 435 EFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKAND 494
           +     +N +I+G  + GR+++   L  ++  KG+ P +VTY +++ GL + G+   A +
Sbjct: 555 KPSDVTYNTIINGYSQNGRIEDGLTLLREMDGKGVNPGIVTYEMLLQGLFQAGRTVAAKE 614

Query: 495 FLLYMEK 501
             L M K
Sbjct: 615 LYLRMIK 621



 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 141/551 (25%), Positives = 250/551 (45%), Gaps = 27/551 (4%)

Query: 29  RQIAAVSSPETQL-NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAK 87
           RQ A       Q+ +  L    ++ I +LN A      +    P+  IS FN +  A A 
Sbjct: 37  RQRATEPGDAHQVFDRLLKRGDRASIFDLNRA---LSDVARASPAVAISLFNRMPRAGAT 93

Query: 88  NRH-----YDAVISFYRKLVSIGLLPDFLTLNILI--------NCFGNKERG-LCVEN-R 132
           +       Y  VI   R+L  + L   F T+  +I        N   +  +G LC    R
Sbjct: 94  SAAPNIATYGIVIGCCRRLGRLDLA--FATVGRVITTGLRHEPNPLQSSSQGPLCTAGGR 151

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
                 + + M   G +PD+ +Y  L+ G C       AL L   M        L    +
Sbjct: 152 AMRMDIVLRRMPELGCKPDLFSYTILLKGLCDDKTSQQALDLLHIMADHKGRCPL----D 207

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
           + +Y+ +I+ L +EG +DKA  LF  M  RG +P VV  +++I         ++   +F 
Sbjct: 208 VVAYTTVINGLLREGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVFT 267

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
            M+  G  P+ + +  ++   C  GK  EA G+ + M + G+ PD  TY +LMD  C  G
Sbjct: 268 RMVKNGVMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNG 327

Query: 313 RIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYN 372
           +   AR+IF S+  +G K    +Y  L++GY     + E   L   ++  G++     +N
Sbjct: 328 KSTEARKIFDSLVKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQLGHHIFN 387

Query: 373 TLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMN 432
            ++    +  +   A  +F  M+   + PD+  Y  ++D LC    V +A+  F+ L+  
Sbjct: 388 MIMGAYAKHNKVDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSLKSE 447

Query: 433 KFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKA 492
                I +F  LI GLC   + D   EL  ++  +G+    + ++ ++  LC+KG++ +A
Sbjct: 448 GLAPNIVVFTTLIHGLCTCDKWDKVEELAFEMIDRGICLDTIFFNAIMGNLCKKGRVIEA 507

Query: 493 NDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVV 552
            +    M + G  PN  T+NTL+ G+  + K  + ++LL  M      + P D T++ ++
Sbjct: 508 KNLFDLMVRIGIEPNTNTYNTLIDGYCLDGKMDEAMKLLGVMV--FNGVKPSDVTYNTII 565

Query: 553 DLLAKDEKYHE 563
           +  +++ +  +
Sbjct: 566 NGYSQNGRIED 576



 Score = 52.4 bits (124), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 36/142 (25%), Positives = 59/142 (41%), Gaps = 9/142 (6%)

Query: 41  LNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRK 100
            N  +   CK G   + EA+  F  M  +   P  +++N L      +   D  +     
Sbjct: 491 FNAIMGNLCKKG--RVIEAKNLFDLMVRIGIEPNTNTYNTLIDGYCLDGKMDEAMKLLGV 548

Query: 101 LVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLIN 160
           +V  G+ P  +T N +IN       G     RI++   L + M   GV P ++TY  L+ 
Sbjct: 549 MVFNGVKPSDVTYNTIIN-------GYSQNGRIEDGLTLLREMDGKGVNPGIVTYEMLLQ 601

Query: 161 GFCRTGNLSVALRLHKKMVSGD 182
           G  + G    A  L+ +M+  D
Sbjct: 602 GLFQAGRTVAAKELYLRMIKWD 623


>gi|218184398|gb|EEC66825.1| hypothetical protein OsI_33257 [Oryza sativa Indica Group]
          Length = 948

 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 135/487 (27%), Positives = 225/487 (46%), Gaps = 39/487 (8%)

Query: 58  EARYFFGYMTHMQPSPPIS-SFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNIL 116
           +A   +  M H    PP + +F +   A+ +    +  ++  R +   G +PD +    +
Sbjct: 157 DALALYRRMVHRDRVPPTTFTFGVAARALCRLGRANEALALLRGMARHGCVPDAVLYQTV 216

Query: 117 I----------------------------NCFGNKERGLCVENRIKEATWLFKNMIAFGV 148
           I                            N F +  RG+C   R++EA  L   M+  G 
Sbjct: 217 IHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGC 276

Query: 149 RPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGL 208
            P V+TYG L+ G CR      A    + M+      G + + N+  ++ +I     EG 
Sbjct: 277 MPGVMTYGFLLQGLCRVRQADEA----RAML------GRVPELNVVLFNTVIGGCLAEGK 326

Query: 209 VDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNV 268
           + +A EL+  M  +G  P     + L+HG C  G       L  EM   G  PN++T+ +
Sbjct: 327 LAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRISSAVRLLREMEKKGFAPNVVTYTI 386

Query: 269 MIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKG 328
           ++   CK G  ++   LLE M  +GL  +   YN ++   C  GR+D A  +   M S+G
Sbjct: 387 VLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQG 446

Query: 329 CKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQ 388
           C   + SYN +I   C    +EEA  ++  ++  GV    ITYNT++  L + G+   A 
Sbjct: 447 CNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAV 506

Query: 389 KLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGL 448
           +L  EM L+    D+ +YN LI  +CK+  V  ++ L   +     +     +N LI  L
Sbjct: 507 RLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISEL 566

Query: 449 CKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNV 508
           CK  R+ +A EL  ++  +GL P +VTY+ +I+GLC+ G +  A + L  +      P++
Sbjct: 567 CKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDI 626

Query: 509 VTFNTLM 515
           +T+N L+
Sbjct: 627 ITYNILI 633



 Score =  202 bits (515), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 136/516 (26%), Positives = 235/516 (45%), Gaps = 53/516 (10%)

Query: 72  SPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVEN 131
            P   S+N++   +A+   +   ++ YR++V    +P           FG   R LC   
Sbjct: 136 QPSFRSYNVVLSVLARADCHADALALYRRMVHRDRVPPTTF------TFGVAARALCRLG 189

Query: 132 RIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKT 191
           R  EA  L + M   G  PD + Y T+I+  C  G ++ A  L  +M+       +    
Sbjct: 190 RANEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLL------MGCAA 243

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
           ++ ++  ++  +C  G V +A  L   M  +G  P V+    L+ G C     +E     
Sbjct: 244 DVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARA-- 301

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
             ML   P  N++ FN +I      GK+ EA  L E M  +G  PD  TY+ LM G C +
Sbjct: 302 --MLGRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKL 359

Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
           GRI +A  +   M  KG    VV+Y I+++ +CK    ++  +L  ++ + G+      Y
Sbjct: 360 GRISSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGY 419

Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFH---- 427
           N ++  L + G+   A  L  EM+     PD+ +YN +I  LC N  ++EA  +F     
Sbjct: 420 NGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLE 479

Query: 428 ----------------MLEMNKFEFGIEI---------------FNCLIDGLCKAGRLDN 456
                           +L   +++  + +               +N LI  +CK G +D 
Sbjct: 480 EGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDR 539

Query: 457 AWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMH 516
           +  L  ++ +KG+ P  V+Y+I+I  LC++ ++  A +    M   G AP++VT+NTL++
Sbjct: 540 SLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLIN 599

Query: 517 GFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVV 552
           G  +       + LL K+     N+ PD  T++I++
Sbjct: 600 GLCKMGWMHAALNLLEKLH--NENVHPDIITYNILI 633



 Score =  184 bits (468), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 120/456 (26%), Positives = 216/456 (47%), Gaps = 38/456 (8%)

Query: 146 FGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCK 205
           FGV+P   +Y  +++   R    + AL L+++MV  D           F++ +   +LC+
Sbjct: 133 FGVQPSFRSYNVVLSVLARADCHADALALYRRMVHRDR-----VPPTTFTFGVAARALCR 187

Query: 206 EGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLT 265
            G  ++A  L   M   G  P  V+  T+IH  C  G   E   L  EML +G   ++ T
Sbjct: 188 LGRANEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNT 247

Query: 266 FNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAR------- 318
           F+ ++  +C  G++ EA  L++ M+ +G  P   TY  L+ G C V + D AR       
Sbjct: 248 FDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRVP 307

Query: 319 ------------------------EIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMS 354
                                   E++ +M  KGC+    +Y+IL++G CK+  +  A+ 
Sbjct: 308 ELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRISSAVR 367

Query: 355 LYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLC 414
           L R++   G    V+TY  +L    + G     + L +EM    +  +   YN +I  LC
Sbjct: 368 LLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALC 427

Query: 415 KNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVV 474
           K+  + EA+ L   +        I  +N +I  LC   +++ A  +F  L ++G+V   +
Sbjct: 428 KDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGI 487

Query: 475 TYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKM 534
           TY+ +IH L R G+ + A      M  +GC+ +VV++N L+    ++    + + LL +M
Sbjct: 488 TYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEM 547

Query: 535 AEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKS 570
           A  E+ + P++ +++I++  L K+ +  +   +SK 
Sbjct: 548 A--EKGIKPNNVSYNILISELCKERRVRDALELSKQ 581



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 125/445 (28%), Positives = 206/445 (46%), Gaps = 30/445 (6%)

Query: 32  AAVSSPETQLNEFLHENCKS-------------GIINLNEARYFFGYMTHMQPSPPISSF 78
             V+   T LNE L   C +             G+  + EA      M      P + ++
Sbjct: 224 GGVTEAATLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTY 283

Query: 79  NLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATW 138
             L   + + R  D   +       +G +P+   LN+++  F     G   E ++ EAT 
Sbjct: 284 GFLLQGLCRVRQADEARAM------LGRVPE---LNVVL--FNTVIGGCLAEGKLAEATE 332

Query: 139 LFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSI 198
           L++ M   G +PD  TY  L++G C+ G +S A+RL ++M    +        N+ +Y+I
Sbjct: 333 LYETMGLKGCQPDAHTYSILMHGLCKLGRISSAVRLLREMEKKGF------APNVVTYTI 386

Query: 199 IIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLG 258
           ++ S CK G+ D  + L  EM  +G+         +I+  C  G  +E  GL  EM   G
Sbjct: 387 VLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQG 446

Query: 259 PRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAR 318
             P++ ++N +I  LC   ++ EA  + E +++ G+  +  TYN+++      GR   A 
Sbjct: 447 CNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAV 506

Query: 319 EIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGL 378
            +   M   GC   VVSYN LI   CK  NV+ ++ L  ++   G++   ++YN L+S L
Sbjct: 507 RLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISEL 566

Query: 379 FQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGI 438
            +  +   A +L  +M    + PD+ TYN LI+GLCK   +  A+ L   L        I
Sbjct: 567 CKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDI 626

Query: 439 EIFNCLIDGLCKAGRLDNAWELFHK 463
             +N LI   CK   LD+A  L ++
Sbjct: 627 ITYNILISWHCKVRLLDDAAMLLNR 651



 Score =  125 bits (314), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 86/318 (27%), Positives = 158/318 (49%), Gaps = 15/318 (4%)

Query: 44  FLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVS 103
            +H  CK G I+   A      M     +P + ++ ++  +  KN  +D   +   ++ +
Sbjct: 352 LMHGLCKLGRIS--SAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSA 409

Query: 104 IGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFC 163
            GL  +    N +I         LC + R+ EA  L + M + G  PD+ +Y T+I   C
Sbjct: 410 KGLTLNSQGYNGMI-------YALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLC 462

Query: 164 RTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRG 223
               +  A  + + ++    E G+++  N  +Y+ II +L ++G    A  L  EM   G
Sbjct: 463 NNEQMEEAEHMFENLL----EEGVVA--NGITYNTIIHALLRDGRWQDAVRLAKEMILHG 516

Query: 224 INPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEAN 283
            +  VV    LI   C  GN +    L  EM + G +PN +++N++I  LCK  ++ +A 
Sbjct: 517 CSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDAL 576

Query: 284 GLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGY 343
            L + M+ +GL PD  TYN+L++G C +G +  A  +   +H++     +++YNILI+ +
Sbjct: 577 ELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILISWH 636

Query: 344 CKILNVEEAMSLYRQIIS 361
           CK+  +++A  L  + ++
Sbjct: 637 CKVRLLDDAAMLLNRAMA 654



 Score = 79.0 bits (193), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 47/185 (25%), Positives = 88/185 (47%), Gaps = 4/185 (2%)

Query: 385 GYAQKLFDEM-KLYNVEPDLSTYNILIDGLCKNNCVQEAVKLF-HMLEMNKFEFGIEIFN 442
           G A  L D++ + + V+P   +YN+++  L + +C  +A+ L+  M+  ++       F 
Sbjct: 120 GRALHLLDQLPRRFGVQPSFRSYNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFG 179

Query: 443 CLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKN 502
                LC+ GR + A  L   + + G VP  V Y  +IH LC +G + +A   L  M   
Sbjct: 180 VAARALCRLGRANEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLM 239

Query: 503 GCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYH 562
           GCA +V TF+ ++ G     +  +   L+ +M    +  +P   T+  ++  L +  +  
Sbjct: 240 GCAADVNTFDDVVRGMCGLGRVREAARLVDRMM--TKGCMPGVMTYGFLLQGLCRVRQAD 297

Query: 563 ECSAV 567
           E  A+
Sbjct: 298 EARAM 302


>gi|302755296|ref|XP_002961072.1| hypothetical protein SELMODRAFT_75621 [Selaginella moellendorffii]
 gi|300172011|gb|EFJ38611.1| hypothetical protein SELMODRAFT_75621 [Selaginella moellendorffii]
          Length = 628

 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 149/532 (28%), Positives = 249/532 (46%), Gaps = 58/532 (10%)

Query: 75  ISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIK 134
           + ++  L   + K+   DA  +  +K+   G  P+ +T   LI+       GLC   R  
Sbjct: 10  VVTYTTLIDGLCKSGDLDAAQALLQKMADAGCAPNVVTYTALID-------GLCKARRPH 62

Query: 135 EATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIF 194
           +A    K M+  G  PD++TY +LI+G C    +  A  + +++V     NG     N  
Sbjct: 63  DAIQTVKRMLRSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQELV----RNGF--APNHI 116

Query: 195 SYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCA----GNWEEVNGL 250
           +YS ++   C+   +D+A+ L  EM  RG    +VV    I GFC A      +E  +G 
Sbjct: 117 TYSTLVIWNCRRRRLDQARGLIREMILRGSVCNLVVYIDCIFGFCEARCQSSRYECRDG- 175

Query: 251 FIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCL 310
             EM++ G  P+++T+N  I  LCK GK+++   +LE M + G+ PD  T+ S++ G C 
Sbjct: 176 -DEMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGIPPDVVTFCSIISGLCK 234

Query: 311 VGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKI--LNVEEAMSLYRQIISNGVRQTV 368
             RID A ++F  M  +GC    ++Y+I+++   +   L+  + +  + Q +  G    V
Sbjct: 235 ANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVDEVLEHMQAMKAGCVMEV 294

Query: 369 ITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFH- 427
            T+N  +  L ++G+   A+ +   M      P+L +YN +IDGLCK+  V +A KL   
Sbjct: 295 YTHNAFIGALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRK 354

Query: 428 MLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQK-------------------- 467
           ML+    +  +  FN LI G CKAGRL  A +L  ++  K                    
Sbjct: 355 MLDSGCCKPDVIFFNTLISGFCKAGRLSQAHQLLIEMKAKNICVPDVVTYNTLIDGQSKF 414

Query: 468 ----------------GLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTF 511
                           G  P VVTY+ +I+G  + G  E+A      M   GC P+++T+
Sbjct: 415 GSLKQAKLLLQEMQAVGCKPNVVTYAALINGYAKHGMYEEAESLFDEMSAKGCFPDIITY 474

Query: 512 NTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
           NT++  F +    SK   +  ++        PD  T+ I++D   + E   +
Sbjct: 475 NTVLSAFSKAGMMSKAEGVYQQLKNKTSYCSPDAITYRILIDGYCRAEDTEQ 526



 Score =  212 bits (540), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 159/584 (27%), Positives = 269/584 (46%), Gaps = 88/584 (15%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CKSG  +L+ A+     M     +P + ++  L   + K R     I   ++++  G  P
Sbjct: 21  CKSG--DLDAAQALLQKMADAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEP 78

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           D +T N LI+       GLC+ NR+ +A  + + ++  G  P+ ITY TL+   CR   L
Sbjct: 79  DLVTYNSLIH-------GLCMANRMDDAGLVLQELVRNGFAPNHITYSTLVIWNCRRRRL 131

Query: 169 SVALRLHKKMV-------------------------------SGD--YENGLISKTNIFS 195
             A  L ++M+                                GD   E+G I   ++ +
Sbjct: 132 DQARGLIREMILRGSVCNLVVYIDCIFGFCEARCQSSRYECRDGDEMIESGRIP--DVVT 189

Query: 196 YSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEML 255
           Y+  I  LCK G +DK  E+  EM   GI P VV   ++I G C A   ++   +F  ML
Sbjct: 190 YNTFISGLCKAGKLDKGLEMLEEMDRGGIPPDVVTFCSIISGLCKANRIDDAFQVFKGML 249

Query: 256 DLGPRPNLLTFNVMIDCLCKGGKINEANGLLELM--IQRGLNPDRFTYNSLMDGYCLVGR 313
           + G  P+ LT+++M+D L +  +++  + +LE M  ++ G   + +T+N+ +   C  G+
Sbjct: 250 ERGCVPDSLTYSIMLDNLSRANRLDTVDEVLEHMQAMKAGCVMEVYTHNAFIGALCRSGK 309

Query: 314 IDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGV-RQTVITYN 372
              A+ I L M   G    ++SYN +I+G CK  NV++A  L R+++ +G  +  VI +N
Sbjct: 310 FPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCKPDVIFFN 369

Query: 373 TLLSGLFQAGQAGYAQKLFDEMKLYNV-EPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
           TL+SG  +AG+   A +L  EMK  N+  PD+ TYN LIDG  K   +++A  L   ++ 
Sbjct: 370 TLISGFCKAGRLSQAHQLLIEMKAKNICVPDVVTYNTLIDGQSKFGSLKQAKLLLQEMQA 429

Query: 432 NKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYS-------------- 477
              +  +  +  LI+G  K G  + A  LF ++  KG  P ++TY+              
Sbjct: 430 VGCKPNVVTYAALINGYAKHGMYEEAESLFDEMSAKGCFPDIITYNTVLSAFSKAGMMSK 489

Query: 478 -----------------------IMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTL 514
                                  I+I G CR    E+    L  M   G + +  T+N L
Sbjct: 490 AEGVYQQLKNKTSYCSPDAITYRILIDGYCRAEDTEQGLTLLQEMTARGWSCDSYTYNVL 549

Query: 515 MHGFLQNNKT-SKVVELLHKMAEPERNLVPDDTTFSIVVDLLAK 557
           +    +  +  SK + +  +M   +++ VP  + F+ +V L  +
Sbjct: 550 IAKLAETEEVPSKALAVYQQML--DQDCVPSASIFNSLVRLFLR 591



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 122/436 (27%), Positives = 214/436 (49%), Gaps = 16/436 (3%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
           P + ++N     + K    D  +    ++   G+ PD +T   +I+       GLC  NR
Sbjct: 185 PDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGIPPDVVTFCSIIS-------GLCKANR 237

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
           I +A  +FK M+  G  PD +TY  +++   R   L     + + M +   + G + +  
Sbjct: 238 IDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVDEVLEHMQA--MKAGCVME-- 293

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
           +++++  I +LC+ G    AK + L M   G  P ++    +I G C +GN ++   L  
Sbjct: 294 VYTHNAFIGALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSR 353

Query: 253 EMLDLGP-RPNLLTFNVMIDCLCKGGKINEANGLL-ELMIQRGLNPDRFTYNSLMDGYCL 310
           +MLD G  +P+++ FN +I   CK G++++A+ LL E+  +    PD  TYN+L+DG   
Sbjct: 354 KMLDSGCCKPDVIFFNTLISGFCKAGRLSQAHQLLIEMKAKNICVPDVVTYNTLIDGQSK 413

Query: 311 VGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVIT 370
            G +  A+ +   M + GCK  VV+Y  LINGY K    EEA SL+ ++ + G    +IT
Sbjct: 414 FGSLKQAKLLLQEMQAVGCKPNVVTYAALINGYAKHGMYEEAESLFDEMSAKGCFPDIIT 473

Query: 371 YNTLLSGLFQAGQAGYAQKLFDEM--KLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHM 428
           YNT+LS   +AG    A+ ++ ++  K     PD  TY ILIDG C+    ++ + L   
Sbjct: 474 YNTVLSAFSKAGMMSKAEGVYQQLKNKTSYCSPDAITYRILIDGYCRAEDTEQGLTLLQE 533

Query: 429 LEMNKFEFGIEIFNCLIDGLCKAGRL-DNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKG 487
           +    +      +N LI  L +   +   A  ++ ++  +  VP+   ++ ++    R G
Sbjct: 534 MTARGWSCDSYTYNVLIAKLAETEEVPSKALAVYQQMLDQDCVPSASIFNSLVRLFLRTG 593

Query: 488 KLEKANDFLLYMEKNG 503
            +  A   +  M + G
Sbjct: 594 DVNSARSMVQEMNEKG 609



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 119/410 (29%), Positives = 204/410 (49%), Gaps = 47/410 (11%)

Query: 191 TNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGL 250
            ++ +Y+ +ID LCK G +D A+ L  +M   G  P VV  T LI G C A    +    
Sbjct: 8   ASVVTYTTLIDGLCKSGDLDAAQALLQKMADAGCAPNVVTYTALIDGLCKARRPHDAIQT 67

Query: 251 FIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCL 310
              ML  G  P+L+T+N +I  LC   ++++A  +L+ +++ G  P+  TY++L+   C 
Sbjct: 68  VKRMLRSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQELVRNGFAPNHITYSTLVIWNCR 127

Query: 311 VGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYR-----QIISNGVR 365
             R+D AR +   M  +G    +V Y   I G+C+        S Y      ++I +G  
Sbjct: 128 RRRLDQARGLIREMILRGSVCNLVVYIDCIFGFCE---ARCQSSRYECRDGDEMIESGRI 184

Query: 366 QTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKL 425
             V+TYNT +SGL +AG+     ++ +EM    + PD+ T+  +I GLCK N + +A ++
Sbjct: 185 PDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGIPPDVVTFCSIISGLCKANRIDDAFQV 244

Query: 426 FH-MLE--------------------------------MNKFEFG--IEIF--NCLIDGL 448
           F  MLE                                M   + G  +E++  N  I  L
Sbjct: 245 FKGMLERGCVPDSLTYSIMLDNLSRANRLDTVDEVLEHMQAMKAGCVMEVYTHNAFIGAL 304

Query: 449 CKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCA-PN 507
           C++G+   A  +   + + G +P +++Y+ +I GLC+ G ++ A      M  +GC  P+
Sbjct: 305 CRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCKPD 364

Query: 508 VVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAK 557
           V+ FNTL+ GF +  + S+  +LL +M + +   VPD  T++ ++D  +K
Sbjct: 365 VIFFNTLISGFCKAGRLSQAHQLLIEM-KAKNICVPDVVTYNTLIDGQSK 413



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 104/355 (29%), Positives = 181/355 (50%), Gaps = 6/355 (1%)

Query: 219 MKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGK 278
           M   G + +VV  TTLI G C +G+ +    L  +M D G  PN++T+  +ID LCK  +
Sbjct: 1   MAANGYDASVVTYTTLIDGLCKSGDLDAAQALLQKMADAGCAPNVVTYTALIDGLCKARR 60

Query: 279 INEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNI 338
            ++A   ++ M++ G  PD  TYNSL+ G C+  R+D A  +   +   G     ++Y+ 
Sbjct: 61  PHDAIQTVKRMLRSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQELVRNGFAPNHITYST 120

Query: 339 LINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQA--GQAGYAQKLFDEMKL 396
           L+   C+   +++A  L R++I  G    ++ Y   + G  +A    + Y  +  DEM  
Sbjct: 121 LVIWNCRRRRLDQARGLIREMILRGSVCNLVVYIDCIFGFCEARCQSSRYECRDGDEMIE 180

Query: 397 YNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDN 456
               PD+ TYN  I GLCK   + + +++   ++       +  F  +I GLCKA R+D+
Sbjct: 181 SGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGIPPDVVTFCSIISGLCKANRIDD 240

Query: 457 AWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYME--KNGCAPNVVTFNTL 514
           A+++F  + ++G VP  +TYSIM+  L R  +L+  ++ L +M+  K GC   V T N  
Sbjct: 241 AFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVDEVLEHMQAMKAGCVMEVYTHNAF 300

Query: 515 MHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSK 569
           +    ++ K      +L  M E     +P+  +++ V+D L K     +   +S+
Sbjct: 301 IGALCRSGKFPLAKNILLGMIES--GSLPNLLSYNFVIDGLCKSGNVDDAWKLSR 353


>gi|413924892|gb|AFW64824.1| hypothetical protein ZEAMMB73_716034 [Zea mays]
          Length = 721

 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 147/528 (27%), Positives = 243/528 (46%), Gaps = 53/528 (10%)

Query: 72  SPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVEN 131
           +P +   N +   +     +D V + Y +++ + + P  +T N L++ F         E 
Sbjct: 199 APDVRDCNRVLRVLRDAARWDDVRAVYGEMLQLRVEPTIVTYNTLLDSF-------LKEG 251

Query: 132 RIKEATWLFKNM--IAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLIS 189
           R  EA+ L K M     G   + +T+  +I+   R G+L  A++L   M        L  
Sbjct: 252 RKDEASMLLKEMETQGGGFSLNDVTFNVVISFLAREGHLENAVKLVDSM-------RLSK 304

Query: 190 KTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNG 249
           K + F+Y+ +I +L + G V KA+ L +EM+  GI P VV    +IHG       E    
Sbjct: 305 KASSFTYNPLITALLERGFVRKAEALQMEMENEGIMPTVVTYNAIIHGLLKCEQAEAAQV 364

Query: 250 LFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYC 309
            F EM  +G  P+++T+N +++  CK G + EA  LL  + + GL P   TYN+L+DGYC
Sbjct: 365 KFAEMRAMGLLPDVITYNSLLNRYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYC 424

Query: 310 LVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVI 369
            +G +  AR +   M  +GC   V +Y IL+NG  K+ N+  A   + +++S G++    
Sbjct: 425 RLGDLAEARRLKEEMVEQGCFPDVCTYTILMNGSRKVRNLAMAREFFDEMLSKGLQPDCF 484

Query: 370 TYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHML 429
            YNT +           A +L + M L  + PD  TYN++IDGLCK   +++A +L   +
Sbjct: 485 AYNTRICAELTLSSTPMAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKRLKTKM 544

Query: 430 EMNKFEFGIEIFNCLI---------------------DGL--------------CKAGRL 454
             +  +     + CLI                     DGL              C+ G L
Sbjct: 545 VSDGLQPDCITYTCLIHAHCERGLLREARKLLNGMVSDGLQPSVVTYTILVHTCCRRGNL 604

Query: 455 DNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTL 514
            +A+  F K+   G+ P  +TY+++IH LC  G+   A      M + G APN  T+  L
Sbjct: 605 YSAYGWFRKMLDVGIEPNEITYNVLIHALCMTGRTPLAFRHFHEMLERGLAPNKYTYTLL 664

Query: 515 MHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYH 562
           + G  +    +  + L  +M   +  + PD  T + +     +   YH
Sbjct: 665 IDGNCREGNWADAIRLYFEMH--QNGIPPDYCTHNALFKGFDEGHMYH 710



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 101/338 (29%), Positives = 173/338 (51%), Gaps = 7/338 (2%)

Query: 223 GINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEA 282
           G+ P V  C  ++     A  W++V  ++ EML L   P ++T+N ++D   K G+ +EA
Sbjct: 197 GVAPDVRDCNRVLRVLRDAARWDDVRAVYGEMLQLRVEPTIVTYNTLLDSFLKEGRKDEA 256

Query: 283 NGLLELMIQR--GLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMH-SKGCKHTVVSYNIL 339
           + LL+ M  +  G + +  T+N ++      G ++ A ++  SM  SK  K +  +YN L
Sbjct: 257 SMLLKEMETQGGGFSLNDVTFNVVISFLAREGHLENAVKLVDSMRLSK--KASSFTYNPL 314

Query: 340 INGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNV 399
           I    +   V +A +L  ++ + G+  TV+TYN ++ GL +  QA  AQ  F EM+   +
Sbjct: 315 ITALLERGFVRKAEALQMEMENEGIMPTVVTYNAIIHGLLKCEQAEAAQVKFAEMRAMGL 374

Query: 400 EPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWE 459
            PD+ TYN L++  CK   ++EA+ L   L        +  +N LIDG C+ G L  A  
Sbjct: 375 LPDVITYNSLLNRYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGDLAEARR 434

Query: 460 LFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFL 519
           L  ++ ++G  P V TY+I+++G  +   L  A +F   M   G  P+   +NT +   L
Sbjct: 435 LKEEMVEQGCFPDVCTYTILMNGSRKVRNLAMAREFFDEMLSKGLQPDCFAYNTRICAEL 494

Query: 520 QNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAK 557
             + T    +L   M    + + PD  T+++++D L K
Sbjct: 495 TLSSTPMAFQLREVMM--LKGIYPDTVTYNVIIDGLCK 530



 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 74/270 (27%), Positives = 135/270 (50%), Gaps = 5/270 (1%)

Query: 286 LELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCK 345
             L+   G+ PD    N ++       R D  R ++  M     + T+V+YN L++ + K
Sbjct: 190 FRLVTCHGVAPDVRDCNRVLRVLRDAARWDDVRAVYGEMLQLRVEPTIVTYNTLLDSFLK 249

Query: 346 ILNVEEAMSLYRQIISNGVRQTV--ITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDL 403
               +EA  L +++ + G   ++  +T+N ++S L + G    A KL D M+L       
Sbjct: 250 EGRKDEASMLLKEMETQGGGFSLNDVTFNVVISFLAREGHLENAVKLVDSMRLSKKASSF 309

Query: 404 STYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHK 463
            TYN LI  L +   V++A  L   +E       +  +N +I GL K  + + A   F +
Sbjct: 310 -TYNPLITALLERGFVRKAEALQMEMENEGIMPTVVTYNAIIHGLLKCEQAEAAQVKFAE 368

Query: 464 LPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNK 523
           +   GL+P V+TY+ +++  C+ G L++A   L  + + G AP V+T+NTL+ G+ +   
Sbjct: 369 MRAMGLLPDVITYNSLLNRYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGD 428

Query: 524 TSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
            ++   L  +M   E+   PD  T++I+++
Sbjct: 429 LAEARRLKEEMV--EQGCFPDVCTYTILMN 456



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 65/238 (27%), Positives = 107/238 (44%), Gaps = 9/238 (3%)

Query: 353 MSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDG 412
           ++ +R +  +GV   V   N +L  L  A +    + ++ EM    VEP + TYN L+D 
Sbjct: 187 LAAFRLVTCHGVAPDVRDCNRVLRVLRDAARWDDVRAVYGEMLQLRVEPTIVTYNTLLDS 246

Query: 413 LCKNNCVQEAVKLFHMLEMNKFEFGIE--IFNCLIDGLCKAGRLDNAWELFH--KLPQKG 468
             K     EA  L   +E     F +    FN +I  L + G L+NA +L    +L +K 
Sbjct: 247 FLKEGRKDEASMLLKEMETQGGGFSLNDVTFNVVISFLAREGHLENAVKLVDSMRLSKKA 306

Query: 469 LVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVV 528
              +  TY+ +I  L  +G + KA    + ME  G  P VVT+N ++HG L+  +     
Sbjct: 307 ---SSFTYNPLITALLERGFVRKAEALQMEMENEGIMPTVVTYNAIIHGLLKCEQAEAAQ 363

Query: 529 ELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKSSYRACLYVTIFQPSSL 586
               +M      L+PD  T++ +++   K     E   +     RA L  T+   ++L
Sbjct: 364 VKFAEMR--AMGLLPDVITYNSLLNRYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTL 419



 Score = 68.9 bits (167), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 41/144 (28%), Positives = 74/144 (51%), Gaps = 13/144 (9%)

Query: 44  FLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVS 103
            +H +C+ G+  L EAR     M      P + ++ +L     +  +  +   ++RK++ 
Sbjct: 559 LIHAHCERGL--LREARKLLNGMVSDGLQPSVVTYTILVHTCCRRGNLYSAYGWFRKMLD 616

Query: 104 IGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFC 163
           +G+ P+ +T N+LI+        LC+  R   A   F  M+  G+ P+  TY  LI+G C
Sbjct: 617 VGIEPNEITYNVLIH-------ALCMTGRTPLAFRHFHEMLERGLAPNKYTYTLLIDGNC 669

Query: 164 RTGNLSVALRLHKKMVSGDYENGL 187
           R GN + A+RL+ +M    ++NG+
Sbjct: 670 REGNWADAIRLYFEM----HQNGI 689


>gi|225424122|ref|XP_002280156.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Vitis vinifera]
          Length = 718

 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 136/440 (30%), Positives = 229/440 (52%), Gaps = 15/440 (3%)

Query: 113 LNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVAL 172
           L++LI  +  K       + +++   +F  MI   + PDV     ++        +S A+
Sbjct: 167 LDLLIWVYSKK-------SMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAV 219

Query: 173 RLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCT 232
            +++ M  G++  G+  K  I +Y+ ++DS CK G V +  +L  EM+ RG  P  V   
Sbjct: 220 EVYRTM--GEF--GI--KPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYN 273

Query: 233 TLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQR 292
            LI+G    G +E+  GL  EML  G + +  T+N +I      G + EA  L E M+ +
Sbjct: 274 VLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLK 333

Query: 293 GLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEA 352
           G +P   TYNS + G C +GR+  A +    M +      VVSYN LI GYC++ N+ +A
Sbjct: 334 GASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKA 393

Query: 353 MSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDG 412
             L+ ++ S  +  T++TYNTLL GL + G+   AQ+L  EM    + PD+ TY IL++G
Sbjct: 394 FLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNG 453

Query: 413 LCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPT 472
            CK   +  A + F  +     E     +   I G  K G    A+ L  ++  KG  P 
Sbjct: 454 SCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPD 513

Query: 473 VVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLH 532
           ++ Y++++ GLC+ G LE+A++ L  M  +G  P+ VT+ +++H  L+N +  K  E+ +
Sbjct: 514 LIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFY 573

Query: 533 KMAEPERNLVPDDTTFSIVV 552
           +M    + L P   T+++++
Sbjct: 574 EML--SKGLTPSVVTYTVLI 591



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 137/488 (28%), Positives = 238/488 (48%), Gaps = 15/488 (3%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
           P I ++N L  +  K       +    ++   G  P+ +T N+LIN       GL  +  
Sbjct: 232 PTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLIN-------GLSKKGE 284

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
            ++A  L   M+  G++    TY  LI G+   G L+ AL L ++MV         +   
Sbjct: 285 FEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKG------ASPT 338

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
           + +Y+  I  LCK G +  A +   +M    + P VV   TLI+G+C  GN  +   LF 
Sbjct: 339 VATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFD 398

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
           E+  +   P ++T+N ++D LC+ G++  A  L   MI  G+ PD  TY  L++G C +G
Sbjct: 399 ELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMG 458

Query: 313 RIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYN 372
            +  A+E F  M  +G +    +Y   I G  K+ +   A SL  ++++ G    +I YN
Sbjct: 459 SLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYN 518

Query: 373 TLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMN 432
            ++ GL + G    A +L  +M    V PD  TY  +I    +N  +++  ++F+ +   
Sbjct: 519 VVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSK 578

Query: 433 KFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKA 492
                +  +  LI G    GRL+ A+  F ++ +KG++P V+TY+ +I+GLC+  ++++A
Sbjct: 579 GLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQA 638

Query: 493 NDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVV 552
            +F   M + G  PN  ++  L++         + + L  +M   +R + PD  T S ++
Sbjct: 639 YNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQML--DRGVQPDSCTHSALL 696

Query: 553 DLLAKDEK 560
             L KD K
Sbjct: 697 KQLGKDCK 704



 Score =  201 bits (512), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 133/491 (27%), Positives = 240/491 (48%), Gaps = 19/491 (3%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
           N  L   CK G   + +       M     +P   ++N+L   ++K   ++       ++
Sbjct: 238 NTLLDSYCKGG--KVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEM 295

Query: 102 VSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLING 161
           +  GL     T N LI  + NK         + EA  L + M+  G  P V TY + I G
Sbjct: 296 LKTGLKVSAYTYNPLIYGYFNK-------GMLAEALSLQEEMVLKGASPTVATYNSFIYG 348

Query: 162 FCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKG 221
            C+ G +S A++    M++    N L+   ++ SY+ +I   C+ G + KA  LF E++ 
Sbjct: 349 LCKLGRMSDAMQQLSDMLA----NNLLP--DVVSYNTLIYGYCRLGNLMKAFLLFDELRS 402

Query: 222 RGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINE 281
             + P +V   TL+ G C  G  E    L +EM++ G  P+++T+ ++++  CK G ++ 
Sbjct: 403 IYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSM 462

Query: 282 ANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLS--MHSKGCKHTVVSYNIL 339
           A    + M+  GL  D + Y + + G   +G  DT+R   L   M +KG    ++ YN++
Sbjct: 463 AQEFFDEMLHEGLELDSYAYATRIVGELKLG--DTSRAFSLQEEMLAKGFPPDLIIYNVV 520

Query: 340 INGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNV 399
           ++G CK+ N+EEA  L ++++S+GV    +TY +++    + G+    +++F EM    +
Sbjct: 521 VDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGL 580

Query: 400 EPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWE 459
            P + TY +LI G      ++ A   F  ++       +  +N LI+GLCK  R+D A+ 
Sbjct: 581 TPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYN 640

Query: 460 LFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFL 519
            F ++ +KG+ P   +Y+I+I+  C  G  ++A      M   G  P+  T + L+    
Sbjct: 641 FFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQMLDRGVQPDSCTHSALLKQLG 700

Query: 520 QNNKTSKVVEL 530
           ++ K   V +L
Sbjct: 701 KDCKLQAVRQL 711



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 107/389 (27%), Positives = 189/389 (48%), Gaps = 15/389 (3%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
           N F++  CK G   +++A      M      P + S+N L     +  +       + +L
Sbjct: 343 NSFIYGLCKLG--RMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDEL 400

Query: 102 VSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLING 161
            SI L P  +T N L++       GLC +  ++ A  L   MI  G+ PD++TY  L+NG
Sbjct: 401 RSIYLFPTIVTYNTLLD-------GLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNG 453

Query: 162 FCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKG 221
            C+ G+LS+A     +M+      GL  + + ++Y+  I    K G   +A  L  EM  
Sbjct: 454 SCKMGSLSMAQEFFDEML----HEGL--ELDSYAYATRIVGELKLGDTSRAFSLQEEMLA 507

Query: 222 RGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINE 281
           +G  P +++   ++ G C  GN EE + L  +M+  G  P+ +T+  +I    + G++ +
Sbjct: 508 KGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRK 567

Query: 282 ANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILIN 341
              +   M+ +GL P   TY  L+ G+   GR++ A   F  M  KG    V++YN LIN
Sbjct: 568 GREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLIN 627

Query: 342 GYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEP 401
           G CK+  +++A + + +++  G+     +Y  L++     G    A  L+ +M    V+P
Sbjct: 628 GLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQMLDRGVQP 687

Query: 402 DLSTYNILIDGLCKNNCVQEAVKLFHMLE 430
           D  T++ L+  L K+  +Q   +L  +L+
Sbjct: 688 DSCTHSALLKQLGKDCKLQAVRQLESLLD 716



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 73/273 (26%), Positives = 129/273 (47%), Gaps = 26/273 (9%)

Query: 30  QIAAVSSPETQLNEFLHENCK----------SGIINLNEARYFFGYMTHMQPS---PPIS 76
           ++ ++S  +   +E LHE  +           G + L +    F     M      P + 
Sbjct: 456 KMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLI 515

Query: 77  SFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEA 136
            +N++   + K  + +      +K+VS G++PD++T   +I+   + E G     R+++ 
Sbjct: 516 IYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIH--AHLENG-----RLRKG 568

Query: 137 TWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSY 196
             +F  M++ G+ P V+TY  LI+G    G L  A     +M     E G++   N+ +Y
Sbjct: 569 REIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEM----QEKGILP--NVITY 622

Query: 197 SIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLD 256
           + +I+ LCK   +D+A   F EM  +GI P     T LI+  C  GNW+E   L+ +MLD
Sbjct: 623 NSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQMLD 682

Query: 257 LGPRPNLLTFNVMIDCLCKGGKINEANGLLELM 289
            G +P+  T + ++  L K  K+     L  L+
Sbjct: 683 RGVQPDSCTHSALLKQLGKDCKLQAVRQLESLL 715



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 34/135 (25%), Positives = 73/135 (54%)

Query: 400 EPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWE 459
           E  +   ++LI    K + V++ + +F  +  ++    ++  N ++  L     +  A E
Sbjct: 161 EVSVKILDLLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVE 220

Query: 460 LFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFL 519
           ++  + + G+ PT+VTY+ ++   C+ GK+++  D L  M++ GCAPN VT+N L++G  
Sbjct: 221 VYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLS 280

Query: 520 QNNKTSKVVELLHKM 534
           +  +  +   L+ +M
Sbjct: 281 KKGEFEQAKGLIGEM 295


>gi|357142282|ref|XP_003572519.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 706

 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 140/511 (27%), Positives = 248/511 (48%), Gaps = 41/511 (8%)

Query: 58  EARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILI 117
           +A      MT     P   +F +L  +  ++   D  +    ++   G  P  +  N +I
Sbjct: 208 DAEELVEEMTRNDSPPDDLTFGMLIHSFCQSGLVDRAMGILDRMSKCGCTPGAIVYNEII 267

Query: 118 NCFGN----KE---------------------RGLCVENRIKEATWLFKNMIAFGVRPDV 152
           +CF      KE                     +GLC   R ++A  L   M+     PD 
Sbjct: 268 SCFAELGRVKEALHLFSCMPCKPDIFSYNAVLKGLCRAERWEDAGELITEMVRKDCSPDE 327

Query: 153 ITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKA 212
           +T+ T+I+  C  G +  AL +  +M           K + F+YS +I++  ++G V+ A
Sbjct: 328 VTFNTVISFLCHKGLVDCALEVVDQMPK------YGRKPDNFTYSALINAFSEQGCVEDA 381

Query: 213 KELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDC 272
            EL   M     +P  V   +++ G C  G WE+V  L  EM+     P+ + F ++IDC
Sbjct: 382 LELLRSMP---CSPNTVCYKSVLKGLCRDGQWEDVGQLIGEMVRNDCAPDEMVFGLIIDC 438

Query: 273 LCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHT 332
           LC+ G ++    +L+ +   G +PD   Y SL++G+   GR+D + ++F SM    CK  
Sbjct: 439 LCQRGLVDCGLEVLQEVPNYGCSPDVVMYTSLLNGFAEYGRVDDSLKLFKSMT---CKPN 495

Query: 333 VVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFD 392
            V+YN ++ G CK+   E+A  L  +++        +T++ L+S L Q G    A  +F+
Sbjct: 496 TVTYNYVLMGLCKVELWEDAGKLIDEMVGQECPPNEMTFSILISSLCQKGLVECAIDVFE 555

Query: 393 EMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAG 452
           +M++Y   P++  Y+ L +GL +  CV  A+KL + +           ++  + GLC+A 
Sbjct: 556 KMQMYGCTPNVIIYSTLNNGLSEKGCVDNALKLLNNMSCKADTI---CYSSALKGLCRAE 612

Query: 453 RLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFN 512
             ++A EL  ++ +K   P  VT+SI+I  LC++G +E A +    M K  C PN+V ++
Sbjct: 613 LWEDAGELIVEMFRKDCPPDEVTFSIIITNLCQQGFVEYATEVSDLMLKYECTPNIVIYS 672

Query: 513 TLMHGFLQNNKTSKVVELLHKMA-EPERNLV 542
           +L++GF ++      ++LL  M  EP+ ++ 
Sbjct: 673 SLINGFSEHGHLEDALKLLRSMPCEPDTSVT 703



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 109/439 (24%), Positives = 211/439 (48%), Gaps = 25/439 (5%)

Query: 125 RGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYE 184
           + LC   R+ +A  + +   A     D + + TL+ G+CR G L+ A R+ + + +    
Sbjct: 101 KKLCAAGRLADAEGVLRASEAA----DAVDHNTLVAGYCRAGRLADAERMLRSLAAS--- 153

Query: 185 NGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNW 244
                  ++ +Y+ +I   C+ G ++ A+ L   M      P      TL+ G C A  W
Sbjct: 154 ----GAADVVTYNTLIAGYCRGGRLEDARLLVASMPPA---PNSYAYNTLLKGLCSAKQW 206

Query: 245 EEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSL 304
            +   L  EM      P+ LTF ++I   C+ G ++ A G+L+ M + G  P    YN +
Sbjct: 207 GDAEELVEEMTRNDSPPDDLTFGMLIHSFCQSGLVDRAMGILDRMSKCGCTPGAIVYNEI 266

Query: 305 MDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGV 364
           +  +  +GR+  A  +F  M    CK  + SYN ++ G C+    E+A  L  +++    
Sbjct: 267 ISCFAELGRVKEALHLFSCMP---CKPDIFSYNAVLKGLCRAERWEDAGELITEMVRKDC 323

Query: 365 RQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVK 424
               +T+NT++S L   G    A ++ D+M  Y  +PD  TY+ LI+   +  CV++A++
Sbjct: 324 SPDEVTFNTVISFLCHKGLVDCALEVVDQMPKYGRKPDNFTYSALINAFSEQGCVEDALE 383

Query: 425 LFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLC 484
           L   +  +        +  ++ GLC+ G+ ++  +L  ++ +    P  + + ++I  LC
Sbjct: 384 LLRSMPCSP---NTVCYKSVLKGLCRDGQWEDVGQLIGEMVRNDCAPDEMVFGLIIDCLC 440

Query: 485 RKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPD 544
           ++G ++   + L  +   GC+P+VV + +L++GF +  +    ++L   M        P+
Sbjct: 441 QRGLVDCGLEVLQEVPNYGCSPDVVMYTSLLNGFAEYGRVDDSLKLFKSM-----TCKPN 495

Query: 545 DTTFSIVVDLLAKDEKYHE 563
             T++ V+  L K E + +
Sbjct: 496 TVTYNYVLMGLCKVELWED 514



 Score =  168 bits (425), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 112/411 (27%), Positives = 197/411 (47%), Gaps = 15/411 (3%)

Query: 125 RGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYE 184
           +GLC   +  +A  L + M      PD +T+G LI+ FC++G +  A+ +  +M      
Sbjct: 198 KGLCSAKQWGDAEELVEEMTRNDSPPDDLTFGMLIHSFCQSGLVDRAMGILDRMSKCGCT 257

Query: 185 NGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNW 244
            G I       Y+ II    + G V +A  LF  M  +   P +     ++ G C A  W
Sbjct: 258 PGAI------VYNEIISCFAELGRVKEALHLFSCMPCK---PDIFSYNAVLKGLCRAERW 308

Query: 245 EEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSL 304
           E+   L  EM+     P+ +TFN +I  LC  G ++ A  +++ M + G  PD FTY++L
Sbjct: 309 EDAGELITEMVRKDCSPDEVTFNTVISFLCHKGLVDCALEVVDQMPKYGRKPDNFTYSAL 368

Query: 305 MDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGV 364
           ++ +   G ++ A E+  SM    C    V Y  ++ G C+    E+   L  +++ N  
Sbjct: 369 INAFSEQGCVEDALELLRSMP---CSPNTVCYKSVLKGLCRDGQWEDVGQLIGEMVRNDC 425

Query: 365 RQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVK 424
               + +  ++  L Q G      ++  E+  Y   PD+  Y  L++G  +   V +++K
Sbjct: 426 APDEMVFGLIIDCLCQRGLVDCGLEVLQEVPNYGCSPDVVMYTSLLNGFAEYGRVDDSLK 485

Query: 425 LFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLC 484
           LF  +           +N ++ GLCK    ++A +L  ++  +   P  +T+SI+I  LC
Sbjct: 486 LFKSMTCKP---NTVTYNYVLMGLCKVELWEDAGKLIDEMVGQECPPNEMTFSILISSLC 542

Query: 485 RKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMA 535
           +KG +E A D    M+  GC PNV+ ++TL +G  +       ++LL+ M+
Sbjct: 543 QKGLVECAIDVFEKMQMYGCTPNVIIYSTLNNGLSEKGCVDNALKLLNNMS 593



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 97/357 (27%), Positives = 162/357 (45%), Gaps = 19/357 (5%)

Query: 207 GLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTF 266
           G +D A +L   M      PAVV CT LI   C AG   +  G+    L      + +  
Sbjct: 75  GDLDAALQLVGSMSE---PPAVVPCTLLIKKLCAAGRLADAEGV----LRASEAADAVDH 127

Query: 267 NVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHS 326
           N ++   C+ G++ +A  +L  +   G   D  TYN+L+ GYC  GR++ AR +  SM  
Sbjct: 128 NTLVAGYCRAGRLADAERMLRSLAASGAA-DVVTYNTLIAGYCRGGRLEDARLLVASMPP 186

Query: 327 KGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGY 386
               +   +YN L+ G C      +A  L  ++  N      +T+  L+    Q+G    
Sbjct: 187 APNSY---AYNTLLKGLCSAKQWGDAEELVEEMTRNDSPPDDLTFGMLIHSFCQSGLVDR 243

Query: 387 AQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLID 446
           A  + D M      P    YN +I    +   V+EA+ LF  +      F    +N ++ 
Sbjct: 244 AMGILDRMSKCGCTPGAIVYNEIISCFAELGRVKEALHLFSCMPCKPDIFS---YNAVLK 300

Query: 447 GLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAP 506
           GLC+A R ++A EL  ++ +K   P  VT++ +I  LC KG ++ A + +  M K G  P
Sbjct: 301 GLCRAERWEDAGELITEMVRKDCSPDEVTFNTVISFLCHKGLVDCALEVVDQMPKYGRKP 360

Query: 507 NVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
           +  T++ L++ F +       +ELL  M        P+   +  V+  L +D ++ +
Sbjct: 361 DNFTYSALINAFSEQGCVEDALELLRSMP-----CSPNTVCYKSVLKGLCRDGQWED 412



 Score = 95.9 bits (237), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 76/311 (24%), Positives = 146/311 (46%), Gaps = 21/311 (6%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           C+ G     +     G M     +P    F L+   + +    D  +   +++ + G  P
Sbjct: 405 CRDG--QWEDVGQLIGEMVRNDCAPDEMVFGLIIDCLCQRGLVDCGLEVLQEVPNYGCSP 462

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           D +    L+N F   E G     R+ ++  LFK+M     +P+ +TY  ++ G C+    
Sbjct: 463 DVVMYTSLLNGFA--EYG-----RVDDSLKLFKSMTC---KPNTVTYNYVLMGLCKVELW 512

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
             A +L  +MV      G     N  ++SI+I SLC++GLV+ A ++F +M+  G  P V
Sbjct: 513 EDAGKLIDEMV------GQECPPNEMTFSILISSLCQKGLVECAIDVFEKMQMYGCTPNV 566

Query: 229 VVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLEL 288
           ++ +TL +G    G    V+     + ++  + + + ++  +  LC+     +A  L+  
Sbjct: 567 IIYSTLNNGLSEKGC---VDNALKLLNNMSCKADTICYSSALKGLCRAELWEDAGELIVE 623

Query: 289 MIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILN 348
           M ++   PD  T++ ++   C  G ++ A E+   M    C   +V Y+ LING+ +  +
Sbjct: 624 MFRKDCPPDEVTFSIIITNLCQQGFVEYATEVSDLMLKYECTPNIVIYSSLINGFSEHGH 683

Query: 349 VEEAMSLYRQI 359
           +E+A+ L R +
Sbjct: 684 LEDALKLLRSM 694


>gi|302825350|ref|XP_002994298.1| hypothetical protein SELMODRAFT_138440 [Selaginella moellendorffii]
 gi|300137829|gb|EFJ04642.1| hypothetical protein SELMODRAFT_138440 [Selaginella moellendorffii]
          Length = 577

 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 116/363 (31%), Positives = 200/363 (55%), Gaps = 8/363 (2%)

Query: 196 YSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEML 255
           Y+ +I+  CK G VD+A EL  EMK RG+   V++ +TLI G C  G  +E    F  M 
Sbjct: 2   YTTVINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSMG 61

Query: 256 DLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQR-----GLNPDRFTYNSLMDGYCL 310
           +    PN++T+N +++ LCK  +I+E   L + M +R     G  PD  +Y++++D  C 
Sbjct: 62  E-ECSPNVITYNTVVNGLCKANRIDEGLELFDDMEKRYEASHGCEPDVISYSTVIDALCK 120

Query: 311 VGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVIT 370
             R+D A E F  M + GC   VV+Y+ LI+G CK+  V+EA SL  Q+    +    + 
Sbjct: 121 AQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRVDEAYSLLMQLKGEDMVPRAMY 180

Query: 371 YNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLE 430
           YN +++G  + G+     +L   MK      ++  +N ++  L KN+  ++A + F  L 
Sbjct: 181 YNAVVNGFKRQGKPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLL 240

Query: 431 MNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLE 490
            +  +  +  +N  + GLCKAG++D A+ +  ++ +  + P V+TYS +I G C+ G+++
Sbjct: 241 KSGKKPNVVTYNVAVHGLCKAGKVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMD 300

Query: 491 KANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSI 550
           KA+D    M  + C P+ VTF TL+HGF ++ K+ +   +   M       +P   T+++
Sbjct: 301 KADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNA--GFIPGLQTYNV 358

Query: 551 VVD 553
           ++D
Sbjct: 359 LMD 361



 Score =  205 bits (521), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 128/470 (27%), Positives = 227/470 (48%), Gaps = 9/470 (1%)

Query: 78  FNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEAT 137
           +  +     K    D       ++   G+  D L  + LI       +GLC + RI EA 
Sbjct: 2   YTTVINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLI-------QGLCRKGRIDEAL 54

Query: 138 WLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYS 197
             FK+M      P+VITY T++NG C+   +   L L   M    YE     + ++ SYS
Sbjct: 55  EQFKSM-GEECSPNVITYNTVVNGLCKANRIDEGLELFDDM-EKRYEASHGCEPDVISYS 112

Query: 198 IIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDL 257
            +ID+LCK   VDKA E F  M+  G  P VV  ++LI G C     +E   L +++   
Sbjct: 113 TVIDALCKAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRVDEAYSLLMQLKGE 172

Query: 258 GPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTA 317
              P  + +N +++   + GK +E   LL  M ++G   +   +N+++         + A
Sbjct: 173 DMVPRAMYYNAVVNGFKRQGKPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKA 232

Query: 318 REIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSG 377
            + F  +   G K  VV+YN+ ++G CK   V+EA  +  +++ + V   VITY++++ G
Sbjct: 233 CQFFERLLKSGKKPNVVTYNVAVHGLCKAGKVDEAYRILLEMVESKVTPDVITYSSIIDG 292

Query: 378 LFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFG 437
             +AG+   A  +F  M ++   P   T+  L+ G  ++   +EA ++   +    F  G
Sbjct: 293 FCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPG 352

Query: 438 IEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLL 497
           ++ +N L+D +C A  +++A E++HK+ +K   P   TY+ +I  LCR  ++++A +FL 
Sbjct: 353 LQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDANTYAPLIQCLCRARRVDEAKEFLD 412

Query: 498 YMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTT 547
            ME +   PN    + L+    +  +  +   +L  + E  +   PD+  
Sbjct: 413 VMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVEICKAGEPDEAV 462



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 131/491 (26%), Positives = 232/491 (47%), Gaps = 40/491 (8%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFY-----RKLVS 103
           C+ G   ++EA   F  M   + SP + ++N +   + K    D  +  +     R   S
Sbjct: 45  CRKG--RIDEALEQFKSMGE-ECSPNVITYNTVVNGLCKANRIDEGLELFDDMEKRYEAS 101

Query: 104 IGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFC 163
            G  PD ++ + +I+        LC   R+ +A   FK M A G  P+V+TY +LI+G C
Sbjct: 102 HGCEPDVISYSTVID-------ALCKAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLC 154

Query: 164 RTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRG 223
           +   +  A  L  ++   D    ++ +     Y+ +++   ++G   +  EL L MK +G
Sbjct: 155 KVDRVDEAYSLLMQLKGED----MVPRA--MYYNAVVNGFKRQGKPSECLELLLHMKEKG 208

Query: 224 INPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEAN 283
               ++    ++H        E+    F  +L  G +PN++T+NV +  LCK GK++EA 
Sbjct: 209 FGINIIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGKVDEAY 268

Query: 284 GLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGY 343
            +L  M++  + PD  TY+S++DG+C  GR+D A ++F  M    C    V++  L++G+
Sbjct: 269 RILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGF 328

Query: 344 CKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDL 403
            +     EA  ++  +++ G    + TYN L+  +  A     A +++ +MK    +PD 
Sbjct: 329 SEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDA 388

Query: 404 STYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCK------------- 450
           +TY  LI  LC+   V EA +   ++E +       I + L++ LCK             
Sbjct: 389 NTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDN 448

Query: 451 ------AGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGC 504
                 AG  D A E+  ++  KG+ P   TY  ++  LC   +++ A      M   GC
Sbjct: 449 VVEICKAGEPDEAVEVIEQMVLKGVRPDEATYVAVLRSLCGLDRVDSAIAEFEKMASRGC 508

Query: 505 APNVVTFNTLM 515
           AP +VT+  L+
Sbjct: 509 APGLVTYTLLI 519



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 117/414 (28%), Positives = 208/414 (50%), Gaps = 14/414 (3%)

Query: 155 YGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKE 214
           Y T+INGFC+ G +  A  L  +M     E G+  K ++  +S +I  LC++G +D+A E
Sbjct: 2   YTTVINGFCKAGQVDQAFELLDEM----KERGV--KMDVLLHSTLIQGLCRKGRIDEALE 55

Query: 215 LFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEM-----LDLGPRPNLLTFNVM 269
            F  M G   +P V+   T+++G C A   +E   LF +M        G  P++++++ +
Sbjct: 56  QFKSM-GEECSPNVITYNTVVNGLCKANRIDEGLELFDDMEKRYEASHGCEPDVISYSTV 114

Query: 270 IDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGC 329
           ID LCK  ++++A    + M   G  P+  TY+SL+DG C V R+D A  + + +  +  
Sbjct: 115 IDALCKAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRVDEAYSLLMQLKGEDM 174

Query: 330 KHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQK 389
               + YN ++NG+ +     E + L   +   G    +I +N +L  L++  +   A +
Sbjct: 175 VPRAMYYNAVVNGFKRQGKPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQ 234

Query: 390 LFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLC 449
            F+ +     +P++ TYN+ + GLCK   V EA ++   +  +K    +  ++ +IDG C
Sbjct: 235 FFERLLKSGKKPNVVTYNVAVHGLCKAGKVDEAYRILLEMVESKVTPDVITYSSIIDGFC 294

Query: 450 KAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVV 509
           KAGR+D A ++F ++     +P  VT+  ++HG     K  +A      M   G  P + 
Sbjct: 295 KAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQ 354

Query: 510 TFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
           T+N LM      +     +E+ HKM   +R   PD  T++ ++  L +  +  E
Sbjct: 355 TYNVLMDCVCGADSVESALEIYHKMKRKKRQ--PDANTYAPLIQCLCRARRVDE 406



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 111/455 (24%), Positives = 192/455 (42%), Gaps = 52/455 (11%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CK+    +++A  +F  M  +  +P + +++ L   + K    D   S   +L    ++P
Sbjct: 119 CKAQ--RVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRVDEAYSLLMQLKGEDMVP 176

Query: 109 DFLTLNILINCFGN--------------KERGLCVE----NRIKEATW----------LF 140
             +  N ++N F                KE+G  +     N +  A W           F
Sbjct: 177 RAMYYNAVVNGFKRQGKPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFF 236

Query: 141 KNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIII 200
           + ++  G +P+V+TY   ++G C+ G +  A R+  +MV            ++ +YS II
Sbjct: 237 ERLLKSGKKPNVVTYNVAVHGLCKAGKVDEAYRILLEMVESKV------TPDVITYSSII 290

Query: 201 DSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPR 260
           D  CK G +DKA ++F  M      P  V   TL+HGF       E   +  +M++ G  
Sbjct: 291 DGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFI 350

Query: 261 PNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREI 320
           P L T+NV++DC+C    +  A  +   M ++   PD  TY  L+   C   R+D A+E 
Sbjct: 351 PGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDANTYAPLIQCLCRARRVDEAKEF 410

Query: 321 FLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQ 380
              M +          + L+   CK   V+EA S+   ++                 + +
Sbjct: 411 LDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVE----------------ICK 454

Query: 381 AGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEI 440
           AG+   A ++ ++M L  V PD +TY  ++  LC  + V  A+  F  +       G+  
Sbjct: 455 AGEPDEAVEVIEQMVLKGVRPDEATYVAVLRSLCGLDRVDSAIAEFEKMASRGCAPGLVT 514

Query: 441 FNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVT 475
           +  LI   C A   D+A+ +F  +   G  P   T
Sbjct: 515 YTLLIGEACSADMADDAFRIFEAMVAAGFTPQAQT 549



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 91/362 (25%), Positives = 155/362 (42%), Gaps = 67/362 (18%)

Query: 75  ISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIK 134
           I  FN +  A+ KN   +    F+ +L+  G  P+ +T N+ ++       GLC   ++ 
Sbjct: 213 IIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVH-------GLCKAGKVD 265

Query: 135 EATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVA----------------------- 171
           EA  +   M+   V PDVITY ++I+GFC+ G +  A                       
Sbjct: 266 EAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLL 325

Query: 172 ------------LRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEM 219
                        R+H+ MV+  +  GL +      Y++++D +C    V+ A E++ +M
Sbjct: 326 HGFSEHKKSREAFRVHEDMVNAGFIPGLQT------YNVLMDCVCGADSVESALEIYHKM 379

Query: 220 KGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKI 279
           K +   P       LI   C A   +E       M      PN    + +++ LCK G++
Sbjct: 380 KRKKRQPDANTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHALVEVLCKQGEV 439

Query: 280 NEANGLL-------------------ELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREI 320
           +EA  +L                   E M+ +G+ PD  TY +++   C + R+D+A   
Sbjct: 440 DEACSVLDNVVEICKAGEPDEAVEVIEQMVLKGVRPDEATYVAVLRSLCGLDRVDSAIAE 499

Query: 321 FLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQ 380
           F  M S+GC   +V+Y +LI   C     ++A  ++  +++ G      T  TL S L  
Sbjct: 500 FEKMASRGCAPGLVTYTLLIGEACSADMADDAFRIFEAMVAAGFTPQAQTMRTLSSCLRD 559

Query: 381 AG 382
           AG
Sbjct: 560 AG 561



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 42/124 (33%), Positives = 79/124 (63%), Gaps = 4/124 (3%)

Query: 440 IFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYM 499
           ++  +I+G CKAG++D A+EL  ++ ++G+   V+ +S +I GLCRKG++++A +    M
Sbjct: 1   MYTTVINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSM 60

Query: 500 EKNGCAPNVVTFNTLMHGFLQNNKTSKVVEL---LHKMAEPERNLVPDDTTFSIVVDLLA 556
            +  C+PNV+T+NT+++G  + N+  + +EL   + K  E      PD  ++S V+D L 
Sbjct: 61  GEE-CSPNVITYNTVVNGLCKANRIDEGLELFDDMEKRYEASHGCEPDVISYSTVIDALC 119

Query: 557 KDEK 560
           K ++
Sbjct: 120 KAQR 123


>gi|357154512|ref|XP_003576808.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g79540-like [Brachypodium distachyon]
          Length = 801

 Score =  212 bits (539), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 151/553 (27%), Positives = 255/553 (46%), Gaps = 30/553 (5%)

Query: 10  LFSSETVSKVKLSSLFKSPRQIAAVSSPETQLNEFLHENCKSGIINLNEARYFFGYMTHM 69
           L +SE  +     +L  +  + A + +P       +  +  +G     EA   F  M   
Sbjct: 118 LLASEPDAVAMFDALADA--RAAGLPAPSAAFRALVLAHSSAG--RHQEAVEAFSRMGDF 173

Query: 70  QPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCV 129
              P    +N +F  +         ++ Y ++VS G LP+  T  +L++       GLC 
Sbjct: 174 DCRPTAFVYNAVFQVLVDRGVILLALALYNRMVSSGCLPNSTTYIVLMD-------GLCK 226

Query: 130 ENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLIS 189
                +A  +F  M+  G+ PDV  Y  L++  C  G +  A RL   M     ENG   
Sbjct: 227 RGMAVDALKMFDEMLERGIVPDVKIYTVLLSSLCNEGRIEDAGRLLCSM----KENG--C 280

Query: 190 KTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNG 249
             +  +Y++ +  LCK G VD+A   F  ++  G    ++  + LI G   AG ++E   
Sbjct: 281 PPDEVTYTVFLSGLCKAGRVDEAFHRFELLQDGGFTLGLIGYSCLIDGLFQAGRFDEGLS 340

Query: 250 LFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYC 309
            + EML     P++  + ++I    + G+  +A  LL+ M  +G  PD F YN+L+    
Sbjct: 341 YYTEMLGKSISPDITLYTILIRRFAEAGRTKDAFLLLDEMKDKGFVPDTFCYNTLLKALF 400

Query: 310 LVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVI 369
            VG ID A+ +   M          ++NI+I G CK   +++AM ++ ++  +G   TV+
Sbjct: 401 DVGNIDRAQSLMSEMLQNNVVLDSTTHNIMICGLCKKGLIDKAMQVFDEMGEHGCHPTVM 460

Query: 370 TYNTLLSGLFQAGQAGYAQKLFDEMKL-------------YNVEPDLSTYNILIDGLCKN 416
           TYN L+ GL++AG    A+ LF +M++              N   D  +   L+DG+C++
Sbjct: 461 TYNALIDGLYRAGMLEEARMLFHKMEMGNNPSLFLRLTLGANQVRDTESLRKLVDGMCQS 520

Query: 417 NCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTY 476
             V +A KL   +  +     +  +N LI+GLCKA  LD A  LF +L  KG+ P  +TY
Sbjct: 521 GQVLKAYKLLRGIIESGVVPDVVTYNTLINGLCKAKNLDGALRLFKELQLKGISPDEITY 580

Query: 477 SIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAE 536
             +I GL R  +   A      + ++G  P++  +NT+M    +  K S+ + L      
Sbjct: 581 GTLIDGLWRAHRENDATMLFQNILRSGGFPSLPIYNTMMRSLCRMKKLSQAINLWLDYLP 640

Query: 537 PERNLVPDDTTFS 549
            + NL P+D   +
Sbjct: 641 KKYNLSPEDEVIA 653



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 135/457 (29%), Positives = 223/457 (48%), Gaps = 23/457 (5%)

Query: 132 RIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKT 191
           R +EA   F  M  F  RP    Y  +       G + +AL L+ +MVS    +G +   
Sbjct: 159 RHQEAVEAFSRMGDFDCRPTAFVYNAVFQVLVDRGVILLALALYNRMVS----SGCLP-- 212

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
           N  +Y +++D LCK G+   A ++F EM  RGI P V + T L+   C  G  E+   L 
Sbjct: 213 NSTTYIVLMDGLCKRGMAVDALKMFDEMLERGIVPDVKIYTVLLSSLCNEGRIEDAGRLL 272

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
             M + G  P+ +T+ V +  LCK G+++EA    EL+   G       Y+ L+DG    
Sbjct: 273 CSMKENGCPPDEVTYTVFLSGLCKAGRVDEAFHRFELLQDGGFTLGLIGYSCLIDGLFQA 332

Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
           GR D     +  M  K     +  Y ILI  + +    ++A  L  ++   G       Y
Sbjct: 333 GRFDEGLSYYTEMLGKSISPDITLYTILIRRFAEAGRTKDAFLLLDEMKDKGFVPDTFCY 392

Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
           NTLL  LF  G    AQ L  EM   NV  D +T+NI+I GLCK   + +A+++F  +  
Sbjct: 393 NTLLKALFDVGNIDRAQSLMSEMLQNNVVLDSTTHNIMICGLCKKGLIDKAMQVFDEMGE 452

Query: 432 NKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVV------------TYSI- 478
           +     +  +N LIDGL +AG L+ A  LFHK+ + G  P++             T S+ 
Sbjct: 453 HGCHPTVMTYNALIDGLYRAGMLEEARMLFHKM-EMGNNPSLFLRLTLGANQVRDTESLR 511

Query: 479 -MIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEP 537
            ++ G+C+ G++ KA   L  + ++G  P+VVT+NTL++G  +       + L  ++   
Sbjct: 512 KLVDGMCQSGQVLKAYKLLRGIIESGVVPDVVTYNTLINGLCKAKNLDGALRLFKELQ-- 569

Query: 538 ERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKSSYRA 574
            + + PD+ T+  ++D L +  + ++ + + ++  R+
Sbjct: 570 LKGISPDEITYGTLIDGLWRAHRENDATMLFQNILRS 606



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 105/395 (26%), Positives = 159/395 (40%), Gaps = 49/395 (12%)

Query: 189 SKTNIFSYSIIIDSLCKEGLVDKAKELFL--------------EMKGRGINPAVVVCTTL 234
           S+  +F YS I   L    L  +A  + L              + +  G+         L
Sbjct: 91  SRIRLFLYSAIKRRLRSPLLYSRAVSVLLASEPDAVAMFDALADARAAGLPAPSAAFRAL 150

Query: 235 IHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGL 294
           +     AG  +E    F  M D   RP    +N +   L   G I  A  L   M+  G 
Sbjct: 151 VLAHSSAGRHQEAVEAFSRMGDFDCRPTAFVYNAVFQVLVDRGVILLALALYNRMVSSGC 210

Query: 295 NPDRFTYNSLMDGYCLV-----------------------------------GRIDTARE 319
            P+  TY  LMDG C                                     GRI+ A  
Sbjct: 211 LPNSTTYIVLMDGLCKRGMAVDALKMFDEMLERGIVPDVKIYTVLLSSLCNEGRIEDAGR 270

Query: 320 IFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLF 379
           +  SM   GC    V+Y + ++G CK   V+EA   +  +   G    +I Y+ L+ GLF
Sbjct: 271 LLCSMKENGCPPDEVTYTVFLSGLCKAGRVDEAFHRFELLQDGGFTLGLIGYSCLIDGLF 330

Query: 380 QAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIE 439
           QAG+       + EM   ++ PD++ Y ILI    +    ++A  L   ++   F     
Sbjct: 331 QAGRFDEGLSYYTEMLGKSISPDITLYTILIRRFAEAGRTKDAFLLLDEMKDKGFVPDTF 390

Query: 440 IFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYM 499
            +N L+  L   G +D A  L  ++ Q  +V    T++IMI GLC+KG ++KA      M
Sbjct: 391 CYNTLLKALFDVGNIDRAQSLMSEMLQNNVVLDSTTHNIMICGLCKKGLIDKAMQVFDEM 450

Query: 500 EKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKM 534
            ++GC P V+T+N L+ G  +     +   L HKM
Sbjct: 451 GEHGCHPTVMTYNALIDGLYRAGMLEEARMLFHKM 485



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 83/294 (28%), Positives = 134/294 (45%), Gaps = 3/294 (1%)

Query: 259 PRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAR 318
           P P+   F  ++      G+  EA      M      P  F YN++       G I  A 
Sbjct: 141 PAPSA-AFRALVLAHSSAGRHQEAVEAFSRMGDFDCRPTAFVYNAVFQVLVDRGVILLAL 199

Query: 319 EIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGL 378
            ++  M S GC     +Y +L++G CK     +A+ ++ +++  G+   V  Y  LLS L
Sbjct: 200 ALYNRMVSSGCLPNSTTYIVLMDGLCKRGMAVDALKMFDEMLERGIVPDVKIYTVLLSSL 259

Query: 379 FQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGI 438
              G+   A +L   MK     PD  TY + + GLCK   V EA   F +L+   F  G+
Sbjct: 260 CNEGRIEDAGRLLCSMKENGCPPDEVTYTVFLSGLCKAGRVDEAFHRFELLQDGGFTLGL 319

Query: 439 EIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLY 498
             ++CLIDGL +AGR D     + ++  K + P +  Y+I+I      G+ + A   L  
Sbjct: 320 IGYSCLIDGLFQAGRFDEGLSYYTEMLGKSISPDITLYTILIRRFAEAGRTKDAFLLLDE 379

Query: 499 MEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVV 552
           M+  G  P+   +NTL+          +   L+ +M   + N+V D TT +I++
Sbjct: 380 MKDKGFVPDTFCYNTLLKALFDVGNIDRAQSLMSEML--QNNVVLDSTTHNIMI 431



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 102/411 (24%), Positives = 161/411 (39%), Gaps = 89/411 (21%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
           P    +N L  A+    + D   S   +++   ++ D  T NI+I C      GLC +  
Sbjct: 387 PDTFCYNTLLKALFDVGNIDRAQSLMSEMLQNNVVLDSTTHNIMI-C------GLCKKGL 439

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTG----------------NLSVALRLH- 175
           I +A  +F  M   G  P V+TY  LI+G  R G                N S+ LRL  
Sbjct: 440 IDKAMQVFDEMGEHGCHPTVMTYNALIDGLYRAGMLEEARMLFHKMEMGNNPSLFLRLTL 499

Query: 176 -----------KKMVSGDYENGLISKT--------------NIFSYSIIIDSLCKEGLVD 210
                      +K+V G  ++G + K               ++ +Y+ +I+ LCK   +D
Sbjct: 500 GANQVRDTESLRKLVDGMCQSGQVLKAYKLLRGIIESGVVPDVVTYNTLINGLCKAKNLD 559

Query: 211 KAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMI 270
            A  LF E++ +GI+P  +   TLI G   A    +   LF  +L  G  P+L  +N M+
Sbjct: 560 GALRLFKELQLKGISPDEITYGTLIDGLWRAHRENDATMLFQNILRSGGFPSLPIYNTMM 619

Query: 271 DCLCKGGKINEA-----------------------------NGLLELMIQR--------- 292
             LC+  K+++A                             +G L+  ++          
Sbjct: 620 RSLCRMKKLSQAINLWLDYLPKKYNLSPEDEVIANARKCFEDGFLDETVKELIKIDQVYG 679

Query: 293 GLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEA 352
            LNP+ +T   +  G C V +ID A  IF  +   G   T     +LIN  C   N+  A
Sbjct: 680 SLNPNPYTIWVI--GLCQVRKIDDALRIFHILEEFGIVVTPACCALLINYLCWDRNLNAA 737

Query: 353 MSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDL 403
           + +    +S     +    N LL  L    +   AQ L   M L   + D+
Sbjct: 738 VDIMMYTLSKRFIVSQPVGNRLLRSLCIRYRRHDAQALSWRMHLVGYDMDV 788


>gi|242063942|ref|XP_002453260.1| hypothetical protein SORBIDRAFT_04g002660 [Sorghum bicolor]
 gi|241933091|gb|EES06236.1| hypothetical protein SORBIDRAFT_04g002660 [Sorghum bicolor]
          Length = 866

 Score =  212 bits (539), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 152/564 (26%), Positives = 259/564 (45%), Gaps = 55/564 (9%)

Query: 29  RQIAAVSSPETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISS--FNLLFGAVA 86
           R I +   P   L   L  +C S ++ L  A   F  +  +  +PP ++  +N L  A  
Sbjct: 65  RHILSFPDPSPHLLALL--SC-SDVLPLRLAIPAFRSLRALTSAPPPTTPVYNRLILAAL 121

Query: 87  KNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAF 146
           +    D V + Y+ L+  G  PD  T N+L+       + LC   R++ A  +F  M A 
Sbjct: 122 RESRLDLVEALYKDLLLSGAQPDVFTRNLLL-------QALCDAGRMELAQRVFDAMPAR 174

Query: 147 GVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKE 206
               +  ++G L  G+CR G    AL++   M S           N+   + ++   CKE
Sbjct: 175 ----NEFSFGILARGYCRAGRSIDALKVLDGMPS----------MNLVVCNTVVAGFCKE 220

Query: 207 GLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLG----PRPN 262
           GLV++A+ L   M+ +G+ P VV     I   C AG   +   +F +M +      PRP+
Sbjct: 221 GLVEEAERLVERMRVQGLAPNVVTFNARISALCKAGRVLDAYRIFQDMQEDWQHGLPRPD 280

Query: 263 LLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFL 322
            +TF+VM+   C  G ++EA  L+++M   G      +YN  + G    GR+  A+E+  
Sbjct: 281 QVTFDVMLSGFCDAGFVDEARVLVDIMRCGGFLRRVESYNRWLSGLVRNGRVGEAQELLR 340

Query: 323 SMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAG 382
            M  +G +    +YNI+++G CK     +A  +   I S  +   V+TY +LL      G
Sbjct: 341 EMAHEGIQPNSYTYNIIVSGLCKEGKAFDARRVENFIRSGVMSPDVVTYTSLLHAYCSKG 400

Query: 383 QAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFN 442
               A ++ DEM      P+  TYN+L+  L +     EA +L   +    +       N
Sbjct: 401 NIAAANRILDEMAQKGCAPNSFTYNVLLQSLWRAGRTTEAERLLERMNEKGYSLDTAGCN 460

Query: 443 CLIDGLCKAGRLDNAWELFHKLPQKG-----------------------LVPTVVTYSIM 479
            +IDGLC+  RLD A ++   + ++G                        +P  +TYSI+
Sbjct: 461 IIIDGLCRNSRLDVAMDIVDGMWEEGSGALGRLGNSFLSVVSDSSISQRCLPDQITYSIL 520

Query: 480 IHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPER 539
           I  LC++G+ ++A   LL M     +P+ V ++T +HG+ ++ KTS  +++L  M +   
Sbjct: 521 ISALCKEGRFDEAKKKLLEMIVKDISPDSVIYDTFIHGYCKHGKTSLAIKVLRDMEKKGC 580

Query: 540 NLVPDDTTFSIVVDLLAKDEKYHE 563
           N  P   T+++++    +  K  E
Sbjct: 581 N--PSTRTYNLLIRGFEEKHKSEE 602



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 123/447 (27%), Positives = 209/447 (46%), Gaps = 52/447 (11%)

Query: 105 GLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNM---IAFGV-RPDVITYGTLIN 160
           GL P+ +T N  I+        LC   R+ +A  +F++M      G+ RPD +T+  +++
Sbjct: 237 GLAPNVVTFNARIS-------ALCKAGRVLDAYRIFQDMQEDWQHGLPRPDQVTFDVMLS 289

Query: 161 GFCRTGNLSVALRL---------------HKKMVSGDYENGLISKT-------------- 191
           GFC  G +  A  L               + + +SG   NG + +               
Sbjct: 290 GFCDAGFVDEARVLVDIMRCGGFLRRVESYNRWLSGLVRNGRVGEAQELLREMAHEGIQP 349

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
           N ++Y+II+  LCKEG    A+ +   ++   ++P VV  T+L+H +C  GN    N + 
Sbjct: 350 NSYTYNIIVSGLCKEGKAFDARRVENFIRSGVMSPDVVTYTSLLHAYCSKGNIAAANRIL 409

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
            EM   G  PN  T+NV++  L + G+  EA  LLE M ++G + D    N ++DG C  
Sbjct: 410 DEMAQKGCAPNSFTYNVLLQSLWRAGRTTEAERLLERMNEKGYSLDTAGCNIIIDGLCRN 469

Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
            R+D A +I   M  +G      +   L N +  +++           IS       ITY
Sbjct: 470 SRLDVAMDIVDGMWEEGSG----ALGRLGNSFLSVVSDSS--------ISQRCLPDQITY 517

Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
           + L+S L + G+   A+K   EM + ++ PD   Y+  I G CK+     A+K+   +E 
Sbjct: 518 SILISALCKEGRFDEAKKKLLEMIVKDISPDSVIYDTFIHGYCKHGKTSLAIKVLRDMEK 577

Query: 432 NKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEK 491
                    +N LI G  +  + +   +L  ++ +KG+ P V+TY+ +I   C++G + K
Sbjct: 578 KGCNPSTRTYNLLIRGFEEKHKSEEIMKLMSEMKEKGISPNVMTYNSLIKSFCQQGMVNK 637

Query: 492 ANDFLLYMEKNGCAPNVVTFNTLMHGF 518
           A   L  M +N   PN+ +F+ L+  +
Sbjct: 638 AMPLLDEMLQNELVPNITSFDLLIKAY 664



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 131/504 (25%), Positives = 227/504 (45%), Gaps = 76/504 (15%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           C +G ++  EAR     M        + S+N     + +N          R++   G+ P
Sbjct: 292 CDAGFVD--EARVLVDIMRCGGFLRRVESYNRWLSGLVRNGRVGEAQELLREMAHEGIQP 349

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGV-RPDVITYGTLINGFCRTGN 167
           +  T NI+++       GLC E +  +A  + +N I  GV  PDV+TY +L++ +C  GN
Sbjct: 350 NSYTYNIIVS-------GLCKEGKAFDARRV-ENFIRSGVMSPDVVTYTSLLHAYCSKGN 401

Query: 168 LSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPA 227
           ++ A R+  +M     + G     N F+Y++++ SL + G   +A+ L   M  +G +  
Sbjct: 402 IAAANRILDEMA----QKG--CAPNSFTYNVLLQSLWRAGRTTEAERLLERMNEKGYSLD 455

Query: 228 VVVCTTLIHGFC-----------CAGNWEEVNGL-------FIEMLD---LGPR--PNLL 264
              C  +I G C             G WEE +G        F+ ++    +  R  P+ +
Sbjct: 456 TAGCNIIIDGLCRNSRLDVAMDIVDGMWEEGSGALGRLGNSFLSVVSDSSISQRCLPDQI 515

Query: 265 TFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSM 324
           T++++I  LCK G+ +EA   L  MI + ++PD   Y++ + GYC  G+   A ++   M
Sbjct: 516 TYSILISALCKEGRFDEAKKKLLEMIVKDISPDSVIYDTFIHGYCKHGKTSLAIKVLRDM 575

Query: 325 HSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQA 384
             KGC  +  +YN+LI G+ +    EE M L  ++   G+   V+TYN+L+    Q G  
Sbjct: 576 EKKGCNPSTRTYNLLIRGFEEKHKSEEIMKLMSEMKEKGISPNVMTYNSLIKSFCQQGMV 635

Query: 385 GYAQKLFDEMKLYNVEPDLSTYNILIDGLCK---------------NNCVQEAV------ 423
             A  L DEM    + P+++++++LI   CK                 C Q+ V      
Sbjct: 636 NKAMPLLDEMLQNELVPNITSFDLLIKAYCKITDFPSAQMVFDAALRTCGQKEVLYCLMC 695

Query: 424 ----------KLFHMLEMNKFEFGIEI----FNCLIDGLCKAGRLDNAWELFHKLPQKGL 469
                     +  ++LEM   E  + I    +  +I GLC+ G +D+A  L   L  K  
Sbjct: 696 TELTTYGKWIEAKNILEM-ALEMRVSIQSFPYKQIISGLCEVGEVDHAHSLLKLLIAKRH 754

Query: 470 VPTVVTYSIMIHGLCRKGKLEKAN 493
           +     +  +I  L  +GK +  +
Sbjct: 755 LFDPAAFMPVIDALGDRGKKQDVD 778


>gi|302776656|ref|XP_002971480.1| hypothetical protein SELMODRAFT_95907 [Selaginella moellendorffii]
 gi|300160612|gb|EFJ27229.1| hypothetical protein SELMODRAFT_95907 [Selaginella moellendorffii]
          Length = 631

 Score =  212 bits (539), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 144/486 (29%), Positives = 231/486 (47%), Gaps = 17/486 (3%)

Query: 72  SPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIG-LLPDFLTLNILINCFGNKERGLCVE 130
           +P + ++N L     K    D  +  +R+L   G   P+ ++ + L+  F      LC  
Sbjct: 122 APDVVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLV-IF------LCKM 174

Query: 131 NRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISK 190
           +R  +A  +F+ M+  G++ DV    TLI+  CR G L  A RL   M +          
Sbjct: 175 SRATDALAVFQEMLGAGLKADVNVCNTLIHCTCRLGMLRQARRLLHHMTAH------ACA 228

Query: 191 TNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGL 250
            + F+Y I++++ C+ G + +        +  G   + V    +I GF   G   E   L
Sbjct: 229 RDAFTYGILVNAHCRAGQMHEVASFMELARHDGCALSAVNYNFIIQGFIRCGRLAEATQL 288

Query: 251 FIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCL 310
           F   +     P++ T+N++I  LCK  ++ EA  L +   Q G+  D FTY+ LMD +  
Sbjct: 289 FESTMTKESVPDVFTYNLLI-ALCKSKQLEEALTLFQEAEQGGVVLDVFTYSYLMDAFGK 347

Query: 311 VGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVIT 370
            GR   A E+F +M   GC    V YN+LI+   K   V+EA+ L   +   G+     T
Sbjct: 348 AGRAAKALEVFYNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIMPDCRT 407

Query: 371 YNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLE 430
           YN ++  L   G+   A   F  MK     PD+ TYN L++GL K     EA  LF  ++
Sbjct: 408 YNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEMQ 467

Query: 431 MNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLE 490
            NK    +  F  LID L KAGR+++A E   +L + G  P    Y+ +I G CR G+++
Sbjct: 468 ANKCMPDLTTFGTLIDTLAKAGRMEDALEQSARLVKMGHAPNSYIYNALISGFCRSGQVD 527

Query: 491 KANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSI 550
           K  +    M +  C P+ +T+  L+ GF +   TS  +ELL +M        P   T+++
Sbjct: 528 KGYELFQDMIECSCFPDSITYTILVLGFSRRGHTSMAMELLQEMVREGHT--PALATYNV 585

Query: 551 VVDLLA 556
           ++  L+
Sbjct: 586 LIRSLS 591



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 130/432 (30%), Positives = 208/432 (48%), Gaps = 44/432 (10%)

Query: 127 LCVENRIKEATWLFKNMI-AFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYEN 185
           LC   R+++A  LF +M       PDV+ Y TLI G+C+ G+   AL + +++     + 
Sbjct: 99  LCEVRRVEQAMTLFDDMRETCDCAPDVVAYNTLIAGYCKAGDGDRALDMFRRL----KQE 154

Query: 186 GLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWE 245
           G   K N  S+  ++  LCK      A  +F EM G G+   V VC TLIH  C  G   
Sbjct: 155 G-SCKPNAVSFDTLVIFLCKMSRATDALAVFQEMLGAGLKADVNVCNTLIHCTCRLGMLR 213

Query: 246 EVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLM 305
           +   L   M       +  T+ ++++  C+ G+++E    +EL    G       YN ++
Sbjct: 214 QARRLLHHMTAHACARDAFTYGILVNAHCRAGQMHEVASFMELARHDGCALSAVNYNFII 273

Query: 306 DGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVR 365
            G+   GR+  A ++F S  +K     V +YN+LI   CK   +EEA++L+++    GV 
Sbjct: 274 QGFIRCGRLAEATQLFESTMTKESVPDVFTYNLLI-ALCKSKQLEEALTLFQEAEQGGVV 332

Query: 366 QTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKL 425
             V TY+ L+    +AG+A  A ++F  M+     PD   YN+LI               
Sbjct: 333 LDVFTYSYLMDAFGKAGRAAKALEVFYNMQKAGCMPDTVVYNVLI--------------- 377

Query: 426 FHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCR 485
                           +CL     K G++D A EL   + +KG++P   TY+I+I  L  
Sbjct: 378 ----------------SCL----GKQGKVDEALELLEDMNRKGIMPDCRTYNIVIDVLSS 417

Query: 486 KGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDD 545
            G+ EKA  F   M++   +P+VVT+NTL++G  +  +T +  +L  +M       +PD 
Sbjct: 418 CGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEM--QANKCMPDL 475

Query: 546 TTFSIVVDLLAK 557
           TTF  ++D LAK
Sbjct: 476 TTFGTLIDTLAK 487



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 123/438 (28%), Positives = 204/438 (46%), Gaps = 16/438 (3%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
           N  +H  C+ G+  L +AR    +MT    +    ++ +L  A  +      V SF    
Sbjct: 200 NTLIHCTCRLGM--LRQARRLLHHMTAHACARDAFTYGILVNAHCRAGQMHEVASFMELA 257

Query: 102 VSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLING 161
              G     +  N +I       +G     R+ EAT LF++ +     PDV TY  LI  
Sbjct: 258 RHDGCALSAVNYNFII-------QGFIRCGRLAEATQLFESTMTKESVPDVFTYNLLI-A 309

Query: 162 FCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKG 221
            C++  L  AL L ++   G    G++   ++F+YS ++D+  K G   KA E+F  M+ 
Sbjct: 310 LCKSKQLEEALTLFQEAEQG----GVV--LDVFTYSYLMDAFGKAGRAAKALEVFYNMQK 363

Query: 222 RGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINE 281
            G  P  VV   LI      G  +E   L  +M   G  P+  T+N++ID L   G+  +
Sbjct: 364 AGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIMPDCRTYNIVIDVLSSCGRYEK 423

Query: 282 ANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILIN 341
           A     +M +R  +PD  TYN+L++G   + R D A ++F  M +  C   + ++  LI+
Sbjct: 424 AYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEMQANKCMPDLTTFGTLID 483

Query: 342 GYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEP 401
              K   +E+A+    +++  G       YN L+SG  ++GQ     +LF +M   +  P
Sbjct: 484 TLAKAGRMEDALEQSARLVKMGHAPNSYIYNALISGFCRSGQVDKGYELFQDMIECSCFP 543

Query: 402 DLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELF 461
           D  TY IL+ G  +      A++L   +        +  +N LI  L  AG++++A+ LF
Sbjct: 544 DSITYTILVLGFSRRGHTSMAMELLQEMVREGHTPALATYNVLIRSLSMAGQVEDAYTLF 603

Query: 462 HKLPQKGLVPTVVTYSIM 479
            ++  KG  P + TYS +
Sbjct: 604 KEMIAKGFNPDMQTYSAL 621



 Score =  168 bits (426), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 118/472 (25%), Positives = 210/472 (44%), Gaps = 52/472 (11%)

Query: 94  VISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVI 153
            ++ Y+ L+  GL  D  T   ++       + +C   R +    L   +   GV    +
Sbjct: 2   ALATYKHLLKAGLPVDAHTATAMV-------KEVCKLGRTELLAELLAELRQKGVGLSEV 54

Query: 154 TYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAK 213
           T    I  F R G+L  A+ +   M  G++      + +  +++  +  LC+   V++A 
Sbjct: 55  TCTECIQAFGRAGDLDAAMGMLDDMRRGNF-----CQPDTVAFTAAMHWLCEVRRVEQAM 109

Query: 214 ELFLEMKGR-GINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGP-RPNLLTFNVMID 271
            LF +M+      P VV   TLI G+C AG+ +    +F  +   G  +PN ++F+ ++ 
Sbjct: 110 TLFDDMRETCDCAPDVVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVI 169

Query: 272 CLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKH 331
            LCK  +  +A  + + M+  GL  D    N+L+   C +G +  AR +   M +  C  
Sbjct: 170 FLCKMSRATDALAVFQEMLGAGLKADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHACAR 229

Query: 332 TVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLF 391
              +Y IL+N +C+   + E  S       +G   + + YN ++ G  + G+   A +LF
Sbjct: 230 DAFTYGILVNAHCRAGQMHEVASFMELARHDGCALSAVNYNFIIQGFIRCGRLAEATQLF 289

Query: 392 DEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKA 451
           +        PD+ TYN+LI                                     LCK+
Sbjct: 290 ESTMTKESVPDVFTYNLLI------------------------------------ALCKS 313

Query: 452 GRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTF 511
            +L+ A  LF +  Q G+V  V TYS ++    + G+  KA +    M+K GC P+ V +
Sbjct: 314 KQLEEALTLFQEAEQGGVVLDVFTYSYLMDAFGKAGRAAKALEVFYNMQKAGCMPDTVVY 373

Query: 512 NTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
           N L+    +  K  + +ELL  M    + ++PD  T++IV+D+L+   +Y +
Sbjct: 374 NVLISCLGKQGKVDEALELLEDM--NRKGIMPDCRTYNIVIDVLSSCGRYEK 423



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 69/269 (25%), Positives = 123/269 (45%), Gaps = 13/269 (4%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
           P    +N+L   + K    D  +     +   G++PD  T NI+I+   +     C   R
Sbjct: 368 PDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIMPDCRTYNIVIDVLSS-----C--GR 420

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
            ++A   F  M      PDV+TY TL+NG  +      A  L  +M +           +
Sbjct: 421 YEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEMQANK------CMPD 474

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
           + ++  +ID+L K G ++ A E    +   G  P   +   LI GFC +G  ++   LF 
Sbjct: 475 LTTFGTLIDTLAKAGRMEDALEQSARLVKMGHAPNSYIYNALISGFCRSGQVDKGYELFQ 534

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
           +M++    P+ +T+ +++    + G  + A  LL+ M++ G  P   TYN L+    + G
Sbjct: 535 DMIECSCFPDSITYTILVLGFSRRGHTSMAMELLQEMVREGHTPALATYNVLIRSLSMAG 594

Query: 313 RIDTAREIFLSMHSKGCKHTVVSYNILIN 341
           +++ A  +F  M +KG    + +Y+ L N
Sbjct: 595 QVEDAYTLFKEMIAKGFNPDMQTYSALPN 623


>gi|255565812|ref|XP_002523895.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223536825|gb|EEF38464.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 784

 Score =  211 bits (538), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 144/485 (29%), Positives = 238/485 (49%), Gaps = 21/485 (4%)

Query: 56  LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNI 115
           L+EA    G M      P   S+N +   + K    +        + + GLLP+  T NI
Sbjct: 228 LSEAIGLIGKMKDFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDMKNNGLLPNRNTFNI 287

Query: 116 LINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLH 175
           L++       G C    +KEA  +   M    V PDV TY  LI G C+ G +  A RL 
Sbjct: 288 LVS-------GYCKLGWLKEAAQVIDLMAQNNVLPDVWTYNMLIGGLCKDGKIDEAFRLK 340

Query: 176 KKMVSGDYENGLISKTNIFSYSIIIDSL--CKEGLVDKAKELFLEMKGRGINPAVVVCTT 233
            +M     EN L    ++ +Y+ +I+    C   L  K  EL  +M+G+G+ P  V    
Sbjct: 341 DEM-----EN-LKLLPDVVTYNTLINGCFDCSSSL--KGFELIDKMEGKGVKPNAVTYNV 392

Query: 234 LIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRG 293
           ++  +   G  +       +M + G  P+ +TFN +I+  CK G+++EA  +++ M ++G
Sbjct: 393 VVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLINGYCKAGRLSEAFRMMDEMSRKG 452

Query: 294 LNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAM 353
           L  +  T N+++   C   ++D A ++  S   +G     VSY  LI GY K     EAM
Sbjct: 453 LKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKDGKSVEAM 512

Query: 354 SLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGL 413
            L+ ++    +  ++ITYNT++ GL  +G+   +    +E+    + PD +TYN +I G 
Sbjct: 513 KLWDEMKEKEIIPSIITYNTMIGGLCHSGKTDQSIDKLNELLESGLVPDETTYNTIILGY 572

Query: 414 CKNNCVQEAVKLFHMLEMNKFEFGIEIFNC--LIDGLCKAGRLDNAWELFHKLPQKGLVP 471
           C+   V++A + FH  +M K  F  ++F C  L+ GLC  G LD A +LF+    KG   
Sbjct: 573 CREGQVEKAFQ-FHN-KMVKKSFKPDLFTCNILLRGLCTEGMLDKALKLFNTWISKGKAI 630

Query: 472 TVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELL 531
             VTY+ +I GLC++ + E+A D L  ME+    P+  T+N ++       +  +  E +
Sbjct: 631 DAVTYNTIISGLCKEDRFEEAFDLLAEMEEKKLGPDCYTYNAILSALADAGRMKEAEEFM 690

Query: 532 HKMAE 536
            ++ E
Sbjct: 691 SRIVE 695



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 121/422 (28%), Positives = 208/422 (49%), Gaps = 5/422 (1%)

Query: 131 NRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISK 190
           NR   A  +F  M    ++P+++T  TLIN   R  +   ++ L K + S   + G+   
Sbjct: 153 NRPHHAAQIFNRMKRLHLKPNLLTCNTLINALVRYPS-KPSVYLSKAIFSDVIKLGVKVN 211

Query: 191 TNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGL 250
           TN F+  I+I   C E  + +A  L  +MK     P  V   T++   C  G   E   L
Sbjct: 212 TNTFN--ILIYGCCIENKLSEAIGLIGKMKDFSCFPDNVSYNTILDVLCKKGKLNEARDL 269

Query: 251 FIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCL 310
            ++M + G  PN  TFN+++   CK G + EA  +++LM Q  + PD +TYN L+ G C 
Sbjct: 270 LLDMKNNGLLPNRNTFNILVSGYCKLGWLKEAAQVIDLMAQNNVLPDVWTYNMLIGGLCK 329

Query: 311 VGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVIT 370
            G+ID A  +   M +      VV+YN LING     +  +   L  ++   GV+   +T
Sbjct: 330 DGKIDEAFRLKDEMENLKLLPDVVTYNTLINGCFDCSSSLKGFELIDKMEGKGVKPNAVT 389

Query: 371 YNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLE 430
           YN ++    + G+   A     +M+     PD  T+N LI+G CK   + EA ++   + 
Sbjct: 390 YNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLINGYCKAGRLSEAFRMMDEMS 449

Query: 431 MNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLE 490
               +      N ++  LC   +LD+A++L     ++G     V+Y  +I G  + GK  
Sbjct: 450 RKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKDGKSV 509

Query: 491 KANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSI 550
           +A      M++    P+++T+NT++ G   + KT + ++ L+++ E    LVPD+TT++ 
Sbjct: 510 EAMKLWDEMKEKEIIPSIITYNTMIGGLCHSGKTDQSIDKLNELLES--GLVPDETTYNT 567

Query: 551 VV 552
           ++
Sbjct: 568 II 569



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 147/541 (27%), Positives = 222/541 (41%), Gaps = 73/541 (13%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
           N  L   CK G   LNEAR     M +    P  ++FN+L     K             +
Sbjct: 251 NTILDVLCKKG--KLNEARDLLLDMKNNGLLPNRNTFNILVSGYCKLGWLKEAAQVIDLM 308

Query: 102 VSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLING 161
               +LPD  T N+LI        GLC + +I EA  L   M    + PDV+TY TLING
Sbjct: 309 AQNNVLPDVWTYNMLIG-------GLCKDGKIDEAFRLKDEMENLKLLPDVVTYNTLING 361

Query: 162 FCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKG 221
                +      L  KM       G   K N  +Y++++    KEG +D A     +M+ 
Sbjct: 362 CFDCSSSLKGFELIDKM------EGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEE 415

Query: 222 RGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLC------- 274
            G +P  V   TLI+G+C AG   E   +  EM   G + N +T N ++  LC       
Sbjct: 416 SGFSPDCVTFNTLINGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDD 475

Query: 275 ----------------------------KGGKINEANGLLELMIQRGLNPDRFTYNSLMD 306
                                       K GK  EA  L + M ++ + P   TYN+++ 
Sbjct: 476 AYKLLSSASKRGYFVDEVSYGTLIMGYFKDGKSVEAMKLWDEMKEKEIIPSIITYNTMIG 535

Query: 307 GYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQ 366
           G C  G+ D + +    +   G      +YN +I GYC+   VE+A   + +++    + 
Sbjct: 536 GLCHSGKTDQSIDKLNELLESGLVPDETTYNTIILGYCREGQVEKAFQFHNKMVKKSFKP 595

Query: 367 TVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLF 426
            + T N LL GL   G    A KLF+         D  TYN +I GLCK +  +EA  L 
Sbjct: 596 DLFTCNILLRGLCTEGMLDKALKLFNTWISKGKAIDAVTYNTIISGLCKEDRFEEAFDLL 655

Query: 427 HMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLV---------------- 470
             +E  K       +N ++  L  AGR+  A E   ++ ++G +                
Sbjct: 656 AEMEEKKLGPDCYTYNAILSALADAGRMKEAEEFMSRIVEQGKLQDQTISLNKRKIESSS 715

Query: 471 -------PTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNK 523
                  P  VT+S  I+ LC +GK + A   +    + G   +  T+ +LM G ++  K
Sbjct: 716 ETSQESDPNSVTFSEQINELCTQGKYKDAMHMVQESTQKGITLHKSTYISLMEGLIKRRK 775

Query: 524 T 524
           +
Sbjct: 776 S 776



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 60/204 (29%), Positives = 107/204 (52%), Gaps = 7/204 (3%)

Query: 364 VRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAV 423
           V+   +  +T +       +  +A ++F+ MK  +++P+L T N LI+ L +    + +V
Sbjct: 135 VQSLRVILDTSIGAYVACNRPHHAAQIFNRMKRLHLKPNLLTCNTLINALVRYPS-KPSV 193

Query: 424 KLFHMLEMNKFEFGIEI----FNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIM 479
            L   +  +  + G+++    FN LI G C   +L  A  L  K+      P  V+Y+ +
Sbjct: 194 YLSKAIFSDVIKLGVKVNTNTFNILIYGCCIENKLSEAIGLIGKMKDFSCFPDNVSYNTI 253

Query: 480 IHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPER 539
           +  LC+KGKL +A D LL M+ NG  PN  TFN L+ G+ +     +  +++  MA+   
Sbjct: 254 LDVLCKKGKLNEARDLLLDMKNNGLLPNRNTFNILVSGYCKLGWLKEAAQVIDLMAQ--N 311

Query: 540 NLVPDDTTFSIVVDLLAKDEKYHE 563
           N++PD  T+++++  L KD K  E
Sbjct: 312 NVLPDVWTYNMLIGGLCKDGKIDE 335


>gi|297738285|emb|CBI27486.3| unnamed protein product [Vitis vinifera]
          Length = 509

 Score =  211 bits (538), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 149/511 (29%), Positives = 243/511 (47%), Gaps = 50/511 (9%)

Query: 56  LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNI 115
           L EA   F  M   +  P   S N L   ++K    D    F++ + + G+     T NI
Sbjct: 2   LEEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNI 61

Query: 116 LINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLH 175
           +I+        LC E  ++ A  LF  M   G  PD++TY +LI+G  + G L   + + 
Sbjct: 62  MIDY-------LCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIF 114

Query: 176 KKMVSGDYE------NGLIS-----------------------KTNIFSYSIIIDSLCKE 206
           ++M   D +      N LI+                       K N+ +YS  ID+ CKE
Sbjct: 115 EQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKE 174

Query: 207 GLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTF 266
           G++ +A + F++M+   + P     T+LI   C AGN  E   L  E+L  G + N++T+
Sbjct: 175 GMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTY 234

Query: 267 NVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHS 326
             ++D LC+ G++ EA  +   M+  G+ P++ TY +L+ G+     ++ A++I   M  
Sbjct: 235 TALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKE 294

Query: 327 KGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGY 386
           K  K  ++ Y  ++ G C    +EEA  L  +I  +G+    + Y TL+   F++GQA  
Sbjct: 295 KCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATE 354

Query: 387 AQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLF-HMLEMNKFEFGIEIFNCLI 445
           A  L +EM              L+DGLCKNNC + A KLF  ML+       I  +  LI
Sbjct: 355 ALTLLEEML------------DLVDGLCKNNCFEVAKKLFDEMLDKGMMPDKI-AYTALI 401

Query: 446 DGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCA 505
           DG  K G L  A  L  ++ + G+   +  Y+ +I GL   G+++KA + L  M   G  
Sbjct: 402 DGNMKHGNLQEALNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVL 461

Query: 506 PNVVTFNTLMHGFLQNNKTSKVVELLHKMAE 536
           P+ V +  L+  +    K  + +EL ++MA+
Sbjct: 462 PDEVVYMCLIKKYYALGKVDEALELQNEMAK 492



 Score =  209 bits (531), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 151/516 (29%), Positives = 245/516 (47%), Gaps = 50/516 (9%)

Query: 12  SSETVSKVKLSSLFKSPRQIAAVSSPETQLNEFLHENCKSGIINLNEARYFFGYMTHMQP 71
           +SE   K++   +F  PR            N  LH   K G  +L  +R FF  M     
Sbjct: 5   ASECFLKMRKFRVFPKPRSC----------NALLHRLSKVGRGDL--SRKFFKDMGAAGI 52

Query: 72  SPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVEN 131
              + ++N++   + K    +   S + ++   G  PD +T N LI+  G+ + GL    
Sbjct: 53  KRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLID--GHGKLGL---- 106

Query: 132 RIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKT 191
            + E   +F+ M      PDVITY  LIN FC+   +  A     +M +    NGL  K 
Sbjct: 107 -LDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKA----NGL--KP 159

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
           N+ +YS  ID+ CKEG++ +A + F++M+   + P     T+LI   C AGN  E   L 
Sbjct: 160 NVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLV 219

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
            E+L  G + N++T+  ++D LC+ G++ EA  +   M+  G+ P++ TY +L+ G+   
Sbjct: 220 EEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKA 279

Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
             ++ A++I   M  K  K  ++ Y  ++ G C    +EEA  L  +I  +G+    + Y
Sbjct: 280 KEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIY 339

Query: 372 NTLLSGLFQAGQAG-----------------------YAQKLFDEMKLYNVEPDLSTYNI 408
            TL+   F++GQA                         A+KLFDEM    + PD   Y  
Sbjct: 340 TTLMDAYFKSGQATEALTLLEEMLDLVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTA 399

Query: 409 LIDGLCKNNCVQEAVKLF-HMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQK 467
           LIDG  K+  +QEA+ L   M+E+   E  +  +  LI GL  +G++  A  L  ++  K
Sbjct: 400 LIDGNMKHGNLQEALNLRDRMIEIG-MELDLHAYTALIWGLSHSGQVQKARNLLDEMIGK 458

Query: 468 GLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNG 503
           G++P  V Y  +I      GK+++A +    M K G
Sbjct: 459 GVLPDEVVYMCLIKKYYALGKVDEALELQNEMAKRG 494



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 99/329 (30%), Positives = 170/329 (51%)

Query: 208 LVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFN 267
           ++++A E FL+M+   + P    C  L+H     G  +     F +M   G + ++ T+N
Sbjct: 1   MLEEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYN 60

Query: 268 VMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSK 327
           +MID LCK G +  A  L   M + G  PD  TYNSL+DG+  +G +D    IF  M   
Sbjct: 61  IMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDA 120

Query: 328 GCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYA 387
            C   V++YN LIN +CK   + +A     ++ +NG++  V+TY+T +    + G    A
Sbjct: 121 DCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEA 180

Query: 388 QKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDG 447
            K F +M+   + P+  TY  LID  CK   + EA+KL   +     +  +  +  L+DG
Sbjct: 181 IKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDG 240

Query: 448 LCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPN 507
           LC+ GR+  A E+F  +   G+ P   TY+ ++HG  +  ++E A D L  M++    P+
Sbjct: 241 LCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPD 300

Query: 508 VVTFNTLMHGFLQNNKTSKVVELLHKMAE 536
           ++ + T++ G    ++  +   L+ ++ E
Sbjct: 301 LLLYGTILWGLCNESRLEEAKLLIGEIKE 329



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 101/365 (27%), Positives = 166/365 (45%), Gaps = 27/365 (7%)

Query: 44  FLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVS 103
           F+   CK G+  L EA  FF  M  +  +P   ++  L  A  K  +    +    +++ 
Sbjct: 167 FIDAFCKEGM--LQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQ 224

Query: 104 IGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFC 163
            G+  + +T   L++       GLC E R+KEA  +F+ M+  GV P+  TY  L++GF 
Sbjct: 225 AGIKLNVVTYTALLD-------GLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFI 277

Query: 164 RTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRG 223
           +   +  A  + K+M           K ++  Y  I+  LC E  +++AK L  E+K  G
Sbjct: 278 KAKEMEYAKDILKEMKEK------CIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESG 331

Query: 224 INPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEAN 283
           IN   V+ TTL+  +  +G   E   L  EMLDL            +D LCK      A 
Sbjct: 332 INTNAVIYTTLMDAYFKSGQATEALTLLEEMLDL------------VDGLCKNNCFEVAK 379

Query: 284 GLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGY 343
            L + M+ +G+ PD+  Y +L+DG    G +  A  +   M   G +  + +Y  LI G 
Sbjct: 380 KLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGMELDLHAYTALIWGL 439

Query: 344 CKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDL 403
                V++A +L  ++I  GV    + Y  L+   +  G+   A +L +EM    +   L
Sbjct: 440 SHSGQVQKARNLLDEMIGKGVLPDEVVYMCLIKKYYALGKVDEALELQNEMAKRGMITGL 499

Query: 404 STYNI 408
           S + +
Sbjct: 500 SDHAV 504


>gi|357437447|ref|XP_003588999.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355478047|gb|AES59250.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 458

 Score =  211 bits (538), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 114/295 (38%), Positives = 174/295 (58%), Gaps = 12/295 (4%)

Query: 125 RGLCVENRIKEA-TWLFKNMIAFGVRPDVITYGTLINGFCRTG-NLSVALRLHKKMVSGD 182
           +G+C    I+ A  + +K ++A G   D  +YGTLING C+ G +   AL+L ++    D
Sbjct: 112 KGICQTGDIQRALNFHYKVVVARGFDVDHYSYGTLINGLCKVGGDTRAALQLLRQAFEPD 171

Query: 183 YENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAG 242
                     +  Y+ +ID++CK+  V+ A +L+ EM   GI+P VV  T LI GFC  G
Sbjct: 172 ----------VVMYTTVIDNMCKDTFVNDAFDLYYEMVASGISPNVVTYTALIDGFCVVG 221

Query: 243 NWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYN 302
             EE  GLF +M+     PN+ TFN ++D  CK GKI EA  +L  M+++ L  D   Y+
Sbjct: 222 KLEEALGLFKKMISENINPNVYTFNGLVDAFCKEGKIEEAKNVLNTMMEKDLKSDVVAYS 281

Query: 303 SLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISN 362
           SLM+GYCLV  +  A+ IF +M  +   + V SYNI+IN +CK+  V+EA+ L+ ++   
Sbjct: 282 SLMNGYCLVNEVFKAQSIFKTMAERELSYDVRSYNIMINEFCKMKMVDEAIKLFEEMPLK 341

Query: 363 GVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNN 417
            +   V+TY+TL+ GL ++G+  YA +L DEM      P++ TY  ++D LCKN+
Sbjct: 342 QIFPDVVTYHTLIDGLCKSGRLSYAMELVDEMDDRGEPPNIITYCPIVDVLCKNH 396



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 92/329 (27%), Positives = 165/329 (50%), Gaps = 43/329 (13%)

Query: 157 TLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELF 216
           T I G C+TG++  AL  H K+V      G     + +SY  +I+ LCK G   +A    
Sbjct: 109 TPIKGICQTGDIQRALNFHYKVVVA---RGF--DVDHYSYGTLINGLCKVGGDTRAA--- 160

Query: 217 LEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKG 276
                                              +++L     P+++ +  +ID +CK 
Sbjct: 161 -----------------------------------LQLLRQAFEPDVVMYTTVIDNMCKD 185

Query: 277 GKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSY 336
             +N+A  L   M+  G++P+  TY +L+DG+C+VG+++ A  +F  M S+     V ++
Sbjct: 186 TFVNDAFDLYYEMVASGISPNVVTYTALIDGFCVVGKLEEALGLFKKMISENINPNVYTF 245

Query: 337 NILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKL 396
           N L++ +CK   +EEA ++   ++   ++  V+ Y++L++G     +   AQ +F  M  
Sbjct: 246 NGLVDAFCKEGKIEEAKNVLNTMMEKDLKSDVVAYSSLMNGYCLVNEVFKAQSIFKTMAE 305

Query: 397 YNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDN 456
             +  D+ +YNI+I+  CK   V EA+KLF  + + +    +  ++ LIDGLCK+GRL  
Sbjct: 306 RELSYDVRSYNIMINEFCKMKMVDEAIKLFEEMPLKQIFPDVVTYHTLIDGLCKSGRLSY 365

Query: 457 AWELFHKLPQKGLVPTVVTYSIMIHGLCR 485
           A EL  ++  +G  P ++TY  ++  LC+
Sbjct: 366 AMELVDEMDDRGEPPNIITYCPIVDVLCK 394



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 80/292 (27%), Positives = 157/292 (53%), Gaps = 4/292 (1%)

Query: 232 TTLIHGFCCAGNWEE-VNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMI 290
           TT I G C  G+ +  +N  +  ++  G   +  ++  +I+ LCK G   +    L+L+ 
Sbjct: 108 TTPIKGICQTGDIQRALNFHYKVVVARGFDVDHYSYGTLINGLCKVG--GDTRAALQLL- 164

Query: 291 QRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVE 350
           ++   PD   Y +++D  C    ++ A +++  M + G    VV+Y  LI+G+C +  +E
Sbjct: 165 RQAFEPDVVMYTTVIDNMCKDTFVNDAFDLYYEMVASGISPNVVTYTALIDGFCVVGKLE 224

Query: 351 EAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILI 410
           EA+ L++++IS  +   V T+N L+    + G+   A+ + + M   +++ D+  Y+ L+
Sbjct: 225 EALGLFKKMISENINPNVYTFNGLVDAFCKEGKIEEAKNVLNTMMEKDLKSDVVAYSSLM 284

Query: 411 DGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLV 470
           +G C  N V +A  +F  +   +  + +  +N +I+  CK   +D A +LF ++P K + 
Sbjct: 285 NGYCLVNEVFKAQSIFKTMAERELSYDVRSYNIMINEFCKMKMVDEAIKLFEEMPLKQIF 344

Query: 471 PTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNN 522
           P VVTY  +I GLC+ G+L  A + +  M+  G  PN++T+  ++    +N+
Sbjct: 345 PDVVTYHTLIDGLCKSGRLSYAMELVDEMDDRGEPPNIITYCPIVDVLCKNH 396



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 84/307 (27%), Positives = 158/307 (51%), Gaps = 9/307 (2%)

Query: 270 IDCLCKGGKINEA-NGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKG 328
           I  +C+ G I  A N   ++++ RG + D ++Y +L++G C VG    A    L +  + 
Sbjct: 111 IKGICQTGDIQRALNFHYKVVVARGFDVDHYSYGTLINGLCKVGGDTRAA---LQLLRQA 167

Query: 329 CKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQ 388
            +  VV Y  +I+  CK   V +A  LY +++++G+   V+TY  L+ G    G+   A 
Sbjct: 168 FEPDVVMYTTVIDNMCKDTFVNDAFDLYYEMVASGISPNVVTYTALIDGFCVVGKLEEAL 227

Query: 389 KLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGL 448
            LF +M   N+ P++ T+N L+D  CK   ++EA  + + +     +  +  ++ L++G 
Sbjct: 228 GLFKKMISENINPNVYTFNGLVDAFCKEGKIEEAKNVLNTMMEKDLKSDVVAYSSLMNGY 287

Query: 449 CKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNV 508
           C    +  A  +F  + ++ L   V +Y+IMI+  C+   +++A      M      P+V
Sbjct: 288 CLVNEVFKAQSIFKTMAERELSYDVRSYNIMINEFCKMKMVDEAIKLFEEMPLKQIFPDV 347

Query: 509 VTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVS 568
           VT++TL+ G  ++ + S  +EL+ +M   +R   P+  T+  +VD+L K+   H+    S
Sbjct: 348 VTYHTLIDGLCKSGRLSYAMELVDEM--DDRGEPPNIITYCPIVDVLCKN---HDGVLSS 402

Query: 569 KSSYRAC 575
             S  +C
Sbjct: 403 GKSLPSC 409



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 66/227 (29%), Positives = 110/227 (48%), Gaps = 15/227 (6%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CK   +N  +A   +  M     SP + ++  L          +  +  ++K++S  + P
Sbjct: 183 CKDTFVN--DAFDLYYEMVASGISPNVVTYTALIDGFCVVGKLEEALGLFKKMISENINP 240

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           +  T N L++ F       C E +I+EA  +   M+   ++ DV+ Y +L+NG+C    +
Sbjct: 241 NVYTFNGLVDAF-------CKEGKIEEAKNVLNTMMEKDLKSDVVAYSSLMNGYCLVNEV 293

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
             A  + K M   +         ++ SY+I+I+  CK  +VD+A +LF EM  + I P V
Sbjct: 294 FKAQSIFKTMAEREL------SYDVRSYNIMINEFCKMKMVDEAIKLFEEMPLKQIFPDV 347

Query: 229 VVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCK 275
           V   TLI G C +G       L  EM D G  PN++T+  ++D LCK
Sbjct: 348 VTYHTLIDGLCKSGRLSYAMELVDEMDDRGEPPNIITYCPIVDVLCK 394


>gi|302767258|ref|XP_002967049.1| hypothetical protein SELMODRAFT_70269 [Selaginella moellendorffii]
 gi|300165040|gb|EFJ31648.1| hypothetical protein SELMODRAFT_70269 [Selaginella moellendorffii]
          Length = 454

 Score =  211 bits (537), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 133/460 (28%), Positives = 217/460 (47%), Gaps = 19/460 (4%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
           P   S+  L  A+ +    D   S   ++    L+PD  T N++I+        LC   R
Sbjct: 8   PNALSYCYLVKALCRTGKIDKACSTIAEMAREKLVPDVFTYNVVID-------TLCKARR 60

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
           I  A   F+ M      PDV+TY TL+ G C+ G ++ A  L      G  E   I+ ++
Sbjct: 61  ISRAIEFFETM----PEPDVVTYNTLLGGLCKNGRVAQACSLF-----GSMEGAGITPSD 111

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
           + +Y+ +ID  CK    + A  L   M  R  +P V    ++I+G C     ++   LF 
Sbjct: 112 V-TYTTLIDVFCKMCQFETAYGLLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFE 170

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
           EM   G +P+ +T+N +I  LC   +++EA  LL +M++    PD+ T+ +L++G C   
Sbjct: 171 EMKLAGCKPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVENSFQPDKITFTALIEGLCTTD 230

Query: 313 RIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYN 372
           RI  A  +F  M  +GC   +V++ +L++  C    +  A+S+ R        + VI Y 
Sbjct: 231 RIKEAFVLFQGMAKQGCAPDLVTHTVLVSKLCIRRKLRPALSVVRNY--PACPEAVILYT 288

Query: 373 TLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMN 432
            +   L +      A +L  +M    V P++ TY     GL        A + F  +   
Sbjct: 289 PIFRELGRRRGFDRAARLLQKMARRGVAPNVVTYTAFFKGLGDWKEGMRAYREFRRMLEQ 348

Query: 433 KFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKA 492
             E  +  +N L+DG CKA RLD A ++   + Q GL P +VTY+ ++   CRKGK+E  
Sbjct: 349 GIEPDMVAYNVLVDGFCKANRLDMAEKMVRYMDQSGLPPNIVTYNTLVGHHCRKGKVEAI 408

Query: 493 NDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLH 532
            + L  M   G  P+V T++TL+ G  +  +       L+
Sbjct: 409 GELLHTMVSRGRQPDVATWSTLVAGLFRVGQVDAAYSFLN 448



 Score =  208 bits (530), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 129/448 (28%), Positives = 209/448 (46%), Gaps = 21/448 (4%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           C++G   +++A      M   +  P + ++N++   + K R     I F+  +      P
Sbjct: 21  CRTG--KIDKACSTIAEMAREKLVPDVFTYNVVIDTLCKARRISRAIEFFETMPE----P 74

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           D +T N L+        GLC   R+ +A  LF +M   G+ P  +TY TLI+ FC+    
Sbjct: 75  DVVTYNTLLG-------GLCKNGRVAQACSLFGSMEGAGITPSDVTYTTLIDVFCKMCQF 127

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
             A  L + M S            ++SY  II+ LCK   VD+A +LF EMK  G  P  
Sbjct: 128 ETAYGLLQLMASRK------CSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAGCKPDR 181

Query: 229 VVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLEL 288
           V   TLIHG C      E   L   M++   +P+ +TF  +I+ LC   +I EA  L + 
Sbjct: 182 VTYNTLIHGLCVKQRLHEAKDLLTVMVENSFQPDKITFTALIEGLCTTDRIKEAFVLFQG 241

Query: 289 MIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILN 348
           M ++G  PD  T+  L+   C+  ++  A  +    +   C   V+ Y  +     +   
Sbjct: 242 MAKQGCAPDLVTHTVLVSKLCIRRKLRPALSVV--RNYPACPEAVILYTPIFRELGRRRG 299

Query: 349 VEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNI 408
            + A  L +++   GV   V+TY     GL    +   A + F  M    +EPD+  YN+
Sbjct: 300 FDRAARLLQKMARRGVAPNVVTYTAFFKGLGDWKEGMRAYREFRRMLEQGIEPDMVAYNV 359

Query: 409 LIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKG 468
           L+DG CK N +  A K+   ++ +     I  +N L+   C+ G+++   EL H +  +G
Sbjct: 360 LVDGFCKANRLDMAEKMVRYMDQSGLPPNIVTYNTLVGHHCRKGKVEAIGELLHTMVSRG 419

Query: 469 LVPTVVTYSIMIHGLCRKGKLEKANDFL 496
             P V T+S ++ GL R G+++ A  FL
Sbjct: 420 RQPDVATWSTLVAGLFRVGQVDAAYSFL 447



 Score =  194 bits (494), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 121/437 (27%), Positives = 198/437 (45%), Gaps = 45/437 (10%)

Query: 149 RPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGL 208
           +P+ ++Y  L+   CRTG +  A     +M        L+   ++F+Y+++ID+LCK   
Sbjct: 7   KPNALSYCYLVKALCRTGKIDKACSTIAEMA----REKLVP--DVFTYNVVIDTLCKARR 60

Query: 209 VDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNV 268
           + +A E F  M      P VV   TL+ G C  G   +   LF  M   G  P+ +T+  
Sbjct: 61  ISRAIEFFETMP----EPDVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDVTYTT 116

Query: 269 MIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKG 328
           +ID  CK  +   A GLL+LM  R  +P  ++Y S+++G C   ++D A ++F  M   G
Sbjct: 117 LIDVFCKMCQFETAYGLLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAG 176

Query: 329 CKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQ 388
           CK   V+YN LI+G C    + EA  L   ++ N  +   IT+  L+ GL    +   A 
Sbjct: 177 CKPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVENSFQPDKITFTALIEGLCTTDRIKEAF 236

Query: 389 KLFDEMKLYNVEPDLSTYNILIDGLC---------------------------------K 415
            LF  M      PDL T+ +L+  LC                                 +
Sbjct: 237 VLFQGMAKQGCAPDLVTHTVLVSKLCIRRKLRPALSVVRNYPACPEAVILYTPIFRELGR 296

Query: 416 NNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVT 475
                 A +L   +        +  +     GL        A+  F ++ ++G+ P +V 
Sbjct: 297 RRGFDRAARLLQKMARRGVAPNVVTYTAFFKGLGDWKEGMRAYREFRRMLEQGIEPDMVA 356

Query: 476 YSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMA 535
           Y++++ G C+  +L+ A   + YM+++G  PN+VT+NTL+    +  K   + ELLH M 
Sbjct: 357 YNVLVDGFCKANRLDMAEKMVRYMDQSGLPPNIVTYNTLVGHHCRKGKVEAIGELLHTMV 416

Query: 536 EPERNLVPDDTTFSIVV 552
              R   PD  T+S +V
Sbjct: 417 SRGRQ--PDVATWSTLV 431



 Score =  138 bits (348), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 90/328 (27%), Positives = 148/328 (45%), Gaps = 40/328 (12%)

Query: 66  MTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKER 125
           M   + SP + S+  +   + KNR  D     + ++   G  PD +T N LI+       
Sbjct: 137 MASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAGCKPDRVTYNTLIH------- 189

Query: 126 GLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYEN 185
           GLCV+ R+ EA  L   M+    +PD IT+  LI G C T  +  A  L + M       
Sbjct: 190 GLCVKQRLHEAKDLLTVMVENSFQPDKITFTALIEGLCTTDRIKEAFVLFQGMAKQGCAP 249

Query: 186 GLISKTNIFS---------------------------YSIIIDSLCKEGLVDKAKELFLE 218
            L++ T + S                           Y+ I   L +    D+A  L  +
Sbjct: 250 DLVTHTVLVSKLCIRRKLRPALSVVRNYPACPEAVILYTPIFRELGRRRGFDRAARLLQK 309

Query: 219 MKGRGINPAVVVCTTLIHGFCCAGNWEE---VNGLFIEMLDLGPRPNLLTFNVMIDCLCK 275
           M  RG+ P VV  T    G    G+W+E       F  ML+ G  P+++ +NV++D  CK
Sbjct: 310 MARRGVAPNVVTYTAFFKGL---GDWKEGMRAYREFRRMLEQGIEPDMVAYNVLVDGFCK 366

Query: 276 GGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVS 335
             +++ A  ++  M Q GL P+  TYN+L+  +C  G+++   E+  +M S+G +  V +
Sbjct: 367 ANRLDMAEKMVRYMDQSGLPPNIVTYNTLVGHHCRKGKVEAIGELLHTMVSRGRQPDVAT 426

Query: 336 YNILINGYCKILNVEEAMSLYRQIISNG 363
           ++ L+ G  ++  V+ A S     +S G
Sbjct: 427 WSTLVAGLFRVGQVDAAYSFLNLAMSQG 454



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 73/238 (30%), Positives = 120/238 (50%), Gaps = 6/238 (2%)

Query: 326 SKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAG 385
           S+ CK   +SY  L+   C+   +++A S   ++    +   V TYN ++  L +A +  
Sbjct: 3   SQDCKPNALSYCYLVKALCRTGKIDKACSTIAEMAREKLVPDVFTYNVVIDTLCKARRIS 62

Query: 386 YAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLI 445
            A + F+ M     EPD+ TYN L+ GLCKN  V +A  LF  +E          +  LI
Sbjct: 63  RAIEFFETMP----EPDVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDVTYTTLI 118

Query: 446 DGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCA 505
           D  CK  + + A+ L   +  +   PTV +Y  +I+GLC+  K+++A      M+  GC 
Sbjct: 119 DVFCKMCQFETAYGLLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAGCK 178

Query: 506 PNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
           P+ VT+NTL+HG     +  +  +LL  M   E +  PD  TF+ +++ L   ++  E
Sbjct: 179 PDRVTYNTLIHGLCVKQRLHEAKDLLTVMV--ENSFQPDKITFTALIEGLCTTDRIKE 234



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 58/205 (28%), Positives = 100/205 (48%), Gaps = 6/205 (2%)

Query: 359 IISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNC 418
           I S   +   ++Y  L+  L + G+   A     EM    + PD+ TYN++ID LCK   
Sbjct: 1   IFSQDCKPNALSYCYLVKALCRTGKIDKACSTIAEMAREKLVPDVFTYNVVIDTLCKARR 60

Query: 419 VQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSI 478
           +  A++ F  +     E  +  +N L+ GLCK GR+  A  LF  +   G+ P+ VTY+ 
Sbjct: 61  ISRAIEFFETMP----EPDVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDVTYTT 116

Query: 479 MIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPE 538
           +I   C+  + E A   L  M    C+P V ++ ++++G  +N K  +  +L  +M    
Sbjct: 117 LIDVFCKMCQFETAYGLLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLA- 175

Query: 539 RNLVPDDTTFSIVVDLLAKDEKYHE 563
               PD  T++ ++  L   ++ HE
Sbjct: 176 -GCKPDRVTYNTLIHGLCVKQRLHE 199


>gi|297737746|emb|CBI26947.3| unnamed protein product [Vitis vinifera]
          Length = 1078

 Score =  211 bits (537), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 136/440 (30%), Positives = 229/440 (52%), Gaps = 15/440 (3%)

Query: 113 LNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVAL 172
           L++LI  +  K       + +++   +F  MI   + PDV     ++        +S A+
Sbjct: 167 LDLLIWVYSKK-------SMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAV 219

Query: 173 RLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCT 232
            +++ M  G++  G+  K  I +Y+ ++DS CK G V +  +L  EM+ RG  P  V   
Sbjct: 220 EVYRTM--GEF--GI--KPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYN 273

Query: 233 TLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQR 292
            LI+G    G +E+  GL  EML  G + +  T+N +I      G + EA  L E M+ +
Sbjct: 274 VLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLK 333

Query: 293 GLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEA 352
           G +P   TYNS + G C +GR+  A +    M +      VVSYN LI GYC++ N+ +A
Sbjct: 334 GASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKA 393

Query: 353 MSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDG 412
             L+ ++ S  +  T++TYNTLL GL + G+   AQ+L  EM    + PD+ TY IL++G
Sbjct: 394 FLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNG 453

Query: 413 LCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPT 472
            CK   +  A + F  +     E     +   I G  K G    A+ L  ++  KG  P 
Sbjct: 454 SCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPD 513

Query: 473 VVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLH 532
           ++ Y++++ GLC+ G LE+A++ L  M  +G  P+ VT+ +++H  L+N +  K  E+ +
Sbjct: 514 LIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFY 573

Query: 533 KMAEPERNLVPDDTTFSIVV 552
           +M    + L P   T+++++
Sbjct: 574 EML--SKGLTPSVVTYTVLI 591



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 138/496 (27%), Positives = 239/496 (48%), Gaps = 15/496 (3%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
           P I ++N L  +  K       +    ++   G  P+ +T N+LIN       GL  +  
Sbjct: 232 PTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLIN-------GLSKKGE 284

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
            ++A  L   M+  G++    TY  LI G+   G L+ AL L ++MV         +   
Sbjct: 285 FEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKG------ASPT 338

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
           + +Y+  I  LCK G +  A +   +M    + P VV   TLI+G+C  GN  +   LF 
Sbjct: 339 VATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFD 398

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
           E+  +   P ++T+N ++D LC+ G++  A  L   MI  G+ PD  TY  L++G C +G
Sbjct: 399 ELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMG 458

Query: 313 RIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYN 372
            +  A+E F  M  +G +    +Y   I G  K+ +   A SL  ++++ G    +I YN
Sbjct: 459 SLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYN 518

Query: 373 TLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMN 432
            ++ GL + G    A +L  +M    V PD  TY  +I    +N  +++  ++F+ +   
Sbjct: 519 VVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSK 578

Query: 433 KFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKA 492
                +  +  LI G    GRL+ A+  F ++ +KG++P V+TY+ +I+GLC+  ++++A
Sbjct: 579 GLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQA 638

Query: 493 NDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVV 552
            +F   M + G  PN  ++  L++         + + L  +M   +R + PD  T S ++
Sbjct: 639 YNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQML--DRGVQPDSCTHSALL 696

Query: 553 DLLAKDEKYHECSAVS 568
             L KD K       S
Sbjct: 697 KQLGKDCKLQAVHGTS 712



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 102/337 (30%), Positives = 166/337 (49%), Gaps = 15/337 (4%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
           N  ++  C+ G  NL +A   F  +  +   P I ++N L   + +    +       ++
Sbjct: 378 NTLIYGYCRLG--NLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEM 435

Query: 102 VSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLING 161
           ++ G+ PD +T  IL+N       G C    +  A   F  M+  G+  D   Y T I G
Sbjct: 436 INEGIAPDIVTYTILVN-------GSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVG 488

Query: 162 FCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKG 221
             + G+ S A  L ++M++  +   LI       Y++++D LCK G +++A EL  +M  
Sbjct: 489 ELKLGDTSRAFSLQEEMLAKGFPPDLI------IYNVVVDGLCKLGNLEEASELLQKMVS 542

Query: 222 RGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINE 281
            G+ P  V  T++IH     G   +   +F EML  G  P+++T+ V+I      G++  
Sbjct: 543 DGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLER 602

Query: 282 ANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILIN 341
           A      M ++G+ P+  TYNSL++G C V R+D A   F  M  KG      SY ILIN
Sbjct: 603 AFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILIN 662

Query: 342 GYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGL 378
             C + N +EA+SLY+Q++  GV+    T++ LL  L
Sbjct: 663 ENCNMGNWQEALSLYKQMLDRGVQPDSCTHSALLKQL 699



 Score = 99.0 bits (245), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 72/269 (26%), Positives = 128/269 (47%), Gaps = 28/269 (10%)

Query: 30  QIAAVSSPETQLNEFLHENCK----------SGIINLNEARYFFGYMTHMQPS---PPIS 76
           ++ ++S  +   +E LHE  +           G + L +    F     M      P + 
Sbjct: 456 KMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLI 515

Query: 77  SFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVEN-RIKE 135
            +N++   + K  + +      +K+VS G++PD++T   +I+          +EN R+++
Sbjct: 516 IYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAH--------LENGRLRK 567

Query: 136 ATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFS 195
              +F  M++ G+ P V+TY  LI+G    G L  A     +M     E G++   N+ +
Sbjct: 568 GREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEM----QEKGILP--NVIT 621

Query: 196 YSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEML 255
           Y+ +I+ LCK   +D+A   F EM  +GI P     T LI+  C  GNW+E   L+ +ML
Sbjct: 622 YNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQML 681

Query: 256 DLGPRPNLLTFNVMIDCLCKGGKINEANG 284
           D G +P+  T + ++  L K  K+   +G
Sbjct: 682 DRGVQPDSCTHSALLKQLGKDCKLQAVHG 710



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 34/135 (25%), Positives = 73/135 (54%)

Query: 400 EPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWE 459
           E  +   ++LI    K + V++ + +F  +  ++    ++  N ++  L     +  A E
Sbjct: 161 EVSVKILDLLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVE 220

Query: 460 LFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFL 519
           ++  + + G+ PT+VTY+ ++   C+ GK+++  D L  M++ GCAPN VT+N L++G  
Sbjct: 221 VYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLS 280

Query: 520 QNNKTSKVVELLHKM 534
           +  +  +   L+ +M
Sbjct: 281 KKGEFEQAKGLIGEM 295


>gi|449476381|ref|XP_004154721.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17140-like [Cucumis sativus]
          Length = 875

 Score =  211 bits (537), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 154/554 (27%), Positives = 258/554 (46%), Gaps = 76/554 (13%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
           PPIS +NLLF    K    D VI  Y+ +    + P   T N+LI+        LC    
Sbjct: 116 PPISFYNLLFRCSLKESRVDCVIWLYKDMAVAKVKPQTYTFNLLIS-------ALCEMGY 168

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
           ++ A  +F  M   G +P+  + G L+ G+CR G  S  + L  +M S        +  N
Sbjct: 169 LENAREVFDKMSEKGCKPNEFSLGILVRGYCRAGLHSHGIDLLDEMRSSG------ALPN 222

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
             +Y+ +I SLC EG   +A++L  +M+  G++P +V     I   C +G   E + +F 
Sbjct: 223 RVAYNTVISSLCGEGQTVEAEKLVEKMREVGLSPDIVTFNCRIAALCKSGQILEASRIFR 282

Query: 253 EML---DLG-PRPNLLTFNVMIDCLC---------------------------------- 274
           +M    ++G P+PN +T+N+M++  C                                  
Sbjct: 283 DMQIDEEMGLPKPNTVTYNLMLEGFCSEGMFEEARAIFDSMKNSETLSLRSYNIWMLGLV 342

Query: 275 KGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVV 334
           + GK+ EA+ +L  M ++ + P+ ++YN L+ G C  G    AR I   M   G     V
Sbjct: 343 RSGKLLEAHLILNEMAEKNIKPNLYSYNILVHGLCKYGMFSDARSILGLMRESGVAPDTV 402

Query: 335 SYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEM 394
           +Y+ L++GYC+   + EA  + R++I  G    + T N LL  L++ G+A  A+ L   M
Sbjct: 403 TYSTLLHGYCRRGKILEANYVLREMIQVGCFPNMYTCNILLHSLWKEGRASEAEDLLQMM 462

Query: 395 KLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFH-MLEMNKFEFG------IEIFN----- 442
                  D  T N +I+GLCK   + +A+++   M        G      I++F+     
Sbjct: 463 NERGYGLDNVTCNTMINGLCKAGNLDKAIEIVSGMWTRGSASLGNLGNSFIDLFDIRNNG 522

Query: 443 --CLID---------GLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEK 491
             CL D         GLCK GR+D A +   ++  K L P  + +   I+  C++GKL  
Sbjct: 523 KKCLPDSITYATIIGGLCKVGRVDEAKKKLLEMIGKKLSPDSLIFDTFIYNYCKQGKLSS 582

Query: 492 ANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIV 551
           A   L  MEK GC  ++ T+N+L+ G    N+  ++  L+ +M   ER + P+  T++ +
Sbjct: 583 AFRVLKEMEKKGCNKSLRTYNSLIQGLGSENQIFEIYGLMDEMK--ERGIFPNVYTYNNI 640

Query: 552 VDLLAKDEKYHECS 565
           +  L++  K  + +
Sbjct: 641 ISCLSEGGKLKDAT 654



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 153/545 (28%), Positives = 235/545 (43%), Gaps = 96/545 (17%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLL------------------PDFLTLN 114
           P I   + L  +  ++  + +  S  R L  +GLL                  P     N
Sbjct: 63  PQIDHLHQLLLSQHRDFAHPSGFSLVRTLADLGLLENAISQFRSLRDRFPHDPPPISFYN 122

Query: 115 ILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRL 174
           +L  C   + R  CV        WL+K+M    V+P   T+  LI+  C  G L  A  +
Sbjct: 123 LLFRCSLKESRVDCV-------IWLYKDMAVAKVKPQTYTFNLLISALCEMGYLENAREV 175

Query: 175 HKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTL 234
             KM     E G   K N FS  I++   C+ GL     +L  EM+  G  P  V   T+
Sbjct: 176 FDKMS----EKG--CKPNEFSLGILVRGYCRAGLHSHGIDLLDEMRSSGALPNRVAYNTV 229

Query: 235 IHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMI---Q 291
           I   C  G   E   L  +M ++G  P+++TFN  I  LCK G+I EA+ +   M    +
Sbjct: 230 ISSLCGEGQTVEAEKLVEKMREVGLSPDIVTFNCRIAALCKSGQILEASRIFRDMQIDEE 289

Query: 292 RGL-NPDRFTYNSLMDGYCLVGRIDTAREIFLSMHS------------------------ 326
            GL  P+  TYN +++G+C  G  + AR IF SM +                        
Sbjct: 290 MGLPKPNTVTYNLMLEGFCSEGMFEEARAIFDSMKNSETLSLRSYNIWMLGLVRSGKLLE 349

Query: 327 ----------KGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLS 376
                     K  K  + SYNIL++G CK     +A S+   +  +GV    +TY+TLL 
Sbjct: 350 AHLILNEMAEKNIKPNLYSYNILVHGLCKYGMFSDARSILGLMRESGVAPDTVTYSTLLH 409

Query: 377 GLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEF 436
           G  + G+   A  +  EM      P++ T NIL+  L K     EA  L  M  MN+  +
Sbjct: 410 GYCRRGKILEANYVLREMIQVGCFPNMYTCNILLHSLWKEGRASEAEDLLQM--MNERGY 467

Query: 437 GIEIFNC--LIDGLCKAGRLDNAWELFHKLPQKG-----------------------LVP 471
           G++   C  +I+GLCKAG LD A E+   +  +G                        +P
Sbjct: 468 GLDNVTCNTMINGLCKAGNLDKAIEIVSGMWTRGSASLGNLGNSFIDLFDIRNNGKKCLP 527

Query: 472 TVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELL 531
             +TY+ +I GLC+ G++++A   LL M     +P+ + F+T ++ + +  K S    +L
Sbjct: 528 DSITYATIIGGLCKVGRVDEAKKKLLEMIGKKLSPDSLIFDTFIYNYCKQGKLSSAFRVL 587

Query: 532 HKMAE 536
            +M +
Sbjct: 588 KEMEK 592



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 133/485 (27%), Positives = 222/485 (45%), Gaps = 68/485 (14%)

Query: 83  GAVAKNRHYDAVIS-------------FYRKLVSIGLLPDFLTLNILINCFGNKERGLCV 129
           GA+     Y+ VIS                K+  +GL PD +T N  I         LC 
Sbjct: 218 GALPNRVAYNTVISSLCGEGQTVEAEKLVEKMREVGLSPDIVTFNCRI-------AALCK 270

Query: 130 ENRIKEATWLFKNMI---AFGV-RPDVITYGTLINGFCRTGNLSVALRLHKKMVSGD--- 182
             +I EA+ +F++M      G+ +P+ +TY  ++ GFC  G    A  +   M + +   
Sbjct: 271 SGQILEASRIFRDMQIDEEMGLPKPNTVTYNLMLEGFCSEGMFEEARAIFDSMKNSETLS 330

Query: 183 ------YENGLIS-------------------KTNIFSYSIIIDSLCKEGLVDKAKELFL 217
                 +  GL+                    K N++SY+I++  LCK G+   A+ +  
Sbjct: 331 LRSYNIWMLGLVRSGKLLEAHLILNEMAEKNIKPNLYSYNILVHGLCKYGMFSDARSILG 390

Query: 218 EMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGG 277
            M+  G+ P  V  +TL+HG+C  G   E N +  EM+ +G  PN+ T N+++  L K G
Sbjct: 391 LMRESGVAPDTVTYSTLLHGYCRRGKILEANYVLREMIQVGCFPNMYTCNILLHSLWKEG 450

Query: 278 KINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYN 337
           + +EA  LL++M +RG   D  T N++++G C  G +D A EI   M ++G      S  
Sbjct: 451 RASEAEDLLQMMNERGYGLDNVTCNTMINGLCKAGNLDKAIEIVSGMWTRGS----ASLG 506

Query: 338 ILINGYCKILNVEEAMSLYRQIISNGVR--QTVITYNTLLSGLFQAGQAGYAQKLFDEMK 395
            L N +  + ++           +NG +     ITY T++ GL + G+   A+K   EM 
Sbjct: 507 NLGNSFIDLFDIR----------NNGKKCLPDSITYATIIGGLCKVGRVDEAKKKLLEMI 556

Query: 396 LYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLD 455
              + PD   ++  I   CK   +  A ++   +E       +  +N LI GL    ++ 
Sbjct: 557 GKKLSPDSLIFDTFIYNYCKQGKLSSAFRVLKEMEKKGCNKSLRTYNSLIQGLGSENQIF 616

Query: 456 NAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLM 515
             + L  ++ ++G+ P V TY+ +I  L   GKL+ A   L  M + G +PN+ TF  L+
Sbjct: 617 EIYGLMDEMKERGIFPNVYTYNNIISCLSEGGKLKDATCLLDEMLQKGISPNIYTFRILI 676

Query: 516 HGFLQ 520
             F +
Sbjct: 677 GAFFK 681



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 144/544 (26%), Positives = 247/544 (45%), Gaps = 76/544 (13%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNL-LFGAVAKNRHYDAVISFYRKLVSIGLL 107
           C  G+    EAR  F  M + + +  + S+N+ + G V   +  +A +    ++    + 
Sbjct: 308 CSEGM--FEEARAIFDSMKNSE-TLSLRSYNIWMLGLVRSGKLLEAHL-ILNEMAEKNIK 363

Query: 108 PDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGN 167
           P+  + NIL++       GLC      +A  +   M   GV PD +TY TL++G+CR G 
Sbjct: 364 PNLYSYNILVH-------GLCKYGMFSDARSILGLMRESGVAPDTVTYSTLLHGYCRRGK 416

Query: 168 LSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPA 227
           +  A  + ++M+       +    N+++ +I++ SL KEG   +A++L   M  RG    
Sbjct: 417 ILEANYVLREMIQ------VGCFPNMYTCNILLHSLWKEGRASEAEDLLQMMNERGYGLD 470

Query: 228 VVVCTTLIHGFCCAGNWEE----VNGL--------------FIEMLDL---GPR--PNLL 264
            V C T+I+G C AGN ++    V+G+              FI++ D+   G +  P+ +
Sbjct: 471 NVTCNTMINGLCKAGNLDKAIEIVSGMWTRGSASLGNLGNSFIDLFDIRNNGKKCLPDSI 530

Query: 265 TFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSM 324
           T+  +I  LCK G+++EA   L  MI + L+PD   +++ +  YC  G++ +A  +   M
Sbjct: 531 TYATIIGGLCKVGRVDEAKKKLLEMIGKKLSPDSLIFDTFIYNYCKQGKLSSAFRVLKEM 590

Query: 325 HSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQA 384
             KGC  ++ +YN LI G      + E   L  ++   G+   V TYN ++S L + G+ 
Sbjct: 591 EKKGCNKSLRTYNSLIQGLGSENQIFEIYGLMDEMKERGIFPNVYTYNNIISCLSEGGKL 650

Query: 385 GYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLF--------HMLEMNKFEF 436
             A  L DEM    + P++ T+ ILI    K      A +LF        H   +  F F
Sbjct: 651 KDATCLLDEMLQKGISPNIYTFRILIGAFFKACDFGAAQELFEIALSLCGHKESLYSFMF 710

Query: 437 -----------GIEIFNC---------------LIDGLCKAGRLDNAWELFHKLPQKGLV 470
                        E+F                 LI+ LCK G+LD+A  + HK+  K   
Sbjct: 711 NELLAGGETLKAKELFEAALDRSLALKNFLYRDLIEKLCKDGKLDDASFILHKMMDKQYS 770

Query: 471 PTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTF-NTLMHGFLQNNKTSKVVE 529
               ++  +I  L ++G    A++F   M +     +     N  + G L NN  S   +
Sbjct: 771 FDPASFMPVIDELGKRGSKHAADEFAERMMEMASETDFNEHENKNIRGRLNNNDESDWQK 830

Query: 530 LLHK 533
           ++H+
Sbjct: 831 IVHR 834



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 96/373 (25%), Positives = 176/373 (47%), Gaps = 44/373 (11%)

Query: 233 TLIHGFCCAGNWEEVNGLFIEMLDLGPR--PNLLTFNVMIDCLCKGGKINEANGLLELMI 290
           +L+      G  E     F  + D  P   P +  +N++  C  K  +++    L + M 
Sbjct: 86  SLVRTLADLGLLENAISQFRSLRDRFPHDPPPISFYNLLFRCSLKESRVDCVIWLYKDMA 145

Query: 291 QRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVE 350
              + P  +T+N L+   C +G ++ ARE+F  M  KGCK    S  IL+ GYC+     
Sbjct: 146 VAKVKPQTYTFNLLISALCEMGYLENAREVFDKMSEKGCKPNEFSLGILVRGYCRAGLHS 205

Query: 351 EAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILI 410
             + L  ++ S+G     + YNT++S L   GQ   A+KL ++M+   + PD+ T+N  I
Sbjct: 206 HGIDLLDEMRSSGALPNRVAYNTVISSLCGEGQTVEAEKLVEKMREVGLSPDIVTFNCRI 265

Query: 411 DGLCKNNCVQEAVKLFHMLEMNKFEFGIE-----IFNCLIDGLCKAGRLDNAWELF---- 461
             LCK+  + EA ++F  +++++ E G+       +N +++G C  G  + A  +F    
Sbjct: 266 AALCKSGQILEASRIFRDMQIDE-EMGLPKPNTVTYNLMLEGFCSEGMFEEARAIFDSMK 324

Query: 462 ------------------------------HKLPQKGLVPTVVTYSIMIHGLCRKGKLEK 491
                                         +++ +K + P + +Y+I++HGLC+ G    
Sbjct: 325 NSETLSLRSYNIWMLGLVRSGKLLEAHLILNEMAEKNIKPNLYSYNILVHGLCKYGMFSD 384

Query: 492 ANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIV 551
           A   L  M ++G AP+ VT++TL+HG+ +  K  +   +L +M +      P+  T +I+
Sbjct: 385 ARSILGLMRESGVAPDTVTYSTLLHGYCRRGKILEANYVLREMIQV--GCFPNMYTCNIL 442

Query: 552 VDLLAKDEKYHEC 564
           +  L K+ +  E 
Sbjct: 443 LHSLWKEGRASEA 455


>gi|15218241|ref|NP_172439.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75097039|sp|O04491.1|PPR26_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g09680
 gi|2160161|gb|AAB60724.1| F21M12.7 gene product [Arabidopsis thaliana]
 gi|332190358|gb|AEE28479.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 607

 Score =  211 bits (537), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 115/372 (30%), Positives = 206/372 (55%), Gaps = 5/372 (1%)

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
           N++ ++I+++  CKEG +  A+++F E+  R + P VV   TLI+G+C  GN +E   L 
Sbjct: 239 NVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLK 298

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
            +M     RP++ T++ +I+ LCK  K++ A+GL + M +RGL P+   + +L+ G+   
Sbjct: 299 HQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRN 358

Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
           G ID  +E +  M SKG +  +V YN L+NG+CK  ++  A ++   +I  G+R   ITY
Sbjct: 359 GEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITY 418

Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
            TL+ G  + G    A ++  EM    +E D   ++ L+ G+CK   V +A +    +  
Sbjct: 419 TTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLR 478

Query: 432 NKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEK 491
              +     +  ++D  CK G     ++L  ++   G VP+VVTY+++++GLC+ G+++ 
Sbjct: 479 AGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKN 538

Query: 492 ANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIV 551
           A+  L  M   G  P+ +T+NTL+ G  ++  +SK       + +PE  +V D  ++  +
Sbjct: 539 ADMLLDAMLNIGVVPDDITYNTLLEGHHRHANSSK-----RYIQKPEIGIVADLASYKSI 593

Query: 552 VDLLAKDEKYHE 563
           V+ L +  K H 
Sbjct: 594 VNELDRASKDHR 605



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 128/416 (30%), Positives = 216/416 (51%), Gaps = 18/416 (4%)

Query: 74  PISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRI 133
           PI     L   + K      +  FY +++  G   +    NIL+N F       C E  I
Sbjct: 204 PIRGCGNLLDRMMKLNPTGTIWGFYMEILDAGFPLNVYVFNILMNKF-------CKEGNI 256

Query: 134 KEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNI 193
            +A  +F  +    ++P V+++ TLING+C+ GNL    RL  +M          ++ ++
Sbjct: 257 SDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSR------TRPDV 310

Query: 194 FSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIE 253
           F+YS +I++LCKE  +D A  LF EM  RG+ P  V+ TTLIHG    G  + +   + +
Sbjct: 311 FTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQK 370

Query: 254 MLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGR 313
           ML  G +P+++ +N +++  CK G +  A  +++ MI+RGL PD+ TY +L+DG+C  G 
Sbjct: 371 MLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGD 430

Query: 314 IDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNT 373
           ++TA EI   M   G +   V ++ L+ G CK   V +A    R+++  G++   +TY  
Sbjct: 431 VETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTM 490

Query: 374 LLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFH-MLEMN 432
           ++    + G A    KL  EM+     P + TYN+L++GLCK   ++ A  L   ML + 
Sbjct: 491 MMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIG 550

Query: 433 KFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGK 488
                I  +N L++G     R  N+ + + + P+ G+V  + +Y  +++ L R  K
Sbjct: 551 VVPDDI-TYNTLLEG---HHRHANSSKRYIQKPEIGIVADLASYKSIVNELDRASK 602



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 101/355 (28%), Positives = 182/355 (51%), Gaps = 8/355 (2%)

Query: 215 LFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLC 274
            ++E+   G    V V   L++ FC  GN  +   +F E+     +P +++FN +I+  C
Sbjct: 227 FYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYC 286

Query: 275 KGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVV 334
           K G ++E   L   M +    PD FTY++L++  C   ++D A  +F  M  +G     V
Sbjct: 287 KVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDV 346

Query: 335 SYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEM 394
            +  LI+G+ +   ++     Y++++S G++  ++ YNTL++G  + G    A+ + D M
Sbjct: 347 IFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGM 406

Query: 395 KLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRL 454
               + PD  TY  LIDG C+   V+ A+++   ++ N  E     F+ L+ G+CK GR+
Sbjct: 407 IRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRV 466

Query: 455 DNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTL 514
            +A     ++ + G+ P  VTY++M+   C+KG  +     L  M+ +G  P+VVT+N L
Sbjct: 467 IDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVL 526

Query: 515 MHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSK 569
           ++G  +  +      LL  M      +VPDD T++ ++      E +H  +  SK
Sbjct: 527 LNGLCKLGQMKNADMLLDAMLNI--GVVPDDITYNTLL------EGHHRHANSSK 573



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 110/373 (29%), Positives = 184/373 (49%), Gaps = 18/373 (4%)

Query: 41  LNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRK 100
            N  +++ CK G  N+++A+  F  +T     P + SFN L     K  + D       +
Sbjct: 243 FNILMNKFCKEG--NISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQ 300

Query: 101 LVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLIN 160
           +      PD  T + LIN        LC EN++  A  LF  M   G+ P+ + + TLI+
Sbjct: 301 MEKSRTRPDVFTYSALIN-------ALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIH 353

Query: 161 GFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMK 220
           G  R G + +    ++KM+S     GL  + +I  Y+ +++  CK G +  A+ +   M 
Sbjct: 354 GHSRNGEIDLMKESYQKMLS----KGL--QPDIVLYNTLVNGFCKNGDLVAARNIVDGMI 407

Query: 221 GRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKIN 280
            RG+ P  +  TTLI GFC  G+ E    +  EM   G   + + F+ ++  +CK G++ 
Sbjct: 408 RRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVI 467

Query: 281 EANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILI 340
           +A   L  M++ G+ PD  TY  +MD +C  G   T  ++   M S G   +VV+YN+L+
Sbjct: 468 DAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLL 527

Query: 341 NGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVE 400
           NG CK+  ++ A  L   +++ GV    ITYNTLL G  +   +    K + +     + 
Sbjct: 528 NGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEGHHRHANSS---KRYIQKPEIGIV 584

Query: 401 PDLSTYNILIDGL 413
            DL++Y  +++ L
Sbjct: 585 ADLASYKSIVNEL 597



 Score = 59.3 bits (142), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 33/142 (23%), Positives = 68/142 (47%), Gaps = 2/142 (1%)

Query: 419 VQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSI 478
           + +A++ F +   ++F+  I     L+D + K       W  + ++   G    V  ++I
Sbjct: 186 IPDAIQCFRLSRKHRFDVPIRGCGNLLDRMMKLNPTGTIWGFYMEILDAGFPLNVYVFNI 245

Query: 479 MIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPE 538
           +++  C++G +  A      + K    P VV+FNTL++G+ +     +   L H+M +  
Sbjct: 246 LMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSR 305

Query: 539 RNLVPDDTTFSIVVDLLAKDEK 560
               PD  T+S +++ L K+ K
Sbjct: 306 TR--PDVFTYSALINALCKENK 325


>gi|449454285|ref|XP_004144886.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17140-like [Cucumis sativus]
 gi|449472527|ref|XP_004153621.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17140-like [Cucumis sativus]
          Length = 875

 Score =  211 bits (537), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 154/554 (27%), Positives = 258/554 (46%), Gaps = 76/554 (13%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
           PPIS +NLLF    K    D VI  Y+ +    + P   T N+LI+        LC    
Sbjct: 116 PPISFYNLLFRCSLKESRVDCVIWLYKDMAVARVKPQTYTFNLLIS-------ALCEMGY 168

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
           ++ A  +F  M   G +P+  + G L+ G+CR G  S  + L  +M S        +  N
Sbjct: 169 LENAREVFDKMSEKGCKPNEFSLGILVRGYCRAGLHSHGIDLLDEMRSSG------ALPN 222

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
             +Y+ +I SLC EG   +A++L  +M+  G++P +V     I   C +G   E + +F 
Sbjct: 223 RVAYNTVISSLCGEGQTVEAEKLVEKMREVGLSPDIVTFNCRIAALCKSGQILEASRIFR 282

Query: 253 EML---DLG-PRPNLLTFNVMIDCLC---------------------------------- 274
           +M    ++G P+PN +T+N+M++  C                                  
Sbjct: 283 DMQIDEEMGLPKPNTVTYNLMLEGFCSEGMFEEARAIFDSMKNSETLSLRSYNIWMLGLV 342

Query: 275 KGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVV 334
           + GK+ EA+ +L  M ++ + P+ ++YN L+ G C  G    AR I   M   G     V
Sbjct: 343 RSGKLLEAHLILNEMAEKNIKPNLYSYNILVHGLCKYGMFSDARSILGLMRESGVAPDTV 402

Query: 335 SYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEM 394
           +Y+ L++GYC+   + EA  + R++I  G    + T N LL  L++ G+A  A+ L   M
Sbjct: 403 TYSTLLHGYCRRGKILEANYVLREMIQVGCFPNMYTCNILLHSLWKEGRASEAEDLLQMM 462

Query: 395 KLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFH-MLEMNKFEFG------IEIFN----- 442
                  D  T N +I+GLCK   + +A+++   M        G      I++F+     
Sbjct: 463 NERGYGLDNVTCNTMINGLCKAGNLDKAIEIVSGMWTRGSASLGNLGNSFIDLFDIRNNG 522

Query: 443 --CLID---------GLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEK 491
             CL D         GLCK GR+D A +   ++  K L P  + +   I+  C++GKL  
Sbjct: 523 KKCLPDSITYATIIGGLCKVGRVDEAKKKLLEMIGKKLSPDSLIFDTFIYNYCKQGKLSS 582

Query: 492 ANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIV 551
           A   L  MEK GC  ++ T+N+L+ G    N+  ++  L+ +M   ER + P+  T++ +
Sbjct: 583 AFRVLKEMEKKGCNKSLRTYNSLIQGLGSENQIFEIYGLMDEMK--ERGIFPNVYTYNNI 640

Query: 552 VDLLAKDEKYHECS 565
           +  L++  K  + +
Sbjct: 641 ISCLSEGGKLKDAT 654



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 153/545 (28%), Positives = 235/545 (43%), Gaps = 96/545 (17%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLL------------------PDFLTLN 114
           P I   + L  +  ++  + +  S  R L  +GLL                  P     N
Sbjct: 63  PQIDHLHQLLLSQHRDFAHPSGFSLVRTLADLGLLENAISQFRSLRDRFPHDPPPISFYN 122

Query: 115 ILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRL 174
           +L  C   + R  CV        WL+K+M    V+P   T+  LI+  C  G L  A  +
Sbjct: 123 LLFRCSLKESRVDCV-------IWLYKDMAVARVKPQTYTFNLLISALCEMGYLENAREV 175

Query: 175 HKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTL 234
             KM     E G   K N FS  I++   C+ GL     +L  EM+  G  P  V   T+
Sbjct: 176 FDKMS----EKG--CKPNEFSLGILVRGYCRAGLHSHGIDLLDEMRSSGALPNRVAYNTV 229

Query: 235 IHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMI---Q 291
           I   C  G   E   L  +M ++G  P+++TFN  I  LCK G+I EA+ +   M    +
Sbjct: 230 ISSLCGEGQTVEAEKLVEKMREVGLSPDIVTFNCRIAALCKSGQILEASRIFRDMQIDEE 289

Query: 292 RGL-NPDRFTYNSLMDGYCLVGRIDTAREIFLSMHS------------------------ 326
            GL  P+  TYN +++G+C  G  + AR IF SM +                        
Sbjct: 290 MGLPKPNTVTYNLMLEGFCSEGMFEEARAIFDSMKNSETLSLRSYNIWMLGLVRSGKLLE 349

Query: 327 ----------KGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLS 376
                     K  K  + SYNIL++G CK     +A S+   +  +GV    +TY+TLL 
Sbjct: 350 AHLILNEMAEKNIKPNLYSYNILVHGLCKYGMFSDARSILGLMRESGVAPDTVTYSTLLH 409

Query: 377 GLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEF 436
           G  + G+   A  +  EM      P++ T NIL+  L K     EA  L  M  MN+  +
Sbjct: 410 GYCRRGKILEANYVLREMIQVGCFPNMYTCNILLHSLWKEGRASEAEDLLQM--MNERGY 467

Query: 437 GIEIFNC--LIDGLCKAGRLDNAWELFHKLPQKG-----------------------LVP 471
           G++   C  +I+GLCKAG LD A E+   +  +G                        +P
Sbjct: 468 GLDNVTCNTMINGLCKAGNLDKAIEIVSGMWTRGSASLGNLGNSFIDLFDIRNNGKKCLP 527

Query: 472 TVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELL 531
             +TY+ +I GLC+ G++++A   LL M     +P+ + F+T ++ + +  K S    +L
Sbjct: 528 DSITYATIIGGLCKVGRVDEAKKKLLEMIGKKLSPDSLIFDTFIYNYCKQGKLSSAFRVL 587

Query: 532 HKMAE 536
            +M +
Sbjct: 588 KEMEK 592



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 133/485 (27%), Positives = 222/485 (45%), Gaps = 68/485 (14%)

Query: 83  GAVAKNRHYDAVIS-------------FYRKLVSIGLLPDFLTLNILINCFGNKERGLCV 129
           GA+     Y+ VIS                K+  +GL PD +T N  I         LC 
Sbjct: 218 GALPNRVAYNTVISSLCGEGQTVEAEKLVEKMREVGLSPDIVTFNCRI-------AALCK 270

Query: 130 ENRIKEATWLFKNMI---AFGV-RPDVITYGTLINGFCRTGNLSVALRLHKKMVSGD--- 182
             +I EA+ +F++M      G+ +P+ +TY  ++ GFC  G    A  +   M + +   
Sbjct: 271 SGQILEASRIFRDMQIDEEMGLPKPNTVTYNLMLEGFCSEGMFEEARAIFDSMKNSETLS 330

Query: 183 ------YENGLIS-------------------KTNIFSYSIIIDSLCKEGLVDKAKELFL 217
                 +  GL+                    K N++SY+I++  LCK G+   A+ +  
Sbjct: 331 LRSYNIWMLGLVRSGKLLEAHLILNEMAEKNIKPNLYSYNILVHGLCKYGMFSDARSILG 390

Query: 218 EMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGG 277
            M+  G+ P  V  +TL+HG+C  G   E N +  EM+ +G  PN+ T N+++  L K G
Sbjct: 391 LMRESGVAPDTVTYSTLLHGYCRRGKILEANYVLREMIQVGCFPNMYTCNILLHSLWKEG 450

Query: 278 KINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYN 337
           + +EA  LL++M +RG   D  T N++++G C  G +D A EI   M ++G      S  
Sbjct: 451 RASEAEDLLQMMNERGYGLDNVTCNTMINGLCKAGNLDKAIEIVSGMWTRGS----ASLG 506

Query: 338 ILINGYCKILNVEEAMSLYRQIISNGVR--QTVITYNTLLSGLFQAGQAGYAQKLFDEMK 395
            L N +  + ++           +NG +     ITY T++ GL + G+   A+K   EM 
Sbjct: 507 NLGNSFIDLFDIR----------NNGKKCLPDSITYATIIGGLCKVGRVDEAKKKLLEMI 556

Query: 396 LYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLD 455
              + PD   ++  I   CK   +  A ++   +E       +  +N LI GL    ++ 
Sbjct: 557 GKKLSPDSLIFDTFIYNYCKQGKLSSAFRVLKEMEKKGCNKSLRTYNSLIQGLGSENQIF 616

Query: 456 NAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLM 515
             + L  ++ ++G+ P V TY+ +I  L   GKL+ A   L  M + G +PN+ TF  L+
Sbjct: 617 EIYGLMDEMKERGIFPNVYTYNNIISCLSEGGKLKDATCLLDEMLQKGISPNIYTFRILI 676

Query: 516 HGFLQ 520
             F +
Sbjct: 677 GAFFK 681



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 144/544 (26%), Positives = 247/544 (45%), Gaps = 76/544 (13%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNL-LFGAVAKNRHYDAVISFYRKLVSIGLL 107
           C  G+    EAR  F  M + + +  + S+N+ + G V   +  +A +    ++    + 
Sbjct: 308 CSEGM--FEEARAIFDSMKNSE-TLSLRSYNIWMLGLVRSGKLLEAHL-ILNEMAEKNIK 363

Query: 108 PDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGN 167
           P+  + NIL++       GLC      +A  +   M   GV PD +TY TL++G+CR G 
Sbjct: 364 PNLYSYNILVH-------GLCKYGMFSDARSILGLMRESGVAPDTVTYSTLLHGYCRRGK 416

Query: 168 LSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPA 227
           +  A  + ++M+       +    N+++ +I++ SL KEG   +A++L   M  RG    
Sbjct: 417 ILEANYVLREMIQ------VGCFPNMYTCNILLHSLWKEGRASEAEDLLQMMNERGYGLD 470

Query: 228 VVVCTTLIHGFCCAGNWEE----VNGL--------------FIEMLDL---GPR--PNLL 264
            V C T+I+G C AGN ++    V+G+              FI++ D+   G +  P+ +
Sbjct: 471 NVTCNTMINGLCKAGNLDKAIEIVSGMWTRGSASLGNLGNSFIDLFDIRNNGKKCLPDSI 530

Query: 265 TFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSM 324
           T+  +I  LCK G+++EA   L  MI + L+PD   +++ +  YC  G++ +A  +   M
Sbjct: 531 TYATIIGGLCKVGRVDEAKKKLLEMIGKKLSPDSLIFDTFIYNYCKQGKLSSAFRVLKEM 590

Query: 325 HSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQA 384
             KGC  ++ +YN LI G      + E   L  ++   G+   V TYN ++S L + G+ 
Sbjct: 591 EKKGCNKSLRTYNSLIQGLGSENQIFEIYGLMDEMKERGIFPNVYTYNNIISCLSEGGKL 650

Query: 385 GYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLF--------HMLEMNKFEF 436
             A  L DEM    + P++ T+ ILI    K      A +LF        H   +  F F
Sbjct: 651 KDATCLLDEMLQKGISPNIYTFRILIGAFFKACDFGAAQELFEIALSLCGHKESLYSFMF 710

Query: 437 -----------GIEIFNC---------------LIDGLCKAGRLDNAWELFHKLPQKGLV 470
                        E+F                 LI+ LCK G+LD+A  + HK+  K   
Sbjct: 711 NELLAGGETLKAKELFEAALDRSLALKNFLYRDLIEKLCKDGKLDDASFILHKMMDKQYS 770

Query: 471 PTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTF-NTLMHGFLQNNKTSKVVE 529
               ++  +I  L ++G    A++F   M +     +     N  + G L NN  S   +
Sbjct: 771 FDPASFMPVIDELGKRGSKHAADEFAERMMEMASETDFNEHENKNIRGRLNNNDESDWQK 830

Query: 530 LLHK 533
           ++H+
Sbjct: 831 IVHR 834



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 96/373 (25%), Positives = 176/373 (47%), Gaps = 44/373 (11%)

Query: 233 TLIHGFCCAGNWEEVNGLFIEMLDLGPR--PNLLTFNVMIDCLCKGGKINEANGLLELMI 290
           +L+      G  E     F  + D  P   P +  +N++  C  K  +++    L + M 
Sbjct: 86  SLVRTLADLGLLENAISQFRSLRDRFPHDPPPISFYNLLFRCSLKESRVDCVIWLYKDMA 145

Query: 291 QRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVE 350
              + P  +T+N L+   C +G ++ ARE+F  M  KGCK    S  IL+ GYC+     
Sbjct: 146 VARVKPQTYTFNLLISALCEMGYLENAREVFDKMSEKGCKPNEFSLGILVRGYCRAGLHS 205

Query: 351 EAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILI 410
             + L  ++ S+G     + YNT++S L   GQ   A+KL ++M+   + PD+ T+N  I
Sbjct: 206 HGIDLLDEMRSSGALPNRVAYNTVISSLCGEGQTVEAEKLVEKMREVGLSPDIVTFNCRI 265

Query: 411 DGLCKNNCVQEAVKLFHMLEMNKFEFGIE-----IFNCLIDGLCKAGRLDNAWELF---- 461
             LCK+  + EA ++F  +++++ E G+       +N +++G C  G  + A  +F    
Sbjct: 266 AALCKSGQILEASRIFRDMQIDE-EMGLPKPNTVTYNLMLEGFCSEGMFEEARAIFDSMK 324

Query: 462 ------------------------------HKLPQKGLVPTVVTYSIMIHGLCRKGKLEK 491
                                         +++ +K + P + +Y+I++HGLC+ G    
Sbjct: 325 NSETLSLRSYNIWMLGLVRSGKLLEAHLILNEMAEKNIKPNLYSYNILVHGLCKYGMFSD 384

Query: 492 ANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIV 551
           A   L  M ++G AP+ VT++TL+HG+ +  K  +   +L +M +      P+  T +I+
Sbjct: 385 ARSILGLMRESGVAPDTVTYSTLLHGYCRRGKILEANYVLREMIQV--GCFPNMYTCNIL 442

Query: 552 VDLLAKDEKYHEC 564
           +  L K+ +  E 
Sbjct: 443 LHSLWKEGRASEA 455


>gi|359477281|ref|XP_003631958.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Vitis vinifera]
          Length = 898

 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 148/548 (27%), Positives = 246/548 (44%), Gaps = 41/548 (7%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CK+    L+EA   F  +   +  P   ++N +         +D       +  + G +P
Sbjct: 311 CKAN--RLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIP 368

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
             +  N ++ C G K        R++EA  +F+ M    V P+V TY  LI+  CR G L
Sbjct: 369 SVIAYNCILTCLGKK-------RRVEEALRIFEEMKRDAV-PNVPTYNILIDMLCREGKL 420

Query: 169 SVALRLHKKM-VSGDYENGL----------------------------ISKTNIFSYSII 199
           + AL +   M  +G + N L                            +   N  ++S +
Sbjct: 421 NAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSL 480

Query: 200 IDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGP 259
           ID L K G VD A  L+ +M   G  P  +V T+LI  F   G  E+ + ++ EM+  G 
Sbjct: 481 IDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGC 540

Query: 260 RPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTARE 319
            P+L   N  +DC+ K G+  +   L   +   G  PD  +Y+ L+ G    G  +   E
Sbjct: 541 SPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYE 600

Query: 320 IFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLF 379
           +F +M  +GC     +YN +I+G+CK   V +A  L  ++   G   TV+TY +++ GL 
Sbjct: 601 LFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLA 660

Query: 380 QAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIE 439
           +  +   A  LF+E K   ++ ++  Y+ LIDG  K   + EA  +   L        + 
Sbjct: 661 KIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVY 720

Query: 440 IFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYM 499
            +NCL+D L KA  ++ A   F  +      P  +TYSI+I+GLCR  K  KA  F   M
Sbjct: 721 TWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSILINGLCRVRKFNKAFVFWQEM 780

Query: 500 EKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDE 559
           +K G  PN +T+ T++ G  +     +   L  +        +PD  +++ +++ L+   
Sbjct: 781 QKLGLKPNTITYTTMISGLAKAGNILEASGLFSRFK--ANGGIPDSASYNAMIEGLSSAN 838

Query: 560 KYHECSAV 567
           K  +  A+
Sbjct: 839 KAMDAYAL 846



 Score =  209 bits (531), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 125/461 (27%), Positives = 234/461 (50%), Gaps = 13/461 (2%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
           P + ++N+L   + +    +A +     +   GL P+ LT+NI+I+        LC   +
Sbjct: 402 PNVPTYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMID-------RLCKAQK 454

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
           ++EA  +F+ M      P+ +T+ +LI+G  + G +  A  L++KM+   +  G I    
Sbjct: 455 LEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIV--- 511

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
              Y+ +I S  K G  +   +++ EM   G +P + +  T +     AG  E+   LF 
Sbjct: 512 ---YTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFR 568

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
           E+   G  P+  +++++I  L K G  NE   L   M ++G   D   YN+++DG+C  G
Sbjct: 569 EINAHGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSG 628

Query: 313 RIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYN 372
           +++ A ++   M  KG   TVV+Y  +I+G  KI  ++EA  L+ +  SNG++  V+ Y+
Sbjct: 629 KVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYS 688

Query: 373 TLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMN 432
           +L+ G  + G+   A  + +E+    + P++ T+N L+D L K   + EA+  F  ++  
Sbjct: 689 SLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDL 748

Query: 433 KFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKA 492
           K       ++ LI+GLC+  + + A+  + ++ + GL P  +TY+ MI GL + G + +A
Sbjct: 749 KCPPNQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEA 808

Query: 493 NDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHK 533
           +      + NG  P+  ++N ++ G    NK      L  +
Sbjct: 809 SGLFSRFKANGGIPDSASYNAMIEGLSSANKAMDAYALFEE 849



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 137/482 (28%), Positives = 228/482 (47%), Gaps = 18/482 (3%)

Query: 77  SFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR-IKE 135
           ++N L   +A+N  +D +     ++   G  P   + NI I    N     CV++R ++E
Sbjct: 127 AYNSLLMVMARNTEFDHLERILEEMSLSGFGP---SSNISIELVAN-----CVKSRKLRE 178

Query: 136 ATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFS 195
           A  + + M  F  RP    Y  LI            L L  +M    YE       N+  
Sbjct: 179 AFDIIQTMRKFKFRPAFSAYTILIGALSEVREPDPMLILFHQMQELGYE------VNVHL 232

Query: 196 YSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEML 255
           ++ +I    +EG VD A  L  EMK   ++  +V+    I  F  AG  +     F EM 
Sbjct: 233 FTTLIRVFAREGRVDAALSLLDEMKSNSLDADIVLYNVCIDCFGKAGKVDMSWKFFHEMK 292

Query: 256 DLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRID 315
             G  P+ +T+  MI  LCK  +++EA  L E + Q    P  + YN+++ GY   G+ D
Sbjct: 293 SHGLMPDDVTYTSMIGVLCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFD 352

Query: 316 TAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLL 375
            A  +     +KG   +V++YN ++    K   VEEA+ ++ ++  + V   V TYN L+
Sbjct: 353 EAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEMKRDAV-PNVPTYNILI 411

Query: 376 SGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFE 435
             L + G+   A ++ D+M+   + P++ T NI+ID LCK   ++EA  +F  ++     
Sbjct: 412 DMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCT 471

Query: 436 FGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDF 495
                F+ LIDGL K GR+D+A+ L+ K+   G VP  + Y+ +I    + G+ E  +  
Sbjct: 472 PNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKI 531

Query: 496 LLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLL 555
              M   GC+P++   NT M    +  +T K   L  ++       +PD  ++SI++  L
Sbjct: 532 YKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREIN--AHGFIPDARSYSILIHGL 589

Query: 556 AK 557
            K
Sbjct: 590 VK 591



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 81/317 (25%), Positives = 142/317 (44%), Gaps = 3/317 (0%)

Query: 265 TFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSM 324
            +N ++  + +  + +    +LE M   G  P       L+       ++  A +I  +M
Sbjct: 127 AYNSLLMVMARNTEFDHLERILEEMSLSGFGPSSNISIELVANCVKSRKLREAFDIIQTM 186

Query: 325 HSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQA 384
                +    +Y ILI    ++   +  + L+ Q+   G    V  + TL+    + G+ 
Sbjct: 187 RKFKFRPAFSAYTILIGALSEVREPDPMLILFHQMQELGYEVNVHLFTTLIRVFAREGRV 246

Query: 385 GYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCL 444
             A  L DEMK  +++ D+  YN+ ID   K   V  + K FH ++ +        +  +
Sbjct: 247 DAALSLLDEMKSNSLDADIVLYNVCIDCFGKAGKVDMSWKFFHEMKSHGLMPDDVTYTSM 306

Query: 445 IDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGC 504
           I  LCKA RLD A ELF +L Q   VP    Y+ MI G    GK ++A   L   +  G 
Sbjct: 307 IGVLCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGS 366

Query: 505 APNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHEC 564
            P+V+ +N ++       K  +V E L    E +R+ VP+  T++I++D+L ++ K +  
Sbjct: 367 IPSVIAYNCILTCL---GKKRRVEEALRIFEEMKRDAVPNVPTYNILIDMLCREGKLNAA 423

Query: 565 SAVSKSSYRACLYVTIF 581
             +     RA L+  + 
Sbjct: 424 LEIRDDMERAGLFPNVL 440


>gi|414883768|tpg|DAA59782.1| TPA: hypothetical protein ZEAMMB73_461975 [Zea mays]
          Length = 683

 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 145/517 (28%), Positives = 244/517 (47%), Gaps = 56/517 (10%)

Query: 72  SPPISSFNLLFGAVAK-NRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVE 130
           SP   S+N++   +A+ + H DA++  YR+++   + P   T       FG   R LC  
Sbjct: 139 SPSFRSYNVVLSTLARADCHADALL-LYRRMLRDRVPPTTFT-------FGVAARALCRL 190

Query: 131 NRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISK 190
            R  +A  L + M   G  PD + Y T+I+     G ++ A  L  +M+      G  + 
Sbjct: 191 GRAGDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAAMLLDEMLL----MGCAAD 246

Query: 191 TNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGL 250
            N F+  ++   LC  G V +A  L   M  +G  P+VV    L+ G C     +E    
Sbjct: 247 VNTFNDLVL--GLCGLGRVREAARLVDRMMTQGCMPSVVTYGFLLQGLCRTRQADEA--- 301

Query: 251 FIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCL 310
              ML   P  N++  N +I      GK+  A  L E+M  +G  PD  TY+ LM G C 
Sbjct: 302 -CAMLGRLPEVNVVMLNTVIRGCLTEGKLARATELYEMMGSKGCPPDVHTYSILMHGLCK 360

Query: 311 VGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVIT 370
           +GR  +A  +   M  KGC   +V+Y+ L++ +C+    ++A ++  Q+++ G       
Sbjct: 361 LGRFGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMLAKGFSMNSQG 420

Query: 371 YNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFH--- 427
           YN ++  L + G+   A +L  EMK    +PD+ TYN +I  LC N+ ++EA  +F    
Sbjct: 421 YNGIIYALCKDGKLDQATRLVQEMKSQGCKPDICTYNTMIYHLCNNDLMEEAEHIFRNLI 480

Query: 428 -----------------MLEMNKFEFGIEI---------------FNCLIDGLCKAGRLD 455
                            +L   +++ G+ +               +N LI  LCK G +D
Sbjct: 481 EEGVVANGITYNTLIHALLRNGRWQEGLRLASEMLLHGCQLDVISYNGLIKALCKEGNVD 540

Query: 456 NAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLM 515
            +  L  ++  KG+ P   +Y+++I+ LC+ GK+  A +    M   G  P++VT+NTL+
Sbjct: 541 RSMALLEEMVTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLI 600

Query: 516 HGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVV 552
           +G  +   T   + LL K+  P  N+ PD  T++I++
Sbjct: 601 NGLCKVGWTHAALNLLEKL--PNENVHPDIVTYNILI 635



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 126/430 (29%), Positives = 212/430 (49%), Gaps = 25/430 (5%)

Query: 117 INCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHK 176
           +N F +   GLC   R++EA  L   M+  G  P V+TYG L+ G CRT     A  +  
Sbjct: 247 VNTFNDLVLGLCGLGRVREAARLVDRMMTQGCMPSVVTYGFLLQGLCRTRQADEACAMLG 306

Query: 177 KM-----------VSGDYENGLISKT--------------NIFSYSIIIDSLCKEGLVDK 211
           ++           + G    G +++               ++ +YSI++  LCK G    
Sbjct: 307 RLPEVNVVMLNTVIRGCLTEGKLARATELYEMMGSKGCPPDVHTYSILMHGLCKLGRFGS 366

Query: 212 AKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMID 271
           A  +  EM+ +G  P +V  +TL+H FC  G W++   +  +ML  G   N   +N +I 
Sbjct: 367 AVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMLAKGFSMNSQGYNGIIY 426

Query: 272 CLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKH 331
            LCK GK+++A  L++ M  +G  PD  TYN+++   C    ++ A  IF ++  +G   
Sbjct: 427 ALCKDGKLDQATRLVQEMKSQGCKPDICTYNTMIYHLCNNDLMEEAEHIFRNLIEEGVVA 486

Query: 332 TVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLF 391
             ++YN LI+   +    +E + L  +++ +G +  VI+YN L+  L + G    +  L 
Sbjct: 487 NGITYNTLIHALLRNGRWQEGLRLASEMLLHGCQLDVISYNGLIKALCKEGNVDRSMALL 546

Query: 392 DEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKA 451
           +EM    ++P+  +YN+LI+ LCK   V++A++L   +        I  +N LI+GLCK 
Sbjct: 547 EEMVTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKV 606

Query: 452 GRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTF 511
           G    A  L  KLP + + P +VTY+I+I   C+   L+ A   L      G  PN  T+
Sbjct: 607 GWTHAALNLLEKLPNENVHPDIVTYNILISWHCKVRLLDDAAMLLDKAISGGIVPNERTW 666

Query: 512 NTLMHGFLQN 521
             ++  F++ 
Sbjct: 667 GMMVQNFVRQ 676



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 126/435 (28%), Positives = 205/435 (47%), Gaps = 17/435 (3%)

Query: 52  GIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFL 111
           G+  + EA      M      P + ++  L   + + R  D   +   +L  +    + +
Sbjct: 259 GLGRVREAARLVDRMMTQGCMPSVVTYGFLLQGLCRTRQADEACAMLGRLPEV----NVV 314

Query: 112 TLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVA 171
            LN +I       RG   E ++  AT L++ M + G  PDV TY  L++G C+ G    A
Sbjct: 315 MLNTVI-------RGCLTEGKLARATELYEMMGSKGCPPDVHTYSILMHGLCKLGRFGSA 367

Query: 172 LRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVC 231
           +R+  +M     E G     NI +YS ++ S C+ G+ D A+ +  +M  +G +      
Sbjct: 368 VRMLDEM----EEKG--CAPNIVTYSTLLHSFCRNGMWDDARAMLDQMLAKGFSMNSQGY 421

Query: 232 TTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQ 291
             +I+  C  G  ++   L  EM   G +P++ T+N MI  LC    + EA  +   +I+
Sbjct: 422 NGIIYALCKDGKLDQATRLVQEMKSQGCKPDICTYNTMIYHLCNNDLMEEAEHIFRNLIE 481

Query: 292 RGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEE 351
            G+  +  TYN+L+      GR      +   M   GC+  V+SYN LI   CK  NV+ 
Sbjct: 482 EGVVANGITYNTLIHALLRNGRWQEGLRLASEMLLHGCQLDVISYNGLIKALCKEGNVDR 541

Query: 352 AMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILID 411
           +M+L  ++++ G++    +YN L++ L +AG+   A +L  EM    + PD+ TYN LI+
Sbjct: 542 SMALLEEMVTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLIN 601

Query: 412 GLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVP 471
           GLCK      A+ L   L        I  +N LI   CK   LD+A  L  K    G+VP
Sbjct: 602 GLCKVGWTHAALNLLEKLPNENVHPDIVTYNILISWHCKVRLLDDAAMLLDKAISGGIVP 661

Query: 472 TVVTYSIMIHGLCRK 486
              T+ +M+    R+
Sbjct: 662 NERTWGMMVQNFVRQ 676



 Score =  145 bits (366), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 91/291 (31%), Positives = 137/291 (47%), Gaps = 9/291 (3%)

Query: 249 GLFIEMLDLGPR-----PNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNS 303
           G  + +LD  PR     P+  ++NV++  L +     +A  L   M++  + P  FT+  
Sbjct: 123 GRALHLLDQMPRRFAVSPSFRSYNVVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGV 182

Query: 304 LMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNG 363
                C +GR   A  +   M   GC    V Y  +I+       V EA  L  +++  G
Sbjct: 183 AARALCRLGRAGDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAAMLLDEMLLMG 242

Query: 364 VRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAV 423
               V T+N L+ GL   G+   A +L D M      P + TY  L+ GLC+     EA 
Sbjct: 243 CAADVNTFNDLVLGLCGLGRVREAARLVDRMMTQGCMPSVVTYGFLLQGLCRTRQADEAC 302

Query: 424 KLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGL 483
            +   L     E  + + N +I G    G+L  A EL+  +  KG  P V TYSI++HGL
Sbjct: 303 AMLGRLP----EVNVVMLNTVIRGCLTEGKLARATELYEMMGSKGCPPDVHTYSILMHGL 358

Query: 484 CRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKM 534
           C+ G+   A   L  ME+ GCAPN+VT++TL+H F +N        +L +M
Sbjct: 359 CKLGRFGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQM 409



 Score =  105 bits (261), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 68/264 (25%), Positives = 116/264 (43%), Gaps = 33/264 (12%)

Query: 335 SYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEM 394
           SYN++++   +     +A+ LYR+++ + V  T  T+      L + G+AG A  L   M
Sbjct: 144 SYNVVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVAARALCRLGRAGDALALLRGM 203

Query: 395 KLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRL 454
             +   PD   Y  +I  L     V EA  L   + +      +  FN L+ GLC  GR+
Sbjct: 204 ARHGCVPDAVLYQTVIHALVAQGGVAEAAMLLDEMLLMGCAADVNTFNDLVLGLCGLGRV 263

Query: 455 DNAWELFHKLPQKGLVPTVVTYSIMIHGLCR----------------------------- 485
             A  L  ++  +G +P+VVTY  ++ GLCR                             
Sbjct: 264 REAARLVDRMMTQGCMPSVVTYGFLLQGLCRTRQADEACAMLGRLPEVNVVMLNTVIRGC 323

Query: 486 --KGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVP 543
             +GKL +A +    M   GC P+V T++ LMHG  +  +    V +L +M   E+   P
Sbjct: 324 LTEGKLARATELYEMMGSKGCPPDVHTYSILMHGLCKLGRFGSAVRMLDEME--EKGCAP 381

Query: 544 DDTTFSIVVDLLAKDEKYHECSAV 567
           +  T+S ++    ++  + +  A+
Sbjct: 382 NIVTYSTLLHSFCRNGMWDDARAM 405


>gi|115476328|ref|NP_001061760.1| Os08g0402600 [Oryza sativa Japonica Group]
 gi|113623729|dbj|BAF23674.1| Os08g0402600, partial [Oryza sativa Japonica Group]
          Length = 554

 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 130/478 (27%), Positives = 232/478 (48%), Gaps = 14/478 (2%)

Query: 58  EARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP-DFLTLNIL 116
           + R  FG +      P   ++N    A          +   R++   G  P +  + N++
Sbjct: 10  DVRRAFGILASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVV 69

Query: 117 INCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHK 176
           I        G+    R  +A  +F  M    V P+ ITY T+I+G  + G+L    RL  
Sbjct: 70  I-------AGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRD 122

Query: 177 KMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIH 236
           +MV     +GL  K N  +Y++++  LC+ G + +   L  EM  + + P     + L  
Sbjct: 123 QMVC----HGL--KPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFD 176

Query: 237 GFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNP 296
           G    G+ + +  LF + L  G      T +++++ LCK GK++ A  +L+ ++  GL P
Sbjct: 177 GLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVP 236

Query: 297 DRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLY 356
            R  YN+L++GYC  G ++ A   F  M S+  K   ++YN LING CK   +  A  L 
Sbjct: 237 TRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLL 296

Query: 357 RQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKN 416
            ++  NGV  TV T+NTL+    + GQ      +  EM+   ++P++ +Y  +++  CKN
Sbjct: 297 MEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKN 356

Query: 417 NCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTY 476
             + EAV +   +         +++N +ID   + G  D A+ L  K+   G+ P++VTY
Sbjct: 357 GKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTY 416

Query: 477 SIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKM 534
           +++I GLC + ++ +A + +  +  +   P+ V++NTL+          K ++L  +M
Sbjct: 417 NLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRM 474



 Score =  208 bits (530), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 138/489 (28%), Positives = 230/489 (47%), Gaps = 15/489 (3%)

Query: 58  EARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILI 117
           +A   F  MT     P   ++N +     K    +A      ++V  GL P+ +T N+L+
Sbjct: 81  DAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLL 140

Query: 118 NCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKK 177
           +       GLC   R+ E + L   M +  + PD  TY  L +G  R G+    L L  K
Sbjct: 141 S-------GLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGK 193

Query: 178 MVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHG 237
            +    +NG+      ++ SI+++ LCK+G V  A+E+   +   G+ P  V+  TLI+G
Sbjct: 194 YL----KNGVT--IGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLING 247

Query: 238 FCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPD 297
           +C  G  E     F +M     +P+ +T+N +I+ LCK  +I  A  LL  M   G+NP 
Sbjct: 248 YCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPT 307

Query: 298 RFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYR 357
             T+N+L+D Y   G+++    +   M   G K  VVSY  ++N +CK   + EA+++  
Sbjct: 308 VETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILD 367

Query: 358 QIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNN 417
            +    V      YN ++    + G    A  L ++MK   + P + TYN+LI GLC  +
Sbjct: 368 DMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQS 427

Query: 418 CVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYS 477
            + EA ++ + L  ++       +N LI   C  G +D A +L  ++ + G+  TV TY 
Sbjct: 428 QISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYH 487

Query: 478 IMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEP 537
            +I GL   G+L +       M +N   P+    N ++  + +     K  +L  +M + 
Sbjct: 488 QLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQK 547

Query: 538 ERNLVPDDT 546
             N   DDT
Sbjct: 548 RNN--HDDT 554



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 120/439 (27%), Positives = 210/439 (47%), Gaps = 7/439 (1%)

Query: 132 RIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKT 191
           R  +    F  + + G RPD   +   +      G+L  A+ + ++M             
Sbjct: 7   RHADVRRAFGILASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDG-----APPP 61

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
           N FSY+++I  + + G    A E+F EM  R + P  +   T+I G    G+ E    L 
Sbjct: 62  NAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLR 121

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
            +M+  G +PN +T+NV++  LC+ G++ E + LL+ M  + + PD FTY+ L DG    
Sbjct: 122 DQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRN 181

Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
           G       +F      G      + +IL+NG CK   V  A  + + +++ G+  T + Y
Sbjct: 182 GDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIY 241

Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
           NTL++G  Q G+   A   F +MK  +++PD  TYN LI+GLCK   +  A  L   ++ 
Sbjct: 242 NTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQD 301

Query: 432 NKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEK 491
           N     +E FN LID   + G+L+  + +  ++ + GL P VV+Y  +++  C+ GK+ +
Sbjct: 302 NGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPE 361

Query: 492 ANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIV 551
           A   L  M      PN   +N ++  ++++    +   L+ KM      + P   T++++
Sbjct: 362 AVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKM--KSNGISPSIVTYNLL 419

Query: 552 VDLLAKDEKYHECSAVSKS 570
           +  L    +  E   +  S
Sbjct: 420 IKGLCNQSQISEAEEIINS 438



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 119/447 (26%), Positives = 208/447 (46%), Gaps = 50/447 (11%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           C++G   + E       M   +  P   ++++LF  +++N    A++S + K +  G+  
Sbjct: 144 CRAG--RMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTI 201

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
              T +IL+N       GLC + ++  A  + ++++  G+ P  + Y TLING+C+TG L
Sbjct: 202 GDYTCSILLN-------GLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGEL 254

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
             A     +M S         K +  +Y+ +I+ LCK   +  A++L +EM+  G+NP V
Sbjct: 255 EGAFSTFGQMKSRHI------KPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTV 308

Query: 229 VVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLEL 288
               TLI  +   G  E+   +  EM + G +PN++++  +++  CK GKI EA  +L+ 
Sbjct: 309 ETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDD 368

Query: 289 MIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILN 348
           M  + + P+   YN+++D Y   G  D A  +   M S G   ++V+YN+LI G C    
Sbjct: 369 MFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQ 428

Query: 349 VEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNI 408
           + EA  +   + ++ +    ++YNTL+S     G    A  L   M  Y ++  + TY+ 
Sbjct: 429 ISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQ 488

Query: 409 LIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKG 468
           L                                   I GL  AGRL+    L+ K+ Q  
Sbjct: 489 L-----------------------------------ISGLGGAGRLNEMEYLYQKMMQNN 513

Query: 469 LVPTVVTYSIMIHGLCRKGKLEKANDF 495
           +VP+   ++IM+    + G   KA D 
Sbjct: 514 VVPSNAIHNIMVEAYSKYGNEIKAEDL 540



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 102/324 (31%), Positives = 164/324 (50%), Gaps = 3/324 (0%)

Query: 242 GNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGL-NPDRFT 300
           G   +V   F  +   G RP+   +N  +      G + EA G+L  M + G   P+ F+
Sbjct: 6   GRHADVRRAFGILASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFS 65

Query: 301 YNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQII 360
           YN ++ G    GR   A E+F  M  +      ++YN +I+G+ K  ++E    L  Q++
Sbjct: 66  YNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMV 125

Query: 361 SNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQ 420
            +G++   ITYN LLSGL +AG+ G    L DEM    + PD  TY+IL DGL +N   +
Sbjct: 126 CHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSK 185

Query: 421 EAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMI 480
             + LF     N    G    + L++GLCK G++  A E+   L   GLVPT V Y+ +I
Sbjct: 186 AMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLI 245

Query: 481 HGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERN 540
           +G C+ G+LE A      M+     P+ +T+N L++G  +  + +   +LL +M +   N
Sbjct: 246 NGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVN 305

Query: 541 LVPDDTTFSIVVDLLAKDEKYHEC 564
             P   TF+ ++D   +  +  +C
Sbjct: 306 --PTVETFNTLIDAYGRTGQLEKC 327


>gi|125548475|gb|EAY94297.1| hypothetical protein OsI_16066 [Oryza sativa Indica Group]
          Length = 602

 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 139/455 (30%), Positives = 222/455 (48%), Gaps = 17/455 (3%)

Query: 82  FGAVAKNRHYDAVISFYRKLVS-IGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLF 140
           +GA+         +   R++V  + + P+  T N LI+        LC   ++++A  + 
Sbjct: 138 YGALTDGYCRAGRLGDARRVVGGMPVQPNAYTYNPLIHT-------LCERGQVRDALSVL 190

Query: 141 KNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIII 200
            +M+  G  PDV+TY  L+   C+      A+ L   M +           N  +Y++++
Sbjct: 191 DDMLCRGCAPDVVTYNILLEATCKGRGYRQAMELIDLMRAEG------CTPNNVTYNVLM 244

Query: 201 DSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPR 260
           D +C EG VD A EL   +   G  P+ V   T++ G C A  W + + L  EML     
Sbjct: 245 DGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLRENCP 304

Query: 261 PNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREI 320
           PN  TFNV+I  LC+ G + +A  LLE M + G   +  TYN++++G C    +D A  +
Sbjct: 305 PNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGL 364

Query: 321 FLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQ 380
              M S GCK  +V+YN L+ G C      +A  L   +  NG     +T+NTL+  L Q
Sbjct: 365 LSKMKSYGCKPDIVTYNTLLKGLCSAAQWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQ 424

Query: 381 AGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIE- 439
            G    A ++F +M      P+  TY+ +I GL K   + +A++LF+  EM    F  + 
Sbjct: 425 KGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQALELFN--EMGHKGFNPDK 482

Query: 440 IFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYM 499
           I+  L + L     ++ A +   KL   G+ P  V Y+ ++ GLCR GK E A D + YM
Sbjct: 483 IYQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNAILLGLCRNGKTEFAIDIMAYM 542

Query: 500 EKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKM 534
             +GC P+ +T+  L+ G       ++  ELL K+
Sbjct: 543 VSSGCMPDDLTYVILIEGLAYEGYLNEARELLIKL 577



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 137/484 (28%), Positives = 221/484 (45%), Gaps = 57/484 (11%)

Query: 108 PDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGN 167
           PD    N L+       R LC   R  +A  +     A G    V+ YG L +G+CR G 
Sbjct: 101 PDAALANRLV-------RDLCRRGRPDDAERVVG---ACGPAATVVAYGALTDGYCRAGR 150

Query: 168 LSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPA 227
           L  A R+           G+  + N ++Y+ +I +LC+ G V  A  +  +M  RG  P 
Sbjct: 151 LGDARRV---------VGGMPVQPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPD 201

Query: 228 VVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLE 287
           VV    L+   C    + +   L   M   G  PN +T+NV++D +C  G +++A  LL 
Sbjct: 202 VVTYNILLEATCKGRGYRQAMELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLR 261

Query: 288 LMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLS------------------------ 323
            +   G  P    YN+++ G C   R   A E+                           
Sbjct: 262 NLPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKG 321

Query: 324 -----------MHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYN 372
                      M   GC   +V+YN +ING C+  NV+ AM L  ++ S G +  ++TYN
Sbjct: 322 LLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYN 381

Query: 373 TLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMN 432
           TLL GL  A Q   A++L D M      PD  T+N LI  LC+   + +A+++F  +   
Sbjct: 382 TLLKGLCSAAQWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDK 441

Query: 433 KFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKA 492
                   ++ +I GL KA +LD A ELF+++  KG  P  + Y ++   L     +E+A
Sbjct: 442 GCTPNSITYSTIISGLAKATKLDQALELFNEMGHKGFNPDKI-YQLLAECLNDDDTIEEA 500

Query: 493 NDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVV 552
              +  ++ +G +P+ V +N ++ G  +N KT   ++++  M       +PDD T+ I++
Sbjct: 501 IQTVRKLQDSGISPHTVLYNAILLGLCRNGKTEFAIDIMAYMV--SSGCMPDDLTYVILI 558

Query: 553 DLLA 556
           + LA
Sbjct: 559 EGLA 562



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 113/414 (27%), Positives = 195/414 (47%), Gaps = 15/414 (3%)

Query: 150 PDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLV 209
           PD      L+   CR G    A R+                  + +Y  + D  C+ G +
Sbjct: 101 PDAALANRLVRDLCRRGRPDDAERV---------VGACGPAATVVAYGALTDGYCRAGRL 151

Query: 210 DKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVM 269
             A+ +   + G  + P       LIH  C  G   +   +  +ML  G  P+++T+N++
Sbjct: 152 GDARRV---VGGMPVQPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNIL 208

Query: 270 IDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGC 329
           ++  CKG    +A  L++LM   G  P+  TYN LMDG C  G +D A E+  ++ S GC
Sbjct: 209 LEATCKGRGYRQAMELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGC 268

Query: 330 KHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQK 389
           K + V+YN ++ G C      +A  L  +++         T+N ++  L + G    A +
Sbjct: 269 KPSTVNYNTVLKGLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQ 328

Query: 390 LFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLC 449
           L ++M  +    ++ TYN +I+GLC+   V  A+ L   ++    +  I  +N L+ GLC
Sbjct: 329 LLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLC 388

Query: 450 KAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVV 509
            A +  +A EL   + Q G +P  VT++ +I  LC+KG +  A +    M   GC PN +
Sbjct: 389 SAAQWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSI 448

Query: 510 TFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
           T++T++ G  +  K  + +EL ++M     N    D  + ++ + L  D+   E
Sbjct: 449 TYSTIISGLAKATKLDQALELFNEMGHKGFN---PDKIYQLLAECLNDDDTIEE 499



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 114/458 (24%), Positives = 214/458 (46%), Gaps = 51/458 (11%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
           N  +H  C+ G   + +A      M     +P + ++N+L  A  K R Y   +     +
Sbjct: 171 NPLIHTLCERG--QVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAMELIDLM 228

Query: 102 VSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLING 161
            + G  P+ +T N+L++       G+C E  + +A  L +N+ + G +P  + Y T++ G
Sbjct: 229 RAEGCTPNNVTYNVLMD-------GMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKG 281

Query: 162 FCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKG 221
            C       A  L  +M+    EN      N  +++++I SLC++GL+ +A +L  +M  
Sbjct: 282 LCSAERWGDADELVTEMLR---EN---CPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSK 335

Query: 222 RGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINE 281
            G    +V    +I+G C   N +   GL  +M   G +P+++T+N ++  LC   +  +
Sbjct: 336 HGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAAQWVD 395

Query: 282 ANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILIN 341
           A  L++ M Q G  PD  T+N+L+   C  G +  A E+F  M  KGC    ++Y+ +I+
Sbjct: 396 AEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIIS 455

Query: 342 GYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEP 401
           G  K   +++A+                                   +LF+EM      P
Sbjct: 456 GLAKATKLDQAL-----------------------------------ELFNEMGHKGFNP 480

Query: 402 DLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELF 461
           D   Y +L + L  ++ ++EA++    L+ +       ++N ++ GLC+ G+ + A ++ 
Sbjct: 481 D-KIYQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNAILLGLCRNGKTEFAIDIM 539

Query: 462 HKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYM 499
             +   G +P  +TY I+I GL  +G L +A + L+ +
Sbjct: 540 AYMVSSGCMPDDLTYVILIEGLAYEGYLNEARELLIKL 577



 Score =  112 bits (279), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 86/337 (25%), Positives = 145/337 (43%), Gaps = 27/337 (8%)

Query: 41  LNEFLHENCKSGIINLN-------------EARYFFGYMTHMQPSPPISSFNLLFGAVAK 87
           L       CK   +N N             +A      M      P  ++FN++  ++ +
Sbjct: 260 LRNLPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCR 319

Query: 88  NRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFG 147
                  I    K+   G   + +T N +IN       GLC +  +  A  L   M ++G
Sbjct: 320 KGLLQQAIQLLEKMSKHGCTANIVTYNAIIN-------GLCEQRNVDGAMGLLSKMKSYG 372

Query: 148 VRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEG 207
            +PD++TY TL+ G C       A  L   M     +NG +      +++ +I  LC++G
Sbjct: 373 CKPDIVTYNTLLKGLCSAAQWVDAEELMDNMT----QNGCLPDN--VTFNTLIGFLCQKG 426

Query: 208 LVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFN 267
           L+  A E+F +M  +G  P  +  +T+I G   A   ++   LF EM   G  P+ + + 
Sbjct: 427 LMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQALELFNEMGHKGFNPDKI-YQ 485

Query: 268 VMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSK 327
           ++ +CL     I EA   +  +   G++P    YN+++ G C  G+ + A +I   M S 
Sbjct: 486 LLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNAILLGLCRNGKTEFAIDIMAYMVSS 545

Query: 328 GCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGV 364
           GC    ++Y ILI G      + EA  L  ++ S  V
Sbjct: 546 GCMPDDLTYVILIEGLAYEGYLNEARELLIKLCSRDV 582



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 81/290 (27%), Positives = 133/290 (45%), Gaps = 16/290 (5%)

Query: 38  ETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISF 97
           E   N  ++  C+ G+  L +A      M+    +  I ++N +   + + R+ D  +  
Sbjct: 307 EATFNVVIYSLCRKGL--LQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGL 364

Query: 98  YRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGT 157
             K+ S G  PD +T N L+       +GLC   +  +A  L  NM   G  PD +T+ T
Sbjct: 365 LSKMKSYGCKPDIVTYNTLL-------KGLCSAAQWVDAEELMDNMTQNGCLPDNVTFNT 417

Query: 158 LINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFL 217
           LI   C+ G +  A+ + K+M     + G     N  +YS II  L K   +D+A ELF 
Sbjct: 418 LIGFLCQKGLMVDAIEVFKQMP----DKGCTP--NSITYSTIISGLAKATKLDQALELFN 471

Query: 218 EMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGG 277
           EM  +G NP  +    L          EE      ++ D G  P+ + +N ++  LC+ G
Sbjct: 472 EMGHKGFNPDKIY-QLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNAILLGLCRNG 530

Query: 278 KINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSK 327
           K   A  ++  M+  G  PD  TY  L++G    G ++ ARE+ + + S+
Sbjct: 531 KTEFAIDIMAYMVSSGCMPDDLTYVILIEGLAYEGYLNEARELLIKLCSR 580


>gi|414888175|tpg|DAA64189.1| TPA: hypothetical protein ZEAMMB73_647521 [Zea mays]
          Length = 667

 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 138/449 (30%), Positives = 229/449 (51%), Gaps = 16/449 (3%)

Query: 77  SFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEA 136
           +++    A+ ++   + V      +   G  PD    NI ++C       LC  NR+ +A
Sbjct: 233 TYSRWISALCQSERIELVERLLADMDKFGCFPDIWACNIYVDC-------LCKHNRLHDA 285

Query: 137 TWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSY 196
               +NM   G  PDV+TY T++   C     + A+ L ++MV      GL  K +I + 
Sbjct: 286 LKTLENMWIRGTNPDVVTYTTVVGCLCDNKQFAEAVELWEEMV----RRGL--KPDIVAC 339

Query: 197 SIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLD 256
            ++I  LCK   VD+A EL L M    +   V +   LI GF  +G+  +   +   M  
Sbjct: 340 GVLIFGLCKSDKVDEAFELALRMLSLNLELNVCIYNALISGFLRSGSINKAFKIISVMRT 399

Query: 257 LGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGL-NPDRFTYNSLMDGYCLVGRID 315
            G  P+++T+N+ ++  C  G I EA  L+E M   G+ NPDR++YN ++ G C   ++D
Sbjct: 400 NGCEPDVVTYNIRLNHYCNTGMIKEAEKLIEEMEMSGIVNPDRYSYNQMLKGLCKAHQLD 459

Query: 316 TAREIFLSMHSK-GCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTL 374
            A   F+S H + G    +VS NILI+ +CK   V  A+ L++++   G++   +TY TL
Sbjct: 460 RAFG-FVSDHMEVGGFCDIVSCNILIDAFCKAKKVSSALKLFKEMGYKGIQADAVTYGTL 518

Query: 375 LSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKF 434
           ++GL+  G    A+++F++M    V P+++ YNI++  LCK    ++A K+F  +   + 
Sbjct: 519 INGLYGVGYYYLAEEIFEQMLKARVVPNVNLYNIMLHNLCKAGQFEQAQKIFLQMIQKEV 578

Query: 435 EFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKAND 494
              I  FN LI  L K  R   A +LF  +  +G+ P  +T+  +I GL  +GK  +A +
Sbjct: 579 SPDIITFNTLIYWLGKCSRAIEAIDLFRDMTARGIEPDSLTFRYLISGLLEEGKATQAYE 638

Query: 495 FLLYMEKNGCAPNVVTFNTLMHGFLQNNK 523
              YM +NG   +    + L+  F  NNK
Sbjct: 639 VWEYMLENGIILDRDVSDRLISMFKSNNK 667



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 126/462 (27%), Positives = 211/462 (45%), Gaps = 18/462 (3%)

Query: 78  FNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEAT 137
           +N   G + KN  +D V  +Y   +  G      T +  I+        LC   RI+   
Sbjct: 199 YNRFIGVLVKNCCFDLVEKYYSVALDKGFCLTSFTYSRWIS-------ALCQSERIELVE 251

Query: 138 WLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN--IFS 195
            L  +M  FG  PD+      ++  C+   L  AL+          EN  I  TN  + +
Sbjct: 252 RLLADMDKFGCFPDIWACNIYVDCLCKHNRLHDALK--------TLENMWIRGTNPDVVT 303

Query: 196 YSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEML 255
           Y+ ++  LC      +A EL+ EM  RG+ P +V C  LI G C +   +E   L + ML
Sbjct: 304 YTTVVGCLCDNKQFAEAVELWEEMVRRGLKPDIVACGVLIFGLCKSDKVDEAFELALRML 363

Query: 256 DLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRID 315
            L    N+  +N +I    + G IN+A  ++ +M   G  PD  TYN  ++ YC  G I 
Sbjct: 364 SLNLELNVCIYNALISGFLRSGSINKAFKIISVMRTNGCEPDVVTYNIRLNHYCNTGMIK 423

Query: 316 TAREIFLSMHSKGCKH-TVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTL 374
            A ++   M   G  +    SYN ++ G CK   ++ A       +  G    +++ N L
Sbjct: 424 EAEKLIEEMEMSGIVNPDRYSYNQMLKGLCKAHQLDRAFGFVSDHMEVGGFCDIVSCNIL 483

Query: 375 LSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKF 434
           +    +A +   A KLF EM    ++ D  TY  LI+GL        A ++F  +   + 
Sbjct: 484 IDAFCKAKKVSSALKLFKEMGYKGIQADAVTYGTLINGLYGVGYYYLAEEIFEQMLKARV 543

Query: 435 EFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKAND 494
              + ++N ++  LCKAG+ + A ++F ++ QK + P ++T++ +I+ L +  +  +A D
Sbjct: 544 VPNVNLYNIMLHNLCKAGQFEQAQKIFLQMIQKEVSPDIITFNTLIYWLGKCSRAIEAID 603

Query: 495 FLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAE 536
               M   G  P+ +TF  L+ G L+  K ++  E+   M E
Sbjct: 604 LFRDMTARGIEPDSLTFRYLISGLLEEGKATQAYEVWEYMLE 645



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 124/461 (26%), Positives = 208/461 (45%), Gaps = 52/461 (11%)

Query: 140 FKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSII 199
           F  M+  G R   + Y   I    +    +    L +K  S   + G    +  F+YS  
Sbjct: 184 FDEMVTSGCREFGVDYNRFIGVLVK----NCCFDLVEKYYSVALDKGFCLTS--FTYSRW 237

Query: 200 IDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGP 259
           I +LC+   ++  + L  +M   G  P +  C   +   C      +       M   G 
Sbjct: 238 ISALCQSERIELVERLLADMDKFGCFPDIWACNIYVDCLCKHNRLHDALKTLENMWIRGT 297

Query: 260 RPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTARE 319
            P+++T+  ++ CLC   +  EA  L E M++RGL PD      L+ G C   ++D A E
Sbjct: 298 NPDVVTYTTVVGCLCDNKQFAEAVELWEEMVRRGLKPDIVACGVLIFGLCKSDKVDEAFE 357

Query: 320 IFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLF 379
           + L M S   +  V  YN LI+G+ +  ++ +A  +   + +NG    V+TYN  L+   
Sbjct: 358 LALRMLSLNLELNVCIYNALISGFLRSGSINKAFKIISVMRTNGCEPDVVTYNIRLNHYC 417

Query: 380 QAGQAGYAQKLFDEMKLYN-VEPDLSTYNILIDGLCKNNCVQEAVKLF--HMLEMNKFEF 436
             G    A+KL +EM++   V PD  +YN ++ GLCK + +  A      HM E+  F  
Sbjct: 418 NTGMIKEAEKLIEEMEMSGIVNPDRYSYNQMLKGLCKAHQLDRAFGFVSDHM-EVGGF-- 474

Query: 437 GIEIFNC--LIDGLCKAGRLDNAWELFHKLPQKGL------------------------- 469
             +I +C  LID  CKA ++ +A +LF ++  KG+                         
Sbjct: 475 -CDIVSCNILIDAFCKAKKVSSALKLFKEMGYKGIQADAVTYGTLINGLYGVGYYYLAEE 533

Query: 470 ----------VPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFL 519
                     VP V  Y+IM+H LC+ G+ E+A    L M +   +P+++TFNTL++   
Sbjct: 534 IFEQMLKARVVPNVNLYNIMLHNLCKAGQFEQAQKIFLQMIQKEVSPDIITFNTLIYWLG 593

Query: 520 QNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEK 560
           + ++  + ++L   M    R + PD  TF  ++  L ++ K
Sbjct: 594 KCSRAIEAIDLFRDMT--ARGIEPDSLTFRYLISGLLEEGK 632



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 103/361 (28%), Positives = 186/361 (51%), Gaps = 15/361 (4%)

Query: 72  SPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVEN 131
           +P + ++  + G +  N+ +   +  + ++V  GL PD +   +LI        GLC  +
Sbjct: 298 NPDVVTYTTVVGCLCDNKQFAEAVELWEEMVRRGLKPDIVACGVLIF-------GLCKSD 350

Query: 132 RIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKT 191
           ++ EA  L   M++  +  +V  Y  LI+GF R+G+++ A     K++S    NG   + 
Sbjct: 351 KVDEAFELALRMLSLNLELNVCIYNALISGFLRSGSINKAF----KIISVMRTNG--CEP 404

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGI-NPAVVVCTTLIHGFCCAGNWEEVNGL 250
           ++ +Y+I ++  C  G++ +A++L  EM+  GI NP       ++ G C A   +   G 
Sbjct: 405 DVVTYNIRLNHYCNTGMIKEAEKLIEEMEMSGIVNPDRYSYNQMLKGLCKAHQLDRAFGF 464

Query: 251 FIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCL 310
             + +++G   ++++ N++ID  CK  K++ A  L + M  +G+  D  TY +L++G   
Sbjct: 465 VSDHMEVGGFCDIVSCNILIDAFCKAKKVSSALKLFKEMGYKGIQADAVTYGTLINGLYG 524

Query: 311 VGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVIT 370
           VG    A EIF  M        V  YNI+++  CK    E+A  ++ Q+I   V   +IT
Sbjct: 525 VGYYYLAEEIFEQMLKARVVPNVNLYNIMLHNLCKAGQFEQAQKIFLQMIQKEVSPDIIT 584

Query: 371 YNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLF-HML 429
           +NTL+  L +  +A  A  LF +M    +EPD  T+  LI GL +     +A +++ +ML
Sbjct: 585 FNTLIYWLGKCSRAIEAIDLFRDMTARGIEPDSLTFRYLISGLLEEGKATQAYEVWEYML 644

Query: 430 E 430
           E
Sbjct: 645 E 645



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 83/314 (26%), Positives = 152/314 (48%), Gaps = 4/314 (1%)

Query: 216 FLE-MKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLC 274
           FLE ++ +G+     +   L+ G+  AG ++ V   F EM+  G R   + +N  I  L 
Sbjct: 148 FLERVRSQGVALHRSLYRILLSGYVRAGKFDSVIHTFDEMVTSGCREFGVDYNRFIGVLV 207

Query: 275 KGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVV 334
           K    +       + + +G     FTY+  +   C   RI+    +   M   GC   + 
Sbjct: 208 KNCCFDLVEKYYSVALDKGFCLTSFTYSRWISALCQSERIELVERLLADMDKFGCFPDIW 267

Query: 335 SYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEM 394
           + NI ++  CK   + +A+     +   G    V+TY T++  L    Q   A +L++EM
Sbjct: 268 ACNIYVDCLCKHNRLHDALKTLENMWIRGTNPDVVTYTTVVGCLCDNKQFAEAVELWEEM 327

Query: 395 KLYNVEPDLSTYNILIDGLCKNNCVQEAVKL-FHMLEMNKFEFGIEIFNCLIDGLCKAGR 453
               ++PD+    +LI GLCK++ V EA +L   ML +N  E  + I+N LI G  ++G 
Sbjct: 328 VRRGLKPDIVACGVLIFGLCKSDKVDEAFELALRMLSLN-LELNVCIYNALISGFLRSGS 386

Query: 454 LDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCA-PNVVTFN 512
           ++ A+++   +   G  P VVTY+I ++  C  G +++A   +  ME +G   P+  ++N
Sbjct: 387 INKAFKIISVMRTNGCEPDVVTYNIRLNHYCNTGMIKEAEKLIEEMEMSGIVNPDRYSYN 446

Query: 513 TLMHGFLQNNKTSK 526
            ++ G  + ++  +
Sbjct: 447 QMLKGLCKAHQLDR 460



 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 70/266 (26%), Positives = 124/266 (46%), Gaps = 2/266 (0%)

Query: 285 LLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYC 344
            LE +  +G+   R  Y  L+ GY   G+ D+    F  M + GC+   V YN  I    
Sbjct: 148 FLERVRSQGVALHRSLYRILLSGYVRAGKFDSVIHTFDEMVTSGCREFGVDYNRFIGVLV 207

Query: 345 KILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLS 404
           K    +     Y   +  G   T  TY+  +S L Q+ +    ++L  +M  +   PD+ 
Sbjct: 208 KNCCFDLVEKYYSVALDKGFCLTSFTYSRWISALCQSERIELVERLLADMDKFGCFPDIW 267

Query: 405 TYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKL 464
             NI +D LCK+N + +A+K    + +      +  +  ++  LC   +   A EL+ ++
Sbjct: 268 ACNIYVDCLCKHNRLHDALKTLENMWIRGTNPDVVTYTTVVGCLCDNKQFAEAVELWEEM 327

Query: 465 PQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKT 524
            ++GL P +V   ++I GLC+  K+++A +  L M       NV  +N L+ GFL++   
Sbjct: 328 VRRGLKPDIVACGVLIFGLCKSDKVDEAFELALRMLSLNLELNVCIYNALISGFLRSGSI 387

Query: 525 SKVVELLHKMAEPERNLVPDDTTFSI 550
           +K  +++  M        PD  T++I
Sbjct: 388 NKAFKIISVMR--TNGCEPDVVTYNI 411



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 34/135 (25%), Positives = 63/135 (46%), Gaps = 11/135 (8%)

Query: 59  ARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILIN 118
           A   F  M   +  P ++ +N++   + K   ++     + +++   + PD +T N LI 
Sbjct: 531 AEEIFEQMLKARVVPNVNLYNIMLHNLCKAGQFEQAQKIFLQMIQKEVSPDIITFNTLIY 590

Query: 119 CFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKM 178
             G   R +       EA  LF++M A G+ PD +T+  LI+G    G  + A  + + M
Sbjct: 591 WLGKCSRAI-------EAIDLFRDMTARGIEPDSLTFRYLISGLLEEGKATQAYEVWEYM 643

Query: 179 VSGDYENGLISKTNI 193
           +    ENG+I   ++
Sbjct: 644 L----ENGIILDRDV 654



 Score = 45.4 bits (106), Expect = 0.096,   Method: Compositional matrix adjust.
 Identities = 35/121 (28%), Positives = 54/121 (44%), Gaps = 9/121 (7%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
           N  LH  CK+G     +A+  F  M   + SP I +FN L   + K       I  +R +
Sbjct: 551 NIMLHNLCKAG--QFEQAQKIFLQMIQKEVSPDIITFNTLIYWLGKCSRAIEAIDLFRDM 608

Query: 102 VSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLING 161
            + G+ PD LT   LI+       GL  E +  +A  +++ M+  G+  D      LI+ 
Sbjct: 609 TARGIEPDSLTFRYLIS-------GLLEEGKATQAYEVWEYMLENGIILDRDVSDRLISM 661

Query: 162 F 162
           F
Sbjct: 662 F 662


>gi|413924821|gb|AFW64753.1| hypothetical protein ZEAMMB73_344298 [Zea mays]
          Length = 698

 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 127/442 (28%), Positives = 221/442 (50%), Gaps = 9/442 (2%)

Query: 125 RGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYE 184
           RGLC+E R++E   L +     G  P  + Y  LI+G+CR G++   L L  +M +    
Sbjct: 89  RGLCLEGRVEEGRGLIEARWGEGCVPGAVFYNVLIDGYCRRGDIGRGLLLLGEMET---- 144

Query: 185 NGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNW 244
            G+I    + +Y  II  L ++G + K + L  EM+ RG++P V +  T+I+  C   + 
Sbjct: 145 KGIIP--TVVTYGAIIHWLGRKGDLTKVESLLGEMRARGLSPNVQIYNTVINALCKCRSA 202

Query: 245 EEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSL 304
            + + +  +M+     P+++TFN MI   C+ G + EA  LL   I+RGL P++ +Y  L
Sbjct: 203 SQASDMLNQMVKSRFNPDVVTFNTMIAGFCREGDVREALKLLREAIRRGLEPNQLSYTPL 262

Query: 305 MDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGV 364
           + G+C+ G    A ++ + M  +G    +++   LI+G      V +A+ +  ++    V
Sbjct: 263 IHGFCVRGEAMVASDLLVEMMGRGHTPDMITLGALIHGLVVSGQVNDALIVREKMAERQV 322

Query: 365 RQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVK 424
                 YN L+SGL +      A+ L +EM    V+PD   Y  LIDG  +++ + +A K
Sbjct: 323 MPDANIYNVLISGLCKKRMLSAAKNLLEEMLEQKVQPDKFIYTTLIDGFVRSDKLSDARK 382

Query: 425 LFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLC 484
           +F  +E  K    I  +N +I G CK G +  A      + + G +P   TY+ ++ G  
Sbjct: 383 IFEFME-EKACPDIVAYNVMIKGYCKFGMMKEAVTCMSSMRKAGCIPDEFTYTTLVDGYA 441

Query: 485 RKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPD 544
           +KG +  +   L  M K  C PN+ T+ +L+ G+     T    +L  KM      L P+
Sbjct: 442 KKGDISASLRLLCDMMKRRCKPNIFTYASLICGYCNIGDTYSAEDLFAKMQ--SEGLFPN 499

Query: 545 DTTFSIVVDLLAKDEKYHECSA 566
              +++++  L K +K  + +A
Sbjct: 500 VVHYTVLIGSLFKKDKVIQAAA 521



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 159/568 (27%), Positives = 254/568 (44%), Gaps = 53/568 (9%)

Query: 19  VKLSSLFKSPRQIAAVSSPETQL-NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISS 77
            K+ SL    R  A   SP  Q+ N  ++  CK    + ++A      M   + +P + +
Sbjct: 168 TKVESLLGEMR--ARGLSPNVQIYNTVINALCKCR--SASQASDMLNQMVKSRFNPDVVT 223

Query: 78  FNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEAT 137
           FN +     +       +   R+ +  GL P+ L+   LI+       G CV      A+
Sbjct: 224 FNTMIAGFCREGDVREALKLLREAIRRGLEPNQLSYTPLIH-------GFCVRGEAMVAS 276

Query: 138 WLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYS 197
            L   M+  G  PD+IT G LI+G   +G ++ AL + +KM     E  ++   NI  Y+
Sbjct: 277 DLLVEMMGRGHTPDMITLGALIHGLVVSGQVNDALIVREKMA----ERQVMPDANI--YN 330

Query: 198 IIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDL 257
           ++I  LCK+ ++  AK L  EM  + + P   + TTLI GF  +    +   +F E ++ 
Sbjct: 331 VLISGLCKKRMLSAAKNLLEEMLEQKVQPDKFIYTTLIDGFVRSDKLSDARKIF-EFMEE 389

Query: 258 GPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTA 317
              P+++ +NVMI   CK G + EA   +  M + G  PD FTY +L+DGY   G I  +
Sbjct: 390 KACPDIVAYNVMIKGYCKFGMMKEAVTCMSSMRKAGCIPDEFTYTTLVDGYAKKGDISAS 449

Query: 318 REIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSG 377
             +   M  + CK  + +Y  LI GYC I +   A  L+ ++ S G+   V+ Y  L+  
Sbjct: 450 LRLLCDMMKRRCKPNIFTYASLICGYCNIGDTYSAEDLFAKMQSEGLFPNVVHYTVLIGS 509

Query: 378 LFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFG 437
           LF+  +   A   F+ M L +  P+ +T + L++GL   NC    V           E  
Sbjct: 510 LFKKDKVIQAAAYFEHMLLNHCPPNDATVHYLVNGLV--NCRHGMVNSNRSDTKQAHE-- 565

Query: 438 IEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLL 497
                       K+  LD    +F  L   GL P +  Y+ +I  LCR   L KA D   
Sbjct: 566 ------------KSALLD----VFRGLISDGLDPRISAYNAIIFSLCRHNMLGKAMDLKD 609

Query: 498 YMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDD---TTFSIVVDL 554
            M   GC P+ +TF +L++GF    ++ K            R+ +P++     F I+   
Sbjct: 610 KMSNKGCLPDPITFLSLLYGFSSAGESGKW-----------RSALPNEFQQDEFEIITKY 658

Query: 555 LAKDEKYHECSAVSKSSYRACLYVTIFQ 582
           +A   ++   S V + S    LY   FQ
Sbjct: 659 MALFNQHVTSSVVGEVSRILQLYSEEFQ 686



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 134/481 (27%), Positives = 222/481 (46%), Gaps = 57/481 (11%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
           N  +   C+ G  ++       G M      P + ++  +   + +      V S   ++
Sbjct: 120 NVLIDGYCRRG--DIGRGLLLLGEMETKGIIPTVVTYGAIIHWLGRKGDLTKVESLLGEM 177

Query: 102 VSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLING 161
            + GL P+    N +IN        LC      +A+ +   M+     PDV+T+ T+I G
Sbjct: 178 RARGLSPNVQIYNTVIN-------ALCKCRSASQASDMLNQMVKSRFNPDVVTFNTMIAG 230

Query: 162 FCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKG 221
           FCR G++  AL+L ++ +    E       N  SY+ +I   C  G    A +L +EM G
Sbjct: 231 FCREGDVREALKLLREAIRRGLE------PNQLSYTPLIHGFCVRGEAMVASDLLVEMMG 284

Query: 222 RGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPR---PNLLTFNVMIDCLCKGGK 278
           RG  P ++    LIHG   +G   +VN   I    +  R   P+   +NV+I  LCK   
Sbjct: 285 RGHTPDMITLGALIHGLVVSG---QVNDALIVREKMAERQVMPDANIYNVLISGLCKKRM 341

Query: 279 INEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNI 338
           ++ A  LLE M+++ + PD+F Y +L+DG+    ++  AR+IF  M  K C   +V+YN+
Sbjct: 342 LSAAKNLLEEMLEQKVQPDKFIYTTLIDGFVRSDKLSDARKIFEFMEEKACPD-IVAYNV 400

Query: 339 LINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYN 398
           +I GYCK   ++EA+                   T +S + +AG                
Sbjct: 401 MIKGYCKFGMMKEAV-------------------TCMSSMRKAG---------------- 425

Query: 399 VEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAW 458
             PD  TY  L+DG  K   +  +++L   +   + +  I  +  LI G C  G   +A 
Sbjct: 426 CIPDEFTYTTLVDGYAKKGDISASLRLLCDMMKRRCKPNIFTYASLICGYCNIGDTYSAE 485

Query: 459 ELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGF 518
           +LF K+  +GL P VV Y+++I  L +K K+ +A  +  +M  N C PN  T + L++G 
Sbjct: 486 DLFAKMQSEGLFPNVVHYTVLIGSLFKKDKVIQAAAYFEHMLLNHCPPNDATVHYLVNGL 545

Query: 519 L 519
           +
Sbjct: 546 V 546



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 116/419 (27%), Positives = 206/419 (49%), Gaps = 9/419 (2%)

Query: 134 KEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNI 193
           + A  L+  M+      D  +   ++ G C  G +       + ++   +  G +    +
Sbjct: 63  ERARGLYGEMLVREGGADDYSTCVMVRGLCLEGRVEEG----RGLIEARWGEGCVPGA-V 117

Query: 194 FSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIE 253
           F Y+++ID  C+ G + +   L  EM+ +GI P VV    +IH     G+  +V  L  E
Sbjct: 118 F-YNVLIDGYCRRGDIGRGLLLLGEMETKGIIPTVVTYGAIIHWLGRKGDLTKVESLLGE 176

Query: 254 MLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGR 313
           M   G  PN+  +N +I+ LCK    ++A+ +L  M++   NPD  T+N+++ G+C  G 
Sbjct: 177 MRARGLSPNVQIYNTVINALCKCRSASQASDMLNQMVKSRFNPDVVTFNTMIAGFCREGD 236

Query: 314 IDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNT 373
           +  A ++      +G +   +SY  LI+G+C       A  L  +++  G    +IT   
Sbjct: 237 VREALKLLREAIRRGLEPNQLSYTPLIHGFCVRGEAMVASDLLVEMMGRGHTPDMITLGA 296

Query: 374 LLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNK 433
           L+ GL  +GQ   A  + ++M    V PD + YN+LI GLCK   +  A  L   +   K
Sbjct: 297 LIHGLVVSGQVNDALIVREKMAERQVMPDANIYNVLISGLCKKRMLSAAKNLLEEMLEQK 356

Query: 434 FEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKAN 493
            +    I+  LIDG  ++ +L +A ++F  + +K   P +V Y++MI G C+ G +++A 
Sbjct: 357 VQPDKFIYTTLIDGFVRSDKLSDARKIFEFMEEKA-CPDIVAYNVMIKGYCKFGMMKEAV 415

Query: 494 DFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVV 552
             +  M K GC P+  T+ TL+ G+ +    S  + LL  M   +R   P+  T++ ++
Sbjct: 416 TCMSSMRKAGCIPDEFTYTTLVDGYAKKGDISASLRLLCDMM--KRRCKPNIFTYASLI 472



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 78/277 (28%), Positives = 148/277 (53%), Gaps = 2/277 (0%)

Query: 281 EANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILI 340
            A GL   M+ R    D ++   ++ G CL GR++  R +  +   +GC    V YN+LI
Sbjct: 64  RARGLYGEMLVREGGADDYSTCVMVRGLCLEGRVEEGRGLIEARWGEGCVPGAVFYNVLI 123

Query: 341 NGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVE 400
           +GYC+  ++   + L  ++ + G+  TV+TY  ++  L + G     + L  EM+   + 
Sbjct: 124 DGYCRRGDIGRGLLLLGEMETKGIIPTVVTYGAIIHWLGRKGDLTKVESLLGEMRARGLS 183

Query: 401 PDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWEL 460
           P++  YN +I+ LCK     +A  + + +  ++F   +  FN +I G C+ G +  A +L
Sbjct: 184 PNVQIYNTVINALCKCRSASQASDMLNQMVKSRFNPDVVTFNTMIAGFCREGDVREALKL 243

Query: 461 FHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQ 520
             +  ++GL P  ++Y+ +IHG C +G+   A+D L+ M   G  P+++T   L+HG + 
Sbjct: 244 LREAIRRGLEPNQLSYTPLIHGFCVRGEAMVASDLLVEMMGRGHTPDMITLGALIHGLVV 303

Query: 521 NNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAK 557
           + + +  + +  KMA  ER ++PD   +++++  L K
Sbjct: 304 SGQVNDALIVREKMA--ERQVMPDANIYNVLISGLCK 338


>gi|356518050|ref|XP_003527697.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g11690-like [Glycine max]
          Length = 556

 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 140/474 (29%), Positives = 241/474 (50%), Gaps = 20/474 (4%)

Query: 38  ETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISF 97
           +T +N ++H +      + ++A  F  +M H    P  ++FN L   + ++ ++D     
Sbjct: 93  DTIVNAYVHSH------STDQALTFLHHMIHEGHVPLSNTFNNLMCLLIRSNYFDKAWWI 146

Query: 98  YRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGT 157
           + +L S  +L  +         FG   +G C      +   L   +  FG+ P+V+ Y T
Sbjct: 147 FNELKSKVVLDAY--------SFGIMIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTT 198

Query: 158 LINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFL 217
           LI+G C+ GN+ +A  L  KM       GL+   N  +YS++++   K+GL  +  +++ 
Sbjct: 199 LIDGCCKYGNVMLAKNLFCKMD----RLGLVP--NPHTYSVLMNGFFKQGLQREGFQMYE 252

Query: 218 EMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGG 277
            MK  GI P       LI  +C  G  ++   +F EM + G    ++T+N++I  LC+G 
Sbjct: 253 NMKRSGIVPNAYAYNCLISEYCNGGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGK 312

Query: 278 KINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYN 337
           K  EA  L+  + + GL+P+  TYN L++G+C VG++DTA  +F  + S G   T+V+YN
Sbjct: 313 KFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYN 372

Query: 338 ILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLY 397
            LI GY K+ N+  A+ L +++    +  + +TY  L+    +      A ++   M+  
Sbjct: 373 TLIAGYSKVENLAGALDLVKEMEERCIAPSKVTYTILIDAFARLNYTEKACEMHSLMEKS 432

Query: 398 NVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNA 457
            + PD+ TY++LI GLC +  ++EA KLF  L     +    I+N +I G CK G    A
Sbjct: 433 GLVPDVYTYSVLIHGLCVHGNMKEASKLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRA 492

Query: 458 WELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTF 511
             L +++   G+VP V ++   I  LCR  K ++A   L  M  +G  P+V  +
Sbjct: 493 LRLLNEMVHSGMVPNVASFCSTIGLLCRDEKWKEAELLLGQMINSGLKPSVSLY 546



 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 124/381 (32%), Positives = 199/381 (52%), Gaps = 4/381 (1%)

Query: 185 NGLISKT--NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAG 242
           N L SK   + +S+ I+I   C+ G   K   L   ++  G++P VV+ TTLI G C  G
Sbjct: 148 NELKSKVVLDAYSFGIMIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTTLIDGCCKYG 207

Query: 243 NWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYN 302
           N      LF +M  LG  PN  T++V+++   K G   E   + E M + G+ P+ + YN
Sbjct: 208 NVMLAKNLFCKMDRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNAYAYN 267

Query: 303 SLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISN 362
            L+  YC  G +D A ++F  M  KG    V++YNILI G C+     EA+ L  ++   
Sbjct: 268 CLISEYCNGGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKV 327

Query: 363 GVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEA 422
           G+   ++TYN L++G    G+   A +LF+++K   + P L TYN LI G  K   +  A
Sbjct: 328 GLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGA 387

Query: 423 VKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHG 482
           + L   +E          +  LID   +    + A E+   + + GLVP V TYS++IHG
Sbjct: 388 LDLVKEMEERCIAPSKVTYTILIDAFARLNYTEKACEMHSLMEKSGLVPDVYTYSVLIHG 447

Query: 483 LCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLV 542
           LC  G +++A+     + +    PN V +NT++HG+ +   + + + LL++M      +V
Sbjct: 448 LCVHGNMKEASKLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMV--HSGMV 505

Query: 543 PDDTTFSIVVDLLAKDEKYHE 563
           P+  +F   + LL +DEK+ E
Sbjct: 506 PNVASFCSTIGLLCRDEKWKE 526



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 136/454 (29%), Positives = 219/454 (48%), Gaps = 15/454 (3%)

Query: 78  FNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEAT 137
           ++ +  A   +   D  ++F   ++  G +P       L N F N    L   N   +A 
Sbjct: 92  YDTIVNAYVHSHSTDQALTFLHHMIHEGHVP-------LSNTFNNLMCLLIRSNYFDKAW 144

Query: 138 WLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYS 197
           W+F N +   V  D  ++G +I G C  G      RL   +     E GL    N+  Y+
Sbjct: 145 WIF-NELKSKVVLDAYSFGIMIKGCCEAGYFVKGFRLLAML----EEFGL--SPNVVIYT 197

Query: 198 IIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDL 257
            +ID  CK G V  AK LF +M   G+ P     + L++GF   G   E   ++  M   
Sbjct: 198 TLIDGCCKYGNVMLAKNLFCKMDRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRS 257

Query: 258 GPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTA 317
           G  PN   +N +I   C GG +++A  +   M ++G+     TYN L+ G C   +   A
Sbjct: 258 GIVPNAYAYNCLISEYCNGGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEA 317

Query: 318 REIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSG 377
            ++   ++  G    +V+YNILING+C +  ++ A+ L+ Q+ S+G+  T++TYNTL++G
Sbjct: 318 VKLVHKVNKVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAG 377

Query: 378 LFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFG 437
             +      A  L  EM+   + P   TY ILID   + N  ++A ++  ++E +     
Sbjct: 378 YSKVENLAGALDLVKEMEERCIAPSKVTYTILIDAFARLNYTEKACEMHSLMEKSGLVPD 437

Query: 438 IEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLL 497
           +  ++ LI GLC  G +  A +LF  L +  L P  V Y+ MIHG C++G   +A   L 
Sbjct: 438 VYTYSVLIHGLCVHGNMKEASKLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLN 497

Query: 498 YMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELL 531
            M  +G  PNV +F + + G L  ++  K  ELL
Sbjct: 498 EMVHSGMVPNVASFCSTI-GLLCRDEKWKEAELL 530



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 68/257 (26%), Positives = 124/257 (48%), Gaps = 12/257 (4%)

Query: 312 GRIDTAREIFLSM-HSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVIT 370
           GRI ++  + L+  H   C      Y+ ++N Y    + ++A++    +I  G      T
Sbjct: 67  GRIPSSLMLQLTQAHFTPCLTYTPLYDTIVNAYVHSHSTDQALTFLHHMIHEGHVPLSNT 126

Query: 371 YNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLE 430
           +N L+  L ++     A  +F+E+K   V  D  ++ I+I G C+     +  +L  MLE
Sbjct: 127 FNNLMCLLIRSNYFDKAWWIFNELK-SKVVLDAYSFGIMIKGCCEAGYFVKGFRLLAMLE 185

Query: 431 MNKFEFGIE----IFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRK 486
               EFG+     I+  LIDG CK G +  A  LF K+ + GLVP   TYS++++G  ++
Sbjct: 186 ----EFGLSPNVVIYTTLIDGCCKYGNVMLAKNLFCKMDRLGLVPNPHTYSVLMNGFFKQ 241

Query: 487 GKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDT 546
           G   +       M+++G  PN   +N L+  +       K  ++  +M   E+ +     
Sbjct: 242 GLQREGFQMYENMKRSGIVPNAYAYNCLISEYCNGGMVDKAFKVFAEMR--EKGIACGVM 299

Query: 547 TFSIVVDLLAKDEKYHE 563
           T++I++  L + +K+ E
Sbjct: 300 TYNILIGGLCRGKKFGE 316


>gi|297736854|emb|CBI26055.3| unnamed protein product [Vitis vinifera]
          Length = 653

 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 148/548 (27%), Positives = 246/548 (44%), Gaps = 41/548 (7%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CK+    L+EA   F  +   +  P   ++N +         +D       +  + G +P
Sbjct: 66  CKAN--RLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIP 123

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
             +  N ++ C G K R       ++EA  +F+ M    V P+V TY  LI+  CR G L
Sbjct: 124 SVIAYNCILTCLGKKRR-------VEEALRIFEEMKRDAV-PNVPTYNILIDMLCREGKL 175

Query: 169 SVALRLHKKM-VSGDYENGL----------------------------ISKTNIFSYSII 199
           + AL +   M  +G + N L                            +   N  ++S +
Sbjct: 176 NAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSL 235

Query: 200 IDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGP 259
           ID L K G VD A  L+ +M   G  P  +V T+LI  F   G  E+ + ++ EM+  G 
Sbjct: 236 IDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGC 295

Query: 260 RPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTARE 319
            P+L   N  +DC+ K G+  +   L   +   G  PD  +Y+ L+ G    G  +   E
Sbjct: 296 SPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYE 355

Query: 320 IFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLF 379
           +F +M  +GC     +YN +I+G+CK   V +A  L  ++   G   TV+TY +++ GL 
Sbjct: 356 LFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLA 415

Query: 380 QAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIE 439
           +  +   A  LF+E K   ++ ++  Y+ LIDG  K   + EA  +   L        + 
Sbjct: 416 KIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVY 475

Query: 440 IFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYM 499
            +NCL+D L KA  ++ A   F  +      P  +TYSI+I+GLCR  K  KA  F   M
Sbjct: 476 TWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSILINGLCRVRKFNKAFVFWQEM 535

Query: 500 EKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDE 559
           +K G  PN +T+ T++ G  +     +   L  +        +PD  +++ +++ L+   
Sbjct: 536 QKLGLKPNTITYTTMISGLAKAGNILEASGLFSRF--KANGGIPDSASYNAMIEGLSSAN 593

Query: 560 KYHECSAV 567
           K  +  A+
Sbjct: 594 KAMDAYAL 601



 Score =  207 bits (528), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 125/461 (27%), Positives = 234/461 (50%), Gaps = 13/461 (2%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
           P + ++N+L   + +    +A +     +   GL P+ LT+NI+I+        LC   +
Sbjct: 157 PNVPTYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMID-------RLCKAQK 209

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
           ++EA  +F+ M      P+ +T+ +LI+G  + G +  A  L++KM+   +  G I    
Sbjct: 210 LEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIV--- 266

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
              Y+ +I S  K G  +   +++ EM   G +P + +  T +     AG  E+   LF 
Sbjct: 267 ---YTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFR 323

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
           E+   G  P+  +++++I  L K G  NE   L   M ++G   D   YN+++DG+C  G
Sbjct: 324 EINAHGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSG 383

Query: 313 RIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYN 372
           +++ A ++   M  KG   TVV+Y  +I+G  KI  ++EA  L+ +  SNG++  V+ Y+
Sbjct: 384 KVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYS 443

Query: 373 TLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMN 432
           +L+ G  + G+   A  + +E+    + P++ T+N L+D L K   + EA+  F  ++  
Sbjct: 444 SLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDL 503

Query: 433 KFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKA 492
           K       ++ LI+GLC+  + + A+  + ++ + GL P  +TY+ MI GL + G + +A
Sbjct: 504 KCPPNQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEA 563

Query: 493 NDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHK 533
           +      + NG  P+  ++N ++ G    NK      L  +
Sbjct: 564 SGLFSRFKANGGIPDSASYNAMIEGLSSANKAMDAYALFEE 604



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 140/494 (28%), Positives = 235/494 (47%), Gaps = 13/494 (2%)

Query: 74  PISSFNL-LFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNK---ERGLCV 129
           P S+ ++ L     K+R         + +      P F    ILI   G        LC 
Sbjct: 8   PSSNISIELVANCVKSRKLREAFDIIQTMRKFKFRPAFSAYTILIGKVGLMLLFPWVLCK 67

Query: 130 ENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLIS 189
            NR+ EA  LF+ +      P    Y T+I G+   G    A  L ++      +    S
Sbjct: 68  ANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLER------QKAKGS 121

Query: 190 KTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNG 249
             ++ +Y+ I+  L K+  V++A  +F EMK R   P V     LI   C  G       
Sbjct: 122 IPSVIAYNCILTCLGKKRRVEEALRIFEEMK-RDAVPNVPTYNILIDMLCREGKLNAALE 180

Query: 250 LFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYC 309
           +  +M   G  PN+LT N+MID LCK  K+ EA  + E M  +   P+  T++SL+DG  
Sbjct: 181 IRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLG 240

Query: 310 LVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVI 369
             GR+D A  ++  M   G     + Y  LI  + K    E+   +Y++++  G    + 
Sbjct: 241 KCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLT 300

Query: 370 TYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHML 429
             NT +  +F+AG+    + LF E+  +   PD  +Y+ILI GL K     E  +LF+ +
Sbjct: 301 LINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYAM 360

Query: 430 EMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKL 489
           +          +N +IDG CK+G+++ A++L  ++  KG  PTVVTY  +I GL +  +L
Sbjct: 361 KEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRL 420

Query: 490 EKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFS 549
           ++A       + NG   NVV +++L+ GF +  +  +   ++ ++   ++ L P+  T++
Sbjct: 421 DEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELM--QKGLTPNVYTWN 478

Query: 550 IVVDLLAKDEKYHE 563
            ++D L K E+ +E
Sbjct: 479 CLLDALVKAEEINE 492



 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 51/183 (27%), Positives = 83/183 (45%), Gaps = 13/183 (7%)

Query: 409 LIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDG----------LCKAGRLDNAW 458
           L+    K+  ++EA  +   +   KF      +  LI            LCKA RLD A 
Sbjct: 16  LVANCVKSRKLREAFDIIQTMRKFKFRPAFSAYTILIGKVGLMLLFPWVLCKANRLDEAV 75

Query: 459 ELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGF 518
           ELF +L Q   VP    Y+ MI G    GK ++A   L   +  G  P+V+ +N ++   
Sbjct: 76  ELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIPSVIAYNCILTCL 135

Query: 519 LQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKSSYRACLYV 578
               K  +V E L    E +R+ VP+  T++I++D+L ++ K +    +     RA L+ 
Sbjct: 136 ---GKKRRVEEALRIFEEMKRDAVPNVPTYNILIDMLCREGKLNAALEIRDDMERAGLFP 192

Query: 579 TIF 581
            + 
Sbjct: 193 NVL 195


>gi|449460167|ref|XP_004147817.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g19290-like [Cucumis sativus]
          Length = 942

 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 136/493 (27%), Positives = 238/493 (48%), Gaps = 36/493 (7%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
           P + S N L   + +N      +  Y +++++G+LPD  +  I++N +       C E R
Sbjct: 219 PSLRSCNSLLSNLVQNGEAFKALLVYEQMIALGILPDIFSYTIMVNAY-------CKEGR 271

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVS-GDYEN------ 185
           + EA    K M      P+V+TY +LI+G+   G++  A ++   M   G  EN      
Sbjct: 272 VDEAFNFVKEMERSCCEPNVVTYNSLIDGYVSLGDVCGAKKVLALMSEKGIPENSRTYTL 331

Query: 186 ------------------GLISKTNIFS----YSIIIDSLCKEGLVDKAKELFLEMKGRG 223
                             G + + N+F     Y ++I + C  G VD A  +   M   G
Sbjct: 332 LIKGYCKRGQMEQAEKLIGCMMEKNLFVDEHVYGVLIHAYCTAGRVDDALRIRDAMLKVG 391

Query: 224 INPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEAN 283
           +    V+C +LI+G+C  G+  +   + + M D   +P+   +N ++D  CK     +A 
Sbjct: 392 LKMNTVICNSLINGYCKLGHVNKAAEVLVSMKDWNLKPDSYGYNTLLDGFCKQEDFIKAF 451

Query: 284 GLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGY 343
            L + M  +G+N    TYN+L+     VG ++ A  I+  MH +G     V+Y  L++ +
Sbjct: 452 KLCDEMHNKGVNFTVVTYNTLLKNLFHVGHVEHALHIWNLMHKRGVAPNEVTYCTLLDAF 511

Query: 344 CKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDL 403
            K+   + AM +++  +S G  +++  YNT++ G  +  +   AQ++F +MK     PD 
Sbjct: 512 FKVGTFDRAMMIWKDALSKGFTKSITLYNTMICGFCKMEKLVQAQEIFLKMKELGFPPDE 571

Query: 404 STYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHK 463
            TY  LIDG CK   + EA+KL  M E +      E++N LI G+ ++  L     L  +
Sbjct: 572 ITYRTLIDGYCKVGNLVEALKLKDMSERDGISSSTEMYNSLITGVFRSEELQKLNGLLAE 631

Query: 464 LPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNK 523
           +  + L P VVTY  +I G C KG ++KA +    M   G APN++  + ++    ++ K
Sbjct: 632 MKNRELSPNVVTYGSLIAGWCDKGMMDKAYNAYFKMIDKGIAPNIIIGSKIVSSLYRHGK 691

Query: 524 TSKVVELLHKMAE 536
             +   +LH++A+
Sbjct: 692 IDEANLILHQIAD 704



 Score =  195 bits (495), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 121/418 (28%), Positives = 209/418 (50%), Gaps = 8/418 (1%)

Query: 135 EATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIF 194
           +A  +++ MIA G+ PD+ +Y  ++N +C+ G +  A    K+M     E       N+ 
Sbjct: 239 KALLVYEQMIALGILPDIFSYTIMVNAYCKEGRVDEAFNFVKEMERSCCE------PNVV 292

Query: 195 SYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEM 254
           +Y+ +ID     G V  AK++   M  +GI       T LI G+C  G  E+   L   M
Sbjct: 293 TYNSLIDGYVSLGDVCGAKKVLALMSEKGIPENSRTYTLLIKGYCKRGQMEQAEKLIGCM 352

Query: 255 LDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRI 314
           ++     +   + V+I   C  G++++A  + + M++ GL  +    NSL++GYC +G +
Sbjct: 353 MEKNLFVDEHVYGVLIHAYCTAGRVDDALRIRDAMLKVGLKMNTVICNSLINGYCKLGHV 412

Query: 315 DTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTL 374
           + A E+ +SM     K     YN L++G+CK  +  +A  L  ++ + GV  TV+TYNTL
Sbjct: 413 NKAAEVLVSMKDWNLKPDSYGYNTLLDGFCKQEDFIKAFKLCDEMHNKGVNFTVVTYNTL 472

Query: 375 LSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKF 434
           L  LF  G   +A  +++ M    V P+  TY  L+D   K      A+ ++       F
Sbjct: 473 LKNLFHVGHVEHALHIWNLMHKRGVAPNEVTYCTLLDAFFKVGTFDRAMMIWKDALSKGF 532

Query: 435 EFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKAND 494
              I ++N +I G CK  +L  A E+F K+ + G  P  +TY  +I G C+ G L +A  
Sbjct: 533 TKSITLYNTMICGFCKMEKLVQAQEIFLKMKELGFPPDEITYRTLIDGYCKVGNLVEALK 592

Query: 495 FLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVV 552
                E++G + +   +N+L+ G  ++ +  K+  LL +M    R L P+  T+  ++
Sbjct: 593 LKDMSERDGISSSTEMYNSLITGVFRSEELQKLNGLLAEM--KNRELSPNVVTYGSLI 648



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 135/458 (29%), Positives = 224/458 (48%), Gaps = 19/458 (4%)

Query: 55  NLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLN 114
           ++  A + +  M     +P   ++  L  A  K   +D  +  ++  +S G        N
Sbjct: 481 HVEHALHIWNLMHKRGVAPNEVTYCTLLDAFFKVGTFDRAMMIWKDALSKGFTKSITLYN 540

Query: 115 ILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRL 174
            +I C      G C   ++ +A  +F  M   G  PD ITY TLI+G+C+ GNL  AL+L
Sbjct: 541 TMI-C------GFCKMEKLVQAQEIFLKMKELGFPPDEITYRTLIDGYCKVGNLVEALKL 593

Query: 175 HKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTL 234
            K M   D   G+ S T +  Y+ +I  + +   + K   L  EMK R ++P VV   +L
Sbjct: 594 -KDMSERD---GISSSTEM--YNSLITGVFRSEELQKLNGLLAEMKNRELSPNVVTYGSL 647

Query: 235 IHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGL 294
           I G+C  G  ++    + +M+D G  PN++  + ++  L + GKI+EAN +L  +    +
Sbjct: 648 IAGWCDKGMMDKAYNAYFKMIDKGIAPNIIIGSKIVSSLYRHGKIDEANLILHQIAD--I 705

Query: 295 NPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTV---VSYNILINGYCKILNVEE 351
           +P     +S+      +  ++T ++I  S   K     +   + YNI I G CK  N+++
Sbjct: 706 DPIAAHAHSVELPKSDLRHLET-QKIVDSFGKKAMSIPISNNIVYNIAITGLCKSKNIDD 764

Query: 352 AMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILID 411
              +   ++  G      TY +L+      G+   A  L D+M    + P++  YN LI+
Sbjct: 765 VRRILSDLLLKGFCPDNYTYCSLIHACSAVGKVNEAFCLRDDMINAGLVPNIVVYNALIN 824

Query: 412 GLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVP 471
           GLCK+  +  A +LF+ L        +  +N LIDG CK GR   A EL  K+ ++G+ P
Sbjct: 825 GLCKSGNLDRARRLFNKLARKGLSPTVVTYNTLIDGYCKGGRTTEALELKDKMREEGICP 884

Query: 472 TVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVV 509
           + +TYS +IHGL  +GK E++   L  M K G   +V+
Sbjct: 885 SSITYSTLIHGLYMEGKSEQSVGLLNEMMKAGKGSSVM 922



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 141/537 (26%), Positives = 239/537 (44%), Gaps = 68/537 (12%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
           N  ++  CK G  ++N+A      M      P    +N L     K   +        ++
Sbjct: 400 NSLINGYCKLG--HVNKAAEVLVSMKDWNLKPDSYGYNTLLDGFCKQEDFIKAFKLCDEM 457

Query: 102 VSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLING 161
            + G+    +T N L+       + L     ++ A  ++  M   GV P+ +TY TL++ 
Sbjct: 458 HNKGVNFTVVTYNTLL-------KNLFHVGHVEHALHIWNLMHKRGVAPNEVTYCTLLDA 510

Query: 162 FCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKG 221
           F + G    A+ + K  +S  +        +I  Y+ +I   CK   + +A+E+FL+MK 
Sbjct: 511 FFKVGTFDRAMMIWKDALSKGFTK------SITLYNTMICGFCKMEKLVQAQEIFLKMKE 564

Query: 222 RGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLT----FNVMIDCLCKGG 277
            G  P  +   TLI G+C  GN  E     +++ D+  R  + +    +N +I  + +  
Sbjct: 565 LGFPPDEITYRTLIDGYCKVGNLVEA----LKLKDMSERDGISSSTEMYNSLITGVFRSE 620

Query: 278 KINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYN 337
           ++ + NGLL  M  R L+P+  TY SL+ G+C  G +D A   +  M  KG    ++  +
Sbjct: 621 ELQKLNGLLAEMKNRELSPNVVTYGSLIAGWCDKGMMDKAYNAYFKMIDKGIAPNIIIGS 680

Query: 338 ILINGYCKILNVEEAMSLYRQI-------------------------------------- 359
            +++   +   ++EA  +  QI                                      
Sbjct: 681 KIVSSLYRHGKIDEANLILHQIADIDPIAAHAHSVELPKSDLRHLETQKIVDSFGKKAMS 740

Query: 360 --ISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNN 417
             ISN      I YN  ++GL ++      +++  ++ L    PD  TY  LI       
Sbjct: 741 IPISNN-----IVYNIAITGLCKSKNIDDVRRILSDLLLKGFCPDNYTYCSLIHACSAVG 795

Query: 418 CVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYS 477
            V EA  L   +        I ++N LI+GLCK+G LD A  LF+KL +KGL PTVVTY+
Sbjct: 796 KVNEAFCLRDDMINAGLVPNIVVYNALINGLCKSGNLDRARRLFNKLARKGLSPTVVTYN 855

Query: 478 IMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKM 534
            +I G C+ G+  +A +    M + G  P+ +T++TL+HG     K+ + V LL++M
Sbjct: 856 TLIDGYCKGGRTTEALELKDKMREEGICPSSITYSTLIHGLYMEGKSEQSVGLLNEM 912



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 129/561 (22%), Positives = 238/561 (42%), Gaps = 113/561 (20%)

Query: 128 CVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGL 187
           C   R+ +A  +   M+  G++ + +   +LING+C+ G+++ A  +   M   +     
Sbjct: 372 CTAGRVDDALRIRDAMLKVGLKMNTVICNSLINGYCKLGHVNKAAEVLVSMKDWNL---- 427

Query: 188 ISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEV 247
             K + + Y+ ++D  CK+    KA +L  EM  +G+N  VV   TL+      G+ E  
Sbjct: 428 --KPDSYGYNTLLDGFCKQEDFIKAFKLCDEMHNKGVNFTVVTYNTLLKNLFHVGHVEHA 485

Query: 248 NGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDG 307
             ++  M   G  PN +T+  ++D   K G  + A  + +  + +G       YN+++ G
Sbjct: 486 LHIWNLMHKRGVAPNEVTYCTLLDAFFKVGTFDRAMMIWKDALSKGFTKSITLYNTMICG 545

Query: 308 YCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQT 367
           +C + ++  A+EIFL M   G     ++Y  LI+GYCK+ N+ EA+ L      +G+  +
Sbjct: 546 FCKMEKLVQAQEIFLKMKELGFPPDEITYRTLIDGYCKVGNLVEALKLKDMSERDGISSS 605

Query: 368 VITYNTLLSGLFQAGQAGYAQKLFDEM--------------------------KLYN--- 398
              YN+L++G+F++ +      L  EM                          K YN   
Sbjct: 606 TEMYNSLITGVFRSEELQKLNGLLAEMKNRELSPNVVTYGSLIAGWCDKGMMDKAYNAYF 665

Query: 399 ------VEPDLSTYNILIDGLCKNNCVQEAVKLFHM-----------------------L 429
                 + P++   + ++  L ++  + EA  + H                        L
Sbjct: 666 KMIDKGIAPNIIIGSKIVSSLYRHGKIDEANLILHQIADIDPIAAHAHSVELPKSDLRHL 725

Query: 430 EMNKF--EFGIE----------IFNCLIDGLCKA-------------------------- 451
           E  K    FG +          ++N  I GLCK+                          
Sbjct: 726 ETQKIVDSFGKKAMSIPISNNIVYNIAITGLCKSKNIDDVRRILSDLLLKGFCPDNYTYC 785

Query: 452 ---------GRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKN 502
                    G+++ A+ L   +   GLVP +V Y+ +I+GLC+ G L++A      + + 
Sbjct: 786 SLIHACSAVGKVNEAFCLRDDMINAGLVPNIVVYNALINGLCKSGNLDRARRLFNKLARK 845

Query: 503 GCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYH 562
           G +P VVT+NTL+ G+ +  +T++ +EL  KM   E  + P   T+S ++  L  + K  
Sbjct: 846 GLSPTVVTYNTLIDGYCKGGRTTEALELKDKMR--EEGICPSSITYSTLIHGLYMEGKSE 903

Query: 563 ECSAVSKSSYRACLYVTIFQP 583
           +   +     +A    ++  P
Sbjct: 904 QSVGLLNEMMKAGKGSSVMDP 924



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 43/206 (20%), Positives = 103/206 (50%), Gaps = 20/206 (9%)

Query: 340 INGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEM----K 395
           ++ YCKI+++     +Y+++        V+  N  +           A  ++DE+    +
Sbjct: 132 VSSYCKIVHILSRARMYKEVRVYLNELVVLCKNNYI-----------ASAVWDELVSVYR 180

Query: 396 LYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLD 455
            ++  P  + +++++    +    + A+ +F  +        +   N L+  L + G   
Sbjct: 181 EFSFSP--TVFDMILKVFAEKGMTKFALCVFDNMGKCGRVPSLRSCNSLLSNLVQNGEAF 238

Query: 456 NAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLM 515
            A  ++ ++   G++P + +Y+IM++  C++G++++A +F+  ME++ C PNVVT+N+L+
Sbjct: 239 KALLVYEQMIALGILPDIFSYTIMVNAYCKEGRVDEAFNFVKEMERSCCEPNVVTYNSLI 298

Query: 516 HGFLQNNK---TSKVVELLHKMAEPE 538
            G++         KV+ L+ +   PE
Sbjct: 299 DGYVSLGDVCGAKKVLALMSEKGIPE 324


>gi|359493281|ref|XP_002272603.2| PREDICTED: pentatricopeptide repeat-containing protein At5g55840-like
            [Vitis vinifera]
          Length = 2037

 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 164/587 (27%), Positives = 248/587 (42%), Gaps = 121/587 (20%)

Query: 73   PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
            P + + N++  ++ K++  + V S +R++   G+ P+  T NILIN       GLCVE  
Sbjct: 947  PSVYTCNMILASMVKDKRTELVWSLFREMSDKGICPNVGTFNILIN-------GLCVEGN 999

Query: 133  IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
            +K+A  L K M   G  P ++TY TL+N +C+ G    A+ L   M+    E       +
Sbjct: 1000 LKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMICKGIE------AD 1053

Query: 193  IFSYSIIIDSLC-----------------------------------KEGLVDKAKELFL 217
            + +Y++ ID+LC                                   KEG +  A ++F 
Sbjct: 1054 VCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQVFN 1113

Query: 218  EMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTF----------- 266
            EM    ++P  V    LI G C  G++EE   L   M   G R N +T+           
Sbjct: 1114 EMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLLNGLCKHE 1173

Query: 267  ------------------------NVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYN 302
                                     V+ID LCK G ++EA  L+  M + G+NPD  TY+
Sbjct: 1174 KFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYS 1233

Query: 303  SLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISN 362
            SL++G+C VG I +A+EI   M+  G     + Y+ LI  +C+  NV EAM +Y  +  N
Sbjct: 1234 SLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCN 1293

Query: 363  GVRQTVITYNTLLSGLFQAGQAGYAQKL-------------------------------- 390
            G      T N L+S L + G+ G A+K                                 
Sbjct: 1294 GHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNA 1353

Query: 391  ---FDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDG 447
               FD+M      P   TY  L+ GLCK   + EA K  + L          ++N L+  
Sbjct: 1354 FSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAE 1413

Query: 448  LCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKAND-FLLYMEKNGCAP 506
             CK+G L  A  LF K+ Q  ++P   TYS ++ GLCRKGK   A   F   M +    P
Sbjct: 1414 TCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFP 1473

Query: 507  NVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
            N V +  L+ G  +            +M   ++   PD   F+ ++D
Sbjct: 1474 NHVMYTCLVDGLSKAGHPKAAFYFFEEMM--KKGTCPDTVAFNAIID 1518



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 135/498 (27%), Positives = 242/498 (48%), Gaps = 25/498 (5%)

Query: 65   YMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIG---------LLPDFLTLNI 115
            ++THM        + L    + K R YD+  S  R L  +G         L+  +   N 
Sbjct: 861  HLTHM--------YCLTAHILVKARMYDSAKSILRHLCQMGIGSKSIFGALMDTYPLCNS 912

Query: 116  LINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLH 175
            + + F    R    E  I  A   F+ +   G +P V T   ++    +     +   L 
Sbjct: 913  IPSVFDLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLF 972

Query: 176  KKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLI 235
            ++M     + G+    N+ +++I+I+ LC EG + KA  L  +M+  G  P +V   TL+
Sbjct: 973  REMS----DKGICP--NVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLL 1026

Query: 236  HGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLN 295
            + +C  G ++    L   M+  G   ++ T+NV ID LC   +  +A  LL+ M +  ++
Sbjct: 1027 NWYCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMIS 1086

Query: 296  PDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSL 355
            P+  TYN+L++G+   G+I  A ++F  M         V+YN LI G+C + + EEA+ L
Sbjct: 1087 PNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRL 1146

Query: 356  YRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCK 415
               + + G+R   +TY TLL+GL +  +   A++L + M++ ++      Y +LIDGLCK
Sbjct: 1147 LDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCK 1206

Query: 416  NNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVT 475
            N  + EAV+L   +  +     +  ++ LI+G C+ G + +A E+  ++ + GLV   + 
Sbjct: 1207 NGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKII 1266

Query: 476  YSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMA 535
            YS +I+  C+ G + +A      M  NG   +  T N L+    ++ K  +  + L  M+
Sbjct: 1267 YSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMS 1326

Query: 536  EPERNLVPDDTTFSIVVD 553
                 LVP+  T+  +++
Sbjct: 1327 RI--GLVPNSITYDCIIN 1342



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 122/403 (30%), Positives = 200/403 (49%), Gaps = 37/403 (9%)

Query: 196  YSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEML 255
            + ++I    KEG++D A E F  +   G  P+V  C  ++         E V  LF EM 
Sbjct: 917  FDLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFREMS 976

Query: 256  DLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRID 315
            D G  PN+ TFN++I+ LC  G + +A  LL+ M + G  P   TYN+L++ YC  GR  
Sbjct: 977  DKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYK 1036

Query: 316  TAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLL 375
             A E+   M  KG +  V +YN+ I+  C      +A  L +++    +    +TYNTL+
Sbjct: 1037 AAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLI 1096

Query: 376  SGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLF-HM----LE 430
            +G  + G+ G A ++F+EM  +++ P+  TYN LI G C     +EA++L  HM    L 
Sbjct: 1097 NGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLR 1156

Query: 431  MNKFEFGIEI------------------------------FNCLIDGLCKAGRLDNAWEL 460
            +N+  +G  +                              +  LIDGLCK G LD A +L
Sbjct: 1157 LNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQL 1216

Query: 461  FHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQ 520
               + + G+ P V+TYS +I+G CR G ++ A + +  M ++G   N + ++TL++ F Q
Sbjct: 1217 VGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQ 1276

Query: 521  NNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
            +   ++ +++   M         D  T +++V  L +D K  E
Sbjct: 1277 HGNVTEAMKVYAVMNCNGHG--ADHFTCNVLVSSLCRDGKLGE 1317



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 137/543 (25%), Positives = 231/543 (42%), Gaps = 51/543 (9%)

Query: 49   CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
            C+ G   L EA  F  +M+ +   P   +++ +              SF+  ++  G  P
Sbjct: 1310 CRDG--KLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHP 1367

Query: 109  DFLTLNILINCFGNKERGLC-----VENR------------------------------I 133
             F T       +G+  +GLC     VE +                              +
Sbjct: 1368 SFFT-------YGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNL 1420

Query: 134  KEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNI 193
             EA  LF  M+   V PD  TY +L+ G CR G    A+ L    +      G +   ++
Sbjct: 1421 HEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMG----RGTLFPNHV 1476

Query: 194  FSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIE 253
              Y+ ++D L K G    A   F EM  +G  P  V    +I      G   + N  F  
Sbjct: 1477 M-YTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFST 1535

Query: 254  MLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGR 313
            M   G  PNL T+N+++    K   +     L   M++ G+ PD+ T++SL+ G    G 
Sbjct: 1536 MRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGI 1595

Query: 314  IDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNT 373
             D   ++   M  +G      ++NILIN Y +   + +A  L   + + GV     TYN 
Sbjct: 1596 PDLGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNH 1655

Query: 374  LLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNK 433
            + +GL +      +  +  EM    V P  + Y  LI+G+C+   +Q A KL   +E   
Sbjct: 1656 IFNGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALG 1715

Query: 434  FEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKAN 493
            F       + ++ GL   G+ ++A  +   + +  L+PT+ T++ ++H  CR  K+ +A 
Sbjct: 1716 FGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEAL 1775

Query: 494  DFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
                 ME  G   +VV +N L+ G   N  ++   EL  +M    R+L P+ TT++++VD
Sbjct: 1776 KLKGVMELCGLKLDVVAYNVLIMGMCANGDSAAAFELYEEMR--HRDLCPNITTYAVLVD 1833

Query: 554  LLA 556
             ++
Sbjct: 1834 AIS 1836



 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 120/491 (24%), Positives = 219/491 (44%), Gaps = 51/491 (10%)

Query: 49   CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
            CK G  NL EA+ F   + ++  +     +N L     K+ +    ++ + K+V   +LP
Sbjct: 1380 CKGG--NLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLP 1437

Query: 109  DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFG-VRPDVITYGTLINGFCRTGN 167
            D  T + L+        GLC + +   A  LF   +  G + P+ + Y  L++G  + G+
Sbjct: 1438 DSYTYSSLLT-------GLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGH 1490

Query: 168  LSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPA 227
               A    ++M+    + G    T   +++ IIDS  + G + KA + F  M+  G+ P 
Sbjct: 1491 PKAAFYFFEEMM----KKGTCPDT--VAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPN 1544

Query: 228  VVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLE 287
            +     L+HGF           L+  M+  G  P+ LTF+ +I  L K G  +    LL 
Sbjct: 1545 LATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLG 1604

Query: 288  LMIQRGLNPDRFTYNSLMDGYCLVGRI-------------------DTAREIFLSMHSKG 328
             MI  G   D+FT+N L++ Y   G++                   DT   IF  ++ K 
Sbjct: 1605 KMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKS 1664

Query: 329  C--KHTVV--------------SYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYN 372
               + TVV               Y  LING C++ +++ A  L  ++ + G     +  +
Sbjct: 1665 AFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAES 1724

Query: 373  TLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMN 432
             ++ GL   G+   A  + D M    + P ++T+  L+   C++  + EA+KL  ++E+ 
Sbjct: 1725 AMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVMELC 1784

Query: 433  KFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKA 492
              +  +  +N LI G+C  G    A+EL+ ++  + L P + TY++++  +     L + 
Sbjct: 1785 GLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLVDAISAANNLIQG 1844

Query: 493  NDFLLYMEKNG 503
               L  +++ G
Sbjct: 1845 EKLLTDLQERG 1855


>gi|255581046|ref|XP_002531339.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223529061|gb|EEF31046.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 630

 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 141/469 (30%), Positives = 223/469 (47%), Gaps = 36/469 (7%)

Query: 78  FNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEAT 137
           +N L   +        V + +  +VS G+ PD  T NILI       + LC  ++I+ A 
Sbjct: 161 YNFLLNVLVDGNKLKLVENVHSTMVSKGIKPDVSTFNILI-------KALCKAHQIRPAI 213

Query: 138 WLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYS 197
            + + M ++G+ PD  T+ TL+ GF   GN+  A R+ ++M+               + +
Sbjct: 214 LVMEEMSSYGLVPDEKTFTTLMQGFIEEGNMDGAFRVKEQMLDAG------CPVTNVTVN 267

Query: 198 IIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDL 257
           +++   CKEG +++A     EM   G +   +                    L+ EM + 
Sbjct: 268 VLVHGFCKEGRIEEALSFIDEMSNEGKHTMAI-------------------ELYNEMKNK 308

Query: 258 GPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTA 317
           G +P+  T+N++ID LC  GK+ EA GLL  M   G   +  TYN+L+DG+C   +I+ A
Sbjct: 309 GCQPDEFTYNMLIDSLCYRGKLQEALGLLREMEISGCARNVITYNTLIDGFCKNKKIEEA 368

Query: 318 REIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSG 377
            EIF  M  +G     V+YN LI+G CK   V+EA  L  Q+I  G++    TYN++L+ 
Sbjct: 369 EEIFDQMEIQGLSRNSVTYNTLIDGLCKSRRVQEAAQLMDQMIMEGLKPDKFTYNSMLTY 428

Query: 378 LFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFG 437
             + G    A  +   M     EPD+ TY  LI GLCK   V+ A +L   +++      
Sbjct: 429 FCREGDIQKAADIVQTMTSNGCEPDIVTYGTLIGGLCKAGRVEVASRLLRSIQLKGMVLT 488

Query: 438 IEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRK-GKLEKANDFL 496
              +N +I  L K  R   A  LF ++ +KG  P   TY I+  GL    G + +A DF+
Sbjct: 489 PHAYNPVIQALFKRKRTKEAMRLFREMEEKGNTPDAFTYKIVFRGLSNSGGPIGEAVDFV 548

Query: 497 LYMEKNGCAPNVVTFNTLMHGFLQ---NNKTSKVVELLHKMAEPERNLV 542
           + M + G  P   +F  L  G       +   K+V+L+ + A   +N V
Sbjct: 549 IEMIEKGFLPEFSSFYMLAEGLCSLSMEDTLIKLVDLVMEKANFSQNEV 597



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 137/433 (31%), Positives = 205/433 (47%), Gaps = 24/433 (5%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
           P +S+FN+L  A+ K       I    ++ S GL+PD  T   L+       +G   E  
Sbjct: 191 PDVSTFNILIKALCKAHQIRPAILVMEEMSSYGLVPDEKTFTTLM-------QGFIEEGN 243

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLIS--- 189
           +  A  + + M+  G     +T   L++GFC+ G +  AL    +M +       I    
Sbjct: 244 MDGAFRVKEQMLDAGCPVTNVTVNVLVHGFCKEGRIEEALSFIDEMSNEGKHTMAIELYN 303

Query: 190 -------KTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAG 242
                  + + F+Y+++IDSLC  G + +A  L  EM+  G    V+   TLI GFC   
Sbjct: 304 EMKNKGCQPDEFTYNMLIDSLCYRGKLQEALGLLREMEISGCARNVITYNTLIDGFCKNK 363

Query: 243 NWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYN 302
             EE   +F +M   G   N +T+N +ID LCK  ++ EA  L++ MI  GL PD+FTYN
Sbjct: 364 KIEEAEEIFDQMEIQGLSRNSVTYNTLIDGLCKSRRVQEAAQLMDQMIMEGLKPDKFTYN 423

Query: 303 SLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISN 362
           S++  +C  G I  A +I  +M S GC+  +V+Y  LI G CK   VE A  L R I   
Sbjct: 424 SMLTYFCREGDIQKAADIVQTMTSNGCEPDIVTYGTLIGGLCKAGRVEVASRLLRSIQLK 483

Query: 363 GVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNC-VQE 421
           G+  T   YN ++  LF+  +   A +LF EM+     PD  TY I+  GL  +   + E
Sbjct: 484 GMVLTPHAYNPVIQALFKRKRTKEAMRLFREMEEKGNTPDAFTYKIVFRGLSNSGGPIGE 543

Query: 422 AVKLFHMLEMNKFEFGIEI--FNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIM 479
           AV    ++EM +  F  E   F  L +GLC     D   +L   + +K          +M
Sbjct: 544 AVDF--VIEMIEKGFLPEFSSFYMLAEGLCSLSMEDTLIKLVDLVMEKANFSQ--NEVVM 599

Query: 480 IHGLCRKGKLEKA 492
           I G  +  K + A
Sbjct: 600 IRGFLKIRKFQDA 612



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 62/239 (25%), Positives = 108/239 (45%), Gaps = 14/239 (5%)

Query: 56  LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNI 115
           + EA   F  M     S    ++N L   + K+R          +++  GL PD  T N 
Sbjct: 365 IEEAEEIFDQMEIQGLSRNSVTYNTLIDGLCKSRRVQEAAQLMDQMIMEGLKPDKFTYNS 424

Query: 116 LINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLH 175
           ++  F       C E  I++A  + + M + G  PD++TYGTLI G C+ G + VA RL 
Sbjct: 425 MLTYF-------CREGDIQKAADIVQTMTSNGCEPDIVTYGTLIGGLCKAGRVEVASRLL 477

Query: 176 KKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLI 235
           + +       G++   +  +Y+ +I +L K     +A  LF EM+ +G  P       + 
Sbjct: 478 RSIQL----KGMVLTPH--AYNPVIQALFKRKRTKEAMRLFREMEEKGNTPDAFTYKIVF 531

Query: 236 HGFCCAGN-WEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRG 293
            G   +G    E     IEM++ G  P   +F ++ + LC     +    L++L++++ 
Sbjct: 532 RGLSNSGGPIGEAVDFVIEMIEKGFLPEFSSFYMLAEGLCSLSMEDTLIKLVDLVMEKA 590


>gi|334182978|ref|NP_001185123.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
 gi|332193283|gb|AEE31404.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
          Length = 811

 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 137/495 (27%), Positives = 253/495 (51%), Gaps = 23/495 (4%)

Query: 69  MQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLC 128
           ++PS  +S+   +  A+         + F+R ++  G     ++ N ++       +GL 
Sbjct: 212 IEPSG-VSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVL-------KGLS 263

Query: 129 VENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLI 188
           V+ +I+ A+ L   ++  G  P+V+T+ TLINGFC+ G +  A  L K M     E  LI
Sbjct: 264 VD-QIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLI 322

Query: 189 SKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVN 248
                 +YS +ID   K G++    +LF +   +G+   VVV ++ I  +  +G+    +
Sbjct: 323 ------AYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATAS 376

Query: 249 GLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGY 308
            ++  ML  G  PN++T+ ++I  LC+ G+I EA G+   +++RG+ P   TY+SL+DG+
Sbjct: 377 VVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGF 436

Query: 309 CLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTV 368
           C  G + +   ++  M   G    VV Y +L++G  K   +  AM    +++   +R  V
Sbjct: 437 CKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNV 496

Query: 369 ITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTY------NILIDGLCKNNCVQEA 422
           + +N+L+ G  +  +   A K+F  M +Y ++PD++T+      +I+ D  CK+      
Sbjct: 497 VVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIG 556

Query: 423 VKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHG 482
           ++LF +++ NK    I + N +I  L K  R+++A + F+ L +  + P +VTY+ MI G
Sbjct: 557 LQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICG 616

Query: 483 LCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLV 542
            C   +L++A      ++     PN VT   L+H   +NN     + +   MA  E+   
Sbjct: 617 YCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMA--EKGSK 674

Query: 543 PDDTTFSIVVDLLAK 557
           P+  T+  ++D  +K
Sbjct: 675 PNAVTYGCLMDWFSK 689



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 141/478 (29%), Positives = 230/478 (48%), Gaps = 21/478 (4%)

Query: 105 GLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCR 164
           G  P+ +T   LIN       G C    +  A  LFK M   G+ PD+I Y TLI+G+ +
Sbjct: 281 GPAPNVVTFCTLIN-------GFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFK 333

Query: 165 TGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGI 224
            G L +      K+ S     G+  K ++  +S  ID   K G +  A  ++  M  +GI
Sbjct: 334 AGMLGMG----HKLFSQALHKGV--KLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGI 387

Query: 225 NPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANG 284
           +P VV  T LI G C  G   E  G++ ++L  G  P+++T++ +ID  CK G +     
Sbjct: 388 SPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFA 447

Query: 285 LLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYC 344
           L E MI+ G  PD   Y  L+DG    G +  A    + M  +  +  VV +N LI+G+C
Sbjct: 448 LYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWC 507

Query: 345 KILNVEEAMSLYRQIISNGVRQTVITYNTLL------SGLFQAGQAGYAQKLFDEMKLYN 398
           ++   +EA+ ++R +   G++  V T+ T++          +  +     +LFD M+   
Sbjct: 508 RLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNK 567

Query: 399 VEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAW 458
           +  D++  N++I  L K + +++A K F+ L   K E  I  +N +I G C   RLD A 
Sbjct: 568 ISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAE 627

Query: 459 ELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGF 518
            +F  L      P  VT +I+IH LC+   ++ A      M + G  PN VT+  LM  F
Sbjct: 628 RIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWF 687

Query: 519 LQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKSSYRACL 576
            ++       +L  +M E  + + P   ++SI++D L K  +  E + +   +  A L
Sbjct: 688 SKSVDIEGSFKLFEEMQE--KGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKL 743



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 128/517 (24%), Positives = 253/517 (48%), Gaps = 58/517 (11%)

Query: 71  PSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVE 130
           P+P + +F  L     K    D     ++ +   G+ PD +  + LI+       G    
Sbjct: 282 PAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLID-------GYFKA 334

Query: 131 NRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISK 190
             +     LF   +  GV+ DV+ + + I+ + ++G+L+ A  ++K+M+      G+   
Sbjct: 335 GMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLC----QGI--S 388

Query: 191 TNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGL 250
            N+ +Y+I+I  LC++G + +A  ++ ++  RG+ P++V  ++LI GFC  GN      L
Sbjct: 389 PNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFAL 448

Query: 251 FIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCL 310
           + +M+ +G  P+++ + V++D L K G +  A      M+ + +  +   +NSL+DG+C 
Sbjct: 449 YEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCR 508

Query: 311 VGRIDTAREIFLSMHSKGCK------HTVVSYNILINGYCKILN---------------- 348
           + R D A ++F  M   G K       TV+  +I+ + +CK +                 
Sbjct: 509 LNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKI 568

Query: 349 -------------------VEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQK 389
                              +E+A   +  +I   +   ++TYNT++ G     +   A++
Sbjct: 569 SADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAER 628

Query: 390 LFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLC 449
           +F+ +K+    P+  T  ILI  LCKNN +  A+++F ++     +     + CL+D   
Sbjct: 629 IFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFS 688

Query: 450 KAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVV 509
           K+  ++ +++LF ++ +KG+ P++V+YSI+I GLC++G++++A +           P+VV
Sbjct: 689 KSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVV 748

Query: 510 TFNTLMHGFLQNNKTSKVVELLHKMAEPERNLV-PDD 545
            +  L+ G+ +  +  +   L   M    RN V PDD
Sbjct: 749 AYAILIRGYCKVGRLVEAALLYEHML---RNGVKPDD 782



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 109/387 (28%), Positives = 194/387 (50%), Gaps = 11/387 (2%)

Query: 186 GLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWE 245
           G I  + + ++  ++D+L  +G V KA +    +  RG    +V C  ++ G       E
Sbjct: 210 GGIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGLS-VDQIE 268

Query: 246 EVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLM 305
             + L   +LD GP PN++TF  +I+  CK G+++ A  L ++M QRG+ PD   Y++L+
Sbjct: 269 VASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLI 328

Query: 306 DGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVR 365
           DGY   G +    ++F     KG K  VV ++  I+ Y K  ++  A  +Y++++  G+ 
Sbjct: 329 DGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGIS 388

Query: 366 QTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKL 425
             V+TY  L+ GL Q G+   A  ++ ++    +EP + TY+ LIDG CK   ++    L
Sbjct: 389 PNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFAL 448

Query: 426 FHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCR 485
           +  +    +   + I+  L+DGL K G + +A     K+  + +   VV ++ +I G CR
Sbjct: 449 YEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCR 508

Query: 486 KGKLEKANDFLLYMEKNGCAPNVVTFNTLMH------GFLQNNKTSKVVELLHKMAEPER 539
             + ++A      M   G  P+V TF T+M        F ++ K +  ++L   M   +R
Sbjct: 509 LNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLM---QR 565

Query: 540 NLVPDDTTF-SIVVDLLAKDEKYHECS 565
           N +  D    ++V+ LL K  +  + S
Sbjct: 566 NKISADIAVCNVVIHLLFKCHRIEDAS 592



 Score =  141 bits (356), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 106/441 (24%), Positives = 208/441 (47%), Gaps = 45/441 (10%)

Query: 154 TYGTLINGFCRTGNLSVALRLHKKMVSGDYEN----GLISKTNIFSY--SIIIDSLCKEG 207
           ++ T+ +   R G   VA ++  +M++   ++    G I   ++ +     +++  C+ G
Sbjct: 101 SFYTIAHVLIRNGMFDVADKVFDEMITNRGKDFNVLGSIRDRSLDADVCKFLMECCCRYG 160

Query: 208 LVDKAKELFLEMKGRGI----NPAVVVCTTLI---------------------------H 236
           +VDKA E+F+     G+    +    +  +LI                           H
Sbjct: 161 MVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIGSDRVDLIADHFDKLCRGGIEPSGVSAH 220

Query: 237 GFC-----CAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQ 291
           GF      C G   +       +++ G R  +++ N ++  L    +I  A+ LL L++ 
Sbjct: 221 GFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGLSV-DQIEVASRLLSLVLD 279

Query: 292 RGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEE 351
            G  P+  T+ +L++G+C  G +D A ++F  M  +G +  +++Y+ LI+GY K   +  
Sbjct: 280 CGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGM 339

Query: 352 AMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILID 411
              L+ Q +  GV+  V+ +++ +    ++G    A  ++  M    + P++ TY ILI 
Sbjct: 340 GHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIK 399

Query: 412 GLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVP 471
           GLC++  + EA  ++  +     E  I  ++ LIDG CK G L + + L+  + + G  P
Sbjct: 400 GLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPP 459

Query: 472 TVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELL 531
            VV Y +++ GL ++G +  A  F + M       NVV FN+L+ G+ + N+  + +++ 
Sbjct: 460 DVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVF 519

Query: 532 HKMAEPERNLVPDDTTFSIVV 552
             M      + PD  TF+ V+
Sbjct: 520 RLMG--IYGIKPDVATFTTVM 538



 Score =  138 bits (348), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 93/383 (24%), Positives = 179/383 (46%), Gaps = 10/383 (2%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           C+ G   + EA   +G +      P I +++ L     K  +  +  + Y  ++ +G  P
Sbjct: 402 CQDG--RIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPP 459

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           D +   +L++       GL  +  +  A      M+   +R +V+ + +LI+G+CR    
Sbjct: 460 DVVIYGVLVD-------GLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRF 512

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
             AL++ + M     +  + + T +   SI+ D+ CK        +LF  M+   I+  +
Sbjct: 513 DEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADI 572

Query: 229 VVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLEL 288
            VC  +IH        E+ +  F  +++    P+++T+N MI   C   +++EA  + EL
Sbjct: 573 AVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFEL 632

Query: 289 MIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILN 348
           +      P+  T   L+   C    +D A  +F  M  KG K   V+Y  L++ + K ++
Sbjct: 633 LKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVD 692

Query: 349 VEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNI 408
           +E +  L+ ++   G+  ++++Y+ ++ GL + G+   A  +F +     + PD+  Y I
Sbjct: 693 IEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAI 752

Query: 409 LIDGLCKNNCVQEAVKLF-HMLE 430
           LI G CK   + EA  L+ HML 
Sbjct: 753 LIRGYCKVGRLVEAALLYEHMLR 775



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 65/243 (26%), Positives = 118/243 (48%), Gaps = 13/243 (5%)

Query: 62  FFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFG 121
            F  M   + S  I+  N++   + K    +    F+  L+   + PD +T N +I C  
Sbjct: 559 LFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMI-C-- 615

Query: 122 NKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSG 181
               G C   R+ EA  +F+ +      P+ +T   LI+  C+  ++  A+R+   M   
Sbjct: 616 ----GYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMA-- 669

Query: 182 DYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCA 241
             E G  SK N  +Y  ++D   K   ++ + +LF EM+ +GI+P++V  + +I G C  
Sbjct: 670 --EKG--SKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKR 725

Query: 242 GNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTY 301
           G  +E   +F + +D    P+++ + ++I   CK G++ EA  L E M++ G+ PD    
Sbjct: 726 GRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDLLQ 785

Query: 302 NSL 304
            +L
Sbjct: 786 RAL 788


>gi|125548803|gb|EAY94625.1| hypothetical protein OsI_16402 [Oryza sativa Indica Group]
          Length = 769

 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 147/503 (29%), Positives = 231/503 (45%), Gaps = 45/503 (8%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPS------PPISSFNLLFGAVAKNRHYDAVISFYRKLV 102
           C   I  L EA YF   M+ +         P + ++  L     K +           ++
Sbjct: 279 CTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMM 338

Query: 103 SIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGF 162
           + G  P+    N L++ +       C E     A  L   M   G  P  + Y   I   
Sbjct: 339 TEGCNPNPSLFNSLVHSY-------CNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSI 391

Query: 163 CRTGNL------SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELF 216
           C    L       +A +++ +M++    N +++K N+ +++     LC  G  DKA +L 
Sbjct: 392 CGQEKLPSPDLLDLAEKIYGEMLAA---NCVLNKVNVANFA---RCLCGVGKFDKAFQLI 445

Query: 217 LEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKG 276
            EM  +G  P     + +I   C A   E+   LF EM  +G  P++ T+ ++ID  CK 
Sbjct: 446 KEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKA 505

Query: 277 GKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSY 336
           G I +A  L E M   G +P   TY +L+  Y    ++  A +IF  M   GC+   V+Y
Sbjct: 506 GLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTY 565

Query: 337 NILINGYCKILNVEEAMSLYRQIISNG----------------VRQTVITYNTLLSGLFQ 380
             L++G CK  N+ +A  +Y ++I                   +   V+TY  L+ GL +
Sbjct: 566 GALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCK 625

Query: 381 AGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEF--GI 438
           A +  +A +L D M     EP+   Y+ LIDG CK   +  A ++F  L+M K  +   +
Sbjct: 626 AHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVF--LQMTKCGYLPSV 683

Query: 439 EIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLY 498
             +  LID + K GRLD A ++  ++ +    P VVTY+ MI GLCR G+ EKA   L  
Sbjct: 684 HTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSL 743

Query: 499 MEKNGCAPNVVTFNTLMHGFLQN 521
           ME+ GC+PNVVT+  L+ G  Q+
Sbjct: 744 MEEKGCSPNVVTYTALIDGLGQS 766



 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 134/491 (27%), Positives = 244/491 (49%), Gaps = 39/491 (7%)

Query: 90  HYDAVISFYRKLVSIGLLPDFLTLNILINCF-GNKERGLCVENRIKEATWLFKNMIAFGV 148
           ++D  +SF  ++     +P+ +T   L++ F   K+ G C          +   M+  G 
Sbjct: 291 YFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKR--------IINMMMTEGC 342

Query: 149 RPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKE-- 206
            P+   + +L++ +C   + + A +L  +M +     G +       Y+I I S+C +  
Sbjct: 343 NPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVV------YNIFIGSICGQEK 396

Query: 207 ----GLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPN 262
                L+D A++++ EM         V         C  G +++   L  EM+  G  P+
Sbjct: 397 LPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPD 456

Query: 263 LLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFL 322
             T++ +I  LC   K+ +A  L + M   G+ PD +TY  L+D +C  G I+ A+ +F 
Sbjct: 457 TSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFE 516

Query: 323 SMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAG 382
            M S GC  TVV+Y  LI+ Y K   V +A  ++ +++  G R   +TY  L+ GL +AG
Sbjct: 517 EMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAG 576

Query: 383 QAGYAQKLFDEM----------------KLYNVEPDLSTYNILIDGLCKNNCVQEAVKLF 426
               A +++ ++                  + + P++ TY  L+DGLCK + V  A +L 
Sbjct: 577 NISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELL 636

Query: 427 HMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRK 486
             +  +  E    +++ LIDG CKAG++D+A E+F ++ + G +P+V TY+ +I  + + 
Sbjct: 637 DAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKD 696

Query: 487 GKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDT 546
           G+L+ A   L  M K+ C PNVVT+  ++ G  +  ++ K ++LL  M   E+   P+  
Sbjct: 697 GRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLM--EEKGCSPNVV 754

Query: 547 TFSIVVDLLAK 557
           T++ ++D L +
Sbjct: 755 TYTALIDGLGQ 765



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 124/470 (26%), Positives = 199/470 (42%), Gaps = 40/470 (8%)

Query: 113 LNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVAL 172
           LN+L+       R  C      EA      +  FG RP  +TY  L+      G + +  
Sbjct: 177 LNVLV-------RRCCRGGMWNEALEELGRLKDFGYRPSKVTYNALVQVLSSAGQVDLGF 229

Query: 173 RLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCT 232
           R+ K+M     E+G     + F+      +LCKEG    A ++   ++        V+CT
Sbjct: 230 RVQKEMS----ESGFC--MDRFTVGCFAHALCKEGRWADALDM---IEREDFKLDTVLCT 280

Query: 233 TLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQR 292
            +I G   A  ++E       M      PN++T+  ++    K  ++     ++ +M+  
Sbjct: 281 HMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTE 340

Query: 293 GLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYC-------- 344
           G NP+   +NSL+  YC       A ++   M + GC    V YNI I   C        
Sbjct: 341 GCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSP 400

Query: 345 KILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLS 404
            +L++ E   +Y ++++       +        L   G+   A +L  EM      PD S
Sbjct: 401 DLLDLAE--KIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTS 458

Query: 405 TYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKL 464
           TY+ +I  LC    V++A  LF  ++M      +  +  LID  CKAG ++ A  LF ++
Sbjct: 459 TYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEM 518

Query: 465 PQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKT 524
              G  PTVVTY+ +IH   +  ++ +AND    M   GC PN VT+  L+ G  +    
Sbjct: 519 RSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNI 578

Query: 525 SKVVELLHKM--------------AEPERNLVPDDTTFSIVVDLLAKDEK 560
           SK  E+  K+               E    L P+  T+  +VD L K  K
Sbjct: 579 SKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHK 628



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 96/352 (27%), Positives = 157/352 (44%), Gaps = 29/352 (8%)

Query: 48  NCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLL 107
            C  G+   ++A      M      P  S+++ +   +      +     ++++  +G+ 
Sbjct: 430 RCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVT 489

Query: 108 PDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGN 167
           PD  T  ILI+ F       C    I++A WLF+ M + G  P V+TY  LI+ + +   
Sbjct: 490 PDVYTYTILIDSF-------CKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQ 542

Query: 168 LSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRG---- 223
           +  A  +  +MV          + N  +Y  ++D LCK G + KA E++ ++ G      
Sbjct: 543 VPQANDIFHRMVDAG------CRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSAD 596

Query: 224 ------------INPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMID 271
                       + P VV    L+ G C A   +  + L   ML  G  PN + ++ +ID
Sbjct: 597 SDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALID 656

Query: 272 CLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKH 331
             CK GKI+ A  +   M + G  P   TY SL+D     GR+D A ++   M    C  
Sbjct: 657 GFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTP 716

Query: 332 TVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQ 383
            VV+Y  +I+G C+I   E+A+ L   +   G    V+TY  L+ GL Q+ Q
Sbjct: 717 NVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGQSWQ 768



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 61/244 (25%), Positives = 101/244 (41%), Gaps = 3/244 (1%)

Query: 291 QRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVE 350
           Q G +     Y++L D     GR   A  +   +  +  +      N+L+   C+     
Sbjct: 132 QVGYSHTGACYDALADALGFDGRARDAERLLREIGEEDREVLGRLLNVLVRRCCRGGMWN 191

Query: 351 EAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILI 410
           EA+    ++   G R + +TYN L+  L  AGQ     ++  EM       D  T     
Sbjct: 192 EALEELGRLKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFA 251

Query: 411 DGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLV 470
             LCK     +A+    M+E   F+    +   +I GL +A   D A    H++     +
Sbjct: 252 HALCKEGRWADALD---MIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCI 308

Query: 471 PTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVEL 530
           P VVTY  ++ G  +K +L      +  M   GC PN   FN+L+H +      +   +L
Sbjct: 309 PNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKL 368

Query: 531 LHKM 534
           L++M
Sbjct: 369 LNRM 372


>gi|357499719|ref|XP_003620148.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|217074978|gb|ACJ85849.1| unknown [Medicago truncatula]
 gi|355495163|gb|AES76366.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 465

 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 123/406 (30%), Positives = 217/406 (53%), Gaps = 7/406 (1%)

Query: 131 NRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISK 190
           N + +A  LF  ++     P  I +  ++    ++ +    L L KKM       G+  K
Sbjct: 66  NDVDDAVSLFNCLLRQNPTPPAIEFNKILGSLVKSKHYHTVLYLSKKMEF----RGI--K 119

Query: 191 TNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGL 250
            N+ + +I+I+  C+ GL+  A  +F ++   G NP  +  TTLI G C  G   +    
Sbjct: 120 PNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYNPNTITFTTLIKGLCLKGQIHQALNF 179

Query: 251 FIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCL 310
             +++ LG + N +++  +ID LCK G+   A  LL  +  + + P+   Y++++DG C 
Sbjct: 180 HDKLVALGFQFNQISYGTLIDGLCKVGETRAALDLLRRVDGKLVQPNVVMYSTIIDGMCK 239

Query: 311 VGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVIT 370
              ++ A +++  M SKG    VV+Y+ LI+G+  +  +++A+ L+ ++IS  ++  V T
Sbjct: 240 DKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGKLKDAVDLFNKMISENIKPDVYT 299

Query: 371 YNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLE 430
           +N L+    ++G+  YA KL DEM      P++ TY+ ++D LCK + V +AV L   L+
Sbjct: 300 FNILVDVFCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKTHRVDKAVALLTKLK 359

Query: 431 MNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLE 490
                  +  +  LIDGLC +G+L++A  +F  L  KG   TVVTY +M +G C+KG  +
Sbjct: 360 DQGIRPNMHTYTILIDGLCTSGKLEDARNIFEDLLVKGYDITVVTYIVMFYGFCKKGLFD 419

Query: 491 KANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAE 536
           +A+  L  ME+NGC P+  T+  +     +  + + + E LH+  E
Sbjct: 420 EASALLSKMEENGCIPDAKTYELIKLSLFKKGE-NDMAEKLHRECE 464



 Score =  208 bits (530), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 121/405 (29%), Positives = 205/405 (50%), Gaps = 34/405 (8%)

Query: 55  NLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLN 114
           ++++A   F  +    P+PP   FN + G++ K++HY  V+   +K+   G+ P+ +  N
Sbjct: 67  DVDDAVSLFNCLLRQNPTPPAIEFNKILGSLVKSKHYHTVLYLSKKMEFRGIKPNLVNCN 126

Query: 115 ILINC----------------------------FGNKERGLCVENRIKEATWLFKNMIAF 146
           ILINC                            F    +GLC++ +I +A      ++A 
Sbjct: 127 ILINCFCQLGLIPFAFSVFAKILKMGYNPNTITFTTLIKGLCLKGQIHQALNFHDKLVAL 186

Query: 147 GVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKE 206
           G + + I+YGTLI+G C+ G    AL L +++      +G + + N+  YS IID +CK+
Sbjct: 187 GFQFNQISYGTLIDGLCKVGETRAALDLLRRV------DGKLVQPNVVMYSTIIDGMCKD 240

Query: 207 GLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTF 266
             V+ A +L+ EM  +GI+P VV  + LI GF   G  ++   LF +M+    +P++ TF
Sbjct: 241 KHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGKLKDAVDLFNKMISENIKPDVYTF 300

Query: 267 NVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHS 326
           N+++D  CK GKI+ A  L++ M  RG  P+  TY+S++D  C   R+D A  +   +  
Sbjct: 301 NILVDVFCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKTHRVDKAVALLTKLKD 360

Query: 327 KGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGY 386
           +G +  + +Y ILI+G C    +E+A +++  ++  G   TV+TY  +  G  + G    
Sbjct: 361 QGIRPNMHTYTILIDGLCTSGKLEDARNIFEDLLVKGYDITVVTYIVMFYGFCKKGLFDE 420

Query: 387 AQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
           A  L  +M+     PD  TY ++   L K      A KL    E+
Sbjct: 421 ASALLSKMEENGCIPDAKTYELIKLSLFKKGENDMAEKLHRECEI 465



 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 117/407 (28%), Positives = 192/407 (47%), Gaps = 38/407 (9%)

Query: 189 SKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVN 248
           SK N+  YS    +      VD A  LF  +  +   P  +    ++     + ++  V 
Sbjct: 48  SKINLIPYSSTSTTFHSNNDVDDAVSLFNCLLRQNPTPPAIEFNKILGSLVKSKHYHTVL 107

Query: 249 GLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGY 308
            L  +M   G +PNL+  N++I+C C+ G I  A  +   +++ G NP+  T+ +L+ G 
Sbjct: 108 YLSKKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYNPNTITFTTLIKGL 167

Query: 309 CLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKI---------------------- 346
           CL G+I  A      + + G +   +SY  LI+G CK+                      
Sbjct: 168 CLKGQIHQALNFHDKLVALGFQFNQISYGTLIDGLCKVGETRAALDLLRRVDGKLVQPNV 227

Query: 347 -------------LNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDE 393
                         +V +A  LY +++S G+   V+TY+ L+SG F  G+   A  LF++
Sbjct: 228 VMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGKLKDAVDLFNK 287

Query: 394 MKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGR 453
           M   N++PD+ T+NIL+D  CK+  +  A+KL   +        I  ++ ++D LCK  R
Sbjct: 288 MISENIKPDVYTFNILVDVFCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKTHR 347

Query: 454 LDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNT 513
           +D A  L  KL  +G+ P + TY+I+I GLC  GKLE A +    +   G    VVT+  
Sbjct: 348 VDKAVALLTKLKDQGIRPNMHTYTILIDGLCTSGKLEDARNIFEDLLVKGYDITVVTYIV 407

Query: 514 LMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIV-VDLLAKDE 559
           + +GF +     +   LL KM   E   +PD  T+ ++ + L  K E
Sbjct: 408 MFYGFCKKGLFDEASALLSKME--ENGCIPDAKTYELIKLSLFKKGE 452


>gi|255571081|ref|XP_002526491.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223534166|gb|EEF35882.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 884

 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 151/530 (28%), Positives = 250/530 (47%), Gaps = 50/530 (9%)

Query: 66  MTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKER 125
           M  +   P  S+ ++LF  + +   Y +V    R ++  G  P     NI+I CF     
Sbjct: 234 MREVGVRPSSSAISILFRLLLRVGDYGSVWKLLRGMIRDGPRPCNHNFNIMILCF----- 288

Query: 126 GLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYEN 185
             C +  ++ A  L   M  F   PDV  Y  LIN +   G  S AL     M+    +N
Sbjct: 289 --CQKGYLRVAESLLFVMPKFCCEPDVYAYNILINAYRIRGRTSDALGFLHLMI----KN 342

Query: 186 GLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWE 245
           G   K ++ ++S II + C EG V +A+++F  ++  G++P V +  TL+ G+  A +  
Sbjct: 343 G--CKPSLITFSTIITAFCNEGNVVEARKIFEGIQEVGLSPNVAMYNTLMSGYFKARDVC 400

Query: 246 EVNGLFIEMLDLGPRPNLLTFNVMI--------------------------DC------- 272
           + N L+ EM D G  P+  TFN+++                          DC       
Sbjct: 401 QANMLYEEMRDKGIAPDGATFNILVAGNYKYGKEADSYELFRDWSLSSLVPDCSLYDVSV 460

Query: 273 --LCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCK 330
             LC  G+++EA   LE M+++G+ P    +NS++  Y   G  D A + +  M   G  
Sbjct: 461 AGLCWAGQLDEAMQFLEDMLEKGMPPSVVAFNSVIAAYSRAGFEDNAHKAYKIMLMFGLV 520

Query: 331 HTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKL 390
            +  + + ++ G  K   ++EA  L  ++I  G+    + +  LL G F+ G    A  L
Sbjct: 521 PSSSTCSSMLLGLSKKGRLQEARDLLYKMIDKGLPVNKVAFTVLLDGYFKVGDTAGAHSL 580

Query: 391 FDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCK 450
           + EM+   + PD   ++  IDGL K   V+EA + F  +    F     ++N LI GLC 
Sbjct: 581 WYEMEARGICPDAIAFSAFIDGLSKAGLVEEAYEAFSEMSKKGFVPNNFVYNSLIHGLCN 640

Query: 451 AGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVT 510
            G+L  A +L  ++ QKGL+P + T +I+I+G C++G+++ A D    M   G  P+ VT
Sbjct: 641 CGKLHEALKLEREMRQKGLLPDIFTTNIIINGFCKEGRMKSAFDAFAEMHHIGVTPDTVT 700

Query: 511 FNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEK 560
           +NTL+ G+ +        E L+KM     +  PD TT++I +      +K
Sbjct: 701 YNTLIGGYCKVLDMVSADEFLNKMYASGWD--PDITTYNIRIQGFCSSQK 748



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 132/480 (27%), Positives = 221/480 (46%), Gaps = 16/480 (3%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           C  G  N+ EAR  F  +  +  SP ++ +N L     K R        Y ++   G+ P
Sbjct: 359 CNEG--NVVEARKIFEGIQEVGLSPNVAMYNTLMSGYFKARDVCQANMLYEEMRDKGIAP 416

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           D  T NIL+   GN + G     +  ++  LF++     + PD   Y   + G C  G L
Sbjct: 417 DGATFNILVA--GNYKYG-----KEADSYELFRDWSLSSLVPDCSLYDVSVAGLCWAGQL 469

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
             A++  + M+    E G+    ++ +++ +I +  + G  D A + +  M   G+ P+ 
Sbjct: 470 DEAMQFLEDML----EKGM--PPSVVAFNSVIAAYSRAGFEDNAHKAYKIMLMFGLVPSS 523

Query: 229 VVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLEL 288
             C++++ G    G  +E   L  +M+D G   N + F V++D   K G    A+ L   
Sbjct: 524 STCSSMLLGLSKKGRLQEARDLLYKMIDKGLPVNKVAFTVLLDGYFKVGDTAGAHSLWYE 583

Query: 289 MIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILN 348
           M  RG+ PD   +++ +DG    G ++ A E F  M  KG       YN LI+G C    
Sbjct: 584 MEARGICPDAIAFSAFIDGLSKAGLVEEAYEAFSEMSKKGFVPNNFVYNSLIHGLCNCGK 643

Query: 349 VEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNI 408
           + EA+ L R++   G+   + T N +++G  + G+   A   F EM    V PD  TYN 
Sbjct: 644 LHEALKLEREMRQKGLLPDIFTTNIIINGFCKEGRMKSAFDAFAEMHHIGVTPDTVTYNT 703

Query: 409 LIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKG 468
           LI G CK   +  A +  + +  + ++  I  +N  I G C + ++  A  +  +L   G
Sbjct: 704 LIGGYCKVLDMVSADEFLNKMYASGWDPDITTYNIRIQGFCSSQKISRAVTMLDELIAVG 763

Query: 469 LVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVV 528
           +VP  VTY+ M++ +C    L++A      + K    PNVVT N L+  F +     K +
Sbjct: 764 VVPNTVTYNTMMNAVCTD-MLDRAMVLTAKLLKMAFVPNVVTTNVLLSHFCKQGMPEKAL 822



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 114/398 (28%), Positives = 184/398 (46%), Gaps = 41/398 (10%)

Query: 214 ELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCL 273
           E+   M+  G+ P+    + L       G++  V  L   M+  GPRP    FN+MI C 
Sbjct: 229 EILSRMREVGVRPSSSAISILFRLLLRVGDYGSVWKLLRGMIRDGPRPCNHNFNIMILCF 288

Query: 274 CKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTV 333
           C+ G +  A  LL +M +    PD + YN L++ Y + GR   A      M   GCK ++
Sbjct: 289 CQKGYLRVAESLLFVMPKFCCEPDVYAYNILINAYRIRGRTSDALGFLHLMIKNGCKPSL 348

Query: 334 VSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDE 393
           ++++ +I  +C   NV EA  ++  I   G+   V  YNTL+SG F+A     A  L++E
Sbjct: 349 ITFSTIITAFCNEGNVVEARKIFEGIQEVGLSPNVAMYNTLMSGYFKARDVCQANMLYEE 408

Query: 394 MKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGR 453
           M+   + PD +T+NIL+ G  K     ++ +LF    ++       +++  + GLC AG+
Sbjct: 409 MRDKGIAPDGATFNILVAGNYKYGKEADSYELFRDWSLSSLVPDCSLYDVSVAGLCWAGQ 468

Query: 454 LDNAWELFHKLPQKGLVPTVVTY-----------------------------------SI 478
           LD A +    + +KG+ P+VV +                                   S 
Sbjct: 469 LDEAMQFLEDMLEKGMPPSVVAFNSVIAAYSRAGFEDNAHKAYKIMLMFGLVPSSSTCSS 528

Query: 479 MIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPE 538
           M+ GL +KG+L++A D L  M   G   N V F  L+ G+ +   T+    L ++M    
Sbjct: 529 MLLGLSKKGRLQEARDLLYKMIDKGLPVNKVAFTVLLDGYFKVGDTAGAHSLWYEM--EA 586

Query: 539 RNLVPDDTTFSIVVDLLAK----DEKYHECSAVSKSSY 572
           R + PD   FS  +D L+K    +E Y   S +SK  +
Sbjct: 587 RGICPDAIAFSAFIDGLSKAGLVEEAYEAFSEMSKKGF 624



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 49/212 (23%), Positives = 76/212 (35%), Gaps = 49/212 (23%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CK G   +  A   F  M H+  +P   ++N L G   K     +   F  K+ + G  P
Sbjct: 674 CKEG--RMKSAFDAFAEMHHIGVTPDTVTYNTLIGGYCKVLDMVSADEFLNKMYASGWDP 731

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLING------- 161
           D  T NI I       +G C   +I  A  +   +IA GV P+ +TY T++N        
Sbjct: 732 DITTYNIRI-------QGFCSSQKISRAVTMLDELIAVGVVPNTVTYNTMMNAVCTDMLD 784

Query: 162 ---------------------------FCRTGNLSVALRLHKKMVSGDYENGLISKTNIF 194
                                      FC+ G         K ++ G   N L+    I 
Sbjct: 785 RAMVLTAKLLKMAFVPNVVTTNVLLSHFCKQG------MPEKALIWGQKLNKLLRADFIG 838

Query: 195 SYSIIIDSLCKEGLVDKAKELFLEMKGRGINP 226
            + + I S+ K+      K ++  M G  + P
Sbjct: 839 YWLVYILSMDKQATAGSTKFIYWLMLGIVMMP 870


>gi|125561476|gb|EAZ06924.1| hypothetical protein OsI_29163 [Oryza sativa Indica Group]
          Length = 687

 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 139/489 (28%), Positives = 231/489 (47%), Gaps = 15/489 (3%)

Query: 58  EARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILI 117
           +A   F  MT     P   ++N +     K    +A  S   ++V  GL P+ +T N+L+
Sbjct: 214 DAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFSLRDQMVCHGLKPNAITYNVLL 273

Query: 118 NCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKK 177
           +       GLC   R+ E + L   M +  + PD  TY  L +G  R G+    L L  K
Sbjct: 274 S-------GLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGK 326

Query: 178 MVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHG 237
            +    +NG+      ++ SI+++ LCK+G V  A+E+   +   G+ P  V+  TLI+G
Sbjct: 327 SL----KNGVT--IGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLING 380

Query: 238 FCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPD 297
           +C  G  E     F +M     +P+ +T+N +I+ LCK  +I  A  LL  M   G+NP 
Sbjct: 381 YCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPT 440

Query: 298 RFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYR 357
             T+N+L+D Y   G+++    +   M   G K  VVSY  ++N +CK   + EA+++  
Sbjct: 441 VETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILD 500

Query: 358 QIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNN 417
            +    V      YN ++    + G    A  L ++MK   + P + TYN+LI GLC  +
Sbjct: 501 DMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQS 560

Query: 418 CVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYS 477
            + EA ++ + L  ++       +N LI   C  G +D A +L  ++ + G+  TV TY 
Sbjct: 561 QISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYH 620

Query: 478 IMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEP 537
            +I GL   G+L +       M +N   P+    N ++  + +     K  +L  +M + 
Sbjct: 621 QLISGLGGAGRLIEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQK 680

Query: 538 ERNLVPDDT 546
             N   DDT
Sbjct: 681 RNN--HDDT 687



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 135/493 (27%), Positives = 231/493 (46%), Gaps = 35/493 (7%)

Query: 71  PSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILIN-CFGNKERGLCV 129
           P P +SS NLL  A+     +  V   +  L S G  PD    N  +  C    + G  V
Sbjct: 121 PLPSLSSCNLLLEALLSLGRHADVRRAFGILASAGARPDTFAWNKAVQACVAAGDLGEAV 180

Query: 130 ----------------------------ENRIKEATWLFKNMIAFGVRPDVITYGTLING 161
                                         R  +A  +F  M    V P+ ITY T+I+G
Sbjct: 181 GMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDG 240

Query: 162 FCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKG 221
             + G+L     L  +MV     +GL  K N  +Y++++  LC+ G + +   L  EM  
Sbjct: 241 HIKGGDLEAGFSLRDQMVC----HGL--KPNAITYNVLLSGLCRAGRMGETSALLDEMAS 294

Query: 222 RGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINE 281
           + + P     + L  G    G+ + +  LF + L  G      T +++++ LCK GK++ 
Sbjct: 295 QKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKSLKNGVTIGDYTCSILLNGLCKDGKVSI 354

Query: 282 ANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILIN 341
           A  +L+ ++  GL P R  YN+L++GYC  G ++ A   F  M S+  K   ++YN LIN
Sbjct: 355 AEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALIN 414

Query: 342 GYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEP 401
           G CK   +  A  L  ++  NGV  TV T+NTL+    + GQ      +  EM+   ++P
Sbjct: 415 GLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKP 474

Query: 402 DLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELF 461
           ++ +Y  +++  CKN  + EAV +   +         +++N +ID   + G  D A+ L 
Sbjct: 475 NVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILV 534

Query: 462 HKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQN 521
            K+   G+ P++VTY+++I GLC + ++ +A + +  +  +   P+ V++NTL+      
Sbjct: 535 EKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYR 594

Query: 522 NKTSKVVELLHKM 534
               K ++L  +M
Sbjct: 595 GNIDKALDLQQRM 607



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 129/460 (28%), Positives = 226/460 (49%), Gaps = 50/460 (10%)

Query: 132 RIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKT 191
           R  +    F  + + G RPD   +   +      G+L  A+ + ++M      +G     
Sbjct: 140 RHADVRRAFGILASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRM----GRDG-APPP 194

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
           N FSY+++I  + + G    A E+F EM  R + P  +   T+I G    G+ E    L 
Sbjct: 195 NAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFSLR 254

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
            +M+  G +PN +T+NV++  LC+ G++ E + LL+ M  + + PD FTY+ L DG    
Sbjct: 255 DQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRN 314

Query: 312 GRIDTAREIFLSMHSKGCKHTVV----SYNILINGYCKILNVEEAMSLYRQIISNGVRQT 367
           G      +  LS+  K  K+ V     + +IL+NG CK   V  A  + + +++ G+  T
Sbjct: 315 GD----SKAMLSLFGKSLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPT 370

Query: 368 VITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFH 427
            + YNTL++G  Q G+   A   F +MK  +++PD  TYN LI+GLCK   +  A  L  
Sbjct: 371 RVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLM 430

Query: 428 MLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKG 487
            ++ N     +E FN LID   + G+L+  + +  ++ + GL P VV+Y  +++  C+ G
Sbjct: 431 EMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNG 490

Query: 488 KLEKA-------------------------------ND--FLLY--MEKNGCAPNVVTFN 512
           K+ +A                               ND  F+L   M+ NG +P++VT+N
Sbjct: 491 KIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYN 550

Query: 513 TLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVV 552
            L+ G    ++ S+  E+++ ++     L+PD  +++ ++
Sbjct: 551 LLIKGLCNQSQISEAEEIINSLS--NHRLIPDAVSYNTLI 588



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 115/419 (27%), Positives = 204/419 (48%), Gaps = 15/419 (3%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           C++G   + E       M   +  P   ++++LF  +++N    A++S + K +  G+  
Sbjct: 277 CRAG--RMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKSLKNGVTI 334

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
              T +IL+N       GLC + ++  A  + ++++  G+ P  + Y TLING+C+TG L
Sbjct: 335 GDYTCSILLN-------GLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGEL 387

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
             A     +M S         K +  +Y+ +I+ LCK   +  A++L +EM+  G+NP V
Sbjct: 388 EGAFSTFGQMKSRHI------KPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTV 441

Query: 229 VVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLEL 288
               TLI  +   G  E+   +  EM + G +PN++++  +++  CK GKI EA  +L+ 
Sbjct: 442 ETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDD 501

Query: 289 MIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILN 348
           M  + + P+   YN+++D Y   G  D A  +   M S G   ++V+YN+LI G C    
Sbjct: 502 MFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQ 561

Query: 349 VEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNI 408
           + EA  +   + ++ +    ++YNTL+S     G    A  L   M  Y ++  + TY+ 
Sbjct: 562 ISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQ 621

Query: 409 LIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQK 467
           LI GL     + E   L+  +  N       I N +++   K G    A +L  ++ QK
Sbjct: 622 LISGLGGAGRLIEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQK 680



 Score =  145 bits (365), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 97/343 (28%), Positives = 160/343 (46%), Gaps = 38/343 (11%)

Query: 258 GPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDR------------------- 298
            P P+L + N++++ L   G+  +      ++   G  PD                    
Sbjct: 120 APLPSLSSCNLLLEALLSLGRHADVRRAFGILASAGARPDTFAWNKAVQACVAAGDLGEA 179

Query: 299 -----------------FTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILIN 341
                            F+YN ++ G    GR   A E+F  M  +      ++YN +I+
Sbjct: 180 VGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMID 239

Query: 342 GYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEP 401
           G+ K  ++E   SL  Q++ +G++   ITYN LLSGL +AG+ G    L DEM    + P
Sbjct: 240 GHIKGGDLEAGFSLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVP 299

Query: 402 DLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELF 461
           D  TY+IL DGL +N   +  + LF     N    G    + L++GLCK G++  A E+ 
Sbjct: 300 DGFTYSILFDGLSRNGDSKAMLSLFGKSLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVL 359

Query: 462 HKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQN 521
             L   GLVPT V Y+ +I+G C+ G+LE A      M+     P+ +T+N L++G  + 
Sbjct: 360 QSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKA 419

Query: 522 NKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHEC 564
            + +   +LL +M +   N  P   TF+ ++D   +  +  +C
Sbjct: 420 ERITNAQDLLMEMQDNGVN--PTVETFNTLIDAYGRTGQLEKC 460


>gi|413926774|gb|AFW66706.1| hypothetical protein ZEAMMB73_789977 [Zea mays]
          Length = 642

 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 149/544 (27%), Positives = 244/544 (44%), Gaps = 85/544 (15%)

Query: 71  PSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVE 130
           P PP   +N L     +    D V + Y+ L+  G  PD  T N+L+       R LC  
Sbjct: 106 PPPPTPVYNRLILTALRESRLDLVEALYKDLLLAGAQPDVFTRNLLL-------RALCDA 158

Query: 131 NRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISK 190
            R++ A  +F+   A  VR +  ++G L  G+CR G    AL++   M S          
Sbjct: 159 GRMELAQRVFE---AMPVRNE-FSFGILARGYCRAGRSVDALKVLDGMPS---------- 204

Query: 191 TNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGL 250
            N+   + ++   CKEGLV++A+ L   M+ +G+ P VV   + I   C AG   +   +
Sbjct: 205 MNLVVCNTVVAGFCKEGLVEEAERLVERMRVQGLAPNVVTFNSRISALCKAGRVLDAYRI 264

Query: 251 FIEMLDLG----PRPNLLTFNVMIDCLC-------------------------------- 274
           F +M +      PRP+ +TF+VM+   C                                
Sbjct: 265 FKDMQEDWQHGLPRPDQVTFDVMLSGFCDAGFVDEARVLVDIMRCGGFLRRVESYNRWLS 324

Query: 275 ---KGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKH 331
              + G++ EA+ LL  M    ++P+ +TYN ++ G C  G+   AR +   + S     
Sbjct: 325 GLVRNGRVGEAHELLREMAHERIHPNSYTYNIIVSGLCKEGKAFDARRVENFIRSGVMSP 384

Query: 332 TVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLF 391
            VV+Y  L++ YC   N+  A  +  ++   G      TYN LL  L++AG+   A++L 
Sbjct: 385 DVVTYTSLLHAYCSKGNIAAANRILDEMAQKGCAPNSFTYNVLLQSLWRAGRTTEAERLL 444

Query: 392 DEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFH-MLEMNKFEFGIE----------- 439
           + M       D +  NI+IDGLC+N+ +  A+ +   M E      G             
Sbjct: 445 ERMSEKGYSLDTAGCNIIIDGLCRNSKLDVAMGIVDGMWEEGSTALGRLGNSFLSVVSDS 504

Query: 440 -----------IFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGK 488
                       ++ LI  LCK GR D A +   ++  K + P  V Y   IHG C+ GK
Sbjct: 505 SISQRCLPDRITYSILISALCKEGRFDEAKKKLLEMIVKDISPDSVIYDTFIHGYCKHGK 564

Query: 489 LEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTF 548
              A   L  MEK GC P+  T+N L+ GF + +K+ ++++L+ +M   E+ + P+  T+
Sbjct: 565 TSLAIKVLRDMEKKGCNPSTRTYNLLIRGFEEKHKSDEIMKLMSEME--EKGVSPNVLTY 622

Query: 549 SIVV 552
           + ++
Sbjct: 623 NSLI 626



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 116/420 (27%), Positives = 194/420 (46%), Gaps = 52/420 (12%)

Query: 105 GLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNM---IAFGV-RPDVITYGTLIN 160
           GL P+ +T N  I+        LC   R+ +A  +FK+M      G+ RPD +T+  +++
Sbjct: 237 GLAPNVVTFNSRIS-------ALCKAGRVLDAYRIFKDMQEDWQHGLPRPDQVTFDVMLS 289

Query: 161 GFCRTGNLSVALRL---------------HKKMVSGDYENGLISKT-------------- 191
           GFC  G +  A  L               + + +SG   NG + +               
Sbjct: 290 GFCDAGFVDEARVLVDIMRCGGFLRRVESYNRWLSGLVRNGRVGEAHELLREMAHERIHP 349

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
           N ++Y+II+  LCKEG    A+ +   ++   ++P VV  T+L+H +C  GN    N + 
Sbjct: 350 NSYTYNIIVSGLCKEGKAFDARRVENFIRSGVMSPDVVTYTSLLHAYCSKGNIAAANRIL 409

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
            EM   G  PN  T+NV++  L + G+  EA  LLE M ++G + D    N ++DG C  
Sbjct: 410 DEMAQKGCAPNSFTYNVLLQSLWRAGRTTEAERLLERMSEKGYSLDTAGCNIIIDGLCRN 469

Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
            ++D A  I   M  +G      +   L N +  +++           IS       ITY
Sbjct: 470 SKLDVAMGIVDGMWEEGS----TALGRLGNSFLSVVSDSS--------ISQRCLPDRITY 517

Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
           + L+S L + G+   A+K   EM + ++ PD   Y+  I G CK+     A+K+   +E 
Sbjct: 518 SILISALCKEGRFDEAKKKLLEMIVKDISPDSVIYDTFIHGYCKHGKTSLAIKVLRDMEK 577

Query: 432 NKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEK 491
                    +N LI G  +  + D   +L  ++ +KG+ P V+TY+ +I   C++G L +
Sbjct: 578 KGCNPSTRTYNLLIRGFEEKHKSDEIMKLMSEMEEKGVSPNVLTYNSLIKSFCQQGMLTR 637



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 119/464 (25%), Positives = 214/464 (46%), Gaps = 53/464 (11%)

Query: 133 IKEATWLFKNMIAFGVRPDVIT--YGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISK 190
           ++ A   F+++ A    P   T  Y  LI    R   L +   L+K ++         ++
Sbjct: 89  LRLAIPAFRSLRALASAPPPPTPVYNRLILTALRESRLDLVEALYKDLLLAG------AQ 142

Query: 191 TNIFSYSIIIDSLCKEGLVDKAKELFLEMKGR-----GINPAVVVCTTLIHGFCCAGNWE 245
            ++F+ ++++ +LC  G ++ A+ +F  M  R     GI         L  G+C AG   
Sbjct: 143 PDVFTRNLLLRALCDAGRMELAQRVFEAMPVRNEFSFGI---------LARGYCRAG--R 191

Query: 246 EVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLM 305
            V+ L  ++LD  P  NL+  N ++   CK G + EA  L+E M  +GL P+  T+NS +
Sbjct: 192 SVDAL--KVLDGMPSMNLVVCNTVVAGFCKEGLVEEAERLVERMRVQGLAPNVVTFNSRI 249

Query: 306 DGYCLVGRIDTAREIFLSMHSKGCKHTV-----VSYNILINGYCKILNVEEAMSLYRQII 360
              C  GR+  A  IF  M  +  +H +     V+++++++G+C    V+EA  L   + 
Sbjct: 250 SALCKAGRVLDAYRIFKDMQ-EDWQHGLPRPDQVTFDVMLSGFCDAGFVDEARVLVDIMR 308

Query: 361 SNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQ 420
             G  + V +YN  LSGL + G+ G A +L  EM    + P+  TYNI++ GLCK     
Sbjct: 309 CGGFLRRVESYNRWLSGLVRNGRVGEAHELLREMAHERIHPNSYTYNIIVSGLCKEGKAF 368

Query: 421 EAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMI 480
           +A ++ + +        +  +  L+   C  G +  A  +  ++ QKG  P   TY++++
Sbjct: 369 DARRVENFIRSGVMSPDVVTYTSLLHAYCSKGNIAAANRILDEMAQKGCAPNSFTYNVLL 428

Query: 481 HGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEP--- 537
             L R G+  +A   L  M + G + +    N ++ G  +N+K    + ++  M E    
Sbjct: 429 QSLWRAGRTTEAERLLERMSEKGYSLDTAGCNIIIDGLCRNSKLDVAMGIVDGMWEEGST 488

Query: 538 ------------------ERNLVPDDTTFSIVVDLLAKDEKYHE 563
                              +  +PD  T+SI++  L K+ ++ E
Sbjct: 489 ALGRLGNSFLSVVSDSSISQRCLPDRITYSILISALCKEGRFDE 532



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 97/358 (27%), Positives = 169/358 (47%), Gaps = 40/358 (11%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           C +G ++  EAR     M        + S+N     + +N          R++    + P
Sbjct: 292 CDAGFVD--EARVLVDIMRCGGFLRRVESYNRWLSGLVRNGRVGEAHELLREMAHERIHP 349

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGV-RPDVITYGTLINGFCRTGN 167
           +  T NI+++       GLC E +  +A  + +N I  GV  PDV+TY +L++ +C  GN
Sbjct: 350 NSYTYNIIVS-------GLCKEGKAFDARRV-ENFIRSGVMSPDVVTYTSLLHAYCSKGN 401

Query: 168 LSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPA 227
           ++ A R+  +M     + G     N F+Y++++ SL + G   +A+ L   M  +G +  
Sbjct: 402 IAAANRILDEMA----QKG--CAPNSFTYNVLLQSLWRAGRTTEAERLLERMSEKGYSLD 455

Query: 228 VVVCTTLIHGFC-----------CAGNWEE-------VNGLFIEMLD---LGPR--PNLL 264
              C  +I G C             G WEE       +   F+ ++    +  R  P+ +
Sbjct: 456 TAGCNIIIDGLCRNSKLDVAMGIVDGMWEEGSTALGRLGNSFLSVVSDSSISQRCLPDRI 515

Query: 265 TFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSM 324
           T++++I  LCK G+ +EA   L  MI + ++PD   Y++ + GYC  G+   A ++   M
Sbjct: 516 TYSILISALCKEGRFDEAKKKLLEMIVKDISPDSVIYDTFIHGYCKHGKTSLAIKVLRDM 575

Query: 325 HSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAG 382
             KGC  +  +YN+LI G+ +    +E M L  ++   GV   V+TYN+L+    Q G
Sbjct: 576 EKKGCNPSTRTYNLLIRGFEEKHKSDEIMKLMSEMEEKGVSPNVLTYNSLIKSFCQQG 633


>gi|297800058|ref|XP_002867913.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297313749|gb|EFH44172.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 724

 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 146/488 (29%), Positives = 233/488 (47%), Gaps = 31/488 (6%)

Query: 56  LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNI 115
           + EA  +   M      P  ++  L+  A+ +N   +  I ++RK++ +G  P+ +    
Sbjct: 256 IQEADRWLSGMIQRGFIPDNATCTLILSALCENGLVNRAIWYFRKMIDLGFKPNLINFTS 315

Query: 116 LINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLH 175
           LI+       GLC +  IK+A  + + M+  G +P+V T+  LI+G C+ G    A RL 
Sbjct: 316 LID-------GLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLF 368

Query: 176 KKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLI 235
            K+V  D     I K N+ +Y+ +I   CKE  +++A+ LF  MK +G+ P V   TTLI
Sbjct: 369 LKLVRSD-----IYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLI 423

Query: 236 HGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLN 295
           +G C AGN++    L   M D G RPN+ T+N +ID LCK  +  EA  LL      GL 
Sbjct: 424 NGHCKAGNFDRAYELMNLMDDEGFRPNIYTYNAVIDSLCKKSRAPEAYELLNKAFSCGLE 483

Query: 296 PDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSL 355
            D  TY  L+   C    I  A   F  M+  G +  +   NILI  +C+   ++E+  L
Sbjct: 484 ADGVTYTILIQEQCKQSDIKQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERL 543

Query: 356 YRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCK 415
           ++ ++S G+  T  TY +++SG  + G    A K F  MK +   PD  TY  LI GLCK
Sbjct: 544 FQLVVSLGLVPTKETYTSMISGYCKEGDFDLALKYFHNMKRHGCVPDSFTYGSLISGLCK 603

Query: 416 NNCVQEAVKLFHML--------EMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQK 467
            + V EA KL+  +        E+ +     E         CK     +A  +   L +K
Sbjct: 604 KSMVDEACKLYEAMIDRGLSPPEVTRVTLAYE--------YCKRNDSASAMIVLEPLDKK 655

Query: 468 GLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKV 527
             + TV T   ++  LC + K+  A  F   + +   + + VT         ++ K + V
Sbjct: 656 LWIRTVRT---LVRKLCSEKKVGVAALFFQKLLEKDSSADRVTLAAFTTACSESGKNNLV 712

Query: 528 VELLHKMA 535
            +L  +++
Sbjct: 713 ADLTERIS 720



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 132/444 (29%), Positives = 221/444 (49%), Gaps = 16/444 (3%)

Query: 105 GLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCR 164
           GL P  +T+N ++      E GL     I  A  +F  M   GV PD  ++  ++ G  R
Sbjct: 200 GLSPSSITMNCVLEI--AIESGL-----IDYAENVFDEMSVRGVCPDSSSFKLMVIGCFR 252

Query: 165 TGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGI 224
            G +  A R     +SG  + G I      + ++I+ +LC+ GLV++A   F +M   G 
Sbjct: 253 DGKIQEADR----WLSGMIQRGFIPDNA--TCTLILSALCENGLVNRAIWYFRKMIDLGF 306

Query: 225 NPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANG 284
            P ++  T+LI G C  G+ ++   +  EM+  G +PN+ T   +ID LCK G   +A  
Sbjct: 307 KPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFR 366

Query: 285 LLELMIQRGL-NPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGY 343
           L   +++  +  P+  TY S++ GYC   +++ A  +F  M  +G    V +Y  LING+
Sbjct: 367 LFLKLVRSDIYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGH 426

Query: 344 CKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDL 403
           CK  N + A  L   +   G R  + TYN ++  L +  +A  A +L ++     +E D 
Sbjct: 427 CKAGNFDRAYELMNLMDDEGFRPNIYTYNAVIDSLCKKSRAPEAYELLNKAFSCGLEADG 486

Query: 404 STYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHK 463
            TY ILI   CK + +++A+  F  +    FE  + + N LI   C+  ++  +  LF  
Sbjct: 487 VTYTILIQEQCKQSDIKQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQL 546

Query: 464 LPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNK 523
           +   GLVPT  TY+ MI G C++G  + A  +   M+++GC P+  T+ +L+ G  + + 
Sbjct: 547 VVSLGLVPTKETYTSMISGYCKEGDFDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSM 606

Query: 524 TSKVVELLHKMAEPERNLVPDDTT 547
             +  +L   M   +R L P + T
Sbjct: 607 VDEACKLYEAMI--DRGLSPPEVT 628



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 92/358 (25%), Positives = 179/358 (50%), Gaps = 18/358 (5%)

Query: 196 YSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEML 255
           Y +  DSL   G + KA E             V+ C  ++  F   G   E  G+ ++M 
Sbjct: 153 YLVTADSLIANGNLQKAHE-------------VMRC--MLRNFSEIGRLNEAVGMVMDMQ 197

Query: 256 DLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRID 315
           + G  P+ +T N +++   + G I+ A  + + M  RG+ PD  ++  ++ G    G+I 
Sbjct: 198 NQGLSPSSITMNCVLEIAIESGLIDYAENVFDEMSVRGVCPDSSSFKLMVIGCFRDGKIQ 257

Query: 316 TAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLL 375
            A      M  +G      +  ++++  C+   V  A+  +R++I  G +  +I + +L+
Sbjct: 258 EADRWLSGMIQRGFIPDNATCTLILSALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLI 317

Query: 376 SGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLF-HMLEMNKF 434
            GL + G    A ++ +EM     +P++ T+  LIDGLCK    ++A +LF  ++  + +
Sbjct: 318 DGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDIY 377

Query: 435 EFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKAND 494
           +  +  +  +I G CK  +L+ A  LF ++ ++GL P V TY+ +I+G C+ G  ++A +
Sbjct: 378 KPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGNFDRAYE 437

Query: 495 FLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVV 552
            +  M+  G  PN+ T+N ++    + ++  +  ELL+K       L  D  T++I++
Sbjct: 438 LMNLMDDEGFRPNIYTYNAVIDSLCKKSRAPEAYELLNKAFSC--GLEADGVTYTILI 493



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 103/388 (26%), Positives = 178/388 (45%), Gaps = 38/388 (9%)

Query: 207 GLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTF 266
           G +++A  + ++M+ +G++P+ +    ++     +G  +    +F EM   G  P+  +F
Sbjct: 184 GRLNEAVGMVMDMQNQGLSPSSITMNCVLEIAIESGLIDYAENVFDEMSVRGVCPDSSSF 243

Query: 267 NVMIDCLCKGGKINEANGLLELMIQRGLNPDRFT-------------------------- 300
            +M+    + GKI EA+  L  MIQRG  PD  T                          
Sbjct: 244 KLMVIGCFRDGKIQEADRWLSGMIQRGFIPDNATCTLILSALCENGLVNRAIWYFRKMID 303

Query: 301 ---------YNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEE 351
                    + SL+DG C  G I  A E+   M   G K  V ++  LI+G CK    E+
Sbjct: 304 LGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEK 363

Query: 352 AMSLYRQIISNGV-RQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILI 410
           A  L+ +++ + + +  V TY +++ G  +  +   A+ LF  MK   + P+++TY  LI
Sbjct: 364 AFRLFLKLVRSDIYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLI 423

Query: 411 DGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLV 470
           +G CK      A +L ++++   F   I  +N +ID LCK  R   A+EL +K    GL 
Sbjct: 424 NGHCKAGNFDRAYELMNLMDDEGFRPNIYTYNAVIDSLCKKSRAPEAYELLNKAFSCGLE 483

Query: 471 PTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVEL 530
              VTY+I+I   C++  +++A  F   M K G   ++   N L+  F +  K  +   L
Sbjct: 484 ADGVTYTILIQEQCKQSDIKQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERL 543

Query: 531 LHKMAEPERNLVPDDTTFSIVVDLLAKD 558
              +      LVP   T++ ++    K+
Sbjct: 544 FQLVVSL--GLVPTKETYTSMISGYCKE 569



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 86/288 (29%), Positives = 143/288 (49%), Gaps = 3/288 (1%)

Query: 277 GKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSY 336
           G++NEA G++  M  +GL+P   T N +++     G ID A  +F  M  +G      S+
Sbjct: 184 GRLNEAVGMVMDMQNQGLSPSSITMNCVLEIAIESGLIDYAENVFDEMSVRGVCPDSSSF 243

Query: 337 NILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKL 396
            +++ G  +   ++EA      +I  G      T   +LS L + G    A   F +M  
Sbjct: 244 KLMVIGCFRDGKIQEADRWLSGMIQRGFIPDNATCTLILSALCENGLVNRAIWYFRKMID 303

Query: 397 YNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDN 456
              +P+L  +  LIDGLCK   +++A ++   +  N ++  +     LIDGLCK G  + 
Sbjct: 304 LGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEK 363

Query: 457 AWELFHKLPQKGLV-PTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLM 515
           A+ LF KL +  +  P V TY+ MI G C++ KL +A      M++ G  PNV T+ TL+
Sbjct: 364 AFRLFLKLVRSDIYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLI 423

Query: 516 HGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
           +G  +     +  EL++ M   +    P+  T++ V+D L K  +  E
Sbjct: 424 NGHCKAGNFDRAYELMNLM--DDEGFRPNIYTYNAVIDSLCKKSRAPE 469



 Score = 58.5 bits (140), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 60/257 (23%), Positives = 98/257 (38%), Gaps = 53/257 (20%)

Query: 44  FLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVS 103
            + E CK    ++ +A  FF  M        +   N+L  A  + +        ++ +VS
Sbjct: 492 LIQEQCKQS--DIKQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVS 549

Query: 104 IGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFC 163
           +GL+P   T   +I+       G C E     A   F NM   G  PD  TYG+LI+G C
Sbjct: 550 LGLVPTKETYTSMIS-------GYCKEGDFDLALKYFHNMKRHGCVPDSFTYGSLISGLC 602

Query: 164 RTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRG 223
           +           K MV                              D+A +L+  M  RG
Sbjct: 603 K-----------KSMV------------------------------DEACKLYEAMIDRG 621

Query: 224 INPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEAN 283
           ++P  V   TL + + C  N      + +E LD   +  + T   ++  LC   K+  A 
Sbjct: 622 LSPPEVTRVTLAYEY-CKRNDSASAMIVLEPLD--KKLWIRTVRTLVRKLCSEKKVGVAA 678

Query: 284 GLLELMIQRGLNPDRFT 300
              + ++++  + DR T
Sbjct: 679 LFFQKLLEKDSSADRVT 695


>gi|414881815|tpg|DAA58946.1| TPA: hypothetical protein ZEAMMB73_360564 [Zea mays]
          Length = 792

 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 138/508 (27%), Positives = 244/508 (48%), Gaps = 18/508 (3%)

Query: 44  FLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVS 103
            +H  C +G   + +A   F  +     +P   ++ +L          D      R+++ 
Sbjct: 297 LMHGYCLNG--EVGKALDLFDEVVSDGVTPTNVTYGVLIKGCDAEGMTDETYKLCRQMIE 354

Query: 104 IGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFC 163
            GLLP     N++I       +GL  + R K+A  L K ++  GV PDV TYG LI+  C
Sbjct: 355 QGLLPSTYEFNLVI-------KGLLRDKRWKDAIGLLKLVVDTGV-PDVFTYGCLIHWLC 406

Query: 164 RTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRG 223
           +   L  A+ L  KM     E G+  K +I +Y  ++   C++G +D+A +L+ EM  +G
Sbjct: 407 KHQKLHEAVNLWDKM----KEAGV--KPSIVTYHSLLLGYCEKGRMDEALKLYSEMPDKG 460

Query: 224 INPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEAN 283
             P  V  TTL+ G+     ++    L  EM   G      T+N++I+ L    ++ E +
Sbjct: 461 FPPNEVTYTTLMKGYIKKKAFDNAYALLNEMRQNGVSCGDYTYNILINGLYMVNRVCEVD 520

Query: 284 GLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGY 343
            +L+  +  G  P   TYNS+++G+   G + +A  ++  M  KG    +V+Y   I+GY
Sbjct: 521 EMLKRFLSEGFVPTTMTYNSIINGFVKAGMMGSAFGMYRQMRKKGITPNIVTYTSFIDGY 580

Query: 344 CKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDL 403
           C+    + A+ L   +  +G++  +  YN  +    + G    A      +    + PD+
Sbjct: 581 CRTNCCDLAVKLLIYVRRDGIQPDIAAYNAFIDTFCKQGNMSRALHFLVLLLKDGLTPDV 640

Query: 404 STYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHK 463
           + YN  + G      + EA K ++ +   +     EI+  LIDG  K G +  A EL+ +
Sbjct: 641 TVYNSFVTGYKNLKMMAEASKFYYSMIKQRVVADTEIYTTLIDGFSKVGNVAFALELYSE 700

Query: 464 LPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNK 523
           +    ++P   T++ + HGLCR G ++ A   L  M +   +PN+VT+N L++  +++ K
Sbjct: 701 MMANHVIPDDKTFTALTHGLCRSGDIDGAKRLLDDMRRLDVSPNIVTYNMLINACVRDGK 760

Query: 524 TSKVVELLHKMAEPERNLVPDDTTFSIV 551
             +  +L  +M      +VPDDTT+ I+
Sbjct: 761 LQEAFQLHDEML--SSGVVPDDTTYDIL 786



 Score =  189 bits (479), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 129/463 (27%), Positives = 222/463 (47%), Gaps = 16/463 (3%)

Query: 90  HYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVR 149
           H DAV   + ++   G+ PD     I I+       GLC       A  +   M   G  
Sbjct: 201 HCDAV-RLFDEMAGAGVKPDERVYAITIS-------GLCKLRDADRALQVLGKMREAGFE 252

Query: 150 PDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLV 209
           P  +TY ++++   +   +  ALRL  +M+    +     K ++   ++++   C  G V
Sbjct: 253 PWELTYSSVVDVLVKVRRMDEALRLKDQMLLATGK-----KMDVVLATMLMHGYCLNGEV 307

Query: 210 DKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVM 269
            KA +LF E+   G+ P  V    LI G    G  +E   L  +M++ G  P+   FN++
Sbjct: 308 GKALDLFDEVVSDGVTPTNVTYGVLIKGCDAEGMTDETYKLCRQMIEQGLLPSTYEFNLV 367

Query: 270 IDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGC 329
           I  L +  +  +A GLL+L++  G+ PD FTY  L+   C   ++  A  ++  M   G 
Sbjct: 368 IKGLLRDKRWKDAIGLLKLVVDTGV-PDVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAGV 426

Query: 330 KHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQK 389
           K ++V+Y+ L+ GYC+   ++EA+ LY ++   G     +TY TL+ G  +      A  
Sbjct: 427 KPSIVTYHSLLLGYCEKGRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAYA 486

Query: 390 LFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLC 449
           L +EM+   V     TYNILI+GL   N V E  ++        F      +N +I+G  
Sbjct: 487 LLNEMRQNGVSCGDYTYNILINGLYMVNRVCEVDEMLKRFLSEGFVPTTMTYNSIINGFV 546

Query: 450 KAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVV 509
           KAG + +A+ ++ ++ +KG+ P +VTY+  I G CR    + A   L+Y+ ++G  P++ 
Sbjct: 547 KAGMMGSAFGMYRQMRKKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYVRRDGIQPDIA 606

Query: 510 TFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVV 552
            +N  +  F +    S+ +  L  + +    L PD T ++  V
Sbjct: 607 AYNAFIDTFCKQGNMSRALHFLVLLLKD--GLTPDVTVYNSFV 647



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 116/420 (27%), Positives = 200/420 (47%), Gaps = 12/420 (2%)

Query: 140 FKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMV-SGDYENGLISKTNIFSYSI 198
           +  M+  GV PD  +   L+       + + AL L  +M   G Y +  +       Y +
Sbjct: 138 YSRMVTRGVVPDAKSRTDLLVTTALGASAADALTLFDEMRGKGCYADAKM-------YDV 190

Query: 199 IIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLG 258
           +I +  + G+   A  LF EM G G+ P   V    I G C   + +    +  +M + G
Sbjct: 191 VIRACVRGGMHCDAVRLFDEMAGAGVKPDERVYAITISGLCKLRDADRALQVLGKMREAG 250

Query: 259 PRPNLLTFNVMIDCLCKGGKINEANGLL-ELMIQRGLNPDRFTYNSLMDGYCLVGRIDTA 317
             P  LT++ ++D L K  +++EA  L  ++++  G   D      LM GYCL G +  A
Sbjct: 251 FEPWELTYSSVVDVLVKVRRMDEALRLKDQMLLATGKKMDVVLATMLMHGYCLNGEVGKA 310

Query: 318 REIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSG 377
            ++F  + S G   T V+Y +LI G       +E   L RQ+I  G+  +   +N ++ G
Sbjct: 311 LDLFDEVVSDGVTPTNVTYGVLIKGCDAEGMTDETYKLCRQMIEQGLLPSTYEFNLVIKG 370

Query: 378 LFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFG 437
           L +  +   A  L  ++ +    PD+ TY  LI  LCK+  + EAV L+  ++    +  
Sbjct: 371 LLRDKRWKDAIGLL-KLVVDTGVPDVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPS 429

Query: 438 IEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLL 497
           I  ++ L+ G C+ GR+D A +L+ ++P KG  P  VTY+ ++ G  +K   + A   L 
Sbjct: 430 IVTYHSLLLGYCEKGRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAYALLN 489

Query: 498 YMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAK 557
            M +NG +    T+N L++G    N+  +V E+L +        VP   T++ +++   K
Sbjct: 490 EMRQNGVSCGDYTYNILINGLYMVNRVCEVDEMLKRFL--SEGFVPTTMTYNSIINGFVK 547



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 93/354 (26%), Positives = 165/354 (46%), Gaps = 6/354 (1%)

Query: 216 FLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCK 275
           +  M  RG+ P     T L+       +  +   LF EM   G   +   ++V+I    +
Sbjct: 138 YSRMVTRGVVPDAKSRTDLLVTTALGASAADALTLFDEMRGKGCYADAKMYDVVIRACVR 197

Query: 276 GGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVS 335
           GG   +A  L + M   G+ PD   Y   + G C +   D A ++   M   G +   ++
Sbjct: 198 GGMHCDAVRLFDEMAGAGVKPDERVYAITISGLCKLRDADRALQVLGKMREAGFEPWELT 257

Query: 336 YNILINGYCKILNVEEAMSLYRQ-IISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEM 394
           Y+ +++   K+  ++EA+ L  Q +++ G +  V+    L+ G    G+ G A  LFDE+
Sbjct: 258 YSSVVDVLVKVRRMDEALRLKDQMLLATGKKMDVVLATMLMHGYCLNGEVGKALDLFDEV 317

Query: 395 KLYNVEPDLSTYNILIDGLCKNNCVQEAVKL-FHMLEMNKFEFGIEIFNCLIDGLCKAGR 453
               V P   TY +LI G        E  KL   M+E        E FN +I GL +  R
Sbjct: 318 VSDGVTPTNVTYGVLIKGCDAEGMTDETYKLCRQMIEQGLLPSTYE-FNLVIKGLLRDKR 376

Query: 454 LDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNT 513
             +A  L   +   G VP V TY  +IH LC+  KL +A +    M++ G  P++VT+++
Sbjct: 377 WKDAIGLLKLVVDTG-VPDVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPSIVTYHS 435

Query: 514 LMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAV 567
           L+ G+ +  +  + ++L  +M  P++   P++ T++ ++    K + +    A+
Sbjct: 436 LLLGYCEKGRMDEALKLYSEM--PDKGFPPNEVTYTTLMKGYIKKKAFDNAYAL 487


>gi|222625337|gb|EEE59469.1| hypothetical protein OsJ_11675 [Oryza sativa Japonica Group]
          Length = 1095

 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 131/487 (26%), Positives = 240/487 (49%), Gaps = 51/487 (10%)

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           D  T NI++N        LC + ++ +A  + + M    + P+ +TY T++N + + G  
Sbjct: 229 DVTTCNIVLN-------SLCTQGKLSKAESMLQKMKNCRL-PNAVTYNTILNWYVKKGRC 280

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCK----------------------- 205
             ALR+   M     +NG+  + ++++Y+I+ID LCK                       
Sbjct: 281 KSALRILDDM----EKNGI--EADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNLTPDE 334

Query: 206 ------------EGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIE 253
                       EG ++ A  +F +M  + + P+V   T LI G+C  G  +E   +  E
Sbjct: 335 CSYNTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYE 394

Query: 254 MLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGR 313
           M   G RP+ LT++ +++  CK  K+  A  L++ +  R ++ +R  Y  L+DG+C +G 
Sbjct: 395 MQITGVRPSELTYSALLNGYCKHSKLGPALDLIKYLRSRSISINRTMYTILIDGFCQLGE 454

Query: 314 IDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNT 373
           +  A++I   M + G    V++Y+ LING CK+  + E   +  ++  +GV    + Y T
Sbjct: 455 VSKAKQILKCMLADGIDPDVITYSALINGMCKMGMIHETKEILSRMQKSGVLPNNVLYTT 514

Query: 374 LLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNK 433
           L+    +AG A  A K F ++    +  +   +N L+    +   + EA +    +   K
Sbjct: 515 LVFYFCKAGHAKEALKYFVDIYRSGLVANSVIHNALLCSFYREGMIAEAEQFKQYMSRMK 574

Query: 434 FEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKAN 493
             F +  FNC+ID  C+ G +  A+ ++  + + G  P + TY  ++ GLC+ G L +A 
Sbjct: 575 ISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAK 634

Query: 494 DFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
           +F++Y+ +  CA +  T NTL+ G  ++    + ++L  KM    RN++PD  T++I++D
Sbjct: 635 EFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMV--TRNILPDTYTYTILLD 692

Query: 554 LLAKDEK 560
              K  K
Sbjct: 693 GFCKRGK 699



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 135/500 (27%), Positives = 245/500 (49%), Gaps = 53/500 (10%)

Query: 83   GAVAKNRHYDAVI-SFYRK------------LVSIGLLPDFLTLNILINCFGNKERGLCV 129
            G VA +  ++A++ SFYR+            +  + +  D  + N +I+ +       C 
Sbjct: 539  GLVANSVIHNALLCSFYREGMIAEAEQFKQYMSRMKISFDVASFNCIIDSY-------CQ 591

Query: 130  ENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVA----LRLHKKMVSGDYEN 185
               + EA  ++ NM+  G  PD+ TYG+L+ G C+ G+L  A    + L +K  + D + 
Sbjct: 592  RGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEK- 650

Query: 186  GLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWE 245
                     + + ++  +CK G +D+A +L  +M  R I P     T L+ GFC  G   
Sbjct: 651  ---------TLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKVV 701

Query: 246  EVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLL-ELMIQRGLNPDRFTYNSL 304
                L   ML+ G  P+ + +  +++ L   G++  A+ +  E++ + GL  D   YNS+
Sbjct: 702  PALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYADCIAYNSM 761

Query: 305  MDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGV 364
            M+GY   G+I+    +  +MH      +  SYNIL++GY K   +   + LYR ++  G+
Sbjct: 762  MNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLYRDMVKEGI 821

Query: 365  RQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVK 424
            +   +TY  L+ GL + G    A K  ++M L  V PD   ++ILI    + + +  A++
Sbjct: 822  KPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEGVFPDNLAFDILIKAFSEKSKMSNALQ 881

Query: 425  LFHMLEM-----NKFEFGIEIF-----------NCLIDGLCKAGRLDNAWELFHKLPQKG 468
            LF  ++        FE   ++            + ++ GLCK G+++ A  +F  + + G
Sbjct: 882  LFSYMKWVGDIDGAFELKEDMKALGVVPSEVAESSIVRGLCKCGKVEEAIIVFSSIMRAG 941

Query: 469  LVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVV 528
            +VPT+ T++ ++HGLC++ K++ A      ME  G   +VVT+N L+ G          +
Sbjct: 942  MVPTIATFTTLMHGLCKEFKIDDAFHLKQLMESCGLKVDVVTYNVLITGLCNKKCICDAL 1001

Query: 529  ELLHKMAEPERNLVPDDTTF 548
            +L  +M    + L+P+ TT+
Sbjct: 1002 DLYEEM--KSKGLLPNITTY 1019



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 116/486 (23%), Positives = 222/486 (45%), Gaps = 48/486 (9%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
           P   ++N +     K     + +     +   G+  D  T NI+I+        LC   R
Sbjct: 262 PNAVTYNTILNWYVKKGRCKSALRILDDMEKNGIEADLYTYNIMID-------KLCKLKR 314

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
              A  L K M    + PD  +Y TLI+GF   G +++A+ +  +M+          K +
Sbjct: 315 SARAYLLLKRMREVNLTPDECSYNTLIHGFFGEGKINLAIYIFNQMLRQSL------KPS 368

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
           + +Y+ +ID  C+ G  D+A+ +  EM+  G+ P+ +  + L++G+C          L  
Sbjct: 369 VATYTALIDGYCRNGRTDEARRVLYEMQITGVRPSELTYSALLNGYCKHSKLGPALDLIK 428

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
            +       N   + ++ID  C+ G++++A  +L+ M+  G++PD  TY++L++G C +G
Sbjct: 429 YLRSRSISINRTMYTILIDGFCQLGEVSKAKQILKCMLADGIDPDVITYSALINGMCKMG 488

Query: 313 RIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYN 372
            I   +EI   M   G     V Y  L+  +CK  + +EA+  +  I  +G+    + +N
Sbjct: 489 MIHETKEILSRMQKSGVLPNNVLYTTLVFYFCKAGHAKEALKYFVDIYRSGLVANSVIHN 548

Query: 373 TLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLF------ 426
            LL   ++ G    A++    M    +  D++++N +ID  C+   V EA  ++      
Sbjct: 549 ALLCSFYREGMIAEAEQFKQYMSRMKISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRH 608

Query: 427 --------------------HMLEMNKFEFGI---------EIFNCLIDGLCKAGRLDNA 457
                               H+++  +F   +         +  N L+ G+CK G LD A
Sbjct: 609 GWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEA 668

Query: 458 WELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHG 517
            +L  K+  + ++P   TY+I++ G C++GK+  A   L  M + G  P+ + +  L++G
Sbjct: 669 LDLCEKMVTRNILPDTYTYTILLDGFCKRGKVVPALILLQMMLEKGLVPDTIAYTCLLNG 728

Query: 518 FLQNNK 523
            +   +
Sbjct: 729 LVNEGQ 734



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 144/505 (28%), Positives = 236/505 (46%), Gaps = 32/505 (6%)

Query: 56   LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNI 115
            + EA  F  YM+ M+ S  ++SFN +  +  +  +     S Y  +V  G  PD  T   
Sbjct: 560  IAEAEQFKQYMSRMKISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICT--- 616

Query: 116  LINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLH 175
                +G+  RGLC    + +A      ++      D  T  TL+ G C+ G L  AL L 
Sbjct: 617  ----YGSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLC 672

Query: 176  KKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLI 235
            +KMV+    N L    + ++Y+I++D  CK G V  A  L   M  +G+ P  +  T L+
Sbjct: 673  EKMVT---RNIL---PDTYTYTILLDGFCKRGKVVPALILLQMMLEKGLVPDTIAYTCLL 726

Query: 236  HGFCCAGNWEEVNGLFIEML-DLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGL 294
            +G    G  +  + +F E++   G   + + +N M++   KGG+INE   L+  M +  +
Sbjct: 727  NGLVNEGQVKAASYMFQEIICKEGLYADCIAYNSMMNGYLKGGQINEIERLMRNMHENEV 786

Query: 295  NPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMS 354
             P   +YN LM GY   G++     ++  M  +G K   V+Y +LI G C+   +E A+ 
Sbjct: 787  YPSSASYNILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVK 846

Query: 355  LYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLF----------------DEMKLYN 398
               +++  GV    + ++ L+    +  +   A +LF                ++MK   
Sbjct: 847  FLEKMVLEGVFPDNLAFDILIKAFSEKSKMSNALQLFSYMKWVGDIDGAFELKEDMKALG 906

Query: 399  VEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAW 458
            V P     + ++ GLCK   V+EA+ +F  +        I  F  L+ GLCK  ++D+A+
Sbjct: 907  VVPSEVAESSIVRGLCKCGKVEEAIIVFSSIMRAGMVPTIATFTTLMHGLCKEFKIDDAF 966

Query: 459  ELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGF 518
             L   +   GL   VVTY+++I GLC K  +  A D    M+  G  PN+ T+ TL  G 
Sbjct: 967  HLKQLMESCGLKVDVVTYNVLITGLCNKKCICDALDLYEEMKSKGLLPNITTYITLT-GA 1025

Query: 519  LQNNKTSKVVELLHKMAEPERNLVP 543
            +    T +  E L K  E +R +VP
Sbjct: 1026 MYATGTMQDGEKLLKDIE-DRGIVP 1049



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 96/362 (26%), Positives = 184/362 (50%), Gaps = 3/362 (0%)

Query: 191 TNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGL 250
           TN+FS  +++++  KEG V  A      M   G   ++  C  +++        E V   
Sbjct: 158 TNLFSVDLLVNAYVKEGKVLDAAAAIFFMDECGFKASLFSCNNILNALVGINKSEYVWLF 217

Query: 251 FIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCL 310
             E LD     ++ T N++++ LC  GK+++A  +L+ M    L P+  TYN++++ Y  
Sbjct: 218 LKESLDRKFPLDVTTCNIVLNSLCTQGKLSKAESMLQKMKNCRL-PNAVTYNTILNWYVK 276

Query: 311 VGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVIT 370
            GR  +A  I   M   G +  + +YNI+I+  CK+     A  L +++    +     +
Sbjct: 277 KGRCKSALRILDDMEKNGIEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNLTPDECS 336

Query: 371 YNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLE 430
           YNTL+ G F  G+   A  +F++M   +++P ++TY  LIDG C+N    EA ++ + ++
Sbjct: 337 YNTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQ 396

Query: 431 MNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLE 490
           +         ++ L++G CK  +L  A +L   L  + +      Y+I+I G C+ G++ 
Sbjct: 397 ITGVRPSELTYSALLNGYCKHSKLGPALDLIKYLRSRSISINRTMYTILIDGFCQLGEVS 456

Query: 491 KANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSI 550
           KA   L  M  +G  P+V+T++ L++G  +     +  E+L +M +    ++P++  ++ 
Sbjct: 457 KAKQILKCMLADGIDPDVITYSALINGMCKMGMIHETKEILSRMQKS--GVLPNNVLYTT 514

Query: 551 VV 552
           +V
Sbjct: 515 LV 516



 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 109/440 (24%), Positives = 205/440 (46%), Gaps = 30/440 (6%)

Query: 49   CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
            C+ G  +L +A+ F  Y+     +    + N L   + K+   D  +    K+V+  +LP
Sbjct: 625  CQGG--HLVQAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILP 682

Query: 109  DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
            D  T  IL++       G C   ++  A  L + M+  G+ PD I Y  L+NG    G +
Sbjct: 683  DTYTYTILLD-------GFCKRGKVVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQV 735

Query: 169  SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
              A  + ++++    + GL +  +  +Y+ +++   K G +++ + L   M    + P+ 
Sbjct: 736  KAASYMFQEIIC---KEGLYA--DCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSS 790

Query: 229  VVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLEL 288
                 L+HG+   G       L+ +M+  G +P+ +T+ ++I  LC+ G I  A   LE 
Sbjct: 791  ASYNILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEK 850

Query: 289  MIQRGLNPDRFTYNSLMDGYC----------------LVGRIDTAREIFLSMHSKGCKHT 332
            M+  G+ PD   ++ L+  +                  VG ID A E+   M + G   +
Sbjct: 851  MVLEGVFPDNLAFDILIKAFSEKSKMSNALQLFSYMKWVGDIDGAFELKEDMKALGVVPS 910

Query: 333  VVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFD 392
             V+ + ++ G CK   VEEA+ ++  I+  G+  T+ T+ TL+ GL +  +   A  L  
Sbjct: 911  EVAESSIVRGLCKCGKVEEAIIVFSSIMRAGMVPTIATFTTLMHGLCKEFKIDDAFHLKQ 970

Query: 393  EMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAG 452
             M+   ++ D+ TYN+LI GLC   C+ +A+ L+  ++       I  +  L   +   G
Sbjct: 971  LMESCGLKVDVVTYNVLITGLCNKKCICDALDLYEEMKSKGLLPNITTYITLTGAMYATG 1030

Query: 453  RLDNAWELFHKLPQKGLVPT 472
             + +  +L   +  +G+VP+
Sbjct: 1031 TMQDGEKLLKDIEDRGIVPS 1050



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 105/421 (24%), Positives = 176/421 (41%), Gaps = 67/421 (15%)

Query: 33   AVSSPETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYD 92
            A +  E  LN  L   CK G   L+EA      M      P   ++ +L     K     
Sbjct: 644  ACAIDEKTLNTLLVGICKHG--TLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKVV 701

Query: 93   AVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAF-GVRPD 151
              +   + ++  GL+PD +    L+N       GL  E ++K A+++F+ +I   G+  D
Sbjct: 702  PALILLQMMLEKGLVPDTIAYTCLLN-------GLVNEGQVKAASYMFQEIICKEGLYAD 754

Query: 152  VITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDK 211
             I Y +++NG+ + G ++   RL + M    +EN +   +   SY+I++    K+G + +
Sbjct: 755  CIAYNSMMNGYLKGGQINEIERLMRNM----HENEVYPSSA--SYNILMHGYIKKGQLSR 808

Query: 212  AKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMID 271
               L+ +M   GI P  V    LI G C  G  E       +M+  G  P+ L F+++I 
Sbjct: 809  TLYLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEGVFPDNLAFDILIK 868

Query: 272  C---------------------------------------------------LCKGGKIN 280
                                                                LCK GK+ 
Sbjct: 869  AFSEKSKMSNALQLFSYMKWVGDIDGAFELKEDMKALGVVPSEVAESSIVRGLCKCGKVE 928

Query: 281  EANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILI 340
            EA  +   +++ G+ P   T+ +LM G C   +ID A  +   M S G K  VV+YN+LI
Sbjct: 929  EAIIVFSSIMRAGMVPTIATFTTLMHGLCKEFKIDDAFHLKQLMESCGLKVDVVTYNVLI 988

Query: 341  NGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVE 400
             G C    + +A+ LY ++ S G+   + TY TL   ++  G     +KL  +++   + 
Sbjct: 989  TGLCNKKCICDALDLYEEMKSKGLLPNITTYITLTGAMYATGTMQDGEKLLKDIEDRGIV 1048

Query: 401  P 401
            P
Sbjct: 1049 P 1049


>gi|356519757|ref|XP_003528536.1| PREDICTED: protein Rf1, mitochondrial-like [Glycine max]
          Length = 871

 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 142/505 (28%), Positives = 245/505 (48%), Gaps = 16/505 (3%)

Query: 32  AAVSSPETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHY 91
           + V          LH  C+ G  N+ EAR  F  +  M  +P  + +N L     K R  
Sbjct: 311 SGVEPSVATFTTILHALCREG--NVVEARKLFDGIQDMGIAPNAAIYNTLMDGYFKAREV 368

Query: 92  DAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPD 151
                 Y ++ + G+ PD +T NIL+  +G+ + G     RI+++  L K++I  G+  D
Sbjct: 369 AQASLLYEEMRTTGVSPDCVTFNILV--WGHYKYG-----RIEDSDRLLKDLIVSGLFLD 421

Query: 152 VITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDK 211
              Y  +++  C  G L  A++L ++++    E GL    ++ +++ +I +  + GL DK
Sbjct: 422 SSLYDVMVSSLCWAGRLDEAMKLLQELL----EKGL--TLSVVAFNSLIGAYSRAGLEDK 475

Query: 212 AKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMID 271
           A E +  M   G  P+   C +L+ G C  G  +E   L   ML+ G   N + + V++D
Sbjct: 476 AFEAYRIMVRCGFTPSSSTCNSLLMGLCRKGWLQEARILLYRMLEKGFPINKVAYTVLLD 535

Query: 272 CLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKH 331
              K   +  A  L + M +RG+ PD   + +L+DG    G ++ A E+FL M + G   
Sbjct: 536 GYFKMNNLEGAQFLWKEMKERGIYPDAVAFTALIDGLSKAGNVEEAYEVFLEMSAIGFVP 595

Query: 332 TVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLF 391
              +YN LI G C    V EA+ L +++   G+     T+N ++ G  + GQ  +A + F
Sbjct: 596 NNFAYNSLIRGLCDCGRVTEALKLEKEMRQKGLLSDTFTFNIIIDGFCRRGQMKFAIETF 655

Query: 392 DEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKA 451
            +M+   + PD+ T+NILI G CK   +  A ++ + +     +  I  +N  + G C+ 
Sbjct: 656 LDMQRIGLLPDIFTFNILIGGYCKAFDMVGAGEIVNKMYSCGLDPDITTYNTYMHGYCRM 715

Query: 452 GRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTF 511
            +++ A  +  +L   G+VP  VTY+ M+ G+C    L++A      + K G  PNV+T 
Sbjct: 716 RKMNQAVIILDQLISAGIVPDTVTYNTMLSGIC-SDILDRAMILTAKLLKMGFIPNVITT 774

Query: 512 NTLMHGFLQNNKTSKVVELLHKMAE 536
           N L+  F +     K +    K+ E
Sbjct: 775 NMLLSHFCKQGMPEKALIWGQKLRE 799



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 152/514 (29%), Positives = 248/514 (48%), Gaps = 54/514 (10%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
           P +SS  +L   + +   Y +V   ++ ++  G  P  LT N +I C      G C ++R
Sbjct: 210 PGLSSITILLRLLLRIGDYGSVWKLFKDMIFKGPRPSNLTFNAMI-C------GFCRQHR 262

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
           +     L   M  F   PDV+T+  LIN  C  G   VA+     MV    E       +
Sbjct: 263 VVVGESLLHLMPKFMCSPDVVTFNILINACCIGGRTWVAIDWLHLMVRSGVE------PS 316

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
           + +++ I+ +LC+EG V +A++LF  ++  GI P   +  TL+ G+  A    + + L+ 
Sbjct: 317 VATFTTILHALCREGNVVEARKLFDGIQDMGIAPNAAIYNTLMDGYFKAREVAQASLLYE 376

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
           EM   G  P+ +TFN+++    K G+I +++ LL+ +I  GL  D   Y+ ++   C  G
Sbjct: 377 EMRTTGVSPDCVTFNILVWGHYKYGRIEDSDRLLKDLIVSGLFLDSSLYDVMVSSLCWAG 436

Query: 313 RIDTAREIFLSMHSKGCKHTVVSYNILINGY----------------------------- 343
           R+D A ++   +  KG   +VV++N LI  Y                             
Sbjct: 437 RLDEAMKLLQELLEKGLTLSVVAFNSLIGAYSRAGLEDKAFEAYRIMVRCGFTPSSSTCN 496

Query: 344 ------CKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLY 397
                 C+   ++EA  L  +++  G     + Y  LL G F+      AQ L+ EMK  
Sbjct: 497 SLLMGLCRKGWLQEARILLYRMLEKGFPINKVAYTVLLDGYFKMNNLEGAQFLWKEMKER 556

Query: 398 NVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIF--NCLIDGLCKAGRLD 455
            + PD   +  LIDGL K   V+EA ++F  LEM+   F    F  N LI GLC  GR+ 
Sbjct: 557 GIYPDAVAFTALIDGLSKAGNVEEAYEVF--LEMSAIGFVPNNFAYNSLIRGLCDCGRVT 614

Query: 456 NAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLM 515
            A +L  ++ QKGL+    T++I+I G CR+G+++ A +  L M++ G  P++ TFN L+
Sbjct: 615 EALKLEKEMRQKGLLSDTFTFNIIIDGFCRRGQMKFAIETFLDMQRIGLLPDIFTFNILI 674

Query: 516 HGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFS 549
            G+ +        E+++KM      L PD TT++
Sbjct: 675 GGYCKAFDMVGAGEIVNKMYSC--GLDPDITTYN 706



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 120/420 (28%), Positives = 214/420 (50%), Gaps = 11/420 (2%)

Query: 136 ATW-LFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIF 194
           + W LFK+MI  G RP  +T+  +I GFCR   + V   L   M         +   ++ 
Sbjct: 230 SVWKLFKDMIFKGPRPSNLTFNAMICGFCRQHRVVVGESLLHLMPK------FMCSPDVV 283

Query: 195 SYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEM 254
           +++I+I++ C  G    A +    M   G+ P+V   TT++H  C  GN  E   LF  +
Sbjct: 284 TFNILINACCIGGRTWVAIDWLHLMVRSGVEPSVATFTTILHALCREGNVVEARKLFDGI 343

Query: 255 LDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRI 314
            D+G  PN   +N ++D   K  ++ +A+ L E M   G++PD  T+N L+ G+   GRI
Sbjct: 344 QDMGIAPNAAIYNTLMDGYFKAREVAQASLLYEEMRTTGVSPDCVTFNILVWGHYKYGRI 403

Query: 315 DTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTL 374
           + +  +   +   G       Y+++++  C    ++EAM L ++++  G+  +V+ +N+L
Sbjct: 404 EDSDRLLKDLIVSGLFLDSSLYDVMVSSLCWAGRLDEAMKLLQELLEKGLTLSVVAFNSL 463

Query: 375 LSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEA-VKLFHMLEMNK 433
           +    +AG    A + +  M      P  ST N L+ GLC+   +QEA + L+ MLE   
Sbjct: 464 IGAYSRAGLEDKAFEAYRIMVRCGFTPSSSTCNSLLMGLCRKGWLQEARILLYRMLE-KG 522

Query: 434 FEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKAN 493
           F      +  L+DG  K   L+ A  L+ ++ ++G+ P  V ++ +I GL + G +E+A 
Sbjct: 523 FPINKVAYTVLLDGYFKMNNLEGAQFLWKEMKERGIYPDAVAFTALIDGLSKAGNVEEAY 582

Query: 494 DFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
           +  L M   G  PN   +N+L+ G     + ++ ++L  +M   ++ L+ D  TF+I++D
Sbjct: 583 EVFLEMSAIGFVPNNFAYNSLIRGLCDCGRVTEALKLEKEMR--QKGLLSDTFTFNIIID 640



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 120/426 (28%), Positives = 199/426 (46%), Gaps = 37/426 (8%)

Query: 177 KMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIH 236
           K+V   + N  + +++    + ++      G+  +A E+   M+G G+ P +   T L+ 
Sbjct: 161 KIVDFMWRNHAMYESDFSVLNTLLRGFLNVGMGFEALEVLRMMRGVGVRPGLSSITILLR 220

Query: 237 GFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNP 296
                G++  V  LF +M+  GPRP+ LTFN MI   C+  ++     LL LM +   +P
Sbjct: 221 LLLRIGDYGSVWKLFKDMIFKGPRPSNLTFNAMICGFCRQHRVVVGESLLHLMPKFMCSP 280

Query: 297 DRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLY 356
           D  T+N L++  C+ GR   A +    M   G + +V ++  +++  C+  NV EA  L+
Sbjct: 281 DVVTFNILINACCIGGRTWVAIDWLHLMVRSGVEPSVATFTTILHALCREGNVVEARKLF 340

Query: 357 RQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKN 416
             I   G+      YNTL+ G F+A +   A  L++EM+   V PD  T+NIL+ G  K 
Sbjct: 341 DGIQDMGIAPNAAIYNTLMDGYFKAREVAQASLLYEEMRTTGVSPDCVTFNILVWGHYKY 400

Query: 417 NCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVV-- 474
             ++++ +L   L ++       +++ ++  LC AGRLD A +L  +L +KGL  +VV  
Sbjct: 401 GRIEDSDRLLKDLIVSGLFLDSSLYDVMVSSLCWAGRLDEAMKLLQELLEKGLTLSVVAF 460

Query: 475 ------------------TYSIMIH---------------GLCRKGKLEKANDFLLYMEK 501
                              Y IM+                GLCRKG L++A   L  M +
Sbjct: 461 NSLIGAYSRAGLEDKAFEAYRIMVRCGFTPSSSTCNSLLMGLCRKGWLQEARILLYRMLE 520

Query: 502 NGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKY 561
            G   N V +  L+ G+ + N       L  +M   ER + PD   F+ ++D L+K    
Sbjct: 521 KGFPINKVAYTVLLDGYFKMNNLEGAQFLWKEMK--ERGIYPDAVAFTALIDGLSKAGNV 578

Query: 562 HECSAV 567
            E   V
Sbjct: 579 EEAYEV 584


>gi|449446624|ref|XP_004141071.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g06000-like [Cucumis sativus]
          Length = 548

 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 135/452 (29%), Positives = 239/452 (52%), Gaps = 14/452 (3%)

Query: 77  SFNLLFGAVAKNRH----YDAVISFYRKLVSIGLLP---DFLTLNILINCFGNKERGLCV 129
           S N  FG +++N +    ++ +  F   L+ +         L++N   N +    R LC 
Sbjct: 62  SLNACFGYLSRNLNPSIAFEVIKRFSDPLLGLKFFEFSRTHLSINHTFNTYDLLMRNLCK 121

Query: 130 ENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLIS 189
                 A  +F  M + G+ PD      L++ + R G L  A    K  ++  +  G+  
Sbjct: 122 VGLNDSAKIVFDCMRSDGILPDSSILELLVSSYARMGKLDSA----KNFLNEVHCYGI-- 175

Query: 190 KTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNG 249
           K + F Y+ +++ L K+ LVD+A  LF E       P V     LI G C  G  ++   
Sbjct: 176 KVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGLCRIGEIDKAFE 235

Query: 250 LFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLL-ELMIQRGLNPDRFTYNSLMDGY 308
            F  M + G  P+++++N +I+  C+  +I++ + LL E M+ +G++PD  TY S++ GY
Sbjct: 236 FFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYTSIISGY 295

Query: 309 CLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTV 368
           C +G +  A E+F  M S G K    ++N+LI+G+ K+ N+  AM +Y +++  G    V
Sbjct: 296 CKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPDV 355

Query: 369 ITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHM 428
           +T+ +L+ G  + G+     KL++EMK+ N+ P++ TY +LI+ LCK N ++EA      
Sbjct: 356 VTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREARNFLRH 415

Query: 429 LEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGK 488
           L+ ++      I+N +IDG CKAG++D A  +  ++ +K   P  +T++I+I G C KG+
Sbjct: 416 LKSSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILIIGNCMKGR 475

Query: 489 LEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQ 520
           + +A      M +  C P+ +T N+L+   L+
Sbjct: 476 MVEAISTFYKMIEINCVPDEITINSLISCLLK 507



 Score =  184 bits (468), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 115/419 (27%), Positives = 212/419 (50%), Gaps = 9/419 (2%)

Query: 154 TYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAK 213
           TY  L+   C+ G    A  +   M S    +G++  ++I    +++ S  + G +D AK
Sbjct: 111 TYDLLMRNLCKVGLNDSAKIVFDCMRS----DGILPDSSILE--LLVSSYARMGKLDSAK 164

Query: 214 ELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCL 273
               E+   GI  +  V   L++        +E   LF E L+    P++ +FN++I  L
Sbjct: 165 NFLNEVHCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGL 224

Query: 274 CKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFL-SMHSKGCKHT 332
           C+ G+I++A    + M   G  PD  +YN+L++G+C V  I    ++    M  KG    
Sbjct: 225 CRIGEIDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPD 284

Query: 333 VVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFD 392
           V++Y  +I+GYCK+ +++ A  L+ +++S+G++    T+N L+ G  + G    A  +++
Sbjct: 285 VITYTSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYE 344

Query: 393 EMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAG 452
           +M L    PD+ T+  LIDG C+   V + +KL+  +++      +  +  LI+ LCK  
Sbjct: 345 KMLLLGCLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKEN 404

Query: 453 RLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFN 512
           R+  A      L    +VP    Y+ +I G C+ GK+++AN  +  M++  C P+ +TF 
Sbjct: 405 RIREARNFLRHLKSSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFT 464

Query: 513 TLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKSS 571
            L+ G     +  + +   +KM E   N VPD+ T + ++  L K    +E S + +++
Sbjct: 465 ILIIGNCMKGRMVEAISTFYKMIEI--NCVPDEITINSLISCLLKAGMPNEASQIKQAA 521



 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 129/438 (29%), Positives = 208/438 (47%), Gaps = 37/438 (8%)

Query: 60  RYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNIL--- 116
           ++F    TH+  +   ++++LL   + K    D+    +  + S G+LPD   L +L   
Sbjct: 94  KFFEFSRTHLSINHTFNTYDLLMRNLCKVGLNDSAKIVFDCMRSDGILPDSSILELLVSS 153

Query: 117 ----------------INCFGNKERG---------LCVENRIKEATWLFKNMIAFGVRPD 151
                           ++C+G K            L  +N + EA  LF+  +     PD
Sbjct: 154 YARMGKLDSAKNFLNEVHCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPD 213

Query: 152 VITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDK 211
           V ++  LI G CR G +  A    + M  G++  G     +I SY+ +I+  C+   + K
Sbjct: 214 VYSFNILIRGLCRIGEIDKAFEFFQNM--GNF--GCFP--DIVSYNTLINGFCRVNEISK 267

Query: 212 AKELFLE-MKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMI 270
             +L  E M  +G++P V+  T++I G+C  G+ +  + LF EM+  G +PN  TFNV+I
Sbjct: 268 GHDLLKEDMLIKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLI 327

Query: 271 DCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCK 330
           D   K G +  A  + E M+  G  PD  T+ SL+DGYC  G ++   +++  M  +   
Sbjct: 328 DGFGKVGNMRSAMVMYEKMLLLGCLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLS 387

Query: 331 HTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKL 390
             V +Y +LIN  CK   + EA +  R + S+ V      YN ++ G  +AG+   A  +
Sbjct: 388 PNVYTYAVLINALCKENRIREARNFLRHLKSSEVVPKPFIYNPVIDGFCKAGKVDEANFI 447

Query: 391 FDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFH-MLEMNKFEFGIEIFNCLIDGLC 449
             EM+     PD  T+ ILI G C    + EA+  F+ M+E+N     I I N LI  L 
Sbjct: 448 VAEMQEKKCRPDKITFTILIIGNCMKGRMVEAISTFYKMIEINCVPDEITI-NSLISCLL 506

Query: 450 KAGRLDNAWELFHKLPQK 467
           KAG  + A ++     QK
Sbjct: 507 KAGMPNEASQIKQAALQK 524



 Score = 89.0 bits (219), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 59/208 (28%), Positives = 106/208 (50%), Gaps = 8/208 (3%)

Query: 363 GVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEA 422
            +  T  TY+ L+  L + G    A+ +FD M+   + PD S   +L+    +   +  A
Sbjct: 104 SINHTFNTYDLLMRNLCKVGLNDSAKIVFDCMRSDGILPDSSILELLVSSYARMGKLDSA 163

Query: 423 VKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHG 482
               + +     +    ++N L++ L K   +D A  LF +  +   VP V +++I+I G
Sbjct: 164 KNFLNEVHCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRG 223

Query: 483 LCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLV 542
           LCR G+++KA +F   M   GC P++V++NTL++GF + N+ SK  +LL K     + + 
Sbjct: 224 LCRIGEIDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLL-KEDMLIKGVS 282

Query: 543 PDDTTFSIVV-------DLLAKDEKYHE 563
           PD  T++ ++       D+ A  E + E
Sbjct: 283 PDVITYTSIISGYCKLGDMKAASELFDE 310


>gi|326522214|dbj|BAK04235.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 966

 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 139/537 (25%), Positives = 251/537 (46%), Gaps = 62/537 (11%)

Query: 71  PSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILI------------- 117
           PSP +  FN L         Y      + ++ + G  P ++  NI I             
Sbjct: 339 PSPSL--FNSLVHTYCNAEDYAYAYKLFNRMNTCGCPPGYVVYNIFIGSICGREELPNPE 396

Query: 118 ---------------NCFGNK------ERGLCVENRIKEATWLFKNMIAFGVRPDVITYG 156
                          +C  NK       R LC   + ++A  + K M+  G  PD  TY 
Sbjct: 397 LLDLAEKVYEEMLVASCVLNKINTANFARCLCGVGKFEKAFQIVKEMMRKGFVPDASTYT 456

Query: 157 TLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELF 216
            +I   C+   +  A  L ++M        +    ++++Y+I+IDS CK GL+++A+  F
Sbjct: 457 KVITFLCQAKRVDKAFLLFQEM------KKVGVNPDVYTYTILIDSFCKAGLIEQAQSWF 510

Query: 217 LEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKG 276
            EM+  G +P VV  T L+H +  +    + N +F  M+     PN +T++ +ID LCK 
Sbjct: 511 DEMRSAGCSPNVVTYTALLHAYLKSKQLYQANDIFHRMVGDACYPNAITYSALIDGLCKA 570

Query: 277 GKINEANGLLELMIQRG----------------LNPDRFTYNSLMDGYCLVGRIDTAREI 320
           G+I +A  +   +I                   ++P+  TY +L++G C   ++  A ++
Sbjct: 571 GEIQKACEVYAKLIGTSDNIESDFYFEGKDTDTISPNVVTYGALVNGLCKAQKVSDAHDL 630

Query: 321 FLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQ 380
             +M + GC+   + Y+ L++G+CK+  ++ A  ++ ++   G   +V TY +L+  +F+
Sbjct: 631 LDAMLAAGCEPNQIVYDALVDGFCKVGEIDSAQEVFLRMTKCGYLPSVHTYTSLIDRMFK 690

Query: 381 AGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEI 440
            G+   A K+  +M   +  P++ TY  ++DGLCK    ++A+ L  ++E       +  
Sbjct: 691 DGRLDLAMKVLSQMLKDSCNPNVVTYTAMVDGLCKTGETEKALNLLSLMEKKGCSPNVVT 750

Query: 441 FNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYME 500
           +  LIDGL KAG++D   ELF ++  KG  P  VTY I+I+  C  G L+ A+  L  M+
Sbjct: 751 YTALIDGLGKAGKVDAGLELFMQMKTKGCAPNYVTYRILINHCCAAGLLDDAHLLLDEMK 810

Query: 501 KNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAK 557
           +      +  + T + GF +    S  + LL +M     +  P    + +++D  +K
Sbjct: 811 QTHWPKYLQGYRTTVQGFSKRFLAS--LGLLEEM--ESHDTAPIAPVYGMLIDSFSK 863



 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 136/541 (25%), Positives = 235/541 (43%), Gaps = 65/541 (12%)

Query: 48  NCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLL 107
            C  G+    +A      M      P  S++  +   + + +  D     ++++  +G+ 
Sbjct: 425 RCLCGVGKFEKAFQIVKEMMRKGFVPDASTYTKVITFLCQAKRVDKAFLLFQEMKKVGVN 484

Query: 108 PDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGN 167
           PD  T  ILI+ F       C    I++A   F  M + G  P+V+TY  L++ + ++  
Sbjct: 485 PDVYTYTILIDSF-------CKAGLIEQAQSWFDEMRSAGCSPNVVTYTALLHAYLKSKQ 537

Query: 168 LSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRG---- 223
           L  A  +  +MV      G     N  +YS +ID LCK G + KA E++ ++ G      
Sbjct: 538 LYQANDIFHRMV------GDACYPNAITYSALIDGLCKAGEIQKACEVYAKLIGTSDNIE 591

Query: 224 ------------INPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMID 271
                       I+P VV    L++G C A    + + L   ML  G  PN + ++ ++D
Sbjct: 592 SDFYFEGKDTDTISPNVVTYGALVNGLCKAQKVSDAHDLLDAMLAAGCEPNQIVYDALVD 651

Query: 272 CLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKH 331
             CK G+I+ A  +   M + G  P   TY SL+D     GR+D A ++   M    C  
Sbjct: 652 GFCKVGEIDSAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCNP 711

Query: 332 TVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLF 391
            VV+Y  +++G CK    E+A++L   +   G    V+TY  L+ GL +AG+     +LF
Sbjct: 712 NVVTYTAMVDGLCKTGETEKALNLLSLMEKKGCSPNVVTYTALIDGLGKAGKVDAGLELF 771

Query: 392 DEMKLYNVEPDLSTYNILIDGLCK--------------------------NNCVQ----- 420
            +MK     P+  TY ILI+  C                              VQ     
Sbjct: 772 MQMKTKGCAPNYVTYRILINHCCAAGLLDDAHLLLDEMKQTHWPKYLQGYRTTVQGFSKR 831

Query: 421 --EAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVT--- 475
              ++ L   +E +       ++  LID   KAGRL+ A EL  ++ +      + +   
Sbjct: 832 FLASLGLLEEMESHDTAPIAPVYGMLIDSFSKAGRLETALELHKEMMEVSSSLNMASKDM 891

Query: 476 YSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMA 535
           ++ +I  LC   ++E+A      M + G  P++  F  L+ G ++ NK ++ ++L + + 
Sbjct: 892 HTSLIQALCLSSQVEEAVALYSEMRRRGIVPDLSAFVCLVKGLIERNKWNEALQLCYGIC 951

Query: 536 E 536
           +
Sbjct: 952 Q 952



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 133/540 (24%), Positives = 222/540 (41%), Gaps = 110/540 (20%)

Query: 113 LNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVAL 172
           LN+L+       R  C++    EA      +  FG RP  +TY  L+      G + +A 
Sbjct: 172 LNVLV-------RRCCLQGLWGEALEELGRLKDFGYRPSAVTYNALVQVLASAGQVEMAF 224

Query: 173 RLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCT 232
           R+ K+M +  +    + ++ + S++    +LCKEG    A +L LE +   ++   V+CT
Sbjct: 225 RVQKEMSASGF---CMDRSTVGSFA---QALCKEGRWGDALDL-LEREDFKLD--TVLCT 275

Query: 233 TLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQR 292
            +I G   A  + E       M      PN++T+  ++    K  ++     ++ +M+  
Sbjct: 276 QMISGLMEASLFNEAMSFLHRMRCNSYIPNVVTYRTLLTGFLKKKQLGWCKRIINMMMTE 335

Query: 293 GLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCK------- 345
           G NP    +NSL+  YC       A ++F  M++ GC    V YNI I   C        
Sbjct: 336 GCNPSPSLFNSLVHTYCNAEDYAYAYKLFNRMNTCGCPPGYVVYNIFIGSICGREELPNP 395

Query: 346 ------------------ILN----------------VEEAMSLYRQIISNGVRQTVITY 371
                             +LN                 E+A  + ++++  G      TY
Sbjct: 396 ELLDLAEKVYEEMLVASCVLNKINTANFARCLCGVGKFEKAFQIVKEMMRKGFVPDASTY 455

Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFH---- 427
             +++ L QA +   A  LF EMK   V PD+ TY ILID  CK   +++A   F     
Sbjct: 456 TKVITFLCQAKRVDKAFLLFQEMKKVGVNPDVYTYTILIDSFCKAGLIEQAQSWFDEMRS 515

Query: 428 ----------------MLEMNKFEFGIEIFN---------------CLIDGLCKAGRLDN 456
                            L+  +     +IF+                LIDGLCKAG +  
Sbjct: 516 AGCSPNVVTYTALLHAYLKSKQLYQANDIFHRMVGDACYPNAITYSALIDGLCKAGEIQK 575

Query: 457 AWELFHKL----------------PQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYME 500
           A E++ KL                    + P VVTY  +++GLC+  K+  A+D L  M 
Sbjct: 576 ACEVYAKLIGTSDNIESDFYFEGKDTDTISPNVVTYGALVNGLCKAQKVSDAHDLLDAML 635

Query: 501 KNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEK 560
             GC PN + ++ L+ GF +  +     E+  +M +     +P   T++ ++D + KD +
Sbjct: 636 AAGCEPNQIVYDALVDGFCKVGEIDSAQEVFLRMTKC--GYLPSVHTYTSLIDRMFKDGR 693



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 109/468 (23%), Positives = 198/468 (42%), Gaps = 57/468 (12%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CK+G+I   +A+ +F  M     SP + ++  L  A  K++        + ++V     P
Sbjct: 498 CKAGLIE--QAQSWFDEMRSAGCSPNVVTYTALLHAYLKSKQLYQANDIFHRMVGDACYP 555

Query: 109 DFLTLNILIN--------------------------------------------CFGNKE 124
           + +T + LI+                                             +G   
Sbjct: 556 NAITYSALIDGLCKAGEIQKACEVYAKLIGTSDNIESDFYFEGKDTDTISPNVVTYGALV 615

Query: 125 RGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYE 184
            GLC   ++ +A  L   M+A G  P+ I Y  L++GFC+ G +  A  +  +M    Y 
Sbjct: 616 NGLCKAQKVSDAHDLLDAMLAAGCEPNQIVYDALVDGFCKVGEIDSAQEVFLRMTKCGY- 674

Query: 185 NGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNW 244
                  ++ +Y+ +ID + K+G +D A ++  +M     NP VV  T ++ G C  G  
Sbjct: 675 -----LPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCNPNVVTYTAMVDGLCKTGET 729

Query: 245 EEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSL 304
           E+   L   M   G  PN++T+  +ID L K GK++    L   M  +G  P+  TY  L
Sbjct: 730 EKALNLLSLMEKKGCSPNVVTYTALIDGLGKAGKVDAGLELFMQMKTKGCAPNYVTYRIL 789

Query: 305 MDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGV 364
           ++  C  G +D A  +   M        +  Y   + G+ K      ++ L  ++ S+  
Sbjct: 790 INHCCAAGLLDDAHLLLDEMKQTHWPKYLQGYRTTVQGFSK--RFLASLGLLEEMESHDT 847

Query: 365 RQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNI---LIDGLCKNNCVQE 421
                 Y  L+    +AG+   A +L  EM   +   ++++ ++   LI  LC ++ V+E
Sbjct: 848 APIAPVYGMLIDSFSKAGRLETALELHKEMMEVSSSLNMASKDMHTSLIQALCLSSQVEE 907

Query: 422 AVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGL 469
           AV L+  +        +  F CL+ GL +  + + A +L + + Q+G+
Sbjct: 908 AVALYSEMRRRGIVPDLSAFVCLVKGLIERNKWNEALQLCYGICQEGV 955



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 70/266 (26%), Positives = 112/266 (42%), Gaps = 31/266 (11%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CK+G     +A      M     SP + ++  L   + K    DA +  + ++ + G  P
Sbjct: 724 CKTG--ETEKALNLLSLMEKKGCSPNVVTYTALIDGLGKAGKVDAGLELFMQMKTKGCAP 781

Query: 109 DFLTLNILIN---CFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVIT-YGTLINGFCR 164
           +++T  ILIN     G  +    + + +K+  W           P  +  Y T + GF +
Sbjct: 782 NYVTYRILINHCCAAGLLDDAHLLLDEMKQTHW-----------PKYLQGYRTTVQGFSK 830

Query: 165 TGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMK--GR 222
                 +L L ++M S D     I+      Y ++IDS  K G ++ A EL  EM     
Sbjct: 831 --RFLASLGLLEEMESHD--TAPIAPV----YGMLIDSFSKAGRLETALELHKEMMEVSS 882

Query: 223 GINPAVV-VCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINE 281
            +N A   + T+LI   C +   EE   L+ EM   G  P+L  F  ++  L +  K NE
Sbjct: 883 SLNMASKDMHTSLIQALCLSSQVEEAVALYSEMRRRGIVPDLSAFVCLVKGLIERNKWNE 942

Query: 282 ANGLLELMIQRGLNPDRFTYNSLMDG 307
           A  L   + Q G+N   +  N   DG
Sbjct: 943 ALQLCYGICQEGVN---WEGNKFCDG 965


>gi|356529499|ref|XP_003533328.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
           mitochondrial-like [Glycine max]
          Length = 447

 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 131/412 (31%), Positives = 214/412 (51%), Gaps = 42/412 (10%)

Query: 53  IINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLT 112
           I N+++A   F  M  M+ +PPI  FN +  + AK +HY + +S   +L   G+ PD  T
Sbjct: 37  IQNVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHY-STVSLSHRLELKGIQPDLFT 95

Query: 113 LNILINCFGNKE----------------------------RGLCVENRIKEATWLFKNMI 144
           LNILINCF +                              +GLC++ ++K+A      ++
Sbjct: 96  LNILINCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLL 155

Query: 145 AFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLC 204
           A G + + + YGTLING C+ G+   A++L KK+      +G ++K ++  YS IID+LC
Sbjct: 156 AQGFQLNQVGYGTLINGVCKIGDTRAAIKLLKKI------DGRLTKPDVVMYSTIIDALC 209

Query: 205 KEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLL 264
           K  LV +A  LF EM  +GI+  VV   TLI+GFC  G  +E  GL   M+     P++ 
Sbjct: 210 KYQLVSEAYGLFSEMTVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNVMVLKTINPDVY 269

Query: 265 TFNVMIDCLCKGGKINEAN-------GLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTA 317
           T+ +++D LCK GK+ EA         L++ M  RG   D  TY+SL+DG C  G +D A
Sbjct: 270 TYTILVDALCKEGKVKEAKRRISYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRA 329

Query: 318 REIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSG 377
             +F  M  +G +  + ++ IL++G  K   +++A  +++ +++ G    V TYN +++G
Sbjct: 330 IALFNKMKDQGIRPNMFTFTILLDGLWKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMING 389

Query: 378 LFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHML 429
             + G    A  +  +M+     P+  T+  +I  L K +   +A KL   +
Sbjct: 390 HCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFKKDENDKAEKLLRQM 441



 Score =  198 bits (503), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 122/409 (29%), Positives = 201/409 (49%), Gaps = 14/409 (3%)

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
           + +A   F  M+     P +I +  +++ F +  + S     H+  + G        + +
Sbjct: 40  VDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTVSLSHRLELKG-------IQPD 92

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
           +F+ +I+I+  C  G +     +  ++  RG  P+ V   TLI G C  G  ++      
Sbjct: 93  LFTLNILINCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHD 152

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
           ++L  G + N + +  +I+ +CK G    A  LL+ +  R   PD   Y++++D  C   
Sbjct: 153 KLLAQGFQLNQVGYGTLINGVCKIGDTRAAIKLLKKIDGRLTKPDVVMYSTIIDALCKYQ 212

Query: 313 RIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYN 372
            +  A  +F  M  KG    VV+YN LI G+C +  ++EA+ L   ++   +   V TY 
Sbjct: 213 LVSEAYGLFSEMTVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNVMVLKTINPDVYTYT 272

Query: 373 TLLSGLFQAGQA-------GYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKL 425
            L+  L + G+         Y   L DEM+      D+ TY+ LIDGLCKN  +  A+ L
Sbjct: 273 ILVDALCKEGKVKEAKRRISYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIAL 332

Query: 426 FHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCR 485
           F+ ++       +  F  L+DGL K GRL +A E+F  L  KG    V TY++MI+G C+
Sbjct: 333 FNKMKDQGIRPNMFTFTILLDGLWKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCK 392

Query: 486 KGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKM 534
           +G LE+A   L  ME NGC PN  TF T++    + ++  K  +LL +M
Sbjct: 393 QGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFKKDENDKAEKLLRQM 441



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 113/395 (28%), Positives = 185/395 (46%), Gaps = 48/395 (12%)

Query: 209 VDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDL-GPRPNLLTFN 267
           VD A   F  M      P ++    ++  F    ++  V+      L+L G +P+L T N
Sbjct: 40  VDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTVS--LSHRLELKGIQPDLFTLN 97

Query: 268 VMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSK 327
           ++I+C C  G+I     +L  +++RG  P   T N+L+ G CL G++  A      + ++
Sbjct: 98  ILINCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQ 157

Query: 328 GCKHTVVSYNILINGYCKILN-----------------------------------VEEA 352
           G +   V Y  LING CKI +                                   V EA
Sbjct: 158 GFQLNQVGYGTLINGVCKIGDTRAAIKLLKKIDGRLTKPDVVMYSTIIDALCKYQLVSEA 217

Query: 353 MSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDG 412
             L+ ++   G+   V+TYNTL+ G    G+   A  L + M L  + PD+ TY IL+D 
Sbjct: 218 YGLFSEMTVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNVMVLKTINPDVYTYTILVDA 277

Query: 413 LCKNNCVQEAVK-------LFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLP 465
           LCK   V+EA +       L   +        +  ++ LIDGLCK G LD A  LF+K+ 
Sbjct: 278 LCKEGKVKEAKRRISYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMK 337

Query: 466 QKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTS 525
            +G+ P + T++I++ GL + G+L+ A +    +   G   NV T+N +++G  +     
Sbjct: 338 DQGIRPNMFTFTILLDGLWKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLE 397

Query: 526 KVVELLHKMAEPERNLVPDDTTF-SIVVDLLAKDE 559
           + + +L KM   +   +P+  TF +I++ L  KDE
Sbjct: 398 EALTMLSKME--DNGCIPNAFTFETIIIALFKKDE 430



 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 90/294 (30%), Positives = 148/294 (50%), Gaps = 20/294 (6%)

Query: 78  FNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEAT 137
           +  L   V K     A I   +K+      PD +  + +I+        LC    + EA 
Sbjct: 166 YGTLINGVCKIGDTRAAIKLLKKIDGRLTKPDVVMYSTIID-------ALCKYQLVSEAY 218

Query: 138 WLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYS 197
            LF  M   G+  DV+TY TLI GFC  G L  A+ L   MV            ++++Y+
Sbjct: 219 GLFSEMTVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNVMVLKTIN------PDVYTYT 272

Query: 198 IIIDSLCKEGLVDKAK-------ELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGL 250
           I++D+LCKEG V +AK       +L  EM+ RG    V+  ++LI G C  G+ +    L
Sbjct: 273 ILVDALCKEGKVKEAKRRISYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIAL 332

Query: 251 FIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCL 310
           F +M D G RPN+ TF +++D L KGG++ +A  + + ++ +G + + +TYN +++G+C 
Sbjct: 333 FNKMKDQGIRPNMFTFTILLDGLWKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCK 392

Query: 311 VGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGV 364
            G ++ A  +   M   GC     ++  +I    K    ++A  L RQ+I+ G+
Sbjct: 393 QGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFKKDENDKAEKLLRQMIARGL 446


>gi|449488099|ref|XP_004157939.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g06000-like [Cucumis sativus]
          Length = 548

 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 135/452 (29%), Positives = 239/452 (52%), Gaps = 14/452 (3%)

Query: 77  SFNLLFGAVAKNRH----YDAVISFYRKLVSIGLLP---DFLTLNILINCFGNKERGLCV 129
           S N  FG +++N +    ++ +  F   L+ +         L++N   N +    R LC 
Sbjct: 62  SLNACFGYLSRNLNPSIAFEVIKRFSDPLLGLKFFEFSRTHLSINHTFNTYDLLMRNLCK 121

Query: 130 ENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLIS 189
                 A  +F  M + G+ PD      L++ + R G L  A    K  ++  +  G+  
Sbjct: 122 VGLNDSAKIVFDCMRSDGILPDSSILELLVSSYARMGKLDSA----KNFLNEVHCYGI-- 175

Query: 190 KTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNG 249
           K + F Y+ +++ L K+ LVD+A  LF E       P V     LI G C  G  ++   
Sbjct: 176 KVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGLCRIGEIDKAFE 235

Query: 250 LFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLL-ELMIQRGLNPDRFTYNSLMDGY 308
            F  M + G  P+++++N +I+  C+  +I++ + LL E M+ +G++PD  TY S++ GY
Sbjct: 236 FFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYTSIISGY 295

Query: 309 CLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTV 368
           C +G +  A E+F  M S G K    ++N+LI+G+ K+ N+  AM +Y +++  G    V
Sbjct: 296 CKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPDV 355

Query: 369 ITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHM 428
           +T+ +L+ G  + G+     KL++EMK+ N+ P++ TY +LI+ LCK N ++EA      
Sbjct: 356 VTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREARNFLRH 415

Query: 429 LEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGK 488
           L+ ++      I+N +IDG CKAG++D A  +  ++ +K   P  +T++I+I G C KG+
Sbjct: 416 LKSSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILIIGNCMKGR 475

Query: 489 LEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQ 520
           + +A      M +  C P+ +T N+L+   L+
Sbjct: 476 MVEAISTFYKMIEINCVPDEITINSLISCLLK 507



 Score =  184 bits (468), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 115/419 (27%), Positives = 212/419 (50%), Gaps = 9/419 (2%)

Query: 154 TYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAK 213
           TY  L+   C+ G    A  +   M S    +G++  ++I    +++ S  + G +D AK
Sbjct: 111 TYDLLMRNLCKVGLNDSAKIVFDCMRS----DGILPDSSILE--LLVSSYARMGKLDSAK 164

Query: 214 ELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCL 273
               E+   GI  +  V   L++        +E   LF E L+    P++ +FN++I  L
Sbjct: 165 NFLNEVHCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGL 224

Query: 274 CKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFL-SMHSKGCKHT 332
           C+ G+I++A    + M   G  PD  +YN+L++G+C V  I    ++    M  KG    
Sbjct: 225 CRIGEIDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPD 284

Query: 333 VVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFD 392
           V++Y  +I+GYCK+ +++ A  L+ +++S+G++    T+N L+ G  + G    A  +++
Sbjct: 285 VITYTSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYE 344

Query: 393 EMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAG 452
           +M L    PD+ T+  LIDG C+   V + +KL+  +++      +  +  LI+ LCK  
Sbjct: 345 KMLLLGCLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKEN 404

Query: 453 RLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFN 512
           R+  A      L    +VP    Y+ +I G C+ GK+++AN  +  M++  C P+ +TF 
Sbjct: 405 RIREARNFLRHLKSSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFT 464

Query: 513 TLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKSS 571
            L+ G     +  + +   +KM E   N VPD+ T + ++  L K    +E S + +++
Sbjct: 465 ILIIGNCMKGRMVEAISTFYKMIEI--NCVPDEITINSLISCLLKAGMPNEASQIKQAA 521



 Score =  171 bits (434), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 129/438 (29%), Positives = 208/438 (47%), Gaps = 37/438 (8%)

Query: 60  RYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNIL--- 116
           ++F    TH+  +   ++++LL   + K    D+    +  + S G+LPD   L +L   
Sbjct: 94  KFFEFSRTHLSINHTFNTYDLLMRNLCKVGLNDSAKIVFDCMRSDGILPDSSILELLVSS 153

Query: 117 ----------------INCFGNKERG---------LCVENRIKEATWLFKNMIAFGVRPD 151
                           ++C+G K            L  +N + EA  LF+  +     PD
Sbjct: 154 YARMGKLDSAKNFLNEVHCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPD 213

Query: 152 VITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDK 211
           V ++  LI G CR G +  A    + M  G++  G     +I SY+ +I+  C+   + K
Sbjct: 214 VYSFNILIRGLCRIGEIDKAFEFFQNM--GNF--GCFP--DIVSYNTLINGFCRVNEISK 267

Query: 212 AKELFLE-MKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMI 270
             +L  E M  +G++P V+  T++I G+C  G+ +  + LF EM+  G +PN  TFNV+I
Sbjct: 268 GHDLLKEDMLIKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLI 327

Query: 271 DCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCK 330
           D   K G +  A  + E M+  G  PD  T+ SL+DGYC  G ++   +++  M  +   
Sbjct: 328 DGFGKVGNMRSAMVMYEKMLLLGCLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLS 387

Query: 331 HTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKL 390
             V +Y +LIN  CK   + EA +  R + S+ V      YN ++ G  +AG+   A  +
Sbjct: 388 PNVYTYAVLINALCKENRIREARNFLRHLKSSEVVPKPFIYNPVIDGFCKAGKVDEANFI 447

Query: 391 FDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFH-MLEMNKFEFGIEIFNCLIDGLC 449
             EM+     PD  T+ ILI G C    + EA+  F+ M+E+N     I I N LI  L 
Sbjct: 448 VAEMQEKKCRPDKITFTILIIGNCMKGRMVEAISTFYKMIEINCVPDEITI-NSLISCLL 506

Query: 450 KAGRLDNAWELFHKLPQK 467
           KAG  + A ++     QK
Sbjct: 507 KAGMPNEASQIKQAALQK 524



 Score = 89.0 bits (219), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 59/208 (28%), Positives = 106/208 (50%), Gaps = 8/208 (3%)

Query: 363 GVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEA 422
            +  T  TY+ L+  L + G    A+ +FD M+   + PD S   +L+    +   +  A
Sbjct: 104 SINHTFNTYDLLMRNLCKVGLNDSAKIVFDCMRSDGILPDSSILELLVSSYARMGKLDSA 163

Query: 423 VKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHG 482
               + +     +    ++N L++ L K   +D A  LF +  +   VP V +++I+I G
Sbjct: 164 KNFLNEVHCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRG 223

Query: 483 LCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLV 542
           LCR G+++KA +F   M   GC P++V++NTL++GF + N+ SK  +LL K     + + 
Sbjct: 224 LCRIGEIDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLL-KEDMLIKGVS 282

Query: 543 PDDTTFSIVV-------DLLAKDEKYHE 563
           PD  T++ ++       D+ A  E + E
Sbjct: 283 PDVITYTSIISGYCKLGDMKAASELFDE 310


>gi|15218284|ref|NP_172453.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75276860|sp|O04504.1|PPR27_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09820
 gi|2160173|gb|AAB60736.1| Similar to N. tabacum salt-inducible protein (gb|U08285)
           [Arabidopsis thaliana]
 gi|332190378|gb|AEE28499.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 606

 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 127/393 (32%), Positives = 214/393 (54%), Gaps = 17/393 (4%)

Query: 126 GLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKM-VSGDYE 184
            L  ENR  +  +++K MI   ++P+V T+  +IN  C+TG ++ A  + + M V G   
Sbjct: 197 ALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYG--- 253

Query: 185 NGLISKTNIFSYSIIIDSLCK---EGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCA 241
                  N+ SY+ +ID  CK    G + KA  +  EM    ++P +     LI GF   
Sbjct: 254 ----CSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKD 309

Query: 242 GNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTY 301
            N      +F EMLD   +PN++++N +I+ LC GGKI+EA  + + M+  G+ P+  TY
Sbjct: 310 DNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITY 369

Query: 302 NSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIIS 361
           N+L++G+C    +  A ++F S+  +G   T   YN+LI+ YCK+  +++  +L  ++  
Sbjct: 370 NALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMER 429

Query: 362 NGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQE 421
            G+   V TYN L++GL + G    A+KLFD++    + PDL T++IL++G C+    ++
Sbjct: 430 EGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRK 488

Query: 422 AVKLFHMLEMNKFEFGIE--IFNCLIDGLCKAGRLDNAWELFHKL-PQKGLVPTVVTYSI 478
           A  L    EM+K         +N ++ G CK G L  A  +  ++  ++ L   V +Y++
Sbjct: 489 AAMLLK--EMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNV 546

Query: 479 MIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTF 511
           ++ G  +KGKLE AN  L  M + G  PN +T+
Sbjct: 547 LLQGYSQKGKLEDANMLLNEMLEKGLVPNRITY 579



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 122/430 (28%), Positives = 221/430 (51%), Gaps = 24/430 (5%)

Query: 62  FFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFG 121
           ++GY        P     L+   + +NR  D V   Y++++   + P+  T N++IN   
Sbjct: 181 YYGYKLSALSCKP-----LMIALLKENRSAD-VEYVYKEMIRRKIQPNVFTFNVVIN--- 231

Query: 122 NKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCR---TGNLSVALRLHKKM 178
                LC   ++ +A  + ++M  +G  P+V++Y TLI+G+C+    G +  A  + K+M
Sbjct: 232 ----ALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEM 287

Query: 179 VSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGF 238
           V  D         N+ +++I+ID   K+  +  + ++F EM  + + P V+   +LI+G 
Sbjct: 288 VENDVS------PNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGL 341

Query: 239 CCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDR 298
           C  G   E   +  +M+  G +PNL+T+N +I+  CK   + EA  +   +  +G  P  
Sbjct: 342 CNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTT 401

Query: 299 FTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQ 358
             YN L+D YC +G+ID    +   M  +G    V +YN LI G C+  N+E A  L+ Q
Sbjct: 402 RMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQ 461

Query: 359 IISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNC 418
           + S G+   ++T++ L+ G  + G++  A  L  EM    ++P   TYNI++ G CK   
Sbjct: 462 LTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGN 520

Query: 419 VQEAVKLFHMLEMNK-FEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYS 477
           ++ A  +   +E  +     +  +N L+ G  + G+L++A  L +++ +KGLVP  +TY 
Sbjct: 521 LKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYE 580

Query: 478 IMIHGLCRKG 487
           I+   +  +G
Sbjct: 581 IVKEEMVDQG 590



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 124/416 (29%), Positives = 213/416 (51%), Gaps = 44/416 (10%)

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGR----GINPAVVVCTTLIHGFCCAGNWEEV 247
           N+   SII D L      +   EL  E   R    G   + + C  L+          +V
Sbjct: 148 NVCVNSIIADMLVLAYANNSRFELGFEAFKRSGYYGYKLSALSCKPLMIALLKENRSADV 207

Query: 248 NGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDG 307
             ++ EM+    +PN+ TFNV+I+ LCK GK+N+A  ++E M   G +P+  +YN+L+DG
Sbjct: 208 EYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDG 267

Query: 308 YCLVG---RIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGV 364
           YC +G   ++  A  +   M        + ++NILI+G+ K  N+  +M ++++++   V
Sbjct: 268 YCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDV 327

Query: 365 RQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVK 424
           +  VI+YN+L++GL   G+   A  + D+M    V+P+L TYN LI+G CKN+ ++EA+ 
Sbjct: 328 KPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALD 387

Query: 425 LF---------------HML-----EMNKFEFGIEI---------------FNCLIDGLC 449
           +F               +ML     ++ K + G  +               +NCLI GLC
Sbjct: 388 MFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLC 447

Query: 450 KAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVV 509
           + G ++ A +LF +L  KGL P +VT+ I++ G CRKG+  KA   L  M K G  P  +
Sbjct: 448 RNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHL 506

Query: 510 TFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECS 565
           T+N +M G+ +         +  +M E ER L  +  ++++++   ++  K  + +
Sbjct: 507 TYNIVMKGYCKEGNLKAATNMRTQM-EKERRLRMNVASYNVLLQGYSQKGKLEDAN 561



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 116/368 (31%), Positives = 186/368 (50%), Gaps = 26/368 (7%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLL------FGAVAKNRHYDAVISFYRKLV 102
           CK+G   +N+AR     M     SP + S+N L       G   K    DAV+   +++V
Sbjct: 234 CKTG--KMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVL---KEMV 288

Query: 103 SIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGF 162
              + P+  T NILI+       G   ++ +  +  +FK M+   V+P+VI+Y +LING 
Sbjct: 289 ENDVSPNLTTFNILID-------GFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGL 341

Query: 163 CRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGR 222
           C  G +S A+ +  KMVS   +       N+ +Y+ +I+  CK  ++ +A ++F  +KG+
Sbjct: 342 CNGGKISEAISMRDKMVSAGVQ------PNLITYNALINGFCKNDMLKEALDMFGSVKGQ 395

Query: 223 GINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEA 282
           G  P   +   LI  +C  G  ++   L  EM   G  P++ T+N +I  LC+ G I  A
Sbjct: 396 GAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAA 455

Query: 283 NGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILING 342
             L + +  +GL PD  T++ LM+GYC  G    A  +   M   G K   ++YNI++ G
Sbjct: 456 KKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKG 514

Query: 343 YCKILNVEEAMSLYRQI-ISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEP 401
           YCK  N++ A ++  Q+     +R  V +YN LL G  Q G+   A  L +EM    + P
Sbjct: 515 YCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVP 574

Query: 402 DLSTYNIL 409
           +  TY I+
Sbjct: 575 NRITYEIV 582



 Score = 88.6 bits (218), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 73/256 (28%), Positives = 116/256 (45%), Gaps = 17/256 (6%)

Query: 32  AAVSSPETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHY 91
           A V       N  ++  CK+ +  L EA   FG +      P    +N+L  A  K    
Sbjct: 360 AGVQPNLITYNALINGFCKNDM--LKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKI 417

Query: 92  DAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPD 151
           D   +   ++   G++PD  T N LI        GLC    I+ A  LF  + + G+ PD
Sbjct: 418 DDGFALKEEMEREGIVPDVGTYNCLI-------AGLCRNGNIEAAKKLFDQLTSKGL-PD 469

Query: 152 VITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDK 211
           ++T+  L+ G+CR G    A  L K+M     + GL  K    +Y+I++   CKEG +  
Sbjct: 470 LVTFHILMEGYCRKGESRKAAMLLKEMS----KMGL--KPRHLTYNIVMKGYCKEGNLKA 523

Query: 212 AKELFLEM-KGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMI 270
           A  +  +M K R +   V     L+ G+   G  E+ N L  EML+ G  PN +T+ ++ 
Sbjct: 524 ATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIVK 583

Query: 271 DCLCKGGKINEANGLL 286
           + +   G + +  G L
Sbjct: 584 EEMVDQGFVPDIEGHL 599


>gi|147803305|emb|CAN75473.1| hypothetical protein VITISV_002797 [Vitis vinifera]
          Length = 1356

 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 164/587 (27%), Positives = 248/587 (42%), Gaps = 121/587 (20%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
           P + + N++  ++ K++  + V S +R++   G+ P+  T NILIN       GLCVE  
Sbjct: 196 PSVYTCNMILASMVKDKRTELVWSLFREMSDKGICPNVGTFNILIN-------GLCVEGN 248

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
           +K+A  L K M   G  P ++TY TL+N +C+ G    A+ L   M+    E       +
Sbjct: 249 LKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMICKGIE------AD 302

Query: 193 IFSYSIIIDSLC-----------------------------------KEGLVDKAKELFL 217
           + +Y++ ID+LC                                   KEG +  A ++F 
Sbjct: 303 VCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQVFN 362

Query: 218 EMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTF----------- 266
           EM    ++P  V    LI G C  G++EE   L   M   G R N +T+           
Sbjct: 363 EMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLLNGLCKHE 422

Query: 267 ------------------------NVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYN 302
                                    V+ID LCK G ++EA  L+  M + G+NPD  TY+
Sbjct: 423 KFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYS 482

Query: 303 SLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISN 362
           SL++G+C VG I +A+EI   M+  G     + Y+ LI  +C+  NV EAM +Y  +  N
Sbjct: 483 SLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCN 542

Query: 363 GVRQTVITYNTLLSGLFQAGQAGYAQKL-------------------------------- 390
           G      T N L+S L + G+ G A+K                                 
Sbjct: 543 GHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNA 602

Query: 391 ---FDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDG 447
              FD+M      P   TY  L+ GLCK   + EA K  + L          ++N L+  
Sbjct: 603 FSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAE 662

Query: 448 LCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKAN-DFLLYMEKNGCAP 506
            CK+G L  A  LF K+ Q  ++P   TYS ++ GLCRKGK   A   F   M +    P
Sbjct: 663 TCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFP 722

Query: 507 NVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
           N V +  L+ G  +            +M   ++   PD   F+ ++D
Sbjct: 723 NHVMYTCLVDGLSKAGHPKAAFYFFEEMM--KKGTCPDTVAFNAIID 767



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 131/478 (27%), Positives = 235/478 (49%), Gaps = 17/478 (3%)

Query: 85  VAKNRHYDAVISFYRKLVSIG---------LLPDFLTLNILINCFGNKERGLCVENRIKE 135
           + K R YD+  S  R L  +G         L+  +   N + + F    R    E  I  
Sbjct: 122 LVKARMYDSAKSILRHLCQMGIGSKSIFGALMDTYPLCNSIPSVFDLLIRVYLKEGMIDY 181

Query: 136 ATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFS 195
           A   F+ +   G +P V T   ++    +     +   L ++M     + G+    N+ +
Sbjct: 182 AVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFREMS----DKGICP--NVGT 235

Query: 196 YSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEML 255
           ++I+I+ LC EG + KA  L  +M+  G  P +V   TL++ +C  G ++    L   M+
Sbjct: 236 FNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMI 295

Query: 256 DLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRID 315
             G   ++ T+NV ID LC   +  +A  LL+ M +  ++P+  TYN+L++G+   G+I 
Sbjct: 296 CKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIG 355

Query: 316 TAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLL 375
            A ++F  M         V+YN LI G+C + + EEA+ L   + + G+R   +TY TLL
Sbjct: 356 VAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLL 415

Query: 376 SGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFE 435
           +GL +  +   A++L + M++ ++      Y +LIDGLCKN  + EAV+L   +  +   
Sbjct: 416 NGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVN 475

Query: 436 FGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDF 495
             +  ++ LI+G C+ G + +A E+  ++ + GLV   + YS +I+  C+ G + +A   
Sbjct: 476 PDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMKV 535

Query: 496 LLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
              M  NG   +  T N L+    ++ K  +  + L  M+     LVP+  T+  +++
Sbjct: 536 YAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRI--GLVPNSITYDCIIN 591



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 130/495 (26%), Positives = 216/495 (43%), Gaps = 14/495 (2%)

Query: 62   FFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFG 121
            FF  M      P   ++  L   + K  +      F  +L  I    D +  N L+    
Sbjct: 605  FFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLL---- 660

Query: 122  NKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSG 181
                  C    + EA  LF  M+   V PD  TY +L+ G CR G    A+ L    +  
Sbjct: 661  ---AETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMG- 716

Query: 182  DYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCA 241
                G +   ++  Y+ ++D L K G    A   F EM  +G  P  V    +I      
Sbjct: 717  ---RGTLFPNHVM-YTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRR 772

Query: 242  GNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTY 301
            G   + N  F  M   G  PNL T+N+++    K   +     L   M++ G+ PD+ T+
Sbjct: 773  GQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTF 832

Query: 302  NSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIIS 361
            +SL+ G    G  D   ++   M  +G      ++NILIN Y +   + +A  L   + +
Sbjct: 833  HSLILGLSKSGIPDLGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNT 892

Query: 362  NGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQE 421
             GV     TYN + +GL +      +  +  EM    V P  + Y  LI+G+C+   +Q 
Sbjct: 893  LGVFPDRDTYNHIFNGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQG 952

Query: 422  AVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIH 481
            A KL   +E   F       + ++ GL   G+ ++A  +   + +  L+PT+ T++ ++H
Sbjct: 953  AFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMH 1012

Query: 482  GLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNL 541
              CR  K+ +A      ME  G   +VV +N L+ G   N  ++   EL  +M    R+L
Sbjct: 1013 RFCRDAKIAEALKLKGVMELCGLKLDVVAYNVLIMGMCANGDSAAAFELYEEMR--HRDL 1070

Query: 542  VPDDTTFSIVVDLLA 556
             P+ TT++++VD ++
Sbjct: 1071 CPNITTYAVLVDAIS 1085



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 120/491 (24%), Positives = 219/491 (44%), Gaps = 51/491 (10%)

Query: 49   CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
            CK G  NL EA+ F   + ++  +     +N L     K+ +    ++ + K+V   +LP
Sbjct: 629  CKGG--NLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLP 686

Query: 109  DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFG-VRPDVITYGTLINGFCRTGN 167
            D  T + L+        GLC + +   A  LF   +  G + P+ + Y  L++G  + G+
Sbjct: 687  DSYTYSSLLT-------GLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGH 739

Query: 168  LSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPA 227
               A    ++M+    + G    T   +++ IIDS  + G + KA + F  M+  G+ P 
Sbjct: 740  PKAAFYFFEEMM----KKGTCPDT--VAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPN 793

Query: 228  VVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLE 287
            +     L+HGF           L+  M+  G  P+ LTF+ +I  L K G  +    LL 
Sbjct: 794  LATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLG 853

Query: 288  LMIQRGLNPDRFTYNSLMDGYCLVGRI-------------------DTAREIFLSMHSKG 328
             MI  G   D+FT+N L++ Y   G++                   DT   IF  ++ K 
Sbjct: 854  KMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKS 913

Query: 329  C--KHTVV--------------SYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYN 372
               + TVV               Y  LING C++ +++ A  L  ++ + G     +  +
Sbjct: 914  AFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAES 973

Query: 373  TLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMN 432
             ++ GL   G+   A  + D M    + P ++T+  L+   C++  + EA+KL  ++E+ 
Sbjct: 974  AMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVMELC 1033

Query: 433  KFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKA 492
              +  +  +N LI G+C  G    A+EL+ ++  + L P + TY++++  +     L + 
Sbjct: 1034 GLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLVDAISAANNLIQG 1093

Query: 493  NDFLLYMEKNG 503
               L  +++ G
Sbjct: 1094 EKLLTDLQERG 1104


>gi|356519743|ref|XP_003528529.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g11690-like [Glycine max]
          Length = 556

 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 138/474 (29%), Positives = 240/474 (50%), Gaps = 20/474 (4%)

Query: 38  ETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISF 97
           +T +N ++H +      + ++A  F  +M H    P  ++FN L   + ++ ++D     
Sbjct: 93  DTVVNAYVHSH------STDQALTFLHHMIHEGHVPLSNTFNNLLCLLIRSNYFDKAWWI 146

Query: 98  YRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGT 157
           + +L S  +L  +         FG   +G C      +   L   +  FG+ P+V+ Y T
Sbjct: 147 FNELKSKVVLDAY--------SFGIMIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTT 198

Query: 158 LINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFL 217
           LI+G C+ GN+ +A  L  KM      N L    N  +YS++++   K+GL  +  +++ 
Sbjct: 199 LIDGCCKDGNVMLAKNLFCKM------NRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYE 252

Query: 218 EMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGG 277
            MK  GI P       LI  +C  G  ++   +F EM + G    ++T+N++I  LC+G 
Sbjct: 253 NMKRSGIVPNAYAYNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGK 312

Query: 278 KINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYN 337
           K  EA  L+  + + GL+P+  TYN L++G+C V ++D+A  +F  + S G   T+V+YN
Sbjct: 313 KFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVRKMDSAVRLFNQLKSSGLSPTLVTYN 372

Query: 338 ILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLY 397
            LI GY K+ N+  A+ L +++    +  + +TY  L+    +      A ++   M+  
Sbjct: 373 TLIAGYSKVENLAGALDLVKEMEERCIAPSKVTYTILIDAFARLNHTEKACEMHSLMEKS 432

Query: 398 NVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNA 457
            + PD+ TY++L+ GLC +  ++EA KLF  L     +    I+N +I G CK G    A
Sbjct: 433 GLVPDVYTYSVLLHGLCVHGNMKEASKLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRA 492

Query: 458 WELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTF 511
             L +++ Q G+VP V ++   I  LCR  K ++A   L  M  +G  P+V  +
Sbjct: 493 LRLLNEMVQSGMVPNVASFCSTIGLLCRDEKWKEAELLLGQMINSGLKPSVSLY 546



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 122/381 (32%), Positives = 199/381 (52%), Gaps = 4/381 (1%)

Query: 185 NGLISKT--NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAG 242
           N L SK   + +S+ I+I   C+ G   K   L   ++  G++P VV+ TTLI G C  G
Sbjct: 148 NELKSKVVLDAYSFGIMIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTTLIDGCCKDG 207

Query: 243 NWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYN 302
           N      LF +M  LG  PN  T++V+++   K G   E   + E M + G+ P+ + YN
Sbjct: 208 NVMLAKNLFCKMNRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNAYAYN 267

Query: 303 SLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISN 362
            L+  YC  G +D A ++F  M  KG    V++YNILI G C+     EA+ L  ++   
Sbjct: 268 CLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKV 327

Query: 363 GVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEA 422
           G+   ++TYN L++G     +   A +LF+++K   + P L TYN LI G  K   +  A
Sbjct: 328 GLSPNIVTYNILINGFCDVRKMDSAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGA 387

Query: 423 VKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHG 482
           + L   +E          +  LID   +    + A E+   + + GLVP V TYS+++HG
Sbjct: 388 LDLVKEMEERCIAPSKVTYTILIDAFARLNHTEKACEMHSLMEKSGLVPDVYTYSVLLHG 447

Query: 483 LCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLV 542
           LC  G +++A+     + +    PN V +NT++HG+ +   + + + LL++M   +  +V
Sbjct: 448 LCVHGNMKEASKLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMV--QSGMV 505

Query: 543 PDDTTFSIVVDLLAKDEKYHE 563
           P+  +F   + LL +DEK+ E
Sbjct: 506 PNVASFCSTIGLLCRDEKWKE 526



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 137/462 (29%), Positives = 223/462 (48%), Gaps = 19/462 (4%)

Query: 74  PISSFNLLFGAVA----KNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCV 129
           P S++  L+  V      +   D  ++F   ++  G +P       L N F N    L  
Sbjct: 84  PCSTYTPLYDTVVNAYVHSHSTDQALTFLHHMIHEGHVP-------LSNTFNNLLCLLIR 136

Query: 130 ENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLIS 189
            N   +A W+F N +   V  D  ++G +I G C  G      RL   +     E GL  
Sbjct: 137 SNYFDKAWWIF-NELKSKVVLDAYSFGIMIKGCCEAGYFVKGFRLLAML----EEFGL-- 189

Query: 190 KTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNG 249
             N+  Y+ +ID  CK+G V  AK LF +M   G+ P     + L++GF   G   E   
Sbjct: 190 SPNVVIYTTLIDGCCKDGNVMLAKNLFCKMNRLGLVPNPHTYSVLMNGFFKQGLQREGFQ 249

Query: 250 LFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYC 309
           ++  M   G  PN   +N +I   C  G +++A  +   M ++G+     TYN L+ G C
Sbjct: 250 MYENMKRSGIVPNAYAYNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLC 309

Query: 310 LVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVI 369
              +   A ++   ++  G    +V+YNILING+C +  ++ A+ L+ Q+ S+G+  T++
Sbjct: 310 RGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVRKMDSAVRLFNQLKSSGLSPTLV 369

Query: 370 TYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHML 429
           TYNTL++G  +      A  L  EM+   + P   TY ILID   + N  ++A ++  ++
Sbjct: 370 TYNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVTYTILIDAFARLNHTEKACEMHSLM 429

Query: 430 EMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKL 489
           E +     +  ++ L+ GLC  G +  A +LF  L +  L P  V Y+ MIHG C++G  
Sbjct: 430 EKSGLVPDVYTYSVLLHGLCVHGNMKEASKLFKSLGEMHLQPNSVIYNTMIHGYCKEGSS 489

Query: 490 EKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELL 531
            +A   L  M ++G  PNV +F + + G L  ++  K  ELL
Sbjct: 490 YRALRLLNEMVQSGMVPNVASFCSTI-GLLCRDEKWKEAELL 530



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 69/257 (26%), Positives = 125/257 (48%), Gaps = 12/257 (4%)

Query: 312 GRIDTAREIFLSM-HSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVIT 370
           GRI ++  + L+  H   C      Y+ ++N Y    + ++A++    +I  G      T
Sbjct: 67  GRIPSSLMLQLTQAHFTPCSTYTPLYDTVVNAYVHSHSTDQALTFLHHMIHEGHVPLSNT 126

Query: 371 YNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLE 430
           +N LL  L ++     A  +F+E+K   V  D  ++ I+I G C+     +  +L  MLE
Sbjct: 127 FNNLLCLLIRSNYFDKAWWIFNELK-SKVVLDAYSFGIMIKGCCEAGYFVKGFRLLAMLE 185

Query: 431 MNKFEFGIE----IFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRK 486
               EFG+     I+  LIDG CK G +  A  LF K+ + GLVP   TYS++++G  ++
Sbjct: 186 ----EFGLSPNVVIYTTLIDGCCKDGNVMLAKNLFCKMNRLGLVPNPHTYSVLMNGFFKQ 241

Query: 487 GKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDT 546
           G   +       M+++G  PN   +N L+  +  +    K  ++  +M   E+ +     
Sbjct: 242 GLQREGFQMYENMKRSGIVPNAYAYNCLISEYCNDGMVDKAFKVFAEMR--EKGIACGVM 299

Query: 547 TFSIVVDLLAKDEKYHE 563
           T++I++  L + +K+ E
Sbjct: 300 TYNILIGGLCRGKKFGE 316


>gi|356561683|ref|XP_003549109.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
           mitochondrial-like [Glycine max]
          Length = 445

 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 131/392 (33%), Positives = 193/392 (49%), Gaps = 34/392 (8%)

Query: 63  FGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGN 122
           F  M  M+P PP   FN +  ++ KN+ Y  VIS +++    G+ PD  TL+ILINCF +
Sbjct: 49  FNRMLLMRPPPPTFLFNNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSILINCFCH 108

Query: 123 KE----------------------------RGLCVENRIKEATWLFKNMIAFGVRPDVIT 154
                                         +GLC    IK A      ++A G + D ++
Sbjct: 109 LTHITFAFSVFANILKRGYHPNAITLNTLIKGLCFCGEIKRALHFHDKVVAQGFQLDQVS 168

Query: 155 YGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKE 214
           YGTLING C+ G      RL +K+       G   K ++  Y+ II  LCK  L+  A +
Sbjct: 169 YGTLINGLCKAGETKAVARLLRKL------EGHSVKPDLVMYTTIIHCLCKNKLLGDACD 222

Query: 215 LFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLC 274
           L+ EM  +GI+P V   TTLIHGFC  GN +E   L  EM      P++ TFN++ID L 
Sbjct: 223 LYSEMIVKGISPNVFTYTTLIHGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALA 282

Query: 275 KGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVV 334
           K GKI+EA  L E M  + + P+  TY SL+DG C    ++ A  +   M  +G +  V 
Sbjct: 283 KEGKIDEAMSLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPNVY 342

Query: 335 SYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEM 394
           SY IL++  CK   +E A   ++ ++  G    V TYN +++GL +AG  G    L  +M
Sbjct: 343 SYTILLDALCKGGRLENAKQFFQHLLVKGYHLNVRTYNVMINGLCKAGLFGDVMDLKSKM 402

Query: 395 KLYNVEPDLSTYNILIDGLCKNNCVQEAVKLF 426
           +     P+  T+  +I  L + +   +A K  
Sbjct: 403 EGKGCMPNAITFKTIICALLEKDENDKAEKFL 434



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 135/443 (30%), Positives = 208/443 (46%), Gaps = 49/443 (11%)

Query: 92  DAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPD 151
           DAV SF R L+     P FL  NIL +   NK        R      LFK     G+ PD
Sbjct: 44  DAVASFNRMLLMRPPPPTFLFNNILSSLVKNK--------RYPTVISLFKQFEPNGITPD 95

Query: 152 VITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDK 211
           + T   LIN FC   +++ A  +   ++   Y        N  + + +I  LC  G + +
Sbjct: 96  LCTLSILINCFCHLTHITFAFSVFANILKRGYH------PNAITLNTLIKGLCFCGEIKR 149

Query: 212 AKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMID 271
           A     ++  +G     V   TLI+G C AG  + V  L  ++     +P+L+ +  +I 
Sbjct: 150 ALHFHDKVVAQGFQLDQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDLVMYTTIIH 209

Query: 272 CLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKH 331
           CLCK   + +A  L   MI +G++P+ FT                               
Sbjct: 210 CLCKNKLLGDACDLYSEMIVKGISPNVFT------------------------------- 238

Query: 332 TVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLF 391
               Y  LI+G+C + N++EA SL  ++    +   V T+N L+  L + G+   A  LF
Sbjct: 239 ----YTTLIHGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALAKEGKIDEAMSLF 294

Query: 392 DEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKA 451
           +EMK  N+ P++ TY  LIDGLCKN+ ++ A+ L   ++    +  +  +  L+D LCK 
Sbjct: 295 EEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPNVYSYTILLDALCKG 354

Query: 452 GRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTF 511
           GRL+NA + F  L  KG    V TY++MI+GLC+ G      D    ME  GC PN +TF
Sbjct: 355 GRLENAKQFFQHLLVKGYHLNVRTYNVMINGLCKAGLFGDVMDLKSKMEGKGCMPNAITF 414

Query: 512 NTLMHGFLQNNKTSKVVELLHKM 534
            T++   L+ ++  K  + L +M
Sbjct: 415 KTIICALLEKDENDKAEKFLREM 437



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 82/307 (26%), Positives = 159/307 (51%), Gaps = 2/307 (0%)

Query: 251 FIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCL 310
           F  ML + P P    FN ++  L K  +      L +     G+ PD  T + L++ +C 
Sbjct: 49  FNRMLLMRPPPPTFLFNNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSILINCFCH 108

Query: 311 VGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVIT 370
           +  I  A  +F ++  +G     ++ N LI G C    ++ A+  + ++++ G +   ++
Sbjct: 109 LTHITFAFSVFANILKRGYHPNAITLNTLIKGLCFCGEIKRALHFHDKVVAQGFQLDQVS 168

Query: 371 YNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLE 430
           Y TL++GL +AG+     +L  +++ ++V+PDL  Y  +I  LCKN  + +A  L+  + 
Sbjct: 169 YGTLINGLCKAGETKAVARLLRKLEGHSVKPDLVMYTTIIHCLCKNKLLGDACDLYSEMI 228

Query: 431 MNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLE 490
           +      +  +  LI G C  G L  A+ L +++  K + P V T++I+I  L ++GK++
Sbjct: 229 VKGISPNVFTYTTLIHGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALAKEGKID 288

Query: 491 KANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSI 550
           +A      M+     PN+VT+ +L+ G  +N+   + + L  KM   E+ + P+  +++I
Sbjct: 289 EAMSLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMK--EQGIQPNVYSYTI 346

Query: 551 VVDLLAK 557
           ++D L K
Sbjct: 347 LLDALCK 353



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 88/291 (30%), Positives = 149/291 (51%), Gaps = 19/291 (6%)

Query: 77  SFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEA 136
           S+  L   + K     AV    RKL    + PD +    +I+C       LC    + +A
Sbjct: 168 SYGTLINGLCKAGETKAVARLLRKLEGHSVKPDLVMYTTIIHC-------LCKNKLLGDA 220

Query: 137 TWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSY 196
             L+  MI  G+ P+V TY TLI+GFC  GNL  A  L  +M   +         +++++
Sbjct: 221 CDLYSEMIVKGISPNVFTYTTLIHGFCIMGNLKEAFSLLNEMKLKNIN------PDVYTF 274

Query: 197 SIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLD 256
           +I+ID+L KEG +D+A  LF EMK + + P +V  T+LI G C   + E    L  +M +
Sbjct: 275 NILIDALAKEGKIDEAMSLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKE 334

Query: 257 LGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDT 316
            G +PN+ ++ +++D LCKGG++  A    + ++ +G + +  TYN +++G C  G    
Sbjct: 335 QGIQPNVYSYTILLDALCKGGRLENAKQFFQHLLVKGYHLNVRTYNVMINGLCKAGLFGD 394

Query: 317 AREIFLSMHSKGCKHTVVSYNILINGYCKILNVEE---AMSLYRQIISNGV 364
             ++   M  KGC    +++  +I   C +L  +E   A    R++I+ G+
Sbjct: 395 VMDLKSKMEGKGCMPNAITFKTII---CALLEKDENDKAEKFLREMIARGL 442



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 71/251 (28%), Positives = 117/251 (46%), Gaps = 2/251 (0%)

Query: 336 YNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMK 395
           +N +++   K       +SL++Q   NG+   + T + L++         +A  +F  + 
Sbjct: 64  FNNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSILINCFCHLTHITFAFSVFANIL 123

Query: 396 LYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLD 455
                P+  T N LI GLC    ++ A+     +    F+     +  LI+GLCKAG   
Sbjct: 124 KRGYHPNAITLNTLIKGLCFCGEIKRALHFHDKVVAQGFQLDQVSYGTLINGLCKAGETK 183

Query: 456 NAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLM 515
               L  KL    + P +V Y+ +IH LC+   L  A D    M   G +PNV T+ TL+
Sbjct: 184 AVARLLRKLEGHSVKPDLVMYTTIIHCLCKNKLLGDACDLYSEMIVKGISPNVFTYTTLI 243

Query: 516 HGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKSSYRAC 575
           HGF       +   LL++M    +N+ PD  TF+I++D LAK+ K  E  ++ +      
Sbjct: 244 HGFCIMGNLKEAFSLLNEMKL--KNINPDVYTFNILIDALAKEGKIDEAMSLFEEMKHKN 301

Query: 576 LYVTIFQPSSL 586
           ++  I   +SL
Sbjct: 302 MFPNIVTYTSL 312



 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 46/169 (27%), Positives = 78/169 (46%), Gaps = 13/169 (7%)

Query: 56  LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNI 115
           ++EA   F  M H    P I ++  L   + KN H +  I+  +K+   G+ P+  +  I
Sbjct: 287 IDEAMSLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPNVYSYTI 346

Query: 116 LINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLH 175
           L++        LC   R++ A   F++++  G   +V TY  +ING C+ G     + L 
Sbjct: 347 LLD-------ALCKGGRLENAKQFFQHLLVKGYHLNVRTYNVMINGLCKAGLFGDVMDLK 399

Query: 176 KKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGI 224
            KM       G     N  ++  II +L ++   DKA++   EM  RG+
Sbjct: 400 SKM------EGKGCMPNAITFKTIICALLEKDENDKAEKFLREMIARGL 442


>gi|356561416|ref|XP_003548977.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Glycine max]
          Length = 456

 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 126/415 (30%), Positives = 212/415 (51%), Gaps = 13/415 (3%)

Query: 56  LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNI 115
           +++A   F  M  M  +PPI  F  + G +AK +HY   IS  +++   G+ P+ +TLNI
Sbjct: 33  VDDAISQFNGMLLMHHTPPIVEFGEILGYLAKMKHYSTAISLSKQMEVKGIEPNLVTLNI 92

Query: 116 LINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLH 175
           LINCF       C   ++  +  +   ++  G +P+ IT  TL+ G C  G +  ++  H
Sbjct: 93  LINCF-------CHLGQMSFSFSVLGKILKLGYQPNTITLTTLMKGLCLKGEVQKSVHFH 145

Query: 176 KKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLI 235
            K+V+  ++       N  SY  +++ LCK G    A +    ++       VV+  T+I
Sbjct: 146 DKVVAQGFQ------MNQVSYGTLLNGLCKIGETRCAIKFLRMIEDSSTGLNVVMYNTII 199

Query: 236 HGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLN 295
            G C      E    + EM   G  PN++T+  +I   C  G++  A  LL  MI + +N
Sbjct: 200 DGLCKDKLVNEAYDFYSEMNARGIFPNVITYTTLIGGFCLAGQLTGAFSLLNEMILKNIN 259

Query: 296 PDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSL 355
           P+ +TY  L+D  C  G++  A+ +   MH +G    VV+Y  L++G+CK  N+++A +L
Sbjct: 260 PNVYTYAILIDALCKEGKVKEAKNLLAEMHYRGQPADVVTYTSLLDGFCKNQNLDKATAL 319

Query: 356 YRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCK 415
           + ++   G++    TY  L+ GL + G+   AQKLF ++ +     D+ TYN++I GLCK
Sbjct: 320 FMKMKEWGIQPNKYTYTALIDGLCKGGRLKDAQKLFQDLLVKGCCIDVCTYNVMIGGLCK 379

Query: 416 NNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLV 470
              + EA+ +   +E N     +  F  +I  L K    D A +L H++  KGL+
Sbjct: 380 EGMLDEALAIKSKMEDNGCIPNVVTFEIIIRSLFKKDENDKAEKLLHEMIAKGLL 434



 Score =  195 bits (495), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 120/410 (29%), Positives = 205/410 (50%), Gaps = 14/410 (3%)

Query: 129 VENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLI 188
           ++N + +A   F  M+     P ++ +G ++    +  + S A+ L K+M     E    
Sbjct: 29  IDNVVDDAISQFNGMLLMHHTPPIVEFGEILGYLAKMKHYSTAISLSKQMEVKGIE---- 84

Query: 189 SKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVN 248
              N+ + +I+I+  C  G +  +  +  ++   G  P  +  TTL+ G C  G  ++  
Sbjct: 85  --PNLVTLNILINCFCHLGQMSFSFSVLGKILKLGYQPNTITLTTLMKGLCLKGEVQKSV 142

Query: 249 GLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGY 308
               +++  G + N +++  +++ LCK G+   A   L ++       +   YN+++DG 
Sbjct: 143 HFHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAIKFLRMIEDSSTGLNVVMYNTIIDGL 202

Query: 309 CLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTV 368
           C    ++ A + +  M+++G    V++Y  LI G+C    +  A SL  ++I   +   V
Sbjct: 203 CKDKLVNEAYDFYSEMNARGIFPNVITYTTLIGGFCLAGQLTGAFSLLNEMILKNINPNV 262

Query: 369 ITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHM 428
            TY  L+  L + G+   A+ L  EM       D+ TY  L+DG CKN  + +A  LF  
Sbjct: 263 YTYAILIDALCKEGKVKEAKNLLAEMHYRGQPADVVTYTSLLDGFCKNQNLDKATALF-- 320

Query: 429 LEMNKFEFGIE----IFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLC 484
             M   E+GI+     +  LIDGLCK GRL +A +LF  L  KG    V TY++MI GLC
Sbjct: 321 --MKMKEWGIQPNKYTYTALIDGLCKGGRLKDAQKLFQDLLVKGCCIDVCTYNVMIGGLC 378

Query: 485 RKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKM 534
           ++G L++A      ME NGC PNVVTF  ++    + ++  K  +LLH+M
Sbjct: 379 KEGMLDEALAIKSKMEDNGCIPNVVTFEIIIRSLFKKDENDKAEKLLHEM 428



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 83/300 (27%), Positives = 148/300 (49%), Gaps = 37/300 (12%)

Query: 258 GPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTA 317
           G  PNL+T N++I+C C  G+++ +  +L  +++ G  P+  T  +LM G CL G     
Sbjct: 82  GIEPNLVTLNILINCFCHLGQMSFSFSVLGKILKLGYQPNTITLTTLMKGLCLKGE---- 137

Query: 318 REIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSG 377
                                          V++++  + ++++ G +   ++Y TLL+G
Sbjct: 138 -------------------------------VQKSVHFHDKVVAQGFQMNQVSYGTLLNG 166

Query: 378 LFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFG 437
           L + G+   A K    ++  +   ++  YN +IDGLCK+  V EA   +  +        
Sbjct: 167 LCKIGETRCAIKFLRMIEDSSTGLNVVMYNTIIDGLCKDKLVNEAYDFYSEMNARGIFPN 226

Query: 438 IEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLL 497
           +  +  LI G C AG+L  A+ L +++  K + P V TY+I+I  LC++GK+++A + L 
Sbjct: 227 VITYTTLIGGFCLAGQLTGAFSLLNEMILKNINPNVYTYAILIDALCKEGKVKEAKNLLA 286

Query: 498 YMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAK 557
            M   G   +VVT+ +L+ GF +N    K   L  KM   E  + P+  T++ ++D L K
Sbjct: 287 EMHYRGQPADVVTYTSLLDGFCKNQNLDKATALFMKMK--EWGIQPNKYTYTALIDGLCK 344



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 55/176 (31%), Positives = 87/176 (49%), Gaps = 15/176 (8%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CK G   + EA+     M +      + ++  L     KN++ D   + + K+   G+ P
Sbjct: 273 CKEG--KVKEAKNLLAEMHYRGQPADVVTYTSLLDGFCKNQNLDKATALFMKMKEWGIQP 330

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           +  T   LI+       GLC   R+K+A  LF++++  G   DV TY  +I G C+ G L
Sbjct: 331 NKYTYTALID-------GLCKGGRLKDAQKLFQDLLVKGCCIDVCTYNVMIGGLCKEGML 383

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGI 224
             AL +  KM     +NG I   N+ ++ III SL K+   DKA++L  EM  +G+
Sbjct: 384 DEALAIKSKM----EDNGCIP--NVVTFEIIIRSLFKKDENDKAEKLLHEMIAKGL 433


>gi|115486223|ref|NP_001068255.1| Os11g0607100 [Oryza sativa Japonica Group]
 gi|77551887|gb|ABA94684.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|113645477|dbj|BAF28618.1| Os11g0607100 [Oryza sativa Japonica Group]
          Length = 671

 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 132/445 (29%), Positives = 212/445 (47%), Gaps = 14/445 (3%)

Query: 59  ARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILIN 118
           AR  F  MT     P   SF  L     +    + V +    +   G   D  T  +++ 
Sbjct: 165 ARKVFDGMTRAGVCPDERSFRALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVV- 223

Query: 119 CFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKM 178
                 R LC + R K+ +  F+ M+  G  P+V+ Y   I+G C+   +  A  + ++M
Sbjct: 224 ------RSLCEKGRFKDVSEFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEM 277

Query: 179 VSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEM-KGRGINPAVVVCTTLIHG 237
           V      GL  K N+++++ +ID LCK G  ++A  LFL++ K     P V   T +I G
Sbjct: 278 VG----RGL--KPNVYTHTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGG 331

Query: 238 FCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPD 297
           +C  G       L + M++ G +PN  T+  +I   CKGG  + A  L+  M Q G  P+
Sbjct: 332 YCREGKLARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPN 391

Query: 298 RFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYR 357
            +TYN+++DG+C  G+I  A ++     S+G K   ++Y ILI  +CK  ++  A+ L+ 
Sbjct: 392 IYTYNAVIDGFCKKGKIQEAYKVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFD 451

Query: 358 QIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNN 417
           +++ NG    +  Y +L+S   Q  Q   +QK FD+  +  + P   TY  +I G CK  
Sbjct: 452 RMVENGCCPDIEAYTSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVG 511

Query: 418 CVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYS 477
               A+++F  +  N        +  LI GLCK  RL+ A  L+  +  K LVP  VT  
Sbjct: 512 RSTLALRVFERMVQNGCFADSITYGALISGLCKESRLEEAKALYEGMLDKRLVPCEVTRV 571

Query: 478 IMIHGLCRKGKLEKANDFLLYMEKN 502
            +    CR+ K   A   L  ++K 
Sbjct: 572 TLTFEYCRREKTSIAVSVLDRLDKR 596



 Score =  194 bits (494), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 129/452 (28%), Positives = 227/452 (50%), Gaps = 20/452 (4%)

Query: 87  KNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAF 146
           K R  D V  F+R+++  G  P+ +     I+       GLC    +K+A  + + M+  
Sbjct: 229 KGRFKD-VSEFFRRMLETGTPPNVVNYTAWID-------GLCKRRYVKQAFHVLEEMVGR 280

Query: 147 GVRPDVITYGTLINGFCRTGNLSVALRLHKKMV-SGDYENGLISKTNIFSYSIIIDSLCK 205
           G++P+V T+ TLI+G C+ G    A RL  K++ S  Y      K N+ +Y+++I   C+
Sbjct: 281 GLKPNVYTHTTLIDGLCKIGWTERAFRLFLKLIKSSSY------KPNVHTYTVMIGGYCR 334

Query: 206 EGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLT 265
           EG + +A+ L + M  +G+ P     TTLI G C  G+++    L  +M   G  PN+ T
Sbjct: 335 EGKLARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYT 394

Query: 266 FNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMH 325
           +N +ID  CK GKI EA  +L +   +GL  D+ TY  L+  +C  G I  A ++F  M 
Sbjct: 395 YNAVIDGFCKKGKIQEAYKVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMV 454

Query: 326 SKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAG 385
             GC   + +Y  LI+ YC+   +EE+   + + +  G+  T  TY ++++G  + G++ 
Sbjct: 455 ENGCCPDIEAYTSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRST 514

Query: 386 YAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFN-CL 444
            A ++F+ M       D  TY  LI GLCK + ++EA  L+  + ++K     E+    L
Sbjct: 515 LALRVFERMVQNGCFADSITYGALISGLCKESRLEEAKALYEGM-LDKRLVPCEVTRVTL 573

Query: 445 IDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGC 504
               C+  +   A  +  +L ++  V TV    +++  L   G ++ A+ FL  +     
Sbjct: 574 TFEYCRREKTSIAVSVLDRLDKRQQVHTV---DVVVRKLSALGDVDAASLFLKKVLDEDY 630

Query: 505 APNVVTFNTLMHGFLQNNKTSKVVELLHKMAE 536
           A +  T+   ++   +NN+ +   E+  K ++
Sbjct: 631 AVDHATYTGFINSCYENNRYALASEMSEKFSK 662



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 116/438 (26%), Positives = 211/438 (48%), Gaps = 9/438 (2%)

Query: 131 NRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISK 190
            R+ EA  +   M + G+   V T   ++     TG+   A    +K+  G    G+   
Sbjct: 125 GRLPEAADMVLEMRSHGLPLCVETANWVLRVGLETGSFVYA----RKVFDGMTRAGVCPD 180

Query: 191 TNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGL 250
              F   +++   C+EG V++   L   M   G +     CT ++   C  G +++V+  
Sbjct: 181 ERSFRALVVV--CCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVSEF 238

Query: 251 FIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCL 310
           F  ML+ G  PN++ +   ID LCK   + +A  +LE M+ RGL P+ +T+ +L+DG C 
Sbjct: 239 FRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGLCK 298

Query: 311 VGRIDTAREIFLSM-HSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVI 369
           +G  + A  +FL +  S   K  V +Y ++I GYC+   +  A  L  +++  G++    
Sbjct: 299 IGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTN 358

Query: 370 TYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHML 429
           TY TL+ G  + G    A +L ++MK     P++ TYN +IDG CK   +QEA K+  M 
Sbjct: 359 TYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMA 418

Query: 430 EMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKL 489
                +F    +  LI   CK G +  A +LF ++ + G  P +  Y+ +I   C++ ++
Sbjct: 419 TSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLISTYCQQRQM 478

Query: 490 EKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFS 549
           E++  F       G  P   T+ +++ G+ +  +++  + +  +M   +     D  T+ 
Sbjct: 479 EESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTLALRVFERMV--QNGCFADSITYG 536

Query: 550 IVVDLLAKDEKYHECSAV 567
            ++  L K+ +  E  A+
Sbjct: 537 ALISGLCKESRLEEAKAL 554



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 110/449 (24%), Positives = 197/449 (43%), Gaps = 33/449 (7%)

Query: 149 RPDVIT----YGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLC 204
           RPD+      Y T    F   G+L +A  + + MV+   E G + +              
Sbjct: 84  RPDLRRLMRLYVTAATAFVARGSLPMAHEVMRGMVAAFGEAGRLPE-------------- 129

Query: 205 KEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLL 264
                  A ++ LEM+  G+   V     ++      G++     +F  M   G  P+  
Sbjct: 130 -------AADMVLEMRSHGLPLCVETANWVLRVGLETGSFVYARKVFDGMTRAGVCPDER 182

Query: 265 TFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSM 324
           +F  ++   C+ GK+ E + LL  M + G + D  T   ++   C  GR     E F  M
Sbjct: 183 SFRALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVSEFFRRM 242

Query: 325 HSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQA 384
              G    VV+Y   I+G CK   V++A  +  +++  G++  V T+ TL+ GL + G  
Sbjct: 243 LETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGLCKIGWT 302

Query: 385 GYAQKLFDEM-KLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNC 443
             A +LF ++ K  + +P++ TY ++I G C+   +  A  L   +     +     +  
Sbjct: 303 ERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTT 362

Query: 444 LIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNG 503
           LI G CK G  D A+EL +K+ Q+G +P + TY+ +I G C+KGK+++A   L      G
Sbjct: 363 LIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQG 422

Query: 504 CAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
              + +T+  L+    +    +  ++L  +M   E    PD   ++ ++    +  +  E
Sbjct: 423 LKFDKITYTILITEHCKQGHITYALDLFDRMV--ENGCCPDIEAYTSLISTYCQQRQMEE 480

Query: 564 CSAVSKSSYRACLYVTIF-QPSSLGSMIG 591
               S+  +  CL + +     +  SMI 
Sbjct: 481 ----SQKFFDKCLMIGLLPTKQTYTSMIA 505


>gi|302763351|ref|XP_002965097.1| hypothetical protein SELMODRAFT_82937 [Selaginella moellendorffii]
 gi|300167330|gb|EFJ33935.1| hypothetical protein SELMODRAFT_82937 [Selaginella moellendorffii]
          Length = 540

 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 138/498 (27%), Positives = 235/498 (47%), Gaps = 50/498 (10%)

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           D  + NI+I       RGLC+  R   A  L K M A G++   +T+G ++   C    +
Sbjct: 3   DVASYNIVI-------RGLCLAGRFSRAYELLKEMEALGIKKSQVTHGIILKALCERKEV 55

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
             AL     +          S  ++ SY+ +I  L   G +D A ELF EM   G +  V
Sbjct: 56  DQALSYFHSVSPR-------SDLDVVSYTTLIMGLADSGRIDVACELFEEMSSSG-SQCV 107

Query: 229 VVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLEL 288
           V  T +I+    A   ++    F  M+     P+L TF V+I  LCK GK+N A  + + 
Sbjct: 108 VAYTAIINALFKAHRPDQAIACFERMVARKCDPDLRTFTVVITGLCKAGKLNRACEVFQE 167

Query: 289 MIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCK--- 345
           M ++G  PD   Y SL+DG      +D AR++   + S+G K T V+Y   I+G CK   
Sbjct: 168 MNRKGWKPDIIVYTSLVDGLSKASMMDEARKLLQEIVSRGMKPTEVTYTSFISGLCKNGR 227

Query: 346 ------------------ILN-----------VEEAMSLYRQIISNGVRQTVITYNTLLS 376
                             +L+           +EEA++L  +++  GV   V  Y  L+ 
Sbjct: 228 VEEAGKLVREMGKMCAAEVLHCIFGGYVLEGKIEEALTLKDEMVKKGVTLDVRCYTNLIH 287

Query: 377 GLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEF 436
           GLF   +   AQ++F+ M      PD  TY +++   CK   +Q A K+  +++    E 
Sbjct: 288 GLFYVRRNDEAQEMFEAMVRQGCVPDTRTYGMIVSHFCKQGKMQAACKVVEIMDAAGLEA 347

Query: 437 GIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFL 496
              ++N L+DG     R   A  ++  + +K + P++VTY+I++ GLC+ G+   A   L
Sbjct: 348 NCHVYNSLMDGFLGVNRAREAINVYSTMLRKMVKPSIVTYNILMLGLCKLGQTADARLVL 407

Query: 497 LYM-EKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLL 555
             M E++G  P +V++ TL+HG  +  +  + +++  +M   +  +VPD  + + ++  L
Sbjct: 408 REMRERDGIVPTIVSYRTLIHGLGKAGRADEAIDVFTEMV--DNGVVPDCPSCTSLIQAL 465

Query: 556 AKDEKYHECSAVSKSSYR 573
           A  ++  E + + +   R
Sbjct: 466 AMADRMDEATQLLRDMPR 483



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 123/448 (27%), Positives = 218/448 (48%), Gaps = 17/448 (3%)

Query: 72  SPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVEN 131
           S  + ++  +  A+ K    D  I+ + ++V+    PD  T  ++I        GLC   
Sbjct: 104 SQCVVAYTAIINALFKAHRPDQAIACFERMVARKCDPDLRTFTVVIT-------GLCKAG 156

Query: 132 RIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKT 191
           ++  A  +F+ M   G +PD+I Y +L++G  +   +  A +L +++VS     G+  K 
Sbjct: 157 KLNRACEVFQEMNRKGWKPDIIVYTSLVDGLSKASMMDEARKLLQEIVS----RGM--KP 210

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
              +Y+  I  LCK G V++A +L  EM G+     V+ C  +  G+   G  EE   L 
Sbjct: 211 TEVTYTSFISGLCKNGRVEEAGKLVREM-GKMCAAEVLHC--IFGGYVLEGKIEEALTLK 267

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
            EM+  G   ++  +  +I  L    + +EA  + E M+++G  PD  TY  ++  +C  
Sbjct: 268 DEMVKKGVTLDVRCYTNLIHGLFYVRRNDEAQEMFEAMVRQGCVPDTRTYGMIVSHFCKQ 327

Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
           G++  A ++   M + G +     YN L++G+  +    EA+++Y  ++   V+ +++TY
Sbjct: 328 GKMQAACKVVEIMDAAGLEANCHVYNSLMDGFLGVNRAREAINVYSTMLRKMVKPSIVTY 387

Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYN-VEPDLSTYNILIDGLCKNNCVQEAVKLFHMLE 430
           N L+ GL + GQ   A+ +  EM+  + + P + +Y  LI GL K     EA+ +F  + 
Sbjct: 388 NILMLGLCKLGQTADARLVLREMRERDGIVPTIVSYRTLIHGLGKAGRADEAIDVFTEMV 447

Query: 431 MNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLE 490
            N           LI  L  A R+D A +L   +P+ G+ P  + Y+ ++  LC   K+ 
Sbjct: 448 DNGVVPDCPSCTSLIQALAMADRMDEATQLLRDMPRMGITPDALAYNALVKVLCGGAKVG 507

Query: 491 KANDFLLYMEKNGCAPNVVTFNTLMHGF 518
            A D L+ M  N C P+  TF  +  GF
Sbjct: 508 PAWDVLVEMMDNSCVPDGSTFRAMKLGF 535



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 121/423 (28%), Positives = 208/423 (49%), Gaps = 20/423 (4%)

Query: 131 NRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISK 190
           +R  +A   F+ M+A    PD+ T+  +I G C+ G L+ A  + ++M    +      K
Sbjct: 121 HRPDQAIACFERMVARKCDPDLRTFTVVITGLCKAGKLNRACEVFQEMNRKGW------K 174

Query: 191 TNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGL 250
            +I  Y+ ++D L K  ++D+A++L  E+  RG+ P  V  T+ I G C  G  EE   L
Sbjct: 175 PDIIVYTSLVDGLSKASMMDEARKLLQEIVSRGMKPTEVTYTSFISGLCKNGRVEEAGKL 234

Query: 251 FIEMLDLGPRPNLLTFNVMIDCLCKG----GKINEANGLLELMIQRGLNPDRFTYNSLMD 306
             EM         +    ++ C+  G    GKI EA  L + M+++G+  D   Y +L+ 
Sbjct: 235 VREM-------GKMCAAEVLHCIFGGYVLEGKIEEALTLKDEMVKKGVTLDVRCYTNLIH 287

Query: 307 GYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQ 366
           G   V R D A+E+F +M  +GC     +Y ++++ +CK   ++ A  +   + + G+  
Sbjct: 288 GLFYVRRNDEAQEMFEAMVRQGCVPDTRTYGMIVSHFCKQGKMQAACKVVEIMDAAGLEA 347

Query: 367 TVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEA-VKL 425
               YN+L+ G     +A  A  ++  M    V+P + TYNIL+ GLCK     +A + L
Sbjct: 348 NCHVYNSLMDGFLGVNRAREAINVYSTMLRKMVKPSIVTYNILMLGLCKLGQTADARLVL 407

Query: 426 FHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCR 485
             M E +     I  +  LI GL KAGR D A ++F ++   G+VP   + + +I  L  
Sbjct: 408 REMRERDGIVPTIVSYRTLIHGLGKAGRADEAIDVFTEMVDNGVVPDCPSCTSLIQALAM 467

Query: 486 KGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDD 545
             ++++A   L  M + G  P+ + +N L+       K     ++L +M   + + VPD 
Sbjct: 468 ADRMDEATQLLRDMPRMGITPDALAYNALVKVLCGGAKVGPAWDVLVEMM--DNSCVPDG 525

Query: 546 TTF 548
           +TF
Sbjct: 526 STF 528



 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 69/261 (26%), Positives = 116/261 (44%), Gaps = 16/261 (6%)

Query: 57  NEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNIL 116
           +EA+  F  M      P   ++ ++     K     A       + + GL  +    N L
Sbjct: 296 DEAQEMFEAMVRQGCVPDTRTYGMIVSHFCKQGKMQAACKVVEIMDAAGLEANCHVYNSL 355

Query: 117 INCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHK 176
           ++       G    NR +EA  ++  M+   V+P ++TY  L+ G C+ G  + A  + +
Sbjct: 356 MD-------GFLGVNRAREAINVYSTMLRKMVKPSIVTYNILMLGLCKLGQTADARLVLR 408

Query: 177 KMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIH 236
           +M   D   G++    I SY  +I  L K G  D+A ++F EM   G+ P    CT+LI 
Sbjct: 409 EMRERD---GIVP--TIVSYRTLIHGLGKAGRADEAIDVFTEMVDNGVVPDCPSCTSLIQ 463

Query: 237 GFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNP 296
               A   +E   L  +M  +G  P+ L +N ++  LC G K+  A  +L  M+     P
Sbjct: 464 ALAMADRMDEATQLLRDMPRMGITPDALAYNALVKVLCGGAKVGPAWDVLVEMMDNSCVP 523

Query: 297 DRFTYNSLMDGYCLVGRIDTA 317
           D  T+ ++  G+    + DTA
Sbjct: 524 DGSTFRAMKLGF----KADTA 540


>gi|37572999|dbj|BAC98691.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|222640519|gb|EEE68651.1| hypothetical protein OsJ_27230 [Oryza sativa Japonica Group]
          Length = 691

 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 138/489 (28%), Positives = 230/489 (47%), Gaps = 15/489 (3%)

Query: 58  EARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILI 117
           +A   F  MT     P   ++N +     K    +A      ++V  GL P+ +T N+L+
Sbjct: 218 DAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLL 277

Query: 118 NCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKK 177
           +       GLC   R+ E + L   M +  + PD  TY  L +G  R G+    L L  K
Sbjct: 278 S-------GLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGK 330

Query: 178 MVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHG 237
            +    +NG+      ++ SI+++ LCK+G V  A+E+   +   G+ P  V+  TLI+G
Sbjct: 331 YL----KNGVT--IGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLING 384

Query: 238 FCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPD 297
           +C  G  E     F +M     +P+ +T+N +I+ LCK  +I  A  LL  M   G+NP 
Sbjct: 385 YCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPT 444

Query: 298 RFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYR 357
             T+N+L+D Y   G+++    +   M   G K  VVSY  ++N +CK   + EA+++  
Sbjct: 445 VETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILD 504

Query: 358 QIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNN 417
            +    V      YN ++    + G    A  L ++MK   + P + TYN+LI GLC  +
Sbjct: 505 DMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQS 564

Query: 418 CVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYS 477
            + EA ++ + L  ++       +N LI   C  G +D A +L  ++ + G+  TV TY 
Sbjct: 565 QISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYH 624

Query: 478 IMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEP 537
            +I GL   G+L +       M +N   P+    N ++  + +     K  +L  +M + 
Sbjct: 625 QLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQK 684

Query: 538 ERNLVPDDT 546
             N   DDT
Sbjct: 685 RNN--HDDT 691



 Score =  205 bits (521), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 136/493 (27%), Positives = 232/493 (47%), Gaps = 35/493 (7%)

Query: 71  PSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILIN-CFGNKERGLCV 129
           P P +SS NLL  A+     +  V   +  L S G  PD    N  +  C    + G  V
Sbjct: 125 PLPSLSSCNLLLEALLSLGRHADVRRAFGILASAGARPDTFAWNKAVQACVAAGDLGEAV 184

Query: 130 ----------------------------ENRIKEATWLFKNMIAFGVRPDVITYGTLING 161
                                         R  +A  +F  M    V P+ ITY T+I+G
Sbjct: 185 GMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDG 244

Query: 162 FCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKG 221
             + G+L    RL  +MV     +GL  K N  +Y++++  LC+ G + +   L  EM  
Sbjct: 245 HIKGGDLEAGFRLRDQMVC----HGL--KPNAITYNVLLSGLCRAGRMGETSALLDEMAS 298

Query: 222 RGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINE 281
           + + P     + L  G    G+ + +  LF + L  G      T +++++ LCK GK++ 
Sbjct: 299 QKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSI 358

Query: 282 ANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILIN 341
           A  +L+ ++  GL P R  YN+L++GYC  G ++ A   F  M S+  K   ++YN LIN
Sbjct: 359 AEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALIN 418

Query: 342 GYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEP 401
           G CK   +  A  L  ++  NGV  TV T+NTL+    + GQ      +  EM+   ++P
Sbjct: 419 GLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKP 478

Query: 402 DLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELF 461
           ++ +Y  +++  CKN  + EAV +   +         +++N +ID   + G  D A+ L 
Sbjct: 479 NVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILV 538

Query: 462 HKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQN 521
            K+   G+ P++VTY+++I GLC + ++ +A + +  +  +   P+ V++NTL+      
Sbjct: 539 EKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYR 598

Query: 522 NKTSKVVELLHKM 534
               K ++L  +M
Sbjct: 599 GNIDKALDLQQRM 611



 Score =  195 bits (495), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 125/456 (27%), Positives = 219/456 (48%), Gaps = 42/456 (9%)

Query: 132 RIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKT 191
           R  +    F  + + G RPD   +   +      G+L  A+ + ++M             
Sbjct: 144 RHADVRRAFGILASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDG-----APPP 198

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
           N FSY+++I  + + G    A E+F EM  R + P  +   T+I G    G+ E    L 
Sbjct: 199 NAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLR 258

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
            +M+  G +PN +T+NV++  LC+ G++ E + LL+ M  + + PD FTY+ L DG    
Sbjct: 259 DQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRN 318

Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
           G       +F      G      + +IL+NG CK   V  A  + + +++ G+  T + Y
Sbjct: 319 GDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIY 378

Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
           NTL++G  Q G+   A   F +MK  +++PD  TYN LI+GLCK   +  A  L   ++ 
Sbjct: 379 NTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQD 438

Query: 432 NKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEK 491
           N     +E FN LID   + G+L+  + +  ++ + GL P VV+Y  +++  C+ GK+ +
Sbjct: 439 NGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPE 498

Query: 492 A-------------------------------ND--FLLY--MEKNGCAPNVVTFNTLMH 516
           A                               ND  F+L   M+ NG +P++VT+N L+ 
Sbjct: 499 AVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIK 558

Query: 517 GFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVV 552
           G    ++ S+  E+++ ++     L+PD  +++ ++
Sbjct: 559 GLCNQSQISEAEEIINSLS--NHRLIPDAVSYNTLI 592



 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 115/419 (27%), Positives = 204/419 (48%), Gaps = 15/419 (3%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           C++G   + E       M   +  P   ++++LF  +++N    A++S + K +  G+  
Sbjct: 281 CRAG--RMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTI 338

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
              T +IL+N       GLC + ++  A  + ++++  G+ P  + Y TLING+C+TG L
Sbjct: 339 GDYTCSILLN-------GLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGEL 391

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
             A     +M S         K +  +Y+ +I+ LCK   +  A++L +EM+  G+NP V
Sbjct: 392 EGAFSTFGQMKSRHI------KPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTV 445

Query: 229 VVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLEL 288
               TLI  +   G  E+   +  EM + G +PN++++  +++  CK GKI EA  +L+ 
Sbjct: 446 ETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDD 505

Query: 289 MIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILN 348
           M  + + P+   YN+++D Y   G  D A  +   M S G   ++V+YN+LI G C    
Sbjct: 506 MFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQ 565

Query: 349 VEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNI 408
           + EA  +   + ++ +    ++YNTL+S     G    A  L   M  Y ++  + TY+ 
Sbjct: 566 ISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQ 625

Query: 409 LIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQK 467
           LI GL     + E   L+  +  N       I N +++   K G    A +L  ++ QK
Sbjct: 626 LISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQK 684



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 96/343 (27%), Positives = 159/343 (46%), Gaps = 38/343 (11%)

Query: 258 GPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDR------------------- 298
            P P+L + N++++ L   G+  +      ++   G  PD                    
Sbjct: 124 APLPSLSSCNLLLEALLSLGRHADVRRAFGILASAGARPDTFAWNKAVQACVAAGDLGEA 183

Query: 299 -----------------FTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILIN 341
                            F+YN ++ G    GR   A E+F  M  +      ++YN +I+
Sbjct: 184 VGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMID 243

Query: 342 GYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEP 401
           G+ K  ++E    L  Q++ +G++   ITYN LLSGL +AG+ G    L DEM    + P
Sbjct: 244 GHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVP 303

Query: 402 DLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELF 461
           D  TY+IL DGL +N   +  + LF     N    G    + L++GLCK G++  A E+ 
Sbjct: 304 DGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVL 363

Query: 462 HKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQN 521
             L   GLVPT V Y+ +I+G C+ G+LE A      M+     P+ +T+N L++G  + 
Sbjct: 364 QSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKA 423

Query: 522 NKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHEC 564
            + +   +LL +M +   N  P   TF+ ++D   +  +  +C
Sbjct: 424 ERITNAQDLLMEMQDNGVN--PTVETFNTLIDAYGRTGQLEKC 464


>gi|255556466|ref|XP_002519267.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223541582|gb|EEF43131.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 665

 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 120/417 (28%), Positives = 214/417 (51%), Gaps = 13/417 (3%)

Query: 134 KEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNI 193
           ++A  +F  +  FG +P V  Y  L++         +   ++  M     E       N+
Sbjct: 131 EQALKMFYRIREFGCQPTVKIYNHLLDAMLSENRFQMIEPIYSNMKRDGKE------PNV 184

Query: 194 FSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIE 253
           ++Y+I++ +LCK   VD A +L +EM  +G  P VV  TT+I      G  EE   L I 
Sbjct: 185 YTYNILLKALCKNNRVDGACKLLVEMSNKGCEPDVVSYTTVISSMSKLGKVEEARELSIR 244

Query: 254 MLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGR 313
                 +PN+  +N +I+  C+  K+ E   LL  M+++G++P+  TY++++     +G 
Sbjct: 245 F-----QPNVSVYNALINGFCREYKVKEVFLLLGQMVEKGIDPNVITYSTVISSLSGIGN 299

Query: 314 IDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNT 373
           ++ A  ++  M  +GC   V ++  L+ GY     V EA++++ ++   G    V+ YNT
Sbjct: 300 VELALAVWAKMFVRGCSPNVYTFTSLMKGYFMRGRVLEALNIWNRMAEEGFEPNVVAYNT 359

Query: 374 LLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNK 433
           L+ GL   G+ G A  +  +M+     P++STY  LIDG  K   +  A ++++ +  N 
Sbjct: 360 LIHGLCSHGKMGEAVSVSSKMERNGCSPNVSTYGALIDGFAKAGDLVGASEIWNKMMTNG 419

Query: 434 FEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKAN 493
               + ++  +++ LC++     AW L  K+      P  VT++  I GLC  G++E A 
Sbjct: 420 CIPNVVVYTSMVNVLCRSSMFSQAWSLIEKMSTDNCPPNTVTFNTFIKGLCCSGRVECAI 479

Query: 494 DFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEP--ERNLVPDDTTF 548
           +    ME+ GC+PN+ T+N ++ G L+ N+  + +EL+ +M E   E NLV  +T F
Sbjct: 480 NLFCQMEQYGCSPNIKTYNEVLDGLLKENRIKEALELVTEMEEKGMELNLVTYNTIF 536



 Score =  208 bits (530), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 133/481 (27%), Positives = 231/481 (48%), Gaps = 25/481 (5%)

Query: 72  SPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVEN 131
            P +  +N L  A+     +  +   Y  +   G  P+  T NIL+       + LC  N
Sbjct: 146 QPTVKIYNHLLDAMLSENRFQMIEPIYSNMKRDGKEPNVYTYNILL-------KALCKNN 198

Query: 132 RIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKT 191
           R+  A  L   M   G  PDV++Y T+I+   + G +  A  L  +            + 
Sbjct: 199 RVDGACKLLVEMSNKGCEPDVVSYTTVISSMSKLGKVEEARELSIRF-----------QP 247

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFL---EMKGRGINPAVVVCTTLIHGFCCAGNWEEVN 248
           N+  Y+ +I+  C+E    K KE+FL   +M  +GI+P V+  +T+I      GN E   
Sbjct: 248 NVSVYNALINGFCRE---YKVKEVFLLLGQMVEKGIDPNVITYSTVISSLSGIGNVELAL 304

Query: 249 GLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGY 308
            ++ +M   G  PN+ TF  ++      G++ EA  +   M + G  P+   YN+L+ G 
Sbjct: 305 AVWAKMFVRGCSPNVYTFTSLMKGYFMRGRVLEALNIWNRMAEEGFEPNVVAYNTLIHGL 364

Query: 309 CLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTV 368
           C  G++  A  +   M   GC   V +Y  LI+G+ K  ++  A  ++ ++++NG    V
Sbjct: 365 CSHGKMGEAVSVSSKMERNGCSPNVSTYGALIDGFAKAGDLVGASEIWNKMMTNGCIPNV 424

Query: 369 ITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHM 428
           + Y ++++ L ++     A  L ++M   N  P+  T+N  I GLC +  V+ A+ LF  
Sbjct: 425 VVYTSMVNVLCRSSMFSQAWSLIEKMSTDNCPPNTVTFNTFIKGLCCSGRVECAINLFCQ 484

Query: 429 LEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGK 488
           +E       I+ +N ++DGL K  R+  A EL  ++ +KG+   +VTY+ +  G C  GK
Sbjct: 485 MEQYGCSPNIKTYNEVLDGLLKENRIKEALELVTEMEEKGMELNLVTYNTIFGGFCNVGK 544

Query: 489 LEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTF 548
            E+A   L  M   G  P+ +T+NTL + +    K    ++LL K++   +  VP+   +
Sbjct: 545 FEEALKLLGKMLVGGVKPDAITYNTLTYAYCMQGKVKTAIQLLDKLSAGGK-WVPEVAAY 603

Query: 549 S 549
           +
Sbjct: 604 T 604



 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 115/435 (26%), Positives = 193/435 (44%), Gaps = 67/435 (15%)

Query: 194 FSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIE 253
            +Y I+I+ L +E  VD  + L  +MK  GI+ +  +   +I+ +   G  E+   +F  
Sbjct: 80  LTYQIMIEKLGRECDVDGVQYLLQQMKLEGISCSEDLFINVINTYRRVGLAEQALKMFYR 139

Query: 254 MLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGR 313
           + + G +P +  +N ++D +    +      +   M + G  P+ +TYN L+   C   R
Sbjct: 140 IREFGCQPTVKIYNHLLDAMLSENRFQMIEPIYSNMKRDGKEPNVYTYNILLKALCKNNR 199

Query: 314 IDTAREIFLSMHSKGCKHTVVS------------------------------YNILINGY 343
           +D A ++ + M +KGC+  VVS                              YN LING+
Sbjct: 200 VDGACKLLVEMSNKGCEPDVVSYTTVISSMSKLGKVEEARELSIRFQPNVSVYNALINGF 259

Query: 344 CKILNVEEAMSLYRQIISNGVRQTVITYNTLLS--------------------------- 376
           C+   V+E   L  Q++  G+   VITY+T++S                           
Sbjct: 260 CREYKVKEVFLLLGQMVEKGIDPNVITYSTVISSLSGIGNVELALAVWAKMFVRGCSPNV 319

Query: 377 --------GLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHM 428
                   G F  G+   A  +++ M     EP++  YN LI GLC +  + EAV +   
Sbjct: 320 YTFTSLMKGYFMRGRVLEALNIWNRMAEEGFEPNVVAYNTLIHGLCSHGKMGEAVSVSSK 379

Query: 429 LEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGK 488
           +E N     +  +  LIDG  KAG L  A E+++K+   G +P VV Y+ M++ LCR   
Sbjct: 380 MERNGCSPNVSTYGALIDGFAKAGDLVGASEIWNKMMTNGCIPNVVVYTSMVNVLCRSSM 439

Query: 489 LEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTF 548
             +A   +  M  + C PN VTFNT + G   + +    + L  +M   +    P+  T+
Sbjct: 440 FSQAWSLIEKMSTDNCPPNTVTFNTFIKGLCCSGRVECAINLFCQME--QYGCSPNIKTY 497

Query: 549 SIVVDLLAKDEKYHE 563
           + V+D L K+ +  E
Sbjct: 498 NEVLDGLLKENRIKE 512



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 105/368 (28%), Positives = 168/368 (45%), Gaps = 51/368 (13%)

Query: 51  SGIINLNEARYFFGYMTHMQPSPPISSF-NLLFGAVAKNRHYDAVISFYRKLVSIGLLPD 109
           SGI N+  A   +  M     SP + +F +L+ G   + R  +A ++ + ++   G  P+
Sbjct: 295 SGIGNVELALAVWAKMFVRGCSPNVYTFTSLMKGYFMRGRVLEA-LNIWNRMAEEGFEPN 353

Query: 110 FLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLS 169
            +  N LI+       GLC   ++ EA  +   M   G  P+V TYG LI+GF + G+L 
Sbjct: 354 VVAYNTLIH-------GLCSHGKMGEAVSVSSKMERNGCSPNVSTYGALIDGFAKAGDLV 406

Query: 170 VALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVV 229
            A  +  KM++    NG I   N+  Y+ +++ LC+  +  +A  L  +M      P  V
Sbjct: 407 GASEIWNKMMT----NGCIP--NVVVYTSMVNVLCRSSMFSQAWSLIEKMSTDNCPPNTV 460

Query: 230 VCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCL---------------- 273
              T I G CC+G  E    LF +M   G  PN+ T+N ++D L                
Sbjct: 461 TFNTFIKGLCCSGRVECAINLFCQMEQYGCSPNIKTYNEVLDGLLKENRIKEALELVTEM 520

Query: 274 -------------------CKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRI 314
                              C  GK  EA  LL  M+  G+ PD  TYN+L   YC+ G++
Sbjct: 521 EEKGMELNLVTYNTIFGGFCNVGKFEEALKLLGKMLVGGVKPDAITYNTLTYAYCMQGKV 580

Query: 315 DTAREIFLSMHSKG-CKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNT 373
            TA ++   + + G     V +Y  L+ G C  + VEEA+    ++++ G+     T+N 
Sbjct: 581 KTAIQLLDKLSAGGKWVPEVAAYTSLLWGICNQIGVEEAVLYLDKMLNEGICLNAATWNA 640

Query: 374 LLSGLFQA 381
           L+ GLF +
Sbjct: 641 LVRGLFNS 648



 Score =  125 bits (313), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 85/310 (27%), Positives = 150/310 (48%), Gaps = 7/310 (2%)

Query: 264 LTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLS 323
           LT+ +MI+ L +   ++    LL+ M   G++     + ++++ Y  VG  + A ++F  
Sbjct: 80  LTYQIMIEKLGRECDVDGVQYLLQQMKLEGISCSEDLFINVINTYRRVGLAEQALKMFYR 139

Query: 324 MHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQ 383
           +   GC+ TV  YN L++        +    +Y  +  +G    V TYN LL  L +  +
Sbjct: 140 IREFGCQPTVKIYNHLLDAMLSENRFQMIEPIYSNMKRDGKEPNVYTYNILLKALCKNNR 199

Query: 384 AGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNC 443
              A KL  EM     EPD+ +Y  +I  + K   V+EA +L       +F+  + ++N 
Sbjct: 200 VDGACKLLVEMSNKGCEPDVVSYTTVISSMSKLGKVEEARELSI-----RFQPNVSVYNA 254

Query: 444 LIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNG 503
           LI+G C+  ++   + L  ++ +KG+ P V+TYS +I  L   G +E A      M   G
Sbjct: 255 LINGFCREYKVKEVFLLLGQMVEKGIDPNVITYSTVISSLSGIGNVELALAVWAKMFVRG 314

Query: 504 CAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
           C+PNV TF +LM G+    +  + + + ++MA  E    P+   ++ ++  L    K  E
Sbjct: 315 CSPNVYTFTSLMKGYFMRGRVLEALNIWNRMA--EEGFEPNVVAYNTLIHGLCSHGKMGE 372

Query: 564 CSAVSKSSYR 573
             +VS    R
Sbjct: 373 AVSVSSKMER 382



 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 79/302 (26%), Positives = 133/302 (44%), Gaps = 16/302 (5%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
           N  +H  C  G   + EA      M     SP +S++  L    AK          + K+
Sbjct: 358 NTLIHGLCSHG--KMGEAVSVSSKMERNGCSPNVSTYGALIDGFAKAGDLVGASEIWNKM 415

Query: 102 VSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLING 161
           ++ G +P+ +    ++N        LC  +   +A  L + M      P+ +T+ T I G
Sbjct: 416 MTNGCIPNVVVYTSMVNV-------LCRSSMFSQAWSLIEKMSTDNCPPNTVTFNTFIKG 468

Query: 162 FCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKG 221
            C +G +  A+ L  +M             NI +Y+ ++D L KE  + +A EL  EM+ 
Sbjct: 469 LCCSGRVECAINLFCQMEQYG------CSPNIKTYNEVLDGLLKENRIKEALELVTEMEE 522

Query: 222 RGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINE 281
           +G+   +V   T+  GFC  G +EE   L  +ML  G +P+ +T+N +    C  GK+  
Sbjct: 523 KGMELNLVTYNTIFGGFCNVGKFEEALKLLGKMLVGGVKPDAITYNTLTYAYCMQGKVKT 582

Query: 282 ANGLLELMIQRG-LNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILI 340
           A  LL+ +   G   P+   Y SL+ G C    ++ A      M ++G      ++N L+
Sbjct: 583 AIQLLDKLSAGGKWVPEVAAYTSLLWGICNQIGVEEAVLYLDKMLNEGICLNAATWNALV 642

Query: 341 NG 342
            G
Sbjct: 643 RG 644



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 67/254 (26%), Positives = 130/254 (51%), Gaps = 14/254 (5%)

Query: 310 LVGRIDTAREIFLS-------MHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISN 362
           +V R+ T  +I L+        +SK  +HT ++Y I+I    +  +V+    L +Q+   
Sbjct: 49  VVMRLRTETDIVLASNYFRSIANSKAFQHTQLTYQIMIEKLGRECDVDGVQYLLQQMKLE 108

Query: 363 GVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEA 422
           G+  +   +  +++   + G A  A K+F  ++ +  +P +  YN L+D +   N  Q  
Sbjct: 109 GISCSEDLFINVINTYRRVGLAEQALKMFYRIREFGCQPTVKIYNHLLDAMLSENRFQMI 168

Query: 423 VKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHG 482
             ++  ++ +  E  +  +N L+  LCK  R+D A +L  ++  KG  P VV+Y+ +I  
Sbjct: 169 EPIYSNMKRDGKEPNVYTYNILLKALCKNNRVDGACKLLVEMSNKGCEPDVVSYTTVISS 228

Query: 483 LCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLV 542
           + + GK+E+A +  +  +     PNV  +N L++GF +  K  +V  LL +M   E+ + 
Sbjct: 229 MSKLGKVEEARELSIRFQ-----PNVSVYNALINGFCREYKVKEVFLLLGQMV--EKGID 281

Query: 543 PDDTTFSIVVDLLA 556
           P+  T+S V+  L+
Sbjct: 282 PNVITYSTVISSLS 295


>gi|449499490|ref|XP_004160831.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Cucumis sativus]
          Length = 1000

 Score =  208 bits (530), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 147/552 (26%), Positives = 246/552 (44%), Gaps = 75/552 (13%)

Query: 39  TQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISF- 97
           T  N  +H  CKS   + + A      M   +  P    +N+L G++         ++F 
Sbjct: 379 TIFNSLVHAYCKSD--DFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGELPGPVTFE 436

Query: 98  -----YRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDV 152
                Y +++S G + + + +     C       LC   + ++A  +   M+  G  PD 
Sbjct: 437 LAEKAYNEMLSAGTVLNKVNVVSFARC-------LCGFGKFEKAYKVIHEMMGNGFVPDT 489

Query: 153 ITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKA 212
            TY  +I   C    +  A  L K+M       G     ++++Y+I+ID   K G++ +A
Sbjct: 490 STYSEVIGFLCNASRVENAFFLFKEM------KGTGVVPDVYTYTILIDCFSKAGIIKQA 543

Query: 213 KELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDC 272
                EM   G  P VV  TTLIH +  A      N LF  M+  G  PN++T+  +ID 
Sbjct: 544 HNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDG 603

Query: 273 LCKGGKINEANGLLELMIQRG------------------LNPDRFTYNSLMDGYCLVGRI 314
            CK G I +A  +   M  RG                    P+  TY +L+DG C   ++
Sbjct: 604 YCKSGNIEKACQIYARM--RGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKV 661

Query: 315 DTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTL 374
             AR++  +M   GC+   + Y+ LI+G+CK   ++EA  ++ +++  G    V TY++L
Sbjct: 662 KDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVERGYNPNVYTYSSL 721

Query: 375 LSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKF 434
           +  LF+  +     K+  +M   +  P++  Y  +IDGL K     EA KL  M+E    
Sbjct: 722 IDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGC 781

Query: 435 EFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKA-- 492
           +  +  +  +IDG  KAG++D   ELF ++  KG  P  VTY+++I+  C  G L++A  
Sbjct: 782 KPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYA 841

Query: 493 -------------------------NDFLLYM------EKNGCAPNVVTFNTLMHGFLQN 521
                                     +F+L +      EKNG AP ++ +  L+  F++ 
Sbjct: 842 LLEEMKQTYWPKHVSSYCKVIEGYKREFILSLGLLEEVEKNGSAPTILLYKVLIDNFVKA 901

Query: 522 NKTSKVVELLHK 533
            +    +E LHK
Sbjct: 902 GRLEVALE-LHK 912



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 135/509 (26%), Positives = 235/509 (46%), Gaps = 82/509 (16%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGN----KERGLC 128
           P  S+++ + G +      +     ++++   G++PD  T  ILI+CF      K+    
Sbjct: 487 PDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNW 546

Query: 129 VENRIKE------------------------ATWLFKNMIAFGVRPDVITYGTLINGFCR 164
           ++  +++                        A  LF+ MIA G  P+VITY  LI+G+C+
Sbjct: 547 LDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCK 606

Query: 165 TGNLSVALRLHKKMVSGDYE-----------NGLISKTNIFSYSIIIDSLCKEGLVDKAK 213
           +GN+  A +++ +M  GD +           N +  K N+ +Y  ++D LCK   V  A+
Sbjct: 607 SGNIEKACQIYARM-RGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDAR 665

Query: 214 ELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCL 273
           +L   M   G  P  +V   LI GFC A   +E   +F +M++ G  PN+ T++ +ID L
Sbjct: 666 DLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVERGYNPNVYTYSSLIDRL 725

Query: 274 CKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTV 333
            K  +++    +L  M++    P+   Y  ++DG   V + D A ++ L M  KGCK  V
Sbjct: 726 FKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNV 785

Query: 334 VSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDE 393
           V+Y  +I+G+ K   V++ + L+R++ S G     +TY  L++     G    A  L +E
Sbjct: 786 VTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEE 845

Query: 394 MKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGR 453
           MK       +S+Y  +I+G  +   +  ++ L   +E N     I ++  LID   KAGR
Sbjct: 846 MKQTYWPKHVSSYCKVIEGYKREFIL--SLGLLEEVEKNGSAPTILLYKVLIDNFVKAGR 903

Query: 454 L-------------------------------------DNAWELFHKLPQKGLVPTVVTY 476
           L                                     D+A+ELF+ + + G++P + T+
Sbjct: 904 LEVALELHKEVISASMSMTAKKNLYTSLIYSFSYASKIDHAFELFYDMIRDGVIPDLGTF 963

Query: 477 SIMIHGLCRKGKLEKA---NDFLLYMEKN 502
             ++ GL R  + E+A   +D L  M+ N
Sbjct: 964 VHLLMGLIRVRRWEEALQLSDSLCQMDIN 992



 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 145/616 (23%), Positives = 253/616 (41%), Gaps = 112/616 (18%)

Query: 41  LNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRK 100
           LN  + + C++G+ N+  A    G +      P   ++N L     +    D     +R+
Sbjct: 209 LNVLIRKCCRNGLWNV--ALEELGRLKDFGYKPTRMTYNALVQVFLRADKLDTAQLVHRE 266

Query: 101 LVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLIN 160
           +  +GL  D  TL           + LC   + +EA  L +        P+ I Y  +I+
Sbjct: 267 MSELGLSMDEFTLGFF-------AQALCKVGKWREALSLIEKE---DFVPNTILYNKMIS 316

Query: 161 GFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMK 220
           G C       A+    +M S           N+ +Y I++     +  + + K +   M 
Sbjct: 317 GLCEASFFEEAMDFLNRMRSTS------CIPNVQTYRILLCGCLNKKQLGRCKRILSMMI 370

Query: 221 GRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKG---- 276
             G  P+  +  +L+H +C + ++     L  +M     +P  + +N++I  +C G    
Sbjct: 371 AEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGELP 430

Query: 277 -------------------------------------GKINEANGLLELMIQRGLNPDRF 299
                                                GK  +A  ++  M+  G  PD  
Sbjct: 431 GPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPDTS 490

Query: 300 TYNSLMDGYCLVGRIDTAREIFLSMHS--------------------------------- 326
           TY+ ++   C   R++ A  +F  M                                   
Sbjct: 491 TYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEM 550

Query: 327 --KGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQA 384
              GC+ TVV+Y  LI+ Y K   V  A  L+  +I+ G    VITY  L+ G  ++G  
Sbjct: 551 VRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNI 610

Query: 385 GYAQKLFDEMK---------LY-----NV--EPDLSTYNILIDGLCKNNCVQEAVKLFHM 428
             A +++  M+         +Y     NV  +P++ TY  L+DGLCK + V++A  L   
Sbjct: 611 EKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLET 670

Query: 429 LEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGK 488
           + ++  E    +++ LIDG CKA +LD A E+FHK+ ++G  P V TYS +I  L +  +
Sbjct: 671 MFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVERGYNPNVYTYSSLIDRLFKDKR 730

Query: 489 LEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTF 548
           L+     L  M +N CAPN+V +  ++ G  +  KT +  +L+  M   E+   P+  T+
Sbjct: 731 LDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMME--EKGCKPNVVTY 788

Query: 549 SIVVDLLAKDEKYHEC 564
           + ++D   K  K  +C
Sbjct: 789 TAMIDGFGKAGKVDKC 804



 Score =  115 bits (289), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 98/426 (23%), Positives = 164/426 (38%), Gaps = 82/426 (19%)

Query: 205 KEGLVDKAKELFL-EMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNL 263
           + G  D+  E FL E++G        +   LI   C  G W         + D G +P  
Sbjct: 182 ERGSYDRVPEEFLREIRGDDKEVLGKLLNVLIRKCCRNGLWNVALEELGRLKDFGYKPTR 241

Query: 264 LTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLS 323
           +T+N ++    +  K++ A  +   M + GL+ D FT        C VG+    RE    
Sbjct: 242 MTYNALVQVFLRADKLDTAQLVHREMSELGLSMDEFTLGFFAQALCKVGKW---REALSL 298

Query: 324 MHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQ 383
           +  +      + YN +I+G C+    EEAM    ++ S      V TY  LL G     Q
Sbjct: 299 IEKEDFVPNTILYNKMISGLCEASFFEEAMDFLNRMRSTSCIPNVQTYRILLCGCLNKKQ 358

Query: 384 AGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNC 443
            G  +++   M      P  + +N L+   CK++    A KL   +E  + + G  ++N 
Sbjct: 359 LGRCKRILSMMIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNI 418

Query: 444 LIDGLCKAGRL-----------------------------------------DNAWELFH 462
           LI  +C  G L                                         + A+++ H
Sbjct: 419 LIGSICSGGELPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIH 478

Query: 463 KLPQKGLVPTVVTYSIMIHGLC-----------------------------------RKG 487
           ++   G VP   TYS +I  LC                                   + G
Sbjct: 479 EMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAG 538

Query: 488 KLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTT 547
            +++A+++L  M ++GC P VVT+ TL+H +L+  K S   EL   M    +   P+  T
Sbjct: 539 IIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMI--AKGCFPNVIT 596

Query: 548 FSIVVD 553
           ++ ++D
Sbjct: 597 YTALID 602


>gi|357167837|ref|XP_003581356.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Brachypodium distachyon]
          Length = 524

 Score =  208 bits (530), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 143/483 (29%), Positives = 228/483 (47%), Gaps = 36/483 (7%)

Query: 66  MTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGL----------------LPD 109
           + H+  +P +   +LL  A    R +   +S Y +L S+ L                 P 
Sbjct: 43  LPHLAATPSLP--HLLLTASVAGRPHTTSLSLYSRLKSLSLPIPTASLHPLLSSLPPAPA 100

Query: 110 F--------LTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLING 161
           F        L L +    F    R LC   +   A  L + M +    P+ +TY T+I G
Sbjct: 101 FVLFADIFRLRLPLSTTTFNIMLRHLCTAGKPVRALELLRQMPS----PNAVTYNTVIAG 156

Query: 162 FCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKG 221
           FC  G +   + + ++M     E G I+  + ++Y+ +I   CK G V+ A ++F EM  
Sbjct: 157 FCARGRVQAGIEIMREM----RERGGIAP-DKYTYATVISGWCKVGKVEDATKVFDEMLT 211

Query: 222 RG-INPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKIN 280
            G + P  V+   LI G+C  GN E       EM+D G    + T+N+ +  L   G+  
Sbjct: 212 EGKVEPNAVMYNALIGGYCDQGNLEVALRYRGEMVDRGVSMTVATYNLFVHTLFMEGRAA 271

Query: 281 EANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILI 340
           EA+ L+E M ++GL PD FTYN L++GYC  G+   A ++F  M  KG + TVV+Y  LI
Sbjct: 272 EAHALVEEMGEKGLAPDAFTYNILINGYCKEGKEKKAMKMFEVMVGKGIRATVVTYTSLI 331

Query: 341 NGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVE 400
           +       V+E   L+   +  G+R  +  YN L++     G    A ++  EM+   + 
Sbjct: 332 HALSMKGMVQETDRLFNDAVRRGIRPDLFMYNALINSHCTGGDMDRAFEIMGEMEKKRIT 391

Query: 401 PDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWEL 460
           PD  TYN L+ GLC    + EA  L   +     +  +  +N LI G    G + +A ++
Sbjct: 392 PDDVTYNTLMRGLCLLGRLDEARGLIEEMTKRGIQPDLVSYNTLISGYSMKGDIKDAVKV 451

Query: 461 FHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQ 520
             ++  KG  PT++TY+ MI GLC  G+   A D +  M  NG  P+  T+ +L+ G   
Sbjct: 452 RDEMMGKGFNPTLLTYNAMIKGLCLNGQGGDAEDLVKEMVGNGITPDDSTYISLIEGLTT 511

Query: 521 NNK 523
            ++
Sbjct: 512 EDE 514



 Score = 48.1 bits (113), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 31/108 (28%), Positives = 47/108 (43%), Gaps = 7/108 (6%)

Query: 55  NLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLN 114
            L+EAR     MT     P + S+N L    +        +    +++  G  P  LT N
Sbjct: 409 RLDEARGLIEEMTKRGIQPDLVSYNTLISGYSMKGDIKDAVKVRDEMMGKGFNPTLLTYN 468

Query: 115 ILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGF 162
            +I       +GLC+  +  +A  L K M+  G+ PD  TY +LI G 
Sbjct: 469 AMI-------KGLCLNGQGGDAEDLVKEMVGNGITPDDSTYISLIEGL 509


>gi|359489321|ref|XP_002269223.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Vitis vinifera]
          Length = 889

 Score =  208 bits (530), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 150/525 (28%), Positives = 251/525 (47%), Gaps = 30/525 (5%)

Query: 41  LNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRK 100
            N  ++  CK G  N+ EAR  F  +  M  SP    +N L     K R  D     Y +
Sbjct: 339 FNTVINAFCKEG--NVVEARKLFDGLKEMGFSPNAIMYNTLMNGYVKMREIDQANMLYEE 396

Query: 101 LVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLIN 160
           +   G+ PD +T NIL++  G+ + G     R ++   L K++   G+ PD   +   ++
Sbjct: 397 MRKKGIAPDGITFNILVS--GHYKYG-----REEDGDRLLKDISVLGLLPDRSLFDISVS 449

Query: 161 GFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMK 220
           G C  G L  A+     M+    E GL    +I +++ +I +  + GL DKA E +  M 
Sbjct: 450 GLCWAGRLDEAMEFLMDML----EKGL--SPSIIAFNSVIAAYSQAGLEDKAFEAYKLMV 503

Query: 221 GRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKIN 280
             G+ P+   C++L+ G    G  +E   L  +M++ G   N + F V++D   K G + 
Sbjct: 504 HFGLTPSPSTCSSLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVV 563

Query: 281 EANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILI 340
            A  L   M +RG+ PD   +++ +DG    G ++ A  +FL M  KG      +YN LI
Sbjct: 564 GAQSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLI 623

Query: 341 NGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVE 400
            G+CK   + EA+ L + +   G+   + T N ++ GL + G+   A  +F +M    + 
Sbjct: 624 CGFCKCGKLNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMDMHQTGLS 683

Query: 401 PDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWEL 460
           PD+ TYN LI+G CK   +  A  L + +  +     +  +N  I G C + R++ A  +
Sbjct: 684 PDIITYNTLINGYCKAFDMVNADNLVNRMYASGSNPDLTTYNIRIHGFCSSRRMNRAVLM 743

Query: 461 FHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQ 520
             +L   G+VP  VTY+ M++G+C    L++A      + K    PNVVT N L+  F +
Sbjct: 744 LDELVSAGIVPNTVTYNSMLNGVC-SDILDRAMILTARLLKMAFVPNVVTANLLLSQFYK 802

Query: 521 NNKTSKVVELLHKMAEPERNLVP---DDTTFSIVVDLLAKDEKYH 562
                + +   HK++E     +P   D+ T+ I+      D+ +H
Sbjct: 803 QGMPERTLMWGHKLSE-----IPYAFDEITYKIM------DKAHH 836



 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 146/537 (27%), Positives = 250/537 (46%), Gaps = 64/537 (11%)

Query: 58  EARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILI 117
           +A    G M  +   P  S   +LF  + +   Y  V   ++ ++  G  P   T + +I
Sbjct: 214 QALEILGRMREVGVRPSASGVAILFKLLLRVGDYGNVWKLFKDVIRRGPQPCKYTFSGII 273

Query: 118 NCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKK 177
                   G C +  I     L   M  F   P+   Y  +IN  C  G  S AL     
Sbjct: 274 -------LGFCRKGCIHLGESLLHLMPKFHCEPNAFAYNIVINACCIRGRTSDALAWFNL 326

Query: 178 MVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHG 237
           M+    E G      + +++ +I++ CKEG V +A++LF  +K  G +P  ++  TL++G
Sbjct: 327 MI----ERG--CNPTVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYNTLMNG 380

Query: 238 FCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPD 297
           +      ++ N L+ EM   G  P+ +TFN+++    K G+  + + LL+ +   GL PD
Sbjct: 381 YVKMREIDQANMLYEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVLGLLPD 440

Query: 298 RFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGY-------------- 343
           R  ++  + G C  GR+D A E  + M  KG   +++++N +I  Y              
Sbjct: 441 RSLFDISVSGLCWAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYK 500

Query: 344 -------------CKIL--------NVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAG 382
                        C  L         ++EA  L  Q+I  G+    + +  LL   F+ G
Sbjct: 501 LMVHFGLTPSPSTCSSLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLDKFFKRG 560

Query: 383 QAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM-------NKFE 435
               AQ L+ EM+   + PD+  ++  IDGL K   V+EA  +F  LEM       N F 
Sbjct: 561 DVVGAQSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVF--LEMLRKGLIPNNFA 618

Query: 436 FGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDF 495
                +N LI G CK G+L+ A +L   +  +GL+P + T +++I GLC++G++  A + 
Sbjct: 619 -----YNSLICGFCKCGKLNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINV 673

Query: 496 LLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVV 552
            + M + G +P+++T+NTL++G+ +         L+++M     N  PD TT++I +
Sbjct: 674 FMDMHQTGLSPDIITYNTLINGYCKAFDMVNADNLVNRMYASGSN--PDLTTYNIRI 728



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 137/516 (26%), Positives = 255/516 (49%), Gaps = 29/516 (5%)

Query: 49  CKSGIINLNEARYFFGYMTHMQP----SPPISSFNLLFGAVA-KNRHYDAVISFYRKLVS 103
           C+ G I+L E+      + H+ P     P   ++N++  A   + R  DA ++++  ++ 
Sbjct: 277 CRKGCIHLGES------LLHLMPKFHCEPNAFAYNIVINACCIRGRTSDA-LAWFNLMIE 329

Query: 104 IGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFC 163
            G  P  +T N +IN F       C E  + EA  LF  +   G  P+ I Y TL+NG+ 
Sbjct: 330 RGCNPTVVTFNTVINAF-------CKEGNVVEARKLFDGLKEMGFSPNAIMYNTLMNGYV 382

Query: 164 RTGNLSVALRLHKKMVS-GDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGR 222
           +   +  A  L+++M   G   +G+       +++I++    K G  +    L  ++   
Sbjct: 383 KMREIDQANMLYEEMRKKGIAPDGI-------TFNILVSGHYKYGREEDGDRLLKDISVL 435

Query: 223 GINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEA 282
           G+ P   +    + G C AG  +E     ++ML+ G  P+++ FN +I    + G  ++A
Sbjct: 436 GLLPDRSLFDISVSGLCWAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKA 495

Query: 283 NGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILING 342
               +LM+  GL P   T +SL+ G  + GR+  A E+   M  KG     +++ +L++ 
Sbjct: 496 FEAYKLMVHFGLTPSPSTCSSLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLDK 555

Query: 343 YCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPD 402
           + K  +V  A SL+ ++   G+   V+ ++  + GL + G    A  +F EM    + P+
Sbjct: 556 FFKRGDVVGAQSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPN 615

Query: 403 LSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFH 462
              YN LI G CK   + EA+KL  ++        I   N +I GLCK GR+ +A  +F 
Sbjct: 616 NFAYNSLICGFCKCGKLNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFM 675

Query: 463 KLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNN 522
            + Q GL P ++TY+ +I+G C+   +  A++ +  M  +G  P++ T+N  +HGF  + 
Sbjct: 676 DMHQTGLSPDIITYNTLINGYCKAFDMVNADNLVNRMYASGSNPDLTTYNIRIHGFCSSR 735

Query: 523 KTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKD 558
           + ++ V +L ++      +VP+  T++ +++ +  D
Sbjct: 736 RMNRAVLMLDELVSA--GIVPNTVTYNSMLNGVCSD 769


>gi|242043130|ref|XP_002459436.1| hypothetical protein SORBIDRAFT_02g004626 [Sorghum bicolor]
 gi|241922813|gb|EER95957.1| hypothetical protein SORBIDRAFT_02g004626 [Sorghum bicolor]
          Length = 684

 Score =  208 bits (530), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 145/517 (28%), Positives = 241/517 (46%), Gaps = 56/517 (10%)

Query: 72  SPPISSFNLLFGAVAK-NRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVE 130
           +P   S+N +   +A+ + H DA++  YR+++   + P   T       FG   R LC  
Sbjct: 142 TPSFRSYNAVLSTLARADCHADALL-LYRRMLRDRVPPTTFT-------FGVAARALCRL 193

Query: 131 NRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISK 190
            R ++A  L + M   G  PD + Y T+I+     G ++ A  L  +M+      G  + 
Sbjct: 194 GRARDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAATLLDEMLL----MGCAAD 249

Query: 191 TNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGL 250
            N F+  ++   LC  G V +A  L   M   G  P+VV    L+ G C     +E    
Sbjct: 250 VNTFNDVVL--GLCGLGHVREAARLVDRMMMHGCTPSVVTYGFLLRGLCRTRQADEA--- 304

Query: 251 FIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCL 310
              ML   P  N++  N +I      GK+  A  L E+M  +G  PD  TYN LM G C 
Sbjct: 305 -YAMLGRVPEVNVVMLNTVIRGCLAEGKLARATELYEMMGSKGCPPDVHTYNILMHGLCK 363

Query: 311 VGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVIT 370
           +GR  +A  +   M  KGC   +V+Y+ L++ +C+    ++A ++  Q+ + G       
Sbjct: 364 LGRCGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMSAKGFSMNSQG 423

Query: 371 YNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLF---- 426
           YN ++  L + G+   A +L  EMK    +PD+ TYN +I  LC N+ + EA  +F    
Sbjct: 424 YNGIIYALGKDGKLDEAMRLVQEMKSQGCKPDICTYNTIIYHLCNNDQMDEAEHIFGNLL 483

Query: 427 ----------------HMLEMNKFEFGIEI---------------FNCLIDGLCKAGRLD 455
                            +L   +++ G+ +               +N LI  LCK G +D
Sbjct: 484 EEGVVANGITYNTLIHALLHSGRWQEGLRLANEMVLHGCPLDVVSYNGLIKALCKEGNVD 543

Query: 456 NAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLM 515
            +  L  ++  KG+ P   +Y+++I+ LC+ GK+  A +    M   G  P++VT+NTL+
Sbjct: 544 RSMMLLEEMMTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLI 603

Query: 516 HGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVV 552
           +G  +   T   + LL K+  P  N+ PD  T++I++
Sbjct: 604 NGLCKVGWTHAALNLLEKL--PNENVHPDIVTYNILI 638



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 123/430 (28%), Positives = 209/430 (48%), Gaps = 25/430 (5%)

Query: 117 INCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHK 176
           +N F +   GLC    ++EA  L   M+  G  P V+TYG L+ G CRT     A  +  
Sbjct: 250 VNTFNDVVLGLCGLGHVREAARLVDRMMMHGCTPSVVTYGFLLRGLCRTRQADEAYAMLG 309

Query: 177 KM-----------VSGDYENGLISKT--------------NIFSYSIIIDSLCKEGLVDK 211
           ++           + G    G +++               ++ +Y+I++  LCK G    
Sbjct: 310 RVPEVNVVMLNTVIRGCLAEGKLARATELYEMMGSKGCPPDVHTYNILMHGLCKLGRCGS 369

Query: 212 AKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMID 271
           A  +  EM+ +G  P +V  +TL+H FC  G W++   +  +M   G   N   +N +I 
Sbjct: 370 AVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMSAKGFSMNSQGYNGIIY 429

Query: 272 CLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKH 331
            L K GK++EA  L++ M  +G  PD  TYN+++   C   ++D A  IF ++  +G   
Sbjct: 430 ALGKDGKLDEAMRLVQEMKSQGCKPDICTYNTIIYHLCNNDQMDEAEHIFGNLLEEGVVA 489

Query: 332 TVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLF 391
             ++YN LI+        +E + L  +++ +G    V++YN L+  L + G    +  L 
Sbjct: 490 NGITYNTLIHALLHSGRWQEGLRLANEMVLHGCPLDVVSYNGLIKALCKEGNVDRSMMLL 549

Query: 392 DEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKA 451
           +EM    ++P+  +YN+LI+ LCK   V++A++L   +        I  +N LI+GLCK 
Sbjct: 550 EEMMTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKV 609

Query: 452 GRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTF 511
           G    A  L  KLP + + P +VTY+I+I   C+   L+ A+  L      G  PN  T+
Sbjct: 610 GWTHAALNLLEKLPNENVHPDIVTYNILISWHCKVRLLDDASMLLDKAVSGGIVPNERTW 669

Query: 512 NTLMHGFLQN 521
             ++  F++ 
Sbjct: 670 GMMVQNFVRQ 679



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 130/468 (27%), Positives = 215/468 (45%), Gaps = 30/468 (6%)

Query: 32  AAVSSPETQLNEFLHENCKS-------------GIINLNEARYFFGYMTHMQPSPPISSF 78
             V+   T L+E L   C +             G+ ++ EA      M     +P + ++
Sbjct: 229 GGVAEAATLLDEMLLMGCAADVNTFNDVVLGLCGLGHVREAARLVDRMMMHGCTPSVVTY 288

Query: 79  NLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATW 138
             L   + + R  D   +   ++  +    + + LN +I       RG   E ++  AT 
Sbjct: 289 GFLLRGLCRTRQADEAYAMLGRVPEV----NVVMLNTVI-------RGCLAEGKLARATE 337

Query: 139 LFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSI 198
           L++ M + G  PDV TY  L++G C+ G    A+R+  +M     E G     NI +YS 
Sbjct: 338 LYEMMGSKGCPPDVHTYNILMHGLCKLGRCGSAVRMLDEM----EEKG--CAPNIVTYST 391

Query: 199 IIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLG 258
           ++ S C+ G+ D A+ +  +M  +G +        +I+     G  +E   L  EM   G
Sbjct: 392 LLHSFCRNGMWDDARAMLDQMSAKGFSMNSQGYNGIIYALGKDGKLDEAMRLVQEMKSQG 451

Query: 259 PRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAR 318
            +P++ T+N +I  LC   +++EA  +   +++ G+  +  TYN+L+      GR     
Sbjct: 452 CKPDICTYNTIIYHLCNNDQMDEAEHIFGNLLEEGVVANGITYNTLIHALLHSGRWQEGL 511

Query: 319 EIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGL 378
            +   M   GC   VVSYN LI   CK  NV+ +M L  ++++ G++    +YN L++ L
Sbjct: 512 RLANEMVLHGCPLDVVSYNGLIKALCKEGNVDRSMMLLEEMMTKGIKPNNFSYNMLINEL 571

Query: 379 FQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGI 438
            +AG+   A +L  EM    + PD+ TYN LI+GLCK      A+ L   L        I
Sbjct: 572 CKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKVGWTHAALNLLEKLPNENVHPDI 631

Query: 439 EIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRK 486
             +N LI   CK   LD+A  L  K    G+VP   T+ +M+    R+
Sbjct: 632 VTYNILISWHCKVRLLDDASMLLDKAVSGGIVPNERTWGMMVQNFVRQ 679



 Score =  145 bits (365), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 92/320 (28%), Positives = 150/320 (46%), Gaps = 11/320 (3%)

Query: 249 GLFIEMLDLGPR-----PNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNS 303
           G  + +LD  PR     P+  ++N ++  L +     +A  L   M++  + P  FT+  
Sbjct: 126 GRALHLLDQMPRRFAVTPSFRSYNAVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGV 185

Query: 304 LMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNG 363
                C +GR   A  +   M   GC    V Y  +I+       V EA +L  +++  G
Sbjct: 186 AARALCRLGRARDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAATLLDEMLLMG 245

Query: 364 VRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAV 423
               V T+N ++ GL   G    A +L D M ++   P + TY  L+ GLC+     EA 
Sbjct: 246 CAADVNTFNDVVLGLCGLGHVREAARLVDRMMMHGCTPSVVTYGFLLRGLCRTRQADEAY 305

Query: 424 KLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGL 483
            +   +     E  + + N +I G    G+L  A EL+  +  KG  P V TY+I++HGL
Sbjct: 306 AMLGRVP----EVNVVMLNTVIRGCLAEGKLARATELYEMMGSKGCPPDVHTYNILMHGL 361

Query: 484 CRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVP 543
           C+ G+   A   L  ME+ GCAPN+VT++TL+H F +N        +L +M+   +    
Sbjct: 362 CKLGRCGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMS--AKGFSM 419

Query: 544 DDTTFSIVVDLLAKDEKYHE 563
           +   ++ ++  L KD K  E
Sbjct: 420 NSQGYNGIIYALGKDGKLDE 439



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 90/369 (24%), Positives = 167/369 (45%), Gaps = 6/369 (1%)

Query: 195 SYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEM 254
           SY+ ++ +L +      A  L+  M    + P            C  G   +   L   M
Sbjct: 147 SYNAVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVAARALCRLGRARDALALLRGM 206

Query: 255 LDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRI 314
              G  P+ + +  +I  L   G + EA  LL+ M+  G   D  T+N ++ G C +G +
Sbjct: 207 ARHGCVPDAVLYQTVIHALVAQGGVAEAATLLDEMLLMGCAADVNTFNDVVLGLCGLGHV 266

Query: 315 DTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTL 374
             A  +   M   GC  +VV+Y  L+ G C+    +EA ++  ++        V+  NT+
Sbjct: 267 REAARLVDRMMMHGCTPSVVTYGFLLRGLCRTRQADEAYAMLGRV----PEVNVVMLNTV 322

Query: 375 LSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKF 434
           + G    G+   A +L++ M      PD+ TYNIL+ GLCK      AV++   +E    
Sbjct: 323 IRGCLAEGKLARATELYEMMGSKGCPPDVHTYNILMHGLCKLGRCGSAVRMLDEMEEKGC 382

Query: 435 EFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKAND 494
              I  ++ L+   C+ G  D+A  +  ++  KG       Y+ +I+ L + GKL++A  
Sbjct: 383 APNIVTYSTLLHSFCRNGMWDDARAMLDQMSAKGFSMNSQGYNGIIYALGKDGKLDEAMR 442

Query: 495 FLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDL 554
            +  M+  GC P++ T+NT+++    N++  +   +   +   E  +V +  T++ ++  
Sbjct: 443 LVQEMKSQGCKPDICTYNTIIYHLCNNDQMDEAEHIFGNLL--EEGVVANGITYNTLIHA 500

Query: 555 LAKDEKYHE 563
           L    ++ E
Sbjct: 501 LLHSGRWQE 509


>gi|414586743|tpg|DAA37314.1| TPA: hypothetical protein ZEAMMB73_981845 [Zea mays]
          Length = 524

 Score =  208 bits (530), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 140/498 (28%), Positives = 233/498 (46%), Gaps = 28/498 (5%)

Query: 66  MTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKER 125
           + H+  SP +   +LL  A A  R +   +  Y +L S+ +     +L+ L++   +   
Sbjct: 43  LPHLSASPSLP--HLLLTASAAARPHATSLRLYAQLKSLSVPIPVASLHPLLSSLPSAP- 99

Query: 126 GLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYEN 185
                     A  LF ++    +     T+  ++   C TG    AL L ++M       
Sbjct: 100 ----------AFALFADIYRLRLPLCTTTFNIMLRHLCATGKPVRALELLRQM------- 142

Query: 186 GLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRG-INPAVVVCTTLIHGFCCAGNW 244
               + N  +Y+ +I   C  G V  A E+  EM+ RG I P      TLI G+C  G  
Sbjct: 143 ---PRPNAVTYNTVIAGFCARGRVQAALEVMREMRERGGIAPDKYTYATLISGWCKIGRM 199

Query: 245 EEVNGLFIEMLDLGP-RPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNS 303
           E+   +F EML  G   P+ + +N +I   C  GK++ A    E M+QRG+     TYN 
Sbjct: 200 EDAVKVFDEMLTKGEVAPSAVMYNALIGGYCDVGKLDVALQYREDMVQRGIAMTVATYNL 259

Query: 304 LMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNG 363
           LM    +  R   A  +   M   G    V +YNILINGYCK  N ++A+ ++ ++   G
Sbjct: 260 LMHALFMDARASDAYAVLEEMQKNGFSPDVFTYNILINGYCKEGNEKKALEVFEEMSQKG 319

Query: 364 VRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAV 423
           VR T +TY +L+    + GQ     +LF+      + PD+  YN LI+  C    ++ A 
Sbjct: 320 VRATAVTYTSLIYVFSRKGQVQETDRLFNVAVKKGIRPDVVMYNALINSHCTGGDMERAY 379

Query: 424 KLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGL 483
           ++   +E  +       +N L+ G C  GRLD A  L  ++ ++G+ P +V+Y+ +I G 
Sbjct: 380 EIMAEMEKKRIPPDDMTYNTLMRGFCLLGRLDEARTLIDEMTKRGIQPDLVSYNTLISGY 439

Query: 484 CRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVP 543
             KG ++ A      M   G  P ++T+N L+ G  +  +      L+ +M    + + P
Sbjct: 440 SMKGDIKDALRVRDEMMDKGFNPTLMTYNALIQGLCKIRQGDDAENLMKEMV--AKGITP 497

Query: 544 DDTTF-SIVVDLLAKDEK 560
           DD+T+ S++  L  +DE+
Sbjct: 498 DDSTYISLIEGLTTEDER 515



 Score = 47.8 bits (112), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 47/108 (43%), Gaps = 7/108 (6%)

Query: 55  NLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLN 114
            L+EAR     MT     P + S+N L    +        +    +++  G  P  +T N
Sbjct: 409 RLDEARTLIDEMTKRGIQPDLVSYNTLISGYSMKGDIKDALRVRDEMMDKGFNPTLMTYN 468

Query: 115 ILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGF 162
            LI       +GLC   +  +A  L K M+A G+ PD  TY +LI G 
Sbjct: 469 ALI-------QGLCKIRQGDDAENLMKEMVAKGITPDDSTYISLIEGL 509


>gi|215768057|dbj|BAH00286.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 506

 Score =  208 bits (530), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 138/489 (28%), Positives = 230/489 (47%), Gaps = 15/489 (3%)

Query: 58  EARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILI 117
           +A   F  MT     P   ++N +     K    +A      ++V  GL P+ +T N+L+
Sbjct: 33  DAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLL 92

Query: 118 NCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKK 177
           +       GLC   R+ E + L   M +  + PD  TY  L +G  R G+    L L  K
Sbjct: 93  S-------GLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGK 145

Query: 178 MVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHG 237
            +    +NG+      ++ SI+++ LCK+G V  A+E+   +   G+ P  V+  TLI+G
Sbjct: 146 YL----KNGVT--IGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLING 199

Query: 238 FCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPD 297
           +C  G  E     F +M     +P+ +T+N +I+ LCK  +I  A  LL  M   G+NP 
Sbjct: 200 YCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPT 259

Query: 298 RFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYR 357
             T+N+L+D Y   G+++    +   M   G K  VVSY  ++N +CK   + EA+++  
Sbjct: 260 VETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILD 319

Query: 358 QIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNN 417
            +    V      YN ++    + G    A  L ++MK   + P + TYN+LI GLC  +
Sbjct: 320 DMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQS 379

Query: 418 CVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYS 477
            + EA ++ + L  ++       +N LI   C  G +D A +L  ++ + G+  TV TY 
Sbjct: 380 QISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYH 439

Query: 478 IMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEP 537
            +I GL   G+L +       M +N   P+    N ++  + +     K  +L  +M + 
Sbjct: 440 QLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQK 499

Query: 538 ERNLVPDDT 546
             N   DDT
Sbjct: 500 RNN--HDDT 506



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 122/427 (28%), Positives = 217/427 (50%), Gaps = 13/427 (3%)

Query: 108 PDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGN 167
           P+  + N++I        G+    R  +A  +F  M    V P+ ITY T+I+G  + G+
Sbjct: 13  PNAFSYNVVI-------AGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGD 65

Query: 168 LSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPA 227
           L    RL  +MV     +GL  K N  +Y++++  LC+ G + +   L  EM  + + P 
Sbjct: 66  LEAGFRLRDQMVC----HGL--KPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPD 119

Query: 228 VVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLE 287
               + L  G    G+ + +  LF + L  G      T +++++ LCK GK++ A  +L+
Sbjct: 120 GFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQ 179

Query: 288 LMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKIL 347
            ++  GL P R  YN+L++GYC  G ++ A   F  M S+  K   ++YN LING CK  
Sbjct: 180 SLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAE 239

Query: 348 NVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYN 407
            +  A  L  ++  NGV  TV T+NTL+    + GQ      +  EM+   ++P++ +Y 
Sbjct: 240 RITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYG 299

Query: 408 ILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQK 467
            +++  CKN  + EAV +   +         +++N +ID   + G  D A+ L  K+   
Sbjct: 300 SIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSN 359

Query: 468 GLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKV 527
           G+ P++VTY+++I GLC + ++ +A + +  +  +   P+ V++NTL+          K 
Sbjct: 360 GISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKA 419

Query: 528 VELLHKM 534
           ++L  +M
Sbjct: 420 LDLQQRM 426



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 110/379 (29%), Positives = 190/379 (50%), Gaps = 2/379 (0%)

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
           N FSY+++I  + + G    A E+F EM  R + P  +   T+I G    G+ E    L 
Sbjct: 14  NAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLR 73

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
            +M+  G +PN +T+NV++  LC+ G++ E + LL+ M  + + PD FTY+ L DG    
Sbjct: 74  DQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRN 133

Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
           G       +F      G      + +IL+NG CK   V  A  + + +++ G+  T + Y
Sbjct: 134 GDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIY 193

Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
           NTL++G  Q G+   A   F +MK  +++PD  TYN LI+GLCK   +  A  L   ++ 
Sbjct: 194 NTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQD 253

Query: 432 NKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEK 491
           N     +E FN LID   + G+L+  + +  ++ + GL P VV+Y  +++  C+ GK+ +
Sbjct: 254 NGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPE 313

Query: 492 ANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIV 551
           A   L  M      PN   +N ++  ++++    +   L+ KM      + P   T++++
Sbjct: 314 AVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMK--SNGISPSIVTYNLL 371

Query: 552 VDLLAKDEKYHECSAVSKS 570
           +  L    +  E   +  S
Sbjct: 372 IKGLCNQSQISEAEEIINS 390



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 119/447 (26%), Positives = 208/447 (46%), Gaps = 50/447 (11%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           C++G   + E       M   +  P   ++++LF  +++N    A++S + K +  G+  
Sbjct: 96  CRAG--RMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTI 153

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
              T +IL+N       GLC + ++  A  + ++++  G+ P  + Y TLING+C+TG L
Sbjct: 154 GDYTCSILLN-------GLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGEL 206

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
             A     +M S         K +  +Y+ +I+ LCK   +  A++L +EM+  G+NP V
Sbjct: 207 EGAFSTFGQMKSRHI------KPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTV 260

Query: 229 VVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLEL 288
               TLI  +   G  E+   +  EM + G +PN++++  +++  CK GKI EA  +L+ 
Sbjct: 261 ETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDD 320

Query: 289 MIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILN 348
           M  + + P+   YN+++D Y   G  D A  +   M S G   ++V+YN+LI G C    
Sbjct: 321 MFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQ 380

Query: 349 VEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNI 408
           + EA  +   + ++ +    ++YNTL+S     G    A  L   M  Y ++  + TY+ 
Sbjct: 381 ISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQ 440

Query: 409 LIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKG 468
           L                                   I GL  AGRL+    L+ K+ Q  
Sbjct: 441 L-----------------------------------ISGLGGAGRLNEMEYLYQKMMQNN 465

Query: 469 LVPTVVTYSIMIHGLCRKGKLEKANDF 495
           +VP+   ++IM+    + G   KA D 
Sbjct: 466 VVPSNAIHNIMVEAYSKYGNEIKAEDL 492



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 88/269 (32%), Positives = 142/269 (52%), Gaps = 2/269 (0%)

Query: 296 PDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSL 355
           P+ F+YN ++ G    GR   A E+F  M  +      ++YN +I+G+ K  ++E    L
Sbjct: 13  PNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRL 72

Query: 356 YRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCK 415
             Q++ +G++   ITYN LLSGL +AG+ G    L DEM    + PD  TY+IL DGL +
Sbjct: 73  RDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSR 132

Query: 416 NNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVT 475
           N   +  + LF     N    G    + L++GLCK G++  A E+   L   GLVPT V 
Sbjct: 133 NGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVI 192

Query: 476 YSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMA 535
           Y+ +I+G C+ G+LE A      M+     P+ +T+N L++G  +  + +   +LL +M 
Sbjct: 193 YNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQ 252

Query: 536 EPERNLVPDDTTFSIVVDLLAKDEKYHEC 564
           +   N  P   TF+ ++D   +  +  +C
Sbjct: 253 DNGVN--PTVETFNTLIDAYGRTGQLEKC 279



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 89/312 (28%), Positives = 160/312 (51%), Gaps = 2/312 (0%)

Query: 256 DLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRID 315
           D  P PN  ++NV+I  + + G+  +A  + + M +R + P+  TYN+++DG+   G ++
Sbjct: 8   DGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLE 67

Query: 316 TAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLL 375
               +   M   G K   ++YN+L++G C+   + E  +L  ++ S  +     TY+ L 
Sbjct: 68  AGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILF 127

Query: 376 SGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFE 435
            GL + G +     LF +     V     T +IL++GLCK+  V  A ++   L      
Sbjct: 128 DGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLV 187

Query: 436 FGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDF 495
               I+N LI+G C+ G L+ A+  F ++  + + P  +TY+ +I+GLC+  ++  A D 
Sbjct: 188 PTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDL 247

Query: 496 LLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLL 555
           L+ M+ NG  P V TFNTL+  + +  +  K   +L +M   E  L P+  ++  +V+  
Sbjct: 248 LMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQ--ENGLKPNVVSYGSIVNAF 305

Query: 556 AKDEKYHECSAV 567
            K+ K  E  A+
Sbjct: 306 CKNGKIPEAVAI 317


>gi|302806555|ref|XP_002985027.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
 gi|300147237|gb|EFJ13902.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
          Length = 443

 Score =  208 bits (530), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 135/419 (32%), Positives = 208/419 (49%), Gaps = 15/419 (3%)

Query: 75  ISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIK 134
           I ++  +   +AKN+     ++   K+ + G  P   T N L+N       GLC   R++
Sbjct: 34  IHTYTTIVDWLAKNKKIQEAVALMEKITANGCTPTIATYNALLN-------GLCKMGRLE 86

Query: 135 EATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIF 194
           EA  L + ++  G  PDV+TY +LI+G  +      A +L K+M S     GL   T   
Sbjct: 87  EAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRSFEAYKLFKEMAS----RGLALDT--V 140

Query: 195 SYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEM 254
            Y+ +I  L + G + +A  ++  M  +G  P VV  +T+I G C AG       +F  M
Sbjct: 141 CYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSM 200

Query: 255 LDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRI 314
              G  PN + ++ +I  LCK  K++ A  +L  M +    PD  TYN L+DG C  G +
Sbjct: 201 EARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDV 260

Query: 315 DTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTL 374
             AR  F  M   GCK  V +YNILI+G+CK  N + A  ++  + S+     V+TY TL
Sbjct: 261 AAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSPNVVTYGTL 320

Query: 375 LSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKF 434
           +SGL +  Q   A   +  MK     PD   Y+ L+DGLCK+  ++    LF  +E +  
Sbjct: 321 ISGLCKRRQLTKASLYYQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSGV 380

Query: 435 EFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKAN 493
               +    LI  LCKA R+D A  LF+ + ++G+ P    Y+ +I  L + GK+ +  
Sbjct: 381 A-NSQTRTRLIFHLCKANRVDEAVSLFNAIRKEGM-PHPYAYNSIISALIKSGKVNEGQ 437



 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 132/426 (30%), Positives = 207/426 (48%), Gaps = 20/426 (4%)

Query: 39  TQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFY 98
           T + ++L +N K     + EA      +T    +P I+++N L   + K    +  I   
Sbjct: 38  TTIVDWLAKNKK-----IQEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLL 92

Query: 99  RKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTL 158
           RK+V  G  PD +T   LI+  G K+R         EA  LFK M + G+  D + Y  L
Sbjct: 93  RKIVDNGCTPDVVTYTSLIDGLGKKKRSF-------EAYKLFKEMASRGLALDTVCYTAL 145

Query: 159 INGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLE 218
           I G  + G +  A  ++K M S     G +   ++ + S +ID LCK G +  A  +F  
Sbjct: 146 IRGLLQAGKIPQASSVYKTMTS----QGCVP--DVVTLSTMIDGLCKAGRIGAAVRIFKS 199

Query: 219 MKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGK 278
           M+ RG+ P  VV + LIHG C A   +    +  +M      P+ +T+N++ID LCK G 
Sbjct: 200 MEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGD 259

Query: 279 INEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNI 338
           +  A    + M++ G  PD +TYN L+ G+C  G  D A  +F  M S  C   VV+Y  
Sbjct: 260 VAAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSPNVVTYGT 319

Query: 339 LINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYN 398
           LI+G CK   + +A   Y+ +   G       Y++L+ GL ++G+      LFDEM+   
Sbjct: 320 LISGLCKRRQLTKASLYYQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSG 379

Query: 399 VEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAW 458
           V  +  T   LI  LCK N V EAV LF+ +           +N +I  L K+G+++   
Sbjct: 380 V-ANSQTRTRLIFHLCKANRVDEAVSLFNAIRKEGMPHPYA-YNSIISALIKSGKVNEGQ 437

Query: 459 ELFHKL 464
            ++ ++
Sbjct: 438 AVYQEM 443



 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 135/456 (29%), Positives = 219/456 (48%), Gaps = 17/456 (3%)

Query: 112 TLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVA 171
           T +ILIN       GL     + +A  L +     G   D+ TY T+++   +   +  A
Sbjct: 1   TFSILIN-------GLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEA 53

Query: 172 LRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVC 231
           + L +K+ +    NG      I +Y+ +++ LCK G +++A +L  ++   G  P VV  
Sbjct: 54  VALMEKITA----NGCTP--TIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTY 107

Query: 232 TTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQ 291
           T+LI G        E   LF EM   G   + + +  +I  L + GKI +A+ + + M  
Sbjct: 108 TSLIDGLGKKKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTS 167

Query: 292 RGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEE 351
           +G  PD  T ++++DG C  GRI  A  IF SM ++G     V Y+ LI+G CK   ++ 
Sbjct: 168 QGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDC 227

Query: 352 AMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILID 411
           A+ +  Q+         ITYN L+ GL ++G    A+  FDEM     +PD+ TYNILI 
Sbjct: 228 ALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNILIS 287

Query: 412 GLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVP 471
           G CK      A  +F  +  ++    +  +  LI GLCK  +L  A   +  + ++G  P
Sbjct: 288 GFCKAGNTDAACGVFDDMSSSRCSPNVVTYGTLISGLCKRRQLTKASLYYQHMKERGCPP 347

Query: 472 TVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELL 531
               YS ++ GLC+ GKLE        ME++G A N  T   L+    + N+  + V L 
Sbjct: 348 DSFVYSSLVDGLCKSGKLEGGCMLFDEMERSGVA-NSQTRTRLIFHLCKANRVDEAVSLF 406

Query: 532 HKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAV 567
           + +    +  +P    ++ ++  L K  K +E  AV
Sbjct: 407 NAI---RKEGMPHPYAYNSIISALIKSGKVNEGQAV 439



 Score = 75.9 bits (185), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 58/223 (26%), Positives = 95/223 (42%), Gaps = 18/223 (8%)

Query: 33  AVSSPET-QLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHY 91
           A  +P+T   N  +   CKSG  ++  AR FF  M      P + ++N+L     K  + 
Sbjct: 238 AFCTPDTITYNILIDGLCKSG--DVAAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNT 295

Query: 92  DAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPD 151
           DA    +  + S    P+ +T   LI+       GLC   ++ +A+  +++M   G  PD
Sbjct: 296 DAACGVFDDMSSSRCSPNVVTYGTLIS-------GLCKRRQLTKASLYYQHMKERGCPPD 348

Query: 152 VITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDK 211
              Y +L++G C++G L     L  +M      N       IF        LCK   VD+
Sbjct: 349 SFVYSSLVDGLCKSGKLEGGCMLFDEMERSGVANSQTRTRLIF-------HLCKANRVDE 401

Query: 212 AKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEM 254
           A  LF  ++  G+ P      ++I     +G   E   ++ EM
Sbjct: 402 AVSLFNAIRKEGM-PHPYAYNSIISALIKSGKVNEGQAVYQEM 443


>gi|125590530|gb|EAZ30880.1| hypothetical protein OsJ_14954 [Oryza sativa Japonica Group]
          Length = 442

 Score =  208 bits (530), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 135/428 (31%), Positives = 211/428 (49%), Gaps = 16/428 (3%)

Query: 108 PDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGN 167
           P+  T N LI+        LC   ++++A  +  +M+  G  PDV+TY  L+   C+   
Sbjct: 5   PNAYTYNPLIH-------TLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRG 57

Query: 168 LSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPA 227
              A+ L   M +           N  +Y++++D +C EG VD A EL   +   G  P+
Sbjct: 58  YRQAMELIDLMRAEG------CTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPS 111

Query: 228 VVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLE 287
            V   T++ G C A  W + + L  EML     PN  TFNV+I  LC+ G + +A  LLE
Sbjct: 112 TVNYNTVLKGLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLE 171

Query: 288 LMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKIL 347
            M + G   +  TYN++++G C    +D A  +   M S GCK  +V+YN L+ G C   
Sbjct: 172 KMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAA 231

Query: 348 NVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYN 407
              +A  L   +  NG     +T+NTL+  L Q G    A ++F +M      P+  TY+
Sbjct: 232 RWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYS 291

Query: 408 ILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIE-IFNCLIDGLCKAGRLDNAWELFHKLPQ 466
            +I GL K   + +A++LF+  EM    F  + I+  L + L     ++ A +   KL  
Sbjct: 292 TIISGLAKATKLDQALELFN--EMGHKGFNPDKIYQLLAECLNDDDTIEEAIQTVRKLQD 349

Query: 467 KGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSK 526
            G+ P  V Y+ ++ GLCR GK E A D + YM  +GC P+ +T+  L+ G       ++
Sbjct: 350 SGISPHTVLYNAILLGLCRNGKTEFAIDIMAYMVSSGCMPDDLTYVILIEGLAYEGYLNE 409

Query: 527 VVELLHKM 534
             ELL K+
Sbjct: 410 ARELLIKL 417



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 100/340 (29%), Positives = 171/340 (50%), Gaps = 3/340 (0%)

Query: 224 INPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEAN 283
           + P       LIH  C  G   +   +  +ML  G  P+++T+N++++  CKG    +A 
Sbjct: 3   VQPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAM 62

Query: 284 GLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGY 343
            L++LM   G  P+  TYN LMDG C  G +D A E+  ++ S GCK + V+YN ++ G 
Sbjct: 63  ELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGL 122

Query: 344 CKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDL 403
           C      +A  L  +++         T+N ++  L + G    A +L ++M  +    ++
Sbjct: 123 CSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANI 182

Query: 404 STYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHK 463
            TYN +I+GLC+   V  A+ L   ++    +  I  +N L+ GLC A R  +A EL   
Sbjct: 183 VTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVDAEELMDN 242

Query: 464 LPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNK 523
           + Q G +P  VT++ +I  LC+KG +  A +    M   GC PN +T++T++ G  +  K
Sbjct: 243 MTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATK 302

Query: 524 TSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
             + +EL ++M     N    D  + ++ + L  D+   E
Sbjct: 303 LDQALELFNEMGHKGFN---PDKIYQLLAECLNDDDTIEE 339



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 114/458 (24%), Positives = 214/458 (46%), Gaps = 51/458 (11%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
           N  +H  C+ G   + +A      M     +P + ++N+L  A  K R Y   +     +
Sbjct: 11  NPLIHTLCERG--QVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAMELIDLM 68

Query: 102 VSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLING 161
            + G  P+ +T N+L++       G+C E  + +A  L +N+ + G +P  + Y T++ G
Sbjct: 69  RAEGCTPNNVTYNVLMD-------GMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKG 121

Query: 162 FCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKG 221
            C       A  L  +M+    EN      N  +++++I SLC++GL+ +A +L  +M  
Sbjct: 122 LCSAERWGDADELVTEMLR---EN---CPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSK 175

Query: 222 RGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINE 281
            G    +V    +I+G C   N +   GL  +M   G +P+++T+N ++  LC   +  +
Sbjct: 176 HGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVD 235

Query: 282 ANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILIN 341
           A  L++ M Q G  PD  T+N+L+   C  G +  A E+F  M  KGC    ++Y+ +I+
Sbjct: 236 AEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIIS 295

Query: 342 GYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEP 401
           G  K   +++A+                                   +LF+EM      P
Sbjct: 296 GLAKATKLDQAL-----------------------------------ELFNEMGHKGFNP 320

Query: 402 DLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELF 461
           D   Y +L + L  ++ ++EA++    L+ +       ++N ++ GLC+ G+ + A ++ 
Sbjct: 321 D-KIYQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNAILLGLCRNGKTEFAIDIM 379

Query: 462 HKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYM 499
             +   G +P  +TY I+I GL  +G L +A + L+ +
Sbjct: 380 AYMVSSGCMPDDLTYVILIEGLAYEGYLNEARELLIKL 417



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 81/290 (27%), Positives = 131/290 (45%), Gaps = 16/290 (5%)

Query: 38  ETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISF 97
           E   N  ++  C+ G+  L +A      M+    +  I ++N +   + + R+ D  +  
Sbjct: 147 EATFNVVIYSLCRKGL--LQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGL 204

Query: 98  YRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGT 157
             K+ S G  PD +T N L+       +GLC   R  +A  L  NM   G  PD +T+ T
Sbjct: 205 LSKMKSYGCKPDIVTYNTLL-------KGLCSAARWVDAEELMDNMTQNGCLPDNVTFNT 257

Query: 158 LINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFL 217
           LI   C+ G +  A+ + K+M             N  +YS II  L K   +D+A ELF 
Sbjct: 258 LIGFLCQKGLMVDAIEVFKQMPDKG------CTPNSITYSTIISGLAKATKLDQALELFN 311

Query: 218 EMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGG 277
           EM  +G NP  +    L          EE      ++ D G  P+ + +N ++  LC+ G
Sbjct: 312 EMGHKGFNPDKIY-QLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNAILLGLCRNG 370

Query: 278 KINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSK 327
           K   A  ++  M+  G  PD  TY  L++G    G ++ ARE+ + + S+
Sbjct: 371 KTEFAIDIMAYMVSSGCMPDDLTYVILIEGLAYEGYLNEARELLIKLCSR 420



 Score =  112 bits (280), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 79/292 (27%), Positives = 136/292 (46%), Gaps = 14/292 (4%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
           P  ++FN++  ++ +       I    K+   G   + +T N +IN       GLC +  
Sbjct: 145 PNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIIN-------GLCEQRN 197

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
           +  A  L   M ++G +PD++TY TL+ G C       A  L   M     +NG +    
Sbjct: 198 VDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVDAEELMDNMT----QNGCLPDN- 252

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
             +++ +I  LC++GL+  A E+F +M  +G  P  +  +T+I G   A   ++   LF 
Sbjct: 253 -VTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQALELFN 311

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
           EM   G  P+ + + ++ +CL     I EA   +  +   G++P    YN+++ G C  G
Sbjct: 312 EMGHKGFNPDKI-YQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNAILLGLCRNG 370

Query: 313 RIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGV 364
           + + A +I   M S GC    ++Y ILI G      + EA  L  ++ S  V
Sbjct: 371 KTEFAIDIMAYMVSSGCMPDDLTYVILIEGLAYEGYLNEARELLIKLCSRDV 422


>gi|297823043|ref|XP_002879404.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297325243|gb|EFH55663.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 605

 Score =  208 bits (529), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 134/438 (30%), Positives = 226/438 (51%), Gaps = 15/438 (3%)

Query: 63  FGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGN 122
           F YM     S    S  +   A  K R  D  + F+R++V  G+     +L I++     
Sbjct: 158 FDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEFFRRMVDSGVKITVYSLTIVVE---- 213

Query: 123 KERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGD 182
              GLC    ++++  L K     G++P+  TY T+IN + +  + S   ++ K M    
Sbjct: 214 ---GLCRRGEVEKSKKLIKEFSGKGIKPEAYTYNTIINAYLKHRDFSGVEKILKVM---- 266

Query: 183 YENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAG 242
            ++G++   N  +Y+++I+   K G ++  ++LF EM+ RGI   + V T+LI   C  G
Sbjct: 267 KKDGVV--YNKVTYTLLIELSVKNGKMNDVEKLFDEMRERGIESDIHVYTSLISWNCRKG 324

Query: 243 NWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYN 302
           N +    LF E+ + G  P+  T+  +ID +CK G++  A  L+  M  +G+N  +  +N
Sbjct: 325 NIKRAFLLFDELTEKGLLPSSHTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFN 384

Query: 303 SLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISN 362
           +L++GYC  G ID A  I+  M  KG +  V + N + + + ++   +EA     +++  
Sbjct: 385 TLINGYCRKGMIDEASMIYDVMEKKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEG 444

Query: 363 GVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEA 422
           GVR + ++Y  L+    + G    A++LF EM    V+P+  TYN++I   CK   V+EA
Sbjct: 445 GVRLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKEVQPNAITYNVMIYAYCKQGKVKEA 504

Query: 423 VKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHG 482
            KL+  ++ N  +     +  LI G C A  +D A  LF ++  KGL    VTY++MI G
Sbjct: 505 RKLWANMKANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISG 564

Query: 483 LCRKGKLEKANDFLLYME 500
           L + GK ++A  F LY E
Sbjct: 565 LSKAGKSDEA--FGLYDE 580



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 115/432 (26%), Positives = 212/432 (49%), Gaps = 10/432 (2%)

Query: 134 KEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNI 193
           +E   +F  M+  G+  D  +    +    +   + + L   ++MV    ++G+  K  +
Sbjct: 152 EEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEFFRRMV----DSGV--KITV 205

Query: 194 FSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIE 253
           +S +I+++ LC+ G V+K+K+L  E  G+GI P      T+I+ +    ++  V  +   
Sbjct: 206 YSLTIVVEGLCRRGEVEKSKKLIKEFSGKGIKPEAYTYNTIINAYLKHRDFSGVEKILKV 265

Query: 254 MLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGR 313
           M   G   N +T+ ++I+   K GK+N+   L + M +RG+  D   Y SL+   C  G 
Sbjct: 266 MKKDGVVYNKVTYTLLIELSVKNGKMNDVEKLFDEMRERGIESDIHVYTSLISWNCRKGN 325

Query: 314 IDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNT 373
           I  A  +F  +  KG   +  +Y  LI+G CK+  +  A  L  ++ S GV  T + +NT
Sbjct: 326 IKRAFLLFDELTEKGLLPSSHTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNT 385

Query: 374 LLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVK-LFHMLEMN 432
           L++G  + G    A  ++D M+    + D+ T N +     +     EA + LF M+E  
Sbjct: 386 LINGYCRKGMIDEASMIYDVMEKKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMME-G 444

Query: 433 KFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKA 492
                   +  LID  CK G ++ A  LF ++  K + P  +TY++MI+  C++GK+++A
Sbjct: 445 GVRLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKEVQPNAITYNVMIYAYCKQGKVKEA 504

Query: 493 NDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVV 552
                 M+ NG  P+  T+ +L+HG    +   + + L  +M    + L  +  T+++++
Sbjct: 505 RKLWANMKANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMG--LKGLDQNSVTYTVMI 562

Query: 553 DLLAKDEKYHEC 564
             L+K  K  E 
Sbjct: 563 SGLSKAGKSDEA 574



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 106/377 (28%), Positives = 190/377 (50%), Gaps = 15/377 (3%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVEN- 131
           P   ++N +  A  K+R +  V    + +   G++ + +T  +LI         L V+N 
Sbjct: 238 PEAYTYNTIINAYLKHRDFSGVEKILKVMKKDGVVYNKVTYTLLIE--------LSVKNG 289

Query: 132 RIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKT 191
           ++ +   LF  M   G+  D+  Y +LI+  CR GN+  A  L  ++     E GL+  +
Sbjct: 290 KMNDVEKLFDEMRERGIESDIHVYTSLISWNCRKGNIKRAFLLFDELT----EKGLLPSS 345

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
           +  +Y  +ID +CK G +  A+ L  EM+ +G+N   VV  TLI+G+C  G  +E + ++
Sbjct: 346 H--TYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLINGYCRKGMIDEASMIY 403

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
             M   G + ++ T N +  C  +  + +EA   L  M++ G+     +Y +L+D YC  
Sbjct: 404 DVMEKKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVRLSTVSYTNLIDVYCKE 463

Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
           G ++ A+ +F+ M SK  +   ++YN++I  YCK   V+EA  L+  + +NG+     TY
Sbjct: 464 GNVEEAKRLFVEMSSKEVQPNAITYNVMIYAYCKQGKVKEARKLWANMKANGMDPDSYTY 523

Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
            +L+ G   A     A +LF EM L  ++ +  TY ++I GL K     EA  L+  ++ 
Sbjct: 524 TSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEIKR 583

Query: 432 NKFEFGIEIFNCLIDGL 448
             +    +++  LI  +
Sbjct: 584 KGYTIDNKVYTALIGSM 600



 Score = 85.5 bits (210), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 82/372 (22%), Positives = 150/372 (40%), Gaps = 57/372 (15%)

Query: 202 SLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLG--P 259
           SL  +  +D  K  FL      + P +    TL H       + E+  L   +++ G   
Sbjct: 54  SLATQSCIDFFK--FLREFESNLKPDLTAVVTLSHRLYSNRRFSEMRLLLNSVVNDGFYE 111

Query: 260 RPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTARE 319
           RP     + M+DC     K        +L+ +                Y   G  +    
Sbjct: 112 RPVEGLGSAMVDCDISEEKFEFWEKFFDLVFRV---------------YVDNGMFEEGLR 156

Query: 320 IFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLF 379
           +F  M  KG      S  + +    K   ++  +  +R+++ +GV+ TV +   ++ GL 
Sbjct: 157 VFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEFFRRMVDSGVKITVYSLTIVVEGLC 216

Query: 380 QAGQAGYAQKLFDEMKLYNVEPDLSTYNILI---------------------DGL----- 413
           + G+   ++KL  E     ++P+  TYN +I                     DG+     
Sbjct: 217 RRGEVEKSKKLIKEFSGKGIKPEAYTYNTIINAYLKHRDFSGVEKILKVMKKDGVVYNKV 276

Query: 414 ---------CKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKL 464
                     KN  + +  KLF  +     E  I ++  LI   C+ G +  A+ LF +L
Sbjct: 277 TYTLLIELSVKNGKMNDVEKLFDEMRERGIESDIHVYTSLISWNCRKGNIKRAFLLFDEL 336

Query: 465 PQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQN--- 521
            +KGL+P+  TY  +I G+C+ G++  A   +  M+  G     V FNTL++G+ +    
Sbjct: 337 TEKGLLPSSHTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLINGYCRKGMI 396

Query: 522 NKTSKVVELLHK 533
           ++ S + +++ K
Sbjct: 397 DEASMIYDVMEK 408


>gi|224136366|ref|XP_002326842.1| predicted protein [Populus trichocarpa]
 gi|222835157|gb|EEE73592.1| predicted protein [Populus trichocarpa]
          Length = 726

 Score =  208 bits (529), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 137/485 (28%), Positives = 232/485 (47%), Gaps = 15/485 (3%)

Query: 66  MTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKER 125
           M H  P P   +FN +     +  H     S    +      PD    NILIN +     
Sbjct: 140 MIHQGPRPCNRNFNAVILGFCRKGHVKVGESLLCVMQKFKCQPDVYAYNILINAY----- 194

Query: 126 GLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYEN 185
             C   +  +A    + MI  G  P ++T+GT+IN FC  GN+  A    + +  G  E 
Sbjct: 195 --CTRGQTFDALGWMRFMIDNGCTPSLVTFGTVINAFCNQGNMMEA----RNLFDGMKEA 248

Query: 186 GLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWE 245
           G I   N+  Y+ +++   K   + +A  L+ EMK + + P       L+ G    G  E
Sbjct: 249 GHIP--NVVCYNTLMNGYVKARDIGQANMLYEEMKSKAVAPDCTTFNILVAGHYRYGREE 306

Query: 246 EVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLM 305
           + + L  ++   G       +N+ +  LC  G ++EA   LE M+++G+ P    +NS++
Sbjct: 307 DRDRLLRDLSQSGSLSISSLYNICVSGLCWAGWLDEAMKFLEDMLEKGITPTVVAFNSII 366

Query: 306 DGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVR 365
             Y   G  + A + +  M   G   + ++ + LI G  K+  ++EA  L  ++I  G+ 
Sbjct: 367 AAYSRAGLEEKAYKAYRMMVKFGLFPSSLTCSSLIMGLSKLWRLQEARDLLYEMIVEGLP 426

Query: 366 QTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKL 425
                +  LL G F+ G    A  L++EM+   + PD   ++  I+GL     V EA  +
Sbjct: 427 INKAAFTLLLDGYFRMGDVAGAYSLWNEMEGRGIHPDAVAFSAFINGLSIVGLVDEAYDV 486

Query: 426 FHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCR 485
           F  +    F     ++N LI G C +GRL  A  L  ++ +KGL+P + T +I+I+GLC+
Sbjct: 487 FLQMSKKGFMPNNFVYNSLIRGFCNSGRLQEALMLEREMARKGLLPDIFTTNIIINGLCK 546

Query: 486 KGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDD 545
           +G+++ A+D    M   G  P++VT+NTL+ G+ +   T    E+++KM     +  PD 
Sbjct: 547 EGRMKSASDVFRNMHHTGLIPDIVTYNTLIDGYCKAFDTVSTDEVVNKMYATGWD--PDI 604

Query: 546 TTFSI 550
           TT++I
Sbjct: 605 TTYNI 609



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 149/541 (27%), Positives = 250/541 (46%), Gaps = 47/541 (8%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAV-AKNRHYDAVISFYRKLVSIGLL 107
           C+ G + + E+      M   +  P + ++N+L  A   + + +DA + + R ++  G  
Sbjct: 160 CRKGHVKVGES--LLCVMQKFKCQPDVYAYNILINAYCTRGQTFDA-LGWMRFMIDNGCT 216

Query: 108 PDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGN 167
           P  +T   +IN F       C +  + EA  LF  M   G  P+V+ Y TL+NG+ +  +
Sbjct: 217 PSLVTFGTVINAF-------CNQGNMMEARNLFDGMKEAGHIPNVVCYNTLMNGYVKARD 269

Query: 168 LSVALRLHKKM---------------VSGDYENGLISKTN--------------IFSYSI 198
           +  A  L+++M               V+G Y  G     +                 Y+I
Sbjct: 270 IGQANMLYEEMKSKAVAPDCTTFNILVAGHYRYGREEDRDRLLRDLSQSGSLSISSLYNI 329

Query: 199 IIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLG 258
            +  LC  G +D+A +   +M  +GI P VV   ++I  +  AG  E+    +  M+  G
Sbjct: 330 CVSGLCWAGWLDEAMKFLEDMLEKGITPTVVAFNSIIAAYSRAGLEEKAYKAYRMMVKFG 389

Query: 259 PRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAR 318
             P+ LT + +I  L K  ++ EA  LL  MI  GL  ++  +  L+DGY  +G +  A 
Sbjct: 390 LFPSSLTCSSLIMGLSKLWRLQEARDLLYEMIVEGLPINKAAFTLLLDGYFRMGDVAGAY 449

Query: 319 EIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGL 378
            ++  M  +G     V+++  ING   +  V+EA  ++ Q+   G       YN+L+ G 
Sbjct: 450 SLWNEMEGRGIHPDAVAFSAFINGLSIVGLVDEAYDVFLQMSKKGFMPNNFVYNSLIRGF 509

Query: 379 FQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGI 438
             +G+   A  L  EM    + PD+ T NI+I+GLCK   ++ A  +F  +        I
Sbjct: 510 CNSGRLQEALMLEREMARKGLLPDIFTTNIIINGLCKEGRMKSASDVFRNMHHTGLIPDI 569

Query: 439 EIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLY 498
             +N LIDG CKA    +  E+ +K+   G  P + TY+I +HGLC   K+ +A   L  
Sbjct: 570 VTYNTLIDGYCKAFDTVSTDEVVNKMYATGWDPDITTYNIRLHGLCTGRKMSRAVMMLEE 629

Query: 499 MEKNGCAPNVVTFNTLMHGFLQN--NKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLA 556
           +   G  P+ VT+NT+M+G   +   +   V   L KMA      VP+  T ++++    
Sbjct: 630 LISAGVVPDTVTYNTVMNGVCTDVLERAMIVTAKLLKMA-----FVPNVVTANLLLSHFC 684

Query: 557 K 557
           K
Sbjct: 685 K 685



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 137/498 (27%), Positives = 230/498 (46%), Gaps = 20/498 (4%)

Query: 39  TQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFY 98
           T +N F    C  G  N+ EAR  F  M      P +  +N L     K R        Y
Sbjct: 224 TVINAF----CNQG--NMMEARNLFDGMKEAGHIPNVVCYNTLMNGYVKARDIGQANMLY 277

Query: 99  RKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTL 158
            ++ S  + PD  T NIL+   G+   G     R ++   L +++   G       Y   
Sbjct: 278 EEMKSKAVAPDCTTFNILVA--GHYRYG-----REEDRDRLLRDLSQSGSLSISSLYNIC 330

Query: 159 INGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLE 218
           ++G C  G L  A++  + M+    E G+     + +++ II +  + GL +KA + +  
Sbjct: 331 VSGLCWAGWLDEAMKFLEDML----EKGITP--TVVAFNSIIAAYSRAGLEEKAYKAYRM 384

Query: 219 MKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGK 278
           M   G+ P+ + C++LI G       +E   L  EM+  G   N   F +++D   + G 
Sbjct: 385 MVKFGLFPSSLTCSSLIMGLSKLWRLQEARDLLYEMIVEGLPINKAAFTLLLDGYFRMGD 444

Query: 279 INEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNI 338
           +  A  L   M  RG++PD   +++ ++G  +VG +D A ++FL M  KG       YN 
Sbjct: 445 VAGAYSLWNEMEGRGIHPDAVAFSAFINGLSIVGLVDEAYDVFLQMSKKGFMPNNFVYNS 504

Query: 339 LINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYN 398
           LI G+C    ++EA+ L R++   G+   + T N +++GL + G+   A  +F  M    
Sbjct: 505 LIRGFCNSGRLQEALMLEREMARKGLLPDIFTTNIIINGLCKEGRMKSASDVFRNMHHTG 564

Query: 399 VEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAW 458
           + PD+ TYN LIDG CK        ++ + +    ++  I  +N  + GLC   ++  A 
Sbjct: 565 LIPDIVTYNTLIDGYCKAFDTVSTDEVVNKMYATGWDPDITTYNIRLHGLCTGRKMSRAV 624

Query: 459 ELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGF 518
            +  +L   G+VP  VTY+ +++G+C    LE+A      + K    PNVVT N L+  F
Sbjct: 625 MMLEELISAGVVPDTVTYNTVMNGVCTD-VLERAMIVTAKLLKMAFVPNVVTANLLLSHF 683

Query: 519 LQNNKTSKVVELLHKMAE 536
            +     K +    K+ E
Sbjct: 684 CKQGMPEKTIMWGQKLNE 701



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 112/386 (29%), Positives = 189/386 (48%), Gaps = 20/386 (5%)

Query: 56  LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNI 115
           L+EA  F   M     +P + +FN +  A ++    +     YR +V  GL P  LT + 
Sbjct: 340 LDEAMKFLEDMLEKGITPTVVAFNSIIAAYSRAGLEEKAYKAYRMMVKFGLFPSSLTCSS 399

Query: 116 LINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLH 175
           LI        GL    R++EA  L   MI  G+  +   +  L++G+ R G+++ A  L 
Sbjct: 400 LI-------MGLSKLWRLQEARDLLYEMIVEGLPINKAAFTLLLDGYFRMGDVAGAYSLW 452

Query: 176 KKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLI 235
            +M       G     +  ++S  I+ L   GLVD+A ++FL+M  +G  P   V  +LI
Sbjct: 453 NEM------EGRGIHPDAVAFSAFINGLSIVGLVDEAYDVFLQMSKKGFMPNNFVYNSLI 506

Query: 236 HGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLN 295
            GFC +G  +E   L  EM   G  P++ T N++I+ LCK G++  A+ +   M   GL 
Sbjct: 507 RGFCNSGRLQEALMLEREMARKGLLPDIFTTNIIINGLCKEGRMKSASDVFRNMHHTGLI 566

Query: 296 PDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSL 355
           PD  TYN+L+DGYC      +  E+   M++ G    + +YNI ++G C    +  A+ +
Sbjct: 567 PDIVTYNTLIDGYCKAFDTVSTDEVVNKMYATGWDPDITTYNIRLHGLCTGRKMSRAVMM 626

Query: 356 YRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVE--PDLSTYNILIDGL 413
             ++IS GV    +TYNT+++G+         + +    KL  +   P++ T N+L+   
Sbjct: 627 LEELISAGVVPDTVTYNTVMNGVCTDV---LERAMIVTAKLLKMAFVPNVVTANLLLSHF 683

Query: 414 CKNNCVQEAVKLFHMLEMNKFEFGIE 439
           CK    ++ +      ++N+  FG +
Sbjct: 684 CKQGMPEKTIMWGQ--KLNEISFGFD 707



 Score =  145 bits (366), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 111/426 (26%), Positives = 191/426 (44%), Gaps = 12/426 (2%)

Query: 151 DVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVD 210
           D     TL+ GF +      AL +  +M     E GL   ++  + +I+   L + G   
Sbjct: 78  DFSVLDTLMRGFLKVEMGCEALEIVGRM----REVGLRPSSS--AITILFKLLLRIGDHG 131

Query: 211 KAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMI 270
              +L   M  +G  P       +I GFC  G+ +    L   M     +P++  +N++I
Sbjct: 132 SVWKLLRGMIHQGPRPCNRNFNAVILGFCRKGHVKVGESLLCVMQKFKCQPDVYAYNILI 191

Query: 271 DCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCK 330
           +  C  G+  +A G +  MI  G  P   T+ ++++ +C  G +  AR +F  M   G  
Sbjct: 192 NAYCTRGQTFDALGWMRFMIDNGCTPSLVTFGTVINAFCNQGNMMEARNLFDGMKEAGHI 251

Query: 331 HTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKL 390
             VV YN L+NGY K  ++ +A  LY ++ S  V     T+N L++G ++ G+     +L
Sbjct: 252 PNVVCYNTLMNGYVKARDIGQANMLYEEMKSKAVAPDCTTFNILVAGHYRYGREEDRDRL 311

Query: 391 FDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCK 450
             ++         S YNI + GLC    + EA+K    +        +  FN +I    +
Sbjct: 312 LRDLSQSGSLSISSLYNICVSGLCWAGWLDEAMKFLEDMLEKGITPTVVAFNSIIAAYSR 371

Query: 451 AGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVT 510
           AG  + A++ +  + + GL P+ +T S +I GL +  +L++A D L  M   G   N   
Sbjct: 372 AGLEEKAYKAYRMMVKFGLFPSSLTCSSLIMGLSKLWRLQEARDLLYEMIVEGLPINKAA 431

Query: 511 FNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLA----KDEKYHECSA 566
           F  L+ G+ +    +    L ++M    R + PD   FS  ++ L+     DE Y     
Sbjct: 432 FTLLLDGYFRMGDVAGAYSLWNEM--EGRGIHPDAVAFSAFINGLSIVGLVDEAYDVFLQ 489

Query: 567 VSKSSY 572
           +SK  +
Sbjct: 490 MSKKGF 495


>gi|413936859|gb|AFW71410.1| hypothetical protein ZEAMMB73_528560 [Zea mays]
          Length = 671

 Score =  208 bits (529), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 138/484 (28%), Positives = 233/484 (48%), Gaps = 31/484 (6%)

Query: 80  LLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWL 139
           L+ G     R  DA+    R + S+ + PD  T N ++       +GLC   + ++A  L
Sbjct: 190 LIDGYCRSGRLADAL----RLIASMPVAPDTYTYNTVL-------KGLCCAKQWEQAEEL 238

Query: 140 FKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSII 199
            + MI     P+ +T+ T I  FC+ G L  A+ L ++M             ++  YS +
Sbjct: 239 MREMIRNSCHPNEVTFATQIRAFCQNGLLDRAVELLEQMPKYG------CTPDVIIYSTL 292

Query: 200 IDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGP 259
           ++   + G VD+A +L   M  R   P  V     + G C AG WEEV  L  EM+    
Sbjct: 293 VNGFSEHGRVDEALKLLNTMLCR---PNTVCYNAALKGLCIAGRWEEVGELIAEMVRKDC 349

Query: 260 RPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTARE 319
            PN  TF+ +I+ LC+   +  A  +LE M + G  PD  +YN+++  +    R D A +
Sbjct: 350 PPNDATFSTLINSLCQNRLVEYAVEVLEQMQKYGYMPDVVSYNTIISCFSDQARADDALK 409

Query: 320 IFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLF 379
           +  SM    CK   +S+N ++   CK     +A+ L  +++    R   +T+N L+  L 
Sbjct: 410 LLKSML---CKPDTISFNAVLKCLCKAKRWYDAVELVAKMLKKDCRINEMTFNILIDSLC 466

Query: 380 QAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIE 439
           Q GQ   A ++F+ M  Y   PD+ TY+ LI+G  +    + A  LF  +      F   
Sbjct: 467 QNGQVKDAIEVFELMPKYRCMPDIVTYSSLINGFSEQGLDEMAFDLFRSMPCRADIFS-- 524

Query: 440 IFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYM 499
            +N  + GLC A R D+A EL   +  +  +P  VT++I+I  LC+KG + +A D    M
Sbjct: 525 -YNATLKGLCMAARWDDAGELIADMVTEDCLPNEVTFNILISSLCQKGLVNRAIDVYEQM 583

Query: 500 EKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDE 559
            K G  P++ T+N L++G+ +  +    ++ L  M        PD  +++ ++  L + E
Sbjct: 584 PKYGITPDIFTYNALINGYSEQGRLDDALKFLSTMP-----CEPDTISYNSILKGLCRAE 638

Query: 560 KYHE 563
           ++ +
Sbjct: 639 RWKD 642



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 139/500 (27%), Positives = 235/500 (47%), Gaps = 51/500 (10%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           C+SG   L +A      +  M  +P   ++N +   +   + ++      R+++     P
Sbjct: 195 CRSG--RLADA---LRLIASMPVAPDTYTYNTVLKGLCCAKQWEQAEELMREMIRNSCHP 249

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           + +T       F  + R  C    +  A  L + M  +G  PDVI Y TL+NGF   G +
Sbjct: 250 NEVT-------FATQIRAFCQNGLLDRAVELLEQMPKYGCTPDVIIYSTLVNGFSEHGRV 302

Query: 169 SVALRLHKKM-----------------VSGDYEN--GLISK-------TNIFSYSIIIDS 202
             AL+L   M                 ++G +E    LI++        N  ++S +I+S
Sbjct: 303 DEALKLLNTMLCRPNTVCYNAALKGLCIAGRWEEVGELIAEMVRKDCPPNDATFSTLINS 362

Query: 203 LCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPN 262
           LC+  LV+ A E+  +M+  G  P VV   T+I  F      ++   L   ML    +P+
Sbjct: 363 LCQNRLVEYAVEVLEQMQKYGYMPDVVSYNTIISCFSDQARADDALKLLKSML---CKPD 419

Query: 263 LLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFL 322
            ++FN ++ CLCK  +  +A  L+  M+++    +  T+N L+D  C  G++  A E+F 
Sbjct: 420 TISFNAVLKCLCKAKRWYDAVELVAKMLKKDCRINEMTFNILIDSLCQNGQVKDAIEVFE 479

Query: 323 SMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAG 382
            M    C   +V+Y+ LING+ +    E A  L+R   S   R  + +YN  L GL  A 
Sbjct: 480 LMPKYRCMPDIVTYSSLINGFSEQGLDEMAFDLFR---SMPCRADIFSYNATLKGLCMAA 536

Query: 383 QAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIF- 441
           +   A +L  +M   +  P+  T+NILI  LC+   V  A+ ++   +M K+    +IF 
Sbjct: 537 RWDDAGELIADMVTEDCLPNEVTFNILISSLCQKGLVNRAIDVYE--QMPKYGITPDIFT 594

Query: 442 -NCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYME 500
            N LI+G  + GRLD+A +    +P +   P  ++Y+ ++ GLCR  + + A   +  M 
Sbjct: 595 YNALINGYSEQGRLDDALKFLSTMPCE---PDTISYNSILKGLCRAERWKDAEKLVTEML 651

Query: 501 KNGCAPNVVTFNTLMHGFLQ 520
           +  C PN VTF      F++
Sbjct: 652 RKNCTPNEVTFKYANQLFIK 671



 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 121/427 (28%), Positives = 207/427 (48%), Gaps = 24/427 (5%)

Query: 108 PDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGN 167
           P  ++ NILI       + LC   R+ +A  + + + A G   D +++ TL+ G+CR G+
Sbjct: 114 PAVISCNILI-------KKLCARRRLADAERVLEALKASGA-ADAVSHNTLVAGYCRDGS 165

Query: 168 LSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPA 227
           L  A    +++V     +G     N+ +Y+ +ID  C+ G +  A  L   M    + P 
Sbjct: 166 LGDA----ERVVEAARASG---TANVVTYTALIDGYCRSGRLADALRLIASMP---VAPD 215

Query: 228 VVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLE 287
                T++ G CCA  WE+   L  EM+     PN +TF   I   C+ G ++ A  LLE
Sbjct: 216 TYTYNTVLKGLCCAKQWEQAEELMREMIRNSCHPNEVTFATQIRAFCQNGLLDRAVELLE 275

Query: 288 LMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKIL 347
            M + G  PD   Y++L++G+   GR+D A ++  +M    C+   V YN  + G C   
Sbjct: 276 QMPKYGCTPDVIIYSTLVNGFSEHGRVDEALKLLNTML---CRPNTVCYNAALKGLCIAG 332

Query: 348 NVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYN 407
             EE   L  +++         T++TL++ L Q     YA ++ ++M+ Y   PD+ +YN
Sbjct: 333 RWEEVGELIAEMVRKDCPPNDATFSTLINSLCQNRLVEYAVEVLEQMQKYGYMPDVVSYN 392

Query: 408 ILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQK 467
            +I          +A+KL   +           FN ++  LCKA R  +A EL  K+ +K
Sbjct: 393 TIISCFSDQARADDALKLLKSMLCKPDTIS---FNAVLKCLCKAKRWYDAVELVAKMLKK 449

Query: 468 GLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKV 527
                 +T++I+I  LC+ G+++ A +    M K  C P++VT+++L++GF +       
Sbjct: 450 DCRINEMTFNILIDSLCQNGQVKDAIEVFELMPKYRCMPDIVTYSSLINGFSEQGLDEMA 509

Query: 528 VELLHKM 534
            +L   M
Sbjct: 510 FDLFRSM 516


>gi|242051246|ref|XP_002463367.1| hypothetical protein SORBIDRAFT_02g042500 [Sorghum bicolor]
 gi|241926744|gb|EER99888.1| hypothetical protein SORBIDRAFT_02g042500 [Sorghum bicolor]
          Length = 543

 Score =  208 bits (529), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 124/400 (31%), Positives = 209/400 (52%), Gaps = 10/400 (2%)

Query: 126 GLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYEN 185
           G C   R+ +A  L   M   GVR + + Y +L++ + R  + +    L + M     EN
Sbjct: 141 GFCKSGRVDDARALLDEMPRHGVRLNALCYNSLLDCYVRRKDDARVQELLEIM-----EN 195

Query: 186 GLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWE 245
           G I  T + +Y+I++DSL   G + K + +  EMK + +   V + T +I+ +C AGN  
Sbjct: 196 GGIEAT-VGTYTILVDSLSTAGDISKVEAVVDEMKAKNVAGDVYLYTAVINAYCRAGNVR 254

Query: 246 EVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLM 305
             + +F E +  G  PN  T+ V+I+  CK G++  A  LL  M  RG+  ++  +N+++
Sbjct: 255 RASEVFDECVGNGIEPNERTYGVLINGFCKIGQMEAAEMLLADMQGRGVGHNQIIFNTMI 314

Query: 306 DGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVR 365
           DGYC  G +D A ++  +M   G +  V +YN L  G C++  + EA +L   +I  GV 
Sbjct: 315 DGYCRQGMVDNALKVKAAMEKMGIELDVYTYNTLACGLCRVNRMAEAKTLLHIMIEKGVP 374

Query: 366 QTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKL 425
              +TY TL+S   + G    A++LF EM      P + TYN+++DG  K   ++EA + 
Sbjct: 375 PNYVTYTTLISIHCKEGDMVEARRLFREMAGKGAMPSVVTYNVMMDGYIKKGSIREAERF 434

Query: 426 FHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCR 485
              +E       +  +  L+ G C  G++D A +LF ++  +G  P VV Y+ +I GL +
Sbjct: 435 RKEMEKKGLVPDVYTYASLVHGHCVNGKVDVALKLFEEMKHRGTEPNVVAYTALISGLAK 494

Query: 486 KGKLEKANDFLLY--MEKNGCAPNVVTFNTLMHGFLQNNK 523
           +G+ E+A  F LY  M K G  P+   ++ L+     +N+
Sbjct: 495 EGRSEEA--FQLYDDMLKAGLTPDDSLYSALVGSLHTDNR 532



 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 108/371 (29%), Positives = 183/371 (49%), Gaps = 2/371 (0%)

Query: 194 FSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIE 253
            + S+++D  CK G VD A+ L  EM   G+    +   +L+  +    +   V  L   
Sbjct: 133 LAASVVVDGFCKSGRVDDARALLDEMPRHGVRLNALCYNSLLDCYVRRKDDARVQELLEI 192

Query: 254 MLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGR 313
           M + G    + T+ +++D L   G I++   +++ M  + +  D + Y ++++ YC  G 
Sbjct: 193 MENGGIEATVGTYTILVDSLSTAGDISKVEAVVDEMKAKNVAGDVYLYTAVINAYCRAGN 252

Query: 314 IDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNT 373
           +  A E+F      G +    +Y +LING+CKI  +E A  L   +   GV    I +NT
Sbjct: 253 VRRASEVFDECVGNGIEPNERTYGVLINGFCKIGQMEAAEMLLADMQGRGVGHNQIIFNT 312

Query: 374 LLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNK 433
           ++ G  + G    A K+   M+   +E D+ TYN L  GLC+ N + EA  L H++    
Sbjct: 313 MIDGYCRQGMVDNALKVKAAMEKMGIELDVYTYNTLACGLCRVNRMAEAKTLLHIMIEKG 372

Query: 434 FEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKAN 493
                  +  LI   CK G +  A  LF ++  KG +P+VVTY++M+ G  +KG + +A 
Sbjct: 373 VPPNYVTYTTLISIHCKEGDMVEARRLFREMAGKGAMPSVVTYNVMMDGYIKKGSIREAE 432

Query: 494 DFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
            F   MEK G  P+V T+ +L+HG   N K    ++L  +M    R   P+   ++ ++ 
Sbjct: 433 RFRKEMEKKGLVPDVYTYASLVHGHCVNGKVDVALKLFEEM--KHRGTEPNVVAYTALIS 490

Query: 554 LLAKDEKYHEC 564
            LAK+ +  E 
Sbjct: 491 GLAKEGRSEEA 501



 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 109/403 (27%), Positives = 195/403 (48%), Gaps = 8/403 (1%)

Query: 158 LINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFL 217
           +++GFC++G +  A  L  +M      +G+  + N   Y+ ++D   +     + +EL  
Sbjct: 138 VVDGFCKSGRVDDARALLDEMP----RHGV--RLNALCYNSLLDCYVRRKDDARVQELLE 191

Query: 218 EMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGG 277
            M+  GI   V   T L+     AG+  +V  +  EM       ++  +  +I+  C+ G
Sbjct: 192 IMENGGIEATVGTYTILVDSLSTAGDISKVEAVVDEMKAKNVAGDVYLYTAVINAYCRAG 251

Query: 278 KINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYN 337
            +  A+ + +  +  G+ P+  TY  L++G+C +G+++ A  +   M  +G  H  + +N
Sbjct: 252 NVRRASEVFDECVGNGIEPNERTYGVLINGFCKIGQMEAAEMLLADMQGRGVGHNQIIFN 311

Query: 338 ILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLY 397
            +I+GYC+   V+ A+ +   +   G+   V TYNTL  GL +  +   A+ L   M   
Sbjct: 312 TMIDGYCRQGMVDNALKVKAAMEKMGIELDVYTYNTLACGLCRVNRMAEAKTLLHIMIEK 371

Query: 398 NVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNA 457
            V P+  TY  LI   CK   + EA +LF  +        +  +N ++DG  K G +  A
Sbjct: 372 GVPPNYVTYTTLISIHCKEGDMVEARRLFREMAGKGAMPSVVTYNVMMDGYIKKGSIREA 431

Query: 458 WELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHG 517
                ++ +KGLVP V TY+ ++HG C  GK++ A      M+  G  PNVV +  L+ G
Sbjct: 432 ERFRKEMEKKGLVPDVYTYASLVHGHCVNGKVDVALKLFEEMKHRGTEPNVVAYTALISG 491

Query: 518 FLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEK 560
             +  ++ +  +L   M +    L PDD+ +S +V  L  D +
Sbjct: 492 LAKEGRSEEAFQLYDDMLKA--GLTPDDSLYSALVGSLHTDNR 532



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 91/277 (32%), Positives = 143/277 (51%), Gaps = 13/277 (4%)

Query: 102 VSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLING 161
           V  G+ P+  T  +LIN       G C   +++ A  L  +M   GV  + I + T+I+G
Sbjct: 264 VGNGIEPNERTYGVLIN-------GFCKIGQMEAAEMLLADMQGRGVGHNQIIFNTMIDG 316

Query: 162 FCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKG 221
           +CR G +  AL++   M     E       ++++Y+ +   LC+   + +AK L   M  
Sbjct: 317 YCRQGMVDNALKVKAAMEKMGIE------LDVYTYNTLACGLCRVNRMAEAKTLLHIMIE 370

Query: 222 RGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINE 281
           +G+ P  V  TTLI   C  G+  E   LF EM   G  P+++T+NVM+D   K G I E
Sbjct: 371 KGVPPNYVTYTTLISIHCKEGDMVEARRLFREMAGKGAMPSVVTYNVMMDGYIKKGSIRE 430

Query: 282 ANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILIN 341
           A    + M ++GL PD +TY SL+ G+C+ G++D A ++F  M  +G +  VV+Y  LI+
Sbjct: 431 AERFRKEMEKKGLVPDVYTYASLVHGHCVNGKVDVALKLFEEMKHRGTEPNVVAYTALIS 490

Query: 342 GYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGL 378
           G  K    EEA  LY  ++  G+      Y+ L+  L
Sbjct: 491 GLAKEGRSEEAFQLYDDMLKAGLTPDDSLYSALVGSL 527



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 42/156 (26%), Positives = 70/156 (44%), Gaps = 15/156 (9%)

Query: 48  NCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLL 107
           +CK G  ++ EAR  F  M      P + ++N++     K         F +++   GL+
Sbjct: 387 HCKEG--DMVEARRLFREMAGKGAMPSVVTYNVMMDGYIKKGSIREAERFRKEMEKKGLV 444

Query: 108 PDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGN 167
           PD  T   L++       G CV  ++  A  LF+ M   G  P+V+ Y  LI+G  + G 
Sbjct: 445 PDVYTYASLVH-------GHCVNGKVDVALKLFEEMKHRGTEPNVVAYTALISGLAKEGR 497

Query: 168 LSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSL 203
              A +L+  M+      GL    ++  YS ++ SL
Sbjct: 498 SEEAFQLYDDMLKA----GLTPDDSL--YSALVGSL 527


>gi|449446442|ref|XP_004140980.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Cucumis sativus]
          Length = 1000

 Score =  208 bits (529), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 137/504 (27%), Positives = 234/504 (46%), Gaps = 41/504 (8%)

Query: 39  TQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISF- 97
           T  N  +H  CKS   + + A      M   +  P    +N+L G++         ++F 
Sbjct: 379 TIFNSLVHAYCKSD--DFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGELPGPVTFE 436

Query: 98  -----YRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDV 152
                Y +++S G + + + +     C       LC   + ++A  +   M+  G  PD 
Sbjct: 437 LAEKAYNEMLSAGTVLNKVNVVSFARC-------LCGFGKFEKAYKVIHEMMGNGFVPDT 489

Query: 153 ITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKA 212
            TY  +I   C    +  A  L K+M       G     ++++Y+I+ID   K G++ +A
Sbjct: 490 STYSEVIGFLCNASRVENAFFLFKEM------KGTGVVPDVYTYTILIDCFSKAGIIKQA 543

Query: 213 KELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDC 272
                EM   G  P VV  TTLIH +  A      N LF  M+  G  PN++T+  +ID 
Sbjct: 544 HNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDG 603

Query: 273 LCKGGKINEANGLLELMIQRG------------------LNPDRFTYNSLMDGYCLVGRI 314
            CK G I +A  +   M  RG                    P+  TY +L+DG C   ++
Sbjct: 604 YCKSGNIEKACQIYARM--RGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKV 661

Query: 315 DTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTL 374
             AR++  +M   GC+   + Y+ LI+G+CK   ++EA  ++ +++ +G    V TY++L
Sbjct: 662 KDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVEHGYNPNVYTYSSL 721

Query: 375 LSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKF 434
           +  LF+  +     K+  +M   +  P++  Y  +IDGL K     EA KL  M+E    
Sbjct: 722 IDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGC 781

Query: 435 EFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKAND 494
           +  +  +  +IDG  KAG++D   ELF ++  KG  P  VTY+++I+  C  G L++A  
Sbjct: 782 KPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYA 841

Query: 495 FLLYMEKNGCAPNVVTFNTLMHGF 518
            L  M++     +V ++  ++ G+
Sbjct: 842 LLEEMKQTYWPKHVSSYCKVIEGY 865



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 134/509 (26%), Positives = 235/509 (46%), Gaps = 82/509 (16%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGN----KERGLC 128
           P  S+++ + G +      +     ++++   G++PD  T  ILI+CF      K+    
Sbjct: 487 PDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNW 546

Query: 129 VENRIKE------------------------ATWLFKNMIAFGVRPDVITYGTLINGFCR 164
           ++  +++                        A  LF+ MIA G  P+VITY  LI+G+C+
Sbjct: 547 LDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCK 606

Query: 165 TGNLSVALRLHKKMVSGDYE-----------NGLISKTNIFSYSIIIDSLCKEGLVDKAK 213
           +GN+  A +++ +M  GD +           N +  K N+ +Y  ++D LCK   V  A+
Sbjct: 607 SGNIEKACQIYARM-RGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDAR 665

Query: 214 ELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCL 273
           +L   M   G  P  +V   LI GFC A   +E   +F +M++ G  PN+ T++ +ID L
Sbjct: 666 DLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVEHGYNPNVYTYSSLIDRL 725

Query: 274 CKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTV 333
            K  +++    +L  M++    P+   Y  ++DG   V + D A ++ L M  KGCK  V
Sbjct: 726 FKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNV 785

Query: 334 VSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDE 393
           V+Y  +I+G+ K   V++ + L+R++ S G     +TY  L++     G    A  L +E
Sbjct: 786 VTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEE 845

Query: 394 MKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGR 453
           MK       +S+Y  +I+G  +   +  ++ L   +E N     I ++  LID   KAGR
Sbjct: 846 MKQTYWPKHVSSYCKVIEGYKREFIL--SLGLLEEVEKNGSAPIILLYKVLIDNFVKAGR 903

Query: 454 LD-------------------------------------NAWELFHKLPQKGLVPTVVTY 476
           L+                                     +A+ELF+ + + G++P + T+
Sbjct: 904 LEVALELHKEVISASMSMAAKKNLYTSLIYSFSYASKIGHAFELFYDMIRDGVIPDLGTF 963

Query: 477 SIMIHGLCRKGKLEKA---NDFLLYMEKN 502
             ++ GL R  + E+A   +D L  M+ N
Sbjct: 964 VHLLMGLIRVRRWEEALQLSDSLCQMDIN 992



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 145/616 (23%), Positives = 252/616 (40%), Gaps = 112/616 (18%)

Query: 41  LNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRK 100
           LN  + + C++G+ N+  A    G +      P   ++N L     +    D     +R+
Sbjct: 209 LNVLIRKCCRNGLWNV--ALEELGRLKDFGYKPTRMTYNALVQVFLRADKLDTAQLVHRE 266

Query: 101 LVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLIN 160
           +  +GL  D  TL           + LC   + +EA  L +        P+ I Y  +I+
Sbjct: 267 MSELGLSMDEFTLGFF-------AQALCKVGKWREALSLIEKE---DFVPNTILYNKMIS 316

Query: 161 GFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMK 220
           G C       A+    +M S           N+ +Y I++     +  + + K +   M 
Sbjct: 317 GLCEASFFEEAMDFLNRMRSTS------CIPNVQTYRILLCGCLNKKQLGRCKRILSMMI 370

Query: 221 GRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKG---- 276
             G  P+  +  +L+H +C + ++     L  +M     +P  + +N++I  +C G    
Sbjct: 371 AEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGELP 430

Query: 277 -------------------------------------GKINEANGLLELMIQRGLNPDRF 299
                                                GK  +A  ++  M+  G  PD  
Sbjct: 431 GPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPDTS 490

Query: 300 TYNSLMDGYCLVGRIDTAREIFLSMHS--------------------------------- 326
           TY+ ++   C   R++ A  +F  M                                   
Sbjct: 491 TYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEM 550

Query: 327 --KGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQA 384
              GC+ TVV+Y  LI+ Y K   V  A  L+  +I+ G    VITY  L+ G  ++G  
Sbjct: 551 VRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNI 610

Query: 385 GYAQKLFDEMK---------LY-----NV--EPDLSTYNILIDGLCKNNCVQEAVKLFHM 428
             A +++  M+         +Y     NV  +P++ TY  L+DGLCK + V++A  L   
Sbjct: 611 EKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLET 670

Query: 429 LEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGK 488
           + ++  E    +++ LIDG CKA +LD A E+FHK+ + G  P V TYS +I  L +  +
Sbjct: 671 MFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVEHGYNPNVYTYSSLIDRLFKDKR 730

Query: 489 LEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTF 548
           L+     L  M +N CAPN+V +  ++ G  +  KT +  +L+  M   E+   P+  T+
Sbjct: 731 LDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMME--EKGCKPNVVTY 788

Query: 549 SIVVDLLAKDEKYHEC 564
           + ++D   K  K  +C
Sbjct: 789 TAMIDGFGKAGKVDKC 804



 Score =  115 bits (289), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 98/426 (23%), Positives = 164/426 (38%), Gaps = 82/426 (19%)

Query: 205 KEGLVDKAKELFL-EMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNL 263
           + G  D+  E FL E++G        +   LI   C  G W         + D G +P  
Sbjct: 182 ERGSYDRVPEEFLREIRGDDKEVLGKLLNVLIRKCCRNGLWNVALEELGRLKDFGYKPTR 241

Query: 264 LTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLS 323
           +T+N ++    +  K++ A  +   M + GL+ D FT        C VG+    RE    
Sbjct: 242 MTYNALVQVFLRADKLDTAQLVHREMSELGLSMDEFTLGFFAQALCKVGKW---REALSL 298

Query: 324 MHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQ 383
           +  +      + YN +I+G C+    EEAM    ++ S      V TY  LL G     Q
Sbjct: 299 IEKEDFVPNTILYNKMISGLCEASFFEEAMDFLNRMRSTSCIPNVQTYRILLCGCLNKKQ 358

Query: 384 AGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNC 443
            G  +++   M      P  + +N L+   CK++    A KL   +E  + + G  ++N 
Sbjct: 359 LGRCKRILSMMIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNI 418

Query: 444 LIDGLCKAGRL-----------------------------------------DNAWELFH 462
           LI  +C  G L                                         + A+++ H
Sbjct: 419 LIGSICSGGELPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIH 478

Query: 463 KLPQKGLVPTVVTYSIMIHGLC-----------------------------------RKG 487
           ++   G VP   TYS +I  LC                                   + G
Sbjct: 479 EMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAG 538

Query: 488 KLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTT 547
            +++A+++L  M ++GC P VVT+ TL+H +L+  K S   EL   M    +   P+  T
Sbjct: 539 IIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMI--AKGCFPNVIT 596

Query: 548 FSIVVD 553
           ++ ++D
Sbjct: 597 YTALID 602


>gi|326513552|dbj|BAJ87795.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 538

 Score =  208 bits (529), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 121/398 (30%), Positives = 203/398 (51%), Gaps = 7/398 (1%)

Query: 126 GLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYEN 185
           G C   R+ +A  L   M   GV+ +   Y  L++ + R  N +    + K+M SG  E 
Sbjct: 142 GFCKAGRMDDARRLLDEMPRHGVKLNACCYNPLLDTYTRQKNDARVAEVLKEMESGGVE- 200

Query: 186 GLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWE 245
                  + +Y+I++D L   G + K + +F E+K + +   V   + +I+ +C AGN  
Sbjct: 201 -----PTVGTYTILVDGLSTAGDISKVESVFDEIKRKNVAGDVYFYSAVINAYCRAGNVR 255

Query: 246 EVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLM 305
             + +F E +  G  PN  T+  +I+  CK G+I  A  LL  M  RG+  ++  +N+++
Sbjct: 256 RASEVFDECVGNGIEPNERTYGALINGFCKIGQIEAAEMLLTDMQLRGVGHNQIIFNTMI 315

Query: 306 DGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVR 365
           DGYC  G +D A EI   M   G +  V +YN L  G C++  +E+A  L   +  NGV 
Sbjct: 316 DGYCRHGMVDKALEIKAVMERMGIQLDVYTYNTLACGLCRVNRMEDAKKLLHIMTENGVE 375

Query: 366 QTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKL 425
              ++Y TL+S   + G    A++LF +M+     P + TYN++IDG  K+  ++EA + 
Sbjct: 376 SNYVSYTTLISIHSKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKSGSIREAERF 435

Query: 426 FHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCR 485
              +E       +  +  L+ G C  G++D A  LF ++ Q+G  P VV Y+ +I GL +
Sbjct: 436 KKEMEKKGLVPDVYTYAALVHGHCVNGKVDVALRLFEEMKQRGAKPNVVAYTALISGLAK 495

Query: 486 KGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNK 523
           +G+ E+A  F   M   G  P+   ++ L+ G L  +K
Sbjct: 496 EGRSEEAFQFYDNMLAAGLTPDDTLYSMLV-GSLHTDK 532



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 115/411 (27%), Positives = 210/411 (51%), Gaps = 8/411 (1%)

Query: 153 ITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKA 212
           ++   +++GFC+ G +  A RL  +M      +G+  K N   Y+ ++D+  ++    + 
Sbjct: 134 LSASVVVDGFCKAGRMDDARRLLDEMP----RHGV--KLNACCYNPLLDTYTRQKNDARV 187

Query: 213 KELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDC 272
            E+  EM+  G+ P V   T L+ G   AG+  +V  +F E+       ++  ++ +I+ 
Sbjct: 188 AEVLKEMESGGVEPTVGTYTILVDGLSTAGDISKVESVFDEIKRKNVAGDVYFYSAVINA 247

Query: 273 LCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHT 332
            C+ G +  A+ + +  +  G+ P+  TY +L++G+C +G+I+ A  +   M  +G  H 
Sbjct: 248 YCRAGNVRRASEVFDECVGNGIEPNERTYGALINGFCKIGQIEAAEMLLTDMQLRGVGHN 307

Query: 333 VVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFD 392
            + +N +I+GYC+   V++A+ +   +   G++  V TYNTL  GL +  +   A+KL  
Sbjct: 308 QIIFNTMIDGYCRHGMVDKALEIKAVMERMGIQLDVYTYNTLACGLCRVNRMEDAKKLLH 367

Query: 393 EMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAG 452
            M    VE +  +Y  LI    K   + EA +LF  +E       +  +N +IDG  K+G
Sbjct: 368 IMTENGVESNYVSYTTLISIHSKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKSG 427

Query: 453 RLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFN 512
            +  A     ++ +KGLVP V TY+ ++HG C  GK++ A      M++ G  PNVV + 
Sbjct: 428 SIREAERFKKEMEKKGLVPDVYTYAALVHGHCVNGKVDVALRLFEEMKQRGAKPNVVAYT 487

Query: 513 TLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
            L+ G  +  ++ +  +    M      L PDDT +S++V  L  D++  E
Sbjct: 488 ALISGLAKEGRSEEAFQFYDNMLAA--GLTPDDTLYSMLVGSLHTDKRKDE 536



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 89/281 (31%), Positives = 142/281 (50%), Gaps = 13/281 (4%)

Query: 98  YRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGT 157
           + + V  G+ P+  T   LIN       G C   +I+ A  L  +M   GV  + I + T
Sbjct: 261 FDECVGNGIEPNERTYGALIN-------GFCKIGQIEAAEMLLTDMQLRGVGHNQIIFNT 313

Query: 158 LINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFL 217
           +I+G+CR G +  AL +   M        +  + ++++Y+ +   LC+   ++ AK+L  
Sbjct: 314 MIDGYCRHGMVDKALEIKAVM------ERMGIQLDVYTYNTLACGLCRVNRMEDAKKLLH 367

Query: 218 EMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGG 277
            M   G+    V  TTLI      G+  E   LF +M   G RP+++T+NVMID   K G
Sbjct: 368 IMTENGVESNYVSYTTLISIHSKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKSG 427

Query: 278 KINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYN 337
            I EA    + M ++GL PD +TY +L+ G+C+ G++D A  +F  M  +G K  VV+Y 
Sbjct: 428 SIREAERFKKEMEKKGLVPDVYTYAALVHGHCVNGKVDVALRLFEEMKQRGAKPNVVAYT 487

Query: 338 ILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGL 378
            LI+G  K    EEA   Y  +++ G+      Y+ L+  L
Sbjct: 488 ALISGLAKEGRSEEAFQFYDNMLAAGLTPDDTLYSMLVGSL 528



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 69/276 (25%), Positives = 131/276 (47%), Gaps = 4/276 (1%)

Query: 258 GPRPNLLTFNVMI-DCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDT 316
            PR  + +F+ M+       G  + A   L+L + R  + D  +  S +      G +  
Sbjct: 56  APRHAVASFHDMLFRAYADAGAPDRAAEALDLTVSRLGSLDPRSLTSSLLSLRRTGHLLP 115

Query: 317 AREIFLSMHSK--GCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTL 374
           A E+     +   GC  T +S +++++G+CK   +++A  L  ++  +GV+     YN L
Sbjct: 116 AAELLRKALASCPGCI-TPLSASVVVDGFCKAGRMDDARRLLDEMPRHGVKLNACCYNPL 174

Query: 375 LSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKF 434
           L    +        ++  EM+   VEP + TY IL+DGL     + +   +F  ++    
Sbjct: 175 LDTYTRQKNDARVAEVLKEMESGGVEPTVGTYTILVDGLSTAGDISKVESVFDEIKRKNV 234

Query: 435 EFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKAND 494
              +  ++ +I+  C+AG +  A E+F +    G+ P   TY  +I+G C+ G++E A  
Sbjct: 235 AGDVYFYSAVINAYCRAGNVRRASEVFDECVGNGIEPNERTYGALINGFCKIGQIEAAEM 294

Query: 495 FLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVEL 530
            L  M+  G   N + FNT++ G+ ++    K +E+
Sbjct: 295 LLTDMQLRGVGHNQIIFNTMIDGYCRHGMVDKALEI 330



 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 43/168 (25%), Positives = 80/168 (47%)

Query: 367 TVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLF 426
           T ++ + ++ G  +AG+   A++L DEM  + V+ +   YN L+D   +        ++ 
Sbjct: 132 TPLSASVVVDGFCKAGRMDDARRLLDEMPRHGVKLNACCYNPLLDTYTRQKNDARVAEVL 191

Query: 427 HMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRK 486
             +E    E  +  +  L+DGL  AG +     +F ++ +K +   V  YS +I+  CR 
Sbjct: 192 KEMESGGVEPTVGTYTILVDGLSTAGDISKVESVFDEIKRKNVAGDVYFYSAVINAYCRA 251

Query: 487 GKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKM 534
           G + +A++       NG  PN  T+  L++GF +  +      LL  M
Sbjct: 252 GNVRRASEVFDECVGNGIEPNERTYGALINGFCKIGQIEAAEMLLTDM 299



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 38/149 (25%), Positives = 68/149 (45%), Gaps = 13/149 (8%)

Query: 55  NLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLN 114
           ++ EAR  F  M      P + ++N++     K+        F +++   GL+PD  T  
Sbjct: 393 DMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKSGSIREAERFKKEMEKKGLVPDVYTYA 452

Query: 115 ILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRL 174
            L++       G CV  ++  A  LF+ M   G +P+V+ Y  LI+G  + G    A + 
Sbjct: 453 ALVH-------GHCVNGKVDVALRLFEEMKQRGAKPNVVAYTALISGLAKEGRSEEAFQF 505

Query: 175 HKKMVSGDYENGLISKTNIFSYSIIIDSL 203
           +  M++     GL     +  YS+++ SL
Sbjct: 506 YDNMLAA----GLTPDDTL--YSMLVGSL 528


>gi|449461475|ref|XP_004148467.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Cucumis sativus]
          Length = 775

 Score =  208 bits (529), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 141/544 (25%), Positives = 245/544 (45%), Gaps = 72/544 (13%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
           PP  +F  +  A  K  +    +     +V+ G   +      L+       +G C++  
Sbjct: 226 PPEGTFTSVITACVKEGNVAEALRLKDDMVNCGKSMNLAVATSLM-------KGYCMQGN 278

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISK-- 190
           ++ A  L   +   G+ P+ +TY  LI+G C+ GN+  A   + +M +    + + S   
Sbjct: 279 LRSALVLVNEISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNS 338

Query: 191 --------------------------TNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGI 224
                                      N+F+++ ++  LCKEG +++A  L+ E+  +GI
Sbjct: 339 ILEGYLKCQSWQNAFTMFNDALESGLANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGI 398

Query: 225 NPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANG 284
           +P VV    +I G C   N      ++ EMLD G  PN +TF +++D   K G I  A  
Sbjct: 399 SPNVVSYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFS 458

Query: 285 LLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYC 344
           +   M    + P   T   ++ G C  GR    R++F    S+G   T + YN +I+G+ 
Sbjct: 459 IFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFI 518

Query: 345 KILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLS 404
           K  N+  A ++YR++   G+  + +TY +L+ G  +      A KL ++MK   ++ D+ 
Sbjct: 519 KEGNINLASNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIK 578

Query: 405 TYNILIDGLCKN-----------------------------------NCVQEAVKLFHML 429
            Y  LIDG CK                                    N V+EA+ L+  +
Sbjct: 579 AYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKM 638

Query: 430 EMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKL 489
                   ++ +  LIDGL K+GRL  A ++  ++  KG++P    ++++I+GLC KG+ 
Sbjct: 639 VNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQF 698

Query: 490 EKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFS 549
           E A   L  M      P+V+ +NTL+ G  +     +   L  +M   +R LVPD+ T+ 
Sbjct: 699 ENARKILEDMNGKNMIPSVLIYNTLIAGHFKEGNLQEAFRLHDEML--DRGLVPDNITYD 756

Query: 550 IVVD 553
           I+V+
Sbjct: 757 ILVN 760



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 134/469 (28%), Positives = 224/469 (47%), Gaps = 51/469 (10%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CK+G  N+ +A  F+  M        + S N +     K + +    + +   +  GL  
Sbjct: 309 CKNG--NIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFNDALESGL-A 365

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           +  T N L++        LC E ++ EA  L+  +IA G+ P+V++Y  +I G CR  N+
Sbjct: 366 NVFTFNTLLSW-------LCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNI 418

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
           + A +++K+M+    +NG     N  +++I++D   K+G ++ A  +F  MK   I P  
Sbjct: 419 NAACKVYKEML----DNGFTP--NAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTD 472

Query: 229 VVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLEL 288
                +I G C AG   E   LF + +  G  P  + +N +ID   K G IN A+ +   
Sbjct: 473 TTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYRE 532

Query: 289 MIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCK--- 345
           M + G+ P   TY SL+DG+C    ID A ++   M  KG K  + +Y  LI+G+CK   
Sbjct: 533 MCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRD 592

Query: 346 --------------------------------ILNVEEAMSLYRQIISNGVRQTVITYNT 373
                                           + NVEEA+ LY+++++ G+   + TY +
Sbjct: 593 MKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTS 652

Query: 374 LLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNK 433
           L+ GL ++G+  YA  +  EM    + PD   + +LI+GLC     + A K+   +    
Sbjct: 653 LIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFENARKILEDMNGKN 712

Query: 434 FEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHG 482
               + I+N LI G  K G L  A+ L  ++  +GLVP  +TY I+++G
Sbjct: 713 MIPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLDRGLVPDNITYDILVNG 761



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 134/505 (26%), Positives = 237/505 (46%), Gaps = 67/505 (13%)

Query: 127 LCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVS------ 180
           LC++     A  L + M A G  P   T+ ++I    + GN++ ALRL   MV+      
Sbjct: 203 LCLKPNSGYALSLLREMRAAGWIPPEGTFTSVITACVKEGNVAEALRLKDDMVNCGKSMN 262

Query: 181 --------------GDYENGL-----ISKT----NIFSYSIIIDSLCKEGLVDKAKELFL 217
                         G+  + L     IS++    N  +YS++ID  CK G ++KA E + 
Sbjct: 263 LAVATSLMKGYCMQGNLRSALVLVNEISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYS 322

Query: 218 EMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGG 277
           EMK +GI  +V    +++ G+    +W+    +F + L+ G   N+ TFN ++  LCK G
Sbjct: 323 EMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFNDALESG-LANVFTFNTLLSWLCKEG 381

Query: 278 KINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYN 337
           K+NEA  L + +I +G++P+  +YN+++ G+C    I+ A +++  M   G     V++ 
Sbjct: 382 KMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFT 441

Query: 338 ILINGYCKILNVEEAMS-----------------------------------LYRQIISN 362
           IL++GY K  ++E A S                                   L+ + +S 
Sbjct: 442 ILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQ 501

Query: 363 GVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEA 422
           G   T + YNT++ G  + G    A  ++ EM    + P   TY  LIDG CK N +  A
Sbjct: 502 GFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLA 561

Query: 423 VKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHG 482
           +KL + ++    +  I+ +  LIDG CK   + +A EL ++L   GL P    Y+ MI G
Sbjct: 562 LKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITG 621

Query: 483 LCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLV 542
                 +E+A D    M   G   ++ T+ +L+ G L++ +     ++  +M    + ++
Sbjct: 622 FKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEML--SKGIL 679

Query: 543 PDDTTFSIVVDLLAKDEKYHECSAV 567
           PDD   +++++ L    ++     +
Sbjct: 680 PDDRAHTVLINGLCNKGQFENARKI 704



 Score =  155 bits (391), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 106/405 (26%), Positives = 186/405 (45%), Gaps = 40/405 (9%)

Query: 187 LISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEE 246
           L+  T ++++ + I    +EG + +A++ FL+ K RG+       +  +H  C   N   
Sbjct: 156 LVECTKLYNFPLDI----QEGNILEAEQHFLQAKARGVELDQEAYSIFVHLLCLKPNSGY 211

Query: 247 VNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMD 306
              L  EM   G  P   TF  +I    K G + EA  L + M+  G + +     SLM 
Sbjct: 212 ALSLLREMRAAGWIPPEGTFTSVITACVKEGNVAEALRLKDDMVNCGKSMNLAVATSLMK 271

Query: 307 GYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQ 366
           GYC+ G + +A  +   +   G     V+Y++LI+G CK  N+E+A   Y ++ + G+R 
Sbjct: 272 GYCMQGNLRSALVLVNEISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRS 331

Query: 367 T----------------------------------VITYNTLLSGLFQAGQAGYAQKLFD 392
           +                                  V T+NTLLS L + G+   A  L+D
Sbjct: 332 SVYSLNSILEGYLKCQSWQNAFTMFNDALESGLANVFTFNTLLSWLCKEGKMNEACNLWD 391

Query: 393 EMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAG 452
           E+    + P++ +YN +I G C+ + +  A K++  +  N F      F  L+DG  K G
Sbjct: 392 EVIAKGISPNVVSYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKG 451

Query: 453 RLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFN 512
            ++NA+ +FH++    ++PT  T  I+I GLC+ G+  +  D        G  P  + +N
Sbjct: 452 DIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYN 511

Query: 513 TLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAK 557
           T++ GF++    +    +  +M E    + P   T++ ++D   K
Sbjct: 512 TIIDGFIKEGNINLASNVYREMCEV--GITPSTVTYTSLIDGFCK 554


>gi|125524465|gb|EAY72579.1| hypothetical protein OsI_00445 [Oryza sativa Indica Group]
          Length = 1014

 Score =  208 bits (529), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 140/477 (29%), Positives = 240/477 (50%), Gaps = 17/477 (3%)

Query: 84  AVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNM 143
           A  ++R+ D       ++ S G+    +  N+L+        GLC   R++EA  +   M
Sbjct: 207 AYCESRNLDGARGLVVRMESEGVKASAVPYNVLM-------YGLCKNMRVQEAVEVKNVM 259

Query: 144 IAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSL 203
           +  GV  D +TY TL+ GFCR   L +ALR+   M+   +   + S+ N    S +ID L
Sbjct: 260 VNIGVTADEVTYRTLVYGFCRMEELEMALRITHDMIRLGF---VPSEANC---SFMIDEL 313

Query: 204 CKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNL 263
            K+ LV++A  L  ++   G+ P V     LI   C    +++ + LF EM   G  PN 
Sbjct: 314 RKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNE 373

Query: 264 LTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLS 323
           +T+ ++I  LCK G I +A  L + M  +G+    + YNSL++GYC  G +D AR +   
Sbjct: 374 VTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSG 433

Query: 324 MHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQ 383
           M  +G   T  SY+ LI G C+  ++  AM L+R++   G+     T+  L++G  +  +
Sbjct: 434 MVKEGLTPTAASYSPLIAGLCRNGDLSSAMELHREMAERGIAWNNYTFTALINGFCKDKK 493

Query: 384 AGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLF-HMLEMNKFEFGIEIFN 442
              A +LFD+M   NV P+  T+N++I+G C    +++A +L+  M+EM   +     + 
Sbjct: 494 MDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMG-LKPDNYTYR 552

Query: 443 CLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKN 502
            LI GLC    +  A E    L     V    + + +++GL R+G+  +       M   
Sbjct: 553 SLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGLFREGRFTETYHLWDEMAVR 612

Query: 503 GCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDE 559
           G   ++V+F  +++  L+ +   K   L  +M E  + + PDD  ++ ++D L+K+E
Sbjct: 613 GVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKE--QGVKPDDIFYTCMIDALSKEE 667



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 141/519 (27%), Positives = 237/519 (45%), Gaps = 49/519 (9%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
           P  ++ + +   + K    +   S   KL  +G++P+    N LI+        LC   R
Sbjct: 301 PSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALID-------KLCKNER 353

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
             +A  LFK M   G+ P+ +TY  LI+  C+ G +  AL L  KM     + G+  K  
Sbjct: 354 FDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKM----RDKGI--KVT 407

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
           ++ Y+ +I+  CK+G +D+A+ L   M   G+ P     + LI G C  G+      L  
Sbjct: 408 VYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSAMELHR 467

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
           EM + G   N  TF  +I+  CK  K++EA  L + MI   + P+  T+N +++GYCLVG
Sbjct: 468 EMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVG 527

Query: 313 RIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYN 372
            I  A +++  M   G K    +Y  LI+G C    V +A      + ++       +  
Sbjct: 528 NIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLT 587

Query: 373 TLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMN 432
            LL GLF+ G+      L+DEM +  V+ DL ++ I++    K +  +++  LF  ++  
Sbjct: 588 ALLYGLFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQ 647

Query: 433 KFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKA 492
             +     + C+ID L K   +  A   + ++   G  P  VT++++I+ LC+ G L  A
Sbjct: 648 GVKPDDIFYTCMIDALSKEENMIQALNCWDQMVIDGYSPNTVTHTVLINNLCKSGYLGSA 707

Query: 493 -------------------NDFLLY------MEK---------NGCAPNVVTFNTLMHGF 518
                              N FL Y      MEK          G   ++V+FN L+ G 
Sbjct: 708 ELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQGHLASIVSFNILIKGL 767

Query: 519 LQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAK 557
            +  K  + ++L+ K+ E      PD  ++S ++  L K
Sbjct: 768 CKAGKIQEAIDLMRKITES--GFSPDCISYSTIIHELCK 804



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 130/506 (25%), Positives = 225/506 (44%), Gaps = 68/506 (13%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILIN------------CF 120
           P + ++N L   + KN  +D     ++++   GL P+ +T  ILI+            C 
Sbjct: 336 PNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCL 395

Query: 121 GNKER----------------GLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCR 164
            +K R                G C +  +  A  L   M+  G+ P   +Y  LI G CR
Sbjct: 396 FDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCR 455

Query: 165 TGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGI 224
            G+LS A+ LH++M     E G+    N ++++ +I+  CK+  +D+A  LF +M    +
Sbjct: 456 NGDLSSAMELHREMA----ERGI--AWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNV 509

Query: 225 NPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANG 284
            P  V    +I G+C  GN  +   L+ +M+++G +P+  T+  +I  LC    +++AN 
Sbjct: 510 IPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANE 569

Query: 285 LLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYC 344
            +  +       + F+  +L+ G    GR      ++  M  +G K  +VS+ I++    
Sbjct: 570 FVADLENSYAVLNNFSLTALLYGLFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAAL 629

Query: 345 KILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLS 404
           K  + E++  L+R++   GV+   I Y  ++  L +      A   +D+M +    P+  
Sbjct: 630 KQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVIDGYSPNTV 689

Query: 405 TYNILIDGLCKN-------------------------NCV---------QEAVKLFHMLE 430
           T+ +LI+ LCK+                         NC           E  K  H   
Sbjct: 690 THTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAM 749

Query: 431 MNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLE 490
           +      I  FN LI GLCKAG++  A +L  K+ + G  P  ++YS +IH LC+ G + 
Sbjct: 750 LQGHLASIVSFNILIKGLCKAGKIQEAIDLMRKITESGFSPDCISYSTIIHELCKMGDIN 809

Query: 491 KANDFLLYMEKNGCAPNVVTFNTLMH 516
           KA +    M   G  P+VV +N  + 
Sbjct: 810 KAFELWNEMLYKGLKPDVVAYNIFIR 835



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 127/442 (28%), Positives = 215/442 (48%), Gaps = 11/442 (2%)

Query: 125 RGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYE 184
           R  C    +  A  L   M + GV+   + Y  L+ G C+   +  A+ +   MV+    
Sbjct: 206 RAYCESRNLDGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVN---- 261

Query: 185 NGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNW 244
             +    +  +Y  ++   C+   ++ A  +  +M   G  P+   C+ +I         
Sbjct: 262 --IGVTADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELV 319

Query: 245 EEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSL 304
           EE   L  ++ DLG  PN+  +N +ID LCK  + ++A+ L + M  RGL P+  TY  L
Sbjct: 320 EEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAIL 379

Query: 305 MDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGV 364
           +   C  G I+ A  +F  M  KG K TV  YN LINGYCK  +++ A  L   ++  G+
Sbjct: 380 IHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGL 439

Query: 365 RQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVK 424
             T  +Y+ L++GL + G    A +L  EM    +  +  T+  LI+G CK+  + EA +
Sbjct: 440 TPTAASYSPLIAGLCRNGDLSSAMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAAR 499

Query: 425 LF-HMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGL 483
           LF  M++ N     +  FN +I+G C  G +  A++L+ ++ + GL P   TY  +I GL
Sbjct: 500 LFDKMIDSNVIPNEV-TFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGL 558

Query: 484 CRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVP 543
           C    + KAN+F+  +E +    N  +   L++G  +  + ++   L  +MA   R +  
Sbjct: 559 CLTSGVSKANEFVADLENSYAVLNNFSLTALLYGLFREGRFTETYHLWDEMA--VRGVKL 616

Query: 544 DDTTFSIVV-DLLAKDEKYHEC 564
           D  +F+I+V   L + +K   C
Sbjct: 617 DLVSFTIIVYAALKQHDKEKSC 638



 Score =  178 bits (452), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 113/363 (31%), Positives = 188/363 (51%), Gaps = 2/363 (0%)

Query: 191 TNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGL 250
            N ++ S I+ SL K      A++LF +M   G++    V T  I  +C + N +   GL
Sbjct: 161 VNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGL 220

Query: 251 FIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCL 310
            + M   G + + + +NV++  LCK  ++ EA  +  +M+  G+  D  TY +L+ G+C 
Sbjct: 221 VVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCR 280

Query: 311 VGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVIT 370
           +  ++ A  I   M   G   +  + + +I+   K   VEEA SL  ++   G+   V  
Sbjct: 281 MEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFA 340

Query: 371 YNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLE 430
           YN L+  L +  +   A +LF EM    +EP+  TY ILI  LCK   +++A+ LF  + 
Sbjct: 341 YNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMR 400

Query: 431 MNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLE 490
               +  +  +N LI+G CK G LD A  L   + ++GL PT  +YS +I GLCR G L 
Sbjct: 401 DKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLS 460

Query: 491 KANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSI 550
            A +    M + G A N  TF  L++GF ++ K  +   L  KM +   N++P++ TF++
Sbjct: 461 SAMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDS--NVIPNEVTFNV 518

Query: 551 VVD 553
           +++
Sbjct: 519 MIE 521



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 120/393 (30%), Positives = 191/393 (48%), Gaps = 6/393 (1%)

Query: 139 LFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSI 198
           LF  M+  GV  D   Y   I  +C + NL  A  L  +M S     G+  K +   Y++
Sbjct: 185 LFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLVVRMES----EGV--KASAVPYNV 238

Query: 199 IIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLG 258
           ++  LCK   V +A E+   M   G+    V   TL++GFC     E    +  +M+ LG
Sbjct: 239 LMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMALRITHDMIRLG 298

Query: 259 PRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAR 318
             P+    + MID L K   + EA  L   +   G+ P+ F YN+L+D  C   R D A 
Sbjct: 299 FVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDAD 358

Query: 319 EIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGL 378
            +F  M  +G +   V+Y ILI+  CK   +E+A+ L+ ++   G++ TV  YN+L++G 
Sbjct: 359 RLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGY 418

Query: 379 FQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGI 438
            + G    A+ L   M    + P  ++Y+ LI GLC+N  +  A++L   +      +  
Sbjct: 419 CKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSAMELHREMAERGIAWNN 478

Query: 439 EIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLY 498
             F  LI+G CK  ++D A  LF K+    ++P  VT+++MI G C  G + KA      
Sbjct: 479 YTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQ 538

Query: 499 MEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELL 531
           M + G  P+  T+ +L+ G    +  SK  E +
Sbjct: 539 MVEMGLKPDNYTYRSLISGLCLTSGVSKANEFV 571



 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 120/506 (23%), Positives = 217/506 (42%), Gaps = 76/506 (15%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
           N  ++  CK G  +L+ AR     M     +P  +S++ L   + +N    + +  +R++
Sbjct: 412 NSLINGYCKQG--SLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSAMELHREM 469

Query: 102 VSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLING 161
              G+  +  T   LIN       G C + ++ EA  LF  MI   V P+ +T+  +I G
Sbjct: 470 AERGIAWNNYTFTALIN-------GFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEG 522

Query: 162 FCRTGNLSVALRLHKKMVS------------------------------GDYENGLISKT 191
           +C  GN+  A +L+ +MV                                D EN      
Sbjct: 523 YCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLN 582

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
           N FS + ++  L +EG   +   L+ EM  RG+   +V  T +++      + E+   LF
Sbjct: 583 N-FSLTALLYGLFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLF 641

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
            EM + G +P+ + +  MID L K   + +A    + M+  G +P+  T+  L++  C  
Sbjct: 642 REMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVIDGYSPNTVTHTVLINNLCKS 701

Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
           G + +A  +   M +        +YN  ++ +    ++E+A  L+  ++  G   +++++
Sbjct: 702 GYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAML-QGHLASIVSF 760

Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
           N L+ GL +AG+   A  L  ++      PD  +Y+ +I  LC                 
Sbjct: 761 NILIKGLCKAGKIQEAIDLMRKITESGFSPDCISYSTIIHELC----------------- 803

Query: 432 NKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEK 491
                             K G ++ A+EL++++  KGL P VV Y+I I      G+ +K
Sbjct: 804 ------------------KMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDK 845

Query: 492 ANDFLLYMEKNGCAPNVVTFNTLMHG 517
           A      M ++G  PN  T+  L+ G
Sbjct: 846 ALGIYTNMIRSGVQPNWDTYRALLSG 871



 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 99/346 (28%), Positives = 166/346 (47%), Gaps = 37/346 (10%)

Query: 255 LDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRI 314
           L  G   N  T + ++  L K  +   A  L + M+Q G++ D + Y + +  YC    +
Sbjct: 155 LSSGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNL 214

Query: 315 DTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTL 374
           D AR + + M S+G K + V YN+L+ G CK + V+EA+ +   +++ GV    +TY TL
Sbjct: 215 DGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTL 274

Query: 375 LSGLFQAGQAGYAQKLFDEM-----------------KLYNVE----------------- 400
           + G  +  +   A ++  +M                 +L   E                 
Sbjct: 275 VYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGM 334

Query: 401 -PDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWE 459
            P++  YN LID LCKN    +A +LF  +     E     +  LI  LCK G +++A  
Sbjct: 335 VPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALC 394

Query: 460 LFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFL 519
           LF K+  KG+  TV  Y+ +I+G C++G L++A   L  M K G  P   +++ L+ G  
Sbjct: 395 LFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLC 454

Query: 520 QNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECS 565
           +N   S  +EL  +MA  ER +  ++ TF+ +++   KD+K  E +
Sbjct: 455 RNGDLSSAMELHREMA--ERGIAWNNYTFTALINGFCKDKKMDEAA 498



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 91/400 (22%), Positives = 173/400 (43%), Gaps = 70/400 (17%)

Query: 77  SFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEA 136
           +F  L     K++  D     + K++   ++P+ +T N++I        G C+   I++A
Sbjct: 480 TFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMI-------EGYCLVGNIRKA 532

Query: 137 TWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKM---------------VSG 181
             L+  M+  G++PD  TY +LI+G C T  +S A      +               + G
Sbjct: 533 FQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYG 592

Query: 182 DYENGLISKT--------------NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPA 227
            +  G  ++T              ++ S++II+ +  K+   +K+  LF EMK +G+ P 
Sbjct: 593 LFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPD 652

Query: 228 VVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLE 287
            +  T +I       N  +    + +M+  G  PN +T  V+I+ LCK G +  A  L +
Sbjct: 653 DIFYTCMIDALSKEENMIQALNCWDQMVIDGYSPNTVTHTVLINNLCKSGYLGSAELLCK 712

Query: 288 LMIQRGLNPDRFTYNSLMD----------------------------------GYCLVGR 313
            M+   + P++FTYN  +D                                  G C  G+
Sbjct: 713 EMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQGHLASIVSFNILIKGLCKAGK 772

Query: 314 IDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNT 373
           I  A ++   +   G     +SY+ +I+  CK+ ++ +A  L+ +++  G++  V+ YN 
Sbjct: 773 IQEAIDLMRKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNI 832

Query: 374 LLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGL 413
            +      G++  A  ++  M    V+P+  TY  L+ G+
Sbjct: 833 FIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSGI 872



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 75/274 (27%), Positives = 132/274 (48%), Gaps = 14/274 (5%)

Query: 77  SFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEA 136
           SF ++  A  K    +     +R++   G+ PD +    +I+    +E  +       +A
Sbjct: 620 SFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMI-------QA 672

Query: 137 TWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSY 196
              +  M+  G  P+ +T+  LIN  C++G L  A  L K+M++G+         N F+Y
Sbjct: 673 LNCWDQMVIDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNV------LPNKFTY 726

Query: 197 SIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLD 256
           +  +D    EG ++KAK+L   M  +G   ++V    LI G C AG  +E   L  ++ +
Sbjct: 727 NCFLDYFATEGDMEKAKDLHSAML-QGHLASIVSFNILIKGLCKAGKIQEAIDLMRKITE 785

Query: 257 LGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDT 316
            G  P+ ++++ +I  LCK G IN+A  L   M+ +GL PD   YN  +    + G  D 
Sbjct: 786 SGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDK 845

Query: 317 AREIFLSMHSKGCKHTVVSYNILINGYCKILNVE 350
           A  I+ +M   G +    +Y  L++G   +L+ +
Sbjct: 846 ALGIYTNMIRSGVQPNWDTYRALLSGISLMLHYD 879



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 68/254 (26%), Positives = 121/254 (47%), Gaps = 14/254 (5%)

Query: 62  FFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFG 121
            F  M      P    +  +  A++K  +    ++ + ++V  G  P+ +T  +LIN   
Sbjct: 640 LFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVIDGYSPNTVTHTVLIN--- 696

Query: 122 NKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSG 181
                LC    +  A  L K M+A  V P+  TY   ++ F   G++  A  LH  M+ G
Sbjct: 697 ----NLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQG 752

Query: 182 DYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCA 241
                     +I S++I+I  LCK G + +A +L  ++   G +P  +  +T+IH  C  
Sbjct: 753 HL-------ASIVSFNILIKGLCKAGKIQEAIDLMRKITESGFSPDCISYSTIIHELCKM 805

Query: 242 GNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTY 301
           G+  +   L+ EML  G +P+++ +N+ I      G+ ++A G+   MI+ G+ P+  TY
Sbjct: 806 GDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTY 865

Query: 302 NSLMDGYCLVGRID 315
            +L+ G  L+   D
Sbjct: 866 RALLSGISLMLHYD 879



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 50/210 (23%), Positives = 94/210 (44%), Gaps = 2/210 (0%)

Query: 360 ISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCV 419
           +S+G+     T + +L  L +  Q   A+ LFD+M    V  D   Y   I   C++  +
Sbjct: 155 LSSGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNL 214

Query: 420 QEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIM 479
             A  L   +E    +     +N L+ GLCK  R+  A E+ + +   G+    VTY  +
Sbjct: 215 DGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTL 274

Query: 480 IHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPER 539
           ++G CR  +LE A      M + G  P+    + ++    +     +   L  K+   + 
Sbjct: 275 VYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLG--DL 332

Query: 540 NLVPDDTTFSIVVDLLAKDEKYHECSAVSK 569
            +VP+   ++ ++D L K+E++ +   + K
Sbjct: 333 GMVPNVFAYNALIDKLCKNERFDDADRLFK 362


>gi|222637127|gb|EEE67259.1| hypothetical protein OsJ_24425 [Oryza sativa Japonica Group]
          Length = 799

 Score =  208 bits (529), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 132/456 (28%), Positives = 219/456 (48%), Gaps = 34/456 (7%)

Query: 125 RGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYE 184
           + LC   RIK+A  LF  M +    PDV+TYG +++G+C    L  A++L  +M +   E
Sbjct: 261 KALCTAGRIKDAHQLFDEMAS---PPDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLE 317

Query: 185 NGLISKTNIFS-----------------------------YSIIIDSLCKEGLVDKAKEL 215
              ++ T++ +                             ++ ++   C++G +  A+  
Sbjct: 318 LNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNW 377

Query: 216 FLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCK 275
           F EM+ RG+    V  T LI+G C AG  +E   +  EM D G   + +T+ V+ID  CK
Sbjct: 378 FDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCK 437

Query: 276 GGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVS 335
            GK+ EA  +   M+Q+ + P+  TY +L DG C  G +  A E+   M SKG +  + +
Sbjct: 438 VGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFT 497

Query: 336 YNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMK 395
           YN LING CK  N+E+AM     +   G++  V TY T++  L Q+ +   A  L  EM 
Sbjct: 498 YNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEML 557

Query: 396 LYNVEPDLSTYNILIDGLCKNNCVQEAVKLFH-MLEMNKFEFGIEIFNCLIDGLCKAGRL 454
              ++P + TYN+L++G C +  V+   +L   MLE N        +N L+   C    +
Sbjct: 558 DKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKN-IHPNTTTYNSLMKQYCIEKNM 616

Query: 455 DNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTL 514
            +  E++  +  + +VP   TY+I+I G C+   +++A  F   M + G      ++N L
Sbjct: 617 KSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNAL 676

Query: 515 MHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSI 550
           +    +  K ++   L  KM +      PD   F I
Sbjct: 677 IRLLNKKKKFTEARRLFEKMRKERLTAEPDVYNFYI 712



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 113/382 (29%), Positives = 187/382 (48%), Gaps = 13/382 (3%)

Query: 93  AVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDV 152
           A  +++ ++   GL  D +T   LIN       GLC    +KEA  + + M   G+  D 
Sbjct: 373 AARNWFDEMQKRGLAADGVTYTALIN-------GLCRAGELKEAERVLQEMEDKGLDVDA 425

Query: 153 ITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKA 212
           +TY  LI+G+C+ G ++ A  +H KMV            N+ +Y+ + D LCK+G V  A
Sbjct: 426 VTYTVLIDGYCKVGKMTEAFLVHNKMVQKRV------TPNVVTYTALSDGLCKQGDVCAA 479

Query: 213 KELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDC 272
            EL  EM  +G+   +    +LI+G C AGN E+     I+M + G +P++ T+  +I  
Sbjct: 480 NELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGA 539

Query: 273 LCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHT 332
           LC+  +++ A+ LL+ M+ +G+ P   TYN LM+G+C+ GR++  + +   M  K     
Sbjct: 540 LCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPN 599

Query: 333 VVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFD 392
             +YN L+  YC   N++    +Y+ ++S  V     TYN L+ G  +A     A     
Sbjct: 600 TTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHS 659

Query: 393 EMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAG 452
           EM         S+YN LI  L K     EA +LF  +   +     +++N  ID      
Sbjct: 660 EMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRKERLTAEPDVYNFYIDLSFNED 719

Query: 453 RLDNAWELFHKLPQKGLVPTVV 474
            L++   L  +L +  LV ++ 
Sbjct: 720 NLESTLALCDELVEVTLVKSIA 741



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 69/265 (26%), Positives = 109/265 (41%), Gaps = 31/265 (11%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
           NE LHE C  G + LN                 I ++N L   + K  + +  +     +
Sbjct: 480 NELLHEMCSKG-LELN-----------------IFTYNSLINGLCKAGNLEQAMRTMIDM 521

Query: 102 VSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLING 161
              GL PD  T   +I         LC    +  A  L + M+  G++P ++TY  L+NG
Sbjct: 522 DEAGLKPDVYTYTTIIG-------ALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNG 574

Query: 162 FCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKG 221
           FC +G +    RL + M+  +         N  +Y+ ++   C E  +    E++  M  
Sbjct: 575 FCMSGRVEGGKRLLEWMLEKNIH------PNTTTYNSLMKQYCIEKNMKSTTEIYKGMLS 628

Query: 222 RGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINE 281
           + + P       LI G C A N +E      EM++ G R    ++N +I  L K  K  E
Sbjct: 629 QEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTE 688

Query: 282 ANGLLELMIQRGLNPDRFTYNSLMD 306
           A  L E M +  L  +   YN  +D
Sbjct: 689 ARRLFEKMRKERLTAEPDVYNFYID 713


>gi|15225722|ref|NP_180822.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75160493|sp|Q8S8P6.1|PP180_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g32630
 gi|20197234|gb|AAM14987.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|330253613|gb|AEC08707.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 624

 Score =  207 bits (528), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 132/448 (29%), Positives = 224/448 (50%), Gaps = 13/448 (2%)

Query: 56  LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNI 115
             E    F YM     S    S  +   A  K R  D  +  +R++V  G+     +L I
Sbjct: 170 FEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSGVKITVYSLTI 229

Query: 116 LINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLH 175
           ++        GLC    ++++  L K     G++P+  TY T+IN + +  + S    + 
Sbjct: 230 VV-------EGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVL 282

Query: 176 KKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLI 235
           K M     ++G++   N  +Y+++++   K G +  A++LF EM+ RGI   V V T+LI
Sbjct: 283 KVM----KKDGVV--YNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLI 336

Query: 236 HGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLN 295
              C  GN +    LF E+ + G  P+  T+  +ID +CK G++  A  L+  M  +G+N
Sbjct: 337 SWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVN 396

Query: 296 PDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSL 355
             +  +N+L+DGYC  G +D A  I+  M  KG +  V + N + + + ++   +EA   
Sbjct: 397 ITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQW 456

Query: 356 YRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCK 415
             +++  GV+ + ++Y  L+    + G    A++LF EM    V+P+  TYN++I   CK
Sbjct: 457 LFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCK 516

Query: 416 NNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVT 475
              ++EA KL   +E N  +     +  LI G C A  +D A  LF ++  KGL    VT
Sbjct: 517 QGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVT 576

Query: 476 YSIMIHGLCRKGKLEKANDFLLYMEKNG 503
           Y++MI GL + GK ++A      M++ G
Sbjct: 577 YTVMISGLSKAGKSDEAFGLYDEMKRKG 604



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 107/377 (28%), Positives = 188/377 (49%), Gaps = 15/377 (3%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVEN- 131
           P   ++N +  A  K R +  V    + +   G++ + +T  +L+         L V+N 
Sbjct: 257 PEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLME--------LSVKNG 308

Query: 132 RIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKT 191
           ++ +A  LF  M   G+  DV  Y +LI+  CR GN+  A  L  ++     E GL   +
Sbjct: 309 KMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELT----EKGLSPSS 364

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
             ++Y  +ID +CK G +  A+ L  EM+ +G+N   VV  TLI G+C  G  +E + ++
Sbjct: 365 --YTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIY 422

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
             M   G + ++ T N +  C  +  + +EA   L  M++ G+     +Y +L+D YC  
Sbjct: 423 DVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKE 482

Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
           G ++ A+ +F+ M SKG +   ++YN++I  YCK   ++EA  L   + +NG+     TY
Sbjct: 483 GNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTY 542

Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
            +L+ G   A     A +LF EM L  ++ +  TY ++I GL K     EA  L+  ++ 
Sbjct: 543 TSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKR 602

Query: 432 NKFEFGIEIFNCLIDGL 448
             +    +++  LI  +
Sbjct: 603 KGYTIDNKVYTALIGSM 619



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 103/397 (25%), Positives = 183/397 (46%), Gaps = 41/397 (10%)

Query: 205 KEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLL 264
           K   +D   E+F  M   G+   V   T ++ G C  G  E+   L  E    G +P   
Sbjct: 201 KRRRIDLCLEIFRRMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAY 260

Query: 265 TFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSM 324
           T+N +I+   K    +   G+L++M + G+  ++ TY  LM+     G++  A ++F  M
Sbjct: 261 TYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEM 320

Query: 325 HSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQA 384
             +G +  V  Y  LI+  C+  N++ A  L+ ++   G+  +  TY  L+ G+ + G+ 
Sbjct: 321 RERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEM 380

Query: 385 GYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNC- 443
           G A+ L +EM+   V      +N LIDG C+   V EA  ++ ++E   F+   ++F C 
Sbjct: 381 GAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQ--ADVFTCN 438

Query: 444 ------------------------------------LIDGLCKAGRLDNAWELFHKLPQK 467
                                               LID  CK G ++ A  LF ++  K
Sbjct: 439 TIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSK 498

Query: 468 GLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKV 527
           G+ P  +TY++MI+  C++GK+++A      ME NG  P+  T+ +L+HG    +   + 
Sbjct: 499 GVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEA 558

Query: 528 VELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHEC 564
           + L  +M    + L  +  T+++++  L+K  K  E 
Sbjct: 559 MRLFSEMG--LKGLDQNSVTYTVMISGLSKAGKSDEA 593



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 59/242 (24%), Positives = 107/242 (44%), Gaps = 35/242 (14%)

Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
           G  +    +F  M  KG      S  + +    K   ++  + ++R+++ +GV+ TV + 
Sbjct: 168 GMFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSGVKITVYSL 227

Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILI--------------------- 410
             ++ GL + G+   ++KL  E  +  ++P+  TYN +I                     
Sbjct: 228 TIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKK 287

Query: 411 DGL--------------CKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDN 456
           DG+               KN  + +A KLF  +     E  + ++  LI   C+ G +  
Sbjct: 288 DGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKR 347

Query: 457 AWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMH 516
           A+ LF +L +KGL P+  TY  +I G+C+ G++  A   +  M+  G     V FNTL+ 
Sbjct: 348 AFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLID 407

Query: 517 GF 518
           G+
Sbjct: 408 GY 409


>gi|115472343|ref|NP_001059770.1| Os07g0513200 [Oryza sativa Japonica Group]
 gi|27818007|dbj|BAC55770.1| putative CRP1 protein [Oryza sativa Japonica Group]
 gi|50509504|dbj|BAD31185.1| putative CRP1 protein [Oryza sativa Japonica Group]
 gi|113611306|dbj|BAF21684.1| Os07g0513200 [Oryza sativa Japonica Group]
 gi|215715304|dbj|BAG95055.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 754

 Score =  207 bits (528), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 132/456 (28%), Positives = 219/456 (48%), Gaps = 34/456 (7%)

Query: 125 RGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYE 184
           + LC   RIK+A  LF  M +    PDV+TYG +++G+C    L  A++L  +M +   E
Sbjct: 261 KALCTAGRIKDAHQLFDEMAS---PPDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLE 317

Query: 185 NGLISKTNIFS-----------------------------YSIIIDSLCKEGLVDKAKEL 215
              ++ T++ +                             ++ ++   C++G +  A+  
Sbjct: 318 LNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNW 377

Query: 216 FLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCK 275
           F EM+ RG+    V  T LI+G C AG  +E   +  EM D G   + +T+ V+ID  CK
Sbjct: 378 FDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCK 437

Query: 276 GGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVS 335
            GK+ EA  +   M+Q+ + P+  TY +L DG C  G +  A E+   M SKG +  + +
Sbjct: 438 VGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFT 497

Query: 336 YNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMK 395
           YN LING CK  N+E+AM     +   G++  V TY T++  L Q+ +   A  L  EM 
Sbjct: 498 YNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEML 557

Query: 396 LYNVEPDLSTYNILIDGLCKNNCVQEAVKLFH-MLEMNKFEFGIEIFNCLIDGLCKAGRL 454
              ++P + TYN+L++G C +  V+   +L   MLE N        +N L+   C    +
Sbjct: 558 DKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKN-IHPNTTTYNSLMKQYCIEKNM 616

Query: 455 DNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTL 514
            +  E++  +  + +VP   TY+I+I G C+   +++A  F   M + G      ++N L
Sbjct: 617 KSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNAL 676

Query: 515 MHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSI 550
           +    +  K ++   L  KM +      PD   F I
Sbjct: 677 IRLLNKKKKFTEARRLFEKMRKERLTAEPDVYNFYI 712



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 113/382 (29%), Positives = 187/382 (48%), Gaps = 13/382 (3%)

Query: 93  AVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDV 152
           A  +++ ++   GL  D +T   LIN       GLC    +KEA  + + M   G+  D 
Sbjct: 373 AARNWFDEMQKRGLAADGVTYTALIN-------GLCRAGELKEAERVLQEMEDKGLDVDA 425

Query: 153 ITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKA 212
           +TY  LI+G+C+ G ++ A  +H KMV            N+ +Y+ + D LCK+G V  A
Sbjct: 426 VTYTVLIDGYCKVGKMTEAFLVHNKMVQKRV------TPNVVTYTALSDGLCKQGDVCAA 479

Query: 213 KELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDC 272
            EL  EM  +G+   +    +LI+G C AGN E+     I+M + G +P++ T+  +I  
Sbjct: 480 NELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGA 539

Query: 273 LCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHT 332
           LC+  +++ A+ LL+ M+ +G+ P   TYN LM+G+C+ GR++  + +   M  K     
Sbjct: 540 LCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPN 599

Query: 333 VVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFD 392
             +YN L+  YC   N++    +Y+ ++S  V     TYN L+ G  +A     A     
Sbjct: 600 TTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHS 659

Query: 393 EMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAG 452
           EM         S+YN LI  L K     EA +LF  +   +     +++N  ID      
Sbjct: 660 EMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRKERLTAEPDVYNFYIDLSFNED 719

Query: 453 RLDNAWELFHKLPQKGLVPTVV 474
            L++   L  +L +  LV ++ 
Sbjct: 720 NLESTLALCDELVEVTLVKSIA 741



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 69/265 (26%), Positives = 109/265 (41%), Gaps = 31/265 (11%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
           NE LHE C  G + LN                 I ++N L   + K  + +  +     +
Sbjct: 480 NELLHEMCSKG-LELN-----------------IFTYNSLINGLCKAGNLEQAMRTMIDM 521

Query: 102 VSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLING 161
              GL PD  T   +I         LC    +  A  L + M+  G++P ++TY  L+NG
Sbjct: 522 DEAGLKPDVYTYTTIIG-------ALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNG 574

Query: 162 FCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKG 221
           FC +G +    RL + M+  +         N  +Y+ ++   C E  +    E++  M  
Sbjct: 575 FCMSGRVEGGKRLLEWMLEKNIH------PNTTTYNSLMKQYCIEKNMKSTTEIYKGMLS 628

Query: 222 RGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINE 281
           + + P       LI G C A N +E      EM++ G R    ++N +I  L K  K  E
Sbjct: 629 QEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTE 688

Query: 282 ANGLLELMIQRGLNPDRFTYNSLMD 306
           A  L E M +  L  +   YN  +D
Sbjct: 689 ARRLFEKMRKERLTAEPDVYNFYID 713


>gi|357442909|ref|XP_003591732.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355480780|gb|AES61983.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 344

 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 119/359 (33%), Positives = 194/359 (54%), Gaps = 26/359 (7%)

Query: 178 MVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHG 237
           M+  D   G +  +++  Y+ IID LCK+ LV+ A EL+ EM    I+P V    +LI+G
Sbjct: 2   MLVNDQIEGKLVNSDVVMYNTIIDGLCKDKLVNDAYELYSEMIAEKISPDVATFNSLIYG 61

Query: 238 FCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPD 297
           FC  G  ++  GLF +M+     P++ TF +++D LCK GK+ EA  ++ +M++ G+ P+
Sbjct: 62  FCIIGQLKDAFGLFSQMVLKNINPSVYTFTILVDGLCKEGKMKEAKSVIAMMMKDGVLPN 121

Query: 298 RFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYR 357
             TY S+M+GYCLV  ++  + +F ++   G      SYNI+ING+CKI  V EA+ L++
Sbjct: 122 VVTYTSIMEGYCLVNEVNKTKHVFRTISRMGVAPNTQSYNIMINGFCKIKIVNEALILFK 181

Query: 358 QIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYN--VEPDLSTYNILIDGLCK 415
           ++   G+    +TY++L+ GL ++   G    L   M + N  + P    Y   ID LCK
Sbjct: 182 EMCCRGIVPITVTYSSLIDGLCKSTMLG--SLLMRCMLMVNHLIYPLTVLY---IDALCK 236

Query: 416 NNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVT 475
           +N + +A+ L   ++                     GRL NA ++F  L  KG    + T
Sbjct: 237 SNHLDKAIALVKKIK-------------------DQGRLKNAQDVFQDLLIKGYSLNIQT 277

Query: 476 YSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKM 534
           Y+IMI+GLC++G  ++A   L  M+  G  P+ VT+ T +      ++  K  +L  KM
Sbjct: 278 YNIMINGLCKEGLFDEAEALLSKMDDYGIIPDAVTYETNIRALFHKDENEKAEKLFRKM 336



 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 94/317 (29%), Positives = 150/317 (47%), Gaps = 54/317 (17%)

Query: 126 GLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYEN 185
           GLC +  + +A  L+  MIA  + PDV T+ +LI GFC  G L  A  L  +MV  +   
Sbjct: 26  GLCKDKLVNDAYELYSEMIAEKISPDVATFNSLIYGFCIIGQLKDAFGLFSQMVLKNIN- 84

Query: 186 GLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWE 245
                 ++++++I++D LCKEG + +AK +   M   G+ P VV  T+++ G+C      
Sbjct: 85  -----PSVYTFTILVDGLCKEGKMKEAKSVIAMMMKDGVLPNVVTYTSIMEGYCLVNEVN 139

Query: 246 EVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLM 305
           +   +F  +  +G  PN  ++N+MI+  CK   +NEA  L + M  RG+ P   TY+SL+
Sbjct: 140 KTKHVFRTISRMGVAPNTQSYNIMINGFCKIKIVNEALILFKEMCCRGIVPITVTYSSLI 199

Query: 306 DGYC------------------------------------------LV------GRIDTA 317
           DG C                                          LV      GR+  A
Sbjct: 200 DGLCKSTMLGSLLMRCMLMVNHLIYPLTVLYIDALCKSNHLDKAIALVKKIKDQGRLKNA 259

Query: 318 REIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSG 377
           +++F  +  KG    + +YNI+ING CK    +EA +L  ++   G+    +TY T +  
Sbjct: 260 QDVFQDLLIKGYSLNIQTYNIMINGLCKEGLFDEAEALLSKMDDYGIIPDAVTYETNIRA 319

Query: 378 LFQAGQAGYAQKLFDEM 394
           LF   +   A+KLF +M
Sbjct: 320 LFHKDENEKAEKLFRKM 336



 Score =  105 bits (261), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 53/158 (33%), Positives = 94/158 (59%), Gaps = 8/158 (5%)

Query: 399 VEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAW 458
           V  D+  YN +IDGLCK+  V +A +L+  +   K    +  FN LI G C  G+L +A+
Sbjct: 13  VNSDVVMYNTIIDGLCKDKLVNDAYELYSEMIAEKISPDVATFNSLIYGFCIIGQLKDAF 72

Query: 459 ELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGF 518
            LF ++  K + P+V T++I++ GLC++GK+++A   +  M K+G  PNVVT+ ++M G+
Sbjct: 73  GLFSQMVLKNINPSVYTFTILVDGLCKEGKMKEAKSVIAMMMKDGVLPNVVTYTSIMEGY 132

Query: 519 L---QNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
               + NKT  V   + +M      + P+  +++I+++
Sbjct: 133 CLVNEVNKTKHVFRTISRMG-----VAPNTQSYNIMIN 165



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 59/200 (29%), Positives = 104/200 (52%), Gaps = 2/200 (1%)

Query: 358 QIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNN 417
           QI    V   V+ YNT++ GL +      A +L+ EM    + PD++T+N LI G C   
Sbjct: 7   QIEGKLVNSDVVMYNTIIDGLCKDKLVNDAYELYSEMIAEKISPDVATFNSLIYGFCIIG 66

Query: 418 CVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYS 477
            +++A  LF  + +      +  F  L+DGLCK G++  A  +   + + G++P VVTY+
Sbjct: 67  QLKDAFGLFSQMVLKNINPSVYTFTILVDGLCKEGKMKEAKSVIAMMMKDGVLPNVVTYT 126

Query: 478 IMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEP 537
            ++ G C   ++ K       + + G APN  ++N +++GF +    ++ + L  +M   
Sbjct: 127 SIMEGYCLVNEVNKTKHVFRTISRMGVAPNTQSYNIMINGFCKIKIVNEALILFKEMC-- 184

Query: 538 ERNLVPDDTTFSIVVDLLAK 557
            R +VP   T+S ++D L K
Sbjct: 185 CRGIVPITVTYSSLIDGLCK 204



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 88/348 (25%), Positives = 159/348 (45%), Gaps = 36/348 (10%)

Query: 34  VSSPETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFN-LLFGAVAKNRHYD 92
           V+S     N  +   CK  ++N  +A   +  M   + SP +++FN L++G     +  D
Sbjct: 13  VNSDVVMYNTIIDGLCKDKLVN--DAYELYSEMIAEKISPDVATFNSLIYGFCIIGQLKD 70

Query: 93  AVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDV 152
           A    + ++V   + P   T  IL++       GLC E ++KEA  +   M+  GV P+V
Sbjct: 71  A-FGLFSQMVLKNINPSVYTFTILVD-------GLCKEGKMKEAKSVIAMMMKDGVLPNV 122

Query: 153 ITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKA 212
           +TY +++ G+C    ++    + + +      + +    N  SY+I+I+  CK  +V++A
Sbjct: 123 VTYTSIMEGYCLVNEVNKTKHVFRTI------SRMGVAPNTQSYNIMINGFCKIKIVNEA 176

Query: 213 KELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDC 272
             LF EM  RGI P  V  ++LI G C +     +    + M++    P  + +   ID 
Sbjct: 177 LILFKEMCCRGIVPITVTYSSLIDGLCKSTMLGSLLMRCMLMVNHLIYPLTVLY---IDA 233

Query: 273 LCKG----------------GKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDT 316
           LCK                 G++  A  + + ++ +G + +  TYN +++G C  G  D 
Sbjct: 234 LCKSNHLDKAIALVKKIKDQGRLKNAQDVFQDLLIKGYSLNIQTYNIMINGLCKEGLFDE 293

Query: 317 AREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGV 364
           A  +   M   G     V+Y   I         E+A  L+R++I+ G+
Sbjct: 294 AEALLSKMDDYGIIPDAVTYETNIRALFHKDENEKAEKLFRKMIARGL 341


>gi|297605515|ref|NP_001057291.2| Os06g0249500 [Oryza sativa Japonica Group]
 gi|255676892|dbj|BAF19205.2| Os06g0249500 [Oryza sativa Japonica Group]
          Length = 690

 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 137/475 (28%), Positives = 228/475 (48%), Gaps = 20/475 (4%)

Query: 77  SFNLLFGAVAKNRHYDAVISFYRKLVS-IGLLPDFLTLNILINCFGNKERGLCVENRIKE 135
           +FN +  A+A+ R    +   Y  +     + PD +T  IL+N       GLC   R+ +
Sbjct: 138 AFNSILAALARVRDVPGMARIYALMQGCASVRPDVVTYGILVN-------GLCKAGRVGD 190

Query: 136 ATWLFKNMIA--FGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNI 193
           A  +   M      +RPDV+T  T+++G C++G +  AL   ++ +S  +        N 
Sbjct: 191 ALRVLDGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEALAFVEQRMSSVHG----CPPNT 246

Query: 194 FSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIE 253
            +Y+ +ID+ C+ G +  A EL  +M+  G+   +V   T++ G C AG        F E
Sbjct: 247 VTYNCLIDAFCRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFRE 306

Query: 254 MLDLGP--RPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
              + P  + N +T++ ++  L     +  A  L    +  G +PD   Y +++ G    
Sbjct: 307 KRTVWPEGKGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQA 366

Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
           GR++ A  +  SM   G K    +YNILI G+C+   + EA  L +++   G+R  V TY
Sbjct: 367 GRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTY 426

Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
           NTLLSG  +AG      +L  +M     +P + T+  L+ G CK   + EA+++   ++ 
Sbjct: 427 NTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDE 486

Query: 432 NKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEK 491
           +       I+N LID LCK G +D A ELF ++ +K +   V T++ ++ GL  K   EK
Sbjct: 487 SGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGLRDKNMPEK 546

Query: 492 ANDFLLYMEKNGCAPNVVTFNTLMHGF----LQNNKTSKVVELLHKMAEPERNLV 542
           A + +  M +  C P+ VT + LM       LQ N     + +    A  ER  V
Sbjct: 547 AFELMDQMREERCFPDYVTVDVLMEWLPVIELQGNNCQGKLCVAEDGASGERKAV 601



 Score = 47.4 bits (111), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 23/89 (25%), Positives = 46/89 (51%), Gaps = 2/89 (2%)

Query: 471 PTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNG--CAPNVVTFNTLMHGFLQNNKTSKVV 528
           P VVTY I+++GLC+ G++  A   L  M +      P+VVT NT++ G  ++ +  + +
Sbjct: 170 PDVVTYGILVNGLCKAGRVGDALRVLDGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEAL 229

Query: 529 ELLHKMAEPERNLVPDDTTFSIVVDLLAK 557
             + +         P+  T++ ++D   +
Sbjct: 230 AFVEQRMSSVHGCPPNTVTYNCLIDAFCR 258



 Score = 40.4 bits (93), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 22/73 (30%), Positives = 37/73 (50%), Gaps = 3/73 (4%)

Query: 497 LYMEKNGCA---PNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
           +Y    GCA   P+VVT+  L++G  +  +    + +L  M+  + ++ PD  T + VVD
Sbjct: 158 IYALMQGCASVRPDVVTYGILVNGLCKAGRVGDALRVLDGMSRQDLDIRPDVVTLNTVVD 217

Query: 554 LLAKDEKYHECSA 566
            L K  +  E  A
Sbjct: 218 GLCKSGRVQEALA 230


>gi|225441858|ref|XP_002278530.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g79540-like [Vitis vinifera]
          Length = 798

 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 145/515 (28%), Positives = 240/515 (46%), Gaps = 63/515 (12%)

Query: 67  THMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERG 126
           +++Q  PP  +F++L  A AK+   +  +  + K+   G  PD  T N +++    KE  
Sbjct: 125 SNIQIPPP--TFSVLIAAYAKSGMAEKAVESFGKMKDFGCKPDVFTYNSILHVMVQKEVF 182

Query: 127 LCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENG 186
           L        A  ++  M+     P+  T+  L+NG C+ G    AL++  +M     + G
Sbjct: 183 LL-------ALAVYNQMLKLNYNPNRATFVILLNGLCKNGKTDDALKMFDEMT----QKG 231

Query: 187 LISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEE 246
           +   T I  Y+II+  LC+    D    L   MK  G  P  + C  L+ GFC  G  +E
Sbjct: 232 IPPNTMI--YTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNALLDGFCKLGQIDE 289

Query: 247 -----------------------VNGLFI------------EMLDLGPRPNLLTFNVMID 271
                                  ++GLF             +M   G  P+++ + ++I 
Sbjct: 290 AFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAGIEPDVVLYTILIR 349

Query: 272 CLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKH 331
             C+ G ++ A  +L  M QRGL+PD + YN+L+ G+C VG +D AR + L +    C  
Sbjct: 350 GFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKARSLQLEISKNDCFP 409

Query: 332 TVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLF 391
           T  +Y ILI G C+   ++EA  ++ Q+ + G   +++T+N L+ GL +AG+   A+ LF
Sbjct: 410 TSCTYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALIDGLCKAGELEEARHLF 469

Query: 392 DEMKL-------------YNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGI 438
            +M++              +   D ++   +++ LC++  + +A KL   L  +     I
Sbjct: 470 YKMEIGKNPSLFLRLSQGADRVMDTASLQTMVERLCESGLILKAYKLLMQLADSGVVPDI 529

Query: 439 EIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLY 498
             +N LI+G CKA  ++ A++LF +L  KG  P  VTY  +I G  R  + E A   L  
Sbjct: 530 MTYNVLINGFCKAKNINGAFKLFRELQLKGHSPDSVTYGTLIDGFHRVDREEDAFRVLDQ 589

Query: 499 MEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHK 533
           M KNGC P+   +  LM    +  K S    L  K
Sbjct: 590 MVKNGCTPSSAVYKCLMTWSCRKGKLSVAFSLWLK 624



 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 102/340 (30%), Positives = 175/340 (51%)

Query: 195 SYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEM 254
           ++S++I +  K G+ +KA E F +MK  G  P V    +++H       +     ++ +M
Sbjct: 133 TFSVLIAAYAKSGMAEKAVESFGKMKDFGCKPDVFTYNSILHVMVQKEVFLLALAVYNQM 192

Query: 255 LDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRI 314
           L L   PN  TF ++++ LCK GK ++A  + + M Q+G+ P+   Y  ++ G C   R 
Sbjct: 193 LKLNYNPNRATFVILLNGLCKNGKTDDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRT 252

Query: 315 DTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTL 374
           D    +  +M   GC    ++ N L++G+CK+  ++EA +L +     G    +  Y++L
Sbjct: 253 DDVHRLLNTMKVSGCCPDSITCNALLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSL 312

Query: 375 LSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKF 434
           + GLF+A +    Q+   +M    +EPD+  Y ILI G C+   V  A+ + + +     
Sbjct: 313 IDGLFRAKRYDEVQEWCRKMFKAGIEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGL 372

Query: 435 EFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKAND 494
                 +N LI G C  G LD A  L  ++ +    PT  TY+I+I G+CR G L++A  
Sbjct: 373 SPDTYCYNALIKGFCDVGLLDKARSLQLEISKNDCFPTSCTYTILICGMCRNGLLDEARQ 432

Query: 495 FLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKM 534
               ME  GC+P+++TFN L+ G  +  +  +   L +KM
Sbjct: 433 IFNQMENLGCSPSIMTFNALIDGLCKAGELEEARHLFYKM 472



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 133/483 (27%), Positives = 220/483 (45%), Gaps = 74/483 (15%)

Query: 75  ISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIK 134
           I  ++ L   + + + YD V  + RK+   G+ PD +   ILI       RG C    + 
Sbjct: 306 IKGYSSLIDGLFRAKRYDEVQEWCRKMFKAGIEPDVVLYTILI-------RGFCEVGMVD 358

Query: 135 EATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIF 194
            A  +  +M   G+ PD   Y  LI GFC  G L  A  L  +          ISK + F
Sbjct: 359 YALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKARSLQLE----------ISKNDCF 408

Query: 195 ----SYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGL 250
               +Y+I+I  +C+ GL+D+A+++F +M+  G +P+++    LI G C AG  EE   L
Sbjct: 409 PTSCTYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALIDGLCKAGELEEARHL 468

Query: 251 FIEMLDLGPRPNLL--------------TFNVMIDCLCKGGKINEANGLLELMIQRGLNP 296
           F +M ++G  P+L               +   M++ LC+ G I +A  LL  +   G+ P
Sbjct: 469 FYKM-EIGKNPSLFLRLSQGADRVMDTASLQTMVERLCESGLILKAYKLLMQLADSGVVP 527

Query: 297 DRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLY 356
           D  TYN L++G+C    I+ A ++F  +  KG     V+Y  LI+G+ ++   E+A  + 
Sbjct: 528 DIMTYNVLINGFCKAKNINGAFKLFRELQLKGHSPDSVTYGTLIDGFHRVDREEDAFRVL 587

Query: 357 RQIISNGVRQTVITYNTLLSGL----------------------------------FQAG 382
            Q++ NG   +   Y  L++                                    F+ G
Sbjct: 588 DQMVKNGCTPSSAVYKCLMTWSCRKGKLSVAFSLWLKYLRSLPSQEDETLKLAEEHFEKG 647

Query: 383 QAGYAQKLFDEM--KLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEI 440
           +   A +   EM  KL N E  ++ Y I + GLC+    +EA+K+F +L+  + +     
Sbjct: 648 ELEKAVRCLLEMNFKLNNFE--IAPYTIWLIGLCQARRSEEALKIFLVLKECQMDVNPPS 705

Query: 441 FNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYME 500
              LI+GLCK G L+ A ++F    +KG +      + ++  L  + K++ A D L  M 
Sbjct: 706 CVMLINGLCKDGNLEMAVDIFLYTLEKGFMLMPRICNQLLRSLILQDKMKHALDLLNRMN 765

Query: 501 KNG 503
             G
Sbjct: 766 SAG 768



 Score =  161 bits (408), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 144/584 (24%), Positives = 238/584 (40%), Gaps = 97/584 (16%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
           N  LH   +  +  L  A Y    M  +  +P  ++F +L   + KN   D  +  + ++
Sbjct: 170 NSILHVMVQKEVFLLALAVY--NQMLKLNYNPNRATFVILLNGLCKNGKTDDALKMFDEM 227

Query: 102 VSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLING 161
              G+ P+ +   I+++       GLC   R  +   L   M   G  PD IT   L++G
Sbjct: 228 TQKGIPPNTMIYTIILS-------GLCQAKRTDDVHRLLNTMKVSGCCPDSITCNALLDG 280

Query: 162 FCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKG 221
           FC+ G +  A  L +      Y  G      I  YS +ID L +    D+ +E   +M  
Sbjct: 281 FCKLGQIDEAFALLQLFEKEGYVLG------IKGYSSLIDGLFRAKRYDEVQEWCRKMFK 334

Query: 222 RGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINE 281
            GI P VV+ T LI GFC  G  +    +  +M   G  P+   +N +I   C  G +++
Sbjct: 335 AGIEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDK 394

Query: 282 ANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILIN 341
           A  L   + +    P   TY  L+ G C  G +D AR+IF  M + GC  +++++N LI+
Sbjct: 395 ARSLQLEISKNDCFPTSCTYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALID 454

Query: 342 GYCKILNVEEAMSLY--------------------------------------------- 356
           G CK   +EEA  L+                                             
Sbjct: 455 GLCKAGELEEARHLFYKMEIGKNPSLFLRLSQGADRVMDTASLQTMVERLCESGLILKAY 514

Query: 357 ---RQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGL 413
               Q+  +GV   ++TYN L++G  +A     A KLF E++L    PD  TY  LIDG 
Sbjct: 515 KLLMQLADSGVVPDIMTYNVLINGFCKAKNINGAFKLFRELQLKGHSPDSVTYGTLIDGF 574

Query: 414 CKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHK----LP---- 465
            + +  ++A ++   +  N       ++ CL+   C+ G+L  A+ L+ K    LP    
Sbjct: 575 HRVDREEDAFRVLDQMVKNGCTPSSAVYKCLMTWSCRKGKLSVAFSLWLKYLRSLPSQED 634

Query: 466 ----------QKGLVPTVVT----------------YSIMIHGLCRKGKLEKANDFLLYM 499
                     +KG +   V                 Y+I + GLC+  + E+A    L +
Sbjct: 635 ETLKLAEEHFEKGELEKAVRCLLEMNFKLNNFEIAPYTIWLIGLCQARRSEEALKIFLVL 694

Query: 500 EKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVP 543
           ++     N  +   L++G  ++      V++     E    L+P
Sbjct: 695 KECQMDVNPPSCVMLINGLCKDGNLEMAVDIFLYTLEKGFMLMP 738



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 77/289 (26%), Positives = 140/289 (48%), Gaps = 2/289 (0%)

Query: 264 LTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLS 323
           +T N++ID L K    +    +LE +    +     T++ L+  Y   G  + A E F  
Sbjct: 97  VTHNLVIDMLAKDDGFDTYWKILEELKNSNIQIPPPTFSVLIAAYAKSGMAEKAVESFGK 156

Query: 324 MHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQ 383
           M   GCK  V +YN +++   +      A+++Y Q++         T+  LL+GL + G+
Sbjct: 157 MKDFGCKPDVFTYNSILHVMVQKEVFLLALAVYNQMLKLNYNPNRATFVILLNGLCKNGK 216

Query: 384 AGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNC 443
              A K+FDEM    + P+   Y I++ GLC+     +  +L + ++++         N 
Sbjct: 217 TDDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNA 276

Query: 444 LIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNG 503
           L+DG CK G++D A+ L     ++G V  +  YS +I GL R  + ++  ++   M K G
Sbjct: 277 LLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAG 336

Query: 504 CAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVV 552
             P+VV +  L+ GF +       + +L+ M   +R L PD   ++ ++
Sbjct: 337 IEPDVVLYTILIRGFCEVGMVDYALNMLNDMT--QRGLSPDTYCYNALI 383



 Score = 99.0 bits (245), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 61/245 (24%), Positives = 132/245 (53%), Gaps = 4/245 (1%)

Query: 331 HTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKL 390
            + V++N++I+   K    +    +  ++ ++ ++    T++ L++   ++G A  A + 
Sbjct: 94  RSWVTHNLVIDMLAKDDGFDTYWKILEELKNSNIQIPPPTFSVLIAAYAKSGMAEKAVES 153

Query: 391 FDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLF-HMLEMNKFEFGIEIFNCLIDGLC 449
           F +MK +  +PD+ TYN ++  + +      A+ ++  ML++N +      F  L++GLC
Sbjct: 154 FGKMKDFGCKPDVFTYNSILHVMVQKEVFLLALAVYNQMLKLN-YNPNRATFVILLNGLC 212

Query: 450 KAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVV 509
           K G+ D+A ++F ++ QKG+ P  + Y+I++ GLC+  + +  +  L  M+ +GC P+ +
Sbjct: 213 KNGKTDDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSI 272

Query: 510 TFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSK 569
           T N L+ GF +  +  +   LL ++ E E   V     +S ++D L + ++Y E     +
Sbjct: 273 TCNALLDGFCKLGQIDEAFALL-QLFEKE-GYVLGIKGYSSLIDGLFRAKRYDEVQEWCR 330

Query: 570 SSYRA 574
             ++A
Sbjct: 331 KMFKA 335


>gi|125596712|gb|EAZ36492.1| hypothetical protein OsJ_20823 [Oryza sativa Japonica Group]
          Length = 604

 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 131/462 (28%), Positives = 225/462 (48%), Gaps = 16/462 (3%)

Query: 77  SFNLLFGAVAKNRHYDAVISFYRKLVS-IGLLPDFLTLNILINCFGNKERGLCVENRIKE 135
           +FN +  A+A+ R    +   Y  +     + PD +T  IL+N       GLC   R+ +
Sbjct: 138 AFNSILAALARVRDVPGMARIYALMQGCASVRPDVVTYGILVN-------GLCKAGRVGD 190

Query: 136 ATWLFKNMIA--FGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNI 193
           A  +   M      +RPDV+T  T+++G C++G +  AL   ++ +S  +        N 
Sbjct: 191 ALRVLDGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEALAFVEQRMSSVHG----CPPNT 246

Query: 194 FSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIE 253
            +Y+ +ID+ C+ G +  A EL  +M+  G+   +V   T++ G C AG        F E
Sbjct: 247 VTYNCLIDAFCRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFRE 306

Query: 254 MLDLGP--RPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
              + P  + N +T++ ++  L     +  A  L    +  G +PD   Y +++ G    
Sbjct: 307 KRTVWPEGKGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQA 366

Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
           GR++ A  +  SM   G K    +YNILI G+C+   + EA  L +++   G+R  V TY
Sbjct: 367 GRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTY 426

Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
           NTLLSG  +AG      +L  +M     +P + T+  L+ G CK   + EA+++   ++ 
Sbjct: 427 NTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDE 486

Query: 432 NKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEK 491
           +       I+N LID LCK G +D A ELF ++ +K +   V T++ ++ GL  K   EK
Sbjct: 487 SGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGLRDKNMPEK 546

Query: 492 ANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHK 533
           A + +  M +  C P+ VT + LM       +T ++   + +
Sbjct: 547 AFELMDQMREERCFPDYVTVDVLMEWLPVIGETDRLKRFMQQ 588



 Score = 47.0 bits (110), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 23/89 (25%), Positives = 46/89 (51%), Gaps = 2/89 (2%)

Query: 471 PTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNG--CAPNVVTFNTLMHGFLQNNKTSKVV 528
           P VVTY I+++GLC+ G++  A   L  M +      P+VVT NT++ G  ++ +  + +
Sbjct: 170 PDVVTYGILVNGLCKAGRVGDALRVLDGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEAL 229

Query: 529 ELLHKMAEPERNLVPDDTTFSIVVDLLAK 557
             + +         P+  T++ ++D   +
Sbjct: 230 AFVEQRMSSVHGCPPNTVTYNCLIDAFCR 258



 Score = 40.0 bits (92), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 22/73 (30%), Positives = 37/73 (50%), Gaps = 3/73 (4%)

Query: 497 LYMEKNGCA---PNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
           +Y    GCA   P+VVT+  L++G  +  +    + +L  M+  + ++ PD  T + VVD
Sbjct: 158 IYALMQGCASVRPDVVTYGILVNGLCKAGRVGDALRVLDGMSRQDLDIRPDVVTLNTVVD 217

Query: 554 LLAKDEKYHECSA 566
            L K  +  E  A
Sbjct: 218 GLCKSGRVQEALA 230


>gi|218199706|gb|EEC82133.1| hypothetical protein OsI_26175 [Oryza sativa Indica Group]
          Length = 799

 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 132/456 (28%), Positives = 219/456 (48%), Gaps = 34/456 (7%)

Query: 125 RGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYE 184
           + LC   RIK+A  LF  M +    PDV+TYG +++G+C    L  A++L  +M +   E
Sbjct: 261 KALCTAGRIKDAHQLFDEMAS---PPDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLE 317

Query: 185 NGLISKTNIFS-----------------------------YSIIIDSLCKEGLVDKAKEL 215
              ++ T++ +                             ++ ++   C++G +  A+  
Sbjct: 318 LNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNW 377

Query: 216 FLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCK 275
           F EM+ RG+    V  T LI+G C AG  +E   +  EM D G   + +T+ V+ID  CK
Sbjct: 378 FDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCK 437

Query: 276 GGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVS 335
            GK+ EA  +   M+Q+ + P+  TY +L DG C  G +  A E+   M SKG +  + +
Sbjct: 438 VGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFT 497

Query: 336 YNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMK 395
           YN LING CK  N+E+AM     +   G++  V TY T++  L Q+ +   A  L  EM 
Sbjct: 498 YNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEML 557

Query: 396 LYNVEPDLSTYNILIDGLCKNNCVQEAVKLFH-MLEMNKFEFGIEIFNCLIDGLCKAGRL 454
              ++P + TYN+L++G C +  V+   +L   MLE N        +N L+   C    +
Sbjct: 558 DKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKN-IHPNTTTYNSLMKQYCIEKNM 616

Query: 455 DNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTL 514
            +  E++  +  + +VP   TY+I+I G C+   +++A  F   M + G      ++N L
Sbjct: 617 KSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNAL 676

Query: 515 MHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSI 550
           +    +  K ++   L  KM +      PD   F I
Sbjct: 677 IRLLNKKKKFTEARRLFEKMRKDRLTAEPDVYNFYI 712



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 113/382 (29%), Positives = 188/382 (49%), Gaps = 13/382 (3%)

Query: 93  AVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDV 152
           A  +++ ++   GL  D +T   LIN       GLC    +KEA  + + M   G+  D 
Sbjct: 373 AARNWFDEMQKRGLAADGVTYTALIN-------GLCRAGELKEAERVLQEMEDKGLDVDA 425

Query: 153 ITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKA 212
           +TY  LI+G+C+ G ++ A  +H KMV            N+ +Y+ + D LCK+G V  A
Sbjct: 426 VTYTVLIDGYCKVGKMTEAFLVHNKMVQKRV------TPNVVTYTALSDGLCKQGDVCAA 479

Query: 213 KELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDC 272
            EL  EM  +G+   +    +LI+G C AGN E+     I+M + G +P++ T+  +I  
Sbjct: 480 NELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGA 539

Query: 273 LCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHT 332
           LC+  +++ A+ LL+ M+ +G+ P   TYN LM+G+C+ GR++  + +   M  K     
Sbjct: 540 LCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPN 599

Query: 333 VVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFD 392
             +YN L+  YC   N++    +Y+ ++S  V     TYN L+ G  +A     A     
Sbjct: 600 TTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHS 659

Query: 393 EMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAG 452
           EM         S+YN LI  L K     EA +LF  +  ++     +++N  ID      
Sbjct: 660 EMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRKDRLTAEPDVYNFYIDLSFNED 719

Query: 453 RLDNAWELFHKLPQKGLVPTVV 474
            L++   L  +L +  LV ++ 
Sbjct: 720 NLESTLALCDELVEVTLVKSIA 741



 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 69/265 (26%), Positives = 109/265 (41%), Gaps = 31/265 (11%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
           NE LHE C  G + LN                 I ++N L   + K  + +  +     +
Sbjct: 480 NELLHEMCSKG-LELN-----------------IFTYNSLINGLCKAGNLEQAMRTMIDM 521

Query: 102 VSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLING 161
              GL PD  T   +I         LC    +  A  L + M+  G++P ++TY  L+NG
Sbjct: 522 DEAGLKPDVYTYTTIIG-------ALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNG 574

Query: 162 FCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKG 221
           FC +G +    RL + M+  +         N  +Y+ ++   C E  +    E++  M  
Sbjct: 575 FCMSGRVEGGKRLLEWMLEKNIH------PNTTTYNSLMKQYCIEKNMKSTTEIYKGMLS 628

Query: 222 RGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINE 281
           + + P       LI G C A N +E      EM++ G R    ++N +I  L K  K  E
Sbjct: 629 QEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTE 688

Query: 282 ANGLLELMIQRGLNPDRFTYNSLMD 306
           A  L E M +  L  +   YN  +D
Sbjct: 689 ARRLFEKMRKDRLTAEPDVYNFYID 713


>gi|115475728|ref|NP_001061460.1| Os08g0290000 [Oryza sativa Japonica Group]
 gi|38175588|dbj|BAD01297.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|38175668|dbj|BAD01373.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|113623429|dbj|BAF23374.1| Os08g0290000 [Oryza sativa Japonica Group]
 gi|125602875|gb|EAZ42200.1| hypothetical protein OsJ_26764 [Oryza sativa Japonica Group]
          Length = 806

 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 137/565 (24%), Positives = 260/565 (46%), Gaps = 53/565 (9%)

Query: 24  LFKSPRQIAAVSSPETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFG 83
           +F   R+   V+  E      +   CK+G ++         +   +QP+  + ++N+L  
Sbjct: 207 VFDEMRESRNVALNEYSYTAMIKALCKAGKVDAGFEMLAELWRAGLQPT--VVTYNVLMD 264

Query: 84  AVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNM 143
           A+ K+   +       ++   G+ P  +T  ILIN       GL    R  E   + + M
Sbjct: 265 ALCKSGRVEEAFRLKGRMEQGGMTPSVVTFGILIN-------GLARGERFGEVGIVLQEM 317

Query: 144 IAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSL 203
              GV P+ + Y  LI   CR G+ S ALRL  +MV          K    +Y++I  +L
Sbjct: 318 EQLGVSPNEVIYNELIGWHCRKGHCSQALRLFDEMVLKKM------KPTAVTYNLIAKAL 371

Query: 204 CKEGLVDKAKELFL------------------------------------EMKGRGINPA 227
           CKEG +++A+ +                                      EM  RG+ P 
Sbjct: 372 CKEGEMERAERILEDMLSIGMTVHCGLFNTVVAWLLQRTRRLESVVSITNEMVTRGMRPN 431

Query: 228 VVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLE 287
             + T  +   C  G  +E  G++ + L+ G   NL T N +I  LC+G  + EA  +++
Sbjct: 432 DPLMTACMRELCKGGKHQEAVGIWFKTLNKGLGVNLATSNALIHGLCEGKYMKEATKVIQ 491

Query: 288 LMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKIL 347
            M+ +G+  D  TYN ++ G C   +++ A ++   M  +G K  + ++N L++ YC + 
Sbjct: 492 TMLNKGIELDSITYNIMIRGCCKDSKMEEAIKLHGDMTRRGFKPDLFTFNTLLHAYCNLG 551

Query: 348 NVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYN 407
            +EE   L  Q+ + G++  +++Y T++ G  +A     A++   E+    ++P++  YN
Sbjct: 552 KMEETFHLLDQMKTEGLQPDIVSYGTIIDGHCKAKDIRKAKEYLTELMDRGLKPNVFIYN 611

Query: 408 ILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQK 467
            LI G  +N  +  A+     ++ N  +     +  L+  +C AG ++ A  +F +  + 
Sbjct: 612 ALIGGYGRNGDISGAIDAVETMKSNGIQPTNVTYGSLMYWMCHAGLVEEAKTIFSQAREN 671

Query: 468 GLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKV 527
            +   V+ Y+IMI G C+ GK+ +A  +   M   G +PN +T+ TLM+ + ++  + + 
Sbjct: 672 NVDLGVIGYTIMIQGYCKLGKMVEAVAYFEEMRSRGISPNKLTYTTLMYAYSKSGNSEEA 731

Query: 528 VELLHKMAEPERNLVPDDTTFSIVV 552
            +L  +M      ++PD+ T+  ++
Sbjct: 732 SKLFDEMVGS--GVIPDNITYGTLI 754



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 136/561 (24%), Positives = 251/561 (44%), Gaps = 46/561 (8%)

Query: 21  LSSLFKSPRQIAAVSSPETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNL 80
           L+ L+++  Q   V+      N  +   CKSG   + EA    G M     +P + +F +
Sbjct: 244 LAELWRAGLQPTVVT-----YNVLMDALCKSG--RVEEAFRLKGRMEQGGMTPSVVTFGI 296

Query: 81  LFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLF 140
           L   +A+   +  V    +++  +G+ P+ +  N LI          C +    +A  LF
Sbjct: 297 LINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNELIGWH-------CRKGHCSQALRLF 349

Query: 141 KNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVS-------GDYEN---GLISK 190
             M+   ++P  +TY  +    C+ G +  A R+ + M+S       G +      L+ +
Sbjct: 350 DEMVLKKMKPTAVTYNLIAKALCKEGEMERAERILEDMLSIGMTVHCGLFNTVVAWLLQR 409

Query: 191 TNIFSYSIIIDS--------------------LCKEGLVDKAKELFLEMKGRGINPAVVV 230
           T      + I +                    LCK G   +A  ++ +   +G+   +  
Sbjct: 410 TRRLESVVSITNEMVTRGMRPNDPLMTACMRELCKGGKHQEAVGIWFKTLNKGLGVNLAT 469

Query: 231 CTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMI 290
              LIHG C     +E   +   ML+ G   + +T+N+MI   CK  K+ EA  L   M 
Sbjct: 470 SNALIHGLCEGKYMKEATKVIQTMLNKGIELDSITYNIMIRGCCKDSKMEEAIKLHGDMT 529

Query: 291 QRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVE 350
           +RG  PD FT+N+L+  YC +G+++    +   M ++G +  +VSY  +I+G+CK  ++ 
Sbjct: 530 RRGFKPDLFTFNTLLHAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTIIDGHCKAKDIR 589

Query: 351 EAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILI 410
           +A     +++  G++  V  YN L+ G  + G    A    + MK   ++P   TY  L+
Sbjct: 590 KAKEYLTELMDRGLKPNVFIYNALIGGYGRNGDISGAIDAVETMKSNGIQPTNVTYGSLM 649

Query: 411 DGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLV 470
             +C    V+EA  +F     N  + G+  +  +I G CK G++  A   F ++  +G+ 
Sbjct: 650 YWMCHAGLVEEAKTIFSQARENNVDLGVIGYTIMIQGYCKLGKMVEAVAYFEEMRSRGIS 709

Query: 471 PTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVEL 530
           P  +TY+ +++   + G  E+A+     M  +G  P+ +T+ TL+    + N   K  ++
Sbjct: 710 PNKLTYTTLMYAYSKSGNSEEASKLFDEMVGSGVIPDNITYGTLIARCSEVNSLDK--DI 767

Query: 531 LHKMAEPERNLVPDDTTFSIV 551
            H        L  DD  ++I+
Sbjct: 768 GHTAELSSGALTKDDRMYNIL 788



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 116/415 (27%), Positives = 194/415 (46%), Gaps = 8/415 (1%)

Query: 140 FKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSII 199
           F+ + + G  P + T    +    R G L  A  +  +M     E+  ++  N +SY+ +
Sbjct: 173 FRVLSSRGAPPSIKTCNAFLEALVRAGQLDAAREVFDEM----RESRNVA-LNEYSYTAM 227

Query: 200 IDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGP 259
           I +LCK G VD   E+  E+   G+ P VV    L+   C +G  EE   L   M   G 
Sbjct: 228 IKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVEEAFRLKGRMEQGGM 287

Query: 260 RPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTARE 319
            P+++TF ++I+ L +G +  E   +L+ M Q G++P+   YN L+  +C  G    A  
Sbjct: 288 TPSVVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNELIGWHCRKGHCSQALR 347

Query: 320 IFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLF 379
           +F  M  K  K T V+YN++    CK   +E A  +   ++S G+      +NT+++ L 
Sbjct: 348 LFDEMVLKKMKPTAVTYNLIAKALCKEGEMERAERILEDMLSIGMTVHCGLFNTVVAWLL 407

Query: 380 QAGQA-GYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGI 438
           Q  +       + +EM    + P+       +  LCK    QEAV ++           +
Sbjct: 408 QRTRRLESVVSITNEMVTRGMRPNDPLMTACMRELCKGGKHQEAVGIWFKTLNKGLGVNL 467

Query: 439 EIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLY 498
              N LI GLC+   +  A ++   +  KG+    +TY+IMI G C+  K+E+A      
Sbjct: 468 ATSNALIHGLCEGKYMKEATKVIQTMLNKGIELDSITYNIMIRGCCKDSKMEEAIKLHGD 527

Query: 499 MEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
           M + G  P++ TFNTL+H +    K  +   LL +M      L PD  ++  ++D
Sbjct: 528 MTRRGFKPDLFTFNTLLHAYCNLGKMEETFHLLDQM--KTEGLQPDIVSYGTIID 580



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 92/361 (25%), Positives = 164/361 (45%), Gaps = 4/361 (1%)

Query: 206 EGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLD-LGPRPNLL 264
           +G + +A + F  +  RG  P++  C   +     AG  +    +F EM +      N  
Sbjct: 163 QGSLCRAADAFRVLSSRGAPPSIKTCNAFLEALVRAGQLDAAREVFDEMRESRNVALNEY 222

Query: 265 TFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSM 324
           ++  MI  LCK GK++    +L  + + GL P   TYN LMD  C  GR++ A  +   M
Sbjct: 223 SYTAMIKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVEEAFRLKGRM 282

Query: 325 HSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQA 384
              G   +VV++ ILING  +     E   + +++   GV    + YN L+    + G  
Sbjct: 283 EQGGMTPSVVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNELIGWHCRKGHC 342

Query: 385 GYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCL 444
             A +LFDEM L  ++P   TYN++   LCK   ++ A ++   +          +FN +
Sbjct: 343 SQALRLFDEMVLKKMKPTAVTYNLIAKALCKEGEMERAERILEDMLSIGMTVHCGLFNTV 402

Query: 445 IDGLC-KAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNG 503
           +  L  +  RL++   + +++  +G+ P     +  +  LC+ GK ++A          G
Sbjct: 403 VAWLLQRTRRLESVVSITNEMVTRGMRPNDPLMTACMRELCKGGKHQEAVGIWFKTLNKG 462

Query: 504 CAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
              N+ T N L+HG  +     +  +++  M    + +  D  T++I++    KD K  E
Sbjct: 463 LGVNLATSNALIHGLCEGKYMKEATKVIQTML--NKGIELDSITYNIMIRGCCKDSKMEE 520

Query: 564 C 564
            
Sbjct: 521 A 521



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 80/293 (27%), Positives = 137/293 (46%), Gaps = 4/293 (1%)

Query: 277 GKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMH-SKGCKHTVVS 335
           G +  A     ++  RG  P   T N+ ++     G++D ARE+F  M  S+       S
Sbjct: 164 GSLCRAADAFRVLSSRGAPPSIKTCNAFLEALVRAGQLDAAREVFDEMRESRNVALNEYS 223

Query: 336 YNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMK 395
           Y  +I   CK   V+    +  ++   G++ TV+TYN L+  L ++G+   A +L   M+
Sbjct: 224 YTAMIKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVEEAFRLKGRME 283

Query: 396 LYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLD 455
              + P + T+ ILI+GL +     E   +   +E         I+N LI   C+ G   
Sbjct: 284 QGGMTPSVVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNELIGWHCRKGHCS 343

Query: 456 NAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLM 515
            A  LF ++  K + PT VTY+++   LC++G++E+A   L  M   G   +   FNT++
Sbjct: 344 QALRLFDEMVLKKMKPTAVTYNLIAKALCKEGEMERAERILEDMLSIGMTVHCGLFNTVV 403

Query: 516 HGFLQNNKT-SKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAV 567
              LQ  +    VV + ++M    R + P+D   +  +  L K  K+ E   +
Sbjct: 404 AWLLQRTRRLESVVSITNEMV--TRGMRPNDPLMTACMRELCKGGKHQEAVGI 454



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 77/302 (25%), Positives = 145/302 (48%), Gaps = 13/302 (4%)

Query: 77  SFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEA 136
           ++N++     K+   +  I  +  +   G  PD  T N L++ +       C   +++E 
Sbjct: 504 TYNIMIRGCCKDSKMEEAIKLHGDMTRRGFKPDLFTFNTLLHAY-------CNLGKMEET 556

Query: 137 TWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSY 196
             L   M   G++PD+++YGT+I+G C+  ++    R  K+ ++   + GL  K N+F Y
Sbjct: 557 FHLLDQMKTEGLQPDIVSYGTIIDGHCKAKDI----RKAKEYLTELMDRGL--KPNVFIY 610

Query: 197 SIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLD 256
           + +I    + G +  A +    MK  GI P  V   +L++  C AG  EE   +F +  +
Sbjct: 611 NALIGGYGRNGDISGAIDAVETMKSNGIQPTNVTYGSLMYWMCHAGLVEEAKTIFSQARE 670

Query: 257 LGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDT 316
                 ++ + +MI   CK GK+ EA    E M  RG++P++ TY +LM  Y   G  + 
Sbjct: 671 NNVDLGVIGYTIMIQGYCKLGKMVEAVAYFEEMRSRGISPNKLTYTTLMYAYSKSGNSEE 730

Query: 317 AREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLS 376
           A ++F  M   G     ++Y  LI    ++ ++++ +    ++ S  + +    YN L +
Sbjct: 731 ASKLFDEMVGSGVIPDNITYGTLIARCSEVNSLDKDIGHTAELSSGALTKDDRMYNILSN 790

Query: 377 GL 378
           G+
Sbjct: 791 GI 792


>gi|52076779|dbj|BAD45723.1| putative pentatricopeptide repeat-containing protein [Oryza sativa
           Japonica Group]
          Length = 629

 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 131/462 (28%), Positives = 225/462 (48%), Gaps = 16/462 (3%)

Query: 77  SFNLLFGAVAKNRHYDAVISFYRKLVS-IGLLPDFLTLNILINCFGNKERGLCVENRIKE 135
           +FN +  A+A+ R    +   Y  +     + PD +T  IL+N       GLC   R+ +
Sbjct: 138 AFNSILAALARVRDVPGMARIYALMQGCASVRPDVVTYGILVN-------GLCKAGRVGD 190

Query: 136 ATWLFKNMIA--FGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNI 193
           A  +   M      +RPDV+T  T+++G C++G +  AL   ++ +S  +        N 
Sbjct: 191 ALRVLDGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEALAFVEQRMSSVHG----CPPNT 246

Query: 194 FSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIE 253
            +Y+ +ID+ C+ G +  A EL  +M+  G+   +V   T++ G C AG        F E
Sbjct: 247 VTYNCLIDAFCRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFRE 306

Query: 254 MLDLGP--RPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
              + P  + N +T++ ++  L     +  A  L    +  G +PD   Y +++ G    
Sbjct: 307 KRTVWPEGKGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQA 366

Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
           GR++ A  +  SM   G K    +YNILI G+C+   + EA  L +++   G+R  V TY
Sbjct: 367 GRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTY 426

Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
           NTLLSG  +AG      +L  +M     +P + T+  L+ G CK   + EA+++   ++ 
Sbjct: 427 NTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDE 486

Query: 432 NKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEK 491
           +       I+N LID LCK G +D A ELF ++ +K +   V T++ ++ GL  K   EK
Sbjct: 487 SGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGLRDKNMPEK 546

Query: 492 ANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHK 533
           A + +  M +  C P+ VT + LM       +T ++   + +
Sbjct: 547 AFELMDQMREERCFPDYVTVDVLMEWLPVIGETDRLKRFMQQ 588



 Score = 46.6 bits (109), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 23/89 (25%), Positives = 46/89 (51%), Gaps = 2/89 (2%)

Query: 471 PTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNG--CAPNVVTFNTLMHGFLQNNKTSKVV 528
           P VVTY I+++GLC+ G++  A   L  M +      P+VVT NT++ G  ++ +  + +
Sbjct: 170 PDVVTYGILVNGLCKAGRVGDALRVLDGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEAL 229

Query: 529 ELLHKMAEPERNLVPDDTTFSIVVDLLAK 557
             + +         P+  T++ ++D   +
Sbjct: 230 AFVEQRMSSVHGCPPNTVTYNCLIDAFCR 258



 Score = 40.0 bits (92), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 22/73 (30%), Positives = 37/73 (50%), Gaps = 3/73 (4%)

Query: 497 LYMEKNGCA---PNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
           +Y    GCA   P+VVT+  L++G  +  +    + +L  M+  + ++ PD  T + VVD
Sbjct: 158 IYALMQGCASVRPDVVTYGILVNGLCKAGRVGDALRVLDGMSRQDLDIRPDVVTLNTVVD 217

Query: 554 LLAKDEKYHECSA 566
            L K  +  E  A
Sbjct: 218 GLCKSGRVQEALA 230


>gi|359472741|ref|XP_003631192.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g19890-like [Vitis vinifera]
          Length = 708

 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 142/507 (28%), Positives = 234/507 (46%), Gaps = 20/507 (3%)

Query: 37  PETQ-LNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVI 95
           P TQ LN  L      G++ + E    F  M     SP   SF L+  A           
Sbjct: 187 PSTQTLNCVLDVAVGMGLVEIAEN--MFVEMCQRGVSPDCVSFKLMVVACCNMGRVLEAE 244

Query: 96  SFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITY 155
            +   +V  G + D  T  ++I+ F       C +  +      F  M+  G+ P+VI +
Sbjct: 245 RWLNAMVERGFIVDNATCTLIIDAF-------CQKGYVNRVVGYFWKMVEMGLAPNVINF 297

Query: 156 GTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKEL 215
             LING C+ G++  A  L ++MV   +      K N+++++ +ID LCK+G  +KA  L
Sbjct: 298 TALINGLCKQGSIKQAFELLEEMVRRGW------KPNVYTHTTLIDGLCKKGWTEKAFRL 351

Query: 216 FLEM-KGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLC 274
           FL++ +  G  P V   T +I+G+C          L   M + G  PN  T+  +ID  C
Sbjct: 352 FLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHC 411

Query: 275 KGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVV 334
           K G    A  L++LM + G +P+ +TYN+++DG C  G +D A  +   +   G +   V
Sbjct: 412 KVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGV 471

Query: 335 SYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEM 394
           +Y IL++ +C+  +   ++  + +++  G    + +Y TL+S   +  Q   +++LF+E 
Sbjct: 472 TYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISTFCRQKQMKESERLFEEA 531

Query: 395 KLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRL 454
               + P   TY  +I G C+      AVKLF  +  +        +  LI GLCK  +L
Sbjct: 532 VSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGALISGLCKESKL 591

Query: 455 DNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTL 514
           D+A  L+  +  KGL P  VT   + +  C+K     A + L  +EK      + T NTL
Sbjct: 592 DDARNLYDAMMDKGLSPCEVTRLTLAYEYCKKDDSSTAINVLDRLEKRQW---IRTVNTL 648

Query: 515 MHGFLQNNKTSKVVELLHKMAEPERNL 541
           +       K        HK+ + E N+
Sbjct: 649 VRKLCSEGKLDMAALFFHKLLDKEPNV 675



 Score =  202 bits (513), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 142/462 (30%), Positives = 225/462 (48%), Gaps = 17/462 (3%)

Query: 76  SSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKE 135
           ++  L+  A  +  + + V+ ++ K+V +GL P+ +    LIN       GLC +  IK+
Sbjct: 260 ATCTLIIDAFCQKGYVNRVVGYFWKMVEMGLAPNVINFTALIN-------GLCKQGSIKQ 312

Query: 136 ATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFS 195
           A  L + M+  G +P+V T+ TLI+G C+ G    A RL  K+V  D       K N+ +
Sbjct: 313 AFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDG-----YKPNVHT 367

Query: 196 YSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEML 255
           Y+ +I+  CKE  +++A+ L   M+ +G+ P     TTLI G C  GN+     L   M 
Sbjct: 368 YTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMG 427

Query: 256 DLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRID 315
             G  PN+ T+N +ID LCK G ++EA  LL  +   GL  D  TY  LM  +C     +
Sbjct: 428 KEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTN 487

Query: 316 TAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLL 375
            +   F  M   G    + SY  LI+ +C+   ++E+  L+ + +S G+  T  TY +++
Sbjct: 488 RSLVFFNKMLKVGFTPDIHSYTTLISTFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMI 547

Query: 376 SGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFE 435
            G  + G    A KLF  M  +   PD  TY  LI GLCK + + +A  L+  + M+K  
Sbjct: 548 CGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGALISGLCKESKLDDARNLYDAM-MDKGL 606

Query: 436 FGIEIFN-CLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKAND 494
              E+    L    CK      A  +  +L ++  + TV T   ++  LC +GKL+ A  
Sbjct: 607 SPCEVTRLTLAYEYCKKDDSSTAINVLDRLEKRQWIRTVNT---LVRKLCSEGKLDMAAL 663

Query: 495 FLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAE 536
           F   +       N VT    M+   ++NK   V EL  ++ E
Sbjct: 664 FFHKLLDKEPNVNRVTLLGFMNKCYESNKYGLVSELSERICE 705



 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 118/430 (27%), Positives = 209/430 (48%), Gaps = 9/430 (2%)

Query: 132 RIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKT 191
           ++KEA  +   M   G+ P   T   +++     G + +A  +  +M     + G+    
Sbjct: 169 KLKEAVNMVVEMQNQGLVPSTQTLNCVLDVAVGMGLVEIAENMFVEMC----QRGV--SP 222

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
           +  S+ +++ + C  G V +A+     M  RG       CT +I  FC  G    V G F
Sbjct: 223 DCVSFKLMVVACCNMGRVLEAERWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVVGYF 282

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
            +M+++G  PN++ F  +I+ LCK G I +A  LLE M++RG  P+ +T+ +L+DG C  
Sbjct: 283 WKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKK 342

Query: 312 GRIDTAREIFLSM-HSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVIT 370
           G  + A  +FL +  S G K  V +Y  +INGYCK   +  A  L  ++   G+     T
Sbjct: 343 GWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNT 402

Query: 371 YNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLE 430
           Y TL+ G  + G    A +L D M      P++ TYN +IDGLCK   + EA +L + + 
Sbjct: 403 YTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVS 462

Query: 431 MNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLE 490
           ++  +     +  L+   C+    + +   F+K+ + G  P + +Y+ +I   CR+ +++
Sbjct: 463 VHGLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISTFCRQKQMK 522

Query: 491 KANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSI 550
           ++          G  P   T+ +++ G+ +   TS  V+L  +M+       PD  T+  
Sbjct: 523 ESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRMS--NHGCAPDSITYGA 580

Query: 551 VVDLLAKDEK 560
           ++  L K+ K
Sbjct: 581 LISGLCKESK 590



 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 94/366 (25%), Positives = 180/366 (49%), Gaps = 3/366 (0%)

Query: 199 IIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLG 258
           ++ +  + G + +A  + +EM+ +G+ P+      ++      G  E    +F+EM   G
Sbjct: 160 MVMNFAENGKLKEAVNMVVEMQNQGLVPSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRG 219

Query: 259 PRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAR 318
             P+ ++F +M+   C  G++ EA   L  M++RG   D  T   ++D +C  G ++   
Sbjct: 220 VSPDCVSFKLMVVACCNMGRVLEAERWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVV 279

Query: 319 EIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGL 378
             F  M   G    V+++  LING CK  ++++A  L  +++  G +  V T+ TL+ GL
Sbjct: 280 GYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGL 339

Query: 379 FQAGQAGYAQKLFDEM-KLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFG 437
            + G    A +LF ++ +    +P++ TY  +I+G CK + +  A  L   ++       
Sbjct: 340 CKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPN 399

Query: 438 IEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLL 497
              +  LIDG CK G    A+EL   + ++G  P + TY+ +I GLC+KG L++A   L 
Sbjct: 400 TNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLN 459

Query: 498 YMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAK 557
            +  +G   + VT+  LM    +   T++ +   +KM +      PD  +++ ++    +
Sbjct: 460 KVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKV--GFTPDIHSYTTLISTFCR 517

Query: 558 DEKYHE 563
            ++  E
Sbjct: 518 QKQMKE 523



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 85/334 (25%), Positives = 169/334 (50%), Gaps = 3/334 (0%)

Query: 222 RGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINE 281
           + +  A  V   ++  F   G  +E   + +EM + G  P+  T N ++D     G +  
Sbjct: 148 KNLERANEVMQCMVMNFAENGKLKEAVNMVVEMQNQGLVPSTQTLNCVLDVAVGMGLVEI 207

Query: 282 ANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILIN 341
           A  +   M QRG++PD  ++  ++   C +GR+  A     +M  +G      +  ++I+
Sbjct: 208 AENMFVEMCQRGVSPDCVSFKLMVVACCNMGRVLEAERWLNAMVERGFIVDNATCTLIID 267

Query: 342 GYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEP 401
            +C+   V   +  + +++  G+   VI +  L++GL + G    A +L +EM     +P
Sbjct: 268 AFCQKGYVNRVVGYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKP 327

Query: 402 DLSTYNILIDGLCKNNCVQEAVKLF-HMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWEL 460
           ++ T+  LIDGLCK    ++A +LF  ++  + ++  +  +  +I+G CK  +L+ A  L
Sbjct: 328 NVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEML 387

Query: 461 FHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQ 520
             ++ ++GLVP   TY+ +I G C+ G   +A + +  M K G +PN+ T+N ++ G  +
Sbjct: 388 LSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCK 447

Query: 521 NNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDL 554
                +   LL+K++     L  D  T++I++ +
Sbjct: 448 KGSLDEAYRLLNKVS--VHGLQADGVTYTILMSV 479



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 60/253 (23%), Positives = 97/253 (38%), Gaps = 53/253 (20%)

Query: 55  NLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLN 114
           + N +  FF  M  +  +P I S+  L     + +        + + VS+GL+P   T  
Sbjct: 485 DTNRSLVFFNKMLKVGFTPDIHSYTTLISTFCRQKQMKESERLFEEAVSLGLIPTKKTYT 544

Query: 115 ILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRL 174
            +I C      G C       A  LF+ M   G  PD ITYG LI+G C+          
Sbjct: 545 SMI-C------GYCRYGNTSLAVKLFQRMSNHGCAPDSITYGALISGLCK---------- 587

Query: 175 HKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTL 234
                                          E  +D A+ L+  M  +G++P  V   TL
Sbjct: 588 -------------------------------ESKLDDARNLYDAMMDKGLSPCEVTRLTL 616

Query: 235 IHGFCCAGNWEEVNGLFIEMLD-LGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRG 293
            + +C     ++ +   I +LD L  R  + T N ++  LC  GK++ A      ++ + 
Sbjct: 617 AYEYC----KKDDSSTAINVLDRLEKRQWIRTVNTLVRKLCSEGKLDMAALFFHKLLDKE 672

Query: 294 LNPDRFTYNSLMD 306
            N +R T    M+
Sbjct: 673 PNVNRVTLLGFMN 685


>gi|302775071|ref|XP_002970952.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
 gi|300161663|gb|EFJ28278.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
          Length = 698

 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 141/474 (29%), Positives = 228/474 (48%), Gaps = 29/474 (6%)

Query: 112 TLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVA 171
           T N L++ F   +R        +EA  L KN +A   RPDV T+  LI G+C       A
Sbjct: 121 TGNALLDVFARTKRH-------REAGNLLKNELATIFRPDVETWNVLITGYCLAREPEEA 173

Query: 172 LRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVC 231
             + ++M     E       ++ ++++++  LCK G V  A + F E   R +  +    
Sbjct: 174 FAVIREM-----EEDFGVAPSLKTHNLVLHGLCKSGKVLAAMDHF-EAVRRSMPVSAATF 227

Query: 232 TTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQ 291
           + LI+G   AG   + + L  E    G   ++ T+  +++ L K  KI EA  L+E +  
Sbjct: 228 SILINGLVKAGMMIQAHSLAQETTTNGCTIDIHTYTAIVNWLAKNKKIQEAVALMEKITA 287

Query: 292 RGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEE 351
            G  P   TYN+L++G C +GR++ A ++   +   GC   VV+Y  LI+G  K     E
Sbjct: 288 NGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFE 347

Query: 352 AMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILID 411
           A  L++++ S G+    + Y  L+ GL Q G+   A  ++  M  +   PD+ T + +ID
Sbjct: 348 AYKLFKEMASRGLALDTVCYTALIRGLLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMID 407

Query: 412 GLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVP 471
           GL K   +  AV++F  +E         +++ LI GLCKA ++D A E+  ++ +    P
Sbjct: 408 GLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTP 467

Query: 472 TVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELL 531
             +TY+I+I GLC+ G +E A  F   M + GC P+V T+N L+ G  +   T     +L
Sbjct: 468 DTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGLCKAGNTDAACGVL 527

Query: 532 HKMAEPERNLVPDDTTFSIVVDLLAKDEK-------YHEC--SAVSKSSYRACL 576
             M+            +S +VD L K  K       +HE   S V+ S  R  L
Sbjct: 528 DDMSSSR-------FVYSSLVDGLCKSGKLEGGCMLFHEMERSGVANSQTRTRL 574



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 131/482 (27%), Positives = 235/482 (48%), Gaps = 24/482 (4%)

Query: 72  SPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVEN 131
           +P + + NL+   + K+    A +  + + V   +     T +ILIN       GL    
Sbjct: 187 APSLKTHNLVLHGLCKSGKVLAAMDHF-EAVRRSMPVSAATFSILIN-------GLVKAG 238

Query: 132 RIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKT 191
            + +A  L +     G   D+ TY  ++N   +   +  A+ L +K+ +    NG     
Sbjct: 239 MMIQAHSLAQETTTNGCTIDIHTYTAIVNWLAKNKKIQEAVALMEKITA----NGCTP-- 292

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
            I +Y+ +++ LCK G +++A +L  ++   G  P VV  T+LI G        E   LF
Sbjct: 293 TIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLF 352

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
            EM   G   + + +  +I  L + GKI +A+ + + M   G  PD  T ++++DG    
Sbjct: 353 KEMASRGLALDTVCYTALIRGLLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKA 412

Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
           GRI  A  IF SM ++G     V Y+ LI+G CK   ++ A+ +  Q+         ITY
Sbjct: 413 GRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITY 472

Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
           N L+ GL ++G    A+  FDEM     +PD+ TYNILI GLCK      A  +   +  
Sbjct: 473 NILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGLCKAGNTDAACGVLDDMSS 532

Query: 432 NKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEK 491
           ++F     +++ L+DGLCK+G+L+    LFH++ + G+  +     ++ H LC+  ++++
Sbjct: 533 SRF-----VYSSLVDGLCKSGKLEGGCMLFHEMERSGVANSQTRTRLIFH-LCKANRVDE 586

Query: 492 ANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIV 551
           A      + K G  P+   +N+++   +++ K ++   +  +M    R   PD  T++ +
Sbjct: 587 AVSLFNAIRKEG-MPHPYAYNSIISALIKSGKVNEGQAVYQEMT---RWWKPDRVTYNAL 642

Query: 552 VD 553
           ++
Sbjct: 643 LN 644



 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 118/406 (29%), Positives = 194/406 (47%), Gaps = 44/406 (10%)

Query: 55  NLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLN 114
            + EA      +T    +P I+++N L   + K    +  I   RK+V  G  PD +T  
Sbjct: 274 KIQEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYT 333

Query: 115 ILINCFGNKER----------------------------GLCVENRIKEATWLFKNMIAF 146
            LI+  G ++R                            GL    +I +A+ ++K M + 
Sbjct: 334 SLIDGLGKEKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQTGKIPQASSVYKTMTSH 393

Query: 147 GVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKE 206
           G  PDV+T  T+I+G  + G +  A+R+ K M +     GL    N   YS +I  LCK 
Sbjct: 394 GCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEA----RGL--APNEVVYSALIHGLCKA 447

Query: 207 GLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTF 266
             +D A E+  +MK     P  +    LI G C +G+ E     F EML+ G +P++ T+
Sbjct: 448 RKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTY 507

Query: 267 NVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHS 326
           N++I  LCK G  + A G+L+ M     +  RF Y+SL+DG C  G+++    +F  M  
Sbjct: 508 NILISGLCKAGNTDAACGVLDDM-----SSSRFVYSSLVDGLCKSGKLEGGCMLFHEMER 562

Query: 327 KGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGY 386
            G  ++     ++ +  CK   V+EA+SL+  I   G+      YN+++S L ++G+   
Sbjct: 563 SGVANSQTRTRLIFH-LCKANRVDEAVSLFNAIRKEGMPHPY-AYNSIISALIKSGKVNE 620

Query: 387 AQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMN 432
            Q ++ EM  +  +PD  TYN L++G+   N +  A   ++ LEM 
Sbjct: 621 GQAVYQEMTRW-WKPDRVTYNALLNGMIGANRMDRA--HYYYLEMT 663



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 83/273 (30%), Positives = 121/273 (44%), Gaps = 21/273 (7%)

Query: 56  LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNI 115
           +  A   F  M     +P    ++ L   + K R  D  +    ++      PD +T NI
Sbjct: 415 IGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNI 474

Query: 116 LINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLH 175
           LI+       GLC    ++ A   F  M+  G +PDV TY  LI+G C+ GN   A  + 
Sbjct: 475 LID-------GLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGLCKAGNTDAACGVL 527

Query: 176 KKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLI 235
             M S             F YS ++D LCK G ++    LF EM+  G+  +    T LI
Sbjct: 528 DDMSSSR-----------FVYSSLVDGLCKSGKLEGGCMLFHEMERSGVANSQTR-TRLI 575

Query: 236 HGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLN 295
              C A   +E   LF  +   G  P+   +N +I  L K GK+NE   + + M  R   
Sbjct: 576 FHLCKANRVDEAVSLFNAIRKEG-MPHPYAYNSIISALIKSGKVNEGQAVYQEMT-RWWK 633

Query: 296 PDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKG 328
           PDR TYN+L++G     R+D A   +L M  +G
Sbjct: 634 PDRVTYNALLNGMIGANRMDRAHYYYLEMTGRG 666



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 50/221 (22%), Positives = 90/221 (40%), Gaps = 33/221 (14%)

Query: 33  AVSSPET-QLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHY 91
           A  +P+T   N  +   CKSG  ++  AR FF  M      P + ++N+L   + K  + 
Sbjct: 463 AFCTPDTITYNILIDGLCKSG--DVEAARAFFDEMLEAGCKPDVYTYNILISGLCKAGNT 520

Query: 92  DAVISFYRKLVSIGLLPDFLTLNILIN--------CFGNKERG--------------LCV 129
           DA       + S   +   L   +  +         F   ER               LC 
Sbjct: 521 DAACGVLDDMSSSRFVYSSLVDGLCKSGKLEGGCMLFHEMERSGVANSQTRTRLIFHLCK 580

Query: 130 ENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLIS 189
            NR+ EA  LF  +   G+ P    Y ++I+   ++G ++    ++++M           
Sbjct: 581 ANRVDEAVSLFNAIRKEGM-PHPYAYNSIISALIKSGKVNEGQAVYQEMTR-------WW 632

Query: 190 KTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVV 230
           K +  +Y+ +++ +     +D+A   +LEM GRG  P V +
Sbjct: 633 KPDRVTYNALLNGMIGANRMDRAHYYYLEMTGRGYVPPVSI 673


>gi|125569916|gb|EAZ11431.1| hypothetical protein OsJ_01299 [Oryza sativa Japonica Group]
          Length = 563

 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 132/445 (29%), Positives = 212/445 (47%), Gaps = 14/445 (3%)

Query: 59  ARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILIN 118
           AR  F  MT    SP    F  L     +    + V +    +   G   D  T  +++ 
Sbjct: 57  ARKVFDGMTRAGVSPMNRGFGALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVV- 115

Query: 119 CFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKM 178
                 R LC + R K+ +  F+ M+  G  P+V+ Y   I+G C+   +  A  + ++M
Sbjct: 116 ------RSLCEKGRFKDVSEFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEM 169

Query: 179 VSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEM-KGRGINPAVVVCTTLIHG 237
           V      GL  K N+++++ +ID LCK G  ++A  LFL++ K     P V   T +I G
Sbjct: 170 VG----RGL--KPNVYTHTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGG 223

Query: 238 FCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPD 297
           +C  G       L + M++ G +PN  T+  +I   CKGG  + A  L+  M Q G  P+
Sbjct: 224 YCREGKLARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPN 283

Query: 298 RFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYR 357
            +TYN+++DG+C  G+I  A ++     S+G K   ++Y ILI  +CK  ++  A+ L+ 
Sbjct: 284 IYTYNAVIDGFCKKGKIQEAYKVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFD 343

Query: 358 QIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNN 417
           +++ NG    +  Y +L+S   Q  Q   +QK FD+  +  + P   TY  +I G CK  
Sbjct: 344 RMVENGCCPDIEAYTSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVG 403

Query: 418 CVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYS 477
               A+++F  +  N        +  LI GLCK  RL+ A  L+  +  K LVP  VT  
Sbjct: 404 RSTLALRVFERMVQNGCFADSITYGALISGLCKESRLEEAKALYEGMLDKRLVPCEVTRV 463

Query: 478 IMIHGLCRKGKLEKANDFLLYMEKN 502
            +    CR+ K   A   L  ++K 
Sbjct: 464 TLTFEYCRREKTSIAVSVLDRLDKR 488



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 129/452 (28%), Positives = 227/452 (50%), Gaps = 20/452 (4%)

Query: 87  KNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAF 146
           K R  D V  F+R+++  G  P+ +     I+       GLC    +K+A  + + M+  
Sbjct: 121 KGRFKD-VSEFFRRMLETGTPPNVVNYTAWID-------GLCKRRYVKQAFHVLEEMVGR 172

Query: 147 GVRPDVITYGTLINGFCRTGNLSVALRLHKKMV-SGDYENGLISKTNIFSYSIIIDSLCK 205
           G++P+V T+ TLI+G C+ G    A RL  K++ S  Y      K N+ +Y+++I   C+
Sbjct: 173 GLKPNVYTHTTLIDGLCKIGWTERAFRLFLKLIKSSSY------KPNVHTYTVMIGGYCR 226

Query: 206 EGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLT 265
           EG + +A+ L + M  +G+ P     TTLI G C  G+++    L  +M   G  PN+ T
Sbjct: 227 EGKLARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYT 286

Query: 266 FNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMH 325
           +N +ID  CK GKI EA  +L +   +GL  D+ TY  L+  +C  G I  A ++F  M 
Sbjct: 287 YNAVIDGFCKKGKIQEAYKVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMV 346

Query: 326 SKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAG 385
             GC   + +Y  LI+ YC+   +EE+   + + +  G+  T  TY ++++G  + G++ 
Sbjct: 347 ENGCCPDIEAYTSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRST 406

Query: 386 YAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFN-CL 444
            A ++F+ M       D  TY  LI GLCK + ++EA  L+  + ++K     E+    L
Sbjct: 407 LALRVFERMVQNGCFADSITYGALISGLCKESRLEEAKALYEGM-LDKRLVPCEVTRVTL 465

Query: 445 IDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGC 504
               C+  +   A  +  +L ++  V TV    +++  L   G ++ A+ FL  +     
Sbjct: 466 TFEYCRREKTSIAVSVLDRLDKRQQVHTV---DVVVRKLSALGDVDAASLFLKKVLDEDY 522

Query: 505 APNVVTFNTLMHGFLQNNKTSKVVELLHKMAE 536
           A +  T+   ++   +NN+ +   E+  K ++
Sbjct: 523 AVDHATYTGFINSCYENNRYALASEMSEKFSK 554



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 116/437 (26%), Positives = 211/437 (48%), Gaps = 9/437 (2%)

Query: 132 RIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKT 191
           R+ EA  +   M + G+   V T   ++     TG+   A    +K+  G    G+    
Sbjct: 18  RLPEAADMVLEMRSHGLPLCVETANWVLRVGLETGSFVYA----RKVFDGMTRAGVSPMN 73

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
             F   +++   C+EG V++   L   M   G +     CT ++   C  G +++V+  F
Sbjct: 74  RGFGALVVV--CCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVSEFF 131

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
             ML+ G  PN++ +   ID LCK   + +A  +LE M+ RGL P+ +T+ +L+DG C +
Sbjct: 132 RRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGLCKI 191

Query: 312 GRIDTAREIFLSM-HSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVIT 370
           G  + A  +FL +  S   K  V +Y ++I GYC+   +  A  L  +++  G++    T
Sbjct: 192 GWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNT 251

Query: 371 YNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLE 430
           Y TL+ G  + G    A +L ++MK     P++ TYN +IDG CK   +QEA K+  M  
Sbjct: 252 YTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMAT 311

Query: 431 MNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLE 490
               +F    +  LI   CK G +  A +LF ++ + G  P +  Y+ +I   C++ ++E
Sbjct: 312 SQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLISTYCQQRQME 371

Query: 491 KANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSI 550
           ++  F       G  P   T+ +++ G+ +  +++  + +  +M   +     D  T+  
Sbjct: 372 ESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTLALRVFERMV--QNGCFADSITYGA 429

Query: 551 VVDLLAKDEKYHECSAV 567
           ++  L K+ +  E  A+
Sbjct: 430 LISGLCKESRLEEAKAL 446



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 98/395 (24%), Positives = 181/395 (45%), Gaps = 8/395 (2%)

Query: 199 IIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLG 258
           ++ +  + G + +A ++ LEM+  G+   V     ++      G++     +F  M   G
Sbjct: 9   MVAAFGEAGRLPEAADMVLEMRSHGLPLCVETANWVLRVGLETGSFVYARKVFDGMTRAG 68

Query: 259 PRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAR 318
             P    F  ++   C+ GK+ E + LL  M + G + D  T   ++   C  GR     
Sbjct: 69  VSPMNRGFGALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVS 128

Query: 319 EIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGL 378
           E F  M   G    VV+Y   I+G CK   V++A  +  +++  G++  V T+ TL+ GL
Sbjct: 129 EFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGL 188

Query: 379 FQAGQAGYAQKLFDEM-KLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFG 437
            + G    A +LF ++ K  + +P++ TY ++I G C+   +  A  L   +     +  
Sbjct: 189 CKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPN 248

Query: 438 IEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLL 497
              +  LI G CK G  D A+EL +K+ Q+G +P + TY+ +I G C+KGK+++A   L 
Sbjct: 249 TNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLR 308

Query: 498 YMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAK 557
                G   + +T+  L+    +    +  ++L  +M   E    PD   ++ ++    +
Sbjct: 309 MATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMV--ENGCCPDIEAYTSLISTYCQ 366

Query: 558 DEKYHECSAVSKSSYRACLYVTIF-QPSSLGSMIG 591
             +  E    S+  +  CL + +     +  SMI 
Sbjct: 367 QRQMEE----SQKFFDKCLMIGLLPTKQTYTSMIA 397


>gi|302806549|ref|XP_002985024.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
 gi|300147234|gb|EFJ13899.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
          Length = 570

 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 143/532 (26%), Positives = 241/532 (45%), Gaps = 80/532 (15%)

Query: 56  LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNI 115
           L+  R+ F +  H        + N L    A+ + +    +  +  ++   LPD  T N+
Sbjct: 48  LSSPRFGFQHSVH--------TGNALLDVFARTKRHREAGNLLKNELATTFLPDVETWNV 99

Query: 116 LIN--CFGNKER---------------------------GLCVENRIKEA---------- 136
           LI   C   +                             GLC   ++  A          
Sbjct: 100 LITGYCLAREPEEAFAVIREMEEDYGVAPSLKTHNLVLHGLCKSGKVLAAMDHFETTTTN 159

Query: 137 -------------TWLFKN------------MIAFGVRPDVITYGTLINGFCRTGNLSVA 171
                         WL KN            + A G  P + TY  L+NG C+ G L  A
Sbjct: 160 GCTIDIHTYTAIVDWLAKNKKIQDAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEA 219

Query: 172 LRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVC 231
           + L +K+V    +NG     ++ +Y+ +ID L KE    +A +LF EM  RG+    V  
Sbjct: 220 IDLLRKIV----DNGCTP--DVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLVLDTVCY 273

Query: 232 TTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQ 291
           T LI G   AG   + + ++  M   G  P+++T + MID LCK G+I  A  + + M  
Sbjct: 274 TALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEA 333

Query: 292 RGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEE 351
           RGL P+   Y++L+ G C   ++D A E+   M    C    ++YNILI+G CK  +VE 
Sbjct: 334 RGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEA 393

Query: 352 AMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILID 411
           A + + +++  G +  V TYN L+SG  +AG    A  +FD+M   +  P++ TY  LI 
Sbjct: 394 ARAFFDEMLEAGCKPDVYTYNILVSGFCKAGNTDAACGVFDDMSSSHCSPNVVTYGTLIS 453

Query: 412 GLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVP 471
           GLCK   + +A   F  ++         +++ L+DGLCK+G+L+    LF ++ + G+  
Sbjct: 454 GLCKRRQLTKASLYFQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSGVAN 513

Query: 472 TVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNK 523
           +     ++ H LC+  ++++A      + K G  P+   +N+++   +++ K
Sbjct: 514 SQTRTRLIFH-LCKANRVDEAVSLFNAIRKEG-MPHPYAYNSIISTLIKSAK 563



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 122/384 (31%), Positives = 188/384 (48%), Gaps = 15/384 (3%)

Query: 72  SPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVEN 131
           +P I+++N L   + K    +  I   RK+V  G  PD +T   LI+  G ++R      
Sbjct: 197 TPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSF---- 252

Query: 132 RIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKT 191
              EA  LFK M   G+  D + Y  LI G  + G +  A  ++K M S     G +   
Sbjct: 253 ---EAYKLFKEMALRGLVLDTVCYTALIRGLLQAGKIPQASSVYKTMTS----QGCVP-- 303

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
           ++ + S +ID LCK G +  A  +F  M+ RG+ P  VV + LIHG C A   +    + 
Sbjct: 304 DVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEML 363

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
            +M      P+ +T+N++ID LCK G +  A    + M++ G  PD +TYN L+ G+C  
Sbjct: 364 AQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILVSGFCKA 423

Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
           G  D A  +F  M S  C   VV+Y  LI+G CK   + +A   ++ +   G       Y
Sbjct: 424 GNTDAACGVFDDMSSSHCSPNVVTYGTLISGLCKRRQLTKASLYFQHMKERGCPPDSFVY 483

Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
           ++L+ GL ++G+      LFDEM+   V  +  T   LI  LCK N V EAV LF+ +  
Sbjct: 484 SSLVDGLCKSGKLEGGCMLFDEMERSGV-ANSQTRTRLIFHLCKANRVDEAVSLFNAIRK 542

Query: 432 NKFEFGIEIFNCLIDGLCKAGRLD 455
                    +N +I  L K+ +++
Sbjct: 543 EGMPHPYA-YNSIISTLIKSAKVN 565



 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 97/337 (28%), Positives = 157/337 (46%), Gaps = 38/337 (11%)

Query: 257 LGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV----- 311
            G + ++ T N ++D   +  +  EA  LL+  +     PD  T+N L+ GYCL      
Sbjct: 53  FGFQHSVHTGNALLDVFARTKRHREAGNLLKNELATTFLPDVETWNVLITGYCLAREPEE 112

Query: 312 -------------------------------GRIDTAREIFLSMHSKGCKHTVVSYNILI 340
                                          G++  A + F +  + GC   + +Y  ++
Sbjct: 113 AFAVIREMEEDYGVAPSLKTHNLVLHGLCKSGKVLAAMDHFETTTTNGCTIDIHTYTAIV 172

Query: 341 NGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVE 400
           +   K   +++A++L  +I +NG   T+ TYN LL+GL + G+   A  L  ++      
Sbjct: 173 DWLAKNKKIQDAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCT 232

Query: 401 PDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWEL 460
           PD+ TY  LIDGL K     EA KLF  + +         +  LI GL +AG++  A  +
Sbjct: 233 PDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLVLDTVCYTALIRGLLQAGKIPQASSV 292

Query: 461 FHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQ 520
           +  +  +G VP VVT S MI GLC+ G++  A      ME  G APN V ++ L+HG  +
Sbjct: 293 YKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCK 352

Query: 521 NNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAK 557
             K    +E+L +M +      PD  T++I++D L K
Sbjct: 353 ARKMDCALEMLAQMKKA--FCTPDTITYNILIDGLCK 387



 Score =  125 bits (314), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 78/259 (30%), Positives = 137/259 (52%), Gaps = 5/259 (1%)

Query: 315 DTAREIFLSMHSK--GCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYN 372
           D A E+F  + S   G +H+V + N L++ + +     EA +L +  ++      V T+N
Sbjct: 39  DLAWELFQCLSSPRFGFQHSVHTGNALLDVFARTKRHREAGNLLKNELATTFLPDVETWN 98

Query: 373 TLLSGLFQAGQAGYAQKLFDEMKL-YNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
            L++G   A +   A  +  EM+  Y V P L T+N+++ GLCK+  V  A+  F     
Sbjct: 99  VLITGYCLAREPEEAFAVIREMEEDYGVAPSLKTHNLVLHGLCKSGKVLAAMDHFETTTT 158

Query: 432 NKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEK 491
           N     I  +  ++D L K  ++ +A  L  K+   G  PT+ TY+ +++GLC+ G+LE+
Sbjct: 159 NGCTIDIHTYTAIVDWLAKNKKIQDAVALMEKITANGCTPTIATYNALLNGLCKMGRLEE 218

Query: 492 ANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIV 551
           A D L  +  NGC P+VVT+ +L+ G  +  ++ +  +L  +MA   R LV D   ++ +
Sbjct: 219 AIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMA--LRGLVLDTVCYTAL 276

Query: 552 VDLLAKDEKYHECSAVSKS 570
           +  L +  K  + S+V K+
Sbjct: 277 IRGLLQAGKIPQASSVYKT 295



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 53/193 (27%), Positives = 84/193 (43%), Gaps = 17/193 (8%)

Query: 33  AVSSPET-QLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHY 91
           A  +P+T   N  +   CKSG  ++  AR FF  M      P + ++N+L     K  + 
Sbjct: 369 AFCTPDTITYNILIDGLCKSG--DVEAARAFFDEMLEAGCKPDVYTYNILVSGFCKAGNT 426

Query: 92  DAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPD 151
           DA    +  + S    P+ +T   LI+       GLC   ++ +A+  F++M   G  PD
Sbjct: 427 DAACGVFDDMSSSHCSPNVVTYGTLIS-------GLCKRRQLTKASLYFQHMKERGCPPD 479

Query: 152 VITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDK 211
              Y +L++G C++G L     L  +M      N       IF        LCK   VD+
Sbjct: 480 SFVYSSLVDGLCKSGKLEGGCMLFDEMERSGVANSQTRTRLIF-------HLCKANRVDE 532

Query: 212 AKELFLEMKGRGI 224
           A  LF  ++  G+
Sbjct: 533 AVSLFNAIRKEGM 545


>gi|297847648|ref|XP_002891705.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297337547|gb|EFH67964.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 823

 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 147/524 (28%), Positives = 246/524 (46%), Gaps = 61/524 (11%)

Query: 91  YDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRP 150
           YD V+  Y  +      PD +  N L++        +    R+++A  ++  M   G   
Sbjct: 157 YDYVVELYDSV------PDVIACNALLSL-------VVKSRRLEDARKVYDEMCERGGCV 203

Query: 151 DVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVD 210
           D  +   ++ G C  G +       +K++   +  G +   NI  Y+ II   CK G ++
Sbjct: 204 DNYSTCIMVKGMCSEGKVEEG----RKLIEDRWGKGCVP--NIVFYNTIIGGYCKLGDIE 257

Query: 211 KAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPR---------- 260
            AK +F E+K +G  P +    T+I+GFC  G++   + L  E+ + G R          
Sbjct: 258 NAKLVFKELKLKGFMPTLETFGTMINGFCKKGDFVASDRLLEEVKERGLRVCVWFLNNII 317

Query: 261 -------------------------PNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLN 295
                                    P++ T+N++I+ LCK GK   A GLL+   ++GL 
Sbjct: 318 DAKYRHGFKVDPAESIRWIVANDCKPDIATYNILINRLCKEGKKEVAAGLLDEASKKGLI 377

Query: 296 PDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSL 355
               +Y  L+  YC     D A ++ L +  +GCK  +V+Y ILI+G     ++++A+++
Sbjct: 378 LTNLSYAPLIQAYCKSKEYDIASKLLLQLAERGCKPDIVTYGILIHGLVVSGHMDDAVNM 437

Query: 356 YRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCK 415
             ++I  GV      YN L+SGL + G+   A+ LF EM   ++ PD   Y  LIDG  +
Sbjct: 438 KVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRSILPDAYVYATLIDGFIR 497

Query: 416 NNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVT 475
           +    EA K+F +      +  +   N +I G C++G LD A    +++ ++ LVP   T
Sbjct: 498 SGDFDEARKVFTLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFT 557

Query: 476 YSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMA 535
           YS +I G  ++  +  A      MEKN C PNVVT+ +L++GF      S   E   +M 
Sbjct: 558 YSTIIDGYVKQQDMATAIKIFRDMEKNKCKPNVVTYTSLINGFCCQGDFSLAEETFKEMQ 617

Query: 536 EPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKSSYRACLYVT 579
              R+LVP+  T++ ++   AK     E S + K+ Y   L +T
Sbjct: 618 --SRDLVPNVVTYTTLIRSFAK-----ESSTLEKAVYYWELMMT 654



 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 145/551 (26%), Positives = 253/551 (45%), Gaps = 77/551 (13%)

Query: 41  LNEFLHENCKSGIINLNEARYFFGYMTHMQPS-PPISSFNLLFGAVAKNRHYDAVISFYR 99
           L+  LH   +SG   L++A   + Y+  +  S P + + N L   V K+R  +     Y 
Sbjct: 137 LSHVLHAYAESGF--LSKAVEIYDYVVELYDSVPDVIACNALLSLVVKSRRLEDARKVYD 194

Query: 100 KLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKE------------------------ 135
           ++   G   D  +  I++       +G+C E +++E                        
Sbjct: 195 EMCERGGCVDNYSTCIMV-------KGMCSEGKVEEGRKLIEDRWGKGCVPNIVFYNTII 247

Query: 136 -----------ATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKK------- 177
                      A  +FK +   G  P + T+GT+INGFC+ G+   + RL ++       
Sbjct: 248 GGYCKLGDIENAKLVFKELKLKGFMPTLETFGTMINGFCKKGDFVASDRLLEEVKERGLR 307

Query: 178 --------MVSGDYENGLI--------------SKTNIFSYSIIIDSLCKEGLVDKAKEL 215
                   ++   Y +G                 K +I +Y+I+I+ LCKEG  + A  L
Sbjct: 308 VCVWFLNNIIDAKYRHGFKVDPAESIRWIVANDCKPDIATYNILINRLCKEGKKEVAAGL 367

Query: 216 FLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCK 275
             E   +G+    +    LI  +C +  ++  + L +++ + G +P+++T+ ++I  L  
Sbjct: 368 LDEASKKGLILTNLSYAPLIQAYCKSKEYDIASKLLLQLAERGCKPDIVTYGILIHGLVV 427

Query: 276 GGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVS 335
            G +++A  +   +I RG++PD   YN LM G C  GR   A+ +F  M  +        
Sbjct: 428 SGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRSILPDAYV 487

Query: 336 YNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMK 395
           Y  LI+G+ +  + +EA  ++   +  GV+  V+ +N ++ G  ++G    A    + M 
Sbjct: 488 YATLIDGFIRSGDFDEARKVFTLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMN 547

Query: 396 LYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLD 455
             ++ PD  TY+ +IDG  K   +  A+K+F  +E NK +  +  +  LI+G C  G   
Sbjct: 548 EEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRDMEKNKCKPNVVTYTSLINGFCCQGDFS 607

Query: 456 NAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGK-LEKANDFLLYMEKNGCAPNVVTFNTL 514
            A E F ++  + LVP VVTY+ +I    ++   LEKA  +   M  N C PN VTFN L
Sbjct: 608 LAEETFKEMQSRDLVPNVVTYTTLIRSFAKESSTLEKAVYYWELMMTNKCVPNEVTFNCL 667

Query: 515 MHGFLQNNKTS 525
           + GF++  KTS
Sbjct: 668 LQGFVK--KTS 676



 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 134/523 (25%), Positives = 234/523 (44%), Gaps = 42/523 (8%)

Query: 55  NLNEARYFFGYMTHMQPS----------PPISSFNLLFGAVAKNRHYDAVISFYRKLVSI 104
           N+ +A+Y  G+      S          P I+++N+L   + K    +       +    
Sbjct: 315 NIIDAKYRHGFKVDPAESIRWIVANDCKPDIATYNILINRLCKEGKKEVAAGLLDEASKK 374

Query: 105 GLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCR 164
           GL+   L+   LI  +       C       A+ L   +   G +PD++TYG LI+G   
Sbjct: 375 GLILTNLSYAPLIQAY-------CKSKEYDIASKLLLQLAERGCKPDIVTYGILIHGLVV 427

Query: 165 TGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGI 224
           +G++  A+ +  K++    + G+     I  Y++++  LCK G    AK LF EM  R I
Sbjct: 428 SGHMDDAVNMKVKLI----DRGVSPDAAI--YNMLMSGLCKTGRFLPAKLLFSEMLDRSI 481

Query: 225 NPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANG 284
            P   V  TLI GF  +G+++E   +F   ++ G + +++  N MI   C+ G ++EA  
Sbjct: 482 LPDAYVYATLIDGFIRSGDFDEARKVFTLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALA 541

Query: 285 LLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYC 344
            +  M +  L PD+FTY++++DGY     + TA +IF  M    CK  VV+Y  LING+C
Sbjct: 542 CMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRDMEKNKCKPNVVTYTSLINGFC 601

Query: 345 KILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYN-VEPDL 403
              +   A   ++++ S  +   V+TY TL+    +          + E+ + N   P+ 
Sbjct: 602 CQGDFSLAEETFKEMQSRDLVPNVVTYTTLIRSFAKESSTLEKAVYYWELMMTNKCVPNE 661

Query: 404 STYNILIDGLCKN------------NCVQEAV--KLFHMLEMNKFEFGIEIFNCLIDGLC 449
            T+N L+ G  K             N  Q  +  + FH ++ + +      +N ++  LC
Sbjct: 662 VTFNCLLQGFVKKTSGRFLGEPDGFNHGQSFLFFEFFHRMKSDGWSDHGAAYNSVLVCLC 721

Query: 450 KAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKG--KLEKANDFLLYMEKNGCAPN 507
             G +  A  L  ++ +KG  P  V+++ ++HG C  G  K  +  DF    EK      
Sbjct: 722 VHGMVKTACMLQDRMVKKGFSPDPVSFAAILHGFCVVGNSKQWRNMDFRNLDEKG--LEV 779

Query: 508 VVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSI 550
            V ++ ++   L      +   +LH M E      P+    S+
Sbjct: 780 AVRYSRVLEQHLPKAVICEASTILHAMVEKADTKEPEICRISV 822


>gi|255566084|ref|XP_002524030.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223536757|gb|EEF38398.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1016

 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 131/472 (27%), Positives = 238/472 (50%), Gaps = 45/472 (9%)

Query: 106 LLPDFLTLNILI---NCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGF 162
           ++P  L  N LI   N FG           + +   ++  M+   V P+V T+  L++ +
Sbjct: 6   IVPTLLLWNQLIYHFNAFG----------LVSQVCDIYTEMLCSAVPPNVYTHNVLVHAW 55

Query: 163 CRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGR 222
           C+ GNL +AL L + +   D E       +  +Y+ +I   C+ GLV++A      M  +
Sbjct: 56  CKMGNLILALDLLRNV---DVE------VDTVTYNTVIWGFCQHGLVNQAFGFLSIMVKK 106

Query: 223 GINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEA 282
                 + C  L+ GFC  G  +    +   ++  G   +++ FN +ID  CK G+++ A
Sbjct: 107 DTCFDTITCNILVKGFCRIGLAKYGERIMDNLVSGGTCKDVIGFNTLIDGYCKAGEMSLA 166

Query: 283 NGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSM-HSKGCKHTV-------- 333
             L+E M + GL  D  +YN+L++G+C  G  D A+ +   +  S+G K +V        
Sbjct: 167 LDLVERMRKEGLLSDIVSYNTLINGFCKRGEYDKAKSLLHEISESRGVKDSVFFNIDDRI 226

Query: 334 ------------VSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQA 381
                       ++Y  +I+ YCK   +EEA +LY ++I NG    V+TY+++++GL + 
Sbjct: 227 KKDDNLNLEADLITYTTIISTYCKQHGLEEARALYEEMIINGFLPDVVTYSSIVNGLCKD 286

Query: 382 GQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIF 441
           G+   AQ+L  EMK   V+P+   Y  LID L K     EA      L +      + + 
Sbjct: 287 GRLSEAQELLREMKKMGVDPNHVAYTTLIDSLFKAGSAWEAFACQSQLVVRGMTLDLVMC 346

Query: 442 NCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEK 501
             L+DGL K+ +   A ++F  L +  L+P  +TY+ +I G C+ G +E+    L  ME+
Sbjct: 347 TTLVDGLFKSSKPKEAEDMFRALSKLNLIPNSITYTALIDGYCKVGDMERVESLLQEMEE 406

Query: 502 NGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
               PNV+T++++++G+ +     + + ++ KM   ++N++P+   ++I++D
Sbjct: 407 KHINPNVITYSSIINGYTKKGILDEAINVMKKML--DQNIIPNAYVYAILID 456



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 132/411 (32%), Positives = 207/411 (50%), Gaps = 14/411 (3%)

Query: 78  FNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEAT 137
           F++L   + + +  D      + + S GLL D +    L++ F    +     N ++E T
Sbjct: 486 FDVLVNNLKRGKRMDEAEELLKDVTSRGLLLDHVNYTSLMDGFFKAGKESAALNMVEEMT 545

Query: 138 WLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYS 197
              +  I F    DV+TY  LING    G         K + SG  E GL    N  +Y+
Sbjct: 546 ---EKSIPF----DVVTYNVLINGLLEHGKYEA-----KSVYSGMIEMGL--APNQATYN 591

Query: 198 IIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDL 257
           I+I + CK+G +D A EL+ EMK   I P+ + C TL+ G   AG  E+   +  EM  +
Sbjct: 592 IMIKAYCKQGELDNALELWNEMKSHKIMPSSITCNTLVVGLSEAGEIEKAMNVLNEMSVM 651

Query: 258 GPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTA 317
           G  PNL+   V+++   K GK N    + E ++  GL  ++  YN+L+  +C +     A
Sbjct: 652 GIHPNLVIHRVLLNASSKSGKANAVLQMHEQLVDMGLKINQEAYNNLIVVFCRLRMTKKA 711

Query: 318 REIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSG 377
             +   M   G     V+YN LI GYC+  +V++A++ Y Q+++ GV   ++TYN LL G
Sbjct: 712 TSVLKYMIRDGFVADTVTYNALIRGYCESSHVKKALATYTQMLNEGVSPNIVTYNLLLGG 771

Query: 378 LFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFG 437
           L  AG      +LFD+MK   + PD STY+ LI G  K    +E+++L+  +    F   
Sbjct: 772 LLGAGLMAERDELFDKMKENGLNPDASTYDTLISGYGKIGNKKESIRLYCEMVAQGFVPK 831

Query: 438 IEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGK 488
              +N LI    K G++D A EL +++  +G+ P+  TY I+I G C   K
Sbjct: 832 TSTYNVLISDFAKVGKMDQARELLNEMQVRGVPPSSSTYDILICGWCNLSK 882



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 146/538 (27%), Positives = 247/538 (45%), Gaps = 51/538 (9%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CK G   L+EA+     M  M   P   ++  L  ++ K        +   +LV  G+  
Sbjct: 284 CKDG--RLSEAQELLREMKKMGVDPNHVAYTTLIDSLFKAGSAWEAFACQSQLVVRGMTL 341

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           D +    L++       GL   ++ KEA  +F+ +    + P+ ITY  LI+G+C+ G++
Sbjct: 342 DLVMCTTLVD-------GLFKSSKPKEAEDMFRALSKLNLIPNSITYTALIDGYCKVGDM 394

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
                L ++M     E   I+  N+ +YS II+   K+G++D+A  +  +M  + I P  
Sbjct: 395 ERVESLLQEM-----EEKHIN-PNVITYSSIINGYTKKGILDEAINVMKKMLDQNIIPNA 448

Query: 229 VVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLEL 288
            V   LI G+C AG  E    L+ EM   G + N + F+V+++ L +G +++EA  LL+ 
Sbjct: 449 YVYAILIDGYCKAGKQEIATDLYNEMKLSGLKVNNVLFDVLVNNLKRGKRMDEAEELLKD 508

Query: 289 MIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILI-------- 340
           +  RGL  D   Y SLMDG+   G+   A  +   M  K     VV+YN+LI        
Sbjct: 509 VTSRGLLLDHVNYTSLMDGFFKAGKESAALNMVEEMTEKSIPFDVVTYNVLINGLLEHGK 568

Query: 341 --------------------------NGYCKILNVEEAMSLYRQIISNGVRQTVITYNTL 374
                                       YCK   ++ A+ L+ ++ S+ +  + IT NTL
Sbjct: 569 YEAKSVYSGMIEMGLAPNQATYNIMIKAYCKQGELDNALELWNEMKSHKIMPSSITCNTL 628

Query: 375 LSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKF 434
           + GL +AG+   A  + +EM +  + P+L  + +L++   K+      +++   L     
Sbjct: 629 VVGLSEAGEIEKAMNVLNEMSVMGIHPNLVIHRVLLNASSKSGKANAVLQMHEQLVDMGL 688

Query: 435 EFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKAND 494
           +   E +N LI   C+      A  +   + + G V   VTY+ +I G C    ++KA  
Sbjct: 689 KINQEAYNNLIVVFCRLRMTKKATSVLKYMIRDGFVADTVTYNALIRGYCESSHVKKALA 748

Query: 495 FLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVV 552
               M   G +PN+VT+N L+ G L     ++  EL  KM   E  L PD +T+  ++
Sbjct: 749 TYTQMLNEGVSPNIVTYNLLLGGLLGAGLMAERDELFDKM--KENGLNPDASTYDTLI 804



 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 134/505 (26%), Positives = 243/505 (48%), Gaps = 72/505 (14%)

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           D +T NIL+       +G C     K    +  N+++ G   DVI + TLI+G+C+ G +
Sbjct: 111 DTITCNILV-------KGFCRIGLAKYGERIMDNLVSGGTCKDVIGFNTLIDGYCKAGEM 163

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEM-KGRGINPA 227
           S+AL L ++M     + GL+S  +I SY+ +I+  CK G  DKAK L  E+ + RG+  +
Sbjct: 164 SLALDLVERM----RKEGLLS--DIVSYNTLINGFCKRGEYDKAKSLLHEISESRGVKDS 217

Query: 228 V--------------------VVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFN 267
           V                    +  TT+I  +C     EE   L+ EM+  G  P+++T++
Sbjct: 218 VFFNIDDRIKKDDNLNLEADLITYTTIISTYCKQHGLEEARALYEEMIINGFLPDVVTYS 277

Query: 268 VMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG--------------- 312
            +++ LCK G+++EA  LL  M + G++P+   Y +L+D     G               
Sbjct: 278 SIVNGLCKDGRLSEAQELLREMKKMGVDPNHVAYTTLIDSLFKAGSAWEAFACQSQLVVR 337

Query: 313 --------------------RIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEA 352
                               +   A ++F ++         ++Y  LI+GYCK+ ++E  
Sbjct: 338 GMTLDLVMCTTLVDGLFKSSKPKEAEDMFRALSKLNLIPNSITYTALIDGYCKVGDMERV 397

Query: 353 MSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDG 412
            SL +++    +   VITY+++++G  + G    A  +  +M   N+ P+   Y ILIDG
Sbjct: 398 ESLLQEMEEKHINPNVITYSSIINGYTKKGILDEAINVMKKMLDQNIIPNAYVYAILIDG 457

Query: 413 LCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPT 472
            CK    + A  L++ ++++  +    +F+ L++ L +  R+D A EL   +  +GL+  
Sbjct: 458 YCKAGKQEIATDLYNEMKLSGLKVNNVLFDVLVNNLKRGKRMDEAEELLKDVTSRGLLLD 517

Query: 473 VVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLH 532
            V Y+ ++ G  + GK   A + +  M +     +VVT+N L++G L++ K  +   +  
Sbjct: 518 HVNYTSLMDGFFKAGKESAALNMVEEMTEKSIPFDVVTYNVLINGLLEHGKY-EAKSVYS 576

Query: 533 KMAEPERNLVPDDTTFSIVVDLLAK 557
            M   E  L P+  T++I++    K
Sbjct: 577 GMI--EMGLAPNQATYNIMIKAYCK 599



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 81/320 (25%), Positives = 161/320 (50%), Gaps = 13/320 (4%)

Query: 58  EARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILI 117
           EA+  +  M  M  +P  +++N++  A  K    D  +  + ++ S  ++P  +T N L+
Sbjct: 570 EAKSVYSGMIEMGLAPNQATYNIMIKAYCKQGELDNALELWNEMKSHKIMPSSITCNTLV 629

Query: 118 NCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKK 177
                   GL     I++A  +   M   G+ P+++ +  L+N   ++G  +  L++H++
Sbjct: 630 -------VGLSEAGEIEKAMNVLNEMSVMGIHPNLVIHRVLLNASSKSGKANAVLQMHEQ 682

Query: 178 MVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHG 237
           +V    + GL  K N  +Y+ +I   C+  +  KA  +   M   G     V    LI G
Sbjct: 683 LV----DMGL--KINQEAYNNLIVVFCRLRMTKKATSVLKYMIRDGFVADTVTYNALIRG 736

Query: 238 FCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPD 297
           +C + + ++    + +ML+ G  PN++T+N+++  L   G + E + L + M + GLNPD
Sbjct: 737 YCESSHVKKALATYTQMLNEGVSPNIVTYNLLLGGLLGAGLMAERDELFDKMKENGLNPD 796

Query: 298 RFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYR 357
             TY++L+ GY  +G    +  ++  M ++G      +YN+LI+ + K+  +++A  L  
Sbjct: 797 ASTYDTLISGYGKIGNKKESIRLYCEMVAQGFVPKTSTYNVLISDFAKVGKMDQARELLN 856

Query: 358 QIISNGVRQTVITYNTLLSG 377
           ++   GV  +  TY+ L+ G
Sbjct: 857 EMQVRGVPPSSSTYDILICG 876



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 73/298 (24%), Positives = 133/298 (44%), Gaps = 26/298 (8%)

Query: 289 MIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILN 348
           M +  + P    +N L+  +   G +    +I+  M        V ++N+L++ +CK+ N
Sbjct: 1   MRKHNIVPTLLLWNQLIYHFNAFGLVSQVCDIYTEMLCSAVPPNVYTHNVLVHAWCKMGN 60

Query: 349 VEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNI 408
           +  A+ L R +    V    +TYNT++ G  Q G    A      M   +   D  T NI
Sbjct: 61  LILALDLLRNV---DVEVDTVTYNTVIWGFCQHGLVNQAFGFLSIMVKKDTCFDTITCNI 117

Query: 409 LIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKG 468
           L+ G C+    +   ++   L        +  FN LIDG CKAG +  A +L  ++ ++G
Sbjct: 118 LVKGFCRIGLAKYGERIMDNLVSGGTCKDVIGFNTLIDGYCKAGEMSLALDLVERMRKEG 177

Query: 469 LVPTVVTYSIMIHGLCRKGKLEKANDFLLYM-EKNGCAPNV------------------- 508
           L+  +V+Y+ +I+G C++G+ +KA   L  + E  G   +V                   
Sbjct: 178 LLSDIVSYNTLINGFCKRGEYDKAKSLLHEISESRGVKDSVFFNIDDRIKKDDNLNLEAD 237

Query: 509 -VTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECS 565
            +T+ T++  + + +   +   L  +M       +PD  T+S +V+ L KD +  E  
Sbjct: 238 LITYTTIISTYCKQHGLEEARALYEEMII--NGFLPDVVTYSSIVNGLCKDGRLSEAQ 293


>gi|242056139|ref|XP_002457215.1| hypothetical protein SORBIDRAFT_03g003430 [Sorghum bicolor]
 gi|241929190|gb|EES02335.1| hypothetical protein SORBIDRAFT_03g003430 [Sorghum bicolor]
          Length = 573

 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 132/430 (30%), Positives = 216/430 (50%), Gaps = 11/430 (2%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
           P   S N L  A+ +    D     +R  +   + PD  T NI+I+       GLC   +
Sbjct: 151 PSAFSVNALLAALVRADRVDLAERAFRAALRRRVSPDKFTFNIVIS-------GLCKTGQ 203

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
           +++A  + K+M  +G+ P V+TY TLI+G+ + G        H  M+  +     IS  N
Sbjct: 204 LRKAGDVAKDMRGWGLMPSVVTYNTLIDGYYKWGR--AGKMYHVDMLLKEMNQAGIS-PN 260

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
           + +++++I+  CKE  +  A ++F EM+  GI   +V  T+L+ G C  G  E+   L  
Sbjct: 261 VVTFNVLINGYCKESNITAAIKVFEEMRQHGIPANMVTYTSLVSGLCREGKVEDSMKLVE 320

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
           EM +LG    L T N +++  CK G + EA G ++ M Q+G+ P+  TYN+L+DGY  +G
Sbjct: 321 EMEELG-LATLPTLNSVLNGFCKKGMMVEAEGWVDGMAQKGMKPNVVTYNTLIDGYQRLG 379

Query: 313 RIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYN 372
           ++  A     +M  KG    V +YN LI G+    +      L  ++   GV+  ++TYN
Sbjct: 380 KMKEATAAKGAMAGKGISPDVKTYNCLITGFTTSTDWRSVSGLLDEMKETGVKADLVTYN 439

Query: 373 TLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMN 432
            L+  L   G+   A KL DEM    +EP   TYN +I+G C+    + A  +   +E  
Sbjct: 440 VLIGALCCKGEVRKAVKLLDEMVEVGLEPKHRTYNAIINGFCEKGDAKGAHDIRIRMEKC 499

Query: 433 KFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKA 492
           K    +   N  +   CK G++D A  + +++ +KGLVP  +TY I+  G+  KG +   
Sbjct: 500 KKRANVVTCNVFLKYFCKMGKMDEANVVLNEMLEKGLVPNRITYEIINSGMIEKGYVPDI 559

Query: 493 NDFLLYMEKN 502
             +   + KN
Sbjct: 560 RGYAADVSKN 569



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 116/361 (32%), Positives = 186/361 (51%), Gaps = 6/361 (1%)

Query: 194 FSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGF---CCAGNWEEVNGL 250
           F+++I+I  LCK G + KA ++  +M+G G+ P+VV   TLI G+     AG    V+ L
Sbjct: 189 FTFNIVISGLCKTGQLRKAGDVAKDMRGWGLMPSVVTYNTLIDGYYKWGRAGKMYHVDML 248

Query: 251 FIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCL 310
             EM   G  PN++TFNV+I+  CK   I  A  + E M Q G+  +  TY SL+ G C 
Sbjct: 249 LKEMNQAGISPNVVTFNVLINGYCKESNITAAIKVFEEMRQHGIPANMVTYTSLVSGLCR 308

Query: 311 VGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVIT 370
            G+++ + ++   M   G   T+ + N ++NG+CK   + EA      +   G++  V+T
Sbjct: 309 EGKVEDSMKLVEEMEELGLA-TLPTLNSVLNGFCKKGMMVEAEGWVDGMAQKGMKPNVVT 367

Query: 371 YNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLE 430
           YNTL+ G  + G+   A      M    + PD+ TYN LI G   +   +    L   ++
Sbjct: 368 YNTLIDGYQRLGKMKEATAAKGAMAGKGISPDVKTYNCLITGFTTSTDWRSVSGLLDEMK 427

Query: 431 MNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLE 490
               +  +  +N LI  LC  G +  A +L  ++ + GL P   TY+ +I+G C KG  +
Sbjct: 428 ETGVKADLVTYNVLIGALCCKGEVRKAVKLLDEMVEVGLEPKHRTYNAIINGFCEKGDAK 487

Query: 491 KANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSI 550
            A+D  + MEK     NVVT N  +  F +  K  +   +L++M   E+ LVP+  T+ I
Sbjct: 488 GAHDIRIRMEKCKKRANVVTCNVFLKYFCKMGKMDEANVVLNEML--EKGLVPNRITYEI 545

Query: 551 V 551
           +
Sbjct: 546 I 546



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 118/377 (31%), Positives = 187/377 (49%), Gaps = 10/377 (2%)

Query: 148 VRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEG 207
           V PD  T+  +I+G C+TG L  A  + K M       G     ++ +Y+ +ID   K G
Sbjct: 184 VSPDKFTFNIVISGLCKTGQLRKAGDVAKDM------RGWGLMPSVVTYNTLIDGYYKWG 237

Query: 208 LVDK---AKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLL 264
              K      L  EM   GI+P VV    LI+G+C   N      +F EM   G   N++
Sbjct: 238 RAGKMYHVDMLLKEMNQAGISPNVVTFNVLINGYCKESNITAAIKVFEEMRQHGIPANMV 297

Query: 265 TFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSM 324
           T+  ++  LC+ GK+ ++  L+E M + GL     T NS+++G+C  G +  A      M
Sbjct: 298 TYTSLVSGLCREGKVEDSMKLVEEMEELGL-ATLPTLNSVLNGFCKKGMMVEAEGWVDGM 356

Query: 325 HSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQA 384
             KG K  VV+YN LI+GY ++  ++EA +    +   G+   V TYN L++G   +   
Sbjct: 357 AQKGMKPNVVTYNTLIDGYQRLGKMKEATAAKGAMAGKGISPDVKTYNCLITGFTTSTDW 416

Query: 385 GYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCL 444
                L DEMK   V+ DL TYN+LI  LC    V++AVKL   +     E     +N +
Sbjct: 417 RSVSGLLDEMKETGVKADLVTYNVLIGALCCKGEVRKAVKLLDEMVEVGLEPKHRTYNAI 476

Query: 445 IDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGC 504
           I+G C+ G    A ++  ++ +      VVT ++ +   C+ GK+++AN  L  M + G 
Sbjct: 477 INGFCEKGDAKGAHDIRIRMEKCKKRANVVTCNVFLKYFCKMGKMDEANVVLNEMLEKGL 536

Query: 505 APNVVTFNTLMHGFLQN 521
            PN +T+  +  G ++ 
Sbjct: 537 VPNRITYEIINSGMIEK 553


>gi|357142290|ref|XP_003572522.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 669

 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 150/577 (25%), Positives = 259/577 (44%), Gaps = 79/577 (13%)

Query: 55  NLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLN 114
           +L+ A    G M   +P P + + N+L   +  +R           L   G   D ++ N
Sbjct: 91  DLDAALRLVGSMPSSEP-PAVIACNILIKKLCAHRRLADAERVLDALKESGSA-DAVSHN 148

Query: 115 ILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRL 174
            L+        G C + R+ +A  + +     G   +V+TY  LING+CR+G L+ AL L
Sbjct: 149 TLVA-------GYCRDGRLADAERVLEAAKVSGA-ANVVTYTALINGYCRSGRLADALNL 200

Query: 175 HKKM-VSGD-YENGLISK------------------------TNIFSYSIIIDSLCKEGL 208
              M V+ D Y    + K                         N  +++  I S C+ GL
Sbjct: 201 IASMPVAPDTYTYNTVLKGLCGAKQWEKAEELMEEMIRNNCHPNEVTFATQIRSFCQNGL 260

Query: 209 VDKAKELFLEMKGRGINPAVVVCTTLIHGF------------------------------ 238
           +D A +L   M   G  P VV+ +TL++GF                              
Sbjct: 261 LDHAVQLLERMPRYGCTPDVVIYSTLVNGFSEQGRVDDALVLLNTMLCKPNTVCYNAALK 320

Query: 239 --CCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNP 296
             C A  W++V  L  EM+     PN  TF+++  CLC+ G ++ A  ++E M + G  P
Sbjct: 321 GLCMAERWKDVGELIAEMVRKDCPPNEATFSMLTSCLCQHGLVDCAMEVVEQMQKYGCRP 380

Query: 297 DRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLY 356
           D   YN+L++ +   GR+D A  +  SM    C    +S+N  +   C+     +   L 
Sbjct: 381 DVVIYNTLINYFSEQGRVDDALMLLDSML---CNPDTISFNAALKALCRTERWYDVEELI 437

Query: 357 RQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKN 416
            Q++        +T+N L+  L Q G   +A ++F++M  Y   PD+ TY+ LI+G  + 
Sbjct: 438 AQMLREDCPLIEMTFNILIDSLCQHGLVNHAIEVFEQMPKYRCTPDIVTYSSLINGFSEQ 497

Query: 417 NCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTY 476
             V+ A++LF  +      F    +N ++ GLC+A R ++A EL   + +K   P  +T+
Sbjct: 498 GLVESAIELFQSMPCKPDIFS---YNAVLKGLCRAARWEDAGELIANMARKDCPPNEITF 554

Query: 477 SIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAE 536
           +I+I+ LC+KG  ++A +    M + G  P++ T+N L++GF +  +    + LL  M+ 
Sbjct: 555 NILINSLCQKGFADRAIEVFKQMPEYGSTPDIFTYNALINGFSEQGRLDDALNLLSTMS- 613

Query: 537 PERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKSSYR 573
                 PD  +++  +  L + E++ E   +     R
Sbjct: 614 ----CKPDAISYNSTLKGLCRAERWKEAEEIVAEMLR 646



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 133/502 (26%), Positives = 227/502 (45%), Gaps = 47/502 (9%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           C+SG   L +A      +  M  +P   ++N +   +   + ++       +++     P
Sbjct: 189 CRSG--RLADA---LNLIASMPVAPDTYTYNTVLKGLCGAKQWEKAEELMEEMIRNNCHP 243

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           + +T       F  + R  C    +  A  L + M  +G  PDV+ Y TL+NGF   G +
Sbjct: 244 NEVT-------FATQIRSFCQNGLLDHAVQLLERMPRYGCTPDVVIYSTLVNGFSEQGRV 296

Query: 169 SVALRLHKKMVS-----------------------GDYENGLISK---TNIFSYSIIIDS 202
             AL L   M+                        G+    ++ K    N  ++S++   
Sbjct: 297 DDALVLLNTMLCKPNTVCYNAALKGLCMAERWKDVGELIAEMVRKDCPPNEATFSMLTSC 356

Query: 203 LCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPN 262
           LC+ GLVD A E+  +M+  G  P VV+  TLI+ F   G  ++   L   ML     P+
Sbjct: 357 LCQHGLVDCAMEVVEQMQKYGCRPDVVIYNTLINYFSEQGRVDDALMLLDSML---CNPD 413

Query: 263 LLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFL 322
            ++FN  +  LC+  +  +   L+  M++        T+N L+D  C  G ++ A E+F 
Sbjct: 414 TISFNAALKALCRTERWYDVEELIAQMLREDCPLIEMTFNILIDSLCQHGLVNHAIEVFE 473

Query: 323 SMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAG 382
            M    C   +V+Y+ LING+ +   VE A+ L++   S   +  + +YN +L GL +A 
Sbjct: 474 QMPKYRCTPDIVTYSSLINGFSEQGLVESAIELFQ---SMPCKPDIFSYNAVLKGLCRAA 530

Query: 383 QAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFN 442
           +   A +L   M   +  P+  T+NILI+ LC+      A+++F  +        I  +N
Sbjct: 531 RWEDAGELIANMARKDCPPNEITFNILINSLCQKGFADRAIEVFKQMPEYGSTPDIFTYN 590

Query: 443 CLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKN 502
            LI+G  + GRLD+A  L   +  K   P  ++Y+  + GLCR  + ++A + +  M + 
Sbjct: 591 ALINGFSEQGRLDDALNLLSTMSCK---PDAISYNSTLKGLCRAERWKEAEEIVAEMLRK 647

Query: 503 GCAPNVVTFNTLMHGFLQNNKT 524
            C PN VTF      F+ N  T
Sbjct: 648 KCPPNEVTFKYANQLFIPNRIT 669



 Score =  128 bits (322), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 95/402 (23%), Positives = 186/402 (46%), Gaps = 20/402 (4%)

Query: 156 GTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKEL 215
           G  +    +  +L  ALRL   M S +          + + +I+I  LC    +  A+ +
Sbjct: 80  GQTLRRLVQLEDLDAALRLVGSMPSSE-------PPAVIACNILIKKLCAHRRLADAERV 132

Query: 216 FLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCK 275
              +K  G   AV    TL+ G+C  G   +   + +E   +    N++T+  +I+  C+
Sbjct: 133 LDALKESGSADAVSH-NTLVAGYCRDGRLADAERV-LEAAKVSGAANVVTYTALINGYCR 190

Query: 276 GGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVS 335
            G++ +A   L L+    + PD +TYN+++ G C   + + A E+   M    C    V+
Sbjct: 191 SGRLADA---LNLIASMPVAPDTYTYNTVLKGLCGAKQWEKAEELMEEMIRNNCHPNEVT 247

Query: 336 YNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMK 395
           +   I  +C+   ++ A+ L  ++   G    V+ Y+TL++G  + G+   A  L + M 
Sbjct: 248 FATQIRSFCQNGLLDHAVQLLERMPRYGCTPDVVIYSTLVNGFSEQGRVDDALVLLNTML 307

Query: 396 LYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLD 455
               +P+   YN  + GLC     ++  +L   +           F+ L   LC+ G +D
Sbjct: 308 ---CKPNTVCYNAALKGLCMAERWKDVGELIAEMVRKDCPPNEATFSMLTSCLCQHGLVD 364

Query: 456 NAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLM 515
            A E+  ++ + G  P VV Y+ +I+    +G+++   D L+ ++   C P+ ++FN  +
Sbjct: 365 CAMEVVEQMQKYGCRPDVVIYNTLINYFSEQGRVD---DALMLLDSMLCNPDTISFNAAL 421

Query: 516 HGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAK 557
               +  +   V EL+ +M   +  L+  + TF+I++D L +
Sbjct: 422 KALCRTERWYDVEELIAQMLREDCPLI--EMTFNILIDSLCQ 461



 Score = 48.9 bits (115), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 39/155 (25%), Positives = 62/155 (40%), Gaps = 23/155 (14%)

Query: 38  ETQLNEFLHENCKSGIINLNE--------ARY-----FFGYMTHMQPSPPISSFNLLFGA 84
           E+ +  F    CK  I + N         AR+         M      P   +FN+L  +
Sbjct: 501 ESAIELFQSMPCKPDIFSYNAVLKGLCRAARWEDAGELIANMARKDCPPNEITFNILINS 560

Query: 85  VAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMI 144
           + +    D  I  ++++   G  PD  T N LIN F   E+G     R+ +A  L   M 
Sbjct: 561 LCQKGFADRAIEVFKQMPEYGSTPDIFTYNALINGFS--EQG-----RLDDALNLLSTM- 612

Query: 145 AFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMV 179
               +PD I+Y + + G CR      A  +  +M+
Sbjct: 613 --SCKPDAISYNSTLKGLCRAERWKEAEEIVAEML 645


>gi|297793055|ref|XP_002864412.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297310247|gb|EFH40671.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 1245

 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 139/524 (26%), Positives = 244/524 (46%), Gaps = 50/524 (9%)

Query: 72  SPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVEN 131
           +P + + N + G++ K+    +V SF ++++   + PD  T NILIN        LC E 
Sbjct: 155 NPSVYTCNAILGSIVKSCEDVSVWSFLKEMLKRKICPDVATFNILINV-------LCAEG 207

Query: 132 RIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKT 191
             K++++L + M   G  P ++TY T+++ +C+ G    A+ L       D+ N      
Sbjct: 208 SFKKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELL------DHMNLKGVNA 261

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
           ++ +Y+++I  LC+     K   L  +M+ R I+P  V   TL++GF   G       L 
Sbjct: 262 DVCTYNMLIHDLCRSNRSAKGYLLLRDMRKRMIHPNEVTYNTLLNGFSNEGKVLIARQLL 321

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
            EML  G  PN +TFN +ID     G   EA  +  +M  +GL     +Y  L+DG C  
Sbjct: 322 NEMLTFGLSPNHVTFNALIDGHISEGNFKEALKMFHMMEAKGLIGTEVSYGVLLDGLCKN 381

Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
              D AR  ++ M   G     ++Y  +I+G CK   ++EA+ +  ++  +G+   ++TY
Sbjct: 382 AEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVMLNEMSKDGIDPDIVTY 441

Query: 372 NTLLSGLFQAGQAGYAQ-----------------------------------KLFDEMKL 396
           + L++G  + G+   A+                                   ++++ M L
Sbjct: 442 SALINGFCRVGRLKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKETIRIYEAMIL 501

Query: 397 YNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDN 456
               PD  T+N+L+  LCK   V EA +    +  +        F+CLI+G   +G    
Sbjct: 502 EGNTPDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNAVSFDCLINGYGSSGEGLK 561

Query: 457 AWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMH 516
           A+ +F ++ + G  PT  TY  ++ GLC+ G L  A  FL  ++    A + V  NTL+ 
Sbjct: 562 AFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLIAAEKFLKSLQNVPAAVDTVMCNTLIT 621

Query: 517 GFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEK 560
              ++    K V L  +M   +R+++PD  T++ ++  L +  K
Sbjct: 622 AMCKSGNLDKAVSLFGEMV--QRSILPDSFTYTSLISGLCRKGK 663



 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 150/574 (26%), Positives = 258/574 (44%), Gaps = 53/574 (9%)

Query: 20  KLSSLFKSPRQIAAVSSPETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFN 79
           K SS      + +  +      N  LH  CK G      A     +M     +  + ++N
Sbjct: 210 KKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKG--RFKAAIELLDHMNLKGVNADVCTYN 267

Query: 80  LLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWL 139
           +L   + ++          R +    + P+ +T N L+N F N       E ++  A  L
Sbjct: 268 MLIHDLCRSNRSAKGYLLLRDMRKRMIHPNEVTYNTLLNGFSN-------EGKVLIARQL 320

Query: 140 FKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSII 199
              M+ FG+ P+ +T+  LI+G    GN   AL++   M +     GLI      SY ++
Sbjct: 321 LNEMLTFGLSPNHVTFNALIDGHISEGNFKEALKMFHMMEA----KGLIGTE--VSYGVL 374

Query: 200 IDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGP 259
           +D LCK    D A+  ++ MK  G+    +  T +I G C  G  +E   +  EM   G 
Sbjct: 375 LDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVMLNEMSKDGI 434

Query: 260 RPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTARE 319
            P+++T++ +I+  C+ G++  A  ++  + + GL+P+   Y++L+   C +G +     
Sbjct: 435 DPDIVTYSALINGFCRVGRLKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKETIR 494

Query: 320 IFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLF 379
           I+ +M  +G      ++N+L+   CK   V EA    R + S+G+    ++++ L++G  
Sbjct: 495 IYEAMILEGNTPDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNAVSFDCLINGYG 554

Query: 380 QAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIE 439
            +G+   A  +FDEM      P   TY  L+ GLCK   +  A K    L+         
Sbjct: 555 SSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLIAAEKFLKSLQNVPAAVDTV 614

Query: 440 IFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGK----------- 488
           + N LI  +CK+G LD A  LF ++ Q+ ++P   TY+ +I GLCRKGK           
Sbjct: 615 MCNTLITAMCKSGNLDKAVSLFGEMVQRSILPDSFTYTSLISGLCRKGKTVIAILFAKEA 674

Query: 489 -------------------LEKAND------FLLYMEKNGCAPNVVTFNTLMHGFLQNNK 523
                              + KA        F   M+K G   +VVT N ++ G+ +  K
Sbjct: 675 EARGNLVPNKVMYTCFVDGMFKAGQWKAGFYFRQQMDKLGLTRDVVTTNAMIDGYSRMGK 734

Query: 524 TSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAK 557
             K  +LL +M    +N  P+ TT++I++   +K
Sbjct: 735 IEKTHDLLFEMG--NQNQGPNLTTYNILLHGYSK 766



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 110/358 (30%), Positives = 188/358 (52%), Gaps = 4/358 (1%)

Query: 196 YSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEML 255
           + I+I    +EG++  + E+F  M   G NP+V  C  ++     +     V     EML
Sbjct: 126 FDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSIVKSCEDVSVWSFLKEML 185

Query: 256 DLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRID 315
                P++ TFN++I+ LC  G   +++ L++ M + G  P   TYN+++  YC  GR  
Sbjct: 186 KRKICPDVATFNILINVLCAEGSFKKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFK 245

Query: 316 TAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLL 375
            A E+   M+ KG    V +YN+LI+  C+     +   L R +    +    +TYNTLL
Sbjct: 246 AAIELLDHMNLKGVNADVCTYNMLIHDLCRSNRSAKGYLLLRDMRKRMIHPNEVTYNTLL 305

Query: 376 SGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFE 435
           +G    G+   A++L +EM  + + P+  T+N LIDG       +EA+K+FHM+E  K  
Sbjct: 306 NGFSNEGKVLIARQLLNEMLTFGLSPNHVTFNALIDGHISEGNFKEALKMFHMMEA-KGL 364

Query: 436 FGIEI-FNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKAND 494
            G E+ +  L+DGLCK    D A   + ++ + G+    +TY+ MI GLC+ G L++A  
Sbjct: 365 IGTEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVV 424

Query: 495 FLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVV 552
            L  M K+G  P++VT++ L++GF +  +     E++ ++      L P+   +S ++
Sbjct: 425 MLNEMSKDGIDPDIVTYSALINGFCRVGRLKTAKEIVCRIYRV--GLSPNGIIYSTLI 480



 Score =  174 bits (442), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 112/424 (26%), Positives = 211/424 (49%), Gaps = 8/424 (1%)

Query: 130 ENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLIS 189
           E  I+++  +F+ M  +G  P V T   ++    ++          K+M+          
Sbjct: 136 EGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSIVKSCEDVSVWSFLKEMLKRKI------ 189

Query: 190 KTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNG 249
             ++ +++I+I+ LC EG   K+  L  +M+  G  P +V   T++H +C  G ++    
Sbjct: 190 CPDVATFNILINVLCAEGSFKKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIE 249

Query: 250 LFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYC 309
           L   M   G   ++ T+N++I  LC+  +  +   LL  M +R ++P+  TYN+L++G+ 
Sbjct: 250 LLDHMNLKGVNADVCTYNMLIHDLCRSNRSAKGYLLLRDMRKRMIHPNEVTYNTLLNGFS 309

Query: 310 LVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVI 369
             G++  AR++   M + G     V++N LI+G+    N +EA+ ++  + + G+  T +
Sbjct: 310 NEGKVLIARQLLNEMLTFGLSPNHVTFNALIDGHISEGNFKEALKMFHMMEAKGLIGTEV 369

Query: 370 TYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHML 429
           +Y  LL GL +  +   A+  +  MK   V     TY  +IDGLCKN  + EAV + + +
Sbjct: 370 SYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVMLNEM 429

Query: 430 EMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKL 489
             +  +  I  ++ LI+G C+ GRL  A E+  ++ + GL P  + YS +I+  CR G L
Sbjct: 430 SKDGIDPDIVTYSALINGFCRVGRLKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCL 489

Query: 490 EKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFS 549
           ++       M   G  P+  TFN L+    +  K ++  E +  M      ++P+  +F 
Sbjct: 490 KETIRIYEAMILEGNTPDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSD--GILPNAVSFD 547

Query: 550 IVVD 553
            +++
Sbjct: 548 CLIN 551



 Score =  169 bits (428), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 128/496 (25%), Positives = 221/496 (44%), Gaps = 51/496 (10%)

Query: 72  SPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVEN 131
           +P   +FN+L  ++ K         F R + S G+LP+ ++ + LIN +G+   GL    
Sbjct: 505 TPDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNAVSFDCLINGYGSSGEGL---- 560

Query: 132 RIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKT 191
              +A  +F  M   G  P   TYG+L+ G C+ G+L  A +  K +        + +  
Sbjct: 561 ---KAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLIAAEKFLKSL------QNVPAAV 611

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
           +    + +I ++CK G +DKA  LF EM  R I P     T+LI G C  G    +  LF
Sbjct: 612 DTVMCNTLITAMCKSGNLDKAVSLFGEMVQRSILPDSFTYTSLISGLCRKGK-TVIAILF 670

Query: 252 IEMLDLGPR--PNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYC 309
            +  +      PN + +   +D + K G+        + M + GL  D  T N+++DGY 
Sbjct: 671 AKEAEARGNLVPNKVMYTCFVDGMFKAGQWKAGFYFRQQMDKLGLTRDVVTTNAMIDGYS 730

Query: 310 LVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVI 369
            +G+I+   ++   M ++     + +YNIL++GY K  +V  +  LYR +I +G+    +
Sbjct: 731 RMGKIEKTHDLLFEMGNQNQGPNLTTYNILLHGYSKRKHVSTSFMLYRSMILSGILPDKL 790

Query: 370 TYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLC--------------- 414
           T  +++ G+ ++       K+        VE D  T+N+LI   C               
Sbjct: 791 TCYSIILGICESNMLEIGLKILKAFICRGVEVDRHTFNMLISKCCANGEINWAFDMVNVM 850

Query: 415 --------KNNC------------VQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRL 454
                   KN C             QE+  + H +           +  L++GLC+ G +
Sbjct: 851 TSLGISLDKNTCDAIVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLLNGLCRVGDI 910

Query: 455 DNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTL 514
             A+ +  ++    + P  V  S M+  L + GK ++A+  L  M K    P + +F TL
Sbjct: 911 KTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEASLLLRSMLKMKLVPTIASFTTL 970

Query: 515 MHGFLQNNKTSKVVEL 530
           MH F +N   ++ +EL
Sbjct: 971 MHLFCKNGNVTEALEL 986



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 109/457 (23%), Positives = 208/457 (45%), Gaps = 16/457 (3%)

Query: 42   NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
            N  +   CKSG  NL++A   FG M      P   ++  L   + +       I F ++ 
Sbjct: 617  NTLITAMCKSG--NLDKAVSLFGEMVQRSILPDSFTYTSLISGLCRKGKTVIAILFAKEA 674

Query: 102  VSIG-LLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLIN 160
             + G L+P+     ++  CF +   G+    + K   +  + M   G+  DV+T   +I+
Sbjct: 675  EARGNLVPN----KVMYTCFVD---GMFKAGQWKAGFYFRQQMDKLGLTRDVVTTNAMID 727

Query: 161  GFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMK 220
            G+ R G +     L  +M  G+   G     N+ +Y+I++    K   V  +  L+  M 
Sbjct: 728  GYSRMGKIEKTHDLLFEM--GNQNQG----PNLTTYNILLHGYSKRKHVSTSFMLYRSMI 781

Query: 221  GRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKIN 280
              GI P  + C ++I G C +   E    +    +  G   +  TFN++I   C  G+IN
Sbjct: 782  LSGILPDKLTCYSIILGICESNMLEIGLKILKAFICRGVEVDRHTFNMLISKCCANGEIN 841

Query: 281  EANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILI 340
             A  ++ +M   G++ D+ T ++++       R   +R +   M  +G       Y  L+
Sbjct: 842  WAFDMVNVMTSLGISLDKNTCDAIVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLL 901

Query: 341  NGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVE 400
            NG C++ +++ A  +  ++I++ +    +  + ++  L + G+A  A  L   M    + 
Sbjct: 902  NGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEASLLLRSMLKMKLV 961

Query: 401  PDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWEL 460
            P ++++  L+   CKN  V EA++L  ++     +  +  +N LI GLC  G +  A+EL
Sbjct: 962  PTIASFTTLMHLFCKNGNVTEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMAIAFEL 1021

Query: 461  FHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLL 497
            F ++ + G +  V TY  ++ G+  +G      D +L
Sbjct: 1022 FEEMKRDGFLANVTTYKALVGGILSQGTEFSGTDIIL 1058



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 65/225 (28%), Positives = 112/225 (49%), Gaps = 2/225 (0%)

Query: 329 CKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQ 388
           C      ++ILI  Y +   +++++ ++R +   G   +V T N +L  + ++ +     
Sbjct: 119 CNSNPSVFDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSIVKSCEDVSVW 178

Query: 389 KLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGL 448
               EM    + PD++T+NILI+ LC     +++  L   +E + +   I  +N ++   
Sbjct: 179 SFLKEMLKRKICPDVATFNILINVLCAEGSFKKSSYLMQKMEKSGYAPTIVTYNTVLHWY 238

Query: 449 CKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNV 508
           CK GR   A EL   +  KG+   V TY+++IH LCR  +  K    L  M K    PN 
Sbjct: 239 CKKGRFKAAIELLDHMNLKGVNADVCTYNMLIHDLCRSNRSAKGYLLLRDMRKRMIHPNE 298

Query: 509 VTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
           VT+NTL++GF    K     +LL++M      L P+  TF+ ++D
Sbjct: 299 VTYNTLLNGFSNEGKVLIARQLLNEML--TFGLSPNHVTFNALID 341



 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 63/270 (23%), Positives = 124/270 (45%), Gaps = 2/270 (0%)

Query: 292 RGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEE 351
           R  N +   ++ L+  Y   G I  + EIF  M   G   +V + N ++    K      
Sbjct: 117 RLCNSNPSVFDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSIVKSCEDVS 176

Query: 352 AMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILID 411
             S  ++++   +   V T+N L++ L   G    +  L  +M+     P + TYN ++ 
Sbjct: 177 VWSFLKEMLKRKICPDVATFNILINVLCAEGSFKKSSYLMQKMEKSGYAPTIVTYNTVLH 236

Query: 412 GLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVP 471
             CK    + A++L   + +      +  +N LI  LC++ R    + L   + ++ + P
Sbjct: 237 WYCKKGRFKAAIELLDHMNLKGVNADVCTYNMLIHDLCRSNRSAKGYLLLRDMRKRMIHP 296

Query: 472 TVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELL 531
             VTY+ +++G   +GK+  A   L  M   G +PN VTFN L+ G +      + +++ 
Sbjct: 297 NEVTYNTLLNGFSNEGKVLIARQLLNEMLTFGLSPNHVTFNALIDGHISEGNFKEALKMF 356

Query: 532 HKMAEPERNLVPDDTTFSIVVDLLAKDEKY 561
           H M    + L+  + ++ +++D L K+ ++
Sbjct: 357 HMM--EAKGLIGTEVSYGVLLDGLCKNAEF 384


>gi|356529971|ref|XP_003533559.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g19890-like [Glycine max]
          Length = 693

 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 125/474 (26%), Positives = 231/474 (48%), Gaps = 19/474 (4%)

Query: 101 LVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLIN 160
           ++  G + D  TL++++       R  C +  +  A W F+     G+RP++I +  +I 
Sbjct: 228 MIERGFVVDNATLSLIV-------REFCEKGFVTRALWYFRRFCEMGLRPNLINFTCMIE 280

Query: 161 GFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEM- 219
           G C+ G++  A  + ++MV   +      K N+++++ +ID LCK+G  +KA  LFL++ 
Sbjct: 281 GLCKRGSVKQAFEMLEEMVGRGW------KPNVYTHTALIDGLCKKGWTEKAFRLFLKLV 334

Query: 220 KGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKI 279
           +     P V+  T +I G+C          L   M + G  PN  T+  +ID  CK G  
Sbjct: 335 RSENHKPNVLTYTAMISGYCRDEKMNRAEMLLSRMKEQGLAPNTNTYTTLIDGHCKAGNF 394

Query: 280 NEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNIL 339
             A  L+ +M + G +P+  TYN+++DG C  GR+  A ++  S    G     V+Y IL
Sbjct: 395 ERAYELMNVMNEEGFSPNVCTYNAIVDGLCKKGRVQEAYKVLKSGFRNGLDADKVTYTIL 454

Query: 340 INGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNV 399
           I+ +CK   +++A+ L+ +++ +G++  + +Y TL++   +  +   ++  F+E   + +
Sbjct: 455 ISEHCKQAEIKQALVLFNKMVKSGIQPDIHSYTTLIAVFCREKRMKESEMFFEEAVRFGL 514

Query: 400 EPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWE 459
            P   TY  +I G C+   ++ A+K FH +  +        +  LI GLCK  +LD A  
Sbjct: 515 VPTNKTYTSMICGYCREGNLRLALKFFHRMSDHGCASDSITYGALISGLCKQSKLDEARC 574

Query: 460 LFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFL 519
           L+  + +KGL P  VT   + +  C   K++     ++ +E+      V T NTL+    
Sbjct: 575 LYDAMIEKGLTPCEVTRVTLAYEYC---KIDDGCSAMVVLERLEKKLWVRTVNTLVRKLC 631

Query: 520 QNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKSSYR 573
              K        HK+ + + N+  +  T +  +    +  KY   S +S   Y+
Sbjct: 632 SERKVGMAALFFHKLLDKDPNV--NRVTIAAFMTACYESNKYDLVSDLSARIYK 683



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 133/464 (28%), Positives = 225/464 (48%), Gaps = 45/464 (9%)

Query: 105 GLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCR 164
           GL P   TLN ++      E GL     ++ A  LF  M A GV+P+ ++Y  ++ G+C+
Sbjct: 162 GLAPSTKTLNWVVKIV--TEMGL-----VEYAENLFDEMCARGVQPNCVSYRVMVVGYCK 214

Query: 165 TGNLSVALRLHKKMVSGDY---------------ENGLISKT--------------NIFS 195
            GN+  + R    M+   +               E G +++               N+ +
Sbjct: 215 LGNVLESDRWLGGMIERGFVVDNATLSLIVREFCEKGFVTRALWYFRRFCEMGLRPNLIN 274

Query: 196 YSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEML 255
           ++ +I+ LCK G V +A E+  EM GRG  P V   T LI G C  G  E+   LF++++
Sbjct: 275 FTCMIEGLCKRGSVKQAFEMLEEMVGRGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLV 334

Query: 256 -DLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRI 314
                +PN+LT+  MI   C+  K+N A  LL  M ++GL P+  TY +L+DG+C  G  
Sbjct: 335 RSENHKPNVLTYTAMISGYCRDEKMNRAEMLLSRMKEQGLAPNTNTYTTLIDGHCKAGNF 394

Query: 315 DTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTL 374
           + A E+   M+ +G    V +YN +++G CK   V+EA  + +    NG+    +TY  L
Sbjct: 395 ERAYELMNVMNEEGFSPNVCTYNAIVDGLCKKGRVQEAYKVLKSGFRNGLDADKVTYTIL 454

Query: 375 LSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKF 434
           +S   +  +   A  LF++M    ++PD+ +Y  LI   C+   ++E+   F        
Sbjct: 455 ISEHCKQAEIKQALVLFNKMVKSGIQPDIHSYTTLIAVFCREKRMKESEMFFE----EAV 510

Query: 435 EFGI----EIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLE 490
            FG+    + +  +I G C+ G L  A + FH++   G     +TY  +I GLC++ KL+
Sbjct: 511 RFGLVPTNKTYTSMICGYCREGNLRLALKFFHRMSDHGCASDSITYGALISGLCKQSKLD 570

Query: 491 KANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKM 534
           +A      M + G  P  VT  TL + + + +     + +L ++
Sbjct: 571 EARCLYDAMIEKGLTPCEVTRVTLAYEYCKIDDGCSAMVVLERL 614



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 135/490 (27%), Positives = 225/490 (45%), Gaps = 33/490 (6%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CK G  N+ E+  + G M         ++ +L+     +       + ++R+   +GL P
Sbjct: 213 CKLG--NVLESDRWLGGMIERGFVVDNATLSLIVREFCEKGFVTRALWYFRRFCEMGLRP 270

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           + +    +I        GLC    +K+A  + + M+  G +P+V T+  LI+G C+ G  
Sbjct: 271 NLINFTCMIE-------GLCKRGSVKQAFEMLEEMVGRGWKPNVYTHTALIDGLCKKGWT 323

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
             A RL  K+V  +       K N+ +Y+ +I   C++  +++A+ L   MK +G+ P  
Sbjct: 324 EKAFRLFLKLVRSENH-----KPNVLTYTAMISGYCRDEKMNRAEMLLSRMKEQGLAPNT 378

Query: 229 VVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLEL 288
              TTLI G C AGN+E    L   M + G  PN+ T+N ++D LCK G++ EA  +L+ 
Sbjct: 379 NTYTTLIDGHCKAGNFERAYELMNVMNEEGFSPNVCTYNAIVDGLCKKGRVQEAYKVLKS 438

Query: 289 MIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILN 348
             + GL+ D+ TY  L+  +C    I  A  +F  M   G +  + SY  LI  +C+   
Sbjct: 439 GFRNGLDADKVTYTILISEHCKQAEIKQALVLFNKMVKSGIQPDIHSYTTLIAVFCREKR 498

Query: 349 VEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNI 408
           ++E+   + + +  G+  T  TY +++ G  + G    A K F  M  +    D  TY  
Sbjct: 499 MKESEMFFEEAVRFGLVPTNKTYTSMICGYCREGNLRLALKFFHRMSDHGCASDSITYGA 558

Query: 409 LIDGLCKNNCVQEAVKLFHML--------EMNKFEFGIEIFNCLIDGLCKAGRLDNAWEL 460
           LI GLCK + + EA  L+  +        E+ +     E   C ID  C      +A  +
Sbjct: 559 LISGLCKQSKLDEARCLYDAMIEKGLTPCEVTRVTLAYEY--CKIDDGC------SAMVV 610

Query: 461 FHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQ 520
             +L +K  V TV T   ++  LC + K+  A  F   +       N VT    M    +
Sbjct: 611 LERLEKKLWVRTVNT---LVRKLCSERKVGMAALFFHKLLDKDPNVNRVTIAAFMTACYE 667

Query: 521 NNKTSKVVEL 530
           +NK   V +L
Sbjct: 668 SNKYDLVSDL 677



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 95/366 (25%), Positives = 186/366 (50%), Gaps = 3/366 (0%)

Query: 199 IIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLG 258
           ++ S  + G V +A E+ +EM  +G+ P+      ++      G  E    LF EM   G
Sbjct: 138 MVKSFAEIGRVKEAIEMVIEMHNQGLAPSTKTLNWVVKIVTEMGLVEYAENLFDEMCARG 197

Query: 259 PRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAR 318
            +PN +++ VM+   CK G + E++  L  MI+RG   D  T + ++  +C  G +  A 
Sbjct: 198 VQPNCVSYRVMVVGYCKLGNVLESDRWLGGMIERGFVVDNATLSLIVREFCEKGFVTRAL 257

Query: 319 EIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGL 378
             F      G +  ++++  +I G CK  +V++A  +  +++  G +  V T+  L+ GL
Sbjct: 258 WYFRRFCEMGLRPNLINFTCMIEGLCKRGSVKQAFEMLEEMVGRGWKPNVYTHTALIDGL 317

Query: 379 FQAGQAGYAQKLFDEM-KLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFG 437
            + G    A +LF ++ +  N +P++ TY  +I G C++  +  A  L   ++       
Sbjct: 318 CKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCRDEKMNRAEMLLSRMKEQGLAPN 377

Query: 438 IEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLL 497
              +  LIDG CKAG  + A+EL + + ++G  P V TY+ ++ GLC+KG++++A   L 
Sbjct: 378 TNTYTTLIDGHCKAGNFERAYELMNVMNEEGFSPNVCTYNAIVDGLCKKGRVQEAYKVLK 437

Query: 498 YMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAK 557
              +NG   + VT+  L+    +  +  + + L +KM +    + PD  +++ ++ +  +
Sbjct: 438 SGFRNGLDADKVTYTILISEHCKQAEIKQALVLFNKMVKS--GIQPDIHSYTTLIAVFCR 495

Query: 558 DEKYHE 563
           +++  E
Sbjct: 496 EKRMKE 501



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 85/370 (22%), Positives = 179/370 (48%), Gaps = 4/370 (1%)

Query: 234 LIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRG 293
           ++  F   G  +E   + IEM + G  P+  T N ++  + + G +  A  L + M  RG
Sbjct: 138 MVKSFAEIGRVKEAIEMVIEMHNQGLAPSTKTLNWVVKIVTEMGLVEYAENLFDEMCARG 197

Query: 294 LNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAM 353
           + P+  +Y  ++ GYC +G +  +      M  +G      + ++++  +C+   V  A+
Sbjct: 198 VQPNCVSYRVMVVGYCKLGNVLESDRWLGGMIERGFVVDNATLSLIVREFCEKGFVTRAL 257

Query: 354 SLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGL 413
             +R+    G+R  +I +  ++ GL + G    A ++ +EM     +P++ T+  LIDGL
Sbjct: 258 WYFRRFCEMGLRPNLINFTCMIEGLCKRGSVKQAFEMLEEMVGRGWKPNVYTHTALIDGL 317

Query: 414 CKNNCVQEAVKLF-HMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPT 472
           CK    ++A +LF  ++     +  +  +  +I G C+  +++ A  L  ++ ++GL P 
Sbjct: 318 CKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCRDEKMNRAEMLLSRMKEQGLAPN 377

Query: 473 VVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLH 532
             TY+ +I G C+ G  E+A + +  M + G +PNV T+N ++ G  +  +  +  ++L 
Sbjct: 378 TNTYTTLIDGHCKAGNFERAYELMNVMNEEGFSPNVCTYNAIVDGLCKKGRVQEAYKVLK 437

Query: 533 KMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKSSYRACLYVTIFQPSSLGSMIGC 592
             +     L  D  T++I++    K  +  +   +     ++ +   I   ++L ++  C
Sbjct: 438 --SGFRNGLDADKVTYTILISEHCKQAEIKQALVLFNKMVKSGIQPDIHSYTTLIAVF-C 494

Query: 593 TVRLMPQPEM 602
             + M + EM
Sbjct: 495 REKRMKESEM 504



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 30/119 (25%), Positives = 56/119 (47%), Gaps = 2/119 (1%)

Query: 434 FEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKAN 493
           FE   E+  C++    + GR+  A E+  ++  +GL P+  T + ++  +   G +E A 
Sbjct: 128 FEKAHEVMQCMVKSFAEIGRVKEAIEMVIEMHNQGLAPSTKTLNWVVKIVTEMGLVEYAE 187

Query: 494 DFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVV 552
           +    M   G  PN V++  ++ G+ +     +    L  M   ER  V D+ T S++V
Sbjct: 188 NLFDEMCARGVQPNCVSYRVMVVGYCKLGNVLESDRWLGGMI--ERGFVVDNATLSLIV 244


>gi|449515696|ref|XP_004164884.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Cucumis sativus]
          Length = 657

 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 141/544 (25%), Positives = 245/544 (45%), Gaps = 72/544 (13%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
           PP  +F  +  A  K  +    +     +V+ G   +      L+       +G C++  
Sbjct: 108 PPEGTFTSVITACVKEGNVAEALRLKDDMVNCGKSMNLAVATSLM-------KGYCMQGN 160

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISK-- 190
           ++ A  L   +   G+ P+ +TY  LI+G C+ GN+  A   + +M +    + + S   
Sbjct: 161 LRSALVLVNEISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNS 220

Query: 191 --------------------------TNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGI 224
                                      N+F+++ ++  LCKEG +++A  L+ E+  +GI
Sbjct: 221 ILEGYLKCQSWQNAFTMFNDALESGLANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGI 280

Query: 225 NPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANG 284
           +P VV    +I G C   N      ++ EMLD G  PN +TF +++D   K G I  A  
Sbjct: 281 SPNVVSYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFS 340

Query: 285 LLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYC 344
           +   M    + P   T   ++ G C  GR    R++F    S+G   T + YN +I+G+ 
Sbjct: 341 IFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFI 400

Query: 345 KILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLS 404
           K  N+  A ++YR++   G+  + +TY +L+ G  +      A KL ++MK   ++ D+ 
Sbjct: 401 KEGNINLASNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIK 460

Query: 405 TYNILIDGLCKN-----------------------------------NCVQEAVKLFHML 429
            Y  LIDG CK                                    N V+EA+ L+  +
Sbjct: 461 AYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKM 520

Query: 430 EMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKL 489
                   ++ +  LIDGL K+GRL  A ++  ++  KG++P    ++++I+GLC KG+ 
Sbjct: 521 VNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQF 580

Query: 490 EKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFS 549
           E A   L  M      P+V+ +NTL+ G  +     +   L  +M   +R LVPD+ T+ 
Sbjct: 581 ENARKILEDMNGKNMIPSVLIYNTLIAGHFKEGNLQEAFRLHDEML--DRGLVPDNITYD 638

Query: 550 IVVD 553
           I+V+
Sbjct: 639 ILVN 642



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 134/469 (28%), Positives = 224/469 (47%), Gaps = 51/469 (10%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CK+G  N+ +A  F+  M        + S N +     K + +    + +   +  GL  
Sbjct: 191 CKNG--NIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFNDALESGL-A 247

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           +  T N L++        LC E ++ EA  L+  +IA G+ P+V++Y  +I G CR  N+
Sbjct: 248 NVFTFNTLLSW-------LCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNI 300

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
           + A +++K+M+    +NG     N  +++I++D   K+G ++ A  +F  MK   I P  
Sbjct: 301 NAACKVYKEML----DNGFTP--NAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTD 354

Query: 229 VVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLEL 288
                +I G C AG   E   LF + +  G  P  + +N +ID   K G IN A+ +   
Sbjct: 355 TTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYRE 414

Query: 289 MIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCK--- 345
           M + G+ P   TY SL+DG+C    ID A ++   M  KG K  + +Y  LI+G+CK   
Sbjct: 415 MCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRD 474

Query: 346 --------------------------------ILNVEEAMSLYRQIISNGVRQTVITYNT 373
                                           + NVEEA+ LY+++++ G+   + TY +
Sbjct: 475 MKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTS 534

Query: 374 LLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNK 433
           L+ GL ++G+  YA  +  EM    + PD   + +LI+GLC     + A K+   +    
Sbjct: 535 LIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFENARKILEDMNGKN 594

Query: 434 FEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHG 482
               + I+N LI G  K G L  A+ L  ++  +GLVP  +TY I+++G
Sbjct: 595 MIPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLDRGLVPDNITYDILVNG 643



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 150/588 (25%), Positives = 266/588 (45%), Gaps = 95/588 (16%)

Query: 72  SPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILIN-CF--GN------ 122
           +P I   N+L  A+ +          + K++ +G+  D  TL++++  C   GN      
Sbjct: 2   TPSIQCMNILLTAMVRKNMTCEARELHNKMLLVGVTGDCFTLHVMLRACLKEGNILEAEQ 61

Query: 123 -----KERG--------------LCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFC 163
                K RG              LC++     A  L + M A G  P   T+ ++I    
Sbjct: 62  HFLQAKARGVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGTFTSVITACV 121

Query: 164 RTGNLSVALRLHKKMVS--------------------GDYENGL-----ISKT----NIF 194
           + GN++ ALRL   MV+                    G+  + L     IS++    N  
Sbjct: 122 KEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISESGLVPNKV 181

Query: 195 SYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEM 254
           +YS++ID  CK G ++KA E + EMK +GI  +V    +++ G+    +W+    +F + 
Sbjct: 182 TYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFNDA 241

Query: 255 LDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRI 314
           L+ G   N+ TFN ++  LCK GK+NEA  L + +I +G++P+  +YN+++ G+C    I
Sbjct: 242 LESG-LANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNI 300

Query: 315 DTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMS-------------------- 354
           + A +++  M   G     V++ IL++GY K  ++E A S                    
Sbjct: 301 NAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGII 360

Query: 355 ---------------LYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNV 399
                          L+ + +S G   T + YNT++ G  + G    A  ++ EM    +
Sbjct: 361 IKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGI 420

Query: 400 EPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWE 459
            P   TY  LIDG CK N +  A+KL + ++    +  I+ +  LIDG CK   + +A E
Sbjct: 421 TPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHE 480

Query: 460 LFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFL 519
           L ++L   GL P    Y+ MI G      +E+A D    M   G   ++ T+ +L+ G L
Sbjct: 481 LLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLL 540

Query: 520 QNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAV 567
           ++ +     ++  +M    + ++PDD   +++++ L    ++     +
Sbjct: 541 KSGRLLYASDIHTEML--SKGILPDDRAHTVLINGLCNKGQFENARKI 586


>gi|357118215|ref|XP_003560853.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
           mitochondrial-like [Brachypodium distachyon]
          Length = 597

 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 133/494 (26%), Positives = 229/494 (46%), Gaps = 15/494 (3%)

Query: 50  KSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPD 109
           +S   + + AR+    +    P P  S+FN L  A+A+      +   +  +    + P+
Sbjct: 112 RSPSSSADAARFLRDSLAAGAPPPDTSAFNTLLDALAQAGDLPGMTQLFASMRDASVRPN 171

Query: 110 FLTLNILINCFGNKERGLCVENRIKEATWLFKNMIA--FGVRPDVITYGTLINGFCRTGN 167
            +T  IL+       +GLC   R+ +A  +   M      V PDV+    +++G C+TG 
Sbjct: 172 VVTYGILV-------KGLCKAGRVGDALSVLDGMSGPESDVCPDVVMLNNIVDGLCKTGR 224

Query: 168 LSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPA 227
           L  A++  ++ +   +        N  +Y+ +  + C+ G V  A EL  +M+   + P 
Sbjct: 225 LQQAVKFVEERMRSVHG----CAPNTVTYNCLAHAFCRAGNVGMACELVAKMEKERVTPN 280

Query: 228 VVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGP--RPNLLTFNVMIDCLCKGGKINEANGL 285
            V   T++ G C  G        F E   + P  R N +T++ ++        +  A  L
Sbjct: 281 AVTLNTIVGGLCWVGRVGAALEFFREKRTVWPEARGNAVTYSTLVGAFLHTNNVGVAMEL 340

Query: 286 LELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCK 345
              M+  G +PD   Y +++ G    GR+D A  +  SM   G +    +YNILI G+C+
Sbjct: 341 FHEMVDEGNSPDAIMYFTMISGLTQAGRLDDAWSMATSMKKAGFQLDAKAYNILIGGFCR 400

Query: 346 ILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLST 405
              + EA  L  ++   G++  V TYNTLLSGL +AG      +L  +M      P + T
Sbjct: 401 RKRLNEAYELLGEMKEAGLQPDVYTYNTLLSGLCKAGDFLAVDELLGKMIDGGCRPSVVT 460

Query: 406 YNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLP 465
           +  LI G CK   + EA+++F  ++ +  +    I+N LID LCK+     A ELF ++ 
Sbjct: 461 FGTLIHGYCKVGQIDEALRIFRSMDESGIQPNTVIYNTLIDFLCKSRDTSLAIELFDEMR 520

Query: 466 QKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTS 525
           +K +   V T++ ++ GL  K   EKA + +  M +  C P+ VT + LM       +T 
Sbjct: 521 EKHVPANVTTFNALLKGLRDKNMPEKAFELMDLMREGRCTPDYVTIDILMEWLPVIGETD 580

Query: 526 KVVELLHKMAEPER 539
           ++   +     P+R
Sbjct: 581 RLKHFMQHDTTPKR 594



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 76/271 (28%), Positives = 133/271 (49%), Gaps = 16/271 (5%)

Query: 315 DTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTL 374
           D AR +  S+ +        ++N L++   +  ++     L+  +    VR  V+TY  L
Sbjct: 119 DAARFLRDSLAAGAPPPDTSAFNTLLDALAQAGDLPGMTQLFASMRDASVRPNVVTYGIL 178

Query: 375 LSGLFQAGQAGYAQKLFDEMK--LYNVEPDLSTYNILIDGLCKNNCVQEAVKLF--HMLE 430
           + GL +AG+ G A  + D M     +V PD+   N ++DGLCK   +Q+AVK     M  
Sbjct: 179 VKGLCKAGRVGDALSVLDGMSGPESDVCPDVVMLNNIVDGLCKTGRLQQAVKFVEERMRS 238

Query: 431 MNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLE 490
           ++        +NCL    C+AG +  A EL  K+ ++ + P  VT + ++ GLC  G++ 
Sbjct: 239 VHGCAPNTVTYNCLAHAFCRAGNVGMACELVAKMEKERVTPNAVTLNTIVGGLCWVGRVG 298

Query: 491 KANDFLLYMEKNGCAP----NVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDT 546
            A +F  + EK    P    N VT++TL+  FL  N     +EL H+M + E N  PD  
Sbjct: 299 AALEF--FREKRTVWPEARGNAVTYSTLVGAFLHTNNVGVAMELFHEMVD-EGN-SPDAI 354

Query: 547 TFSIVVDLLAK----DEKYHECSAVSKSSYR 573
            +  ++  L +    D+ +   +++ K+ ++
Sbjct: 355 MYFTMISGLTQAGRLDDAWSMATSMKKAGFQ 385



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 54/176 (30%), Positives = 89/176 (50%), Gaps = 6/176 (3%)

Query: 381 AGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEI 440
           +  A  A+ L D +      PD S +N L+D L +   +    +LF  +        +  
Sbjct: 115 SSSADAARFLRDSLAAGAPPPDTSAFNTLLDALAQAGDLPGMTQLFASMRDASVRPNVVT 174

Query: 441 FNCLIDGLCKAGRLDNAWELFHKL--PQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLY 498
           +  L+ GLCKAGR+ +A  +   +  P+  + P VV  + ++ GLC+ G+L++A  F+  
Sbjct: 175 YGILVKGLCKAGRVGDALSVLDGMSGPESDVCPDVVMLNNIVDGLCKTGRLQQAVKFVEE 234

Query: 499 MEK--NGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVV 552
             +  +GCAPN VT+N L H F +        EL+ KM E ER + P+  T + +V
Sbjct: 235 RMRSVHGCAPNTVTYNCLAHAFCRAGNVGMACELVAKM-EKER-VTPNAVTLNTIV 288


>gi|12324355|gb|AAG52147.1|AC022355_8 hypothetical protein; 57683-56685 [Arabidopsis thaliana]
          Length = 332

 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 118/330 (35%), Positives = 179/330 (54%), Gaps = 20/330 (6%)

Query: 101 LVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLIN 160
           +V  G  PD +T   L+N       GLC E R+ +A  L   M+  G +P    YGT+IN
Sbjct: 1   MVETGCRPDVVTFTTLMN-------GLCCEGRVLQALALVDRMVEEGHQP----YGTIIN 49

Query: 161 GFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMK 220
           G C+ G+   AL L  KM     E   I K ++  Y+ IID LCK+G    A+ LF EM 
Sbjct: 50  GLCKMGDTESALNLLSKM-----EETHI-KAHVVIYNAIIDRLCKDGHHIHAQNLFTEMH 103

Query: 221 GRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKIN 280
            +GI P V+  + +I  FC +G W +   L  +M++    P+++TF+ +I+ L K GK++
Sbjct: 104 DKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVS 163

Query: 281 EANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILI 340
           EA  +   M++RG+ P   TYNS++DG+C   R++ A+ +  SM SK C   VV+++ LI
Sbjct: 164 EAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLI 223

Query: 341 NGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVE 400
           NGYCK   V+  M ++ ++   G+    +TY TL+ G  Q G    AQ L + M    V 
Sbjct: 224 NGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVA 283

Query: 401 PDLSTYNILIDGLCKNNCVQEAVKLFHMLE 430
           P+  T+  ++  LC     +E  K F +LE
Sbjct: 284 PNYITFQSMLASLCSK---KELRKAFAILE 310



 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 96/316 (30%), Positives = 165/316 (52%), Gaps = 4/316 (1%)

Query: 223 GINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEA 282
           G  P VV  TTL++G CC G   +   L   M++ G +P    +  +I+ LCK G    A
Sbjct: 5   GCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGDTESA 60

Query: 283 NGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILING 342
             LL  M +  +      YN+++D  C  G    A+ +F  MH KG    V++Y+ +I+ 
Sbjct: 61  LNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDS 120

Query: 343 YCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPD 402
           +C+     +A  L R +I   +   V+T++ L++ L + G+   A++++ +M    + P 
Sbjct: 121 FCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPT 180

Query: 403 LSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFH 462
             TYN +IDG CK + + +A ++   +        +  F+ LI+G CKA R+DN  E+F 
Sbjct: 181 TITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFC 240

Query: 463 KLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNN 522
           ++ ++G+V   VTY+ +IHG C+ G L+ A D L  M  +G APN +TF +++       
Sbjct: 241 EMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKK 300

Query: 523 KTSKVVELLHKMAEPE 538
           +  K   +L  + + E
Sbjct: 301 ELRKAFAILEDLQKSE 316



 Score = 86.3 bits (212), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 56/207 (27%), Positives = 99/207 (47%), Gaps = 6/207 (2%)

Query: 401 PDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWEL 460
           PD+ T+  L++GLC    V +A+ L   +     E G + +  +I+GLCK G  ++A  L
Sbjct: 8   PDVVTFTTLMNGLCCEGRVLQALALVDRM----VEEGHQPYGTIINGLCKMGDTESALNL 63

Query: 461 FHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQ 520
             K+ +  +   VV Y+ +I  LC+ G    A +    M   G  P+V+T++ ++  F +
Sbjct: 64  LSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCR 123

Query: 521 NNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKSSYRACLYVTI 580
           + + +   +LL  M   ER + PD  TFS +++ L K+ K  E   +     R  ++ T 
Sbjct: 124 SGRWTDAEQLLRDMI--ERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTT 181

Query: 581 FQPSSLGSMIGCTVRLMPQPEMSDTLG 607
              +S+        RL     M D++ 
Sbjct: 182 ITYNSMIDGFCKQDRLNDAKRMLDSMA 208



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 42/174 (24%), Positives = 73/174 (41%), Gaps = 13/174 (7%)

Query: 56  LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNI 115
           ++EA   +G M      P   ++N +     K    +        + S    PD +T + 
Sbjct: 162 VSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFST 221

Query: 116 LINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLH 175
           LIN       G C   R+     +F  M   G+  + +TY TLI+GFC+ G+L  A  L 
Sbjct: 222 LIN-------GYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLL 274

Query: 176 KKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVV 229
             M+S           N  ++  ++ SLC +  + KA  +  +++   + P +V
Sbjct: 275 NVMISSGV------APNYITFQSMLASLCSKKELRKAFAILEDLQKSEVCPRIV 322



 Score = 40.8 bits (94), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 25/93 (26%), Positives = 49/93 (52%), Gaps = 6/93 (6%)

Query: 466 QKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTS 525
           + G  P VVT++ +++GLC +G++ +A   +  M + G  P    + T+++G  +   T 
Sbjct: 3   ETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGDTE 58

Query: 526 KVVELLHKMAEPERNLVPDDTTFSIVVDLLAKD 558
             + LL KM E   ++      ++ ++D L KD
Sbjct: 59  SALNLLSKMEET--HIKAHVVIYNAIIDRLCKD 89


>gi|357441365|ref|XP_003590960.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355480008|gb|AES61211.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 590

 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 135/490 (27%), Positives = 232/490 (47%), Gaps = 44/490 (8%)

Query: 38  ETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISF 97
           +T   + L+ +CKS     +E+ YF  +M +    P +     L       +  +  I  
Sbjct: 77  DTNFMKTLNRSCKSA--KYDESLYFLQHMVNRGYKPDVILCTKLIKGFFNMKKIEKAIQV 134

Query: 98  YRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGT 157
              L   G  PD    N +I+       G C  +R+  A+ +   M   G  PDV+TY  
Sbjct: 135 MEILEKHGK-PDVFAYNAVIS-------GFCKADRVDHASKVLDRMKKRGFEPDVVTYNI 186

Query: 158 LINGFCRTGNLSVALRLHKKMVSGDYENGLISKT-------------------------- 191
           LI  FC  G L +ALR+  +++  + +  +I+ T                          
Sbjct: 187 LIGNFCGRGRLDLALRVMDQLLKDNCKPTVITYTILIEATITQGGIDEAMKLLDEMLSRG 246

Query: 192 ---NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVN 248
              + ++Y+++++ +CKEG++D+A E    +   G    V     L+      G WE   
Sbjct: 247 LRPDRYTYNVVVNGMCKEGMLDRAFEFLSRISKNGCVAGVSTYNILLRDLLNEGKWEYGE 306

Query: 249 GLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGY 308
            L  +ML  G  PN +T++ +I  LC+ GKI+EA  +L++M ++ L PD ++Y+ L+   
Sbjct: 307 KLMSDMLVKGCEPNPITYSTLITALCRDGKIDEAKNVLKVMKEKALAPDGYSYDPLISAL 366

Query: 309 CLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTV 368
           C  G++D A E    M S G    ++SYN ++   CK  N +EA++++ ++   G     
Sbjct: 367 CREGKVDLAIEFLDDMISGGHLPDILSYNSILASLCKNGNADEALNIFEKLGEVGCPPNA 426

Query: 369 ITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLF-H 427
            +YNTL   L+ +G    A  +  EM    ++PD  TYN LI  LC++  V +A++L   
Sbjct: 427 GSYNTLFGALWSSGDKIRALGMILEMLSNGIDPDEITYNSLISCLCRDGLVDQAIELLVD 486

Query: 428 MLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGL---- 483
           M E  K +  +  +N ++ GLCK  R+ +A E+   +  +G +P   TY+++I G+    
Sbjct: 487 MFESEKCQPTVISYNTVLLGLCKVQRIIDAIEVLAAMVNEGCLPNETTYTLLIQGIGFAG 546

Query: 484 CRKGKLEKAN 493
            R   +E AN
Sbjct: 547 WRYDAMELAN 556



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 120/412 (29%), Positives = 198/412 (48%), Gaps = 7/412 (1%)

Query: 128 CVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGL 187
           C   +  E+ +  ++M+  G +PDVI    LI GF     +  A+++ + +         
Sbjct: 88  CKSAKYDESLYFLQHMVNRGYKPDVILCTKLIKGFFNMKKIEKAIQVMEILEKH------ 141

Query: 188 ISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEV 247
             K ++F+Y+ +I   CK   VD A ++   MK RG  P VV    LI  FC  G  +  
Sbjct: 142 -GKPDVFAYNAVISGFCKADRVDHASKVLDRMKKRGFEPDVVTYNILIGNFCGRGRLDLA 200

Query: 248 NGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDG 307
             +  ++L    +P ++T+ ++I+     G I+EA  LL+ M+ RGL PDR+TYN +++G
Sbjct: 201 LRVMDQLLKDNCKPTVITYTILIEATITQGGIDEAMKLLDEMLSRGLRPDRYTYNVVVNG 260

Query: 308 YCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQT 367
            C  G +D A E    +   GC   V +YNIL+         E    L   ++  G    
Sbjct: 261 MCKEGMLDRAFEFLSRISKNGCVAGVSTYNILLRDLLNEGKWEYGEKLMSDMLVKGCEPN 320

Query: 368 VITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFH 427
            ITY+TL++ L + G+   A+ +   MK   + PD  +Y+ LI  LC+   V  A++   
Sbjct: 321 PITYSTLITALCRDGKIDEAKNVLKVMKEKALAPDGYSYDPLISALCREGKVDLAIEFLD 380

Query: 428 MLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKG 487
            +        I  +N ++  LCK G  D A  +F KL + G  P   +Y+ +   L   G
Sbjct: 381 DMISGGHLPDILSYNSILASLCKNGNADEALNIFEKLGEVGCPPNAGSYNTLFGALWSSG 440

Query: 488 KLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPER 539
              +A   +L M  NG  P+ +T+N+L+    ++    + +ELL  M E E+
Sbjct: 441 DKIRALGMILEMLSNGIDPDEITYNSLISCLCRDGLVDQAIELLVDMFESEK 492



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 103/373 (27%), Positives = 174/373 (46%), Gaps = 33/373 (8%)

Query: 41  LNEFLHENCKSGIIN-------------LNEARYFFGYMTHMQPSPPISSFNLLFGAVAK 87
           +++ L +NCK  +I              ++EA      M      P   ++N++   + K
Sbjct: 204 MDQLLKDNCKPTVITYTILIEATITQGGIDEAMKLLDEMLSRGLRPDRYTYNVVVNGMCK 263

Query: 88  NRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFG 147
               D    F  ++   G +    T NIL+       R L  E + +    L  +M+  G
Sbjct: 264 EGMLDRAFEFLSRISKNGCVAGVSTYNILL-------RDLLNEGKWEYGEKLMSDMLVKG 316

Query: 148 VRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEG 207
             P+ ITY TLI   CR G +  A  + K M     E  L    + +SY  +I +LC+EG
Sbjct: 317 CEPNPITYSTLITALCRDGKIDEAKNVLKVM----KEKAL--APDGYSYDPLISALCREG 370

Query: 208 LVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFN 267
            VD A E   +M   G  P ++   +++   C  GN +E   +F ++ ++G  PN  ++N
Sbjct: 371 KVDLAIEFLDDMISGGHLPDILSYNSILASLCKNGNADEALNIFEKLGEVGCPPNAGSYN 430

Query: 268 VMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSM-HS 326
            +   L   G    A G++  M+  G++PD  TYNSL+   C  G +D A E+ + M  S
Sbjct: 431 TLFGALWSSGDKIRALGMILEMLSNGIDPDEITYNSLISCLCRDGLVDQAIELLVDMFES 490

Query: 327 KGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGY 386
           + C+ TV+SYN ++ G CK+  + +A+ +   +++ G      TY  L+ G+      G+
Sbjct: 491 EKCQPTVISYNTVLLGLCKVQRIIDAIEVLAAMVNEGCLPNETTYTLLIQGI------GF 544

Query: 387 AQKLFDEMKLYNV 399
           A   +D M+L N+
Sbjct: 545 AGWRYDAMELANL 557



 Score = 86.7 bits (213), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 54/193 (27%), Positives = 103/193 (53%), Gaps = 9/193 (4%)

Query: 384 AGYAQKLFDEMKLYN--VEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIF 441
           A Y + L+    + N   +PD+     LI G      +++A+++  +LE +  +  +  +
Sbjct: 91  AKYDESLYFLQHMVNRGYKPDVILCTKLIKGFFNMKKIEKAIQVMEILEKHG-KPDVFAY 149

Query: 442 NCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEK 501
           N +I G CKA R+D+A ++  ++ ++G  P VVTY+I+I   C +G+L+ A   +  + K
Sbjct: 150 NAVISGFCKADRVDHASKVLDRMKKRGFEPDVVTYNILIGNFCGRGRLDLALRVMDQLLK 209

Query: 502 NGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAK---- 557
           + C P V+T+  L+   +      + ++LL +M    R L PD  T+++VV+ + K    
Sbjct: 210 DNCKPTVITYTILIEATITQGGIDEAMKLLDEMLS--RGLRPDRYTYNVVVNGMCKEGML 267

Query: 558 DEKYHECSAVSKS 570
           D  +   S +SK+
Sbjct: 268 DRAFEFLSRISKN 280



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 71/276 (25%), Positives = 124/276 (44%), Gaps = 20/276 (7%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           C+ G I+  EA+     M     +P   S++ L  A+ +    D  I F   ++S G LP
Sbjct: 332 CRDGKID--EAKNVLKVMKEKALAPDGYSYDPLISALCREGKVDLAIEFLDDMISGGHLP 389

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           D L+ N ++         LC      EA  +F+ +   G  P+  +Y TL      +G+ 
Sbjct: 390 DILSYNSIL-------ASLCKNGNADEALNIFEKLGEVGCPPNAGSYNTLFGALWSSGDK 442

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEM-KGRGINPA 227
             AL +  +M+S    NG+    +  +Y+ +I  LC++GLVD+A EL ++M +     P 
Sbjct: 443 IRALGMILEMLS----NGI--DPDEITYNSLISCLCRDGLVDQAIELLVDMFESEKCQPT 496

Query: 228 VVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLE 287
           V+   T++ G C      +   +   M++ G  PN  T+ ++I  +   G   +A  L  
Sbjct: 497 VISYNTVLLGLCKVQRIIDAIEVLAAMVNEGCLPNETTYTLLIQGIGFAGWRYDAMELAN 556

Query: 288 LMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLS 323
           L++    N D  + +S      +    D  +E+ LS
Sbjct: 557 LLV----NMDAISEDSFKRFQKIFPVFDAHKELALS 588



 Score = 52.8 bits (125), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 27/104 (25%), Positives = 54/104 (51%), Gaps = 3/104 (2%)

Query: 449 CKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNV 508
           CK+ + D +      +  +G  P V+  + +I G     K+EKA   +  +EK+G  P+V
Sbjct: 88  CKSAKYDESLYFLQHMVNRGYKPDVILCTKLIKGFFNMKKIEKAIQVMEILEKHG-KPDV 146

Query: 509 VTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVV 552
             +N ++ GF + ++     ++L +M   +R   PD  T++I++
Sbjct: 147 FAYNAVISGFCKADRVDHASKVLDRMK--KRGFEPDVVTYNILI 188



 Score = 45.4 bits (106), Expect = 0.082,   Method: Compositional matrix adjust.
 Identities = 44/170 (25%), Positives = 66/170 (38%), Gaps = 31/170 (18%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
           N  L   CK+G  N +EA   F  +  +   P   S+N LFGA+  +      +    ++
Sbjct: 395 NSILASLCKNG--NADEALNIFEKLGEVGCPPNAGSYNTLFGALWSSGDKIRALGMILEM 452

Query: 102 VSIGLLPDFLTLNILINC-----------------------------FGNKERGLCVENR 132
           +S G+ PD +T N LI+C                             +     GLC   R
Sbjct: 453 LSNGIDPDEITYNSLISCLCRDGLVDQAIELLVDMFESEKCQPTVISYNTVLLGLCKVQR 512

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGD 182
           I +A  +   M+  G  P+  TY  LI G    G    A+ L   +V+ D
Sbjct: 513 IIDAIEVLAAMVNEGCLPNETTYTLLIQGIGFAGWRYDAMELANLLVNMD 562


>gi|224107129|ref|XP_002314384.1| predicted protein [Populus trichocarpa]
 gi|222863424|gb|EEF00555.1| predicted protein [Populus trichocarpa]
          Length = 764

 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 147/566 (25%), Positives = 265/566 (46%), Gaps = 60/566 (10%)

Query: 55  NLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLN 114
            L EA      M H +  P  S++  L GA+++    D +++ + ++  +G   +   L 
Sbjct: 41  KLIEAFDLLQMMRHFKFRPAFSAYTTLIGALSEVGESDRMLALFNQMQELGYEVNVHLLT 100

Query: 115 ILINCFGNKER-----------------------GLCVE-----NRIKEATWLFKNMIAF 146
            LI  F  + R                        +C++      ++  A   F  M A 
Sbjct: 101 TLIRVFSREGRVDAALSLLDEMKSNTFDADIVLYNVCIDCFGKVGKVDMAWKFFHEMKAN 160

Query: 147 GVRPDVITYGTLINGFCRTGNLSVALRLHKKM--------------------VSGDYENG 186
           G+ PD +TY +++   C+   L  A+ + ++M                     +G ++  
Sbjct: 161 GLVPDDVTYTSMMGVLCKANRLDEAVEIFEQMEQNRQVPCAYAYNTMIMGYGSAGKFDEA 220

Query: 187 --LISKT-------NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHG 237
             L+ +        ++ +Y+ I+  L K+G  DKA  +F EMK R   P +     +I  
Sbjct: 221 YSLLERQRAKGCIPSVVAYNCILTCLGKKGKTDKALRIFEEMK-RDAMPNLPTYNIIIGM 279

Query: 238 FCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPD 297
            C AGN E    +   M + G  PN+ T N+MID LCK  K++EA  + E M  +  +PD
Sbjct: 280 LCKAGNVEAAFKVRDAMKEAGLFPNVRTINIMIDRLCKAQKLDEACSIFEGMDYKVCSPD 339

Query: 298 RFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYR 357
             T+ SL+DG    GR+D A  I+  M        VV Y  LI  + K    E+   +Y+
Sbjct: 340 GATFCSLIDGLGKQGRVDDAYRIYERMLDADQIPNVVVYTSLIRNFFKCDRKEDGHKMYK 399

Query: 358 QIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNN 417
           +++ +G    ++  NT +  +F+AG+    + LF+E+K     PD  +Y+ILI  L K  
Sbjct: 400 EMMRSGCSPDLMLLNTYMDCVFKAGETEKGRALFEEIKARGFLPDTRSYSILIHSLVKAG 459

Query: 418 CVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYS 477
             +E  +L++ ++          +N +IDG CK+G+++ A++L  ++   G  PTVVTY 
Sbjct: 460 FARETYELYYAMKDQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTMGHHPTVVTYG 519

Query: 478 IMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEP 537
            ++ GL +  +L++A       + NG   N V +++L+ GF +  +  +   ++ +M   
Sbjct: 520 SVVDGLAKIDRLDEAYMLFEEAKSNGIELNQVIYSSLIDGFGKVGRVDEAYLVMEEMM-- 577

Query: 538 ERNLVPDDTTFSIVVDLLAKDEKYHE 563
           ++ L P+  T++ ++D L K E+ +E
Sbjct: 578 QKGLTPNVYTWNCLLDGLVKAEEINE 603



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 140/543 (25%), Positives = 239/543 (44%), Gaps = 53/543 (9%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CK+    L+EA   F  M   +  P   ++N +         +D   S   +  + G +P
Sbjct: 177 CKAN--RLDEAVEIFEQMEQNRQVPCAYAYNTMIMGYGSAGKFDEAYSLLERQRAKGCIP 234

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
             +  N ++ C G K        +  +A  +F+ M      P++ TY  +I   C+ GN+
Sbjct: 235 SVVAYNCILTCLGKK-------GKTDKALRIFEEM-KRDAMPNLPTYNIIIGMLCKAGNV 286

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCK----------------------- 205
             A ++   M     E GL    N+ + +I+ID LCK                       
Sbjct: 287 EAAFKVRDAM----KEAGLFP--NVRTINIMIDRLCKAQKLDEACSIFEGMDYKVCSPDG 340

Query: 206 ------------EGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIE 253
                       +G VD A  ++  M      P VVV T+LI  F      E+ + ++ E
Sbjct: 341 ATFCSLIDGLGKQGRVDDAYRIYERMLDADQIPNVVVYTSLIRNFFKCDRKEDGHKMYKE 400

Query: 254 MLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGR 313
           M+  G  P+L+  N  +DC+ K G+  +   L E +  RG  PD  +Y+ L+      G 
Sbjct: 401 MMRSGCSPDLMLLNTYMDCVFKAGETEKGRALFEEIKARGFLPDTRSYSILIHSLVKAGF 460

Query: 314 IDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNT 373
                E++ +M  +GC     +YN +I+G+CK   V +A  L  ++ + G   TV+TY +
Sbjct: 461 ARETYELYYAMKDQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTMGHHPTVVTYGS 520

Query: 374 LLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNK 433
           ++ GL +  +   A  LF+E K   +E +   Y+ LIDG  K   V EA  +   +    
Sbjct: 521 VVDGLAKIDRLDEAYMLFEEAKSNGIELNQVIYSSLIDGFGKVGRVDEAYLVMEEMMQKG 580

Query: 434 FEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKAN 493
               +  +NCL+DGL KA  ++ A   F  +      P  +TY I+I+GLC+  K  KA 
Sbjct: 581 LTPNVYTWNCLLDGLVKAEEINEALVCFQSMKDLKCTPNQITYCILINGLCKVRKFNKAF 640

Query: 494 DFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
            F   M+K G  PN +T+  ++ G  ++   ++   L  +        +PD  +++ +++
Sbjct: 641 VFWQEMQKQGLKPNTITYTAMISGLAKSGNVAQASSLFERFRAS--GGIPDSASYNAMIE 698

Query: 554 LLA 556
            L+
Sbjct: 699 GLS 701



 Score =  202 bits (513), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 120/461 (26%), Positives = 230/461 (49%), Gaps = 13/461 (2%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
           P + ++N++ G + K  + +A       +   GL P+  T+NI+I+        LC   +
Sbjct: 268 PNLPTYNIIIGMLCKAGNVEAAFKVRDAMKEAGLFPNVRTINIMID-------RLCKAQK 320

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
           + EA  +F+ M      PD  T+ +LI+G  + G +  A R++++M+  D         N
Sbjct: 321 LDEACSIFEGMDYKVCSPDGATFCSLIDGLGKQGRVDDAYRIYERMLDAD------QIPN 374

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
           +  Y+ +I +  K    +   +++ EM   G +P +++  T +     AG  E+   LF 
Sbjct: 375 VVVYTSLIRNFFKCDRKEDGHKMYKEMMRSGCSPDLMLLNTYMDCVFKAGETEKGRALFE 434

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
           E+   G  P+  +++++I  L K G   E   L   M  +G   D   YN+++DG+C  G
Sbjct: 435 EIKARGFLPDTRSYSILIHSLVKAGFARETYELYYAMKDQGCVLDTRAYNTVIDGFCKSG 494

Query: 313 RIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYN 372
           +++ A ++   M + G   TVV+Y  +++G  KI  ++EA  L+ +  SNG+    + Y+
Sbjct: 495 KVNKAYQLLEEMKTMGHHPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSNGIELNQVIYS 554

Query: 373 TLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMN 432
           +L+ G  + G+   A  + +EM    + P++ T+N L+DGL K   + EA+  F  ++  
Sbjct: 555 SLIDGFGKVGRVDEAYLVMEEMMQKGLTPNVYTWNCLLDGLVKAEEINEALVCFQSMKDL 614

Query: 433 KFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKA 492
           K       +  LI+GLCK  + + A+  + ++ ++GL P  +TY+ MI GL + G + +A
Sbjct: 615 KCTPNQITYCILINGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTAMISGLAKSGNVAQA 674

Query: 493 NDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHK 533
           +        +G  P+  ++N ++ G    N+     +L  +
Sbjct: 675 SSLFERFRASGGIPDSASYNAMIEGLSIANRALDAYQLFEE 715



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 124/431 (28%), Positives = 206/431 (47%), Gaps = 10/431 (2%)

Query: 128 CVENR-IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENG 186
           CV++R + EA  L + M  F  RP    Y TLI      G     L L  +M    YE  
Sbjct: 36  CVKSRKLIEAFDLLQMMRHFKFRPAFSAYTTLIGALSEVGESDRMLALFNQMQELGYE-- 93

Query: 187 LISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEE 246
                N+   + +I    +EG VD A  L  EMK    +  +V+    I  F   G  + 
Sbjct: 94  ----VNVHLLTTLIRVFSREGRVDAALSLLDEMKSNTFDADIVLYNVCIDCFGKVGKVDM 149

Query: 247 VNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMD 306
               F EM   G  P+ +T+  M+  LCK  +++EA  + E M Q    P  + YN+++ 
Sbjct: 150 AWKFFHEMKANGLVPDDVTYTSMMGVLCKANRLDEAVEIFEQMEQNRQVPCAYAYNTMIM 209

Query: 307 GYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQ 366
           GY   G+ D A  +     +KGC  +VV+YN ++    K    ++A+ ++ ++  + +  
Sbjct: 210 GYGSAGKFDEAYSLLERQRAKGCIPSVVAYNCILTCLGKKGKTDKALRIFEEMKRDAM-P 268

Query: 367 TVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLF 426
            + TYN ++  L +AG    A K+ D MK   + P++ T NI+ID LCK   + EA  +F
Sbjct: 269 NLPTYNIIIGMLCKAGNVEAAFKVRDAMKEAGLFPNVRTINIMIDRLCKAQKLDEACSIF 328

Query: 427 HMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRK 486
             ++          F  LIDGL K GR+D+A+ ++ ++     +P VV Y+ +I    + 
Sbjct: 329 EGMDYKVCSPDGATFCSLIDGLGKQGRVDDAYRIYERMLDADQIPNVVVYTSLIRNFFKC 388

Query: 487 GKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDT 546
            + E  +     M ++GC+P+++  NT M    +  +T K   L  ++    R  +PD  
Sbjct: 389 DRKEDGHKMYKEMMRSGCSPDLMLLNTYMDCVFKAGETEKGRALFEEI--KARGFLPDTR 446

Query: 547 TFSIVVDLLAK 557
           ++SI++  L K
Sbjct: 447 SYSILIHSLVK 457



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 109/363 (30%), Positives = 177/363 (48%), Gaps = 19/363 (5%)

Query: 98  YRKLVSIGLLPDFLTLNILINCF---GNKERGLCVENRIKEATWLFKNMIAFGVRPDVIT 154
           Y++++  G  PD + LN  ++C    G  E+G            LF+ + A G  PD  +
Sbjct: 398 YKEMMRSGCSPDLMLLNTYMDCVFKAGETEKGRA----------LFEEIKARGFLPDTRS 447

Query: 155 YGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKE 214
           Y  LI+   + G       L+  M     + G +  T   +Y+ +ID  CK G V+KA +
Sbjct: 448 YSILIHSLVKAGFARETYELYYAM----KDQGCVLDTR--AYNTVIDGFCKSGKVNKAYQ 501

Query: 215 LFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLC 274
           L  EMK  G +P VV   +++ G       +E   LF E    G   N + ++ +ID   
Sbjct: 502 LLEEMKTMGHHPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSNGIELNQVIYSSLIDGFG 561

Query: 275 KGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVV 334
           K G+++EA  ++E M+Q+GL P+ +T+N L+DG      I+ A   F SM    C    +
Sbjct: 562 KVGRVDEAYLVMEEMMQKGLTPNVYTWNCLLDGLVKAEEINEALVCFQSMKDLKCTPNQI 621

Query: 335 SYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEM 394
           +Y ILING CK+    +A   ++++   G++   ITY  ++SGL ++G    A  LF+  
Sbjct: 622 TYCILINGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTAMISGLAKSGNVAQASSLFERF 681

Query: 395 KLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRL 454
           +     PD ++YN +I+GL   N   +A +LF    +       +    L+D L KA  L
Sbjct: 682 RASGGIPDSASYNAMIEGLSIANRALDAYQLFEETRLKGCSIHTKTCVALLDALHKAECL 741

Query: 455 DNA 457
           + A
Sbjct: 742 EQA 744



 Score =  135 bits (341), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 88/354 (24%), Positives = 168/354 (47%), Gaps = 3/354 (0%)

Query: 199 IIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLG 258
           ++ S  K   + +A +L   M+     PA    TTLI      G  + +  LF +M +LG
Sbjct: 32  LVASCVKSRKLIEAFDLLQMMRHFKFRPAFSAYTTLIGALSEVGESDRMLALFNQMQELG 91

Query: 259 PRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAR 318
              N+     +I    + G+++ A  LL+ M     + D   YN  +D +  VG++D A 
Sbjct: 92  YEVNVHLLTTLIRVFSREGRVDAALSLLDEMKSNTFDADIVLYNVCIDCFGKVGKVDMAW 151

Query: 319 EIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGL 378
           + F  M + G     V+Y  ++   CK   ++EA+ ++ Q+  N        YNT++ G 
Sbjct: 152 KFFHEMKANGLVPDDVTYTSMMGVLCKANRLDEAVEIFEQMEQNRQVPCAYAYNTMIMGY 211

Query: 379 FQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGI 438
             AG+   A  L +  +     P +  YN ++  L K     +A+++F  ++ +     +
Sbjct: 212 GSAGKFDEAYSLLERQRAKGCIPSVVAYNCILTCLGKKGKTDKALRIFEEMKRDAMP-NL 270

Query: 439 EIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLY 498
             +N +I  LCKAG ++ A+++   + + GL P V T +IMI  LC+  KL++A      
Sbjct: 271 PTYNIIIGMLCKAGNVEAAFKVRDAMKEAGLFPNVRTINIMIDRLCKAQKLDEACSIFEG 330

Query: 499 MEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVV 552
           M+   C+P+  TF +L+ G  +  +      +  +M + ++  +P+   ++ ++
Sbjct: 331 MDYKVCSPDGATFCSLIDGLGKQGRVDDAYRIYERMLDADQ--IPNVVVYTSLI 382



 Score =  129 bits (324), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 94/334 (28%), Positives = 154/334 (46%), Gaps = 4/334 (1%)

Query: 243 NWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYN 302
           N++ +  +  EM   G  P   T   ++    K  K+ EA  LL++M      P    Y 
Sbjct: 6   NFDYLEQILGEMSIAGFGPTNYTCVELVASCVKSRKLIEAFDLLQMMRHFKFRPAFSAYT 65

Query: 303 SLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISN 362
           +L+     VG  D    +F  M   G +  V     LI  + +   V+ A+SL  ++ SN
Sbjct: 66  TLIGALSEVGESDRMLALFNQMQELGYEVNVHLLTTLIRVFSREGRVDAALSLLDEMKSN 125

Query: 363 GVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEA 422
                ++ YN  +    + G+   A K F EMK   + PD  TY  ++  LCK N + EA
Sbjct: 126 TFDADIVLYNVCIDCFGKVGKVDMAWKFFHEMKANGLVPDDVTYTSMMGVLCKANRLDEA 185

Query: 423 VKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHG 482
           V++F  +E N+       +N +I G   AG+ D A+ L  +   KG +P+VV Y+ ++  
Sbjct: 186 VEIFEQMEQNRQVPCAYAYNTMIMGYGSAGKFDEAYSLLERQRAKGCIPSVVAYNCILTC 245

Query: 483 LCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLV 542
           L +KGK +KA      M+++   PN+ T+N ++    +        ++   M E    L 
Sbjct: 246 LGKKGKTDKALRIFEEMKRDA-MPNLPTYNIIIGMLCKAGNVEAAFKVRDAMKEA--GLF 302

Query: 543 PDDTTFSIVVDLLAKDEKYHE-CSAVSKSSYRAC 575
           P+  T +I++D L K +K  E CS      Y+ C
Sbjct: 303 PNVRTINIMIDRLCKAQKLDEACSIFEGMDYKVC 336


>gi|42562903|ref|NP_176512.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|114050643|gb|ABI49471.1| At1g63230 [Arabidopsis thaliana]
 gi|332195952|gb|AEE34073.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 323

 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 118/330 (35%), Positives = 179/330 (54%), Gaps = 20/330 (6%)

Query: 101 LVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLIN 160
           +V  G  PD +T   L+N       GLC E R+ +A  L   M+  G +P    YGT+IN
Sbjct: 1   MVETGCRPDVVTFTTLMN-------GLCCEGRVLQALALVDRMVEEGHQP----YGTIIN 49

Query: 161 GFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMK 220
           G C+ G+   AL L  KM     E   I K ++  Y+ IID LCK+G    A+ LF EM 
Sbjct: 50  GLCKMGDTESALNLLSKM-----EETHI-KAHVVIYNAIIDRLCKDGHHIHAQNLFTEMH 103

Query: 221 GRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKIN 280
            +GI P V+  + +I  FC +G W +   L  +M++    P+++TF+ +I+ L K GK++
Sbjct: 104 DKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVS 163

Query: 281 EANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILI 340
           EA  +   M++RG+ P   TYNS++DG+C   R++ A+ +  SM SK C   VV+++ LI
Sbjct: 164 EAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLI 223

Query: 341 NGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVE 400
           NGYCK   V+  M ++ ++   G+    +TY TL+ G  Q G    AQ L + M    V 
Sbjct: 224 NGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVA 283

Query: 401 PDLSTYNILIDGLCKNNCVQEAVKLFHMLE 430
           P+  T+  ++  LC     +E  K F +LE
Sbjct: 284 PNYITFQSMLASLCSK---KELRKAFAILE 310



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 97/323 (30%), Positives = 169/323 (52%), Gaps = 4/323 (1%)

Query: 223 GINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEA 282
           G  P VV  TTL++G CC G   +   L   M++ G +P    +  +I+ LCK G    A
Sbjct: 5   GCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGDTESA 60

Query: 283 NGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILING 342
             LL  M +  +      YN+++D  C  G    A+ +F  MH KG    V++Y+ +I+ 
Sbjct: 61  LNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDS 120

Query: 343 YCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPD 402
           +C+     +A  L R +I   +   V+T++ L++ L + G+   A++++ +M    + P 
Sbjct: 121 FCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPT 180

Query: 403 LSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFH 462
             TYN +IDG CK + + +A ++   +        +  F+ LI+G CKA R+DN  E+F 
Sbjct: 181 TITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFC 240

Query: 463 KLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNN 522
           ++ ++G+V   VTY+ +IHG C+ G L+ A D L  M  +G APN +TF +++       
Sbjct: 241 EMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKK 300

Query: 523 KTSKVVELLHKMAEPERNLVPDD 545
           +  K   +L  + + E + + D+
Sbjct: 301 ELRKAFAILEDLQKSEGHHLEDE 323



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 40/157 (25%), Positives = 65/157 (41%), Gaps = 13/157 (8%)

Query: 56  LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNI 115
           ++EA   +G M      P   ++N +     K    +        + S    PD +T + 
Sbjct: 162 VSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFST 221

Query: 116 LINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLH 175
           LIN       G C   R+     +F  M   G+  + +TY TLI+GFC+ G+L  A  L 
Sbjct: 222 LIN-------GYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLL 274

Query: 176 KKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKA 212
             M+S           N  ++  ++ SLC +  + KA
Sbjct: 275 NVMISSGV------APNYITFQSMLASLCSKKELRKA 305



 Score = 40.8 bits (94), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 25/95 (26%), Positives = 50/95 (52%), Gaps = 6/95 (6%)

Query: 464 LPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNK 523
           + + G  P VVT++ +++GLC +G++ +A   +  M + G  P    + T+++G  +   
Sbjct: 1   MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGD 56

Query: 524 TSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKD 558
           T   + LL KM E   ++      ++ ++D L KD
Sbjct: 57  TESALNLLSKMEET--HIKAHVVIYNAIIDRLCKD 89


>gi|225462201|ref|XP_002269984.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79080,
           chloroplastic [Vitis vinifera]
 gi|147852271|emb|CAN82234.1| hypothetical protein VITISV_038804 [Vitis vinifera]
          Length = 567

 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 125/446 (28%), Positives = 225/446 (50%), Gaps = 9/446 (2%)

Query: 127 LCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENG 186
           LC  N++++AT + + MI  G  PD  +   L+N  C+ GN+  A++L +KM    Y   
Sbjct: 107 LCKSNKMRKATKVMELMIGSGTTPDPASCTFLVNNLCKRGNVGYAMQLVEKMEEYGY--- 163

Query: 187 LISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEE 246
               TN  +Y+ ++  LC  G + ++ ++  +   +G+ P V   + L+         +E
Sbjct: 164 ---PTNTVTYNSLVRGLCMHGNLSQSLQILDKFMKKGLVPNVFTYSFLLEAAYKERGADE 220

Query: 247 VNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMD 306
              L  E++  G +PNL+++NV++  LCK G+  EA      +  +G +P+  +YN L+ 
Sbjct: 221 AIRLLDEIVAKGGKPNLVSYNVLLTGLCKEGRTEEAMQFFRDLPSKGFSPNVVSYNILLR 280

Query: 307 GYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQ 366
             C  GR + A+E+   M       ++V++NILI         ++A+ +   +     + 
Sbjct: 281 SLCYEGRWEKAKELLAEMDGGERSPSIVTFNILIGSLALHGQTDQALEVLDDMSRARFKA 340

Query: 367 TVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLF 426
           T  +YN +++ L + G+     K  D+M      P+  TYN  I  LC+   VQEA  + 
Sbjct: 341 TAASYNPIIARLCKEGKVDLVVKCLDQMMYRRCNPNEGTYNA-IAVLCEEGKVQEAFSII 399

Query: 427 HMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRK 486
             L   +     + +  +I  LC+ G    A++L +++ + G VP   TYS +I GLC +
Sbjct: 400 QSLGNKQNSSTHDFYKGVISSLCRKGNTYPAFQLLYEMTKYGFVPDSYTYSSLIRGLCSE 459

Query: 487 GKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDT 546
           G L++A +    ME+N C P+V  FN L+ G  +  KT   + +   M   ++  +P++T
Sbjct: 460 GMLDEAMEIFSIMEENYCRPDVDNFNALILGLCKCRKTDLSLMVFEMMV--KKGYMPNET 517

Query: 547 TFSIVVDLLAKDEKYHECSAVSKSSY 572
           T++I+V+ +A  E+    +AV K  Y
Sbjct: 518 TYTIIVEGIAHQEEMELAAAVLKELY 543



 Score =  182 bits (461), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 127/465 (27%), Positives = 222/465 (47%), Gaps = 20/465 (4%)

Query: 40  QLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYR 99
           Q  + ++E CKS    + +A      M     +P  +S   L   + K  +    +    
Sbjct: 99  QATQLMYELCKSN--KMRKATKVMELMIGSGTTPDPASCTFLVNNLCKRGNVGYAMQLVE 156

Query: 100 KLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLI 159
           K+   G   + +T N L+       RGLC+   + ++  +    +  G+ P+V TY  L+
Sbjct: 157 KMEEYGYPTNTVTYNSLV-------RGLCMHGNLSQSLQILDKFMKKGLVPNVFTYSFLL 209

Query: 160 NGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEM 219
               +      A+RL  ++V+         K N+ SY++++  LCKEG  ++A + F ++
Sbjct: 210 EAAYKERGADEAIRLLDEIVAKG------GKPNLVSYNVLLTGLCKEGRTEEAMQFFRDL 263

Query: 220 KGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPR-PNLLTFNVMIDCLCKGGK 278
             +G +P VV    L+   C  G WE+   L  EM D G R P+++TFN++I  L   G+
Sbjct: 264 PSKGFSPNVVSYNILLRSLCYEGRWEKAKELLAEM-DGGERSPSIVTFNILIGSLALHGQ 322

Query: 279 INEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNI 338
            ++A  +L+ M +        +YN ++   C  G++D   +    M  + C     +YN 
Sbjct: 323 TDQALEVLDDMSRARFKATAASYNPIIARLCKEGKVDLVVKCLDQMMYRRCNPNEGTYNA 382

Query: 339 LINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYN 398
            I   C+   V+EA S+ + + +     T   Y  ++S L + G    A +L  EM  Y 
Sbjct: 383 -IAVLCEEGKVQEAFSIIQSLGNKQNSSTHDFYKGVISSLCRKGNTYPAFQLLYEMTKYG 441

Query: 399 VEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAW 458
             PD  TY+ LI GLC    + EA+++F ++E N     ++ FN LI GLCK  + D + 
Sbjct: 442 FVPDSYTYSSLIRGLCSEGMLDEAMEIFSIMEENYCRPDVDNFNALILGLCKCRKTDLSL 501

Query: 459 ELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFL--LYMEK 501
            +F  + +KG +P   TY+I++ G+  + ++E A   L  LY+ +
Sbjct: 502 MVFEMMVKKGYMPNETTYTIIVEGIAHQEEMELAAAVLKELYLRQ 546



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 79/258 (30%), Positives = 130/258 (50%)

Query: 278 KINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYN 337
           ++N+A   LE MI +G  PD      LM   C   ++  A ++   M   G      S  
Sbjct: 77  RLNDAFLYLEYMIGKGHKPDGGQATQLMYELCKSNKMRKATKVMELMIGSGTTPDPASCT 136

Query: 338 ILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLY 397
            L+N  CK  NV  AM L  ++   G     +TYN+L+ GL   G    + ++ D+    
Sbjct: 137 FLVNNLCKRGNVGYAMQLVEKMEEYGYPTNTVTYNSLVRGLCMHGNLSQSLQILDKFMKK 196

Query: 398 NVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNA 457
            + P++ TY+ L++   K     EA++L   +     +  +  +N L+ GLCK GR + A
Sbjct: 197 GLVPNVFTYSFLLEAAYKERGADEAIRLLDEIVAKGGKPNLVSYNVLLTGLCKEGRTEEA 256

Query: 458 WELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHG 517
            + F  LP KG  P VV+Y+I++  LC +G+ EKA + L  M+    +P++VTFN L+  
Sbjct: 257 MQFFRDLPSKGFSPNVVSYNILLRSLCYEGRWEKAKELLAEMDGGERSPSIVTFNILIGS 316

Query: 518 FLQNNKTSKVVELLHKMA 535
              + +T + +E+L  M+
Sbjct: 317 LALHGQTDQALEVLDDMS 334


>gi|242067038|ref|XP_002454808.1| hypothetical protein SORBIDRAFT_04g037860 [Sorghum bicolor]
 gi|241934639|gb|EES07784.1| hypothetical protein SORBIDRAFT_04g037860 [Sorghum bicolor]
          Length = 951

 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 133/483 (27%), Positives = 235/483 (48%), Gaps = 15/483 (3%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
           P + ++  L G   K +  D   S Y  +V  G+LPD +TL+ L++       GLC + +
Sbjct: 255 PNVVTYTALIGEYCKGKGMDEAFSLYEGMVRSGVLPDVVTLSALVD-------GLCRDGQ 307

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
             EA  LF+ M   GV P+ +TY TLI+   +    S +L L  +MVS     G++   +
Sbjct: 308 FSEAYALFREMDKIGVAPNHVTYCTLIDSLAKARRGSESLGLLGEMVS----RGVV--MD 361

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
           +  Y+ ++D L KEG +++AK++    +   I P  V  T L+   C AGN +    + +
Sbjct: 362 LVMYTALMDRLGKEGKIEEAKDVLRHAQSDNITPNFVTYTVLVDAHCRAGNIDGAEQVLL 421

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
           +M +    PN++TF+ +I+ L K G + +A   +  M   G+ P+  TY +L+DG+    
Sbjct: 422 QMEEKSVIPNVVTFSSIINGLVKRGCLGKAADYMRKMKDSGIAPNVVTYGTLIDGFFKFQ 481

Query: 313 RIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYN 372
             + A +++  M  +G +      + L+NG  K  N+E A +L++ +   G+    + Y 
Sbjct: 482 GQEAALDVYRDMLHEGVEANNFVVDSLVNGLRKNGNIEGAEALFKDMDERGLLLDHVNYT 541

Query: 373 TLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMN 432
           TL+ GLF+ G    A K+  E+   N+ PD   YN+ I+ LC      EA      +   
Sbjct: 542 TLMDGLFKTGNMPAAFKVGQELMEKNLSPDAVVYNVFINCLCTLGKFSEAKSFLKEMRNT 601

Query: 433 KFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKA 492
             E     +N +I   C+ G+   A +L  ++ +  + P ++TY+ ++ GL   G ++KA
Sbjct: 602 GLEPDQATYNTMIAARCREGKTSKALKLLKEMKRNSIKPNLITYTTLVVGLLEAGVVKKA 661

Query: 493 NDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVV 552
              L  M   G AP  +T   ++     + +   ++E+   M      L  D T ++ +V
Sbjct: 662 KFLLNEMASAGFAPTSLTHQRVLQACSGSRRPDVILEIHELMMGA--GLHADITVYNTLV 719

Query: 553 DLL 555
            +L
Sbjct: 720 HVL 722



 Score =  202 bits (513), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 147/516 (28%), Positives = 246/516 (47%), Gaps = 61/516 (11%)

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           D +  N LI+       G C    +  A  + + M   GV  DV+ Y +L+ GF  +G+ 
Sbjct: 186 DVVGWNALID-------GYCKVQDMAAALAVVERMTTQGVALDVVGYNSLVAGFFHSGDA 238

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
             AL + ++M +   E       N+ +Y+ +I   CK   +D+A  L+  M   G+ P V
Sbjct: 239 DAALEVVERMKADGVE------PNVVTYTALIGEYCKGKGMDEAFSLYEGMVRSGVLPDV 292

Query: 229 VVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLEL 288
           V  + L+ G C  G + E   LF EM  +G  PN +T+  +ID L K  + +E+ GLL  
Sbjct: 293 VTLSALVDGLCRDGQFSEAYALFREMDKIGVAPNHVTYCTLIDSLAKARRGSESLGLLGE 352

Query: 289 MIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILN 348
           M+ RG+  D   Y +LMD     G+I+ A+++     S       V+Y +L++ +C+  N
Sbjct: 353 MVSRGVVMDLVMYTALMDRLGKEGKIEEAKDVLRHAQSDNITPNFVTYTVLVDAHCRAGN 412

Query: 349 VEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNI 408
           ++ A  +  Q+    V   V+T++++++GL + G  G A     +MK   + P++ TY  
Sbjct: 413 IDGAEQVLLQMEEKSVIPNVVTFSSIINGLVKRGCLGKAADYMRKMKDSGIAPNVVTYGT 472

Query: 409 LIDGLCKNNCVQEAVKLFHML-----EMNKF--------------------------EFG 437
           LIDG  K    + A+ ++  +     E N F                          E G
Sbjct: 473 LIDGFFKFQGQEAALDVYRDMLHEGVEANNFVVDSLVNGLRKNGNIEGAEALFKDMDERG 532

Query: 438 IEI----FNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKAN 493
           + +    +  L+DGL K G +  A+++  +L +K L P  V Y++ I+ LC  GK  +A 
Sbjct: 533 LLLDHVNYTTLMDGLFKTGNMPAAFKVGQELMEKNLSPDAVVYNVFINCLCTLGKFSEAK 592

Query: 494 DFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLV-PDDTTF-SIV 551
            FL  M   G  P+  T+NT++    +  KTSK ++LL +M   +RN + P+  T+ ++V
Sbjct: 593 SFLKEMRNTGLEPDQATYNTMIAARCREGKTSKALKLLKEM---KRNSIKPNLITYTTLV 649

Query: 552 VDLLAKDEKYHECSAVSKSSYRACLYVTI-FQPSSL 586
           V LL       E   V K+ +      +  F P+SL
Sbjct: 650 VGLL-------EAGVVKKAKFLLNEMASAGFAPTSL 678



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 137/494 (27%), Positives = 226/494 (45%), Gaps = 15/494 (3%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
           N  +   CK  + ++  A      MT    +  +  +N L      +   DA +    ++
Sbjct: 191 NALIDGYCK--VQDMAAALAVVERMTTQGVALDVVGYNSLVAGFFHSGDADAALEVVERM 248

Query: 102 VSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLING 161
            + G+ P+ +T   LI  +       C    + EA  L++ M+  GV PDV+T   L++G
Sbjct: 249 KADGVEPNVVTYTALIGEY-------CKGKGMDEAFSLYEGMVRSGVLPDVVTLSALVDG 301

Query: 162 FCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKG 221
            CR G  S A  L ++M      + +    N  +Y  +IDSL K     ++  L  EM  
Sbjct: 302 LCRDGQFSEAYALFREM------DKIGVAPNHVTYCTLIDSLAKARRGSESLGLLGEMVS 355

Query: 222 RGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINE 281
           RG+   +V+ T L+      G  EE   +          PN +T+ V++D  C+ G I+ 
Sbjct: 356 RGVVMDLVMYTALMDRLGKEGKIEEAKDVLRHAQSDNITPNFVTYTVLVDAHCRAGNIDG 415

Query: 282 ANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILIN 341
           A  +L  M ++ + P+  T++S+++G    G +  A +    M   G    VV+Y  LI+
Sbjct: 416 AEQVLLQMEEKSVIPNVVTFSSIINGLVKRGCLGKAADYMRKMKDSGIAPNVVTYGTLID 475

Query: 342 GYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEP 401
           G+ K    E A+ +YR ++  GV       ++L++GL + G    A+ LF +M    +  
Sbjct: 476 GFFKFQGQEAALDVYRDMLHEGVEANNFVVDSLVNGLRKNGNIEGAEALFKDMDERGLLL 535

Query: 402 DLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELF 461
           D   Y  L+DGL K   +  A K+   L          ++N  I+ LC  G+   A    
Sbjct: 536 DHVNYTTLMDGLFKTGNMPAAFKVGQELMEKNLSPDAVVYNVFINCLCTLGKFSEAKSFL 595

Query: 462 HKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQN 521
            ++   GL P   TY+ MI   CR+GK  KA   L  M++N   PN++T+ TL+ G L+ 
Sbjct: 596 KEMRNTGLEPDQATYNTMIAARCREGKTSKALKLLKEMKRNSIKPNLITYTTLVVGLLEA 655

Query: 522 NKTSKVVELLHKMA 535
               K   LL++MA
Sbjct: 656 GVVKKAKFLLNEMA 669



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 154/594 (25%), Positives = 259/594 (43%), Gaps = 78/594 (13%)

Query: 44  FLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVS 103
            + E CK     ++EA   +  M      P + + + L   + ++  +    + +R++  
Sbjct: 263 LIGEYCKGK--GMDEAFSLYEGMVRSGVLPDVVTLSALVDGLCRDGQFSEAYALFREMDK 320

Query: 104 IGLLPDFLTLNILINCFGNKERG----------------------------LCVENRIKE 135
           IG+ P+ +T   LI+      RG                            L  E +I+E
Sbjct: 321 IGVAPNHVTYCTLIDSLAKARRGSESLGLLGEMVSRGVVMDLVMYTALMDRLGKEGKIEE 380

Query: 136 ATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFS 195
           A  + ++  +  + P+ +TY  L++  CR GN+  A ++  +M     E  +I   N+ +
Sbjct: 381 AKDVLRHAQSDNITPNFVTYTVLVDAHCRAGNIDGAEQVLLQM----EEKSVIP--NVVT 434

Query: 196 YSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEML 255
           +S II+ L K G + KA +   +MK  GI P VV   TLI GF      E    ++ +ML
Sbjct: 435 FSSIINGLVKRGCLGKAADYMRKMKDSGIAPNVVTYGTLIDGFFKFQGQEAALDVYRDML 494

Query: 256 DLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRID 315
             G   N    + +++ L K G I  A  L + M +RGL  D   Y +LMDG    G + 
Sbjct: 495 HEGVEANNFVVDSLVNGLRKNGNIEGAEALFKDMDERGLLLDHVNYTTLMDGLFKTGNMP 554

Query: 316 TAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLL 375
            A ++   +  K      V YN+ IN  C +    EA S  +++ + G+     TYNT++
Sbjct: 555 AAFKVGQELMEKNLSPDAVVYNVFINCLCTLGKFSEAKSFLKEMRNTGLEPDQATYNTMI 614

Query: 376 SGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEA------------- 422
           +   + G+   A KL  EMK  +++P+L TY  L+ GL +   V++A             
Sbjct: 615 AARCREGKTSKALKLLKEMKRNSIKPNLITYTTLVVGLLEAGVVKKAKFLLNEMASAGFA 674

Query: 423 -VKLFH---------------MLEMNKFEFG------IEIFNCLIDGLCKAGRLDNAWEL 460
              L H               +LE+++   G      I ++N L+  LC  G   NA  +
Sbjct: 675 PTSLTHQRVLQACSGSRRPDVILEIHELMMGAGLHADITVYNTLVHVLCCHGMARNATVV 734

Query: 461 FHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQ 520
             ++  +G+ P  +T++ +I G C+   L+ A      M   G +PN+ TFNTL+ G   
Sbjct: 735 LDEMLTRGIAPDTITFNALILGHCKSSHLDNAFAIYAQMLHQGLSPNIATFNTLLGGLES 794

Query: 521 NNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE-----CSAVSK 569
             +  +   +L  M +    L P++ T+ I+V   AK     E     C  VSK
Sbjct: 795 AGRIGEADTVLSDMKKV--GLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSK 846



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 131/508 (25%), Positives = 234/508 (46%), Gaps = 51/508 (10%)

Query: 65  YMTHMQPS---PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFG 121
           YM  M+ S   P + ++  L     K +  +A +  YR ++  G+  +   ++ L+N   
Sbjct: 454 YMRKMKDSGIAPNVVTYGTLIDGFFKFQGQEAALDVYRDMLHEGVEANNFVVDSLVN--- 510

Query: 122 NKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSG 181
               GL     I+ A  LFK+M   G+  D + Y TL++G  +TGN+  A ++ ++++  
Sbjct: 511 ----GLRKNGNIEGAEALFKDMDERGLLLDHVNYTTLMDGLFKTGNMPAAFKVGQELMEK 566

Query: 182 DYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCA 241
           +         +   Y++ I+ LC  G   +AK    EM+  G+ P      T+I   C  
Sbjct: 567 NLS------PDAVVYNVFINCLCTLGKFSEAKSFLKEMRNTGLEPDQATYNTMIAARCRE 620

Query: 242 GNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLL--------------- 286
           G   +   L  EM     +PNL+T+  ++  L + G + +A  LL               
Sbjct: 621 GKTSKALKLLKEMKRNSIKPNLITYTTLVVGLLEAGVVKKAKFLLNEMASAGFAPTSLTH 680

Query: 287 --------------------ELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHS 326
                               ELM+  GL+ D   YN+L+   C  G    A  +   M +
Sbjct: 681 QRVLQACSGSRRPDVILEIHELMMGAGLHADITVYNTLVHVLCCHGMARNATVVLDEMLT 740

Query: 327 KGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGY 386
           +G     +++N LI G+CK  +++ A ++Y Q++  G+   + T+NTLL GL  AG+ G 
Sbjct: 741 RGIAPDTITFNALILGHCKSSHLDNAFAIYAQMLHQGLSPNIATFNTLLGGLESAGRIGE 800

Query: 387 AQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLID 446
           A  +  +MK   +EP+  TY+IL+ G  K +   EA++L+  +    F      +N L+ 
Sbjct: 801 ADTVLSDMKKVGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLMS 860

Query: 447 GLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAP 506
              KAG ++ A ELF ++ ++G++ T  TY I+++G  +     +    L  M++ G  P
Sbjct: 861 DFAKAGMMNQAKELFSEMKRRGVLHTSSTYDILLNGWSKLRNGIEVRILLKDMKELGFKP 920

Query: 507 NVVTFNTLMHGFLQNNKTSKVVELLHKM 534
           +  T +++   F +   T +   LL  +
Sbjct: 921 SKGTISSMSRAFSRPGMTGEARRLLKTL 948



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 138/537 (25%), Positives = 237/537 (44%), Gaps = 50/537 (9%)

Query: 56  LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNI 115
           + EA+    +      +P   ++ +L  A  +  + D       ++    ++P+ +T + 
Sbjct: 378 IEEAKDVLRHAQSDNITPNFVTYTVLVDAHCRAGNIDGAEQVLLQMEEKSVIPNVVTFSS 437

Query: 116 LINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLH 175
           +IN       GL     + +A    + M   G+ P+V+TYGTLI+GF +      AL ++
Sbjct: 438 IIN-------GLVKRGCLGKAADYMRKMKDSGIAPNVVTYGTLIDGFFKFQGQEAALDVY 490

Query: 176 KKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLI 235
           + M+    E       N F    +++ L K G ++ A+ LF +M  RG+    V  TTL+
Sbjct: 491 RDMLHEGVE------ANNFVVDSLVNGLRKNGNIEGAEALFKDMDERGLLLDHVNYTTLM 544

Query: 236 HGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLN 295
            G    GN      +  E+++    P+ + +NV I+CLC  GK +EA   L+ M   GL 
Sbjct: 545 DGLFKTGNMPAAFKVGQELMEKNLSPDAVVYNVFINCLCTLGKFSEAKSFLKEMRNTGLE 604

Query: 296 PDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSL 355
           PD+ TYN+++   C  G+   A ++   M     K  +++Y  L+ G  +   V++A  L
Sbjct: 605 PDQATYNTMIAARCREGKTSKALKLLKEMKRNSIKPNLITYTTLVVGLLEAGVVKKAKFL 664

Query: 356 YRQIISNGVRQTVIT-----------------------------------YNTLLSGLFQ 380
             ++ S G   T +T                                   YNTL+  L  
Sbjct: 665 LNEMASAGFAPTSLTHQRVLQACSGSRRPDVILEIHELMMGAGLHADITVYNTLVHVLCC 724

Query: 381 AGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEI 440
            G A  A  + DEM    + PD  T+N LI G CK++ +  A  ++  +        I  
Sbjct: 725 HGMARNATVVLDEMLTRGIAPDTITFNALILGHCKSSHLDNAFAIYAQMLHQGLSPNIAT 784

Query: 441 FNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYME 500
           FN L+ GL  AGR+  A  +   + + GL P  +TY I++ G  +K    +A      M 
Sbjct: 785 FNTLLGGLESAGRIGEADTVLSDMKKVGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMV 844

Query: 501 KNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAK 557
             G  P   T+N+LM  F +    ++  EL  +M    R ++   +T+ I+++  +K
Sbjct: 845 SKGFIPKASTYNSLMSDFAKAGMMNQAKELFSEM--KRRGVLHTSSTYDILLNGWSK 899



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 122/411 (29%), Positives = 203/411 (49%), Gaps = 11/411 (2%)

Query: 149 RP---DVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCK 205
           RP   D +T  ++I  +C   +L  AL L +       ++ + + T   SY+I + +L +
Sbjct: 70  RPVPGDTLTLNSIILSYCSLRSLRPALSLLRSSSGPQSQSQVAADT--VSYNIFLAALSE 127

Query: 206 EGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLG---PRPN 262
           +G    A  +  EM  RG++   V  +T + G C  G   E   L  EML  G      +
Sbjct: 128 QGHGRLAPPVLSEMCKRGVSWDGVTVSTALVGLCRTGLVGEAAAL-AEMLVRGRGIDGLD 186

Query: 263 LLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFL 322
           ++ +N +ID  CK   +  A  ++E M  +G+  D   YNSL+ G+   G  D A E+  
Sbjct: 187 VVGWNALIDGYCKVQDMAAALAVVERMTTQGVALDVVGYNSLVAGFFHSGDADAALEVVE 246

Query: 323 SMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAG 382
            M + G +  VV+Y  LI  YCK   ++EA SLY  ++ +GV   V+T + L+ GL + G
Sbjct: 247 RMKADGVEPNVVTYTALIGEYCKGKGMDEAFSLYEGMVRSGVLPDVVTLSALVDGLCRDG 306

Query: 383 QAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFN 442
           Q   A  LF EM    V P+  TY  LID L K     E++ L   +        + ++ 
Sbjct: 307 QFSEAYALFREMDKIGVAPNHVTYCTLIDSLAKARRGSESLGLLGEMVSRGVVMDLVMYT 366

Query: 443 CLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKN 502
            L+D L K G+++ A ++        + P  VTY++++   CR G ++ A   LL ME+ 
Sbjct: 367 ALMDRLGKEGKIEEAKDVLRHAQSDNITPNFVTYTVLVDAHCRAGNIDGAEQVLLQMEEK 426

Query: 503 GCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
              PNVVTF+++++G ++     K  + + KM   +  + P+  T+  ++D
Sbjct: 427 SVIPNVVTFSSIINGLVKRGCLGKAADYMRKM--KDSGIAPNVVTYGTLID 475



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 115/426 (26%), Positives = 199/426 (46%), Gaps = 46/426 (10%)

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           D ++ NI +     +  G       + A  +   M   GV  D +T  T + G CRTG +
Sbjct: 114 DTVSYNIFLAALSEQGHG-------RLAPPVLSEMCKRGVSWDGVTVSTALVGLCRTGLV 166

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
             A  L + +V G   +GL    ++  ++ +ID  CK   +  A  +   M  +G+   V
Sbjct: 167 GEAAALAEMLVRGRGIDGL----DVVGWNALIDGYCKVQDMAAALAVVERMTTQGVALDV 222

Query: 229 VVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLEL 288
           V   +L+ GF  +G+ +    +   M   G  PN++T+  +I   CKG  ++EA  L E 
Sbjct: 223 VGYNSLVAGFFHSGDADAALEVVERMKADGVEPNVVTYTALIGEYCKGKGMDEAFSLYEG 282

Query: 289 MIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILN 348
           M++ G+ PD  T ++L+DG C  G+   A  +F  M   G     V+Y  LI+   K   
Sbjct: 283 MVRSGVLPDVVTLSALVDGLCRDGQFSEAYALFREMDKIGVAPNHVTYCTLIDSLAKARR 342

Query: 349 VEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNI 408
             E++ L  +++S GV   ++ Y  L+  L + G+   A+ +    +  N+ P+  TY +
Sbjct: 343 GSESLGLLGEMVSRGVVMDLVMYTALMDRLGKEGKIEEAKDVLRHAQSDNITPNFVTYTV 402

Query: 409 LIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKG 468
           L+D  C+                                   AG +D A ++  ++ +K 
Sbjct: 403 LVDAHCR-----------------------------------AGNIDGAEQVLLQMEEKS 427

Query: 469 LVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVV 528
           ++P VVT+S +I+GL ++G L KA D++  M+ +G APNVVT+ TL+ GF +       +
Sbjct: 428 VIPNVVTFSSIINGLVKRGCLGKAADYMRKMKDSGIAPNVVTYGTLIDGFFKFQGQEAAL 487

Query: 529 ELLHKM 534
           ++   M
Sbjct: 488 DVYRDM 493



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 76/260 (29%), Positives = 121/260 (46%), Gaps = 15/260 (5%)

Query: 32  AAVSSPETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHY 91
           A + +  T  N  +H  C  G+     A      M     +P   +FN L     K+ H 
Sbjct: 706 AGLHADITVYNTLVHVLCCHGMAR--NATVVLDEMLTRGIAPDTITFNALILGHCKSSHL 763

Query: 92  DAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPD 151
           D   + Y +++  GL P+  T N L+        GL    RI EA  +  +M   G+ P+
Sbjct: 764 DNAFAIYAQMLHQGLSPNIATFNTLLG-------GLESAGRIGEADTVLSDMKKVGLEPN 816

Query: 152 VITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDK 211
            +TY  L+ G+ +  N   ALRL+ +MVS     G I K +  +Y+ ++    K G++++
Sbjct: 817 NLTYDILVTGYAKKSNKVEALRLYCEMVS----KGFIPKAS--TYNSLMSDFAKAGMMNQ 870

Query: 212 AKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMID 271
           AKELF EMK RG+         L++G+    N  EV  L  +M +LG +P+  T + M  
Sbjct: 871 AKELFSEMKRRGVLHTSSTYDILLNGWSKLRNGIEVRILLKDMKELGFKPSKGTISSMSR 930

Query: 272 CLCKGGKINEANGLLELMIQ 291
              + G   EA  LL+ + +
Sbjct: 931 AFSRPGMTGEARRLLKTLFK 950


>gi|357155349|ref|XP_003577091.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Brachypodium distachyon]
          Length = 877

 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 124/436 (28%), Positives = 218/436 (50%), Gaps = 8/436 (1%)

Query: 125 RGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYE 184
           RGLC+E  +++   L +     G  P+ + Y  LI+G+CR G++   + L  +M +    
Sbjct: 267 RGLCLEGLVEKGLKLIEARWGAGCVPNAVFYNVLIDGYCRRGDVGRGILLLGEMEA---- 322

Query: 185 NGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNW 244
            GL+    + +Y  ++  L ++G ++K   L  EM+ R + P V +  ++I   C   + 
Sbjct: 323 KGLLP--TVVTYGTLMSWLGRKGDLEKIASLLSEMRERRLPPNVQIYNSVIDALCKCRSA 380

Query: 245 EEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSL 304
            +   +  +M   G  P+ +TF+ +I  LC+ G++ EA  LL    +  LNP+  +Y SL
Sbjct: 381 SQALVVLKQMFAGGCDPDAITFSTLISGLCQEGRVQEAERLLRETTRWELNPNLSSYTSL 440

Query: 305 MDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGV 364
           + G+C+ G +  A  + + M  +G    VV++  LI+G      V EA+ +  ++ +  +
Sbjct: 441 IHGFCVRGEVIVASNLLVEMMERGHTPDVVTFGALIHGLVVAGQVSEALLVREKMAARQL 500

Query: 365 RQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVK 424
                 YN L+SGL +      A+ L +EM   NV PD   Y  LIDG  +N  + EA K
Sbjct: 501 LPDANIYNVLISGLCKKKMLPAARNLIEEMLEQNVHPDKYVYTTLIDGFIRNESLDEARK 560

Query: 425 LFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLC 484
           +F  +E       +  +N +I G C+ G ++ A E    + + G +P   TY+ +I G  
Sbjct: 561 IFEFMEQKGIHPDVVGYNAMIKGYCQFGMMNEAVECMSTMRKVGRIPDEFTYTTLIGGYA 620

Query: 485 RKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPD 544
           ++G +  A   L  M K  C PNVV +++L++G+ +   T     L   M    + L P+
Sbjct: 621 KQGNISGALSLLCDMMKRRCQPNVVAYSSLINGYCKLGDTDAAECLFGSME--SQGLFPN 678

Query: 545 DTTFSIVVDLLAKDEK 560
             T++I++  L K +K
Sbjct: 679 VITYTILIGSLFKKDK 694



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 132/465 (28%), Positives = 221/465 (47%), Gaps = 19/465 (4%)

Query: 54  INLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTL 113
           + L EAR+  G +      P    +N+L     +       I    ++ + GLLP  +T 
Sbjct: 279 LKLIEARWGAGCV------PNAVFYNVLIDGYCRRGDVGRGILLLGEMEAKGLLPTVVTY 332

Query: 114 NILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALR 173
             L++  G K         +++   L   M    + P+V  Y ++I+  C+  + S AL 
Sbjct: 333 GTLMSWLGRK-------GDLEKIASLLSEMRERRLPPNVQIYNSVIDALCKCRSASQALV 385

Query: 174 LHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTT 233
           + K+M +G  +       +  ++S +I  LC+EG V +A+ L  E     +NP +   T+
Sbjct: 386 VLKQMFAGGCD------PDAITFSTLISGLCQEGRVQEAERLLRETTRWELNPNLSSYTS 439

Query: 234 LIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRG 293
           LIHGFC  G     + L +EM++ G  P+++TF  +I  L   G+++EA  + E M  R 
Sbjct: 440 LIHGFCVRGEVIVASNLLVEMMERGHTPDVVTFGALIHGLVVAGQVSEALLVREKMAARQ 499

Query: 294 LNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAM 353
           L PD   YN L+ G C    +  AR +   M  +        Y  LI+G+ +  +++EA 
Sbjct: 500 LLPDANIYNVLISGLCKKKMLPAARNLIEEMLEQNVHPDKYVYTTLIDGFIRNESLDEAR 559

Query: 354 SLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGL 413
            ++  +   G+   V+ YN ++ G  Q G    A +    M+     PD  TY  LI G 
Sbjct: 560 KIFEFMEQKGIHPDVVGYNAMIKGYCQFGMMNEAVECMSTMRKVGRIPDEFTYTTLIGGY 619

Query: 414 CKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTV 473
            K   +  A+ L   +   + +  +  ++ LI+G CK G  D A  LF  +  +GL P V
Sbjct: 620 AKQGNISGALSLLCDMMKRRCQPNVVAYSSLINGYCKLGDTDAAECLFGSMESQGLFPNV 679

Query: 474 VTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGF 518
           +TY+I+I  L +K K+ +A  +  YM  N C+PN  T ++L+ G 
Sbjct: 680 ITYTILIGSLFKKDKVVRAAMYFEYMLLNQCSPNDYTLHSLVTGL 724



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 131/478 (27%), Positives = 220/478 (46%), Gaps = 51/478 (10%)

Query: 55  NLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLN 114
           +L +       M   +  P +  +N +  A+ K R     +   +++ + G  PD +T +
Sbjct: 344 DLEKIASLLSEMRERRLPPNVQIYNSVIDALCKCRSASQALVVLKQMFAGGCDPDAITFS 403

Query: 115 ILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRL 174
            LI+       GLC E R++EA  L +    + + P++ +Y +LI+GFC  G + VA  L
Sbjct: 404 TLIS-------GLCQEGRVQEAERLLRETTRWELNPNLSSYTSLIHGFCVRGEVIVASNL 456

Query: 175 --------------------HKKMVSGDYENGLISKTNIFS---------YSIIIDSLCK 205
                               H  +V+G     L+ +  + +         Y+++I  LCK
Sbjct: 457 LVEMMERGHTPDVVTFGALIHGLVVAGQVSEALLVREKMAARQLLPDANIYNVLISGLCK 516

Query: 206 EGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLT 265
           + ++  A+ L  EM  + ++P   V TTLI GF    + +E   +F  M   G  P+++ 
Sbjct: 517 KKMLPAARNLIEEMLEQNVHPDKYVYTTLIDGFIRNESLDEARKIFEFMEQKGIHPDVVG 576

Query: 266 FNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMH 325
           +N MI   C+ G +NEA   +  M + G  PD FTY +L+ GY   G I  A  +   M 
Sbjct: 577 YNAMIKGYCQFGMMNEAVECMSTMRKVGRIPDEFTYTTLIGGYAKQGNISGALSLLCDMM 636

Query: 326 SKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAG 385
            + C+  VV+Y+ LINGYCK+ + + A  L+  + S G+   VITY  L+  LF+  +  
Sbjct: 637 KRRCQPNVVAYSSLINGYCKLGDTDAAECLFGSMESQGLFPNVITYTILIGSLFKKDKVV 696

Query: 386 YAQKLFDEMKLYNVEPDLSTYNILIDGLC-------KNNCVQEA--------VKLFHMLE 430
            A   F+ M L    P+  T + L+ GLC        ++C            + +F  L 
Sbjct: 697 RAAMYFEYMLLNQCSPNDYTLHSLVTGLCNSMASIISSHCSSTVNLHGKGALLDIFRALV 756

Query: 431 MNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGK 488
            ++ +     +N +I  LC    L  A +L +K+  KG  P   T+  +++G C  GK
Sbjct: 757 NDRCDPRNSAYNAIIFSLCIHNMLGEALDLKNKMANKGYKPDSATFLSLLYGFCSVGK 814



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 78/307 (25%), Positives = 125/307 (40%), Gaps = 34/307 (11%)

Query: 55  NLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLN 114
           +L+EAR  F +M      P +  +N +     +    +  +     +  +G +PD  T  
Sbjct: 554 SLDEARKIFEFMEQKGIHPDVVGYNAMIKGYCQFGMMNEAVECMSTMRKVGRIPDEFTYT 613

Query: 115 ILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRL 174
            LI        G   +  I  A  L  +M+    +P+V+ Y +LING+C+ G+   A  L
Sbjct: 614 TLIG-------GYAKQGNISGALSLLCDMMKRRCQPNVVAYSSLINGYCKLGDTDAAECL 666

Query: 175 HKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTL 234
              M S     GL    N+ +Y+I+I SL K+  V +A   F  M     +P      +L
Sbjct: 667 FGSMES----QGLFP--NVITYTILIGSLFKKDKVVRAAMYFEYMLLNQCSPNDYTLHSL 720

Query: 235 IHGFC----------CAGNWEEVN--------GLFIEMLDLGPRPNLLTFNVMIDCLCKG 276
           + G C          C+     VN         +F  +++    P    +N +I  LC  
Sbjct: 721 VTGLCNSMASIISSHCSST---VNLHGKGALLDIFRALVNDRCDPRNSAYNAIIFSLCIH 777

Query: 277 GKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSY 336
             + EA  L   M  +G  PD  T+ SL+ G+C VG+    R I  +   +        Y
Sbjct: 778 NMLGEALDLKNKMANKGYKPDSATFLSLLYGFCSVGKSREWRTILPNEFQRDELEVASRY 837

Query: 337 NILINGY 343
            IL + Y
Sbjct: 838 KILFDQY 844


>gi|125582060|gb|EAZ22991.1| hypothetical protein OsJ_06687 [Oryza sativa Japonica Group]
          Length = 466

 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 131/456 (28%), Positives = 230/456 (50%), Gaps = 27/456 (5%)

Query: 108 PDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGN 167
           PD  T N ++       +GLC+  + +EA  L   MI     P+ +T+ T I  FC+ G 
Sbjct: 5   PDTYTYNTVL-------KGLCIAKKWEEAEELMAEMIRNRCPPNEVTFATQIRSFCQNGL 57

Query: 168 LSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPA 227
           L  A++L  +M             ++  YS +I+   ++G VD+A +L   M  +   P 
Sbjct: 58  LDRAVQLLDQMPRYG------CTPDVVIYSTLINGFSEQGHVDQALDLLNTMLCK---PN 108

Query: 228 VVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLE 287
            V     + G C A  WE++  L  EM+  G  PN  TF+++I  LC+   ++ A  +LE
Sbjct: 109 TVCYNAALKGLCIAERWEDIGELMAEMVRKGCSPNEATFSMLISSLCQNNLVDSAVEVLE 168

Query: 288 LMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKIL 347
            M + G  PD   YN +++     GR+D A  +  SM    CK   + +N ++ G+C+  
Sbjct: 169 QMEKYGCEPDTVNYNIIINSLSERGRVDDALRLLNSMV---CKPDALGFNAVLKGFCRAE 225

Query: 348 NVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYN 407
              +A  L  Q+  +      +T+N L+  L Q G   YA ++F++M  Y   PD+ TY+
Sbjct: 226 RWHDASELIAQMFRDDCPLIEMTFNILIDMLCQNGLVNYATQVFEQMPRYRCTPDIVTYS 285

Query: 408 ILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQK 467
            L++G  +   V+ A++LF  +      F    +N ++ GLC+A R ++A EL  ++  K
Sbjct: 286 SLLNGFSEQGLVEVAIQLFRSMPCKPDIFS---YNAVLKGLCRAARWEDAGELIAEMVGK 342

Query: 468 GLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKV 527
              P  VT++I+I+ LC+KG +++A + L  M   G  P++ T+N L++GF +  +    
Sbjct: 343 DCPPNEVTFNILINSLCQKGLVDRAIEVLEQMPNYGSTPDIFTYNALINGFSEQGRLDDA 402

Query: 528 VELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
           ++LL  M+       PD  +++  +  L + E++ +
Sbjct: 403 LKLLSTMS-----CKPDAISYNSTLKGLCRAERWQD 433



 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 121/428 (28%), Positives = 201/428 (46%), Gaps = 35/428 (8%)

Query: 120 FGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMV 179
           F  + R  C    +  A  L   M  +G  PDV+ Y TLINGF   G++  AL L   M+
Sbjct: 45  FATQIRSFCQNGLLDRAVQLLDQMPRYGCTPDVVIYSTLINGFSEQGHVDQALDLLNTML 104

Query: 180 S-----------------------GDYENGLISK---TNIFSYSIIIDSLCKEGLVDKAK 213
                                   G+    ++ K    N  ++S++I SLC+  LVD A 
Sbjct: 105 CKPNTVCYNAALKGLCIAERWEDIGELMAEMVRKGCSPNEATFSMLISSLCQNNLVDSAV 164

Query: 214 ELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCL 273
           E+  +M+  G  P  V    +I+     G  ++   L   M+    +P+ L FN ++   
Sbjct: 165 EVLEQMEKYGCEPDTVNYNIIINSLSERGRVDDALRLLNSMV---CKPDALGFNAVLKGF 221

Query: 274 CKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTV 333
           C+  + ++A+ L+  M +        T+N L+D  C  G ++ A ++F  M    C   +
Sbjct: 222 CRAERWHDASELIAQMFRDDCPLIEMTFNILIDMLCQNGLVNYATQVFEQMPRYRCTPDI 281

Query: 334 VSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDE 393
           V+Y+ L+NG+ +   VE A+ L+R   S   +  + +YN +L GL +A +   A +L  E
Sbjct: 282 VTYSSLLNGFSEQGLVEVAIQLFR---SMPCKPDIFSYNAVLKGLCRAARWEDAGELIAE 338

Query: 394 MKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGR 453
           M   +  P+  T+NILI+ LC+   V  A+++   +        I  +N LI+G  + GR
Sbjct: 339 MVGKDCPPNEVTFNILINSLCQKGLVDRAIEVLEQMPNYGSTPDIFTYNALINGFSEQGR 398

Query: 454 LDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNT 513
           LD+A +L   +  K   P  ++Y+  + GLCR  + + A + +  M +N C PN VTF  
Sbjct: 399 LDDALKLLSTMSCK---PDAISYNSTLKGLCRAERWQDAEELVAEMLRNKCTPNEVTFKY 455

Query: 514 LMHGFLQN 521
             H  + N
Sbjct: 456 ANHLLMPN 463



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 94/332 (28%), Positives = 158/332 (47%), Gaps = 51/332 (15%)

Query: 72  SPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVEN 131
           SP  ++F++L  ++ +N   D+ +    ++   G  PD +  NI+IN     ERG     
Sbjct: 141 SPNEATFSMLISSLCQNNLVDSAVEVLEQMEKYGCEPDTVNYNIIINSLS--ERG----- 193

Query: 132 RIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKT 191
           R+ +A  L  +M+    +PD + +  ++ GFCR      A  L  +M   D    LI  T
Sbjct: 194 RVDDALRLLNSMVC---KPDALGFNAVLKGFCRAERWHDASELIAQMFRDDCP--LIEMT 248

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGF------------- 238
               ++I+ID LC+ GLV+ A ++F +M      P +V  ++L++GF             
Sbjct: 249 ----FNILIDMLCQNGLVNYATQVFEQMPRYRCTPDIVTYSSLLNGFSEQGLVEVAIQLF 304

Query: 239 -------------------CCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKI 279
                              C A  WE+   L  EM+     PN +TFN++I+ LC+ G +
Sbjct: 305 RSMPCKPDIFSYNAVLKGLCRAARWEDAGELIAEMVGKDCPPNEVTFNILINSLCQKGLV 364

Query: 280 NEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNIL 339
           + A  +LE M   G  PD FTYN+L++G+   GR+D A ++  +M    CK   +SYN  
Sbjct: 365 DRAIEVLEQMPNYGSTPDIFTYNALINGFSEQGRLDDALKLLSTM---SCKPDAISYNST 421

Query: 340 INGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
           + G C+    ++A  L  +++ N      +T+
Sbjct: 422 LKGLCRAERWQDAEELVAEMLRNKCTPNEVTF 453



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 92/340 (27%), Positives = 164/340 (48%), Gaps = 11/340 (3%)

Query: 224 INPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEAN 283
           + P      T++ G C A  WEE   L  EM+     PN +TF   I   C+ G ++ A 
Sbjct: 3   VAPDTYTYNTVLKGLCIAKKWEEAEELMAEMIRNRCPPNEVTFATQIRSFCQNGLLDRAV 62

Query: 284 GLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGY 343
            LL+ M + G  PD   Y++L++G+   G +D A ++  +M    CK   V YN  + G 
Sbjct: 63  QLLDQMPRYGCTPDVVIYSTLINGFSEQGHVDQALDLLNTML---CKPNTVCYNAALKGL 119

Query: 344 CKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDL 403
           C     E+   L  +++  G      T++ L+S L Q      A ++ ++M+ Y  EPD 
Sbjct: 120 CIAERWEDIGELMAEMVRKGCSPNEATFSMLISSLCQNNLVDSAVEVLEQMEKYGCEPDT 179

Query: 404 STYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHK 463
             YNI+I+ L +   V +A++L + +       G   FN ++ G C+A R  +A EL  +
Sbjct: 180 VNYNIIINSLSERGRVDDALRLLNSMVCKPDALG---FNAVLKGFCRAERWHDASELIAQ 236

Query: 464 LPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNK 523
           + +       +T++I+I  LC+ G +  A      M +  C P++VT+++L++GF +   
Sbjct: 237 MFRDDCPLIEMTFNILIDMLCQNGLVNYATQVFEQMPRYRCTPDIVTYSSLLNGFSEQGL 296

Query: 524 TSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
               ++L   M        PD  +++ V+  L +  ++ +
Sbjct: 297 VEVAIQLFRSMP-----CKPDIFSYNAVLKGLCRAARWED 331



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 65/239 (27%), Positives = 114/239 (47%), Gaps = 8/239 (3%)

Query: 335 SYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEM 394
           +YN ++ G C     EEA  L  ++I N      +T+ T +    Q G    A +L D+M
Sbjct: 9   TYNTVLKGLCIAKKWEEAEELMAEMIRNRCPPNEVTFATQIRSFCQNGLLDRAVQLLDQM 68

Query: 395 KLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRL 454
             Y   PD+  Y+ LI+G  +   V +A+ L + +           +N  + GLC A R 
Sbjct: 69  PRYGCTPDVVIYSTLINGFSEQGHVDQALDLLNTMLCKP---NTVCYNAALKGLCIAERW 125

Query: 455 DNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTL 514
           ++  EL  ++ +KG  P   T+S++I  LC+   ++ A + L  MEK GC P+ V +N +
Sbjct: 126 EDIGELMAEMVRKGCSPNEATFSMLISSLCQNNLVDSAVEVLEQMEKYGCEPDTVNYNII 185

Query: 515 MHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKSSYR 573
           ++   +  +    + LL+ M        PD   F+ V+    + E++H+ S +    +R
Sbjct: 186 INSLSERGRVDDALRLLNSMV-----CKPDALGFNAVLKGFCRAERWHDASELIAQMFR 239


>gi|302806388|ref|XP_002984944.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
 gi|300147530|gb|EFJ14194.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
          Length = 468

 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 133/467 (28%), Positives = 230/467 (49%), Gaps = 21/467 (4%)

Query: 77  SFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEA 136
           +++ +  ++AK       +  +  + S   +P  +T N+LIN         C      +A
Sbjct: 12  AYDFVVQSLAKAGMLAQALEVFETMKSESCVPSLVTYNVLIN-------SRCNAGEFGKA 64

Query: 137 TWLFKNMIAFG-VRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFS 195
             LF++M     V PD  TY TLI+G C +GN   A +L  +M   +         N+F+
Sbjct: 65  LDLFQSMKREKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNI------AANVFT 118

Query: 196 YSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEML 255
           YS II SL KE   +++ ++  EM   G NP V     ++ GF  + N E+   ++  M+
Sbjct: 119 YSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMV 178

Query: 256 DLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQR--GLNPDRFTYNSLMDGYCLVGR 313
           + G +P+ ++++++I  L K GK++E+  +L  M  R  G  P+  T+++L+ G C  G 
Sbjct: 179 ESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGE 238

Query: 314 IDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNT 373
           ++ A E+F SM   GCK    +Y  LI G C+   V +A  L+ ++    +    + YN+
Sbjct: 239 LEKALEVFGSMLEAGCKPNKYTYTTLIAGLCRAEKVIQARELFEKMTQACIPPDAVAYNS 298

Query: 374 LLSGLFQAGQAGYAQKLFDEMKL-YNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMN 432
           L++G  + G    A+KL+ EM     ++P + T+N LIDG CK   +  A +L   +   
Sbjct: 299 LIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTK 358

Query: 433 KFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKA 492
                   +  LI GL +A +LD A E++ ++ +K  +   V+    + GLC+ G +++A
Sbjct: 359 GLAADTCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQA 418

Query: 493 NDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPER 539
                   K+G  PN  TF  L    ++  +    VE   K+ EP +
Sbjct: 419 YAVFEATRKSGAVPNPETFRILSESLIKLGR----VEDAQKLMEPAK 461



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 126/394 (31%), Positives = 202/394 (51%), Gaps = 10/394 (2%)

Query: 154 TYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAK 213
            Y  ++    + G L+ AL + + M S      L++      Y+++I+S C  G   KA 
Sbjct: 12  AYDFVVQSLAKAGMLAQALEVFETMKSESCVPSLVT------YNVLINSRCNAGEFGKAL 65

Query: 214 ELFLEMK-GRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDC 272
           +LF  MK  + + P      TLI G C +GN E    L  EM D     N+ T++ +I  
Sbjct: 66  DLFQSMKREKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIKS 125

Query: 273 LCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHT 332
           L K  K  E+  +LE M+  G NPD F +N +M G+     ++ ARE++  M   G K  
Sbjct: 126 LVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPD 185

Query: 333 VVSYNILINGYCKILNVEEAMSLYRQII--SNGVRQTVITYNTLLSGLFQAGQAGYAQKL 390
            VSY+ILI+G  KI  ++E++ +  ++   + G    VIT++TL+ GL + G+   A ++
Sbjct: 186 NVSYHILIHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKALEV 245

Query: 391 FDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCK 450
           F  M     +P+  TY  LI GLC+   V +A +LF  +           +N LI G CK
Sbjct: 246 FGSMLEAGCKPNKYTYTTLIAGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCK 305

Query: 451 AGRLDNAWELFHKLP-QKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVV 509
            G +D A +L+ ++    GL PT+VT++ +I G C+ GKL +AN+ +  M   G A +  
Sbjct: 306 RGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADTC 365

Query: 510 TFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVP 543
           T+  L+ G  +  K  + +E+  +M E +  L P
Sbjct: 366 TYRILIAGLSRATKLDEALEVYKQMREKKFLLDP 399



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 102/330 (30%), Positives = 163/330 (49%), Gaps = 16/330 (4%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
           P + +FN +    A++ + +     Y+ +V  G  PD ++ +ILI+       GL    +
Sbjct: 149 PDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHILIH-------GLAKIGK 201

Query: 133 IKEATWLFKNMI--AFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISK 190
           + E+  +   M   A G  P+VIT+ TLI+G CRTG L  AL +   M+          K
Sbjct: 202 LDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAG------CK 255

Query: 191 TNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGL 250
            N ++Y+ +I  LC+   V +A+ELF +M    I P  V   +LI G+C  G+ +E   L
Sbjct: 256 PNKYTYTTLIAGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKL 315

Query: 251 FIEMLD-LGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYC 309
           + EM    G +P ++TFN +ID  CK GK+  AN L+  M  +GL  D  TY  L+ G  
Sbjct: 316 YREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADTCTYRILIAGLS 375

Query: 310 LVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVI 369
              ++D A E++  M  K      VS    + G CK  N+++A +++     +G      
Sbjct: 376 RATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPE 435

Query: 370 TYNTLLSGLFQAGQAGYAQKLFDEMKLYNV 399
           T+  L   L + G+   AQKL +  K  ++
Sbjct: 436 TFRILSESLIKLGRVEDAQKLMEPAKARDI 465



 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 106/409 (25%), Positives = 191/409 (46%), Gaps = 14/409 (3%)

Query: 20  KLSSLFKSPRQIAAVSSPETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFN 79
           K   LF+S ++   V       N  +   C SG  N   AR     M     +  + +++
Sbjct: 63  KALDLFQSMKREKRVEPDRWTYNTLISGLCSSG--NTEGARKLLSEMRDKNIAANVFTYS 120

Query: 80  LLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWL 139
            +  ++ K    +       ++++ G  PD    N ++       +G    N +++A  +
Sbjct: 121 SIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVM-------QGFARSNNMEKAREV 173

Query: 140 FKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSII 199
           +++M+  G +PD ++Y  LI+G  + G L  +L++  +M       G +   N+ ++S +
Sbjct: 174 YQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMAM--RAAGYVP--NVITFSTL 229

Query: 200 IDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGP 259
           I  LC+ G ++KA E+F  M   G  P     TTLI G C A    +   LF +M     
Sbjct: 230 IHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLIAGLCRAEKVIQARELFEKMTQACI 289

Query: 260 RPNLLTFNVMIDCLCKGGKINEANGLL-ELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAR 318
            P+ + +N +I   CK G ++EA  L  E+    GL P   T+N+L+DG+C +G++  A 
Sbjct: 290 PPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRAN 349

Query: 319 EIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGL 378
           E+   M +KG      +Y ILI G  +   ++EA+ +Y+Q+         ++  + + GL
Sbjct: 350 ELVAEMGTKGLAADTCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGL 409

Query: 379 FQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFH 427
            + G    A  +F+  +     P+  T+ IL + L K   V++A KL  
Sbjct: 410 CKTGNIDQAYAVFEATRKSGAVPNPETFRILSESLIKLGRVEDAQKLME 458



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 74/280 (26%), Positives = 129/280 (46%), Gaps = 40/280 (14%)

Query: 335 SYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEM 394
           +Y+ ++    K   + +A+ ++  + S     +++TYN L++    AG+ G A  LF  M
Sbjct: 12  AYDFVVQSLAKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGEFGKALDLFQSM 71

Query: 395 KL-YNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLE-----MNKFEFGIEI-------- 440
           K    VEPD  TYN LI GLC +   + A KL   +       N F +   I        
Sbjct: 72  KREKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIKSLVKEAK 131

Query: 441 ----------------------FNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSI 478
                                 FN ++ G  ++  ++ A E++  + + G  P  V+Y I
Sbjct: 132 PEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHI 191

Query: 479 MIHGLCRKGKLEKANDFL--LYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAE 536
           +IHGL + GKL+++   L  + M   G  PNV+TF+TL+HG  +  +  K +E+   M E
Sbjct: 192 LIHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLE 251

Query: 537 PERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKSSYRACL 576
                 P+  T++ ++  L + EK  +   + +   +AC+
Sbjct: 252 A--GCKPNKYTYTTLIAGLCRAEKVIQARELFEKMTQACI 289



 Score = 68.9 bits (167), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 40/136 (29%), Positives = 71/136 (52%), Gaps = 3/136 (2%)

Query: 433 KFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKA 492
           K   G + ++ ++  L KAG L  A E+F  +  +  VP++VTY+++I+  C  G+  KA
Sbjct: 5   KCAIGGDAYDFVVQSLAKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGEFGKA 64

Query: 493 NDFLLYMEKNG-CAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIV 551
            D    M++     P+  T+NTL+ G   +  T    +LL +M   ++N+  +  T+S +
Sbjct: 65  LDLFQSMKREKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMR--DKNIAANVFTYSSI 122

Query: 552 VDLLAKDEKYHECSAV 567
           +  L K+ K  E   V
Sbjct: 123 IKSLVKEAKPEESYKV 138


>gi|255546727|ref|XP_002514422.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223546418|gb|EEF47918.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 809

 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 152/585 (25%), Positives = 269/585 (45%), Gaps = 100/585 (17%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           C+ G  NL EA   F  M     +P   S+      +  +   D      + +++  +  
Sbjct: 230 CRKG--NLAEAIDVFRDMEESGVTPNSFSYTTFIEGLCLHGRSDLGFKVLQDVINAKIPM 287

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           D     ++I       RG C E ++KEA  + + M   G  PDV  Y  LI+G+C  GNL
Sbjct: 288 DVFAYTVVI-------RGFCSEMKLKEAESILREMEKQGFAPDVYVYCALISGYCMVGNL 340

Query: 169 SVALRLHKKMVS---------------GDYENGLIS----------KTNIF----SYSII 199
             AL LH +MVS               G  + G+ S          K  IF     Y+++
Sbjct: 341 LKALALHDEMVSKGVKTNCVILSSILQGLSQMGMASEVANQFKEFKKMGIFFDEACYNVV 400

Query: 200 IDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGP 259
           +D+LCK G V++A EL +EMKG+ + P ++  TT+I G+   G   +   ++ EM D+G 
Sbjct: 401 MDALCKLGKVEEAVELLVEMKGKKMVPDIINYTTVISGYFLKGKVVDALNIYREMKDIGH 460

Query: 260 RPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTARE 319
           +P+++T+NV+     + G   EA  LL  M  +G+ PD  T+N +++G C+ G++D A+ 
Sbjct: 461 KPDIVTYNVLAGGFSRNGLTQEALSLLNYMETQGVKPDTVTHNMIIEGLCIGGKVDDAQA 520

Query: 320 IFLSMHSKGCKHTVVSYNILINGYCKILNV------------------------------ 349
            F ++  K     + +Y+ ++NGYC+  +V                              
Sbjct: 521 FFDNLEEK----CLENYSAMVNGYCEANHVNKAFALLIRLSKQGRILKKASFFKLLGNLC 576

Query: 350 -----EEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLS 404
                E+A+ L   +++  +  T+I Y+ ++  LFQAG+   AQ +F+ +    + PD+ 
Sbjct: 577 SEGDSEKALCLLETMVALNINPTMIMYSKVIGALFQAGEMEKAQYVFNMLVDRGLAPDVI 636

Query: 405 TYNILIDGLCKNNCVQEAVKLFHML--------EMNKFEFGIEIFNC----------LID 446
           TY I+I+G C+ N ++EA   +H+L        E +   + + + NC           +D
Sbjct: 637 TYTIMINGYCRMNKMKEA---WHVLGDMKNRGIEPDVITYTVLLNNCSKIDLRSSSSSLD 693

Query: 447 GLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAP 506
            +     + +   L+ ++    + P V+ Y+++I   C+   ++ A +    M   G AP
Sbjct: 694 AMKSKENMMDPSALWSEMKDMDIKPDVICYTVLIDKHCKTNNIQDAINLFNEMIDRGLAP 753

Query: 507 NVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIV 551
           + VT+  L+ G+       K V L  +M    + + PD  T S++
Sbjct: 754 DTVTYTALLSGYCNVGNIKKAVVLFDEML--NKGIRPDAHTMSVL 796



 Score =  165 bits (418), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 99/344 (28%), Positives = 170/344 (49%)

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
           I S + +++ L +   VD A  ++ ++K  G+NP     T  I GFC  GN  E   +F 
Sbjct: 184 ILSCNFLMNRLVESRKVDMAIAIYRQLKAFGLNPNDYTYTIAIKGFCRKGNLAEAIDVFR 243

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
           +M + G  PN  ++   I+ LC  G+ +    +L+ +I   +  D F Y  ++ G+C   
Sbjct: 244 DMEESGVTPNSFSYTTFIEGLCLHGRSDLGFKVLQDVINAKIPMDVFAYTVVIRGFCSEM 303

Query: 313 RIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYN 372
           ++  A  I   M  +G    V  Y  LI+GYC + N+ +A++L+ +++S GV+   +  +
Sbjct: 304 KLKEAESILREMEKQGFAPDVYVYCALISGYCMVGNLLKALALHDEMVSKGVKTNCVILS 363

Query: 373 TLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMN 432
           ++L GL Q G A      F E K   +  D + YN+++D LCK   V+EAV+L   ++  
Sbjct: 364 SILQGLSQMGMASEVANQFKEFKKMGIFFDEACYNVVMDALCKLGKVEEAVELLVEMKGK 423

Query: 433 KFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKA 492
           K    I  +  +I G    G++ +A  ++ ++   G  P +VTY+++  G  R G  ++A
Sbjct: 424 KMVPDIINYTTVISGYFLKGKVVDALNIYREMKDIGHKPDIVTYNVLAGGFSRNGLTQEA 483

Query: 493 NDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAE 536
              L YME  G  P+ VT N ++ G     K          + E
Sbjct: 484 LSLLNYMETQGVKPDTVTHNMIIEGLCIGGKVDDAQAFFDNLEE 527



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 116/458 (25%), Positives = 213/458 (46%), Gaps = 28/458 (6%)

Query: 140 FKNMIAFGVRPDVITYGTLINGFCRTGNL----SVALRLHKKMVSGDYENGLISKTNIF- 194
           F  +   G   D  TY  ++   C  G      S+ + + KK   G+ + G++   N+F 
Sbjct: 80  FNQLKESGYSHDPYTYAAIVRILCFWGWSRKLDSILMEIIKK--DGNLDFGIV---NLFE 134

Query: 195 ---------SYSIII---DSLCK----EGLVDKAKELFLEMKGRGINPAVVVCTTLIHGF 238
                    S+S+++   D+L K     G+ D+A ++ L+ K  G  P ++ C  L++  
Sbjct: 135 ALGDGIANESFSVLVQVSDALIKVCVASGMFDQAFDVLLQTKHCGFAPQILSCNFLMNRL 194

Query: 239 CCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDR 298
             +   +    ++ ++   G  PN  T+ + I   C+ G + EA  +   M + G+ P+ 
Sbjct: 195 VESRKVDMAIAIYRQLKAFGLNPNDYTYTIAIKGFCRKGNLAEAIDVFRDMEESGVTPNS 254

Query: 299 FTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQ 358
           F+Y + ++G CL GR D   ++   + +      V +Y ++I G+C  + ++EA S+ R+
Sbjct: 255 FSYTTFIEGLCLHGRSDLGFKVLQDVINAKIPMDVFAYTVVIRGFCSEMKLKEAESILRE 314

Query: 359 IISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNC 418
           +   G    V  Y  L+SG    G    A  L DEM    V+ +    + ++ GL +   
Sbjct: 315 MEKQGFAPDVYVYCALISGYCMVGNLLKALALHDEMVSKGVKTNCVILSSILQGLSQMGM 374

Query: 419 VQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSI 478
             E    F   +     F    +N ++D LCK G+++ A EL  ++  K +VP ++ Y+ 
Sbjct: 375 ASEVANQFKEFKKMGIFFDEACYNVVMDALCKLGKVEEAVELLVEMKGKKMVPDIINYTT 434

Query: 479 MIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPE 538
           +I G   KGK+  A +    M+  G  P++VT+N L  GF +N  T + + LL+ M    
Sbjct: 435 VISGYFLKGKVVDALNIYREMKDIGHKPDIVTYNVLAGGFSRNGLTQEALSLLNYM--ET 492

Query: 539 RNLVPDDTTFSIVVDLLAKDEKYHECSAVSKSSYRACL 576
           + + PD  T +++++ L    K  +  A   +    CL
Sbjct: 493 QGVKPDTVTHNMIIEGLCIGGKVDDAQAFFDNLEEKCL 530



 Score =  148 bits (373), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 121/488 (24%), Positives = 216/488 (44%), Gaps = 60/488 (12%)

Query: 13  SETVSK------VKLSSLFKSPRQIAAVSSPETQLNEFLHENCKSGIINLNEARYFFGYM 66
            E VSK      V LSS+ +   Q+   S    Q  EF     K GI   +EA Y     
Sbjct: 348 DEMVSKGVKTNCVILSSILQGLSQMGMASEVANQFKEFK----KMGIF-FDEACY----- 397

Query: 67  THMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERG 126
                       N++  A+ K    +  +    ++    ++PD +    +I+       G
Sbjct: 398 ------------NVVMDALCKLGKVEEAVELLVEMKGKKMVPDIINYTTVIS-------G 438

Query: 127 LCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENG 186
             ++ ++ +A  +++ M   G +PD++TY  L  GF R G    AL L   M +     G
Sbjct: 439 YFLKGKVVDALNIYREMKDIGHKPDIVTYNVLAGGFSRNGLTQEALSLLNYMET----QG 494

Query: 187 LISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEE 246
           +  K +  ++++II+ LC  G VD A+  F  ++ + +       + +++G+C A +  +
Sbjct: 495 V--KPDTVTHNMIIEGLCIGGKVDDAQAFFDNLEEKCLENY----SAMVNGYCEANHVNK 548

Query: 247 VNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMD 306
              L I +   G      +F  ++  LC  G   +A  LLE M+   +NP    Y+ ++ 
Sbjct: 549 AFALLIRLSKQGRILKKASFFKLLGNLCSEGDSEKALCLLETMVALNINPTMIMYSKVIG 608

Query: 307 GYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQ 366
                G ++ A+ +F  +  +G    V++Y I+INGYC++  ++EA  +   + + G+  
Sbjct: 609 ALFQAGEMEKAQYVFNMLVDRGLAPDVITYTIMINGYCRMNKMKEAWHVLGDMKNRGIEP 668

Query: 367 TVITYNTLLS---------------GLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILID 411
            VITY  LL+                +           L+ EMK  +++PD+  Y +LID
Sbjct: 669 DVITYTVLLNNCSKIDLRSSSSSLDAMKSKENMMDPSALWSEMKDMDIKPDVICYTVLID 728

Query: 412 GLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVP 471
             CK N +Q+A+ LF+ +           +  L+ G C  G +  A  LF ++  KG+ P
Sbjct: 729 KHCKTNNIQDAINLFNEMIDRGLAPDTVTYTALLSGYCNVGNIKKAVVLFDEMLNKGIRP 788

Query: 472 TVVTYSIM 479
              T S++
Sbjct: 789 DAHTMSVL 796


>gi|302759537|ref|XP_002963191.1| hypothetical protein SELMODRAFT_80491 [Selaginella moellendorffii]
 gi|300168459|gb|EFJ35062.1| hypothetical protein SELMODRAFT_80491 [Selaginella moellendorffii]
          Length = 628

 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 146/533 (27%), Positives = 249/533 (46%), Gaps = 47/533 (8%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIG-LL 107
           CK+G   L++A+   G +        + +++++     K    D  +  ++ + S G  +
Sbjct: 84  CKAG--ELDKAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSSGGGCV 141

Query: 108 PDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGN 167
           PD +T N L+       +GLC   R+ EA  LF+ M   G  P+VI+Y TL++G C+ G 
Sbjct: 142 PDVVTFNSLL-------KGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGR 194

Query: 168 LSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPA 227
           L  A RL ++MV    E   +   ++ +Y+  +  LCK   V +A +   +M  +G    
Sbjct: 195 LDEACRLWEEMV----EKSCVP--DLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKAD 248

Query: 228 VVVCTTLIHGFCCAGNWEEVNGLFIE------MLDLGPR-----------PNLLTFNVMI 270
            V  +T+I   C  G+ EE     IE      MLD   +           P+   FN +I
Sbjct: 249 AVAFSTVIGILCKKGHAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLI 308

Query: 271 DCLCKGGKINEANGLLELMIQRGLN-----PDRFTYNSLMDGYCLVGRIDTAREIFLSMH 325
             +CK  ++   +G+L     + +      P+  TYN ++D  C   ++D A+E+   M 
Sbjct: 309 HAVCKSKRL--PDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMA 366

Query: 326 SKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAG 385
           + G    VV+Y+ L++G CK+  ++ A  L  ++   GV     T  ++L+ L +AG+  
Sbjct: 367 NYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVD 426

Query: 386 YAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLI 445
           YA    + MK     PDL TYN L+DGLCK   + EA+     +   K    +  +  +I
Sbjct: 427 YALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIII 486

Query: 446 DGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNG-C 504
             LC++G+   A  +F ++ ++G++P  V Y  ++ GL R G      D  L + K   C
Sbjct: 487 TALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLARNG----LEDLALELLKTSLC 542

Query: 505 APNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAK 557
            P+ V    ++ G  +  K     E++ +MA+       D  T+  VV  L K
Sbjct: 543 KPDFVMHKMVLDGLCKAGKAEDACEVVERMADA--GFPADAFTYISVVSGLRK 593



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 147/544 (27%), Positives = 237/544 (43%), Gaps = 63/544 (11%)

Query: 77  SFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEA 136
           ++N    A+AK          ++++   G  PD  T +I++       RGLC    + +A
Sbjct: 40  TYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFTYSIVL-------RGLCKAGELDKA 92

Query: 137 TWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSG--------------- 181
             L   +   GV+ +VITY  +I+G C+   +  AL + K M SG               
Sbjct: 93  KELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSSGGGCVPDVVTFNSLLK 152

Query: 182 ---------------DYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINP 226
                          +Y      + N+ SYS ++D LCK G +D+A  L+ EM  +   P
Sbjct: 153 GLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEKSCVP 212

Query: 227 AVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTF-----------------NVM 269
            +V  T+ + G C A    E      +M+  G + + + F                 N M
Sbjct: 213 DLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKKGHAEEAQNQM 272

Query: 270 IDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKG- 328
           I+ LC+ G ++EA    E MI R   P    +N+L+   C   R+     +F  M S   
Sbjct: 273 IEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKE 332

Query: 329 --CKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGY 386
             C   + +YNI+++  CK   ++EA  L  ++ + G+   V+TY+ L+ GL + G+   
Sbjct: 333 FYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDR 392

Query: 387 AQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLID 446
           A  L +EM    V PD  T   +++ L K   V  A+     ++       +  +N L+D
Sbjct: 393 ACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTPDLVTYNTLLD 452

Query: 447 GLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAP 506
           GLCKAGR+D A     K+      P V +Y+I+I  LCR G+   A+     M K G  P
Sbjct: 453 GLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRGVLP 512

Query: 507 NVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE-CS 565
           + V +++L+ G  +N      +ELL           PD     +V+D L K  K  + C 
Sbjct: 513 DTVLYHSLLDGLARNGLEDLALELLKTSL-----CKPDFVMHKMVLDGLCKAGKAEDACE 567

Query: 566 AVSK 569
            V +
Sbjct: 568 VVER 571



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 124/429 (28%), Positives = 205/429 (47%), Gaps = 60/429 (13%)

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
           ++F+Y+  +D+L K      A E F +M+ RG  P     + ++ G C AG  ++   L 
Sbjct: 37  SVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFTYSIVLRGLCKAGELDKAKELL 96

Query: 252 IEMLDLGPRPNLLTFNVMID-C-----------------------------------LCK 275
            ++ + G + N++T++V+ID C                                   LC 
Sbjct: 97  GQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSSGGGCVPDVVTFNSLLKGLCS 156

Query: 276 GGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVS 335
           G +++EA  L E M + G  P+  +Y++L+DG C  GR+D A  ++  M  K C   +V+
Sbjct: 157 GERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEKSCVPDLVA 216

Query: 336 YNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQ------- 388
           Y   + G CK   V EA    R++++ G +   + ++T++  L + G A  AQ       
Sbjct: 217 YTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKKGHAEEAQNQMIEHL 276

Query: 389 ----------KLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEF-- 436
                     K F+EM   N  P    +N LI  +CK+  + + V LF  ++  K EF  
Sbjct: 277 CRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMK-EFYC 335

Query: 437 --GIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKAND 494
              +E +N ++D LCKA +LD A EL +++   GL P VVTYS ++ GLC+ GKL++A D
Sbjct: 336 PPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACD 395

Query: 495 FLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDL 554
            L  M K G  P+  T  ++++   +  K    +  L  M    R   PD  T++ ++D 
Sbjct: 396 LLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETM--KARGSTPDLVTYNTLLDG 453

Query: 555 LAKDEKYHE 563
           L K  +  E
Sbjct: 454 LCKAGRIDE 462



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 122/455 (26%), Positives = 202/455 (44%), Gaps = 59/455 (12%)

Query: 55  NLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLN 114
            ++EA   F YM      P + S++ L   + K    D     + ++V    +PD +   
Sbjct: 159 RMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEKSCVPDLVAYT 218

Query: 115 ILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGT----------------- 157
             +        GLC  NR+ EA    + M+  G + D + + T                 
Sbjct: 219 SFVT-------GLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKKGHAEEAQNQ 271

Query: 158 LINGFCRTGNLSVALRLHKKMVSGDYE------NGLISKT-------------------- 191
           +I   CR+G L  A +  ++M+S ++       N LI                       
Sbjct: 272 MIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMK 331

Query: 192 ------NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWE 245
                 N+ +Y+I++D+LCK   +D+A+EL  EM   G++P VV  + L+ G C  G  +
Sbjct: 332 EFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLD 391

Query: 246 EVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLM 305
               L  EM   G  P+  T   +++ L K GK++ A   LE M  RG  PD  TYN+L+
Sbjct: 392 RACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTPDLVTYNTLL 451

Query: 306 DGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVR 365
           DG C  GRID A      M +  C   V SY I+I   C+      A +++++++  GV 
Sbjct: 452 DGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRGVL 511

Query: 366 QTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKL 425
              + Y++LL GL + G    A +L   +K    +PD   + +++DGLCK    ++A ++
Sbjct: 512 PDTVLYHSLLDGLARNGLEDLALEL---LKTSLCKPDFVMHKMVLDGLCKAGKAEDACEV 568

Query: 426 FHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWEL 460
              +    F      +  ++ GL K G++D A +L
Sbjct: 569 VERMADAGFPADAFTYISVVSGLRKLGKVDKARQL 603



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 103/359 (28%), Positives = 179/359 (49%), Gaps = 21/359 (5%)

Query: 38  ETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISF 97
           E   N+ +   C+SG+  L+EA   F  M      P    FN L  AV K++     +  
Sbjct: 266 EEAQNQMIEHLCRSGM--LDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLL 323

Query: 98  YRKLVSIGLL---PDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVIT 154
           ++++ S+      P+  T NI+++        LC   ++ EA  L   M  +G+ PDV+T
Sbjct: 324 FQRMKSMKEFYCPPNLETYNIMVD-------NLCKAKQLDEAQELVNEMANYGLSPDVVT 376

Query: 155 YGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKE 214
           Y  L++G C+ G L  A  L ++M     + G+   +  F+ + I+++L K G VD A  
Sbjct: 377 YSALVDGLCKLGKLDRACDLLEEM----SKEGVFPDS--FTDASILNALSKAGKVDYALS 430

Query: 215 LFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLC 274
               MK RG  P +V   TL+ G C AG  +E      +M+     P++ ++ ++I  LC
Sbjct: 431 HLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALC 490

Query: 275 KGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVV 334
           + G+   A+ + + M++RG+ PD   Y+SL+DG    G  D A E+   + +  CK   V
Sbjct: 491 RSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLARNGLEDLALEL---LKTSLCKPDFV 547

Query: 335 SYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDE 393
            + ++++G CK    E+A  +  ++   G      TY +++SGL + G+   A++L D+
Sbjct: 548 MHKMVLDGLCKAGKAEDACEVVERMADAGFPADAFTYISVVSGLRKLGKVDKARQLVDD 606



 Score =  149 bits (375), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 94/325 (28%), Positives = 163/325 (50%), Gaps = 19/325 (5%)

Query: 258 GPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTA 317
           G + ++ T+N  +D L K      A    + M +RG  PD FTY+ ++ G C  G +D A
Sbjct: 33  GYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFTYSIVLRGLCKAGELDKA 92

Query: 318 REIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIIS-NGVRQTVITYNTLLS 376
           +E+   +   G K  V++Y+++I+G CK   V++A+ +++ + S  G    V+T+N+LL 
Sbjct: 93  KELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSSGGGCVPDVVTFNSLLK 152

Query: 377 GLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEF 436
           GL    +   A  LF+ M     EP++ +Y+ L+DGLCK   + EA +L+  +       
Sbjct: 153 GLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEKSCVP 212

Query: 437 GIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKA-NDF 495
            +  +   + GLCKA R+  A +   K+  KG     V +S +I  LC+KG  E+A N  
Sbjct: 213 DLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKKGHAEEAQNQM 272

Query: 496 LLYMEKNGC----------------APNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPER 539
           + ++ ++G                  P+   FNTL+H   ++ +    V L  +M   + 
Sbjct: 273 IEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKE 332

Query: 540 NLVPDD-TTFSIVVDLLAKDEKYHE 563
              P +  T++I+VD L K ++  E
Sbjct: 333 FYCPPNLETYNIMVDNLCKAKQLDE 357



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 77/241 (31%), Positives = 123/241 (51%), Gaps = 2/241 (0%)

Query: 277 GKINEANGLLE-LMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVS 335
           GKI+    L + L  Q+G     FTYN  +D          A E F  M  +G      +
Sbjct: 16  GKISTIVRLFDWLGRQKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFT 75

Query: 336 YNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMK 395
           Y+I++ G CK   +++A  L  Q+  +GV+  VITY+ ++ G  +A +   A ++F  M 
Sbjct: 76  YSIVLRGLCKAGELDKAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMS 135

Query: 396 L-YNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRL 454
                 PD+ T+N L+ GLC    + EA  LF  +     E  +  ++ L+DGLCKAGRL
Sbjct: 136 SGGGCVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRL 195

Query: 455 DNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTL 514
           D A  L+ ++ +K  VP +V Y+  + GLC+  ++ +A D    M   G   + V F+T+
Sbjct: 196 DEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTV 255

Query: 515 M 515
           +
Sbjct: 256 I 256



 Score =  122 bits (305), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 70/255 (27%), Positives = 132/255 (51%), Gaps = 4/255 (1%)

Query: 311 VGRIDTAREIFLSM-HSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVI 369
           +G+I T   +F  +   KG +H+V +YN  ++   K    + A   ++Q+   G      
Sbjct: 15  LGKISTIVRLFDWLGRQKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDF 74

Query: 370 TYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHML 429
           TY+ +L GL +AG+   A++L  +++   V+ ++ TY+++IDG CK + V +A+++F  +
Sbjct: 75  TYSIVLRGLCKAGELDKAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTM 134

Query: 430 EMNKFEF-GIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGK 488
                    +  FN L+ GLC   R+  A+ LF  + + G  P V++YS ++ GLC+ G+
Sbjct: 135 SSGGGCVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGR 194

Query: 489 LEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTF 548
           L++A      M +  C P++V + + + G  + N+ ++  +   KM    +    D   F
Sbjct: 195 LDEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMV--TKGSKADAVAF 252

Query: 549 SIVVDLLAKDEKYHE 563
           S V+ +L K     E
Sbjct: 253 STVIGILCKKGHAEE 267


>gi|357151708|ref|XP_003575878.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g19890-like [Brachypodium distachyon]
          Length = 676

 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 129/437 (29%), Positives = 211/437 (48%), Gaps = 14/437 (3%)

Query: 105 GLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCR 164
           GLLPD  +   LI        G C + R++E   L   M   G   D  T   ++  FC+
Sbjct: 180 GLLPDARSFRALIV-------GCCRDGRMEEVDALLTVMQGQGFCLDNATCTVIVRVFCQ 232

Query: 165 TGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGI 224
            G       L ++M+       + +  N+ +Y+  ID LCK   V +A  +  EM  +G+
Sbjct: 233 KGRFRDVSELFRRMLE------MGTPPNVVNYTAWIDGLCKRAYVKQAFYVLEEMVAKGL 286

Query: 225 NPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGP-RPNLLTFNVMIDCLCKGGKINEAN 283
            P V   T+LI+G C  G  E    LF++++     +PN+ T+ VMI   CK GK+  A 
Sbjct: 287 KPNVYTHTSLINGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCKEGKLARAE 346

Query: 284 GLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGY 343
            LL  M+++GL P+  TY +L+ G+C  G  + A E+   M  +G +  + +YN LI+G 
Sbjct: 347 MLLGRMVEQGLAPNTNTYTTLISGHCKEGSFNCAFELMNKMRREGFQPNIYTYNALIDGL 406

Query: 344 CKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDL 403
           CK   ++EA  + R   + G++   +TY  +++   + G   YA  LF+ M      PD+
Sbjct: 407 CKKGKIQEAYKVLRMANNQGLQLDKVTYTVMITEHCKQGHITYALDLFNRMAENGCHPDI 466

Query: 404 STYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHK 463
            TY  LI   C+   ++E+ KLF      +     + +  +I G CK G+  +A  +F +
Sbjct: 467 HTYTTLIARYCQQRQMEESQKLFDKCLAIELVPTKQTYTSMIAGYCKVGKSTSALRVFER 526

Query: 464 LPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNK 523
           + Q G     +TY  +I GLC++ +LE+A      M      P  VT  TL   + +  K
Sbjct: 527 MVQNGCQADSITYGALISGLCKESRLEEARALYEGMLDKRLVPCEVTPVTLAFEYCRREK 586

Query: 524 TSKVVELLHKMAEPERN 540
               V +L ++ +  +N
Sbjct: 587 AVVAVSILDRLDKRRKN 603



 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 127/444 (28%), Positives = 212/444 (47%), Gaps = 14/444 (3%)

Query: 60  RYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINC 119
           + F G +T     P   SF  L     ++   + V +    +   G   D  T  +++  
Sbjct: 170 KVFDGMVTRGGLLPDARSFRALIVGCCRDGRMEEVDALLTVMQGQGFCLDNATCTVIVRV 229

Query: 120 FGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMV 179
           F       C + R ++ + LF+ M+  G  P+V+ Y   I+G C+   +  A  + ++MV
Sbjct: 230 F-------CQKGRFRDVSELFRRMLEMGTPPNVVNYTAWIDGLCKRAYVKQAFYVLEEMV 282

Query: 180 SGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEM-KGRGINPAVVVCTTLIHGF 238
           +     GL  K N+++++ +I+ LCK G  ++A  LFL++ K     P V   T +I G+
Sbjct: 283 A----KGL--KPNVYTHTSLINGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGY 336

Query: 239 CCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDR 298
           C  G       L   M++ G  PN  T+  +I   CK G  N A  L+  M + G  P+ 
Sbjct: 337 CKEGKLARAEMLLGRMVEQGLAPNTNTYTTLISGHCKEGSFNCAFELMNKMRREGFQPNI 396

Query: 299 FTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQ 358
           +TYN+L+DG C  G+I  A ++    +++G +   V+Y ++I  +CK  ++  A+ L+ +
Sbjct: 397 YTYNALIDGLCKKGKIQEAYKVLRMANNQGLQLDKVTYTVMITEHCKQGHITYALDLFNR 456

Query: 359 IISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNC 418
           +  NG    + TY TL++   Q  Q   +QKLFD+     + P   TY  +I G CK   
Sbjct: 457 MAENGCHPDIHTYTTLIARYCQQRQMEESQKLFDKCLAIELVPTKQTYTSMIAGYCKVGK 516

Query: 419 VQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSI 478
              A+++F  +  N  +     +  LI GLCK  RL+ A  L+  +  K LVP  VT   
Sbjct: 517 STSALRVFERMVQNGCQADSITYGALISGLCKESRLEEARALYEGMLDKRLVPCEVTPVT 576

Query: 479 MIHGLCRKGKLEKANDFLLYMEKN 502
           +    CR+ K   A   L  ++K 
Sbjct: 577 LAFEYCRREKAVVAVSILDRLDKR 600



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 119/452 (26%), Positives = 205/452 (45%), Gaps = 43/452 (9%)

Query: 132 RIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKT 191
           R+ EA  +   M + G+   V T   ++     TG+ + A ++   MV+     GL+   
Sbjct: 129 RLPEAADMVFEMRSHGLPFCVETANWVLRAGLDTGSFAYARKVFDGMVT---RGGLLPDA 185

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
              S+  +I   C++G +++   L   M+G+G       CT ++  FC  G + +V+ LF
Sbjct: 186 R--SFRALIVGCCRDGRMEEVDALLTVMQGQGFCLDNATCTVIVRVFCQKGRFRDVSELF 243

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
             ML++G  PN++ +   ID LCK   + +A  +LE M+ +GL P+ +T+ SL++G C +
Sbjct: 244 RRMLEMGTPPNVVNYTAWIDGLCKRAYVKQAFYVLEEMVAKGLKPNVYTHTSLINGLCKI 303

Query: 312 GRIDTAREIFLS------------------------------------MHSKGCKHTVVS 335
           G  + A  +FL                                     M  +G      +
Sbjct: 304 GWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNT 363

Query: 336 YNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMK 395
           Y  LI+G+CK  +   A  L  ++   G +  + TYN L+ GL + G+   A K+     
Sbjct: 364 YTTLISGHCKEGSFNCAFELMNKMRREGFQPNIYTYNALIDGLCKKGKIQEAYKVLRMAN 423

Query: 396 LYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLD 455
              ++ D  TY ++I   CK   +  A+ LF+ +  N     I  +  LI   C+  +++
Sbjct: 424 NQGLQLDKVTYTVMITEHCKQGHITYALDLFNRMAENGCHPDIHTYTTLIARYCQQRQME 483

Query: 456 NAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLM 515
            + +LF K     LVPT  TY+ MI G C+ GK   A      M +NGC  + +T+  L+
Sbjct: 484 ESQKLFDKCLAIELVPTKQTYTSMIAGYCKVGKSTSALRVFERMVQNGCQADSITYGALI 543

Query: 516 HGFLQNNKTSKVVELLHKMAEPERNLVPDDTT 547
            G  + ++  +   L   M   ++ LVP + T
Sbjct: 544 SGLCKESRLEEARALYEGML--DKRLVPCEVT 573



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 99/393 (25%), Positives = 150/393 (38%), Gaps = 63/393 (16%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           C+ G     +    F  M  M   P + ++      + K  +         ++V+ GL P
Sbjct: 231 CQKG--RFRDVSELFRRMLEMGTPPNVVNYTAWIDGLCKRAYVKQAFYVLEEMVAKGLKP 288

Query: 109 DFLTLNILINCF---GNKER--------------------------GLCVENRIKEATWL 139
           +  T   LIN     G  ER                          G C E ++  A  L
Sbjct: 289 NVYTHTSLINGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCKEGKLARAEML 348

Query: 140 FKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYE----------NGLIS 189
              M+  G+ P+  TY TLI+G C+ G+ + A  L  KM    ++          +GL  
Sbjct: 349 LGRMVEQGLAPNTNTYTTLISGHCKEGSFNCAFELMNKMRREGFQPNIYTYNALIDGLCK 408

Query: 190 KTNI-------------------FSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVV 230
           K  I                    +Y+++I   CK+G +  A +LF  M   G +P +  
Sbjct: 409 KGKIQEAYKVLRMANNQGLQLDKVTYTVMITEHCKQGHITYALDLFNRMAENGCHPDIHT 468

Query: 231 CTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMI 290
            TTLI  +C     EE   LF + L +   P   T+  MI   CK GK   A  + E M+
Sbjct: 469 YTTLIARYCQQRQMEESQKLFDKCLAIELVPTKQTYTSMIAGYCKVGKSTSALRVFERMV 528

Query: 291 QRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVE 350
           Q G   D  TY +L+ G C   R++ AR ++  M  K      V+   L   YC+     
Sbjct: 529 QNGCQADSITYGALISGLCKESRLEEARALYEGMLDKRLVPCEVTPVTLAFEYCRREKAV 588

Query: 351 EAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQ 383
            A+S+  ++       TV   N L+  L   G 
Sbjct: 589 VAVSILDRLDKRRKNHTV---NVLVRKLSAIGH 618



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 56/223 (25%), Positives = 107/223 (47%), Gaps = 2/223 (0%)

Query: 339 LINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLY- 397
           ++  + +   + EA  +  ++ S+G+   V T N +L      G   YA+K+FD M    
Sbjct: 120 MVAAFAEAGRLPEAADMVFEMRSHGLPFCVETANWVLRAGLDTGSFAYARKVFDGMVTRG 179

Query: 398 NVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNA 457
            + PD  ++  LI G C++  ++E   L  +++   F         ++   C+ GR  + 
Sbjct: 180 GLLPDARSFRALIVGCCRDGRMEEVDALLTVMQGQGFCLDNATCTVIVRVFCQKGRFRDV 239

Query: 458 WELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHG 517
            ELF ++ + G  P VV Y+  I GLC++  +++A   L  M   G  PNV T  +L++G
Sbjct: 240 SELFRRMLEMGTPPNVVNYTAWIDGLCKRAYVKQAFYVLEEMVAKGLKPNVYTHTSLING 299

Query: 518 FLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEK 560
             +   T +   L  K+ +   +  P+  T+++++    K+ K
Sbjct: 300 LCKIGWTERAFRLFLKLIKSS-SYKPNVHTYTVMIGGYCKEGK 341


>gi|224136626|ref|XP_002322376.1| predicted protein [Populus trichocarpa]
 gi|222869372|gb|EEF06503.1| predicted protein [Populus trichocarpa]
          Length = 715

 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 139/527 (26%), Positives = 243/527 (46%), Gaps = 23/527 (4%)

Query: 48  NCKSGIIN----LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVS 103
           NC +G+      +  A   F  M      P   S+ L+  A  +         + + +V 
Sbjct: 200 NCVTGVAGEMGLVGYAENVFDEMRVRGVCPDSVSYKLMAIAYCRMGRISDTDRWLKDMVR 259

Query: 104 IGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFC 163
            G + D  T  ++I+ F       C +       W F   +  G++P++I + +LING C
Sbjct: 260 RGFVVDNATCTLMISTF-------CEKGFASRVFWYFDKWVELGLKPNLINFTSLINGLC 312

Query: 164 RTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEM-KGR 222
           + G++  A  + ++MV   +      K N+++++ +ID LCK+G  +KA  LFL++ +  
Sbjct: 313 KRGSIKQAFEMLEEMVKKGW------KPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSD 366

Query: 223 GINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEA 282
              P V   T++IHG+C          L   M + G  PN  T+  +ID   K G   +A
Sbjct: 367 DYKPNVHTYTSMIHGYCKEDKLNRAEMLLSRMKEQGLVPNTKTYTCLIDGHSKAGNFEKA 426

Query: 283 NGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILING 342
             L++LM + G + + FTYN+ +D  C  GR   A ++       G +   V+Y ILI+ 
Sbjct: 427 YELMDLMGKEGFSANIFTYNAFIDSLCKKGRFLEACKLLKKGFRLGLQADTVTYTILISE 486

Query: 343 YCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPD 402
            C+  +  EA+  + ++   GV+  + TYNTL++   +  +   ++KLF E     + P 
Sbjct: 487 LCRRADTREALVFFSKMFKAGVQPDMHTYNTLIAAFSRQRRMEESEKLFAEAVGLGLVPT 546

Query: 403 LSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFH 462
             TY  +I G C++  V  A+K F+ +  +        +  LI GLCK  +LD A +L+ 
Sbjct: 547 KETYTSMICGYCRDRNVSLALKFFNRMSDHGCTPDSLTYGALISGLCKESKLDEACQLYE 606

Query: 463 KLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNN 522
            +  KGL P  VT   + +  C++     A   ++ +E+      + T NTL+       
Sbjct: 607 AMVDKGLSPCEVTRLTLAYEYCKQDDSATA---MVILERLDKKLWIRTVNTLIRKLCSER 663

Query: 523 KTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSK 569
           K    V   HK+ + ++N+  D  T +       +  KY   S +S+
Sbjct: 664 KVGMAVLFFHKLLDKDQNV--DRVTLTAFTTACYESNKYALVSDLSE 708



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 81/331 (24%), Positives = 157/331 (47%), Gaps = 3/331 (0%)

Query: 234 LIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRG 293
           ++  F   G ++E   + IEM + G    + T N +     + G +  A  + + M  RG
Sbjct: 167 MVRVFAEIGKFQEAVNMVIEMENHGLVLTVRTLNCVTGVAGEMGLVGYAENVFDEMRVRG 226

Query: 294 LNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAM 353
           + PD  +Y  +   YC +GRI         M  +G      +  ++I+ +C+        
Sbjct: 227 VCPDSVSYKLMAIAYCRMGRISDTDRWLKDMVRRGFVVDNATCTLMISTFCEKGFASRVF 286

Query: 354 SLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGL 413
             + + +  G++  +I + +L++GL + G    A ++ +EM     +P++ T+  LIDGL
Sbjct: 287 WYFDKWVELGLKPNLINFTSLINGLCKRGSIKQAFEMLEEMVKKGWKPNVYTHTALIDGL 346

Query: 414 CKNNCVQEAVKLF-HMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPT 472
           CK    ++A +LF  ++  + ++  +  +  +I G CK  +L+ A  L  ++ ++GLVP 
Sbjct: 347 CKKGWTEKAFRLFLKLVRSDDYKPNVHTYTSMIHGYCKEDKLNRAEMLLSRMKEQGLVPN 406

Query: 473 VVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLH 532
             TY+ +I G  + G  EKA + +  M K G + N+ T+N  +    +  +  +  +LL 
Sbjct: 407 TKTYTCLIDGHSKAGNFEKAYELMDLMGKEGFSANIFTYNAFIDSLCKKGRFLEACKLLK 466

Query: 533 KMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
           K       L  D  T++I++  L +     E
Sbjct: 467 KGF--RLGLQADTVTYTILISELCRRADTRE 495


>gi|240254074|ref|NP_172820.4| PPR repeat-containing protein [Arabidopsis thaliana]
 gi|332190928|gb|AEE29049.1| PPR repeat-containing protein [Arabidopsis thaliana]
          Length = 806

 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 150/554 (27%), Positives = 257/554 (46%), Gaps = 32/554 (5%)

Query: 18  KVKLSSLFKSPRQIAAVSSPETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISS 77
           K++ + LF    +   +       N  +   CK G +++  A+ FF  +      P + S
Sbjct: 202 KLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDM--AKSFFCTVLKCGLVPSVYS 259

Query: 78  FNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEAT 137
            N+L   +         +     +   G+ PD +T NIL        +G  +   I  A 
Sbjct: 260 HNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNIL-------AKGFHLLGMISGAW 312

Query: 138 WLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYS 197
            + ++M+  G+ PDVITY  L+ G C+ GN+ + L L K M+S  +E       +I   S
Sbjct: 313 EVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFE-----LNSIIPCS 367

Query: 198 IIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDL 257
           +++  LCK G +D+A  LF +MK  G++P +V  + +IHG C  G ++    L+ EM D 
Sbjct: 368 VMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDK 427

Query: 258 GPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTA 317
              PN  T   ++  LC+ G + EA  LL+ +I  G   D   YN ++DGY   G I+ A
Sbjct: 428 RILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEA 487

Query: 318 REIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSG 377
            E+F  +   G   +V ++N LI GYCK  N+ EA  +   I   G+  +V++Y TL+  
Sbjct: 488 LELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDA 547

Query: 378 LFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCK-------NNCVQEAVKLFHMLE 430
               G      +L  EMK   + P   TY+++  GLC+       N+ ++E  ++F   +
Sbjct: 548 YANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRE--RIFEKCK 605

Query: 431 MNKFEFGIE-------IFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGL 483
               +   E        +N +I  LC+   L  A+     +  + L  +  TY+I+I  L
Sbjct: 606 QGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSL 665

Query: 484 CRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVP 543
           C  G + KA+ F+  +++   + +   + TL+            V+L H++     N+  
Sbjct: 666 CVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSI 725

Query: 544 DDTTFSIVVDLLAK 557
            D  +S V++ L +
Sbjct: 726 RD--YSAVINRLCR 737



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 120/415 (28%), Positives = 217/415 (52%), Gaps = 9/415 (2%)

Query: 154 TYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAK 213
           TY T+++G CR   L  A+   +     D         ++ S++ I+   CK G VD AK
Sbjct: 189 TYSTVVDGLCRQQKLEDAVLFLRTSEWKDI------GPSVVSFNSIMSGYCKLGFVDMAK 242

Query: 214 ELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCL 273
             F  +   G+ P+V     LI+G C  G+  E   L  +M   G  P+ +T+N++    
Sbjct: 243 SFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGF 302

Query: 274 CKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCK-HT 332
              G I+ A  ++  M+ +GL+PD  TY  L+ G C +G ID    +   M S+G + ++
Sbjct: 303 HLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNS 362

Query: 333 VVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFD 392
           ++  +++++G CK   ++EA+SL+ Q+ ++G+   ++ Y+ ++ GL + G+   A  L+D
Sbjct: 363 IIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYD 422

Query: 393 EMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAG 452
           EM    + P+  T+  L+ GLC+   + EA  L   L  +     I ++N +IDG  K+G
Sbjct: 423 EMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSG 482

Query: 453 RLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFN 512
            ++ A ELF  + + G+ P+V T++ +I+G C+   + +A   L  ++  G AP+VV++ 
Sbjct: 483 CIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYT 542

Query: 513 TLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAV 567
           TLM  +     T  + EL  +M      + P + T+S++   L +  K+  C+ V
Sbjct: 543 TLMDAYANCGNTKSIDELRREM--KAEGIPPTNVTYSVIFKGLCRGWKHENCNHV 595



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 133/482 (27%), Positives = 223/482 (46%), Gaps = 64/482 (13%)

Query: 126 GLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYEN 185
           GLC + ++++A    +      + P V+++ ++++G+C+ G + +A    K       + 
Sbjct: 196 GLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMA----KSFFCTVLKC 251

Query: 186 GLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGF----CCA 241
           GL+   +++S++I+I+ LC  G + +A EL  +M   G+ P  V    L  GF      +
Sbjct: 252 GLVP--SVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMIS 309

Query: 242 GNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTY 301
           G WE +     +MLD G  P+++T+ +++   C+ G I+    LL+ M+ RG   +    
Sbjct: 310 GAWEVIR----DMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIP 365

Query: 302 NSLM-DGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQII 360
            S+M  G C  GRID A  +F  M + G    +V+Y+I+I+G CK+   + A+ LY ++ 
Sbjct: 366 CSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMC 425

Query: 361 SNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQ 420
              +     T+  LL GL Q G    A+ L D +       D+  YNI+IDG  K+ C++
Sbjct: 426 DKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIE 485

Query: 421 EAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAW---------------------- 458
           EA++LF ++        +  FN LI G CK   +  A                       
Sbjct: 486 EALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLM 545

Query: 459 -------------ELFHKLPQKGLVPTVVTYSIMIHGLCRKGK------------LEKAN 493
                        EL  ++  +G+ PT VTYS++  GLCR  K             EK  
Sbjct: 546 DAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCK 605

Query: 494 DFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
             L  ME  G  P+ +T+NT++    +    S     L  M    RNL     T++I++D
Sbjct: 606 QGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIM--KSRNLDASSATYNILID 663

Query: 554 LL 555
            L
Sbjct: 664 SL 665



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 119/427 (27%), Positives = 201/427 (47%), Gaps = 24/427 (5%)

Query: 72  SPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVEN 131
           SP + ++ +L     +  + D  +   + ++S G       LN +I C      GLC   
Sbjct: 324 SPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGF-----ELNSIIPC-SVMLSGLCKTG 377

Query: 132 RIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKT 191
           RI EA  LF  M A G+ PD++ Y  +I+G C+ G   +AL L+ +M             
Sbjct: 378 RIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRI------LP 431

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
           N  ++  ++  LC++G++ +A+ L   +   G    +V+   +I G+  +G  EE   LF
Sbjct: 432 NSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELF 491

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
             +++ G  P++ TFN +I   CK   I EA  +L+++   GL P   +Y +LMD Y   
Sbjct: 492 KVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANC 551

Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQII----------- 360
           G   +  E+   M ++G   T V+Y+++  G C+    E    + R+ I           
Sbjct: 552 GNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDM 611

Query: 361 -SNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCV 419
            S G+    ITYNT++  L +      A    + MK  N++   +TYNILID LC    +
Sbjct: 612 ESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYI 671

Query: 420 QEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIM 479
           ++A    + L+          +  LI   C  G  + A +LFH+L  +G   ++  YS +
Sbjct: 672 RKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAV 731

Query: 480 IHGLCRK 486
           I+ LCR+
Sbjct: 732 INRLCRR 738



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 96/381 (25%), Positives = 176/381 (46%), Gaps = 27/381 (7%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CK+G I+  EA   F  M     SP + +++++   + K   +D  +  Y ++    +LP
Sbjct: 374 CKTGRID--EALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILP 431

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           +  T   L+        GLC +  + EA  L  ++I+ G   D++ Y  +I+G+ ++G +
Sbjct: 432 NSRTHGALL-------LGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCI 484

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
             AL L K ++    E G+    ++ +++ +I   CK   + +A+++   +K  G+ P+V
Sbjct: 485 EEALELFKVVI----ETGITP--SVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSV 538

Query: 229 VVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLEL 288
           V  TTL+  +   GN + ++ L  EM   G  P  +T++V+   LC+G K    N +L  
Sbjct: 539 VSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRE 598

Query: 289 MI------------QRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSY 336
            I              G+ PD+ TYN+++   C V  +  A      M S+    +  +Y
Sbjct: 599 RIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATY 658

Query: 337 NILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKL 396
           NILI+  C    + +A S    +    V  +   Y TL+      G    A KLF ++  
Sbjct: 659 NILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLH 718

Query: 397 YNVEPDLSTYNILIDGLCKNN 417
                 +  Y+ +I+ LC+ +
Sbjct: 719 RGFNVSIRDYSAVINRLCRRH 739



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 80/322 (24%), Positives = 144/322 (44%), Gaps = 26/322 (8%)

Query: 24  LFKSPRQIAAVSSPETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFG 83
           LFK   +     S  T  N  ++  CK+   N+ EAR     +     +P + S+  L  
Sbjct: 490 LFKVVIETGITPSVAT-FNSLIYGYCKTQ--NIAEARKILDVIKLYGLAPSVVSYTTLMD 546

Query: 84  AVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILIN--CFGNKERG---LCVENRIKEATW 138
           A A   +  ++    R++ + G+ P  +T +++    C G K      +  E   ++   
Sbjct: 547 AYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQ 606

Query: 139 LFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSI 198
             ++M + G+ PD ITY T+I   CR  +LS A    + M S + +       +  +Y+I
Sbjct: 607 GLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLD------ASSATYNI 660

Query: 199 IIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLG 258
           +IDSLC  G + KA      ++ + ++ +    TTLI   C  G+ E    LF ++L  G
Sbjct: 661 LIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRG 720

Query: 259 PRPNLLTFNVMIDCLCKGGKIN----EANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRI 314
              ++  ++ +I+ LC+   +N    ++NG+  L+     N   F Y  ++   C    +
Sbjct: 721 FNVSIRDYSAVINRLCRRHLMNCFPGQSNGVCCLIS----NERSFVYCPILSANCRRHTL 776

Query: 315 DTAR---EIFLSMHSK-GCKHT 332
              +   E+ L M S+ G K T
Sbjct: 777 SVEKLSHEVLLKMKSQLGQKRT 798


>gi|334182559|ref|NP_001184987.1| PPR repeat-containing protein [Arabidopsis thaliana]
 gi|332190929|gb|AEE29050.1| PPR repeat-containing protein [Arabidopsis thaliana]
          Length = 798

 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 150/554 (27%), Positives = 257/554 (46%), Gaps = 32/554 (5%)

Query: 18  KVKLSSLFKSPRQIAAVSSPETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISS 77
           K++ + LF    +   +       N  +   CK G +++  A+ FF  +      P + S
Sbjct: 202 KLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDM--AKSFFCTVLKCGLVPSVYS 259

Query: 78  FNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEAT 137
            N+L   +         +     +   G+ PD +T NIL        +G  +   I  A 
Sbjct: 260 HNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNIL-------AKGFHLLGMISGAW 312

Query: 138 WLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYS 197
            + ++M+  G+ PDVITY  L+ G C+ GN+ + L L K M+S  +E       +I   S
Sbjct: 313 EVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFE-----LNSIIPCS 367

Query: 198 IIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDL 257
           +++  LCK G +D+A  LF +MK  G++P +V  + +IHG C  G ++    L+ EM D 
Sbjct: 368 VMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDK 427

Query: 258 GPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTA 317
              PN  T   ++  LC+ G + EA  LL+ +I  G   D   YN ++DGY   G I+ A
Sbjct: 428 RILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEA 487

Query: 318 REIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSG 377
            E+F  +   G   +V ++N LI GYCK  N+ EA  +   I   G+  +V++Y TL+  
Sbjct: 488 LELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDA 547

Query: 378 LFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCK-------NNCVQEAVKLFHMLE 430
               G      +L  EMK   + P   TY+++  GLC+       N+ ++E  ++F   +
Sbjct: 548 YANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRE--RIFEKCK 605

Query: 431 MNKFEFGIE-------IFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGL 483
               +   E        +N +I  LC+   L  A+     +  + L  +  TY+I+I  L
Sbjct: 606 QGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSL 665

Query: 484 CRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVP 543
           C  G + KA+ F+  +++   + +   + TL+            V+L H++     N+  
Sbjct: 666 CVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSI 725

Query: 544 DDTTFSIVVDLLAK 557
            D  +S V++ L +
Sbjct: 726 RD--YSAVINRLCR 737



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 120/415 (28%), Positives = 217/415 (52%), Gaps = 9/415 (2%)

Query: 154 TYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAK 213
           TY T+++G CR   L  A+   +     D         ++ S++ I+   CK G VD AK
Sbjct: 189 TYSTVVDGLCRQQKLEDAVLFLRTSEWKDI------GPSVVSFNSIMSGYCKLGFVDMAK 242

Query: 214 ELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCL 273
             F  +   G+ P+V     LI+G C  G+  E   L  +M   G  P+ +T+N++    
Sbjct: 243 SFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGF 302

Query: 274 CKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCK-HT 332
              G I+ A  ++  M+ +GL+PD  TY  L+ G C +G ID    +   M S+G + ++
Sbjct: 303 HLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNS 362

Query: 333 VVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFD 392
           ++  +++++G CK   ++EA+SL+ Q+ ++G+   ++ Y+ ++ GL + G+   A  L+D
Sbjct: 363 IIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYD 422

Query: 393 EMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAG 452
           EM    + P+  T+  L+ GLC+   + EA  L   L  +     I ++N +IDG  K+G
Sbjct: 423 EMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSG 482

Query: 453 RLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFN 512
            ++ A ELF  + + G+ P+V T++ +I+G C+   + +A   L  ++  G AP+VV++ 
Sbjct: 483 CIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYT 542

Query: 513 TLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAV 567
           TLM  +     T  + EL  +M      + P + T+S++   L +  K+  C+ V
Sbjct: 543 TLMDAYANCGNTKSIDELRREM--KAEGIPPTNVTYSVIFKGLCRGWKHENCNHV 595



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 133/482 (27%), Positives = 223/482 (46%), Gaps = 64/482 (13%)

Query: 126 GLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYEN 185
           GLC + ++++A    +      + P V+++ ++++G+C+ G + +A    K       + 
Sbjct: 196 GLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMA----KSFFCTVLKC 251

Query: 186 GLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGF----CCA 241
           GL+   +++S++I+I+ LC  G + +A EL  +M   G+ P  V    L  GF      +
Sbjct: 252 GLVP--SVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMIS 309

Query: 242 GNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTY 301
           G WE +     +MLD G  P+++T+ +++   C+ G I+    LL+ M+ RG   +    
Sbjct: 310 GAWEVIR----DMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIP 365

Query: 302 NSLM-DGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQII 360
            S+M  G C  GRID A  +F  M + G    +V+Y+I+I+G CK+   + A+ LY ++ 
Sbjct: 366 CSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMC 425

Query: 361 SNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQ 420
              +     T+  LL GL Q G    A+ L D +       D+  YNI+IDG  K+ C++
Sbjct: 426 DKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIE 485

Query: 421 EAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAW---------------------- 458
           EA++LF ++        +  FN LI G CK   +  A                       
Sbjct: 486 EALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLM 545

Query: 459 -------------ELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLY------- 498
                        EL  ++  +G+ PT VTYS++  GLCR  K E  N  L         
Sbjct: 546 DAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCK 605

Query: 499 -----MEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
                ME  G  P+ +T+NT++    +    S     L  M    RNL     T++I++D
Sbjct: 606 QGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIM--KSRNLDASSATYNILID 663

Query: 554 LL 555
            L
Sbjct: 664 SL 665



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 119/427 (27%), Positives = 201/427 (47%), Gaps = 24/427 (5%)

Query: 72  SPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVEN 131
           SP + ++ +L     +  + D  +   + ++S G       LN +I C      GLC   
Sbjct: 324 SPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGF-----ELNSIIPC-SVMLSGLCKTG 377

Query: 132 RIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKT 191
           RI EA  LF  M A G+ PD++ Y  +I+G C+ G   +AL L+ +M             
Sbjct: 378 RIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRI------LP 431

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
           N  ++  ++  LC++G++ +A+ L   +   G    +V+   +I G+  +G  EE   LF
Sbjct: 432 NSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELF 491

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
             +++ G  P++ TFN +I   CK   I EA  +L+++   GL P   +Y +LMD Y   
Sbjct: 492 KVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANC 551

Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQII----------- 360
           G   +  E+   M ++G   T V+Y+++  G C+    E    + R+ I           
Sbjct: 552 GNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDM 611

Query: 361 -SNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCV 419
            S G+    ITYNT++  L +      A    + MK  N++   +TYNILID LC    +
Sbjct: 612 ESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYI 671

Query: 420 QEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIM 479
           ++A    + L+          +  LI   C  G  + A +LFH+L  +G   ++  YS +
Sbjct: 672 RKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAV 731

Query: 480 IHGLCRK 486
           I+ LCR+
Sbjct: 732 INRLCRR 738



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 95/381 (24%), Positives = 176/381 (46%), Gaps = 27/381 (7%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CK+G   ++EA   F  M     SP + +++++   + K   +D  +  Y ++    +LP
Sbjct: 374 CKTG--RIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILP 431

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           +  T   L+        GLC +  + EA  L  ++I+ G   D++ Y  +I+G+ ++G +
Sbjct: 432 NSRTHGALL-------LGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCI 484

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
             AL L K ++    E G+    ++ +++ +I   CK   + +A+++   +K  G+ P+V
Sbjct: 485 EEALELFKVVI----ETGITP--SVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSV 538

Query: 229 VVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLEL 288
           V  TTL+  +   GN + ++ L  EM   G  P  +T++V+   LC+G K    N +L  
Sbjct: 539 VSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRE 598

Query: 289 MI------------QRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSY 336
            I              G+ PD+ TYN+++   C V  +  A      M S+    +  +Y
Sbjct: 599 RIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATY 658

Query: 337 NILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKL 396
           NILI+  C    + +A S    +    V  +   Y TL+      G    A KLF ++  
Sbjct: 659 NILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLH 718

Query: 397 YNVEPDLSTYNILIDGLCKNN 417
                 +  Y+ +I+ LC+ +
Sbjct: 719 RGFNVSIRDYSAVINRLCRRH 739



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 73/295 (24%), Positives = 133/295 (45%), Gaps = 22/295 (7%)

Query: 24  LFKSPRQIAAVSSPETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFG 83
           LFK   +     S  T  N  ++  CK+   N+ EAR     +     +P + S+  L  
Sbjct: 490 LFKVVIETGITPSVAT-FNSLIYGYCKTQ--NIAEARKILDVIKLYGLAPSVVSYTTLMD 546

Query: 84  AVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILIN--CFGNKERG---LCVENRIKEATW 138
           A A   +  ++    R++ + G+ P  +T +++    C G K      +  E   ++   
Sbjct: 547 AYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQ 606

Query: 139 LFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSI 198
             ++M + G+ PD ITY T+I   CR  +LS A    + M S + +       +  +Y+I
Sbjct: 607 GLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLD------ASSATYNI 660

Query: 199 IIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLG 258
           +IDSLC  G + KA      ++ + ++ +    TTLI   C  G+ E    LF ++L  G
Sbjct: 661 LIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRG 720

Query: 259 PRPNLLTFNVMIDCLCKGGKIN----EANGLLELMIQRGLNPDRFTYNSLMDGYC 309
              ++  ++ +I+ LC+   +N    ++NG+  L+     N   F Y  ++   C
Sbjct: 721 FNVSIRDYSAVINRLCRRHLMNCFPGQSNGVCCLIS----NERSFVYCPILSANC 771


>gi|224086982|ref|XP_002308024.1| predicted protein [Populus trichocarpa]
 gi|222854000|gb|EEE91547.1| predicted protein [Populus trichocarpa]
          Length = 789

 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 132/488 (27%), Positives = 231/488 (47%), Gaps = 61/488 (12%)

Query: 76  SSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKE 135
            +F +L     K    D  +  +  +      PD  T N++++    K       N +  
Sbjct: 127 DAFFVLIKVYLKMGLTDKAMETFGSMRDFDCTPDVYTYNMILDVLIQK-------NFLLL 179

Query: 136 ATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFS 195
           A  ++  M+     P+V T+  LI+G C++GN+  AL L  +M     + G++   + F+
Sbjct: 180 ALTVYTRMMKLNCLPNVATFSILIDGLCKSGNVKDALHLFDEMT----QRGILP--DAFT 233

Query: 196 YSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCC--------------- 240
           Y ++I  LC+   VD A  LF +MK  G+ P  V C  L++GFC                
Sbjct: 234 YCVVISGLCRSKRVDDAYRLFDKMKDSGVGPDFVTCNALLNGFCMLDRVDEAFSLLRLFE 293

Query: 241 --------------------AGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKIN 280
                               A  +E+V  L+ +M++   +P++  + +M+  L + GK+ 
Sbjct: 294 KDGYVLDVRGYSCLIRGLFRAKRYEDVQLLYRKMIEDNVKPDVYLYTIMMKGLAEAGKVR 353

Query: 281 EANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILI 340
           +A  LL  M + G+ PD   YN L+ G+C +G +  AR + L +    C   V +Y+ILI
Sbjct: 354 DALELLNEMTESGVVPDTVCYNVLIKGFCDMGLLSEARSLQLEISRHDCFPNVKTYSILI 413

Query: 341 NGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKL---- 396
           +G C+     +A  ++ ++   G   + +T+N+L+ GL + GQ   A  LF +M++    
Sbjct: 414 SGMCRNGLTRDAQEIFNEMEKLGCYPSAVTFNSLIDGLCKTGQLEKAHLLFYKMEIGRNP 473

Query: 397 -----YNVEP----DLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDG 447
                 +  P    D ++   +++ LC +  + +A ++   L  +    GI  +N L++G
Sbjct: 474 SLFLRLSQGPSHVLDSASLQKMVEQLCDSGLIHKAYRILMQLADSGDAPGIYTYNILVNG 533

Query: 448 LCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPN 507
            CK G  + A++LF ++  KGL P  VTY  +I+GL R  + E A      MEKNGC P+
Sbjct: 534 FCKLGNFNGAYKLFREMQFKGLSPDTVTYGTLINGLLRFQREEDAYKVFDQMEKNGCTPD 593

Query: 508 VVTFNTLM 515
              + T+M
Sbjct: 594 AAVYRTMM 601



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 138/539 (25%), Positives = 230/539 (42%), Gaps = 101/539 (18%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CKSG  N+ +A + F  MT     P   ++ ++   + +++  D     + K+   G+ P
Sbjct: 207 CKSG--NVKDALHLFDEMTQRGILPDAFTYCVVISGLCRSKRVDDAYRLFDKMKDSGVGP 264

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           DF+T N L+N       G C+ +R+ EA  L +     G   DV  Y  LI G  R    
Sbjct: 265 DFVTCNALLN-------GFCMLDRVDEAFSLLRLFEKDGYVLDVRGYSCLIRGLFRAKRY 317

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
                L++KM+  +       K +++ Y+I++  L + G V  A EL  EM   G+ P  
Sbjct: 318 EDVQLLYRKMIEDNV------KPDVYLYTIMMKGLAEAGKVRDALELLNEMTESGVVPDT 371

Query: 229 VVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLEL 288
           V    LI GFC  G   E   L +E+      PN+ T++++I  +C+ G   +A  +   
Sbjct: 372 VCYNVLIKGFCDMGLLSEARSLQLEISRHDCFPNVKTYSILISGMCRNGLTRDAQEIFNE 431

Query: 289 MIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMH-----------SKGCKHT----- 332
           M + G  P   T+NSL+DG C  G+++ A  +F  M            S+G  H      
Sbjct: 432 MEKLGCYPSAVTFNSLIDGLCKTGQLEKAHLLFYKMEIGRNPSLFLRLSQGPSHVLDSAS 491

Query: 333 --------------------------------VVSYNILINGYCKILNVEEAMSLYRQII 360
                                           + +YNIL+NG+CK+ N   A  L+R++ 
Sbjct: 492 LQKMVEQLCDSGLIHKAYRILMQLADSGDAPGIYTYNILVNGFCKLGNFNGAYKLFREMQ 551

Query: 361 SNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQ 420
             G+    +TY TL++GL +  +   A K+FD+M+     PD + Y  ++  +C+   + 
Sbjct: 552 FKGLSPDTVTYGTLINGLLRFQREEDAYKVFDQMEKNGCTPDAAVYRTMMTWMCRRMELP 611

Query: 421 EAVKLF--------------------------------HMLEM----NKFEFGIEIFNCL 444
            A  L+                                 +LEM    N F+ G   +   
Sbjct: 612 RAFSLWLKYLRNIRSQEDEAIKAIEGYFEKQEVEKAVRGLLEMDFKLNDFDLG--PYAIW 669

Query: 445 IDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNG 503
           + GLC+  R+  A ++F  L +  +V T      +I+ L ++G L++A D  LY  + G
Sbjct: 670 LIGLCQTRRVGEALKIFLILEEYKVVITPPCCVKLIYFLLKEGDLDRAIDVFLYTIEKG 728



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 114/426 (26%), Positives = 204/426 (47%), Gaps = 54/426 (12%)

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
           ++++Y++I+D L ++  +  A  ++  M      P V   + LI G C +GN ++   LF
Sbjct: 160 DVYTYNMILDVLIQKNFLLLALTVYTRMMKLNCLPNVATFSILIDGLCKSGNVKDALHLF 219

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
            EM   G  P+  T+ V+I  LC+  ++++A  L + M   G+ PD  T N+L++G+C++
Sbjct: 220 DEMTQRGILPDAFTYCVVISGLCRSKRVDDAYRLFDKMKDSGVGPDFVTCNALLNGFCML 279

Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
            R+D A  +       G    V  Y+ LI G  +    E+   LYR++I + V+  V  Y
Sbjct: 280 DRVDEAFSLLRLFEKDGYVLDVRGYSCLIRGLFRAKRYEDVQLLYRKMIEDNVKPDVYLY 339

Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
             ++ GL +AG+   A +L +EM    V PD   YN+LI G C    + EA  L   LE+
Sbjct: 340 TIMMKGLAEAGKVRDALELLNEMTESGVVPDTVCYNVLIKGFCDMGLLSEARSL--QLEI 397

Query: 432 NKFEF--GIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKL 489
           ++ +    ++ ++ LI G+C+ G   +A E+F+++ + G  P+ VT++ +I GLC+ G+L
Sbjct: 398 SRHDCFPNVKTYSILISGMCRNGLTRDAQEIFNEMEKLGCYPSAVTFNSLIDGLCKTGQL 457

Query: 490 EKANDFLLYME------------------------------------------------K 501
           EKA+     ME                                                 
Sbjct: 458 EKAHLLFYKMEIGRNPSLFLRLSQGPSHVLDSASLQKMVEQLCDSGLIHKAYRILMQLAD 517

Query: 502 NGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKY 561
           +G AP + T+N L++GF +    +   +L  +M    + L PD  T+  +++ L + ++ 
Sbjct: 518 SGDAPGIYTYNILVNGFCKLGNFNGAYKLFREMQ--FKGLSPDTVTYGTLINGLLRFQRE 575

Query: 562 HECSAV 567
            +   V
Sbjct: 576 EDAYKV 581



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 105/337 (31%), Positives = 158/337 (46%), Gaps = 35/337 (10%)

Query: 233 TLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFN------------------------- 267
            LI  +   G  ++    F  M D    P++ T+N                         
Sbjct: 131 VLIKVYLKMGLTDKAMETFGSMRDFDCTPDVYTYNMILDVLIQKNFLLLALTVYTRMMKL 190

Query: 268 ----------VMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTA 317
                     ++ID LCK G + +A  L + M QRG+ PD FTY  ++ G C   R+D A
Sbjct: 191 NCLPNVATFSILIDGLCKSGNVKDALHLFDEMTQRGILPDAFTYCVVISGLCRSKRVDDA 250

Query: 318 REIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSG 377
             +F  M   G     V+ N L+NG+C +  V+EA SL R    +G    V  Y+ L+ G
Sbjct: 251 YRLFDKMKDSGVGPDFVTCNALLNGFCMLDRVDEAFSLLRLFEKDGYVLDVRGYSCLIRG 310

Query: 378 LFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFG 437
           LF+A +    Q L+ +M   NV+PD+  Y I++ GL +   V++A++L + +  +     
Sbjct: 311 LFRAKRYEDVQLLYRKMIEDNVKPDVYLYTIMMKGLAEAGKVRDALELLNEMTESGVVPD 370

Query: 438 IEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLL 497
              +N LI G C  G L  A  L  ++ +    P V TYSI+I G+CR G    A +   
Sbjct: 371 TVCYNVLIKGFCDMGLLSEARSLQLEISRHDCFPNVKTYSILISGMCRNGLTRDAQEIFN 430

Query: 498 YMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKM 534
            MEK GC P+ VTFN+L+ G  +  +  K   L +KM
Sbjct: 431 EMEKLGCYPSAVTFNSLIDGLCKTGQLEKAHLLFYKM 467



 Score =  142 bits (357), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 86/288 (29%), Positives = 146/288 (50%), Gaps = 2/288 (0%)

Query: 265 TFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSM 324
            F V+I    K G  ++A      M      PD +TYN ++D       +  A  ++  M
Sbjct: 128 AFFVLIKVYLKMGLTDKAMETFGSMRDFDCTPDVYTYNMILDVLIQKNFLLLALTVYTRM 187

Query: 325 HSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQA 384
               C   V +++ILI+G CK  NV++A+ L+ ++   G+     TY  ++SGL ++ + 
Sbjct: 188 MKLNCLPNVATFSILIDGLCKSGNVKDALHLFDEMTQRGILPDAFTYCVVISGLCRSKRV 247

Query: 385 GYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCL 444
             A +LFD+MK   V PD  T N L++G C  + V EA  L  + E + +   +  ++CL
Sbjct: 248 DDAYRLFDKMKDSGVGPDFVTCNALLNGFCMLDRVDEAFSLLRLFEKDGYVLDVRGYSCL 307

Query: 445 IDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGC 504
           I GL +A R ++   L+ K+ +  + P V  Y+IM+ GL   GK+  A + L  M ++G 
Sbjct: 308 IRGLFRAKRYEDVQLLYRKMIEDNVKPDVYLYTIMMKGLAEAGKVRDALELLNEMTESGV 367

Query: 505 APNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVV 552
            P+ V +N L+ GF      S+   L  ++     +  P+  T+SI++
Sbjct: 368 VPDTVCYNVLIKGFCDMGLLSEARSL--QLEISRHDCFPNVKTYSILI 413


>gi|357529169|sp|Q9LMY5.3|PPR41_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g13630
          Length = 826

 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 150/554 (27%), Positives = 257/554 (46%), Gaps = 32/554 (5%)

Query: 18  KVKLSSLFKSPRQIAAVSSPETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISS 77
           K++ + LF    +   +       N  +   CK G +++  A+ FF  +      P + S
Sbjct: 244 KLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDM--AKSFFCTVLKCGLVPSVYS 301

Query: 78  FNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEAT 137
            N+L   +         +     +   G+ PD +T NIL        +G  +   I  A 
Sbjct: 302 HNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNIL-------AKGFHLLGMISGAW 354

Query: 138 WLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYS 197
            + ++M+  G+ PDVITY  L+ G C+ GN+ + L L K M+S  +E       +I   S
Sbjct: 355 EVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFE-----LNSIIPCS 409

Query: 198 IIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDL 257
           +++  LCK G +D+A  LF +MK  G++P +V  + +IHG C  G ++    L+ EM D 
Sbjct: 410 VMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDK 469

Query: 258 GPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTA 317
              PN  T   ++  LC+ G + EA  LL+ +I  G   D   YN ++DGY   G I+ A
Sbjct: 470 RILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEA 529

Query: 318 REIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSG 377
            E+F  +   G   +V ++N LI GYCK  N+ EA  +   I   G+  +V++Y TL+  
Sbjct: 530 LELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDA 589

Query: 378 LFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCK-------NNCVQEAVKLFHMLE 430
               G      +L  EMK   + P   TY+++  GLC+       N+ ++E  ++F   +
Sbjct: 590 YANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRE--RIFEKCK 647

Query: 431 MNKFEFGIE-------IFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGL 483
               +   E        +N +I  LC+   L  A+     +  + L  +  TY+I+I  L
Sbjct: 648 QGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSL 707

Query: 484 CRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVP 543
           C  G + KA+ F+  +++   + +   + TL+            V+L H++     N+  
Sbjct: 708 CVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSI 767

Query: 544 DDTTFSIVVDLLAK 557
            D  +S V++ L +
Sbjct: 768 RD--YSAVINRLCR 779



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 120/415 (28%), Positives = 217/415 (52%), Gaps = 9/415 (2%)

Query: 154 TYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAK 213
           TY T+++G CR   L  A+   +     D         ++ S++ I+   CK G VD AK
Sbjct: 231 TYSTVVDGLCRQQKLEDAVLFLRTSEWKDI------GPSVVSFNSIMSGYCKLGFVDMAK 284

Query: 214 ELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCL 273
             F  +   G+ P+V     LI+G C  G+  E   L  +M   G  P+ +T+N++    
Sbjct: 285 SFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGF 344

Query: 274 CKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCK-HT 332
              G I+ A  ++  M+ +GL+PD  TY  L+ G C +G ID    +   M S+G + ++
Sbjct: 345 HLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNS 404

Query: 333 VVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFD 392
           ++  +++++G CK   ++EA+SL+ Q+ ++G+   ++ Y+ ++ GL + G+   A  L+D
Sbjct: 405 IIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYD 464

Query: 393 EMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAG 452
           EM    + P+  T+  L+ GLC+   + EA  L   L  +     I ++N +IDG  K+G
Sbjct: 465 EMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSG 524

Query: 453 RLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFN 512
            ++ A ELF  + + G+ P+V T++ +I+G C+   + +A   L  ++  G AP+VV++ 
Sbjct: 525 CIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYT 584

Query: 513 TLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAV 567
           TLM  +     T  + EL  +M      + P + T+S++   L +  K+  C+ V
Sbjct: 585 TLMDAYANCGNTKSIDELRREM--KAEGIPPTNVTYSVIFKGLCRGWKHENCNHV 637



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 133/482 (27%), Positives = 223/482 (46%), Gaps = 64/482 (13%)

Query: 126 GLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYEN 185
           GLC + ++++A    +      + P V+++ ++++G+C+ G + +A    K       + 
Sbjct: 238 GLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMA----KSFFCTVLKC 293

Query: 186 GLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGF----CCA 241
           GL+   +++S++I+I+ LC  G + +A EL  +M   G+ P  V    L  GF      +
Sbjct: 294 GLV--PSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMIS 351

Query: 242 GNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTY 301
           G WE +     +MLD G  P+++T+ +++   C+ G I+    LL+ M+ RG   +    
Sbjct: 352 GAWEVIR----DMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIP 407

Query: 302 NSLM-DGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQII 360
            S+M  G C  GRID A  +F  M + G    +V+Y+I+I+G CK+   + A+ LY ++ 
Sbjct: 408 CSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMC 467

Query: 361 SNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQ 420
              +     T+  LL GL Q G    A+ L D +       D+  YNI+IDG  K+ C++
Sbjct: 468 DKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIE 527

Query: 421 EAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAW---------------------- 458
           EA++LF ++        +  FN LI G CK   +  A                       
Sbjct: 528 EALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLM 587

Query: 459 -------------ELFHKLPQKGLVPTVVTYSIMIHGLCRKGK------------LEKAN 493
                        EL  ++  +G+ PT VTYS++  GLCR  K             EK  
Sbjct: 588 DAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCK 647

Query: 494 DFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
             L  ME  G  P+ +T+NT++    +    S     L  M    RNL     T++I++D
Sbjct: 648 QGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIM--KSRNLDASSATYNILID 705

Query: 554 LL 555
            L
Sbjct: 706 SL 707



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 123/449 (27%), Positives = 211/449 (46%), Gaps = 24/449 (5%)

Query: 72  SPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVEN 131
           SP + ++ +L     +  + D  +   + ++S G       LN +I C      GLC   
Sbjct: 366 SPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGF-----ELNSIIPC-SVMLSGLCKTG 419

Query: 132 RIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKT 191
           RI EA  LF  M A G+ PD++ Y  +I+G C+ G   +AL L+ +M             
Sbjct: 420 RIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRI------LP 473

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
           N  ++  ++  LC++G++ +A+ L   +   G    +V+   +I G+  +G  EE   LF
Sbjct: 474 NSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELF 533

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
             +++ G  P++ TFN +I   CK   I EA  +L+++   GL P   +Y +LMD Y   
Sbjct: 534 KVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANC 593

Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQII----------- 360
           G   +  E+   M ++G   T V+Y+++  G C+    E    + R+ I           
Sbjct: 594 GNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDM 653

Query: 361 -SNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCV 419
            S G+    ITYNT++  L +      A    + MK  N++   +TYNILID LC    +
Sbjct: 654 ESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYI 713

Query: 420 QEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIM 479
           ++A    + L+          +  LI   C  G  + A +LFH+L  +G   ++  YS +
Sbjct: 714 RKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAV 773

Query: 480 IHGLCRKGKLEKANDFLLYMEKNGCAPNV 508
           I+ LCR+  + ++  F   M   G +P++
Sbjct: 774 INRLCRRHLVNESKFFFCLMLSQGISPDL 802



 Score =  122 bits (305), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 100/404 (24%), Positives = 175/404 (43%), Gaps = 52/404 (12%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CK+G   ++EA   F  M     SP + +++++   + K   +D  +  Y ++    +LP
Sbjct: 416 CKTG--RIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILP 473

Query: 109 DFLTLNILINCFGNKERGLCVENR------------------------------IKEATW 138
           +  T   L+   G  ++G+ +E R                              I+EA  
Sbjct: 474 NSRTHGALL--LGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALE 531

Query: 139 LFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSI 198
           LFK +I  G+ P V T+ +LI G+C+T N++ A    +K++      GL    ++ SY+ 
Sbjct: 532 LFKVVIETGITPSVATFNSLIYGYCKTQNIAEA----RKILDVIKLYGL--APSVVSYTT 585

Query: 199 IIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIE----- 253
           ++D+    G      EL  EMK  GI P  V  + +  G C     E  N +  E     
Sbjct: 586 LMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEK 645

Query: 254 -------MLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMD 306
                  M   G  P+ +T+N +I  LC+   ++ A   LE+M  R L+    TYN L+D
Sbjct: 646 CKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILID 705

Query: 307 GYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQ 366
             C+ G I  A     S+  +    +  +Y  LI  +C   + E A+ L+ Q++  G   
Sbjct: 706 SLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNV 765

Query: 367 TVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILI 410
           ++  Y+ +++ L +      ++  F  M    + PDL    ++I
Sbjct: 766 SIRDYSAVINRLCRRHLVNESKFFFCLMLSQGISPDLDICEVMI 809


>gi|8920567|gb|AAF81289.1|AC027656_6 Contains similarity to a hypothetical protein F23N19.4 gi|6630464
           from Arabidopsis thaliana BAC F23N19 gb|AC007190. It
           contains a PPR repeat domain PF|01535 [Arabidopsis
           thaliana]
          Length = 797

 Score =  205 bits (522), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 150/554 (27%), Positives = 257/554 (46%), Gaps = 32/554 (5%)

Query: 18  KVKLSSLFKSPRQIAAVSSPETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISS 77
           K++ + LF    +   +       N  +   CK G +++  A+ FF  +      P + S
Sbjct: 215 KLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDM--AKSFFCTVLKCGLVPSVYS 272

Query: 78  FNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEAT 137
            N+L   +         +     +   G+ PD +T NIL        +G  +   I  A 
Sbjct: 273 HNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNIL-------AKGFHLLGMISGAW 325

Query: 138 WLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYS 197
            + ++M+  G+ PDVITY  L+ G C+ GN+ + L L K M+S  +E       +I   S
Sbjct: 326 EVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFE-----LNSIIPCS 380

Query: 198 IIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDL 257
           +++  LCK G +D+A  LF +MK  G++P +V  + +IHG C  G ++    L+ EM D 
Sbjct: 381 VMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDK 440

Query: 258 GPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTA 317
              PN  T   ++  LC+ G + EA  LL+ +I  G   D   YN ++DGY   G I+ A
Sbjct: 441 RILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEA 500

Query: 318 REIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSG 377
            E+F  +   G   +V ++N LI GYCK  N+ EA  +   I   G+  +V++Y TL+  
Sbjct: 501 LELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDA 560

Query: 378 LFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCK-------NNCVQEAVKLFHMLE 430
               G      +L  EMK   + P   TY+++  GLC+       N+ ++E  ++F   +
Sbjct: 561 YANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRE--RIFEKCK 618

Query: 431 MNKFEFGIE-------IFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGL 483
               +   E        +N +I  LC+   L  A+     +  + L  +  TY+I+I  L
Sbjct: 619 QGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSL 678

Query: 484 CRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVP 543
           C  G + KA+ F+  +++   + +   + TL+            V+L H++     N+  
Sbjct: 679 CVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSI 738

Query: 544 DDTTFSIVVDLLAK 557
            D  +S V++ L +
Sbjct: 739 RD--YSAVINRLCR 750



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 120/415 (28%), Positives = 217/415 (52%), Gaps = 9/415 (2%)

Query: 154 TYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAK 213
           TY T+++G CR   L  A+   +     D         ++ S++ I+   CK G VD AK
Sbjct: 202 TYSTVVDGLCRQQKLEDAVLFLRTSEWKDI------GPSVVSFNSIMSGYCKLGFVDMAK 255

Query: 214 ELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCL 273
             F  +   G+ P+V     LI+G C  G+  E   L  +M   G  P+ +T+N++    
Sbjct: 256 SFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGF 315

Query: 274 CKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCK-HT 332
              G I+ A  ++  M+ +GL+PD  TY  L+ G C +G ID    +   M S+G + ++
Sbjct: 316 HLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNS 375

Query: 333 VVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFD 392
           ++  +++++G CK   ++EA+SL+ Q+ ++G+   ++ Y+ ++ GL + G+   A  L+D
Sbjct: 376 IIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYD 435

Query: 393 EMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAG 452
           EM    + P+  T+  L+ GLC+   + EA  L   L  +     I ++N +IDG  K+G
Sbjct: 436 EMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSG 495

Query: 453 RLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFN 512
            ++ A ELF  + + G+ P+V T++ +I+G C+   + +A   L  ++  G AP+VV++ 
Sbjct: 496 CIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYT 555

Query: 513 TLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAV 567
           TLM  +     T  + EL  +M      + P + T+S++   L +  K+  C+ V
Sbjct: 556 TLMDAYANCGNTKSIDELRREM--KAEGIPPTNVTYSVIFKGLCRGWKHENCNHV 608



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 133/482 (27%), Positives = 223/482 (46%), Gaps = 64/482 (13%)

Query: 126 GLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYEN 185
           GLC + ++++A    +      + P V+++ ++++G+C+ G + +A    K       + 
Sbjct: 209 GLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMA----KSFFCTVLKC 264

Query: 186 GLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGF----CCA 241
           GL+   +++S++I+I+ LC  G + +A EL  +M   G+ P  V    L  GF      +
Sbjct: 265 GLV--PSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMIS 322

Query: 242 GNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTY 301
           G WE +     +MLD G  P+++T+ +++   C+ G I+    LL+ M+ RG   +    
Sbjct: 323 GAWEVIR----DMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIP 378

Query: 302 NSLM-DGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQII 360
            S+M  G C  GRID A  +F  M + G    +V+Y+I+I+G CK+   + A+ LY ++ 
Sbjct: 379 CSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMC 438

Query: 361 SNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQ 420
              +     T+  LL GL Q G    A+ L D +       D+  YNI+IDG  K+ C++
Sbjct: 439 DKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIE 498

Query: 421 EAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAW---------------------- 458
           EA++LF ++        +  FN LI G CK   +  A                       
Sbjct: 499 EALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLM 558

Query: 459 -------------ELFHKLPQKGLVPTVVTYSIMIHGLCRKGK------------LEKAN 493
                        EL  ++  +G+ PT VTYS++  GLCR  K             EK  
Sbjct: 559 DAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCK 618

Query: 494 DFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
             L  ME  G  P+ +T+NT++    +    S     L  M    RNL     T++I++D
Sbjct: 619 QGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIM--KSRNLDASSATYNILID 676

Query: 554 LL 555
            L
Sbjct: 677 SL 678



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 123/449 (27%), Positives = 211/449 (46%), Gaps = 24/449 (5%)

Query: 72  SPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVEN 131
           SP + ++ +L     +  + D  +   + ++S G       LN +I C      GLC   
Sbjct: 337 SPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGF-----ELNSIIPC-SVMLSGLCKTG 390

Query: 132 RIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKT 191
           RI EA  LF  M A G+ PD++ Y  +I+G C+ G   +AL L+ +M             
Sbjct: 391 RIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRI------LP 444

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
           N  ++  ++  LC++G++ +A+ L   +   G    +V+   +I G+  +G  EE   LF
Sbjct: 445 NSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELF 504

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
             +++ G  P++ TFN +I   CK   I EA  +L+++   GL P   +Y +LMD Y   
Sbjct: 505 KVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANC 564

Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQII----------- 360
           G   +  E+   M ++G   T V+Y+++  G C+    E    + R+ I           
Sbjct: 565 GNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDM 624

Query: 361 -SNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCV 419
            S G+    ITYNT++  L +      A    + MK  N++   +TYNILID LC    +
Sbjct: 625 ESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYI 684

Query: 420 QEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIM 479
           ++A    + L+          +  LI   C  G  + A +LFH+L  +G   ++  YS +
Sbjct: 685 RKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAV 744

Query: 480 IHGLCRKGKLEKANDFLLYMEKNGCAPNV 508
           I+ LCR+  + ++  F   M   G +P++
Sbjct: 745 INRLCRRHLVNESKFFFCLMLSQGISPDL 773



 Score =  121 bits (304), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 100/404 (24%), Positives = 175/404 (43%), Gaps = 52/404 (12%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CK+G   ++EA   F  M     SP + +++++   + K   +D  +  Y ++    +LP
Sbjct: 387 CKTG--RIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILP 444

Query: 109 DFLTLNILINCFGNKERGLCVENR------------------------------IKEATW 138
           +  T   L+   G  ++G+ +E R                              I+EA  
Sbjct: 445 NSRTHGALL--LGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALE 502

Query: 139 LFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSI 198
           LFK +I  G+ P V T+ +LI G+C+T N++ A    +K++      GL    ++ SY+ 
Sbjct: 503 LFKVVIETGITPSVATFNSLIYGYCKTQNIAEA----RKILDVIKLYGL--APSVVSYTT 556

Query: 199 IIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIE----- 253
           ++D+    G      EL  EMK  GI P  V  + +  G C     E  N +  E     
Sbjct: 557 LMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEK 616

Query: 254 -------MLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMD 306
                  M   G  P+ +T+N +I  LC+   ++ A   LE+M  R L+    TYN L+D
Sbjct: 617 CKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILID 676

Query: 307 GYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQ 366
             C+ G I  A     S+  +    +  +Y  LI  +C   + E A+ L+ Q++  G   
Sbjct: 677 SLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNV 736

Query: 367 TVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILI 410
           ++  Y+ +++ L +      ++  F  M    + PDL    ++I
Sbjct: 737 SIRDYSAVINRLCRRHLVNESKFFFCLMLSQGISPDLDICEVMI 780


>gi|357121428|ref|XP_003562422.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
           mitochondrial-like [Brachypodium distachyon]
          Length = 663

 Score =  205 bits (521), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 131/428 (30%), Positives = 219/428 (51%), Gaps = 15/428 (3%)

Query: 77  SFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEA 136
           +++    A+ ++   + V      +  +G  PD    NI I         LC +NR+ +A
Sbjct: 230 TYSRWISALCQSNRIELVQELLVDMDKLGCSPDIWACNIYIYY-------LCKQNRLPDA 282

Query: 137 TWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSY 196
             + + M   G  PDV+TY T+++G C     + A+ L ++MV  D       K ++FS 
Sbjct: 283 LQMVEKMRTKGTSPDVVTYQTVVSGLCDNKKFAEAIGLWEEMVKRDL------KPDVFSC 336

Query: 197 SIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLD 256
             +I  LCK   VD+A EL   M    I  +V +   LI GF  AG+ ++   +   M  
Sbjct: 337 GALIFGLCKNNKVDEAFELASRMLTLDIELSVCIYNALISGFWRAGSIDKAYKIISFMRT 396

Query: 257 LGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDT 316
            G  P+++T+N++++  C  G + +A  L+  M   G+NPDR++YN L+ G C   ++D 
Sbjct: 397 NGCEPDIVTYNILLNHYCTIGMMEKAEKLIRKMETSGVNPDRYSYNQLLKGLCKTHQLDK 456

Query: 317 AREIFLSMHSK-GCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLL 375
           A   F+S H + G     VS NILI+ +CK   V+ A+ L++++   G++   +TY TL+
Sbjct: 457 AFA-FVSDHMEVGGFCDTVSCNILIDAFCKTKKVKSALELFKEMGYKGMQADAVTYGTLI 515

Query: 376 SGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFE 435
           +GLF  G    A++LF++M    ++P+++ YNI++  LCK    + A  +F  +   +  
Sbjct: 516 NGLFSVGYYNLAEELFEQMLNAQIDPNVNLYNIMLHHLCKVGHFKRAQTIFSHMIQKEVS 575

Query: 436 FGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDF 495
                FN LI  L K  R   A  LF  +  +G+ P  +T+  +I GL  +GK   A + 
Sbjct: 576 PDTVTFNTLIYWLGKRSRAIEALNLFKDMRTRGVEPDTLTFKYLISGLLDEGKSTLAYEV 635

Query: 496 LLYMEKNG 503
             YM +NG
Sbjct: 636 WEYMMENG 643



 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 119/459 (25%), Positives = 204/459 (44%), Gaps = 13/459 (2%)

Query: 78  FNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEAT 137
           +N   G + KN  +D V  +Y   ++ G      T +  I+        LC  NRI+   
Sbjct: 196 YNRYIGVLVKNCCFDLVEKYYDMALAKGFCLTPFTYSRWIS-------ALCQSNRIELVQ 248

Query: 138 WLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYS 197
            L  +M   G  PD+      I   C+   L  AL++ +KM +        +  ++ +Y 
Sbjct: 249 ELLVDMDKLGCSPDIWACNIYIYYLCKQNRLPDALQMVEKMRTKG------TSPDVVTYQ 302

Query: 198 IIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDL 257
            ++  LC      +A  L+ EM  R + P V  C  LI G C     +E   L   ML L
Sbjct: 303 TVVSGLCDNKKFAEAIGLWEEMVKRDLKPDVFSCGALIFGLCKNNKVDEAFELASRMLTL 362

Query: 258 GPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTA 317
               ++  +N +I    + G I++A  ++  M   G  PD  TYN L++ YC +G ++ A
Sbjct: 363 DIELSVCIYNALISGFWRAGSIDKAYKIISFMRTNGCEPDIVTYNILLNHYCTIGMMEKA 422

Query: 318 REIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSG 377
            ++   M + G      SYN L+ G CK   +++A +     +  G     ++ N L+  
Sbjct: 423 EKLIRKMETSGVNPDRYSYNQLLKGLCKTHQLDKAFAFVSDHMEVGGFCDTVSCNILIDA 482

Query: 378 LFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFG 437
             +  +   A +LF EM    ++ D  TY  LI+GL        A +LF  +   + +  
Sbjct: 483 FCKTKKVKSALELFKEMGYKGMQADAVTYGTLINGLFSVGYYNLAEELFEQMLNAQIDPN 542

Query: 438 IEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLL 497
           + ++N ++  LCK G    A  +F  + QK + P  VT++ +I+ L ++ +  +A +   
Sbjct: 543 VNLYNIMLHHLCKVGHFKRAQTIFSHMIQKEVSPDTVTFNTLIYWLGKRSRAIEALNLFK 602

Query: 498 YMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAE 536
            M   G  P+ +TF  L+ G L   K++   E+   M E
Sbjct: 603 DMRTRGVEPDTLTFKYLISGLLDEGKSTLAYEVWEYMME 641



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 108/372 (29%), Positives = 183/372 (49%), Gaps = 6/372 (1%)

Query: 194 FSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIE 253
           F+YS  I +LC+   ++  +EL ++M   G +P +  C   I+  C      +   +  +
Sbjct: 229 FTYSRWISALCQSNRIELVQELLVDMDKLGCSPDIWACNIYIYYLCKQNRLPDALQMVEK 288

Query: 254 MLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGR 313
           M   G  P+++T+  ++  LC   K  EA GL E M++R L PD F+  +L+ G C   +
Sbjct: 289 MRTKGTSPDVVTYQTVVSGLCDNKKFAEAIGLWEEMVKRDLKPDVFSCGALIFGLCKNNK 348

Query: 314 IDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNT 373
           +D A E+   M +   + +V  YN LI+G+ +  ++++A  +   + +NG    ++TYN 
Sbjct: 349 VDEAFELASRMLTLDIELSVCIYNALISGFWRAGSIDKAYKIISFMRTNGCEPDIVTYNI 408

Query: 374 LLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLF--HMLEM 431
           LL+     G    A+KL  +M+   V PD  +YN L+ GLCK + + +A      HM E+
Sbjct: 409 LLNHYCTIGMMEKAEKLIRKMETSGVNPDRYSYNQLLKGLCKTHQLDKAFAFVSDHM-EV 467

Query: 432 NKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEK 491
             F   +   N LID  CK  ++ +A ELF ++  KG+    VTY  +I+GL   G    
Sbjct: 468 GGFCDTVSC-NILIDAFCKTKKVKSALELFKEMGYKGMQADAVTYGTLINGLFSVGYYNL 526

Query: 492 ANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIV 551
           A +    M      PNV  +N ++H   +     +   +   M + E  + PD  TF+ +
Sbjct: 527 AEELFEQMLNAQIDPNVNLYNIMLHHLCKVGHFKRAQTIFSHMIQKE--VSPDTVTFNTL 584

Query: 552 VDLLAKDEKYHE 563
           +  L K  +  E
Sbjct: 585 IYWLGKRSRAIE 596



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 102/372 (27%), Positives = 181/372 (48%), Gaps = 15/372 (4%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
           N +++  CK     L +A      M     SP + ++  +   +  N+ +   I  + ++
Sbjct: 267 NIYIYYLCKQN--RLPDALQMVEKMRTKGTSPDVVTYQTVVSGLCDNKKFAEAIGLWEEM 324

Query: 102 VSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLING 161
           V   L PD  +   LI        GLC  N++ EA  L   M+   +   V  Y  LI+G
Sbjct: 325 VKRDLKPDVFSCGALIF-------GLCKNNKVDEAFELASRMLTLDIELSVCIYNALISG 377

Query: 162 FCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKG 221
           F R G++  A     K++S    NG   + +I +Y+I+++  C  G+++KA++L  +M+ 
Sbjct: 378 FWRAGSIDKAY----KIISFMRTNG--CEPDIVTYNILLNHYCTIGMMEKAEKLIRKMET 431

Query: 222 RGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINE 281
            G+NP       L+ G C     ++      + +++G   + ++ N++ID  CK  K+  
Sbjct: 432 SGVNPDRYSYNQLLKGLCKTHQLDKAFAFVSDHMEVGGFCDTVSCNILIDAFCKTKKVKS 491

Query: 282 ANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILIN 341
           A  L + M  +G+  D  TY +L++G   VG  + A E+F  M +      V  YNI+++
Sbjct: 492 ALELFKEMGYKGMQADAVTYGTLINGLFSVGYYNLAEELFEQMLNAQIDPNVNLYNIMLH 551

Query: 342 GYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEP 401
             CK+ + + A +++  +I   V    +T+NTL+  L +  +A  A  LF +M+   VEP
Sbjct: 552 HLCKVGHFKRAQTIFSHMIQKEVSPDTVTFNTLIYWLGKRSRAIEALNLFKDMRTRGVEP 611

Query: 402 DLSTYNILIDGL 413
           D  T+  LI GL
Sbjct: 612 DTLTFKYLISGL 623



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 98/367 (26%), Positives = 176/367 (47%), Gaps = 2/367 (0%)

Query: 194 FSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIE 253
           F+ + ++  L  +G      E    +K +G+     +   L+ G+  AG ++ V   F E
Sbjct: 124 FAIAYLVSLLFMDGNFALLSEFLGRVKSQGVALHRSLYRILLSGYVRAGKFDSVIETFDE 183

Query: 254 MLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGR 313
           M+  G R   + +N  I  L K    +      ++ + +G     FTY+  +   C   R
Sbjct: 184 MVMSGCREFGVDYNRYIGVLVKNCCFDLVEKYYDMALAKGFCLTPFTYSRWISALCQSNR 243

Query: 314 IDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNT 373
           I+  +E+ + M   GC   + + NI I   CK   + +A+ +  ++ + G    V+TY T
Sbjct: 244 IELVQELLVDMDKLGCSPDIWACNIYIYYLCKQNRLPDALQMVEKMRTKGTSPDVVTYQT 303

Query: 374 LLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNK 433
           ++SGL    +   A  L++EM   +++PD+ +   LI GLCKNN V EA +L   +    
Sbjct: 304 VVSGLCDNKKFAEAIGLWEEMVKRDLKPDVFSCGALIFGLCKNNKVDEAFELASRMLTLD 363

Query: 434 FEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKAN 493
            E  + I+N LI G  +AG +D A+++   +   G  P +VTY+I+++  C  G +EKA 
Sbjct: 364 IELSVCIYNALISGFWRAGSIDKAYKIISFMRTNGCEPDIVTYNILLNHYCTIGMMEKAE 423

Query: 494 DFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
             +  ME +G  P+  ++N L+ G  + ++  K    +    E       D  + +I++D
Sbjct: 424 KLIRKMETSGVNPDRYSYNQLLKGLCKTHQLDKAFAFVSDHMEV--GGFCDTVSCNILID 481

Query: 554 LLAKDEK 560
              K +K
Sbjct: 482 AFCKTKK 488



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 76/346 (21%), Positives = 136/346 (39%), Gaps = 76/346 (21%)

Query: 293 GLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEA 352
           G +  +F    L+    + G      E    + S+G       Y IL++GY +    +  
Sbjct: 118 GFDHSQFAIAYLVSLLFMDGNFALLSEFLGRVKSQGVALHRSLYRILLSGYVRAGKFDSV 177

Query: 353 MSLYRQIISNGVRQ-----------------------------------TVITYNTLLSG 377
           +  + +++ +G R+                                   T  TY+  +S 
Sbjct: 178 IETFDEMVMSGCREFGVDYNRYIGVLVKNCCFDLVEKYYDMALAKGFCLTPFTYSRWISA 237

Query: 378 LFQAGQAGYAQKLFDEMKLYNVEPDLS--------------------------------- 404
           L Q+ +    Q+L  +M      PD+                                  
Sbjct: 238 LCQSNRIELVQELLVDMDKLGCSPDIWACNIYIYYLCKQNRLPDALQMVEKMRTKGTSPD 297

Query: 405 --TYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNC--LIDGLCKAGRLDNAWEL 460
             TY  ++ GLC N    EA+ L+   EM K +   ++F+C  LI GLCK  ++D A+EL
Sbjct: 298 VVTYQTVVSGLCDNKKFAEAIGLWE--EMVKRDLKPDVFSCGALIFGLCKNNKVDEAFEL 355

Query: 461 FHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQ 520
             ++    +  +V  Y+ +I G  R G ++KA   + +M  NGC P++VT+N L++ +  
Sbjct: 356 ASRMLTLDIELSVCIYNALISGFWRAGSIDKAYKIISFMRTNGCEPDIVTYNILLNHYCT 415

Query: 521 NNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSA 566
                K  +L+ KM     N  PD  +++ ++  L K  +  +  A
Sbjct: 416 IGMMEKAEKLIRKMETSGVN--PDRYSYNQLLKGLCKTHQLDKAFA 459


>gi|302763357|ref|XP_002965100.1| hypothetical protein SELMODRAFT_83796 [Selaginella moellendorffii]
 gi|300167333|gb|EFJ33938.1| hypothetical protein SELMODRAFT_83796 [Selaginella moellendorffii]
          Length = 603

 Score =  205 bits (521), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 116/426 (27%), Positives = 222/426 (52%), Gaps = 13/426 (3%)

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
           + +A   F++ I+    P+V ++  L+ GF    +  V   L ++M S     G+ S  N
Sbjct: 112 LSDALGFFQSSIS---EPNVSSFNILLRGFAARDDFEVVNALLREMKS----RGITS--N 162

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
             ++ +I+ +LC    +DKA   F  +      P +   T L+ G C A   E    +F 
Sbjct: 163 GATHGVILSALCARRDLDKAVSYFNSVSPNKCEPTLFTYTVLVDGLCKAHKVERACDVFE 222

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
           EM+  G +P+++ ++ +ID L K G+++EA  L++LM+ RG  P    Y S++ G C  G
Sbjct: 223 EMIRKGYKPDIIAYSSLIDGLSKAGRVDEARKLVDLMVARGPPPTAVAYTSIVAGLCKCG 282

Query: 313 RIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYN 372
           RI  A +    M  +  +  V +Y+ ++ GY  +  VE+A ++  ++         I+Y 
Sbjct: 283 RIQEAVKTIQEMRRRRLRPRVDTYSFIVTGYIGMGKVEKAFAVMEEMADRDCAPDTISYT 342

Query: 373 TLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMN 432
             +  L+  G+   A+K+F+ M     +PD+ TY I+ID  CK   +  A  +  +++  
Sbjct: 343 MFIEALYSIGRREEAEKVFETMVEKGCKPDMHTYGIIIDNFCKEGSMAAATHVLRLMDKA 402

Query: 433 KFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKA 492
             +    I+  ++DG  K+ RL+ A EL+ ++ + G++P+ VTY+ +I+ LC+  K+++A
Sbjct: 403 AVKPNRYIYTMIMDGFVKSSRLEEALELYQRILKDGILPSTVTYNTVINALCKLKKMDEA 462

Query: 493 NDFLLYME--KNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSI 550
            + L  M+  K    P++VT++ ++HG  +     +  +LL +M   +  ++PD  T++ 
Sbjct: 463 LELLREMQRRKEELEPSIVTYSMIIHGLGKVGMEERAFDLLAEMI--DNGVIPDCFTYTS 520

Query: 551 VVDLLA 556
           ++  LA
Sbjct: 521 LIQTLA 526



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 133/501 (26%), Positives = 230/501 (45%), Gaps = 52/501 (10%)

Query: 63  FGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGN 122
            G+       P +SSFN+L    A    ++ V +  R++ S G+  +  T  ++++    
Sbjct: 116 LGFFQSSISEPNVSSFNILLRGFAARDDFEVVNALLREMKSRGITSNGATHGVILS---- 171

Query: 123 KERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGD 182
               LC    + +A   F ++      P + TY  L++G C+   +  A  + ++M+   
Sbjct: 172 ---ALCARRDLDKAVSYFNSVSPNKCEPTLFTYTVLVDGLCKAHKVERACDVFEEMIRKG 228

Query: 183 YENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAG 242
           Y      K +I +YS +ID L K G VD+A++L   M  RG  P  V  T+++ G C  G
Sbjct: 229 Y------KPDIIAYSSLIDGLSKAGRVDEARKLVDLMVARGPPPTAVAYTSIVAGLCKCG 282

Query: 243 NWEE-----------------------VNG------------LFIEMLDLGPRPNLLTFN 267
             +E                       V G            +  EM D    P+ +++ 
Sbjct: 283 RIQEAVKTIQEMRRRRLRPRVDTYSFIVTGYIGMGKVEKAFAVMEEMADRDCAPDTISYT 342

Query: 268 VMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSK 327
           + I+ L   G+  EA  + E M+++G  PD  TY  ++D +C  G +  A  +   M   
Sbjct: 343 MFIEALYSIGRREEAEKVFETMVEKGCKPDMHTYGIIIDNFCKEGSMAAATHVLRLMDKA 402

Query: 328 GCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYA 387
             K     Y ++++G+ K   +EEA+ LY++I+ +G+  + +TYNT+++ L +  +   A
Sbjct: 403 AVKPNRYIYTMIMDGFVKSSRLEEALELYQRILKDGILPSTVTYNTVINALCKLKKMDEA 462

Query: 388 QKLFDEMKLYN--VEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLI 445
            +L  EM+     +EP + TY+++I GL K    + A  L   +  N        +  LI
Sbjct: 463 LELLREMQRRKEELEPSIVTYSMIIHGLGKVGMEERAFDLLAEMIDNGVIPDCFTYTSLI 522

Query: 446 DGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCA 505
             L  AG++  A EL  ++ + G+ P   TY  ++  LCR   ++ A D L  M +NG  
Sbjct: 523 QTLAGAGKVSRAMELLEEMLKAGIFPDDHTYGTLVQILCR-SDVDAAWDLLQEMMRNGHT 581

Query: 506 PNVVTFNTLMHGF-LQNNKTS 525
           PN  TF  +  GF LQ ++ S
Sbjct: 582 PNEFTFKAVEKGFRLQLDRLS 602



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 106/466 (22%), Positives = 194/466 (41%), Gaps = 86/466 (18%)

Query: 55  NLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLN 114
           +L++A  +F  ++  +  P + ++ +L   + K    +     + +++  G  PD +  +
Sbjct: 178 DLDKAVSYFNSVSPNKCEPTLFTYTVLVDGLCKAHKVERACDVFEEMIRKGYKPDIIAYS 237

Query: 115 ILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRL 174
            LI+       GL    R+ EA  L   M+A G  P  + Y +++ G C+ G +  A++ 
Sbjct: 238 SLID-------GLSKAGRVDEARKLVDLMVARGPPPTAVAYTSIVAGLCKCGRIQEAVKT 290

Query: 175 HKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTL 234
            ++M           +  + +YS I+      G V+KA  +  EM  R   P  +  T  
Sbjct: 291 IQEMRR------RRLRPRVDTYSFIVTGYIGMGKVEKAFAVMEEMADRDCAPDTISYTMF 344

Query: 235 IHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGL 294
           I      G  EE   +F  M++ G +P++ T+ ++ID  CK G +  A  +L LM +  +
Sbjct: 345 IEALYSIGRREEAEKVFETMVEKGCKPDMHTYGIIIDNFCKEGSMAAATHVLRLMDKAAV 404

Query: 295 NPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKG---------------CK--------- 330
            P+R+ Y  +MDG+    R++ A E++  +   G               CK         
Sbjct: 405 KPNRYIYTMIMDGFVKSSRLEEALELYQRILKDGILPSTVTYNTVINALCKLKKMDEALE 464

Query: 331 -------------HTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSG 377
                         ++V+Y+++I+G  K+   E A  L  ++I NGV     TY +L+  
Sbjct: 465 LLREMQRRKEELEPSIVTYSMIIHGLGKVGMEERAFDLLAEMIDNGVIPDCFTYTSLIQT 524

Query: 378 LFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFG 437
           L  AG+   A +L +EM    + PD  TY  L+  LC+++                    
Sbjct: 525 LAGAGKVSRAMELLEEMLKAGIFPDDHTYGTLVQILCRSD-------------------- 564

Query: 438 IEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGL 483
                           +D AW+L  ++ + G  P   T+  +  G 
Sbjct: 565 ----------------VDAAWDLLQEMMRNGHTPNEFTFKAVEKGF 594



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 79/298 (26%), Positives = 141/298 (47%), Gaps = 19/298 (6%)

Query: 51  SGIINLNEARYFFGYMTHMQP---SPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLL 107
           +G I + +    F  M  M     +P   S+ +   A+      +     +  +V  G  
Sbjct: 311 TGYIGMGKVEKAFAVMEEMADRDCAPDTISYTMFIEALYSIGRREEAEKVFETMVEKGCK 370

Query: 108 PDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGN 167
           PD  T  I+I+ F       C E  +  AT + + M    V+P+   Y  +++GF ++  
Sbjct: 371 PDMHTYGIIIDNF-------CKEGSMAAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSR 423

Query: 168 LSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRG--IN 225
           L  AL L+++++    ++G++  T   +Y+ +I++LCK   +D+A EL  EM+ R   + 
Sbjct: 424 LEEALELYQRIL----KDGILPST--VTYNTVINALCKLKKMDEALELLREMQRRKEELE 477

Query: 226 PAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGL 285
           P++V  + +IHG    G  E    L  EM+D G  P+  T+  +I  L   GK++ A  L
Sbjct: 478 PSIVTYSMIIHGLGKVGMEERAFDLLAEMIDNGVIPDCFTYTSLIQTLAGAGKVSRAMEL 537

Query: 286 LELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGY 343
           LE M++ G+ PD  TY +L+   C    +D A ++   M   G      ++  +  G+
Sbjct: 538 LEEMLKAGIFPDDHTYGTLVQILCR-SDVDAAWDLLQEMMRNGHTPNEFTFKAVEKGF 594


>gi|147798989|emb|CAN61637.1| hypothetical protein VITISV_008458 [Vitis vinifera]
          Length = 708

 Score =  205 bits (521), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 135/484 (27%), Positives = 224/484 (46%), Gaps = 17/484 (3%)

Query: 59  ARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILIN 118
           A   F  M     SP   SF L+  A            +   +V  G + D  T  ++I+
Sbjct: 208 AENMFVEMCQRGVSPDCVSFKLMVVACCNMGRVLEAEKWLNAMVERGFIVDNATCTLIID 267

Query: 119 CFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKM 178
            F       C +  +      F  M+  G+ P+VI +  LING C+ G++  A  L ++M
Sbjct: 268 AF-------CQKGYVNRVVGYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEM 320

Query: 179 VSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEM-KGRGINPAVVVCTTLIHG 237
           V   +      K N+++++ +ID LCK+G  +KA  LFL++ +  G  P V   T +I+G
Sbjct: 321 VRRGW------KPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMING 374

Query: 238 FCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPD 297
           +C          L   M + G  PN  T+  +ID  CK G    A  L++LM + G +P+
Sbjct: 375 YCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPN 434

Query: 298 RFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYR 357
            +TYN+++DG C  G +D A  +   +   G +   V+Y IL++ +C+  +   ++  + 
Sbjct: 435 IYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFN 494

Query: 358 QIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNN 417
           +++  G    + +Y TL+S   +  Q   +++LF+E     + P   TY  +I G C+  
Sbjct: 495 KMLKVGFTPDIHSYTTLISXFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYG 554

Query: 418 CVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYS 477
               AVKLF  +  +        +  LI GLCK  +LD+A  L+  +  KGL P  VT  
Sbjct: 555 NTSLAVKLFQRMSNHGCAPDSITYGALISGLCKESKLDDARNLYDAMMDKGLSPCEVTRL 614

Query: 478 IMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEP 537
            + +  C+K     A + L  +EK      + T NTL+       K        HK+ + 
Sbjct: 615 TLAYEYCKKDDSSTAINVLDRLEKRQW---IRTVNTLVRKLCSEGKLDMAALFFHKLLDK 671

Query: 538 ERNL 541
           E N+
Sbjct: 672 EPNV 675



 Score =  201 bits (511), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 142/462 (30%), Positives = 225/462 (48%), Gaps = 17/462 (3%)

Query: 76  SSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKE 135
           ++  L+  A  +  + + V+ ++ K+V +GL P+ +    LIN       GLC +  IK+
Sbjct: 260 ATCTLIIDAFCQKGYVNRVVGYFWKMVEMGLAPNVINFTALIN-------GLCKQGSIKQ 312

Query: 136 ATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFS 195
           A  L + M+  G +P+V T+ TLI+G C+ G    A RL  K+V  D       K N+ +
Sbjct: 313 AFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDG-----YKPNVHT 367

Query: 196 YSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEML 255
           Y+ +I+  CKE  +++A+ L   M+ +G+ P     TTLI G C  GN+     L   M 
Sbjct: 368 YTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMG 427

Query: 256 DLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRID 315
             G  PN+ T+N +ID LCK G ++EA  LL  +   GL  D  TY  LM  +C     +
Sbjct: 428 KEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTN 487

Query: 316 TAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLL 375
            +   F  M   G    + SY  LI+ +C+   ++E+  L+ + +S G+  T  TY +++
Sbjct: 488 RSLVFFNKMLKVGFTPDIHSYTTLISXFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMI 547

Query: 376 SGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFE 435
            G  + G    A KLF  M  +   PD  TY  LI GLCK + + +A  L+  + M+K  
Sbjct: 548 CGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGALISGLCKESKLDDARNLYDAM-MDKGL 606

Query: 436 FGIEIFN-CLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKAND 494
              E+    L    CK      A  +  +L ++  + TV T   ++  LC +GKL+ A  
Sbjct: 607 SPCEVTRLTLAYEYCKKDDSSTAINVLDRLEKRQWIRTVNT---LVRKLCSEGKLDMAAL 663

Query: 495 FLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAE 536
           F   +       N VT    M+   ++NK   V EL  ++ E
Sbjct: 664 FFHKLLDKEPNVNRVTLLGFMNKCYESNKYGLVSELSERICE 705



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 107/367 (29%), Positives = 185/367 (50%), Gaps = 3/367 (0%)

Query: 195 SYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEM 254
           S+ +++ + C  G V +A++    M  RG       CT +I  FC  G    V G F +M
Sbjct: 226 SFKLMVVACCNMGRVLEAEKWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVVGYFWKM 285

Query: 255 LDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRI 314
           +++G  PN++ F  +I+ LCK G I +A  LLE M++RG  P+ +T+ +L+DG C  G  
Sbjct: 286 VEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWT 345

Query: 315 DTAREIFLSM-HSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNT 373
           + A  +FL +  S G K  V +Y  +INGYCK   +  A  L  ++   G+     TY T
Sbjct: 346 EKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTT 405

Query: 374 LLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNK 433
           L+ G  + G    A +L D M      P++ TYN +IDGLCK   + EA +L + + ++ 
Sbjct: 406 LIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHG 465

Query: 434 FEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKAN 493
            +     +  L+   C+    + +   F+K+ + G  P + +Y+ +I   CR+ +++++ 
Sbjct: 466 LQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISXFCRQKQMKESE 525

Query: 494 DFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
                    G  P   T+ +++ G+ +   TS  V+L  +M+       PD  T+  ++ 
Sbjct: 526 RLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRMS--NHGCAPDSITYGALIS 583

Query: 554 LLAKDEK 560
            L K+ K
Sbjct: 584 GLCKESK 590



 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 93/366 (25%), Positives = 179/366 (48%), Gaps = 3/366 (0%)

Query: 199 IIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLG 258
           ++ +  + G + +A  + +EM+ +G+  +      ++      G  E    +F+EM   G
Sbjct: 160 MVMNFAENGKLKEAVNMVVEMQNQGLVXSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRG 219

Query: 259 PRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAR 318
             P+ ++F +M+   C  G++ EA   L  M++RG   D  T   ++D +C  G ++   
Sbjct: 220 VSPDCVSFKLMVVACCNMGRVLEAEKWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVV 279

Query: 319 EIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGL 378
             F  M   G    V+++  LING CK  ++++A  L  +++  G +  V T+ TL+ GL
Sbjct: 280 GYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGL 339

Query: 379 FQAGQAGYAQKLFDEM-KLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFG 437
            + G    A +LF ++ +    +P++ TY  +I+G CK + +  A  L   ++       
Sbjct: 340 CKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPN 399

Query: 438 IEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLL 497
              +  LIDG CK G    A+EL   + ++G  P + TY+ +I GLC+KG L++A   L 
Sbjct: 400 TNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLN 459

Query: 498 YMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAK 557
            +  +G   + VT+  LM    +   T++ +   +KM +      PD  +++ ++    +
Sbjct: 460 KVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKV--GFTPDIHSYTTLISXFCR 517

Query: 558 DEKYHE 563
            ++  E
Sbjct: 518 QKQMKE 523



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 84/334 (25%), Positives = 169/334 (50%), Gaps = 3/334 (0%)

Query: 222 RGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINE 281
           + +  A  V   ++  F   G  +E   + +EM + G   +  T N ++D     G +  
Sbjct: 148 KNLERANEVMQCMVMNFAENGKLKEAVNMVVEMQNQGLVXSTQTLNCVLDVAVGMGLVEI 207

Query: 282 ANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILIN 341
           A  +   M QRG++PD  ++  ++   C +GR+  A +   +M  +G      +  ++I+
Sbjct: 208 AENMFVEMCQRGVSPDCVSFKLMVVACCNMGRVLEAEKWLNAMVERGFIVDNATCTLIID 267

Query: 342 GYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEP 401
            +C+   V   +  + +++  G+   VI +  L++GL + G    A +L +EM     +P
Sbjct: 268 AFCQKGYVNRVVGYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKP 327

Query: 402 DLSTYNILIDGLCKNNCVQEAVKLF-HMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWEL 460
           ++ T+  LIDGLCK    ++A +LF  ++  + ++  +  +  +I+G CK  +L+ A  L
Sbjct: 328 NVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEML 387

Query: 461 FHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQ 520
             ++ ++GLVP   TY+ +I G C+ G   +A + +  M K G +PN+ T+N ++ G  +
Sbjct: 388 LSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCK 447

Query: 521 NNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDL 554
                +   LL+K++     L  D  T++I++ +
Sbjct: 448 KGSLDEAYRLLNKVS--VHGLQADGVTYTILMSV 479



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 60/253 (23%), Positives = 97/253 (38%), Gaps = 53/253 (20%)

Query: 55  NLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLN 114
           + N +  FF  M  +  +P I S+  L     + +        + + VS+GL+P   T  
Sbjct: 485 DTNRSLVFFNKMLKVGFTPDIHSYTTLISXFCRQKQMKESERLFEEAVSLGLIPTKKTYT 544

Query: 115 ILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRL 174
            +I C      G C       A  LF+ M   G  PD ITYG LI+G C+          
Sbjct: 545 SMI-C------GYCRYGNTSLAVKLFQRMSNHGCAPDSITYGALISGLCK---------- 587

Query: 175 HKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTL 234
                                          E  +D A+ L+  M  +G++P  V   TL
Sbjct: 588 -------------------------------ESKLDDARNLYDAMMDKGLSPCEVTRLTL 616

Query: 235 IHGFCCAGNWEEVNGLFIEMLD-LGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRG 293
            + +C     ++ +   I +LD L  R  + T N ++  LC  GK++ A      ++ + 
Sbjct: 617 AYEYC----KKDDSSTAINVLDRLEKRQWIRTVNTLVRKLCSEGKLDMAALFFHKLLDKE 672

Query: 294 LNPDRFTYNSLMD 306
            N +R T    M+
Sbjct: 673 PNVNRVTLLGFMN 685


>gi|356525427|ref|XP_003531326.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
           mitochondrial-like [Glycine max]
          Length = 521

 Score =  205 bits (521), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 128/429 (29%), Positives = 213/429 (49%), Gaps = 25/429 (5%)

Query: 103 SIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGF 162
           S+G +PD    N  +N        LC +NR++ A  LF +M + G  PDV++Y  +I+  
Sbjct: 112 SLGFVPDIWAFNTYLNL-------LCRQNRLETALELFHSMPSKGRDPDVVSYTIIIDAL 164

Query: 163 CRTGNLSVALRLHKKMV----SGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLE 218
           C       A ++ ++++    S DY+  +           ++  LC  G VD A EL + 
Sbjct: 165 CNAKRFDEAAKVWRRLIDKGLSPDYKACVA----------LVVGLCSGGRVDLAYELVVG 214

Query: 219 MKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGK 278
           +   G+    +V   LI GFC  G  ++   +   M   G  P+L+T+N++++  C+ G 
Sbjct: 215 VIKGGVKVNSLVYNALIDGFCRMGRVDKAMKIKAFMSRTGCVPDLVTYNILLNYCCEEGM 274

Query: 279 INEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLS-MHSKG-CKHTVVSY 336
           ++EA  L+E M + G+ PD ++YN L+ G+C    +D A  + +  M +KG C   VVSY
Sbjct: 275 VDEAVRLVETMERSGVEPDLYSYNELLKGFCKANMVDRAHLMMVERMQTKGMCD--VVSY 332

Query: 337 NILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKL 396
           N +I  +CK     +   L+ ++   G+R  ++T+N L+    + G     +KL DEM  
Sbjct: 333 NTVITAFCKARRTRKGYELFEEMCGKGIRPDMVTFNILIDAFLREGSTHVVKKLLDEMTK 392

Query: 397 YNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDN 456
             V PD   Y  ++D LCKN  V  A  +F  +  N     +  +N L++G CK  R+ +
Sbjct: 393 MRVLPDCIFYTAVVDHLCKNGKVDVAHSVFRDMVENGVNPDVISYNALLNGFCKTSRVMD 452

Query: 457 AWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMH 516
           A  LF ++  KGL P  VTY +++ GL R  K+  A      M + G   N     TL++
Sbjct: 453 AMHLFDEMQSKGLYPDEVTYKLIVGGLIRGKKISLACRVWDQMMERGFTLNRHLSETLVN 512

Query: 517 GFLQNNKTS 525
               ++ T+
Sbjct: 513 AIQSSDGTT 521



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 131/492 (26%), Positives = 232/492 (47%), Gaps = 21/492 (4%)

Query: 50  KSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLV---SIGL 106
           K+G+IN  +A Y F  MT          +N   G + ++        +YR+ V      L
Sbjct: 22  KAGLIN--QAIYLFDQMTESNCRVFSVDYNRFIGVLLRHSRLHLAHHYYRRHVIPRGFSL 79

Query: 107 LPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTG 166
           LP   T +  I+   +    +     +     L  +M + G  PD+  + T +N  CR  
Sbjct: 80  LP--FTYSRFISALCSAPNNI----NLPLIHSLLLDMDSLGFVPDIWAFNTYLNLLCRQN 133

Query: 167 NLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINP 226
            L  AL L   M S   +       ++ SY+IIID+LC     D+A +++  +  +G++P
Sbjct: 134 RLETALELFHSMPSKGRD------PDVVSYTIIIDALCNAKRFDEAAKVWRRLIDKGLSP 187

Query: 227 AVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLL 286
               C  L+ G C  G  +    L + ++  G + N L +N +ID  C+ G++++A  + 
Sbjct: 188 DYKACVALVVGLCSGGRVDLAYELVVGVIKGGVKVNSLVYNALIDGFCRMGRVDKAMKIK 247

Query: 287 ELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKI 346
             M + G  PD  TYN L++  C  G +D A  +  +M   G +  + SYN L+ G+CK 
Sbjct: 248 AFMSRTGCVPDLVTYNILLNYCCEEGMVDEAVRLVETMERSGVEPDLYSYNELLKGFCKA 307

Query: 347 LNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTY 406
             V+ A  +  + +       V++YNT+++   +A +     +LF+EM    + PD+ T+
Sbjct: 308 NMVDRAHLMMVERMQTKGMCDVVSYNTVITAFCKARRTRKGYELFEEMCGKGIRPDMVTF 367

Query: 407 NILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIE--IFNCLIDGLCKAGRLDNAWELFHKL 464
           NILID   +        KL    EM K     +   +  ++D LCK G++D A  +F  +
Sbjct: 368 NILIDAFLREGSTHVVKKLLD--EMTKMRVLPDCIFYTAVVDHLCKNGKVDVAHSVFRDM 425

Query: 465 PQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKT 524
            + G+ P V++Y+ +++G C+  ++  A      M+  G  P+ VT+  ++ G ++  K 
Sbjct: 426 VENGVNPDVISYNALLNGFCKTSRVMDAMHLFDEMQSKGLYPDEVTYKLIVGGLIRGKKI 485

Query: 525 SKVVELLHKMAE 536
           S    +  +M E
Sbjct: 486 SLACRVWDQMME 497



 Score =  152 bits (383), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 121/465 (26%), Positives = 209/465 (44%), Gaps = 18/465 (3%)

Query: 153 ITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFS--YSIIIDSLCKEGLVD 210
           + Y + I+   + G ++ A+ L  +M          S   +FS  Y+  I  L +   + 
Sbjct: 11  LAYRSQISKLVKAGLINQAIYLFDQMTE--------SNCRVFSVDYNRFIGVLLRHSRLH 62

Query: 211 KAKELFLE-MKGRGINPAVVVCTTLIHGFCCAGN---WEEVNGLFIEMLDLGPRPNLLTF 266
            A   +   +  RG +      +  I   C A N      ++ L ++M  LG  P++  F
Sbjct: 63  LAHHYYRRHVIPRGFSLLPFTYSRFISALCSAPNNINLPLIHSLLLDMDSLGFVPDIWAF 122

Query: 267 NVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHS 326
           N  ++ LC+  ++  A  L   M  +G +PD  +Y  ++D  C   R D A +++  +  
Sbjct: 123 NTYLNLLCRQNRLETALELFHSMPSKGRDPDVVSYTIIIDALCNAKRFDEAAKVWRRLID 182

Query: 327 KGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGY 386
           KG      +   L+ G C    V+ A  L   +I  GV+   + YN L+ G  + G+   
Sbjct: 183 KGLSPDYKACVALVVGLCSGGRVDLAYELVVGVIKGGVKVNSLVYNALIDGFCRMGRVDK 242

Query: 387 AQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLID 446
           A K+   M      PDL TYNIL++  C+   V EAV+L   +E +  E  +  +N L+ 
Sbjct: 243 AMKIKAFMSRTGCVPDLVTYNILLNYCCEEGMVDEAVRLVETMERSGVEPDLYSYNELLK 302

Query: 447 GLCKAGRLDNA-WELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCA 505
           G CKA  +D A   +  ++  KG+   VV+Y+ +I   C+  +  K  +    M   G  
Sbjct: 303 GFCKANMVDRAHLMMVERMQTKGMC-DVVSYNTVITAFCKARRTRKGYELFEEMCGKGIR 361

Query: 506 PNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECS 565
           P++VTFN L+  FL+   T  V +LL +M +    ++PD   ++ VVD L K+ K     
Sbjct: 362 PDMVTFNILIDAFLREGSTHVVKKLLDEMTKMR--VLPDCIFYTAVVDHLCKNGKVDVAH 419

Query: 566 AVSKSSYRACLYVTIFQPSSLGSMIGCTVRLMPQPEMSDTLGDDG 610
           +V +      +   +   ++L +    T R+M    + D +   G
Sbjct: 420 SVFRDMVENGVNPDVISYNALLNGFCKTSRVMDAMHLFDEMQSKG 464



 Score = 99.0 bits (245), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 69/269 (25%), Positives = 122/269 (45%), Gaps = 6/269 (2%)

Query: 289 MIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILN 348
           M Q  +   R  Y S +      G I+ A  +F  M    C+   V YN  I    +   
Sbjct: 1   MYQSSIGAHRLAYRSQISKLVKAGLINQAIYLFDQMTESNCRVFSVDYNRFIGVLLRHSR 60

Query: 349 VEEAMSLYRQ-IISNGVRQTVITYNTLLSGLFQAG---QAGYAQKLFDEMKLYNVEPDLS 404
           +  A   YR+ +I  G      TY+  +S L  A           L  +M      PD+ 
Sbjct: 61  LHLAHHYYRRHVIPRGFSLLPFTYSRFISALCSAPNNINLPLIHSLLLDMDSLGFVPDIW 120

Query: 405 TYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKL 464
            +N  ++ LC+ N ++ A++LFH +     +  +  +  +ID LC A R D A +++ +L
Sbjct: 121 AFNTYLNLLCRQNRLETALELFHSMPSKGRDPDVVSYTIIIDALCNAKRFDEAAKVWRRL 180

Query: 465 PQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKT 524
             KGL P       ++ GLC  G+++ A + ++ + K G   N + +N L+ GF +  + 
Sbjct: 181 IDKGLSPDYKACVALVVGLCSGGRVDLAYELVVGVIKGGVKVNSLVYNALIDGFCRMGRV 240

Query: 525 SKVVELLHKMAEPERNLVPDDTTFSIVVD 553
            K +++   M+      VPD  T++I+++
Sbjct: 241 DKAMKIKAFMSRT--GCVPDLVTYNILLN 267


>gi|224083888|ref|XP_002307160.1| predicted protein [Populus trichocarpa]
 gi|222856609|gb|EEE94156.1| predicted protein [Populus trichocarpa]
          Length = 726

 Score =  205 bits (521), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 138/491 (28%), Positives = 237/491 (48%), Gaps = 19/491 (3%)

Query: 56  LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNI 115
           +++A + F  M     +P IS ++++ G +  N+     +  Y ++    + PD   +  
Sbjct: 186 VDKALHLFDKMKKSGFTPDISLYDVIIGGLCVNKDVKKALCLYSEMKGFKIQPDVKIVTK 245

Query: 116 LINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLH 175
           LI+ F  +E   C    + E             +   + Y +++N     G++  A  L 
Sbjct: 246 LISSFSKEEELTCFFEEMHED---------MDPKASTLLYNSVLNSLVDNGSVHKAYHLL 296

Query: 176 KKMVSGD-YENGLISK---------TNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGIN 225
           + +  G+   +G I K          N  ++SI+I+ L K G +D A  LF +M   G  
Sbjct: 297 QAITIGNCIGDGEIGKLFRGKAMVPPNSTTFSIVINGLIKTGDLDLAVGLFRDMARIGCK 356

Query: 226 PAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGL 285
           P +++   LI G C +   +E  GL  EM + G  P   T N +  CLC+   I+ A  L
Sbjct: 357 PDLLLYNNLIDGLCTSNRLQESCGLLQEMEESGIEPTSFTNNCIFGCLCRRHDISGALHL 416

Query: 286 LELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCK 345
           L+ M   G  P      SL+   C  G+   A +  + M  +G +  +V+Y+  ++G  K
Sbjct: 417 LKKMRIHGHVPWIKHSTSLVKELCKHGKEVEACKFLVDMAEEGFQPDIVAYSACLDGLIK 476

Query: 346 ILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLST 405
           I  V++A+ L++ I + G    VI YN L+ GL +  +   AQ L  EM+   + P   T
Sbjct: 477 IQEVDQALKLFQDICAQGYCPDVIAYNILIKGLCKTQRIAEAQNLLHEMEEKGLVPSAVT 536

Query: 406 YNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLP 465
           YN LIDGLCK + ++EA+    M+   + E  +  ++ LI+GLC AGR D+A  L++++ 
Sbjct: 537 YNTLIDGLCKTDHLEEAMLFLSMMIEKEREPNVITYSTLINGLCNAGRPDDALVLWNEMG 596

Query: 466 QKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTS 525
           +KG  P+ + Y   IHGL   G+  +A  +L  ME+    P+   +  L++ FL ++   
Sbjct: 597 RKGCTPSSIAYMAFIHGLSNCGRPNEALVYLREMEEREMKPDTYVYVGLLNAFLVDSNQP 656

Query: 526 KVVELLHKMAE 536
              E+L +M +
Sbjct: 657 LAFEILQEMVD 667



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 134/487 (27%), Positives = 218/487 (44%), Gaps = 36/487 (7%)

Query: 79  NLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATW 138
           +L++G V ++R  D  +  + K+   G  PD    +++I        GLCV   +K+A  
Sbjct: 175 SLIYGFVKESR-VDKALHLFDKMKKSGFTPDISLYDVIIG-------GLCVNKDVKKALC 226

Query: 139 LFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALR-LHKKMVSGDYENGLISKTNIFSYS 197
           L+  M  F ++PDV     LI+ F +   L+     +H+ M           K +   Y+
Sbjct: 227 LYSEMKGFKIQPDVKIVTKLISSFSKEEELTCFFEEMHEDMDP---------KASTLLYN 277

Query: 198 IIIDSLCKEGLVDKAKELFLEM---------------KGRG-INPAVVVCTTLIHGFCCA 241
            +++SL   G V KA  L   +               +G+  + P     + +I+G    
Sbjct: 278 SVLNSLVDNGSVHKAYHLLQAITIGNCIGDGEIGKLFRGKAMVPPNSTTFSIVINGLIKT 337

Query: 242 GNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTY 301
           G+ +   GLF +M  +G +P+LL +N +ID LC   ++ E+ GLL+ M + G+ P  FT 
Sbjct: 338 GDLDLAVGLFRDMARIGCKPDLLLYNNLIDGLCTSNRLQESCGLLQEMEESGIEPTSFTN 397

Query: 302 NSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIIS 361
           N +    C    I  A  +   M   G    +     L+   CK     EA      +  
Sbjct: 398 NCIFGCLCRRHDISGALHLLKKMRIHGHVPWIKHSTSLVKELCKHGKEVEACKFLVDMAE 457

Query: 362 NGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQE 421
            G +  ++ Y+  L GL +  +   A KLF ++      PD+  YNILI GLCK   + E
Sbjct: 458 EGFQPDIVAYSACLDGLIKIQEVDQALKLFQDICAQGYCPDVIAYNILIKGLCKTQRIAE 517

Query: 422 AVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIH 481
           A  L H +E          +N LIDGLCK   L+ A      + +K   P V+TYS +I+
Sbjct: 518 AQNLLHEMEEKGLVPSAVTYNTLIDGLCKTDHLEEAMLFLSMMIEKEREPNVITYSTLIN 577

Query: 482 GLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNL 541
           GLC  G+ + A      M + GC P+ + +   +HG     + ++ +  L +M   ER +
Sbjct: 578 GLCNAGRPDDALVLWNEMGRKGCTPSSIAYMAFIHGLSNCGRPNEALVYLREME--EREM 635

Query: 542 VPDDTTF 548
            PD   +
Sbjct: 636 KPDTYVY 642



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 108/370 (29%), Positives = 179/370 (48%), Gaps = 21/370 (5%)

Query: 108 PDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGN 167
           P+  T +I+IN       GL     +  A  LF++M   G +PD++ Y  LI+G C +  
Sbjct: 322 PNSTTFSIVIN-------GLIKTGDLDLAVGLFRDMARIGCKPDLLLYNNLIDGLCTSNR 374

Query: 168 LSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPA 227
           L  +  L ++M     E   I  T+ F+ + I   LC+   +  A  L  +M+  G  P 
Sbjct: 375 LQESCGLLQEM-----EESGIEPTS-FTNNCIFGCLCRRHDISGALHLLKKMRIHGHVPW 428

Query: 228 VVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLE 287
           +   T+L+   C  G   E     ++M + G +P+++ ++  +D L K  ++++A  L +
Sbjct: 429 IKHSTSLVKELCKHGKEVEACKFLVDMAEEGFQPDIVAYSACLDGLIKIQEVDQALKLFQ 488

Query: 288 LMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKIL 347
            +  +G  PD   YN L+ G C   RI  A+ +   M  KG   + V+YN LI+G CK  
Sbjct: 489 DICAQGYCPDVIAYNILIKGLCKTQRIAEAQNLLHEMEEKGLVPSAVTYNTLIDGLCKTD 548

Query: 348 NVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYN 407
           ++EEAM     +I       VITY+TL++GL  AG+   A  L++EM      P    Y 
Sbjct: 549 HLEEAMLFLSMMIEKEREPNVITYSTLINGLCNAGRPDDALVLWNEMGRKGCTPSSIAYM 608

Query: 408 ILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDN----AWELFHK 463
             I GL  +NC +    L ++ EM + E   + +  +  GL  A  +D+    A+E+  +
Sbjct: 609 AFIHGL--SNCGRPNEALVYLREMEEREMKPDTY--VYVGLLNAFLVDSNQPLAFEILQE 664

Query: 464 LPQKGLVPTV 473
           +  KG  P +
Sbjct: 665 MVDKGKFPDL 674



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 101/364 (27%), Positives = 160/364 (43%), Gaps = 36/364 (9%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
           P  ++F+++   + K    D  +  +R +  IG  PD L  N LI+       GLC  NR
Sbjct: 322 PNSTTFSIVINGLIKTGDLDLAVGLFRDMARIGCKPDLLLYNNLID-------GLCTSNR 374

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKM-VSG-----DYENG 186
           ++E+  L + M   G+ P   T   +    CR  ++S AL L KKM + G      +   
Sbjct: 375 LQESCGLLQEMEESGIEPTSFTNNCIFGCLCRRHDISGALHLLKKMRIHGHVPWIKHSTS 434

Query: 187 LIS-----------------------KTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRG 223
           L+                        + +I +YS  +D L K   VD+A +LF ++  +G
Sbjct: 435 LVKELCKHGKEVEACKFLVDMAEEGFQPDIVAYSACLDGLIKIQEVDQALKLFQDICAQG 494

Query: 224 INPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEAN 283
             P V+    LI G C      E   L  EM + G  P+ +T+N +ID LCK   + EA 
Sbjct: 495 YCPDVIAYNILIKGLCKTQRIAEAQNLLHEMEEKGLVPSAVTYNTLIDGLCKTDHLEEAM 554

Query: 284 GLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGY 343
             L +MI++   P+  TY++L++G C  GR D A  ++  M  KGC  + ++Y   I+G 
Sbjct: 555 LFLSMMIEKEREPNVITYSTLINGLCNAGRPDDALVLWNEMGRKGCTPSSIAYMAFIHGL 614

Query: 344 CKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDL 403
                  EA+   R++    ++     Y  LL+          A ++  EM      PDL
Sbjct: 615 SNCGRPNEALVYLREMEEREMKPDTYVYVGLLNAFLVDSNQPLAFEILQEMVDKGKFPDL 674

Query: 404 STYN 407
              N
Sbjct: 675 HDKN 678



 Score =  125 bits (313), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 129/533 (24%), Positives = 214/533 (40%), Gaps = 93/533 (17%)

Query: 112 TLNILINCFGN--------------KERGLCVENRIKEATWL---------------FKN 142
            L  LI C GN              ++ GLCV N       L                K 
Sbjct: 32  ALGFLIRCLGNAGLVVEANLLFDQVQKMGLCVPNSYSYTCLLEVLSKSICIDLLEMRLKE 91

Query: 143 MIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDS 202
           M   G   D  T   ++  +C       AL +  ++    ++ G + +   + +SI++ +
Sbjct: 92  MHDHGWGFDKYTLTPVLQVYCNMAEFDKALDVFNEI----HDRGWVDE---YVFSILVLA 144

Query: 203 LCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPN 262
             K G VDKA EL   M+ + +        +LI+GF      ++   LF +M   G  P+
Sbjct: 145 FSKWGKVDKACELIETMEEKNVRLNKKTFCSLIYGFVKESRVDKALHLFDKMKKSGFTPD 204

Query: 263 LLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFL 322
           +  ++V+I  LC    + +A  L   M    + PD      L+  +    + +     F 
Sbjct: 205 ISLYDVIIGGLCVNKDVKKALCLYSEMKGFKIQPDVKIVTKLISSF---SKEEELTCFFE 261

Query: 323 SMHSK-GCKHTVVSYNILINGYCKILNVEEAMSLYRQI-----ISNG-----------VR 365
            MH     K + + YN ++N      +V +A  L + I     I +G           V 
Sbjct: 262 EMHEDMDPKASTLLYNSVLNSLVDNGSVHKAYHLLQAITIGNCIGDGEIGKLFRGKAMVP 321

Query: 366 QTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKL 425
               T++ +++GL + G    A  LF +M     +PDL  YN LIDGLC +N +QE+  L
Sbjct: 322 PNSTTFSIVINGLIKTGDLDLAVGLFRDMARIGCKPDLLLYNNLIDGLCTSNRLQESCGL 381

Query: 426 FHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCR 485
              +E +  E      NC+   LC+   +  A  L  K+   G VP +   + ++  LC+
Sbjct: 382 LQEMEESGIEPTSFTNNCIFGCLCRRHDISGALHLLKKMRIHGHVPWIKHSTSLVKELCK 441

Query: 486 KGKLEKANDFLLYMEKNG-------------------------------CA----PNVVT 510
            GK  +A  FL+ M + G                               CA    P+V+ 
Sbjct: 442 HGKEVEACKFLVDMAEEGFQPDIVAYSACLDGLIKIQEVDQALKLFQDICAQGYCPDVIA 501

Query: 511 FNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
           +N L+ G  +  + ++   LLH+M   E+ LVP   T++ ++D L K +   E
Sbjct: 502 YNILIKGLCKTQRIAEAQNLLHEME--EKGLVPSAVTYNTLIDGLCKTDHLEE 552



 Score = 99.0 bits (245), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 71/261 (27%), Positives = 112/261 (42%), Gaps = 15/261 (5%)

Query: 44  FLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVS 103
            + E CK G     EA  F   M      P I +++     + K +  D  +  ++ + +
Sbjct: 435 LVKELCKHG--KEVEACKFLVDMAEEGFQPDIVAYSACLDGLIKIQEVDQALKLFQDICA 492

Query: 104 IGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFC 163
            G  PD +  NILI       +GLC   RI EA  L   M   G+ P  +TY TLI+G C
Sbjct: 493 QGYCPDVIAYNILI-------KGLCKTQRIAEAQNLLHEMEEKGLVPSAVTYNTLIDGLC 545

Query: 164 RTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRG 223
           +T +L  A+     M+  + E       N+ +YS +I+ LC  G  D A  L+ EM  +G
Sbjct: 546 KTDHLEEAMLFLSMMIEKERE------PNVITYSTLINGLCNAGRPDDALVLWNEMGRKG 599

Query: 224 INPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEAN 283
             P+ +     IHG    G   E      EM +   +P+   +  +++          A 
Sbjct: 600 CTPSSIAYMAFIHGLSNCGRPNEALVYLREMEEREMKPDTYVYVGLLNAFLVDSNQPLAF 659

Query: 284 GLLELMIQRGLNPDRFTYNSL 304
            +L+ M+ +G  PD    N +
Sbjct: 660 EILQEMVDKGKFPDLHDKNHI 680



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 71/311 (22%), Positives = 125/311 (40%), Gaps = 43/311 (13%)

Query: 261 PNLLTFNVMIDCLCKGGKINEANGLLELMIQRGL-NPDRFTYNSLMDGYCLVGRIDTARE 319
           P  L F  +I CL   G + EAN L + + + GL  P+ ++Y  L++       ID    
Sbjct: 30  PGALGF--LIRCLGNAGLVVEANLLFDQVQKMGLCVPNSYSYTCLLEVLSKSICIDLLEM 87

Query: 320 IFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLF 379
               MH  G      +   ++  YC +   ++A+ ++ +I   G                
Sbjct: 88  RLKEMHDHGWGFDKYTLTPVLQVYCNMAEFDKALDVFNEIHDRG---------------- 131

Query: 380 QAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIE 439
                       DE            ++IL+    K   V +A +L   +E        +
Sbjct: 132 ----------WVDEY----------VFSILVLAFSKWGKVDKACELIETMEEKNVRLNKK 171

Query: 440 IFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYM 499
            F  LI G  K  R+D A  LF K+ + G  P +  Y ++I GLC    ++KA    LY 
Sbjct: 172 TFCSLIYGFVKESRVDKALHLFDKMKKSGFTPDISLYDVIIGGLCVNKDVKKA--LCLYS 229

Query: 500 EKNG--CAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAK 557
           E  G    P+V     L+  F +  + +   E +H+  +P+ + +  ++  + +VD  + 
Sbjct: 230 EMKGFKIQPDVKIVTKLISSFSKEEELTCFFEEMHEDMDPKASTLLYNSVLNSLVDNGSV 289

Query: 558 DEKYHECSAVS 568
            + YH   A++
Sbjct: 290 HKAYHLLQAIT 300


>gi|302767030|ref|XP_002966935.1| hypothetical protein SELMODRAFT_87043 [Selaginella moellendorffii]
 gi|300164926|gb|EFJ31534.1| hypothetical protein SELMODRAFT_87043 [Selaginella moellendorffii]
          Length = 428

 Score =  205 bits (521), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 127/414 (30%), Positives = 212/414 (51%), Gaps = 13/414 (3%)

Query: 126 GLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYEN 185
           GLC   + + A  L   M A G    V+TY TLI+G C++G+L  A  L +KM       
Sbjct: 19  GLCKARKPRHALELLHVMAANGYDASVVTYTTLIDGLCKSGDLDAAQALLQKMADAG--- 75

Query: 186 GLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWE 245
                 N+ +Y+ +ID LCK      A +    M   G  P +V   +LIHG C A   +
Sbjct: 76  ---CAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPDLVTYNSLIHGLCMANRMD 132

Query: 246 EVNGLFIE--MLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNS 303
           +  GL ++  M++ G  P+++T+N  I  LCK GK+++   +LE M + G++PD  T+ S
Sbjct: 133 DA-GLVLQELMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGISPDVVTFCS 191

Query: 304 LMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNG 363
           ++ G C   RID A ++F  M  +GC    ++Y+I+++   +   ++    +   ++ +G
Sbjct: 192 IISGLCKANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVEEVLEHMVKSG 251

Query: 364 VRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAV 423
                 TY  L+  L +AG    A   +++        ++ T+N  I  LC++     A 
Sbjct: 252 HYALSATYAPLIHALIRAGDIESASWAYEQAMEAGCVMEVYTHNAFIGALCRSGKFPLAK 311

Query: 424 K-LFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLV-PTVVTYSIMIH 481
             L  M+E       +  +N +IDGLCK+G +D+AW+L  K+   G   P V+ ++ +I 
Sbjct: 312 NILLGMIESGSLP-NLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCKPDVIFFNTLIS 370

Query: 482 GLCRKGKLEKANDFLLYME-KNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKM 534
           G C+ G+L +A   L  M+ KN C P+VVT+NT++ G  +     +   LL +M
Sbjct: 371 GFCKAGRLSQAQQLLKEMKAKNICVPDVVTYNTMIDGQSKFGSLKQAKLLLEEM 424



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 118/407 (28%), Positives = 202/407 (49%), Gaps = 9/407 (2%)

Query: 149 RPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGL 208
           R D   Y TLI G C+      AL L   M +  Y+       ++ +Y+ +ID LCK G 
Sbjct: 7   RLDAAIYNTLIAGLCKARKPRHALELLHVMAANGYD------ASVVTYTTLIDGLCKSGD 60

Query: 209 VDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNV 268
           +D A+ L  +M   G  P VV  T LI G C A    +       ML  G  P+L+T+N 
Sbjct: 61  LDAAQALLQKMADAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPDLVTYNS 120

Query: 269 MIDCLCKGGKINEANGLL-ELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSK 327
           +I  LC   ++++A  +L ELMI+ G  PD  TYN+ + G C  G++D   E+   M   
Sbjct: 121 LIHGLCMANRMDDAGLVLQELMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRG 180

Query: 328 GCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYA 387
           G    VV++  +I+G CK   +++A  +++ ++  G     +TY+ +L  L +A +    
Sbjct: 181 GISPDVVTFCSIISGLCKANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTV 240

Query: 388 QKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDG 447
           +++ + M         +TY  LI  L +   ++ A   +           +   N  I  
Sbjct: 241 EEVLEHMVKSGHYALSATYAPLIHALIRAGDIESASWAYEQAMEAGCVMEVYTHNAFIGA 300

Query: 448 LCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCA-P 506
           LC++G+   A  +   + + G +P +++Y+ +I GLC+ G ++ A      M  +GC  P
Sbjct: 301 LCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCKP 360

Query: 507 NVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
           +V+ FNTL+ GF +  + S+  +LL +M + +   VPD  T++ ++D
Sbjct: 361 DVIFFNTLISGFCKAGRLSQAQQLLKEM-KAKNICVPDVVTYNTMID 406



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 104/353 (29%), Positives = 169/353 (47%), Gaps = 5/353 (1%)

Query: 219 MKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGK 278
           M  R       +  TLI G C A        L   M   G   +++T+  +ID LCK G 
Sbjct: 1   MASRHFRLDAAIYNTLIAGLCKARKPRHALELLHVMAANGYDASVVTYTTLIDGLCKSGD 60

Query: 279 INEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNI 338
           ++ A  LL+ M   G  P+  TY +L+DG C   R   A +    M   GC+  +V+YN 
Sbjct: 61  LDAAQALLQKMADAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPDLVTYNS 120

Query: 339 LINGYCKILNVEEA-MSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLY 397
           LI+G C    +++A + L   +I +G    V+TYNT +SGL +AG+     ++ +EM   
Sbjct: 121 LIHGLCMANRMDDAGLVLQELMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRG 180

Query: 398 NVEPDLSTYNILIDGLCKNNCVQEAVKLFH-MLEMNKFEFGIEIFNCLIDGLCKAGRLDN 456
            + PD+ T+  +I GLCK N + +A ++F  MLE       +  ++ ++D L +A RLD 
Sbjct: 181 GISPDVVTFCSIISGLCKANRIDDAFQVFKGMLERGCVPDSL-TYSIMLDNLSRANRLDT 239

Query: 457 AWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMH 516
             E+   + + G      TY+ +IH L R G +E A+       + GC   V T N  + 
Sbjct: 240 VEEVLEHMVKSGHYALSATYAPLIHALIRAGDIESASWAYEQAMEAGCVMEVYTHNAFIG 299

Query: 517 GFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSK 569
              ++ K      +L  M E     +P+  +++ V+D L K     +   +S+
Sbjct: 300 ALCRSGKFPLAKNILLGMIESGS--LPNLLSYNFVIDGLCKSGNVDDAWKLSR 350



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 45/150 (30%), Positives = 78/150 (52%), Gaps = 13/150 (8%)

Query: 75  ISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIK 134
           + + N   GA+ ++  +    +    ++  G LP+ L+ N +I+       GLC    + 
Sbjct: 291 VYTHNAFIGALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVID-------GLCKSGNVD 343

Query: 135 EATWLFKNMIAFG-VRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNI 193
           +A  L + M+  G  +PDVI + TLI+GFC+ G LS A +L K+M + +     I   ++
Sbjct: 344 DAWKLSRKMLDSGCCKPDVIFFNTLISGFCKAGRLSQAQQLLKEMKAKN-----ICVPDV 398

Query: 194 FSYSIIIDSLCKEGLVDKAKELFLEMKGRG 223
            +Y+ +ID   K G + +AK L  EM+  G
Sbjct: 399 VTYNTMIDGQSKFGSLKQAKLLLEEMQAVG 428


>gi|242047668|ref|XP_002461580.1| hypothetical protein SORBIDRAFT_02g005000 [Sorghum bicolor]
 gi|241924957|gb|EER98101.1| hypothetical protein SORBIDRAFT_02g005000 [Sorghum bicolor]
          Length = 532

 Score =  204 bits (520), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 132/430 (30%), Positives = 209/430 (48%), Gaps = 7/430 (1%)

Query: 125 RGLCVENRIKEA-TWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDY 183
           R LC E R  +A   + +     G  PDV +Y  L+ G C       A+ L   M     
Sbjct: 56  RTLCAEKRTSDAMNIVIRWTPKLGCTPDVFSYTVLLKGLCDEKKCEEAVDLIHMMA---- 111

Query: 184 ENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGN 243
           E+G     N+ SY+ +I    KE  V KA  LF EM  RGI P VV C ++I G C    
Sbjct: 112 EDGDHCPPNVVSYTTVIHGFFKEDEVGKAYTLFCEMLDRGIPPDVVTCNSIIDGLCKVQA 171

Query: 244 WEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNS 303
            ++   +  +M D    P+  T+N ++      G++ EA  +L+ M + G  P+  TY+ 
Sbjct: 172 MDKAEEVLRQMFDKHIMPDCTTYNSLVHGYLSSGQLKEAVRILKQMSRHGQPPNGVTYSM 231

Query: 304 LMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNG 363
           L+D  C  G    AREI  SM        V +Y  L++GY    ++ E  +L   ++ NG
Sbjct: 232 LIDCLCKFGGHTEAREILNSMIQSRGNPNVATYGGLLHGYATKGDLVEMNNLIDLMVQNG 291

Query: 364 VRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAV 423
           VR     +N  +    + G+   A   F++M+   + PD+ +Y  +IDGLCK   +  A+
Sbjct: 292 VRPDHHIFNIQIYAYVKCGRLDEAMLTFNKMRQQGLMPDIISYGTMIDGLCKIGRLDAAM 351

Query: 424 KLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGL 483
             F  +  +     I +F  LI G    G+ + A ELF+++  +G+ PTVV ++ MI  L
Sbjct: 352 SQFCQMIDDGLSPDIVVFTNLIHGFSMYGKWEKAEELFYEMMDRGIRPTVVVFTTMIDKL 411

Query: 484 CRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVP 543
            ++GK+ +A      M      PNVV++N ++HG+    K  +V++LL  M      L P
Sbjct: 412 FKEGKVTEAKTLFDLMPIASVKPNVVSYNAIIHGYFLAGKLDEVLKLLDDML--SVGLKP 469

Query: 544 DDTTFSIVVD 553
           +  TF+ ++D
Sbjct: 470 NAVTFNTLLD 479



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 136/448 (30%), Positives = 219/448 (48%), Gaps = 15/448 (3%)

Query: 75  ISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIK 134
           IS   +L    A+ R  DA+    R    +G  PD  +  +L+       +GLC E + +
Sbjct: 49  ISFTPILRTLCAEKRTSDAMNIVIRWTPKLGCTPDVFSYTVLL-------KGLCDEKKCE 101

Query: 135 EATWLFKNMIAFG--VRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
           EA  L   M   G    P+V++Y T+I+GF +   +  A  L  +M+    + G+    +
Sbjct: 102 EAVDLIHMMAEDGDHCPPNVVSYTTVIHGFFKEDEVGKAYTLFCEML----DRGI--PPD 155

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
           + + + IID LCK   +DKA+E+  +M  + I P      +L+HG+  +G  +E   +  
Sbjct: 156 VVTCNSIIDGLCKVQAMDKAEEVLRQMFDKHIMPDCTTYNSLVHGYLSSGQLKEAVRILK 215

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
           +M   G  PN +T++++IDCLCK G   EA  +L  MIQ   NP+  TY  L+ GY   G
Sbjct: 216 QMSRHGQPPNGVTYSMLIDCLCKFGGHTEAREILNSMIQSRGNPNVATYGGLLHGYATKG 275

Query: 313 RIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYN 372
            +     +   M   G +     +NI I  Y K   ++EAM  + ++   G+   +I+Y 
Sbjct: 276 DLVEMNNLIDLMVQNGVRPDHHIFNIQIYAYVKCGRLDEAMLTFNKMRQQGLMPDIISYG 335

Query: 373 TLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMN 432
           T++ GL + G+   A   F +M    + PD+  +  LI G       ++A +LF+ +   
Sbjct: 336 TMIDGLCKIGRLDAAMSQFCQMIDDGLSPDIVVFTNLIHGFSMYGKWEKAEELFYEMMDR 395

Query: 433 KFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKA 492
                + +F  +ID L K G++  A  LF  +P   + P VV+Y+ +IHG    GKL++ 
Sbjct: 396 GIRPTVVVFTTMIDKLFKEGKVTEAKTLFDLMPIASVKPNVVSYNAIIHGYFLAGKLDEV 455

Query: 493 NDFLLYMEKNGCAPNVVTFNTLMHGFLQ 520
              L  M   G  PN VTFNTL+   L 
Sbjct: 456 LKLLDDMLSVGLKPNAVTFNTLLDDMLS 483



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 125/428 (29%), Positives = 213/428 (49%), Gaps = 36/428 (8%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
           P + S+  +     K        + + +++  G+ PD +T N +I+       GLC    
Sbjct: 119 PNVVSYTTVIHGFFKEDEVGKAYTLFCEMLDRGIPPDVVTCNSIID-------GLCKVQA 171

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVS-GDYENGLISKT 191
           + +A  + + M    + PD  TY +L++G+  +G L  A+R+ K+M   G   NG+    
Sbjct: 172 MDKAEEVLRQMFDKHIMPDCTTYNSLVHGYLSSGQLKEAVRILKQMSRHGQPPNGV---- 227

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEM-KGRGINPAVVVCTTLIHGFCCAGNWEEVNGL 250
              +YS++ID LCK G   +A+E+   M + RG NP V     L+HG+   G+  E+N L
Sbjct: 228 ---TYSMLIDCLCKFGGHTEAREILNSMIQSRG-NPNVATYGGLLHGYATKGDLVEMNNL 283

Query: 251 FIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCL 310
              M+  G RP+   FN+ I    K G+++EA      M Q+GL PD  +Y +++DG C 
Sbjct: 284 IDLMVQNGVRPDHHIFNIQIYAYVKCGRLDEAMLTFNKMRQQGLMPDIISYGTMIDGLCK 343

Query: 311 VGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVIT 370
           +GR+D A   F  M   G    +V +  LI+G+      E+A  L+ +++  G+R TV+ 
Sbjct: 344 IGRLDAAMSQFCQMIDDGLSPDIVVFTNLIHGFSMYGKWEKAEELFYEMMDRGIRPTVVV 403

Query: 371 YNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKL----- 425
           + T++  LF+ G+   A+ LFD M + +V+P++ +YN +I G      + E +KL     
Sbjct: 404 FTTMIDKLFKEGKVTEAKTLFDLMPIASVKPNVVSYNAIIHGYFLAGKLDEVLKLLDDML 463

Query: 426 ----------FHMLEMNKFEFGIE----IFNCLIDGLCKAGRLDNAWELFHKLPQKGLVP 471
                     F+ L  +    G++      N LID  C+ GR+++   LF ++  K    
Sbjct: 464 SVGLKPNAVTFNTLLDDMLSMGLKPDVATCNTLIDSCCEDGRIEDVLTLFREMLSKAAKT 523

Query: 472 TVVTYSIM 479
             VT +I+
Sbjct: 524 DTVTENII 531



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 97/343 (28%), Positives = 152/343 (44%), Gaps = 32/343 (9%)

Query: 16  VSKVKLSSLFKSPRQIAAVSSPETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPI 75
           +S  +L    +  +Q++    P   +   +  +C        EAR     M   + +P +
Sbjct: 202 LSSGQLKEAVRILKQMSRHGQPPNGVTYSMLIDCLCKFGGHTEAREILNSMIQSRGNPNV 261

Query: 76  SSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKE 135
           +++  L    A       + +    +V  G+ PD    NI I  +       C   R+ E
Sbjct: 262 ATYGGLLHGYATKGDLVEMNNLIDLMVQNGVRPDHHIFNIQIYAYVK-----C--GRLDE 314

Query: 136 ATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFS 195
           A   F  M   G+ PD+I+YGT+I+G C+ G L  A+    +M+    ++GL    +I  
Sbjct: 315 AMLTFNKMRQQGLMPDIISYGTMIDGLCKIGRLDAAMSQFCQMI----DDGL--SPDIVV 368

Query: 196 YSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEML 255
           ++ +I      G  +KA+ELF EM  RGI P VVV TT+I      G   E   LF  M 
Sbjct: 369 FTNLIHGFSMYGKWEKAEELFYEMMDRGIRPTVVVFTTMIDKLFKEGKVTEAKTLFDLMP 428

Query: 256 DLGPRPNLLTFNVMIDCLCKGGKINEA-------------------NGLLELMIQRGLNP 296
               +PN++++N +I      GK++E                    N LL+ M+  GL P
Sbjct: 429 IASVKPNVVSYNAIIHGYFLAGKLDEVLKLLDDMLSVGLKPNAVTFNTLLDDMLSMGLKP 488

Query: 297 DRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNIL 339
           D  T N+L+D  C  GRI+    +F  M SK  K   V+ NI+
Sbjct: 489 DVATCNTLIDSCCEDGRIEDVLTLFREMLSKAAKTDTVTENII 531



 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 67/235 (28%), Positives = 117/235 (49%), Gaps = 5/235 (2%)

Query: 326 SKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAG 385
           SK    T V+Y ILI+  C +  +  A +   QII  G+R   I++  +L  L    +  
Sbjct: 6   SKKVAPTTVTYTILISCCCYVGCLNLAFAALGQIIKTGLRANAISFTPILRTLCAEKRTS 65

Query: 386 YAQKL-FDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHML--EMNKFEFGIEIFN 442
            A  +           PD+ +Y +L+ GLC     +EAV L HM+  + +     +  + 
Sbjct: 66  DAMNIVIRWTPKLGCTPDVFSYTVLLKGLCDEKKCEEAVDLIHMMAEDGDHCPPNVVSYT 125

Query: 443 CLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKN 502
            +I G  K   +  A+ LF ++  +G+ P VVT + +I GLC+   ++KA + L  M   
Sbjct: 126 TVIHGFFKEDEVGKAYTLFCEMLDRGIPPDVVTCNSIIDGLCKVQAMDKAEEVLRQMFDK 185

Query: 503 GCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAK 557
              P+  T+N+L+HG+L + +  + V +L +M+       P+  T+S+++D L K
Sbjct: 186 HIMPDCTTYNSLVHGYLSSGQLKEAVRILKQMS--RHGQPPNGVTYSMLIDCLCK 238



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 78/300 (26%), Positives = 126/300 (42%), Gaps = 40/300 (13%)

Query: 291 QRGLNPDRFTYNSLMDGYCLVG-----------------------------------RID 315
            + + P   TY  L+   C VG                                   R  
Sbjct: 6   SKKVAPTTVTYTILISCCCYVGCLNLAFAALGQIIKTGLRANAISFTPILRTLCAEKRTS 65

Query: 316 TAREIFLSMHSK-GCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNG--VRQTVITYN 372
            A  I +    K GC   V SY +L+ G C     EEA+ L   +  +G      V++Y 
Sbjct: 66  DAMNIVIRWTPKLGCTPDVFSYTVLLKGLCDEKKCEEAVDLIHMMAEDGDHCPPNVVSYT 125

Query: 373 TLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMN 432
           T++ G F+  + G A  LF EM    + PD+ T N +IDGLCK   + +A ++   +   
Sbjct: 126 TVIHGFFKEDEVGKAYTLFCEMLDRGIPPDVVTCNSIIDGLCKVQAMDKAEEVLRQMFDK 185

Query: 433 KFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKA 492
                   +N L+ G   +G+L  A  +  ++ + G  P  VTYS++I  LC+ G   +A
Sbjct: 186 HIMPDCTTYNSLVHGYLSSGQLKEAVRILKQMSRHGQPPNGVTYSMLIDCLCKFGGHTEA 245

Query: 493 NDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVV 552
            + L  M ++   PNV T+  L+HG+       ++  L+  M   +  + PD   F+I +
Sbjct: 246 REILNSMIQSRGNPNVATYGGLLHGYATKGDLVEMNNLIDLMV--QNGVRPDHHIFNIQI 303



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/121 (23%), Positives = 61/121 (50%), Gaps = 1/121 (0%)

Query: 441 FNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKA-NDFLLYM 499
           +  LI   C  G L+ A+    ++ + GL    ++++ ++  LC + +   A N  + + 
Sbjct: 16  YTILISCCCYVGCLNLAFAALGQIIKTGLRANAISFTPILRTLCAEKRTSDAMNIVIRWT 75

Query: 500 EKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDE 559
            K GC P+V ++  L+ G     K  + V+L+H MAE   +  P+  +++ V+    K++
Sbjct: 76  PKLGCTPDVFSYTVLLKGLCDEKKCEEAVDLIHMMAEDGDHCPPNVVSYTTVIHGFFKED 135

Query: 560 K 560
           +
Sbjct: 136 E 136


>gi|224157081|ref|XP_002337799.1| predicted protein [Populus trichocarpa]
 gi|222869732|gb|EEF06863.1| predicted protein [Populus trichocarpa]
          Length = 367

 Score =  204 bits (520), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 121/365 (33%), Positives = 194/365 (53%), Gaps = 6/365 (1%)

Query: 152 VITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDK 211
           ++TY TLI  +CR G L  A  +   M     + GL  K ++F+Y+ II+ LCK+G   +
Sbjct: 1   MVTYNTLIGAYCREGLLEEAFEIMNSMA----DKGL--KPSLFTYNAIINGLCKKGRYAR 54

Query: 212 AKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMID 271
           AK + +EM   G++P      TL+   C   N+ E   +F EML  G  P+L++F+ ++ 
Sbjct: 55  AKGILIEMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMA 114

Query: 272 CLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKH 331
              +   +++A      M + GL PD   Y  LM GYC  G +  A +I   M  +GC  
Sbjct: 115 VFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVL 174

Query: 332 TVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLF 391
            V++YN ++NG CK   + +A  L+ +++  G      T+ TL+ G  Q G    A  LF
Sbjct: 175 DVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLF 234

Query: 392 DEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKA 451
             M   N++PD+  YN LIDG CK   +++A +L+  +   K       +  LI+  C  
Sbjct: 235 GTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSV 294

Query: 452 GRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTF 511
           G +  A+ L+  + +KG+ PT+VT + +I G CR G   KA++FL  M   G AP+ +++
Sbjct: 295 GHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISY 354

Query: 512 NTLMH 516
           NTL++
Sbjct: 355 NTLIN 359



 Score =  202 bits (513), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 109/361 (30%), Positives = 195/361 (54%), Gaps = 2/361 (0%)

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
           + +Y+ +I + C+EGL+++A E+   M  +G+ P++     +I+G C  G +    G+ I
Sbjct: 1   MVTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILI 60

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
           EML++G  P+  T+N ++   C+    +EA  +   M+++G+ PD  +++SLM  +    
Sbjct: 61  EMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNR 120

Query: 313 RIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYN 372
            +D A   F  M   G     V Y +L++GYC+  N+ EA+ +  +++  G    VI YN
Sbjct: 121 HLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYN 180

Query: 373 TLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMN 432
           T+L+GL +      A KLFDEM      PD  T+  LI G C++  + +A+ LF  +   
Sbjct: 181 TILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQR 240

Query: 433 KFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKA 492
             +  I  +N LIDG CK G ++ A EL+  +  + + P  +TY I+I+  C  G + +A
Sbjct: 241 NIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEA 300

Query: 493 NDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVV 552
                 M + G  P +VT NT++ G+ ++  +SK  E L +M    + + PD  +++ ++
Sbjct: 301 FRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMI--AKGVAPDHISYNTLI 358

Query: 553 D 553
           +
Sbjct: 359 N 359



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 103/346 (29%), Positives = 176/346 (50%), Gaps = 13/346 (3%)

Query: 77  SFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEA 136
           ++N L GA  +    +        +   GL P   T N +IN       GLC + R   A
Sbjct: 3   TYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIIN-------GLCKKGRYARA 55

Query: 137 TWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSY 196
             +   M+  G+ PD  TY TL+   CR  N S A  +  +M+      G++   ++ S+
Sbjct: 56  KGILIEMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEML----RQGVVP--DLVSF 109

Query: 197 SIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLD 256
           S ++    +   +D+A   F +MK  G+ P  V+ T L+HG+C  GN  E   +  EML+
Sbjct: 110 SSLMAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLE 169

Query: 257 LGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDT 316
            G   +++ +N +++ LCK   + +A+ L + M++RG  PD +T+ +L+ G+C  G +  
Sbjct: 170 QGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTK 229

Query: 317 AREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLS 376
           A  +F +M  +  K  +V+YN LI+G+CK+  +E+A  L+  +IS  +    ITY  L++
Sbjct: 230 ALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILIN 289

Query: 377 GLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEA 422
                G    A +L+D M    ++P L T N +I G C++    +A
Sbjct: 290 AYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKA 335



 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 111/363 (30%), Positives = 179/363 (49%), Gaps = 36/363 (9%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
           N  +   C+ G+  L EA      M      P + ++N +   + K   Y        ++
Sbjct: 5   NTLIGAYCREGL--LEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEM 62

Query: 102 VSIGLLPDFLTLNILI-------------NCFGNKERGLCV--------------ENR-I 133
           ++IGL PD  T N L+               FG   R   V               NR +
Sbjct: 63  LNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNRHL 122

Query: 134 KEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNI 193
            +A   F++M  FG+ PD + Y  L++G+CR GN+  AL++  +M+    E G +   ++
Sbjct: 123 DQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEML----EQGCV--LDV 176

Query: 194 FSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIE 253
            +Y+ I++ LCKE ++  A +LF EM  RG  P     TTLIHG C  GN  +   LF  
Sbjct: 177 IAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGT 236

Query: 254 MLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGR 313
           M     +P+++ +N +ID  CK G++ +A+ L + MI R + P+  TY  L++ YC VG 
Sbjct: 237 MTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGH 296

Query: 314 IDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNT 373
           +  A  ++  M  KG K T+V+ N +I GYC+  +  +A     ++I+ GV    I+YNT
Sbjct: 297 VSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNT 356

Query: 374 LLS 376
           L++
Sbjct: 357 LIN 359



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 94/302 (31%), Positives = 149/302 (49%), Gaps = 36/302 (11%)

Query: 33  AVSSPETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYD 92
            +S   T  N  L E+C+    N +EA+  FG M      P + SF+ L    ++NRH D
Sbjct: 66  GLSPDTTTYNTLLVESCRRD--NFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNRHLD 123

Query: 93  AVISFYRKLVSIGLLPDFLTLNILINCF---GN-----KER------------------- 125
             + ++R +   GL+PD +   +L++ +   GN     K R                   
Sbjct: 124 QALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTIL 183

Query: 126 -GLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYE 184
            GLC E  + +A  LF  M+  G  PD  T+ TLI+G C+ GN++ AL L   M   +  
Sbjct: 184 NGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNI- 242

Query: 185 NGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNW 244
                K +I +Y+ +ID  CK G ++KA EL+  M  R I P  +    LI+ +C  G+ 
Sbjct: 243 -----KPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHV 297

Query: 245 EEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSL 304
            E   L+  M++ G +P L+T N +I   C+ G  ++A+  L  MI +G+ PD  +YN+L
Sbjct: 298 SEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTL 357

Query: 305 MD 306
           ++
Sbjct: 358 IN 359



 Score = 46.2 bits (108), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 28/114 (24%), Positives = 57/114 (50%), Gaps = 2/114 (1%)

Query: 473 VVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLH 532
           +VTY+ +I   CR+G LE+A + +  M   G  P++ T+N +++G  +  + ++   +L 
Sbjct: 1   MVTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILI 60

Query: 533 KMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKSSYRACLYVTIFQPSSL 586
           +M      L PD TT++ ++    + + + E   +     R  +   +   SSL
Sbjct: 61  EMLNI--GLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSL 112


>gi|147834641|emb|CAN60904.1| hypothetical protein VITISV_016343 [Vitis vinifera]
          Length = 580

 Score =  204 bits (520), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 117/379 (30%), Positives = 198/379 (52%), Gaps = 8/379 (2%)

Query: 186 GLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWE 245
           GL  K N+ SY+ II      G ++ A+ +   M+ +GI P      +LI G C  G  E
Sbjct: 201 GLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLE 260

Query: 246 EVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLM 305
           E +GLF +M+++G  PN +T+N +ID  C  G +  A    + M+++G+ P   TYN L+
Sbjct: 261 EASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLV 320

Query: 306 DGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVR 365
               + GR+  A ++   M  KG     ++YNILINGY +  N + A  L+ +++S G+ 
Sbjct: 321 HALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKRAFDLHNEMLSKGIE 380

Query: 366 QTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKL 425
            T +TY +L+  L +  +   A  LF+++    V PD+  +N +IDG C N  V+ A  L
Sbjct: 381 PTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMIDGHCANGNVERAFML 440

Query: 426 FHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCR 485
              ++          FN L+ G C+ G+++ A  L  ++  +G+ P  ++Y+ +I G  R
Sbjct: 441 LKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKXRGIKPDHISYNTLISGYGR 500

Query: 486 KGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDD 545
           +G ++ A      M   G  P ++T+N L+    +N +     ELL +M    + + PDD
Sbjct: 501 RGDIKDAFXVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMV--NKGISPDD 558

Query: 546 TTF-SIV-----VDLLAKD 558
           +T+ S++     VD L +D
Sbjct: 559 STYLSLIEGMGNVDTLVED 577



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 117/390 (30%), Positives = 202/390 (51%), Gaps = 6/390 (1%)

Query: 129 VENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLI 188
           +E ++K+A      M   G +P+V++Y T+I+G+   GN+  A R+   M     E    
Sbjct: 185 LEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIE---- 240

Query: 189 SKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVN 248
              + ++Y  +I  +CKEG +++A  LF +M   G+ P  V   TLI G+C  G+ E   
Sbjct: 241 --PDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAF 298

Query: 249 GLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGY 308
               EM+  G  P++ T+N+++  L   G++ EA+ +++ M ++G+ PD  TYN L++GY
Sbjct: 299 SYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGY 358

Query: 309 CLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTV 368
              G    A ++   M SKG + T V+Y  LI    +   ++EA  L+ +I+  GV   V
Sbjct: 359 SRCGNAKRAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDV 418

Query: 369 ITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHM 428
           I +N ++ G    G    A  L  EM   +V PD  T+N L+ G C+   V+EA  L   
Sbjct: 419 IMFNAMIDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDE 478

Query: 429 LEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGK 488
           ++    +     +N LI G  + G + +A+ +  ++   G  PT++TY+ +I  LC+  +
Sbjct: 479 MKXRGIKPDHISYNTLISGYGRRGDIKDAFXVRDEMLSIGFNPTLLTYNALIKCLCKNQE 538

Query: 489 LEKANDFLLYMEKNGCAPNVVTFNTLMHGF 518
            + A + L  M   G +P+  T+ +L+ G 
Sbjct: 539 GDLAEELLKEMVNKGISPDDSTYLSLIEGM 568



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 114/393 (29%), Positives = 198/393 (50%), Gaps = 48/393 (12%)

Query: 56  LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNI 115
           L +AR F G+M  +   P + S+N +    +   + +        +   G+ PD  T   
Sbjct: 189 LKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGS 248

Query: 116 LINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLH 175
           LI+       G+C E R++EA+ LF  M+  G+ P+ +TY TLI+G+C  G+L  A    
Sbjct: 249 LIS-------GMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYR 301

Query: 176 KKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLI 235
            +MV    + G++   ++ +Y++++ +L  EG + +A ++  EM+ +GI P  +    LI
Sbjct: 302 DEMV----KKGIMP--SVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILI 355

Query: 236 HGFCCAGN-----------------------------------WEEVNGLFIEMLDLGPR 260
           +G+   GN                                    +E + LF ++LD G  
Sbjct: 356 NGYSRCGNAKRAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVS 415

Query: 261 PNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREI 320
           P+++ FN MID  C  G +  A  LL+ M ++ + PD  T+N+LM G C  G+++ AR +
Sbjct: 416 PDVIMFNAMIDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARML 475

Query: 321 FLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQ 380
              M  +G K   +SYN LI+GY +  ++++A  +  +++S G   T++TYN L+  L +
Sbjct: 476 LDEMKXRGIKPDHISYNTLISGYGRRGDIKDAFXVRDEMLSIGFNPTLLTYNALIKCLCK 535

Query: 381 AGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGL 413
             +   A++L  EM    + PD STY  LI+G+
Sbjct: 536 NQEGDLAEELLKEMVNKGISPDDSTYLSLIEGM 568



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 126/406 (31%), Positives = 199/406 (49%), Gaps = 19/406 (4%)

Query: 78  FNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEAT 137
           F+LL G + K R +   I F   L   G  P+ ++ N +I+  G   RG      I+ A 
Sbjct: 182 FDLLEGKLKKAREF---IGFMEGL---GFKPNVVSYNTIIH--GYSSRG-----NIEGAR 228

Query: 138 WLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYS 197
            +   M   G+ PD  TYG+LI+G C+ G L  A  L  KMV    E GL+   N  +Y+
Sbjct: 229 RILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMV----EIGLVP--NAVTYN 282

Query: 198 IIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDL 257
            +ID  C +G +++A     EM  +GI P+V     L+H     G   E + +  EM   
Sbjct: 283 TLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKK 342

Query: 258 GPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTA 317
           G  P+ +T+N++I+   + G    A  L   M+ +G+ P   TY SL+       R+  A
Sbjct: 343 GIIPDAITYNILINGYSRCGNAKRAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEA 402

Query: 318 REIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSG 377
            ++F  +  +G    V+ +N +I+G+C   NVE A  L +++    V    +T+NTL+ G
Sbjct: 403 DDLFEKILDQGVSPDVIMFNAMIDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQG 462

Query: 378 LFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFG 437
             + G+   A+ L DEMK   ++PD  +YN LI G  +   +++A  +   +    F   
Sbjct: 463 RCREGKVEEARMLLDEMKXRGIKPDHISYNTLISGYGRRGDIKDAFXVRDEMLSIGFNPT 522

Query: 438 IEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGL 483
           +  +N LI  LCK    D A EL  ++  KG+ P   TY  +I G+
Sbjct: 523 LLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGM 568



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 78/267 (29%), Positives = 133/267 (49%), Gaps = 2/267 (0%)

Query: 287 ELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKI 346
           EL  +  L+ DR +  S +    L G++  ARE    M   G K  VVSYN +I+GY   
Sbjct: 162 ELFDELTLSRDRLSVKSSIVFDLLEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSR 221

Query: 347 LNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTY 406
            N+E A  +   +   G+     TY +L+SG+ + G+   A  LFD+M    + P+  TY
Sbjct: 222 GNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTY 281

Query: 407 NILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQ 466
           N LIDG C    ++ A      +        +  +N L+  L   GR+  A ++  ++ +
Sbjct: 282 NTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRK 341

Query: 467 KGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSK 526
           KG++P  +TY+I+I+G  R G  ++A D    M   G  P  VT+ +L++   + N+  +
Sbjct: 342 KGIIPDAITYNILINGYSRCGNAKRAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKE 401

Query: 527 VVELLHKMAEPERNLVPDDTTFSIVVD 553
             +L  K+   ++ + PD   F+ ++D
Sbjct: 402 ADDLFEKIL--DQGVSPDVIMFNAMID 426


>gi|15226343|ref|NP_178283.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75216739|sp|Q9ZUA2.1|PP141_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g01740
 gi|4220475|gb|AAD12698.1| hypothetical protein [Arabidopsis thaliana]
 gi|330250397|gb|AEC05491.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 559

 Score =  204 bits (520), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 132/522 (25%), Positives = 245/522 (46%), Gaps = 30/522 (5%)

Query: 40  QLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYR 99
            +++ ++ NC  GI++L     F  Y+     +P  SSFN +   V K            
Sbjct: 27  HIHQLINSNC--GILSLK----FLAYLVSRGYTPHRSSFNSVVSFVCKLGQVKFAEDIVH 80

Query: 100 KLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIA---FGVRPDVITYG 156
            +   G  PD ++ N LI+       G C    I+ A+ + +++ A   F  +PD++++ 
Sbjct: 81  SMPRFGCEPDVISYNSLID-------GHCRNGDIRSASLVLESLRASHGFICKPDIVSFN 133

Query: 157 TLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELF 216
           +L NGF +   L         M+            N+ +YS  ID+ CK G +  A + F
Sbjct: 134 SLFNGFSKMKMLDEVFVYMGVMLK-------CCSPNVVTYSTWIDTFCKSGELQLALKSF 186

Query: 217 LEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKG 276
             MK   ++P VV  T LI G+C AG+ E    L+ EM  +    N++T+  +ID  CK 
Sbjct: 187 HSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKK 246

Query: 277 GKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSY 336
           G++  A  +   M++  + P+   Y +++DG+   G  D A +    M ++G +  + +Y
Sbjct: 247 GEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAY 306

Query: 337 NILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKL 396
            ++I+G C    ++EA  +   +  + +   ++ + T+++  F++G+   A  ++ ++  
Sbjct: 307 GVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIE 366

Query: 397 YNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDN 456
              EPD+   + +IDG+ KN  + EA+  F + + N       ++  LID LCK G    
Sbjct: 367 RGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKANDV-----MYTVLIDALCKEGDFIE 421

Query: 457 AWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMH 516
              LF K+ + GLVP    Y+  I GLC++G L  A      M + G   +++ + TL++
Sbjct: 422 VERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIY 481

Query: 517 GFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKD 558
           G        +  ++  +M      + PD   F +++    K+
Sbjct: 482 GLASKGLMVEARQVFDEMLNS--GISPDSAVFDLLIRAYEKE 521



 Score =  178 bits (452), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 126/477 (26%), Positives = 226/477 (47%), Gaps = 38/477 (7%)

Query: 42  NEFLHENCKSGIIN-----LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVIS 96
           N  +  +C++G I      L   R   G++      P I SFN LF   +K +  D V  
Sbjct: 95  NSLIDGHCRNGDIRSASLVLESLRASHGFICK----PDIVSFNSLFNGFSKMKMLDEV-- 148

Query: 97  FYRKLVSIGLL-----PDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPD 151
                V +G++     P+ +T +  I+ F       C    ++ A   F +M    + P+
Sbjct: 149 ----FVYMGVMLKCCSPNVVTYSTWIDTF-------CKSGELQLALKSFHSMKRDALSPN 197

Query: 152 VITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDK 211
           V+T+  LI+G+C+ G+L VA+ L+K+M        +    N+ +Y+ +ID  CK+G + +
Sbjct: 198 VVTFTCLIDGYCKAGDLEVAVSLYKEM------RRVRMSLNVVTYTALIDGFCKKGEMQR 251

Query: 212 AKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMID 271
           A+E++  M    + P  +V TT+I GF   G+ +       +ML+ G R ++  + V+I 
Sbjct: 252 AEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIIS 311

Query: 272 CLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKH 331
            LC  GK+ EA  ++E M +  L PD   + ++M+ Y   GR+  A  ++  +  +G + 
Sbjct: 312 GLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEP 371

Query: 332 TVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLF 391
            VV+ + +I+G  K   + EA+  +    +N V      Y  L+  L + G     ++LF
Sbjct: 372 DVVALSTMIDGIAKNGQLHEAIVYFCIEKANDV-----MYTVLIDALCKEGDFIEVERLF 426

Query: 392 DEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKA 451
            ++    + PD   Y   I GLCK   + +A KL   +        +  +  LI GL   
Sbjct: 427 SKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASK 486

Query: 452 GRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNV 508
           G +  A ++F ++   G+ P    + ++I    ++G +  A+D LL M++ G    V
Sbjct: 487 GLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAAASDLLLDMQRRGLVTAV 543



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 98/347 (28%), Positives = 178/347 (51%), Gaps = 10/347 (2%)

Query: 222 RGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINE 281
           RG  P      +++   C  G  +    +   M   G  P+++++N +ID  C+ G I  
Sbjct: 50  RGYTPHRSSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRS 109

Query: 282 ANGLLE-LMIQRGL--NPDRFTYNSLMDGYCLVGRIDTAREIFLSMHS--KGCKHTVVSY 336
           A+ +LE L    G    PD  ++NSL +G+  +  +D   E+F+ M    K C   VV+Y
Sbjct: 110 ASLVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLD---EVFVYMGVMLKCCSPNVVTY 166

Query: 337 NILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKL 396
           +  I+ +CK   ++ A+  +  +  + +   V+T+  L+ G  +AG    A  L+ EM+ 
Sbjct: 167 STWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRR 226

Query: 397 YNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDN 456
             +  ++ TY  LIDG CK   +Q A +++  +  ++ E    ++  +IDG  + G  DN
Sbjct: 227 VRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDN 286

Query: 457 AWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMH 516
           A +   K+  +G+   +  Y ++I GLC  GKL++A + +  MEK+   P++V F T+M+
Sbjct: 287 AMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMN 346

Query: 517 GFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
            + ++ +    V + HK+ E  R   PD    S ++D +AK+ + HE
Sbjct: 347 AYFKSGRMKAAVNMYHKLIE--RGFEPDVVALSTMIDGIAKNGQLHE 391



 Score =  105 bits (261), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 83/346 (23%), Positives = 153/346 (44%), Gaps = 21/346 (6%)

Query: 23  SLFKSPRQIAAVSSPETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLF 82
           SL+K  R++  +S         +   CK G   +  A   +  M   +  P    +  + 
Sbjct: 219 SLYKEMRRVR-MSLNVVTYTALIDGFCKKG--EMQRAEEMYSRMVEDRVEPNSLVYTTII 275

Query: 83  GAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKN 142
               +    D  + F  K+++ G+  D     ++I+       GLC   ++KEAT + ++
Sbjct: 276 DGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIIS-------GLCGNGKLKEATEIVED 328

Query: 143 MIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDS 202
           M    + PD++ + T++N + ++G +  A+ ++ K++   +E       ++ + S +ID 
Sbjct: 329 MEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFE------PDVVALSTMIDG 382

Query: 203 LCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPN 262
           + K G + +A   F   K        V+ T LI   C  G++ EV  LF ++ + G  P+
Sbjct: 383 IAKNGQLHEAIVYFCIEKAND-----VMYTVLIDALCKEGDFIEVERLFSKISEAGLVPD 437

Query: 263 LLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFL 322
              +   I  LCK G + +A  L   M+Q GL  D   Y +L+ G    G +  AR++F 
Sbjct: 438 KFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFD 497

Query: 323 SMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTV 368
            M + G       +++LI  Y K  N+  A  L   +   G+   V
Sbjct: 498 EMLNSGISPDSAVFDLLIRAYEKEGNMAAASDLLLDMQRRGLVTAV 543


>gi|297837133|ref|XP_002886448.1| hypothetical protein ARALYDRAFT_475066 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297332289|gb|EFH62707.1| hypothetical protein ARALYDRAFT_475066 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 332

 Score =  204 bits (520), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 112/294 (38%), Positives = 162/294 (55%), Gaps = 13/294 (4%)

Query: 101 LVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLIN 160
           +V  G   D +  N L+N       GLC E R+ EA  L   M+  G +P+ +TYGT++N
Sbjct: 1   MVEKGCQHDVVAFNTLMN-------GLCREGRVLEAEALVDRMVENGHQPNEVTYGTIVN 53

Query: 161 GFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMK 220
           G C+ G+   AL L +KM           K ++  Y+ IID LCK+G   KA+ LF EM 
Sbjct: 54  GMCKMGDTDSALNLLRKMDESHI------KADVVIYTAIIDRLCKDGHHSKAQNLFTEMH 107

Query: 221 GRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKIN 280
            +GI P V+    +I G C  G W +   L  +M++    P+++TFN +I+   K GKI+
Sbjct: 108 DKGIFPNVLTYNCMIDGCCSYGKWTDAEQLLRDMIESNVDPDVVTFNALINAFVKEGKIS 167

Query: 281 EANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILI 340
           EA  L   M+ R + PD  TYNSL+DG+C   R+D A+ IF  M SKG    V++ N LI
Sbjct: 168 EAEELYREMLGRNIFPDTITYNSLIDGFCKHSRLDDAKHIFDLMVSKGGSPNVITINTLI 227

Query: 341 NGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEM 394
            G C+   V++ + L  +++  G+    ++YNTL+ G  QAG    AQ LF EM
Sbjct: 228 GGCCRAKRVDDGIKLLHEMLRRGLVPDSVSYNTLIHGFCQAGDLNAAQDLFQEM 281



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 93/281 (33%), Positives = 150/281 (53%)

Query: 219 MKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGK 278
           M  +G    VV   TL++G C  G   E   L   M++ G +PN +T+  +++ +CK G 
Sbjct: 1   MVEKGCQHDVVAFNTLMNGLCREGRVLEAEALVDRMVENGHQPNEVTYGTIVNGMCKMGD 60

Query: 279 INEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNI 338
            + A  LL  M +  +  D   Y +++D  C  G    A+ +F  MH KG    V++YN 
Sbjct: 61  TDSALNLLRKMDESHIKADVVIYTAIIDRLCKDGHHSKAQNLFTEMHDKGIFPNVLTYNC 120

Query: 339 LINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYN 398
           +I+G C      +A  L R +I + V   V+T+N L++   + G+   A++L+ EM   N
Sbjct: 121 MIDGCCSYGKWTDAEQLLRDMIESNVDPDVVTFNALINAFVKEGKISEAEELYREMLGRN 180

Query: 399 VEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAW 458
           + PD  TYN LIDG CK++ + +A  +F ++        +   N LI G C+A R+D+  
Sbjct: 181 IFPDTITYNSLIDGFCKHSRLDDAKHIFDLMVSKGGSPNVITINTLIGGCCRAKRVDDGI 240

Query: 459 ELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYM 499
           +L H++ ++GLVP  V+Y+ +IHG C+ G L  A D    M
Sbjct: 241 KLLHEMLRRGLVPDSVSYNTLIHGFCQAGDLNAAQDLFQEM 281



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 102/338 (30%), Positives = 176/338 (52%), Gaps = 13/338 (3%)

Query: 254 MLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGR 313
           M++ G + +++ FN +++ LC+ G++ EA  L++ M++ G  P+  TY ++++G C +G 
Sbjct: 1   MVEKGCQHDVVAFNTLMNGLCREGRVLEAEALVDRMVENGHQPNEVTYGTIVNGMCKMGD 60

Query: 314 IDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNT 373
            D+A  +   M     K  VV Y  +I+  CK  +  +A +L+ ++   G+   V+TYN 
Sbjct: 61  TDSALNLLRKMDESHIKADVVIYTAIIDRLCKDGHHSKAQNLFTEMHDKGIFPNVLTYNC 120

Query: 374 LLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLF-HMLEMN 432
           ++ G    G+   A++L  +M   NV+PD+ T+N LI+   K   + EA +L+  ML  N
Sbjct: 121 MIDGCCSYGKWTDAEQLLRDMIESNVDPDVVTFNALINAFVKEGKISEAEELYREMLGRN 180

Query: 433 KFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKA 492
            F   I  +N LIDG CK  RLD+A  +F  +  KG  P V+T + +I G CR  +++  
Sbjct: 181 IFPDTI-TYNSLIDGFCKHSRLDDAKHIFDLMVSKGGSPNVITINTLIGGCCRAKRVDDG 239

Query: 493 NDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVV 552
              L  M + G  P+ V++NTL+HGF Q    +   +L  +M    R          I++
Sbjct: 240 IKLLHEMLRRGLVPDSVSYNTLIHGFCQAGDLNAAQDLFQEMISQVR---------WILI 290

Query: 553 DLLAKDEKYHECSAVSKSSYRACLYVTIFQPSSLGSMI 590
            LL       EC+ V + +       +I  PS +  ++
Sbjct: 291 LLLITSSSSMECARVIRWTKHGIW--SIVSPSMVWKLV 326



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 100/285 (35%), Positives = 150/285 (52%), Gaps = 6/285 (2%)

Query: 143 MIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDS 202
           M+  G + DV+ + TL+NG CR G +  A  L  +MV    ENG   + N  +Y  I++ 
Sbjct: 1   MVEKGCQHDVVAFNTLMNGLCREGRVLEAEALVDRMV----ENG--HQPNEVTYGTIVNG 54

Query: 203 LCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPN 262
           +CK G  D A  L  +M    I   VV+ T +I   C  G+  +   LF EM D G  PN
Sbjct: 55  MCKMGDTDSALNLLRKMDESHIKADVVIYTAIIDRLCKDGHHSKAQNLFTEMHDKGIFPN 114

Query: 263 LLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFL 322
           +LT+N MID  C  GK  +A  LL  MI+  ++PD  T+N+L++ +   G+I  A E++ 
Sbjct: 115 VLTYNCMIDGCCSYGKWTDAEQLLRDMIESNVDPDVVTFNALINAFVKEGKISEAEELYR 174

Query: 323 SMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAG 382
            M  +      ++YN LI+G+CK   +++A  ++  ++S G    VIT NTL+ G  +A 
Sbjct: 175 EMLGRNIFPDTITYNSLIDGFCKHSRLDDAKHIFDLMVSKGGSPNVITINTLIGGCCRAK 234

Query: 383 QAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFH 427
           +     KL  EM    + PD  +YN LI G C+   +  A  LF 
Sbjct: 235 RVDDGIKLLHEMLRRGLVPDSVSYNTLIHGFCQAGDLNAAQDLFQ 279



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 81/275 (29%), Positives = 142/275 (51%)

Query: 190 KTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNG 249
           + ++ +++ +++ LC+EG V +A+ L   M   G  P  V   T+++G C  G+ +    
Sbjct: 7   QHDVVAFNTLMNGLCREGRVLEAEALVDRMVENGHQPNEVTYGTIVNGMCKMGDTDSALN 66

Query: 250 LFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYC 309
           L  +M +   + +++ +  +ID LCK G  ++A  L   M  +G+ P+  TYN ++DG C
Sbjct: 67  LLRKMDESHIKADVVIYTAIIDRLCKDGHHSKAQNLFTEMHDKGIFPNVLTYNCMIDGCC 126

Query: 310 LVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVI 369
             G+   A ++   M        VV++N LIN + K   + EA  LYR+++   +    I
Sbjct: 127 SYGKWTDAEQLLRDMIESNVDPDVVTFNALINAFVKEGKISEAEELYREMLGRNIFPDTI 186

Query: 370 TYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHML 429
           TYN+L+ G  +  +   A+ +FD M      P++ T N LI G C+   V + +KL H +
Sbjct: 187 TYNSLIDGFCKHSRLDDAKHIFDLMVSKGGSPNVITINTLIGGCCRAKRVDDGIKLLHEM 246

Query: 430 EMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKL 464
                      +N LI G C+AG L+ A +LF ++
Sbjct: 247 LRRGLVPDSVSYNTLIHGFCQAGDLNAAQDLFQEM 281



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 76/287 (26%), Positives = 143/287 (49%), Gaps = 15/287 (5%)

Query: 41  LNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRK 100
            N  ++  C+ G   + EA      M      P   ++  +   + K    D+ ++  RK
Sbjct: 13  FNTLMNGLCREG--RVLEAEALVDRMVENGHQPNEVTYGTIVNGMCKMGDTDSALNLLRK 70

Query: 101 LVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLIN 160
           +    +  D +    +I+        LC +    +A  LF  M   G+ P+V+TY  +I+
Sbjct: 71  MDESHIKADVVIYTAIID-------RLCKDGHHSKAQNLFTEMHDKGIFPNVLTYNCMID 123

Query: 161 GFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMK 220
           G C  G  + A +L + M+  + +       ++ +++ +I++  KEG + +A+EL+ EM 
Sbjct: 124 GCCSYGKWTDAEQLLRDMIESNVD------PDVVTFNALINAFVKEGKISEAEELYREML 177

Query: 221 GRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKIN 280
           GR I P  +   +LI GFC     ++   +F  M+  G  PN++T N +I   C+  +++
Sbjct: 178 GRNIFPDTITYNSLIDGFCKHSRLDDAKHIFDLMVSKGGSPNVITINTLIGGCCRAKRVD 237

Query: 281 EANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSK 327
           +   LL  M++RGL PD  +YN+L+ G+C  G ++ A+++F  M S+
Sbjct: 238 DGIKLLHEMLRRGLVPDSVSYNTLIHGFCQAGDLNAAQDLFQEMISQ 284


>gi|449440401|ref|XP_004137973.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g32630-like [Cucumis sativus]
          Length = 606

 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 131/443 (29%), Positives = 228/443 (51%), Gaps = 20/443 (4%)

Query: 76  SSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKE 135
           S F  L  A+ ++ + +  + F R++V  G+     +   +++       GLC +  +  
Sbjct: 159 SCFEFLL-ALKRSGNMELCVEFLRQMVDSGIEIRVCSWTAVVD-------GLCKKGEVVR 210

Query: 136 ATWLFKNMIAFGVRPDVITYGTLINGFCR---TGNLSVALRLHKKMVSGDYENGLISKTN 192
           A  L   ++  G +P VITY TL+NG+      G ++  L L +K V  DY        N
Sbjct: 211 AKALMDELVCKGFKPSVITYNTLLNGYIEIKDVGGVNEILSLMEKNVV-DY--------N 261

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
           + +Y+++I+   +   +++A++LF EM  +GI P V + T++I+  C  GN +    LF 
Sbjct: 262 VTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFD 321

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
           EM +    PN  T+  +I+  CK G++  A  ++  M  +G++ +R  +N+LMDGYC  G
Sbjct: 322 EMTERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKG 381

Query: 313 RIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYN 372
            ID A  +   M  KG +    + NI+ +G+C+    EEA  L   +   GV   V++++
Sbjct: 382 MIDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNVVSFS 441

Query: 373 TLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMN 432
            L+    +      A++LF  M+     P + TYN  I+  CK   ++EA KL + ++  
Sbjct: 442 ILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQER 501

Query: 433 KFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKA 492
                   +  LIDG   +G +D A ELF+++PQ GL   VVTY+++I GL + G+ ++A
Sbjct: 502 GLMPDTYTYTSLIDGERASGNVDRALELFNEMPQLGLNRNVVTYTVIISGLSKDGRADEA 561

Query: 493 NDFLLYMEKNGCAPNVVTFNTLM 515
                 M K G  P+   +++L+
Sbjct: 562 FKLYDEMNKEGIVPDDGIYSSLI 584



 Score =  188 bits (477), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 129/494 (26%), Positives = 237/494 (47%), Gaps = 27/494 (5%)

Query: 70  QPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPD------FLTLNILINCFGNK 123
           +PS      ++LF     NR +D+ +  +      G   D      FL   + +   GN 
Sbjct: 117 EPSIVEKFCDMLFRVYMDNRMFDSSLEVFDYARKKGFEIDERSCFEFL---LALKRSGNM 173

Query: 124 ERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDY 183
           E  LCVE          + M+  G+   V ++  +++G C+ G +  A  L  ++V   +
Sbjct: 174 E--LCVE--------FLRQMVDSGIEIRVCSWTAVVDGLCKKGEVVRAKALMDELVCKGF 223

Query: 184 ENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGN 243
                 K ++ +Y+ +++   +   V    E+   M+   ++  V   T LI  +  +  
Sbjct: 224 ------KPSVITYNTLLNGYIEIKDVGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSK 277

Query: 244 WEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNS 303
            EE   LF EML  G  P++  +  +I+  CK G +  A  L + M +R L P+ +TY +
Sbjct: 278 IEEAEKLFDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGA 337

Query: 304 LMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNG 363
           L++G C  G +  A  +   M SKG     V +N L++GYCK   ++EA+ L   +   G
Sbjct: 338 LINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQKG 397

Query: 364 VRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAV 423
                 T N + SG  ++ +   A++L   M+   V P++ +++ILID  CK     EA 
Sbjct: 398 FEIDAFTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEAR 457

Query: 424 KLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGL 483
           +LF ++E       +  +N  I+  CK G+++ A++L +++ ++GL+P   TY+ +I G 
Sbjct: 458 RLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSLIDGE 517

Query: 484 CRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVP 543
              G +++A +    M + G   NVVT+  ++ G  ++ +  +  +L  +M   +  +VP
Sbjct: 518 RASGNVDRALELFNEMPQLGLNRNVVTYTVIISGLSKDGRADEAFKLYDEMN--KEGIVP 575

Query: 544 DDTTFSIVVDLLAK 557
           DD  +S ++  L K
Sbjct: 576 DDGIYSSLIASLHK 589



 Score =  131 bits (330), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 81/298 (27%), Positives = 148/298 (49%), Gaps = 2/298 (0%)

Query: 272 CLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKH 331
            L + G +      L  M+  G+     ++ +++DG C  G +  A+ +   +  KG K 
Sbjct: 166 ALKRSGNMELCVEFLRQMVDSGIEIRVCSWTAVVDGLCKKGEVVRAKALMDELVCKGFKP 225

Query: 332 TVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLF 391
           +V++YN L+NGY +I +V     +   +  N V   V TY  L+    ++ +   A+KLF
Sbjct: 226 SVITYNTLLNGYIEIKDVGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKLF 285

Query: 392 DEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKA 451
           DEM    +EPD+  Y  +I+  CK   ++ A  LF  +   +       +  LI+G CKA
Sbjct: 286 DEMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALINGACKA 345

Query: 452 GRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTF 511
           G +  A  + + +  KG+    V ++ ++ G C+KG +++A      M++ G   +  T 
Sbjct: 346 GEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQKGFEIDAFTC 405

Query: 512 NTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSK 569
           N +  GF ++N+  +   LL  M E  R + P+  +FSI++D+  K++ + E   + K
Sbjct: 406 NIIASGFCRSNRREEAKRLLLTMEE--RGVAPNVVSFSILIDIYCKEQNFAEARRLFK 461



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 74/235 (31%), Positives = 113/235 (48%), Gaps = 13/235 (5%)

Query: 78  FNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEAT 137
           FN L     K    D  +     +   G   D  T NI+ +       G C  NR +EA 
Sbjct: 370 FNTLMDGYCKKGMIDEALRLQNIMQQKGFEIDAFTCNIIAS-------GFCRSNRREEAK 422

Query: 138 WLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYS 197
            L   M   GV P+V+++  LI+ +C+  N + A RL K M             ++ +Y+
Sbjct: 423 RLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKKG------KAPSVVTYN 476

Query: 198 IIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDL 257
             I+  CK+G +++A +L  EM+ RG+ P     T+LI G   +GN +    LF EM  L
Sbjct: 477 AFIERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSLIDGERASGNVDRALELFNEMPQL 536

Query: 258 GPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
           G   N++T+ V+I  L K G+ +EA  L + M + G+ PD   Y+SL+     VG
Sbjct: 537 GLNRNVVTYTVIISGLSKDGRADEAFKLYDEMNKEGIVPDDGIYSSLIASLHKVG 591



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 51/185 (27%), Positives = 85/185 (45%), Gaps = 13/185 (7%)

Query: 58  EARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILI 117
           EA+     M     +P + SF++L     K +++      ++ +   G  P  +T N  I
Sbjct: 420 EAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFI 479

Query: 118 NCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKK 177
             +       C + +++EA  L   M   G+ PD  TY +LI+G   +GN+  AL L  +
Sbjct: 480 ERY-------CKKGKMEEAYKLINEMQERGLMPDTYTYTSLIDGERASGNVDRALELFNE 532

Query: 178 MVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHG 237
           M        L    N+ +Y++II  L K+G  D+A +L+ EM   GI P   + ++LI  
Sbjct: 533 MPQ------LGLNRNVVTYTVIISGLSKDGRADEAFKLYDEMNKEGIVPDDGIYSSLIAS 586

Query: 238 FCCAG 242
               G
Sbjct: 587 LHKVG 591



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 41/153 (26%), Positives = 65/153 (42%), Gaps = 13/153 (8%)

Query: 55  NLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLN 114
           N  EAR  F  M     +P + ++N       K    +       ++   GL+PD  T  
Sbjct: 452 NFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQERGLMPDTYTYT 511

Query: 115 ILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRL 174
            LI+  G +  G      +  A  LF  M   G+  +V+TY  +I+G  + G    A +L
Sbjct: 512 SLID--GERASG-----NVDRALELFNEMPQLGLNRNVVTYTVIISGLSKDGRADEAFKL 564

Query: 175 HKKMVSGDYENGLISKTNIFSYSIIIDSLCKEG 207
           + +M     + G++    I  YS +I SL K G
Sbjct: 565 YDEM----NKEGIVPDDGI--YSSLIASLHKVG 591


>gi|224075357|ref|XP_002304600.1| predicted protein [Populus trichocarpa]
 gi|222842032|gb|EEE79579.1| predicted protein [Populus trichocarpa]
          Length = 641

 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 119/442 (26%), Positives = 236/442 (53%), Gaps = 20/442 (4%)

Query: 75  ISSFNLLFGAVAKNRHYDAVISFYRKLVS---IGLLPDFLTLNILINCFGNKERGLCVEN 131
           + SFN +   + +   +   + FY  ++    + + P+ LT N++I       + +C   
Sbjct: 131 VKSFNSVLNVIIQEGLFYRALEFYNHVIGAKGVNISPNVLTFNLVI-------KTMCKVG 183

Query: 132 RIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKM-VSGDYENGLISK 190
            + +A  +F++M     +PDV TY TL++G C+   +  A+ L  +M + G + + +   
Sbjct: 184 LVDDAVQMFRDMPVSKCQPDVYTYCTLMDGLCKADRIDEAVSLLDEMQIDGCFPSPV--- 240

Query: 191 TNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGL 250
               +++++I+ LCK+G + +  +L   M  +G  P  V   TLIHG C  G  E+   L
Sbjct: 241 ----TFNVLINGLCKKGDLARVAKLVDNMFLKGCAPNEVTYNTLIHGLCLKGKLEKAISL 296

Query: 251 FIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCL 310
              M+     PN++T+  +I+ L K G+  +   +L LM +RG + + + Y++L+ G   
Sbjct: 297 LDRMVSSKCVPNVVTYGTIINGLVKQGRALDGARVLALMEERGYHVNEYVYSALISGLFK 356

Query: 311 VGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVIT 370
            G+   A ++F  M  K C+   + Y+ +I+G C+    +EA+ +  ++ +N  +    T
Sbjct: 357 EGKSQEAMQLFKEMTVKECELNTIVYSAVIDGLCRDGKPDEALEVLSEMTNNRCKPNAYT 416

Query: 371 YNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLE 430
           Y++L+ G F+AG    A +++ +M  +N   +   Y++LI GLCK+  V+EA+ ++  + 
Sbjct: 417 YSSLMKGFFEAGNGHKAIEMWKDMAKHNFTQNEVCYSVLIHGLCKDGKVKEAMMVWAQML 476

Query: 431 MNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKL--PQKGLVPTVVTYSIMIHGLCRKGK 488
               +  +  +  +I+GL  AG +++A +L++++   +    P VVTY+I+++ LC++  
Sbjct: 477 GKGCKPDVVAYGSMINGLSNAGLVEDALQLYNEMLCQEPDSQPDVVTYNILLNALCKQSS 536

Query: 489 LEKANDFLLYMEKNGCAPNVVT 510
           + +A D L  M   GC P++VT
Sbjct: 537 ISRAIDLLNSMLDRGCDPDLVT 558



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 123/425 (28%), Positives = 217/425 (51%), Gaps = 4/425 (0%)

Query: 134 KEATWLFKNMI-AFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
           ++A  LF  M   F  +  V ++ +++N   + G    AL  +  ++      G+    N
Sbjct: 112 EKAVGLFDRMAYEFECKRTVKSFNSVLNVIIQEGLFYRALEFYNHVIGA---KGVNISPN 168

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
           + +++++I ++CK GLVD A ++F +M      P V    TL+ G C A   +E   L  
Sbjct: 169 VLTFNLVIKTMCKVGLVDDAVQMFRDMPVSKCQPDVYTYCTLMDGLCKADRIDEAVSLLD 228

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
           EM   G  P+ +TFNV+I+ LCK G +     L++ M  +G  P+  TYN+L+ G CL G
Sbjct: 229 EMQIDGCFPSPVTFNVLINGLCKKGDLARVAKLVDNMFLKGCAPNEVTYNTLIHGLCLKG 288

Query: 313 RIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYN 372
           +++ A  +   M S  C   VV+Y  +ING  K     +   +   +   G       Y+
Sbjct: 289 KLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGARVLALMEERGYHVNEYVYS 348

Query: 373 TLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMN 432
            L+SGLF+ G++  A +LF EM +   E +   Y+ +IDGLC++    EA+++   +  N
Sbjct: 349 ALISGLFKEGKSQEAMQLFKEMTVKECELNTIVYSAVIDGLCRDGKPDEALEVLSEMTNN 408

Query: 433 KFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKA 492
           + +     ++ L+ G  +AG    A E++  + +       V YS++IHGLC+ GK+++A
Sbjct: 409 RCKPNAYTYSSLMKGFFEAGNGHKAIEMWKDMAKHNFTQNEVCYSVLIHGLCKDGKVKEA 468

Query: 493 NDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVV 552
                 M   GC P+VV + ++++G          ++L ++M   E +  PD  T++I++
Sbjct: 469 MMVWAQMLGKGCKPDVVAYGSMINGLSNAGLVEDALQLYNEMLCQEPDSQPDVVTYNILL 528

Query: 553 DLLAK 557
           + L K
Sbjct: 529 NALCK 533



 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 137/468 (29%), Positives = 225/468 (48%), Gaps = 40/468 (8%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CK G+++  +A   F  M   +  P + ++  L   + K    D  +S   ++   G  P
Sbjct: 180 CKVGLVD--DAVQMFRDMPVSKCQPDVYTYCTLMDGLCKADRIDEAVSLLDEMQIDGCFP 237

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
             +T N+LIN       GLC +  +     L  NM   G  P+ +TY TLI+G C  G L
Sbjct: 238 SPVTFNVLIN-------GLCKKGDLARVAKLVDNMFLKGCAPNEVTYNTLIHGLCLKGKL 290

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEG-LVDKAKELFLEMKGRGINPA 227
             A+ L  +MVS           N+ +Y  II+ L K+G  +D A+ L L M+ RG +  
Sbjct: 291 EKAISLLDRMVSSK------CVPNVVTYGTIINGLVKQGRALDGARVLAL-MEERGYHVN 343

Query: 228 VVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLE 287
             V + LI G    G  +E   LF EM       N + ++ +ID LC+ GK +EA  +L 
Sbjct: 344 EYVYSALISGLFKEGKSQEAMQLFKEMTVKECELNTIVYSAVIDGLCRDGKPDEALEVLS 403

Query: 288 LMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKIL 347
            M      P+ +TY+SLM G+   G    A E++  M         V Y++LI+G CK  
Sbjct: 404 EMTNNRCKPNAYTYSSLMKGFFEAGNGHKAIEMWKDMAKHNFTQNEVCYSVLIHGLCKDG 463

Query: 348 NVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEM--KLYNVEPDLST 405
            V+EAM ++ Q++  G +  V+ Y ++++GL  AG    A +L++EM  +  + +PD+ T
Sbjct: 464 KVKEAMMVWAQMLGKGCKPDVVAYGSMINGLSNAGLVEDALQLYNEMLCQEPDSQPDVVT 523

Query: 406 YNILIDGLCKNNCVQEAVKLFHML---------------------EMNKFEFGIEIFNCL 444
           YNIL++ LCK + +  A+ L + +                     +++  + G E  + L
Sbjct: 524 YNILLNALCKQSSISRAIDLLNSMLDRGCDPDLVTCIIFLRTLREKLDPPQDGREFLDGL 583

Query: 445 IDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKA 492
           +  L K  R+  A ++   + QK L P   T++ ++  LC   K++ A
Sbjct: 584 VVRLLKRQRVLGASKIVEVMLQKLLPPKPSTWTRVVEDLCNPKKVQAA 631



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 71/316 (22%), Positives = 147/316 (46%), Gaps = 38/316 (12%)

Query: 13  SETVSKVKLSSLFKSPRQIAAV------SSPETQLNEFLHEN-----CKSGIINLNEARY 61
           +E V    +S LFK  +   A+      +  E +LN  ++       C+ G    +EA  
Sbjct: 343 NEYVYSALISGLFKEGKSQEAMQLFKEMTVKECELNTIVYSAVIDGLCRDG--KPDEALE 400

Query: 62  FFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFG 121
               MT+ +  P   +++ L     +  +    I  ++ +       + +  ++LI+   
Sbjct: 401 VLSEMTNNRCKPNAYTYSSLMKGFFEAGNGHKAIEMWKDMAKHNFTQNEVCYSVLIH--- 457

Query: 122 NKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSG 181
               GLC + ++KEA  ++  M+  G +PDV+ YG++ING    G +  AL+L+ +M+  
Sbjct: 458 ----GLCKDGKVKEAMMVWAQMLGKGCKPDVVAYGSMINGLSNAGLVEDALQLYNEMLCQ 513

Query: 182 DYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCA 241
           + +    S+ ++ +Y+I++++LCK+  + +A +L   M  RG +P +V C   +      
Sbjct: 514 EPD----SQPDVVTYNILLNALCKQSSISRAIDLLNSMLDRGCDPDLVTCIIFLR----- 564

Query: 242 GNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTY 301
                      E LD  P+      + ++  L K  ++  A+ ++E+M+Q+ L P   T+
Sbjct: 565 --------TLREKLD-PPQDGREFLDGLVVRLLKRQRVLGASKIVEVMLQKLLPPKPSTW 615

Query: 302 NSLMDGYCLVGRIDTA 317
             +++  C   ++  A
Sbjct: 616 TRVVEDLCNPKKVQAA 631


>gi|225432035|ref|XP_002273694.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Vitis vinifera]
          Length = 666

 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 129/431 (29%), Positives = 219/431 (50%), Gaps = 13/431 (3%)

Query: 130 ENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLIS 189
           ENR +    ++ NM   G+ P+V TY  L+   C+   +  A +L  +M S   +   + 
Sbjct: 159 ENRFQMINPIYSNMKKDGMEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEV- 217

Query: 190 KTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNG 249
                SY+ +I SLCK G V +A+EL +        P+V V   LI+G C    +EE   
Sbjct: 218 -----SYTTLISSLCKLGKVKEARELAM-----SFTPSVPVYNALINGVCKEYTFEEAFQ 267

Query: 250 LFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYC 309
           L  EM++ G  PN++++  +I+ L   G +  +  +L  M  RG +P+  T+ SL+ G+ 
Sbjct: 268 LLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFF 327

Query: 310 LVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVI 369
           L G    A + +  M  +G    VV+YN L++G C   ++ +A+S++ Q+  NG    V 
Sbjct: 328 LKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVR 387

Query: 370 TYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHML 429
           TY+ L+ G  +AG    A ++++ M  +   P++  Y  ++D LC+N+   +A  L   +
Sbjct: 388 TYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENM 447

Query: 430 EMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKL 489
           ++         FN  I GLC +GR+D A ++F ++   G  P   TY+ ++  L +  + 
Sbjct: 448 QVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRF 507

Query: 490 EKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFS 549
            +A   +  ME  G   N+VT+NT+++G+       + +ELL KM    R   PD  T +
Sbjct: 508 GEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMV--VRGTKPDAITVN 565

Query: 550 IVVDLLAKDEK 560
           IV+D   K  K
Sbjct: 566 IVIDAYCKQGK 576



 Score =  202 bits (514), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 132/480 (27%), Positives = 228/480 (47%), Gaps = 20/480 (4%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
           P + ++N+L  A+ KN   D       ++ S G  PD ++   LI+        LC   +
Sbjct: 179 PNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLIS-------SLCKLGK 231

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
           +KEA  L     A    P V  Y  LING C+      A +L  +M++   +       N
Sbjct: 232 VKEAREL-----AMSFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGID------PN 280

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
           + SY+ II++L   G V+ +  +  +M  RG +P +   T+LI GF   G   E    + 
Sbjct: 281 VISYTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWD 340

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
            M+  G  PN++ +N ++  LC    + +A  +   M   G  P+  TY++L+DGY   G
Sbjct: 341 RMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAG 400

Query: 313 RIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYN 372
            +D A E++  M + GC   VV+Y  +++  C+     +A  L   +         +T+N
Sbjct: 401 DLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFN 460

Query: 373 TLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMN 432
           T + GL  +G+  +A K+FD+M      P+ +TYN L+D L K+    EA  L   +E  
Sbjct: 461 TFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHR 520

Query: 433 KFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKA 492
             E  +  +N +I G C AG L  A EL  K+  +G  P  +T +I+I   C++GK+  A
Sbjct: 521 GIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIA 580

Query: 493 NDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVV 552
              +  +      P+++ + +L+ G   +    + +  L +M      + P+  T++++V
Sbjct: 581 IQLMDRLSAGKWHPDIIAYTSLISGICTHIGVEEAIVYLRRML--SEGISPNVATWNVLV 638



 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 112/406 (27%), Positives = 192/406 (47%), Gaps = 42/406 (10%)

Query: 199 IIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLG 258
           +I S  + G  ++A + F  M+   + P V +   ++        ++ +N ++  M   G
Sbjct: 117 VIGSYRRAGSSEQALKTFYRMQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKKDG 176

Query: 259 PRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAR 318
             PN+ T+N+++  LCK  +++ A+ LL  M  +G +PD  +Y +L+   C +G++  AR
Sbjct: 177 MEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEAR 236

Query: 319 EIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNT----- 373
           E+ +S        +V  YN LING CK    EEA  L  ++++ G+   VI+Y T     
Sbjct: 237 ELAMSFTP-----SVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINAL 291

Query: 374 ------------------------------LLSGLFQAGQAGYAQKLFDEMKLYNVEPDL 403
                                         L+ G F  G +  A   +D M    V P++
Sbjct: 292 SDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNV 351

Query: 404 STYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHK 463
             YN L+ GLC    + +AV +F+ +E+N     +  ++ LIDG  KAG LD A E+++ 
Sbjct: 352 VAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNW 411

Query: 464 LPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNK 523
           +   G  P VV Y+ M+  LCR     +A   +  M+   C PN VTFNT + G   + +
Sbjct: 412 MITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGR 471

Query: 524 TSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSK 569
               +++  +M        P+ TT++ ++D L KD ++ E   + K
Sbjct: 472 VDWAIKVFDQMGN--SGCFPNTTTYNELLDSLLKDRRFGEAFGLVK 515



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 96/356 (26%), Positives = 167/356 (46%), Gaps = 51/356 (14%)

Query: 72  SPPISSF-NLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVE 130
           SP + +F +L+ G   K   ++A + F+ +++  G++P+ +  N L++       GLC +
Sbjct: 313 SPNLHTFTSLIKGFFLKGGSHEA-LDFWDRMIREGVVPNVVAYNALMH-------GLCSK 364

Query: 131 NRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISK 190
             + +A  +F  M   G  P+V TY  LI+G+ + G+L  A  +   M++          
Sbjct: 365 RSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHG------CH 418

Query: 191 TNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGL 250
            N+ +Y+ ++D LC+  + ++A  L   M+     P  V   T I G C +G  +    +
Sbjct: 419 PNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKV 478

Query: 251 FIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGL------------------------- 285
           F +M + G  PN  T+N ++D L K  +  EA GL                         
Sbjct: 479 FDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCC 538

Query: 286 -------LEL---MIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVS 335
                  LEL   M+ RG  PD  T N ++D YC  G+++ A ++   + +      +++
Sbjct: 539 AGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIA 598

Query: 336 YNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQ-AGQAGYAQKL 390
           Y  LI+G C  + VEEA+   R+++S G+   V T+N L+  LF   G +G  Q L
Sbjct: 599 YTSLISGICTHIGVEEAIVYLRRMLSEGISPNVATWNVLVRHLFSNMGHSGAVQFL 654



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 81/300 (27%), Positives = 142/300 (47%), Gaps = 17/300 (5%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
           N  +H  C     +L +A   F  M      P + +++ L    AK    D     +  +
Sbjct: 355 NALMHGLCSKR--SLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWM 412

Query: 102 VSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLING 161
           ++ G  P+ +    +++        LC  +   +A  L +NM      P+ +T+ T I G
Sbjct: 413 ITHGCHPNVVAYTCMVDV-------LCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKG 465

Query: 162 FCRTGNLSVALRLHKKMV-SGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMK 220
            C +G +  A+++  +M  SG +        N  +Y+ ++DSL K+    +A  L  +M+
Sbjct: 466 LCGSGRVDWAIKVFDQMGNSGCF-------PNTTTYNELLDSLLKDRRFGEAFGLVKDME 518

Query: 221 GRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKIN 280
            RGI   +V   T+I+G+CCAG   E   L  +M+  G +P+ +T N++ID  CK GK+N
Sbjct: 519 HRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVN 578

Query: 281 EANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILI 340
            A  L++ +     +PD   Y SL+ G C    ++ A      M S+G    V ++N+L+
Sbjct: 579 IAIQLMDRLSAGKWHPDIIAYTSLISGICTHIGVEEAIVYLRRMLSEGISPNVATWNVLV 638


>gi|449493486|ref|XP_004159312.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g22960, mitochondrial-like [Cucumis sativus]
          Length = 772

 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 133/467 (28%), Positives = 228/467 (48%), Gaps = 17/467 (3%)

Query: 98  YRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGT 157
           + K++  GLLPD    N ++       R L  EN + +A  ++  M  FG++P V+TY T
Sbjct: 168 FDKMIRNGLLPDVKNCNRIL-------RVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNT 220

Query: 158 LINGFCRTGNLSVALRLHKKMVS-GDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELF 216
           +++ +C+ G +  AL L  +M   G Y N +       +Y+++++ L K+G +++AK L 
Sbjct: 221 MLDSYCKEGRVDQALELLSEMQERGCYPNDV-------TYNVLVNGLSKKGELEQAKGLI 273

Query: 217 LEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKG 276
            EM   G+N +      LI+GFC  G + E   L  EM++    P L T+N ++  LCK 
Sbjct: 274 EEMLNSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKW 333

Query: 277 GKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSY 336
            ++         M++    PD  ++NSL+ GYC  G I  A  +F  +  +    TV++Y
Sbjct: 334 VQVTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITY 393

Query: 337 NILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKL 396
           N LI+G C    ++ A+ L +++   G+   + TY  L++G F+ G    A+  F+EM  
Sbjct: 394 NTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLS 453

Query: 397 YNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDN 456
             ++PD   YN  I G  K      A  +   +    F   +  +N  +  LC+ G  + 
Sbjct: 454 KGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEE 513

Query: 457 AWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMH 516
           A +L   +   GL+P  VTY+ +I+G  + G L KA +    M   G AP+VVT+  L+H
Sbjct: 514 ACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIH 573

Query: 517 GFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
                           KM   E+++  +  T++ +++ L    +  E
Sbjct: 574 AHAAKQMLDLAFMYFSKML--EKSVPANVITYNAIINGLCMTRRMDE 618



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 129/501 (25%), Positives = 233/501 (46%), Gaps = 36/501 (7%)

Query: 56  LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNI 115
           L++A+  +G M      P + ++N +  +  K    D  +    ++   G  P+ +T N+
Sbjct: 196 LSKAKNVYGMMEQFGIKPTVVTYNTMLDSYCKEGRVDQALELLSEMQERGCYPNDVTYNV 255

Query: 116 LINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLH 175
           L+N       GL  +  +++A  L + M+  G+     TY  LINGFC+ G    A  L 
Sbjct: 256 LVN-------GLSKKGELEQAKGLIEEMLNSGLNVSAYTYNPLINGFCQKGLFVEAFDLV 308

Query: 176 KKMVSGD---------------------------YENGLISK--TNIFSYSIIIDSLCKE 206
           ++MV+                             + + L SK   +I S++ ++   C+ 
Sbjct: 309 EEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRT 368

Query: 207 GLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTF 266
           G + +A  LF E+K R + P V+   TLIHG C  G  +    L  EM D G  P++ T+
Sbjct: 369 GCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTY 428

Query: 267 NVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHS 326
            ++++   K G ++ A G    M+ +GL PDRF YN+ + G   +     A  +   M +
Sbjct: 429 TILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLA 488

Query: 327 KGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGY 386
            G    V++YN+ ++  C+  N EEA  L   ++S+G+    +TY ++++G  + G    
Sbjct: 489 AGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRK 548

Query: 387 AQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLID 446
           A+++F+EM    V P + TY +LI        +  A   F  +        +  +N +I+
Sbjct: 549 AREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIIN 608

Query: 447 GLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAP 506
           GLC   R+D A++ F ++ +KG++P   +Y+I+I+  C  G  E+A      M      P
Sbjct: 609 GLCMTRRMDEAYKYFDEMEEKGILPNKFSYTILINESCNMGYWEEALRLYREMLDRKIQP 668

Query: 507 NVVTFNTLMHGFLQNNKTSKV 527
           +  T +  +    ++ +   V
Sbjct: 669 DSFTHSVFLKNLHRDYQVHAV 689



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 101/349 (28%), Positives = 171/349 (48%), Gaps = 2/349 (0%)

Query: 215 LFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLC 274
           +F +M   G+ P V  C  ++          +   ++  M   G +P ++T+N M+D  C
Sbjct: 167 VFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDSYC 226

Query: 275 KGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVV 334
           K G++++A  LL  M +RG  P+  TYN L++G    G ++ A+ +   M + G   +  
Sbjct: 227 KEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSAY 286

Query: 335 SYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEM 394
           +YN LING+C+     EA  L  ++++     T+ TYNTL+ GL +  Q    +  F +M
Sbjct: 287 TYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDM 346

Query: 395 KLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRL 454
                 PD+ ++N L+ G C+  C+ EA  LF  L+       +  +N LI GLC  G L
Sbjct: 347 LKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYL 406

Query: 455 DNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTL 514
           D A  L  ++  +GL P + TY+I+++G  + G +  A  F   M   G  P+   +NT 
Sbjct: 407 DAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTR 466

Query: 515 MHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
           + G ++   TS    +  +M        PD  T+++ V  L +   + E
Sbjct: 467 IVGEMKIADTSVAFSMQEEMLAA--GFPPDVITYNVFVHALCQQGNFEE 513


>gi|357167759|ref|XP_003581319.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680-like [Brachypodium distachyon]
          Length = 554

 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 121/422 (28%), Positives = 203/422 (48%), Gaps = 26/422 (6%)

Query: 105 GLLPDFLTLNILINCFGNKERGLCVENRI-----------KEATWLFKNMIAFGVRPDVI 153
           GLLPD  +L +L        RG+ +   +            EA   +  ++  G+ P+  
Sbjct: 133 GLLPDACSLVLLA-----LRRGISLPAPVCSGLMSRLPSTPEAYTFYLQLLDAGMAPETR 187

Query: 154 TYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAK 213
            +  L+  F R G L  A ++  +M           +  + +++ +I  +C+   +D   
Sbjct: 188 LFNVLMRDFVRLGELVSARKVFDEMRRS-------VQPTVVTFNTLISGMCRARDLDAVD 240

Query: 214 ELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCL 273
            L+ EM   G+ P V     LI GFC  G  E    +F EM D G  PN + F  +ID  
Sbjct: 241 GLYKEMSDVGVKPDVYTYGALIKGFCRTGRMENAVKMFNEMRDTGVNPNAVVFTTLIDAH 300

Query: 274 CKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTV 333
           CK G +N    L + M  RG+ PD   YN+L++G C    +  A  I   M + G K   
Sbjct: 301 CKEGNVNAGMDLYQDMRVRGVMPDLVAYNALVNGLCRARNLKAAESIVEEMKNAGLKPDK 360

Query: 334 VSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDE 393
           V+Y  LI+G CK   ++ AM + +++    V    +TY  L+SGL +AG+   A+++  E
Sbjct: 361 VTYTTLIDGCCKDGKLDMAMDIKQKMAEKEVSLDEVTYTALISGLSKAGRPVDAERVLRE 420

Query: 394 MKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGR 453
           M    +EPD +TY ++ID  C+   V+   KL   ++    + G+  +N +++GLCK G+
Sbjct: 421 MMEAALEPDNTTYTMVIDAFCRKGDVKTGFKLLKEMQNKGKKPGVVTYNVIMNGLCKLGQ 480

Query: 454 LDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNT 513
           + NA  L H +   G+ P  +TY+I++ G C+ GK+  + +        G  P+   + +
Sbjct: 481 MKNADMLLHAMLNIGVSPDDITYNILLDGQCKHGKVANSEEL---ESSKGMVPDFAVYTS 537

Query: 514 LM 515
           L+
Sbjct: 538 LI 539



 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 108/383 (28%), Positives = 205/383 (53%), Gaps = 11/383 (2%)

Query: 184 ENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGN 243
           + G+  +T +F+  +++    + G +  A+++F EM+ R + P VV   TLI G C A +
Sbjct: 179 DAGMAPETRLFN--VLMRDFVRLGELVSARKVFDEMR-RSVQPTVVTFNTLISGMCRARD 235

Query: 244 WEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNS 303
            + V+GL+ EM D+G +P++ T+  +I   C+ G++  A  +   M   G+NP+   + +
Sbjct: 236 LDAVDGLYKEMSDVGVKPDVYTYGALIKGFCRTGRMENAVKMFNEMRDTGVNPNAVVFTT 295

Query: 304 LMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNG 363
           L+D +C  G ++   +++  M  +G    +V+YN L+NG C+  N++ A S+  ++ + G
Sbjct: 296 LIDAHCKEGNVNAGMDLYQDMRVRGVMPDLVAYNALVNGLCRARNLKAAESIVEEMKNAG 355

Query: 364 VRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAV 423
           ++   +TY TL+ G  + G+   A  +  +M    V  D  TY  LI GL K     +A 
Sbjct: 356 LKPDKVTYTTLIDGCCKDGKLDMAMDIKQKMAEKEVSLDEVTYTALISGLSKAGRPVDAE 415

Query: 424 KLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGL 483
           ++   +     E     +  +ID  C+ G +   ++L  ++  KG  P VVTY+++++GL
Sbjct: 416 RVLREMMEAALEPDNTTYTMVIDAFCRKGDVKTGFKLLKEMQNKGKKPGVVTYNVIMNGL 475

Query: 484 CRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVP 543
           C+ G+++ A+  L  M   G +P+ +T+N L+ G  ++ K +   EL     E  + +VP
Sbjct: 476 CKLGQMKNADMLLHAMLNIGVSPDDITYNILLDGQCKHGKVANSEEL-----ESSKGMVP 530

Query: 544 DDTTFSIVVDLLAKDEK---YHE 563
           D   ++ ++  LAK +    YH+
Sbjct: 531 DFAVYTSLISELAKKKPAKNYHD 553



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 121/400 (30%), Positives = 201/400 (50%), Gaps = 19/400 (4%)

Query: 96  SFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITY 155
           +FY +L+  G+ P+    N+L+       R       +  A  +F  M    V+P V+T+
Sbjct: 172 TFYLQLLDAGMAPETRLFNVLM-------RDFVRLGELVSARKVFDEM-RRSVQPTVVTF 223

Query: 156 GTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKEL 215
            TLI+G CR  +L     L+K+M      + +  K ++++Y  +I   C+ G ++ A ++
Sbjct: 224 NTLISGMCRARDLDAVDGLYKEM------SDVGVKPDVYTYGALIKGFCRTGRMENAVKM 277

Query: 216 FLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCK 275
           F EM+  G+NP  VV TTLI   C  GN      L+ +M   G  P+L+ +N +++ LC+
Sbjct: 278 FNEMRDTGVNPNAVVFTTLIDAHCKEGNVNAGMDLYQDMRVRGVMPDLVAYNALVNGLCR 337

Query: 276 GGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVS 335
              +  A  ++E M   GL PD+ TY +L+DG C  G++D A +I   M  K      V+
Sbjct: 338 ARNLKAAESIVEEMKNAGLKPDKVTYTTLIDGCCKDGKLDMAMDIKQKMAEKEVSLDEVT 397

Query: 336 YNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMK 395
           Y  LI+G  K     +A  + R+++   +     TY  ++    + G      KL  EM+
Sbjct: 398 YTALISGLSKAGRPVDAERVLREMMEAALEPDNTTYTMVIDAFCRKGDVKTGFKLLKEMQ 457

Query: 396 LYNVEPDLSTYNILIDGLCKNNCVQEAVKLFH-MLEMNKFEFGIEIFNCLIDGLCKAGRL 454
               +P + TYN++++GLCK   ++ A  L H ML +      I  +N L+DG CK G++
Sbjct: 458 NKGKKPGVVTYNVIMNGLCKLGQMKNADMLLHAMLNIGVSPDDI-TYNILLDGQCKHGKV 516

Query: 455 DNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKAND 494
            N+ EL      KG+VP    Y+ +I  L +K   +  +D
Sbjct: 517 ANSEELES---SKGMVPDFAVYTSLISELAKKKPAKNYHD 553



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 111/382 (29%), Positives = 182/382 (47%), Gaps = 39/382 (10%)

Query: 206 EGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLG--P---- 259
           EGL+  A  L L    RGI+    VC+ L+       +  E    ++++LD G  P    
Sbjct: 132 EGLLPDACSLVLLALRRGISLPAPVCSGLMSRL---PSTPEAYTFYLQLLDAGMAPETRL 188

Query: 260 ----------------------------RPNLLTFNVMIDCLCKGGKINEANGLLELMIQ 291
                                       +P ++TFN +I  +C+   ++  +GL + M  
Sbjct: 189 FNVLMRDFVRLGELVSARKVFDEMRRSVQPTVVTFNTLISGMCRARDLDAVDGLYKEMSD 248

Query: 292 RGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEE 351
            G+ PD +TY +L+ G+C  GR++ A ++F  M   G     V +  LI+ +CK  NV  
Sbjct: 249 VGVKPDVYTYGALIKGFCRTGRMENAVKMFNEMRDTGVNPNAVVFTTLIDAHCKEGNVNA 308

Query: 352 AMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILID 411
            M LY+ +   GV   ++ YN L++GL +A     A+ + +EMK   ++PD  TY  LID
Sbjct: 309 GMDLYQDMRVRGVMPDLVAYNALVNGLCRARNLKAAESIVEEMKNAGLKPDKVTYTTLID 368

Query: 412 GLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVP 471
           G CK+  +  A+ +   +   +       +  LI GL KAGR  +A  +  ++ +  L P
Sbjct: 369 GCCKDGKLDMAMDIKQKMAEKEVSLDEVTYTALISGLSKAGRPVDAERVLREMMEAALEP 428

Query: 472 TVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELL 531
              TY+++I   CRKG ++     L  M+  G  P VVT+N +M+G  +  +      LL
Sbjct: 429 DNTTYTMVIDAFCRKGDVKTGFKLLKEMQNKGKKPGVVTYNVIMNGLCKLGQMKNADMLL 488

Query: 532 HKMAEPERNLVPDDTTFSIVVD 553
           H M      + PDD T++I++D
Sbjct: 489 HAML--NIGVSPDDITYNILLD 508



 Score =  175 bits (443), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 114/394 (28%), Positives = 198/394 (50%), Gaps = 26/394 (6%)

Query: 36  SPETQL-NEFLHENCKSGIINLNEARYFFGYMTH-MQPSPPISSFNLLFGAVAKNRHYDA 93
           +PET+L N  + +  + G   L  AR  F  M   +QP+  + +FN L   + + R  DA
Sbjct: 183 APETRLFNVLMRDFVRLG--ELVSARKVFDEMRRSVQPT--VVTFNTLISGMCRARDLDA 238

Query: 94  VISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVI 153
           V   Y+++  +G+ PD  T   LI       +G C   R++ A  +F  M   GV P+ +
Sbjct: 239 VDGLYKEMSDVGVKPDVYTYGALI-------KGFCRTGRMENAVKMFNEMRDTGVNPNAV 291

Query: 154 TYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAK 213
            + TLI+  C+ GN++  + L++ M       G++   ++ +Y+ +++ LC+   +  A+
Sbjct: 292 VFTTLIDAHCKEGNVNAGMDLYQDM----RVRGVMP--DLVAYNALVNGLCRARNLKAAE 345

Query: 214 ELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCL 273
            +  EMK  G+ P  V  TTLI G C  G  +    +  +M +     + +T+  +I  L
Sbjct: 346 SIVEEMKNAGLKPDKVTYTTLIDGCCKDGKLDMAMDIKQKMAEKEVSLDEVTYTALISGL 405

Query: 274 CKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTV 333
            K G+  +A  +L  M++  L PD  TY  ++D +C  G + T  ++   M +KG K  V
Sbjct: 406 SKAGRPVDAERVLREMMEAALEPDNTTYTMVIDAFCRKGDVKTGFKLLKEMQNKGKKPGV 465

Query: 334 VSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDE 393
           V+YN+++NG CK+  ++ A  L   +++ GV    ITYN LL G  + G+   +++L   
Sbjct: 466 VTYNVIMNGLCKLGQMKNADMLLHAMLNIGVSPDDITYNILLDGQCKHGKVANSEELESS 525

Query: 394 MKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFH 427
             +    PD + Y  LI  L K    ++  K +H
Sbjct: 526 KGMV---PDFAVYTSLISELAK----KKPAKNYH 552


>gi|296083214|emb|CBI22850.3| unnamed protein product [Vitis vinifera]
          Length = 724

 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 129/431 (29%), Positives = 219/431 (50%), Gaps = 13/431 (3%)

Query: 130 ENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLIS 189
           ENR +    ++ NM   G+ P+V TY  L+   C+   +  A +L  +M S   +   + 
Sbjct: 159 ENRFQMINPIYSNMKKDGMEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEV- 217

Query: 190 KTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNG 249
                SY+ +I SLCK G V +A+EL +        P+V V   LI+G C    +EE   
Sbjct: 218 -----SYTTLISSLCKLGKVKEARELAM-----SFTPSVPVYNALINGVCKEYTFEEAFQ 267

Query: 250 LFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYC 309
           L  EM++ G  PN++++  +I+ L   G +  +  +L  M  RG +P+  T+ SL+ G+ 
Sbjct: 268 LLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFF 327

Query: 310 LVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVI 369
           L G    A + +  M  +G    VV+YN L++G C   ++ +A+S++ Q+  NG    V 
Sbjct: 328 LKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVR 387

Query: 370 TYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHML 429
           TY+ L+ G  +AG    A ++++ M  +   P++  Y  ++D LC+N+   +A  L   +
Sbjct: 388 TYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENM 447

Query: 430 EMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKL 489
           ++         FN  I GLC +GR+D A ++F ++   G  P   TY+ ++  L +  + 
Sbjct: 448 QVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRF 507

Query: 490 EKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFS 549
            +A   +  ME  G   N+VT+NT+++G+       + +ELL KM    R   PD  T +
Sbjct: 508 GEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMV--VRGTKPDAITVN 565

Query: 550 IVVDLLAKDEK 560
           IV+D   K  K
Sbjct: 566 IVIDAYCKQGK 576



 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 132/480 (27%), Positives = 228/480 (47%), Gaps = 20/480 (4%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
           P + ++N+L  A+ KN   D       ++ S G  PD ++   LI+        LC   +
Sbjct: 179 PNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLIS-------SLCKLGK 231

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
           +KEA  L     A    P V  Y  LING C+      A +L  +M++   +       N
Sbjct: 232 VKEAREL-----AMSFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGID------PN 280

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
           + SY+ II++L   G V+ +  +  +M  RG +P +   T+LI GF   G   E    + 
Sbjct: 281 VISYTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWD 340

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
            M+  G  PN++ +N ++  LC    + +A  +   M   G  P+  TY++L+DGY   G
Sbjct: 341 RMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAG 400

Query: 313 RIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYN 372
            +D A E++  M + GC   VV+Y  +++  C+     +A  L   +         +T+N
Sbjct: 401 DLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFN 460

Query: 373 TLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMN 432
           T + GL  +G+  +A K+FD+M      P+ +TYN L+D L K+    EA  L   +E  
Sbjct: 461 TFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHR 520

Query: 433 KFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKA 492
             E  +  +N +I G C AG L  A EL  K+  +G  P  +T +I+I   C++GK+  A
Sbjct: 521 GIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIA 580

Query: 493 NDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVV 552
              +  +      P+++ + +L+ G   +    + +  L +M      + P+  T++++V
Sbjct: 581 IQLMDRLSAGKWHPDIIAYTSLISGICTHIGVEEAIVYLRRML--SEGISPNVATWNVLV 638



 Score =  185 bits (469), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 112/406 (27%), Positives = 192/406 (47%), Gaps = 42/406 (10%)

Query: 199 IIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLG 258
           +I S  + G  ++A + F  M+   + P V +   ++        ++ +N ++  M   G
Sbjct: 117 VIGSYRRAGSSEQALKTFYRMQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKKDG 176

Query: 259 PRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAR 318
             PN+ T+N+++  LCK  +++ A+ LL  M  +G +PD  +Y +L+   C +G++  AR
Sbjct: 177 MEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEAR 236

Query: 319 EIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNT----- 373
           E+ +S        +V  YN LING CK    EEA  L  ++++ G+   VI+Y T     
Sbjct: 237 ELAMSFTP-----SVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINAL 291

Query: 374 ------------------------------LLSGLFQAGQAGYAQKLFDEMKLYNVEPDL 403
                                         L+ G F  G +  A   +D M    V P++
Sbjct: 292 SDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNV 351

Query: 404 STYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHK 463
             YN L+ GLC    + +AV +F+ +E+N     +  ++ LIDG  KAG LD A E+++ 
Sbjct: 352 VAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNW 411

Query: 464 LPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNK 523
           +   G  P VV Y+ M+  LCR     +A   +  M+   C PN VTFNT + G   + +
Sbjct: 412 MITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGR 471

Query: 524 TSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSK 569
               +++  +M        P+ TT++ ++D L KD ++ E   + K
Sbjct: 472 VDWAIKVFDQMGN--SGCFPNTTTYNELLDSLLKDRRFGEAFGLVK 515



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 96/356 (26%), Positives = 167/356 (46%), Gaps = 51/356 (14%)

Query: 72  SPPISSF-NLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVE 130
           SP + +F +L+ G   K   ++A + F+ +++  G++P+ +  N L++       GLC +
Sbjct: 313 SPNLHTFTSLIKGFFLKGGSHEA-LDFWDRMIREGVVPNVVAYNALMH-------GLCSK 364

Query: 131 NRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISK 190
             + +A  +F  M   G  P+V TY  LI+G+ + G+L  A  +   M++          
Sbjct: 365 RSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHG------CH 418

Query: 191 TNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGL 250
            N+ +Y+ ++D LC+  + ++A  L   M+     P  V   T I G C +G  +    +
Sbjct: 419 PNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKV 478

Query: 251 FIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGL------------------------- 285
           F +M + G  PN  T+N ++D L K  +  EA GL                         
Sbjct: 479 FDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCC 538

Query: 286 -------LEL---MIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVS 335
                  LEL   M+ RG  PD  T N ++D YC  G+++ A ++   + +      +++
Sbjct: 539 AGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIA 598

Query: 336 YNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQ-AGQAGYAQKL 390
           Y  LI+G C  + VEEA+   R+++S G+   V T+N L+  LF   G +G  Q L
Sbjct: 599 YTSLISGICTHIGVEEAIVYLRRMLSEGISPNVATWNVLVRHLFSNMGHSGAVQFL 654


>gi|413915825|gb|AFW21589.1| hypothetical protein ZEAMMB73_481763 [Zea mays]
 gi|413923991|gb|AFW63923.1| hypothetical protein ZEAMMB73_685382 [Zea mays]
          Length = 953

 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 141/494 (28%), Positives = 229/494 (46%), Gaps = 15/494 (3%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
           N  +   CK  + ++  A      MT    S  +  +N L      +   DA      ++
Sbjct: 193 NALIDGYCK--VQDMAAALAVVERMTTQGLSLDVVGYNTLVAGFFYSGDADAAWEVAERM 250

Query: 102 VSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLING 161
            + G+ P  +T   LI  +       C   RI+EA  L++ M+  GV PDV+T   L++G
Sbjct: 251 KADGVEPSVVTHTTLIGEY-------CKMKRIEEAFTLYEGMVRSGVLPDVVTLSALVDG 303

Query: 162 FCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKG 221
            CR G  S A  L ++M      + +    N  +Y   IDSL K   V+++  L  EM  
Sbjct: 304 LCRDGRFSEAYALFREM------DKIGVAPNHVTYCTFIDSLAKVQRVNESLGLLGEMVS 357

Query: 222 RGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINE 281
           RG+   +V+ TT++      G  EE   +    L     PN +T+ V++D  C+ G I+ 
Sbjct: 358 RGVAMDLVMYTTVMDRLGKEGKIEEAKDVLRHALSDNITPNCVTYTVLVDAHCRAGNIDG 417

Query: 282 ANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILIN 341
           A  +L  M ++ ++P+  T++S+++G    G I  A      M   G    VV+Y  LI+
Sbjct: 418 AEQMLLQMEEKSVSPNVVTFSSILNGLVKRGCIAKAAGYMRKMKDSGIAPNVVTYGTLID 477

Query: 342 GYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEP 401
           G+ K    E A+ +YR ++  GV       ++L++GL + G    A+ LF +M    +  
Sbjct: 478 GFFKCQGQEAALDVYRDMLHEGVEANNFIVDSLVNGLRKNGNIEEAEALFKDMGERGLLL 537

Query: 402 DLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELF 461
           D   Y  L+DGL K   +  A+K+   L          ++N  I+ LC+ G+   A    
Sbjct: 538 DHVNYATLMDGLFKTGNMPAALKVGQELMERNLSPDAVVYNVFINCLCRLGKFSEAKSFL 597

Query: 462 HKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQN 521
            ++   GL P   TY+ MI   CR+G   KA   L  M+ +   PN++T+ TL+ G L+ 
Sbjct: 598 KEMRNTGLEPDQATYNTMISAQCREGNTSKALKLLNEMKWSSIKPNLITYTTLVVGLLEA 657

Query: 522 NKTSKVVELLHKMA 535
               K   LL++MA
Sbjct: 658 GVVEKAKYLLNEMA 671



 Score =  191 bits (486), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 137/509 (26%), Positives = 237/509 (46%), Gaps = 51/509 (10%)

Query: 64  GYMTHMQPS---PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCF 120
           GYM  M+ S   P + ++  L     K +  +A +  YR ++  G+  +   ++ L+N  
Sbjct: 455 GYMRKMKDSGIAPNVVTYGTLIDGFFKCQGQEAALDVYRDMLHEGVEANNFIVDSLVN-- 512

Query: 121 GNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVS 180
                GL     I+EA  LFK+M   G+  D + Y TL++G  +TGN+  AL++ ++++ 
Sbjct: 513 -----GLRKNGNIEEAEALFKDMGERGLLLDHVNYATLMDGLFKTGNMPAALKVGQELME 567

Query: 181 GDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCC 240
            +         +   Y++ I+ LC+ G   +AK    EM+  G+ P      T+I   C 
Sbjct: 568 RNLS------PDAVVYNVFINCLCRLGKFSEAKSFLKEMRNTGLEPDQATYNTMISAQCR 621

Query: 241 AGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLL-------------- 286
            GN  +   L  EM     +PNL+T+  ++  L + G + +A  LL              
Sbjct: 622 EGNTSKALKLLNEMKWSSIKPNLITYTTLVVGLLEAGVVEKAKYLLNEMASAGFTPTPLT 681

Query: 287 ---------------------ELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMH 325
                                ELM+  GL+ D   YN+L+   C  G    A  +   M 
Sbjct: 682 YRRVLQACSGSRSPYVILEVHELMMGAGLHADITVYNTLVHVLCCHGMTRKATIVLDEML 741

Query: 326 SKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAG 385
            +G     +++N LI G+CK  +++ A + Y Q++  G+   + T+NTLL GL  AG+ G
Sbjct: 742 GRGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQGLSPNIATFNTLLGGLESAGRIG 801

Query: 386 YAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLI 445
            A  +  EMK   +EP+  TY+IL+ G  K +   EA++L+  +    F      +N LI
Sbjct: 802 EADTVICEMKKMGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLI 861

Query: 446 DGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCA 505
               KAG ++ A ELF ++ ++G++ T  TY I+++G  +     +    L  M++ G  
Sbjct: 862 SDFAKAGMMNQAKELFSEMKRRGVLHTSSTYDILLNGWSKLRNGTEVRILLKDMKELGFK 921

Query: 506 PNVVTFNTLMHGFLQNNKTSKVVELLHKM 534
           P+  T +++   F +   T +   LL  +
Sbjct: 922 PSKGTISSMSRAFSKPGMTWEARRLLKTL 950



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 119/411 (28%), Positives = 201/411 (48%), Gaps = 13/411 (3%)

Query: 149 RP---DVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCK 205
           RP   D +T  ++I  +C    L  AL L +   SG          +  SY+I +  L +
Sbjct: 74  RPVPGDPLTLNSIILSYCSLHALRPALSLLRS-SSGPQPQ---VAADTVSYNIFLAGLSE 129

Query: 206 EGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPN--- 262
           +G    A  +  EM  RG+    V  +T + G    G   E   L  EML  G   +   
Sbjct: 130 QGHGRLAPPVLSEMCKRGVPWDGVTMSTALVGLSRTGLVGEAAAL-AEMLVRGRGIDGLG 188

Query: 263 LLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFL 322
           ++ +N +ID  CK   +  A  ++E M  +GL+ D   YN+L+ G+   G  D A E+  
Sbjct: 189 VVGWNALIDGYCKVQDMAAALAVVERMTTQGLSLDVVGYNTLVAGFFYSGDADAAWEVAE 248

Query: 323 SMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAG 382
            M + G + +VV++  LI  YCK+  +EEA +LY  ++ +GV   V+T + L+ GL + G
Sbjct: 249 RMKADGVEPSVVTHTTLIGEYCKMKRIEEAFTLYEGMVRSGVLPDVVTLSALVDGLCRDG 308

Query: 383 QAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFN 442
           +   A  LF EM    V P+  TY   ID L K   V E++ L   +        + ++ 
Sbjct: 309 RFSEAYALFREMDKIGVAPNHVTYCTFIDSLAKVQRVNESLGLLGEMVSRGVAMDLVMYT 368

Query: 443 CLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKN 502
            ++D L K G+++ A ++        + P  VTY++++   CR G ++ A   LL ME+ 
Sbjct: 369 TVMDRLGKEGKIEEAKDVLRHALSDNITPNCVTYTVLVDAHCRAGNIDGAEQMLLQMEEK 428

Query: 503 GCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
             +PNVVTF+++++G ++    +K    + KM   +  + P+  T+  ++D
Sbjct: 429 SVSPNVVTFSSILNGLVKRGCIAKAAGYMRKMK--DSGIAPNVVTYGTLID 477



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 136/537 (25%), Positives = 235/537 (43%), Gaps = 50/537 (9%)

Query: 56  LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNI 115
           + EA+    +      +P   ++ +L  A  +  + D       ++    + P+ +T + 
Sbjct: 380 IEEAKDVLRHALSDNITPNCVTYTVLVDAHCRAGNIDGAEQMLLQMEEKSVSPNVVTFSS 439

Query: 116 LINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLH 175
           ++N       GL     I +A    + M   G+ P+V+TYGTLI+GF +      AL ++
Sbjct: 440 ILN-------GLVKRGCIAKAAGYMRKMKDSGIAPNVVTYGTLIDGFFKCQGQEAALDVY 492

Query: 176 KKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLI 235
           + M+    E       N F    +++ L K G +++A+ LF +M  RG+    V   TL+
Sbjct: 493 RDMLHEGVE------ANNFIVDSLVNGLRKNGNIEEAEALFKDMGERGLLLDHVNYATLM 546

Query: 236 HGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLN 295
            G    GN      +  E+++    P+ + +NV I+CLC+ GK +EA   L+ M   GL 
Sbjct: 547 DGLFKTGNMPAALKVGQELMERNLSPDAVVYNVFINCLCRLGKFSEAKSFLKEMRNTGLE 606

Query: 296 PDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSL 355
           PD+ TYN+++   C  G    A ++   M     K  +++Y  L+ G  +   VE+A  L
Sbjct: 607 PDQATYNTMISAQCREGNTSKALKLLNEMKWSSIKPNLITYTTLVVGLLEAGVVEKAKYL 666

Query: 356 YRQIISNGVRQTVITY-----------------------------------NTLLSGLFQ 380
             ++ S G   T +TY                                   NTL+  L  
Sbjct: 667 LNEMASAGFTPTPLTYRRVLQACSGSRSPYVILEVHELMMGAGLHADITVYNTLVHVLCC 726

Query: 381 AGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEI 440
            G    A  + DEM    + PD  T+N LI G CK++ +  A   +  +        I  
Sbjct: 727 HGMTRKATIVLDEMLGRGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQGLSPNIAT 786

Query: 441 FNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYME 500
           FN L+ GL  AGR+  A  +  ++ + GL P  +TY I++ G  +K    +A      M 
Sbjct: 787 FNTLLGGLESAGRIGEADTVICEMKKMGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMV 846

Query: 501 KNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAK 557
             G  P   T+N+L+  F +    ++  EL  +M    R ++   +T+ I+++  +K
Sbjct: 847 SKGFIPKASTYNSLISDFAKAGMMNQAKELFSEMK--RRGVLHTSSTYDILLNGWSK 901



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 117/432 (27%), Positives = 198/432 (45%), Gaps = 6/432 (1%)

Query: 126 GLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYEN 185
           GL  +   + A  +   M   GV  D +T  T + G  RTG +  A  L + +V G   +
Sbjct: 126 GLSEQGHGRLAPPVLSEMCKRGVPWDGVTMSTALVGLSRTGLVGEAAALAEMLVRGRGID 185

Query: 186 GLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWE 245
           GL     +  ++ +ID  CK   +  A  +   M  +G++  VV   TL+ GF  +G+ +
Sbjct: 186 GL----GVVGWNALIDGYCKVQDMAAALAVVERMTTQGLSLDVVGYNTLVAGFFYSGDAD 241

Query: 246 EVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLM 305
               +   M   G  P+++T   +I   CK  +I EA  L E M++ G+ PD  T ++L+
Sbjct: 242 AAWEVAERMKADGVEPSVVTHTTLIGEYCKMKRIEEAFTLYEGMVRSGVLPDVVTLSALV 301

Query: 306 DGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVR 365
           DG C  GR   A  +F  M   G     V+Y   I+   K+  V E++ L  +++S GV 
Sbjct: 302 DGLCRDGRFSEAYALFREMDKIGVAPNHVTYCTFIDSLAKVQRVNESLGLLGEMVSRGVA 361

Query: 366 QTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKL 425
             ++ Y T++  L + G+   A+ +       N+ P+  TY +L+D  C+   +  A ++
Sbjct: 362 MDLVMYTTVMDRLGKEGKIEEAKDVLRHALSDNITPNCVTYTVLVDAHCRAGNIDGAEQM 421

Query: 426 FHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCR 485
              +E       +  F+ +++GL K G +  A     K+   G+ P VVTY  +I G  +
Sbjct: 422 LLQMEEKSVSPNVVTFSSILNGLVKRGCIAKAAGYMRKMKDSGIAPNVVTYGTLIDGFFK 481

Query: 486 KGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDD 545
               E A D    M   G   N    ++L++G  +N    +   L   M   ER L+ D 
Sbjct: 482 CQGQEAALDVYRDMLHEGVEANNFIVDSLVNGLRKNGNIEEAEALFKDMG--ERGLLLDH 539

Query: 546 TTFSIVVDLLAK 557
             ++ ++D L K
Sbjct: 540 VNYATLMDGLFK 551



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 116/457 (25%), Positives = 183/457 (40%), Gaps = 74/457 (16%)

Query: 40  QLNEFLHENCKSGII---NLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVIS 96
           + N F+ ++  +G+    N+ EA   F  M          ++  L   + K  +  A + 
Sbjct: 501 EANNFIVDSLVNGLRKNGNIEEAEALFKDMGERGLLLDHVNYATLMDGLFKTGNMPAALK 560

Query: 97  FYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYG 156
             ++L+   L PD +  N+ INC       LC   +  EA    K M   G+ PD  TY 
Sbjct: 561 VGQELMERNLSPDAVVYNVFINC-------LCRLGKFSEAKSFLKEMRNTGLEPDQATYN 613

Query: 157 TLINGFCRTGNLSVALRLHKKM---------------VSGDYENGLISKT---------- 191
           T+I+  CR GN S AL+L  +M               V G  E G++ K           
Sbjct: 614 TMISAQCREGNTSKALKLLNEMKWSSIKPNLITYTTLVVGLLEAGVVEKAKYLLNEMASA 673

Query: 192 ---------------------------------------NIFSYSIIIDSLCKEGLVDKA 212
                                                  +I  Y+ ++  LC  G+  KA
Sbjct: 674 GFTPTPLTYRRVLQACSGSRSPYVILEVHELMMGAGLHADITVYNTLVHVLCCHGMTRKA 733

Query: 213 KELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDC 272
             +  EM GRGI P  +    LI G C + + +     + +ML  G  PN+ TFN ++  
Sbjct: 734 TIVLDEMLGRGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQGLSPNIATFNTLLGG 793

Query: 273 LCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHT 332
           L   G+I EA+ ++  M + GL P+  TY+ L+ GY        A  ++  M SKG    
Sbjct: 794 LESAGRIGEADTVICEMKKMGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPK 853

Query: 333 VVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFD 392
             +YN LI+ + K   + +A  L+ ++   GV  T  TY+ LL+G  +       + L  
Sbjct: 854 ASTYNSLISDFAKAGMMNQAKELFSEMKRRGVLHTSSTYDILLNGWSKLRNGTEVRILLK 913

Query: 393 EMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHML 429
           +MK    +P   T + +     K     EA +L   L
Sbjct: 914 DMKELGFKPSKGTISSMSRAFSKPGMTWEARRLLKTL 950



 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 77/253 (30%), Positives = 118/253 (46%), Gaps = 15/253 (5%)

Query: 39  TQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFY 98
           T  N  +H  C  G+    +A      M     +P   +FN L     K+ H D   + Y
Sbjct: 715 TVYNTLVHVLCCHGMTR--KATIVLDEMLGRGIAPDTITFNALILGHCKSSHLDNAFATY 772

Query: 99  RKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTL 158
            +++  GL P+  T N L+        GL    RI EA  +   M   G+ P+ +TY  L
Sbjct: 773 AQMLHQGLSPNIATFNTLLG-------GLESAGRIGEADTVICEMKKMGLEPNNLTYDIL 825

Query: 159 INGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLE 218
           + G+ +  N   ALRL+ +MVS     G I K +  +Y+ +I    K G++++AKELF E
Sbjct: 826 VTGYAKKSNKVEALRLYCEMVS----KGFIPKAS--TYNSLISDFAKAGMMNQAKELFSE 879

Query: 219 MKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGK 278
           MK RG+         L++G+    N  EV  L  +M +LG +P+  T + M     K G 
Sbjct: 880 MKRRGVLHTSSTYDILLNGWSKLRNGTEVRILLKDMKELGFKPSKGTISSMSRAFSKPGM 939

Query: 279 INEANGLLELMIQ 291
             EA  LL+ + +
Sbjct: 940 TWEARRLLKTLFK 952


>gi|449531231|ref|XP_004172591.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g32630-like, partial [Cucumis sativus]
          Length = 602

 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 131/443 (29%), Positives = 228/443 (51%), Gaps = 20/443 (4%)

Query: 76  SSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKE 135
           S F  L  A+ ++ + +  + F R++V  G+     +   +++       GLC +  +  
Sbjct: 155 SCFEFLL-ALKRSGNMELCVEFLRQMVDSGIEIRVCSWTAVVD-------GLCKKGEVVR 206

Query: 136 ATWLFKNMIAFGVRPDVITYGTLINGFCR---TGNLSVALRLHKKMVSGDYENGLISKTN 192
           A  L   ++  G +P VITY TL+NG+      G ++  L L +K V  DY        N
Sbjct: 207 AKALMDELVCKGFKPSVITYNTLLNGYIEIKDVGGVNEILSLMEKNVV-DY--------N 257

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
           + +Y+++I+   +   +++A++LF EM  +GI P V + T++I+  C  GN +    LF 
Sbjct: 258 VTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFD 317

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
           EM +    PN  T+  +I+  CK G++  A  ++  M  +G++ +R  +N+LMDGYC  G
Sbjct: 318 EMTERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKG 377

Query: 313 RIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYN 372
            ID A  +   M  KG +    + NI+ +G+C+    EEA  L   +   GV   V++++
Sbjct: 378 MIDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNVVSFS 437

Query: 373 TLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMN 432
            L+    +      A++LF  M+     P + TYN  I+  CK   ++EA KL + ++  
Sbjct: 438 ILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQER 497

Query: 433 KFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKA 492
                   +  LIDG   +G +D A ELF+++PQ GL   VVTY+++I GL + G+ ++A
Sbjct: 498 GLMPDTYTYTSLIDGERASGNVDRALELFNEMPQLGLNRNVVTYTVIISGLSKDGRADEA 557

Query: 493 NDFLLYMEKNGCAPNVVTFNTLM 515
                 M K G  P+   +++L+
Sbjct: 558 FKLYDEMNKEGIVPDDGIYSSLI 580



 Score =  188 bits (477), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 129/494 (26%), Positives = 237/494 (47%), Gaps = 27/494 (5%)

Query: 70  QPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPD------FLTLNILINCFGNK 123
           +PS      ++LF     NR +D+ +  +      G   D      FL   + +   GN 
Sbjct: 113 EPSIVEKFCDMLFRVYMDNRMFDSSLEVFDYARKKGFEIDERSCFEFL---LALKRSGNM 169

Query: 124 ERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDY 183
           E  LCVE          + M+  G+   V ++  +++G C+ G +  A  L  ++V   +
Sbjct: 170 E--LCVE--------FLRQMVDSGIEIRVCSWTAVVDGLCKKGEVVRAKALMDELVCKGF 219

Query: 184 ENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGN 243
                 K ++ +Y+ +++   +   V    E+   M+   ++  V   T LI  +  +  
Sbjct: 220 ------KPSVITYNTLLNGYIEIKDVGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSK 273

Query: 244 WEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNS 303
            EE   LF EML  G  P++  +  +I+  CK G +  A  L + M +R L P+ +TY +
Sbjct: 274 IEEAEKLFDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGA 333

Query: 304 LMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNG 363
           L++G C  G +  A  +   M SKG     V +N L++GYCK   ++EA+ L   +   G
Sbjct: 334 LINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQKG 393

Query: 364 VRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAV 423
                 T N + SG  ++ +   A++L   M+   V P++ +++ILID  CK     EA 
Sbjct: 394 FEIDAFTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEAR 453

Query: 424 KLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGL 483
           +LF ++E       +  +N  I+  CK G+++ A++L +++ ++GL+P   TY+ +I G 
Sbjct: 454 RLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSLIDGE 513

Query: 484 CRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVP 543
              G +++A +    M + G   NVVT+  ++ G  ++ +  +  +L  +M   +  +VP
Sbjct: 514 RASGNVDRALELFNEMPQLGLNRNVVTYTVIISGLSKDGRADEAFKLYDEMN--KEGIVP 571

Query: 544 DDTTFSIVVDLLAK 557
           DD  +S ++  L K
Sbjct: 572 DDGIYSSLIASLHK 585



 Score =  131 bits (330), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 81/298 (27%), Positives = 148/298 (49%), Gaps = 2/298 (0%)

Query: 272 CLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKH 331
            L + G +      L  M+  G+     ++ +++DG C  G +  A+ +   +  KG K 
Sbjct: 162 ALKRSGNMELCVEFLRQMVDSGIEIRVCSWTAVVDGLCKKGEVVRAKALMDELVCKGFKP 221

Query: 332 TVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLF 391
           +V++YN L+NGY +I +V     +   +  N V   V TY  L+    ++ +   A+KLF
Sbjct: 222 SVITYNTLLNGYIEIKDVGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKLF 281

Query: 392 DEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKA 451
           DEM    +EPD+  Y  +I+  CK   ++ A  LF  +   +       +  LI+G CKA
Sbjct: 282 DEMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALINGACKA 341

Query: 452 GRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTF 511
           G +  A  + + +  KG+    V ++ ++ G C+KG +++A      M++ G   +  T 
Sbjct: 342 GEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQKGFEIDAFTC 401

Query: 512 NTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSK 569
           N +  GF ++N+  +   LL  M E  R + P+  +FSI++D+  K++ + E   + K
Sbjct: 402 NIIASGFCRSNRREEAKRLLLTMEE--RGVAPNVVSFSILIDIYCKEQNFAEARRLFK 457



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 74/235 (31%), Positives = 113/235 (48%), Gaps = 13/235 (5%)

Query: 78  FNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEAT 137
           FN L     K    D  +     +   G   D  T NI+ +       G C  NR +EA 
Sbjct: 366 FNTLMDGYCKKGMIDEALRLQNIMQQKGFEIDAFTCNIIAS-------GFCRSNRREEAK 418

Query: 138 WLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYS 197
            L   M   GV P+V+++  LI+ +C+  N + A RL K M             ++ +Y+
Sbjct: 419 RLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKKG------KAPSVVTYN 472

Query: 198 IIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDL 257
             I+  CK+G +++A +L  EM+ RG+ P     T+LI G   +GN +    LF EM  L
Sbjct: 473 AFIERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSLIDGERASGNVDRALELFNEMPQL 532

Query: 258 GPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
           G   N++T+ V+I  L K G+ +EA  L + M + G+ PD   Y+SL+     VG
Sbjct: 533 GLNRNVVTYTVIISGLSKDGRADEAFKLYDEMNKEGIVPDDGIYSSLIASLHKVG 587



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 51/185 (27%), Positives = 85/185 (45%), Gaps = 13/185 (7%)

Query: 58  EARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILI 117
           EA+     M     +P + SF++L     K +++      ++ +   G  P  +T N  I
Sbjct: 416 EAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFI 475

Query: 118 NCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKK 177
             +       C + +++EA  L   M   G+ PD  TY +LI+G   +GN+  AL L  +
Sbjct: 476 ERY-------CKKGKMEEAYKLINEMQERGLMPDTYTYTSLIDGERASGNVDRALELFNE 528

Query: 178 MVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHG 237
           M        L    N+ +Y++II  L K+G  D+A +L+ EM   GI P   + ++LI  
Sbjct: 529 MPQ------LGLNRNVVTYTVIISGLSKDGRADEAFKLYDEMNKEGIVPDDGIYSSLIAS 582

Query: 238 FCCAG 242
               G
Sbjct: 583 LHKVG 587



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 41/153 (26%), Positives = 65/153 (42%), Gaps = 13/153 (8%)

Query: 55  NLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLN 114
           N  EAR  F  M     +P + ++N       K    +       ++   GL+PD  T  
Sbjct: 448 NFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQERGLMPDTYTYT 507

Query: 115 ILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRL 174
            LI+  G +  G      +  A  LF  M   G+  +V+TY  +I+G  + G    A +L
Sbjct: 508 SLID--GERASG-----NVDRALELFNEMPQLGLNRNVVTYTVIISGLSKDGRADEAFKL 560

Query: 175 HKKMVSGDYENGLISKTNIFSYSIIIDSLCKEG 207
           + +M     + G++    I  YS +I SL K G
Sbjct: 561 YDEM----NKEGIVPDDGI--YSSLIASLHKVG 587


>gi|449502431|ref|XP_004161638.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Cucumis sativus]
          Length = 646

 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 142/531 (26%), Positives = 256/531 (48%), Gaps = 38/531 (7%)

Query: 58  EARYFFGYMTH-MQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLV---SIGLLPDFLTL 113
           EA  FF  M + +     + SFN +   + +   +     FY  +    S G  P+ LT 
Sbjct: 118 EAVNFFHRMANDLHCKQTVKSFNSVLNVIIQEGDFSYAFKFYLHVFGANSKGFQPNLLTY 177

Query: 114 NILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALR 173
           N++I       + LC   +I  A   F+ M      PDV TY TL+NG C+   +  A+ 
Sbjct: 178 NLII-------KALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVF 230

Query: 174 LHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTT 233
           L  +M +     G +   N  +++++ID+L K G + +A +L   M  +G  P  V   T
Sbjct: 231 LLDEMQA----EGCLP--NPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNT 284

Query: 234 LIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRG 293
           LIHG C  G  ++   L  +M+     PN +T+  +I+ L K  +  +   +L  M +RG
Sbjct: 285 LIHGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERG 344

Query: 294 LNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAM 353
              + + Y+SL+ G    G+ + A  ++  M  KGCK  VV Y   I+G C+    +EA 
Sbjct: 345 QKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAE 404

Query: 354 SLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGL 413
            + ++++S G      TY++L+ G F+ G +  A  ++ EM   ++  ++   ++L++GL
Sbjct: 405 DILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGL 464

Query: 414 CKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLP--QKGLVP 471
           C++  ++EA+ ++  +     +  +  ++ +I GLC  G +D   +LF+++   +    P
Sbjct: 465 CESGRLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRP 524

Query: 472 TVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSK----- 526
            VVTY+I+ + LCR+  L +A D L  M   GC P+ +T N  +    +     +     
Sbjct: 525 DVVTYNILFNALCRQDNLTRAIDLLNSMLDEGCDPDSLTCNIFLETLRERINPPQDGRLF 584

Query: 527 VVELLHKMAEPERNLV--------------PDDTTFSIVVDLLAKDEKYHE 563
           + EL+ ++ + ER L               P+ +T+S V+    K ++  E
Sbjct: 585 LDELVVRLLKRERKLSALRIVEEMLLRFLPPEPSTWSRVIQRTCKPKRIRE 635



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 132/506 (26%), Positives = 225/506 (44%), Gaps = 77/506 (15%)

Query: 53  IINLNEARYFFGYMTHMQPS------PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGL 106
           II   +  Y F +  H+  +      P + ++NL+  A+ K    D  +  +R++     
Sbjct: 146 IIQEGDFSYAFKFYLHVFGANSKGFQPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNC 205

Query: 107 LPDFLTLNILINCFGNKERGLCVENRIKEATWLF-------------------------- 140
            PD  T + L+N       GLC E R+ EA +L                           
Sbjct: 206 NPDVFTYSTLMN-------GLCKERRVDEAVFLLDEMQAEGCLPNPVTFNVLIDALSKNG 258

Query: 141 ---------KNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKT 191
                     NM   G  P+ +TY TLI+G C  G L  AL L +KMVS           
Sbjct: 259 DLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMVSSK------CVP 312

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
           N  +Y  II+ L K+   +    + + M+ RG      + ++LI G    G  E    L+
Sbjct: 313 NQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSENAVRLW 372

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
            EM + G +PN++ +   ID LC+  K +EA  +L+ M+ +G  P+ FTY+SLM G+   
Sbjct: 373 KEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKK 432

Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
           G    A  ++  M S+  +H VV  ++L+NG C+   + EA++++  ++  G++  V+ Y
Sbjct: 433 GDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREALTVWTHMLGEGLKPDVVAY 492

Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVE--PDLSTYNILIDGLCKNNCVQEAVKLFHML 429
           ++++ GL   G      KLF EM+    +  PD+ TYNIL + LC+ + +  A+ L + +
Sbjct: 493 SSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDVVTYNILFNALCRQDNLTRAIDLLNSM 552

Query: 430 ---------------------EMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKG 468
                                 +N  + G    + L+  L K  R  +A  +  ++  + 
Sbjct: 553 LDEGCDPDSLTCNIFLETLRERINPPQDGRLFLDELVVRLLKRERKLSALRIVEEMLLRF 612

Query: 469 LVPTVVTYSIMIHGLCRKGKLEKAND 494
           L P   T+S +I   C+  ++ +  D
Sbjct: 613 LPPEPSTWSRVIQRTCKPKRIRETID 638



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 84/290 (28%), Positives = 142/290 (48%), Gaps = 5/290 (1%)

Query: 300 TYNSLMDGYCLVGRIDTAREIFLSM---HSKGCKHTVVSYNILINGYCKILNVEEAMSLY 356
           ++NS+++     G    A + +L +   +SKG +  +++YN++I   CK+  ++ A+  +
Sbjct: 138 SFNSVLNVIIQEGDFSYAFKFYLHVFGANSKGFQPNLLTYNLIIKALCKLGQIDRAVDTF 197

Query: 357 RQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKN 416
           R++        V TY+TL++GL +  +   A  L DEM+     P+  T+N+LID L KN
Sbjct: 198 REMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEGCLPNPVTFNVLIDALSKN 257

Query: 417 NCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTY 476
             +  A KL   + +         +N LI GLC  G+LD A  L  K+     VP  VTY
Sbjct: 258 GDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMVSSKCVPNQVTY 317

Query: 477 SIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAE 536
             +I+GL ++ + E     L+ ME+ G   N   +++L+ G  +  K+   V L  +MAE
Sbjct: 318 GTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAE 377

Query: 537 PERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKSSYRACLYVTIFQPSSL 586
             +   P+   +   +D L +DEK  E   + +           F  SSL
Sbjct: 378 --KGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSL 425


>gi|302799687|ref|XP_002981602.1| hypothetical protein SELMODRAFT_114819 [Selaginella moellendorffii]
 gi|300150768|gb|EFJ17417.1| hypothetical protein SELMODRAFT_114819 [Selaginella moellendorffii]
          Length = 628

 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 141/512 (27%), Positives = 243/512 (47%), Gaps = 45/512 (8%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL-VSIGLL 107
           CK+G   L++A+   G +        + +++++     K    D  +  ++ +    G +
Sbjct: 84  CKAG--ELDKAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSAGGGCV 141

Query: 108 PDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGN 167
           PD +T N L+       +GLC   R+ EA  LF+ M   G  P+VI+Y TL++G C+ G 
Sbjct: 142 PDVVTFNSLL-------KGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGR 194

Query: 168 LSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPA 227
           L  A RL ++MV    E   +   ++ +Y+  +  LCK   V +A +   +M  +G    
Sbjct: 195 LDEACRLWEEMV----EKSCVP--DLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKAD 248

Query: 228 VVVCTTLIHGFCCAGNWEEVNGLFIE------MLDLGPR-----------PNLLTFNVMI 270
            V  +T+I   C  G+ EE     IE      MLD   +           P+   FN +I
Sbjct: 249 AVAFSTVIGILCKKGHAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLI 308

Query: 271 DCLCKGGKINEANGLLELMIQRGLN-----PDRFTYNSLMDGYCLVGRIDTAREIFLSMH 325
             +CK  ++   +G+L     + +      P+  TYN ++D  C   ++D A+E+   M 
Sbjct: 309 HAVCKSKRL--PDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMA 366

Query: 326 SKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAG 385
           + G    VV+Y+ L++G CK+  ++ A  L  ++   GV     T  ++L+ L +AG+  
Sbjct: 367 NYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVD 426

Query: 386 YAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLI 445
           YA    + MK     PDL TYN L+DGLCK   + EA+     +   K    +  +  +I
Sbjct: 427 YALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIII 486

Query: 446 DGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNG-C 504
             LC++G+   A  +F ++ ++G++P  V Y  ++ GL R G LE   D  L + K   C
Sbjct: 487 TALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLARNG-LE---DLALELLKTSLC 542

Query: 505 APNVVTFNTLMHGFLQNNKTSKVVELLHKMAE 536
            P+ V    ++ G  +  K     E++ +MA+
Sbjct: 543 KPDFVMHKMVVDGLCKAGKAEDACEVVERMAD 574



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 147/544 (27%), Positives = 237/544 (43%), Gaps = 63/544 (11%)

Query: 77  SFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEA 136
           ++N    A+AK          ++++   G  PD  T +I++       RGLC    + +A
Sbjct: 40  TYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFTYSIVL-------RGLCKAGELDKA 92

Query: 137 TWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSG--------------- 181
             L   +   GV+ +VITY  +I+G C+   +  AL + K M +G               
Sbjct: 93  KELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSAGGGCVPDVVTFNSLLK 152

Query: 182 ---------------DYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINP 226
                          +Y      + N+ SYS ++D LCK G +D+A  L+ EM  +   P
Sbjct: 153 GLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEKSCVP 212

Query: 227 AVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTF-----------------NVM 269
            +V  T+ + G C A    E      +M+  G + + + F                 N M
Sbjct: 213 DLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKKGHAEEAQNQM 272

Query: 270 IDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKG- 328
           I+ LC+ G ++EA    E MI R   P    +N+L+   C   R+     +F  M S   
Sbjct: 273 IEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKE 332

Query: 329 --CKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGY 386
             C   + +YNI+++  CK   ++EA  L  ++ + G+   V+TY+ L+ GL + G+   
Sbjct: 333 FYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDR 392

Query: 387 AQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLID 446
           A  L +EM    V PD  T   +++ L K   V  A+     ++       +  +N L+D
Sbjct: 393 ACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTPDLVTYNTLLD 452

Query: 447 GLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAP 506
           GLCKAGR+D A     K+      P V +Y+I+I  LCR G+   A+     M K G  P
Sbjct: 453 GLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRGVLP 512

Query: 507 NVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE-CS 565
           + V +++L+ G  +N      +ELL           PD     +VVD L K  K  + C 
Sbjct: 513 DTVLYHSLLDGLARNGLEDLALELLKTSL-----CKPDFVMHKMVVDGLCKAGKAEDACE 567

Query: 566 AVSK 569
            V +
Sbjct: 568 VVER 571



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 124/429 (28%), Positives = 205/429 (47%), Gaps = 60/429 (13%)

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
           ++F+Y+  +D+L K      A E F +M+ RG  P     + ++ G C AG  ++   L 
Sbjct: 37  SVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFTYSIVLRGLCKAGELDKAKELL 96

Query: 252 IEMLDLGPRPNLLTFNVMID-C-----------------------------------LCK 275
            ++ + G + N++T++V+ID C                                   LC 
Sbjct: 97  GQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSAGGGCVPDVVTFNSLLKGLCS 156

Query: 276 GGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVS 335
           G +++EA  L E M + G  P+  +Y++L+DG C  GR+D A  ++  M  K C   +V+
Sbjct: 157 GERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEKSCVPDLVA 216

Query: 336 YNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQ------- 388
           Y   + G CK   V EA    R++++ G +   + ++T++  L + G A  AQ       
Sbjct: 217 YTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKKGHAEEAQNQMIEHL 276

Query: 389 ----------KLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEF-- 436
                     K F+EM   N  P    +N LI  +CK+  + + V LF  ++  K EF  
Sbjct: 277 CRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMK-EFYC 335

Query: 437 --GIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKAND 494
              +E +N ++D LCKA +LD A EL +++   GL P VVTYS ++ GLC+ GKL++A D
Sbjct: 336 PPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACD 395

Query: 495 FLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDL 554
            L  M K G  P+  T  ++++   +  K    +  L  M    R   PD  T++ ++D 
Sbjct: 396 LLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETM--KARGSTPDLVTYNTLLDG 453

Query: 555 LAKDEKYHE 563
           L K  +  E
Sbjct: 454 LCKAGRIDE 462



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 122/455 (26%), Positives = 202/455 (44%), Gaps = 59/455 (12%)

Query: 55  NLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLN 114
            ++EA   F YM      P + S++ L   + K    D     + ++V    +PD +   
Sbjct: 159 RMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEKSCVPDLVAYT 218

Query: 115 ILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGT----------------- 157
             +        GLC  NR+ EA    + M+  G + D + + T                 
Sbjct: 219 SFVT-------GLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKKGHAEEAQNQ 271

Query: 158 LINGFCRTGNLSVALRLHKKMVSGDYE------NGLISKT-------------------- 191
           +I   CR+G L  A +  ++M+S ++       N LI                       
Sbjct: 272 MIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMK 331

Query: 192 ------NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWE 245
                 N+ +Y+I++D+LCK   +D+A+EL  EM   G++P VV  + L+ G C  G  +
Sbjct: 332 EFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLD 391

Query: 246 EVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLM 305
               L  EM   G  P+  T   +++ L K GK++ A   LE M  RG  PD  TYN+L+
Sbjct: 392 RACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTPDLVTYNTLL 451

Query: 306 DGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVR 365
           DG C  GRID A      M +  C   V SY I+I   C+      A +++++++  GV 
Sbjct: 452 DGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRGVL 511

Query: 366 QTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKL 425
              + Y++LL GL + G    A +L   +K    +PD   + +++DGLCK    ++A ++
Sbjct: 512 PDTVLYHSLLDGLARNGLEDLALEL---LKTSLCKPDFVMHKMVVDGLCKAGKAEDACEV 568

Query: 426 FHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWEL 460
              +    F      +  ++ GL K G++D A +L
Sbjct: 569 VERMADAGFPADAFTYINVVRGLRKLGKVDKARQL 603



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 102/359 (28%), Positives = 177/359 (49%), Gaps = 21/359 (5%)

Query: 38  ETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISF 97
           E   N+ +   C+SG+  L+EA   F  M      P    FN L  AV K++     +  
Sbjct: 266 EEAQNQMIEHLCRSGM--LDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLL 323

Query: 98  YRKLVSIGLL---PDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVIT 154
           ++++ S+      P+  T NI+++        LC   ++ EA  L   M  +G+ PDV+T
Sbjct: 324 FQRMKSMKEFYCPPNLETYNIMVD-------NLCKAKQLDEAQELVNEMANYGLSPDVVT 376

Query: 155 YGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKE 214
           Y  L++G C+ G L  A  L ++M     + G+   +  F+ + I+++L K G VD A  
Sbjct: 377 YSALVDGLCKLGKLDRACDLLEEM----SKEGVFPDS--FTDASILNALSKAGKVDYALS 430

Query: 215 LFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLC 274
               MK RG  P +V   TL+ G C AG  +E      +M+     P++ ++ ++I  LC
Sbjct: 431 HLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALC 490

Query: 275 KGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVV 334
           + G+   A+ + + M++RG+ PD   Y+SL+DG    G  D A E+   + +  CK   V
Sbjct: 491 RSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLARNGLEDLALEL---LKTSLCKPDFV 547

Query: 335 SYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDE 393
            + ++++G CK    E+A  +  ++   G      TY  ++ GL + G+   A++L D+
Sbjct: 548 MHKMVVDGLCKAGKAEDACEVVERMADAGFPADAFTYINVVRGLRKLGKVDKARQLVDD 606



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 93/325 (28%), Positives = 163/325 (50%), Gaps = 19/325 (5%)

Query: 258 GPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTA 317
           G + ++ T+N  +D L K      A    + M +RG  PD FTY+ ++ G C  G +D A
Sbjct: 33  GYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFTYSIVLRGLCKAGELDKA 92

Query: 318 REIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIIS-NGVRQTVITYNTLLS 376
           +E+   +   G K  V++Y+++I+G CK   V++A+ +++ + +  G    V+T+N+LL 
Sbjct: 93  KELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSAGGGCVPDVVTFNSLLK 152

Query: 377 GLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEF 436
           GL    +   A  LF+ M     EP++ +Y+ L+DGLCK   + EA +L+  +       
Sbjct: 153 GLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEKSCVP 212

Query: 437 GIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKA-NDF 495
            +  +   + GLCKA R+  A +   K+  KG     V +S +I  LC+KG  E+A N  
Sbjct: 213 DLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKKGHAEEAQNQM 272

Query: 496 LLYMEKNGC----------------APNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPER 539
           + ++ ++G                  P+   FNTL+H   ++ +    V L  +M   + 
Sbjct: 273 IEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKE 332

Query: 540 NLVPDD-TTFSIVVDLLAKDEKYHE 563
              P +  T++I+VD L K ++  E
Sbjct: 333 FYCPPNLETYNIMVDNLCKAKQLDE 357



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 77/241 (31%), Positives = 123/241 (51%), Gaps = 2/241 (0%)

Query: 277 GKINEANGLLE-LMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVS 335
           GKI+    L + L  Q+G     FTYN  +D          A E F  M  +G      +
Sbjct: 16  GKISTIVRLFDWLGRQKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFT 75

Query: 336 YNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMK 395
           Y+I++ G CK   +++A  L  Q+  +GV+  VITY+ ++ G  +A +   A ++F  M 
Sbjct: 76  YSIVLRGLCKAGELDKAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMS 135

Query: 396 L-YNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRL 454
                 PD+ T+N L+ GLC    + EA  LF  +     E  +  ++ L+DGLCKAGRL
Sbjct: 136 AGGGCVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRL 195

Query: 455 DNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTL 514
           D A  L+ ++ +K  VP +V Y+  + GLC+  ++ +A D    M   G   + V F+T+
Sbjct: 196 DEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTV 255

Query: 515 M 515
           +
Sbjct: 256 I 256



 Score =  122 bits (306), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 70/255 (27%), Positives = 132/255 (51%), Gaps = 4/255 (1%)

Query: 311 VGRIDTAREIFLSM-HSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVI 369
           +G+I T   +F  +   KG +H+V +YN  ++   K    + A   ++Q+   G      
Sbjct: 15  LGKISTIVRLFDWLGRQKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDF 74

Query: 370 TYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHML 429
           TY+ +L GL +AG+   A++L  +++   V+ ++ TY+++IDG CK + V +A+++F  +
Sbjct: 75  TYSIVLRGLCKAGELDKAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTM 134

Query: 430 EMNKFEF-GIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGK 488
                    +  FN L+ GLC   R+  A+ LF  + + G  P V++YS ++ GLC+ G+
Sbjct: 135 SAGGGCVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGR 194

Query: 489 LEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTF 548
           L++A      M +  C P++V + + + G  + N+ ++  +   KM    +    D   F
Sbjct: 195 LDEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMV--TKGSKADAVAF 252

Query: 549 SIVVDLLAKDEKYHE 563
           S V+ +L K     E
Sbjct: 253 STVIGILCKKGHAEE 267


>gi|297850744|ref|XP_002893253.1| hypothetical protein ARALYDRAFT_313173 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297339095|gb|EFH69512.1| hypothetical protein ARALYDRAFT_313173 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1147

 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 137/505 (27%), Positives = 242/505 (47%), Gaps = 34/505 (6%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILIN-CF--GNKERGLCV 129
           P + + N++   +  +R  +     Y  +V  G++P  +T N +++ CF  G+ ER    
Sbjct: 237 PSVRNCNIVLRVLRDSRMMNKAQEVYETMVMHGIMPTVITFNTMLDSCFKAGDLER---- 292

Query: 130 ENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLIS 189
                +  WL   M    +    +TY  LINGF ++G +  A R H  M    +      
Sbjct: 293 ----VDKIWL--EMKRRNIEFSEVTYNILINGFSKSGKMEEARRFHGDMQRSGF------ 340

Query: 190 KTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNG 249
               +S++ +I+  CK+GL D+A  +  EM   GI P        I   C  G  ++   
Sbjct: 341 PVTPYSFNPLIEGYCKQGLFDEAWGVTDEMLNAGIYPTTSTYNIYIRALCEFGRIDDARE 400

Query: 250 LFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYC 309
           L   M      P+++++N ++    K  K  EA+ L + +    +NP   TYN+L+DG C
Sbjct: 401 LLSSM----AAPDVVSYNTLMHGYIKMRKFVEASLLFDDLKAGNINPSIVTYNTLIDGLC 456

Query: 310 LVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVI 369
             G ++ A+ +   M S+     V++Y  L+ G+ K  N+  A  +Y +++  G++    
Sbjct: 457 ESGNLEGAQRLKEEMTSQLIYPDVITYTTLLKGFVKNGNLSMATEIYDEMLRKGIKPDGY 516

Query: 370 TYNTLLSGLFQAGQAGYAQKLFDEMKLYNVE-PDLSTYNILIDGLCKNNCVQEAVKLFHM 428
            Y T   G  + G +  A +L +EM   +   PDL+ YN+ IDGLCK   +++A++    
Sbjct: 517 AYTTRTVGELRLGDSEKAFRLHEEMVAEDHHAPDLTIYNVRIDGLCKVGNLEKAIE---- 572

Query: 429 LEMNKFEFGI----EIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLC 484
            +   F  G+      +  +I G  + GR   A +L+ ++  K L P+V+TY ++IHG  
Sbjct: 573 FQRKIFRVGLVPDHVTYTTVIRGYLEKGRFKMARDLYDEMLSKRLSPSVITYFVLIHGHA 632

Query: 485 RKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPD 544
           + G+LE+A  +   M+K G  PNV+T N L+HG  +     +    L KM   E  + P+
Sbjct: 633 KAGRLEQAFQYSTEMKKRGVRPNVMTHNALLHGMCKAGNIDEAYRYLCKME--EEGISPN 690

Query: 545 DTTFSIVVDLLAKDEKYHECSAVSK 569
             +++I++      +K+ E   + K
Sbjct: 691 KYSYTILISKHCDLDKWEEVVKLYK 715



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 119/410 (29%), Positives = 199/410 (48%), Gaps = 20/410 (4%)

Query: 18  KVKLSSLFKSPRQIAAVSSPETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISS 77
           K++ +  F    Q +         N  +   CK G+   +EA      M +    P  S+
Sbjct: 324 KMEEARRFHGDMQRSGFPVTPYSFNPLIEGYCKQGL--FDEAWGVTDEMLNAGIYPTTST 381

Query: 78  FNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEAT 137
           +N+   A+ +    D      R+L+S    PD ++ N L++       G     +  EA+
Sbjct: 382 YNIYIRALCEFGRIDDA----RELLSSMAAPDVVSYNTLMH-------GYIKMRKFVEAS 430

Query: 138 WLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYS 197
            LF ++ A  + P ++TY TLI+G C +GNL  A RL ++M S       +   ++ +Y+
Sbjct: 431 LLFDDLKAGNINPSIVTYNTLIDGLCESGNLEGAQRLKEEMTSQ------LIYPDVITYT 484

Query: 198 IIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEML-D 256
            ++    K G +  A E++ EM  +GI P     TT   G    G+ E+   L  EM+ +
Sbjct: 485 TLLKGFVKNGNLSMATEIYDEMLRKGIKPDGYAYTTRTVGELRLGDSEKAFRLHEEMVAE 544

Query: 257 LGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDT 316
               P+L  +NV ID LCK G + +A      + + GL PD  TY +++ GY   GR   
Sbjct: 545 DHHAPDLTIYNVRIDGLCKVGNLEKAIEFQRKIFRVGLVPDHVTYTTVIRGYLEKGRFKM 604

Query: 317 AREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLS 376
           AR+++  M SK    +V++Y +LI+G+ K   +E+A     ++   GVR  V+T+N LL 
Sbjct: 605 ARDLYDEMLSKRLSPSVITYFVLIHGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLH 664

Query: 377 GLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLF 426
           G+ +AG    A +   +M+   + P+  +Y ILI   C  +  +E VKL+
Sbjct: 665 GMCKAGNIDEAYRYLCKMEEEGISPNKYSYTILISKHCDLDKWEEVVKLY 714



 Score =  151 bits (382), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 99/353 (28%), Positives = 168/353 (47%), Gaps = 5/353 (1%)

Query: 205 KEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLL 264
           K+ + +K    F +M  +G  P+V  C  ++     +    +   ++  M+  G  P ++
Sbjct: 216 KKSMAEKCLLSFEKMIRKGFLPSVRNCNIVLRVLRDSRMMNKAQEVYETMVMHGIMPTVI 275

Query: 265 TFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSM 324
           TFN M+D   K G +   + +   M +R +     TYN L++G+   G+++ AR     M
Sbjct: 276 TFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKSGKMEEARRFHGDM 335

Query: 325 HSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQA 384
              G   T  S+N LI GYCK    +EA  +  ++++ G+  T  TYN  +  L + G+ 
Sbjct: 336 QRSGFPVTPYSFNPLIEGYCKQGLFDEAWGVTDEMLNAGIYPTTSTYNIYIRALCEFGRI 395

Query: 385 GYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCL 444
             A++L   M      PD+ +YN L+ G  K     EA  LF  L+       I  +N L
Sbjct: 396 DDARELLSSM----AAPDVVSYNTLMHGYIKMRKFVEASLLFDDLKAGNINPSIVTYNTL 451

Query: 445 IDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGC 504
           IDGLC++G L+ A  L  ++  + + P V+TY+ ++ G  + G L  A +    M + G 
Sbjct: 452 IDGLCESGNLEGAQRLKEEMTSQLIYPDVITYTTLLKGFVKNGNLSMATEIYDEMLRKGI 511

Query: 505 APNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAK 557
            P+   + T   G L+   + K   L  +M   E +  PD T +++ +D L K
Sbjct: 512 KPDGYAYTTRTVGELRLGDSEKAFRLHEEMV-AEDHHAPDLTIYNVRIDGLCK 563



 Score =  142 bits (357), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 104/382 (27%), Positives = 171/382 (44%), Gaps = 53/382 (13%)

Query: 32  AAVSSPETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHY 91
           A +    +  N ++   C+ G I+  +AR     M     +P + S+N L     K R +
Sbjct: 373 AGIYPTTSTYNIYIRALCEFGRID--DARELLSSMA----APDVVSYNTLMHGYIKMRKF 426

Query: 92  DAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPD 151
                 +  L +  + P  +T N LI+       GLC    ++ A  L + M +  + PD
Sbjct: 427 VEASLLFDDLKAGNINPSIVTYNTLID-------GLCESGNLEGAQRLKEEMTSQLIYPD 479

Query: 152 VITYGTLINGFCRTGNLSVA-----------------------------------LRLHK 176
           VITY TL+ GF + GNLS+A                                    RLH+
Sbjct: 480 VITYTTLLKGFVKNGNLSMATEIYDEMLRKGIKPDGYAYTTRTVGELRLGDSEKAFRLHE 539

Query: 177 KMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIH 236
           +MV+ D+        ++  Y++ ID LCK G ++KA E   ++   G+ P  V  TT+I 
Sbjct: 540 EMVAEDHH-----APDLTIYNVRIDGLCKVGNLEKAIEFQRKIFRVGLVPDHVTYTTVIR 594

Query: 237 GFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNP 296
           G+   G ++    L+ EML     P+++T+ V+I    K G++ +A      M +RG+ P
Sbjct: 595 GYLEKGRFKMARDLYDEMLSKRLSPSVITYFVLIHGHAKAGRLEQAFQYSTEMKKRGVRP 654

Query: 297 DRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLY 356
           +  T+N+L+ G C  G ID A      M  +G      SY ILI+ +C +   EE + LY
Sbjct: 655 NVMTHNALLHGMCKAGNIDEAYRYLCKMEEEGISPNKYSYTILISKHCDLDKWEEVVKLY 714

Query: 357 RQIISNGVRQTVITYNTLLSGL 378
           ++++   +     T+  L   L
Sbjct: 715 KEMLDKEIEPDGYTHRALFKHL 736


>gi|297744958|emb|CBI38550.3| unnamed protein product [Vitis vinifera]
          Length = 795

 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 129/446 (28%), Positives = 223/446 (50%), Gaps = 16/446 (3%)

Query: 113 LNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVAL 172
            N+LI+       G C    I  A  L + M   G  PD++TY TL+NGFC+ G+L  A 
Sbjct: 20  FNVLID-------GYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAK 72

Query: 173 RLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCT 232
           +L  ++   + E       N+ +Y+ +ID+ CK   ++ A  ++ EM  + + P VV  T
Sbjct: 73  KLMGEISLVNLE------PNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYT 126

Query: 233 TLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQR 292
            +++G C +G  EE   +F EM ++G  PN  ++  +ID L K G + EA  L   M+ R
Sbjct: 127 CIMNGLCKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVR 186

Query: 293 GLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEA 352
           G+  D   Y +LMDG    G  + A ++F  +  +      V+Y+ LI+G+CK+ +V + 
Sbjct: 187 GIGFDVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKG 246

Query: 353 MSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDG 412
             L +++    +   VI Y++++ G  + G    A  +  +M   N+ P++  Y  LIDG
Sbjct: 247 ELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDG 306

Query: 413 LCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPT 472
             K +    A+ LF  ++    E    + +  ++ L ++GR++ A ELF  +  +GL+P 
Sbjct: 307 YFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPD 366

Query: 473 VVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLH 532
            V Y+ M+ G  + GK   A +    M +     +VV +N L++G  +  K     E  H
Sbjct: 367 RVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYES--ESFH 424

Query: 533 KMAEPERNLVPDDTTFSIVVDLLAKD 558
                +  L PD  TF+ +++   K+
Sbjct: 425 T-GMRQLGLAPDSATFNTMINAYCKE 449



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 134/488 (27%), Positives = 242/488 (49%), Gaps = 16/488 (3%)

Query: 68  HMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGL 127
           H +    +  FN+L     +N      +     + + G  PD +T N L+N       G 
Sbjct: 10  HPEIRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMN-------GF 62

Query: 128 CVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGL 187
           C    +  A  L   +    + P+VITY TLI+ +C++  L  AL ++ +M        L
Sbjct: 63  CKIGDLFTAKKLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTV----KSL 118

Query: 188 ISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEV 247
           +   ++ +Y+ I++ LCK G V++AK +F EM+  G+ P      TLI      GN  E 
Sbjct: 119 VP--DVVTYTCIMNGLCKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEA 176

Query: 248 NGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDG 307
             L   M+  G   +++ +  ++D L K G  N A  + +++++  L P+  TY++L+DG
Sbjct: 177 FVLQGRMVVRGIGFDVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDG 236

Query: 308 YCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQT 367
           +C +G ++    +   M  K     V+ Y+ +++GY K   + EAM + R+++   +   
Sbjct: 237 HCKLGDVNKGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPN 296

Query: 368 VITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFH 427
           V  Y TL+ G F+A Q G A  LF EMK   +E +    +  ++ L ++  ++EA +LF 
Sbjct: 297 VFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFK 356

Query: 428 MLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKG 487
            +           +  ++DG  KAG+  +A+ +  ++ +K     VV Y+++I+GL + G
Sbjct: 357 DMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLG 416

Query: 488 KLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTT 547
           K E +  F   M + G AP+  TFNT+++ + +       ++LL++M      L P+  T
Sbjct: 417 KYE-SESFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEM--KSYGLKPNSIT 473

Query: 548 FSIVVDLL 555
            +I+V  L
Sbjct: 474 CNILVQRL 481



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 131/532 (24%), Positives = 248/532 (46%), Gaps = 32/532 (6%)

Query: 56  LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNI 115
           LNEA      M      P +  +  L     K       +  ++++ S GL  +    N 
Sbjct: 278 LNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEEN----NF 333

Query: 116 LINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLH 175
           +I+ F N    L    R++EA  LFK+M++ G+ PD + Y ++++GF + G  S A  + 
Sbjct: 334 VIDSFVN---NLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIA 390

Query: 176 KKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLI 235
           ++M          S  ++ +Y+++I+ L K G  + ++     M+  G+ P      T+I
Sbjct: 391 QEMTEKS------SGFDVVAYNVLINGLFKLGKYE-SESFHTGMRQLGLAPDSATFNTMI 443

Query: 236 HGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLN 295
           + +C  GN      L  EM   G +PN +T N+++  LC  G+I +   LL  M+  G +
Sbjct: 444 NAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFH 503

Query: 296 PDRFTYNSLMDGYCLVGRIDTAREIFLSMHSK----GCKHTVVSYNILINGYCKILNVEE 351
           P   T+ +++D      R D    + L MH +    G K  + +YN LI+ +C++  +  
Sbjct: 504 PTPTTHKAVLDASSKSRRAD----VILHMHDQLVGMGVKLDLSTYNTLISTFCRLGMIRR 559

Query: 352 AMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILID 411
           A  +++ ++  G+   +ITYN L+ G   +     A  +  +M    V P++ TYNIL+ 
Sbjct: 560 ATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLG 619

Query: 412 GLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVP 471
           GL     ++EA  L + ++          ++ L+ G  K G +    +L+ ++  KG VP
Sbjct: 620 GLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITKGFVP 679

Query: 472 TVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELL 531
              TY+++I    +  K+ +A + +  M+  G  PN  T++ L+ G+ + +K  ++ + L
Sbjct: 680 KTRTYNVLISCFAKGKKMSQAKELMQEMQVRGIPPNSSTYDILICGWYKLSKQPELNKSL 739

Query: 532 HKMAEP----------ERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKSSYR 573
            +  +           E+  +P + T + +   LAK  K  +   +    Y+
Sbjct: 740 KRSYQAEAKRLFEEMNEKGFIPCENTLACISFTLAKPGKKADAQRILNKLYK 791



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 59/194 (30%), Positives = 103/194 (53%), Gaps = 2/194 (1%)

Query: 364 VRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAV 423
           +R++V  +N L+ G  + G+   A +L + MK     PD+ TYN L++G CK   +  A 
Sbjct: 13  IRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAK 72

Query: 424 KLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGL 483
           KL   + +   E  +  +  LID  CK+  L++A  ++ ++  K LVP VVTY+ +++GL
Sbjct: 73  KLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGL 132

Query: 484 CRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVP 543
           C+ GK+E+A      ME+ G  PN  ++ TL+    +    ++   L  +M    R +  
Sbjct: 133 CKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMV--VRGIGF 190

Query: 544 DDTTFSIVVDLLAK 557
           D   ++ ++D L K
Sbjct: 191 DVVVYTALMDGLFK 204


>gi|358346502|ref|XP_003637306.1| Pentatricopeptide repeat-containing protein, partial [Medicago
           truncatula]
 gi|355503241|gb|AES84444.1| Pentatricopeptide repeat-containing protein, partial [Medicago
           truncatula]
          Length = 603

 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 132/444 (29%), Positives = 221/444 (49%), Gaps = 16/444 (3%)

Query: 105 GLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCR 164
           GL+P+  TLN +I      E GL     ++ A  LF+ M   GV+PD I+Y  ++  +C+
Sbjct: 165 GLVPNTRTLNWIIKV--TSEMGL-----VEYAELLFEEMCVRGVQPDSISYRVMVVMYCK 217

Query: 165 TGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGI 224
            GN+  A     K +S   E G +     F+  +II     +G   +A   F  +   G+
Sbjct: 218 IGNILEA----DKWLSVMLERGFVVDNATFT--LIISRFSGKGYTTRALWYFRRLVDMGL 271

Query: 225 NPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANG 284
            P ++  T +I G C  G+ ++   +  EM+  G +PN+ T   +ID LCK G   +A  
Sbjct: 272 EPNLINFTCMIEGLCKRGSIKQAFEMLEEMVGKGWKPNVYTHTSLIDGLCKKGWTEKAFR 331

Query: 285 L-LELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGY 343
           L L+L+      P+  TY +++ GYC   +++ A  +   M  +G      +Y  LI+G+
Sbjct: 332 LFLKLVRSENHKPNVLTYTAMISGYCREDKLNRAEMLLSRMKEQGLVPNTNTYTTLIDGH 391

Query: 344 CKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDL 403
           CK  N E A  L   + S G    + TYN +++GL + G+   A K+ ++     ++PD 
Sbjct: 392 CKAGNFERAYDLMNLMSSEGFSPNLCTYNAIVNGLCKRGRVQEAYKMLEDGFQNGLKPDK 451

Query: 404 STYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHK 463
            TYNIL+   CK   +++A+ LF+ +     +  I  +  LI   C+  R+  +   F +
Sbjct: 452 FTYNILMSEHCKQENIRQALALFNKMLKIGIQPDIHSYTTLIAVFCRENRMKESEMFFEE 511

Query: 464 LPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNK 523
             + G++PT  TY+ MI G CR+G L  A  F   +  +GCAP+ +T+  ++ G  + +K
Sbjct: 512 AVRIGIIPTNKTYTSMICGYCREGNLTLAMKFFHRLSDHGCAPDSITYGAIISGLCKQSK 571

Query: 524 TSKVVELLHKMAEPERNLVPDDTT 547
             +   L   M   E+ LVP + T
Sbjct: 572 RDEARSLYDSMI--EKGLVPCEVT 593



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 119/378 (31%), Positives = 188/378 (49%), Gaps = 14/378 (3%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CK G  N+ EA  +   M         ++F L+    +   +    + ++R+LV +GL P
Sbjct: 216 CKIG--NILEADKWLSVMLERGFVVDNATFTLIISRFSGKGYTTRALWYFRRLVDMGLEP 273

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           + +    +I        GLC    IK+A  + + M+  G +P+V T+ +LI+G C+ G  
Sbjct: 274 NLINFTCMIE-------GLCKRGSIKQAFEMLEEMVGKGWKPNVYTHTSLIDGLCKKGWT 326

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
             A RL  K+V  +       K N+ +Y+ +I   C+E  +++A+ L   MK +G+ P  
Sbjct: 327 EKAFRLFLKLVRSENH-----KPNVLTYTAMISGYCREDKLNRAEMLLSRMKEQGLVPNT 381

Query: 229 VVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLEL 288
              TTLI G C AGN+E    L   M   G  PNL T+N +++ LCK G++ EA  +LE 
Sbjct: 382 NTYTTLIDGHCKAGNFERAYDLMNLMSSEGFSPNLCTYNAIVNGLCKRGRVQEAYKMLED 441

Query: 289 MIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILN 348
             Q GL PD+FTYN LM  +C    I  A  +F  M   G +  + SY  LI  +C+   
Sbjct: 442 GFQNGLKPDKFTYNILMSEHCKQENIRQALALFNKMLKIGIQPDIHSYTTLIAVFCRENR 501

Query: 349 VEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNI 408
           ++E+   + + +  G+  T  TY +++ G  + G    A K F  +  +   PD  TY  
Sbjct: 502 MKESEMFFEEAVRIGIIPTNKTYTSMICGYCREGNLTLAMKFFHRLSDHGCAPDSITYGA 561

Query: 409 LIDGLCKNNCVQEAVKLF 426
           +I GLCK +   EA  L+
Sbjct: 562 IISGLCKQSKRDEARSLY 579



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 107/382 (28%), Positives = 191/382 (50%), Gaps = 14/382 (3%)

Query: 105 GLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCR 164
           G + D  T  ++I+ F  K            A W F+ ++  G+ P++I +  +I G C+
Sbjct: 235 GFVVDNATFTLIISRFSGK-------GYTTRALWYFRRLVDMGLEPNLINFTCMIEGLCK 287

Query: 165 TGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEM-KGRG 223
            G++  A  + ++MV   +      K N+++++ +ID LCK+G  +KA  LFL++ +   
Sbjct: 288 RGSIKQAFEMLEEMVGKGW------KPNVYTHTSLIDGLCKKGWTEKAFRLFLKLVRSEN 341

Query: 224 INPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEAN 283
             P V+  T +I G+C          L   M + G  PN  T+  +ID  CK G    A 
Sbjct: 342 HKPNVLTYTAMISGYCREDKLNRAEMLLSRMKEQGLVPNTNTYTTLIDGHCKAGNFERAY 401

Query: 284 GLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGY 343
            L+ LM   G +P+  TYN++++G C  GR+  A ++       G K    +YNIL++ +
Sbjct: 402 DLMNLMSSEGFSPNLCTYNAIVNGLCKRGRVQEAYKMLEDGFQNGLKPDKFTYNILMSEH 461

Query: 344 CKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDL 403
           CK  N+ +A++L+ +++  G++  + +Y TL++   +  +   ++  F+E     + P  
Sbjct: 462 CKQENIRQALALFNKMLKIGIQPDIHSYTTLIAVFCRENRMKESEMFFEEAVRIGIIPTN 521

Query: 404 STYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHK 463
            TY  +I G C+   +  A+K FH L  +        +  +I GLCK  + D A  L+  
Sbjct: 522 KTYTSMICGYCREGNLTLAMKFFHRLSDHGCAPDSITYGAIISGLCKQSKRDEARSLYDS 581

Query: 464 LPQKGLVPTVVTYSIMIHGLCR 485
           + +KGLVP  VT   + +  C+
Sbjct: 582 MIEKGLVPCEVTRITLAYEYCK 603



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 93/376 (24%), Positives = 189/376 (50%), Gaps = 3/376 (0%)

Query: 199 IIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLG 258
           +++S  + G + +A E+ +EM  +G+ P       +I      G  E    LF EM   G
Sbjct: 141 MVESFSEVGRLKEAVEMVIEMHNQGLVPNTRTLNWIIKVTSEMGLVEYAELLFEEMCVRG 200

Query: 259 PRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAR 318
            +P+ +++ VM+   CK G I EA+  L +M++RG   D  T+  ++  +   G    A 
Sbjct: 201 VQPDSISYRVMVVMYCKIGNILEADKWLSVMLERGFVVDNATFTLIISRFSGKGYTTRAL 260

Query: 319 EIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGL 378
             F  +   G +  ++++  +I G CK  ++++A  +  +++  G +  V T+ +L+ GL
Sbjct: 261 WYFRRLVDMGLEPNLINFTCMIEGLCKRGSIKQAFEMLEEMVGKGWKPNVYTHTSLIDGL 320

Query: 379 FQAGQAGYAQKLFDEM-KLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFG 437
            + G    A +LF ++ +  N +P++ TY  +I G C+ + +  A  L   ++       
Sbjct: 321 CKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCREDKLNRAEMLLSRMKEQGLVPN 380

Query: 438 IEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLL 497
              +  LIDG CKAG  + A++L + +  +G  P + TY+ +++GLC++G++++A   L 
Sbjct: 381 TNTYTTLIDGHCKAGNFERAYDLMNLMSSEGFSPNLCTYNAIVNGLCKRGRVQEAYKMLE 440

Query: 498 YMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAK 557
              +NG  P+  T+N LM    +     + + L +KM +    + PD  +++ ++ +  +
Sbjct: 441 DGFQNGLKPDKFTYNILMSEHCKQENIRQALALFNKMLKI--GIQPDIHSYTTLIAVFCR 498

Query: 558 DEKYHECSAVSKSSYR 573
           + +  E     + + R
Sbjct: 499 ENRMKESEMFFEEAVR 514



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 93/349 (26%), Positives = 170/349 (48%), Gaps = 7/349 (2%)

Query: 222 RGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINE 281
           R    A  V   ++  F   G  +E   + IEM + G  PN  T N +I    + G +  
Sbjct: 129 RNSEKACEVMRCMVESFSEVGRLKEAVEMVIEMHNQGLVPNTRTLNWIIKVTSEMGLVEY 188

Query: 282 ANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILIN 341
           A  L E M  RG+ PD  +Y  ++  YC +G I  A +    M  +G      ++ ++I+
Sbjct: 189 AELLFEEMCVRGVQPDSISYRVMVVMYCKIGNILEADKWLSVMLERGFVVDNATFTLIIS 248

Query: 342 GYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEP 401
            +        A+  +R+++  G+   +I +  ++ GL + G    A ++ +EM     +P
Sbjct: 249 RFSGKGYTTRALWYFRRLVDMGLEPNLINFTCMIEGLCKRGSIKQAFEMLEEMVGKGWKP 308

Query: 402 DLSTYNILIDGLCKNNCVQEAVKLF-HMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWEL 460
           ++ T+  LIDGLCK    ++A +LF  ++     +  +  +  +I G C+  +L+ A  L
Sbjct: 309 NVYTHTSLIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCREDKLNRAEML 368

Query: 461 FHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQ 520
             ++ ++GLVP   TY+ +I G C+ G  E+A D +  M   G +PN+ T+N +++G  +
Sbjct: 369 LSRMKEQGLVPNTNTYTTLIDGHCKAGNFERAYDLMNLMSSEGFSPNLCTYNAIVNGLCK 428

Query: 521 NNKTSKVVELLHKMAEP--ERNLVPDDTTFSIVVDLLAKDEKYHECSAV 567
             +    V+  +KM E   +  L PD  T++I++    K E   +  A+
Sbjct: 429 RGR----VQEAYKMLEDGFQNGLKPDKFTYNILMSEHCKQENIRQALAL 473



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 80/297 (26%), Positives = 127/297 (42%), Gaps = 14/297 (4%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CK G       R F   +      P + ++  +     +    +       ++   GL+P
Sbjct: 321 CKKGWTE-KAFRLFLKLVRSENHKPNVLTYTAMISGYCREDKLNRAEMLLSRMKEQGLVP 379

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           +  T   LI+       G C     + A  L   M + G  P++ TY  ++NG C+ G +
Sbjct: 380 NTNTYTTLID-------GHCKAGNFERAYDLMNLMSSEGFSPNLCTYNAIVNGLCKRGRV 432

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
             A     KM+   ++NGL  K + F+Y+I++   CK+  + +A  LF +M   GI P +
Sbjct: 433 QEAY----KMLEDGFQNGL--KPDKFTYNILMSEHCKQENIRQALALFNKMLKIGIQPDI 486

Query: 229 VVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLEL 288
              TTLI  FC     +E    F E + +G  P   T+  MI   C+ G +  A      
Sbjct: 487 HSYTTLIAVFCRENRMKESEMFFEEAVRIGIIPTNKTYTSMICGYCREGNLTLAMKFFHR 546

Query: 289 MIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCK 345
           +   G  PD  TY +++ G C   + D AR ++ SM  KG     V+   L   YCK
Sbjct: 547 LSDHGCAPDSITYGAIISGLCKQSKRDEARSLYDSMIEKGLVPCEVTRITLAYEYCK 603


>gi|326531238|dbj|BAK04970.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 660

 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 133/429 (31%), Positives = 227/429 (52%), Gaps = 17/429 (3%)

Query: 77  SFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEA 136
           +++    A+ ++   + V      +   G  PD    NI I+C       LC +NR+ +A
Sbjct: 227 TYSRWISALCQSNRIELVEELLADMDRFGFSPDIWACNIYIDC-------LCKQNRLHDA 279

Query: 137 TWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSY 196
             + + M   G  PDV+TY T++   C     S A+ L ++MV    + GL  K ++ + 
Sbjct: 280 LQMVEKMRGKGTIPDVVTYTTVVGCLCNNKRFSEAVGLWEEMV----KMGL--KPDVVAC 333

Query: 197 SIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLD 256
             +I  LCK   V++A EL   M    I  +V +   LI GF  AG+ ++   +   M  
Sbjct: 334 GALIFGLCKNSKVEEAFELASRMLSLNIELSVSIYNALISGFWRAGSIDKAYTIISFMRT 393

Query: 257 LGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDT 316
            G  P ++T+N++++  C  G + +A  L+  M   G+NPDR++YN L+ G C   ++D 
Sbjct: 394 NGCEPGVVTYNILLNHYCTIGMMEKAENLITKMETSGVNPDRYSYNQLLKGLCKTHQLDK 453

Query: 317 AREIFLSMHSK-GCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLL 375
           A   F+S H + G    +VS NILI+ +CK+  V+ A+ L++++   G++   +TY TL+
Sbjct: 454 AFA-FVSDHMEVGGFCDIVSCNILIDAFCKVKKVKSALELFKEMDYKGMQADAVTYGTLI 512

Query: 376 SGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLF-HMLEMNKF 434
           +GLF  G    A++LF++M    ++P+++ YNI++  LCK   ++ A K+F HM++    
Sbjct: 513 NGLFSVGYYNLAEELFEQMLKAQIDPNVNLYNIMLHHLCKVGDLKRAQKIFLHMIQKEIL 572

Query: 435 EFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKAND 494
              I  +N LI  L K  R   A +LF  +  KG+ P  +T+  +I+GL  +G+   A +
Sbjct: 573 P-DIVTYNTLIYWLGKNSRAMEALDLFKDMRTKGVEPDSLTFKYLINGLLDEGRSTLAYE 631

Query: 495 FLLYMEKNG 503
              YM +NG
Sbjct: 632 VWEYMMENG 640



 Score =  191 bits (486), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 126/459 (27%), Positives = 212/459 (46%), Gaps = 13/459 (2%)

Query: 78  FNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEAT 137
           +N   G + KN  +D V  +Y   +S GL     T +  I+        LC  NRI+   
Sbjct: 193 YNRYIGVLIKNCCFDLVEKYYGMALSKGLCLTPFTYSRWIS-------ALCQSNRIELVE 245

Query: 138 WLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYS 197
            L  +M  FG  PD+      I+  C+   L  AL++ +KM       G  +  ++ +Y+
Sbjct: 246 ELLADMDRFGFSPDIWACNIYIDCLCKQNRLHDALQMVEKM------RGKGTIPDVVTYT 299

Query: 198 IIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDL 257
            ++  LC      +A  L+ EM   G+ P VV C  LI G C     EE   L   ML L
Sbjct: 300 TVVGCLCNNKRFSEAVGLWEEMVKMGLKPDVVACGALIFGLCKNSKVEEAFELASRMLSL 359

Query: 258 GPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTA 317
               ++  +N +I    + G I++A  ++  M   G  P   TYN L++ YC +G ++ A
Sbjct: 360 NIELSVSIYNALISGFWRAGSIDKAYTIISFMRTNGCEPGVVTYNILLNHYCTIGMMEKA 419

Query: 318 REIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSG 377
             +   M + G      SYN L+ G CK   +++A +     +  G    +++ N L+  
Sbjct: 420 ENLITKMETSGVNPDRYSYNQLLKGLCKTHQLDKAFAFVSDHMEVGGFCDIVSCNILIDA 479

Query: 378 LFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFG 437
             +  +   A +LF EM    ++ D  TY  LI+GL        A +LF  +   + +  
Sbjct: 480 FCKVKKVKSALELFKEMDYKGMQADAVTYGTLINGLFSVGYYNLAEELFEQMLKAQIDPN 539

Query: 438 IEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLL 497
           + ++N ++  LCK G L  A ++F  + QK ++P +VTY+ +I+ L +  +  +A D   
Sbjct: 540 VNLYNIMLHHLCKVGDLKRAQKIFLHMIQKEILPDIVTYNTLIYWLGKNSRAMEALDLFK 599

Query: 498 YMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAE 536
            M   G  P+ +TF  L++G L   +++   E+   M E
Sbjct: 600 DMRTKGVEPDSLTFKYLINGLLDEGRSTLAYEVWEYMME 638



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 124/423 (29%), Positives = 201/423 (47%), Gaps = 17/423 (4%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAK-NRHYDAVISFYRKLVSIGLL 107
           C+S  I L E       M     SP I + N+    + K NR +DA +    K+   G +
Sbjct: 236 CQSNRIELVEE--LLADMDRFGFSPDIWACNIYIDCLCKQNRLHDA-LQMVEKMRGKGTI 292

Query: 108 PDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGN 167
           PD +T   ++ C       LC   R  EA  L++ M+  G++PDV+  G LI G C+   
Sbjct: 293 PDVVTYTTVVGC-------LCNNKRFSEAVGLWEEMVKMGLKPDVVACGALIFGLCKNSK 345

Query: 168 LSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPA 227
           +  A  L  +M+S + E       ++  Y+ +I    + G +DKA  +   M+  G  P 
Sbjct: 346 VEEAFELASRMLSLNIE------LSVSIYNALISGFWRAGSIDKAYTIISFMRTNGCEPG 399

Query: 228 VVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLE 287
           VV    L++ +C  G  E+   L  +M   G  P+  ++N ++  LCK  ++++A   + 
Sbjct: 400 VVTYNILLNHYCTIGMMEKAENLITKMETSGVNPDRYSYNQLLKGLCKTHQLDKAFAFVS 459

Query: 288 LMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKIL 347
             ++ G   D  + N L+D +C V ++ +A E+F  M  KG +   V+Y  LING   + 
Sbjct: 460 DHMEVGGFCDIVSCNILIDAFCKVKKVKSALELFKEMDYKGMQADAVTYGTLINGLFSVG 519

Query: 348 NVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYN 407
               A  L+ Q++   +   V  YN +L  L + G    AQK+F  M    + PD+ TYN
Sbjct: 520 YYNLAEELFEQMLKAQIDPNVNLYNIMLHHLCKVGDLKRAQKIFLHMIQKEILPDIVTYN 579

Query: 408 ILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQK 467
            LI  L KN+   EA+ LF  +     E     F  LI+GL   GR   A+E++  + + 
Sbjct: 580 TLIYWLGKNSRAMEALDLFKDMRTKGVEPDSLTFKYLINGLLDEGRSTLAYEVWEYMMEN 639

Query: 468 GLV 470
           G++
Sbjct: 640 GII 642



 Score =  169 bits (427), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 108/374 (28%), Positives = 187/374 (50%), Gaps = 10/374 (2%)

Query: 194 FSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIE 253
           F+YS  I +LC+   ++  +EL  +M   G +P +  C   I   C      +   +  +
Sbjct: 226 FTYSRWISALCQSNRIELVEELLADMDRFGFSPDIWACNIYIDCLCKQNRLHDALQMVEK 285

Query: 254 MLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGR 313
           M   G  P+++T+  ++ CLC   + +EA GL E M++ GL PD     +L+ G C   +
Sbjct: 286 MRGKGTIPDVVTYTTVVGCLCNNKRFSEAVGLWEEMVKMGLKPDVVACGALIFGLCKNSK 345

Query: 314 IDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNT 373
           ++ A E+   M S   + +V  YN LI+G+ +  ++++A ++   + +NG    V+TYN 
Sbjct: 346 VEEAFELASRMLSLNIELSVSIYNALISGFWRAGSIDKAYTIISFMRTNGCEPGVVTYNI 405

Query: 374 LLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLF--HMLEM 431
           LL+     G    A+ L  +M+   V PD  +YN L+ GLCK + + +A      HM E+
Sbjct: 406 LLNHYCTIGMMEKAENLITKMETSGVNPDRYSYNQLLKGLCKTHQLDKAFAFVSDHM-EV 464

Query: 432 NKFEFGIEIFNC--LIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKL 489
             F    +I +C  LID  CK  ++ +A ELF ++  KG+    VTY  +I+GL   G  
Sbjct: 465 GGF---CDIVSCNILIDAFCKVKKVKSALELFKEMDYKGMQADAVTYGTLINGLFSVGYY 521

Query: 490 EKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFS 549
             A +    M K    PNV  +N ++H   +     +  ++   M + E  ++PD  T++
Sbjct: 522 NLAEELFEQMLKAQIDPNVNLYNIMLHHLCKVGDLKRAQKIFLHMIQKE--ILPDIVTYN 579

Query: 550 IVVDLLAKDEKYHE 563
            ++  L K+ +  E
Sbjct: 580 TLIYWLGKNSRAME 593



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 121/470 (25%), Positives = 201/470 (42%), Gaps = 80/470 (17%)

Query: 155 YGTLINGFCRTGNLSVALRLHKKMV-SGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAK 213
           Y  L++G+ R G     +    +MV SG  E G+        Y+  I  L K    D  +
Sbjct: 158 YRILLSGYVRAGKFDSVIGTFDEMVMSGCREFGI-------DYNRYIGVLIKNCCFDLVE 210

Query: 214 ELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCL 273
           + +     +G+       +  I   C +   E V  L  +M   G  P++   N+ IDCL
Sbjct: 211 KYYGMALSKGLCLTPFTYSRWISALCQSNRIELVEELLADMDRFGFSPDIWACNIYIDCL 270

Query: 274 CKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTV 333
           CK  ++++A  ++E M  +G  PD  TY +++   C   R   A  ++  M   G K  V
Sbjct: 271 CKQNRLHDALQMVEKMRGKGTIPDVVTYTTVVGCLCNNKRFSEAVGLWEEMVKMGLKPDV 330

Query: 334 VSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDE 393
           V+   LI G CK   VEEA  L  +++S  +  +V  YN L+SG ++AG    A  +   
Sbjct: 331 VACGALIFGLCKNSKVEEAFELASRMLSLNIELSVSIYNALISGFWRAGSIDKAYTIISF 390

Query: 394 MKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM---------------------- 431
           M+    EP + TYNIL++  C    +++A  L   +E                       
Sbjct: 391 MRTNGCEPGVVTYNILLNHYCTIGMMEKAENLITKMETSGVNPDRYSYNQLLKGLCKTHQ 450

Query: 432 ---------NKFEFG--IEIFNC--LIDGLCKAGRLDNAWELFHKLPQKGLVPTVVT--- 475
                    +  E G   +I +C  LID  CK  ++ +A ELF ++  KG+    VT   
Sbjct: 451 LDKAFAFVSDHMEVGGFCDIVSCNILIDAFCKVKKVKSALELFKEMDYKGMQADAVTYGT 510

Query: 476 --------------------------------YSIMIHGLCRKGKLEKANDFLLYMEKNG 503
                                           Y+IM+H LC+ G L++A    L+M +  
Sbjct: 511 LINGLFSVGYYNLAEELFEQMLKAQIDPNVNLYNIMLHHLCKVGDLKRAQKIFLHMIQKE 570

Query: 504 CAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
             P++VT+NTL++   +N++  + ++L   M    + + PD  TF  +++
Sbjct: 571 ILPDIVTYNTLIYWLGKNSRAMEALDLFKDMR--TKGVEPDSLTFKYLIN 618



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 95/344 (27%), Positives = 164/344 (47%), Gaps = 2/344 (0%)

Query: 194 FSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIE 253
           F+ + I+  L  +G      E    ++ +G+     +   L+ G+  AG ++ V G F E
Sbjct: 121 FAIAYIVSLLFVDGNFALLSEFLGTVRSQGVALHRSLYRILLSGYVRAGKFDSVIGTFDE 180

Query: 254 MLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGR 313
           M+  G R   + +N  I  L K    +       + + +GL    FTY+  +   C   R
Sbjct: 181 MVMSGCREFGIDYNRYIGVLIKNCCFDLVEKYYGMALSKGLCLTPFTYSRWISALCQSNR 240

Query: 314 IDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNT 373
           I+   E+   M   G    + + NI I+  CK   + +A+ +  ++   G    V+TY T
Sbjct: 241 IELVEELLADMDRFGFSPDIWACNIYIDCLCKQNRLHDALQMVEKMRGKGTIPDVVTYTT 300

Query: 374 LLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLF-HMLEMN 432
           ++  L    +   A  L++EM    ++PD+     LI GLCKN+ V+EA +L   ML +N
Sbjct: 301 VVGCLCNNKRFSEAVGLWEEMVKMGLKPDVVACGALIFGLCKNSKVEEAFELASRMLSLN 360

Query: 433 KFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKA 492
             E  + I+N LI G  +AG +D A+ +   +   G  P VVTY+I+++  C  G +EKA
Sbjct: 361 -IELSVSIYNALISGFWRAGSIDKAYTIISFMRTNGCEPGVVTYNILLNHYCTIGMMEKA 419

Query: 493 NDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAE 536
            + +  ME +G  P+  ++N L+ G  + ++  K    +    E
Sbjct: 420 ENLITKMETSGVNPDRYSYNQLLKGLCKTHQLDKAFAFVSDHME 463



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 79/311 (25%), Positives = 132/311 (42%), Gaps = 37/311 (11%)

Query: 291 QRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVE 350
            +G+   R  Y  L+ GY   G+ D+    F  M   GC+   + YN  I    K    +
Sbjct: 148 SQGVALHRSLYRILLSGYVRAGKFDSVIGTFDEMVMSGCREFGIDYNRYIGVLIKNCCFD 207

Query: 351 EAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILI 410
                Y   +S G+  T  TY+  +S L Q+ +    ++L  +M  +   PD+   NI I
Sbjct: 208 LVEKYYGMALSKGLCLTPFTYSRWISALCQSNRIELVEELLADMDRFGFSPDIWACNIYI 267

Query: 411 DGLCKNNCVQEAVKLFHML---------------------------------EMNKFEFG 437
           D LCK N + +A+++   +                                 EM K    
Sbjct: 268 DCLCKQNRLHDALQMVEKMRGKGTIPDVVTYTTVVGCLCNNKRFSEAVGLWEEMVKMGLK 327

Query: 438 IEIFNC--LIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDF 495
            ++  C  LI GLCK  +++ A+EL  ++    +  +V  Y+ +I G  R G ++KA   
Sbjct: 328 PDVVACGALIFGLCKNSKVEEAFELASRMLSLNIELSVSIYNALISGFWRAGSIDKAYTI 387

Query: 496 LLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLL 555
           + +M  NGC P VVT+N L++ +       K   L+ KM     N  PD  +++ ++  L
Sbjct: 388 ISFMRTNGCEPGVVTYNILLNHYCTIGMMEKAENLITKMETSGVN--PDRYSYNQLLKGL 445

Query: 556 AKDEKYHECSA 566
            K  +  +  A
Sbjct: 446 CKTHQLDKAFA 456


>gi|414875981|tpg|DAA53112.1| TPA: hypothetical protein ZEAMMB73_920038 [Zea mays]
          Length = 574

 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 133/433 (30%), Positives = 218/433 (50%), Gaps = 16/433 (3%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
           P   S N L  A+ +    D     +R  +   + PD  T NI+I+       G C   +
Sbjct: 151 PSAFSVNALLAALVRADRVDLADRAFRAALRRRVSPDLFTFNIVIS-------GFCKTGQ 203

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALR---LHKKMVSGDYENGLIS 189
           +++A  + KN+ A+GV P V TY TLI+G+C+ G +        L K+M+          
Sbjct: 204 LRKAGDVAKNISAWGVAPSVATYNTLIDGYCKRGQVGKMYHVDALLKEMIQAGIS----- 258

Query: 190 KTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNG 249
             ++ +++++I+  CKE  +  A ++F EM+ +GI   VV   +L+ G C  G  E+   
Sbjct: 259 -PDVVTFNVLINGYCKEPNITAAIKVFQEMRQQGIPANVVTYNSLVSGLCREGKVEDSIK 317

Query: 250 LFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYC 309
           L  EM +LG    L T N +++  CK G + EA G ++ + QRG+ P+  TYN+L+DGY 
Sbjct: 318 LVEEMEELGLACILSTMNSVLNGFCKKGMMVEAEGWVDGIAQRGMKPNVITYNTLVDGYR 377

Query: 310 LVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVI 369
            +G++  A     +M  KG    V +YN LI G+    +      L  ++   GV+  V+
Sbjct: 378 RLGKMKEAAAAKDAMAGKGISPNVKTYNCLITGFTTSRDWRSVSGLLDEMKEKGVKADVV 437

Query: 370 TYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHML 429
           TYN L+  L   G+   A KL DEM    +EP    YN +I+G C+    Q A ++   +
Sbjct: 438 TYNVLIGALCCKGEVRKAVKLLDEMVEVGLEPKHVAYNTIINGFCEKGDAQGAHEIRLRM 497

Query: 430 EMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKL 489
           E  K    +  +N  +   CK G++D A  + +++ +KGLVP  +TY I+  G+  KG +
Sbjct: 498 EKRKKRANVVTYNVFLKYFCKMGKMDEANVVLNEMLEKGLVPNRITYEIINSGMIEKGYV 557

Query: 490 EKANDFLLYMEKN 502
              + +   + KN
Sbjct: 558 PDISGYAADVSKN 570



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 121/380 (31%), Positives = 198/380 (52%), Gaps = 17/380 (4%)

Query: 148 VRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEG 207
           V PD+ T+  +I+GFC+TG L  A  + K + +           ++ +Y+ +ID  CK G
Sbjct: 184 VSPDLFTFNIVISGFCKTGQLRKAGDVAKNISAWGVA------PSVATYNTLIDGYCKRG 237

Query: 208 LVDK---AKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLL 264
            V K      L  EM   GI+P VV    LI+G+C   N      +F EM   G   N++
Sbjct: 238 QVGKMYHVDALLKEMIQAGISPDVVTFNVLINGYCKEPNITAAIKVFQEMRQQGIPANVV 297

Query: 265 TFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSM 324
           T+N ++  LC+ GK+ ++  L+E M + GL     T NS+++G+C  G +  A      +
Sbjct: 298 TYNSLVSGLCREGKVEDSIKLVEEMEELGLACILSTMNSVLNGFCKKGMMVEAEGWVDGI 357

Query: 325 HSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQA 384
             +G K  V++YN L++GY ++  ++EA +    +   G+   V TYN L++G   +   
Sbjct: 358 AQRGMKPNVITYNTLVDGYRRLGKMKEAAAAKDAMAGKGISPNVKTYNCLITGFTTSRDW 417

Query: 385 GYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIE----I 440
                L DEMK   V+ D+ TYN+LI  LC    V++AVKL    EM   E G+E     
Sbjct: 418 RSVSGLLDEMKEKGVKADVVTYNVLIGALCCKGEVRKAVKLLD--EM--VEVGLEPKHVA 473

Query: 441 FNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYME 500
           +N +I+G C+ G    A E+  ++ ++     VVTY++ +   C+ GK+++AN  L  M 
Sbjct: 474 YNTIINGFCEKGDAQGAHEIRLRMEKRKKRANVVTYNVFLKYFCKMGKMDEANVVLNEML 533

Query: 501 KNGCAPNVVTFNTLMHGFLQ 520
           + G  PN +T+  +  G ++
Sbjct: 534 EKGLVPNRITYEIINSGMIE 553



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 112/363 (30%), Positives = 187/363 (51%), Gaps = 5/363 (1%)

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFC---CAGNWEEVN 248
           ++F+++I+I   CK G + KA ++   +   G+ P+V    TLI G+C     G    V+
Sbjct: 187 DLFTFNIVISGFCKTGQLRKAGDVAKNISAWGVAPSVATYNTLIDGYCKRGQVGKMYHVD 246

Query: 249 GLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGY 308
            L  EM+  G  P+++TFNV+I+  CK   I  A  + + M Q+G+  +  TYNSL+ G 
Sbjct: 247 ALLKEMIQAGISPDVVTFNVLINGYCKEPNITAAIKVFQEMRQQGIPANVVTYNSLVSGL 306

Query: 309 CLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTV 368
           C  G+++ + ++   M   G    + + N ++NG+CK   + EA      I   G++  V
Sbjct: 307 CREGKVEDSIKLVEEMEELGLACILSTMNSVLNGFCKKGMMVEAEGWVDGIAQRGMKPNV 366

Query: 369 ITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHM 428
           ITYNTL+ G  + G+   A    D M    + P++ TYN LI G   +   +    L   
Sbjct: 367 ITYNTLVDGYRRLGKMKEAAAAKDAMAGKGISPNVKTYNCLITGFTTSRDWRSVSGLLDE 426

Query: 429 LEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGK 488
           ++    +  +  +N LI  LC  G +  A +L  ++ + GL P  V Y+ +I+G C KG 
Sbjct: 427 MKEKGVKADVVTYNVLIGALCCKGEVRKAVKLLDEMVEVGLEPKHVAYNTIINGFCEKGD 486

Query: 489 LEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTF 548
            + A++  L MEK     NVVT+N  +  F +  K  +   +L++M   E+ LVP+  T+
Sbjct: 487 AQGAHEIRLRMEKRKKRANVVTYNVFLKYFCKMGKMDEANVVLNEML--EKGLVPNRITY 544

Query: 549 SIV 551
            I+
Sbjct: 545 EII 547



 Score =  105 bits (263), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 79/305 (25%), Positives = 143/305 (46%), Gaps = 38/305 (12%)

Query: 32  AAVSSPETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHY 91
           A +S      N  ++  CK    N+  A   F  M        + ++N L   + +    
Sbjct: 255 AGISPDVVTFNVLINGYCKEP--NITAAIKVFQEMRQQGIPANVVTYNSLVSGLCREGKV 312

Query: 92  DAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPD 151
           +  I    ++  +GL     T+N ++N       G C +  + EA      +   G++P+
Sbjct: 313 EDSIKLVEEMEELGLACILSTMNSVLN-------GFCKKGMMVEAEGWVDGIAQRGMKPN 365

Query: 152 VITYGTLINGFCR---------------TGNLSVALRLHKKMVSG-----DYE--NGLIS 189
           VITY TL++G+ R                  +S  ++ +  +++G     D+   +GL+ 
Sbjct: 366 VITYNTLVDGYRRLGKMKEAAAAKDAMAGKGISPNVKTYNCLITGFTTSRDWRSVSGLLD 425

Query: 190 -------KTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAG 242
                  K ++ +Y+++I +LC +G V KA +L  EM   G+ P  V   T+I+GFC  G
Sbjct: 426 EMKEKGVKADVVTYNVLIGALCCKGEVRKAVKLLDEMVEVGLEPKHVAYNTIINGFCEKG 485

Query: 243 NWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYN 302
           + +  + + + M     R N++T+NV +   CK GK++EAN +L  M+++GL P+R TY 
Sbjct: 486 DAQGAHEIRLRMEKRKKRANVVTYNVFLKYFCKMGKMDEANVVLNEMLEKGLVPNRITYE 545

Query: 303 SLMDG 307
            +  G
Sbjct: 546 IINSG 550


>gi|356498873|ref|XP_003518272.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 566

 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 132/456 (28%), Positives = 227/456 (49%), Gaps = 26/456 (5%)

Query: 44  FLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVS 103
            + E CK G      A    G +         +S+N+L  A  K+   +  +   R L  
Sbjct: 110 LIREFCKIG--RTKNATRIMGILEESGAVIDANSYNVLINAYCKSGEIEEAL---RVLDH 164

Query: 104 IGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFC 163
             + P+  T + ++ C       LC   ++K+A  +    +     PDV+T   LI+  C
Sbjct: 165 TSVAPNAATYDAVL-C------SLCDRGKLKQAMQVLDRQLQSKCYPDVVTCTVLIDATC 217

Query: 164 RTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRG 223
           +   +  A++L  +M       G   K ++ +Y+++I   CKEG +D+A     ++   G
Sbjct: 218 KESGVGQAMKLFNEM------RGKGCKPDVVTYNVLIKGFCKEGRLDEAIIFLKKLPSYG 271

Query: 224 INPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEAN 283
               V+    ++   C  G W +   L   ML  G  P+++TFN++I+ LC+ G + +A 
Sbjct: 272 CQSDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCFPSVVTFNILINFLCQKGLLGKAL 331

Query: 284 GLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGY 343
            +LE+M + G  P+  ++N L+ G+C    ID A E    M S+GC   +V+YNIL+   
Sbjct: 332 NVLEMMPKHGHTPNSRSFNPLIQGFCNRKGIDRAIEHLEIMVSRGCYPDIVTYNILLTAL 391

Query: 344 CKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDL 403
           CK   V++A+ +  Q+ S G   ++I+YNT++ GL + G+A  A +L +EM    ++PDL
Sbjct: 392 CKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDL 451

Query: 404 STYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIE----IFNCLIDGLCKAGRLDNAWE 459
            T   ++ GL +   V EA+K FH L+     FGI+    I+N ++ GLCKA +   A +
Sbjct: 452 ITCTSVVGGLSREGKVHEAIKFFHYLK----GFGIKPNAFIYNSIMMGLCKAQQTSLAID 507

Query: 460 LFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDF 495
               +   G  PT  +Y+ +I G+  +G  E+A+  
Sbjct: 508 FLVDMVANGCKPTEASYTTLIKGITYEGLAEEASKL 543



 Score =  194 bits (494), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 133/478 (27%), Positives = 226/478 (47%), Gaps = 22/478 (4%)

Query: 97  FYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYG 156
           F   + + G +PD +    LI       R  C   R K AT +   +   G   D  +Y 
Sbjct: 91  FLEYMTNKGKIPDVVACTALI-------REFCKIGRTKNATRIMGILEESGAVIDANSYN 143

Query: 157 TLINGFCRTGNLSVALRL--HKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKE 214
            LIN +C++G +  ALR+  H  +             N  +Y  ++ SLC  G + +A +
Sbjct: 144 VLINAYCKSGEIEEALRVLDHTSVAP-----------NAATYDAVLCSLCDRGKLKQAMQ 192

Query: 215 LFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLC 274
           +          P VV CT LI   C      +   LF EM   G +P+++T+NV+I   C
Sbjct: 193 VLDRQLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRGKGCKPDVVTYNVLIKGFC 252

Query: 275 KGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVV 334
           K G+++EA   L+ +   G   D  ++N ++   C  GR   A ++  +M  KGC  +VV
Sbjct: 253 KEGRLDEAIIFLKKLPSYGCQSDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCFPSVV 312

Query: 335 SYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEM 394
           ++NILIN  C+   + +A+++   +  +G      ++N L+ G         A +  + M
Sbjct: 313 TFNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNRKGIDRAIEHLEIM 372

Query: 395 KLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRL 454
                 PD+ TYNIL+  LCK+  V +AV +   L        +  +N +IDGL K G+ 
Sbjct: 373 VSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKA 432

Query: 455 DNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTL 514
           + A EL  ++  KGL P ++T + ++ GL R+GK+ +A  F  Y++  G  PN   +N++
Sbjct: 433 ELAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVHEAIKFFHYLKGFGIKPNAFIYNSI 492

Query: 515 MHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKSSY 572
           M G  +  +TS  ++ L  M        P + +++ ++  +  +    E S +S   Y
Sbjct: 493 MMGLCKAQQTSLAIDFLVDMV--ANGCKPTEASYTTLIKGITYEGLAEEASKLSNELY 548



 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 119/393 (30%), Positives = 190/393 (48%), Gaps = 34/393 (8%)

Query: 203 LCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAG---NWEEVNGLFIE------ 253
           L + G +++       M  +G  P VV CT LI  FC  G   N   + G+  E      
Sbjct: 79  LIRNGELEEGSRFLEYMTNKGKIPDVVACTALIREFCKIGRTKNATRIMGILEESGAVID 138

Query: 254 ----------------------MLD-LGPRPNLLTFNVMIDCLCKGGKINEANGLLELMI 290
                                 +LD     PN  T++ ++  LC  GK+ +A  +L+  +
Sbjct: 139 ANSYNVLINAYCKSGEIEEALRVLDHTSVAPNAATYDAVLCSLCDRGKLKQAMQVLDRQL 198

Query: 291 QRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVE 350
           Q    PD  T   L+D  C    +  A ++F  M  KGCK  VV+YN+LI G+CK   ++
Sbjct: 199 QSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRGKGCKPDVVTYNVLIKGFCKEGRLD 258

Query: 351 EAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILI 410
           EA+   +++ S G +  VI++N +L  L   G+   A KL   M      P + T+NILI
Sbjct: 259 EAIIFLKKLPSYGCQSDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCFPSVVTFNILI 318

Query: 411 DGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLV 470
           + LC+   + +A+ +  M+  +        FN LI G C    +D A E    +  +G  
Sbjct: 319 NFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNRKGIDRAIEHLEIMVSRGCY 378

Query: 471 PTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVEL 530
           P +VTY+I++  LC+ GK++ A   L  +   GC+P+++++NT++ G L+  K    VEL
Sbjct: 379 PDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVEL 438

Query: 531 LHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
           L +M    + L PD  T + VV  L+++ K HE
Sbjct: 439 LEEMC--YKGLKPDLITCTSVVGGLSREGKVHE 469



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 103/417 (24%), Positives = 187/417 (44%), Gaps = 41/417 (9%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
           N  ++  CKSG     E       + H   +P  ++++ +  ++         +    + 
Sbjct: 143 NVLINAYCKSG-----EIEEALRVLDHTSVAPNAATYDAVLCSLCDRGKLKQAMQVLDRQ 197

Query: 102 VSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLING 161
           +     PD +T  +LI+         C E+ + +A  LF  M   G +PDV+TY  LI G
Sbjct: 198 LQSKCYPDVVTCTVLID-------ATCKESGVGQAMKLFNEMRGKGCKPDVVTYNVLIKG 250

Query: 162 FCRTGNLSVALRLHKKMVSGDYENGLISKT-----------------------------N 192
           FC+ G L  A+   KK+ S   ++ +IS                               +
Sbjct: 251 FCKEGRLDEAIIFLKKLPSYGCQSDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCFPS 310

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
           + +++I+I+ LC++GL+ KA  +   M   G  P       LI GFC     +       
Sbjct: 311 VVTFNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNRKGIDRAIEHLE 370

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
            M+  G  P+++T+N+++  LCK GK+++A  +L  +  +G +P   +YN+++DG   VG
Sbjct: 371 IMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVG 430

Query: 313 RIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYN 372
           + + A E+   M  KG K  +++   ++ G  +   V EA+  +  +   G++     YN
Sbjct: 431 KAELAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVHEAIKFFHYLKGFGIKPNAFIYN 490

Query: 373 TLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHML 429
           +++ GL +A Q   A     +M     +P  ++Y  LI G+      +EA KL + L
Sbjct: 491 SIMMGLCKAQQTSLAIDFLVDMVANGCKPTEASYTTLIKGITYEGLAEEASKLSNEL 547



 Score =  129 bits (323), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 100/372 (26%), Positives = 166/372 (44%), Gaps = 40/372 (10%)

Query: 29  RQIAAVSSPET-QLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAK 87
           RQ+ +   P+       +   CK     + +A   F  M      P + ++N+L     K
Sbjct: 196 RQLQSKCYPDVVTCTVLIDATCKES--GVGQAMKLFNEMRGKGCKPDVVTYNVLIKGFCK 253

Query: 88  NRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFG 147
               D  I F +KL S G   D ++ N+++       R LC   R  +A  L   M+  G
Sbjct: 254 EGRLDEAIIFLKKLPSYGCQSDVISHNMIL-------RSLCSGGRWMDAMKLLATMLRKG 306

Query: 148 VRPDVITYGTLINGFCRTGNLSVAL---------------RLHKKMVSG----------- 181
             P V+T+  LIN  C+ G L  AL               R    ++ G           
Sbjct: 307 CFPSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNRKGIDRAI 366

Query: 182 DYENGLISK---TNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGF 238
           ++   ++S+    +I +Y+I++ +LCK+G VD A  +  ++  +G +P+++   T+I G 
Sbjct: 367 EHLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGL 426

Query: 239 CCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDR 298
              G  E    L  EM   G +P+L+T   ++  L + GK++EA      +   G+ P+ 
Sbjct: 427 LKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVHEAIKFFHYLKGFGIKPNA 486

Query: 299 FTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQ 358
           F YNS+M G C   +   A +  + M + GCK T  SY  LI G       EEA  L  +
Sbjct: 487 FIYNSIMMGLCKAQQTSLAIDFLVDMVANGCKPTEASYTTLIKGITYEGLAEEASKLSNE 546

Query: 359 IISNG-VRQTVI 369
           + S G V++++I
Sbjct: 547 LYSRGLVKKSLI 558


>gi|225454948|ref|XP_002277434.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
           mitochondrial-like [Vitis vinifera]
          Length = 835

 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 129/446 (28%), Positives = 223/446 (50%), Gaps = 16/446 (3%)

Query: 113 LNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVAL 172
            N+LI+       G C    I  A  L + M   G  PD++TY TL+NGFC+ G+L  A 
Sbjct: 20  FNVLID-------GYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAK 72

Query: 173 RLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCT 232
           +L  ++   + E       N+ +Y+ +ID+ CK   ++ A  ++ EM  + + P VV  T
Sbjct: 73  KLMGEISLVNLE------PNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYT 126

Query: 233 TLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQR 292
            +++G C +G  EE   +F EM ++G  PN  ++  +ID L K G + EA  L   M+ R
Sbjct: 127 CIMNGLCKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVR 186

Query: 293 GLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEA 352
           G+  D   Y +LMDG    G  + A ++F  +  +      V+Y+ LI+G+CK+ +V + 
Sbjct: 187 GIGFDVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKG 246

Query: 353 MSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDG 412
             L +++    +   VI Y++++ G  + G    A  +  +M   N+ P++  Y  LIDG
Sbjct: 247 ELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDG 306

Query: 413 LCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPT 472
             K +    A+ LF  ++    E    + +  ++ L ++GR++ A ELF  +  +GL+P 
Sbjct: 307 YFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPD 366

Query: 473 VVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLH 532
            V Y+ M+ G  + GK   A +    M +     +VV +N L++G  +  K     E  H
Sbjct: 367 RVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYES--ESFH 424

Query: 533 KMAEPERNLVPDDTTFSIVVDLLAKD 558
                +  L PD  TF+ +++   K+
Sbjct: 425 -TGMRQLGLAPDSATFNTMINAYCKE 449



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 134/488 (27%), Positives = 242/488 (49%), Gaps = 16/488 (3%)

Query: 68  HMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGL 127
           H +    +  FN+L     +N      +     + + G  PD +T N L+N       G 
Sbjct: 10  HPEIRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMN-------GF 62

Query: 128 CVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGL 187
           C    +  A  L   +    + P+VITY TLI+ +C++  L  AL ++ +M        L
Sbjct: 63  CKIGDLFTAKKLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTV----KSL 118

Query: 188 ISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEV 247
           +   ++ +Y+ I++ LCK G V++AK +F EM+  G+ P      TLI      GN  E 
Sbjct: 119 VP--DVVTYTCIMNGLCKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEA 176

Query: 248 NGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDG 307
             L   M+  G   +++ +  ++D L K G  N A  + +++++  L P+  TY++L+DG
Sbjct: 177 FVLQGRMVVRGIGFDVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDG 236

Query: 308 YCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQT 367
           +C +G ++    +   M  K     V+ Y+ +++GY K   + EAM + R+++   +   
Sbjct: 237 HCKLGDVNKGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPN 296

Query: 368 VITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFH 427
           V  Y TL+ G F+A Q G A  LF EMK   +E +    +  ++ L ++  ++EA +LF 
Sbjct: 297 VFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFK 356

Query: 428 MLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKG 487
            +           +  ++DG  KAG+  +A+ +  ++ +K     VV Y+++I+GL + G
Sbjct: 357 DMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLG 416

Query: 488 KLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTT 547
           K E +  F   M + G AP+  TFNT+++ + +       ++LL++M      L P+  T
Sbjct: 417 KYE-SESFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMK--SYGLKPNSIT 473

Query: 548 FSIVVDLL 555
            +I+V  L
Sbjct: 474 CNILVQRL 481



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 131/532 (24%), Positives = 248/532 (46%), Gaps = 32/532 (6%)

Query: 56  LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNI 115
           LNEA      M      P +  +  L     K       +  ++++ S GL  +    N 
Sbjct: 278 LNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEEN----NF 333

Query: 116 LINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLH 175
           +I+ F N    L    R++EA  LFK+M++ G+ PD + Y ++++GF + G  S A  + 
Sbjct: 334 VIDSFVN---NLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIA 390

Query: 176 KKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLI 235
           ++M          S  ++ +Y+++I+ L K G  + ++     M+  G+ P      T+I
Sbjct: 391 QEMTEKS------SGFDVVAYNVLINGLFKLGKYE-SESFHTGMRQLGLAPDSATFNTMI 443

Query: 236 HGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLN 295
           + +C  GN      L  EM   G +PN +T N+++  LC  G+I +   LL  M+  G +
Sbjct: 444 NAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFH 503

Query: 296 PDRFTYNSLMDGYCLVGRIDTAREIFLSMHSK----GCKHTVVSYNILINGYCKILNVEE 351
           P   T+ +++D      R D    + L MH +    G K  + +YN LI+ +C++  +  
Sbjct: 504 PTPTTHKAVLDASSKSRRAD----VILHMHDQLVGMGVKLDLSTYNTLISTFCRLGMIRR 559

Query: 352 AMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILID 411
           A  +++ ++  G+   +ITYN L+ G   +     A  +  +M    V P++ TYNIL+ 
Sbjct: 560 ATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLG 619

Query: 412 GLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVP 471
           GL     ++EA  L + ++          ++ L+ G  K G +    +L+ ++  KG VP
Sbjct: 620 GLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITKGFVP 679

Query: 472 TVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELL 531
              TY+++I    +  K+ +A + +  M+  G  PN  T++ L+ G+ + +K  ++ + L
Sbjct: 680 KTRTYNVLISCFAKGKKMSQAKELMQEMQVRGIPPNSSTYDILICGWYKLSKQPELNKSL 739

Query: 532 HKMAEP----------ERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKSSYR 573
            +  +           E+  +P + T + +   LAK  K  +   +    Y+
Sbjct: 740 KRSYQAEAKRLFEEMNEKGFIPCENTLACISFTLAKPGKKADAQRILNKLYK 791



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 59/194 (30%), Positives = 103/194 (53%), Gaps = 2/194 (1%)

Query: 364 VRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAV 423
           +R++V  +N L+ G  + G+   A +L + MK     PD+ TYN L++G CK   +  A 
Sbjct: 13  IRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAK 72

Query: 424 KLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGL 483
           KL   + +   E  +  +  LID  CK+  L++A  ++ ++  K LVP VVTY+ +++GL
Sbjct: 73  KLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGL 132

Query: 484 CRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVP 543
           C+ GK+E+A      ME+ G  PN  ++ TL+    +    ++   L  +M    R +  
Sbjct: 133 CKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMV--VRGIGF 190

Query: 544 DDTTFSIVVDLLAK 557
           D   ++ ++D L K
Sbjct: 191 DVVVYTALMDGLFK 204


>gi|449435202|ref|XP_004135384.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g22960, mitochondrial-like [Cucumis sativus]
          Length = 717

 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 130/440 (29%), Positives = 215/440 (48%), Gaps = 15/440 (3%)

Query: 98  YRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGT 157
           + K++  GLLPD    N ++       R L  EN + +A  ++  M  FG++P V+TY T
Sbjct: 168 FDKMIRNGLLPDVKNCNRIL-------RVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNT 220

Query: 158 LINGFCRTGNLSVALRLHKKMVS-GDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELF 216
           +++ +C+ G +  AL L  +M   G Y N +       +Y+++++ L K+G +++AK L 
Sbjct: 221 MLDSYCKEGRVDQALELLSEMQERGCYPNDV-------TYNVLVNGLSKKGELEQAKGLI 273

Query: 217 LEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKG 276
            EM   G+N +      LI+GFC  G + E   L  EM++    P L T+N ++  LCK 
Sbjct: 274 EEMLNSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKW 333

Query: 277 GKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSY 336
            ++         M++    PD  ++NSL+ GYC  G I  A  +F  +  +    TV++Y
Sbjct: 334 VQVTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITY 393

Query: 337 NILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKL 396
           N LI+G C    ++ A+ L +++   G+   + TY  L++G F+ G    A+  F+EM  
Sbjct: 394 NTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLS 453

Query: 397 YNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDN 456
             ++PD   YN  I G  K      A  +   +    F   +  +N  +  LC+ G  + 
Sbjct: 454 KGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEE 513

Query: 457 AWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMH 516
           A +L   +   GL+P  VTY+ +I+G  + G L KA +    M   G AP+VVT+  L+H
Sbjct: 514 ACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIH 573

Query: 517 GFLQNNKTSKVVELLHKMAE 536
                           KM E
Sbjct: 574 AHAAKQMLDLAFMYFSKMLE 593



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 129/501 (25%), Positives = 233/501 (46%), Gaps = 36/501 (7%)

Query: 56  LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNI 115
           L++A+  +G M      P + ++N +  +  K    D  +    ++   G  P+ +T N+
Sbjct: 196 LSKAKNVYGMMEQFGIKPTVVTYNTMLDSYCKEGRVDQALELLSEMQERGCYPNDVTYNV 255

Query: 116 LINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLH 175
           L+N       GL  +  +++A  L + M+  G+     TY  LINGFC+ G    A  L 
Sbjct: 256 LVN-------GLSKKGELEQAKGLIEEMLNSGLNVSAYTYNPLINGFCQKGLFVEAFDLV 308

Query: 176 KKMVSGD---------------------------YENGLISK--TNIFSYSIIIDSLCKE 206
           ++MV+                             + + L SK   +I S++ ++   C+ 
Sbjct: 309 EEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRT 368

Query: 207 GLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTF 266
           G + +A  LF E+K R + P V+   TLIHG C  G  +    L  EM D G  P++ T+
Sbjct: 369 GCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTY 428

Query: 267 NVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHS 326
            ++++   K G ++ A G    M+ +GL PDRF YN+ + G   +     A  +   M +
Sbjct: 429 TILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLA 488

Query: 327 KGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGY 386
            G    V++YN+ ++  C+  N EEA  L   ++S+G+    +TY ++++G  + G    
Sbjct: 489 AGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRK 548

Query: 387 AQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLID 446
           A+++F+EM    V P + TY +LI        +  A   F  +        +  +N +I+
Sbjct: 549 AREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIIN 608

Query: 447 GLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAP 506
           GLC   R+D A++ F ++ +KG++P   +Y+I+I+  C  G  E+A      M      P
Sbjct: 609 GLCMTRRMDEAYKYFDEMEEKGILPNKFSYTILINESCNMGYWEEALRLYREMLDRKIQP 668

Query: 507 NVVTFNTLMHGFLQNNKTSKV 527
           +  T +  +    ++ +   V
Sbjct: 669 DSFTHSVFLKNLHRDYQVHAV 689



 Score =  175 bits (443), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 111/396 (28%), Positives = 196/396 (49%), Gaps = 37/396 (9%)

Query: 199 IIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLG 258
           I+  L  E L+ KAK ++  M+  GI P VV   T++  +C  G  ++   L  EM + G
Sbjct: 186 ILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDSYCKEGRVDQALELLSEMQERG 245

Query: 259 PRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAR 318
             PN +T+NV+++ L K G++ +A GL+E M+  GLN   +TYN L++G+C  G    A 
Sbjct: 246 CYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSAYTYNPLINGFCQKGLFVEAF 305

Query: 319 EIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGL 378
           ++   M ++    T+ +YN L+ G CK + V      +  ++ +     ++++N+LL G 
Sbjct: 306 DLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDMLKSKFTPDIVSFNSLLYGY 365

Query: 379 FQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGI 438
            + G    A  LFDE+K  ++ P + TYN LI GLC    +  A++L   +        I
Sbjct: 366 CRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDI 425

Query: 439 EIFNCLIDGLCKAGRLDNAWELFHKLPQKGL----------------------------- 469
             +  L++G  K G +  A   F+++  KGL                             
Sbjct: 426 FTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEE 485

Query: 470 ------VPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNK 523
                  P V+TY++ +H LC++G  E+A D L  M  +G  P+ VT+ ++++GF++N  
Sbjct: 486 MLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGH 545

Query: 524 TSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDE 559
             K  E+ ++M    + + P   T+++++   A  +
Sbjct: 546 LRKAREVFNEML--SKGVAPSVVTYTVLIHAHAAKQ 579



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 101/349 (28%), Positives = 171/349 (48%), Gaps = 2/349 (0%)

Query: 215 LFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLC 274
           +F +M   G+ P V  C  ++          +   ++  M   G +P ++T+N M+D  C
Sbjct: 167 VFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDSYC 226

Query: 275 KGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVV 334
           K G++++A  LL  M +RG  P+  TYN L++G    G ++ A+ +   M + G   +  
Sbjct: 227 KEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSAY 286

Query: 335 SYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEM 394
           +YN LING+C+     EA  L  ++++     T+ TYNTL+ GL +  Q    +  F +M
Sbjct: 287 TYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDM 346

Query: 395 KLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRL 454
                 PD+ ++N L+ G C+  C+ EA  LF  L+       +  +N LI GLC  G L
Sbjct: 347 LKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYL 406

Query: 455 DNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTL 514
           D A  L  ++  +GL P + TY+I+++G  + G +  A  F   M   G  P+   +NT 
Sbjct: 407 DAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTR 466

Query: 515 MHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
           + G ++   TS    +  +M        PD  T+++ V  L +   + E
Sbjct: 467 IVGEMKIADTSVAFSMQEEMLAA--GFPPDVITYNVFVHALCQQGNFEE 513


>gi|147841407|emb|CAN66681.1| hypothetical protein VITISV_005087 [Vitis vinifera]
          Length = 882

 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 129/446 (28%), Positives = 223/446 (50%), Gaps = 16/446 (3%)

Query: 113 LNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVAL 172
            N+LI+       G C    I  A  L + M   G  PD++TY TL+NGFC+ G+L  A 
Sbjct: 20  FNVLID-------GYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAK 72

Query: 173 RLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCT 232
           +L  ++   + E       N+ +Y+ +ID+ CK   ++ A  ++ EM  + + P VV  T
Sbjct: 73  KLMGEISLVNLE------PNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYT 126

Query: 233 TLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQR 292
            +++G C +G  EE   +F EM ++G  PN  ++  +ID L K G + EA  L   M+ R
Sbjct: 127 CIMNGLCKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVR 186

Query: 293 GLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEA 352
           G+  D   Y +LMDG    G  + A ++F  +  +      V+Y+ LI+G+CK+ +V + 
Sbjct: 187 GIGFDVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKG 246

Query: 353 MSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDG 412
             L +++    +   VI Y++++ G  + G    A  +  +M   N+ P++  Y  LIDG
Sbjct: 247 ELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDG 306

Query: 413 LCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPT 472
             K +    A+ LF  ++    E    + +  ++ L ++GR++ A ELF  +  +GL+P 
Sbjct: 307 YFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPD 366

Query: 473 VVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLH 532
            V Y+ M+ G  + GK   A +    M +     +VV +N L++G  +  K     E  H
Sbjct: 367 RVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYES--ESFH 424

Query: 533 KMAEPERNLVPDDTTFSIVVDLLAKD 558
                +  L PD  TF+ +++   K+
Sbjct: 425 -TGMRQLGLAPDSATFNTMINAYCKE 449



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 134/488 (27%), Positives = 242/488 (49%), Gaps = 16/488 (3%)

Query: 68  HMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGL 127
           H +    +  FN+L     +N      +     + + G  PD +T N L+N       G 
Sbjct: 10  HPEIRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMN-------GF 62

Query: 128 CVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGL 187
           C    +  A  L   +    + P+VITY TLI+ +C++  L  AL ++ +M        L
Sbjct: 63  CKIGDLFTAKKLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTV----KSL 118

Query: 188 ISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEV 247
           +   ++ +Y+ I++ LCK G V++AK +F EM+  G+ P      TLI      GN  E 
Sbjct: 119 VP--DVVTYTCIMNGLCKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEA 176

Query: 248 NGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDG 307
             L   M+  G   +++ +  ++D L K G  N A  + +++++  L P+  TY++L+DG
Sbjct: 177 FVLQGRMVVRGIGFDVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDG 236

Query: 308 YCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQT 367
           +C +G ++    +   M  K     V+ Y+ +++GY K   + EAM + R+++   +   
Sbjct: 237 HCKLGDVNKGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPN 296

Query: 368 VITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFH 427
           V  Y TL+ G F+A Q G A  LF EMK   +E +    +  ++ L ++  ++EA +LF 
Sbjct: 297 VFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFK 356

Query: 428 MLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKG 487
            +           +  ++DG  KAG+  +A+ +  ++ +K     VV Y+++I+GL + G
Sbjct: 357 DMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLG 416

Query: 488 KLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTT 547
           K E +  F   M + G AP+  TFNT+++ + +       ++LL++M      L P+  T
Sbjct: 417 KYE-SESFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEM--KSYGLKPNSIT 473

Query: 548 FSIVVDLL 555
            +I+V  L
Sbjct: 474 CNILVQRL 481



 Score =  184 bits (468), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 128/528 (24%), Positives = 244/528 (46%), Gaps = 24/528 (4%)

Query: 56  LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNI 115
           LNEA      M      P +  +  L     K       +  ++++ S GL  +    N 
Sbjct: 278 LNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEEN----NF 333

Query: 116 LINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLH 175
           +I+ F N    L    R++EA  LFK+M++ G+ PD + Y ++++GF + G  S A  + 
Sbjct: 334 VIDSFVNN---LKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIA 390

Query: 176 KKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLI 235
           ++M          S  ++ +Y+++I+ L K G  + ++     M+  G+ P      T+I
Sbjct: 391 QEMTEKS------SGFDVVAYNVLINGLFKLGKYE-SESFHTGMRQLGLAPDSATFNTMI 443

Query: 236 HGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLN 295
           + +C  GN      L  EM   G +PN +T N+++  LC  G+I +   LL  M+  G +
Sbjct: 444 NAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFH 503

Query: 296 PDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSL 355
           P   T+ +++D      R D        +   G K  + +YN LI+ +C++  +  A  +
Sbjct: 504 PTPTTHKAVLDASSKSRRADVILHXHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLV 563

Query: 356 YRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCK 415
           ++ ++  G+   +ITYN L+ G   +     A  +  +M    V P++ TYNIL+ GL  
Sbjct: 564 FKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSA 623

Query: 416 NNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVT 475
              ++EA  L + ++          ++ L+ G  K G +    +L+ ++  KG VP   T
Sbjct: 624 ARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITKGFVPKTRT 683

Query: 476 YSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMA 535
           Y+++I    +  K+ +A + +  M+  G  PN  T++ L+ G+ + +K  ++ + L +  
Sbjct: 684 YNVLISCFAKGKKMSQAKELMQEMQVRGIPPNSSTYDILICGWYKLSKQPELNKSLKRSY 743

Query: 536 EP----------ERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKSSYR 573
           +           E+  +P + T + +   LAK  K  +   +    Y+
Sbjct: 744 QAEAKRLFEEMNEKGFIPCENTLACISFTLAKPGKKADAQRILNKLYK 791



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 59/194 (30%), Positives = 103/194 (53%), Gaps = 2/194 (1%)

Query: 364 VRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAV 423
           +R++V  +N L+ G  + G+   A +L + MK     PD+ TYN L++G CK   +  A 
Sbjct: 13  IRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAK 72

Query: 424 KLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGL 483
           KL   + +   E  +  +  LID  CK+  L++A  ++ ++  K LVP VVTY+ +++GL
Sbjct: 73  KLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGL 132

Query: 484 CRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVP 543
           C+ GK+E+A      ME+ G  PN  ++ TL+    +    ++   L  +M    R +  
Sbjct: 133 CKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMV--VRGIGF 190

Query: 544 DDTTFSIVVDLLAK 557
           D   ++ ++D L K
Sbjct: 191 DVVVYTALMDGLFK 204


>gi|449455320|ref|XP_004145401.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Cucumis sativus]
 gi|449471531|ref|XP_004153336.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Cucumis sativus]
          Length = 670

 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 142/531 (26%), Positives = 256/531 (48%), Gaps = 38/531 (7%)

Query: 58  EARYFFGYMTH-MQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLV---SIGLLPDFLTL 113
           EA  FF  M + +     + SFN +   + +   +     FY  +    S G  P+ LT 
Sbjct: 142 EAVNFFHRMANDLHCKQTVKSFNSVLNVIIQEGDFSYAFKFYLHVFGANSKGFQPNLLTY 201

Query: 114 NILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALR 173
           N++I       + LC   +I  A   F+ M      PDV TY TL+NG C+   +  A+ 
Sbjct: 202 NLII-------KALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVF 254

Query: 174 LHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTT 233
           L  +M +     G +   N  +++++ID+L K G + +A +L   M  +G  P  V   T
Sbjct: 255 LLDEMQA----EGCLP--NPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNT 308

Query: 234 LIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRG 293
           LIHG C  G  ++   L  +M+     PN +T+  +I+ L K  +  +   +L  M +RG
Sbjct: 309 LIHGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERG 368

Query: 294 LNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAM 353
              + + Y+SL+ G    G+ + A  ++  M  KGCK  VV Y   I+G C+    +EA 
Sbjct: 369 QKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAE 428

Query: 354 SLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGL 413
            + ++++S G      TY++L+ G F+ G +  A  ++ EM   ++  ++   ++L++GL
Sbjct: 429 DILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGL 488

Query: 414 CKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLP--QKGLVP 471
           C++  ++EA+ ++  +     +  +  ++ +I GLC  G +D   +LF+++   +    P
Sbjct: 489 CESGRLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRP 548

Query: 472 TVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSK----- 526
            VVTY+I+ + LCR+  L +A D L  M   GC P+ +T N  +    +     +     
Sbjct: 549 DVVTYNILFNALCRQDNLTRAIDLLNSMLDEGCDPDSLTCNIFLETLRERINPPQDGRLF 608

Query: 527 VVELLHKMAEPERNLV--------------PDDTTFSIVVDLLAKDEKYHE 563
           + EL+ ++ + ER L               P+ +T+S V+    K ++  E
Sbjct: 609 LDELVVRLLKRERKLSALRIVEEMLLRFLPPEPSTWSRVIQRTCKPKRIRE 659



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 132/506 (26%), Positives = 225/506 (44%), Gaps = 77/506 (15%)

Query: 53  IINLNEARYFFGYMTHMQPS------PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGL 106
           II   +  Y F +  H+  +      P + ++NL+  A+ K    D  +  +R++     
Sbjct: 170 IIQEGDFSYAFKFYLHVFGANSKGFQPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNC 229

Query: 107 LPDFLTLNILINCFGNKERGLCVENRIKEATWLF-------------------------- 140
            PD  T + L+N       GLC E R+ EA +L                           
Sbjct: 230 NPDVFTYSTLMN-------GLCKERRVDEAVFLLDEMQAEGCLPNPVTFNVLIDALSKNG 282

Query: 141 ---------KNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKT 191
                     NM   G  P+ +TY TLI+G C  G L  AL L +KMVS           
Sbjct: 283 DLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMVSSK------CVP 336

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
           N  +Y  II+ L K+   +    + + M+ RG      + ++LI G    G  E    L+
Sbjct: 337 NQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSENAVRLW 396

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
            EM + G +PN++ +   ID LC+  K +EA  +L+ M+ +G  P+ FTY+SLM G+   
Sbjct: 397 KEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKK 456

Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
           G    A  ++  M S+  +H VV  ++L+NG C+   + EA++++  ++  G++  V+ Y
Sbjct: 457 GDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREALTVWTHMLGEGLKPDVVAY 516

Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVE--PDLSTYNILIDGLCKNNCVQEAVKLFHML 429
           ++++ GL   G      KLF EM+    +  PD+ TYNIL + LC+ + +  A+ L + +
Sbjct: 517 SSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDVVTYNILFNALCRQDNLTRAIDLLNSM 576

Query: 430 ---------------------EMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKG 468
                                 +N  + G    + L+  L K  R  +A  +  ++  + 
Sbjct: 577 LDEGCDPDSLTCNIFLETLRERINPPQDGRLFLDELVVRLLKRERKLSALRIVEEMLLRF 636

Query: 469 LVPTVVTYSIMIHGLCRKGKLEKAND 494
           L P   T+S +I   C+  ++ +  D
Sbjct: 637 LPPEPSTWSRVIQRTCKPKRIRETID 662



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 84/290 (28%), Positives = 142/290 (48%), Gaps = 5/290 (1%)

Query: 300 TYNSLMDGYCLVGRIDTAREIFLSM---HSKGCKHTVVSYNILINGYCKILNVEEAMSLY 356
           ++NS+++     G    A + +L +   +SKG +  +++YN++I   CK+  ++ A+  +
Sbjct: 162 SFNSVLNVIIQEGDFSYAFKFYLHVFGANSKGFQPNLLTYNLIIKALCKLGQIDRAVDTF 221

Query: 357 RQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKN 416
           R++        V TY+TL++GL +  +   A  L DEM+     P+  T+N+LID L KN
Sbjct: 222 REMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEGCLPNPVTFNVLIDALSKN 281

Query: 417 NCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTY 476
             +  A KL   + +         +N LI GLC  G+LD A  L  K+     VP  VTY
Sbjct: 282 GDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMVSSKCVPNQVTY 341

Query: 477 SIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAE 536
             +I+GL ++ + E     L+ ME+ G   N   +++L+ G  +  K+   V L  +MAE
Sbjct: 342 GTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAE 401

Query: 537 PERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKSSYRACLYVTIFQPSSL 586
             +   P+   +   +D L +DEK  E   + +           F  SSL
Sbjct: 402 --KGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSL 449


>gi|317106735|dbj|BAJ53231.1| JHL06P13.11 [Jatropha curcas]
          Length = 826

 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 136/469 (28%), Positives = 225/469 (47%), Gaps = 42/469 (8%)

Query: 83  GAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKN 142
           G V + RH         K    G +P+ +  N LI+       G C    I+ A  LFK 
Sbjct: 216 GKVEEGRH------LIEKRWGKGCVPNIVFYNTLID-------GYCKNGDIERANLLFKE 262

Query: 143 MIAFGVRPDVITYGTLINGFCRTGN---------------LSVALRLHKKMVSGDYENG- 186
           +   G  P V TYG +IN FC+ G                L+V+L++   ++   +++G 
Sbjct: 263 LKVKGFLPTVKTYGAMINAFCKKGKFEAVDKLLVEMKERGLAVSLQIFNGIIDARFKHGC 322

Query: 187 ----------LIS---KTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTT 233
                     +I    + ++ +Y+ +I+  C +G V +A+EL      RG+ P     T 
Sbjct: 323 EIEAADAVRWMIESGCEPDMATYNTLINGSCSKGKVREAEELLEHAIRRGLFPNKFSYTP 382

Query: 234 LIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRG 293
           LIH F   G +   + L IEM + G   +L+ +  ++  L   G+++ A  + + M++RG
Sbjct: 383 LIHAFSKNGEYVRASELLIEMSERGHTLDLIAYGALVHGLVVAGEVDVALTVRDKMMERG 442

Query: 294 LNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAM 353
           + PD   YN LM G C  GR   A+++ + M  +           L++G+ +  N++EA 
Sbjct: 443 ILPDANIYNVLMSGLCKKGRFPAAKQLLVEMLDQNVTPDAFVNATLVDGFIRHGNLDEAK 502

Query: 354 SLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGL 413
            L++  I  G+  +V+  N ++ G  + G    A   F  M      PD  TY+ +IDG 
Sbjct: 503 KLFQLTIERGIDTSVVECNAMIKGYCKYGMMNDALLCFKRMFNGVHSPDEFTYSTIIDGY 562

Query: 414 CKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTV 473
            K N ++ A+++F ++     +  +  F  LI+G C+ G L+ A ++F ++   G  P V
Sbjct: 563 VKQNDLRGALRMFGLMLKKTCKPNVVTFTSLINGFCRNGDLNRAEKVFEEMRSFGFEPNV 622

Query: 474 VTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNN 522
           VTY+I+I   C++GKL KA  F   M  N C PN  TFN L++G   NN
Sbjct: 623 VTYTILIGYFCKEGKLTKACFFFEQMLINKCIPNDATFNYLVNGLTNNN 671



 Score =  202 bits (513), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 126/439 (28%), Positives = 219/439 (49%), Gaps = 14/439 (3%)

Query: 125 RGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYE 184
           +GLC E +++E   L +     G  P+++ Y TLI+G+C+ G++  A  L K++    + 
Sbjct: 210 KGLCKEGKVEEGRHLIEKRWGKGCVPNIVFYNTLIDGYCKNGDIERANLLFKELKVKGF- 268

Query: 185 NGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNW 244
                   + +Y  +I++ CK+G  +   +L +EMK RG+  ++ +   +I      G  
Sbjct: 269 -----LPTVKTYGAMINAFCKKGKFEAVDKLLVEMKERGLAVSLQIFNGIIDARFKHGCE 323

Query: 245 EEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSL 304
            E       M++ G  P++ T+N +I+  C  GK+ EA  LLE  I+RGL P++F+Y  L
Sbjct: 324 IEAADAVRWMIESGCEPDMATYNTLINGSCSKGKVREAEELLEHAIRRGLFPNKFSYTPL 383

Query: 305 MDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGV 364
           +  +   G    A E+ + M  +G    +++Y  L++G      V+ A+++  +++  G+
Sbjct: 384 IHAFSKNGEYVRASELLIEMSERGHTLDLIAYGALVHGLVVAGEVDVALTVRDKMMERGI 443

Query: 365 RQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVK 424
                 YN L+SGL + G+   A++L  EM   NV PD      L+DG  ++  + EA K
Sbjct: 444 LPDANIYNVLMSGLCKKGRFPAAKQLLVEMLDQNVTPDAFVNATLVDGFIRHGNLDEAKK 503

Query: 425 LFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLC 484
           LF +      +  +   N +I G CK G +++A   F ++      P   TYS +I G  
Sbjct: 504 LFQLTIERGIDTSVVECNAMIKGYCKYGMMNDALLCFKRMFNGVHSPDEFTYSTIIDGYV 563

Query: 485 RKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQN---NKTSKVVELLHKMAEPERNL 541
           ++  L  A      M K  C PNVVTF +L++GF +N   N+  KV E +          
Sbjct: 564 KQNDLRGALRMFGLMLKKTCKPNVVTFTSLINGFCRNGDLNRAEKVFEEMRSFG-----F 618

Query: 542 VPDDTTFSIVVDLLAKDEK 560
            P+  T++I++    K+ K
Sbjct: 619 EPNVVTYTILIGYFCKEGK 637



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 133/484 (27%), Positives = 225/484 (46%), Gaps = 59/484 (12%)

Query: 99  RKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRP-------- 150
           R ++  G  PD  T N LIN       G C + +++EA  L ++ I  G+ P        
Sbjct: 331 RWMIESGCEPDMATYNTLIN-------GSCSKGKVREAEELLEHAIRRGLFPNKFSYTPL 383

Query: 151 ---------------------------DVITYGTLINGFCRTGNLSVALRLHKKMVSGDY 183
                                      D+I YG L++G    G + VAL +  KM+    
Sbjct: 384 IHAFSKNGEYVRASELLIEMSERGHTLDLIAYGALVHGLVVAGEVDVALTVRDKMM---- 439

Query: 184 ENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGN 243
           E G++   NI  Y++++  LCK+G    AK+L +EM  + + P   V  TL+ GF   GN
Sbjct: 440 ERGILPDANI--YNVLMSGLCKKGRFPAAKQLLVEMLDQNVTPDAFVNATLVDGFIRHGN 497

Query: 244 WEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNS 303
            +E   LF   ++ G   +++  N MI   CK G +N+A    + M     +PD FTY++
Sbjct: 498 LDEAKKLFQLTIERGIDTSVVECNAMIKGYCKYGMMNDALLCFKRMFNGVHSPDEFTYST 557

Query: 304 LMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNG 363
           ++DGY     +  A  +F  M  K CK  VV++  LING+C+  ++  A  ++ ++ S G
Sbjct: 558 IIDGYVKQNDLRGALRMFGLMLKKTCKPNVVTFTSLINGFCRNGDLNRAEKVFEEMRSFG 617

Query: 364 VRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAV 423
               V+TY  L+    + G+   A   F++M +    P+ +T+N L++GL  NN +  + 
Sbjct: 618 FEPNVVTYTILIGYFCKEGKLTKACFFFEQMLINKCIPNDATFNYLVNGLTNNNGIAISS 677

Query: 424 K-----------LFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPT 472
           K            F M+  + +++ I  +N ++  LC+   +  A +L  K+  KG  P 
Sbjct: 678 KRSNSQPNLTLEFFGMMISDGWDWRIAAYNSILLCLCQHKMVKPALQLHDKMMSKGFPPD 737

Query: 473 VVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLH 532
            V++  ++HGLC +G+L+  N+ +            V ++  +  FL    TS    LL 
Sbjct: 738 PVSFIALLHGLCLEGRLQDWNNVIPCNFNERQLQIAVKYSEKLDQFLSEGLTSDASLLLQ 797

Query: 533 KMAE 536
            + E
Sbjct: 798 TLVE 801



 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 142/539 (26%), Positives = 237/539 (43%), Gaps = 49/539 (9%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CK G   + E R+           P I  +N L     KN   +     +++L   G LP
Sbjct: 213 CKEG--KVEEGRHLIEKRWGKGCVPNIVFYNTLIDGYCKNGDIERANLLFKELKVKGFLP 270

Query: 109 DFLTLNILINCFGN--------------KERGLCV---------ENRIK-----EATWLF 140
              T   +IN F                KERGL V         + R K     EA    
Sbjct: 271 TVKTYGAMINAFCKKGKFEAVDKLLVEMKERGLAVSLQIFNGIIDARFKHGCEIEAADAV 330

Query: 141 KNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIII 200
           + MI  G  PD+ TY TLING C  G +  A  L +  +      GL    N FSY+ +I
Sbjct: 331 RWMIESGCEPDMATYNTLINGSCSKGKVREAEELLEHAI----RRGLFP--NKFSYTPLI 384

Query: 201 DSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPR 260
            +  K G   +A EL +EM  RG    ++    L+HG   AG  +    +  +M++ G  
Sbjct: 385 HAFSKNGEYVRASELLIEMSERGHTLDLIAYGALVHGLVVAGEVDVALTVRDKMMERGIL 444

Query: 261 PNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREI 320
           P+   +NV++  LCK G+   A  LL  M+ + + PD F   +L+DG+   G +D A+++
Sbjct: 445 PDANIYNVLMSGLCKKGRFPAAKQLLVEMLDQNVTPDAFVNATLVDGFIRHGNLDEAKKL 504

Query: 321 FLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQ 380
           F     +G   +VV  N +I GYCK   + +A+  ++++ +        TY+T++ G  +
Sbjct: 505 FQLTIERGIDTSVVECNAMIKGYCKYGMMNDALLCFKRMFNGVHSPDEFTYSTIIDGYVK 564

Query: 381 AGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEI 440
                 A ++F  M     +P++ T+  LI+G C+N  +  A K+F  +    FE  +  
Sbjct: 565 QNDLRGALRMFGLMLKKTCKPNVVTFTSLINGFCRNGDLNRAEKVFEEMRSFGFEPNVVT 624

Query: 441 FNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKL----EKAN--- 493
           +  LI   CK G+L  A   F ++     +P   T++ +++GL     +    +++N   
Sbjct: 625 YTILIGYFCKEGKLTKACFFFEQMLINKCIPNDATFNYLVNGLTNNNGIAISSKRSNSQP 684

Query: 494 ----DFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTF 548
               +F   M  +G    +  +N+++    Q+      ++L  KM    +   PD  +F
Sbjct: 685 NLTLEFFGMMISDGWDWRIAAYNSILLCLCQHKMVKPALQLHDKMM--SKGFPPDPVSF 741



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 99/401 (24%), Positives = 192/401 (47%), Gaps = 9/401 (2%)

Query: 134 KEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNI 193
           KE   L + M +  + P       +I+ +  +G +  AL L+  ++  D  N +    ++
Sbjct: 113 KEIENLLETMKSKELIPTCEALSFVISAYAGSGLVKEALELYNTVI--DVHNCV---PDV 167

Query: 194 FSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIE 253
           F+ + +++ L   G V+ A++++ EM  R  +        +  G C  G  EE   L  +
Sbjct: 168 FACNSLLNLLVHHGKVEIARKVYDEMVDRNGDVDNYTVCIVTKGLCKEGKVEEGRHLIEK 227

Query: 254 MLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGR 313
               G  PN++ +N +ID  CK G I  AN L + +  +G  P   TY ++++ +C  G+
Sbjct: 228 RWGKGCVPNIVFYNTLIDGYCKNGDIERANLLFKELKVKGFLPTVKTYGAMINAFCKKGK 287

Query: 314 IDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNT 373
            +   ++ + M  +G   ++  +N +I+   K     EA    R +I +G    + TYNT
Sbjct: 288 FEAVDKLLVEMKERGLAVSLQIFNGIIDARFKHGCEIEAADAVRWMIESGCEPDMATYNT 347

Query: 374 LLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNK 433
           L++G    G+   A++L +      + P+  +Y  LI    KN     A +L  ++EM++
Sbjct: 348 LINGSCSKGKVREAEELLEHAIRRGLFPNKFSYTPLIHAFSKNGEYVRASEL--LIEMSE 405

Query: 434 FEFGIEI--FNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEK 491
               +++  +  L+ GL  AG +D A  +  K+ ++G++P    Y++++ GLC+KG+   
Sbjct: 406 RGHTLDLIAYGALVHGLVVAGEVDVALTVRDKMMERGILPDANIYNVLMSGLCKKGRFPA 465

Query: 492 ANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLH 532
           A   L+ M      P+     TL+ GF+++    +  +L  
Sbjct: 466 AKQLLVEMLDQNVTPDAFVNATLVDGFIRHGNLDEAKKLFQ 506



 Score = 89.4 bits (220), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 76/289 (26%), Positives = 128/289 (44%), Gaps = 21/289 (7%)

Query: 125 RGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYE 184
           +G C    + +A   FK M      PD  TY T+I+G+ +  +L  ALR+   M+     
Sbjct: 525 KGYCKYGMMNDALLCFKRMFNGVHSPDEFTYSTIIDGYVKQNDLRGALRMFGLMLKK--- 581

Query: 185 NGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNW 244
                K N+ +++ +I+  C+ G +++A+++F EM+  G  P VV  T LI  FC  G  
Sbjct: 582 ---TCKPNVVTFTSLINGFCRNGDLNRAEKVFEEMRSFGFEPNVVTYTILIGYFCKEGKL 638

Query: 245 EEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKI--------NEANGLLE---LMIQRG 293
            +    F +ML     PN  TFN +++ L     I        ++ N  LE   +MI  G
Sbjct: 639 TKACFFFEQMLINKCIPNDATFNYLVNGLTNNNGIAISSKRSNSQPNLTLEFFGMMISDG 698

Query: 294 LNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAM 353
            +     YNS++   C    +  A ++   M SKG     VS+  L++G C    +++  
Sbjct: 699 WDWRIAAYNSILLCLCQHKMVKPALQLHDKMMSKGFPPDPVSFIALLHGLCLEGRLQDWN 758

Query: 354 SLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYA----QKLFDEMKLYN 398
           ++     +    Q  + Y+  L      G    A    Q L ++ K +N
Sbjct: 759 NVIPCNFNERQLQIAVKYSEKLDQFLSEGLTSDASLLLQTLVEKFKFHN 807



 Score = 43.9 bits (102), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 37/164 (22%), Positives = 70/164 (42%), Gaps = 14/164 (8%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           C++G  +LN A   F  M      P + ++ +L G   K         F+ +++    +P
Sbjct: 598 CRNG--DLNRAEKVFEEMRSFGFEPNVVTYTILIGYFCKEGKLTKACFFFEQMLINKCIP 655

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEAT-----WLFKNMIAFGVRPDVITYGTLINGFC 163
           +  T N L+N   N   G+ + ++   +        F  MI+ G    +  Y +++   C
Sbjct: 656 NDATFNYLVNGLTNN-NGIAISSKRSNSQPNLTLEFFGMMISDGWDWRIAAYNSILLCLC 714

Query: 164 RTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEG 207
           +   +  AL+LH KM+S  +        +  S+  ++  LC EG
Sbjct: 715 QHKMVKPALQLHDKMMSKGF------PPDPVSFIALLHGLCLEG 752


>gi|302142099|emb|CBI19302.3| unnamed protein product [Vitis vinifera]
          Length = 609

 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 110/334 (32%), Positives = 181/334 (54%), Gaps = 6/334 (1%)

Query: 163 CRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGR 222
           C+   +  A++L  +M +        SK ++ +Y+++I+ +CKEG +D+A +    M   
Sbjct: 93  CKESGVGQAMKLLDEMRNKG------SKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSY 146

Query: 223 GINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEA 282
           G  P V+    ++   C  G W +   L  +ML  G  P+++TFN++I+ LC+ G +  A
Sbjct: 147 GCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRA 206

Query: 283 NGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILING 342
             +LE M   G  P+  +YN L+ G+C   ++D A E    M S+GC   +V+YN L+  
Sbjct: 207 IDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTA 266

Query: 343 YCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPD 402
            CK   V+ A+ +  Q+ S G    +ITYNT++ GL + G+   A KL DEM+   ++PD
Sbjct: 267 LCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPD 326

Query: 403 LSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFH 462
           + TY+ L+ GL +   V EA+K FH LE          +N ++ GLCK+ + D A +   
Sbjct: 327 IITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLA 386

Query: 463 KLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFL 496
            +  K   PT  TY+I+I G+  +G  ++A D L
Sbjct: 387 YMISKRCKPTEATYTILIEGIAYEGLAKEALDLL 420



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 109/360 (30%), Positives = 187/360 (51%), Gaps = 2/360 (0%)

Query: 196 YSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEML 255
           +S  + + CKE  V +A +L  EM+ +G  P VV    LI+G C  G  +E       M 
Sbjct: 85  FSFYVQTTCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMP 144

Query: 256 DLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRID 315
             G +PN++T N+++  +C  G+  +A  LL  M+++G +P   T+N L++  C  G + 
Sbjct: 145 SYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLG 204

Query: 316 TAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLL 375
            A +I   M   GC    +SYN L++G+CK   ++ A+     ++S G    ++TYNTLL
Sbjct: 205 RAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLL 264

Query: 376 SGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFE 435
           + L + G+   A ++ +++      P L TYN +IDGL K    + A+KL   +     +
Sbjct: 265 TALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLK 324

Query: 436 FGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDF 495
             I  ++ L+ GL + G++D A + FH L   G+ P  +TY+ ++ GLC+  + ++A DF
Sbjct: 325 PDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDF 384

Query: 496 LLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLL 555
           L YM    C P   T+  L+ G        + ++LL+++    R LV   +   +   +L
Sbjct: 385 LAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELC--SRGLVKKSSAEQVAAPVL 442



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 107/343 (31%), Positives = 181/343 (52%), Gaps = 6/343 (1%)

Query: 128 CVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGL 187
           C E+ + +A  L   M   G +PDV+TY  LING C+ G L  A++    M S       
Sbjct: 93  CKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYG----- 147

Query: 188 ISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEV 247
             + N+ +++II+ S+C  G    A++L  +M  +G +P+VV    LI+  C  G     
Sbjct: 148 -CQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRA 206

Query: 248 NGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDG 307
             +  +M   G  PN L++N ++   CK  K++ A   L++M+ RG  PD  TYN+L+  
Sbjct: 207 IDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTA 266

Query: 308 YCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQT 367
            C  G++D A EI   + SKGC   +++YN +I+G  K+   E A+ L  ++   G++  
Sbjct: 267 LCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPD 326

Query: 368 VITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFH 427
           +ITY++L+SGL + G+   A K F +++   + P+  TYN ++ GLCK+     A+    
Sbjct: 327 IITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLA 386

Query: 428 MLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLV 470
            +   + +     +  LI+G+   G    A +L ++L  +GLV
Sbjct: 387 YMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRGLV 429



 Score =  171 bits (434), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 100/359 (27%), Positives = 180/359 (50%), Gaps = 13/359 (3%)

Query: 71  PSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVE 130
           P   +S F+       K       +    ++ + G  PD +T N+LIN       G+C E
Sbjct: 78  PCFSLSGFSFYVQTTCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLIN-------GICKE 130

Query: 131 NRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISK 190
            R+ EA     NM ++G +P+VIT+  ++   C TG    A +L   M+           
Sbjct: 131 GRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKG------CS 184

Query: 191 TNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGL 250
            ++ +++I+I+ LC++GL+ +A ++  +M   G  P  +    L+HGFC     +     
Sbjct: 185 PSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEY 244

Query: 251 FIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCL 310
              M+  G  P+++T+N ++  LCK GK++ A  +L  +  +G +P   TYN+++DG   
Sbjct: 245 LDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSK 304

Query: 311 VGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVIT 370
           VG+ + A ++   M  KG K  +++Y+ L++G  +   V+EA+  +  +   G+R   IT
Sbjct: 305 VGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAIT 364

Query: 371 YNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHML 429
           YN+++ GL ++ Q   A      M     +P  +TY ILI+G+      +EA+ L + L
Sbjct: 365 YNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNEL 423



 Score =  158 bits (399), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 84/283 (29%), Positives = 150/283 (53%)

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
           I    L P  +L  F+  +   CK   + +A  LL+ M  +G  PD  TYN L++G C  
Sbjct: 71  INQQTLFPCFSLSGFSFYVQTTCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKE 130

Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
           GR+D A +   +M S GC+  V+++NI++   C      +A  L   ++  G   +V+T+
Sbjct: 131 GRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTF 190

Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
           N L++ L + G  G A  + ++M ++   P+  +YN L+ G CK   +  A++   ++  
Sbjct: 191 NILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVS 250

Query: 432 NKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEK 491
                 I  +N L+  LCK G++D A E+ ++L  KG  P ++TY+ +I GL + GK E+
Sbjct: 251 RGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTER 310

Query: 492 ANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKM 534
           A   L  M + G  P+++T+++L+ G  +  K  + ++  H +
Sbjct: 311 AIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDL 353



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 104/352 (29%), Positives = 165/352 (46%), Gaps = 17/352 (4%)

Query: 44  FLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVS 103
           ++   CK     + +A      M +    P + ++N+L   + K    D  I F   + S
Sbjct: 88  YVQTTCKES--GVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPS 145

Query: 104 IGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFC 163
            G  P+ +T NI++       R +C   R  +A  L  +M+  G  P V+T+  LIN  C
Sbjct: 146 YGCQPNVITHNIIL-------RSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLC 198

Query: 164 RTGNLSVALRLHKKM-VSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGR 222
           R G L  A+ + +KM + G   N L       SY+ ++   CKE  +D+A E    M  R
Sbjct: 199 RQGLLGRAIDILEKMPMHGCTPNSL-------SYNPLLHGFCKEKKMDRAIEYLDIMVSR 251

Query: 223 GINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEA 282
           G  P +V   TL+   C  G  +    +  ++   G  P L+T+N +ID L K GK   A
Sbjct: 252 GCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERA 311

Query: 283 NGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILING 342
             LL+ M ++GL PD  TY+SL+ G    G++D A + F  +   G +   ++YN ++ G
Sbjct: 312 IKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLG 371

Query: 343 YCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEM 394
            CK    + A+     +IS   + T  TY  L+ G+   G A  A  L +E+
Sbjct: 372 LCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNEL 423



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 61/223 (27%), Positives = 105/223 (47%), Gaps = 13/223 (5%)

Query: 72  SPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVEN 131
           +P   S+N L     K +  D  I +   +VS G  PD +T N L+         LC + 
Sbjct: 219 TPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLT-------ALCKDG 271

Query: 132 RIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKT 191
           ++  A  +   + + G  P +ITY T+I+G  + G    A++L  +M       GL  K 
Sbjct: 272 KVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEM----RRKGL--KP 325

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
           +I +YS ++  L +EG VD+A + F +++G GI P  +   +++ G C +   +      
Sbjct: 326 DIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFL 385

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGL 294
             M+    +P   T+ ++I+ +   G   EA  LL  +  RGL
Sbjct: 386 AYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRGL 428


>gi|255577256|ref|XP_002529510.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223531026|gb|EEF32879.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 804

 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 141/506 (27%), Positives = 229/506 (45%), Gaps = 61/506 (12%)

Query: 76  SSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKE 135
            +F +L  A AK    +  +  +  +      PD  T N +++    KE  L        
Sbjct: 127 DAFTVLIQAYAKMDMIEKAVESFEMMKDFDCKPDVFTYNTVLHVMVRKEVVLL------- 179

Query: 136 ATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFS 195
           A  ++  M+     P++ T+  LI+G C++G    AL++  +M             N  +
Sbjct: 180 ALGIYNRMLKLNCLPNIATFSILIDGMCKSGKTQNALQMFDEMTQRRI------LPNKIT 233

Query: 196 YSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEE--------- 246
           Y+III  LC+    D A  LF+ MK  G  P  V    L+HGFC  G  +E         
Sbjct: 234 YTIIISGLCQAQKADVAYRLFIAMKDHGCIPDSVTYNALLHGFCKLGRVDEALGLLKYFE 293

Query: 247 --------------VNGLFI------------EMLDLGPRPNLLTFNVMIDCLCKGGKIN 280
                         ++GLF             +M +   +P+++ + +M+  L K GK  
Sbjct: 294 KDRYVLDKQGYSCLIDGLFRARRFEDAQVWYRKMTEHNIKPDVILYTIMMKGLSKAGKFK 353

Query: 281 EANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILI 340
           +A  LL  M +RGL PD   YN+L+ GYC +G +D A+ + L +    C  +  +Y ILI
Sbjct: 354 DALRLLNEMTERGLVPDTHCYNALIKGYCDLGLLDEAKSLHLEISKNDCFSSACTYTILI 413

Query: 341 NGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKL---- 396
            G C+   V +A  ++ ++  +G   +V+T+N L+ G  +AG    AQ LF +M++    
Sbjct: 414 CGMCRSGLVGDAQQIFNEMEKHGCYPSVVTFNALIDGFCKAGNIEKAQLLFYKMEIGRNP 473

Query: 397 ---------YNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDG 447
                     N   D ++   +++ LC +  + +A  +   L  + F   I  +N LI G
Sbjct: 474 SLFLRLSQGANRVLDTASLQTMVEQLCDSGLILKAYNILMQLTDSGFAPNIITYNILIHG 533

Query: 448 LCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPN 507
            CKAG ++ A++LF +L  KGL P  VTY  +I+GL    + E A   L  + KNGC P 
Sbjct: 534 FCKAGNINGAFKLFKELQLKGLSPDSVTYGTLINGLLSANREEDAFTVLDQILKNGCTPI 593

Query: 508 VVTFNTLMHGFLQNNKTSKVVELLHK 533
              + + M    + NK +    L  K
Sbjct: 594 TEVYKSFMTWSCRRNKITLAFSLWLK 619



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 142/514 (27%), Positives = 234/514 (45%), Gaps = 44/514 (8%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
           N  LH  CK G   ++EA     Y    +       ++ L   + + R ++    +YRK+
Sbjct: 270 NALLHGFCKLG--RVDEALGLLKYFEKDRYVLDKQGYSCLIDGLFRARRFEDAQVWYRKM 327

Query: 102 VSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLING 161
               + PD +   I++       +GL    + K+A  L   M   G+ PD   Y  LI G
Sbjct: 328 TEHNIKPDVILYTIMM-------KGLSKAGKFKDALRLLNEMTERGLVPDTHCYNALIKG 380

Query: 162 FCRTGNLSVALRLHKKMVSGDYENGLISKTNIFS----YSIIIDSLCKEGLVDKAKELFL 217
           +C  G L  A  LH +          ISK + FS    Y+I+I  +C+ GLV  A+++F 
Sbjct: 381 YCDLGLLDEAKSLHLE----------ISKNDCFSSACTYTILICGMCRSGLVGDAQQIFN 430

Query: 218 EMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLL------------- 264
           EM+  G  P+VV    LI GFC AGN E+   LF +M ++G  P+L              
Sbjct: 431 EMEKHGCYPSVVTFNALIDGFCKAGNIEKAQLLFYKM-EIGRNPSLFLRLSQGANRVLDT 489

Query: 265 -TFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLS 323
            +   M++ LC  G I +A  +L  +   G  P+  TYN L+ G+C  G I+ A ++F  
Sbjct: 490 ASLQTMVEQLCDSGLILKAYNILMQLTDSGFAPNIITYNILIHGFCKAGNINGAFKLFKE 549

Query: 324 MHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQ 383
           +  KG     V+Y  LING       E+A ++  QI+ NG       Y + ++   +  +
Sbjct: 550 LQLKGLSPDSVTYGTLINGLLSANREEDAFTVLDQILKNGCTPITEVYKSFMTWSCRRNK 609

Query: 384 AGYAQKLFDEMKLYNVEP--DLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIF 441
              A  L+  +K     P  D      + +   K   V+EAV+    ++    +F +  +
Sbjct: 610 ITLAFSLW--LKYLRSIPGRDSEVLKSVEENFEKGE-VEEAVRGLLEMDFKLNDFQLAPY 666

Query: 442 NCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEK 501
              + GLC+AGRL+ A ++F  L +  ++ T  +   +I+ L + G L+ A +  LY   
Sbjct: 667 TIWLIGLCQAGRLEEALKIFFTLEEHNVLVTPPSCVKLIYRLLKVGNLDLAAEIFLYTID 726

Query: 502 NGCAPNVVTFNTLMHGFLQN-NKTSKVVELLHKM 534
            G        N L+   L++ +K ++  +LL +M
Sbjct: 727 KGYMLMPRICNRLLKSLLRSEDKRNRAFDLLSRM 760



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 118/443 (26%), Positives = 202/443 (45%), Gaps = 87/443 (19%)

Query: 195 SYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEM 254
           +++++I +  K  +++KA E F  MK     P V    T++H            G++  M
Sbjct: 128 AFTVLIQAYAKMDMIEKAVESFEMMKDFDCKPDVFTYNTVLHVMVRKEVVLLALGIYNRM 187

Query: 255 LDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRI 314
           L L   PN+ TF+++ID +CK GK   A  + + M QR + P++ TY  ++ G C   + 
Sbjct: 188 LKLNCLPNIATFSILIDGMCKSGKTQNALQMFDEMTQRRILPNKITYTIIISGLCQAQKA 247

Query: 315 DTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSL------------------- 355
           D A  +F++M   GC    V+YN L++G+CK+  V+EA+ L                   
Sbjct: 248 DVAYRLFIAMKDHGCIPDSVTYNALLHGFCKLGRVDEALGLLKYFEKDRYVLDKQGYSCL 307

Query: 356 ----------------YRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNV 399
                           YR++  + ++  VI Y  ++ GL +AG+   A +L +EM    +
Sbjct: 308 IDGLFRARRFEDAQVWYRKMTEHNIKPDVILYTIMMKGLSKAGKFKDALRLLNEMTERGL 367

Query: 400 EPDLSTYNILIDGLC----------------KNNC-------------------VQEAVK 424
            PD   YN LI G C                KN+C                   V +A +
Sbjct: 368 VPDTHCYNALIKGYCDLGLLDEAKSLHLEISKNDCFSSACTYTILICGMCRSGLVGDAQQ 427

Query: 425 LFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTV----------- 473
           +F+ +E +     +  FN LIDG CKAG ++ A  LF+K+ + G  P++           
Sbjct: 428 IFNEMEKHGCYPSVVTFNALIDGFCKAGNIEKAQLLFYKM-EIGRNPSLFLRLSQGANRV 486

Query: 474 ---VTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVEL 530
               +   M+  LC  G + KA + L+ +  +G APN++T+N L+HGF +    +   +L
Sbjct: 487 LDTASLQTMVEQLCDSGLILKAYNILMQLTDSGFAPNIITYNILIHGFCKAGNINGAFKL 546

Query: 531 LHKMAEPERNLVPDDTTFSIVVD 553
             ++    + L PD  T+  +++
Sbjct: 547 FKELQ--LKGLSPDSVTYGTLIN 567



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 136/543 (25%), Positives = 228/543 (41%), Gaps = 97/543 (17%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
           N  LH   +  ++ L  A   +  M  +   P I++F++L   + K+      +  + ++
Sbjct: 165 NTVLHVMVRKEVVLL--ALGIYNRMLKLNCLPNIATFSILIDGMCKSGKTQNALQMFDEM 222

Query: 102 VSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLING 161
               +LP+ +T  I+I+       GLC   +   A  LF  M   G  PD +TY  L++G
Sbjct: 223 TQRRILPNKITYTIIIS-------GLCQAQKADVAYRLFIAMKDHGCIPDSVTYNALLHG 275

Query: 162 FCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKG 221
           FC+ G +  AL L K      Y   ++ K     YS +ID L +    + A+  + +M  
Sbjct: 276 FCKLGRVDEALGLLKYFEKDRY---VLDKQ---GYSCLIDGLFRARRFEDAQVWYRKMTE 329

Query: 222 RGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINE 281
             I P V++ T ++ G   AG +++   L  EM + G  P+   +N +I   C  G ++E
Sbjct: 330 HNIKPDVILYTIMMKGLSKAGKFKDALRLLNEMTERGLVPDTHCYNALIKGYCDLGLLDE 389

Query: 282 ANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILIN 341
           A  L   + +        TY  L+ G C  G +  A++IF  M   GC  +VV++N LI+
Sbjct: 390 AKSLHLEISKNDCFSSACTYTILICGMCRSGLVGDAQQIFNEMEKHGCYPSVVTFNALID 449

Query: 342 GYCKILNVEEAMSLY--------------------------------------------- 356
           G+CK  N+E+A  L+                                             
Sbjct: 450 GFCKAGNIEKAQLLFYKMEIGRNPSLFLRLSQGANRVLDTASLQTMVEQLCDSGLILKAY 509

Query: 357 ---RQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGL 413
               Q+  +G    +ITYN L+ G  +AG    A KLF E++L  + PD  TY  LI+GL
Sbjct: 510 NILMQLTDSGFAPNIITYNILIHGFCKAGNINGAFKLFKELQLKGLSPDSVTYGTLINGL 569

Query: 414 CKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHK----LP---- 465
              N  ++A  +   +  N      E++   +   C+  ++  A+ L+ K    +P    
Sbjct: 570 LSANREEDAFTVLDQILKNGCTPITEVYKSFMTWSCRRNKITLAFSLWLKYLRSIPGRDS 629

Query: 466 ----------QKGLVPTVVT----------------YSIMIHGLCRKGKLEKANDFLLYM 499
                     +KG V   V                 Y+I + GLC+ G+LE+A      +
Sbjct: 630 EVLKSVEENFEKGEVEEAVRGLLEMDFKLNDFQLAPYTIWLIGLCQAGRLEEALKIFFTL 689

Query: 500 EKN 502
           E++
Sbjct: 690 EEH 692



 Score =  112 bits (281), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 85/323 (26%), Positives = 150/323 (46%), Gaps = 8/323 (2%)

Query: 264 LTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLS 323
           ++ N++ID L K         +L+ + + G +     +  L+  Y  +  I+ A E F  
Sbjct: 92  VSHNMIIDMLIKDNGFELYWQVLKEIKRCGFSISADAFTVLIQAYAKMDMIEKAVESFEM 151

Query: 324 MHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQ 383
           M    CK  V +YN +++   +   V  A+ +Y +++       + T++ L+ G+ ++G+
Sbjct: 152 MKDFDCKPDVFTYNTVLHVMVRKEVVLLALGIYNRMLKLNCLPNIATFSILIDGMCKSGK 211

Query: 384 AGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNC 443
              A ++FDEM    + P+  TY I+I GLC+      A +LF  ++ +        +N 
Sbjct: 212 TQNALQMFDEMTQRRILPNKITYTIIISGLCQAQKADVAYRLFIAMKDHGCIPDSVTYNA 271

Query: 444 LIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNG 503
           L+ G CK GR+D A  L     +   V     YS +I GL R  + E A  +   M ++ 
Sbjct: 272 LLHGFCKLGRVDEALGLLKYFEKDRYVLDKQGYSCLIDGLFRARRFEDAQVWYRKMTEHN 331

Query: 504 CAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVV----DLLAKDE 559
             P+V+ +  +M G  +  K    + LL++M   ER LVPD   ++ ++    DL   DE
Sbjct: 332 IKPDVILYTIMMKGLSKAGKFKDALRLLNEMT--ERGLVPDTHCYNALIKGYCDLGLLDE 389

Query: 560 KYHECSAVSKSS--YRACLYVTI 580
                  +SK+     AC Y  +
Sbjct: 390 AKSLHLEISKNDCFSSACTYTIL 412


>gi|293333312|ref|NP_001168014.1| uncharacterized protein LOC100381738 [Zea mays]
 gi|223945505|gb|ACN26836.1| unknown [Zea mays]
          Length = 462

 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 131/456 (28%), Positives = 221/456 (48%), Gaps = 27/456 (5%)

Query: 108 PDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGN 167
           PD  T N ++       +GLC   + ++A  L + MI     P+ +T+ T I  FC+ G 
Sbjct: 5   PDTYTYNTVL-------KGLCCAKQWEQAEELMREMIRNSCHPNEVTFATQIRAFCQNGL 57

Query: 168 LSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPA 227
           L  A+ L ++M             ++  YS +++   + G VD+A +L   M  R   P 
Sbjct: 58  LDRAVELLEQMPKYG------CTPDVIIYSTLVNGFSEHGRVDEALKLLNTMLCR---PN 108

Query: 228 VVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLE 287
            V     + G C AG WEEV  L  EM+     PN  TF+ +I+ LC+   +  A  +LE
Sbjct: 109 TVCYNAALKGLCIAGRWEEVGELIAEMVRKDCPPNDATFSTLINSLCQNRLVEYAVEVLE 168

Query: 288 LMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKIL 347
            M + G  PD  +YN+++  +    R D A ++  SM    CK   +S+N ++   CK  
Sbjct: 169 QMQKYGYMPDVVSYNTIISCFSDQARADDALKLLKSML---CKPDTISFNAVLKCLCKAK 225

Query: 348 NVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYN 407
              +A+ L  +++    R   +T+N L+  L Q GQ   A ++F+ M  Y   PD+ TY+
Sbjct: 226 RWYDAVELVAKMLKKDCRINEMTFNILIDSLCQNGQVKDAIEVFELMPKYRCMPDIVTYS 285

Query: 408 ILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQK 467
            LI+G  +    + A  LF  +      F    +N  + GLC A R D+A EL   +  +
Sbjct: 286 SLINGFSEQGLDEMAFDLFRSMPCRADIFS---YNATLKGLCMAARWDDAGELIADMVTE 342

Query: 468 GLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKV 527
             +P  VT++I+I  LC+KG + +A D    M K G  P++ T+N L++G+ +  +    
Sbjct: 343 DCLPNEVTFNILISSLCQKGLVNRAIDVYEQMPKYGITPDIFTYNALINGYSEQGRLDDA 402

Query: 528 VELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
           ++ L  M        PD  +++ ++  L + E++ +
Sbjct: 403 LKFLSTMP-----CEPDTISYNSILKGLCRAERWKD 433



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 134/480 (27%), Positives = 227/480 (47%), Gaps = 46/480 (9%)

Query: 69  MQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLC 128
           M  +P   ++N +   +   + ++      R+++     P+ +T       F  + R  C
Sbjct: 1   MPVAPDTYTYNTVLKGLCCAKQWEQAEELMREMIRNSCHPNEVT-------FATQIRAFC 53

Query: 129 VENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKM---------- 178
               +  A  L + M  +G  PDVI Y TL+NGF   G +  AL+L   M          
Sbjct: 54  QNGLLDRAVELLEQMPKYGCTPDVIIYSTLVNGFSEHGRVDEALKLLNTMLCRPNTVCYN 113

Query: 179 -------VSGDYEN--GLISK-------TNIFSYSIIIDSLCKEGLVDKAKELFLEMKGR 222
                  ++G +E    LI++        N  ++S +I+SLC+  LV+ A E+  +M+  
Sbjct: 114 AALKGLCIAGRWEEVGELIAEMVRKDCPPNDATFSTLINSLCQNRLVEYAVEVLEQMQKY 173

Query: 223 GINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEA 282
           G  P VV   T+I  F      ++   L   ML    +P+ ++FN ++ CLCK  +  +A
Sbjct: 174 GYMPDVVSYNTIISCFSDQARADDALKLLKSML---CKPDTISFNAVLKCLCKAKRWYDA 230

Query: 283 NGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILING 342
             L+  M+++    +  T+N L+D  C  G++  A E+F  M    C   +V+Y+ LING
Sbjct: 231 VELVAKMLKKDCRINEMTFNILIDSLCQNGQVKDAIEVFELMPKYRCMPDIVTYSSLING 290

Query: 343 YCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPD 402
           + +    E A  L+R   S   R  + +YN  L GL  A +   A +L  +M   +  P+
Sbjct: 291 FSEQGLDEMAFDLFR---SMPCRADIFSYNATLKGLCMAARWDDAGELIADMVTEDCLPN 347

Query: 403 LSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIF--NCLIDGLCKAGRLDNAWEL 460
             T+NILI  LC+   V  A+ ++   +M K+    +IF  N LI+G  + GRLD+A + 
Sbjct: 348 EVTFNILISSLCQKGLVNRAIDVYE--QMPKYGITPDIFTYNALINGYSEQGRLDDALKF 405

Query: 461 FHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQ 520
              +P +   P  ++Y+ ++ GLCR  + + A   +  M +  C PN VTF      F++
Sbjct: 406 LSTMPCE---PDTISYNSILKGLCRAERWKDAEKLVTEMLRKNCTPNEVTFKYANQLFIK 462



 Score =  151 bits (382), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 90/311 (28%), Positives = 152/311 (48%), Gaps = 6/311 (1%)

Query: 224 INPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEAN 283
           + P      T++ G CCA  WE+   L  EM+     PN +TF   I   C+ G ++ A 
Sbjct: 3   VAPDTYTYNTVLKGLCCAKQWEQAEELMREMIRNSCHPNEVTFATQIRAFCQNGLLDRAV 62

Query: 284 GLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGY 343
            LLE M + G  PD   Y++L++G+   GR+D A ++  +M    C+   V YN  + G 
Sbjct: 63  ELLEQMPKYGCTPDVIIYSTLVNGFSEHGRVDEALKLLNTML---CRPNTVCYNAALKGL 119

Query: 344 CKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDL 403
           C     EE   L  +++         T++TL++ L Q     YA ++ ++M+ Y   PD+
Sbjct: 120 CIAGRWEEVGELIAEMVRKDCPPNDATFSTLINSLCQNRLVEYAVEVLEQMQKYGYMPDV 179

Query: 404 STYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHK 463
            +YN +I          +A+KL   +           FN ++  LCKA R  +A EL  K
Sbjct: 180 VSYNTIISCFSDQARADDALKLLKSMLCKPDTIS---FNAVLKCLCKAKRWYDAVELVAK 236

Query: 464 LPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNK 523
           + +K      +T++I+I  LC+ G+++ A +    M K  C P++VT+++L++GF +   
Sbjct: 237 MLKKDCRINEMTFNILIDSLCQNGQVKDAIEVFELMPKYRCMPDIVTYSSLINGFSEQGL 296

Query: 524 TSKVVELLHKM 534
                +L   M
Sbjct: 297 DEMAFDLFRSM 307


>gi|414881814|tpg|DAA58945.1| TPA: hypothetical protein ZEAMMB73_003881 [Zea mays]
          Length = 792

 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 136/508 (26%), Positives = 242/508 (47%), Gaps = 18/508 (3%)

Query: 44  FLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVS 103
            +H  C  G   + +A   F  +     +P   ++ +L          D      R+++ 
Sbjct: 297 LMHGYCLHG--EVGKALDLFDEVVSDGVTPTNVTYGVLIKGCDAEGMSDETYKLCRQMIE 354

Query: 104 IGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFC 163
            GLL      N++I       +GL  + R K+A  L + ++  GV PDV TYG LI+  C
Sbjct: 355 QGLLLSTYEFNLVI-------KGLLRDKRWKDAIGLLELVVDTGV-PDVFTYGCLIHWLC 406

Query: 164 RTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRG 223
           +   L  A+ L  KM     E G+  K +I +Y  ++   C++G +D+A +L+ EM  +G
Sbjct: 407 KHQKLHEAVNLWDKM----KEAGV--KPSIVTYHSLLLGYCEKGRMDEALKLYSEMPDKG 460

Query: 224 INPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEAN 283
             P  V  TTL+ G+     ++    L  EM   G      T+N++I+ L    ++ E +
Sbjct: 461 FPPNEVTYTTLMKGYIKKKAFDNAYALLNEMRQNGVSCGDYTYNILINGLYMVNRVCEVD 520

Query: 284 GLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGY 343
            +L+  +  G  P   TYNS+++G+   G + +A  ++  M  KG    +V+Y   I+GY
Sbjct: 521 EMLKRFLSEGFVPTTMTYNSIINGFVKAGMMGSAFGMYRQMRKKGITPNIVTYTSFIDGY 580

Query: 344 CKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDL 403
           C+    + A+ L   +  +G++  +  YN  +    + G    A      +    + PD+
Sbjct: 581 CRTNCCDLAVKLLIYVRRDGIQPDIAAYNAFIDTFCKQGNMSRALHFLVLLLKDGLTPDV 640

Query: 404 STYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHK 463
           + YN  + G      + EA K ++ +   +     EI+  LIDG  K G +  A EL+ +
Sbjct: 641 TVYNSFVTGYKNLKMMAEASKFYYSMIKQRVVADTEIYTTLIDGFSKVGNVAFALELYSE 700

Query: 464 LPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNK 523
           +    ++P   T++ + HGLCR G ++ A   L  M +   +PN+VT+N L++  +++ K
Sbjct: 701 MMANHVIPDDKTFTALTHGLCRSGDIDGAKRLLDDMRRLDVSPNIVTYNMLINACVRDGK 760

Query: 524 TSKVVELLHKMAEPERNLVPDDTTFSIV 551
             +  +L  +M      +VPDDTT+ I+
Sbjct: 761 LQEAFQLHDEMLSS--GVVPDDTTYDIL 786



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 130/463 (28%), Positives = 222/463 (47%), Gaps = 16/463 (3%)

Query: 90  HYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVR 149
           H DAV   + ++   G+ PD     I I+       GLC       A  +   M   G  
Sbjct: 201 HCDAV-RLFDEMAGAGVKPDERVYAITIS-------GLCKLRDADRALQVLGKMREAGFE 252

Query: 150 PDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLV 209
           P  +TY ++++   + G +  ALRL  +M+    +     K ++   ++++   C  G V
Sbjct: 253 PWELTYSSVVDVLVKVGRMDEALRLKDQMLLATGK-----KMDVVLATMLMHGYCLHGEV 307

Query: 210 DKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVM 269
            KA +LF E+   G+ P  V    LI G    G  +E   L  +M++ G   +   FN++
Sbjct: 308 GKALDLFDEVVSDGVTPTNVTYGVLIKGCDAEGMSDETYKLCRQMIEQGLLLSTYEFNLV 367

Query: 270 IDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGC 329
           I  L +  +  +A GLLEL++  G+ PD FTY  L+   C   ++  A  ++  M   G 
Sbjct: 368 IKGLLRDKRWKDAIGLLELVVDTGV-PDVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAGV 426

Query: 330 KHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQK 389
           K ++V+Y+ L+ GYC+   ++EA+ LY ++   G     +TY TL+ G  +      A  
Sbjct: 427 KPSIVTYHSLLLGYCEKGRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAYA 486

Query: 390 LFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLC 449
           L +EM+   V     TYNILI+GL   N V E  ++        F      +N +I+G  
Sbjct: 487 LLNEMRQNGVSCGDYTYNILINGLYMVNRVCEVDEMLKRFLSEGFVPTTMTYNSIINGFV 546

Query: 450 KAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVV 509
           KAG + +A+ ++ ++ +KG+ P +VTY+  I G CR    + A   L+Y+ ++G  P++ 
Sbjct: 547 KAGMMGSAFGMYRQMRKKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYVRRDGIQPDIA 606

Query: 510 TFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVV 552
            +N  +  F +    S+ +  L  + +    L PD T ++  V
Sbjct: 607 AYNAFIDTFCKQGNMSRALHFLVLLLKD--GLTPDVTVYNSFV 647



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 119/420 (28%), Positives = 202/420 (48%), Gaps = 12/420 (2%)

Query: 140 FKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMV-SGDYENGLISKTNIFSYSI 198
           +  M+  GV PD  +   L+    R  + + AL L  +M   G Y +  +       Y +
Sbjct: 138 YSRMVTRGVVPDAKSRTDLLVTTARGASAADALTLFDEMRGKGCYADAKM-------YDV 190

Query: 199 IIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLG 258
           +I +  + G+   A  LF EM G G+ P   V    I G C   + +    +  +M + G
Sbjct: 191 VIRACVRGGMHCDAVRLFDEMAGAGVKPDERVYAITISGLCKLRDADRALQVLGKMREAG 250

Query: 259 PRPNLLTFNVMIDCLCKGGKINEANGLL-ELMIQRGLNPDRFTYNSLMDGYCLVGRIDTA 317
             P  LT++ ++D L K G+++EA  L  ++++  G   D      LM GYCL G +  A
Sbjct: 251 FEPWELTYSSVVDVLVKVGRMDEALRLKDQMLLATGKKMDVVLATMLMHGYCLHGEVGKA 310

Query: 318 REIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSG 377
            ++F  + S G   T V+Y +LI G       +E   L RQ+I  G+  +   +N ++ G
Sbjct: 311 LDLFDEVVSDGVTPTNVTYGVLIKGCDAEGMSDETYKLCRQMIEQGLLLSTYEFNLVIKG 370

Query: 378 LFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFG 437
           L +  +   A  L  E+ +    PD+ TY  LI  LCK+  + EAV L+  ++    +  
Sbjct: 371 LLRDKRWKDAIGLL-ELVVDTGVPDVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPS 429

Query: 438 IEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLL 497
           I  ++ L+ G C+ GR+D A +L+ ++P KG  P  VTY+ ++ G  +K   + A   L 
Sbjct: 430 IVTYHSLLLGYCEKGRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAYALLN 489

Query: 498 YMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAK 557
            M +NG +    T+N L++G    N+  +V E+L +        VP   T++ +++   K
Sbjct: 490 EMRQNGVSCGDYTYNILINGLYMVNRVCEVDEMLKRFL--SEGFVPTTMTYNSIINGFVK 547



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 61/245 (24%), Positives = 113/245 (46%), Gaps = 3/245 (1%)

Query: 321 FLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQ 380
           +  M ++G      S   L+    +  +  +A++L+ ++   G       Y+ ++    +
Sbjct: 138 YSRMVTRGVVPDAKSRTDLLVTTARGASAADALTLFDEMRGKGCYADAKMYDVVIRACVR 197

Query: 381 AGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEI 440
            G    A +LFDEM    V+PD   Y I I GLCK      A+++   +    FE     
Sbjct: 198 GGMHCDAVRLFDEMAGAGVKPDERVYAITISGLCKLRDADRALQVLGKMREAGFEPWELT 257

Query: 441 FNCLIDGLCKAGRLDNAWELFHK-LPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYM 499
           ++ ++D L K GR+D A  L  + L   G    VV  ++++HG C  G++ KA D    +
Sbjct: 258 YSSVVDVLVKVGRMDEALRLKDQMLLATGKKMDVVLATMLMHGYCLHGEVGKALDLFDEV 317

Query: 500 EKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDE 559
             +G  P  VT+  L+ G      + +  +L  +M   E+ L+     F++V+  L +D+
Sbjct: 318 VSDGVTPTNVTYGVLIKGCDAEGMSDETYKLCRQMI--EQGLLLSTYEFNLVIKGLLRDK 375

Query: 560 KYHEC 564
           ++ + 
Sbjct: 376 RWKDA 380



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 52/223 (23%), Positives = 100/223 (44%), Gaps = 14/223 (6%)

Query: 356 YRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCK 415
           Y ++++ GV     +   LL    +   A  A  LFDEM+      D   Y+++I    +
Sbjct: 138 YSRMVTRGVVPDAKSRTDLLVTTARGASAADALTLFDEMRGKGCYADAKMYDVVIRACVR 197

Query: 416 NNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVT 475
                +AV+LF  +     +    ++   I GLCK    D A ++  K+ + G  P  +T
Sbjct: 198 GGMHCDAVRLFDEMAGAGVKPDERVYAITISGLCKLRDADRALQVLGKMREAGFEPWELT 257

Query: 476 YSIMIHGLCRKGKLEKA---NDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLH 532
           YS ++  L + G++++A    D +L     G   +VV    LMHG+  + +  K ++L  
Sbjct: 258 YSSVVDVLVKVGRMDEALRLKDQMLL--ATGKKMDVVLATMLMHGYCLHGEVGKALDLFD 315

Query: 533 KMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKSSYRAC 575
           ++      + P + T+ +++       K  +   +S  +Y+ C
Sbjct: 316 EVVSD--GVTPTNVTYGVLI-------KGCDAEGMSDETYKLC 349


>gi|356499079|ref|XP_003518371.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680-like [Glycine max]
          Length = 615

 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 118/371 (31%), Positives = 205/371 (55%), Gaps = 5/371 (1%)

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
            I+ +++++   CK G V  A+ +F E+  RG+ P VV   TLI G C +G+ EE   L 
Sbjct: 247 KIYFFNVLMHGFCKAGDVGNARLVFDEIPKRGLRPTVVSFNTLISGCCKSGDVEEGFRLK 306

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
             M   G  P++ TF+ +I+ LCK G+++E + L + M  RGL P+  T+ +L+DG C  
Sbjct: 307 GVMESEGVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGRGLVPNGVTFTTLIDGQCKG 366

Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
           G++D A + F  M ++G +  +V+YN LING CK+ +++EA  L  ++ ++G++   IT+
Sbjct: 367 GKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMTASGLKPDKITF 426

Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
            TL+ G  + G    A ++   M    +E D   +  LI GLC+   V +A ++   +  
Sbjct: 427 TTLIDGCCKDGDMESALEIKRRMVEEGIELDDVAFTALISGLCREGRVHDAGRMLTDMLS 486

Query: 432 NKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEK 491
             F+     +  +ID  CK G +   ++L  ++   G VP VVTY+ +++GLC++G+++ 
Sbjct: 487 AGFKPDDPTYTMVIDCFCKKGDVKMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQGQMKN 546

Query: 492 ANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIV 551
           A   L  M   G APN +T+N L+ G  ++  +  V      +   E+ LV D  +++ +
Sbjct: 547 AKMLLDAMLNVGVAPNDITYNILLDGHSKHGSSVDV-----DIFNSEKGLVTDYASYTAL 601

Query: 552 VDLLAKDEKYH 562
           V+  +K  K H
Sbjct: 602 VNESSKTSKDH 612



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 132/449 (29%), Positives = 233/449 (51%), Gaps = 30/449 (6%)

Query: 91  YDAVISFYRKLVSIGLLPDFLTLNILI--NCFGNKERGLCVENRIK----------EATW 138
           +DA+IS Y   V  G  PD +    L+  N F    RG   EN ++          E +W
Sbjct: 179 FDALISAY---VDSGFTPDAVQCFRLVTKNKFPVPIRG--CENLLRRVVRLRPVEIERSW 233

Query: 139 -LFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYS 197
            L+  ++  G  P +  +  L++GFC+ G++  A  +  ++     + GL  +  + S++
Sbjct: 234 ALYLEVLDSGYPPKIYFFNVLMHGFCKAGDVGNARLVFDEIP----KRGL--RPTVVSFN 287

Query: 198 IIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDL 257
            +I   CK G V++   L   M+  G+ P V   + LI+G C  G  +E + LF EM   
Sbjct: 288 TLISGCCKSGDVEEGFRLKGVMESEGVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGR 347

Query: 258 GPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTA 317
           G  PN +TF  +ID  CKGGK++ A    ++M+ +G+ PD  TYN+L++G C VG +  A
Sbjct: 348 GLVPNGVTFTTLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEA 407

Query: 318 REIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSG 377
           R +   M + G K   +++  LI+G CK  ++E A+ + R+++  G+    + +  L+SG
Sbjct: 408 RRLVNEMTASGLKPDKITFTTLIDGCCKDGDMESALEIKRRMVEEGIELDDVAFTALISG 467

Query: 378 LFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFG 437
           L + G+   A ++  +M     +PD  TY ++ID  CK   V+   KL   ++ +    G
Sbjct: 468 LCREGRVHDAGRMLTDMLSAGFKPDDPTYTMVIDCFCKKGDVKMGFKLLKEMQSDGHVPG 527

Query: 438 IEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLL 497
           +  +N L++GLCK G++ NA  L   +   G+ P  +TY+I++ G  + G    + D  +
Sbjct: 528 VVTYNALMNGLCKQGQMKNAKMLLDAMLNVGVAPNDITYNILLDGHSKHG---SSVDVDI 584

Query: 498 YMEKNGCAPNVVTFNTLMHGFLQNNKTSK 526
           +  + G   +  ++  L++   +++KTSK
Sbjct: 585 FNSEKGLVTDYASYTALVN---ESSKTSK 610



 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 109/345 (31%), Positives = 186/345 (53%), Gaps = 2/345 (0%)

Query: 209 VDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNV 268
           ++++  L+LE+   G  P +     L+HGFC AG+      +F E+   G RP +++FN 
Sbjct: 229 IERSWALYLEVLDSGYPPKIYFFNVLMHGFCKAGDVGNARLVFDEIPKRGLRPTVVSFNT 288

Query: 269 MIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKG 328
           +I   CK G + E   L  +M   G+ PD FT+++L++G C  GR+D    +F  M  +G
Sbjct: 289 LISGCCKSGDVEEGFRLKGVMESEGVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGRG 348

Query: 329 CKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQ 388
                V++  LI+G CK   V+ A+  ++ +++ GVR  ++TYN L++GL + G    A+
Sbjct: 349 LVPNGVTFTTLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEAR 408

Query: 389 KLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGL 448
           +L +EM    ++PD  T+  LIDG CK+  ++ A+++   +     E     F  LI GL
Sbjct: 409 RLVNEMTASGLKPDKITFTTLIDGCCKDGDMESALEIKRRMVEEGIELDDVAFTALISGL 468

Query: 449 CKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNV 508
           C+ GR+ +A  +   +   G  P   TY+++I   C+KG ++     L  M+ +G  P V
Sbjct: 469 CREGRVHDAGRMLTDMLSAGFKPDDPTYTMVIDCFCKKGDVKMGFKLLKEMQSDGHVPGV 528

Query: 509 VTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
           VT+N LM+G  +  +      LL  M      + P+D T++I++D
Sbjct: 529 VTYNALMNGLCKQGQMKNAKMLLDAML--NVGVAPNDITYNILLD 571



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 111/371 (29%), Positives = 182/371 (49%), Gaps = 18/371 (4%)

Query: 41  LNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRK 100
            N  +H  CK+G  ++  AR  F  +      P + SFN L     K+   +        
Sbjct: 251 FNVLMHGFCKAG--DVGNARLVFDEIPKRGLRPTVVSFNTLISGCCKSGDVEEGFRLKGV 308

Query: 101 LVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLIN 160
           + S G+ PD  T + LIN       GLC E R+ E + LF  M   G+ P+ +T+ TLI+
Sbjct: 309 MESEGVCPDVFTFSALIN-------GLCKEGRLDEGSLLFDEMCGRGLVPNGVTFTTLID 361

Query: 161 GFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMK 220
           G C+ G + +AL+  + M++     G+  + ++ +Y+ +I+ LCK G + +A+ L  EM 
Sbjct: 362 GQCKGGKVDLALKNFQMMLA----QGV--RPDLVTYNALINGLCKVGDLKEARRLVNEMT 415

Query: 221 GRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKIN 280
             G+ P  +  TTLI G C  G+ E    +   M++ G   + + F  +I  LC+ G+++
Sbjct: 416 ASGLKPDKITFTTLIDGCCKDGDMESALEIKRRMVEEGIELDDVAFTALISGLCREGRVH 475

Query: 281 EANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILI 340
           +A  +L  M+  G  PD  TY  ++D +C  G +    ++   M S G    VV+YN L+
Sbjct: 476 DAGRMLTDMLSAGFKPDDPTYTMVIDCFCKKGDVKMGFKLLKEMQSDGHVPGVVTYNALM 535

Query: 341 NGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVE 400
           NG CK   ++ A  L   +++ GV    ITYN LL G  + G +        E  L    
Sbjct: 536 NGLCKQGQMKNAKMLLDAMLNVGVAPNDITYNILLDGHSKHGSSVDVDIFNSEKGLVT-- 593

Query: 401 PDLSTYNILID 411
            D ++Y  L++
Sbjct: 594 -DYASYTALVN 603



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 68/214 (31%), Positives = 118/214 (55%), Gaps = 2/214 (0%)

Query: 345 KILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLS 404
           + + +E + +LY +++ +G    +  +N L+ G  +AG  G A+ +FDE+    + P + 
Sbjct: 225 RPVEIERSWALYLEVLDSGYPPKIYFFNVLMHGFCKAGDVGNARLVFDEIPKRGLRPTVV 284

Query: 405 TYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKL 464
           ++N LI G CK+  V+E  +L  ++E       +  F+ LI+GLCK GRLD    LF ++
Sbjct: 285 SFNTLISGCCKSGDVEEGFRLKGVMESEGVCPDVFTFSALINGLCKEGRLDEGSLLFDEM 344

Query: 465 PQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKT 524
             +GLVP  VT++ +I G C+ GK++ A      M   G  P++VT+N L++G  +    
Sbjct: 345 CGRGLVPNGVTFTTLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDL 404

Query: 525 SKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKD 558
            +   L+++M      L PD  TF+ ++D   KD
Sbjct: 405 KEARRLVNEMT--ASGLKPDKITFTTLIDGCCKD 436


>gi|414887654|tpg|DAA63668.1| TPA: hypothetical protein ZEAMMB73_339081 [Zea mays]
          Length = 1098

 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 142/481 (29%), Positives = 238/481 (49%), Gaps = 28/481 (5%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
           N  L   C  G  ++++A   +  M     +P   S + L     K+   +  ++ +++ 
Sbjct: 458 NALLKGFCSLG--SIDDALRLWFLMLKKGIAPNEISCSTLLDGFFKSGKTEKALNLWKET 515

Query: 102 VSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLING 161
           ++ GL  +  T N +IN       GLC   R+ EA  L   M  +   PD+ITY TL +G
Sbjct: 516 LARGLAKNTTTFNTVIN-------GLCKIERMPEAEELVDKMKQWRCPPDIITYRTLFSG 568

Query: 162 FCRTGNLSVALRLHKKMVSGDYEN-GLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMK 220
           +C+ G++  A R+  ++     EN G       F+  I    + K+    K  ++  EM 
Sbjct: 569 YCKIGDMDRASRILNEL-----ENLGFAPTIEFFNSLITGHFIAKQH--GKVNDILFEMS 621

Query: 221 GRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKIN 280
            RG++P  V    LI G+C  G+      L++EM++ G  PNL   + ++ C  + GK +
Sbjct: 622 NRGLSPNTVAYGALIAGWCKEGDLHTAYNLYLEMIEKGLVPNLFICSSLVSCFYRKGKFD 681

Query: 281 EANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTV-VSYNIL 339
           EAN +L+ ++   + PD      +      +G++      F+   + G  H+  + +NI+
Sbjct: 682 EANLVLQNLVGTDMIPD------ISAPRLEIGKVAN----FIDTVAGGNHHSAKIMWNIV 731

Query: 340 INGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNV 399
           I G CK+  +E+A +L   +   G      TY++L+ G   +G    A  L D M    +
Sbjct: 732 IFGLCKLGRIEDAKNLLADLKDKGFVADNFTYSSLIHGCSASGFVDVAFDLRDTMLSVGL 791

Query: 400 EPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWE 459
            P++ TYN LI GLCK+  +  AV LF  L           +N LID  CK G +  A++
Sbjct: 792 TPNIVTYNSLIYGLCKSGELSRAVSLFKKLWTKGISPNAITYNTLIDKHCKDGYITEAFK 851

Query: 460 LFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFL 519
           L  ++ ++G+ PTV TYSI+I+GLC +G +E+A   L  M +N   PN VT+ TL+ G++
Sbjct: 852 LKQRMIEEGIHPTVFTYSILINGLCTQGYMEEAIKLLDQMIENNVDPNYVTYWTLIQGYV 911

Query: 520 Q 520
           +
Sbjct: 912 R 912



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 147/541 (27%), Positives = 246/541 (45%), Gaps = 82/541 (15%)

Query: 81  LFGAVAKN-----RHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKE 135
           +FGAV        R  DA      ++V   L  +    NI+IN       G C   R+ E
Sbjct: 351 VFGAVINGYCQMGRMEDAA-RLLNEMVDSRLQVNLFVYNIMIN-------GYCKLGRMVE 402

Query: 136 ATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFS 195
           A  +   M   GVRPD  +Y +L++G+C+ G ++ A   +  M+     NG  + T   +
Sbjct: 403 AHNILHEMTGVGVRPDTYSYNSLVDGYCKKGLMNKAFETYNTML----RNGFAATT--LT 456

Query: 196 YSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEML 255
           Y+ ++   C  G +D A  L+  M  +GI P  + C+TL+ GF  +G  E+   L+ E L
Sbjct: 457 YNALLKGFCSLGSIDDALRLWFLMLKKGIAPNEISCSTLLDGFFKSGKTEKALNLWKETL 516

Query: 256 DLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRID 315
             G   N  TFN +I+ LCK  ++ EA  L++ M Q    PD  TY +L  GYC +G +D
Sbjct: 517 ARGLAKNTTTFNTVINGLCKIERMPEAEELVDKMKQWRCPPDIITYRTLFSGYCKIGDMD 576

Query: 316 TAR-----------------------------------EIFLSMHSKGCKHTVVSYNILI 340
            A                                    +I   M ++G     V+Y  LI
Sbjct: 577 RASRILNELENLGFAPTIEFFNSLITGHFIAKQHGKVNDILFEMSNRGLSPNTVAYGALI 636

Query: 341 NGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVE 400
            G+CK  ++  A +LY ++I  G+   +   ++L+S  ++ G+   A  +   +   ++ 
Sbjct: 637 AGWCKEGDLHTAYNLYLEMIEKGLVPNLFICSSLVSCFYRKGKFDEANLVLQNLVGTDMI 696

Query: 401 PDLST--------------------------YNILIDGLCKNNCVQEAVKLFHMLEMNKF 434
           PD+S                           +NI+I GLCK   +++A  L   L+   F
Sbjct: 697 PDISAPRLEIGKVANFIDTVAGGNHHSAKIMWNIVIFGLCKLGRIEDAKNLLADLKDKGF 756

Query: 435 EFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKAND 494
                 ++ LI G   +G +D A++L   +   GL P +VTY+ +I+GLC+ G+L +A  
Sbjct: 757 VADNFTYSSLIHGCSASGFVDVAFDLRDTMLSVGLTPNIVTYNSLIYGLCKSGELSRAVS 816

Query: 495 FLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDL 554
               +   G +PN +T+NTL+    ++   ++  +L  +M   E  + P   T+SI+++ 
Sbjct: 817 LFKKLWTKGISPNAITYNTLIDKHCKDGYITEAFKLKQRMI--EEGIHPTVFTYSILING 874

Query: 555 L 555
           L
Sbjct: 875 L 875



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 123/500 (24%), Positives = 232/500 (46%), Gaps = 39/500 (7%)

Query: 75  ISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIK 134
           + S N +   +A+     A ++ + ++   G LPD  T+ I+   +       C    + 
Sbjct: 208 MRSCNSILNRLAQTGDLGATVAVFEQMQRAGALPDKFTVAIMAKAY-------CKVKGVV 260

Query: 135 EATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIF 194
            A    + M   GV  +++ Y  ++NG+C  G  + A R+   +    +   +++ T + 
Sbjct: 261 HALEFVEEMTKMGVEVNLVAYHAVMNGYCEVGQTNDARRMLDSLPGRGFSPNIVTYTLLV 320

Query: 195 S------------------------------YSIIIDSLCKEGLVDKAKELFLEMKGRGI 224
                                          +  +I+  C+ G ++ A  L  EM    +
Sbjct: 321 KGYCNEKNMEEAEGVVQEIRKNKQLVVDEAVFGAVINGYCQMGRMEDAARLLNEMVDSRL 380

Query: 225 NPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANG 284
              + V   +I+G+C  G   E + +  EM  +G RP+  ++N ++D  CK G +N+A  
Sbjct: 381 QVNLFVYNIMINGYCKLGRMVEAHNILHEMTGVGVRPDTYSYNSLVDGYCKKGLMNKAFE 440

Query: 285 LLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYC 344
               M++ G      TYN+L+ G+C +G ID A  ++  M  KG     +S + L++G+ 
Sbjct: 441 TYNTMLRNGFAATTLTYNALLKGFCSLGSIDDALRLWFLMLKKGIAPNEISCSTLLDGFF 500

Query: 345 KILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLS 404
           K    E+A++L+++ ++ G+ +   T+NT+++GL +  +   A++L D+MK +   PD+ 
Sbjct: 501 KSGKTEKALNLWKETLARGLAKNTTTFNTVINGLCKIERMPEAEELVDKMKQWRCPPDII 560

Query: 405 TYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKL 464
           TY  L  G CK   +  A ++ + LE   F   IE FN LI G   A +     ++  ++
Sbjct: 561 TYRTLFSGYCKIGDMDRASRILNELENLGFAPTIEFFNSLITGHFIAKQHGKVNDILFEM 620

Query: 465 PQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKT 524
             +GL P  V Y  +I G C++G L  A +  L M + G  PN+   ++L+  F +  K 
Sbjct: 621 SNRGLSPNTVAYGALIAGWCKEGDLHTAYNLYLEMIEKGLVPNLFICSSLVSCFYRKGKF 680

Query: 525 SKVVELLHKMAEPERNLVPD 544
            +   +L  +   +  ++PD
Sbjct: 681 DEANLVLQNLVGTD--MIPD 698



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 107/372 (28%), Positives = 194/372 (52%), Gaps = 7/372 (1%)

Query: 195 SYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEM 254
           S+ +++ +L   G +D A ++F EM+  G   ++  C ++++     G+      +F +M
Sbjct: 175 SFDLLLRALANAGQLDGALQVFDEMRTLGCRLSMRSCNSILNRLAQTGDLGATVAVFEQM 234

Query: 255 LDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRI 314
              G  P+  T  +M    CK   +  A   +E M + G+  +   Y+++M+GYC VG+ 
Sbjct: 235 QRAGALPDKFTVAIMAKAYCKVKGVVHALEFVEEMTKMGVEVNLVAYHAVMNGYCEVGQT 294

Query: 315 DTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVI---TY 371
           + AR +  S+  +G    +V+Y +L+ GYC   N+EEA  + ++I  N  +Q V+    +
Sbjct: 295 NDARRMLDSLPGRGFSPNIVTYTLLVKGYCNEKNMEEAEGVVQEIRKN--KQLVVDEAVF 352

Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
             +++G  Q G+   A +L +EM    ++ +L  YNI+I+G CK   + EA  + H +  
Sbjct: 353 GAVINGYCQMGRMEDAARLLNEMVDSRLQVNLFVYNIMINGYCKLGRMVEAHNILHEMTG 412

Query: 432 NKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEK 491
                    +N L+DG CK G ++ A+E ++ + + G   T +TY+ ++ G C  G ++ 
Sbjct: 413 VGVRPDTYSYNSLVDGYCKKGLMNKAFETYNTMLRNGFAATTLTYNALLKGFCSLGSIDD 472

Query: 492 ANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIV 551
           A      M K G APN ++ +TL+ GF ++ KT K + L  +     R L  + TTF+ V
Sbjct: 473 ALRLWFLMLKKGIAPNEISCSTLLDGFFKSGKTEKALNLWKETL--ARGLAKNTTTFNTV 530

Query: 552 VDLLAKDEKYHE 563
           ++ L K E+  E
Sbjct: 531 INGLCKIERMPE 542



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 45/206 (21%), Positives = 103/206 (50%), Gaps = 1/206 (0%)

Query: 332 TVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLF 391
           +  S+++L+        ++ A+ ++ ++ + G R ++ + N++L+ L Q G  G    +F
Sbjct: 172 SAASFDLLLRALANAGQLDGALQVFDEMRTLGCRLSMRSCNSILNRLAQTGDLGATVAVF 231

Query: 392 DEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKA 451
           ++M+     PD  T  I+    CK   V  A++    +     E  +  ++ +++G C+ 
Sbjct: 232 EQMQRAGALPDKFTVAIMAKAYCKVKGVVHALEFVEEMTKMGVEVNLVAYHAVMNGYCEV 291

Query: 452 GRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNG-CAPNVVT 510
           G+ ++A  +   LP +G  P +VTY++++ G C +  +E+A   +  + KN     +   
Sbjct: 292 GQTNDARRMLDSLPGRGFSPNIVTYTLLVKGYCNEKNMEEAEGVVQEIRKNKQLVVDEAV 351

Query: 511 FNTLMHGFLQNNKTSKVVELLHKMAE 536
           F  +++G+ Q  +      LL++M +
Sbjct: 352 FGAVINGYCQMGRMEDAARLLNEMVD 377



 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 38/131 (29%), Positives = 61/131 (46%), Gaps = 9/131 (6%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
           N  ++  CKSG   L+ A   F  +     SP   ++N L     K+ +        +++
Sbjct: 799 NSLIYGLCKSG--ELSRAVSLFKKLWTKGISPNAITYNTLIDKHCKDGYITEAFKLKQRM 856

Query: 102 VSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLING 161
           +  G+ P   T +ILIN       GLC +  ++EA  L   MI   V P+ +TY TLI G
Sbjct: 857 IEEGIHPTVFTYSILIN-------GLCTQGYMEEAIKLLDQMIENNVDPNYVTYWTLIQG 909

Query: 162 FCRTGNLSVAL 172
           + R  ++ V +
Sbjct: 910 YVRCESVDVPI 920


>gi|413944227|gb|AFW76876.1| hypothetical protein ZEAMMB73_037126 [Zea mays]
          Length = 595

 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 131/461 (28%), Positives = 218/461 (47%), Gaps = 15/461 (3%)

Query: 71  PSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVE 130
           P+P IS FN L  A+ +  +   +   +  +    + PD +T  IL+N       GLC  
Sbjct: 127 PAPDISIFNSLLTALGRAGNLRGMTELFTSMRDASVKPDVVTYGILLN-------GLCKS 179

Query: 131 NRIKEATWLFKNMIAFG--VRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLI 188
             + +A  +   M + G  V PD+    T+++G C+ G L  A+    + +   + +G  
Sbjct: 180 GHVGDALKVLDRMSSPGSDVCPDIAILNTVVDGLCKIGRLQQAIIFVDERMR--HVHG-- 235

Query: 189 SKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVN 248
              N  +Y+ + D+ C+ G +  A ++   M+  G+ P V+   T+I G C  G      
Sbjct: 236 CAPNAVTYNCLADAFCRVGDIGMACKIVARMEKEGVAPNVITMNTIIGGLCRVGRVGAAL 295

Query: 249 GLFIEMLDLGP--RPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMD 306
             F E   + P  R N +T++ +         ++ A  L   M   G  PD   Y +++ 
Sbjct: 296 EFFREKRTVWPEARGNAVTYSTLASAFLHCNNVDMAMELFHEMADHGHRPDAVMYFTMIS 355

Query: 307 GYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQ 366
           G    GR+  A     SM   G K    +YNILI G+C+   + EA  L  ++   G++ 
Sbjct: 356 GLTQAGRLLDACTTAASMKKAGFKLDAKAYNILIGGFCRKKKLHEAYELLEEMKGVGLQP 415

Query: 367 TVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLF 426
            V TYNTLLSGL +AG      +L   M     +P + T+  L+ G CK     EA+++F
Sbjct: 416 DVYTYNTLLSGLCKAGDFSAVDELLGHMIDDGCQPSVVTFGTLVHGYCKAGKTDEALRIF 475

Query: 427 HMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRK 486
             ++  + +    I+N LID LCK+  +D A +LF ++ +K +   V TY+ ++ GL  K
Sbjct: 476 RSMDEARIQPNTVIYNTLIDFLCKSREVDVAIKLFDEMREKNVPANVTTYNALLKGLQDK 535

Query: 487 GKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKV 527
              EKA + +  M +  C PN VT + LM    +  +T ++
Sbjct: 536 KMAEKAFELMDRMREERCTPNYVTVDVLMEWLPEIGETERL 576



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 123/436 (28%), Positives = 211/436 (48%), Gaps = 16/436 (3%)

Query: 135 EATWLFKNMIAFGV-RPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNI 193
           EA    ++ +A G   PD+  + +L+    R GNL     L   M           K ++
Sbjct: 113 EAAGFLRDSLASGAPAPDISIFNSLLTALGRAGNLRGMTELFTSMRDASV------KPDV 166

Query: 194 FSYSIIIDSLCKEGLVDKAKELFLEMK--GRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
            +Y I+++ LCK G V  A ++   M   G  + P + +  T++ G C  G  ++     
Sbjct: 167 VTYGILLNGLCKSGHVGDALKVLDRMSSPGSDVCPDIAILNTVVDGLCKIGRLQQAIIFV 226

Query: 252 IEMLDL--GPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYC 309
            E +    G  PN +T+N + D  C+ G I  A  ++  M + G+ P+  T N+++ G C
Sbjct: 227 DERMRHVHGCAPNAVTYNCLADAFCRVGDIGMACKIVARMEKEGVAPNVITMNTIIGGLC 286

Query: 310 LVGRIDTAREIFLSMHS--KGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQT 367
            VGR+  A E F    +     +   V+Y+ L + +    NV+ AM L+ ++  +G R  
Sbjct: 287 RVGRVGAALEFFREKRTVWPEARGNAVTYSTLASAFLHCNNVDMAMELFHEMADHGHRPD 346

Query: 368 VITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFH 427
            + Y T++SGL QAG+   A      MK    + D   YNILI G C+   + EA +L  
Sbjct: 347 AVMYFTMISGLTQAGRLLDACTTAASMKKAGFKLDAKAYNILIGGFCRKKKLHEAYELLE 406

Query: 428 MLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKG 487
            ++    +  +  +N L+ GLCKAG      EL   +   G  P+VVT+  ++HG C+ G
Sbjct: 407 EMKGVGLQPDVYTYNTLLSGLCKAGDFSAVDELLGHMIDDGCQPSVVTFGTLVHGYCKAG 466

Query: 488 KLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTT 547
           K ++A      M++    PN V +NTL+    ++ +    ++L  +M   E+N+  + TT
Sbjct: 467 KTDEALRIFRSMDEARIQPNTVIYNTLIDFLCKSREVDVAIKLFDEMR--EKNVPANVTT 524

Query: 548 FSIVVDLLAKDEKYHE 563
           ++ ++  L +D+K  E
Sbjct: 525 YNALLKGL-QDKKMAE 539



 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 73/282 (25%), Positives = 128/282 (45%), Gaps = 13/282 (4%)

Query: 77  SFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEA 136
           +++ L  A     + D  +  + ++   G  PD +    +I+       GL    R+ +A
Sbjct: 314 TYSTLASAFLHCNNVDMAMELFHEMADHGHRPDAVMYFTMIS-------GLTQAGRLLDA 366

Query: 137 TWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSY 196
                +M   G + D   Y  LI GFCR   L  A  L ++M       G+  + ++++Y
Sbjct: 367 CTTAASMKKAGFKLDAKAYNILIGGFCRKKKLHEAYELLEEM------KGVGLQPDVYTY 420

Query: 197 SIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLD 256
           + ++  LCK G      EL   M   G  P+VV   TL+HG+C AG  +E   +F  M +
Sbjct: 421 NTLLSGLCKAGDFSAVDELLGHMIDDGCQPSVVTFGTLVHGYCKAGKTDEALRIFRSMDE 480

Query: 257 LGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDT 316
              +PN + +N +ID LCK  +++ A  L + M ++ +  +  TYN+L+ G       + 
Sbjct: 481 ARIQPNTVIYNTLIDFLCKSREVDVAIKLFDEMREKNVPANVTTYNALLKGLQDKKMAEK 540

Query: 317 AREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQ 358
           A E+   M  + C    V+ ++L+    +I   E      +Q
Sbjct: 541 AFELMDRMREERCTPNYVTVDVLMEWLPEIGETERLKCFMQQ 582


>gi|302761712|ref|XP_002964278.1| hypothetical protein SELMODRAFT_80975 [Selaginella moellendorffii]
 gi|300168007|gb|EFJ34611.1| hypothetical protein SELMODRAFT_80975 [Selaginella moellendorffii]
          Length = 331

 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 105/320 (32%), Positives = 175/320 (54%)

Query: 221 GRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKIN 280
            R   P  +    ++   C     ++      EM   G +P+   +N ++  LC+  K+ 
Sbjct: 2   ARYAPPDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVE 61

Query: 281 EANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILI 340
           EA  L E M+++ +NP+  TYN+L++G C   RI+TA E+F  M  KG   T VSYN LI
Sbjct: 62  EARLLFEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLI 121

Query: 341 NGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVE 400
           +G+CK  ++  A  ++ +++ +     V+TY TL+ GL ++G+   A ++ D M    V 
Sbjct: 122 DGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVT 181

Query: 401 PDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWEL 460
           P+++TY+ LIDG CK   V EA KL   +        +  +N L++ LC+A +L++A++L
Sbjct: 182 PNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKL 241

Query: 461 FHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQ 520
           F  + Q+   PTVVTY+ ++  LC   +L+ A+     M   GC P+ +T++TL  G  +
Sbjct: 242 FRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTR 301

Query: 521 NNKTSKVVELLHKMAEPERN 540
             K  +  EL+ KM   +RN
Sbjct: 302 AGKVHEAQELMEKMKLTKRN 321



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 112/326 (34%), Positives = 172/326 (52%), Gaps = 13/326 (3%)

Query: 108 PDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGN 167
           PD LT   ++      ER LC   RI +A    + M   G++PD   Y  +++G C+   
Sbjct: 7   PDALTYGPIV------ER-LCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEK 59

Query: 168 LSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPA 227
           +  A  L +KMV            N+ +Y+ +I+ LCK   ++ A ELF EM G+G  P 
Sbjct: 60  VEEARLLFEKMVKQRIN------PNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPT 113

Query: 228 VVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLE 287
            V   TLI GFC   +      +F +M+     PN++T+  +ID L K GK+  A  +L+
Sbjct: 114 EVSYNTLIDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLD 173

Query: 288 LMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKIL 347
            M+++G+ P+  TY+ L+DG+C V R+D A ++   M ++G   TVV+YNIL+N  C+  
Sbjct: 174 GMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRAD 233

Query: 348 NVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYN 407
            +E+A  L+R +       TV+TYNTLL  L    Q   A +L+ EM      PD  TY+
Sbjct: 234 KLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYD 293

Query: 408 ILIDGLCKNNCVQEAVKLFHMLEMNK 433
            L  GL +   V EA +L   +++ K
Sbjct: 294 TLAWGLTRAGKVHEAQELMEKMKLTK 319



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 105/331 (31%), Positives = 176/331 (53%), Gaps = 14/331 (4%)

Query: 72  SPPIS-SFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVE 130
           +PP + ++  +   + K +  D  ++   ++ + G+ PD    N +++       GLC E
Sbjct: 5   APPDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLS-------GLCQE 57

Query: 131 NRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISK 190
            +++EA  LF+ M+   + P+V+TY TLING C+   +  A  L K+M    Y    +S 
Sbjct: 58  EKVEEARLLFEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVS- 116

Query: 191 TNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGL 250
                Y+ +ID  CK+  +  AK++F +M      P VV  TTLI G   +G  +    +
Sbjct: 117 -----YNTLIDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEV 171

Query: 251 FIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCL 310
              M+  G  PN+ T++ +ID  CK  +++EA+ LLE M+ +G+ P   TYN L++  C 
Sbjct: 172 LDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCR 231

Query: 311 VGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVIT 370
             +++ A ++F  M  + C  TVV+YN L+   C    ++ A  LY ++I+ G     IT
Sbjct: 232 ADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAIT 291

Query: 371 YNTLLSGLFQAGQAGYAQKLFDEMKLYNVEP 401
           Y+TL  GL +AG+   AQ+L ++MKL    P
Sbjct: 292 YDTLAWGLTRAGKVHEAQELMEKMKLTKRNP 322



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 96/309 (31%), Positives = 159/309 (51%)

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
           +  +Y  I++ LCK   +D A     EM  RGI P   +   ++ G C     EE   LF
Sbjct: 8   DALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLF 67

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
            +M+     PN++T+N +I+ LCK  +I  A  L + M  +G  P   +YN+L+DG+C  
Sbjct: 68  EKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKK 127

Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
             +  A+++F  M    C   VV+Y  LI+G  K   V+ A  +   ++  GV   V TY
Sbjct: 128 KDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATY 187

Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
           + L+ G  +  +   A KL ++M    + P + TYNIL++ LC+ + +++A KLF  +  
Sbjct: 188 SCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQ 247

Query: 432 NKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEK 491
            +    +  +N L+  LC   +LD A  L+ ++  KG  P  +TY  +  GL R GK+ +
Sbjct: 248 RRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHE 307

Query: 492 ANDFLLYME 500
           A + +  M+
Sbjct: 308 AQELMEKMK 316


>gi|357502007|ref|XP_003621292.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|124360248|gb|ABN08261.1| Pentatricopeptide repeat [Medicago truncatula]
 gi|355496307|gb|AES77510.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 738

 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 146/542 (26%), Positives = 245/542 (45%), Gaps = 93/542 (17%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
           P I SFN L   + K+   D  +  + +  S GL+ +  T  I+I       + LC +  
Sbjct: 188 PNILSFNFLINRLVKHDEVDMALCLFVRFKSFGLIFNEYTYTIVI-------KALCKKGD 240

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYE--NGLISK 190
            +    +F  M   GV  D   Y T I G C+     +        V  DY   N  + K
Sbjct: 241 WENVVRVFDEMKEAGVDDDSYCYATFIEGLCKNNRSDLGY-----AVLQDYRTRNAHVHK 295

Query: 191 TNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGL 250
              ++Y+ +I   C E  +D+A+ +FLEM+ +G+ P V V   L+HG+C + N+++   +
Sbjct: 296 ---YAYTAVIRGFCNETKLDEAESVFLEMEKQGLVPDVYVYCALVHGYCNSRNFDKALAV 352

Query: 251 FIEMLDLGPRPNLLTF-----------------------------------NVMIDCLCK 275
           +  M+  G + N + F                                   N++ D LCK
Sbjct: 353 YKSMISRGIKTNCVIFSCILHCLDEMGRALEVVDMFEEFKESGLFIDRKAYNILFDALCK 412

Query: 276 GGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVS 335
            GK+++A G+L+ +    L+ D   Y +L++GY L G+   A+ +F  M  +G K  VV+
Sbjct: 413 LGKVDDAVGMLDELKSMQLDVDMKHYTTLINGYFLQGKPIEAQSLFKEMEERGFKPDVVA 472

Query: 336 YNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMK 395
           YN+L  G+ +     EAM L   + S GV     T+  ++ GL  AG+   A++ F+ +K
Sbjct: 473 YNVLAAGFFRNRTDFEAMDLLNYMESQGVEPNSTTHKIIIEGLCSAGKVEEAEEFFNWLK 532

Query: 396 LYNVEPDLSTYNILIDGLC------KNNCVQEAVKLFH-MLEMN---------------- 432
             +VE  +  Y  L++G C      K++ ++EA  L   MLEMN                
Sbjct: 533 GESVEISVEIYTALVNGYCEAALIEKSHELKEAFILLRTMLEMNMKPSKVMYSKIFTALC 592

Query: 433 ---KFEFGIEIFN---------------CLIDGLCKAGRLDNAWELFHKLPQKGLVPTVV 474
                E    +FN                +I+G CK   L  A ELF  + ++G+ P  V
Sbjct: 593 CNGNMEGAHTLFNLFIHTGFTPDAVTYTIMINGYCKTNCLPEAHELFKDMKERGITPDAV 652

Query: 475 TYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKM 534
           TY+IMI+G C+   L +A++    M++ G  P+V+ +  ++ G L +  T    +L ++M
Sbjct: 653 TYTIMINGYCKMNCLREAHELFKDMKERGIKPDVIAYTVIIKGLLNSGHTEIAFQLYNEM 712

Query: 535 AE 536
            +
Sbjct: 713 ID 714



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 127/545 (23%), Positives = 240/545 (44%), Gaps = 69/545 (12%)

Query: 51  SGIINLNEARYFFGYMTHMQPSPPISSFNLLFGA-VAKNRHYDAVISFYRKLVSIGLLPD 109
            G+ ++NE  Y F            ++FN    A V++N   +A+    +   ++ +LP+
Sbjct: 142 EGVNDVNEDHYLF------------NAFNGFVKACVSQNMFVEAIDFLLQTRKNVVILPN 189

Query: 110 FLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLS 169
            L+ N LIN        L   + +  A  LF    +FG+  +  TY  +I   C+ G+  
Sbjct: 190 ILSFNFLIN-------RLVKHDEVDMALCLFVRFKSFGLIFNEYTYTIVIKALCKKGDWE 242

Query: 170 VALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVV 229
             +R+  +M     ++      + + Y+  I+ LCK    D    +  + + R  +    
Sbjct: 243 NVVRVFDEMKEAGVDD------DSYCYATFIEGLCKNNRSDLGYAVLQDYRTRNAHVHKY 296

Query: 230 VCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELM 289
             T +I GFC     +E   +F+EM   G  P++  +  ++   C     ++A  + + M
Sbjct: 297 AYTAVIRGFCNETKLDEAESVFLEMEKQGLVPDVYVYCALVHGYCNSRNFDKALAVYKSM 356

Query: 290 IQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNV 349
           I RG+  +   ++ ++     +GR     ++F      G      +YNIL +  CK+  V
Sbjct: 357 ISRGIKTNCVIFSCILHCLDEMGRALEVVDMFEEFKESGLFIDRKAYNILFDALCKLGKV 416

Query: 350 EEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNIL 409
           ++A+ +  ++ S  +   +  Y TL++G F  G+   AQ LF EM+    +PD+  YN+L
Sbjct: 417 DDAVGMLDELKSMQLDVDMKHYTTLINGYFLQGKPIEAQSLFKEMEERGFKPDVVAYNVL 476

Query: 410 IDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGL 469
             G  +N    EA+ L + +E    E        +I+GLC AG+++ A E F+ L  + +
Sbjct: 477 AAGFFRNRTDFEAMDLLNYMESQGVEPNSTTHKIIIEGLCSAGKVEEAEEFFNWLKGESV 536

Query: 470 VPTVVTYSIMIHGLCRKGKLEKAND----FLL---YMEKN-------------------- 502
             +V  Y+ +++G C    +EK+++    F+L    +E N                    
Sbjct: 537 EISVEIYTALVNGYCEAALIEKSHELKEAFILLRTMLEMNMKPSKVMYSKIFTALCCNGN 596

Query: 503 --------------GCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTF 548
                         G  P+ VT+  +++G+ + N   +  EL   M   ER + PD  T+
Sbjct: 597 MEGAHTLFNLFIHTGFTPDAVTYTIMINGYCKTNCLPEAHELFKDM--KERGITPDAVTY 654

Query: 549 SIVVD 553
           +I+++
Sbjct: 655 TIMIN 659



 Score =  162 bits (409), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 109/354 (30%), Positives = 170/354 (48%), Gaps = 29/354 (8%)

Query: 77  SFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEA 136
           ++N+LF A+ K    D  +    +L S+ L  D      LIN       G  ++ +  EA
Sbjct: 402 AYNILFDALCKLGKVDDAVGMLDELKSMQLDVDMKHYTTLIN-------GYFLQGKPIEA 454

Query: 137 TWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSY 196
             LFK M   G +PDV+ Y  L  GF R      A+ L   M S   E       N  ++
Sbjct: 455 QSLFKEMEERGFKPDVVAYNVLAAGFFRNRTDFEAMDLLNYMESQGVE------PNSTTH 508

Query: 197 SIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWE---EVNGLFI- 252
            III+ LC  G V++A+E F  +KG  +  +V + T L++G+C A   E   E+   FI 
Sbjct: 509 KIIIEGLCSAGKVEEAEEFFNWLKGESVEISVEIYTALVNGYCEAALIEKSHELKEAFIL 568

Query: 253 --EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCL 310
              ML++  +P+ + ++ +   LC  G +  A+ L  L I  G  PD  TY  +++GYC 
Sbjct: 569 LRTMLEMNMKPSKVMYSKIFTALCCNGNMEGAHTLFNLFIHTGFTPDAVTYTIMINGYCK 628

Query: 311 VGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVIT 370
              +  A E+F  M  +G     V+Y I+INGYCK+  + EA  L++ +   G++  VI 
Sbjct: 629 TNCLPEAHELFKDMKERGITPDAVTYTIMINGYCKMNCLREAHELFKDMKERGIKPDVIA 688

Query: 371 YNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVK 424
           Y  ++ GL  +G    A +L++EM    + P          G     C+Q+A K
Sbjct: 689 YTVIIKGLLNSGHTEIAFQLYNEMIDMGMTP----------GATLKRCIQKANK 732



 Score =  119 bits (299), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 103/436 (23%), Positives = 169/436 (38%), Gaps = 95/436 (21%)

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGN-------- 243
           NI +Y+ II  LC   L  K   LFL++              L        N        
Sbjct: 94  NIQTYTSIIRILCYYNLDRKLDSLFLDIIDHSKQDPCFEINVLFDSLFEGVNDVNEDHYL 153

Query: 244 WEEVNG---------LFIEMLD--LGPR------PNLLTFN------------------- 267
           +   NG         +F+E +D  L  R      PN+L+FN                   
Sbjct: 154 FNAFNGFVKACVSQNMFVEAIDFLLQTRKNVVILPNILSFNFLINRLVKHDEVDMALCLF 213

Query: 268 ----------------VMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
                           ++I  LCK G       + + M + G++ D + Y + ++G C  
Sbjct: 214 VRFKSFGLIFNEYTYTIVIKALCKKGDWENVVRVFDEMKEAGVDDDSYCYATFIEGLCKN 273

Query: 312 GR-----------------------------------IDTAREIFLSMHSKGCKHTVVSY 336
            R                                   +D A  +FL M  +G    V  Y
Sbjct: 274 NRSDLGYAVLQDYRTRNAHVHKYAYTAVIRGFCNETKLDEAESVFLEMEKQGLVPDVYVY 333

Query: 337 NILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKL 396
             L++GYC   N ++A+++Y+ +IS G++   + ++ +L  L + G+A     +F+E K 
Sbjct: 334 CALVHGYCNSRNFDKALAVYKSMISRGIKTNCVIFSCILHCLDEMGRALEVVDMFEEFKE 393

Query: 397 YNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDN 456
             +  D   YNIL D LCK   V +AV +   L+  + +  ++ +  LI+G    G+   
Sbjct: 394 SGLFIDRKAYNILFDALCKLGKVDDAVGMLDELKSMQLDVDMKHYTTLINGYFLQGKPIE 453

Query: 457 AWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMH 516
           A  LF ++ ++G  P VV Y+++  G  R     +A D L YME  G  PN  T   ++ 
Sbjct: 454 AQSLFKEMEERGFKPDVVAYNVLAAGFFRNRTDFEAMDLLNYMESQGVEPNSTTHKIIIE 513

Query: 517 GFLQNNKTSKVVELLH 532
           G     K  +  E  +
Sbjct: 514 GLCSAGKVEEAEEFFN 529



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 87/352 (24%), Positives = 153/352 (43%), Gaps = 23/352 (6%)

Query: 212 AKELFLEMKGR-GINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMI 270
           A   F ++K + G +  +   T++I   C      +++ LF++++D   +      NV+ 
Sbjct: 78  AYSYFTQLKNQHGFSHNIQTYTSIIRILCYYNLDRKLDSLFLDIIDHSKQDPCFEINVLF 137

Query: 271 DCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGY---CLVGRIDTAREIFLSMHSK 327
           D L +G  +N+            +N D + +N+  +G+   C+   +      FL    K
Sbjct: 138 DSLFEG--VND------------VNEDHYLFNAF-NGFVKACVSQNMFVEAIDFLLQTRK 182

Query: 328 GCK--HTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAG 385
                  ++S+N LIN   K   V+ A+ L+ +  S G+     TY  ++  L + G   
Sbjct: 183 NVVILPNILSFNFLINRLVKHDEVDMALCLFVRFKSFGLIFNEYTYTIVIKALCKKGDWE 242

Query: 386 YAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLI 445
              ++FDEMK   V+ D   Y   I+GLCKNN       +               +  +I
Sbjct: 243 NVVRVFDEMKEAGVDDDSYCYATFIEGLCKNNRSDLGYAVLQDYRTRNAHVHKYAYTAVI 302

Query: 446 DGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCA 505
            G C   +LD A  +F ++ ++GLVP V  Y  ++HG C     +KA      M   G  
Sbjct: 303 RGFCNETKLDEAESVFLEMEKQGLVPDVYVYCALVHGYCNSRNFDKALAVYKSMISRGIK 362

Query: 506 PNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAK 557
            N V F+ ++H   +  +  +VV++  +  E    L  D   ++I+ D L K
Sbjct: 363 TNCVIFSCILHCLDEMGRALEVVDMFEEFKES--GLFIDRKAYNILFDALCK 412



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 34/126 (26%), Positives = 59/126 (46%), Gaps = 7/126 (5%)

Query: 55  NLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLN 114
           N+  A   F    H   +P   ++ ++     K          ++ +   G+ PD +T  
Sbjct: 596 NMEGAHTLFNLFIHTGFTPDAVTYTIMINGYCKTNCLPEAHELFKDMKERGITPDAVTYT 655

Query: 115 ILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRL 174
           I+IN       G C  N ++EA  LFK+M   G++PDVI Y  +I G   +G+  +A +L
Sbjct: 656 IMIN-------GYCKMNCLREAHELFKDMKERGIKPDVIAYTVIIKGLLNSGHTEIAFQL 708

Query: 175 HKKMVS 180
           + +M+ 
Sbjct: 709 YNEMID 714


>gi|255574462|ref|XP_002528143.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223532441|gb|EEF34234.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 653

 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 128/480 (26%), Positives = 239/480 (49%), Gaps = 25/480 (5%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLV---SIGLLPDFLTLNILINCFGNKERGLCV 129
           P + SFN +   + +   +D  + FY  +V    + +LP+ L+ N++I       + +C 
Sbjct: 141 PTVKSFNSVLNVIIQAGFHDRALEFYNHVVGAKDMNILPNVLSFNLII-------KSMCK 193

Query: 130 ENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKM-VSGDYENGLI 188
              +  A  LF+ M      PD  TY TL++G C+   +  A+ L  +M + G + +   
Sbjct: 194 LGLVDNAIELFREMPVRKCVPDAYTYCTLMDGLCKVDRIDEAVSLLDEMQIEGCFPSPA- 252

Query: 189 SKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVN 248
                 +++++I+ LCK+G   +  +L   M  +G  P  V   TLIHG C  G  ++  
Sbjct: 253 ------TFNVLINGLCKKGDFTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAL 306

Query: 249 GLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGY 308
            L   M+     PN +T+  +I+ L K G+  +   +L LM +RG   + + Y+ L+ G 
Sbjct: 307 SLLDRMVSSKCVPNEVTYGTIINGLVKQGRALDGARVLVLMEERGYIVNEYVYSVLVSGL 366

Query: 309 CLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTV 368
              G+ + A  +F     KGCK   V Y+ L++G C+    +EAM +  ++   G     
Sbjct: 367 FKEGKSEEAMRLFKESMDKGCKLNTVLYSALVDGLCRDRKPDEAMKILSEMTDKGCAPNA 426

Query: 369 ITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHM 428
            T+++L+ G F+ G +  A +++ +M   N   +   Y++LI GLCK+  V EA+ ++  
Sbjct: 427 FTFSSLMKGFFEVGNSHKAIEVWKDMTKINCAENEVCYSVLIHGLCKDGKVMEAMMVWAK 486

Query: 429 LEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKL--PQKGLVPTVVTYSIMIHGLCRK 486
           +        +  ++ +I GLC AG ++ A +L++++   +    P V+TY+I+ + LC++
Sbjct: 487 MLATGCRPDVVAYSSMIQGLCDAGSVEEALKLYNEMLCLEPDSQPDVITYNILFNALCKQ 546

Query: 487 GKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQ-----NNKTSKVVELLHKMAEPERNL 541
             + +A D L  M   GC P++VT N  +    +      +    + EL+ ++ + +RNL
Sbjct: 547 SSISRAVDLLNSMLDRGCDPDLVTCNIFLRMLREKLDPPQDGAKFLDELVVRLLKRQRNL 606



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 140/478 (29%), Positives = 223/478 (46%), Gaps = 38/478 (7%)

Query: 40  QLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYR 99
             N  +   CK G+++   A   F  M   +  P   ++  L   + K    D  +S   
Sbjct: 183 SFNLIIKSMCKLGLVD--NAIELFREMPVRKCVPDAYTYCTLMDGLCKVDRIDEAVSLLD 240

Query: 100 KLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLI 159
           ++   G  P   T N+LIN       GLC +      T L  NM   G  P+ +TY TLI
Sbjct: 241 EMQIEGCFPSPATFNVLIN-------GLCKKGDFTRVTKLVDNMFLKGCVPNEVTYNTLI 293

Query: 160 NGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEM 219
           +G C  G L  AL L  +MVS           N  +Y  II+ L K+G       + + M
Sbjct: 294 HGLCLKGKLDKALSLLDRMVSSK------CVPNEVTYGTIINGLVKQGRALDGARVLVLM 347

Query: 220 KGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKI 279
           + RG      V + L+ G    G  EE   LF E +D G + N + ++ ++D LC+  K 
Sbjct: 348 EERGYIVNEYVYSVLVSGLFKEGKSEEAMRLFKESMDKGCKLNTVLYSALVDGLCRDRKP 407

Query: 280 NEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNIL 339
           +EA  +L  M  +G  P+ FT++SLM G+  VG    A E++  M    C    V Y++L
Sbjct: 408 DEAMKILSEMTDKGCAPNAFTFSSLMKGFFEVGNSHKAIEVWKDMTKINCAENEVCYSVL 467

Query: 340 INGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLY-- 397
           I+G CK   V EAM ++ ++++ G R  V+ Y++++ GL  AG    A KL++EM     
Sbjct: 468 IHGLCKDGKVMEAMMVWAKMLATGCRPDVVAYSSMIQGLCDAGSVEEALKLYNEMLCLEP 527

Query: 398 NVEPDLSTYNILIDGLCKNNCVQEAVKLFHML---------------------EMNKFEF 436
           + +PD+ TYNIL + LCK + +  AV L + +                     +++  + 
Sbjct: 528 DSQPDVITYNILFNALCKQSSISRAVDLLNSMLDRGCDPDLVTCNIFLRMLREKLDPPQD 587

Query: 437 GIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKAND 494
           G +  + L+  L K  R   A ++   + QK L P   T++ ++H LC+  K++   D
Sbjct: 588 GAKFLDELVVRLLKRQRNLGASKIVEVMLQKFLSPKASTWARVVHELCQPKKIQAVID 645



 Score =  194 bits (494), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 129/424 (30%), Positives = 206/424 (48%), Gaps = 4/424 (0%)

Query: 135 EATWLFKNM-IAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNI 193
           +A  LF  M   F  +P V ++ +++N   + G    AL  +  +V     N L    N+
Sbjct: 125 KAIELFYRMSFEFYCKPTVKSFNSVLNVIIQAGFHDRALEFYNHVVGAKDMNIL---PNV 181

Query: 194 FSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIE 253
            S+++II S+CK GLVD A ELF EM  R   P      TL+ G C     +E   L  E
Sbjct: 182 LSFNLIIKSMCKLGLVDNAIELFREMPVRKCVPDAYTYCTLMDGLCKVDRIDEAVSLLDE 241

Query: 254 MLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGR 313
           M   G  P+  TFNV+I+ LCK G       L++ M  +G  P+  TYN+L+ G CL G+
Sbjct: 242 MQIEGCFPSPATFNVLINGLCKKGDFTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGK 301

Query: 314 IDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNT 373
           +D A  +   M S  C    V+Y  +ING  K     +   +   +   G       Y+ 
Sbjct: 302 LDKALSLLDRMVSSKCVPNEVTYGTIINGLVKQGRALDGARVLVLMEERGYIVNEYVYSV 361

Query: 374 LLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNK 433
           L+SGLF+ G++  A +LF E      + +   Y+ L+DGLC++    EA+K+   +    
Sbjct: 362 LVSGLFKEGKSEEAMRLFKESMDKGCKLNTVLYSALVDGLCRDRKPDEAMKILSEMTDKG 421

Query: 434 FEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKAN 493
                  F+ L+ G  + G    A E++  + +       V YS++IHGLC+ GK+ +A 
Sbjct: 422 CAPNAFTFSSLMKGFFEVGNSHKAIEVWKDMTKINCAENEVCYSVLIHGLCKDGKVMEAM 481

Query: 494 DFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
                M   GC P+VV +++++ G        + ++L ++M   E +  PD  T++I+ +
Sbjct: 482 MVWAKMLATGCRPDVVAYSSMIQGLCDAGSVEEALKLYNEMLCLEPDSQPDVITYNILFN 541

Query: 554 LLAK 557
            L K
Sbjct: 542 ALCK 545



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 123/418 (29%), Positives = 201/418 (48%), Gaps = 12/418 (2%)

Query: 154 TYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAK 213
           T+ +LI  +  + + +   ++  +M     EN + S+ + F   ++  +  K  L +KA 
Sbjct: 74  TFYSLIENYAYSSDFNSLEKVLNRM---RLENRVFSEKSFF---VMFKAYGKAHLPNKAI 127

Query: 214 ELFLEMKGR-GINPAVVVCTTLIHGFCCAGNWEEVNGLFIEML---DLGPRPNLLTFNVM 269
           ELF  M       P V    ++++    AG  +     +  ++   D+   PN+L+FN++
Sbjct: 128 ELFYRMSFEFYCKPTVKSFNSVLNVIIQAGFHDRALEFYNHVVGAKDMNILPNVLSFNLI 187

Query: 270 IDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGC 329
           I  +CK G ++ A  L   M  R   PD +TY +LMDG C V RID A  +   M  +GC
Sbjct: 188 IKSMCKLGLVDNAIELFREMPVRKCVPDAYTYCTLMDGLCKVDRIDEAVSLLDEMQIEGC 247

Query: 330 KHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQK 389
             +  ++N+LING CK  +      L   +   G     +TYNTL+ GL   G+   A  
Sbjct: 248 FPSPATFNVLINGLCKKGDFTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALS 307

Query: 390 LFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLC 449
           L D M      P+  TY  +I+GL K     +  ++  ++E   +     +++ L+ GL 
Sbjct: 308 LLDRMVSSKCVPNEVTYGTIINGLVKQGRALDGARVLVLMEERGYIVNEYVYSVLVSGLF 367

Query: 450 KAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVV 509
           K G+ + A  LF +   KG     V YS ++ GLCR  K ++A   L  M   GCAPN  
Sbjct: 368 KEGKSEEAMRLFKESMDKGCKLNTVLYSALVDGLCRDRKPDEAMKILSEMTDKGCAPNAF 427

Query: 510 TFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAV 567
           TF++LM GF +   + K +E+   M +   N   ++  +S+++  L KD K  E   V
Sbjct: 428 TFSSLMKGFFEVGNSHKAIEVWKDMTKI--NCAENEVCYSVLIHGLCKDGKVMEAMMV 483


>gi|255585033|ref|XP_002533225.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223526957|gb|EEF29157.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 605

 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 149/535 (27%), Positives = 251/535 (46%), Gaps = 55/535 (10%)

Query: 66  MTHMQPSPPISSFNLLFGAVAKNRHYDAVI---SFYRKLVSIGLLPDFLTLNILINCFGN 122
           M  +   P + + N L  A+ +     +V    + +  ++ +G+  +  T NILI C   
Sbjct: 1   MKRLHLKPNLLTLNTLIKALVRYPSKPSVYLSKAIFSDVIKLGVEVNTNTFNILI-C--- 56

Query: 123 KERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGD 182
              G C+EN++ EA  L   M  F   PD ++Y T+++  C+ G L+ A  L   M +  
Sbjct: 57  ---GCCIENKLSEAIGLIGKMKHFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDMKN-- 111

Query: 183 YENGLISKTNIF---------------------------------SYSIIIDSLCKEGLV 209
             NGL    N F                                 +Y+ +I  LCK+G +
Sbjct: 112 --NGLFPNRNTFNILVSGYCKLGWLKEAAEVIDIMARNNVLPDVRTYTTLIGGLCKDGKI 169

Query: 210 DKAKELFLEMKGRGINPAVVVCTTLIHG-FCCAGNWEEVNGLFIEMLDLGPRPNLLTFNV 268
           D+A  L  EM+   + P VV    LI+G F C+ + +    L  EM   G +PN +T+NV
Sbjct: 170 DEAFRLRDEMENLKLLPHVVTYNMLINGCFECSSSLKGFE-LIDEMEGKGVKPNAVTYNV 228

Query: 269 MIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKG 328
           ++    K GK++ A   L  M + G +PD  T+N+L +GYC  GR+  A  +   M  KG
Sbjct: 229 VVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLSNGYCKAGRLSEAFRMMDEMSRKG 288

Query: 329 CKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQ 388
            K   V+ N +++  C    +++A  L       G     ++Y TL+ G F+ G++    
Sbjct: 289 LKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKVGKS---- 344

Query: 389 KLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGL 448
             +DEMK   + P + TY  +I GLC++    +++   + L  +        +N +I G 
Sbjct: 345 XXWDEMKEKEIIPSIITYGTMIGGLCRSGKTDQSIDKCNELLESGLVPDQTTYNTIILGY 404

Query: 449 CKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNV 508
           C+ G++D A+   +K+ +K   P + T +I++ GLC +G L+KA          G A + 
Sbjct: 405 CREGQVDKAFHFRNKMVKKSFKPDLFTCNILVRGLCTEGMLDKALKLFKTWISKGKAIDA 464

Query: 509 VTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
           VTFNT++ G  +  +  +  +LL +M   E+ L PD  T + ++  LA   +  E
Sbjct: 465 VTFNTIISGLCEEGRFEEAFDLLAEM--EEKKLGPDCYTHNAILSALADAGRMKE 517



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 140/486 (28%), Positives = 231/486 (47%), Gaps = 27/486 (5%)

Query: 56  LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNI 115
           L+EA    G M H    P   S+N +   + K    +        + + GL P+  T NI
Sbjct: 64  LSEAIGLIGKMKHFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDMKNNGLFPNRNTFNI 123

Query: 116 LINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLH 175
           L++       G C    +KEA  +   M    V PDV TY TLI G C+ G +  A RL 
Sbjct: 124 LVS-------GYCKLGWLKEAAEVIDIMARNNVLPDVRTYTTLIGGLCKDGKIDEAFRLR 176

Query: 176 KKMVSGDYENGLISKTNIFSYSIIIDSL--CKEGLVDKAKELFLEMKGRGINPAVVVCTT 233
            +M     EN L    ++ +Y+++I+    C   L  K  EL  EM+G+G+ P  V    
Sbjct: 177 DEM-----EN-LKLLPHVVTYNMLINGCFECSSSL--KGFELIDEMEGKGVKPNAVTYNV 228

Query: 234 LIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRG 293
           ++  +   G  +       +M + G  P+ +TFN + +  CK G+++EA  +++ M ++G
Sbjct: 229 VVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLSNGYCKAGRLSEAFRMMDEMSRKG 288

Query: 294 LNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAM 353
           L  +  T N+++   C   ++D A ++  S   +G     VSY  LI GY K+       
Sbjct: 289 LKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKV----GKS 344

Query: 354 SLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGL 413
             + ++    +  ++ITY T++ GL ++G+   +    +E+    + PD +TYN +I G 
Sbjct: 345 XXWDEMKEKEIIPSIITYGTMIGGLCRSGKTDQSIDKCNELLESGLVPDQTTYNTIILGY 404

Query: 414 CKNNCVQEAVKLFHML-EMNKFEFGIEIFNC--LIDGLCKAGRLDNAWELFHKLPQKGLV 470
           C+   V +A   FH   +M K  F  ++F C  L+ GLC  G LD A +LF     KG  
Sbjct: 405 CREGQVDKA---FHFRNKMVKKSFKPDLFTCNILVRGLCTEGMLDKALKLFKTWISKGKA 461

Query: 471 PTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVEL 530
              VT++ +I GLC +G+ E+A D L  ME+    P+  T N ++       +  +  E 
Sbjct: 462 IDAVTFNTIISGLCEEGRFEEAFDLLAEMEEKKLGPDCYTHNAILSALADAGRMKEAEEF 521

Query: 531 LHKMAE 536
           +  + E
Sbjct: 522 MSGIVE 527



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 117/427 (27%), Positives = 202/427 (47%), Gaps = 40/427 (9%)

Query: 190 KTNIFSYSIIIDSLCK---EGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEE 246
           K N+ + + +I +L +   +  V  +K +F ++   G+         LI G C      E
Sbjct: 7   KPNLLTLNTLIKALVRYPSKPSVYLSKAIFSDVIKLGVEVNTNTFNILICGCCIENKLSE 66

Query: 247 VNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMD 306
             GL  +M      P+ +++N ++D LCK GK+NEA  LL  M   GL P+R T+N L+ 
Sbjct: 67  AIGLIGKMKHFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDMKNNGLFPNRNTFNILVS 126

Query: 307 GYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQ 366
           GYC +G +  A E+   M        V +Y  LI G CK   ++EA  L  ++ +  +  
Sbjct: 127 GYCKLGWLKEAAEVIDIMARNNVLPDVRTYTTLIGGLCKDGKIDEAFRLRDEMENLKLLP 186

Query: 367 TVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLF 426
            V+TYN L++G F+   +    +L DEM+   V+P+  TYN+++    K   +  A    
Sbjct: 187 HVVTYNMLINGCFECSSSLKGFELIDEMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNEL 246

Query: 427 HMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRK 486
             +E + F      FN L +G CKAGRL  A+ +  ++ +KGL    VT + ++H LC +
Sbjct: 247 RKMEESGFSPDCVTFNTLSNGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGE 306

Query: 487 GKLEKANDFLLYMEKNG-------------------------------CAPNVVTFNTLM 515
            KL+ A   L    K G                                 P+++T+ T++
Sbjct: 307 RKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKVGKSXXWDEMKEKEIIPSIITYGTMI 366

Query: 516 HGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAK----DEKYHECSAVSKSS 571
            G  ++ KT + ++  +++ E    LVPD TT++ ++    +    D+ +H  + + K S
Sbjct: 367 GGLCRSGKTDQSIDKCNELLES--GLVPDQTTYNTIILGYCREGQVDKAFHFRNKMVKKS 424

Query: 572 YRACLYV 578
           ++  L+ 
Sbjct: 425 FKPDLFT 431



 Score =  159 bits (401), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 131/492 (26%), Positives = 216/492 (43%), Gaps = 69/492 (14%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CK G   L EA      M      P + ++  L G + K+   D       ++ ++ LLP
Sbjct: 129 CKLGW--LKEAAEVIDIMARNNVLPDVRTYTTLIGGLCKDGKIDEAFRLRDEMENLKLLP 186

Query: 109 DFLTLNILIN-CF------------------GNKERGLCV---------ENRIKEATWLF 140
             +T N+LIN CF                  G K   +           E ++  A    
Sbjct: 187 HVVTYNMLINGCFECSSSLKGFELIDEMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNEL 246

Query: 141 KNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIII 200
           + M   G  PD +T+ TL NG+C+ G LS A R+  +M       GL  K N  + + I+
Sbjct: 247 RKMEESGFSPDCVTFNTLSNGYCKAGRLSEAFRMMDEMS----RKGL--KMNSVTLNTIL 300

Query: 201 DSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGN---WEEVNGLFIEMLDL 257
            +LC E  +D A +L      RG     V   TLI G+   G    W+E       M + 
Sbjct: 301 HTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKVGKSXXWDE-------MKEK 353

Query: 258 GPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTA 317
              P+++T+  MI  LC+ GK +++      +++ GL PD+ TYN+++ GYC  G++D A
Sbjct: 354 EIIPSIITYGTMIGGLCRSGKTDQSIDKCNELLESGLVPDQTTYNTIILGYCREGQVDKA 413

Query: 318 REIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSG 377
                 M  K  K  + + NIL+ G C    +++A+ L++  IS G     +T+NT++SG
Sbjct: 414 FHFRNKMVKKSFKPDLFTCNILVRGLCTEGMLDKALKLFKTWISKGKAIDAVTFNTIISG 473

Query: 378 LFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLF----------- 426
           L + G+   A  L  EM+   + PD  T+N ++  L     ++EA +             
Sbjct: 474 LCEEGRFEEAFDLLAEMEEKKLGPDCYTHNAILSALADAGRMKEAEEFMSGIVEQGKLQD 533

Query: 427 HMLEMNKFEFGIE------------IFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVV 474
             + +NK +                 F+  I+ LC  G+  +A  +  +  QKG++    
Sbjct: 534 QTISLNKRKTESSSETSQESDPNSVAFSEQINELCTQGKYKDAMHMIQESTQKGIILHKS 593

Query: 475 TYSIMIHGLCRK 486
           TY  ++ GL ++
Sbjct: 594 TYISLMEGLIKR 605


>gi|302758668|ref|XP_002962757.1| hypothetical protein SELMODRAFT_70280 [Selaginella moellendorffii]
 gi|300169618|gb|EFJ36220.1| hypothetical protein SELMODRAFT_70280 [Selaginella moellendorffii]
          Length = 439

 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 115/389 (29%), Positives = 199/389 (51%), Gaps = 15/389 (3%)

Query: 150 PDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLV 209
           P+  T+  LI G C+ G L  A+  + +M+    E   +   N+   ++++ SLC+ G +
Sbjct: 1   PNRFTFSVLIAGLCKAGRLGEAVECYNQML----ERHCVP--NLRDINLLLASLCQAGTM 54

Query: 210 DKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEM-LDLGPRPNLLTFNV 268
           D+A  +F   +G   +P+V+    LI+GFC     ++   LF EM  +    P   T+  
Sbjct: 55  DQAMAIF---RGIQCSPSVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTA 111

Query: 269 MIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSM-HSK 327
           +I C CK  ++++A  LLE       + D     S+  G+C   R+D A ++ L M   K
Sbjct: 112 IIKCYCKMDRLDQARQLLEE--SSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKK 169

Query: 328 GCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYA 387
             K  +V++N++I+G+CK   V EA  +   ++S G     +TY TL+ G  ++G    A
Sbjct: 170 SAKPDIVAWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEA 229

Query: 388 QKLFDEM--KLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLI 445
            +LF  +  + ++ EP++ T+N LI GLCK + ++ A +L   ++          +  L+
Sbjct: 230 LQLFKVLSSRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLM 289

Query: 446 DGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCA 505
           DGLCK GR      +F ++ ++G  P+VVTY+ ++H  C+ G L+ A   +  M   G  
Sbjct: 290 DGLCKQGRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIP 349

Query: 506 PNVVTFNTLMHGFLQNNKTSKVVELLHKM 534
           P+V T+  L+ G  +N K     E   K+
Sbjct: 350 PDVTTYTVLLEGLFENGKVRTATEFFEKI 378



 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 122/455 (26%), Positives = 218/455 (47%), Gaps = 20/455 (4%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
           P   +F++L   + K       +  Y +++    +P+   +N+L+         LC    
Sbjct: 1   PNRFTFSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLA-------SLCQAGT 53

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
           + +A  +F+ +      P VIT   LINGFC    L  AL L  +M     E        
Sbjct: 54  MDQAMAIFRGI---QCSPSVITLNILINGFCELQLLDKALELFHEM-----EKNFALVPE 105

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
             +Y+ II   CK   +D+A++L  E      +  V+  T++  GFC A   +E   L +
Sbjct: 106 ATTYTAIIKCYCKMDRLDQARQLLEE--SSCCSSDVIAITSVARGFCKAQRVDEAYQLLL 163

Query: 253 EMLDL-GPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
           +M++    +P+++ +NV+I   CK G++ EA  +LE ++  G  P+  TY +L+DG+C  
Sbjct: 164 DMVEKKSAKPDIVAWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKS 223

Query: 312 GRIDTAREIF--LSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVI 369
           G +  A ++F  LS      +  VV++N LI+G CK   +E A  L +Q+ +  +R    
Sbjct: 224 GNLSEALQLFKVLSSRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTF 283

Query: 370 TYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHML 429
           TY TL+ GL + G+     ++F+EM      P + TY  L+   CK   +Q+A ++   +
Sbjct: 284 TYTTLMDGLCKQGRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSM 343

Query: 430 EMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKL 489
                   +  +  L++GL + G++  A E F K+ ++   P  V YS ++ G C+   +
Sbjct: 344 VAKGIPPDVTTYTVLLEGLFENGKVRTATEFFEKILRERCPPCAVVYSALVRGCCKAALV 403

Query: 490 EKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKT 524
           ++A  + + M     AP+  T   L+    +  +T
Sbjct: 404 DEAVKYYVEMLDRRLAPDPATCKLLVEMLCKRGRT 438



 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 120/446 (26%), Positives = 215/446 (48%), Gaps = 24/446 (5%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CK+G   L EA   +  M      P +   NLL  ++ +    D  ++ +R    I   P
Sbjct: 14  CKAG--RLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGTMDQAMAIFR---GIQCSP 68

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIA-FGVRPDVITYGTLINGFCRTGN 167
             +TLNILIN       G C    + +A  LF  M   F + P+  TY  +I  +C+   
Sbjct: 69  SVITLNILIN-------GFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKCYCKMDR 121

Query: 168 LSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEM-KGRGINP 226
           L  A +L         E      +++ + + +    CK   VD+A +L L+M + +   P
Sbjct: 122 LDQARQL--------LEESSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKP 173

Query: 227 AVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLL 286
            +V    +IHGFC AG   E   +   ++ +G  PN +T+  +ID  CK G ++EA  L 
Sbjct: 174 DIVAWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLF 233

Query: 287 ELMIQRG--LNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYC 344
           +++  R     P+  T+N+L+ G C   R++ A E+   M ++  +    +Y  L++G C
Sbjct: 234 KVLSSRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLC 293

Query: 345 KILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLS 404
           K     E   ++ +++  G   +V+TY TL+    +AG    AQ++   M    + PD++
Sbjct: 294 KQGRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVT 353

Query: 405 TYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKL 464
           TY +L++GL +N  V+ A + F  +   +      +++ L+ G CKA  +D A + + ++
Sbjct: 354 TYTVLLEGLFENGKVRTATEFFEKILRERCPPCAVVYSALVRGCCKAALVDEAVKYYVEM 413

Query: 465 PQKGLVPTVVTYSIMIHGLCRKGKLE 490
             + L P   T  +++  LC++G+ +
Sbjct: 414 LDRRLAPDPATCKLLVEMLCKRGRTD 439



 Score =  132 bits (331), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 76/267 (28%), Positives = 144/267 (53%), Gaps = 7/267 (2%)

Query: 296 PDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSL 355
           P+RFT++ L+ G C  GR+  A E +  M  + C   +   N+L+   C+   +++AM++
Sbjct: 1   PNRFTFSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGTMDQAMAI 60

Query: 356 YRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEM-KLYNVEPDLSTYNILIDGLC 414
           +R I  +    +VIT N L++G  +      A +LF EM K + + P+ +TY  +I   C
Sbjct: 61  FRGIQCS---PSVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKCYC 117

Query: 415 KNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKL-PQKGLVPTV 473
           K + + +A +L    E +     +     +  G CKA R+D A++L   +  +K   P +
Sbjct: 118 KMDRLDQARQLLE--ESSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPDI 175

Query: 474 VTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHK 533
           V ++++IHG C+ G++ +A + L  +   GC PN VT+ TL+ GF ++   S+ ++L   
Sbjct: 176 VAWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKV 235

Query: 534 MAEPERNLVPDDTTFSIVVDLLAKDEK 560
           ++  + +  P+  TF+ ++  L K ++
Sbjct: 236 LSSRDHHAEPNVVTFNALISGLCKADR 262


>gi|255586858|ref|XP_002534039.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223525946|gb|EEF28343.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 634

 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 156/572 (27%), Positives = 267/572 (46%), Gaps = 20/572 (3%)

Query: 10  LFSSETVSKVKLSSLFKSPRQIAAVSSPETQLNEFLHENCKSGIIN---LNEARYFFGYM 66
           +FS   +S  K   + KS   I  +     +LNE    N   G +    +++    F  M
Sbjct: 46  VFSILVLSFSKWGQVDKSFEFIEKMEEQNFRLNEKTFCNLIHGFVKQSRVDKGVQLFYKM 105

Query: 67  THMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERG 126
                SP IS +++L G    N+  D  +S Y ++  + + PD   ++ LI+ F  + + 
Sbjct: 106 QKYGLSPDISLYDVLIGGFCSNKKLDKALSLYAEMKMLKIQPDIGVVSKLISSFPEEGKL 165

Query: 127 LCV-ENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYEN 185
           + + E  +++     + ++   V   ++  G +    C   N+         M +GD ++
Sbjct: 166 IDILEETLEDMNIETQTLLCNSVLSSLVNSGLIDKACCLLRNM---------MGNGDDDD 216

Query: 186 GLIS-------KTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGF 238
                      + N  S+SI+I+ L +   +D A  LF +M   G N  +++   LI+G 
Sbjct: 217 VQYKLFRDEKIRPNTASFSIVINGLMQACKLDLAVCLFQDMAEIGCNRDLLLYNNLINGL 276

Query: 239 CCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDR 298
           C +   EE   L  EM + G +P   T N +  CLCK   ++ A  L++ M   G  P  
Sbjct: 277 CNSDRLEESYKLLKEMEESGFKPTQFTLNSIFGCLCKRQDVSGALDLVKKMRLYGCEPWV 336

Query: 299 FTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQ 358
             Y  L+   C  G+   A      M  +G    +++Y+ L+ G  ++  V++A+ L++ 
Sbjct: 337 KHYTLLVRKLCKHGKAAEASIFLTDMVQEGFPPNIIAYSALLGGLIEVQEVDQALKLFKD 396

Query: 359 IISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNC 418
           I + G    VI YN L+ GL++A +   A+ LF+EM +  + P + TYN+LIDG CKN C
Sbjct: 397 ISARGRCPDVIAYNILMKGLYEAHRTEEARNLFNEMVMKGLIPSVVTYNLLIDGWCKNGC 456

Query: 419 VQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSI 478
           + +A+     +   + E  +  +  LIDGLCKAGR D+A  L++++ ++G  P  V +  
Sbjct: 457 IDDAMNCLCSMSAKEREPNVFTYTTLIDGLCKAGRPDDAVMLWNEMRRRGCRPNRVAFMG 516

Query: 479 MIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPE 538
            IHGLC+  K E A      ME+    P+   + +L+  F+  +      E+L KM +  
Sbjct: 517 FIHGLCKCDKPEAALIHFHEMEEEEMEPDTYVYISLVSAFVNISNFPMAFEILKKMVDRR 576

Query: 539 RNLVPDDTTFSIVVDLLAKDEKYHECSAVSKS 570
               P D    I+ D + K  K    S+  KS
Sbjct: 577 NFPDPLDKNCIIIRDAILKLSKDARTSSSVKS 608



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 100/422 (23%), Positives = 196/422 (46%), Gaps = 21/422 (4%)

Query: 154 TYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAK 213
           T   ++  +C  G    AL +  ++     ++G +   + + +SI++ S  K G VDK+ 
Sbjct: 12  TLTPVLQVYCNAGKFDEALNVFNEI----QDHGWL---DAYVFSILVLSFSKWGQVDKSF 64

Query: 214 ELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCL 273
           E   +M+ +           LIHGF      ++   LF +M   G  P++  ++V+I   
Sbjct: 65  EFIEKMEEQNFRLNEKTFCNLIHGFVKQSRVDKGVQLFYKMQKYGLSPDISLYDVLIGGF 124

Query: 274 CKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRI-----DTAREIFLSMHSKG 328
           C   K+++A  L   M    + PD    + L+  +   G++     +T  ++ +   +  
Sbjct: 125 CSNKKLDKALSLYAEMKMLKIQPDIGVVSKLISSFPEEGKLIDILEETLEDMNIETQTLL 184

Query: 329 CKHTVVSY--NILINGYCKIL-----NVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQA 381
           C   + S   + LI+  C +L     N ++    Y+      +R    +++ +++GL QA
Sbjct: 185 CNSVLSSLVNSGLIDKACCLLRNMMGNGDDDDVQYKLFRDEKIRPNTASFSIVINGLMQA 244

Query: 382 GQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIF 441
            +   A  LF +M       DL  YN LI+GLC ++ ++E+ KL   +E + F+      
Sbjct: 245 CKLDLAVCLFQDMAEIGCNRDLLLYNNLINGLCNSDRLEESYKLLKEMEESGFKPTQFTL 304

Query: 442 NCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEK 501
           N +   LCK   +  A +L  K+   G  P V  Y++++  LC+ GK  +A+ FL  M +
Sbjct: 305 NSIFGCLCKRQDVSGALDLVKKMRLYGCEPWVKHYTLLVRKLCKHGKAAEASIFLTDMVQ 364

Query: 502 NGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKY 561
            G  PN++ ++ L+ G ++  +  + ++L   ++   R   PD   ++I++  L +  + 
Sbjct: 365 EGFPPNIIAYSALLGGLIEVQEVDQALKLFKDIS--ARGRCPDVIAYNILMKGLYEAHRT 422

Query: 562 HE 563
            E
Sbjct: 423 EE 424



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 68/301 (22%), Positives = 133/301 (44%), Gaps = 25/301 (8%)

Query: 254 MLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGR 313
           M D G   +  T   ++   C  GK +EA  +   +   G   D + ++ L+  +   G+
Sbjct: 1   MRDQGLSFSKYTLTPVLQVYCNAGKFDEALNVFNEIQDHGW-LDAYVFSILVLSFSKWGQ 59

Query: 314 IDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNT 373
           +D + E    M  +  +    ++  LI+G+ K   V++ + L+ ++   G+   +  Y+ 
Sbjct: 60  VDKSFEFIEKMEEQNFRLNEKTFCNLIHGFVKQSRVDKGVQLFYKMQKYGLSPDISLYDV 119

Query: 374 LLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNK 433
           L+ G     +   A  L+ EMK+  ++PD+   + LI          E  KL  +LE   
Sbjct: 120 LIGGFCSNKKLDKALSLYAEMKMLKIQPDIGVVSKLISSF------PEEGKLIDILEETL 173

Query: 434 FEFGIE----IFNCLIDGLCKAGRLDNAWELFHKLPQKG--------------LVPTVVT 475
            +  IE    + N ++  L  +G +D A  L   +   G              + P   +
Sbjct: 174 EDMNIETQTLLCNSVLSSLVNSGLIDKACCLLRNMMGNGDDDDVQYKLFRDEKIRPNTAS 233

Query: 476 YSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMA 535
           +SI+I+GL +  KL+ A      M + GC  +++ +N L++G   +++  +  +LL +M 
Sbjct: 234 FSIVINGLMQACKLDLAVCLFQDMAEIGCNRDLLLYNNLINGLCNSDRLEESYKLLKEME 293

Query: 536 E 536
           E
Sbjct: 294 E 294


>gi|414591138|tpg|DAA41709.1| TPA: hypothetical protein ZEAMMB73_028111 [Zea mays]
          Length = 583

 Score =  202 bits (515), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 124/400 (31%), Positives = 207/400 (51%), Gaps = 10/400 (2%)

Query: 126 GLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYEN 185
           GLC   R+ +A  L  +M   GV  + + Y +L++ + R  +      + + M     EN
Sbjct: 186 GLCKSGRVDDARRLLDDMPRHGVSLNALCYNSLLDCYVRQKDDGRVQEILEIM-----EN 240

Query: 186 GLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWE 245
             I  T + +Y+I++DSL     + K + LF EMK   +   V + T +I+ +C AGN  
Sbjct: 241 EGIEAT-VGTYTILVDSLSTARDISKVEALFNEMKANNVVGDVYLYTAVINAYCRAGNMR 299

Query: 246 EVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLM 305
               +  E +  G  PN  T+ V+I+  CK G++  A  LL  M  +G+  ++  +N+++
Sbjct: 300 RAAKVLDECVGNGVEPNERTYGVLINGFCKIGQMEAAEMLLADMQGQGVGLNQIIFNTMI 359

Query: 306 DGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVR 365
           DGYC  G +D A +I  +M   G +  + +YN L  G C++  ++EA +L   +I  GV 
Sbjct: 360 DGYCRKGMVDDALKIKAAMEKMGVELDIYTYNTLACGLCRVNRLDEAKTLLHIMIEMGVV 419

Query: 366 QTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKL 425
              +TY TL+S   + G    A++LF EM      P + TYN++IDG  K   ++EA + 
Sbjct: 420 PNYVTYTTLISIHCKDGDMVEARRLFREMAEKGATPSVVTYNVMIDGYTKKGSIREAERF 479

Query: 426 FHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCR 485
              +E   F   +  +  L+ G C  G++D A +LF ++ Q+G  P VV Y+ +I GL +
Sbjct: 480 RKEMEKKGFVPDVYTYASLVHGHCVNGKVDVALKLFEEMKQRGTEPNVVAYTALISGLAK 539

Query: 486 KGKLEKANDFLLY--MEKNGCAPNVVTFNTLMHGFLQNNK 523
           +G+ E A  F LY  M K G  P+   ++ L+     +N+
Sbjct: 540 EGRSEAA--FQLYDDMLKAGLIPDDSLYSALVGSLHTDNR 577



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 115/432 (26%), Positives = 206/432 (47%), Gaps = 13/432 (3%)

Query: 132 RIKEATWLFKNMIAFGVRPDVIT---YGTLINGFCRTGNLSVALRLHKKMVSGDYENGLI 188
           R+ +A  L +   A G  P  ++      +++G C++G +  A RL   M      +G+ 
Sbjct: 156 RLADAAGLLER--ALGSCPGSVSPLAASVVVDGLCKSGRVDDARRLLDDMP----RHGV- 208

Query: 189 SKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVN 248
              N   Y+ ++D   ++    + +E+   M+  GI   V   T L+     A +  +V 
Sbjct: 209 -SLNALCYNSLLDCYVRQKDDGRVQEILEIMENEGIEATVGTYTILVDSLSTARDISKVE 267

Query: 249 GLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGY 308
            LF EM       ++  +  +I+  C+ G +  A  +L+  +  G+ P+  TY  L++G+
Sbjct: 268 ALFNEMKANNVVGDVYLYTAVINAYCRAGNMRRAAKVLDECVGNGVEPNERTYGVLINGF 327

Query: 309 CLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTV 368
           C +G+++ A  +   M  +G     + +N +I+GYC+   V++A+ +   +   GV   +
Sbjct: 328 CKIGQMEAAEMLLADMQGQGVGLNQIIFNTMIDGYCRKGMVDDALKIKAAMEKMGVELDI 387

Query: 369 ITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHM 428
            TYNTL  GL +  +   A+ L   M    V P+  TY  LI   CK+  + EA +LF  
Sbjct: 388 YTYNTLACGLCRVNRLDEAKTLLHIMIEMGVVPNYVTYTTLISIHCKDGDMVEARRLFRE 447

Query: 429 LEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGK 488
           +        +  +N +IDG  K G +  A     ++ +KG VP V TY+ ++HG C  GK
Sbjct: 448 MAEKGATPSVVTYNVMIDGYTKKGSIREAERFRKEMEKKGFVPDVYTYASLVHGHCVNGK 507

Query: 489 LEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTF 548
           ++ A      M++ G  PNVV +  L+ G  +  ++    +L   M +    L+PDD+ +
Sbjct: 508 VDVALKLFEEMKQRGTEPNVVAYTALISGLAKEGRSEAAFQLYDDMLKA--GLIPDDSLY 565

Query: 549 SIVVDLLAKDEK 560
           S +V  L  D +
Sbjct: 566 SALVGSLHTDNR 577



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 92/277 (33%), Positives = 142/277 (51%), Gaps = 13/277 (4%)

Query: 102 VSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLING 161
           V  G+ P+  T  +LIN       G C   +++ A  L  +M   GV  + I + T+I+G
Sbjct: 309 VGNGVEPNERTYGVLIN-------GFCKIGQMEAAEMLLADMQGQGVGLNQIIFNTMIDG 361

Query: 162 FCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKG 221
           +CR G +  AL++   M     E       +I++Y+ +   LC+   +D+AK L   M  
Sbjct: 362 YCRKGMVDDALKIKAAMEKMGVE------LDIYTYNTLACGLCRVNRLDEAKTLLHIMIE 415

Query: 222 RGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINE 281
            G+ P  V  TTLI   C  G+  E   LF EM + G  P+++T+NVMID   K G I E
Sbjct: 416 MGVVPNYVTYTTLISIHCKDGDMVEARRLFREMAEKGATPSVVTYNVMIDGYTKKGSIRE 475

Query: 282 ANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILIN 341
           A    + M ++G  PD +TY SL+ G+C+ G++D A ++F  M  +G +  VV+Y  LI+
Sbjct: 476 AERFRKEMEKKGFVPDVYTYASLVHGHCVNGKVDVALKLFEEMKQRGTEPNVVAYTALIS 535

Query: 342 GYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGL 378
           G  K    E A  LY  ++  G+      Y+ L+  L
Sbjct: 536 GLAKEGRSEAAFQLYDDMLKAGLIPDDSLYSALVGSL 572


>gi|297743431|emb|CBI36298.3| unnamed protein product [Vitis vinifera]
          Length = 641

 Score =  202 bits (515), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 141/492 (28%), Positives = 244/492 (49%), Gaps = 24/492 (4%)

Query: 62  FFGYMTHMQPSPPISSF--NLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINC 119
           FF +++  Q S PI+ F  + L   +A++R +  +      +    + P    ++I+I  
Sbjct: 79  FFDWVSRGQYSGPINGFAYSSLLKLLARSRVFSEMEVVLENMRVEEMSPTREAMSIVIQA 138

Query: 120 FGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMV 179
           + +   GL VE  ++   ++ K    F   PDVI   +L+N   + G + +A +    MV
Sbjct: 139 YSDS--GL-VEKALELYYFVLKTYTYF---PDVIACNSLLNMLVKLGRIEIARKFTCIMV 192

Query: 180 SGDYENGLISK--------------TNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGIN 225
            G  + G + +               NI  Y+ +ID  CK+G ++ A  LF+E+K +G  
Sbjct: 193 KGLCKEGKLEEGRKLIEDRWGQGCIPNIIFYNTLIDGYCKKGDMEMANGLFIELKLKGFL 252

Query: 226 PAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGL 285
           P V     +I+GFC  G+++ ++ L +EM   G   N+  +N +ID   K G I +A   
Sbjct: 253 PTVETYGAIINGFCKKGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAVET 312

Query: 286 LELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCK 345
           +E MI+ G  PD  TYN+L+ G C  G++  A ++      KG      SY  LI+ YCK
Sbjct: 313 IEGMIECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCK 372

Query: 346 ILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLST 405
               + A +   ++   G +  ++TY  L+ GL  AG+   A  + ++M    V PD   
Sbjct: 373 QGGYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFPDAGI 432

Query: 406 YNILIDGLCKNNCVQEA-VKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKL 464
           YNIL+ GLCK   +  A + L  ML+ +       ++  L+DG  + G LD A +LF   
Sbjct: 433 YNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAF-VYATLVDGFIRNGNLDEARKLFELT 491

Query: 465 PQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKT 524
            +KG+ P +V Y+ MI G C+ G ++ A   +  M+K   AP+  T++T++ G+++ +  
Sbjct: 492 IEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQHDL 551

Query: 525 SKVVELLHKMAE 536
               ++  +M +
Sbjct: 552 DGAQKMFREMVK 563



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 131/459 (28%), Positives = 221/459 (48%), Gaps = 34/459 (7%)

Query: 72  SPPISSFNLLFGAVAKNRHYDAVIS-FYRKLVSIGLLPDFLTLNILINCF---GNKE--- 124
           SP   + +++  A + +   +  +  +Y  L +    PD +  N L+N     G  E   
Sbjct: 126 SPTREAMSIVIQAYSDSGLVEKALELYYFVLKTYTYFPDVIACNSLLNMLVKLGRIEIAR 185

Query: 125 -------RGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKK 177
                  +GLC E +++E   L ++    G  P++I Y TLI+G+C+ G++ +A      
Sbjct: 186 KFTCIMVKGLCKEGKLEEGRKLIEDRWGQGCIPNIIFYNTLIDGYCKKGDMEMA------ 239

Query: 178 MVSGDYENGLISK-------TNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVV 230
                  NGL  +         + +Y  II+  CK+G       L +EM  RG+   V V
Sbjct: 240 -------NGLFIELKLKGFLPTVETYGAIINGFCKKGDFKAIDRLLMEMNSRGLTVNVQV 292

Query: 231 CTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMI 290
             T+I      G+  +       M++ G +P+++T+N +I   C+ GK++EA+ LLE  +
Sbjct: 293 YNTIIDARYKHGHIVKAVETIEGMIECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQAL 352

Query: 291 QRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVE 350
            +GL P++F+Y  L+  YC  G  D A    + M  +G K  +V+Y  L++G      V+
Sbjct: 353 GKGLMPNKFSYTPLIHAYCKQGGYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVD 412

Query: 351 EAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILI 410
            A+++  +++  GV      YN L+SGL +  +   A+ L  EM   +V PD   Y  L+
Sbjct: 413 VALTIREKMLERGVFPDAGIYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLV 472

Query: 411 DGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLV 470
           DG  +N  + EA KLF +        GI  +N +I G CK G + +A    +++ ++ L 
Sbjct: 473 DGFIRNGNLDEARKLFELTIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLA 532

Query: 471 PTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVV 509
           P   TYS +I G  ++  L+ A      M K  C PNV+
Sbjct: 533 PDEFTYSTVIDGYVKQHDLDGAQKMFREMVKMKCKPNVM 571



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 109/413 (26%), Positives = 183/413 (44%), Gaps = 54/413 (13%)

Query: 195 SYSIIIDSLCKEGLVDKAKELF-LEMKGRGINPAVVVCTTL------------------- 234
           + SI+I +    GLV+KA EL+   +K     P V+ C +L                   
Sbjct: 131 AMSIVIQAYSDSGLVEKALELYYFVLKTYTYFPDVIACNSLLNMLVKLGRIEIARKFTCI 190

Query: 235 -IHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRG 293
            + G C  G  EE   L  +    G  PN++ +N +ID  CK G +  ANGL   +  +G
Sbjct: 191 MVKGLCKEGKLEEGRKLIEDRWGQGCIPNIIFYNTLIDGYCKKGDMEMANGLFIELKLKG 250

Query: 294 LNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAM 353
             P   TY ++++G+C  G       + + M+S+G    V  YN +I+   K  ++ +A+
Sbjct: 251 FLPTVETYGAIINGFCKKGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAV 310

Query: 354 SLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGL 413
                +I  G +  ++TYNTL+SG  + G+   A +L ++     + P+  +Y  LI   
Sbjct: 311 ETIEGMIECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAY 370

Query: 414 CKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTV 473
           CK      A      +     +  +  +  L+ GL  AG +D A  +  K+ ++G+ P  
Sbjct: 371 CKQGGYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFPDA 430

Query: 474 VTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQN---NKTSKVVEL 530
             Y+I++ GLC+K KL  A   L  M      P+   + TL+ GF++N   ++  K+ EL
Sbjct: 431 GIYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFEL 490

Query: 531 -LHKMAEP-----------------------------ERNLVPDDTTFSIVVD 553
            + K   P                             +R+L PD+ T+S V+D
Sbjct: 491 TIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVID 543



 Score =  139 bits (349), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 96/398 (24%), Positives = 191/398 (47%), Gaps = 22/398 (5%)

Query: 164 RTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRG 223
           R  ++ + L+    +  G Y   +    N F+YS ++  L +  +  + + +   M+   
Sbjct: 69  RIRDVELGLKFFDWVSRGQYSGPI----NGFAYSSLLKLLARSRVFSEMEVVLENMRVEE 124

Query: 224 INPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPR-PNLLTFNVMIDCLCKGGKINEA 282
           ++P     + +I  +  +G  E+   L+  +L      P+++  N +++ L K G+I  A
Sbjct: 125 MSPTREAMSIVIQAYSDSGLVEKALELYYFVLKTYTYFPDVIACNSLLNMLVKLGRIEIA 184

Query: 283 NGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILING 342
                +M++               G C  G+++  R++      +GC   ++ YN LI+G
Sbjct: 185 RKFTCIMVK---------------GLCKEGKLEEGRKLIEDRWGQGCIPNIIFYNTLIDG 229

Query: 343 YCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPD 402
           YCK  ++E A  L+ ++   G   TV TY  +++G  + G      +L  EM    +  +
Sbjct: 230 YCKKGDMEMANGLFIELKLKGFLPTVETYGAIINGFCKKGDFKAIDRLLMEMNSRGLTVN 289

Query: 403 LSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFH 462
           +  YN +ID   K+  + +AV+    +     +  I  +N LI G C+ G++  A +L  
Sbjct: 290 VQVYNTIIDARYKHGHIVKAVETIEGMIECGCKPDIVTYNTLISGSCRDGKVSEADQLLE 349

Query: 463 KLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNN 522
           +   KGL+P   +Y+ +IH  C++G  ++A+++L+ M + G  P++VT+  L+HG +   
Sbjct: 350 QALGKGLMPNKFSYTPLIHAYCKQGGYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAG 409

Query: 523 KTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEK 560
           +    + +  KM   ER + PD   ++I++  L K  K
Sbjct: 410 EVDVALTIREKML--ERGVFPDAGIYNILMSGLCKKFK 445


>gi|449446855|ref|XP_004141186.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g55840-like [Cucumis sativus]
          Length = 1079

 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 141/502 (28%), Positives = 245/502 (48%), Gaps = 20/502 (3%)

Query: 66  MTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKER 125
           M +   +P   S+N L     K          + +++ + L P+ +T NILIN       
Sbjct: 271 MRNKMITPNEVSYNTLINGFVKEGKIGVATRVFNEMIELNLSPNLITYNILIN------- 323

Query: 126 GLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYEN 185
           G C+    +EA  +   M A  VRP+ +T GTL+NG  ++    VA  +         E 
Sbjct: 324 GYCINGNFEEALRVLDVMEANDVRPNEVTIGTLLNGLYKSAKFDVARNI--------LER 375

Query: 186 GLISKT--NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGN 243
             I++T  N  S++++ID LC+ GL+D+A +L +EM   G++P ++  + LI+GFC  GN
Sbjct: 376 YCINRTSLNCISHTVMIDGLCRNGLLDEAFQLLIEMCKDGVHPDIITFSVLINGFCKVGN 435

Query: 244 WEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNS 303
             +   +  ++   G  PN + F+ +I   CK G + EA      M   G N D FT NS
Sbjct: 436 INKAKEVMSKIYREGFVPNNVIFSTLIYNSCKVGNVYEAMKFYAAMNLNGQNADNFTCNS 495

Query: 304 LMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNG 363
           L+   C  G++  A E    +   G     V+++ +INGY  + +   A S++ ++IS G
Sbjct: 496 LVASLCENGKLVEAEEFLHHISRIGLVPNSVTFDCIINGYANVGDGSGAFSVFDRMISCG 555

Query: 364 VRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAV 423
              +  TY +LL  L +      A+KL  ++    +  D  +YN LI  + K+  + EAV
Sbjct: 556 HHPSPFTYGSLLKVLCKGQNFWEARKLLKKLHCIPLAVDTISYNTLIVEISKSGNLLEAV 615

Query: 424 KLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVP-TVVTYSIMIHG 482
           +LF  +  N        + C++ GL + GRL  A+    +L QK ++    + Y+  I G
Sbjct: 616 RLFEEMIQNNILPDSYTYTCILSGLIREGRLVCAFIFLGRLMQKEILTLNSIVYTCFIDG 675

Query: 483 LCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLV 542
           L + G+ + A      ME+ G + +++  N++  G+ +  K      L+ K     +N++
Sbjct: 676 LFKAGQSKAALYLFKEMEEKGLSLDLIALNSITDGYSRMGKVFSASSLISK--TRNKNVI 733

Query: 543 PDDTTFSIVVDLLAKDEKYHEC 564
           P+ TTF+I++   ++ +    C
Sbjct: 734 PNLTTFNILLHGYSRGQDIMSC 755



 Score =  184 bits (468), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 116/424 (27%), Positives = 212/424 (50%), Gaps = 8/424 (1%)

Query: 130 ENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLIS 189
           +  +  A   F +M+  G +P V T   ++    +     +     K+M++         
Sbjct: 118 QGMVGHAVNTFSSMLIRGFKPSVYTCNMIMASMVKNCRAHLVWSFFKQMLTSRV------ 171

Query: 190 KTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNG 249
             N+ S++I+I  LC +G + KA  +   M+  G  P +V   TL+   C  G ++    
Sbjct: 172 CPNVSSFNILISVLCVQGKLKKAVNILTMMERNGYVPTIVSYNTLLSWCCKKGRFKFALV 231

Query: 250 LFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYC 309
           L   M   G + ++ T+N+ ID LC+  +  +   +L+ M  + + P+  +YN+L++G+ 
Sbjct: 232 LIHHMECKGIQADVCTYNMFIDSLCRNSRSAQGYLVLKKMRNKMITPNEVSYNTLINGFV 291

Query: 310 LVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVI 369
             G+I  A  +F  M        +++YNILINGYC   N EEA+ +   + +N VR   +
Sbjct: 292 KEGKIGVATRVFNEMIELNLSPNLITYNILINGYCINGNFEEALRVLDVMEANDVRPNEV 351

Query: 370 TYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHML 429
           T  TLL+GL+++ +   A+ + +   +     +  ++ ++IDGLC+N  + EA +L   +
Sbjct: 352 TIGTLLNGLYKSAKFDVARNILERYCINRTSLNCISHTVMIDGLCRNGLLDEAFQLLIEM 411

Query: 430 EMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKL 489
             +     I  F+ LI+G CK G ++ A E+  K+ ++G VP  V +S +I+  C+ G +
Sbjct: 412 CKDGVHPDIITFSVLINGFCKVGNINKAKEVMSKIYREGFVPNNVIFSTLIYNSCKVGNV 471

Query: 490 EKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFS 549
            +A  F   M  NG   +  T N+L+    +N K  +  E LH ++     LVP+  TF 
Sbjct: 472 YEAMKFYAAMNLNGQNADNFTCNSLVASLCENGKLVEAEEFLHHISRI--GLVPNSVTFD 529

Query: 550 IVVD 553
            +++
Sbjct: 530 CIIN 533



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 126/523 (24%), Positives = 240/523 (45%), Gaps = 50/523 (9%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
           P + + N++  ++ KN     V SF++++++  + P+  + NILI+        LCV+ +
Sbjct: 138 PSVYTCNMIMASMVKNCRAHLVWSFFKQMLTSRVCPNVSSFNILISV-------LCVQGK 190

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
           +K+A  +   M   G  P +++Y TL++  C+ G    AL L   M     +       +
Sbjct: 191 LKKAVNILTMMERNGYVPTIVSYNTLLSWCCKKGRFKFALVLIHHMECKGIQ------AD 244

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
           + +Y++ IDSLC+     +   +  +M+ + I P  V   TLI+GF   G       +F 
Sbjct: 245 VCTYNMFIDSLCRNSRSAQGYLVLKKMRNKMITPNEVSYNTLINGFVKEGKIGVATRVFN 304

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLM------- 305
           EM++L   PNL+T+N++I+  C  G   EA  +L++M    + P+  T  +L+       
Sbjct: 305 EMIELNLSPNLITYNILINGYCINGNFEEALRVLDVMEANDVRPNEVTIGTLLNGLYKSA 364

Query: 306 ----------------------------DGYCLVGRIDTAREIFLSMHSKGCKHTVVSYN 337
                                       DG C  G +D A ++ + M   G    +++++
Sbjct: 365 KFDVARNILERYCINRTSLNCISHTVMIDGLCRNGLLDEAFQLLIEMCKDGVHPDIITFS 424

Query: 338 ILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLY 397
           +LING+CK+ N+ +A  +  +I   G     + ++TL+    + G    A K +  M L 
Sbjct: 425 VLINGFCKVGNINKAKEVMSKIYREGFVPNNVIFSTLIYNSCKVGNVYEAMKFYAAMNLN 484

Query: 398 NVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNA 457
               D  T N L+  LC+N  + EA +  H +           F+C+I+G    G    A
Sbjct: 485 GQNADNFTCNSLVASLCENGKLVEAEEFLHHISRIGLVPNSVTFDCIINGYANVGDGSGA 544

Query: 458 WELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHG 517
           + +F ++   G  P+  TY  ++  LC+     +A   L  +     A + +++NTL+  
Sbjct: 545 FSVFDRMISCGHHPSPFTYGSLLKVLCKGQNFWEARKLLKKLHCIPLAVDTISYNTLIVE 604

Query: 518 FLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEK 560
             ++    + V L  +M   + N++PD  T++ ++  L ++ +
Sbjct: 605 ISKSGNLLEAVRLFEEMI--QNNILPDSYTYTCILSGLIREGR 645



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 103/357 (28%), Positives = 186/357 (52%), Gaps = 2/357 (0%)

Query: 196 YSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEML 255
           + ++I    ++G+V  A   F  M  RG  P+V  C  ++           V   F +ML
Sbjct: 108 FDLLIRVYLRQGMVGHAVNTFSSMLIRGFKPSVYTCNMIMASMVKNCRAHLVWSFFKQML 167

Query: 256 DLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRID 315
                PN+ +FN++I  LC  GK+ +A  +L +M + G  P   +YN+L+   C  GR  
Sbjct: 168 TSRVCPNVSSFNILISVLCVQGKLKKAVNILTMMERNGYVPTIVSYNTLLSWCCKKGRFK 227

Query: 316 TAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLL 375
            A  +   M  KG +  V +YN+ I+  C+     +   + +++ +  +    ++YNTL+
Sbjct: 228 FALVLIHHMECKGIQADVCTYNMFIDSLCRNSRSAQGYLVLKKMRNKMITPNEVSYNTLI 287

Query: 376 SGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFE 435
           +G  + G+ G A ++F+EM   N+ P+L TYNILI+G C N   +EA+++  ++E N   
Sbjct: 288 NGFVKEGKIGVATRVFNEMIELNLSPNLITYNILINGYCINGNFEEALRVLDVMEANDVR 347

Query: 436 FGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDF 495
                   L++GL K+ + D A  +  +          +++++MI GLCR G L++A   
Sbjct: 348 PNEVTIGTLLNGLYKSAKFDVARNILERYCINRTSLNCISHTVMIDGLCRNGLLDEAFQL 407

Query: 496 LLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVV 552
           L+ M K+G  P+++TF+ L++GF +    +K  E++ K+       VP++  FS ++
Sbjct: 408 LIEMCKDGVHPDIITFSVLINGFCKVGNINKAKEVMSKIY--REGFVPNNVIFSTLI 462



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 125/524 (23%), Positives = 231/524 (44%), Gaps = 24/524 (4%)

Query: 44  FLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVS 103
            ++ +CK G  N+ EA  F+  M     +    + N L  ++ +N        F   +  
Sbjct: 461 LIYNSCKVG--NVYEAMKFYAAMNLNGQNADNFTCNSLVASLCENGKLVEAEEFLHHISR 518

Query: 104 IGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFC 163
           IGL+P+ +T + +IN + N   G         A  +F  MI+ G  P   TYG+L+   C
Sbjct: 519 IGLVPNSVTFDCIINGYANVGDG-------SGAFSVFDRMISCGHHPSPFTYGSLLKVLC 571

Query: 164 RTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRG 223
           +  N   A +L KK+      + +    +  SY+ +I  + K G + +A  LF EM    
Sbjct: 572 KGQNFWEARKLLKKL------HCIPLAVDTISYNTLIVEISKSGNLLEAVRLFEEMIQNN 625

Query: 224 INPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRP----NLLTFNVMIDCLCKGGKI 279
           I P     T ++ G    G    +   FI +  L  +     N + +   ID L K G+ 
Sbjct: 626 ILPDSYTYTCILSGLIREG---RLVCAFIFLGRLMQKEILTLNSIVYTCFIDGLFKAGQS 682

Query: 280 NEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNIL 339
             A  L + M ++GL+ D    NS+ DGY  +G++ +A  +     +K     + ++NIL
Sbjct: 683 KAALYLFKEMEEKGLSLDLIALNSITDGYSRMGKVFSASSLISKTRNKNVIPNLTTFNIL 742

Query: 340 INGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNV 399
           ++GY +  ++     LY  +  +G     +TY++L+ GL   G      K+       + 
Sbjct: 743 LHGYSRGQDIMSCFKLYNLMRRSGFFPNRLTYHSLILGLCNHGMLELGIKMLKMFIAESS 802

Query: 400 EPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWE 459
             D  T+N+LI   C+ N + + + L H +E+ +     +    + D L +     N + 
Sbjct: 803 TIDDLTFNMLIRKCCEINDLDKVIDLTHNMEVFRVSLDKDTQKAVTDVLVRRMVSQNYFV 862

Query: 460 LFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFL 519
             H++ +KG +PT   Y  M+  +CR G ++ A      M   G + +      ++ G  
Sbjct: 863 FMHEMLKKGFIPTSKQYCTMMKRMCRVGDIQGAFKLKDQMVALGISLDDAAECAMVRGLA 922

Query: 520 QNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
              K  + + +L +M   ++  +P  +TF+ ++ +  K + + E
Sbjct: 923 LCGKIEEAMWILQRMLRMKK--IPTTSTFTTLMHVFCKKDNFKE 964



 Score =  125 bits (315), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 120/582 (20%), Positives = 246/582 (42%), Gaps = 46/582 (7%)

Query: 10   LFSSETVSKVKLSSLFKSPRQIAAVS-----SPETQLNEFLHENCKSGIINLNEARYFFG 64
            +FS+   +  K+ +++++ +  AA++     +     N  +   C++G   L EA  F  
Sbjct: 457  IFSTLIYNSCKVGNVYEAMKFYAAMNLNGQNADNFTCNSLVASLCENG--KLVEAEEFLH 514

Query: 65   YMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKE 124
            +++ +   P   +F+ +    A         S + +++S G  P   T       +G+  
Sbjct: 515  HISRIGLVPNSVTFDCIINGYANVGDGSGAFSVFDRMISCGHHPSPFT-------YGSLL 567

Query: 125  RGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYE 184
            + LC      EA  L K +    +  D I+Y TLI    ++GNL  A+RL ++M+  +  
Sbjct: 568  KVLCKGQNFWEARKLLKKLHCIPLAVDTISYNTLIVEISKSGNLLEAVRLFEEMIQNNIL 627

Query: 185  ----------NGLISK--------------------TNIFSYSIIIDSLCKEGLVDKAKE 214
                      +GLI +                     N   Y+  ID L K G    A  
Sbjct: 628  PDSYTYTCILSGLIREGRLVCAFIFLGRLMQKEILTLNSIVYTCFIDGLFKAGQSKAALY 687

Query: 215  LFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLC 274
            LF EM+ +G++  ++   ++  G+   G     + L  +  +    PNL TFN+++    
Sbjct: 688  LFKEMEEKGLSLDLIALNSITDGYSRMGKVFSASSLISKTRNKNVIPNLTTFNILLHGYS 747

Query: 275  KGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVV 334
            +G  I     L  LM + G  P+R TY+SL+ G C  G ++   ++     ++      +
Sbjct: 748  RGQDIMSCFKLYNLMRRSGFFPNRLTYHSLILGLCNHGMLELGIKMLKMFIAESSTIDDL 807

Query: 335  SYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEM 394
            ++N+LI   C+I ++++ + L   +    V     T   +   L +   +        EM
Sbjct: 808  TFNMLIRKCCEINDLDKVIDLTHNMEVFRVSLDKDTQKAVTDVLVRRMVSQNYFVFMHEM 867

Query: 395  KLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRL 454
                  P    Y  ++  +C+   +Q A KL   +              ++ GL   G++
Sbjct: 868  LKKGFIPTSKQYCTMMKRMCRVGDIQGAFKLKDQMVALGISLDDAAECAMVRGLALCGKI 927

Query: 455  DNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTL 514
            + A  +  ++ +   +PT  T++ ++H  C+K   ++A++  + ME      ++V +N L
Sbjct: 928  EEAMWILQRMLRMKKIPTTSTFTTLMHVFCKKDNFKEAHNLKILMEHYRVKLDIVAYNVL 987

Query: 515  MHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLA 556
            +     N      ++   ++   ++ L+P+ TT+ ++V  ++
Sbjct: 988  ISACCANGDVITALDFYEEI--KQKGLLPNMTTYRVLVSAIS 1027



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 98/364 (26%), Positives = 166/364 (45%), Gaps = 41/364 (11%)

Query: 248 NGLFIEMLDLGP--RPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLM 305
           N LF  ++D  P    N   F+++I    + G +  A      M+ RG  P  +T N +M
Sbjct: 88  NFLFGVLMDTYPLCSSNPAVFDLLIRVYLRQGMVGHAVNTFSSMLIRGFKPSVYTCNMIM 147

Query: 306 DGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVR 365
                  R       F  M +      V S+NILI+  C    +++A+++   +  NG  
Sbjct: 148 ASMVKNCRAHLVWSFFKQMLTSRVCPNVSSFNILISVLCVQGKLKKAVNILTMMERNGYV 207

Query: 366 QTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKL 425
            T+++YNTLLS   + G+  +A  L   M+   ++ D+ TYN+ ID LC+N+   +   +
Sbjct: 208 PTIVSYNTLLSWCCKKGRFKFALVLIHHMECKGIQADVCTYNMFIDSLCRNSRSAQGYLV 267

Query: 426 FHMLEMNKFEFGIEI-FNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLC 484
              +  NK     E+ +N LI+G  K G++  A  +F+++ +  L P ++TY+I+I+G C
Sbjct: 268 LKKMR-NKMITPNEVSYNTLINGFVKEGKIGVATRVFNEMIELNLSPNLITYNILINGYC 326

Query: 485 RKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQN---------------NKTS---- 525
             G  E+A   L  ME N   PN VT  TL++G  ++               N+TS    
Sbjct: 327 INGNFEEALRVLDVMEANDVRPNEVTIGTLLNGLYKSAKFDVARNILERYCINRTSLNCI 386

Query: 526 ----------------KVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSK 569
                           +  +LL +M +    + PD  TFS++++   K    ++   V  
Sbjct: 387 SHTVMIDGLCRNGLLDEAFQLLIEMCKD--GVHPDIITFSVLINGFCKVGNINKAKEVMS 444

Query: 570 SSYR 573
             YR
Sbjct: 445 KIYR 448



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 86/340 (25%), Positives = 148/340 (43%), Gaps = 42/340 (12%)

Query: 235 IHGFCCAGNWEEVNGLFIEMLDLGP-------------------RPNLLT--FNVMIDCL 273
           I+     G WE +N +  +   L P                    PN LT    +    L
Sbjct: 5   IYTILTIGRWESLNHMNYKFASLRPIHGVLALKFLKWVIKQPGLEPNHLTHILGITTHVL 64

Query: 274 CKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTV 333
            K      A  +L+ + Q+  +   F +  LMD Y L                  C    
Sbjct: 65  VKARLYGYAKSILKHLAQKN-SGSNFLFGVLMDTYPL------------------CSSNP 105

Query: 334 VSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDE 393
             +++LI  Y +   V  A++ +  ++  G + +V T N +++ + +  +A      F +
Sbjct: 106 AVFDLLIRVYLRQGMVGHAVNTFSSMLIRGFKPSVYTCNMIMASMVKNCRAHLVWSFFKQ 165

Query: 394 MKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGR 453
           M    V P++S++NILI  LC    +++AV +  M+E N +   I  +N L+   CK GR
Sbjct: 166 MLTSRVCPNVSSFNILISVLCVQGKLKKAVNILTMMERNGYVPTIVSYNTLLSWCCKKGR 225

Query: 454 LDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNT 513
              A  L H +  KG+   V TY++ I  LCR  +  +    L  M      PN V++NT
Sbjct: 226 FKFALVLIHHMECKGIQADVCTYNMFIDSLCRNSRSAQGYLVLKKMRNKMITPNEVSYNT 285

Query: 514 LMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
           L++GF++  K      + ++M   E NL P+  T++I+++
Sbjct: 286 LINGFVKEGKIGVATRVFNEMI--ELNLSPNLITYNILIN 323



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 109/501 (21%), Positives = 191/501 (38%), Gaps = 114/501 (22%)

Query: 42   NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
            N  + E  KSG  NL EA   F  M      P   ++  +   + +         F  +L
Sbjct: 599  NTLIVEISKSG--NLLEAVRLFEEMIQNNILPDSYTYTCILSGLIREGRLVCAFIFLGRL 656

Query: 102  VSIGLLPDFLTLN-ILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLIN 160
            +      + LTLN I+  CF +   GL    + K A +LFK M   G+  D+I   ++ +
Sbjct: 657  MQ----KEILTLNSIVYTCFID---GLFKAGQSKAALYLFKEMEEKGLSLDLIALNSITD 709

Query: 161  GFCRTGNLSVALRLHKKMVSGDYENGLISKT-------NIFSYSIIIDSLCKEGLVDKAK 213
            G+ R G +  A             + LISKT       N+ +++I++    +   +    
Sbjct: 710  GYSRMGKVFSA-------------SSLISKTRNKNVIPNLTTFNILLHGYSRGQDIMSCF 756

Query: 214  ELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDL----GPRPNLLTFNVM 269
            +L+  M+  G  P  +   +LI G C  G  E    L I+ML +        + LTFN++
Sbjct: 757  KLYNLMRRSGFFPNRLTYHSLILGLCNHGMLE----LGIKMLKMFIAESSTIDDLTFNML 812

Query: 270  IDCLCKGGKINEANGLLEL--------------------------------------MIQ 291
            I   C+   IN+ + +++L                                      M++
Sbjct: 813  IRKCCE---INDLDKVIDLTHNMEVFRVSLDKDTQKAVTDVLVRRMVSQNYFVFMHEMLK 869

Query: 292  RGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEE 351
            +G  P    Y ++M   C VG I  A ++   M + G      +   ++ G      +EE
Sbjct: 870  KGFIPTSKQYCTMMKRMCRVGDIQGAFKLKDQMVALGISLDDAAECAMVRGLALCGKIEE 929

Query: 352  AMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILID 411
            AM + ++++      T  T+ TL+    +      A  L   M+ Y V+ D+  YN+LI 
Sbjct: 930  AMWILQRMLRMKKIPTTSTFTTLMHVFCKKDNFKEAHNLKILMEHYRVKLDIVAYNVLIS 989

Query: 412  GLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVP 471
              C N                                   G +  A + + ++ QKGL+P
Sbjct: 990  ACCAN-----------------------------------GDVITALDFYEEIKQKGLLP 1014

Query: 472  TVVTYSIMIHGLCRKGKLEKA 492
             + TY +++  +  K  + + 
Sbjct: 1015 NMTTYRVLVSAISTKHYVSRG 1035


>gi|357111163|ref|XP_003557384.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g41720-like [Brachypodium distachyon]
          Length = 821

 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 141/519 (27%), Positives = 231/519 (44%), Gaps = 50/519 (9%)

Query: 55  NLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLN 114
            +++AR  F  M   +  P    +N L  A A+   +   I+    ++   + P   T N
Sbjct: 170 QIDQARGLFFEMQEWRCKPDADIYNSLIHAHARAGQWRWAINIMDDMLRAAIPPSRTTYN 229

Query: 115 ILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRL 174
            +IN  G            K+A  L K M   GV PD++T+  +++ F      S A+  
Sbjct: 230 NVINACG-------AAGNWKKALELCKKMTRNGVGPDLVTHNIVLSAFKNGSQYSKAIAY 282

Query: 175 HKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGIN--PAVVVCT 232
            + M       G     + F+ +I+I  L K+G   +A EL   M+ +     P VV  T
Sbjct: 283 FEMM------KGANIAPDTFTLNIVIHCLVKDGQYGEAIELLNSMREKRTQCPPDVVTYT 336

Query: 233 TLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQR 292
           +++H +   G  E+   +F  M+  G +PN++++N ++      G   +A G+ +L+ Q 
Sbjct: 337 SIMHSYYVCGKVEDCKAVFDMMVAEGVKPNIVSYNALLGAYASRGMHADALGIFKLLKQN 396

Query: 293 GLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEA 352
           GL PD  +Y +L++ Y   G+ + ARE F  M    C+  +VSYN LI+ Y      +EA
Sbjct: 397 GLRPDVVSYTTLLNAYGRSGQPEKAREAFKEMRKNSCRPNIVSYNALIDAYGSAGMFKEA 456

Query: 353 MSLY-------------------------RQII----------SNGVRQTVITYNTLLSG 377
           +SL                          RQI           S G++  ++ YN+ +  
Sbjct: 457 ISLLHEMEKDGIPPDVVSISTLLTACGRCRQITKIDTILEAAKSRGIKLNIVCYNSGIGS 516

Query: 378 LFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFG 437
               G  G A +L+  M   NV PD  TYNILI GLCK     E++K F  +   +    
Sbjct: 517 YLNFGDYGKALELYAVMMASNVNPDAVTYNILISGLCKVGKYAESLKFFEDMVDLRIPLT 576

Query: 438 IEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLL 497
            E+++ LI    K G+L  A   F  + + G +P V+TY+ MI      G    A D   
Sbjct: 577 KEVYSSLICSYVKQGKLTEAESTFSSMKESGCLPDVLTYTAMIEAYNDDGSWRNAWDLFK 636

Query: 498 YMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAE 536
            ME N   P+ +  ++LM    + ++  +V++L+  M E
Sbjct: 637 EMEGNTVQPDAIICSSLMEALNRGSQHERVLQLMELMKE 675



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 120/533 (22%), Positives = 239/533 (44%), Gaps = 38/533 (7%)

Query: 32  AAVSSPETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHY 91
           AA+    T  N  ++    +G  N  +A      MT     P + + N++  A      Y
Sbjct: 219 AAIPPSRTTYNNVINACGAAG--NWKKALELCKKMTRNGVGPDLVTHNIVLSAFKNGSQY 276

Query: 92  DAVISFYRKLVSIGLLPDFLTLNILINC------FGN---------KERGLC-------- 128
              I+++  +    + PD  TLNI+I+C      +G          ++R  C        
Sbjct: 277 SKAIAYFEMMKGANIAPDTFTLNIVIHCLVKDGQYGEAIELLNSMREKRTQCPPDVVTYT 336

Query: 129 -------VENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSG 181
                  V  ++++   +F  M+A GV+P++++Y  L+  +   G  + AL + K +   
Sbjct: 337 SIMHSYYVCGKVEDCKAVFDMMVAEGVKPNIVSYNALLGAYASRGMHADALGIFKLL--- 393

Query: 182 DYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCA 241
             +NGL  + ++ SY+ ++++  + G  +KA+E F EM+     P +V    LI  +  A
Sbjct: 394 -KQNGL--RPDVVSYTTLLNAYGRSGQPEKAREAFKEMRKNSCRPNIVSYNALIDAYGSA 450

Query: 242 GNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTY 301
           G ++E   L  EM   G  P++++ + ++    +  +I + + +LE    RG+  +   Y
Sbjct: 451 GMFKEAISLLHEMEKDGIPPDVVSISTLLTACGRCRQITKIDTILEAAKSRGIKLNIVCY 510

Query: 302 NSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIIS 361
           NS +  Y   G    A E++  M +       V+YNILI+G CK+    E++  +  ++ 
Sbjct: 511 NSGIGSYLNFGDYGKALELYAVMMASNVNPDAVTYNILISGLCKVGKYAESLKFFEDMVD 570

Query: 362 NGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQE 421
             +  T   Y++L+    + G+   A+  F  MK     PD+ TY  +I+    +   + 
Sbjct: 571 LRIPLTKEVYSSLICSYVKQGKLTEAESTFSSMKESGCLPDVLTYTAMIEAYNDDGSWRN 630

Query: 422 AVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIH 481
           A  LF  +E N  +    I + L++ L +  + +   +L   + +K +      Y  +I 
Sbjct: 631 AWDLFKEMEGNTVQPDAIICSSLMEALNRGSQHERVLQLMELMKEKCIPLNQKAYFEIIA 690

Query: 482 GLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKM 534
                   + A++ + +++ +  + +V T N L+    +  KT  +++L +KM
Sbjct: 691 SCSMLRDWKTASEIIEHLDSSLSSISVGTLNHLLTFLGKCGKTECMMKLFYKM 743



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 102/407 (25%), Positives = 180/407 (44%), Gaps = 43/407 (10%)

Query: 196 YSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFC---------------- 239
           Y ++I    +   +D+A+ LF EM+     P   +  +LIH                   
Sbjct: 158 YGMMIRLHARHSQIDQARGLFFEMQEWRCKPDADIYNSLIHAHARAGQWRWAINIMDDML 217

Query: 240 -------------------CAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKIN 280
                               AGNW++   L  +M   G  P+L+T N+++     G + +
Sbjct: 218 RAAIPPSRTTYNNVINACGAAGNWKKALELCKKMTRNGVGPDLVTHNIVLSAFKNGSQYS 277

Query: 281 EANGLLELMIQRGLNPDRFTYNSLMDGYCLV--GRIDTAREIFLSMHSK--GCKHTVVSY 336
           +A    E+M    + PD FT N ++  +CLV  G+   A E+  SM  K   C   VV+Y
Sbjct: 278 KAIAYFEMMKGANIAPDTFTLNIVI--HCLVKDGQYGEAIELLNSMREKRTQCPPDVVTY 335

Query: 337 NILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKL 396
             +++ Y     VE+  +++  +++ GV+  +++YN LL      G    A  +F  +K 
Sbjct: 336 TSIMHSYYVCGKVEDCKAVFDMMVAEGVKPNIVSYNALLGAYASRGMHADALGIFKLLKQ 395

Query: 397 YNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDN 456
             + PD+ +Y  L++   ++   ++A + F  +  N     I  +N LID    AG    
Sbjct: 396 NGLRPDVVSYTTLLNAYGRSGQPEKAREAFKEMRKNSCRPNIVSYNALIDAYGSAGMFKE 455

Query: 457 AWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMH 516
           A  L H++ + G+ P VV+ S ++    R  ++ K +  L   +  G   N+V +N+ + 
Sbjct: 456 AISLLHEMEKDGIPPDVVSISTLLTACGRCRQITKIDTILEAAKSRGIKLNIVCYNSGIG 515

Query: 517 GFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
            +L      K +EL   M     N+ PD  T++I++  L K  KY E
Sbjct: 516 SYLNFGDYGKALELYAVMMAS--NVNPDAVTYNILISGLCKVGKYAE 560



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 96/388 (24%), Positives = 166/388 (42%), Gaps = 34/388 (8%)

Query: 58  EARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILI 117
           +AR  F  M      P I S+N L  A      +   IS   ++   G+ PD ++++ L+
Sbjct: 420 KAREAFKEMRKNSCRPNIVSYNALIDAYGSAGMFKEAISLLHEMEKDGIPPDVVSISTLL 479

Query: 118 NCFGN--------------KERGL-----CVENRIK---------EATWLFKNMIAFGVR 149
              G               K RG+     C  + I          +A  L+  M+A  V 
Sbjct: 480 TACGRCRQITKIDTILEAAKSRGIKLNIVCYNSGIGSYLNFGDYGKALELYAVMMASNVN 539

Query: 150 PDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLV 209
           PD +TY  LI+G C+ G  + +L+  + MV  D    L  +     YS +I S  K+G +
Sbjct: 540 PDAVTYNILISGLCKVGKYAESLKFFEDMV--DLRIPLTKEV----YSSLICSYVKQGKL 593

Query: 210 DKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVM 269
            +A+  F  MK  G  P V+  T +I  +   G+W     LF EM     +P+ +  + +
Sbjct: 594 TEAESTFSSMKESGCLPDVLTYTAMIEAYNDDGSWRNAWDLFKEMEGNTVQPDAIICSSL 653

Query: 270 IDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGC 329
           ++ L +G +      L+ELM ++ +  ++  Y  ++    ++    TA EI   + S   
Sbjct: 654 MEALNRGSQHERVLQLMELMKEKCIPLNQKAYFEIIASCSMLRDWKTASEIIEHLDSSLS 713

Query: 330 KHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQK 389
             +V + N L+    K    E  M L+ +++S+     V TY  LL  L   G+     +
Sbjct: 714 SISVGTLNHLLTFLGKCGKTECMMKLFYKMMSSCSTVGVSTYTVLLRNLLAVGKWRKYIE 773

Query: 390 LFDEMKLYNVEPDLSTYNILIDGLCKNN 417
           +   M+   V P L  Y  ++  + ++N
Sbjct: 774 VLQWMEDAGVSPTLYMYQNVLPYIWRDN 801



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 46/185 (24%), Positives = 84/185 (45%)

Query: 383 QAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFN 442
           Q   A+ LF EM+ +  +PD   YN LI    +    + A+ +   +           +N
Sbjct: 170 QIDQARGLFFEMQEWRCKPDADIYNSLIHAHARAGQWRWAINIMDDMLRAAIPPSRTTYN 229

Query: 443 CLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKN 502
            +I+    AG    A EL  K+ + G+ P +VT++I++       +  KA  +   M+  
Sbjct: 230 NVINACGAAGNWKKALELCKKMTRNGVGPDLVTHNIVLSAFKNGSQYSKAIAYFEMMKGA 289

Query: 503 GCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYH 562
             AP+  T N ++H  +++ +  + +ELL+ M E      PD  T++ ++       K  
Sbjct: 290 NIAPDTFTLNIVIHCLVKDGQYGEAIELLNSMREKRTQCPPDVVTYTSIMHSYYVCGKVE 349

Query: 563 ECSAV 567
           +C AV
Sbjct: 350 DCKAV 354



 Score = 48.9 bits (115), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 42/194 (21%), Positives = 76/194 (39%), Gaps = 38/194 (19%)

Query: 406 YNILIDGLCKNNCVQEAVKLFHMLE-MNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKL 464
           + +LI  +     +Q AV +F  ++    +    +I+  +I    +  ++D A  LF ++
Sbjct: 122 FPLLIREITFAGSLQHAVHVFRWMKNQENYCARNDIYGMMIRLHARHSQIDQARGLFFEM 181

Query: 465 PQKGLVPTVVTYSIMIHGLCRKGK-----------------------------------L 489
            +    P    Y+ +IH   R G+                                    
Sbjct: 182 QEWRCKPDADIYNSLIHAHARAGQWRWAINIMDDMLRAAIPPSRTTYNNVINACGAAGNW 241

Query: 490 EKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFS 549
           +KA +    M +NG  P++VT N ++  F   ++ SK +     M     N+ PD  T +
Sbjct: 242 KKALELCKKMTRNGVGPDLVTHNIVLSAFKNGSQYSKAIAYFEMMKGA--NIAPDTFTLN 299

Query: 550 IVVDLLAKDEKYHE 563
           IV+  L KD +Y E
Sbjct: 300 IVIHCLVKDGQYGE 313


>gi|356564530|ref|XP_003550506.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g11690-like [Glycine max]
          Length = 556

 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 119/372 (31%), Positives = 194/372 (52%), Gaps = 2/372 (0%)

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
           N +S+ I+I   C+ G   +   L   ++  G++P VV+ TTLI G C  G+      LF
Sbjct: 157 NAYSFGIMITGCCEAGYFVRVFRLLAVLEEFGLSPNVVIYTTLIDGCCKNGDVMLAKNLF 216

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
            +M  LG  PN  T++V+++   K G   E   + E M + G+ P+ + YN L+  YC  
Sbjct: 217 CKMDRLGLVPNQHTYSVLMNGFFKQGLQREGFQMYENMNRSGIVPNAYAYNCLISEYCND 276

Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
           G +D A ++F  M  KG    V++YNILI G C+     EA+ L  ++   G+   ++TY
Sbjct: 277 GMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTY 336

Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
           N L++G    G+   A +LF+++K   + P L TYN LI G  K   +  A+ L   +E 
Sbjct: 337 NILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEE 396

Query: 432 NKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEK 491
                    +  LID   +    D A E+   + + GLVP V TYS++IHG C  G +++
Sbjct: 397 RCIARSKVTYTILIDAFARLNYTDKACEMHSLMEKSGLVPDVYTYSVLIHGXCVNGNMKE 456

Query: 492 ANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIV 551
           A+     + +    PN V +NT++HG+ +   + + + LL++M      +VP+  +F   
Sbjct: 457 ASKPFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVHS--GMVPNVASFCST 514

Query: 552 VDLLAKDEKYHE 563
           + LL +DEK+ E
Sbjct: 515 MGLLCRDEKWKE 526



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 135/471 (28%), Positives = 235/471 (49%), Gaps = 20/471 (4%)

Query: 41  LNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRK 100
           +N ++H +      + ++A  F  +M H   +P  ++FN L   + ++ ++D     +  
Sbjct: 96  VNAYVHSH------STDQALTFLHHMIHEGHAPLSNTFNNLLCLLIRSNYFDKAWWIFNV 149

Query: 101 LVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLIN 160
           L S  +L  +         FG    G C          L   +  FG+ P+V+ Y TLI+
Sbjct: 150 LKSKVVLNAY--------SFGIMITGCCEAGYFVRVFRLLAVLEEFGLSPNVVIYTTLID 201

Query: 161 GFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMK 220
           G C+ G++ +A  L  KM       GL+   N  +YS++++   K+GL  +  +++  M 
Sbjct: 202 GCCKNGDVMLAKNLFCKMD----RLGLVP--NQHTYSVLMNGFFKQGLQREGFQMYENMN 255

Query: 221 GRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKIN 280
             GI P       LI  +C  G  ++   +F EM + G    ++T+N++I  LC+G K  
Sbjct: 256 RSGIVPNAYAYNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFG 315

Query: 281 EANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILI 340
           EA  L+  + + GL+P+  TYN L++G+C VG++DTA  +F  + S G   T+V+YN LI
Sbjct: 316 EAVKLVHKVNKVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLI 375

Query: 341 NGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVE 400
            GY K+ N+  A+ L +++    + ++ +TY  L+    +      A ++   M+   + 
Sbjct: 376 AGYSKVENLAGALDLVKEMEERCIARSKVTYTILIDAFARLNYTDKACEMHSLMEKSGLV 435

Query: 401 PDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWEL 460
           PD+ TY++LI G C N  ++EA K F  L     +    I+N +I G CK G    A  L
Sbjct: 436 PDVYTYSVLIHGXCVNGNMKEASKPFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRL 495

Query: 461 FHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTF 511
            +++   G+VP V ++   +  LCR  K ++A   L  M  +G  P+V  +
Sbjct: 496 LNEMVHSGMVPNVASFCSTMGLLCRDEKWKEAELLLGQMINSGLKPSVSLY 546



 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 132/454 (29%), Positives = 215/454 (47%), Gaps = 15/454 (3%)

Query: 78  FNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEAT 137
           ++ +  A   +   D  ++F   ++  G  P       L N F N    L   N   +A 
Sbjct: 92  YDAIVNAYVHSHSTDQALTFLHHMIHEGHAP-------LSNTFNNLLCLLIRSNYFDKAW 144

Query: 138 WLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYS 197
           W+F N++   V  +  ++G +I G C  G      RL    ++   E GL    N+  Y+
Sbjct: 145 WIF-NVLKSKVVLNAYSFGIMITGCCEAGYFVRVFRL----LAVLEEFGL--SPNVVIYT 197

Query: 198 IIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDL 257
            +ID  CK G V  AK LF +M   G+ P     + L++GF   G   E   ++  M   
Sbjct: 198 TLIDGCCKNGDVMLAKNLFCKMDRLGLVPNQHTYSVLMNGFFKQGLQREGFQMYENMNRS 257

Query: 258 GPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTA 317
           G  PN   +N +I   C  G +++A  +   M ++G+     TYN L+ G C   +   A
Sbjct: 258 GIVPNAYAYNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEA 317

Query: 318 REIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSG 377
            ++   ++  G    +V+YNILING+C +  ++ A+ L+ Q+ S+G+  T++TYNTL++G
Sbjct: 318 VKLVHKVNKVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAG 377

Query: 378 LFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFG 437
             +      A  L  EM+   +     TY ILID   + N   +A ++  ++E +     
Sbjct: 378 YSKVENLAGALDLVKEMEERCIARSKVTYTILIDAFARLNYTDKACEMHSLMEKSGLVPD 437

Query: 438 IEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLL 497
           +  ++ LI G C  G +  A + F  L +  L P  V Y+ MIHG C++G   +A   L 
Sbjct: 438 VYTYSVLIHGXCVNGNMKEASKPFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLN 497

Query: 498 YMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELL 531
            M  +G  PNV +F + M G L  ++  K  ELL
Sbjct: 498 EMVHSGMVPNVASFCSTM-GLLCRDEKWKEAELL 530



 Score = 59.3 bits (142), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 55/234 (23%), Positives = 99/234 (42%), Gaps = 22/234 (9%)

Query: 320 IFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLF 379
           +F +   +G  HT  S + ++N       + +A SL  ++IS  +  ++         + 
Sbjct: 25  LFNTASYQGLHHTSHSISFILNHLLSSGMLPQAQSLILRLISGRIPSSL---------ML 75

Query: 380 QAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIE 439
           Q  QA      F     Y        Y+ +++    ++   +A+   H +          
Sbjct: 76  QLTQAH-----FTSCSTYT-----PLYDAIVNAYVHSHSTDQALTFLHHMIHEGHAPLSN 125

Query: 440 IFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYM 499
            FN L+  L ++   D AW +F+ L  K +V    ++ IMI G C  G   +    L  +
Sbjct: 126 TFNNLLCLLIRSNYFDKAWWIFNVLKSK-VVLNAYSFGIMITGCCEAGYFVRVFRLLAVL 184

Query: 500 EKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
           E+ G +PNVV + TL+ G  +N        L  KM      LVP+  T+S++++
Sbjct: 185 EEFGLSPNVVIYTTLIDGCCKNGDVMLAKNLFCKM--DRLGLVPNQHTYSVLMN 236


>gi|302758228|ref|XP_002962537.1| hypothetical protein SELMODRAFT_70281 [Selaginella moellendorffii]
 gi|300169398|gb|EFJ36000.1| hypothetical protein SELMODRAFT_70281 [Selaginella moellendorffii]
          Length = 439

 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 115/389 (29%), Positives = 199/389 (51%), Gaps = 15/389 (3%)

Query: 150 PDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLV 209
           P+  T+  LI G C+ G L  A+  + +M+    E   +   N+   ++++ SLC+ G +
Sbjct: 1   PNRFTFSVLIAGLCKAGRLGEAVECYNQML----ERHCVP--NLRDINLLLASLCQAGKM 54

Query: 210 DKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEM-LDLGPRPNLLTFNV 268
           D+A  +F   +G   +P+V+    LI+GFC     ++   LF EM  +    P   T+  
Sbjct: 55  DQAMAIF---RGIQCSPSVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTA 111

Query: 269 MIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSM-HSK 327
           +I C CK  ++++A  LLE       + D     S+  G+C   R+D A ++ L M   K
Sbjct: 112 IIKCYCKMDRLDQARQLLEE--SSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKK 169

Query: 328 GCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYA 387
             K  +V++N++I+G+CK   V EA  +   ++S G     +TY TL+ G  ++G    A
Sbjct: 170 SAKPDIVAWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEA 229

Query: 388 QKLFDEM--KLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLI 445
            +LF  +  + ++ EP++ T+N LI GLCK + ++ A +L   ++          +  L+
Sbjct: 230 LQLFKVLSSRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLM 289

Query: 446 DGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCA 505
           DGLCK GR      +F ++ ++G  P+VVTY+ ++H  C+ G L+ A   +  M   G  
Sbjct: 290 DGLCKQGRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIP 349

Query: 506 PNVVTFNTLMHGFLQNNKTSKVVELLHKM 534
           P+V T+  L+ G  +N K     E   K+
Sbjct: 350 PDVTTYTVLLEGLFENGKVRTATEFFEKI 378



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 122/455 (26%), Positives = 219/455 (48%), Gaps = 20/455 (4%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
           P   +F++L   + K       +  Y +++    +P+   +N+L+         LC   +
Sbjct: 1   PNRFTFSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLA-------SLCQAGK 53

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
           + +A  +F+ +      P VIT   LINGFC    L  AL L  +M     E        
Sbjct: 54  MDQAMAIFRGI---QCSPSVITLNILINGFCELQLLDKALELFHEM-----EKNFALVPE 105

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
             +Y+ II   CK   +D+A++L  E      +  V+  T++  GFC A   +E   L +
Sbjct: 106 ATTYTAIIKCYCKMDRLDQARQLLEE--SSCCSSDVIAITSVARGFCKAQRVDEAYQLLL 163

Query: 253 EMLDL-GPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
           +M++    +P+++ +NV+I   CK G++ EA  +LE ++  G  P+  TY +L+DG+C  
Sbjct: 164 DMVEKKSAKPDIVAWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKS 223

Query: 312 GRIDTAREIF--LSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVI 369
           G +  A ++F  LS      +  VV++N LI+G CK   +E A  L +Q+ +  +R    
Sbjct: 224 GNLSEALQLFKVLSSRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTF 283

Query: 370 TYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHML 429
           TY TL+ GL + G+     ++F+EM      P + TY  L+   CK   +Q+A ++   +
Sbjct: 284 TYTTLMDGLCKQGRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSM 343

Query: 430 EMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKL 489
                   +  +  L++GL + G++  A E F K+ ++   P  V YS ++ G C+   +
Sbjct: 344 VAKGIPPDVTTYTVLLEGLFENGKVRTATEFFEKILRERCPPCAVVYSALVRGCCKAALV 403

Query: 490 EKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKT 524
           ++A  + + M     AP+  T   L+    +  +T
Sbjct: 404 DEAVKYYVEMLDRRLAPDPATCKLLVEMLCKRGRT 438



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 120/446 (26%), Positives = 215/446 (48%), Gaps = 24/446 (5%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CK+G   L EA   +  M      P +   NLL  ++ +    D  ++ +R    I   P
Sbjct: 14  CKAG--RLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGKMDQAMAIFR---GIQCSP 68

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIA-FGVRPDVITYGTLINGFCRTGN 167
             +TLNILIN       G C    + +A  LF  M   F + P+  TY  +I  +C+   
Sbjct: 69  SVITLNILIN-------GFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKCYCKMDR 121

Query: 168 LSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEM-KGRGINP 226
           L  A +L         E      +++ + + +    CK   VD+A +L L+M + +   P
Sbjct: 122 LDQARQL--------LEESSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKP 173

Query: 227 AVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLL 286
            +V    +IHGFC AG   E   +   ++ +G  PN +T+  +ID  CK G ++EA  L 
Sbjct: 174 DIVAWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLF 233

Query: 287 ELMIQRG--LNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYC 344
           +++  R     P+  T+N+L+ G C   R++ A E+   M ++  +    +Y  L++G C
Sbjct: 234 KVLSSRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLC 293

Query: 345 KILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLS 404
           K     E   ++ +++  G   +V+TY TL+    +AG    AQ++   M    + PD++
Sbjct: 294 KQGRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVT 353

Query: 405 TYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKL 464
           TY +L++GL +N  V+ A + F  +   +      +++ L+ G CKA  +D A + + ++
Sbjct: 354 TYTVLLEGLFENGKVRTATEFFEKILRERCPPCAVVYSALVRGCCKAALVDEAVKYYVEM 413

Query: 465 PQKGLVPTVVTYSIMIHGLCRKGKLE 490
             + L P   T  +++  LC++G+ +
Sbjct: 414 LDRRLAPDPATCKLLVEMLCKRGRTD 439



 Score =  132 bits (331), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 76/267 (28%), Positives = 144/267 (53%), Gaps = 7/267 (2%)

Query: 296 PDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSL 355
           P+RFT++ L+ G C  GR+  A E +  M  + C   +   N+L+   C+   +++AM++
Sbjct: 1   PNRFTFSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGKMDQAMAI 60

Query: 356 YRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEM-KLYNVEPDLSTYNILIDGLC 414
           +R I  +    +VIT N L++G  +      A +LF EM K + + P+ +TY  +I   C
Sbjct: 61  FRGIQCS---PSVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKCYC 117

Query: 415 KNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELF-HKLPQKGLVPTV 473
           K + + +A +L    E +     +     +  G CKA R+D A++L    + +K   P +
Sbjct: 118 KMDRLDQARQLLE--ESSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPDI 175

Query: 474 VTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHK 533
           V ++++IHG C+ G++ +A + L  +   GC PN VT+ TL+ GF ++   S+ ++L   
Sbjct: 176 VAWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKV 235

Query: 534 MAEPERNLVPDDTTFSIVVDLLAKDEK 560
           ++  + +  P+  TF+ ++  L K ++
Sbjct: 236 LSSRDHHAEPNVVTFNALISGLCKADR 262


>gi|115444031|ref|NP_001045795.1| Os02g0132100 [Oryza sativa Japonica Group]
 gi|41052573|dbj|BAD07755.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113535326|dbj|BAF07709.1| Os02g0132100 [Oryza sativa Japonica Group]
 gi|125537962|gb|EAY84357.1| hypothetical protein OsI_05732 [Oryza sativa Indica Group]
 gi|125580699|gb|EAZ21630.1| hypothetical protein OsJ_05259 [Oryza sativa Japonica Group]
          Length = 871

 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 133/502 (26%), Positives = 231/502 (46%), Gaps = 50/502 (9%)

Query: 78  FNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEAT 137
           +N L  A  +   +D V S Y+ L+  G  PD  T NIL+       + LC   R++ A 
Sbjct: 118 YNRLLLAALQEARFDLVESLYKDLLLSGAAPDVFTRNILL-------QALCAAGRMELAR 170

Query: 138 WLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYS 197
            +F  M       +  ++G L  G+CR G    AL +   M +           N+   +
Sbjct: 171 RVFDAM----PERNEFSFGILARGYCRAGRSMDALGVLDSMPT----------MNLVVCN 216

Query: 198 IIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDL 257
            ++   C+EG VD+A+ L   M+  G+ P VV     I   C AG   +   +F +M + 
Sbjct: 217 TVVAGFCREGQVDEAERLVERMRDEGLAPNVVTFNARISALCKAGRVLDAYRIFNDMQEK 276

Query: 258 G----PRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGR 313
                PRP+ +TF+VM+   C+ G ++EA  L+++M   G      +YN  + G    G 
Sbjct: 277 WERGLPRPDQVTFDVMLSGFCEAGMVDEARVLVDIMRCGGFLRRVESYNRWLSGLVRNGM 336

Query: 314 IDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNT 373
           +  A+E+   M  +G +    +YNI+++G CK     +   +   + S  +   V+TY +
Sbjct: 337 VGEAQELLREMAHEGVQPNSYTYNIIVDGLCKEGKAFDVRKVEDFVKSGVMTPDVVTYTS 396

Query: 374 LLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNK 433
           LL      G A  A ++ DEM      P+  TYN+L+  L K   + EA +L   +    
Sbjct: 397 LLHAYCSEGNAAAANRILDEMAQKGCAPNSFTYNVLLQSLWKAGRITEAERLLERMSEKG 456

Query: 434 FEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKG-----------------------LV 470
           +       N +IDGLC+  +LD A ++   +  +G                        +
Sbjct: 457 YSLDTASCNIIIDGLCRNNKLDMAMDIVDGMWNEGSLALGRLGYSFLSLLTDSSSSKRCL 516

Query: 471 PTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVEL 530
           P  +TYS ++  LC++G+ ++A   LL M     +P+ V ++T +HG+ ++ KTS  V++
Sbjct: 517 PDRITYSTLVSALCKEGRFDEAKKKLLEMIGKDISPDSVLYDTFIHGYCKHGKTSLAVKV 576

Query: 531 LHKMAEPERNLVPDDTTFSIVV 552
           L  M   ++   P   T+++++
Sbjct: 577 LRDM--EKKGCKPSTRTYNLLI 596



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 125/517 (24%), Positives = 234/517 (45%), Gaps = 42/517 (8%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           C++G+++  EAR     M        + S+N     + +N          R++   G+ P
Sbjct: 297 CEAGMVD--EARVLVDIMRCGGFLRRVESYNRWLSGLVRNGMVGEAQELLREMAHEGVQP 354

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGV-RPDVITYGTLINGFCRTGN 167
           +  T NI+++       GLC E +  +   + ++ +  GV  PDV+TY +L++ +C  GN
Sbjct: 355 NSYTYNIIVD-------GLCKEGKAFDVRKV-EDFVKSGVMTPDVVTYTSLLHAYCSEGN 406

Query: 168 LSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPA 227
            + A R+  +M             N F+Y++++ SL K G + +A+ L   M  +G +  
Sbjct: 407 AAAANRILDEMAQKG------CAPNSFTYNVLLQSLWKAGRITEAERLLERMSEKGYSLD 460

Query: 228 VVVCTTLIHGFCCAGNWEE----VNGLFIE-MLDLGPR------------------PNLL 264
              C  +I G C     +     V+G++ E  L LG                    P+ +
Sbjct: 461 TASCNIIIDGLCRNNKLDMAMDIVDGMWNEGSLALGRLGYSFLSLLTDSSSSKRCLPDRI 520

Query: 265 TFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSM 324
           T++ ++  LCK G+ +EA   L  MI + ++PD   Y++ + GYC  G+   A ++   M
Sbjct: 521 TYSTLVSALCKEGRFDEAKKKLLEMIGKDISPDSVLYDTFIHGYCKHGKTSLAVKVLRDM 580

Query: 325 HSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQA 384
             KGCK +  +YN+LI G+ +  N +E + L  ++   G+   V+TYN+L+    + G  
Sbjct: 581 EKKGCKPSTRTYNLLIWGFREKHNSDEILKLISEMKGKGICPNVMTYNSLIKSFCERGMV 640

Query: 385 GYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCL 444
             A  L DEM    + P+++++ +LI   CK +    A ++F    ++       +++ +
Sbjct: 641 NKAMPLLDEMLQNEIVPNITSFELLIKAFCKTSDFSAAQRVFDA-SLSTCGQKEVLYSLM 699

Query: 445 IDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGC 504
              L   GR   A  +   + +  +      Y  +I GLC+  +++  +  L  +   G 
Sbjct: 700 CTQLSTYGRWLEAMNILETVLELRISIHRFPYKQIIEGLCKVDEVDHGHRLLKLLMVKGY 759

Query: 505 APNVVTFNTLMHGFLQNNKTSKVVELLHKMAE-PERN 540
           + +   F  ++    +  K   V  L  KM E  ER+
Sbjct: 760 SFDPAAFMPVIDALSERGKKQHVDMLSQKMMEMAERD 796



 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 109/413 (26%), Positives = 197/413 (47%), Gaps = 35/413 (8%)

Query: 178 MVSGDYENGLISKT--NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLI 235
           +V   Y++ L+S    ++F+ +I++ +LC  G ++ A+ +F  M  R           L 
Sbjct: 133 LVESLYKDLLLSGAAPDVFTRNILLQALCAAGRMELARRVFDAMPERN----EFSFGILA 188

Query: 236 HGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLN 295
            G+C AG   +  G+    LD  P  NL+  N ++   C+ G+++EA  L+E M   GL 
Sbjct: 189 RGYCRAGRSMDALGV----LDSMPTMNLVVCNTVVAGFCREGQVDEAERLVERMRDEGLA 244

Query: 296 PDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKG----CKHTVVSYNILINGYCKILNVEE 351
           P+  T+N+ +   C  GR+  A  IF  M  K      +   V+++++++G+C+   V+E
Sbjct: 245 PNVVTFNARISALCKAGRVLDAYRIFNDMQEKWERGLPRPDQVTFDVMLSGFCEAGMVDE 304

Query: 352 AMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILID 411
           A  L   +   G  + V +YN  LSGL + G  G AQ+L  EM    V+P+  TYNI++D
Sbjct: 305 ARVLVDIMRCGGFLRRVESYNRWLSGLVRNGMVGEAQELLREMAHEGVQPNSYTYNIIVD 364

Query: 412 GLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVP 471
           GLCK     +  K+   ++       +  +  L+   C  G    A  +  ++ QKG  P
Sbjct: 365 GLCKEGKAFDVRKVEDFVKSGVMTPDVVTYTSLLHAYCSEGNAAAANRILDEMAQKGCAP 424

Query: 472 TVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELL 531
              TY++++  L + G++ +A   L  M + G + +  + N ++ G  +NNK    ++++
Sbjct: 425 NSFTYNVLLQSLWKAGRITEAERLLERMSEKGYSLDTASCNIIIDGLCRNNKLDMAMDIV 484

Query: 532 HKM---------------------AEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
             M                     +   +  +PD  T+S +V  L K+ ++ E
Sbjct: 485 DGMWNEGSLALGRLGYSFLSLLTDSSSSKRCLPDRITYSTLVSALCKEGRFDE 537



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 83/333 (24%), Positives = 160/333 (48%), Gaps = 41/333 (12%)

Query: 266 FNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMH 325
           +N ++    +  + +    L + ++  G  PD FT N L+   C  GR++ AR +F +M 
Sbjct: 118 YNRLLLAALQEARFDLVESLYKDLLLSGAAPDVFTRNILLQALCAAGRMELARRVFDAMP 177

Query: 326 SKG-----------CKH----------------TVVSYNILINGYCKILNVEEAMSLYRQ 358
            +            C+                  +V  N ++ G+C+   V+EA  L  +
Sbjct: 178 ERNEFSFGILARGYCRAGRSMDALGVLDSMPTMNLVVCNTVVAGFCREGQVDEAERLVER 237

Query: 359 IISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYN----VEPDLSTYNILIDGLC 414
           +   G+   V+T+N  +S L +AG+   A ++F++M+         PD  T+++++ G C
Sbjct: 238 MRDEGLAPNVVTFNARISALCKAGRVLDAYRIFNDMQEKWERGLPRPDQVTFDVMLSGFC 297

Query: 415 KNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVV 474
           +   V EA  L  ++    F   +E +N  + GL + G +  A EL  ++  +G+ P   
Sbjct: 298 EAGMVDEARVLVDIMRCGGFLRRVESYNRWLSGLVRNGMVGEAQELLREMAHEGVQPNSY 357

Query: 475 TYSIMIHGLCRKGK---LEKANDFLLYMEKNGC-APNVVTFNTLMHGFLQNNKTSKVVEL 530
           TY+I++ GLC++GK   + K  DF+    K+G   P+VVT+ +L+H +      +    +
Sbjct: 358 TYNIIVDGLCKEGKAFDVRKVEDFV----KSGVMTPDVVTYTSLLHAYCSEGNAAAANRI 413

Query: 531 LHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
           L +MA  ++   P+  T+++++  L K  +  E
Sbjct: 414 LDEMA--QKGCAPNSFTYNVLLQSLWKAGRITE 444


>gi|297738031|emb|CBI27232.3| unnamed protein product [Vitis vinifera]
          Length = 660

 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 131/429 (30%), Positives = 216/429 (50%), Gaps = 13/429 (3%)

Query: 134 KEATWLFKNMI-AFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
           ++A  LF  M+  F  R  V ++ +++N   + G    AL          YE G+  KTN
Sbjct: 132 EKAIELFGRMVDEFQCRRTVRSFNSVLNVIIQEGLFHRALEF--------YECGVGGKTN 183

Query: 193 I----FSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVN 248
           I     S++++I ++CK GLVD+A E+F EM  +   P V    TL+ G C     +E  
Sbjct: 184 ISPNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAV 243

Query: 249 GLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGY 308
            L  EM   G  P+ +TFNV+I+ LCK G +     L++ M  +G  P+  TYN++++G 
Sbjct: 244 LLLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGL 303

Query: 309 CLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTV 368
           CL G++D A  +   M +  C    V+Y  LING  K     + + L   +   G     
Sbjct: 304 CLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANE 363

Query: 369 ITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHM 428
             Y+TL+SGLF+  ++  A  L+ +M     +P++  Y+ LIDGLC+   + EA ++   
Sbjct: 364 YAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCE 423

Query: 429 LEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGK 488
           +           ++ LI G  K G    A  ++ ++ +   VP  + YS++IHGLC  GK
Sbjct: 424 MVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGK 483

Query: 489 LEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTF 548
           L +A     +M   G  P+VV +++++HG          ++L ++M   E +  PD  T+
Sbjct: 484 LREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTY 543

Query: 549 SIVVDLLAK 557
           +I++  L K
Sbjct: 544 NILLRALCK 552



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 148/548 (27%), Positives = 258/548 (47%), Gaps = 23/548 (4%)

Query: 15  TVSKVKLSS---LFKSPRQIAAVSSPETQLNEFLHENCKSGIINLNEARYFFGYMTHMQP 71
           +VS+  L S   +FKS  Q+ +  S ++     +     SG  +       F  M   + 
Sbjct: 54  SVSRSFLQSETYIFKSASQMGSYKSGDSTFYSLIENYANSG--DFGTLFQVFDRMKRERR 111

Query: 72  SPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVEN 131
                +F L+F A  K    +  I  + ++V      D       +  F +    +  E 
Sbjct: 112 VFIEKNFILVFRAYGKAHLPEKAIELFGRMV------DEFQCRRTVRSFNSVLNVIIQEG 165

Query: 132 RIKEATWLFKNMIA--FGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLIS 189
               A   ++  +     + P+V+++  +I   C+ G +  A+ + ++M     E     
Sbjct: 166 LFHRALEFYECGVGGKTNISPNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKCE----- 220

Query: 190 KTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNG 249
             ++F+Y  ++D LCKE  +D+A  L  EM+  G  P+ V    LI+G C  G+   V  
Sbjct: 221 -PDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTK 279

Query: 250 LFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYC 309
           L   M   G  PN +T+N +I+ LC  GK+++A  LL+ M+     P+  TY +L++G  
Sbjct: 280 LVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLV 339

Query: 310 LVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVI 369
             GR      +  S+  +G      +Y+ LI+G  K    EEAM L+++++  G +  ++
Sbjct: 340 KQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIV 399

Query: 370 TYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHML 429
            Y+ L+ GL + G+   A+++  EM      P+  TY+ LI G  K    Q+A++++  +
Sbjct: 400 VYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEM 459

Query: 430 EMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKL 489
             N        ++ LI GLC+ G+L  A  ++  +  +GL P VV YS MIHGLC  G +
Sbjct: 460 AKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSV 519

Query: 490 EKANDFLLYM--EKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTT 547
           E        M  +++   P+VVT+N L+    + N  S  ++LL+ M   +R   PD  T
Sbjct: 520 EVGLKLFNEMLCQESDSQPDVVTYNILLRALCKQNSISHAIDLLNSML--DRGCNPDLIT 577

Query: 548 FSIVVDLL 555
            +I ++ L
Sbjct: 578 CNIFLNAL 585



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 133/441 (30%), Positives = 217/441 (49%), Gaps = 24/441 (5%)

Query: 133 IKEATWLFKNMIAFG-VRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKT 191
           ++  T++FK+    G  +    T+ +LI  +  +G+     ++  +M     E  +  + 
Sbjct: 60  LQSETYIFKSASQMGSYKSGDSTFYSLIENYANSGDFGTLFQVFDRM---KRERRVFIEK 116

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
           N   + ++  +  K  L +KA ELF    GR ++     C   +  F    N     GLF
Sbjct: 117 N---FILVFRAYGKAHLPEKAIELF----GRMVDE--FQCRRTVRSFNSVLNVIIQEGLF 167

Query: 252 IEMLD-----LGPR----PNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYN 302
              L+     +G +    PN+L+FN++I  +CK G ++ A  +   M  +   PD FTY 
Sbjct: 168 HRALEFYECGVGGKTNISPNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYC 227

Query: 303 SLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISN 362
           +LMDG C   RID A  +   M  +GC  + V++N+LING CK  ++     L   +   
Sbjct: 228 TLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLK 287

Query: 363 GVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEA 422
           G     +TYNT+++GL   G+   A  L D M      P+  TY  LI+GL K     + 
Sbjct: 288 GCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDG 347

Query: 423 VKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHG 482
           V L   LE          ++ LI GL K  + + A  L+ K+ +KG  P +V YS +I G
Sbjct: 348 VHLLSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDG 407

Query: 483 LCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLV 542
           LCR+GKL++A + L  M   GC PN  T+++L+ GF +   + K + +  +MA  + N V
Sbjct: 408 LCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMA--KNNCV 465

Query: 543 PDDTTFSIVVDLLAKDEKYHE 563
           P++  +S+++  L +D K  E
Sbjct: 466 PNEICYSVLIHGLCEDGKLRE 486



 Score =  122 bits (306), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 107/417 (25%), Positives = 172/417 (41%), Gaps = 87/417 (20%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
           P   +FN+L   + K      V      +   G +P+ +T N +IN       GLC++ +
Sbjct: 256 PSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIIN-------GLCLKGK 308

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRL---------------HKK 177
           + +A  L   M+A    P+ +TYGTLING  + G     + L               +  
Sbjct: 309 LDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYST 368

Query: 178 MVSGDYEN-------GLISK-------TNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRG 223
           ++SG ++        GL  K        NI  YS +ID LC+EG +D+AKE+  EM  +G
Sbjct: 369 LISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKG 428

Query: 224 INPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEAN 283
             P     ++LI GF   GN ++   ++ EM      PN + ++V+I  LC+ GK+ EA 
Sbjct: 429 CTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAM 488

Query: 284 GLLELMIQRGL-------------------------------------NPDRFTYNSLMD 306
            +   M+ RGL                                      PD  TYN L+ 
Sbjct: 489 MMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILLR 548

Query: 307 GYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQ 366
             C    I  A ++  SM  +GC   +++ NI +N   + LN  +    +          
Sbjct: 549 ALCKQNSISHAIDLLNSMLDRGCNPDLITCNIFLNALREKLNPPQDGREF---------- 598

Query: 367 TVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAV 423
                + L+  L +  +   A K+ + M    + P+ ST+  +I  LCK   VQ  +
Sbjct: 599 ----LDELVVRLHKRQRIVGAAKIIEVMLQKFLPPNASTWERIIPELCKPKKVQAII 651


>gi|449453449|ref|XP_004144470.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g13630-like [Cucumis sativus]
          Length = 830

 Score =  202 bits (514), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 140/517 (27%), Positives = 245/517 (47%), Gaps = 17/517 (3%)

Query: 41  LNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRK 100
           +N  + + CK G+I++  AR FF  M          S+N+L   +      D  + F   
Sbjct: 274 INTIMSKFCKVGLIDV--ARSFFCLMVKNGLLHDSFSYNILLHGLCVAGSMDEALGFTDD 331

Query: 101 LVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLIN 160
           +   G+ PD +T N L        +G  +   +  A  + + M+  G+ PD++TY TLI 
Sbjct: 332 MEKHGVEPDVVTYNTL-------AKGFLLLGLMSGARKVVQKMLLQGLNPDLVTYTTLIC 384

Query: 161 GFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMK 220
           G C+ GN+  AL+L ++ +S  +      K N+  Y++++  LCK G +++A  LF EM+
Sbjct: 385 GHCQMGNIEEALKLRQETLSRGF------KLNVIFYNMLLSCLCKVGRIEEALTLFDEME 438

Query: 221 GRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKIN 280
              + P  +V + LIHG C  G  +    L+ +M      P+      ++  L K G I+
Sbjct: 439 TLRLEPDFIVYSILIHGLCKEGFVQRAYQLYEQMRLKRKFPHHFAQRAVLLGLFKNGNIS 498

Query: 281 EANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILI 340
           EA    +   +  L  D   YN ++DGY  +  I  A +++  M  +G   +VV++N LI
Sbjct: 499 EARNYFDTWTRMDLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIERGITPSVVTFNTLI 558

Query: 341 NGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVE 400
           NG+C+  ++ EA  +   I   G+  +V+TY TL++   + G          EM+   V 
Sbjct: 559 NGFCRRGDLMEARKMLEVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANAVV 618

Query: 401 PDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWEL 460
           P   TY +LI GLC+ N + E+++L   +           +N +I   CK   +  A +L
Sbjct: 619 PTHVTYTVLIKGLCRQNKMHESLQLLEYMYAKGLLPDSVTYNTIIQCFCKGKEITKALQL 678

Query: 461 FHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQ 520
           ++ +      PT VTY ++I+ LC  G L+  +  ++ +E        VT+ T++     
Sbjct: 679 YNMMLLHNCDPTQVTYKVLINALCIFGDLKDVDRMVVSIEDRNITLKKVTYMTIIKAHCA 738

Query: 521 NNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAK 557
             + SK +   ++M    +  V     +S V++ L K
Sbjct: 739 KGQVSKALGYFNQML--AKGFVISIRDYSAVINRLCK 773



 Score =  201 bits (512), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 123/433 (28%), Positives = 220/433 (50%), Gaps = 10/433 (2%)

Query: 132 RIKEATWLFKNMIAFGVRPDV-ITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISK 190
           R  +  W   N I     P    T   LI+G C    L  A       +S  +++  +  
Sbjct: 216 RHTDIMWDVYNEIKVSGAPQSECTTSILIHGLCEQSKLEDA-------ISFLHDSNKVVG 268

Query: 191 TNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGL 250
            +I S + I+   CK GL+D A+  F  M   G+         L+HG C AG+ +E  G 
Sbjct: 269 PSIVSINTIMSKFCKVGLIDVARSFFCLMVKNGLLHDSFSYNILLHGLCVAGSMDEALGF 328

Query: 251 FIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCL 310
             +M   G  P+++T+N +       G ++ A  +++ M+ +GLNPD  TY +L+ G+C 
Sbjct: 329 TDDMEKHGVEPDVVTYNTLAKGFLLLGLMSGARKVVQKMLLQGLNPDLVTYTTLICGHCQ 388

Query: 311 VGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVIT 370
           +G I+ A ++     S+G K  V+ YN+L++  CK+  +EEA++L+ ++ +  +    I 
Sbjct: 389 MGNIEEALKLRQETLSRGFKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLRLEPDFIV 448

Query: 371 YNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLE 430
           Y+ L+ GL + G    A +L+++M+L    P       ++ GL KN  + EA   F    
Sbjct: 449 YSILIHGLCKEGFVQRAYQLYEQMRLKRKFPHHFAQRAVLLGLFKNGNISEARNYFDTWT 508

Query: 431 MNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLE 490
                  + ++N +IDG  +   +  A +L++K+ ++G+ P+VVT++ +I+G CR+G L 
Sbjct: 509 RMDLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIERGITPSVVTFNTLINGFCRRGDLM 568

Query: 491 KANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSI 550
           +A   L  +   G  P+VVT+ TLM+ + +     ++   LH+M      +VP   T+++
Sbjct: 569 EARKMLEVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEM--EANAVVPTHVTYTV 626

Query: 551 VVDLLAKDEKYHE 563
           ++  L +  K HE
Sbjct: 627 LIKGLCRQNKMHE 639



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 135/484 (27%), Positives = 224/484 (46%), Gaps = 52/484 (10%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
           P I S N +     K    D   SF+  +V  GLL D  + NIL++       GLCV   
Sbjct: 269 PSIVSINTIMSKFCKVGLIDVARSFFCLMVKNGLLHDSFSYNILLH-------GLCVAGS 321

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
           + EA     +M   GV PDV+TY TL  GF   G                          
Sbjct: 322 MDEALGFTDDMEKHGVEPDVVTYNTLAKGFLLLG-------------------------- 355

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
                          L+  A+++  +M  +G+NP +V  TTLI G C  GN EE   L  
Sbjct: 356 ---------------LMSGARKVVQKMLLQGLNPDLVTYTTLICGHCQMGNIEEALKLRQ 400

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
           E L  G + N++ +N+++ CLCK G+I EA  L + M    L PD   Y+ L+ G C  G
Sbjct: 401 ETLSRGFKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLRLEPDFIVYSILIHGLCKEG 460

Query: 313 RIDTAREIFLSMH-SKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
            +  A +++  M   +   H      +L+ G  K  N+ EA + +       + + V+ Y
Sbjct: 461 FVQRAYQLYEQMRLKRKFPHHFAQRAVLL-GLFKNGNISEARNYFDTWTRMDLMEDVVLY 519

Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
           N ++ G  +      A +L+ +M    + P + T+N LI+G C+   + EA K+  ++ +
Sbjct: 520 NIMIDGYVRLDGIAEAMQLYYKMIERGITPSVVTFNTLINGFCRRGDLMEARKMLEVIRL 579

Query: 432 NKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEK 491
                 +  +  L++  C+ G +   +   H++    +VPT VTY+++I GLCR+ K+ +
Sbjct: 580 KGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANAVVPTHVTYTVLIKGLCRQNKMHE 639

Query: 492 ANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIV 551
           +   L YM   G  P+ VT+NT++  F +  + +K ++L + M     N  P   T+ ++
Sbjct: 640 SLQLLEYMYAKGLLPDSVTYNTIIQCFCKGKEITKALQLYNMML--LHNCDPTQVTYKVL 697

Query: 552 VDLL 555
           ++ L
Sbjct: 698 INAL 701



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 62/218 (28%), Positives = 113/218 (51%), Gaps = 8/218 (3%)

Query: 336 YNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMK 395
           +++L   Y +   + +A+ +  ++     + +V TYN+LL  +           +++E+K
Sbjct: 173 WDMLAFAYSRHEMIHDALFVIAKMKDLNFQASVPTYNSLLHNM---RHTDIMWDVYNEIK 229

Query: 396 LYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEF-GIEIFNCLIDGLCKAGRL 454
           +        T +ILI GLC+ + +++A+   H  + NK     I   N ++   CK G +
Sbjct: 230 VSGAPQSECTTSILIHGLCEQSKLEDAISFLH--DSNKVVGPSIVSINTIMSKFCKVGLI 287

Query: 455 DNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTL 514
           D A   F  + + GL+    +Y+I++HGLC  G +++A  F   MEK+G  P+VVT+NTL
Sbjct: 288 DVARSFFCLMVKNGLLHDSFSYNILLHGLCVAGSMDEALGFTDDMEKHGVEPDVVTYNTL 347

Query: 515 MHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVV 552
             GFL     S   +++ KM    + L PD  T++ ++
Sbjct: 348 AKGFLLLGLMSGARKVVQKML--LQGLNPDLVTYTTLI 383



 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 30/124 (24%), Positives = 62/124 (50%), Gaps = 4/124 (3%)

Query: 395 KLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRL 454
           K  N + +   +++L     ++  + +A+ +   ++   F+  +  +N L+  +      
Sbjct: 162 KFRNWDSNGLVWDMLAFAYSRHEMIHDALFVIAKMKDLNFQASVPTYNSLLHNM---RHT 218

Query: 455 DNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTL 514
           D  W++++++   G   +  T SI+IHGLC + KLE A  F L+       P++V+ NT+
Sbjct: 219 DIMWDVYNEIKVSGAPQSECTTSILIHGLCEQSKLEDAISF-LHDSNKVVGPSIVSINTI 277

Query: 515 MHGF 518
           M  F
Sbjct: 278 MSKF 281


>gi|224061569|ref|XP_002300545.1| predicted protein [Populus trichocarpa]
 gi|222847803|gb|EEE85350.1| predicted protein [Populus trichocarpa]
          Length = 567

 Score =  202 bits (514), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 141/512 (27%), Positives = 252/512 (49%), Gaps = 22/512 (4%)

Query: 67  THMQPSPPISSFNLLFGAVAK----NRHYDAVISFYRK--LVSIGLLPDFLTLNILINCF 120
           TH+  SP  S + L    V +    NR      +F+    +V  G  PD      L+   
Sbjct: 48  THITISPKDSVWTLSNWKVGRKDTRNRDIRLNDAFFHLEFIVRKGHKPDVAQATQLL--- 104

Query: 121 GNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVS 180
                 LC  N++K+AT + +  I  G+ PD  +Y  L+N  C+ GN+  A++L +KM  
Sbjct: 105 ----YDLCKSNKMKKATRVMEMTIESGIIPDAASYTFLVNNLCKRGNIGYAMQLVEKM-- 158

Query: 181 GDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCC 240
              ENG    TN  +Y+ ++  LCK G ++++ +L  ++  +G+ P     + L+     
Sbjct: 159 --EENG--CPTNTVTYNSLVRGLCKHGNLNQSLQLLDKLMRKGLVPNEFTHSFLLEAAYK 214

Query: 241 AGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFT 300
               +E   L   ++  G +PNL+++NV++  LCK G+  EA      +  +G NP+  +
Sbjct: 215 ERGVDEAMKLLDGIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIQFFRDLPSKGFNPNVVS 274

Query: 301 YNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQII 360
            N ++   C  GR + A E+   M S+    ++V+YNILI        ++ A  +  +++
Sbjct: 275 CNIILRSLCCEGRWEEANELVAEMDSEERSPSLVTYNILIGSLASHGRIQHAFQVLDEMM 334

Query: 361 SNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQ 420
               + +  T+N ++S L + G+A    K  D+M  +   P+  T+N  I  LC+   VQ
Sbjct: 335 RASFQPSAATFNPIISHLCKEGKADLVVKCLDQMIHHCCNPNDGTFNA-IAVLCEGGRVQ 393

Query: 421 EAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMI 480
            A  +   L   +     + +  +I  LC+ G    A++L +++ Q G VP   TYS +I
Sbjct: 394 RAFSIIQSLGNKQNSSTHDFYRGVISSLCRKGNTYPAFQLLYEMIQSGFVPDPYTYSSLI 453

Query: 481 HGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERN 540
            GLC +G L++A +    +E+N   P +  FN L+ GF ++ +T   +E+   M    + 
Sbjct: 454 RGLCVEGMLDEALEIFRLLEENDYRPILGNFNALILGFCKSGRTDLSLEIFEMMI--LKG 511

Query: 541 LVPDDTTFSIVVDLLAKDEKYHECSAVSKSSY 572
             P++TT++I+V+ +A +E+    + V K  Y
Sbjct: 512 YTPNETTYTILVEGIAHEEEKELAAEVLKELY 543



 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 133/479 (27%), Positives = 222/479 (46%), Gaps = 39/479 (8%)

Query: 54  INLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTL 113
           I LN+A +   ++      P ++    L   + K+             +  G++PD  + 
Sbjct: 76  IRLNDAFFHLEFIVRKGHKPDVAQATQLLYDLCKSNKMKKATRVMEMTIESGIIPDAASY 135

Query: 114 NILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALR 173
             L+N        LC    I  A  L + M   G   + +TY +L+ G C+ GNL+ +L+
Sbjct: 136 TFLVN-------NLCKRGNIGYAMQLVEKMEENGCPTNTVTYNSLVRGLCKHGNLNQSLQ 188

Query: 174 L---------------HKKMVSGDYE-----------NGLISK---TNIFSYSIIIDSLC 204
           L               H  ++   Y+           +G+I+K    N+ SY++++  LC
Sbjct: 189 LLDKLMRKGLVPNEFTHSFLLEAAYKERGVDEAMKLLDGIIAKGGKPNLVSYNVLLTGLC 248

Query: 205 KEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLL 264
           KEG  ++A + F ++  +G NP VV C  ++   CC G WEE N L  EM      P+L+
Sbjct: 249 KEGRTEEAIQFFRDLPSKGFNPNVVSCNIILRSLCCEGRWEEANELVAEMDSEERSPSLV 308

Query: 265 TFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSM 324
           T+N++I  L   G+I  A  +L+ M++    P   T+N ++   C  G+ D   +    M
Sbjct: 309 TYNILIGSLASHGRIQHAFQVLDEMMRASFQPSAATFNPIISHLCKEGKADLVVKCLDQM 368

Query: 325 HSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQA 384
               C     ++N  I   C+   V+ A S+ + + +     T   Y  ++S L + G  
Sbjct: 369 IHHCCNPNDGTFNA-IAVLCEGGRVQRAFSIIQSLGNKQNSSTHDFYRGVISSLCRKGNT 427

Query: 385 GYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCL 444
             A +L  EM      PD  TY+ LI GLC    + EA+++F +LE N +   +  FN L
Sbjct: 428 YPAFQLLYEMIQSGFVPDPYTYSSLIRGLCVEGMLDEALEIFRLLEENDYRPILGNFNAL 487

Query: 445 IDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFL--LYMEK 501
           I G CK+GR D + E+F  +  KG  P   TY+I++ G+  + + E A + L  LY+ +
Sbjct: 488 ILGFCKSGRTDLSLEIFEMMILKGYTPNETTYTILVEGIAHEEEKELAAEVLKELYIRQ 546



 Score =  122 bits (305), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 90/330 (27%), Positives = 148/330 (44%), Gaps = 20/330 (6%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
           P + S+N+L   + K    +  I F+R L S G  P+ ++ NI++       R LC E R
Sbjct: 235 PNLVSYNVLLTGLCKEGRTEEAIQFFRDLPSKGFNPNVVSCNIIL-------RSLCCEGR 287

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
            +EA  L   M +    P ++TY  LI      G +  A ++  +M+   ++       +
Sbjct: 288 WEEANELVAEMDSEERSPSLVTYNILIGSLASHGRIQHAFQVLDEMMRASFQ------PS 341

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
             +++ II  LCKEG  D   +   +M     NP       +     C G    V   F 
Sbjct: 342 AATFNPIISHLCKEGKADLVVKCLDQMIHHCCNPNDGTFNAI--AVLCEGG--RVQRAFS 397

Query: 253 EMLDLGPRPNLLT---FNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYC 309
            +  LG + N  T   +  +I  LC+ G    A  LL  MIQ G  PD +TY+SL+ G C
Sbjct: 398 IIQSLGNKQNSSTHDFYRGVISSLCRKGNTYPAFQLLYEMIQSGFVPDPYTYSSLIRGLC 457

Query: 310 LVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVI 369
           + G +D A EIF  +     +  + ++N LI G+CK    + ++ ++  +I  G      
Sbjct: 458 VEGMLDEALEIFRLLEENDYRPILGNFNALILGFCKSGRTDLSLEIFEMMILKGYTPNET 517

Query: 370 TYNTLLSGLFQAGQAGYAQKLFDEMKLYNV 399
           TY  L+ G+    +   A ++  E+ +  V
Sbjct: 518 TYTILVEGIAHEEEKELAAEVLKELYIRQV 547


>gi|357500061|ref|XP_003620319.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495334|gb|AES76537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 496

 Score =  202 bits (514), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 103/265 (38%), Positives = 154/265 (58%)

Query: 270 IDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGC 329
           +   CK GK+ EA  +   M+++G  P+  TY+SLMDGYCLV  ++ A+ IF +M   G 
Sbjct: 226 VSTFCKEGKVKEAKNVFAAMMKKGFKPNVVTYSSLMDGYCLVKEVNKAKSIFNNMAQGGV 285

Query: 330 KHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQK 389
              + SYNILING+CKI   + AM+L+ ++    +   V+TYN+L+ GL ++G+  YA K
Sbjct: 286 NPDIQSYNILINGFCKIKMTDAAMNLFEEMHCRKIIPNVVTYNSLIDGLCKSGKISYALK 345

Query: 390 LFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLC 449
           L DEM      PD+ TY+ L+D LCKN+   +A+ L   L+    +  +  +  LI+GLC
Sbjct: 346 LVDEMHDRGQPPDIITYSSLLDALCKNHPGDKAIALLTKLKDQGLQPNMYTYTILINGLC 405

Query: 450 KAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVV 509
           K GR ++A  +F  L  KG    V TY++MIH  C  G   +A   L  ME+NGC PN V
Sbjct: 406 KGGRPEDAQNIFEDLLVKGYNINVNTYTVMIHVFCNNGMFGEALAMLSKMEENGCIPNAV 465

Query: 510 TFNTLMHGFLQNNKTSKVVELLHKM 534
           T+  ++      ++  K  +LL +M
Sbjct: 466 TYEIIIRSLFDKDENDKAEKLLLEM 490



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 85/253 (33%), Positives = 136/253 (53%), Gaps = 3/253 (1%)

Query: 308 YCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQT 367
           +C  G++  A+ +F +M  KG K  VV+Y+ L++GYC +  V +A S++  +   GV   
Sbjct: 229 FCKEGKVKEAKNVFAAMMKKGFKPNVVTYSSLMDGYCLVKEVNKAKSIFNNMAQGGVNPD 288

Query: 368 VITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFH 427
           + +YN L++G  +      A  LF+EM    + P++ TYN LIDGLCK+  +  A+KL  
Sbjct: 289 IQSYNILINGFCKIKMTDAAMNLFEEMHCRKIIPNVVTYNSLIDGLCKSGKISYALKLVD 348

Query: 428 MLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKG 487
            +        I  ++ L+D LCK    D A  L  KL  +GL P + TY+I+I+GLC+ G
Sbjct: 349 EMHDRGQPPDIITYSSLLDALCKNHPGDKAIALLTKLKDQGLQPNMYTYTILINGLCKGG 408

Query: 488 KLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTT 547
           + E A +    +   G   NV T+  ++H F  N    + + +L KM   E   +P+  T
Sbjct: 409 RPEDAQNIFEDLLVKGYNINVNTYTVMIHVFCNNGMFGEALAMLSKME--ENGCIPNAVT 466

Query: 548 FSIVV-DLLAKDE 559
           + I++  L  KDE
Sbjct: 467 YEIIIRSLFDKDE 479



 Score =  142 bits (357), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 87/306 (28%), Positives = 149/306 (48%), Gaps = 39/306 (12%)

Query: 200 IDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGP 259
           + + CKEG V +AK +F  M  +G  P VV  ++L+ G+C      +   +F  M   G 
Sbjct: 226 VSTFCKEGKVKEAKNVFAAMMKKGFKPNVVTYSSLMDGYCLVKEVNKAKSIFNNMAQGGV 285

Query: 260 RPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTARE 319
            P++ ++N++I+  CK    + A  L E M  R + P+  TYNSL+DG C  G+I  A +
Sbjct: 286 NPDIQSYNILINGFCKIKMTDAAMNLFEEMHCRKIIPNVVTYNSLIDGLCKSGKISYALK 345

Query: 320 IFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLF 379
           +   MH +G    +++Y+ L++  CK    ++A++L  ++   G++  + TY  L++GL 
Sbjct: 346 LVDEMHDRGQPPDIITYSSLLDALCKNHPGDKAIALLTKLKDQGLQPNMYTYTILINGLC 405

Query: 380 QAGQAGYAQKLFDEM--KLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFG 437
           + G+   AQ +F+++  K YN+  +++TY ++I   C N    EA+ +   +E N     
Sbjct: 406 KGGRPEDAQNIFEDLLVKGYNI--NVNTYTVMIHVFCNNGMFGEALAMLSKMEEN----- 458

Query: 438 IEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLL 497
                                         G +P  VTY I+I  L  K + +KA   LL
Sbjct: 459 ------------------------------GCIPNAVTYEIIIRSLFDKDENDKAEKLLL 488

Query: 498 YMEKNG 503
            M   G
Sbjct: 489 EMITRG 494



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 84/317 (26%), Positives = 151/317 (47%), Gaps = 25/317 (7%)

Query: 50  KSGIINLNE--ARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLL 107
           +  + NL E    + F Y+  M P   +S+F        K        + +  ++  G  
Sbjct: 202 RGDVNNLRECFVSFMFQYLGMMAP---VSTF-------CKEGKVKEAKNVFAAMMKKGFK 251

Query: 108 PDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGN 167
           P+ +T + L++       G C+   + +A  +F NM   GV PD+ +Y  LINGFC+   
Sbjct: 252 PNVVTYSSLMD-------GYCLVKEVNKAKSIFNNMAQGGVNPDIQSYNILINGFCKIKM 304

Query: 168 LSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPA 227
              A+ L ++M    +   +I   N+ +Y+ +ID LCK G +  A +L  EM  RG  P 
Sbjct: 305 TDAAMNLFEEM----HCRKIIP--NVVTYNSLIDGLCKSGKISYALKLVDEMHDRGQPPD 358

Query: 228 VVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLE 287
           ++  ++L+   C     ++   L  ++ D G +PN+ T+ ++I+ LCKGG+  +A  + E
Sbjct: 359 IITYSSLLDALCKNHPGDKAIALLTKLKDQGLQPNMYTYTILINGLCKGGRPEDAQNIFE 418

Query: 288 LMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKIL 347
            ++ +G N +  TY  ++  +C  G    A  +   M   GC    V+Y I+I       
Sbjct: 419 DLLVKGYNINVNTYTVMIHVFCNNGMFGEALAMLSKMEENGCIPNAVTYEIIIRSLFDKD 478

Query: 348 NVEEAMSLYRQIISNGV 364
             ++A  L  ++I+ G+
Sbjct: 479 ENDKAEKLLLEMITRGL 495



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 54/183 (29%), Positives = 100/183 (54%), Gaps = 2/183 (1%)

Query: 375 LSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKF 434
           +S   + G+   A+ +F  M     +P++ TY+ L+DG C    V +A  +F+ +     
Sbjct: 226 VSTFCKEGKVKEAKNVFAAMMKKGFKPNVVTYSSLMDGYCLVKEVNKAKSIFNNMAQGGV 285

Query: 435 EFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKAND 494
              I+ +N LI+G CK    D A  LF ++  + ++P VVTY+ +I GLC+ GK+  A  
Sbjct: 286 NPDIQSYNILINGFCKIKMTDAAMNLFEEMHCRKIIPNVVTYNSLIDGLCKSGKISYALK 345

Query: 495 FLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDL 554
            +  M   G  P+++T+++L+    +N+   K + LL K+   ++ L P+  T++I+++ 
Sbjct: 346 LVDEMHDRGQPPDIITYSSLLDALCKNHPGDKAIALLTKLK--DQGLQPNMYTYTILING 403

Query: 555 LAK 557
           L K
Sbjct: 404 LCK 406


>gi|255572834|ref|XP_002527349.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223533268|gb|EEF35021.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 443

 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 113/339 (33%), Positives = 179/339 (52%), Gaps = 8/339 (2%)

Query: 159 INGFCRTGNLSVALRLHKKMV-SGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFL 217
           ++   R G L    R  + MV  GD         +I   + +I   CK G   KA  +  
Sbjct: 91  LSKLVRNGELEEGFRFLESMVYRGDI-------PDIIPCTSLIRGFCKIGKTRKATRIME 143

Query: 218 EMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGG 277
            ++  G  P V+    LI G C  G W +   L  +M+  G  P+++TFN++I+ LC+ G
Sbjct: 144 IIEDSGAVPDVITYNVLISGMCSTGRWMDAEKLLADMVRRGCSPSVVTFNILINFLCRKG 203

Query: 278 KINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYN 337
            +  A  +LE M + G  P+  +YN L+ G+C   +++ A E    M S+GC   +V+YN
Sbjct: 204 LLGRAIDVLEKMPKHGCTPNSLSYNPLLHGFCKEKKMERAIEYLGKMTSRGCYPDIVTYN 263

Query: 338 ILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLY 397
            L+   CK   V+ A+ L  Q+ S G    +ITYNT++ GL + G+   A KL DEM+  
Sbjct: 264 TLLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAAKLLDEMRAK 323

Query: 398 NVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNA 457
            ++PD+ TY+ L+ GL +   V EA+K FH LE+   +     +N ++ GLCKA + D A
Sbjct: 324 GLKPDIITYSSLVGGLSREGKVDEAIKFFHDLEVLGVKPNAITYNAIMLGLCKARKTDRA 383

Query: 458 WELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFL 496
            +    + Q+G  PT  +Y+I+I GL  +G  ++A + L
Sbjct: 384 IDFLAYMVQRGCKPTEASYTILIEGLAYEGLAKEALELL 422



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 112/366 (30%), Positives = 190/366 (51%), Gaps = 8/366 (2%)

Query: 177 KMVSGDYENGLISKTNIFSYSII--------IDSLCKEGLVDKAKELFLEMKGRGINPAV 228
           K+ +G   NG +S + I S +          +  L + G +++       M  RG  P +
Sbjct: 60  KLPNGHLGNGHVSLSPIHSLTNFEEIESNNNLSKLVRNGELEEGFRFLESMVYRGDIPDI 119

Query: 229 VVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLEL 288
           + CT+LI GFC  G   +   +   + D G  P+++T+NV+I  +C  G+  +A  LL  
Sbjct: 120 IPCTSLIRGFCKIGKTRKATRIMEIIEDSGAVPDVITYNVLISGMCSTGRWMDAEKLLAD 179

Query: 289 MIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILN 348
           M++RG +P   T+N L++  C  G +  A ++   M   GC    +SYN L++G+CK   
Sbjct: 180 MVRRGCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPKHGCTPNSLSYNPLLHGFCKEKK 239

Query: 349 VEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNI 408
           +E A+    ++ S G    ++TYNTLL+ L + G+   A +L +++      P L TYN 
Sbjct: 240 MERAIEYLGKMTSRGCYPDIVTYNTLLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNT 299

Query: 409 LIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKG 468
           +IDGL K     +A KL   +     +  I  ++ L+ GL + G++D A + FH L   G
Sbjct: 300 VIDGLSKVGKTDQAAKLLDEMRAKGLKPDIITYSSLVGGLSREGKVDEAIKFFHDLEVLG 359

Query: 469 LVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVV 528
           + P  +TY+ ++ GLC+  K ++A DFL YM + GC P   ++  L+ G        + +
Sbjct: 360 VKPNAITYNAIMLGLCKARKTDRAIDFLAYMVQRGCKPTEASYTILIEGLAYEGLAKEAL 419

Query: 529 ELLHKM 534
           ELL+++
Sbjct: 420 ELLNEL 425



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 100/315 (31%), Positives = 166/315 (52%), Gaps = 2/315 (0%)

Query: 242 GNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTY 301
           G  EE       M+  G  P+++    +I   CK GK  +A  ++E++   G  PD  TY
Sbjct: 98  GELEEGFRFLESMVYRGDIPDIIPCTSLIRGFCKIGKTRKATRIMEIIEDSGAVPDVITY 157

Query: 302 NSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIIS 361
           N L+ G C  GR   A ++   M  +GC  +VV++NILIN  C+   +  A+ +  ++  
Sbjct: 158 NVLISGMCSTGRWMDAEKLLADMVRRGCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPK 217

Query: 362 NGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQE 421
           +G     ++YN LL G  +  +   A +   +M      PD+ TYN L+  LCK+  V  
Sbjct: 218 HGCTPNSLSYNPLLHGFCKEKKMERAIEYLGKMTSRGCYPDIVTYNTLLTALCKDGKVDA 277

Query: 422 AVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIH 481
           AV+L + L        +  +N +IDGL K G+ D A +L  ++  KGL P ++TYS ++ 
Sbjct: 278 AVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAAKLLDEMRAKGLKPDIITYSSLVG 337

Query: 482 GLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNL 541
           GL R+GK+++A  F   +E  G  PN +T+N +M G  +  KT + ++ L  M   +R  
Sbjct: 338 GLSREGKVDEAIKFFHDLEVLGVKPNAITYNAIMLGLCKARKTDRAIDFLAYMV--QRGC 395

Query: 542 VPDDTTFSIVVDLLA 556
            P + +++I+++ LA
Sbjct: 396 KPTEASYTILIEGLA 410



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 110/376 (29%), Positives = 176/376 (46%), Gaps = 21/376 (5%)

Query: 38  ETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSP---PISSFNLLFGAVAKNRHYDAV 94
           E + N  L +  ++G   L E   F   M +    P   P +S    F  + K R    +
Sbjct: 84  EIESNNNLSKLVRNG--ELEEGFRFLESMVYRGDIPDIIPCTSLIRGFCKIGKTRKATRI 141

Query: 95  ISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVIT 154
           +     +   G +PD +T N+LI+       G+C   R  +A  L  +M+  G  P V+T
Sbjct: 142 MEI---IEDSGAVPDVITYNVLIS-------GMCSTGRWMDAEKLLADMVRRGCSPSVVT 191

Query: 155 YGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKE 214
           +  LIN  CR G L  A+ + +KM     ++G     N  SY+ ++   CKE  +++A E
Sbjct: 192 FNILINFLCRKGLLGRAIDVLEKMP----KHGCTP--NSLSYNPLLHGFCKEKKMERAIE 245

Query: 215 LFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLC 274
              +M  RG  P +V   TL+   C  G  +    L  ++   G  P L+T+N +ID L 
Sbjct: 246 YLGKMTSRGCYPDIVTYNTLLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLS 305

Query: 275 KGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVV 334
           K GK ++A  LL+ M  +GL PD  TY+SL+ G    G++D A + F  +   G K   +
Sbjct: 306 KVGKTDQAAKLLDEMRAKGLKPDIITYSSLVGGLSREGKVDEAIKFFHDLEVLGVKPNAI 365

Query: 335 SYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEM 394
           +YN ++ G CK    + A+     ++  G + T  +Y  L+ GL   G A  A +L +E+
Sbjct: 366 TYNAIMLGLCKARKTDRAIDFLAYMVQRGCKPTEASYTILIEGLAYEGLAKEALELLNEL 425

Query: 395 KLYNVEPDLSTYNILI 410
            L  V    S   + +
Sbjct: 426 CLRGVVKKSSAEKVAV 441


>gi|225423589|ref|XP_002275605.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Vitis vinifera]
          Length = 644

 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 149/520 (28%), Positives = 249/520 (47%), Gaps = 33/520 (6%)

Query: 61  YFFGYMTHMQPSP-----PISSFNLLFGAVAKNRHYDAVIS-FYRKLVSIGLLPDFLTLN 114
           +FF + +    SP     PI   + +F + ++   Y +  S FY  + +     DF TL 
Sbjct: 27  WFFSFRSKTTLSPYESDAPIP--DQIFKSASQMGSYKSGDSTFYSLIENYANSGDFGTLF 84

Query: 115 ILINCFGNKERGLCVENRI------------KEATWLFKNMI-AFGVRPDVITYGTLING 161
            + +    + R    +N I            ++A  LF  M+  F  R  V ++ +++N 
Sbjct: 85  QVFDRMKRERRVFIEKNFILVFRAYGKAHLPEKAIELFGRMVDEFQCRRTVRSFNSVLNV 144

Query: 162 FCRTGNLSVALRLHKKMVSGDYENGLISKTNI----FSYSIIIDSLCKEGLVDKAKELFL 217
             + G    AL          YE G+  KTNI     S++++I ++CK GLVD+A E+F 
Sbjct: 145 IIQEGLFHRALEF--------YECGVGGKTNISPNVLSFNLVIKAMCKLGLVDRAIEVFR 196

Query: 218 EMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGG 277
           EM  +   P V    TL+ G C     +E   L  EM   G  P+ +TFNV+I+ LCK G
Sbjct: 197 EMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTFNVLINGLCKKG 256

Query: 278 KINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYN 337
            +     L++ M  +G  P+  TYN++++G CL G++D A  +   M +  C    V+Y 
Sbjct: 257 DMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVASKCVPNDVTYG 316

Query: 338 ILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLY 397
            LING  K     + + L   +   G       Y+TL+SGLF+  ++  A  L+ +M   
Sbjct: 317 TLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEK 376

Query: 398 NVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNA 457
             +P++  Y+ LIDGLC+   + EA ++   +           ++ LI G  K G    A
Sbjct: 377 GCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKA 436

Query: 458 WELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHG 517
             ++ ++ +   VP  + YS++IHGLC  GKL +A     +M   G  P+VV +++++HG
Sbjct: 437 IRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHG 496

Query: 518 FLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAK 557
                     ++L ++M   E +  PD  T++I++  L K
Sbjct: 497 LCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILLRALCK 536



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 144/538 (26%), Positives = 252/538 (46%), Gaps = 20/538 (3%)

Query: 22  SSLFKSPRQIAAVSSPETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLL 81
             +FKS  Q+ +  S ++     +     SG  +       F  M   +      +F L+
Sbjct: 48  DQIFKSASQMGSYKSGDSTFYSLIENYANSG--DFGTLFQVFDRMKRERRVFIEKNFILV 105

Query: 82  FGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFK 141
           F A  K    +  I  + ++V      D       +  F +    +  E     A   ++
Sbjct: 106 FRAYGKAHLPEKAIELFGRMV------DEFQCRRTVRSFNSVLNVIIQEGLFHRALEFYE 159

Query: 142 NMIA--FGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSII 199
             +     + P+V+++  +I   C+ G +  A+ + ++M     E       ++F+Y  +
Sbjct: 160 CGVGGKTNISPNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKCE------PDVFTYCTL 213

Query: 200 IDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGP 259
           +D LCKE  +D+A  L  EM+  G  P+ V    LI+G C  G+   V  L   M   G 
Sbjct: 214 MDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGC 273

Query: 260 RPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTARE 319
            PN +T+N +I+ LC  GK+++A  LL+ M+     P+  TY +L++G    GR      
Sbjct: 274 VPNEVTYNTIINGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVH 333

Query: 320 IFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLF 379
           +  S+  +G      +Y+ LI+G  K    EEAM L+++++  G +  ++ Y+ L+ GL 
Sbjct: 334 LLSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLC 393

Query: 380 QAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIE 439
           + G+   A+++  EM      P+  TY+ LI G  K    Q+A++++  +  N       
Sbjct: 394 REGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEI 453

Query: 440 IFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYM 499
            ++ LI GLC+ G+L  A  ++  +  +GL P VV YS MIHGLC  G +E        M
Sbjct: 454 CYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEM 513

Query: 500 --EKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLL 555
             +++   P+VVT+N L+    + N  S  ++LL+ M   +R   PD  T +I ++ L
Sbjct: 514 LCQESDSQPDVVTYNILLRALCKQNSISHAIDLLNSML--DRGCNPDLITCNIFLNAL 569



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 128/419 (30%), Positives = 204/419 (48%), Gaps = 23/419 (5%)

Query: 154 TYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAK 213
           T+ +LI  +  +G+     ++  +M     E  +  + N   + ++  +  K  L +KA 
Sbjct: 66  TFYSLIENYANSGDFGTLFQVFDRM---KRERRVFIEKN---FILVFRAYGKAHLPEKAI 119

Query: 214 ELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDL---------GPRPNLL 264
           ELF    GR ++     C   +  F    N     GLF   L+             PN+L
Sbjct: 120 ELF----GRMVDE--FQCRRTVRSFNSVLNVIIQEGLFHRALEFYECGVGGKTNISPNVL 173

Query: 265 TFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSM 324
           +FN++I  +CK G ++ A  +   M  +   PD FTY +LMDG C   RID A  +   M
Sbjct: 174 SFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEM 233

Query: 325 HSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQA 384
             +GC  + V++N+LING CK  ++     L   +   G     +TYNT+++GL   G+ 
Sbjct: 234 QIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKL 293

Query: 385 GYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCL 444
             A  L D M      P+  TY  LI+GL K     + V L   LE          ++ L
Sbjct: 294 DKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTL 353

Query: 445 IDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGC 504
           I GL K  + + A  L+ K+ +KG  P +V YS +I GLCR+GKL++A + L  M   GC
Sbjct: 354 ISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGC 413

Query: 505 APNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
            PN  T+++L+ GF +   + K + +  +MA  + N VP++  +S+++  L +D K  E
Sbjct: 414 TPNAFTYSSLIKGFFKTGNSQKAIRVWKEMA--KNNCVPNEICYSVLIHGLCEDGKLRE 470



 Score =  122 bits (306), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 107/417 (25%), Positives = 172/417 (41%), Gaps = 87/417 (20%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
           P   +FN+L   + K      V      +   G +P+ +T N +IN       GLC++ +
Sbjct: 240 PSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIIN-------GLCLKGK 292

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRL---------------HKK 177
           + +A  L   M+A    P+ +TYGTLING  + G     + L               +  
Sbjct: 293 LDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYST 352

Query: 178 MVSGDYEN-------GLISK-------TNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRG 223
           ++SG ++        GL  K        NI  YS +ID LC+EG +D+AKE+  EM  +G
Sbjct: 353 LISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKG 412

Query: 224 INPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEAN 283
             P     ++LI GF   GN ++   ++ EM      PN + ++V+I  LC+ GK+ EA 
Sbjct: 413 CTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAM 472

Query: 284 GLLELMIQRGL-------------------------------------NPDRFTYNSLMD 306
            +   M+ RGL                                      PD  TYN L+ 
Sbjct: 473 MMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILLR 532

Query: 307 GYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQ 366
             C    I  A ++  SM  +GC   +++ NI +N   + LN  +    +          
Sbjct: 533 ALCKQNSISHAIDLLNSMLDRGCNPDLITCNIFLNALREKLNPPQDGREF---------- 582

Query: 367 TVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAV 423
                + L+  L +  +   A K+ + M    + P+ ST+  +I  LCK   VQ  +
Sbjct: 583 ----LDELVVRLHKRQRIVGAAKIIEVMLQKFLPPNASTWERIIPELCKPKKVQAII 635


>gi|414591640|tpg|DAA42211.1| TPA: hypothetical protein ZEAMMB73_215753 [Zea mays]
          Length = 299

 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 105/276 (38%), Positives = 163/276 (59%), Gaps = 2/276 (0%)

Query: 281 EANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILI 340
           +A  + +L +  GL+PD   Y+ LMDGYCLVG+++ A  +F +M S G +  VV Y  L+
Sbjct: 2   DAQNIFDLKVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLV 61

Query: 341 NGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVE 400
           NGYCKI  ++E +SL+R+++  G++ + I Y+ ++ GLFQAG+   A+  F EM    + 
Sbjct: 62  NGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKVKFHEMTESGIA 121

Query: 401 PDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWEL 460
            D+ TYNI++ GL KN C  EA+ LF  L     +  I   N +IDG+ +  R++ A +L
Sbjct: 122 MDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDL 181

Query: 461 FHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQ 520
           F  + +  LVP+VVTYSIMI  L ++G +E+A D    M+  GC PN    N ++   L+
Sbjct: 182 FASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLK 241

Query: 521 NNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLA 556
            N+  +    L K+   ERN   +  T  ++VDL +
Sbjct: 242 KNEIVRAGAYLSKI--DERNFSLEHLTTMLLVDLFS 275



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 75/274 (27%), Positives = 136/274 (49%)

Query: 223 GINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEA 282
           G++P  VV + L+ G+C  G  E+   +F  M+  G  PN++ +  +++  CK G+I+E 
Sbjct: 14  GLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEG 73

Query: 283 NGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILING 342
             L   M+QRG+ P    Y+ ++DG    GR   A+  F  M   G    + +YNI++ G
Sbjct: 74  LSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKVKFHEMTESGIAMDICTYNIVLRG 133

Query: 343 YCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPD 402
             K    +EA+ L++++ +  V+  +IT NT++ G+FQ  +   A+ LF  +    + P 
Sbjct: 134 LFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPS 193

Query: 403 LSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFH 462
           + TY+I+I  L K   V+EA  +F  ++    E    + N ++  L K   +  A     
Sbjct: 194 VVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRAGAYLS 253

Query: 463 KLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFL 496
           K+ ++      +T  +++     KG   +   FL
Sbjct: 254 KIDERNFSLEHLTTMLLVDLFSSKGTCREHIRFL 287



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 65/251 (25%), Positives = 133/251 (52%)

Query: 246 EVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLM 305
           +   +F   +++G  P+ + +++++D  C  GK+ +A  + + M+  G+ P+   Y +L+
Sbjct: 2   DAQNIFDLKVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLV 61

Query: 306 DGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVR 365
           +GYC +GRID    +F  M  +G K + + Y+I+I+G  +      A   + ++  +G+ 
Sbjct: 62  NGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKVKFHEMTESGIA 121

Query: 366 QTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKL 425
             + TYN +L GLF+      A  LF E++  NV+ ++ T N +IDG+ +   V+EA  L
Sbjct: 122 MDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDL 181

Query: 426 FHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCR 485
           F  +  ++    +  ++ +I  L K G ++ A ++F  +   G  P     + ++  L +
Sbjct: 182 FASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLK 241

Query: 486 KGKLEKANDFL 496
           K ++ +A  +L
Sbjct: 242 KNEIVRAGAYL 252



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 68/227 (29%), Positives = 117/227 (51%)

Query: 196 YSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEML 255
           YS+++D  C  G ++KA  +F  M   GI P VVV  TL++G+C  G  +E   LF EML
Sbjct: 22  YSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREML 81

Query: 256 DLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRID 315
             G +P+ + ++++ID L + G+   A      M + G+  D  TYN ++ G       D
Sbjct: 82  QRGIKPSTILYSIIIDGLFQAGRTVPAKVKFHEMTESGIAMDICTYNIVLRGLFKNRCFD 141

Query: 316 TAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLL 375
            A  +F  + +   K  +++ N +I+G  +   VEEA  L+  I  + +  +V+TY+ ++
Sbjct: 142 EAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMI 201

Query: 376 SGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEA 422
           + L + G    A+ +F  M+    EP+    N ++  L K N +  A
Sbjct: 202 TNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRA 248



 Score =  108 bits (270), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 73/292 (25%), Positives = 135/292 (46%), Gaps = 6/292 (2%)

Query: 135 EATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIF 194
           +A  +F   +  G+ PD + Y  L++G+C  G +  ALR+   MVS   E       N+ 
Sbjct: 2   DAQNIFDLKVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIE------PNVV 55

Query: 195 SYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEM 254
            Y  +++  CK G +D+   LF EM  RGI P+ ++ + +I G   AG        F EM
Sbjct: 56  VYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKVKFHEM 115

Query: 255 LDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRI 314
            + G   ++ T+N+++  L K    +EA  L + +    +  +  T N+++DG     R+
Sbjct: 116 TESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRV 175

Query: 315 DTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTL 374
           + A+++F S+       +VV+Y+I+I    K   VEEA  ++  + + G        N +
Sbjct: 176 EEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHV 235

Query: 375 LSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLF 426
           +  L +  +   A     ++   N   +  T  +L+D        +E ++  
Sbjct: 236 VRELLKKNEIVRAGAYLSKIDERNFSLEHLTTMLLVDLFSSKGTCREHIRFL 287



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 66/229 (28%), Positives = 120/229 (52%), Gaps = 13/229 (5%)

Query: 102 VSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLING 161
           V++GL PD +  ++L++       G C+  ++++A  +F  M++ G+ P+V+ Y TL+NG
Sbjct: 11  VNVGLHPDAVVYSMLMD-------GYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNG 63

Query: 162 FCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKG 221
           +C+ G +   L L ++M+    + G+  K +   YSIIID L + G    AK  F EM  
Sbjct: 64  YCKIGRIDEGLSLFREML----QRGI--KPSTILYSIIIDGLFQAGRTVPAKVKFHEMTE 117

Query: 222 RGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINE 281
            GI   +     ++ G      ++E   LF E+  +  + N++T N MID + +  ++ E
Sbjct: 118 SGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEE 177

Query: 282 ANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCK 330
           A  L   + +  L P   TY+ ++      G ++ A ++F SM + GC+
Sbjct: 178 AKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCE 226



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 52/208 (25%), Positives = 104/208 (50%), Gaps = 2/208 (0%)

Query: 351 EAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILI 410
           +A +++   ++ G+    + Y+ L+ G    G+   A ++FD M    +EP++  Y  L+
Sbjct: 2   DAQNIFDLKVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLV 61

Query: 411 DGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLV 470
           +G CK   + E + LF  +     +    +++ +IDGL +AGR   A   FH++ + G+ 
Sbjct: 62  NGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKVKFHEMTESGIA 121

Query: 471 PTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVEL 530
             + TY+I++ GL +    ++A      +       N++T NT++ G  Q  +  +  +L
Sbjct: 122 MDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDL 181

Query: 531 LHKMAEPERNLVPDDTTFSIVVDLLAKD 558
              ++     LVP   T+SI++  L K+
Sbjct: 182 FASISRSR--LVPSVVTYSIMITNLIKE 207



 Score = 50.1 bits (118), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 40/168 (23%), Positives = 73/168 (43%), Gaps = 48/168 (28%)

Query: 59  ARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILIN 118
           A+  F  MT    +  I ++N++   + KNR +D  I  +++L ++ +  + +TLN +I+
Sbjct: 108 AKVKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMID 167

Query: 119 CFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKM 178
                  G+    R++EA  LF ++    + P V+TY                       
Sbjct: 168 -------GMFQTRRVEEAKDLFASISRSRLVPSVVTY----------------------- 197

Query: 179 VSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINP 226
                             SI+I +L KEGLV++A+++F  M+  G  P
Sbjct: 198 ------------------SIMITNLIKEGLVEEAEDMFSSMQNAGCEP 227


>gi|357121540|ref|XP_003562477.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g32630-like [Brachypodium distachyon]
          Length = 556

 Score =  202 bits (513), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 116/408 (28%), Positives = 207/408 (50%), Gaps = 8/408 (1%)

Query: 153 ITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKA 212
           ++   +++GFC++G++  A  L  ++    +  GL    N   Y+ ++DS  ++   D  
Sbjct: 149 LSASVVVDGFCKSGSVDDAHGLLDELPR--HGVGL----NACCYNSLLDSYTRQRNDDAV 202

Query: 213 KELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDC 272
             L  EM+ RG+ P V   T L+ G   AG+  +V  ++ EM       ++  ++ +I+ 
Sbjct: 203 AGLLKEMENRGVEPTVGTYTILVDGLSRAGDISKVEAVYDEMKRKNVAGDVYFYSAVINA 262

Query: 273 LCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHT 332
            C+GG +  A+ + +  +  G+ P+  TY +L++G+C +G+I+ A  +   M  +G  H 
Sbjct: 263 YCRGGNVRRASEVFDECVGHGVEPNERTYGALINGFCKIGQIEAAEMLLADMQLRGVGHN 322

Query: 333 VVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFD 392
            + +N +I+GYC+   VE+A+ +   +   G+   + TYNTL  GL +  +   A+KL  
Sbjct: 323 QIVFNTMIDGYCRHGMVEKALEIKAVMEKMGIELDIYTYNTLACGLCRVNRMEDAKKLLH 382

Query: 393 EMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAG 452
            M    V P+  +Y  LI    K   + EA +LF  +E       +  +N +IDG  K G
Sbjct: 383 IMAEKGVAPNYVSYTTLISIHAKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKNG 442

Query: 453 RLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFN 512
            +  A     ++ +KGLVP + TY+ ++HG C  GK++ A      M+  G  PNVV + 
Sbjct: 443 SIREAERFKKEMEKKGLVPDIYTYAGLVHGHCVNGKVDVALRLFEEMKHRGTKPNVVAYT 502

Query: 513 TLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEK 560
            L+ G  +  ++ +  +L   M      L PDDT +S++V  L  D +
Sbjct: 503 ALVSGLAKEGRSEEAFQLYDDMLAA--GLTPDDTLYSVLVGSLHTDSR 548



 Score =  191 bits (486), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 116/360 (32%), Positives = 183/360 (50%), Gaps = 17/360 (4%)

Query: 139 LFKNMIAFGVRPDVITYGTLINGFCRTGNLS----VALRLHKKMVSGDYENGLISKTNIF 194
           L K M   GV P V TY  L++G  R G++S    V   + +K V+GD          ++
Sbjct: 205 LLKEMENRGVEPTVGTYTILVDGLSRAGDISKVEAVYDEMKRKNVAGD----------VY 254

Query: 195 SYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEM 254
            YS +I++ C+ G V +A E+F E  G G+ P       LI+GFC  G  E    L  +M
Sbjct: 255 FYSAVINAYCRGGNVRRASEVFDECVGHGVEPNERTYGALINGFCKIGQIEAAEMLLADM 314

Query: 255 LDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRI 314
              G   N + FN MID  C+ G + +A  +  +M + G+  D +TYN+L  G C V R+
Sbjct: 315 QLRGVGHNQIVFNTMIDGYCRHGMVEKALEIKAVMEKMGIELDIYTYNTLACGLCRVNRM 374

Query: 315 DTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTL 374
           + A+++   M  KG     VSY  LI+ + K  ++ EA  L+R +   G R +V+TYN +
Sbjct: 375 EDAKKLLHIMAEKGVAPNYVSYTTLISIHAKEGDMVEARRLFRDMEGKGSRPSVVTYNVM 434

Query: 375 LSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKF 434
           + G  + G    A++   EM+   + PD+ TY  L+ G C N  V  A++LF  ++    
Sbjct: 435 IDGYIKNGSIREAERFKKEMEKKGLVPDIYTYAGLVHGHCVNGKVDVALRLFEEMKHRGT 494

Query: 435 EFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMI---HGLCRKGKLEK 491
           +  +  +  L+ GL K GR + A++L+  +   GL P    YS+++   H   RK  L +
Sbjct: 495 KPNVVAYTALVSGLAKEGRSEEAFQLYDDMLAAGLTPDDTLYSVLVGSLHTDSRKDPLPR 554



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 96/335 (28%), Positives = 160/335 (47%), Gaps = 36/335 (10%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
           P + ++ +L   +++      V + Y ++    +  D    + +IN +       C    
Sbjct: 216 PTVGTYTILVDGLSRAGDISKVEAVYDEMKRKNVAGDVYFYSAVINAY-------CRGGN 268

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRL----------HKK----- 177
           ++ A+ +F   +  GV P+  TYG LINGFC+ G +  A  L          H +     
Sbjct: 269 VRRASEVFDECVGHGVEPNERTYGALINGFCKIGQIEAAEMLLADMQLRGVGHNQIVFNT 328

Query: 178 MVSGDYENGLISKT--------------NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRG 223
           M+ G   +G++ K               +I++Y+ +   LC+   ++ AK+L   M  +G
Sbjct: 329 MIDGYCRHGMVEKALEIKAVMEKMGIELDIYTYNTLACGLCRVNRMEDAKKLLHIMAEKG 388

Query: 224 INPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEAN 283
           + P  V  TTLI      G+  E   LF +M   G RP+++T+NVMID   K G I EA 
Sbjct: 389 VAPNYVSYTTLISIHAKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKNGSIREAE 448

Query: 284 GLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGY 343
              + M ++GL PD +TY  L+ G+C+ G++D A  +F  M  +G K  VV+Y  L++G 
Sbjct: 449 RFKKEMEKKGLVPDIYTYAGLVHGHCVNGKVDVALRLFEEMKHRGTKPNVVAYTALVSGL 508

Query: 344 CKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGL 378
            K    EEA  LY  +++ G+      Y+ L+  L
Sbjct: 509 AKEGRSEEAFQLYDDMLAAGLTPDDTLYSVLVGSL 543



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 72/267 (26%), Positives = 125/267 (46%), Gaps = 47/267 (17%)

Query: 332 TVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLF 391
           T +S +++++G+CK  +V++A  L  ++  +GV      YN+LL    +         L 
Sbjct: 147 TPLSASVVVDGFCKSGSVDDAHGLLDELPRHGVGLNACCYNSLLDSYTRQRNDDAVAGLL 206

Query: 392 DEMKLYNVEPDLSTYNILIDGL-----------------------------------CKN 416
            EM+   VEP + TY IL+DGL                                   C+ 
Sbjct: 207 KEMENRGVEPTVGTYTILVDGLSRAGDISKVEAVYDEMKRKNVAGDVYFYSAVINAYCRG 266

Query: 417 NCVQEAVKLF-----HMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVP 471
             V+ A ++F     H +E N+  +G      LI+G CK G+++ A  L   +  +G+  
Sbjct: 267 GNVRRASEVFDECVGHGVEPNERTYG-----ALINGFCKIGQIEAAEMLLADMQLRGVGH 321

Query: 472 TVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELL 531
             + ++ MI G CR G +EKA +    MEK G   ++ T+NTL  G  + N+     +LL
Sbjct: 322 NQIVFNTMIDGYCRHGMVEKALEIKAVMEKMGIELDIYTYNTLACGLCRVNRMEDAKKLL 381

Query: 532 HKMAEPERNLVPDDTTFSIVVDLLAKD 558
           H MA  E+ + P+  +++ ++ + AK+
Sbjct: 382 HIMA--EKGVAPNYVSYTTLISIHAKE 406



 Score = 62.4 bits (150), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 40/156 (25%), Positives = 71/156 (45%), Gaps = 13/156 (8%)

Query: 55  NLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLN 114
           ++ EAR  F  M      P + ++N++     KN        F +++   GL+PD  T  
Sbjct: 408 DMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKNGSIREAERFKKEMEKKGLVPDIYTYA 467

Query: 115 ILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRL 174
            L++       G CV  ++  A  LF+ M   G +P+V+ Y  L++G  + G    A +L
Sbjct: 468 GLVH-------GHCVNGKVDVALRLFEEMKHRGTKPNVVAYTALVSGLAKEGRSEEAFQL 520

Query: 175 HKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVD 210
           +  M++     GL     +  YS+++ SL  +   D
Sbjct: 521 YDDMLAA----GLTPDDTL--YSVLVGSLHTDSRKD 550


>gi|413955492|gb|AFW88141.1| hypothetical protein ZEAMMB73_138069 [Zea mays]
          Length = 1091

 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 133/507 (26%), Positives = 241/507 (47%), Gaps = 38/507 (7%)

Query: 58  EARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILI 117
           EA   +  M     SP + ++++L  A  K R  D V+    ++ + G+ P+  +  I I
Sbjct: 189 EAMEVYKAMVEDGISPSVRTYSVLMVAFGKKRDVDTVLWLLNEMEARGVKPNVYSYTICI 248

Query: 118 NCFGNKER----------------------------GLCVENRIKEATWLFKNMIAFGVR 149
              G   R                             LC   R+ +A  +F  M A   +
Sbjct: 249 RVLGQAARFDEAYHILGKMEDSGCKPDVVTHTVIIQVLCDAGRLSDAKAVFWKMKASDQK 308

Query: 150 PDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLV 209
           PD +TY TL++    +G+    + +   MV+  Y +      NI SY+ ++D+LC+ G V
Sbjct: 309 PDRVTYITLLDKCGDSGDSQSVVEVWNAMVADGYND------NIVSYTAVVDALCQVGRV 362

Query: 210 DKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVM 269
           D+A  +F EMK +G++P      +LI GF  A  ++    LF  M   GP PN  T  + 
Sbjct: 363 DEALAVFDEMKEKGMSPEQYSYNSLISGFLKADMFDRALELFNHMNACGPSPNGYTHVLF 422

Query: 270 IDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGC 329
           I+   K G+  +A    E M  +G+ PD    N+++      GR+  A+ +F  + + G 
Sbjct: 423 INYYGKSGQSLKAIQRYEHMKSKGIVPDVAAANAVLYSLAGSGRLGMAKRVFYELKAMGV 482

Query: 330 KHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQK 389
               ++Y ++I    K    +EAM+ +  ++ +G    V+  N+L+  L++ G+   A +
Sbjct: 483 SPDTITYTMMIKCCSKASKADEAMNFFSDMVESGCVPDVLALNSLIDTLYKGGKGNEAWQ 542

Query: 390 LFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLC 449
           LF ++K   +EP   TYN L+ GL +   V+E ++L   +    +   +  +N ++D L 
Sbjct: 543 LFHKLKEMKIEPTNGTYNTLLSGLGREGKVKEVMQLLEEMTRTIYPPNLITYNTVLDCLS 602

Query: 450 KAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVV 509
           K G ++ A ++ + + +KG  P + +Y+ +++GL ++ +LE+A      M+K   AP+  
Sbjct: 603 KNGEVNCAIDMLYSMTEKGCAPDLSSYNTVMYGLIKEERLEEAFRMFCQMKKI-LAPDYA 661

Query: 510 TFNTLMHGFLQNNKTSKVVELLHKMAE 536
           T  T++  F++N       E LH + E
Sbjct: 662 TLCTILPSFVKNGLMK---EALHTVKE 685



 Score =  198 bits (504), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 142/515 (27%), Positives = 243/515 (47%), Gaps = 19/515 (3%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
           N  L+    SG   L  A+  F  +  M  SP   ++ ++    +K    D  ++F+  +
Sbjct: 455 NAVLYSLAGSG--RLGMAKRVFYELKAMGVSPDTITYTMMIKCCSKASKADEAMNFFSDM 512

Query: 102 VSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLING 161
           V  G +PD L LN LI+      +G        EA  LF  +    + P   TY TL++G
Sbjct: 513 VESGCVPDVLALNSLIDTLYKGGKG-------NEAWQLFHKLKEMKIEPTNGTYNTLLSG 565

Query: 162 FCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKG 221
             R G +   ++L ++M    Y        N+ +Y+ ++D L K G V+ A ++   M  
Sbjct: 566 LGREGKVKEVMQLLEEMTRTIY------PPNLITYNTVLDCLSKNGEVNCAIDMLYSMTE 619

Query: 222 RGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINE 281
           +G  P +    T+++G       EE   +F +M  +   P+  T   ++    K G + E
Sbjct: 620 KGCAPDLSSYNTVMYGLIKEERLEEAFRMFCQMKKI-LAPDYATLCTILPSFVKNGLMKE 678

Query: 282 A-NGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILI 340
           A + + E +++ G N D+ +++SLM+G      ++ + E   ++ S+G          LI
Sbjct: 679 ALHTVKEYILKAGCNVDKSSFHSLMEGILKKAGVEKSIEFAENIASRGILLNDFFLCPLI 738

Query: 341 NGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVE 400
              CK     EA  L+ +    GV     +YN+L+ GL        A+ LF EMK     
Sbjct: 739 RHLCKHKKALEAHQLFNKFKGLGVSLKTGSYNSLIRGLVDENLIDIAEDLFTEMKRLGCG 798

Query: 401 PDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWEL 460
           PD  TYN+++D + K+  V+E +K+   +    +E     +N +I GL K+ RL+ A +L
Sbjct: 799 PDEFTYNLILDAMGKSMRVEEMLKVQKEMHRKGYESTYVTYNTIISGLVKSKRLEQAIDL 858

Query: 461 FHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQ 520
           ++ L  +G  PT  TY  ++ GL + GK+  A +    M + GC PN   +N L++G   
Sbjct: 859 YYNLMSEGFSPTPCTYGPLLDGLLKSGKMVDAENLFNEMLEYGCEPNCTIYNILLNGHRI 918

Query: 521 NNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLL 555
              T  V +L  KM   E+ + PD  +++I++D L
Sbjct: 919 AGNTENVCQLFEKMV--EQGINPDIKSYTILIDTL 951



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 133/488 (27%), Positives = 225/488 (46%), Gaps = 36/488 (7%)

Query: 57   NEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNIL 116
            NEA   F  +  M+  P   ++N L   + +      V+    ++      P+ +T N +
Sbjct: 538  NEAWQLFHKLKEMKIEPTNGTYNTLLSGLGREGKVKEVMQLLEEMTRTIYPPNLITYNTV 597

Query: 117  INCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLH- 175
            ++C        C       A  +  +M   G  PD+ +Y T++ G  +   L  A R+  
Sbjct: 598  LDCLSKNGEVNC-------AIDMLYSMTEKGCAPDLSSYNTVMYGLIKEERLEEAFRMFC 650

Query: 176  --KKMVSGDY-----------ENGLISKT---------------NIFSYSIIIDSLCKEG 207
              KK+++ DY           +NGL+ +                +  S+  +++ + K+ 
Sbjct: 651  QMKKILAPDYATLCTILPSFVKNGLMKEALHTVKEYILKAGCNVDKSSFHSLMEGILKKA 710

Query: 208  LVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFN 267
             V+K+ E    +  RGI         LI   C      E + LF +   LG      ++N
Sbjct: 711  GVEKSIEFAENIASRGILLNDFFLCPLIRHLCKHKKALEAHQLFNKFKGLGVSLKTGSYN 770

Query: 268  VMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSK 327
             +I  L     I+ A  L   M + G  PD FTYN ++D      R++   ++   MH K
Sbjct: 771  SLIRGLVDENLIDIAEDLFTEMKRLGCGPDEFTYNLILDAMGKSMRVEEMLKVQKEMHRK 830

Query: 328  GCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYA 387
            G + T V+YN +I+G  K   +E+A+ LY  ++S G   T  TY  LL GL ++G+   A
Sbjct: 831  GYESTYVTYNTIISGLVKSKRLEQAIDLYYNLMSEGFSPTPCTYGPLLDGLLKSGKMVDA 890

Query: 388  QKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDG 447
            + LF+EM  Y  EP+ + YNIL++G       +   +LF  +        I+ +  LID 
Sbjct: 891  ENLFNEMLEYGCEPNCTIYNILLNGHRIAGNTENVCQLFEKMVEQGINPDIKSYTILIDT 950

Query: 448  LCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPN 507
            LC AGRL++    F +L + GL P ++ Y+++I GL +  ++E+A      M+K G  PN
Sbjct: 951  LCTAGRLNDGLCYFRQLHELGLEPDLIVYNLLIDGLGKSERIEEAVSLFNEMKKKGIIPN 1010

Query: 508  VVTFNTLM 515
            + T+N+L+
Sbjct: 1011 LYTYNSLI 1018



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 117/459 (25%), Positives = 230/459 (50%), Gaps = 13/459 (2%)

Query: 126 GLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYEN 185
           G+ VE  ++ A      M   G+  +  TY  LI    ++G  + A+ ++K MV    E+
Sbjct: 145 GVGVEGGLRSAPVALPVMREAGMSLNAYTYNGLIYFLVKSGFDAEAMEVYKAMV----ED 200

Query: 186 GLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWE 245
           G+    ++ +YS+++ +  K+  VD    L  EM+ RG+ P V   T  I     A  ++
Sbjct: 201 GI--SPSVRTYSVLMVAFGKKRDVDTVLWLLNEMEARGVKPNVYSYTICIRVLGQAARFD 258

Query: 246 EVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLM 305
           E   +  +M D G +P+++T  V+I  LC  G++++A  +   M      PDR TY +L+
Sbjct: 259 EAYHILGKMEDSGCKPDVVTHTVIIQVLCDAGRLSDAKAVFWKMKASDQKPDRVTYITLL 318

Query: 306 DGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVR 365
           D     G   +  E++ +M + G    +VSY  +++  C++  V+EA++++ ++   G+ 
Sbjct: 319 DKCGDSGDSQSVVEVWNAMVADGYNDNIVSYTAVVDALCQVGRVDEALAVFDEMKEKGMS 378

Query: 366 QTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKL 425
               +YN+L+SG  +A     A +LF+ M      P+  T+ + I+   K+    +A++ 
Sbjct: 379 PEQYSYNSLISGFLKADMFDRALELFNHMNACGPSPNGYTHVLFINYYGKSGQSLKAIQR 438

Query: 426 FHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCR 485
           +  ++       +   N ++  L  +GRL  A  +F++L   G+ P  +TY++MI    +
Sbjct: 439 YEHMKSKGIVPDVAAANAVLYSLAGSGRLGMAKRVFYELKAMGVSPDTITYTMMIKCCSK 498

Query: 486 KGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDD 545
             K ++A +F   M ++GC P+V+  N+L+    +  K ++  +L HK+   E  + P +
Sbjct: 499 ASKADEAMNFFSDMVESGCVPDVLALNSLIDTLYKGGKGNEAWQLFHKLK--EMKIEPTN 556

Query: 546 TTFSIVVDLLAKDEKYHECSAVSKSSYRACLYVTIFQPS 584
            T++ ++  L ++ K  E   + +   R     TI+ P+
Sbjct: 557 GTYNTLLSGLGREGKVKEVMQLLEEMTR-----TIYPPN 590



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 129/479 (26%), Positives = 211/479 (44%), Gaps = 38/479 (7%)

Query: 66   MTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKER 125
            MT    +P +SS+N +   + K    +     + ++  I L PD+ TL  ++  F   + 
Sbjct: 617  MTEKGCAPDLSSYNTVMYGLIKEERLEEAFRMFCQMKKI-LAPDYATLCTILPSF--VKN 673

Query: 126  GLCVENRIKEATWLFKNMI-AFGVRPDVITYGTLINGFCRTGNLSVALRL---------- 174
            GL     +KEA    K  I   G   D  ++ +L+ G  +   +  ++            
Sbjct: 674  GL-----MKEALHTVKEYILKAGCNVDKSSFHSLMEGILKKAGVEKSIEFAENIASRGIL 728

Query: 175  ---------------HKKMVSG----DYENGLISKTNIFSYSIIIDSLCKEGLVDKAKEL 215
                           HKK +      +   GL       SY+ +I  L  E L+D A++L
Sbjct: 729  LNDFFLCPLIRHLCKHKKALEAHQLFNKFKGLGVSLKTGSYNSLIRGLVDENLIDIAEDL 788

Query: 216  FLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCK 275
            F EMK  G  P       ++     +   EE+  +  EM   G     +T+N +I  L K
Sbjct: 789  FTEMKRLGCGPDEFTYNLILDAMGKSMRVEEMLKVQKEMHRKGYESTYVTYNTIISGLVK 848

Query: 276  GGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVS 335
              ++ +A  L   ++  G +P   TY  L+DG    G++  A  +F  M   GC+     
Sbjct: 849  SKRLEQAIDLYYNLMSEGFSPTPCTYGPLLDGLLKSGKMVDAENLFNEMLEYGCEPNCTI 908

Query: 336  YNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMK 395
            YNIL+NG+    N E    L+ +++  G+   + +Y  L+  L  AG+       F ++ 
Sbjct: 909  YNILLNGHRIAGNTENVCQLFEKMVEQGINPDIKSYTILIDTLCTAGRLNDGLCYFRQLH 968

Query: 396  LYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLD 455
               +EPDL  YN+LIDGL K+  ++EAV LF+ ++       +  +N LI  L KAG+  
Sbjct: 969  ELGLEPDLIVYNLLIDGLGKSERIEEAVSLFNEMKKKGIIPNLYTYNSLILHLGKAGKAA 1028

Query: 456  NAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTL 514
             A +++ +L +KG  P+V TY+ +I G    G  + A      M   GC PN  T+  L
Sbjct: 1029 EAAQMYEELLRKGWKPSVFTYNALIRGYSVSGSTDNAYAAYGQMIVGGCQPNSSTYMQL 1087



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 85/350 (24%), Positives = 164/350 (46%), Gaps = 2/350 (0%)

Query: 207 GLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTF 266
           G V    ++F  M+ + +   V    T+  G    G           M + G   N  T+
Sbjct: 115 GRVGDMAQVFDLMQKQVVKTNVGTFATIFGGVGVEGGLRSAPVALPVMREAGMSLNAYTY 174

Query: 267 NVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHS 326
           N +I  L K G   EA  + + M++ G++P   TY+ LM  +     +DT   +   M +
Sbjct: 175 NGLIYFLVKSGFDAEAMEVYKAMVEDGISPSVRTYSVLMVAFGKKRDVDTVLWLLNEMEA 234

Query: 327 KGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGY 386
           +G K  V SY I I    +    +EA  +  ++  +G +  V+T+  ++  L  AG+   
Sbjct: 235 RGVKPNVYSYTICIRVLGQAARFDEAYHILGKMEDSGCKPDVVTHTVIIQVLCDAGRLSD 294

Query: 387 AQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLID 446
           A+ +F +MK  + +PD  TY  L+D    +   Q  V++++ +  + +   I  +  ++D
Sbjct: 295 AKAVFWKMKASDQKPDRVTYITLLDKCGDSGDSQSVVEVWNAMVADGYNDNIVSYTAVVD 354

Query: 447 GLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAP 506
            LC+ GR+D A  +F ++ +KG+ P   +Y+ +I G  +    ++A +   +M   G +P
Sbjct: 355 ALCQVGRVDEALAVFDEMKEKGMSPEQYSYNSLISGFLKADMFDRALELFNHMNACGPSP 414

Query: 507 NVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLA 556
           N  T    ++ + ++ ++ K ++    M    + +VPD    + V+  LA
Sbjct: 415 NGYTHVLFINYYGKSGQSLKAIQRYEHMK--SKGIVPDVAAANAVLYSLA 462



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 84/265 (31%), Positives = 129/265 (48%), Gaps = 13/265 (4%)

Query: 77   SFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEA 136
            ++N +   + K++  +  I  Y  L+S G  P   T   L++       GL    ++ +A
Sbjct: 838  TYNTIISGLVKSKRLEQAIDLYYNLMSEGFSPTPCTYGPLLD-------GLLKSGKMVDA 890

Query: 137  TWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSY 196
              LF  M+ +G  P+   Y  L+NG    GN     +L +KMV    E G+    +I SY
Sbjct: 891  ENLFNEMLEYGCEPNCTIYNILLNGHRIAGNTENVCQLFEKMV----EQGI--NPDIKSY 944

Query: 197  SIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLD 256
            +I+ID+LC  G ++     F ++   G+ P ++V   LI G   +   EE   LF EM  
Sbjct: 945  TILIDTLCTAGRLNDGLCYFRQLHELGLEPDLIVYNLLIDGLGKSERIEEAVSLFNEMKK 1004

Query: 257  LGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDT 316
             G  PNL T+N +I  L K GK  EA  + E ++++G  P  FTYN+L+ GY + G  D 
Sbjct: 1005 KGIIPNLYTYNSLILHLGKAGKAAEAAQMYEELLRKGWKPSVFTYNALIRGYSVSGSTDN 1064

Query: 317  AREIFLSMHSKGCKHTVVSYNILIN 341
            A   +  M   GC+    +Y  L N
Sbjct: 1065 AYAAYGQMIVGGCQPNSSTYMQLPN 1089



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 56/219 (25%), Positives = 94/219 (42%), Gaps = 30/219 (13%)

Query: 21   LSSLFKSPRQIAAVSSPETQLNEFLHENCKSGI----INLNEAR---------YFFGYMT 67
            L  L KS + + A    E   NE L   C+       I LN  R           F  M 
Sbjct: 878  LDGLLKSGKMVDA----ENLFNEMLEYGCEPNCTIYNILLNGHRIAGNTENVCQLFEKMV 933

Query: 68   HMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGL 127
                +P I S+ +L   +      +  + ++R+L  +GL PD +  N+LI+  G  E   
Sbjct: 934  EQGINPDIKSYTILIDTLCTAGRLNDGLCYFRQLHELGLEPDLIVYNLLIDGLGKSE--- 990

Query: 128  CVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGL 187
                RI+EA  LF  M   G+ P++ TY +LI    + G  + A +++++++   +    
Sbjct: 991  ----RIEEAVSLFNEMKKKGIIPNLYTYNSLILHLGKAGKAAEAAQMYEELLRKGW---- 1042

Query: 188  ISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINP 226
              K ++F+Y+ +I      G  D A   + +M   G  P
Sbjct: 1043 --KPSVFTYNALIRGYSVSGSTDNAYAAYGQMIVGGCQP 1079


>gi|224030417|gb|ACN34284.1| unknown [Zea mays]
 gi|413950072|gb|AFW82721.1| hypothetical protein ZEAMMB73_503137 [Zea mays]
          Length = 647

 Score =  201 bits (512), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 126/465 (27%), Positives = 218/465 (46%), Gaps = 19/465 (4%)

Query: 70  QPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCV 129
           +P+ P   +N L  A+ +     AV+  Y  +   G+ P+  T N+L+       R LC 
Sbjct: 124 RPTEP-RLYNHLIDALLRENMVGAVVLVYDNMRKDGVHPNVFTYNLLV-------RALCQ 175

Query: 130 ENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLIS 189
            NR+  A  +   M   G  PD +TY T+++  C+   L  A  +   M           
Sbjct: 176 NNRVGAARKMLDEMARKGCPPDDVTYATIVSVLCKLDRLDEATEVLAAM----------- 224

Query: 190 KTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNG 249
                SY+ I+ +LC+E  + +   +  +M GRG+ P V+  TT++  FC AG       
Sbjct: 225 PPVAASYNAIVLALCREFRMQEVFSVVSDMVGRGLQPNVITYTTIVDAFCKAGELRMACA 284

Query: 250 LFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYC 309
           +   M+  G  PN++TF  ++  L   G++++A  +   M+  G  P   +YN L+ G C
Sbjct: 285 ILARMVITGCTPNVVTFTALVRGLFDDGRVHDALDMWRWMVAEGWAPSTVSYNILIRGLC 344

Query: 310 LVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVI 369
            VG +  A  I  SM   GC   V +Y+ LI+G+ K  ++  A+S++  +  +G +  V+
Sbjct: 345 SVGDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVV 404

Query: 370 TYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHML 429
            Y  ++    +      A+ L D+M L N  P+  T+N LI  LC    V  A+ +FH +
Sbjct: 405 VYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEM 464

Query: 430 EMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKL 489
             +        +N LI GL + G   +A  +  ++   G+  ++VTY+ ++ GLC+    
Sbjct: 465 RRHGCVPNGRTYNELIHGLFREGNCGDALHMVTEMQSHGIELSLVTYNTVVSGLCQTRMS 524

Query: 490 EKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKM 534
            +A  F+  M   G  PN  TF+ ++H + +  +      +L  M
Sbjct: 525 REAMVFVGKMIVQGIQPNAFTFSAIIHAYCKEGEVRMAAWMLGAM 569



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 99/400 (24%), Positives = 184/400 (46%), Gaps = 10/400 (2%)

Query: 159 INGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLE 218
           +  F R G    AL+   + V   ++ G    T    Y+ +ID+L +E +V     ++  
Sbjct: 97  VGAFARAGAPDRALKTFYRAV---HDLGCARPTEPRLYNHLIDALLRENMVGAVVLVYDN 153

Query: 219 MKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGK 278
           M+  G++P V     L+   C          +  EM   G  P+ +T+  ++  LCK  +
Sbjct: 154 MRKDGVHPNVFTYNLLVRALCQNNRVGAARKMLDEMARKGCPPDDVTYATIVSVLCKLDR 213

Query: 279 INEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNI 338
           ++EA  +L  M      P   +YN+++   C   R+     +   M  +G +  V++Y  
Sbjct: 214 LDEATEVLAAM-----PPVAASYNAIVLALCREFRMQEVFSVVSDMVGRGLQPNVITYTT 268

Query: 339 LINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYN 398
           +++ +CK   +  A ++  +++  G    V+T+  L+ GLF  G+   A  ++  M    
Sbjct: 269 IVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGRVHDALDMWRWMVAEG 328

Query: 399 VEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAW 458
             P   +YNILI GLC    ++ A  + + +E +     +  ++ LIDG  KAG L  A 
Sbjct: 329 WAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAI 388

Query: 459 ELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGF 518
            +++ + + G  P VV Y+ M+   C+K    +A   +  M    C PN VTFNTL+   
Sbjct: 389 SIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSL 448

Query: 519 LQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKD 558
               +  + + + H+M       VP+  T++ ++  L ++
Sbjct: 449 CDCRRVGRALGVFHEMR--RHGCVPNGRTYNELIHGLFRE 486



 Score =  121 bits (304), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 103/389 (26%), Positives = 172/389 (44%), Gaps = 19/389 (4%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFN-LLFGAVAKNRHYDAVISFYRKLVSIGLL 107
           CK+G   L  A      M     +P + +F  L+ G     R +DA +  +R +V+ G  
Sbjct: 274 CKAG--ELRMACAILARMVITGCTPNVVTFTALVRGLFDDGRVHDA-LDMWRWMVAEGWA 330

Query: 108 PDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGN 167
           P  ++ NILI       RGLC    +K A+ +  +M   G  P+V TY TLI+GF + G+
Sbjct: 331 PSTVSYNILI-------RGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGD 383

Query: 168 LSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPA 227
           L  A+ +   M           K N+  Y+ ++D  CK+ + ++AK L  +M      P 
Sbjct: 384 LGGAISIWNDMSRSG------CKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPN 437

Query: 228 VVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLE 287
            V   TLI   C         G+F EM   G  PN  T+N +I  L + G   +A  ++ 
Sbjct: 438 TVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGDALHMVT 497

Query: 288 LMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLS-MHSKGCKHTVVSYNILINGYCKI 346
            M   G+     TYN+++ G C   R+     +F+  M  +G +    +++ +I+ YCK 
Sbjct: 498 EMQSHGIELSLVTYNTVVSGLCQT-RMSREAMVFVGKMIVQGIQPNAFTFSAIIHAYCKE 556

Query: 347 LNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTY 406
             V  A  +   +      + ++ Y  L++ L    +   A     +M    + P+  T+
Sbjct: 557 GEVRMAAWMLGAMNVVNCHRNILVYTILMAELCNQDKLVDAMTYLLKMLYEGIYPNTVTW 616

Query: 407 NILIDGLCKNNCVQEAVKLFHMLEMNKFE 435
           N+L+ G+ +N    E       + MN  E
Sbjct: 617 NVLVRGVFRNLGCIEPSDFIQHITMNLSE 645



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 41/208 (19%), Positives = 83/208 (39%), Gaps = 10/208 (4%)

Query: 363 GVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEA 422
           G       +   +  L  AG     Q    EM+L  V          +    +      A
Sbjct: 50  GTGDAARAHEAAVRRLAAAGDVDGVQLALQEMRLRGVPCTEGALVAAVGAFARAGAPDRA 109

Query: 423 VKLFHMLEMN---KFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIM 479
           +K F+    +          ++N LID L +   +     ++  + + G+ P V TY+++
Sbjct: 110 LKTFYRAVHDLGCARPTEPRLYNHLIDALLRENMVGAVVLVYDNMRKDGVHPNVFTYNLL 169

Query: 480 IHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPER 539
           +  LC+  ++  A   L  M + GC P+ VT+ T++    + ++  +  E+L  M     
Sbjct: 170 VRALCQNNRVGAARKMLDEMARKGCPPDDVTYATIVSVLCKLDRLDEATEVLAAMP---- 225

Query: 540 NLVPDDTTFSIVVDLLAKDEKYHECSAV 567
              P   +++ +V  L ++ +  E  +V
Sbjct: 226 ---PVAASYNAIVLALCREFRMQEVFSV 250


>gi|242058007|ref|XP_002458149.1| hypothetical protein SORBIDRAFT_03g027690 [Sorghum bicolor]
 gi|241930124|gb|EES03269.1| hypothetical protein SORBIDRAFT_03g027690 [Sorghum bicolor]
          Length = 795

 Score =  201 bits (512), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 131/479 (27%), Positives = 232/479 (48%), Gaps = 16/479 (3%)

Query: 72  SPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVEN 131
           +P   ++ +L          D      R+++  GLLP     N++I       +GL    
Sbjct: 326 TPTNVTYTVLIKGCDAEGMTDETYKLCRQMIEQGLLPSTYEFNLVI-------KGLLRNK 378

Query: 132 RIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKT 191
           + ++A  LF  ++  GV PDV TYG LI+   +   +  A+ L  KM     E G+  K 
Sbjct: 379 QWEDAIALFDLVVDTGV-PDVFTYGCLIHWLSKHHKVHEAVNLWDKM----KEAGV--KP 431

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
           +I +   ++   C++G +D+A +L+ EM G+G  P  V  TTL+ G+     +++   L 
Sbjct: 432 SIVTCHSLLLGYCEKGCMDEALKLYSEMPGKGFPPNEVTYTTLMKGYIKKKAFDKAYALL 491

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
            EM   G      T+N++I+ LC   ++ E + +L+  +  G  P   TYNS+++G+   
Sbjct: 492 NEMHQNGVSCGEYTYNILINGLCMVDRVCEVDEMLKRFVSEGFVPTTMTYNSIINGFVKA 551

Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
           G + +A  ++  M  KG    +V+Y   I+GYC+    + A+ L   +  NG+   +  Y
Sbjct: 552 GMMGSALAMYRQMCEKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYMRCNGIHPDIAAY 611

Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
           N  ++   + G   +A      +    + P+++ YN  + G      + EA K ++ +  
Sbjct: 612 NAFINMFCKQGNMSHALHFLVLLLKDGLTPNVTVYNSFVTGYKNLKMMAEASKFYYSMIK 671

Query: 432 NKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEK 491
            +     EI+  LIDG  K G +  A EL+ ++     +P   T++ + HGLCR G ++ 
Sbjct: 672 QRIAADTEIYTTLIDGFSKVGNVAFALELYSEMLANHNIPDDKTFTALTHGLCRSGDIDG 731

Query: 492 ANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSI 550
           A   L  M +    PN VT+N L++  +++ K  +  +L  KM      +VPDDTT++I
Sbjct: 732 AKRLLDDMTRLDVCPNTVTYNMLINAHIRDGKLQEAFQLHDKML--SSGVVPDDTTYNI 788



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 122/454 (26%), Positives = 212/454 (46%), Gaps = 13/454 (2%)

Query: 78  FNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEAT 137
           ++++  A    R +   +  + ++   G+ PD     I I        GLC       A 
Sbjct: 191 YDVVMRACVVGRMHGDAVRLFDEMAGAGVKPDERVYAITIT-------GLCKLRDADRAV 243

Query: 138 WLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYS 197
            +   M   G++P   TY ++++   + G +  ALRL  +M+    +     K ++F  +
Sbjct: 244 QVLGKMREAGLKPRDFTYNSVVDVLVKVGRMDEALRLKDQMLLATGK-----KMDVFLAT 298

Query: 198 IIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDL 257
            ++   C  G + KA +LF E    G+ P  V  T LI G    G  +E   L  +M++ 
Sbjct: 299 TLMQGYCLHGEIGKALDLFDEAVRDGVTPTNVTYTVLIKGCDAEGMTDETYKLCRQMIEQ 358

Query: 258 GPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTA 317
           G  P+   FN++I  L +  +  +A  L +L++  G+ PD FTY  L+       ++  A
Sbjct: 359 GLLPSTYEFNLVIKGLLRNKQWEDAIALFDLVVDTGV-PDVFTYGCLIHWLSKHHKVHEA 417

Query: 318 REIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSG 377
             ++  M   G K ++V+ + L+ GYC+   ++EA+ LY ++   G     +TY TL+ G
Sbjct: 418 VNLWDKMKEAGVKPSIVTCHSLLLGYCEKGCMDEALKLYSEMPGKGFPPNEVTYTTLMKG 477

Query: 378 LFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFG 437
             +      A  L +EM    V     TYNILI+GLC  + V E  ++        F   
Sbjct: 478 YIKKKAFDKAYALLNEMHQNGVSCGEYTYNILINGLCMVDRVCEVDEMLKRFVSEGFVPT 537

Query: 438 IEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLL 497
              +N +I+G  KAG + +A  ++ ++ +KG+ P +VTY+  I G CR    + A   L+
Sbjct: 538 TMTYNSIINGFVKAGMMGSALAMYRQMCEKGITPNIVTYTSFIDGYCRTNCCDLAVKLLI 597

Query: 498 YMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELL 531
           YM  NG  P++  +N  ++ F +    S  +  L
Sbjct: 598 YMRCNGIHPDIAAYNAFINMFCKQGNMSHALHFL 631



 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 120/420 (28%), Positives = 200/420 (47%), Gaps = 12/420 (2%)

Query: 140 FKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKM-VSGDYENGLISKTNIFSYSI 198
           +  M+  GV PD  +   L+    R  + + AL L  +M   G Y +  +       Y +
Sbjct: 141 YSRMVTRGVVPDAKSRTDLLVATARGASAADALTLFDEMRCKGYYADAKM-------YDV 193

Query: 199 IIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLG 258
           ++ +     +   A  LF EM G G+ P   V    I G C   + +    +  +M + G
Sbjct: 194 VMRACVVGRMHGDAVRLFDEMAGAGVKPDERVYAITITGLCKLRDADRAVQVLGKMREAG 253

Query: 259 PRPNLLTFNVMIDCLCKGGKINEANGLL-ELMIQRGLNPDRFTYNSLMDGYCLVGRIDTA 317
            +P   T+N ++D L K G+++EA  L  ++++  G   D F   +LM GYCL G I  A
Sbjct: 254 LKPRDFTYNSVVDVLVKVGRMDEALRLKDQMLLATGKKMDVFLATTLMQGYCLHGEIGKA 313

Query: 318 REIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSG 377
            ++F      G   T V+Y +LI G       +E   L RQ+I  G+  +   +N ++ G
Sbjct: 314 LDLFDEAVRDGVTPTNVTYTVLIKGCDAEGMTDETYKLCRQMIEQGLLPSTYEFNLVIKG 373

Query: 378 LFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFG 437
           L +  Q   A  LFD +    V PD+ TY  LI  L K++ V EAV L+  ++    +  
Sbjct: 374 LLRNKQWEDAIALFDLVVDTGV-PDVFTYGCLIHWLSKHHKVHEAVNLWDKMKEAGVKPS 432

Query: 438 IEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLL 497
           I   + L+ G C+ G +D A +L+ ++P KG  P  VTY+ ++ G  +K   +KA   L 
Sbjct: 433 IVTCHSLLLGYCEKGCMDEALKLYSEMPGKGFPPNEVTYTTLMKGYIKKKAFDKAYALLN 492

Query: 498 YMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAK 557
            M +NG +    T+N L++G    ++  +V E+L +        VP   T++ +++   K
Sbjct: 493 EMHQNGVSCGEYTYNILINGLCMVDRVCEVDEMLKRFV--SEGFVPTTMTYNSIINGFVK 550



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 60/248 (24%), Positives = 102/248 (41%), Gaps = 38/248 (15%)

Query: 356 YRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEM---------KLYN-------- 398
           Y ++++ GV     +   LL    +   A  A  LFDEM         K+Y+        
Sbjct: 141 YSRMVTRGVVPDAKSRTDLLVATARGASAADALTLFDEMRCKGYYADAKMYDVVMRACVV 200

Query: 399 ------------------VEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEI 440
                             V+PD   Y I I GLCK      AV++   +     +     
Sbjct: 201 GRMHGDAVRLFDEMAGAGVKPDERVYAITITGLCKLRDADRAVQVLGKMREAGLKPRDFT 260

Query: 441 FNCLIDGLCKAGRLDNAWELFHK-LPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYM 499
           +N ++D L K GR+D A  L  + L   G    V   + ++ G C  G++ KA D     
Sbjct: 261 YNSVVDVLVKVGRMDEALRLKDQMLLATGKKMDVFLATTLMQGYCLHGEIGKALDLFDEA 320

Query: 500 EKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDE 559
            ++G  P  VT+  L+ G      T +  +L  +M   E+ L+P    F++V+  L +++
Sbjct: 321 VRDGVTPTNVTYTVLIKGCDAEGMTDETYKLCRQMI--EQGLLPSTYEFNLVIKGLLRNK 378

Query: 560 KYHECSAV 567
           ++ +  A+
Sbjct: 379 QWEDAIAL 386


>gi|125542535|gb|EAY88674.1| hypothetical protein OsI_10149 [Oryza sativa Indica Group]
          Length = 333

 Score =  201 bits (512), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 112/332 (33%), Positives = 186/332 (56%), Gaps = 6/332 (1%)

Query: 140 FKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSII 199
            + M  FG+ PD + Y  +I GFCR G +S ALR+  +MV      G     ++ +Y+ +
Sbjct: 4   LREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMV------GCGCLPDVVTYNTL 57

Query: 200 IDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGP 259
           ++ LCKE  +  A+ L  EM+ RG+ P +   TTLIHG+C  G  ++   LF  ML+   
Sbjct: 58  LNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRL 117

Query: 260 RPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTARE 319
           RP+++T+N +ID +C+ G +++AN L + M  R + P+  TY+ L+D +C  G+++ A  
Sbjct: 118 RPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFG 177

Query: 320 IFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLF 379
               M +KG    +++YN +I GYC+  NV +     ++++ N V   +ITYNTL+ G  
Sbjct: 178 FLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYI 237

Query: 380 QAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIE 439
           +  +   A KL + M+   V+PD+ TYN+LI+G   +  VQEA  +F  +     E    
Sbjct: 238 KEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRY 297

Query: 440 IFNCLIDGLCKAGRLDNAWELFHKLPQKGLVP 471
            +  +I+G   AG    A++L  ++ Q+G  P
Sbjct: 298 TYMSMINGHVTAGNSKEAFQLHDEMLQRGFAP 329



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 107/312 (34%), Positives = 169/312 (54%)

Query: 196 YSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEML 255
           Y+++I   C+ GL+  A  +  EM G G  P VV   TL++G C      +  GL  EM 
Sbjct: 19  YTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMR 78

Query: 256 DLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRID 315
           + G  P+L TF  +I   C  GK+++A  L + M+ + L PD  TYN+L+DG C  G +D
Sbjct: 79  ERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLD 138

Query: 316 TAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLL 375
            A +++  MHS+      V+Y+ILI+ +C+   VE+A     ++I+ G+   ++TYN+++
Sbjct: 139 KANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSII 198

Query: 376 SGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFE 435
            G  ++G     QK   +M +  V PDL TYN LI G  K + + +A KL +M+E  K +
Sbjct: 199 KGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQ 258

Query: 436 FGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDF 495
             +  +N LI+G    G +  A  +F K+  KG+ P   TY  MI+G    G  ++A   
Sbjct: 259 PDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQL 318

Query: 496 LLYMEKNGCAPN 507
              M + G AP+
Sbjct: 319 HDEMLQRGFAPD 330



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 102/325 (31%), Positives = 172/325 (52%), Gaps = 13/325 (4%)

Query: 78  FNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEAT 137
           + ++ G   +       +    ++V  G LPD +T N L+N       GLC E R+ +A 
Sbjct: 19  YTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLN-------GLCKERRLLDAE 71

Query: 138 WLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYS 197
            L   M   GV PD+ T+ TLI+G+C  G L  AL+L   M++         + +I +Y+
Sbjct: 72  GLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRL------RPDIVTYN 125

Query: 198 IIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDL 257
            +ID +C++G +DKA +L+ +M  R I P  V  + LI   C  G  E+  G   EM++ 
Sbjct: 126 TLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINK 185

Query: 258 GPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTA 317
           G  PN++T+N +I   C+ G +++    L+ M+   ++PD  TYN+L+ GY    ++  A
Sbjct: 186 GILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDA 245

Query: 318 REIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSG 377
            ++   M  +  +  VV+YN+LING+    NV+EA  ++ ++ + G+     TY ++++G
Sbjct: 246 FKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMING 305

Query: 378 LFQAGQAGYAQKLFDEMKLYNVEPD 402
              AG +  A +L DEM      PD
Sbjct: 306 HVTAGNSKEAFQLHDEMLQRGFAPD 330



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 97/328 (29%), Positives = 183/328 (55%), Gaps = 2/328 (0%)

Query: 218 EMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGG 277
           EM+  G+ P  V+ T +I GFC AG   +   +  EM+  G  P+++T+N +++ LCK  
Sbjct: 6   EMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKER 65

Query: 278 KINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYN 337
           ++ +A GLL  M +RG+ PD  T+ +L+ GYC+ G++D A ++F +M ++  +  +V+YN
Sbjct: 66  RLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYN 125

Query: 338 ILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLY 397
            LI+G C+  ++++A  L+  + S  +    +TY+ L+    + GQ   A    DEM   
Sbjct: 126 TLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINK 185

Query: 398 NVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNA 457
            + P++ TYN +I G C++  V +  K    + +NK    +  +N LI G  K  ++ +A
Sbjct: 186 GILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDA 245

Query: 458 WELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHG 517
           ++L + + ++ + P VVTY+++I+G    G +++A      M   G  P+  T+ ++++G
Sbjct: 246 FKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMING 305

Query: 518 FLQNNKTSKVVELLHKMAEPERNLVPDD 545
            +    + +  +L  +M   +R   PDD
Sbjct: 306 HVTAGNSKEAFQLHDEML--QRGFAPDD 331



 Score =  168 bits (426), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 101/331 (30%), Positives = 172/331 (51%), Gaps = 13/331 (3%)

Query: 95  ISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVIT 154
           +++ R++   GL+PD +   ++I        G C    + +A  +   M+  G  PDV+T
Sbjct: 1   MAYLREMRCFGLVPDGVIYTMVIG-------GFCRAGLMSDALRVRDEMVGCGCLPDVVT 53

Query: 155 YGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKE 214
           Y TL+NG C+   L  A  L  +M     E G+    ++ +++ +I   C EG +DKA +
Sbjct: 54  YNTLLNGLCKERRLLDAEGLLNEM----RERGV--PPDLCTFTTLIHGYCIEGKLDKALQ 107

Query: 215 LFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLC 274
           LF  M  + + P +V   TLI G C  G+ ++ N L+ +M      PN +T++++ID  C
Sbjct: 108 LFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHC 167

Query: 275 KGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVV 334
           + G++ +A G L+ MI +G+ P+  TYNS++ GYC  G +   ++    M        ++
Sbjct: 168 EKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLI 227

Query: 335 SYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEM 394
           +YN LI+GY K   + +A  L   +    V+  V+TYN L++G    G    A  +F++M
Sbjct: 228 TYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKM 287

Query: 395 KLYNVEPDLSTYNILIDGLCKNNCVQEAVKL 425
               +EPD  TY  +I+G       +EA +L
Sbjct: 288 CAKGIEPDRYTYMSMINGHVTAGNSKEAFQL 318



 Score =  105 bits (262), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 69/246 (28%), Positives = 118/246 (47%), Gaps = 37/246 (15%)

Query: 353 MSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDG 412
           M+  R++   G+    + Y  ++ G  +AG    A ++ DEM      PD+ TYN L++G
Sbjct: 1   MAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNG 60

Query: 413 LCKNN-------------------------------CVQ----EAVKLFHMLEMNKFEFG 437
           LCK                                 C++    +A++LF  +   +    
Sbjct: 61  LCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPD 120

Query: 438 IEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLL 497
           I  +N LIDG+C+ G LD A +L+  +  + + P  VTYSI+I   C KG++E A  FL 
Sbjct: 121 IVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLD 180

Query: 498 YMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAK 557
            M   G  PN++T+N+++ G+ ++   SK  + L KM      + PD  T++ ++    K
Sbjct: 181 EMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMM--VNKVSPDLITYNTLIHGYIK 238

Query: 558 DEKYHE 563
           ++K H+
Sbjct: 239 EDKMHD 244



 Score = 72.4 bits (176), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 43/140 (30%), Positives = 73/140 (52%), Gaps = 11/140 (7%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFN-LLFGAVAKNRHYDAVISFYRK 100
           N  +   C+SG  N+++ + F   M   + SP + ++N L+ G + +++ +DA       
Sbjct: 195 NSIIKGYCRSG--NVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDA-FKLLNM 251

Query: 101 LVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLIN 160
           +    + PD +T N+LIN       G  V   ++EA W+F+ M A G+ PD  TY ++IN
Sbjct: 252 MEKEKVQPDVVTYNMLIN-------GFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMIN 304

Query: 161 GFCRTGNLSVALRLHKKMVS 180
           G    GN   A +LH +M+ 
Sbjct: 305 GHVTAGNSKEAFQLHDEMLQ 324


>gi|297816792|ref|XP_002876279.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297322117|gb|EFH52538.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 850

 Score =  201 bits (512), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 152/547 (27%), Positives = 257/547 (46%), Gaps = 46/547 (8%)

Query: 9   CLFSSETVSKVKLSSL----------FKSPRQIAAVSSPETQLNEFLHENCKSGIINLNE 58
           C+ S ET + V L+S+          +K       +S         +  +CK+   +L  
Sbjct: 299 CVPSQETYTSVILASVKQGNMEDAIRWKDEMVSDGISMNVVAATSLITGHCKNN--DLGS 356

Query: 59  ARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILIN 118
           A   F  M +  PSP   +F++L    +KN   +  + FY+K+ S+GL P    ++ +I 
Sbjct: 357 ALDLFYKMENEGPSPNSVTFSVLIERFSKNGEMEKALEFYKKMESLGLTPSVFHVHTIIQ 416

Query: 119 CF--GNK------------ERGL-------------CVENRIKEATWLFKNMIAFGVRPD 151
            +  G K            E GL             C + +I +AT L + M + G+ P+
Sbjct: 417 GWLKGQKHEEALKLFDESFETGLANVFICNTILSWLCKQGKIDKATELLRKMESRGIGPN 476

Query: 152 VITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDK 211
           V++Y  ++   CR  N+ +A  +   M+    E GL  K N ++YSI+ID   K      
Sbjct: 477 VVSYNNVMLAHCRKKNMDLARTVFSNML----EKGL--KPNNYTYSILIDGCFKNHDEQN 530

Query: 212 AKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPR-PNLLTFNVMI 270
             E+  +M    I    VV  T+I+G C  G   +   L   M++      + +++N +I
Sbjct: 531 VLEVVNQMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRFCVSCMSYNSII 590

Query: 271 DCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCK 330
           D   K G+++ A    E M   G++P+  TY SLMDG C   R+D A E+   M +KG K
Sbjct: 591 DGFIKEGEMDYAVAAYEEMCANGISPNVITYTSLMDGLCKNNRMDQALEMRDEMKNKGVK 650

Query: 331 HTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKL 390
             + +Y  LI+G+CK  N+E A +L+ +++  G+  +   YN+L+SG    G    A  L
Sbjct: 651 LDIPAYGALIHGFCKKSNMESASALFSELLEEGLNPSQPVYNSLISGFRNLGNMVAALDL 710

Query: 391 FDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCK 450
           + +M    +  DL TY  LIDGL K   +  A  L+  ++         ++  +++GL K
Sbjct: 711 YKKMLKDGLRCDLGTYTTLIDGLLKEGNLILASDLYTEMQAVGLVPDEIMYTVIVNGLSK 770

Query: 451 AGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVT 510
            G+     ++F ++ +  + P V+ Y+ +I G  R+G L++A      M   G  P+  T
Sbjct: 771 KGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGAT 830

Query: 511 FNTLMHG 517
           F+ L+ G
Sbjct: 831 FDILVSG 837



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 141/518 (27%), Positives = 242/518 (46%), Gaps = 54/518 (10%)

Query: 87  KNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAF 146
           KN    + +  + K+ + G  P+ +T ++LI  F            +++A   +K M + 
Sbjct: 350 KNNDLGSALDLFYKMENEGPSPNSVTFSVLIERFSKN-------GEMEKALEFYKKMESL 402

Query: 147 GVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKE 206
           G+ P V    T+I G+ +      AL+L  +     +E GL    N+F  + I+  LCK+
Sbjct: 403 GLTPSVFHVHTIIQGWLKGQKHEEALKLFDE----SFETGL---ANVFICNTILSWLCKQ 455

Query: 207 GLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTF 266
           G +DKA EL  +M+ RGI P VV    ++   C   N +    +F  ML+ G +PN  T+
Sbjct: 456 GKIDKATELLRKMESRGIGPNVVSYNNVMLAHCRKKNMDLARTVFSNMLEKGLKPNNYTY 515

Query: 267 NVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSM-H 325
           +++ID   K         ++  M    +  +   Y ++++G C VG+   ARE+  +M  
Sbjct: 516 SILIDGCFKNHDEQNVLEVVNQMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIE 575

Query: 326 SKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAG 385
            K    + +SYN +I+G+ K   ++ A++ Y ++ +NG+   VITY +L+ GL +  +  
Sbjct: 576 EKRFCVSCMSYNSIIDGFIKEGEMDYAVAAYEEMCANGISPNVITYTSLMDGLCKNNRMD 635

Query: 386 YAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLI 445
            A ++ DEMK   V+ D+  Y  LI G CK + ++ A  LF  L          ++N LI
Sbjct: 636 QALEMRDEMKNKGVKLDIPAYGALIHGFCKKSNMESASALFSELLEEGLNPSQPVYNSLI 695

Query: 446 -----------------------------------DGLCKAGRLDNAWELFHKLPQKGLV 470
                                              DGL K G L  A +L+ ++   GLV
Sbjct: 696 SGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKEGNLILASDLYTEMQAVGLV 755

Query: 471 PTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVEL 530
           P  + Y+++++GL +KG+  K       M+KN   PNV+ +N ++ G  +     +   L
Sbjct: 756 PDEIMYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRL 815

Query: 531 LHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVS 568
             +M   ++ ++PD  TF I+V    K  K+    A S
Sbjct: 816 HDEML--DKGILPDGATFDILVS--GKVGKFQPIRAAS 849



 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 132/547 (24%), Positives = 244/547 (44%), Gaps = 74/547 (13%)

Query: 53  IINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLT 112
           + NL ++   FG+  + +      +FN L  A +K+R  D  +    +++ +G++P    
Sbjct: 146 VSNLVDSAKLFGFEVNSR------AFNYLLNAYSKDRQTDYAVDIVNQMLELGVIPFVPY 199

Query: 113 LNILINCFGNKE----------------------------RGLCVENRIKEATWLFKNMI 144
           +N  ++    +                             R    E +  EA  +F   I
Sbjct: 200 VNRTLSALVQRNSITEAKELYSRMVAIGVDGDNGTTQLLMRASLREEKPAEALEVFSRAI 259

Query: 145 AFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLC 204
             G  PD + Y   +   C+T NL++A  L ++M     E  L   +     S+I+ S+ 
Sbjct: 260 ERGAEPDSLLYSLAVQACCKTLNLAMANSLLREM----KEKKLCVPSQETYTSVILASV- 314

Query: 205 KEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLL 264
           K+G ++ A     EM   GI+  VV  T+LI G C   +      LF +M + GP PN +
Sbjct: 315 KQGNMEDAIRWKDEMVSDGISMNVVAATSLITGHCKNNDLGSALDLFYKMENEGPSPNSV 374

Query: 265 TFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGY---------------- 308
           TF+V+I+   K G++ +A    + M   GL P  F  ++++ G+                
Sbjct: 375 TFSVLIERFSKNGEMEKALEFYKKMESLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDES 434

Query: 309 ------------------CLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVE 350
                             C  G+ID A E+   M S+G    VVSYN ++  +C+  N++
Sbjct: 435 FETGLANVFICNTILSWLCKQGKIDKATELLRKMESRGIGPNVVSYNNVMLAHCRKKNMD 494

Query: 351 EAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILI 410
            A +++  ++  G++    TY+ L+ G F+        ++ ++M   N+E +   Y  +I
Sbjct: 495 LARTVFSNMLEKGLKPNNYTYSILIDGCFKNHDEQNVLEVVNQMTSSNIEVNGVVYQTII 554

Query: 411 DGLCKNNCVQEAVKLF-HMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGL 469
           +GLCK     +A +L  +M+E  +F      +N +IDG  K G +D A   + ++   G+
Sbjct: 555 NGLCKVGQTSKARELLANMIEEKRFCVSCMSYNSIIDGFIKEGEMDYAVAAYEEMCANGI 614

Query: 470 VPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVE 529
            P V+TY+ ++ GLC+  ++++A +    M+  G   ++  +  L+HGF + +       
Sbjct: 615 SPNVITYTSLMDGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIHGFCKKSNMESASA 674

Query: 530 LLHKMAE 536
           L  ++ E
Sbjct: 675 LFSELLE 681



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 102/458 (22%), Positives = 201/458 (43%), Gaps = 21/458 (4%)

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVI-----TYGTLINGFC 163
           D   +++L+N   N E  L   N  +     F++   F V   ++     TYG   +   
Sbjct: 71  DASVIDVLLNRRNNPEAALRFYNWARPWRGSFEDGDVFWVLIHILVTSPETYGRASDLLI 130

Query: 164 RTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSI-------IIDSLCKEGLVDKAKELF 216
           R  + S    +   +VS      L+    +F + +       ++++  K+   D A ++ 
Sbjct: 131 RYVSTSNPTPMASVLVSN-----LVDSAKLFGFEVNSRAFNYLLNAYSKDRQTDYAVDIV 185

Query: 217 LEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKG 276
            +M   G+ P V      +       +  E   L+  M+ +G   +  T  +++    + 
Sbjct: 186 NQMLELGVIPFVPYVNRTLSALVQRNSITEAKELYSRMVAIGVDGDNGTTQLLMRASLRE 245

Query: 277 GKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKG-CKHTVVS 335
            K  EA  +    I+RG  PD   Y+  +   C    +  A  +   M  K  C  +  +
Sbjct: 246 EKPAEALEVFSRAIERGAEPDSLLYSLAVQACCKTLNLAMANSLLREMKEKKLCVPSQET 305

Query: 336 YNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMK 395
           Y  +I    K  N+E+A+    +++S+G+   V+   +L++G  +    G A  LF +M+
Sbjct: 306 YTSVILASVKQGNMEDAIRWKDEMVSDGISMNVVAATSLITGHCKNNDLGSALDLFYKME 365

Query: 396 LYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLD 455
                P+  T+++LI+   KN  +++A++ +  +E       +   + +I G  K  + +
Sbjct: 366 NEGPSPNSVTFSVLIERFSKNGEMEKALEFYKKMESLGLTPSVFHVHTIIQGWLKGQKHE 425

Query: 456 NAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLM 515
            A +LF +  + GL    +  +I+   LC++GK++KA + L  ME  G  PNVV++N +M
Sbjct: 426 EALKLFDESFETGLANVFICNTIL-SWLCKQGKIDKATELLRKMESRGIGPNVVSYNNVM 484

Query: 516 HGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
               +         +   M   E+ L P++ T+SI++D
Sbjct: 485 LAHCRKKNMDLARTVFSNML--EKGLKPNNYTYSILID 520



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 61/246 (24%), Positives = 114/246 (46%), Gaps = 10/246 (4%)

Query: 314 IDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNT 373
           +D+A+     ++S+       ++N L+N Y K    + A+ +  Q++  GV   V   N 
Sbjct: 150 VDSAKLFGFEVNSR-------AFNYLLNAYSKDRQTDYAVDIVNQMLELGVIPFVPYVNR 202

Query: 374 LLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNK 433
            LS L Q      A++L+  M    V+ D  T  +L+    +     EA+++F       
Sbjct: 203 TLSALVQRNSITEAKELYSRMVAIGVDGDNGTTQLLMRASLREEKPAEALEVFSRAIERG 262

Query: 434 FEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGL-VPTVVTYSIMIHGLCRKGKLEKA 492
            E    +++  +   CK   L  A  L  ++ +K L VP+  TY+ +I    ++G +E A
Sbjct: 263 AEPDSLLYSLAVQACCKTLNLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMEDA 322

Query: 493 NDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVV 552
             +   M  +G + NVV   +L+ G  +NN     ++L +KM        P+  TFS+++
Sbjct: 323 IRWKDEMVSDGISMNVVAATSLITGHCKNNDLGSALDLFYKME--NEGPSPNSVTFSVLI 380

Query: 553 DLLAKD 558
           +  +K+
Sbjct: 381 ERFSKN 386



 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 66/285 (23%), Positives = 115/285 (40%), Gaps = 3/285 (1%)

Query: 293 GLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEA 352
           G   +   +N L++ Y    + D A +I   M   G    V   N  ++   +  ++ EA
Sbjct: 157 GFEVNSRAFNYLLNAYSKDRQTDYAVDIVNQMLELGVIPFVPYVNRTLSALVQRNSITEA 216

Query: 353 MSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDG 412
             LY ++++ GV     T   L+    +  +   A ++F        EPD   Y++ +  
Sbjct: 217 KELYSRMVAIGVDGDNGTTQLLMRASLREEKPAEALEVFSRAIERGAEPDSLLYSLAVQA 276

Query: 413 LCKNNCVQEAVKLFHMLEMNKFEF-GIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVP 471
            CK   +  A  L   ++  K      E +  +I    K G +++A     ++   G+  
Sbjct: 277 CCKTLNLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMEDAIRWKDEMVSDGISM 336

Query: 472 TVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELL 531
            VV  + +I G C+   L  A D    ME  G +PN VTF+ L+  F +N +  K +E  
Sbjct: 337 NVVAATSLITGHCKNNDLGSALDLFYKMENEGPSPNSVTFSVLIERFSKNGEMEKALEFY 396

Query: 532 HKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKSSYRACL 576
            KM      L P       ++    K +K+ E   +   S+   L
Sbjct: 397 KKME--SLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGL 439


>gi|356523400|ref|XP_003530328.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Glycine max]
          Length = 664

 Score =  201 bits (511), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 137/468 (29%), Positives = 241/468 (51%), Gaps = 19/468 (4%)

Query: 92  DAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPD 151
           D  +  + ++   G  P     N L++     E G    N+      +++NM   G+ P+
Sbjct: 125 DRALKMFYRIKEFGCKPTVKIYNHLLDALLG-ESG----NKFHMIGAVYENMRGEGMEPN 179

Query: 152 VITYGTLINGFCRTGNLSVALRLHKKMVS-GDYENGLISKTNIFSYSIIIDSLCKEGLVD 210
           V TY  L+   C+ G L  A +L  +M   G   +G+       SY+ ++ ++C++G V+
Sbjct: 180 VFTYNVLLKALCKNGKLDGACKLLVEMSKRGCVPDGV-------SYTTVVAAMCEDGRVE 232

Query: 211 KAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMI 270
           +A+E+       G+   V VC  LI G C  G   EV GL  EM+  G  PN+++++ +I
Sbjct: 233 EAREVARRFGAEGV---VSVCNALICGLCREGRVGEVFGLMDEMVGNGVDPNVVSYSSVI 289

Query: 271 DCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCK 330
             L   G++  A  +L  MI+RG  P+  T++SLM GY L GR+     ++  M  +G +
Sbjct: 290 SWLSDVGEVELALAVLGKMIRRGCRPNVHTFSSLMKGYFLGGRVGEGVGLWRVMVLEGVR 349

Query: 331 HTVVSYNILINGYCKILNVEEAMSLYRQIISNGV-RQTVITYNTLLSGLFQAGQAGYAQK 389
             VV YN L+NG C   N+ EA+ +  ++  +   R  V TY+TL+ G  +AG    A +
Sbjct: 350 PNVVVYNTLLNGLCCSGNLAEAVDVCGRMEKDCFCRPNVTTYSTLVHGFVKAGDLQGASE 409

Query: 390 LFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLC 449
           ++++M    V P++  Y  ++D LCKN+   +A +L   +  +     +  FN  I GLC
Sbjct: 410 VWNKMVNCGVRPNVVVYTSMVDVLCKNSMFDQAYRLIDNMATDGCPPTVVTFNTFIKGLC 469

Query: 450 KAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVV 509
             GR+  A  +  ++ + G +P   TY+ ++ GL    +L++A + +  +E+     N+V
Sbjct: 470 CGGRVLWAMRVVDQMQRYGCLPDTRTYNELLDGLFSVNELKEACELIRELEERKVELNLV 529

Query: 510 TFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAK 557
           T+NT+M+GF  + K   V+++L +M      + PD  T ++V+   +K
Sbjct: 530 TYNTVMYGFSSHGKEEWVLQVLGRML--VNGVKPDAITVNVVIYAYSK 575



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 131/484 (27%), Positives = 237/484 (48%), Gaps = 22/484 (4%)

Query: 72  SPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVEN 131
            P + ++N+L  A+ KN   D       ++   G +PD ++   ++         +C + 
Sbjct: 177 EPNVFTYNVLLKALCKNGKLDGACKLLVEMSKRGCVPDGVSYTTVV-------AAMCEDG 229

Query: 132 RIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKT 191
           R++EA  + +   A GV   V     LI G CR G +     L  +MV     NG+    
Sbjct: 230 RVEEAREVARRFGAEGV---VSVCNALICGLCREGRVGEVFGLMDEMVG----NGV--DP 280

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
           N+ SYS +I  L   G V+ A  +  +M  RG  P V   ++L+ G+   G   E  GL+
Sbjct: 281 NVVSYSSVISWLSDVGEVELALAVLGKMIRRGCRPNVHTFSSLMKGYFLGGRVGEGVGLW 340

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGL-NPDRFTYNSLMDGYCL 310
             M+  G RPN++ +N +++ LC  G + EA  +   M +     P+  TY++L+ G+  
Sbjct: 341 RVMVLEGVRPNVVVYNTLLNGLCCSGNLAEAVDVCGRMEKDCFCRPNVTTYSTLVHGFVK 400

Query: 311 VGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVIT 370
            G +  A E++  M + G +  VV Y  +++  CK    ++A  L   + ++G   TV+T
Sbjct: 401 AGDLQGASEVWNKMVNCGVRPNVVVYTSMVDVLCKNSMFDQAYRLIDNMATDGCPPTVVT 460

Query: 371 YNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLE 430
           +NT + GL   G+  +A ++ D+M+ Y   PD  TYN L+DGL   N ++EA +L   LE
Sbjct: 461 FNTFIKGLCCGGRVLWAMRVVDQMQRYGCLPDTRTYNELLDGLFSVNELKEACELIRELE 520

Query: 431 MNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLE 490
             K E  +  +N ++ G    G+ +   ++  ++   G+ P  +T +++I+   + GK+ 
Sbjct: 521 ERKVELNLVTYNTVMYGFSSHGKEEWVLQVLGRMLVNGVKPDAITVNVVIYAYSKLGKVR 580

Query: 491 KANDFL--LYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTF 548
            A  FL  +   K  C P+++   +L+ G   +    + +  L+KM    + + P+  T+
Sbjct: 581 TAIQFLDRITAGKELC-PDIIAHTSLLWGICNSLGIEEAIVYLNKML--NKGIFPNIATW 637

Query: 549 SIVV 552
            ++V
Sbjct: 638 DVLV 641



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 128/468 (27%), Positives = 220/468 (47%), Gaps = 46/468 (9%)

Query: 142 NMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIID 201
           N +AF   P  +TY  +I    R   L     LH  +     E    S+    S+  +++
Sbjct: 65  NTLAFKHTP--LTYHVMIEKLGRNSELDA---LHYILHQMKIERIPCSQD---SFICVLN 116

Query: 202 SLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCC-AGN-WEEVNGLFIEMLDLGP 259
           S    GL D+A ++F  +K  G  P V +   L+      +GN +  +  ++  M   G 
Sbjct: 117 SYKNSGLGDRALKMFYRIKEFGCKPTVKIYNHLLDALLGESGNKFHMIGAVYENMRGEGM 176

Query: 260 RPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTARE 319
            PN+ T+NV++  LCK GK++ A  LL  M +RG  PD  +Y +++   C  GR++ ARE
Sbjct: 177 EPNVFTYNVLLKALCKNGKLDGACKLLVEMSKRGCVPDGVSYTTVVAAMCEDGRVEEARE 236

Query: 320 IFLSMHSKG------------CKH--------------------TVVSYNILINGYCKIL 347
           +     ++G            C+                      VVSY+ +I+    + 
Sbjct: 237 VARRFGAEGVVSVCNALICGLCREGRVGEVFGLMDEMVGNGVDPNVVSYSSVISWLSDVG 296

Query: 348 NVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYN 407
            VE A+++  ++I  G R  V T+++L+ G F  G+ G    L+  M L  V P++  YN
Sbjct: 297 EVELALAVLGKMIRRGCRPNVHTFSSLMKGYFLGGRVGEGVGLWRVMVLEGVRPNVVVYN 356

Query: 408 ILIDGLCKNNCVQEAVKLFHMLEMNKF-EFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQ 466
            L++GLC +  + EAV +   +E + F    +  ++ L+ G  KAG L  A E+++K+  
Sbjct: 357 TLLNGLCCSGNLAEAVDVCGRMEKDCFCRPNVTTYSTLVHGFVKAGDLQGASEVWNKMVN 416

Query: 467 KGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSK 526
            G+ P VV Y+ M+  LC+    ++A   +  M  +GC P VVTFNT + G     +   
Sbjct: 417 CGVRPNVVVYTSMVDVLCKNSMFDQAYRLIDNMATDGCPPTVVTFNTFIKGLCCGGRVLW 476

Query: 527 VVELLHKMAEPERNLVPDDTTFSIVVD-LLAKDEKYHECSAVSKSSYR 573
            + ++ +M       +PD  T++ ++D L + +E    C  + +   R
Sbjct: 477 AMRVVDQMQ--RYGCLPDTRTYNELLDGLFSVNELKEACELIRELEER 522



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 84/324 (25%), Positives = 144/324 (44%), Gaps = 17/324 (5%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTH-MQPSPPISSFNLLFGAVAKNRHYDAVISFYRK 100
           N  L+  C SG  NL EA    G M       P +++++ L     K          + K
Sbjct: 356 NTLLNGLCCSG--NLAEAVDVCGRMEKDCFCRPNVTTYSTLVHGFVKAGDLQGASEVWNK 413

Query: 101 LVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLIN 160
           +V+ G+ P+ +    +++        LC  +   +A  L  NM   G  P V+T+ T I 
Sbjct: 414 MVNCGVRPNVVVYTSMVDV-------LCKNSMFDQAYRLIDNMATDGCPPTVVTFNTFIK 466

Query: 161 GFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMK 220
           G C  G +  A+R+  +M       G +  T   +Y+ ++D L     + +A EL  E++
Sbjct: 467 GLCCGGRVLWAMRVVDQM----QRYGCLPDTR--TYNELLDGLFSVNELKEACELIRELE 520

Query: 221 GRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKIN 280
            R +   +V   T+++GF   G  E V  +   ML  G +P+ +T NV+I    K GK+ 
Sbjct: 521 ERKVELNLVTYNTVMYGFSSHGKEEWVLQVLGRMLVNGVKPDAITVNVVIYAYSKLGKVR 580

Query: 281 EANGLLE-LMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNIL 339
            A   L+ +   + L PD   + SL+ G C    I+ A      M +KG    + ++++L
Sbjct: 581 TAIQFLDRITAGKELCPDIIAHTSLLWGICNSLGIEEAIVYLNKMLNKGIFPNIATWDVL 640

Query: 340 INGYCKILNVEEAMSLYRQIISNG 363
           + G+ K L     + +   I+  G
Sbjct: 641 VRGFFKKLGHMGPIRILDDILGKG 664


>gi|186478651|ref|NP_173362.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806505|sp|Q9LN69.2|PPR50_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g19290
 gi|332191705|gb|AEE29826.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 904

 Score =  201 bits (511), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 120/427 (28%), Positives = 218/427 (51%), Gaps = 18/427 (4%)

Query: 95  ISFYRKLVSIGLLPDFLTLNILINCF---GNKERGLCVENRIKEATWLFKNMIAFGVRPD 151
           +  Y +++S  + PD  T +I++N +   GN ++ +      + +          G+  +
Sbjct: 210 LHVYDQMISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESS---------LGLELN 260

Query: 152 VITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDK 211
           V+TY +LING+   G++    R+ + M     E G+    N+ +Y+ +I   CK+GL+++
Sbjct: 261 VVTYNSLINGYAMIGDVEGMTRVLRLMS----ERGV--SRNVVTYTSLIKGYCKKGLMEE 314

Query: 212 AKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMID 271
           A+ +F  +K + +     +   L+ G+C  G   +   +   M+++G R N    N +I+
Sbjct: 315 AEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLIN 374

Query: 272 CLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKH 331
             CK G++ EA  +   M    L PD  TYN+L+DGYC  G +D A ++   M  K    
Sbjct: 375 GYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVP 434

Query: 332 TVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLF 391
           TV++YNIL+ GY +I    + +SL++ ++  GV    I+ +TLL  LF+ G    A KL+
Sbjct: 435 TVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLW 494

Query: 392 DEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKA 451
           + +    +  D  T N++I GLCK   V EA ++   + + + +  ++ +  L  G  K 
Sbjct: 495 ENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKV 554

Query: 452 GRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTF 511
           G L  A+ +   + +KG+ PT+  Y+ +I G  +   L K  D ++ +   G  P V T+
Sbjct: 555 GNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATY 614

Query: 512 NTLMHGF 518
             L+ G+
Sbjct: 615 GALITGW 621



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 125/479 (26%), Positives = 233/479 (48%), Gaps = 14/479 (2%)

Query: 59  ARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL-VSIGLLPDFLTLNILI 117
           A + +  M   + SP + + +++  A  ++ + D  + F ++   S+GL  + +T N LI
Sbjct: 209 ALHVYDQMISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLI 268

Query: 118 NCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKK 177
           N       G  +   ++  T + + M   GV  +V+TY +LI G+C+ G +  A  + + 
Sbjct: 269 N-------GYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFEL 321

Query: 178 MVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHG 237
           +     E  L++  ++  Y +++D  C+ G +  A  +   M   G+     +C +LI+G
Sbjct: 322 L----KEKKLVADQHM--YGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLING 375

Query: 238 FCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPD 297
           +C +G   E   +F  M D   +P+  T+N ++D  C+ G ++EA  L + M Q+ + P 
Sbjct: 376 YCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPT 435

Query: 298 RFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYR 357
             TYN L+ GY  +G       ++  M  +G     +S + L+    K+ +  EAM L+ 
Sbjct: 436 VMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWE 495

Query: 358 QIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNN 417
            +++ G+    IT N ++SGL +  +   A+++ D + ++  +P + TY  L  G  K  
Sbjct: 496 NVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVG 555

Query: 418 CVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYS 477
            ++EA  +   +E       IE++N LI G  K   L+   +L  +L  +GL PTV TY 
Sbjct: 556 NLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYG 615

Query: 478 IMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAE 536
            +I G C  G ++KA      M + G   NV   + + +   + +K  +   LL K+ +
Sbjct: 616 ALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSLFRLDKIDEACLLLQKIVD 674



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 138/562 (24%), Positives = 249/562 (44%), Gaps = 89/562 (15%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CK G+  + EA + F  +   +       + +L     +       +  +  ++ IG+  
Sbjct: 307 CKKGL--MEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRT 364

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           +    N LIN       G C   ++ EA  +F  M  + ++PD  TY TL++G+CR G +
Sbjct: 365 NTTICNSLIN-------GYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYV 417

Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
             AL+L  +M   +          + +Y+I++    + G       L+  M  RG+N   
Sbjct: 418 DEALKLCDQMCQKEV------VPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADE 471

Query: 229 VVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLL-- 286
           + C+TL+      G++ E   L+  +L  G   + +T NVMI  LCK  K+NEA  +L  
Sbjct: 472 ISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDN 531

Query: 287 ---------------------------------ELMIQRGLNPDRFTYNSLMDGYCLVGR 313
                                            E M ++G+ P    YN+L+ G      
Sbjct: 532 VNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRH 591

Query: 314 IDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNT 373
           ++   ++ + + ++G   TV +Y  LI G+C I  +++A +   ++I  G+   V   + 
Sbjct: 592 LNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSK 651

Query: 374 LLSGLFQAGQAGYA----QKLFD---------EMKLY----------------NVE---- 400
           + + LF+  +   A    QK+ D          +K +                +VE    
Sbjct: 652 IANSLFRLDKIDEACLLLQKIVDFDLLLPGYQSLKEFLEASATTCLKTQKIAESVENSTP 711

Query: 401 -----PDLSTYNILIDGLCKNNCVQEAVKLF-HMLEMNKFEFGIEIFNCLIDGLCKAGRL 454
                P+   YN+ I GLCK   +++A KLF  +L  ++F      +  LI G   AG +
Sbjct: 712 KKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDI 771

Query: 455 DNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTL 514
           + A+ L  ++  KG++P +VTY+ +I GLC+ G +++A   L  + + G  PN +T+NTL
Sbjct: 772 NKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTL 831

Query: 515 MHGFLQNNKTSKVVELLHKMAE 536
           + G +++   ++ + L  KM E
Sbjct: 832 IDGLVKSGNVAEAMRLKEKMIE 853



 Score =  141 bits (356), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 120/407 (29%), Positives = 192/407 (47%), Gaps = 35/407 (8%)

Query: 77  SFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEA 136
           S + L  A+ K   ++  +  +  +++ GLL D +TLN++I+       GLC   ++ EA
Sbjct: 473 SCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMIS-------GLCKMEKVNEA 525

Query: 137 TWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSY 196
             +  N+  F  +P V TY  L +G+ + GNL  A  + + M     E   I  T I  Y
Sbjct: 526 KEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYM-----ERKGIFPT-IEMY 579

Query: 197 SIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLD 256
           + +I    K   ++K  +L +E++ RG+ P V     LI G+C  G  ++      EM++
Sbjct: 580 NTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIE 639

Query: 257 LGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDT 316
            G   N+   + + + L +  KI+EA  LL+ ++          ++ L+ GY  +     
Sbjct: 640 KGITLNVNICSKIANSLFRLDKIDEACLLLQKIVD---------FDLLLPGYQSLKEFLE 690

Query: 317 A--------REIFLSMHSKGCKHTVVS----YNILINGYCKILNVEEAMSLYRQIIS-NG 363
           A        ++I  S+ +   K  +V     YN+ I G CK   +E+A  L+  ++S + 
Sbjct: 691 ASATTCLKTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDR 750

Query: 364 VRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAV 423
                 TY  L+ G   AG    A  L DEM L  + P++ TYN LI GLCK   V  A 
Sbjct: 751 FIPDEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQ 810

Query: 424 KLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLV 470
           +L H L           +N LIDGL K+G +  A  L  K+ +KGLV
Sbjct: 811 RLLHKLPQKGITPNAITYNTLIDGLVKSGNVAEAMRLKEKMIEKGLV 857



 Score =  102 bits (253), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 64/254 (25%), Positives = 128/254 (50%), Gaps = 3/254 (1%)

Query: 317 AREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISN-GVRQTVITYNTLL 375
           A  ++  M S      V + +I++N YC+  NV++AM   ++  S+ G+   V+TYN+L+
Sbjct: 209 ALHVYDQMISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLI 268

Query: 376 SGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFE 435
           +G    G      ++   M    V  ++ TY  LI G CK   ++EA  +F +L+  K  
Sbjct: 269 NGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLV 328

Query: 436 FGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDF 495
               ++  L+DG C+ G++ +A  +   + + G+       + +I+G C+ G+L +A   
Sbjct: 329 ADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQI 388

Query: 496 LLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLL 555
              M      P+  T+NTL+ G+ +     + ++L  +M + E  +VP   T++I++   
Sbjct: 389 FSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKE--VVPTVMTYNILLKGY 446

Query: 556 AKDEKYHECSAVSK 569
           ++   +H+  ++ K
Sbjct: 447 SRIGAFHDVLSLWK 460


>gi|297734659|emb|CBI16710.3| unnamed protein product [Vitis vinifera]
          Length = 569

 Score =  201 bits (511), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 146/537 (27%), Positives = 250/537 (46%), Gaps = 64/537 (11%)

Query: 58  EARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILI 117
           +A    G M  +   P  S   +LF  + +   Y  V   ++ ++  G  P   T + +I
Sbjct: 4   QALEILGRMREVGVRPSASGVAILFKLLLRVGDYGNVWKLFKDVIRRGPQPCKYTFSGII 63

Query: 118 NCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKK 177
                   G C +  I     L   M  F   P+   Y  +IN  C  G  S AL     
Sbjct: 64  -------LGFCRKGCIHLGESLLHLMPKFHCEPNAFAYNIVINACCIRGRTSDALAWFNL 116

Query: 178 MVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHG 237
           M+    E G      + +++ +I++ CKEG V +A++LF  +K  G +P  ++  TL++G
Sbjct: 117 MI----ERG--CNPTVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYNTLMNG 170

Query: 238 FCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPD 297
           +      ++ N L+ EM   G  P+ +TFN+++    K G+  + + LL+ +   GL PD
Sbjct: 171 YVKMREIDQANMLYEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVLGLLPD 230

Query: 298 RFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGY-------------- 343
           R  ++  + G C  GR+D A E  + M  KG   +++++N +I  Y              
Sbjct: 231 RSLFDISVSGLCWAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYK 290

Query: 344 -------------CKIL--------NVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAG 382
                        C  L         ++EA  L  Q+I  G+    + +  LL   F+ G
Sbjct: 291 LMVHFGLTPSPSTCSSLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLDKFFKRG 350

Query: 383 QAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM-------NKFE 435
               AQ L+ EM+   + PD+  ++  IDGL K   V+EA  +F  LEM       N F 
Sbjct: 351 DVVGAQSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVF--LEMLRKGLIPNNFA 408

Query: 436 FGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDF 495
                +N LI G CK G+L+ A +L   +  +GL+P + T +++I GLC++G++  A + 
Sbjct: 409 -----YNSLICGFCKCGKLNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINV 463

Query: 496 LLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVV 552
            + M + G +P+++T+NTL++G+ +         L+++M     N  PD TT++I +
Sbjct: 464 FMDMHQTGLSPDIITYNTLINGYCKAFDMVNADNLVNRMYASGSN--PDLTTYNIRI 518



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 130/491 (26%), Positives = 239/491 (48%), Gaps = 25/491 (5%)

Query: 49  CKSGIINLNEARYFFGYMTHMQP----SPPISSFNLLFGAVAKNRHYDAVISFYRKLVSI 104
           C+ G I+L E+      + H+ P     P   ++N++  A          ++++  ++  
Sbjct: 67  CRKGCIHLGES------LLHLMPKFHCEPNAFAYNIVINACCIRGRTSDALAWFNLMIER 120

Query: 105 GLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCR 164
           G  P  +T N +IN F       C E  + EA  LF  +   G  P+ I Y TL+NG+ +
Sbjct: 121 GCNPTVVTFNTVINAF-------CKEGNVVEARKLFDGLKEMGFSPNAIMYNTLMNGYVK 173

Query: 165 TGNLSVALRLHKKMVS-GDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRG 223
              +  A  L+++M   G   +G+       +++I++    K G  +    L  ++   G
Sbjct: 174 MREIDQANMLYEEMRKKGIAPDGI-------TFNILVSGHYKYGREEDGDRLLKDISVLG 226

Query: 224 INPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEAN 283
           + P   +    + G C AG  +E     ++ML+ G  P+++ FN +I    + G  ++A 
Sbjct: 227 LLPDRSLFDISVSGLCWAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAF 286

Query: 284 GLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGY 343
              +LM+  GL P   T +SL+ G  + GR+  A E+   M  KG     +++ +L++ +
Sbjct: 287 EAYKLMVHFGLTPSPSTCSSLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLDKF 346

Query: 344 CKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDL 403
            K  +V  A SL+ ++   G+   V+ ++  + GL + G    A  +F EM    + P+ 
Sbjct: 347 FKRGDVVGAQSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNN 406

Query: 404 STYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHK 463
             YN LI G CK   + EA+KL  ++        I   N +I GLCK GR+ +A  +F  
Sbjct: 407 FAYNSLICGFCKCGKLNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMD 466

Query: 464 LPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNK 523
           + Q GL P ++TY+ +I+G C+   +  A++ +  M  +G  P++ T+N  +HGF  + +
Sbjct: 467 MHQTGLSPDIITYNTLINGYCKAFDMVNADNLVNRMYASGSNPDLTTYNIRIHGFCSSRR 526

Query: 524 TSKVVELLHKM 534
            ++ V +L ++
Sbjct: 527 MNRAVLMLDEL 537



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 122/430 (28%), Positives = 205/430 (47%), Gaps = 15/430 (3%)

Query: 41  LNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRK 100
            N  ++  CK G  N+ EAR  F  +  M  SP    +N L     K R  D     Y +
Sbjct: 129 FNTVINAFCKEG--NVVEARKLFDGLKEMGFSPNAIMYNTLMNGYVKMREIDQANMLYEE 186

Query: 101 LVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLIN 160
           +   G+ PD +T NIL++  G+ + G     R ++   L K++   G+ PD   +   ++
Sbjct: 187 MRKKGIAPDGITFNILVS--GHYKYG-----REEDGDRLLKDISVLGLLPDRSLFDISVS 239

Query: 161 GFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMK 220
           G C  G L  A+     M+    E GL    +I +++ +I +  + GL DKA E +  M 
Sbjct: 240 GLCWAGRLDEAMEFLMDML----EKGL--SPSIIAFNSVIAAYSQAGLEDKAFEAYKLMV 293

Query: 221 GRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKIN 280
             G+ P+   C++L+ G    G  +E   L  +M++ G   N + F V++D   K G + 
Sbjct: 294 HFGLTPSPSTCSSLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVV 353

Query: 281 EANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILI 340
            A  L   M +RG+ PD   +++ +DG    G ++ A  +FL M  KG      +YN LI
Sbjct: 354 GAQSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLI 413

Query: 341 NGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVE 400
            G+CK   + EA+ L + +   G+   + T N ++ GL + G+   A  +F +M    + 
Sbjct: 414 CGFCKCGKLNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMDMHQTGLS 473

Query: 401 PDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWEL 460
           PD+ TYN LI+G CK   +  A  L + +  +     +  +N  I G C + R++ A  +
Sbjct: 474 PDIITYNTLINGYCKAFDMVNADNLVNRMYASGSNPDLTTYNIRIHGFCSSRRMNRAVLM 533

Query: 461 FHKLPQKGLV 470
             +L   G++
Sbjct: 534 LDELVSAGIL 543


>gi|255553139|ref|XP_002517612.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223543244|gb|EEF44776.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 794

 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 147/538 (27%), Positives = 241/538 (44%), Gaps = 51/538 (9%)

Query: 56  LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIG-LLPDFLTLN 114
            +E       M      P   +F+L+    A     D  + FYR  + I   +PD  + N
Sbjct: 82  FSEVESLLKIMKSKDLMPTREAFSLVISVFADCGLVDRALEFYRTFIKIHHCVPDVFSCN 141

Query: 115 ILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRL 174
            L+N        L    +++ A  ++  M+      D  T   ++ G C+ G +    +L
Sbjct: 142 SLLNV-------LVKHGKVEIACKVYDEMVDRNGEVDNYTVCIMVKGLCKEGKVEDGWKL 194

Query: 175 HKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTL 234
            +K        G     NI  Y+ +ID  CK+G  ++A  LF E+K +G  P V     +
Sbjct: 195 IEK------RWGRGCMPNIVFYNTLIDGYCKKGDTERANVLFKELKMKGFLPTVKTYGAI 248

Query: 235 IHGFCCAGNWEEVNGLFIEM----LDL-------------------------------GP 259
           I+GFC  G +E V+ L +EM    LD+                               G 
Sbjct: 249 INGFCKKGKFEVVDKLLVEMSERGLDVSIHIYNNIIDAQFKHGCRIEAADTVGWMIKSGC 308

Query: 260 RPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTARE 319
            P++ T+N++I   C  G++++A  LLE  I+RGL P++ +Y  L+  YC  G    A +
Sbjct: 309 DPDMATYNILITGSCSCGEVHKAEQLLEQAIKRGLLPNKVSYTPLIHNYCKQGEYLRALD 368

Query: 320 IFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLF 379
           + + M  +G K  +V+Y  LI+G      V+ A+++  +++  GV      YN L+SGL 
Sbjct: 369 LLIKMSERGHKPDLVTYAALIHGLIVAGEVDVALTVRNKMVEKGVLPDANIYNVLMSGLC 428

Query: 380 QAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIE 439
           + G+   A+ L  EM   NV PD      L+DG  ++   +EA KLF +      + G+ 
Sbjct: 429 KKGRLPAAKVLLAEMLDQNVAPDAFITATLVDGFIRHGDFEEAKKLFELTIEKGIDPGVV 488

Query: 440 IFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYM 499
            +N +I G CK G + +A   F ++ Q    P   TYS +I G  +   L  A      M
Sbjct: 489 GYNAMIKGYCKFGMMKDALLCFKRMIQGLHSPDEFTYSTIIDGYIKMNDLHGALRMFGLM 548

Query: 500 EKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAK 557
            K  C PNVVT+  L++GF  +   ++  +   +M      L P+  T++I++    K
Sbjct: 549 VKGACKPNVVTYTLLINGFCLSGDINRAEKTFKQML--SLRLKPNVVTYTILIGCFCK 604



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 135/491 (27%), Positives = 235/491 (47%), Gaps = 25/491 (5%)

Query: 58  EARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILI 117
           EA    G+M      P ++++N+L                  + +  GLLP+ ++   LI
Sbjct: 295 EAADTVGWMIKSGCDPDMATYNILITGSCSCGEVHKAEQLLEQAIKRGLLPNKVSYTPLI 354

Query: 118 NCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKK 177
           + +       C +     A  L   M   G +PD++TY  LI+G    G + VAL +  K
Sbjct: 355 HNY-------CKQGEYLRALDLLIKMSERGHKPDLVTYAALIHGLIVAGEVDVALTVRNK 407

Query: 178 MVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHG 237
           MV    E G++   NI  Y++++  LCK+G +  AK L  EM  + + P   +  TL+ G
Sbjct: 408 MV----EKGVLPDANI--YNVLMSGLCKKGRLPAAKVLLAEMLDQNVAPDAFITATLVDG 461

Query: 238 FCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPD 297
           F   G++EE   LF   ++ G  P ++ +N MI   CK G + +A    + MIQ   +PD
Sbjct: 462 FIRHGDFEEAKKLFELTIEKGIDPGVVGYNAMIKGYCKFGMMKDALLCFKRMIQGLHSPD 521

Query: 298 RFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYR 357
            FTY++++DGY  +  +  A  +F  M    CK  VV+Y +LING+C   ++  A   ++
Sbjct: 522 EFTYSTIIDGYIKMNDLHGALRMFGLMVKGACKPNVVTYTLLINGFCLSGDINRAEKTFK 581

Query: 358 QIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKN- 416
           Q++S  ++  V+TY  L+    +      A   F++M +    P+  TYN L++GL  N 
Sbjct: 582 QMLSLRLKPNVVTYTILIGCFCKGVNLTKACSFFEQMLMEKCLPNDVTYNYLMNGLTNNV 641

Query: 417 -----NCVQE------AVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLP 465
                N   E       ++ F M+  + ++     +N ++  LC+   + +A  L  K+ 
Sbjct: 642 DFVISNQRSEQTENSLVLESFGMMISDGWDRRAASYNSILICLCQHKMVKHALHLRDKMM 701

Query: 466 QKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTS 525
            KG +P  V+   ++HGLC +G+ +  N+ +            V ++  +  FL   +TS
Sbjct: 702 SKGFLPDPVSLVALLHGLCLEGRSQDWNNVISCKLNERELQVAVKYSEKLDAFLSQGQTS 761

Query: 526 KVVELLHKMAE 536
           +   +LH +A+
Sbjct: 762 EASLILHSLAD 772



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 128/446 (28%), Positives = 211/446 (47%), Gaps = 36/446 (8%)

Query: 105 GLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCR 164
           G +P+ +  N LI+       G C +   + A  LFK +   G  P V TYG +INGFC+
Sbjct: 202 GCMPNIVFYNTLID-------GYCKKGDTERANVLFKELKMKGFLPTVKTYGAIINGFCK 254

Query: 165 TGN---------------LSVALRLHKKMVSGDYENGLISKT--------------NIFS 195
            G                L V++ ++  ++   +++G   +               ++ +
Sbjct: 255 KGKFEVVDKLLVEMSERGLDVSIHIYNNIIDAQFKHGCRIEAADTVGWMIKSGCDPDMAT 314

Query: 196 YSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEML 255
           Y+I+I   C  G V KA++L  +   RG+ P  V  T LIH +C  G +     L I+M 
Sbjct: 315 YNILITGSCSCGEVHKAEQLLEQAIKRGLLPNKVSYTPLIHNYCKQGEYLRALDLLIKMS 374

Query: 256 DLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRID 315
           + G +P+L+T+  +I  L   G+++ A  +   M+++G+ PD   YN LM G C  GR+ 
Sbjct: 375 ERGHKPDLVTYAALIHGLIVAGEVDVALTVRNKMVEKGVLPDANIYNVLMSGLCKKGRLP 434

Query: 316 TAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLL 375
            A+ +   M  +           L++G+ +  + EEA  L+   I  G+   V+ YN ++
Sbjct: 435 AAKVLLAEMLDQNVAPDAFITATLVDGFIRHGDFEEAKKLFELTIEKGIDPGVVGYNAMI 494

Query: 376 SGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFE 435
            G  + G    A   F  M      PD  TY+ +IDG  K N +  A+++F ++     +
Sbjct: 495 KGYCKFGMMKDALLCFKRMIQGLHSPDEFTYSTIIDGYIKMNDLHGALRMFGLMVKGACK 554

Query: 436 FGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDF 495
             +  +  LI+G C +G ++ A + F ++    L P VVTY+I+I   C+   L KA  F
Sbjct: 555 PNVVTYTLLINGFCLSGDINRAEKTFKQMLSLRLKPNVVTYTILIGCFCKGVNLTKACSF 614

Query: 496 LLYMEKNGCAPNVVTFNTLMHGFLQN 521
              M    C PN VT+N LM+G   N
Sbjct: 615 FEQMLMEKCLPNDVTYNYLMNGLTNN 640



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 107/370 (28%), Positives = 172/370 (46%), Gaps = 3/370 (0%)

Query: 195 SYSIIIDSLCKEGLVDKAKELFLE-MKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIE 253
           ++S++I      GLVD+A E +   +K     P V  C +L++     G  E    ++ E
Sbjct: 103 AFSLVISVFADCGLVDRALEFYRTFIKIHHCVPDVFSCNSLLNVLVKHGKVEIACKVYDE 162

Query: 254 MLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGR 313
           M+D     +  T  +M+  LCK GK+ +   L+E    RG  P+   YN+L+DGYC  G 
Sbjct: 163 MVDRNGEVDNYTVCIMVKGLCKEGKVEDGWKLIEKRWGRGCMPNIVFYNTLIDGYCKKGD 222

Query: 314 IDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNT 373
            + A  +F  +  KG   TV +Y  +ING+CK    E    L  ++   G+  ++  YN 
Sbjct: 223 TERANVLFKELKMKGFLPTVKTYGAIINGFCKKGKFEVVDKLLVEMSERGLDVSIHIYNN 282

Query: 374 LLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNK 433
           ++   F+ G    A      M     +PD++TYNILI G C    V +A +L        
Sbjct: 283 IIDAQFKHGCRIEAADTVGWMIKSGCDPDMATYNILITGSCSCGEVHKAEQLLEQAIKRG 342

Query: 434 FEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKAN 493
                  +  LI   CK G    A +L  K+ ++G  P +VTY+ +IHGL   G+++ A 
Sbjct: 343 LLPNKVSYTPLIHNYCKQGEYLRALDLLIKMSERGHKPDLVTYAALIHGLIVAGEVDVAL 402

Query: 494 DFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
                M + G  P+   +N LM G  +  +      LL +M   ++N+ PD    + +VD
Sbjct: 403 TVRNKMVEKGVLPDANIYNVLMSGLCKKGRLPAAKVLLAEML--DQNVAPDAFITATLVD 460

Query: 554 LLAKDEKYHE 563
              +   + E
Sbjct: 461 GFIRHGDFEE 470



 Score =  105 bits (261), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 75/285 (26%), Positives = 139/285 (48%), Gaps = 7/285 (2%)

Query: 280 NEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREI---FLSMHSKGCKHTVVSY 336
           +E   LL++M  + L P R  ++ ++  +   G +D A E    F+ +H   C   V S 
Sbjct: 83  SEVESLLKIMKSKDLMPTREAFSLVISVFADCGLVDRALEFYRTFIKIHH--CVPDVFSC 140

Query: 337 NILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKL 396
           N L+N   K   VE A  +Y +++         T   ++ GL + G+     KL ++   
Sbjct: 141 NSLLNVLVKHGKVEIACKVYDEMVDRNGEVDNYTVCIMVKGLCKEGKVEDGWKLIEKRWG 200

Query: 397 YNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDN 456
               P++  YN LIDG CK    + A  LF  L+M  F   ++ +  +I+G CK G+ + 
Sbjct: 201 RGCMPNIVFYNTLIDGYCKKGDTERANVLFKELKMKGFLPTVKTYGAIINGFCKKGKFEV 260

Query: 457 AWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMH 516
             +L  ++ ++GL  ++  Y+ +I    + G   +A D + +M K+GC P++ T+N L+ 
Sbjct: 261 VDKLLVEMSERGLDVSIHIYNNIIDAQFKHGCRIEAADTVGWMIKSGCDPDMATYNILIT 320

Query: 517 GFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKY 561
           G     +  K  +LL +    +R L+P+  +++ ++    K  +Y
Sbjct: 321 GSCSCGEVHKAEQLLEQAI--KRGLLPNKVSYTPLIHNYCKQGEY 363



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 65/272 (23%), Positives = 115/272 (42%), Gaps = 30/272 (11%)

Query: 29  RQIAAVSSPETQLNEFLHENCKSGIINLNE---ARYFFGYMTHMQPSPPISSFNLLFGAV 85
           R I  + SP+    EF +     G I +N+   A   FG M      P + ++ LL    
Sbjct: 512 RMIQGLHSPD----EFTYSTIIDGYIKMNDLHGALRMFGLMVKGACKPNVVTYTLLINGF 567

Query: 86  AKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIA 145
             +   +     +++++S+ L P+ +T  ILI CF       C    + +A   F+ M+ 
Sbjct: 568 CLSGDINRAEKTFKQMLSLRLKPNVVTYTILIGCF-------CKGVNLTKACSFFEQMLM 620

Query: 146 FGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKT-----------NIF 194
               P+ +TY  L+NG   T N+   +   +   S   EN L+ ++              
Sbjct: 621 EKCLPNDVTYNYLMNGL--TNNVDFVISNQR---SEQTENSLVLESFGMMISDGWDRRAA 675

Query: 195 SYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEM 254
           SY+ I+  LC+  +V  A  L  +M  +G  P  V    L+HG C  G  ++ N +    
Sbjct: 676 SYNSILICLCQHKMVKHALHLRDKMMSKGFLPDPVSLVALLHGLCLEGRSQDWNNVISCK 735

Query: 255 LDLGPRPNLLTFNVMIDCLCKGGKINEANGLL 286
           L+       + ++  +D     G+ +EA+ +L
Sbjct: 736 LNERELQVAVKYSEKLDAFLSQGQTSEASLIL 767


>gi|449527621|ref|XP_004170808.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g13630-like [Cucumis
           sativus]
          Length = 830

 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 123/433 (28%), Positives = 220/433 (50%), Gaps = 10/433 (2%)

Query: 132 RIKEATWLFKNMIAFGVRPDV-ITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISK 190
           R  +  W   N I     P    T   LI+G C    L  A       +S  +++  +  
Sbjct: 216 RHTDIMWDVYNEIKVSGAPQSECTTSILIHGLCEQSKLEDA-------ISFLHDSNKVVG 268

Query: 191 TNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGL 250
            +I S + I+   CK GL+D A+  F  M   G+         L+HG C AG+ +E  G 
Sbjct: 269 PSIVSINTIMSKFCKVGLIDVARSXFCLMVKNGLLHDSFSYNILLHGLCVAGSMDEALGF 328

Query: 251 FIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCL 310
             +M   G  P+++T+N +       G ++ A  +++ M+ +GLNPD  TY +L+ G+C 
Sbjct: 329 TDDMEKHGVEPDVVTYNTLAKGFLLLGLMSGARKVVQKMLLQGLNPDLVTYTTLICGHCQ 388

Query: 311 VGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVIT 370
           +G I+ A ++     S+G K  V+ YN+L++  CK+  +EEA++L+ ++ +  +    I 
Sbjct: 389 MGNIEEALKLRQETLSRGFKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLRLEPDFIV 448

Query: 371 YNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLE 430
           Y+ L+ GL + G    A +L+++M+L    P       ++ GL KN  + EA   F    
Sbjct: 449 YSILIHGLCKEGFVQRAYQLYEQMRLKRKFPHHFAQRAVLLGLFKNGNISEARNYFDTWT 508

Query: 431 MNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLE 490
                  + ++N +IDG  +   +  A +L++K+ ++G+ P+VVT++ +I+G CR+G L 
Sbjct: 509 RMDLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIERGITPSVVTFNTLINGFCRRGDLM 568

Query: 491 KANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSI 550
           +A   L  +   G  P+VVT+ TLM+ + +     ++   LH+M      +VP   T+++
Sbjct: 569 EARKMLEVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEM--EANAVVPTHVTYTV 626

Query: 551 VVDLLAKDEKYHE 563
           ++  L +  K HE
Sbjct: 627 LIKGLCRQNKMHE 639



 Score =  198 bits (503), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 134/484 (27%), Positives = 223/484 (46%), Gaps = 52/484 (10%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
           P I S N +     K    D   S +  +V  GLL D  + NIL++       GLCV   
Sbjct: 269 PSIVSINTIMSKFCKVGLIDVARSXFCLMVKNGLLHDSFSYNILLH-------GLCVAGS 321

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
           + EA     +M   GV PDV+TY TL  GF   G                          
Sbjct: 322 MDEALGFTDDMEKHGVEPDVVTYNTLAKGFLLLG-------------------------- 355

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
                          L+  A+++  +M  +G+NP +V  TTLI G C  GN EE   L  
Sbjct: 356 ---------------LMSGARKVVQKMLLQGLNPDLVTYTTLICGHCQMGNIEEALKLRQ 400

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
           E L  G + N++ +N+++ CLCK G+I EA  L + M    L PD   Y+ L+ G C  G
Sbjct: 401 ETLSRGFKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLRLEPDFIVYSILIHGLCKEG 460

Query: 313 RIDTAREIFLSMH-SKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
            +  A +++  M   +   H      +L+ G  K  N+ EA + +       + + V+ Y
Sbjct: 461 FVQRAYQLYEQMRLKRKFPHHFAQRAVLL-GLFKNGNISEARNYFDTWTRMDLMEDVVLY 519

Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
           N ++ G  +      A +L+ +M    + P + T+N LI+G C+   + EA K+  ++ +
Sbjct: 520 NIMIDGYVRLDGIAEAMQLYYKMIERGITPSVVTFNTLINGFCRRGDLMEARKMLEVIRL 579

Query: 432 NKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEK 491
                 +  +  L++  C+ G +   +   H++    +VPT VTY+++I GLCR+ K+ +
Sbjct: 580 KGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANAVVPTHVTYTVLIKGLCRQNKMHE 639

Query: 492 ANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIV 551
           +   L YM   G  P+ VT+NT++  F +  + +K ++L + M     N  P   T+ ++
Sbjct: 640 SLQLLEYMYAKGLLPDSVTYNTIIQCFCKGKEITKALQLYNMML--LHNCDPTQVTYKVL 697

Query: 552 VDLL 555
           ++ L
Sbjct: 698 INAL 701



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 138/517 (26%), Positives = 243/517 (47%), Gaps = 17/517 (3%)

Query: 41  LNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRK 100
           +N  + + CK G+I++  AR  F  M          S+N+L   +      D  + F   
Sbjct: 274 INTIMSKFCKVGLIDV--ARSXFCLMVKNGLLHDSFSYNILLHGLCVAGSMDEALGFTDD 331

Query: 101 LVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLIN 160
           +   G+ PD +T N L        +G  +   +  A  + + M+  G+ PD++TY TLI 
Sbjct: 332 MEKHGVEPDVVTYNTL-------AKGFLLLGLMSGARKVVQKMLLQGLNPDLVTYTTLIC 384

Query: 161 GFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMK 220
           G C+ GN+  AL+L ++ +S  +      K N+  Y++++  LCK G +++A  LF EM+
Sbjct: 385 GHCQMGNIEEALKLRQETLSRGF------KLNVIFYNMLLSCLCKVGRIEEALTLFDEME 438

Query: 221 GRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKIN 280
              + P  +V + LIHG C  G  +    L+ +M      P+      ++  L K G I+
Sbjct: 439 TLRLEPDFIVYSILIHGLCKEGFVQRAYQLYEQMRLKRKFPHHFAQRAVLLGLFKNGNIS 498

Query: 281 EANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILI 340
           EA    +   +  L  D   YN ++DGY  +  I  A +++  M  +G   +VV++N LI
Sbjct: 499 EARNYFDTWTRMDLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIERGITPSVVTFNTLI 558

Query: 341 NGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVE 400
           NG+C+  ++ EA  +   I   G+  +V+TY TL++   + G          EM+   V 
Sbjct: 559 NGFCRRGDLMEARKMLEVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANAVV 618

Query: 401 PDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWEL 460
           P   TY +LI GLC+ N + E+++L   +           +N +I   CK   +  A +L
Sbjct: 619 PTHVTYTVLIKGLCRQNKMHESLQLLEYMYAKGLLPDSVTYNTIIQCFCKGKEITKALQL 678

Query: 461 FHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQ 520
           ++ +      PT VTY ++I+ LC  G L+  +  ++ +E         T+ T++     
Sbjct: 679 YNMMLLHNCDPTQVTYKVLINALCIFGDLKDVDRMVVSIEDRNITLKKXTYMTIIKAHCA 738

Query: 521 NNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAK 557
             + SK +   ++M    +  V     +S V++ L K
Sbjct: 739 KGQVSKALGYFNQML--AKGFVISIRDYSAVINRLCK 773



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 62/218 (28%), Positives = 113/218 (51%), Gaps = 8/218 (3%)

Query: 336 YNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMK 395
           +++L   Y +   + +A+ +  ++     + +V TYN+LL  +           +++E+K
Sbjct: 173 WDMLAFAYSRHEMIHDALFVIAKMKDLNFQASVPTYNSLLHNM---RHTDIMWDVYNEIK 229

Query: 396 LYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEF-GIEIFNCLIDGLCKAGRL 454
           +        T +ILI GLC+ + +++A+   H  + NK     I   N ++   CK G +
Sbjct: 230 VSGAPQSECTTSILIHGLCEQSKLEDAISFLH--DSNKVVGPSIVSINTIMSKFCKVGLI 287

Query: 455 DNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTL 514
           D A   F  + + GL+    +Y+I++HGLC  G +++A  F   MEK+G  P+VVT+NTL
Sbjct: 288 DVARSXFCLMVKNGLLHDSFSYNILLHGLCVAGSMDEALGFTDDMEKHGVEPDVVTYNTL 347

Query: 515 MHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVV 552
             GFL     S   +++ KM    + L PD  T++ ++
Sbjct: 348 AKGFLLLGLMSGARKVVQKML--LQGLNPDLVTYTTLI 383



 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 30/124 (24%), Positives = 62/124 (50%), Gaps = 4/124 (3%)

Query: 395 KLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRL 454
           K  N + +   +++L     ++  + +A+ +   ++   F+  +  +N L+  +      
Sbjct: 162 KFRNWDSNGLVWDMLAFAYSRHEMIHDALFVIAKMKDLNFQASVPTYNSLLHNM---RHT 218

Query: 455 DNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTL 514
           D  W++++++   G   +  T SI+IHGLC + KLE A  F L+       P++V+ NT+
Sbjct: 219 DIMWDVYNEIKVSGAPQSECTTSILIHGLCEQSKLEDAISF-LHDSNKVVGPSIVSINTI 277

Query: 515 MHGF 518
           M  F
Sbjct: 278 MSKF 281


>gi|449489553|ref|XP_004158346.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g55840-like [Cucumis sativus]
          Length = 1079

 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 141/502 (28%), Positives = 243/502 (48%), Gaps = 20/502 (3%)

Query: 66  MTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKER 125
           M +   +P   S+N L     K          + +++ + L P+ +T NILIN       
Sbjct: 271 MRNKMITPNEVSYNTLINGFVKEGKIGVATRVFNEMIELNLSPNLITYNILIN------- 323

Query: 126 GLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYEN 185
           G C+    +EA  L   M A  VRP+ +T GTL+NG  ++    VA  +         E 
Sbjct: 324 GYCINGNFEEALRLLDVMEANDVRPNEVTIGTLLNGLYKSAKFDVARNI--------LER 375

Query: 186 GLISKT--NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGN 243
             I++T  N  S++++ID LC+ GL+D+A +L +EM   G+ P ++  + LI+GFC  GN
Sbjct: 376 YSINRTSLNCISHTVMIDGLCRNGLLDEAFQLLIEMCKDGVYPDIITFSVLINGFCKVGN 435

Query: 244 WEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNS 303
             +   +  ++   G  PN + F+ +I   CK G + E       M   G N D FT NS
Sbjct: 436 LNKAKEVMSKIYREGFVPNNVIFSTLIYNSCKVGNVYEGMKFYAAMNLNGQNADNFTCNS 495

Query: 304 LMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNG 363
           L+   C  G++  A E    +   G     V+++ +INGY  + +   A S++ ++IS G
Sbjct: 496 LVASLCENGKLVEAEEFLHHISRIGLVPNSVTFDCIINGYANVGDGSGAFSVFDKMISCG 555

Query: 364 VRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAV 423
              +  TY +LL  L +      A+KL  ++    +  D  +YN LI  + K+  + EAV
Sbjct: 556 HHPSPFTYGSLLKVLCKGQNFWEARKLLKKLHCIPLAVDTISYNTLIVEISKSGNLLEAV 615

Query: 424 KLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVP-TVVTYSIMIHG 482
           +LF  +  N        + C++ GL + GRL  A+    +L QK ++    + Y+  I G
Sbjct: 616 RLFEEMIQNNILPDSYTYTCILSGLIREGRLVCAFIFLGRLMQKEILTLNSIVYTCFIDG 675

Query: 483 LCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLV 542
           L + G+ + A      ME+ G + +++  N++  G+ +  K      L+ K     +N++
Sbjct: 676 LFKAGQSKAALYLFKEMEEKGLSLDLIALNSITDGYSRMGKVFSASSLISK--TRNKNVI 733

Query: 543 PDDTTFSIVVDLLAKDEKYHEC 564
           P+ TTF+I++   ++ +    C
Sbjct: 734 PNLTTFNILLHGYSRGQDIMSC 755



 Score =  181 bits (460), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 104/357 (29%), Positives = 186/357 (52%), Gaps = 2/357 (0%)

Query: 196 YSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEML 255
           + ++I    ++G+V  A   F  M  RG  P+V  C  ++           V   F +ML
Sbjct: 108 FDLLIRVYLRQGMVGHAVNTFSSMLIRGFKPSVYTCNMIMASMVKNCRAHLVWXFFKQML 167

Query: 256 DLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRID 315
                PN+ +FN++I  LC  GK+ +A  +L +M + G  P   +YN+L+   C  GR  
Sbjct: 168 TSRVCPNVSSFNILISVLCVQGKLKKAVNILTMMERNGYVPTIVSYNTLLSWCCKKGRFK 227

Query: 316 TAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLL 375
            A  +   M  KG +  V +YN+ I+  C+     +   + +++ +  +    ++YNTL+
Sbjct: 228 FALVLIHHMECKGIQADVCTYNMFIDSLCRNSRSAQGYLVLKKMRNKMITPNEVSYNTLI 287

Query: 376 SGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFE 435
           +G  + G+ G A ++F+EM   N+ P+L TYNILI+G C N   +EA++L  ++E N   
Sbjct: 288 NGFVKEGKIGVATRVFNEMIELNLSPNLITYNILINGYCINGNFEEALRLLDVMEANDVR 347

Query: 436 FGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDF 495
                   L++GL K+ + D A  +  +          +++++MI GLCR G L++A   
Sbjct: 348 PNEVTIGTLLNGLYKSAKFDVARNILERYSINRTSLNCISHTVMIDGLCRNGLLDEAFQL 407

Query: 496 LLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVV 552
           L+ M K+G  P+++TF+ L++GF +    +K  E++ K+       VP++  FS ++
Sbjct: 408 LIEMCKDGVYPDIITFSVLINGFCKVGNLNKAKEVMSKIY--REGFVPNNVIFSTLI 462



 Score =  178 bits (451), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 126/523 (24%), Positives = 238/523 (45%), Gaps = 50/523 (9%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
           P + + N++  ++ KN     V  F++++++  + P+  + NILI+        LCV+ +
Sbjct: 138 PSVYTCNMIMASMVKNCRAHLVWXFFKQMLTSRVCPNVSSFNILISV-------LCVQGK 190

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
           +K+A  +   M   G  P +++Y TL++  C+ G    AL L   M     +       +
Sbjct: 191 LKKAVNILTMMERNGYVPTIVSYNTLLSWCCKKGRFKFALVLIHHMECKGIQ------AD 244

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
           + +Y++ IDSLC+     +   +  +M+ + I P  V   TLI+GF   G       +F 
Sbjct: 245 VCTYNMFIDSLCRNSRSAQGYLVLKKMRNKMITPNEVSYNTLINGFVKEGKIGVATRVFN 304

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLM------- 305
           EM++L   PNL+T+N++I+  C  G   EA  LL++M    + P+  T  +L+       
Sbjct: 305 EMIELNLSPNLITYNILINGYCINGNFEEALRLLDVMEANDVRPNEVTIGTLLNGLYKSA 364

Query: 306 ----------------------------DGYCLVGRIDTAREIFLSMHSKGCKHTVVSYN 337
                                       DG C  G +D A ++ + M   G    +++++
Sbjct: 365 KFDVARNILERYSINRTSLNCISHTVMIDGLCRNGLLDEAFQLLIEMCKDGVYPDIITFS 424

Query: 338 ILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLY 397
           +LING+CK+ N+ +A  +  +I   G     + ++TL+    + G      K +  M L 
Sbjct: 425 VLINGFCKVGNLNKAKEVMSKIYREGFVPNNVIFSTLIYNSCKVGNVYEGMKFYAAMNLN 484

Query: 398 NVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNA 457
               D  T N L+  LC+N  + EA +  H +           F+C+I+G    G    A
Sbjct: 485 GQNADNFTCNSLVASLCENGKLVEAEEFLHHISRIGLVPNSVTFDCIINGYANVGDGSGA 544

Query: 458 WELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHG 517
           + +F K+   G  P+  TY  ++  LC+     +A   L  +     A + +++NTL+  
Sbjct: 545 FSVFDKMISCGHHPSPFTYGSLLKVLCKGQNFWEARKLLKKLHCIPLAVDTISYNTLIVE 604

Query: 518 FLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEK 560
             ++    + V L  +M   + N++PD  T++ ++  L ++ +
Sbjct: 605 ISKSGNLLEAVRLFEEMI--QNNILPDSYTYTCILSGLIREGR 645



 Score =  141 bits (356), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 124/524 (23%), Positives = 230/524 (43%), Gaps = 24/524 (4%)

Query: 44  FLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVS 103
            ++ +CK G  N+ E   F+  M     +    + N L  ++ +N        F   +  
Sbjct: 461 LIYNSCKVG--NVYEGMKFYAAMNLNGQNADNFTCNSLVASLCENGKLVEAEEFLHHISR 518

Query: 104 IGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFC 163
           IGL+P+ +T + +IN + N   G         A  +F  MI+ G  P   TYG+L+   C
Sbjct: 519 IGLVPNSVTFDCIINGYANVGDG-------SGAFSVFDKMISCGHHPSPFTYGSLLKVLC 571

Query: 164 RTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRG 223
           +  N   A +L KK+      + +    +  SY+ +I  + K G + +A  LF EM    
Sbjct: 572 KGQNFWEARKLLKKL------HCIPLAVDTISYNTLIVEISKSGNLLEAVRLFEEMIQNN 625

Query: 224 INPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRP----NLLTFNVMIDCLCKGGKI 279
           I P     T ++ G    G    +   FI +  L  +     N + +   ID L K G+ 
Sbjct: 626 ILPDSYTYTCILSGLIREG---RLVCAFIFLGRLMQKEILTLNSIVYTCFIDGLFKAGQS 682

Query: 280 NEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNIL 339
             A  L + M ++GL+ D    NS+ DGY  +G++ +A  +     +K     + ++NIL
Sbjct: 683 KAALYLFKEMEEKGLSLDLIALNSITDGYSRMGKVFSASSLISKTRNKNVIPNLTTFNIL 742

Query: 340 INGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNV 399
           ++GY +  ++     LY  +  +G     +TY++L+ GL   G      K+       + 
Sbjct: 743 LHGYSRGQDIMSCFKLYNLMRRSGFFPNRLTYHSLILGLCNHGMLELGIKMLKMFIAESS 802

Query: 400 EPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWE 459
             D  T+N+LI   C+ N + + + L H +E+ +     +    + D L +     N + 
Sbjct: 803 TIDDLTFNMLIRKCCEINDLDKVIDLTHNMEVFRVSLDKDTQKAVTDVLVRRMVSQNYFV 862

Query: 460 LFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFL 519
             H++ +KG +PT   Y  M+  +CR G ++ A      M   G + +      ++ G  
Sbjct: 863 FMHEMLKKGFIPTSKQYCTMMKRMCRVGDIQGAFKLKDQMVALGISLDDAAECAMVRGLA 922

Query: 520 QNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
              K  + + +L +M   ++  +P  +TF+ ++ +  K + + E
Sbjct: 923 LCGKIEEAMWILQRMLRMKK--IPTTSTFTTLMHVFCKKDNFKE 964



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 123/586 (20%), Positives = 249/586 (42%), Gaps = 54/586 (9%)

Query: 10   LFSSETVSKVKLSSLFKSPRQIAAVS-----SPETQLNEFLHENCKSGIINLNEARYFFG 64
            +FS+   +  K+ ++++  +  AA++     +     N  +   C++G   L EA  F  
Sbjct: 457  IFSTLIYNSCKVGNVYEGMKFYAAMNLNGQNADNFTCNSLVASLCENG--KLVEAEEFLH 514

Query: 65   YMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKE 124
            +++ +   P   +F+ +    A         S + K++S G  P   T       +G+  
Sbjct: 515  HISRIGLVPNSVTFDCIINGYANVGDGSGAFSVFDKMISCGHHPSPFT-------YGSLL 567

Query: 125  RGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYE 184
            + LC      EA  L K +    +  D I+Y TLI    ++GNL  A+RL ++M+  +  
Sbjct: 568  KVLCKGQNFWEARKLLKKLHCIPLAVDTISYNTLIVEISKSGNLLEAVRLFEEMIQNNIL 627

Query: 185  ----------NGLISK--------------------TNIFSYSIIIDSLCKEGLVDKAKE 214
                      +GLI +                     N   Y+  ID L K G    A  
Sbjct: 628  PDSYTYTCILSGLIREGRLVCAFIFLGRLMQKEILTLNSIVYTCFIDGLFKAGQSKAALY 687

Query: 215  LFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLC 274
            LF EM+ +G++  ++   ++  G+   G     + L  +  +    PNL TFN+++    
Sbjct: 688  LFKEMEEKGLSLDLIALNSITDGYSRMGKVFSASSLISKTRNKNVIPNLTTFNILLHGYS 747

Query: 275  KGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVV 334
            +G  I     L  LM + G  P+R TY+SL+ G C  G ++   ++     ++      +
Sbjct: 748  RGQDIMSCFKLYNLMRRSGFFPNRLTYHSLILGLCNHGMLELGIKMLKMFIAESSTIDDL 807

Query: 335  SYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEM 394
            ++N+LI   C+I ++++ + L   +    V     T   +   L +   +        EM
Sbjct: 808  TFNMLIRKCCEINDLDKVIDLTHNMEVFRVSLDKDTQKAVTDVLVRRMVSQNYFVFMHEM 867

Query: 395  KLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNC----LIDGLCK 450
                  P    Y  ++  +C+   +Q A KL   +       GI + +     ++ GL  
Sbjct: 868  LKKGFIPTSKQYCTMMKRMCRVGDIQGAFKLKDQM----VALGISLDDAAECAMVRGLAL 923

Query: 451  AGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVT 510
             G+++ A  +  ++ +   +PT  T++ ++H  C+K   ++A++  + ME      ++V 
Sbjct: 924  CGKIEEAMWILQRMLRMKKIPTTSTFTTLMHVFCKKDNFKEAHNLKILMEHYRVKLDIVA 983

Query: 511  FNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLA 556
            +N L+     N      ++   ++   ++ L+P+ TT+ ++V  ++
Sbjct: 984  YNVLISACCANGDVITALDFYEEI--KQKGLLPNMTTYRVLVSAIS 1027



 Score =  121 bits (304), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 98/364 (26%), Positives = 166/364 (45%), Gaps = 41/364 (11%)

Query: 248 NGLFIEMLDLGP--RPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLM 305
           N LF  ++D  P    N   F+++I    + G +  A      M+ RG  P  +T N +M
Sbjct: 88  NFLFGVLMDTYPLCSSNPAVFDLLIRVYLRQGMVGHAVNTFSSMLIRGFKPSVYTCNMIM 147

Query: 306 DGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVR 365
                  R       F  M +      V S+NILI+  C    +++A+++   +  NG  
Sbjct: 148 ASMVKNCRAHLVWXFFKQMLTSRVCPNVSSFNILISVLCVQGKLKKAVNILTMMERNGYV 207

Query: 366 QTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKL 425
            T+++YNTLLS   + G+  +A  L   M+   ++ D+ TYN+ ID LC+N+   +   +
Sbjct: 208 PTIVSYNTLLSWCCKKGRFKFALVLIHHMECKGIQADVCTYNMFIDSLCRNSRSAQGYLV 267

Query: 426 FHMLEMNKFEFGIEI-FNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLC 484
              +  NK     E+ +N LI+G  K G++  A  +F+++ +  L P ++TY+I+I+G C
Sbjct: 268 LKKMR-NKMITPNEVSYNTLINGFVKEGKIGVATRVFNEMIELNLSPNLITYNILINGYC 326

Query: 485 RKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQN---------------NKTS---- 525
             G  E+A   L  ME N   PN VT  TL++G  ++               N+TS    
Sbjct: 327 INGNFEEALRLLDVMEANDVRPNEVTIGTLLNGLYKSAKFDVARNILERYSINRTSLNCI 386

Query: 526 ----------------KVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSK 569
                           +  +LL +M +    + PD  TFS++++   K    ++   V  
Sbjct: 387 SHTVMIDGLCRNGLLDEAFQLLIEMCKD--GVYPDIITFSVLINGFCKVGNLNKAKEVMS 444

Query: 570 SSYR 573
             YR
Sbjct: 445 KIYR 448



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 109/501 (21%), Positives = 191/501 (38%), Gaps = 114/501 (22%)

Query: 42   NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
            N  + E  KSG  NL EA   F  M      P   ++  +   + +         F  +L
Sbjct: 599  NTLIVEISKSG--NLLEAVRLFEEMIQNNILPDSYTYTCILSGLIREGRLVCAFIFLGRL 656

Query: 102  VSIGLLPDFLTLN-ILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLIN 160
            +      + LTLN I+  CF +   GL    + K A +LFK M   G+  D+I   ++ +
Sbjct: 657  MQ----KEILTLNSIVYTCFID---GLFKAGQSKAALYLFKEMEEKGLSLDLIALNSITD 709

Query: 161  GFCRTGNLSVALRLHKKMVSGDYENGLISKT-------NIFSYSIIIDSLCKEGLVDKAK 213
            G+ R G +  A             + LISKT       N+ +++I++    +   +    
Sbjct: 710  GYSRMGKVFSA-------------SSLISKTRNKNVIPNLTTFNILLHGYSRGQDIMSCF 756

Query: 214  ELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDL----GPRPNLLTFNVM 269
            +L+  M+  G  P  +   +LI G C  G  E    L I+ML +        + LTFN++
Sbjct: 757  KLYNLMRRSGFFPNRLTYHSLILGLCNHGMLE----LGIKMLKMFIAESSTIDDLTFNML 812

Query: 270  IDCLCKGGKINEANGLLEL--------------------------------------MIQ 291
            I   C+   IN+ + +++L                                      M++
Sbjct: 813  IRKCCE---INDLDKVIDLTHNMEVFRVSLDKDTQKAVTDVLVRRMVSQNYFVFMHEMLK 869

Query: 292  RGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEE 351
            +G  P    Y ++M   C VG I  A ++   M + G      +   ++ G      +EE
Sbjct: 870  KGFIPTSKQYCTMMKRMCRVGDIQGAFKLKDQMVALGISLDDAAECAMVRGLALCGKIEE 929

Query: 352  AMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILID 411
            AM + ++++      T  T+ TL+    +      A  L   M+ Y V+ D+  YN+LI 
Sbjct: 930  AMWILQRMLRMKKIPTTSTFTTLMHVFCKKDNFKEAHNLKILMEHYRVKLDIVAYNVLIS 989

Query: 412  GLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVP 471
              C N                                   G +  A + + ++ QKGL+P
Sbjct: 990  ACCAN-----------------------------------GDVITALDFYEEIKQKGLLP 1014

Query: 472  TVVTYSIMIHGLCRKGKLEKA 492
             + TY +++  +  K  + + 
Sbjct: 1015 NMTTYRVLVSAISTKHYVSRG 1035


>gi|356552005|ref|XP_003544362.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g09680-like [Glycine max]
          Length = 509

 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 118/371 (31%), Positives = 204/371 (54%), Gaps = 5/371 (1%)

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
           N F +++++   CK G V  A+ +F E+  RG+ P VV   TLI G C AG  EE   L 
Sbjct: 141 NFFFFNVLMHGFCKVGGVGSARLVFDEIPKRGLRPTVVSFNTLISGCCKAGAVEEGFRLK 200

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
             M      P++ TF+ +I+ LCK G+++E + L + M  +GL P+  T+  L+DG C  
Sbjct: 201 GVMESERVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGKGLVPNGVTFTVLIDGQCKG 260

Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
           G++D A + F  M ++G +  +V+YN LING CK+ +++EA  L  ++ ++G+R   IT+
Sbjct: 261 GKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMSASGLRPDRITF 320

Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
            TL+ G  + G    A ++   M    +E D   + +LI GLC++  V +A ++   +  
Sbjct: 321 TTLIDGCCKYGDMESALEIKRRMVEEGIELDDVAFTVLISGLCRDGRVHDAERMLRDMLS 380

Query: 432 NKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEK 491
             F+     +  ++D  CK G +   ++L  ++   G VP VVTY+ +++GLC++G+++ 
Sbjct: 381 AGFKPDDPTYTMVVDCFCKKGNVXMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQGQVKN 440

Query: 492 ANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIV 551
           A   L  M   G APN +T+N L+ G  ++  +  V      +   E+ LV D  +++ +
Sbjct: 441 AKMLLDAMLNVGVAPNDITYNILLEGHSKHGSSVDV-----DIFNSEKGLVKDYASYTAL 495

Query: 552 VDLLAKDEKYH 562
           V+  +K  K H
Sbjct: 496 VNESSKTSKDH 506



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 114/393 (29%), Positives = 209/393 (53%), Gaps = 13/393 (3%)

Query: 135 EATWLFK-NMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNI 193
           E +W F   ++  G  P+   +  L++GFC+ G +  A  +  ++     + GL  +  +
Sbjct: 124 ERSWAFYLEVLDSGYPPNFFFFNVLMHGFCKVGGVGSARLVFDEIP----KRGL--RPTV 177

Query: 194 FSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIE 253
            S++ +I   CK G V++   L   M+   + P V   + LI+G C  G  +E + LF E
Sbjct: 178 VSFNTLISGCCKAGAVEEGFRLKGVMESERVCPDVFTFSALINGLCKEGRLDEGSLLFDE 237

Query: 254 MLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGR 313
           M   G  PN +TF V+ID  CKGGK++ A    ++M+ +G+ PD  TYN+L++G C VG 
Sbjct: 238 MCGKGLVPNGVTFTVLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGD 297

Query: 314 IDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNT 373
           +  AR +   M + G +   +++  LI+G CK  ++E A+ + R+++  G+    + +  
Sbjct: 298 LKEARRLVNEMSASGLRPDRITFTTLIDGCCKYGDMESALEIKRRMVEEGIELDDVAFTV 357

Query: 374 LLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNK 433
           L+SGL + G+   A+++  +M     +PD  TY +++D  CK   V    KL   ++ + 
Sbjct: 358 LISGLCRDGRVHDAERMLRDMLSAGFKPDDPTYTMVVDCFCKKGNVXMGFKLLKEMQSDG 417

Query: 434 FEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKAN 493
              G+  +N L++GLCK G++ NA  L   +   G+ P  +TY+I++ G  + G    + 
Sbjct: 418 HVPGVVTYNALMNGLCKQGQVKNAKMLLDAMLNVGVAPNDITYNILLEGHSKHG---SSV 474

Query: 494 DFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSK 526
           D  ++  + G   +  ++  L++   +++KTSK
Sbjct: 475 DVDIFNSEKGLVKDYASYTALVN---ESSKTSK 504



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 132/416 (31%), Positives = 211/416 (50%), Gaps = 19/416 (4%)

Query: 68  HMQPSPPISSFNLLFGAVA-KNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERG 126
           H+ P P     NLL   V  +    +   +FY +++  G  P+F   N+L++       G
Sbjct: 99  HLFPVPVQGCENLLRRVVRLRPVELERSWAFYLEVLDSGYPPNFFFFNVLMH-------G 151

Query: 127 LCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENG 186
            C    +  A  +F  +   G+RP V+++ TLI+G C+ G +    RL   M S      
Sbjct: 152 FCKVGGVGSARLVFDEIPKRGLRPTVVSFNTLISGCCKAGAVEEGFRLKGVMESERV--- 208

Query: 187 LISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEE 246
                ++F++S +I+ LCKEG +D+   LF EM G+G+ P  V  T LI G C  G  + 
Sbjct: 209 ---CPDVFTFSALINGLCKEGRLDEGSLLFDEMCGKGLVPNGVTFTVLIDGQCKGGKVDL 265

Query: 247 VNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMD 306
               F  ML  G RP+L+T+N +I+ LCK G + EA  L+  M   GL PDR T+ +L+D
Sbjct: 266 ALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMSASGLRPDRITFTTLID 325

Query: 307 GYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQ 366
           G C  G +++A EI   M  +G +   V++ +LI+G C+   V +A  + R ++S G + 
Sbjct: 326 GCCKYGDMESALEIKRRMVEEGIELDDVAFTVLISGLCRDGRVHDAERMLRDMLSAGFKP 385

Query: 367 TVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLF 426
              TY  ++    + G      KL  EM+     P + TYN L++GLCK   V+ A  L 
Sbjct: 386 DDPTYTMVVDCFCKKGNVXMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQGQVKNAKMLL 445

Query: 427 H-MLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIH 481
             ML +      I  +N L++G  K G   +  ++F+   +KGLV    +Y+ +++
Sbjct: 446 DAMLNVGVAPNDI-TYNILLEGHSKHGSSVDV-DIFNS--EKGLVKDYASYTALVN 497



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 105/345 (30%), Positives = 179/345 (51%), Gaps = 2/345 (0%)

Query: 209 VDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNV 268
           ++++   +LE+   G  P       L+HGFC  G       +F E+   G RP +++FN 
Sbjct: 123 LERSWAFYLEVLDSGYPPNFFFFNVLMHGFCKVGGVGSARLVFDEIPKRGLRPTVVSFNT 182

Query: 269 MIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKG 328
           +I   CK G + E   L  +M    + PD FT+++L++G C  GR+D    +F  M  KG
Sbjct: 183 LISGCCKAGAVEEGFRLKGVMESERVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGKG 242

Query: 329 CKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQ 388
                V++ +LI+G CK   V+ A+  ++ +++ GVR  ++TYN L++GL + G    A+
Sbjct: 243 LVPNGVTFTVLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEAR 302

Query: 389 KLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGL 448
           +L +EM    + PD  T+  LIDG CK   ++ A+++   +     E     F  LI GL
Sbjct: 303 RLVNEMSASGLRPDRITFTTLIDGCCKYGDMESALEIKRRMVEEGIELDDVAFTVLISGL 362

Query: 449 CKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNV 508
           C+ GR+ +A  +   +   G  P   TY++++   C+KG +      L  M+ +G  P V
Sbjct: 363 CRDGRVHDAERMLRDMLSAGFKPDDPTYTMVVDCFCKKGNVXMGFKLLKEMQSDGHVPGV 422

Query: 509 VTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
           VT+N LM+G  +  +      LL  M      + P+D T++I+++
Sbjct: 423 VTYNALMNGLCKQGQVKNAKMLLDAMLNV--GVAPNDITYNILLE 465



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 110/371 (29%), Positives = 176/371 (47%), Gaps = 18/371 (4%)

Query: 41  LNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRK 100
            N  +H  CK G   +  AR  F  +      P + SFN L     K    +        
Sbjct: 145 FNVLMHGFCKVG--GVGSARLVFDEIPKRGLRPTVVSFNTLISGCCKAGAVEEGFRLKGV 202

Query: 101 LVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLIN 160
           + S  + PD  T + LIN       GLC E R+ E + LF  M   G+ P+ +T+  LI+
Sbjct: 203 MESERVCPDVFTFSALIN-------GLCKEGRLDEGSLLFDEMCGKGLVPNGVTFTVLID 255

Query: 161 GFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMK 220
           G C+ G + +AL+  + M++         + ++ +Y+ +I+ LCK G + +A+ L  EM 
Sbjct: 256 GQCKGGKVDLALKNFQMMLAQGV------RPDLVTYNALINGLCKVGDLKEARRLVNEMS 309

Query: 221 GRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKIN 280
             G+ P  +  TTLI G C  G+ E    +   M++ G   + + F V+I  LC+ G+++
Sbjct: 310 ASGLRPDRITFTTLIDGCCKYGDMESALEIKRRMVEEGIELDDVAFTVLISGLCRDGRVH 369

Query: 281 EANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILI 340
           +A  +L  M+  G  PD  TY  ++D +C  G +    ++   M S G    VV+YN L+
Sbjct: 370 DAERMLRDMLSAGFKPDDPTYTMVVDCFCKKGNVXMGFKLLKEMQSDGHVPGVVTYNALM 429

Query: 341 NGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVE 400
           NG CK   V+ A  L   +++ GV    ITYN LL G  + G +        E  L    
Sbjct: 430 NGLCKQGQVKNAKMLLDAMLNVGVAPNDITYNILLEGHSKHGSSVDVDIFNSEKGLVK-- 487

Query: 401 PDLSTYNILID 411
            D ++Y  L++
Sbjct: 488 -DYASYTALVN 497



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 65/209 (31%), Positives = 115/209 (55%), Gaps = 2/209 (0%)

Query: 345 KILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLS 404
           + + +E + + Y +++ +G       +N L+ G  + G  G A+ +FDE+    + P + 
Sbjct: 119 RPVELERSWAFYLEVLDSGYPPNFFFFNVLMHGFCKVGGVGSARLVFDEIPKRGLRPTVV 178

Query: 405 TYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKL 464
           ++N LI G CK   V+E  +L  ++E  +    +  F+ LI+GLCK GRLD    LF ++
Sbjct: 179 SFNTLISGCCKAGAVEEGFRLKGVMESERVCPDVFTFSALINGLCKEGRLDEGSLLFDEM 238

Query: 465 PQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKT 524
             KGLVP  VT++++I G C+ GK++ A      M   G  P++VT+N L++G  +    
Sbjct: 239 CGKGLVPNGVTFTVLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDL 298

Query: 525 SKVVELLHKMAEPERNLVPDDTTFSIVVD 553
            +   L+++M+     L PD  TF+ ++D
Sbjct: 299 KEARRLVNEMS--ASGLRPDRITFTTLID 325


>gi|356513749|ref|XP_003525573.1| PREDICTED: pentatricopeptide repeat-containing protein At2g26790,
           mitochondrial-like [Glycine max]
          Length = 819

 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 127/516 (24%), Positives = 244/516 (47%), Gaps = 54/516 (10%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
           P + + N LF  + ++   D  ++ Y +L   G +P+  T  I+I       + LC +  
Sbjct: 193 PDVLTCNFLFNRLVEHGEVDKALAVYEQLKRFGFIPNCYTYAIVI-------KALCKKGD 245

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
           +K+   +F+ M   GV P    +   I G C      +   + +    G+      +   
Sbjct: 246 LKQPLCVFEEMERVGVIPHSYCFAAYIEGLCNNHRSDLGYEVLQAFRKGN------APLE 299

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
           +++Y+ ++   C E  +D+A+ +F +M+ +G+ P V V ++LIHG+C + N      L  
Sbjct: 300 VYAYTAVVRGFCNEMKLDEAQGVFDDMERQGVVPDVYVYSSLIHGYCKSHNLLRALALHD 359

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
           EM+  G + N +  + ++ CL + G   E     + + + G+  D   YN + D  C++G
Sbjct: 360 EMISRGVKTNCVVVSCILHCLGEMGMTLEVVDQFKELKESGMFLDGVAYNIVFDALCMLG 419

Query: 313 RIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYN 372
           +++ A E+   M SK     V  Y  LINGYC   ++  A ++++++   G++  ++TYN
Sbjct: 420 KVEDAVEMVEEMKSKRLGLDVKHYTTLINGYCLQGDLVTAFNMFKEMKEKGLKPDIVTYN 479

Query: 373 TLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMN 432
            L +GL + G A    KL D M+   ++P+ +T+ ++I+GLC    V EA   F+ LE  
Sbjct: 480 VLAAGLSRNGHARETVKLLDFMESQGMKPNSTTHKMIIEGLCSGGKVLEAEVYFNSLE-- 537

Query: 433 KFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKG------------------------ 468
             +  IEI++ +++G C+   +  ++E+F KL  +G                        
Sbjct: 538 --DKNIEIYSAMVNGYCETDLVKKSYEVFLKLLNQGDMAKKASCFKLLSKLCMTGDIEKA 595

Query: 469 -----------LVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHG 517
                      + P+ + YS ++  LC+ G ++ A          G  P+VVT+  +++ 
Sbjct: 596 VKLLDRMLLSNVEPSKIMYSKILAALCQAGDMKNARTLFDVFVHRGFTPDVVTYTIMINS 655

Query: 518 FLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
           + + N   +  +L   M    R + PD  TF++++D
Sbjct: 656 YCRMNCLQEAHDLFQDMK--RRGIKPDVITFTVLLD 689



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 134/497 (26%), Positives = 229/497 (46%), Gaps = 83/497 (16%)

Query: 125 RGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYE 184
           RG C E ++ EA  +F +M   GV PDV  Y +LI+G+C++ NL  AL LH +M+S   +
Sbjct: 308 RGFCNEMKLDEAQGVFDDMERQGVVPDVYVYSSLIHGYCKSHNLLRALALHDEMISRGVK 367

Query: 185 NGLISKTNIF-----------------------------SYSIIIDSLCKEGLVDKAKEL 215
              +  + I                              +Y+I+ D+LC  G V+ A E+
Sbjct: 368 TNCVVVSCILHCLGEMGMTLEVVDQFKELKESGMFLDGVAYNIVFDALCMLGKVEDAVEM 427

Query: 216 FLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCK 275
             EMK + +   V   TTLI+G+C  G+      +F EM + G +P+++T+NV+   L +
Sbjct: 428 VEEMKSKRLGLDVKHYTTLINGYCLQGDLVTAFNMFKEMKEKGLKPDIVTYNVLAAGLSR 487

Query: 276 GGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVS 335
            G   E   LL+ M  +G+ P+  T+  +++G C  G++  A   F S+  K     +  
Sbjct: 488 NGHARETVKLLDFMESQGMKPNSTTHKMIIEGLCSGGKVLEAEVYFNSLEDKN----IEI 543

Query: 336 YNILINGYC-------------KILN----------------------VEEAMSLYRQII 360
           Y+ ++NGYC             K+LN                      +E+A+ L  +++
Sbjct: 544 YSAMVNGYCETDLVKKSYEVFLKLLNQGDMAKKASCFKLLSKLCMTGDIEKAVKLLDRML 603

Query: 361 SNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQ 420
            + V  + I Y+ +L+ L QAG    A+ LFD        PD+ TY I+I+  C+ NC+Q
Sbjct: 604 LSNVEPSKIMYSKILAALCQAGDMKNARTLFDVFVHRGFTPDVVTYTIMINSYCRMNCLQ 663

Query: 421 EAVKLFHMLEMNKFEFGIEIFNCLIDGLCK---AGRLDNAWE----------LFHKLPQK 467
           EA  LF  ++    +  +  F  L+DG  K     R  +  +          +   + Q 
Sbjct: 664 EAHDLFQDMKRRGIKPDVITFTVLLDGSLKEYLGKRFSSHGKRKTTSLYVSTILRDMEQM 723

Query: 468 GLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKV 527
            + P VV Y++++ G  +    ++A      M ++G  P+ +T+  L+ G        K 
Sbjct: 724 KINPDVVCYTVLMDGHMKTDNFQQAVSLFDKMIESGLEPDTITYTALVSGLCNRGHVEKA 783

Query: 528 VELLHKMAEPERNLVPD 544
           V LL++M+   + + PD
Sbjct: 784 VTLLNEMS--SKGMTPD 798



 Score =  158 bits (400), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 119/509 (23%), Positives = 223/509 (43%), Gaps = 78/509 (15%)

Query: 54  INLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTL 113
           + L+EA+  F  M      P +  ++ L     K+ +    ++ + +++S G+  + + +
Sbjct: 314 MKLDEAQGVFDDMERQGVVPDVYVYSSLIHGYCKSHNLLRALALHDEMISRGVKTNCVVV 373

Query: 114 NILINCFGN--------------KERG--------------LCVENRIKEATWLFKNMIA 145
           + +++C G               KE G              LC+  ++++A  + + M +
Sbjct: 374 SCILHCLGEMGMTLEVVDQFKELKESGMFLDGVAYNIVFDALCMLGKVEDAVEMVEEMKS 433

Query: 146 FGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCK 205
             +  DV  Y TLING+C  G+L  A  + K+M     E GL  K +I +Y+++   L +
Sbjct: 434 KRLGLDVKHYTTLINGYCLQGDLVTAFNMFKEM----KEKGL--KPDIVTYNVLAAGLSR 487

Query: 206 EGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEE------------------- 246
            G   +  +L   M+ +G+ P       +I G C  G   E                   
Sbjct: 488 NGHARETVKLLDFMESQGMKPNSTTHKMIIEGLCSGGKVLEAEVYFNSLEDKNIEIYSAM 547

Query: 247 VNG------------LFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGL 294
           VNG            +F+++L+ G      +   ++  LC  G I +A  LL+ M+   +
Sbjct: 548 VNGYCETDLVKKSYEVFLKLLNQGDMAKKASCFKLLSKLCMTGDIEKAVKLLDRMLLSNV 607

Query: 295 NPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMS 354
            P +  Y+ ++   C  G +  AR +F     +G    VV+Y I+IN YC++  ++EA  
Sbjct: 608 EPSKIMYSKILAALCQAGDMKNARTLFDVFVHRGFTPDVVTYTIMINSYCRMNCLQEAHD 667

Query: 355 LYRQIISNGVRQTVITYNTLLSGLFQ-------------AGQAGYAQKLFDEMKLYNVEP 401
           L++ +   G++  VIT+  LL G  +                + Y   +  +M+   + P
Sbjct: 668 LFQDMKRRGIKPDVITFTVLLDGSLKEYLGKRFSSHGKRKTTSLYVSTILRDMEQMKINP 727

Query: 402 DLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELF 461
           D+  Y +L+DG  K +  Q+AV LF  +  +  E     +  L+ GLC  G ++ A  L 
Sbjct: 728 DVVCYTVLMDGHMKTDNFQQAVSLFDKMIESGLEPDTITYTALVSGLCNRGHVEKAVTLL 787

Query: 462 HKLPQKGLVPTVVTYSIMIHGLCRKGKLE 490
           +++  KG+ P V   S +  G+ +  K++
Sbjct: 788 NEMSSKGMTPDVHIISALKRGIIKARKVQ 816



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 97/367 (26%), Positives = 180/367 (49%), Gaps = 8/367 (2%)

Query: 160 NGFCRTGNLSVALRLHKKMVSGDYEN---GLISKTNIFSYSIIIDSLCKEGLVDKAKELF 216
           NGF +T    V+L +  K +   ++    G++   ++ + + + + L + G VDKA  ++
Sbjct: 164 NGFVKT---CVSLNMFDKAIDFLFQTRRRGILP--DVLTCNFLFNRLVEHGEVDKALAVY 218

Query: 217 LEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKG 276
            ++K  G  P       +I   C  G+ ++   +F EM  +G  P+   F   I+ LC  
Sbjct: 219 EQLKRFGFIPNCYTYAIVIKALCKKGDLKQPLCVFEEMERVGVIPHSYCFAAYIEGLCNN 278

Query: 277 GKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSY 336
            + +    +L+   +     + + Y +++ G+C   ++D A+ +F  M  +G    V  Y
Sbjct: 279 HRSDLGYEVLQAFRKGNAPLEVYAYTAVVRGFCNEMKLDEAQGVFDDMERQGVVPDVYVY 338

Query: 337 NILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKL 396
           + LI+GYCK  N+  A++L+ ++IS GV+   +  + +L  L + G        F E+K 
Sbjct: 339 SSLIHGYCKSHNLLRALALHDEMISRGVKTNCVVVSCILHCLGEMGMTLEVVDQFKELKE 398

Query: 397 YNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDN 456
             +  D   YNI+ D LC    V++AV++   ++  +    ++ +  LI+G C  G L  
Sbjct: 399 SGMFLDGVAYNIVFDALCMLGKVEDAVEMVEEMKSKRLGLDVKHYTTLINGYCLQGDLVT 458

Query: 457 AWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMH 516
           A+ +F ++ +KGL P +VTY+++  GL R G   +    L +ME  G  PN  T   ++ 
Sbjct: 459 AFNMFKEMKEKGLKPDIVTYNVLAAGLSRNGHARETVKLLDFMESQGMKPNSTTHKMIIE 518

Query: 517 GFLQNNK 523
           G     K
Sbjct: 519 GLCSGGK 525



 Score =  135 bits (339), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 85/346 (24%), Positives = 164/346 (47%), Gaps = 2/346 (0%)

Query: 208 LVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFN 267
           + DKA +   + + RGI P V+ C  L +     G  ++   ++ ++   G  PN  T+ 
Sbjct: 175 MFDKAIDFLFQTRRRGILPDVLTCNFLFNRLVEHGEVDKALAVYEQLKRFGFIPNCYTYA 234

Query: 268 VMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSK 327
           ++I  LCK G + +   + E M + G+ P  + + + ++G C   R D   E+  +    
Sbjct: 235 IVIKALCKKGDLKQPLCVFEEMERVGVIPHSYCFAAYIEGLCNNHRSDLGYEVLQAFRKG 294

Query: 328 GCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYA 387
                V +Y  ++ G+C  + ++EA  ++  +   GV   V  Y++L+ G  ++     A
Sbjct: 295 NAPLEVYAYTAVVRGFCNEMKLDEAQGVFDDMERQGVVPDVYVYSSLIHGYCKSHNLLRA 354

Query: 388 QKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDG 447
             L DEM    V+ +    + ++  L +     E V  F  L+ +        +N + D 
Sbjct: 355 LALHDEMISRGVKTNCVVVSCILHCLGEMGMTLEVVDQFKELKESGMFLDGVAYNIVFDA 414

Query: 448 LCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPN 507
           LC  G++++A E+  ++  K L   V  Y+ +I+G C +G L  A +    M++ G  P+
Sbjct: 415 LCMLGKVEDAVEMVEEMKSKRLGLDVKHYTTLINGYCLQGDLVTAFNMFKEMKEKGLKPD 474

Query: 508 VVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
           +VT+N L  G  +N    + V+LL  M    + + P+ TT  ++++
Sbjct: 475 IVTYNVLAAGLSRNGHARETVKLLDFME--SQGMKPNSTTHKMIIE 518


>gi|255544732|ref|XP_002513427.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223547335|gb|EEF48830.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 567

 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 137/500 (27%), Positives = 246/500 (49%), Gaps = 22/500 (4%)

Query: 67  THMQPSPPISSFNLLFGAVAKN--RHYDAVIS--FY--RKLVSIGLLPDFLTLNILINCF 120
           T +  SP  S   L      KN  R+ D  IS  F+    +V  G  PD +    L+   
Sbjct: 48  TQITISPKDSVITLPNWRSGKNDQRNRDMRISDAFFHLEHIVKNGHKPDVVQATQLL--- 104

Query: 121 GNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVS 180
                 LC  N++K+A  + + MI+ G+ PD  +Y  L+N  C+ GN+  A++L +KM  
Sbjct: 105 ----YDLCKSNKMKKAIRVMEMMISCGIIPDAASYTFLVNHLCKRGNVGYAMQLVEKMED 160

Query: 181 GDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCC 240
             Y        N  +Y+ ++  LC  G ++K+ +    +  +G+ P     ++L+     
Sbjct: 161 SGY------PANTVTYNTLVKGLCMHGNLNKSLQFLDRLMQKGLVPNAFTYSSLLEAAYK 214

Query: 241 AGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFT 300
                E   L  E++  G +PNL+++NV++  LCK G+I EA  L + +  +G +P+  +
Sbjct: 215 ERGVNEAMRLLDEIIAKGGQPNLVSYNVLLTGLCKEGRIEEAIRLFKNLPSKGFSPNVVS 274

Query: 301 YNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQII 360
           YN L+   C  GR + A E+   M+ +    ++V+YNILI        +E+A+ +  +++
Sbjct: 275 YNILLRSLCYEGRWEEANELLAEMNGRERSPSIVTYNILIGSLAFHGKIEQALQVIDEMM 334

Query: 361 SNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQ 420
               + T  +YN +++ L + G+        D+M      P+  T+N  I  LC    VQ
Sbjct: 335 MGPFKPTATSYNPIIARLCKEGKVEAVVNCLDQMIFGRCSPNEGTFNA-IAVLCYEGKVQ 393

Query: 421 EAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMI 480
           EA  L   L   +     + +  ++  LCK G    A+ L +++ + G  P   TYS +I
Sbjct: 394 EAFSLIQSLGNKQNSSIHDYYKGVVSCLCKKGNTYPAFLLLYEMTKYGFTPDSYTYSSLI 453

Query: 481 HGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERN 540
            GLC +G L +A +    +E++   P++  FN L+ GF ++++T   +E+   M   E+ 
Sbjct: 454 RGLCIEGMLYEAMEIFKLLEEDHYRPDIDNFNALILGFCKSHRTDLSLEVFEMMI--EKG 511

Query: 541 LVPDDTTFSIVVDLLAKDEK 560
             P +TT++I+V+ +  +E+
Sbjct: 512 YTPSETTYTILVEGIIHEEE 531



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 122/457 (26%), Positives = 216/457 (47%), Gaps = 16/457 (3%)

Query: 40  QLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYR 99
           Q  + L++ CKS    + +A      M      P  +S+  L   + K  +    +    
Sbjct: 99  QATQLLYDLCKSN--KMKKAIRVMEMMISCGIIPDAASYTFLVNHLCKRGNVGYAMQLVE 156

Query: 100 KLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLI 159
           K+   G   + +T N L+       +GLC+   + ++      ++  G+ P+  TY +L+
Sbjct: 157 KMEDSGYPANTVTYNTLV-------KGLCMHGNLNKSLQFLDRLMQKGLVPNAFTYSSLL 209

Query: 160 NGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEM 219
               +   ++ A+RL  ++++         + N+ SY++++  LCKEG +++A  LF  +
Sbjct: 210 EAAYKERGVNEAMRLLDEIIAKG------GQPNLVSYNVLLTGLCKEGRIEEAIRLFKNL 263

Query: 220 KGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKI 279
             +G +P VV    L+   C  G WEE N L  EM      P+++T+N++I  L   GKI
Sbjct: 264 PSKGFSPNVVSYNILLRSLCYEGRWEEANELLAEMNGRERSPSIVTYNILIGSLAFHGKI 323

Query: 280 NEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNIL 339
            +A  +++ M+     P   +YN ++   C  G+++        M    C     ++N  
Sbjct: 324 EQALQVIDEMMMGPFKPTATSYNPIIARLCKEGKVEAVVNCLDQMIFGRCSPNEGTFNA- 382

Query: 340 INGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNV 399
           I   C    V+EA SL + + +         Y  ++S L + G    A  L  EM  Y  
Sbjct: 383 IAVLCYEGKVQEAFSLIQSLGNKQNSSIHDYYKGVVSCLCKKGNTYPAFLLLYEMTKYGF 442

Query: 400 EPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWE 459
            PD  TY+ LI GLC    + EA+++F +LE + +   I+ FN LI G CK+ R D + E
Sbjct: 443 TPDSYTYSSLIRGLCIEGMLYEAMEIFKLLEEDHYRPDIDNFNALILGFCKSHRTDLSLE 502

Query: 460 LFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFL 496
           +F  + +KG  P+  TY+I++ G+  + + E A + L
Sbjct: 503 VFEMMIEKGYTPSETTYTILVEGIIHEEEKELAAEVL 539



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 98/379 (25%), Positives = 162/379 (42%), Gaps = 47/379 (12%)

Query: 55  NLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLN 114
           NLN++  F   +      P   +++ L  A  K R  +  +    ++++ G  P+ ++ N
Sbjct: 182 NLNKSLQFLDRLMQKGLVPNAFTYSSLLEAAYKERGVNEAMRLLDEIIAKGGQPNLVSYN 241

Query: 115 ILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRL 174
           +L+        GLC E RI+EA  LFKN+ + G  P+V++Y  L+   C  G    A  L
Sbjct: 242 VLLT-------GLCKEGRIEEAIRLFKNLPSKGFSPNVVSYNILLRSLCYEGRWEEANEL 294

Query: 175 HKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTL 234
             +M      NG     +I +Y+I+I SL   G +++A ++  EM      P       +
Sbjct: 295 LAEM------NGRERSPSIVTYNILIGSLAFHGKIEQALQVIDEMMMGPFKPTATSYNPI 348

Query: 235 IHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVM------------------------- 269
           I   C  G  E V     +M+     PN  TFN +                         
Sbjct: 349 IARLCKEGKVEAVVNCLDQMIFGRCSPNEGTFNAIAVLCYEGKVQEAFSLIQSLGNKQNS 408

Query: 270 ---------IDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREI 320
                    + CLCK G    A  LL  M + G  PD +TY+SL+ G C+ G +  A EI
Sbjct: 409 SIHDYYKGVVSCLCKKGNTYPAFLLLYEMTKYGFTPDSYTYSSLIRGLCIEGMLYEAMEI 468

Query: 321 FLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQ 380
           F  +     +  + ++N LI G+CK    + ++ ++  +I  G   +  TY  L+ G+  
Sbjct: 469 FKLLEEDHYRPDIDNFNALILGFCKSHRTDLSLEVFEMMIEKGYTPSETTYTILVEGIIH 528

Query: 381 AGQAGYAQKLFDEMKLYNV 399
             +   A ++  E+ L  V
Sbjct: 529 EEEKELAAEVLRELHLRQV 547



 Score =  129 bits (323), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 98/393 (24%), Positives = 180/393 (45%), Gaps = 51/393 (12%)

Query: 77  SFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEA 136
           ++N L   +  + + +  + F  +L+  GL+P+  T + L+     KERG      + EA
Sbjct: 169 TYNTLVKGLCMHGNLNKSLQFLDRLMQKGLVPNAFTYSSLLEA-AYKERG------VNEA 221

Query: 137 TWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSY 196
             L   +IA G +P++++Y  L+ G C+ G +  A+RL K + S  +        N+ SY
Sbjct: 222 MRLLDEIIAKGGQPNLVSYNVLLTGLCKEGRIEEAIRLFKNLPSKGF------SPNVVSY 275

Query: 197 SIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLD 256
           +I++ SLC EG  ++A EL  EM GR  +P++V    LI      G  E+   +  EM+ 
Sbjct: 276 NILLRSLCYEGRWEEANELLAEMNGRERSPSIVTYNILIGSLAFHGKIEQALQVIDEMM- 334

Query: 257 LGP-RPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRID 315
           +GP +P   ++N +I  LCK GK+      L+ MI    +P+  T+N++    C  G++ 
Sbjct: 335 MGPFKPTATSYNPIIARLCKEGKVEAVVNCLDQMIFGRCSPNEGTFNAIA-VLCYEGKVQ 393

Query: 316 TAREIFLSMHSK-----------------------------------GCKHTVVSYNILI 340
            A  +  S+ +K                                   G      +Y+ LI
Sbjct: 394 EAFSLIQSLGNKQNSSIHDYYKGVVSCLCKKGNTYPAFLLLYEMTKYGFTPDSYTYSSLI 453

Query: 341 NGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVE 400
            G C    + EAM +++ +  +  R  +  +N L+ G  ++ +   + ++F+ M      
Sbjct: 454 RGLCIEGMLYEAMEIFKLLEEDHYRPDIDNFNALILGFCKSHRTDLSLEVFEMMIEKGYT 513

Query: 401 PDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNK 433
           P  +TY IL++G+      + A ++   L + +
Sbjct: 514 PSETTYTILVEGIIHEEEKELAAEVLRELHLRQ 546



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 53/221 (23%), Positives = 109/221 (49%), Gaps = 2/221 (0%)

Query: 347 LNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTY 406
           + + +A      I+ NG +  V+    LL  L ++ +   A ++ + M    + PD ++Y
Sbjct: 76  MRISDAFFHLEHIVKNGHKPDVVQATQLLYDLCKSNKMKKAIRVMEMMISCGIIPDAASY 135

Query: 407 NILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQ 466
             L++ LCK   V  A++L   +E + +      +N L+ GLC  G L+ + +   +L Q
Sbjct: 136 TFLVNHLCKRGNVGYAMQLVEKMEDSGYPANTVTYNTLVKGLCMHGNLNKSLQFLDRLMQ 195

Query: 467 KGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSK 526
           KGLVP   TYS ++    ++  + +A   L  +   G  PN+V++N L+ G  +  +  +
Sbjct: 196 KGLVPNAFTYSSLLEAAYKERGVNEAMRLLDEIIAKGGQPNLVSYNVLLTGLCKEGRIEE 255

Query: 527 VVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAV 567
            + L   +  P +   P+  +++I++  L  + ++ E + +
Sbjct: 256 AIRLFKNL--PSKGFSPNVVSYNILLRSLCYEGRWEEANEL 294


>gi|218200855|gb|EEC83282.1| hypothetical protein OsI_28637 [Oryza sativa Indica Group]
          Length = 662

 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 139/558 (24%), Positives = 247/558 (44%), Gaps = 69/558 (12%)

Query: 29  RQIAAVSSPETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKN 88
           R+   V+  E      +   CK+G ++         +   +QP+  + ++N+L  A+ K+
Sbjct: 2   RESRNVALNEYSYTAMIKALCKAGKVDAGFEMLAELWRAGLQPT--VVTYNVLMDALCKS 59

Query: 89  RHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGV 148
              +       ++   G+ P  +T  ILIN       GL    R  E   + + M   GV
Sbjct: 60  GRVEEAFRLKGRMEQGGMTPSVVTFGILIN-------GLARGERFGEVGIVLQEMEQLGV 112

Query: 149 RPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGL 208
            P+ + Y  LI   CR G+ S ALRL  +MV          K    +Y++I  +LCKEG 
Sbjct: 113 SPNEVIYNELIGWHCRKGHCSQALRLFDEMVLKKM------KPTAVTYNLIAKALCKEGE 166

Query: 209 VDKAKELFL------------------------------------EMKGRGINPAVVVCT 232
           +++A+ +                                      EM  RG+ P   + T
Sbjct: 167 MERAERILEDMLSIGMTVHCGLFNTVVAWLLQRTRRLESVVSITNEMVTRGMRPNDPLMT 226

Query: 233 TLIHGFCCAGNWEEVNGLFIE-----------------MLDLGPRPNLLTFNVMIDCLCK 275
             +   C  G  +E  G++ +                 ML+ G   + +T+N+MI   CK
Sbjct: 227 ACMRELCKGGKHQEAVGIWFKTLNKGKYMKEATKVIQTMLNKGIELDSITYNIMIRGCCK 286

Query: 276 GGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVS 335
             K+ EA  L   M +RG  PD FT+N+L+  YC +G+++    +   M ++G +  +VS
Sbjct: 287 DSKMEEAIKLHGDMTRRGFKPDLFTFNTLLHAYCNLGKMEETFHLLDQMKTEGLQPDIVS 346

Query: 336 YNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMK 395
           Y  +I+G+CK  ++ +A     +++  G++  V  YN L+ G  + G    A    + MK
Sbjct: 347 YGTIIDGHCKAKDIRKAKEYLTELMDRGLKPNVFIYNALIGGYGRNGDISGAIDAVETMK 406

Query: 396 LYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLD 455
              ++P   TY  L+  +C    V+EA  +F     N  + G+  +  +I G CK G++ 
Sbjct: 407 SNGIQPTNVTYGSLMYWMCHAGLVEEAKTIFSQARENNVDLGVIGYTIMIQGYCKLGKMV 466

Query: 456 NAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLM 515
            A   F ++  +G+ P  +TY+ +++   + G  E+A+     M  +G  P+ +T+ TL+
Sbjct: 467 EAVAYFEEMRSRGISPNKLTYTTLMYAYSKSGNSEEASKLFDEMVGSGVIPDNITYGTLI 526

Query: 516 HGFLQN-NKTSKVVELLH 532
               +   KT++  + LH
Sbjct: 527 ARCSEKGGKTTQYGQELH 544


>gi|449433055|ref|XP_004134313.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g18950-like [Cucumis sativus]
          Length = 602

 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 139/495 (28%), Positives = 231/495 (46%), Gaps = 26/495 (5%)

Query: 60  RYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINC 119
           R+F    +  +  P   S N LF A+ + +      SF   L S    P+  +L   I C
Sbjct: 108 RFFLWLSSQPEFLPHPVSCNKLFDALLEAKACVPAKSF---LYSFEFSPEPASLENYIRC 164

Query: 120 FGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMV 179
                  +C    ++EA + F  +   G RP V T+        + G   +  +L++ M+
Sbjct: 165 -------VCEGGLVEEAVYTFDMLKEAGYRPYVETWNFAFQSCLKFGRTDLIWKLYEGMM 217

Query: 180 SGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFC 239
               E G+    +I +   +I + C +  V +A E+  +    G+ P       LI GFC
Sbjct: 218 ----ETGVQKDVDIETVGYLIQAFCNDNKVSRAYEILRQSLEDGLTPCNDAFNKLISGFC 273

Query: 240 CAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRF 299
              N   V  L   M+     P++ T+  +I+  CK     +A  +   +  RG  PD  
Sbjct: 274 KEKNHHRVLELVHTMIVKNRNPDIFTYQEIINGFCKNWMTLQAFEVFNALKDRGYAPDMV 333

Query: 300 TYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQI 359
            Y +L+ G+C +G+++ A +++  M  KG      SYN LI G+CKI N++EAM LY+++
Sbjct: 334 MYTTLIHGFCKMGQLEDASKLWFEMIDKGFLPNEYSYNTLIYGFCKIGNLDEAMKLYKKM 393

Query: 360 ISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCV 419
           + +G ++T ++ NTL+ GL   G+   A   F EM   N+  D+ TYN LI G C+   V
Sbjct: 394 LDSGYKETTLSCNTLILGLCLHGRTDEAYDFFREMPCKNIVCDVITYNTLIQGFCREGKV 453

Query: 420 QEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIM 479
            ++  L   L+    +     +  LI  LC+ G +  A E+++ +  +GL P V T   +
Sbjct: 454 LQSTDLLKELQAKGLQPSTSSYAHLIQKLCQLGSVQEAKEMWNDMHNRGLQPMVCTRDHI 513

Query: 480 IHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQ-----------NNKTSKVV 528
           I GLC +G + +  ++L+ M K+   P   TF  L+   +Q           ++KTSK V
Sbjct: 514 ISGLCEQGYVVEGMEWLITMLKSNLKPQKETFYKLIQSLIQIGKELLLELKMDSKTSKEV 573

Query: 529 ELLHKMAEPERNLVP 543
             L  M +   N +P
Sbjct: 574 YPL-AMTKSSSNFLP 587



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 52/205 (25%), Positives = 87/205 (42%), Gaps = 15/205 (7%)

Query: 38  ETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISF 97
           E   N  ++  CK G  NL+EA   +  M          S N L   +  +   D    F
Sbjct: 367 EYSYNTLIYGFCKIG--NLDEAMKLYKKMLDSGYKETTLSCNTLILGLCLHGRTDEAYDF 424

Query: 98  YRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGT 157
           +R++    ++ D +T N LI       +G C E ++ ++T L K + A G++P   +Y  
Sbjct: 425 FREMPCKNIVCDVITYNTLI-------QGFCREGKVLQSTDLLKELQAKGLQPSTSSYAH 477

Query: 158 LINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFL 217
           LI   C+ G++  A    K+M +  +  GL  +  + +   II  LC++G V +  E  +
Sbjct: 478 LIQKLCQLGSVQEA----KEMWNDMHNRGL--QPMVCTRDHIISGLCEQGYVVEGMEWLI 531

Query: 218 EMKGRGINPAVVVCTTLIHGFCCAG 242
            M    + P       LI      G
Sbjct: 532 TMLKSNLKPQKETFYKLIQSLIQIG 556


>gi|297817780|ref|XP_002876773.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297322611|gb|EFH53032.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 559

 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 136/536 (25%), Positives = 247/536 (46%), Gaps = 33/536 (6%)

Query: 29  RQIAAVSSPET---QLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAV 85
           R+ + +  P T    +++ ++ NC  G ++L     F  Y+     +P  SSFN +   V
Sbjct: 13  RKSSNLPDPVTCNKHIHQLINSNC--GALSLK----FLAYLVSRGYAPHRSSFNSVVSFV 66

Query: 86  AKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIA 145
            K       +     +   G  PD ++ N LI+       G C    I+ A  + +++ A
Sbjct: 67  CKLGQVKFAVDIVHSMPRFGCEPDVISYNSLID-------GHCRNGDIRSACLVLESLRA 119

Query: 146 ---FGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDS 202
              F  +PD++++ TL NGF +   L         M+            N+ +YS  ID 
Sbjct: 120 SYGFTCKPDIVSFNTLFNGFSKMKMLDEVFVYMGVMLK-------CCSPNVVTYSTWIDM 172

Query: 203 LCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPN 262
            CK G +  A + F  MK   + P VV  T LI G+C AG+ E V  L+ EM  +    N
Sbjct: 173 FCKSGELKLALKSFNCMKRDALFPNVVTFTCLIDGYCKAGDLEVVVSLYEEMRRVRMSLN 232

Query: 263 LLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFL 322
           ++T+  +ID  CK G++  A G+   M++  + P+   Y ++++G+   G  D A +   
Sbjct: 233 VVTYTALIDGFCKKGEMQRAGGMYLRMLEDRVEPNSLVYTTIINGFFQRGDSDNAMKFLA 292

Query: 323 SMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAG 382
            M ++G +  + +Y ++I+G C I  ++EA  +   +    +   ++ + T+++  F++G
Sbjct: 293 KMLNQGMRLDITAYGVIISGLCGIGKLKEATEIVEDMEKGDLVPDMMIFTTMMNAYFKSG 352

Query: 383 QAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFN 442
           +   A  ++ ++     EPD+   + +IDG+ KN  + EA+  F   + N       ++ 
Sbjct: 353 RMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAISYFCTEKANDV-----MYT 407

Query: 443 CLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKN 502
            LID LCK         LF K+ + GLVP    Y+  I GLC++G L  A      M + 
Sbjct: 408 VLIDALCKEEDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTKMVQE 467

Query: 503 GCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKD 558
           G   ++  + TL++G        +  ++  +M      + PD   F +++    K+
Sbjct: 468 GLELDLFAYTTLIYGLTSKGLMVEARQVFDEMLRS--GVCPDSAVFDLLIRAYEKE 521



 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 125/472 (26%), Positives = 224/472 (47%), Gaps = 28/472 (5%)

Query: 42  NEFLHENCKSGIIN-----LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVIS 96
           N  +  +C++G I      L   R  +G+       P I SFN LF   +K +  D V  
Sbjct: 95  NSLIDGHCRNGDIRSACLVLESLRASYGFTCK----PDIVSFNTLFNGFSKMKMLDEVFV 150

Query: 97  FYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYG 156
           +   ++     P+ +T +  I+ F       C    +K A   F  M    + P+V+T+ 
Sbjct: 151 YMGVMLKC-CSPNVVTYSTWIDMF-------CKSGELKLALKSFNCMKRDALFPNVVTFT 202

Query: 157 TLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELF 216
            LI+G+C+ G+L V + L+++M        +    N+ +Y+ +ID  CK+G + +A  ++
Sbjct: 203 CLIDGYCKAGDLEVVVSLYEEM------RRVRMSLNVVTYTALIDGFCKKGEMQRAGGMY 256

Query: 217 LEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKG 276
           L M    + P  +V TT+I+GF   G+ +       +ML+ G R ++  + V+I  LC  
Sbjct: 257 LRMLEDRVEPNSLVYTTIINGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGI 316

Query: 277 GKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSY 336
           GK+ EA  ++E M +  L PD   + ++M+ Y   GR+  A  ++  +  +G +  VV+ 
Sbjct: 317 GKLKEATEIVEDMEKGDLVPDMMIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVAL 376

Query: 337 NILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKL 396
           + +I+G  K   + EA+S +    +N V      Y  L+  L +       ++LF ++  
Sbjct: 377 STMIDGIAKNGQLHEAISYFCTEKANDV-----MYTVLIDALCKEEDFIEVERLFSKISE 431

Query: 397 YNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDN 456
             + PD   Y   I GLCK   + +A KL   +     E  +  +  LI GL   G +  
Sbjct: 432 AGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTKMVQEGLELDLFAYTTLIYGLTSKGLMVE 491

Query: 457 AWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNV 508
           A ++F ++ + G+ P    + ++I    ++G +  A+D LL M+  G A  V
Sbjct: 492 ARQVFDEMLRSGVCPDSAVFDLLIRAYEKEGNMTTASDLLLDMQTRGLARAV 543



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 102/394 (25%), Positives = 182/394 (46%), Gaps = 41/394 (10%)

Query: 208 LVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFN 267
           +V +A +    ++     P  V C   IH    +            ++  G  P+  +FN
Sbjct: 1   MVKEALQFLSRLRKSSNLPDPVTCNKHIHQLINSNCGALSLKFLAYLVSRGYAPHRSSFN 60

Query: 268 VMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSK 327
            ++  +CK G++  A  ++  M + G  PD  +YNSL+DG+C  G I +A  +  S+ + 
Sbjct: 61  SVVSFVCKLGQVKFAVDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSACLVLESLRAS 120

Query: 328 ---GCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQA 384
               CK  +VS+N L NG+ K+  ++E   +Y  ++       V+TY+T +    ++G+ 
Sbjct: 121 YGFTCKPDIVSFNTLFNGFSKMKMLDEVF-VYMGVMLKCCSPNVVTYSTWIDMFCKSGEL 179

Query: 385 GYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCL 444
             A K F+ MK   + P++ T+  LIDG CK   ++  V L+  +   +    +  +  L
Sbjct: 180 KLALKSFNCMKRDALFPNVVTFTCLIDGYCKAGDLEVVVSLYEEMRRVRMSLNVVTYTAL 239

Query: 445 IDGLCKAGRL-----------------------------------DNAWELFHKLPQKGL 469
           IDG CK G +                                   DNA +   K+  +G+
Sbjct: 240 IDGFCKKGEMQRAGGMYLRMLEDRVEPNSLVYTTIINGFFQRGDSDNAMKFLAKMLNQGM 299

Query: 470 VPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVE 529
              +  Y ++I GLC  GKL++A + +  MEK    P+++ F T+M+ + ++ +    V 
Sbjct: 300 RLDITAYGVIISGLCGIGKLKEATEIVEDMEKGDLVPDMMIFTTMMNAYFKSGRMKAAVN 359

Query: 530 LLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
           + HK+ E  R   PD    S ++D +AK+ + HE
Sbjct: 360 MYHKLIE--RGFEPDVVALSTMIDGIAKNGQLHE 391


>gi|449480434|ref|XP_004155892.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g18950-like [Cucumis sativus]
          Length = 638

 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 139/495 (28%), Positives = 231/495 (46%), Gaps = 26/495 (5%)

Query: 60  RYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINC 119
           R+F    +  +  P   S N LF A+ + +      SF   L S    P+  +L   I C
Sbjct: 144 RFFLWLSSQPEFLPHPVSCNKLFDALLEAKACVPAKSF---LYSFEFSPEPASLENYIRC 200

Query: 120 FGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMV 179
                  +C    ++EA + F  +   G RP V T+        + G   +  +L++ M+
Sbjct: 201 -------VCEGGLVEEAVYTFDMLKEAGYRPYVETWNFAFQSCLKFGRTDLIWKLYEGMM 253

Query: 180 SGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFC 239
               E G+    +I +   +I + C +  V +A E+  +    G+ P       LI GFC
Sbjct: 254 ----ETGVQKDVDIETVGYLIQAFCNDNKVSRAYEILRQSLEDGLTPCNDAFNKLISGFC 309

Query: 240 CAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRF 299
              N   V  L   M+     P++ T+  +I+  CK     +A  +   +  RG  PD  
Sbjct: 310 KEKNHHRVLELVHTMIVKNRNPDIFTYQEIINGFCKNWMTLQAFEVFNALKDRGYAPDMV 369

Query: 300 TYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQI 359
            Y +L+ G+C +G+++ A +++  M  KG      SYN LI G+CKI N++EAM LY+++
Sbjct: 370 MYTTLIHGFCKMGQLEDASKLWFEMIDKGFLPNEYSYNTLIYGFCKIGNLDEAMKLYKKM 429

Query: 360 ISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCV 419
           + +G ++T ++ NTL+ GL   G+   A   F EM   N+  D+ TYN LI G C+   V
Sbjct: 430 LDSGYKETTLSCNTLILGLCLHGRTDEAYDFFREMPCKNIVCDVITYNTLIQGFCREGKV 489

Query: 420 QEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIM 479
            ++  L   L+    +     +  LI  LC+ G +  A E+++ +  +GL P V T   +
Sbjct: 490 LQSTDLLKELQAKGLQPSTSSYAHLIQKLCQLGSVQEAKEMWNDMHNRGLQPMVCTRDHI 549

Query: 480 IHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQ-----------NNKTSKVV 528
           I GLC +G + +  ++L+ M K+   P   TF  L+   +Q           ++KTSK V
Sbjct: 550 ISGLCEQGYVVEGMEWLITMLKSNLKPQKETFYKLIQSLIQIGKELLLELKMDSKTSKEV 609

Query: 529 ELLHKMAEPERNLVP 543
             L  M +   N +P
Sbjct: 610 YPL-AMTKSSSNFLP 623



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 52/205 (25%), Positives = 87/205 (42%), Gaps = 15/205 (7%)

Query: 38  ETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISF 97
           E   N  ++  CK G  NL+EA   +  M          S N L   +  +   D    F
Sbjct: 403 EYSYNTLIYGFCKIG--NLDEAMKLYKKMLDSGYKETTLSCNTLILGLCLHGRTDEAYDF 460

Query: 98  YRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGT 157
           +R++    ++ D +T N LI       +G C E ++ ++T L K + A G++P   +Y  
Sbjct: 461 FREMPCKNIVCDVITYNTLI-------QGFCREGKVLQSTDLLKELQAKGLQPSTSSYAH 513

Query: 158 LINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFL 217
           LI   C+ G++  A    K+M +  +  GL  +  + +   II  LC++G V +  E  +
Sbjct: 514 LIQKLCQLGSVQEA----KEMWNDMHNRGL--QPMVCTRDHIISGLCEQGYVVEGMEWLI 567

Query: 218 EMKGRGINPAVVVCTTLIHGFCCAG 242
            M    + P       LI      G
Sbjct: 568 TMLKSNLKPQKETFYKLIQSLIQIG 592


>gi|115461911|ref|NP_001054555.1| Os05g0132000 [Oryza sativa Japonica Group]
 gi|52353663|gb|AAU44229.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|113578106|dbj|BAF16469.1| Os05g0132000 [Oryza sativa Japonica Group]
 gi|125550727|gb|EAY96436.1| hypothetical protein OsI_18334 [Oryza sativa Indica Group]
          Length = 637

 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 135/505 (26%), Positives = 236/505 (46%), Gaps = 33/505 (6%)

Query: 72  SPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVEN 131
            P +  +N L  A+ +     AV+  Y  +   G+ P+  T N+LI       R LC  +
Sbjct: 119 DPGVRVYNHLLDALLRENMVGAVVPVYDNMRKAGVDPNVYTYNLLI-------RALCQND 171

Query: 132 RIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVS----------- 180
           R+  A  +   M   G  PD +++GT+++G C+ G +  A     + V            
Sbjct: 172 RVDAARKMLDEMSRKGCHPDEVSHGTIVSGMCKLGRVEEARGFLAETVPVQASYNAVVHA 231

Query: 181 --GDYE--------NGLISK---TNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPA 227
             G++         N ++ +    N+ +Y+ I+D+ CK   +  A  +   M   G  P 
Sbjct: 232 LCGEFRMWEVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPN 291

Query: 228 VVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLE 287
           V+  T L+ GF   G   +   ++  M+D G  P+ +++NV+I  LC  G +  A     
Sbjct: 292 VLTFTALVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFN 351

Query: 288 LMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKIL 347
            M +  L P+  TY++L+DG+   G +D A  I+  M S GCK  VV Y  +I+  CK +
Sbjct: 352 SMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKM 411

Query: 348 NVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYN 407
             ++A SL  +++ +      +T+NTL+  L   G+ G A  +F  M+     P+  TYN
Sbjct: 412 MFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYN 471

Query: 408 ILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQK 467
            L+ GL +    ++A  +   +  N FE  +  +N +I+ LC+     +A  L  ++  +
Sbjct: 472 ELLHGLFREGNHKDAFAMVIEMLNNGFELSLVTYNTVINCLCQMCMRKHAMLLLGRMMVQ 531

Query: 468 GLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKV 527
           G+ P   T++ +IH  C++GK+  A   L  M    C  NVV +  L+       K S  
Sbjct: 532 GIQPDAFTFNAIIHAYCKEGKVSIAACLLGQMNAVNCPRNVVAYTILISELCNQGKLSNA 591

Query: 528 VELLHKMAEPERNLVPDDTTFSIVV 552
           +  L KM      + P++ T++++V
Sbjct: 592 MVYLLKML--YEGICPNEATWNVLV 614



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 116/442 (26%), Positives = 208/442 (47%), Gaps = 15/442 (3%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
           +E  H    SG+  L       G++   +  P  +S+N +  A+        V S   ++
Sbjct: 191 DEVSHGTIVSGMCKLGRVEEARGFLA--ETVPVQASYNAVVHALCGEFRMWEVFSVVNEM 248

Query: 102 VSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLING 161
           V  GL P+ +T   +++ F       C    ++ A  +   M++ G  P+V+T+  L+ G
Sbjct: 249 VQRGLQPNVVTYTTIVDAF-------CKARELRMACAILARMVSMGCTPNVLTFTALVKG 301

Query: 162 FCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKG 221
           F   G +  AL +   MV   +    IS      Y+++I  LC  G +  A + F  MK 
Sbjct: 302 FFEDGKVHDALSMWHWMVDEGWAPSTIS------YNVLIRGLCCIGDLKGALDFFNSMKR 355

Query: 222 RGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINE 281
             + P     +TL+ GF  AG+ +    ++ EM   G +PN++ +  MID LCK    ++
Sbjct: 356 NALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQ 415

Query: 282 ANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILIN 341
           A  L++ M+     P+  T+N+L+   C  GR+  A  +F  M   GC     +YN L++
Sbjct: 416 AESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELLH 475

Query: 342 GYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEP 401
           G  +  N ++A ++  ++++NG   +++TYNT+++ L Q     +A  L   M +  ++P
Sbjct: 476 GLFREGNHKDAFAMVIEMLNNGFELSLVTYNTVINCLCQMCMRKHAMLLLGRMMVQGIQP 535

Query: 402 DLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELF 461
           D  T+N +I   CK   V  A  L   +        +  +  LI  LC  G+L NA    
Sbjct: 536 DAFTFNAIIHAYCKEGKVSIAACLLGQMNAVNCPRNVVAYTILISELCNQGKLSNAMVYL 595

Query: 462 HKLPQKGLVPTVVTYSIMIHGL 483
            K+  +G+ P   T+++++  +
Sbjct: 596 LKMLYEGICPNEATWNVLVRAI 617



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 105/409 (25%), Positives = 190/409 (46%), Gaps = 41/409 (10%)

Query: 159 INGFCRTGNLSVALR-LHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFL 217
           I  F R G+   AL+  ++    G  + G      +  Y+ ++D+L +E +V     ++ 
Sbjct: 93  IGAFARAGSADRALKTFYRASDLGCRDPG------VRVYNHLLDALLRENMVGAVVPVYD 146

Query: 218 EMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGG 277
            M+  G++P V     LI   C     +    +  EM   G  P+ ++   ++  +CK G
Sbjct: 147 NMRKAGVDPNVYTYNLLIRALCQNDRVDAARKMLDEMSRKGCHPDEVSHGTIVSGMCKLG 206

Query: 278 KINEANGLL------------------------------ELMIQRGLNPDRFTYNSLMDG 307
           ++ EA G L                                M+QRGL P+  TY +++D 
Sbjct: 207 RVEEARGFLAETVPVQASYNAVVHALCGEFRMWEVFSVVNEMVQRGLQPNVVTYTTIVDA 266

Query: 308 YCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQT 367
           +C    +  A  I   M S GC   V+++  L+ G+ +   V +A+S++  ++  G   +
Sbjct: 267 FCKARELRMACAILARMVSMGCTPNVLTFTALVKGFFEDGKVHDALSMWHWMVDEGWAPS 326

Query: 368 VITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFH 427
            I+YN L+ GL   G    A   F+ MK   + P+ +TY+ L+DG      +  A+ +++
Sbjct: 327 TISYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWN 386

Query: 428 MLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKG 487
            ++ +  +  + ++  +ID LCK    D A  L  K+      P  VT++ +I  LC  G
Sbjct: 387 EMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCG 446

Query: 488 KLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQ--NNKT--SKVVELLH 532
           ++ +A +    M +NGC PN  T+N L+HG  +  N+K   + V+E+L+
Sbjct: 447 RVGRALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDAFAMVIEMLN 495



 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 96/399 (24%), Positives = 182/399 (45%), Gaps = 9/399 (2%)

Query: 196 YSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEML 255
           +   +  L   G VD  +    EM+ RG+          I  F  AG+ +     F    
Sbjct: 54  HEATVRRLAAAGDVDGVQYALQEMRLRGVACTEDALVAAIGAFARAGSADRALKTFYRAS 113

Query: 256 DLGPR-PNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRI 314
           DLG R P +  +N ++D L +   +     + + M + G++P+ +TYN L+   C   R+
Sbjct: 114 DLGCRDPGVRVYNHLLDALLRENMVGAVVPVYDNMRKAGVDPNVYTYNLLIRALCQNDRV 173

Query: 315 DTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTL 374
           D AR++   M  KGC    VS+  +++G CK+  VEEA     + +         +YN +
Sbjct: 174 DAARKMLDEMSRKGCHPDEVSHGTIVSGMCKLGRVEEARGFLAETVP-----VQASYNAV 228

Query: 375 LSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKF 434
           +  L    +      + +EM    ++P++ TY  ++D  CK   ++ A  +   +     
Sbjct: 229 VHALCGEFRMWEVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMGC 288

Query: 435 EFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKAND 494
              +  F  L+ G  + G++ +A  ++H +  +G  P+ ++Y+++I GLC  G L+ A D
Sbjct: 289 TPNVLTFTALVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALD 348

Query: 495 FLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDL 554
           F   M++N   PN  T++TL+ GF         + + ++M        P+   ++ ++D+
Sbjct: 349 FFNSMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSS--GCKPNVVVYTNMIDV 406

Query: 555 LAKDEKYHEC-SAVSKSSYRACLYVTIFQPSSLGSMIGC 592
           L K   + +  S + K     C   T+   + +G +  C
Sbjct: 407 LCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDC 445



 Score = 85.5 bits (210), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 88/388 (22%), Positives = 141/388 (36%), Gaps = 106/388 (27%)

Query: 56  LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNI 115
           L  A      M  M  +P + +F  L     ++      +S +  +V  G  P  ++ N+
Sbjct: 273 LRMACAILARMVSMGCTPNVLTFTALVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNV 332

Query: 116 LINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLH 175
           LI       RGLC    +K A   F +M    + P+  TY TL++GF   G+L  A+ + 
Sbjct: 333 LI-------RGLCCIGDLKGALDFFNSMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIW 385

Query: 176 KKMVSG----------------------DYENGLISK-------TNIFSYSIIIDSLCKE 206
            +M S                       D    LI K        N  +++ +I  LC  
Sbjct: 386 NEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDC 445

Query: 207 GLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLD---------- 256
           G V +A  +F  M+  G +P       L+HG    GN ++   + IEML+          
Sbjct: 446 GRVGRALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDAFAMVIEMLNNGFELSLVTY 505

Query: 257 -------------------------LGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQ 291
                                     G +P+  TFN +I   CK GK++ A         
Sbjct: 506 NTVINCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAIIHAYCKEGKVSIA--------- 556

Query: 292 RGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEE 351
                            CL+G+          M++  C   VV+Y ILI+  C    +  
Sbjct: 557 ----------------ACLLGQ----------MNAVNCPRNVVAYTILISELCNQGKLSN 590

Query: 352 AMSLYRQIISNGVRQTVITYNTLLSGLF 379
           AM    +++  G+     T+N L+  +F
Sbjct: 591 AMVYLLKMLYEGICPNEATWNVLVRAIF 618


>gi|357438845|ref|XP_003589699.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355478747|gb|AES59950.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 806

 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 140/506 (27%), Positives = 245/506 (48%), Gaps = 36/506 (7%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
           P +  +NL+  A+     +  + + Y  + S GL P+  T N+L+       + LC   +
Sbjct: 142 PSVKIYNLVLDALLSQNLFKMINALYNNMKSEGLEPNVFTYNVLL-------KALCQNGK 194

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKK----------MVSG- 181
           +  A  L   M   G  PD ++Y T+I+  C+ G++  A  L  K          ++ G 
Sbjct: 195 VDGACKLLVEMSNKGCDPDDVSYTTVISSMCKLGDVDKARELAMKFEPVVPVYNALIHGV 254

Query: 182 ----------DYENGLISK---TNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
                     D  N ++ +    N+ SYS +I  L   G V+ +  +F  M  RG  P V
Sbjct: 255 CKECRFKEAFDLMNEMVDRGVDPNVISYSTVISCLSDMGNVELSLAVFGRMFVRGCRPNV 314

Query: 229 VVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLEL 288
              T+LI GF   G   +  GL+  M+  G  PN++ +N +I  LC  G ++EA  +   
Sbjct: 315 QTFTSLIKGFFVRGRVGDAVGLWNLMIREGVSPNVVAYNTLIHGLCSDGNMDEAISVWNQ 374

Query: 289 MIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILN 348
           M +  + P+  TY++++ G+   G + +A E +  M + GC+  VV Y  +++  C++  
Sbjct: 375 MEKDSIRPNVTTYSTIIYGFAKSGDLVSACETWNKMINCGCRPNVVVYTCMVDVLCQMSM 434

Query: 349 VEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNI 408
            ++A  L   +IS+G   TVIT+N  + GL +AG+  +A  + D+M+ Y   P++ TYN 
Sbjct: 435 FDQAFDLIDNMISDGCPPTVITFNNFIKGLCRAGRVEWAMNVLDQMEKYECLPNIRTYNE 494

Query: 409 LIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKG 468
           L+DGL + N  +EA  L   LE  K EF    +N ++ G    G      +L  K+   G
Sbjct: 495 LLDGLFRANAFREACGLIRELEERKVEFDCVTYNTIMYGFSFNGMHQQVLQLLGKMLVNG 554

Query: 469 LVPTVVTYSIMIHGLCRKGKLEKANDFL--LYMEKNGCAPNVVTFNTLMHGFLQNNKTSK 526
           +    +T +  ++  C+ GK++ A   L  +  EK   A +++T   ++ G      T +
Sbjct: 555 IKLDTITVNTTVNAYCKLGKVKTAIKVLDNISAEKEFRA-DIITHTIILWGICNWLGTEE 613

Query: 527 VVELLHKMAEPERNLVPDDTTFSIVV 552
            V  LH+M   +R + P+  T++++V
Sbjct: 614 AVVYLHEML--KRGIFPNIATWNVLV 637



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 112/441 (25%), Positives = 215/441 (48%), Gaps = 38/441 (8%)

Query: 153 ITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKA 212
           +TY T+I+   R   +     L ++M     EN   S+  +F +  +I    +  L ++ 
Sbjct: 75  LTYETMIDKLGRNNEMDGVSYLLQQM---KLENVPCSQ-ELFQF--VIKCYRRSNLGEQG 128

Query: 213 KELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDC 272
            ++F  ++  G  P+V +   ++        ++ +N L+  M   G  PN+ T+NV++  
Sbjct: 129 LKMFYRIREFGCEPSVKIYNLVLDALLSQNLFKMINALYNNMKSEGLEPNVFTYNVLLKA 188

Query: 273 LCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFL---------- 322
           LC+ GK++ A  LL  M  +G +PD  +Y +++   C +G +D ARE+ +          
Sbjct: 189 LCQNGKVDGACKLLVEMSNKGCDPDDVSYTTVISSMCKLGDVDKARELAMKFEPVVPVYN 248

Query: 323 --------------------SMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISN 362
                                M  +G    V+SY+ +I+    + NVE +++++ ++   
Sbjct: 249 ALIHGVCKECRFKEAFDLMNEMVDRGVDPNVISYSTVISCLSDMGNVELSLAVFGRMFVR 308

Query: 363 GVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEA 422
           G R  V T+ +L+ G F  G+ G A  L++ M    V P++  YN LI GLC +  + EA
Sbjct: 309 GCRPNVQTFTSLIKGFFVRGRVGDAVGLWNLMIREGVSPNVVAYNTLIHGLCSDGNMDEA 368

Query: 423 VKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHG 482
           + +++ +E +     +  ++ +I G  K+G L +A E ++K+   G  P VV Y+ M+  
Sbjct: 369 ISVWNQMEKDSIRPNVTTYSTIIYGFAKSGDLVSACETWNKMINCGCRPNVVVYTCMVDV 428

Query: 483 LCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLV 542
           LC+    ++A D +  M  +GC P V+TFN  + G  +  +    + +L +M + E   +
Sbjct: 429 LCQMSMFDQAFDLIDNMISDGCPPTVITFNNFIKGLCRAGRVEWAMNVLDQMEKYE--CL 486

Query: 543 PDDTTFSIVVDLLAKDEKYHE 563
           P+  T++ ++D L +   + E
Sbjct: 487 PNIRTYNELLDGLFRANAFRE 507



 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 100/368 (27%), Positives = 173/368 (47%), Gaps = 16/368 (4%)

Query: 48  NCKSGIINLNEARYFFGYMTHMQPSPPISSF-NLLFGAVAKNRHYDAVISFYRKLVSIGL 106
           +C S + N+  +   FG M      P + +F +L+ G   + R  DAV   +  ++  G+
Sbjct: 287 SCLSDMGNVELSLAVFGRMFVRGCRPNVQTFTSLIKGFFVRGRVGDAV-GLWNLMIREGV 345

Query: 107 LPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTG 166
            P+ +  N LI+       GLC +  + EA  ++  M    +RP+V TY T+I GF ++G
Sbjct: 346 SPNVVAYNTLIH-------GLCSDGNMDEAISVWNQMEKDSIRPNVTTYSTIIYGFAKSG 398

Query: 167 NLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINP 226
           +L  A     KM++         + N+  Y+ ++D LC+  + D+A +L   M   G  P
Sbjct: 399 DLVSACETWNKMINCG------CRPNVVVYTCMVDVLCQMSMFDQAFDLIDNMISDGCPP 452

Query: 227 AVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLL 286
            V+     I G C AG  E    +  +M      PN+ T+N ++D L +     EA GL+
Sbjct: 453 TVITFNNFIKGLCRAGRVEWAMNVLDQMEKYECLPNIRTYNELLDGLFRANAFREACGLI 512

Query: 287 ELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKI 346
             + +R +  D  TYN++M G+   G      ++   M   G K   ++ N  +N YCK+
Sbjct: 513 RELEERKVEFDCVTYNTIMYGFSFNGMHQQVLQLLGKMLVNGIKLDTITVNTTVNAYCKL 572

Query: 347 LNVEEAMSLYRQIISNG-VRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLST 405
             V+ A+ +   I +    R  +IT+  +L G+        A     EM    + P+++T
Sbjct: 573 GKVKTAIKVLDNISAEKEFRADIITHTIILWGICNWLGTEEAVVYLHEMLKRGIFPNIAT 632

Query: 406 YNILIDGL 413
           +N+L+ G 
Sbjct: 633 WNVLVRGF 640



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 46/191 (24%), Positives = 95/191 (49%), Gaps = 2/191 (1%)

Query: 348 NVEEAMSLYRQIISNGV-RQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTY 406
           ++  ++  ++ + ++G  + T +TY T++  L +  +      L  +MKL NV      +
Sbjct: 53  DIVSSLEYFKSLSNSGTFKHTHLTYETMIDKLGRNNEMDGVSYLLQQMKLENVPCSQELF 112

Query: 407 NILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQ 466
             +I    ++N  ++ +K+F+ +     E  ++I+N ++D L           L++ +  
Sbjct: 113 QFVIKCYRRSNLGEQGLKMFYRIREFGCEPSVKIYNLVLDALLSQNLFKMINALYNNMKS 172

Query: 467 KGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSK 526
           +GL P V TY++++  LC+ GK++ A   L+ M   GC P+ V++ T++    +     K
Sbjct: 173 EGLEPNVFTYNVLLKALCQNGKVDGACKLLVEMSNKGCDPDDVSYTTVISSMCKLGDVDK 232

Query: 527 VVELLHKMAEP 537
             EL  K  EP
Sbjct: 233 ARELAMKF-EP 242


>gi|115434588|ref|NP_001042052.1| Os01g0153200 [Oryza sativa Japonica Group]
 gi|113531583|dbj|BAF03966.1| Os01g0153200 [Oryza sativa Japonica Group]
          Length = 1139

 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 132/503 (26%), Positives = 234/503 (46%), Gaps = 38/503 (7%)

Query: 84  AVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNM 143
           A  ++R+ D       ++ S G+    +  N+L+        GLC   R++EA  +   M
Sbjct: 207 AYCESRNLDGARGLVVRMESEGVKASAVPYNVLM-------YGLCKNMRVQEAVEVKNVM 259

Query: 144 IAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDY---------------ENGLI 188
           +  GV  D +TY TL+ GFCR   L +ALR+   M+   +               +  L+
Sbjct: 260 VNIGVTADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELV 319

Query: 189 SKT--------------NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTL 234
            +               N+F+Y+ +ID LCK    D A  LF EM GRG+ P  V    L
Sbjct: 320 EEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAIL 379

Query: 235 IHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGL 294
           IH  C  G  E+   LF +M D G +  +  +N +I+  CK G ++ A GLL  M++ GL
Sbjct: 380 IHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGL 439

Query: 295 NPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMS 354
            P   +Y+ L+ G C  G + +  E+   M  +G      ++  LING+CK   ++EA  
Sbjct: 440 TPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAAR 499

Query: 355 LYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLC 414
           L+ ++I + V    +T+N ++ G    G    A +L+D+M    ++PD  TY  LI GLC
Sbjct: 500 LFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLC 559

Query: 415 KNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVV 474
             + V +A +    LE +           L+ G  + GR    + L+ ++  +G+   +V
Sbjct: 560 LTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLV 619

Query: 475 TYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKM 534
           +++I+++   ++   EK+      M++ G  P+ + +  ++    +     + +    +M
Sbjct: 620 SFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQM 679

Query: 535 AEPERNLVPDDTTFSIVVDLLAK 557
                   P+  T +++++ L K
Sbjct: 680 V--VDGYSPNTVTHTVLINNLCK 700



 Score =  196 bits (498), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 144/513 (28%), Positives = 225/513 (43%), Gaps = 82/513 (15%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
           P + ++N L   + KN  +D     ++++   GL P+ +T  ILI+        LC    
Sbjct: 336 PNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIH-------ALCKRGM 388

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
           I++A  LF  M   G++  V  Y +LING+C+ G+L  A    + ++SG  + GL     
Sbjct: 389 IEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRA----RGLLSGMVKEGLTPTAA 444

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
             SYS +I  LC+ G +    EL  EM  RGI       T LI+GFC     +E   LF 
Sbjct: 445 --SYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFD 502

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDR-------------- 298
           +M+D    PN +TFNVMI+  C  G I +A  L + M++ GL PD               
Sbjct: 503 KMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTS 562

Query: 299 ---------------------FTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYN 337
                                F+  +L+ G+   GR      ++  M  +G K  +VS+ 
Sbjct: 563 GVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFT 622

Query: 338 ILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLY 397
           I++    K  + E++  L+R++   GV+   I Y  ++  L +      A   +D+M + 
Sbjct: 623 IIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVD 682

Query: 398 NVEPDLSTYNILIDGLCKN-------------------------NCV---------QEAV 423
              P+  T+ +LI+ LCK+                         NC           E  
Sbjct: 683 GYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKA 742

Query: 424 KLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGL 483
           K  H   +      I  FN LI GLCKAG++  A +L  K+ + G  P  ++YS +IH L
Sbjct: 743 KDLHSAMLQGHLASIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHEL 802

Query: 484 CRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMH 516
           C+ G + KA +    M   G  P+VV +N  + 
Sbjct: 803 CKMGDINKAFELWNEMLYKGLKPDVVAYNIFIR 835



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 140/519 (26%), Positives = 236/519 (45%), Gaps = 49/519 (9%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
           P  ++ + +   + K    +   S   KL  +G++P+    N LI+        LC   R
Sbjct: 301 PSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALID-------KLCKNER 353

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
             +A  LFK M   G+ P+ +TY  LI+  C+ G +  AL L  KM     + G+  K  
Sbjct: 354 FDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKM----RDKGI--KVT 407

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
           ++ Y+ +I+  CK+G +D+A+ L   M   G+ P     + LI G C  G+      L  
Sbjct: 408 VYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHR 467

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
           EM + G   N  TF  +I+  CK  K++EA  L + MI   + P+  T+N +++GYCLVG
Sbjct: 468 EMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVG 527

Query: 313 RIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYN 372
            I  A +++  M   G K    +Y  LI+G C    V +A      + ++       +  
Sbjct: 528 NIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLT 587

Query: 373 TLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMN 432
            LL G F+ G+      L+DEM +  V+ DL ++ I++    K +  +++  LF  ++  
Sbjct: 588 ALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQ 647

Query: 433 KFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKA 492
             +     + C+ID L K   +  A   + ++   G  P  VT++++I+ LC+ G L  A
Sbjct: 648 GVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSA 707

Query: 493 -------------------NDFLLY------MEK---------NGCAPNVVTFNTLMHGF 518
                              N FL Y      MEK          G   ++V+FN L+ G 
Sbjct: 708 ELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQGHLASIVSFNILIKGL 767

Query: 519 LQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAK 557
            +  K  + ++L+ K+   E    PD  ++S ++  L K
Sbjct: 768 CKAGKIQEAIDLMSKIT--ESGFSPDCISYSTIIHELCK 804



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 127/442 (28%), Positives = 215/442 (48%), Gaps = 11/442 (2%)

Query: 125 RGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYE 184
           R  C    +  A  L   M + GV+   + Y  L+ G C+   +  A+ +   MV+    
Sbjct: 206 RAYCESRNLDGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVN---- 261

Query: 185 NGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNW 244
             +    +  +Y  ++   C+   ++ A  +  +M   G  P+   C+ +I         
Sbjct: 262 --IGVTADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELV 319

Query: 245 EEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSL 304
           EE   L  ++ DLG  PN+  +N +ID LCK  + ++A+ L + M  RGL P+  TY  L
Sbjct: 320 EEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAIL 379

Query: 305 MDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGV 364
           +   C  G I+ A  +F  M  KG K TV  YN LINGYCK  +++ A  L   ++  G+
Sbjct: 380 IHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGL 439

Query: 365 RQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVK 424
             T  +Y+ L++GL + G      +L  EM    +  +  T+  LI+G CK+  + EA +
Sbjct: 440 TPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAAR 499

Query: 425 LF-HMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGL 483
           LF  M++ N     +  FN +I+G C  G +  A++L+ ++ + GL P   TY  +I GL
Sbjct: 500 LFDKMIDSNVIPNEV-TFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGL 558

Query: 484 CRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVP 543
           C    + KAN+F+  +E +    N  +   L++GF +  + ++   L  +MA   R +  
Sbjct: 559 CLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMA--VRGVKL 616

Query: 544 DDTTFSIVV-DLLAKDEKYHEC 564
           D  +F+I+V   L + +K   C
Sbjct: 617 DLVSFTIIVYAALKQHDKEKSC 638



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 131/476 (27%), Positives = 221/476 (46%), Gaps = 16/476 (3%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
           N  ++  CK G  +L+ AR     M     +P  +S++ L   + +N    + +  +R++
Sbjct: 412 NSLINGYCKQG--SLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREM 469

Query: 102 VSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLING 161
              G+  +  T   LIN       G C + ++ EA  LF  MI   V P+ +T+  +I G
Sbjct: 470 AERGIAWNNYTFTALIN-------GFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEG 522

Query: 162 FCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKG 221
           +C  GN+  A +L+ +MV    E GL  K + ++Y  +I  LC    V KA E   +++ 
Sbjct: 523 YCLVGNIRKAFQLYDQMV----EMGL--KPDNYTYRSLISGLCLTSGVSKANEFVADLEN 576

Query: 222 RGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINE 281
                     T L++GF   G + E   L+ EM   G + +L++F +++    K     +
Sbjct: 577 SYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEK 636

Query: 282 ANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILIN 341
           +  L   M ++G+ PD   Y  ++D       +  A   +  M   G     V++ +LIN
Sbjct: 637 SCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLIN 696

Query: 342 GYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEP 401
             CK   +  A  L +++++  V     TYN  L      G    A+ L   M L     
Sbjct: 697 NLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAM-LQGHLA 755

Query: 402 DLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELF 461
            + ++NILI GLCK   +QEA+ L   +  + F      ++ +I  LCK G ++ A+EL+
Sbjct: 756 SIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELW 815

Query: 462 HKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHG 517
           +++  KGL P VV Y+I I      G+ +KA      M ++G  PN  T+  L+ G
Sbjct: 816 NEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSG 871



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 112/362 (30%), Positives = 187/362 (51%), Gaps = 2/362 (0%)

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
           N ++ S I+ SL K      A++LF +M   G++    V T  I  +C + N +   GL 
Sbjct: 162 NQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLV 221

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
           + M   G + + + +NV++  LCK  ++ EA  +  +M+  G+  D  TY +L+ G+C +
Sbjct: 222 VRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRM 281

Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
             ++ A  I   M   G   +  + + +I+   K   VEEA SL  ++   G+   V  Y
Sbjct: 282 EELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAY 341

Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
           N L+  L +  +   A +LF EM    +EP+  TY ILI  LCK   +++A+ LF  +  
Sbjct: 342 NALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRD 401

Query: 432 NKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEK 491
              +  +  +N LI+G CK G LD A  L   + ++GL PT  +YS +I GLCR G L  
Sbjct: 402 KGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSS 461

Query: 492 ANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIV 551
             +    M + G A N  TF  L++GF ++ K  +   L  KM   + N++P++ TF+++
Sbjct: 462 CMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMI--DSNVIPNEVTFNVM 519

Query: 552 VD 553
           ++
Sbjct: 520 IE 521



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 119/396 (30%), Positives = 191/396 (48%), Gaps = 6/396 (1%)

Query: 139 LFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSI 198
           LF  M+  GV  D   Y   I  +C + NL  A  L  +M S     G+  K +   Y++
Sbjct: 185 LFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLVVRMES----EGV--KASAVPYNV 238

Query: 199 IIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLG 258
           ++  LCK   V +A E+   M   G+    V   TL++GFC     E    +  +M+ LG
Sbjct: 239 LMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMALRITHDMIRLG 298

Query: 259 PRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAR 318
             P+    + MID L K   + EA  L   +   G+ P+ F YN+L+D  C   R D A 
Sbjct: 299 FVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDAD 358

Query: 319 EIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGL 378
            +F  M  +G +   V+Y ILI+  CK   +E+A+ L+ ++   G++ TV  YN+L++G 
Sbjct: 359 RLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGY 418

Query: 379 FQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGI 438
            + G    A+ L   M    + P  ++Y+ LI GLC+N  +   ++L   +      +  
Sbjct: 419 CKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNN 478

Query: 439 EIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLY 498
             F  LI+G CK  ++D A  LF K+    ++P  VT+++MI G C  G + KA      
Sbjct: 479 YTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQ 538

Query: 499 MEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKM 534
           M + G  P+  T+ +L+ G    +  SK  E +  +
Sbjct: 539 MVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADL 574



 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 99/346 (28%), Positives = 166/346 (47%), Gaps = 37/346 (10%)

Query: 255 LDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRI 314
           L  G   N  T + ++  L K  +   A  L + M+Q G++ D + Y + +  YC    +
Sbjct: 155 LSSGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNL 214

Query: 315 DTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTL 374
           D AR + + M S+G K + V YN+L+ G CK + V+EA+ +   +++ GV    +TY TL
Sbjct: 215 DGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTL 274

Query: 375 LSGLFQAGQAGYAQKLFDEM-----------------KLYNVE----------------- 400
           + G  +  +   A ++  +M                 +L   E                 
Sbjct: 275 VYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGM 334

Query: 401 -PDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWE 459
            P++  YN LID LCKN    +A +LF  +     E     +  LI  LCK G +++A  
Sbjct: 335 VPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALC 394

Query: 460 LFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFL 519
           LF K+  KG+  TV  Y+ +I+G C++G L++A   L  M K G  P   +++ L+ G  
Sbjct: 395 LFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLC 454

Query: 520 QNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECS 565
           +N   S  +EL  +MA  ER +  ++ TF+ +++   KD+K  E +
Sbjct: 455 RNGDLSSCMELHREMA--ERGIAWNNYTFTALINGFCKDKKMDEAA 498



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 91/400 (22%), Positives = 173/400 (43%), Gaps = 70/400 (17%)

Query: 77  SFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEA 136
           +F  L     K++  D     + K++   ++P+ +T N++I        G C+   I++A
Sbjct: 480 TFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMI-------EGYCLVGNIRKA 532

Query: 137 TWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKM---------------VSG 181
             L+  M+  G++PD  TY +LI+G C T  +S A      +               + G
Sbjct: 533 FQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYG 592

Query: 182 DYENGLISKT--------------NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPA 227
            +  G  ++T              ++ S++II+ +  K+   +K+  LF EMK +G+ P 
Sbjct: 593 FFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPD 652

Query: 228 VVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLE 287
            +  T +I       N  +    + +M+  G  PN +T  V+I+ LCK G +  A  L +
Sbjct: 653 DIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCK 712

Query: 288 LMIQRGLNPDRFTYNSLMD----------------------------------GYCLVGR 313
            M+   + P++FTYN  +D                                  G C  G+
Sbjct: 713 EMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQGHLASIVSFNILIKGLCKAGK 772

Query: 314 IDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNT 373
           I  A ++   +   G     +SY+ +I+  CK+ ++ +A  L+ +++  G++  V+ YN 
Sbjct: 773 IQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNI 832

Query: 374 LLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGL 413
            +      G++  A  ++  M    V+P+  TY  L+ G+
Sbjct: 833 FIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSGI 872



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 76/274 (27%), Positives = 132/274 (48%), Gaps = 14/274 (5%)

Query: 77  SFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEA 136
           SF ++  A  K    +     +R++   G+ PD +    +I+        L  E  + +A
Sbjct: 620 SFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMID-------ALSKEENMIQA 672

Query: 137 TWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSY 196
              +  M+  G  P+ +T+  LIN  C++G L  A  L K+M++G+         N F+Y
Sbjct: 673 LNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNV------LPNKFTY 726

Query: 197 SIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLD 256
           +  +D    EG ++KAK+L   M  +G   ++V    LI G C AG  +E   L  ++ +
Sbjct: 727 NCFLDYFATEGDMEKAKDLHSAML-QGHLASIVSFNILIKGLCKAGKIQEAIDLMSKITE 785

Query: 257 LGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDT 316
            G  P+ ++++ +I  LCK G IN+A  L   M+ +GL PD   YN  +    + G  D 
Sbjct: 786 SGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDK 845

Query: 317 AREIFLSMHSKGCKHTVVSYNILINGYCKILNVE 350
           A  I+ +M   G +    +Y  L++G   +L+ +
Sbjct: 846 ALGIYTNMIRSGVQPNWDTYRALLSGISLMLHYD 879



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 68/254 (26%), Positives = 121/254 (47%), Gaps = 14/254 (5%)

Query: 62  FFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFG 121
            F  M      P    +  +  A++K  +    ++ + ++V  G  P+ +T  +LIN   
Sbjct: 640 LFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLIN--- 696

Query: 122 NKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSG 181
                LC    +  A  L K M+A  V P+  TY   ++ F   G++  A  LH  M+ G
Sbjct: 697 ----NLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQG 752

Query: 182 DYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCA 241
                     +I S++I+I  LCK G + +A +L  ++   G +P  +  +T+IH  C  
Sbjct: 753 HL-------ASIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKM 805

Query: 242 GNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTY 301
           G+  +   L+ EML  G +P+++ +N+ I      G+ ++A G+   MI+ G+ P+  TY
Sbjct: 806 GDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTY 865

Query: 302 NSLMDGYCLVGRID 315
            +L+ G  L+   D
Sbjct: 866 RALLSGISLMLHYD 879



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 50/210 (23%), Positives = 94/210 (44%), Gaps = 2/210 (0%)

Query: 360 ISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCV 419
           +S+G+     T + +L  L +  Q   A+ LFD+M    V  D   Y   I   C++  +
Sbjct: 155 LSSGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNL 214

Query: 420 QEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIM 479
             A  L   +E    +     +N L+ GLCK  R+  A E+ + +   G+    VTY  +
Sbjct: 215 DGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTL 274

Query: 480 IHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPER 539
           ++G CR  +LE A      M + G  P+    + ++    +     +   L  K+   + 
Sbjct: 275 VYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLG--DL 332

Query: 540 NLVPDDTTFSIVVDLLAKDEKYHECSAVSK 569
            +VP+   ++ ++D L K+E++ +   + K
Sbjct: 333 GMVPNVFAYNALIDKLCKNERFDDADRLFK 362


>gi|297846140|ref|XP_002890951.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297336793|gb|EFH67210.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 689

 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 127/458 (27%), Positives = 222/458 (48%), Gaps = 23/458 (5%)

Query: 50  KSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPD 109
           K+G++ +      F    H      +  F+       K  +       Y++++  G+ P+
Sbjct: 225 KAGMLGMGHK--LFSQALHKGVKLDVVVFSSTIDVYVKFGYLTTAFDVYKRMLCQGISPN 282

Query: 110 FLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLS 169
            +T  ILI       +GLC + RI EA  ++  ++  G+ P V+TY +LI+GFC+ GNL 
Sbjct: 283 VVTYTILI-------KGLCQDGRIYEAFGIYCQILKRGLEPSVVTYSSLIDGFCKYGNLR 335

Query: 170 VALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVV 229
               L++ M+   Y        ++  Y +++D LCK+GL+  A    ++  G+ I P VV
Sbjct: 336 SGFALYEDMIKMGYP------PDVVIYGVLVDGLCKQGLMLHALRFSVKTLGQSIRPNVV 389

Query: 230 VCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELM 289
           V  +LI G+C     +E   +F  M   G +P++ T   ++      G++ E   L   M
Sbjct: 390 VFNSLIDGWCRLNRCDEALKVFRLMGIYGIKPDVATITTLMRVTVMEGRLKEGLFLFFRM 449

Query: 290 IQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNV 349
            + GL PD   + +LMD +C   +     ++F  M        +   N++IN   K  +V
Sbjct: 450 FKMGLEPDAVAFCTLMDAFCKNMKPTIGLQLFDLMQRNKIPADIAVCNVVINLLFKGQSV 509

Query: 350 EEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNIL 409
           EEA   +  ++   +   ++TYNT++ G     +   A ++F+ +K     P+  T  IL
Sbjct: 510 EEASKFFNNLLEGKMEPDIVTYNTMICGYCSLRRLDEAARIFEMLKFTPFGPNAVTLTIL 569

Query: 410 IDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGL 469
           I  LCKN+ +  A+++     ++           +IDGLCK GR+D A  +FH+     +
Sbjct: 570 IHTLCKNSDMDGALRIISPSIISYSI--------IIDGLCKRGRVDEATNIFHQAIDAKI 621

Query: 470 VPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPN 507
           +P VV Y+I+I G C+ G+L +A     +M +NG  P+
Sbjct: 622 LPDVVAYAILIRGCCKVGRLVEAALLYEHMLRNGVKPD 659



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 127/418 (30%), Positives = 205/418 (49%), Gaps = 13/418 (3%)

Query: 105 GLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCR 164
           G  P+ +T   LIN       G C    +  A  LFK M   G+ PD+I Y TLI+G+ +
Sbjct: 173 GPAPNVVTFCTLIN-------GFCKRGEMDRAFELFKVMEQRGIAPDLIAYSTLIDGYFK 225

Query: 165 TGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGI 224
            G L +      K+ S     G+  K ++  +S  ID   K G +  A +++  M  +GI
Sbjct: 226 AGMLGMG----HKLFSQALHKGV--KLDVVVFSSTIDVYVKFGYLTTAFDVYKRMLCQGI 279

Query: 225 NPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANG 284
           +P VV  T LI G C  G   E  G++ ++L  G  P+++T++ +ID  CK G +     
Sbjct: 280 SPNVVTYTILIKGLCQDGRIYEAFGIYCQILKRGLEPSVVTYSSLIDGFCKYGNLRSGFA 339

Query: 285 LLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYC 344
           L E MI+ G  PD   Y  L+DG C  G +  A    +    +  +  VV +N LI+G+C
Sbjct: 340 LYEDMIKMGYPPDVVIYGVLVDGLCKQGLMLHALRFSVKTLGQSIRPNVVVFNSLIDGWC 399

Query: 345 KILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLS 404
           ++   +EA+ ++R +   G++  V T  TL+      G+      LF  M    +EPD  
Sbjct: 400 RLNRCDEALKVFRLMGIYGIKPDVATITTLMRVTVMEGRLKEGLFLFFRMFKMGLEPDAV 459

Query: 405 TYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKL 464
            +  L+D  CKN      ++LF +++ NK    I + N +I+ L K   ++ A + F+ L
Sbjct: 460 AFCTLMDAFCKNMKPTIGLQLFDLMQRNKIPADIAVCNVVINLLFKGQSVEEASKFFNNL 519

Query: 465 PQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNN 522
            +  + P +VTY+ MI G C   +L++A      ++     PN VT   L+H   +N+
Sbjct: 520 LEGKMEPDIVTYNTMICGYCSLRRLDEAARIFEMLKFTPFGPNAVTLTILIHTLCKNS 577



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 128/503 (25%), Positives = 232/503 (46%), Gaps = 44/503 (8%)

Query: 71  PSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVE 130
           P+P + +F  L     K    D     ++ +   G+ PD +  + LI+       G    
Sbjct: 174 PAPNVVTFCTLINGFCKRGEMDRAFELFKVMEQRGIAPDLIAYSTLID-------GYFKA 226

Query: 131 NRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISK 190
             +     LF   +  GV+ DV+ + + I+ + + G L+ A  ++K+M+      G+   
Sbjct: 227 GMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKFGYLTTAFDVYKRMLC----QGI--S 280

Query: 191 TNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGL 250
            N+ +Y+I+I  LC++G + +A  ++ ++  RG+ P+VV  ++LI GFC  GN      L
Sbjct: 281 PNVVTYTILIKGLCQDGRIYEAFGIYCQILKRGLEPSVVTYSSLIDGFCKYGNLRSGFAL 340

Query: 251 FIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCL 310
           + +M+ +G  P+++ + V++D LCK G +  A       + + + P+   +NSL+DG+C 
Sbjct: 341 YEDMIKMGYPPDVVIYGVLVDGLCKQGLMLHALRFSVKTLGQSIRPNVVVFNSLIDGWCR 400

Query: 311 VGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVIT 370
           + R D A ++F  M   G K  V +   L+        ++E + L+ ++   G+    + 
Sbjct: 401 LNRCDEALKVFRLMGIYGIKPDVATITTLMRVTVMEGRLKEGLFLFFRMFKMGLEPDAVA 460

Query: 371 YNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLE 430
           + TL+    +  +     +LFD M+   +  D++  N++I+ L K   V+EA K F+ L 
Sbjct: 461 FCTLMDAFCKNMKPTIGLQLFDLMQRNKIPADIAVCNVVINLLFKGQSVEEASKFFNNLL 520

Query: 431 MNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIM----------- 479
             K E  I  +N +I G C   RLD A  +F  L      P  VT +I+           
Sbjct: 521 EGKMEPDIVTYNTMICGYCSLRRLDEAARIFEMLKFTPFGPNAVTLTILIHTLCKNSDMD 580

Query: 480 ----------------IHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNK 523
                           I GLC++G++++A +           P+VV +  L+ G  +  +
Sbjct: 581 GALRIISPSIISYSIIIDGLCKRGRVDEATNIFHQAIDAKILPDVVAYAILIRGCCKVGR 640

Query: 524 TSKVVELLHKMAEPERNLV-PDD 545
             +   L   M    RN V PDD
Sbjct: 641 LVEAALLYEHML---RNGVKPDD 660



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 88/369 (23%), Positives = 174/369 (47%), Gaps = 38/369 (10%)

Query: 195 SYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEM 254
           ++  ++D+L ++G V KA +    +  RG    +V C  ++             GL ++ 
Sbjct: 111 AHGFVLDALFRKGEVTKALDFHRLVMERGFRVDIVSCNKIL------------KGLSVDQ 158

Query: 255 LDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRI 314
           +++  R                        +L L++  G  P+  T+ +L++G+C  G +
Sbjct: 159 IEVASR------------------------MLSLVLDCGPAPNVVTFCTLINGFCKRGEM 194

Query: 315 DTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTL 374
           D A E+F  M  +G    +++Y+ LI+GY K   +     L+ Q +  GV+  V+ +++ 
Sbjct: 195 DRAFELFKVMEQRGIAPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSST 254

Query: 375 LSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKF 434
           +    + G    A  ++  M    + P++ TY ILI GLC++  + EA  ++  +     
Sbjct: 255 IDVYVKFGYLTTAFDVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGIYCQILKRGL 314

Query: 435 EFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKAND 494
           E  +  ++ LIDG CK G L + + L+  + + G  P VV Y +++ GLC++G +  A  
Sbjct: 315 EPSVVTYSSLIDGFCKYGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLCKQGLMLHALR 374

Query: 495 FLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDL 554
           F +        PNVV FN+L+ G+ + N+  + +++   M      + PD  T + ++ +
Sbjct: 375 FSVKTLGQSIRPNVVVFNSLIDGWCRLNRCDEALKVFRLMG--IYGIKPDVATITTLMRV 432

Query: 555 LAKDEKYHE 563
              + +  E
Sbjct: 433 TVMEGRLKE 441



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 70/312 (22%), Positives = 123/312 (39%), Gaps = 65/312 (20%)

Query: 49  CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
           CK G++ L+  R+    +      P +  FN L     +    D  +  +R +   G+ P
Sbjct: 364 CKQGLM-LHALRFSVKTLGQ-SIRPNVVVFNSLIDGWCRLNRCDEALKVFRLMGIYGIKP 421

Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
           D  T+  L+       R   +E R+KE  +LF  M   G+ PD + + TL++ FC+    
Sbjct: 422 DVATITTLM-------RVTVMEGRLKEGLFLFFRMFKMGLEPDAVAFCTLMDAFCKNMKP 474

Query: 169 SVALRLHKKMV--------------------------SGDYENGLIS---KTNIFSYSII 199
           ++ L+L   M                           +  + N L+    + +I +Y+ +
Sbjct: 475 TIGLQLFDLMQRNKIPADIAVCNVVINLLFKGQSVEEASKFFNNLLEGKMEPDIVTYNTM 534

Query: 200 IDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIH----------------------- 236
           I   C    +D+A  +F  +K     P  V  T LIH                       
Sbjct: 535 ICGYCSLRRLDEAARIFEMLKFTPFGPNAVTLTILIHTLCKNSDMDGALRIISPSIISYS 594

Query: 237 ----GFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQR 292
               G C  G  +E   +F + +D    P+++ + ++I   CK G++ EA  L E M++ 
Sbjct: 595 IIIDGLCKRGRVDEATNIFHQAIDAKILPDVVAYAILIRGCCKVGRLVEAALLYEHMLRN 654

Query: 293 GLNPDRFTYNSL 304
           G+ PD     +L
Sbjct: 655 GVKPDDLLQRAL 666


>gi|297816088|ref|XP_002875927.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297321765|gb|EFH52186.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 657

 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 127/482 (26%), Positives = 232/482 (48%), Gaps = 20/482 (4%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
           P +  +N +   +        +   YR +   G  P+  T N+L+       + LC  N+
Sbjct: 143 PSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLL-------KALCKNNK 195

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
           +  A  L   M   G  P+ ++Y T+I+  C  G +    +L ++            +  
Sbjct: 196 VDGAKKLLVEMSNKGCCPNAVSYTTVISSMCEVGMVKEGRQLAERF-----------EPV 244

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
           +  Y+ +I+ LCKE       EL  EM  +GI+P V+  +TLI+    +G  E    L  
Sbjct: 245 VSVYNALINGLCKERDYKGGVELMSEMVEKGISPNVISYSTLINELSNSGQIELAFSLLA 304

Query: 253 EMLDLGPRPNLLTFNVMID-CLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
           +ML  G  PN+ T + ++  C  +G   +  +   +++   GL P+   YN+L+ G+C  
Sbjct: 305 QMLKRGCHPNIHTLSSLVKGCFVRGTTFDALDMWNQMIRGFGLQPNVVAYNTLVQGFCSH 364

Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
           G ID A  +FL M   GC   + +Y  LING+ K  ++E A+ ++ +++++G    V+ Y
Sbjct: 365 GNIDKAVSVFLHMEEIGCSPNIRTYGSLINGFTKRGSLEGAVYIWNKMLTSGCCPNVVVY 424

Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
            +++  L +  +   A+ L + M   N  P + T+N  I GLC    +  A K+F  +E 
Sbjct: 425 TSMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQ 484

Query: 432 N-KFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLE 490
             +    I  +N L+DGL KA R++ A+ L  ++  +G+  +  TY+ ++HG C  G   
Sbjct: 485 QYRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSTSTYNTLLHGSCNAGLPG 544

Query: 491 KANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSI 550
            A   +  M  NG +P+ +T N ++  + +  K  + V++L  ++   R   PD  +++ 
Sbjct: 545 IALQLVGKMMVNGKSPDEITMNMIILAYCKQGKAERAVQMLDLVSCGRRKWRPDVISYTN 604

Query: 551 VV 552
           V+
Sbjct: 605 VI 606



 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 117/402 (29%), Positives = 204/402 (50%), Gaps = 15/402 (3%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
           P +S +N L   + K R Y   +    ++V  G+ P+ ++ + LIN   N         +
Sbjct: 243 PVVSVYNALINGLCKERDYKGGVELMSEMVEKGISPNVISYSTLINELSNS-------GQ 295

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
           I+ A  L   M+  G  P++ T  +L+ G    G    AL +  +M+ G    GL  + N
Sbjct: 296 IELAFSLLAQMLKRGCHPNIHTLSSLVKGCFVRGTTFDALDMWNQMIRG---FGL--QPN 350

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
           + +Y+ ++   C  G +DKA  +FL M+  G +P +    +LI+GF   G+ E    ++ 
Sbjct: 351 VVAYNTLVQGFCSHGNIDKAVSVFLHMEEIGCSPNIRTYGSLINGFTKRGSLEGAVYIWN 410

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
           +ML  G  PN++ +  M++ LC+  K  EA  L+E+M +    P   T+N+ + G C  G
Sbjct: 411 KMLTSGCCPNVVVYTSMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAG 470

Query: 313 RIDTAREIFLSMHSK-GCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
           R+D A ++F  M  +  C   +V+YN L++G  K   +EEA  L R+I   GV  +  TY
Sbjct: 471 RLDWAEKVFRQMEQQYRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSTSTY 530

Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
           NTLL G   AG  G A +L  +M +    PD  T N++I   CK    + AV++  ++  
Sbjct: 531 NTLLHGSCNAGLPGIALQLVGKMMVNGKSPDEITMNMIILAYCKQGKAERAVQMLDLVSC 590

Query: 432 NKFEFGIEI--FNCLIDGLCKAGRLDNAWELFHKLPQKGLVP 471
            + ++  ++  +  +I GLC++   ++   LF ++  + ++P
Sbjct: 591 GRRKWRPDVISYTNVIWGLCRSNCREDGVILFERMISERIIP 632



 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 109/433 (25%), Positives = 200/433 (46%), Gaps = 48/433 (11%)

Query: 207 GLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTF 266
           GL ++A E+F  +K  G +P+V +   ++         + +  ++ +M   G  PN+ T+
Sbjct: 124 GLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTY 183

Query: 267 NVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHS 326
           NV++  LCK  K++ A  LL  M  +G  P+  +Y +++   C VG +   R++     +
Sbjct: 184 NVLLKALCKNNKVDGAKKLLVEMSNKGCCPNAVSYTTVISSMCEVGMVKEGRQL-----A 238

Query: 327 KGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGY 386
           +  +  V  YN LING CK  + +  + L  +++  G+   VI+Y+TL++ L  +GQ   
Sbjct: 239 ERFEPVVSVYNALINGLCKERDYKGGVELMSEMVEKGISPNVISYSTLINELSNSGQIEL 298

Query: 387 AQKL-----------------------------FDEMKLYN-------VEPDLSTYNILI 410
           A  L                             FD + ++N       ++P++  YN L+
Sbjct: 299 AFSLLAQMLKRGCHPNIHTLSSLVKGCFVRGTTFDALDMWNQMIRGFGLQPNVVAYNTLV 358

Query: 411 DGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLV 470
            G C +  + +AV +F  +E       I  +  LI+G  K G L+ A  +++K+   G  
Sbjct: 359 QGFCSHGNIDKAVSVFLHMEEIGCSPNIRTYGSLINGFTKRGSLEGAVYIWNKMLTSGCC 418

Query: 471 PTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVEL 530
           P VV Y+ M+  LCR  K ++A   +  M K  CAP+V TFN  + G     +     ++
Sbjct: 419 PNVVVYTSMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKV 478

Query: 531 LHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKS------SYRACLYVTIFQPS 584
             +M E +    P+  T++ ++D LAK  +  E   +++        +    Y T+   S
Sbjct: 479 FRQM-EQQYRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSTSTYNTLLHGS 537

Query: 585 SLGSMIGCTVRLM 597
               + G  ++L+
Sbjct: 538 CNAGLPGIALQLV 550


>gi|125569067|gb|EAZ10582.1| hypothetical protein OsJ_00414 [Oryza sativa Japonica Group]
          Length = 1003

 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 132/503 (26%), Positives = 234/503 (46%), Gaps = 38/503 (7%)

Query: 84  AVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNM 143
           A  ++R+ D       ++ S G+    +  N+L+        GLC   R++EA  +   M
Sbjct: 207 AYCESRNLDGARGLVVRMESEGVKASAVPYNVLM-------YGLCKNMRVQEAVEVKNVM 259

Query: 144 IAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDY---------------ENGLI 188
           +  GV  D +TY TL+ GFCR   L +ALR+   M+   +               +  L+
Sbjct: 260 VNIGVTADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELV 319

Query: 189 SKT--------------NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTL 234
            +               N+F+Y+ +ID LCK    D A  LF EM GRG+ P  V    L
Sbjct: 320 EEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAIL 379

Query: 235 IHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGL 294
           IH  C  G  E+   LF +M D G +  +  +N +I+  CK G ++ A GLL  M++ GL
Sbjct: 380 IHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGL 439

Query: 295 NPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMS 354
            P   +Y+ L+ G C  G + +  E+   M  +G      ++  LING+CK   ++EA  
Sbjct: 440 TPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAAR 499

Query: 355 LYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLC 414
           L+ ++I + V    +T+N ++ G    G    A +L+D+M    ++PD  TY  LI GLC
Sbjct: 500 LFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLC 559

Query: 415 KNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVV 474
             + V +A +    LE +           L+ G  + GR    + L+ ++  +G+   +V
Sbjct: 560 LTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLV 619

Query: 475 TYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKM 534
           +++I+++   ++   EK+      M++ G  P+ + +  ++    +     + +    +M
Sbjct: 620 SFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQM 679

Query: 535 AEPERNLVPDDTTFSIVVDLLAK 557
                   P+  T +++++ L K
Sbjct: 680 VVD--GYSPNTVTHTVLINNLCK 700



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 144/513 (28%), Positives = 225/513 (43%), Gaps = 82/513 (15%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
           P + ++N L   + KN  +D     ++++   GL P+ +T  ILI+        LC    
Sbjct: 336 PNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIH-------ALCKRGM 388

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
           I++A  LF  M   G++  V  Y +LING+C+ G+L  A    + ++SG  + GL     
Sbjct: 389 IEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRA----RGLLSGMVKEGLTPTAA 444

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
             SYS +I  LC+ G +    EL  EM  RGI       T LI+GFC     +E   LF 
Sbjct: 445 --SYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFD 502

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDR-------------- 298
           +M+D    PN +TFNVMI+  C  G I +A  L + M++ GL PD               
Sbjct: 503 KMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTS 562

Query: 299 ---------------------FTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYN 337
                                F+  +L+ G+   GR      ++  M  +G K  +VS+ 
Sbjct: 563 GVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFT 622

Query: 338 ILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLY 397
           I++    K  + E++  L+R++   GV+   I Y  ++  L +      A   +D+M + 
Sbjct: 623 IIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVD 682

Query: 398 NVEPDLSTYNILIDGLCKN-------------------------NCV---------QEAV 423
              P+  T+ +LI+ LCK+                         NC           E  
Sbjct: 683 GYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKA 742

Query: 424 KLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGL 483
           K  H   +      I  FN LI GLCKAG++  A +L  K+ + G  P  ++YS +IH L
Sbjct: 743 KDLHSAMLQGHLASIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHEL 802

Query: 484 CRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMH 516
           C+ G + KA +    M   G  P+VV +N  + 
Sbjct: 803 CKMGDINKAFELWNEMLYKGLKPDVVAYNIFIR 835



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 140/519 (26%), Positives = 236/519 (45%), Gaps = 49/519 (9%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
           P  ++ + +   + K    +   S   KL  +G++P+    N LI+        LC   R
Sbjct: 301 PSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALID-------KLCKNER 353

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
             +A  LFK M   G+ P+ +TY  LI+  C+ G +  AL L  KM     + G+  K  
Sbjct: 354 FDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKM----RDKGI--KVT 407

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
           ++ Y+ +I+  CK+G +D+A+ L   M   G+ P     + LI G C  G+      L  
Sbjct: 408 VYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHR 467

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
           EM + G   N  TF  +I+  CK  K++EA  L + MI   + P+  T+N +++GYCLVG
Sbjct: 468 EMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVG 527

Query: 313 RIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYN 372
            I  A +++  M   G K    +Y  LI+G C    V +A      + ++       +  
Sbjct: 528 NIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLT 587

Query: 373 TLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMN 432
            LL G F+ G+      L+DEM +  V+ DL ++ I++    K +  +++  LF  ++  
Sbjct: 588 ALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQ 647

Query: 433 KFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKA 492
             +     + C+ID L K   +  A   + ++   G  P  VT++++I+ LC+ G L  A
Sbjct: 648 GVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSA 707

Query: 493 -------------------NDFLLY------MEK---------NGCAPNVVTFNTLMHGF 518
                              N FL Y      MEK          G   ++V+FN L+ G 
Sbjct: 708 ELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQGHLASIVSFNILIKGL 767

Query: 519 LQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAK 557
            +  K  + ++L+ K+ E      PD  ++S ++  L K
Sbjct: 768 CKAGKIQEAIDLMSKITES--GFSPDCISYSTIIHELCK 804



 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 127/442 (28%), Positives = 215/442 (48%), Gaps = 11/442 (2%)

Query: 125 RGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYE 184
           R  C    +  A  L   M + GV+   + Y  L+ G C+   +  A+ +   MV+    
Sbjct: 206 RAYCESRNLDGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVN---- 261

Query: 185 NGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNW 244
             +    +  +Y  ++   C+   ++ A  +  +M   G  P+   C+ +I         
Sbjct: 262 --IGVTADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELV 319

Query: 245 EEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSL 304
           EE   L  ++ DLG  PN+  +N +ID LCK  + ++A+ L + M  RGL P+  TY  L
Sbjct: 320 EEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAIL 379

Query: 305 MDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGV 364
           +   C  G I+ A  +F  M  KG K TV  YN LINGYCK  +++ A  L   ++  G+
Sbjct: 380 IHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGL 439

Query: 365 RQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVK 424
             T  +Y+ L++GL + G      +L  EM    +  +  T+  LI+G CK+  + EA +
Sbjct: 440 TPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAAR 499

Query: 425 LF-HMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGL 483
           LF  M++ N     +  FN +I+G C  G +  A++L+ ++ + GL P   TY  +I GL
Sbjct: 500 LFDKMIDSNVIPNEV-TFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGL 558

Query: 484 CRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVP 543
           C    + KAN+F+  +E +    N  +   L++GF +  + ++   L  +MA   R +  
Sbjct: 559 CLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMA--VRGVKL 616

Query: 544 DDTTFSIVV-DLLAKDEKYHEC 564
           D  +F+I+V   L + +K   C
Sbjct: 617 DLVSFTIIVYAALKQHDKEKSC 638



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 131/476 (27%), Positives = 221/476 (46%), Gaps = 16/476 (3%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
           N  ++  CK G  +L+ AR     M     +P  +S++ L   + +N    + +  +R++
Sbjct: 412 NSLINGYCKQG--SLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREM 469

Query: 102 VSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLING 161
              G+  +  T   LIN       G C + ++ EA  LF  MI   V P+ +T+  +I G
Sbjct: 470 AERGIAWNNYTFTALIN-------GFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEG 522

Query: 162 FCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKG 221
           +C  GN+  A +L+ +MV    E GL  K + ++Y  +I  LC    V KA E   +++ 
Sbjct: 523 YCLVGNIRKAFQLYDQMV----EMGL--KPDNYTYRSLISGLCLTSGVSKANEFVADLEN 576

Query: 222 RGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINE 281
                     T L++GF   G + E   L+ EM   G + +L++F +++    K     +
Sbjct: 577 SYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEK 636

Query: 282 ANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILIN 341
           +  L   M ++G+ PD   Y  ++D       +  A   +  M   G     V++ +LIN
Sbjct: 637 SCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLIN 696

Query: 342 GYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEP 401
             CK   +  A  L +++++  V     TYN  L      G    A+ L   M L     
Sbjct: 697 NLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAM-LQGHLA 755

Query: 402 DLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELF 461
            + ++NILI GLCK   +QEA+ L   +  + F      ++ +I  LCK G ++ A+EL+
Sbjct: 756 SIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELW 815

Query: 462 HKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHG 517
           +++  KGL P VV Y+I I      G+ +KA      M ++G  PN  T+  L+ G
Sbjct: 816 NEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSG 871



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 112/363 (30%), Positives = 187/363 (51%), Gaps = 2/363 (0%)

Query: 191 TNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGL 250
            N ++ S I+ SL K      A++LF +M   G++    V T  I  +C + N +   GL
Sbjct: 161 VNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGL 220

Query: 251 FIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCL 310
            + M   G + + + +NV++  LCK  ++ EA  +  +M+  G+  D  TY +L+ G+C 
Sbjct: 221 VVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCR 280

Query: 311 VGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVIT 370
           +  ++ A  I   M   G   +  + + +I+   K   VEEA SL  ++   G+   V  
Sbjct: 281 MEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFA 340

Query: 371 YNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLE 430
           YN L+  L +  +   A +LF EM    +EP+  TY ILI  LCK   +++A+ LF  + 
Sbjct: 341 YNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMR 400

Query: 431 MNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLE 490
               +  +  +N LI+G CK G LD A  L   + ++GL PT  +YS +I GLCR G L 
Sbjct: 401 DKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLS 460

Query: 491 KANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSI 550
              +    M + G A N  TF  L++GF ++ K  +   L  KM +   N++P++ TF++
Sbjct: 461 SCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDS--NVIPNEVTFNV 518

Query: 551 VVD 553
           +++
Sbjct: 519 MIE 521



 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 119/393 (30%), Positives = 190/393 (48%), Gaps = 6/393 (1%)

Query: 139 LFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSI 198
           LF  M+  GV  D   Y   I  +C + NL  A  L  +M S     G+  K +   Y++
Sbjct: 185 LFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLVVRMES----EGV--KASAVPYNV 238

Query: 199 IIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLG 258
           ++  LCK   V +A E+   M   G+    V   TL++GFC     E    +  +M+ LG
Sbjct: 239 LMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMALRITHDMIRLG 298

Query: 259 PRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAR 318
             P+    + MID L K   + EA  L   +   G+ P+ F YN+L+D  C   R D A 
Sbjct: 299 FVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDAD 358

Query: 319 EIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGL 378
            +F  M  +G +   V+Y ILI+  CK   +E+A+ L+ ++   G++ TV  YN+L++G 
Sbjct: 359 RLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGY 418

Query: 379 FQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGI 438
            + G    A+ L   M    + P  ++Y+ LI GLC+N  +   ++L   +      +  
Sbjct: 419 CKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNN 478

Query: 439 EIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLY 498
             F  LI+G CK  ++D A  LF K+    ++P  VT+++MI G C  G + KA      
Sbjct: 479 YTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQ 538

Query: 499 MEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELL 531
           M + G  P+  T+ +L+ G    +  SK  E +
Sbjct: 539 MVEMGLKPDNYTYRSLISGLCLTSGVSKANEFV 571



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 99/346 (28%), Positives = 166/346 (47%), Gaps = 37/346 (10%)

Query: 255 LDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRI 314
           L  G   N  T + ++  L K  +   A  L + M+Q G++ D + Y + +  YC    +
Sbjct: 155 LSSGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNL 214

Query: 315 DTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTL 374
           D AR + + M S+G K + V YN+L+ G CK + V+EA+ +   +++ GV    +TY TL
Sbjct: 215 DGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTL 274

Query: 375 LSGLFQAGQAGYAQKLFDEM-----------------KLYNVE----------------- 400
           + G  +  +   A ++  +M                 +L   E                 
Sbjct: 275 VYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGM 334

Query: 401 -PDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWE 459
            P++  YN LID LCKN    +A +LF  +     E     +  LI  LCK G +++A  
Sbjct: 335 VPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALC 394

Query: 460 LFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFL 519
           LF K+  KG+  TV  Y+ +I+G C++G L++A   L  M K G  P   +++ L+ G  
Sbjct: 395 LFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLC 454

Query: 520 QNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECS 565
           +N   S  +EL  +MA  ER +  ++ TF+ +++   KD+K  E +
Sbjct: 455 RNGDLSSCMELHREMA--ERGIAWNNYTFTALINGFCKDKKMDEAA 498



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 91/400 (22%), Positives = 173/400 (43%), Gaps = 70/400 (17%)

Query: 77  SFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEA 136
           +F  L     K++  D     + K++   ++P+ +T N++I        G C+   I++A
Sbjct: 480 TFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMI-------EGYCLVGNIRKA 532

Query: 137 TWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKM---------------VSG 181
             L+  M+  G++PD  TY +LI+G C T  +S A      +               + G
Sbjct: 533 FQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYG 592

Query: 182 DYENGLISKT--------------NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPA 227
            +  G  ++T              ++ S++II+ +  K+   +K+  LF EMK +G+ P 
Sbjct: 593 FFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPD 652

Query: 228 VVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLE 287
            +  T +I       N  +    + +M+  G  PN +T  V+I+ LCK G +  A  L +
Sbjct: 653 DIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCK 712

Query: 288 LMIQRGLNPDRFTYNSLMD----------------------------------GYCLVGR 313
            M+   + P++FTYN  +D                                  G C  G+
Sbjct: 713 EMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQGHLASIVSFNILIKGLCKAGK 772

Query: 314 IDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNT 373
           I  A ++   +   G     +SY+ +I+  CK+ ++ +A  L+ +++  G++  V+ YN 
Sbjct: 773 IQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNI 832

Query: 374 LLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGL 413
            +      G++  A  ++  M    V+P+  TY  L+ G+
Sbjct: 833 FIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSGI 872



 Score =  105 bits (261), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 75/274 (27%), Positives = 132/274 (48%), Gaps = 14/274 (5%)

Query: 77  SFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEA 136
           SF ++  A  K    +     +R++   G+ PD +    +I+    +E  +       +A
Sbjct: 620 SFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMI-------QA 672

Query: 137 TWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSY 196
              +  M+  G  P+ +T+  LIN  C++G L  A  L K+M++G+         N F+Y
Sbjct: 673 LNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNV------LPNKFTY 726

Query: 197 SIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLD 256
           +  +D    EG ++KAK+L   M  +G   ++V    LI G C AG  +E   L  ++ +
Sbjct: 727 NCFLDYFATEGDMEKAKDLHSAML-QGHLASIVSFNILIKGLCKAGKIQEAIDLMSKITE 785

Query: 257 LGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDT 316
            G  P+ ++++ +I  LCK G IN+A  L   M+ +GL PD   YN  +    + G  D 
Sbjct: 786 SGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDK 845

Query: 317 AREIFLSMHSKGCKHTVVSYNILINGYCKILNVE 350
           A  I+ +M   G +    +Y  L++G   +L+ +
Sbjct: 846 ALGIYTNMIRSGVQPNWDTYRALLSGISLMLHYD 879



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 68/254 (26%), Positives = 121/254 (47%), Gaps = 14/254 (5%)

Query: 62  FFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFG 121
            F  M      P    +  +  A++K  +    ++ + ++V  G  P+ +T  +LIN   
Sbjct: 640 LFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLIN--- 696

Query: 122 NKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSG 181
                LC    +  A  L K M+A  V P+  TY   ++ F   G++  A  LH  M+ G
Sbjct: 697 ----NLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQG 752

Query: 182 DYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCA 241
                     +I S++I+I  LCK G + +A +L  ++   G +P  +  +T+IH  C  
Sbjct: 753 HL-------ASIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKM 805

Query: 242 GNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTY 301
           G+  +   L+ EML  G +P+++ +N+ I      G+ ++A G+   MI+ G+ P+  TY
Sbjct: 806 GDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTY 865

Query: 302 NSLMDGYCLVGRID 315
            +L+ G  L+   D
Sbjct: 866 RALLSGISLMLHYD 879



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 50/210 (23%), Positives = 94/210 (44%), Gaps = 2/210 (0%)

Query: 360 ISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCV 419
           +S+G+     T + +L  L +  Q   A+ LFD+M    V  D   Y   I   C++  +
Sbjct: 155 LSSGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNL 214

Query: 420 QEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIM 479
             A  L   +E    +     +N L+ GLCK  R+  A E+ + +   G+    VTY  +
Sbjct: 215 DGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTL 274

Query: 480 IHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPER 539
           ++G CR  +LE A      M + G  P+    + ++    +     +   L  K+   + 
Sbjct: 275 VYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLG--DL 332

Query: 540 NLVPDDTTFSIVVDLLAKDEKYHECSAVSK 569
            +VP+   ++ ++D L K+E++ +   + K
Sbjct: 333 GMVPNVFAYNALIDKLCKNERFDDADRLFK 362


>gi|255556314|ref|XP_002519191.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223541506|gb|EEF43055.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 719

 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 133/523 (25%), Positives = 240/523 (45%), Gaps = 50/523 (9%)

Query: 104 IGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFC 163
           +G+ P     N +I+        L   N +  A   F+ M A   +PD  TY  LI+G C
Sbjct: 211 LGISPSTRLYNAVID-------ALVKSNSLDLAYLKFQQMSADNCKPDRFTYNILIHGVC 263

Query: 164 RTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRG 223
           R+G +  ALRL K+M       GL    N+F+Y+I+ID       VD+A  +   MK R 
Sbjct: 264 RSGVVDEALRLVKQM------EGLGYSPNVFTYTILIDGFFNAKKVDEAFRVLETMKARK 317

Query: 224 INPAVVVCTTLIHG--------------------------------FCCAGN---WEEVN 248
           ++P+     + IHG                                 CC  +     E  
Sbjct: 318 VSPSEATIRSFIHGVFRCVAPNKAFELAIEFIEREPVLQRLACDTLLCCLSSKNMAREAG 377

Query: 249 GLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGY 308
            L  +   +G +P+  TFN+ ++CL KG  +NE   +L+  +++G+     TY +L+   
Sbjct: 378 ALLKKFGKIGHKPDSATFNIAMNCLIKGFDLNEVCNILDRFVEQGMKFGFSTYLALIKAL 437

Query: 309 CLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTV 368
            + G++      F  M   G    V SYN++I+ +CK   +++A + ++++   G+   +
Sbjct: 438 YMAGKVTEGNHYFNQMVKDGLLCNVCSYNMVIDCFCKTSMMDKATNTFKEMQYKGIPPNL 497

Query: 369 ITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHM 428
           +T+NTL+ G  + G+   ++ L   +  +  +PD+ T++ +IDGLC+   +++A+  F  
Sbjct: 498 VTFNTLIDGYCKGGEICKSRDLLVMLLEHGFKPDIFTFSSIIDGLCRAKQIEDALGCFSE 557

Query: 429 LEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGK 488
           + M         +N LI  LC  G +  + +L  K+   G+ P V +++ +I   CR GK
Sbjct: 558 MVMWGLSPNAVTYNILIHSLCIIGDVPRSMKLLRKMQTDGINPDVFSFNALIQSFCRMGK 617

Query: 489 LEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTF 548
           +E A      M   G  P+  T+   +  F Q+ + ++  EL   M       +PD  T 
Sbjct: 618 VEDAKKLFSSMLSLGLIPDNYTYVAFIKVFCQSGRFNEAKELFLSME--ANGCMPDSFTC 675

Query: 549 SIVVDLLAKDEKYHECSAVSKSSYRACLYVTIFQPSSLGSMIG 591
           +I++D L K +++     ++K+     + V     S   +++G
Sbjct: 676 NIILDALVKQDQFEAAQKIAKTCSEWGILVNFAAISEDSALLG 718



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 100/327 (30%), Positives = 167/327 (51%), Gaps = 13/327 (3%)

Query: 99  RKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTL 158
           +K   IG  PD  T NI +NC     +G      + E   +    +  G++    TY  L
Sbjct: 381 KKFGKIGHKPDSATFNIAMNCL---IKGF----DLNEVCNILDRFVEQGMKFGFSTYLAL 433

Query: 159 INGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLE 218
           I      G ++       +MV    ++GL+   N+ SY+++ID  CK  ++DKA   F E
Sbjct: 434 IKALYMAGKVTEGNHYFNQMV----KDGLL--CNVCSYNMVIDCFCKTSMMDKATNTFKE 487

Query: 219 MKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGK 278
           M+ +GI P +V   TLI G+C  G   +   L + +L+ G +P++ TF+ +ID LC+  +
Sbjct: 488 MQYKGIPPNLVTFNTLIDGYCKGGEICKSRDLLVMLLEHGFKPDIFTFSSIIDGLCRAKQ 547

Query: 279 INEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNI 338
           I +A G    M+  GL+P+  TYN L+   C++G +  + ++   M + G    V S+N 
Sbjct: 548 IEDALGCFSEMVMWGLSPNAVTYNILIHSLCIIGDVPRSMKLLRKMQTDGINPDVFSFNA 607

Query: 339 LINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYN 398
           LI  +C++  VE+A  L+  ++S G+     TY   +    Q+G+   A++LF  M+   
Sbjct: 608 LIQSFCRMGKVEDAKKLFSSMLSLGLIPDNYTYVAFIKVFCQSGRFNEAKELFLSMEANG 667

Query: 399 VEPDLSTYNILIDGLCKNNCVQEAVKL 425
             PD  T NI++D L K +  + A K+
Sbjct: 668 CMPDSFTCNIILDALVKQDQFEAAQKI 694



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 102/413 (24%), Positives = 191/413 (46%), Gaps = 8/413 (1%)

Query: 151 DVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVD 210
           D    G L N   R G + +++ L K + +  Y      + N     I+I S  + GL  
Sbjct: 146 DQSVKGVLANCLYRKGPVVLSVELLKDIKASGY------RINEELLCILIGSWGRLGLAK 199

Query: 211 KAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMI 270
              E+F ++   GI+P+  +   +I     + + +     F +M     +P+  T+N++I
Sbjct: 200 YCDEIFGQISFLGISPSTRLYNAVIDALVKSNSLDLAYLKFQQMSADNCKPDRFTYNILI 259

Query: 271 DCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCK 330
             +C+ G ++EA  L++ M   G +P+ FTY  L+DG+    ++D A  +  +M ++   
Sbjct: 260 HGVCRSGVVDEALRLVKQMEGLGYSPNVFTYTILIDGFFNAKKVDEAFRVLETMKARKVS 319

Query: 331 HTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKL 390
            +  +    I+G  + +   +A  L  + I        +  +TLL  L     A  A  L
Sbjct: 320 PSEATIRSFIHGVFRCVAPNKAFELAIEFIEREPVLQRLACDTLLCCLSSKNMAREAGAL 379

Query: 391 FDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCK 450
             +      +PD +T+NI ++ L K   + E   +         +FG   +  LI  L  
Sbjct: 380 LKKFGKIGHKPDSATFNIAMNCLIKGFDLNEVCNILDRFVEQGMKFGFSTYLALIKALYM 439

Query: 451 AGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVT 510
           AG++      F+++ + GL+  V +Y+++I   C+   ++KA +    M+  G  PN+VT
Sbjct: 440 AGKVTEGNHYFNQMVKDGLLCNVCSYNMVIDCFCKTSMMDKATNTFKEMQYKGIPPNLVT 499

Query: 511 FNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
           FNTL+ G+ +  +  K  +LL  +   E    PD  TFS ++D L + ++  +
Sbjct: 500 FNTLIDGYCKGGEICKSRDLLVMLL--EHGFKPDIFTFSSIIDGLCRAKQIED 550



 Score = 47.8 bits (112), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 38/170 (22%), Positives = 76/170 (44%), Gaps = 6/170 (3%)

Query: 398 NVEP----DLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGR 453
           N++P    D S   +L + L +   V  +V+L   ++ + +    E+   LI    + G 
Sbjct: 138 NMDPLFAKDQSVKGVLANCLYRKGPVVLSVELLKDIKASGYRINEELLCILIGSWGRLGL 197

Query: 454 LDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNT 513
                E+F ++   G+ P+   Y+ +I  L +   L+ A      M  + C P+  T+N 
Sbjct: 198 AKYCDEIFGQISFLGISPSTRLYNAVIDALVKSNSLDLAYLKFQQMSADNCKPDRFTYNI 257

Query: 514 LMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
           L+HG  ++    + + L+ +M        P+  T++I++D     +K  E
Sbjct: 258 LIHGVCRSGVVDEALRLVKQME--GLGYSPNVFTYTILIDGFFNAKKVDE 305


>gi|13872949|dbj|BAB44054.1| hypothetical protein [Oryza sativa Japonica Group]
          Length = 909

 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 132/503 (26%), Positives = 234/503 (46%), Gaps = 38/503 (7%)

Query: 84  AVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNM 143
           A  ++R+ D       ++ S G+    +  N+L+        GLC   R++EA  +   M
Sbjct: 230 AYCESRNLDGARGLVVRMESEGVKASAVPYNVLM-------YGLCKNMRVQEAVEVKNVM 282

Query: 144 IAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDY---------------ENGLI 188
           +  GV  D +TY TL+ GFCR   L +ALR+   M+   +               +  L+
Sbjct: 283 VNIGVTADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELV 342

Query: 189 SKT--------------NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTL 234
            +               N+F+Y+ +ID LCK    D A  LF EM GRG+ P  V    L
Sbjct: 343 EEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAIL 402

Query: 235 IHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGL 294
           IH  C  G  E+   LF +M D G +  +  +N +I+  CK G ++ A GLL  M++ GL
Sbjct: 403 IHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGL 462

Query: 295 NPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMS 354
            P   +Y+ L+ G C  G + +  E+   M  +G      ++  LING+CK   ++EA  
Sbjct: 463 TPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAAR 522

Query: 355 LYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLC 414
           L+ ++I + V    +T+N ++ G    G    A +L+D+M    ++PD  TY  LI GLC
Sbjct: 523 LFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLC 582

Query: 415 KNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVV 474
             + V +A +    LE +           L+ G  + GR    + L+ ++  +G+   +V
Sbjct: 583 LTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLV 642

Query: 475 TYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKM 534
           +++I+++   ++   EK+      M++ G  P+ + +  ++    +     + +    +M
Sbjct: 643 SFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQM 702

Query: 535 AEPERNLVPDDTTFSIVVDLLAK 557
                   P+  T +++++ L K
Sbjct: 703 VVD--GYSPNTVTHTVLINNLCK 723



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 144/513 (28%), Positives = 225/513 (43%), Gaps = 82/513 (15%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
           P + ++N L   + KN  +D     ++++   GL P+ +T  ILI+        LC    
Sbjct: 359 PNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIH-------ALCKRGM 411

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
           I++A  LF  M   G++  V  Y +LING+C+ G+L  A    + ++SG  + GL     
Sbjct: 412 IEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRA----RGLLSGMVKEGLTPTAA 467

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
             SYS +I  LC+ G +    EL  EM  RGI       T LI+GFC     +E   LF 
Sbjct: 468 --SYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFD 525

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDR-------------- 298
           +M+D    PN +TFNVMI+  C  G I +A  L + M++ GL PD               
Sbjct: 526 KMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTS 585

Query: 299 ---------------------FTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYN 337
                                F+  +L+ G+   GR      ++  M  +G K  +VS+ 
Sbjct: 586 GVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFT 645

Query: 338 ILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLY 397
           I++    K  + E++  L+R++   GV+   I Y  ++  L +      A   +D+M + 
Sbjct: 646 IIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVD 705

Query: 398 NVEPDLSTYNILIDGLCKN-------------------------NCV---------QEAV 423
              P+  T+ +LI+ LCK+                         NC           E  
Sbjct: 706 GYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKA 765

Query: 424 KLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGL 483
           K  H   +      I  FN LI GLCKAG++  A +L  K+ + G  P  ++YS +IH L
Sbjct: 766 KDLHSAMLQGHLASIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHEL 825

Query: 484 CRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMH 516
           C+ G + KA +    M   G  P+VV +N  + 
Sbjct: 826 CKMGDINKAFELWNEMLYKGLKPDVVAYNIFIR 858



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 140/519 (26%), Positives = 236/519 (45%), Gaps = 49/519 (9%)

Query: 73  PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
           P  ++ + +   + K    +   S   KL  +G++P+    N LI+        LC   R
Sbjct: 324 PSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALID-------KLCKNER 376

Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
             +A  LFK M   G+ P+ +TY  LI+  C+ G +  AL L  KM     + G+  K  
Sbjct: 377 FDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKM----RDKGI--KVT 430

Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
           ++ Y+ +I+  CK+G +D+A+ L   M   G+ P     + LI G C  G+      L  
Sbjct: 431 VYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHR 490

Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
           EM + G   N  TF  +I+  CK  K++EA  L + MI   + P+  T+N +++GYCLVG
Sbjct: 491 EMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVG 550

Query: 313 RIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYN 372
            I  A +++  M   G K    +Y  LI+G C    V +A      + ++       +  
Sbjct: 551 NIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLT 610

Query: 373 TLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMN 432
            LL G F+ G+      L+DEM +  V+ DL ++ I++    K +  +++  LF  ++  
Sbjct: 611 ALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQ 670

Query: 433 KFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKA 492
             +     + C+ID L K   +  A   + ++   G  P  VT++++I+ LC+ G L  A
Sbjct: 671 GVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSA 730

Query: 493 -------------------NDFLLY------MEK---------NGCAPNVVTFNTLMHGF 518
                              N FL Y      MEK          G   ++V+FN L+ G 
Sbjct: 731 ELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQGHLASIVSFNILIKGL 790

Query: 519 LQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAK 557
            +  K  + ++L+ K+ E      PD  ++S ++  L K
Sbjct: 791 CKAGKIQEAIDLMSKITES--GFSPDCISYSTIIHELCK 827



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 127/442 (28%), Positives = 215/442 (48%), Gaps = 11/442 (2%)

Query: 125 RGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYE 184
           R  C    +  A  L   M + GV+   + Y  L+ G C+   +  A+ +   MV+    
Sbjct: 229 RAYCESRNLDGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVN---- 284

Query: 185 NGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNW 244
             +    +  +Y  ++   C+   ++ A  +  +M   G  P+   C+ +I         
Sbjct: 285 --IGVTADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELV 342

Query: 245 EEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSL 304
           EE   L  ++ DLG  PN+  +N +ID LCK  + ++A+ L + M  RGL P+  TY  L
Sbjct: 343 EEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAIL 402

Query: 305 MDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGV 364
           +   C  G I+ A  +F  M  KG K TV  YN LINGYCK  +++ A  L   ++  G+
Sbjct: 403 IHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGL 462

Query: 365 RQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVK 424
             T  +Y+ L++GL + G      +L  EM    +  +  T+  LI+G CK+  + EA +
Sbjct: 463 TPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAAR 522

Query: 425 LF-HMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGL 483
           LF  M++ N     +  FN +I+G C  G +  A++L+ ++ + GL P   TY  +I GL
Sbjct: 523 LFDKMIDSNVIPNEV-TFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGL 581

Query: 484 CRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVP 543
           C    + KAN+F+  +E +    N  +   L++GF +  + ++   L  +MA   R +  
Sbjct: 582 CLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMA--VRGVKL 639

Query: 544 DDTTFSIVV-DLLAKDEKYHEC 564
           D  +F+I+V   L + +K   C
Sbjct: 640 DLVSFTIIVYAALKQHDKEKSC 661



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 131/476 (27%), Positives = 221/476 (46%), Gaps = 16/476 (3%)

Query: 42  NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
           N  ++  CK G  +L+ AR     M     +P  +S++ L   + +N    + +  +R++
Sbjct: 435 NSLINGYCKQG--SLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREM 492

Query: 102 VSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLING 161
              G+  +  T   LIN       G C + ++ EA  LF  MI   V P+ +T+  +I G
Sbjct: 493 AERGIAWNNYTFTALIN-------GFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEG 545

Query: 162 FCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKG 221
           +C  GN+  A +L+ +MV    E GL  K + ++Y  +I  LC    V KA E   +++ 
Sbjct: 546 YCLVGNIRKAFQLYDQMV----EMGL--KPDNYTYRSLISGLCLTSGVSKANEFVADLEN 599

Query: 222 RGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINE 281
                     T L++GF   G + E   L+ EM   G + +L++F +++    K     +
Sbjct: 600 SYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEK 659

Query: 282 ANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILIN 341
           +  L   M ++G+ PD   Y  ++D       +  A   +  M   G     V++ +LIN
Sbjct: 660 SCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLIN 719

Query: 342 GYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEP 401
             CK   +  A  L +++++  V     TYN  L      G    A+ L   M L     
Sbjct: 720 NLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAM-LQGHLA 778

Query: 402 DLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELF 461
            + ++NILI GLCK   +QEA+ L   +  + F      ++ +I  LCK G ++ A+EL+
Sbjct: 779 SIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELW 838

Query: 462 HKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHG 517
           +++  KGL P VV Y+I I      G+ +KA      M ++G  PN  T+  L+ G
Sbjct: 839 NEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSG 894



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 112/362 (30%), Positives = 187/362 (51%), Gaps = 2/362 (0%)

Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
           N ++ S I+ SL K      A++LF +M   G++    V T  I  +C + N +   GL 
Sbjct: 185 NQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLV 244

Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
           + M   G + + + +NV++  LCK  ++ EA  +  +M+  G+  D  TY +L+ G+C +
Sbjct: 245 VRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRM 304

Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
             ++ A  I   M   G   +  + + +I+   K   VEEA SL  ++   G+   V  Y
Sbjct: 305 EELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAY 364

Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
           N L+  L +  +   A +LF EM    +EP+  TY ILI  LCK   +++A+ LF  +  
Sbjct: 365 NALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRD 424

Query: 432 NKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEK 491
              +  +  +N LI+G CK G LD A  L   + ++GL PT  +YS +I GLCR G L  
Sbjct: 425 KGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSS 484

Query: 492 ANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIV 551
             +    M + G A N  TF  L++GF ++ K  +   L  KM +   N++P++ TF+++
Sbjct: 485 CMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDS--NVIPNEVTFNVM 542

Query: 552 VD 553
           ++
Sbjct: 543 IE 544



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 119/393 (30%), Positives = 190/393 (48%), Gaps = 6/393 (1%)

Query: 139 LFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSI 198
           LF  M+  GV  D   Y   I  +C + NL  A  L  +M S     G+  K +   Y++
Sbjct: 208 LFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLVVRMES----EGV--KASAVPYNV 261

Query: 199 IIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLG 258
           ++  LCK   V +A E+   M   G+    V   TL++GFC     E    +  +M+ LG
Sbjct: 262 LMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMALRITHDMIRLG 321

Query: 259 PRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAR 318
             P+    + MID L K   + EA  L   +   G+ P+ F YN+L+D  C   R D A 
Sbjct: 322 FVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDAD 381

Query: 319 EIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGL 378
            +F  M  +G +   V+Y ILI+  CK   +E+A+ L+ ++   G++ TV  YN+L++G 
Sbjct: 382 RLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGY 441

Query: 379 FQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGI 438
            + G    A+ L   M    + P  ++Y+ LI GLC+N  +   ++L   +      +  
Sbjct: 442 CKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNN 501

Query: 439 EIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLY 498
             F  LI+G CK  ++D A  LF K+    ++P  VT+++MI G C  G + KA      
Sbjct: 502 YTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQ 561

Query: 499 MEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELL 531
           M + G  P+  T+ +L+ G    +  SK  E +
Sbjct: 562 MVEMGLKPDNYTYRSLISGLCLTSGVSKANEFV 594



 Score =  144 bits (364), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 99/346 (28%), Positives = 166/346 (47%), Gaps = 37/346 (10%)

Query: 255 LDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRI 314
           L  G   N  T + ++  L K  +   A  L + M+Q G++ D + Y + +  YC    +
Sbjct: 178 LSSGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNL 237

Query: 315 DTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTL 374
           D AR + + M S+G K + V YN+L+ G CK + V+EA+ +   +++ GV    +TY TL
Sbjct: 238 DGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTL 297

Query: 375 LSGLFQAGQAGYAQKLFDEM-----------------KLYNVE----------------- 400
           + G  +  +   A ++  +M                 +L   E                 
Sbjct: 298 VYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGM 357

Query: 401 -PDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWE 459
            P++  YN LID LCKN    +A +LF  +     E     +  LI  LCK G +++A  
Sbjct: 358 VPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALC 417

Query: 460 LFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFL 519
           LF K+  KG+  TV  Y+ +I+G C++G L++A   L  M K G  P   +++ L+ G  
Sbjct: 418 LFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLC 477

Query: 520 QNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECS 565
           +N   S  +EL  +MA  ER +  ++ TF+ +++   KD+K  E +
Sbjct: 478 RNGDLSSCMELHREMA--ERGIAWNNYTFTALINGFCKDKKMDEAA 521



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 91/400 (22%), Positives = 173/400 (43%), Gaps = 70/400 (17%)

Query: 77  SFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEA 136
           +F  L     K++  D     + K++   ++P+ +T N++I        G C+   I++A
Sbjct: 503 TFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMI-------EGYCLVGNIRKA 555

Query: 137 TWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKM---------------VSG 181
             L+  M+  G++PD  TY +LI+G C T  +S A      +               + G
Sbjct: 556 FQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYG 615

Query: 182 DYENGLISKT--------------NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPA 227
            +  G  ++T              ++ S++II+ +  K+   +K+  LF EMK +G+ P 
Sbjct: 616 FFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPD 675

Query: 228 VVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLE 287
            +  T +I       N  +    + +M+  G  PN +T  V+I+ LCK G +  A  L +
Sbjct: 676 DIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCK 735

Query: 288 LMIQRGLNPDRFTYNSLMD----------------------------------GYCLVGR 313
            M+   + P++FTYN  +D                                  G C  G+
Sbjct: 736 EMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQGHLASIVSFNILIKGLCKAGK 795

Query: 314 IDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNT 373
           I  A ++   +   G     +SY+ +I+  CK+ ++ +A  L+ +++  G++  V+ YN 
Sbjct: 796 IQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNI 855

Query: 374 LLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGL 413
            +      G++  A  ++  M    V+P+  TY  L+ G+
Sbjct: 856 FIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSGI 895



 Score =  105 bits (261), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 76/279 (27%), Positives = 135/279 (48%), Gaps = 14/279 (5%)

Query: 77  SFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEA 136
           SF ++  A  K    +     +R++   G+ PD +    +I+    +E  +       +A
Sbjct: 643 SFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMI-------QA 695

Query: 137 TWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSY 196
              +  M+  G  P+ +T+  LIN  C++G L  A  L K+M++G+         N F+Y
Sbjct: 696 LNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNV------LPNKFTY 749

Query: 197 SIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLD 256
           +  +D    EG ++KAK+L   M  +G   ++V    LI G C AG  +E   L  ++ +
Sbjct: 750 NCFLDYFATEGDMEKAKDLHSAML-QGHLASIVSFNILIKGLCKAGKIQEAIDLMSKITE 808

Query: 257 LGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDT 316
            G  P+ ++++ +I  LCK G IN+A  L   M+ +GL PD   YN  +    + G  D 
Sbjct: 809 SGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDK 868

Query: 317 AREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSL 355
           A  I+ +M   G +    +Y  L++G   +++  +A+ L
Sbjct: 869 ALGIYTNMIRSGVQPNWDTYRALLSGISLMVSKGQALLL 907



 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 67/250 (26%), Positives = 120/250 (48%), Gaps = 14/250 (5%)

Query: 62  FFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFG 121
            F  M      P    +  +  A++K  +    ++ + ++V  G  P+ +T  +LIN   
Sbjct: 663 LFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLIN--- 719

Query: 122 NKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSG 181
                LC    +  A  L K M+A  V P+  TY   ++ F   G++  A  LH  M+ G
Sbjct: 720 ----NLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQG 775

Query: 182 DYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCA 241
                     +I S++I+I  LCK G + +A +L  ++   G +P  +  +T+IH  C  
Sbjct: 776 HL-------ASIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKM 828

Query: 242 GNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTY 301
           G+  +   L+ EML  G +P+++ +N+ I      G+ ++A G+   MI+ G+ P+  TY
Sbjct: 829 GDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTY 888

Query: 302 NSLMDGYCLV 311
            +L+ G  L+
Sbjct: 889 RALLSGISLM 898



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 50/210 (23%), Positives = 94/210 (44%), Gaps = 2/210 (0%)

Query: 360 ISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCV 419
           +S+G+     T + +L  L +  Q   A+ LFD+M    V  D   Y   I   C++  +
Sbjct: 178 LSSGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNL 237

Query: 420 QEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIM 479
             A  L   +E    +     +N L+ GLCK  R+  A E+ + +   G+    VTY  +
Sbjct: 238 DGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTL 297

Query: 480 IHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPER 539
           ++G CR  +LE A      M + G  P+    + ++    +     +   L  K+   + 
Sbjct: 298 VYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLG--DL 355

Query: 540 NLVPDDTTFSIVVDLLAKDEKYHECSAVSK 569
            +VP+   ++ ++D L K+E++ +   + K
Sbjct: 356 GMVPNVFAYNALIDKLCKNERFDDADRLFK 385


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.323    0.140    0.420 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,689,365,658
Number of Sequences: 23463169
Number of extensions: 406954827
Number of successful extensions: 1115150
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 7851
Number of HSP's successfully gapped in prelim test: 4963
Number of HSP's that attempted gapping in prelim test: 803909
Number of HSP's gapped (non-prelim): 81355
length of query: 626
length of database: 8,064,228,071
effective HSP length: 149
effective length of query: 477
effective length of database: 8,863,183,186
effective search space: 4227738379722
effective search space used: 4227738379722
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 80 (35.4 bits)