BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 040279
(626 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P0C7Q7|PPR38_ARATH Putative pentatricopeptide repeat-containing protein At1g12700,
mitochondrial OS=Arabidopsis thaliana GN=At1g12700 PE=3
SV=1
Length = 602
Score = 383 bits (984), Expect = e-105, Method: Compositional matrix adjust.
Identities = 203/570 (35%), Positives = 328/570 (57%), Gaps = 43/570 (7%)
Query: 21 LSSLFKS-PRQIAAVSSPETQLNEFLHENCKSGIINL--NEARYFFGYMTHMQPSPPISS 77
+SS F S R +++S+ N E +SGI+++ ++A F M +P P +
Sbjct: 35 ISSFFSSCERDFSSISNG----NVCFRERLRSGIVDIKKDDAIALFQEMIRSRPLPSLVD 90
Query: 78 FNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCF----------------- 120
F+ F A+A+ + ++ V+ F ++L G+ + TLNI+INCF
Sbjct: 91 FSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVM 150
Query: 121 -----------GNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLS 169
+GL +E ++ EA L M+ G +PDV+TY +++NG CR+G+ S
Sbjct: 151 KLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTS 210
Query: 170 VALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVV 229
+AL L +KM + K ++F+YS IIDSLC++G +D A LF EM+ +GI +VV
Sbjct: 211 LALDLLRKMEERNV------KADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVV 264
Query: 230 VCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELM 289
+L+ G C AG W + L +M+ PN++TFNV++D K GK+ EAN L + M
Sbjct: 265 TYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEM 324
Query: 290 IQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNV 349
I RG++P+ TYN+LMDGYC+ R+ A + M C +V++ LI GYC + V
Sbjct: 325 ITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRV 384
Query: 350 EEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNIL 409
++ M ++R I G+ +TY+ L+ G Q+G+ A++LF EM + V PD+ TY IL
Sbjct: 385 DDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGIL 444
Query: 410 IDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGL 469
+DGLC N +++A+++F L+ +K + GI ++ +I+G+CK G++++AW LF LP KG+
Sbjct: 445 LDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGV 504
Query: 470 VPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVE 529
P V+TY++MI GLC+KG L +AN L ME++G APN T+NTL+ L++ + +
Sbjct: 505 KPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAK 564
Query: 530 LLHKMAEPERNLVPDDTTFSIVVDLLAKDE 559
L+ +M D ++ +V+D+L E
Sbjct: 565 LIEEMKSC--GFSADASSIKMVIDMLLSGE 592
Score = 106 bits (265), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 123/255 (48%), Gaps = 2/255 (0%)
Query: 315 DTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTL 374
D A +F M ++V ++ + + + +Q+ NG+ + T N +
Sbjct: 70 DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIM 129
Query: 375 LSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKF 434
++ + + +A + ++ EPD +T+N LI GL V EAV L + N
Sbjct: 130 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGC 189
Query: 435 EFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKAND 494
+ + +N +++G+C++G A +L K+ ++ + V TYS +I LCR G ++ A
Sbjct: 190 QPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAIS 249
Query: 495 FLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDL 554
ME G +VVT+N+L+ G + K + LL M R +VP+ TF++++D+
Sbjct: 250 LFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVS--REIVPNVITFNVLLDV 307
Query: 555 LAKDEKYHECSAVSK 569
K+ K E + + K
Sbjct: 308 FVKEGKLQEANELYK 322
>sp|Q9LQ14|PPR96_ARATH Pentatricopeptide repeat-containing protein At1g62930,
chloroplastic OS=Arabidopsis thaliana GN=At1g62930 PE=2
SV=2
Length = 629
Score = 365 bits (936), Expect = e-100, Method: Compositional matrix adjust.
Identities = 205/565 (36%), Positives = 309/565 (54%), Gaps = 71/565 (12%)
Query: 54 INLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVIS----------------- 96
+ L++A FG M +P P I FN L A+AK +D VIS
Sbjct: 59 LKLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSY 118
Query: 97 ------FYR------------KLVSIGLLPDFLTLNILINCFGNKER------------- 125
F R K++ +G PD +TL+ L+N + + +R
Sbjct: 119 NILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFV 178
Query: 126 ---------------GLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSV 170
GL + N+ EA L M+A G +PD+ TYGT++NG C+ G++ +
Sbjct: 179 MEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDL 238
Query: 171 ALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVV 230
AL L KKM G E ++ Y+ IID+LC V+ A LF EM +GI P VV
Sbjct: 239 ALSLLKKMEKGKIE------ADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVT 292
Query: 231 CTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMI 290
+LI C G W + + L +M++ PN++TF+ +ID K GK+ EA L + MI
Sbjct: 293 YNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMI 352
Query: 291 QRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVE 350
+R ++PD FTY+SL++G+C+ R+D A+ +F M SK C VV+YN LI G+CK VE
Sbjct: 353 KRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVE 412
Query: 351 EAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILI 410
E M L+R++ G+ +TYNTL+ GLFQAG AQK+F +M V PD+ TY+IL+
Sbjct: 413 EGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILL 472
Query: 411 DGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLV 470
DGLCK +++A+ +F L+ +K E I +N +I+G+CKAG++++ W+LF L KG+
Sbjct: 473 DGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVK 532
Query: 471 PTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVEL 530
P V+ Y+ MI G CRKG E+A+ M+++G PN T+NTL+ L++ + EL
Sbjct: 533 PNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAEL 592
Query: 531 LHKMAEPERNLVPDDTTFSIVVDLL 555
+ +M V D +T S+V+++L
Sbjct: 593 IKEMRSC--GFVGDASTISMVINML 615
Score = 214 bits (545), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 125/433 (28%), Positives = 220/433 (50%), Gaps = 8/433 (1%)
Query: 125 RGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYE 184
R + ++ ++ +A LF M+ P ++ + L++ + + + L ++M +
Sbjct: 53 RNVLLDLKLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERM-----Q 107
Query: 185 NGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNW 244
N IS +++SY+I+I+ C+ + A + +M G P +V ++L++G+C
Sbjct: 108 NLRIS-YDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRI 166
Query: 245 EEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSL 304
E L +M + +PN +TFN +I L K +EA L++ M+ RG PD FTY ++
Sbjct: 167 SEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTV 226
Query: 305 MDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGV 364
++G C G ID A + M + VV Y +I+ C NV +A++L+ ++ + G+
Sbjct: 227 VNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGI 286
Query: 365 RQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVK 424
R V+TYN+L+ L G+ A +L +M + P++ T++ LID K + EA K
Sbjct: 287 RPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEK 346
Query: 425 LFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLC 484
L+ + + I ++ LI+G C RLD A +F + K P VVTY+ +I G C
Sbjct: 347 LYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFC 406
Query: 485 RKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPD 544
+ ++E+ + M + G N VT+NTL+ G Q ++ KM + PD
Sbjct: 407 KAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSD--GVPPD 464
Query: 545 DTTFSIVVDLLAK 557
T+SI++D L K
Sbjct: 465 IITYSILLDGLCK 477
Score = 126 bits (316), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 88/323 (27%), Positives = 152/323 (47%), Gaps = 7/323 (2%)
Query: 264 LTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLS 323
L+ NV++D K+++A L M+Q P +N L+ + + D +
Sbjct: 51 LSRNVLLDL-----KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGER 105
Query: 324 MHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQ 383
M + + + SYNILIN +C+ + A+++ +++ G ++T ++LL+G +
Sbjct: 106 MQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKR 165
Query: 384 AGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNC 443
A L D+M + +P+ T+N LI GL +N EAV L + + + +
Sbjct: 166 ISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGT 225
Query: 444 LIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNG 503
+++GLCK G +D A L K+ + + VV Y+ +I LC + A + M+ G
Sbjct: 226 VVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKG 285
Query: 504 CAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
PNVVT+N+L+ + S LL M E R + P+ TFS ++D K+ K E
Sbjct: 286 IRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIE--RKINPNVVTFSALIDAFVKEGKLVE 343
Query: 564 CSAVSKSSYRACLYVTIFQPSSL 586
+ + + IF SSL
Sbjct: 344 AEKLYDEMIKRSIDPDIFTYSSL 366
Score = 82.0 bits (201), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 107/250 (42%), Gaps = 36/250 (14%)
Query: 56 LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNI 115
L+EA++ F M P + ++N L K + + + +R++ GL+ + +T N
Sbjct: 376 LDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNT 435
Query: 116 LINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRL- 174
LI +GL A +FK M++ GV PD+ITY L++G C+ G L AL +
Sbjct: 436 LI-------QGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVF 488
Query: 175 --------------HKKMVSGDYENGLIS--------------KTNIFSYSIIIDSLCKE 206
+ M+ G + G + K N+ Y+ +I C++
Sbjct: 489 EYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRK 548
Query: 207 GLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTF 266
GL ++A LF EMK G P TLI G+ L EM G + T
Sbjct: 549 GLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTI 608
Query: 267 NVMIDCLCKG 276
+++I+ L G
Sbjct: 609 SMVINMLHDG 618
>sp|Q9ASZ8|PPR37_ARATH Pentatricopeptide repeat-containing protein At1g12620
OS=Arabidopsis thaliana GN=At1g12620 PE=2 SV=1
Length = 621
Score = 363 bits (931), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 203/587 (34%), Positives = 317/587 (54%), Gaps = 63/587 (10%)
Query: 29 RQIAAVSSPETQLNEFLHENCKSGIINLNE--ARYFFGYMTHMQPSPPISSFNLLFGAVA 86
R ++VS + +++ E +SGI+++ E A F MT +P P + F+ LF VA
Sbjct: 26 RVFSSVSDGKGKVS--YRERLRSGIVDIKEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVA 83
Query: 87 KNRHYDAVISFYRKLVSIGLLPDFLTLNILINC--------------------------- 119
+ + YD V+ +++ G+ + TL+I+INC
Sbjct: 84 RTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTV 143
Query: 120 -FGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKM 178
F GLC+E R+ EA L M+ G +P +IT L+NG C G +S A+ L +M
Sbjct: 144 TFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRM 203
Query: 179 VSGDYENGLIS-----------------------------KTNIFSYSIIIDSLCKEGLV 209
V ++ ++ K + YSIIID LCK+G +
Sbjct: 204 VETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSL 263
Query: 210 DKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVM 269
D A LF EM+ +G +++ TTLI GFC AG W++ L +M+ P+++ F+ +
Sbjct: 264 DNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSAL 323
Query: 270 IDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGC 329
IDC K GK+ EA L + MIQRG++PD TY SL+DG+C ++D A + M SKGC
Sbjct: 324 IDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGC 383
Query: 330 KHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQK 389
+ ++NILINGYCK +++ + L+R++ GV +TYNTL+ G + G+ A++
Sbjct: 384 GPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKE 443
Query: 390 LFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLC 449
LF EM V PD+ +Y IL+DGLC N ++A+++F +E +K E I I+N +I G+C
Sbjct: 444 LFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMC 503
Query: 450 KAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVV 509
A ++D+AW+LF LP KG+ P V TY+IMI GLC+KG L +A+ ME++G +PN
Sbjct: 504 NASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGC 563
Query: 510 TFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLA 556
T+N L+ L +K +L+ ++ D +T +VVD+L+
Sbjct: 564 TYNILIRAHLGEGDATKSAKLIEEIKRC--GFSVDASTVKMVVDMLS 608
Score = 125 bits (314), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 138/293 (47%), Gaps = 2/293 (0%)
Query: 278 KINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYN 337
K ++A L + M + P ++ L + D ++ M KG H + + +
Sbjct: 52 KEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLS 111
Query: 338 ILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLY 397
I+IN C+ + A S +II G +T++TL++GL G+ A +L D M
Sbjct: 112 IMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEM 171
Query: 398 NVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNA 457
+P L T N L++GLC N V +AV L + F+ + ++ +CK+G+ A
Sbjct: 172 GHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALA 231
Query: 458 WELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHG 517
EL K+ ++ + V YSI+I GLC+ G L+ A + ME G +++ + TL+ G
Sbjct: 232 MELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRG 291
Query: 518 FLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKS 570
F + +LL M +R + PD FS ++D K+ K E + K
Sbjct: 292 FCYAGRWDDGAKLLRDMI--KRKITPDVVAFSALIDCFVKEGKLREAEELHKE 342
Score = 80.9 bits (198), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 118/275 (42%), Gaps = 47/275 (17%)
Query: 36 SPETQ-----LNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRH 90
SP+T ++ F EN L++A + M P I +FN+L K
Sbjct: 349 SPDTVTYTSLIDGFCKEN------QLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANL 402
Query: 91 YDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRP 150
D + +RK+ G++ D +T N LI +G C +++ A LF+ M++ VRP
Sbjct: 403 IDDGLELFRKMSLRGVVADTVTYNTLI-------QGFCELGKLEVAKELFQEMVSRRVRP 455
Query: 151 DVITYGTLINGFCRTGNLSVALRLHKKMVSGDYE----------NGLIS----------- 189
D+++Y L++G C G AL + +K+ E +G+ +
Sbjct: 456 DIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLF 515
Query: 190 --------KTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCA 241
K ++ +Y+I+I LCK+G + +A LF +M+ G +P LI
Sbjct: 516 CSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGE 575
Query: 242 GNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKG 276
G+ + L E+ G + T +++D L G
Sbjct: 576 GDATKSAKLIEEIKRCGFSVDASTVKMVVDMLSDG 610
>sp|Q6NQ83|PP247_ARATH Pentatricopeptide repeat-containing protein At3g22470,
mitochondrial OS=Arabidopsis thaliana GN=At3g22470 PE=2
SV=1
Length = 619
Score = 361 bits (927), Expect = 8e-99, Method: Compositional matrix adjust.
Identities = 203/570 (35%), Positives = 307/570 (53%), Gaps = 61/570 (10%)
Query: 46 HENCKSGIINL--NEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVS 103
E ++GI+++ N+A F M +P P FN L AVA+ + YD V+ F + +
Sbjct: 39 KERLRNGIVDIKVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMEL 98
Query: 104 IGLLPDFLTLNILINCFGNKER----------------------------GLCVENRIKE 135
G+ D T+ I+INC+ K++ G C+E R+ E
Sbjct: 99 NGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSE 158
Query: 136 ATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLIS------ 189
A L M+ RPD++T TLING C G +S AL L +MV ++ ++
Sbjct: 159 AVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLN 218
Query: 190 -----------------------KTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINP 226
K ++ YSI+IDSLCK+G D A LF EM+ +GI
Sbjct: 219 RLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKA 278
Query: 227 AVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLL 286
VV ++LI G C G W++ + EM+ P+++TF+ +ID K GK+ EA L
Sbjct: 279 DVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELY 338
Query: 287 ELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKI 346
MI RG+ PD TYNSL+DG+C + A ++F M SKGC+ +V+Y+ILIN YCK
Sbjct: 339 NEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKA 398
Query: 347 LNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTY 406
V++ M L+R+I S G+ ITYNTL+ G Q+G+ A++LF EM V P + TY
Sbjct: 399 KRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTY 458
Query: 407 NILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQ 466
IL+DGLC N + +A+++F ++ ++ GI I+N +I G+C A ++D+AW LF L
Sbjct: 459 GILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSD 518
Query: 467 KGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSK 526
KG+ P VVTY++MI GLC+KG L +A+ M+++GC P+ T+N L+ L +
Sbjct: 519 KGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLIS 578
Query: 527 VVELLHKMAEPERNLVPDDTTFSIVVDLLA 556
VEL+ +M D +T +V+D+L+
Sbjct: 579 SVELIEEMKVC--GFSADSSTIKMVIDMLS 606
Score = 162 bits (411), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 94/330 (28%), Positives = 176/330 (53%), Gaps = 14/330 (4%)
Query: 234 LIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRG 293
L+ GFC E+NG+ ++ T +MI+C C+ K+ A +L + G
Sbjct: 88 LVLGFC---KGMELNGI---------EHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLG 135
Query: 294 LNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAM 353
PD T+++L++G+CL GR+ A + M + +V+ + LING C V EA+
Sbjct: 136 YEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEAL 195
Query: 354 SLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGL 413
L +++ G + +TY +L+ L ++G + A LF +M+ N++ + Y+I+ID L
Sbjct: 196 VLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSL 255
Query: 414 CKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTV 473
CK+ +A+ LF+ +EM + + ++ LI GLC G+ D+ ++ ++ + ++P V
Sbjct: 256 CKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDV 315
Query: 474 VTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHK 533
VT+S +I ++GKL +A + M G AP+ +T+N+L+ GF + N + ++
Sbjct: 316 VTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDL 375
Query: 534 MAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
M + PD T+SI+++ K ++ +
Sbjct: 376 MV--SKGCEPDIVTYSILINSYCKAKRVDD 403
Score = 148 bits (374), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 91/314 (28%), Positives = 158/314 (50%), Gaps = 2/314 (0%)
Query: 250 LFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYC 309
LF M+ P P + FN + + + + + G + M G+ D +T +++ YC
Sbjct: 57 LFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYC 116
Query: 310 LVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVI 369
++ A + G + ++++ L+NG+C V EA++L +++ R ++
Sbjct: 117 RKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLV 176
Query: 370 TYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHML 429
T +TL++GL G+ A L D M Y +PD TY +++ LCK+ A+ LF +
Sbjct: 177 TVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKM 236
Query: 430 EMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKL 489
E + + ++ +ID LCK G D+A LF+++ KG+ VVTYS +I GLC GK
Sbjct: 237 EERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKW 296
Query: 490 EKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFS 549
+ L M P+VVTF+ L+ F++ K + EL ++M R + PD T++
Sbjct: 297 DDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMI--TRGIAPDTITYN 354
Query: 550 IVVDLLAKDEKYHE 563
++D K+ HE
Sbjct: 355 SLIDGFCKENCLHE 368
Score = 132 bits (333), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 87/286 (30%), Positives = 138/286 (48%), Gaps = 2/286 (0%)
Query: 278 KINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYN 337
K+N+A L E MIQ P +N L + D M G +H + +
Sbjct: 50 KVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMT 109
Query: 338 ILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLY 397
I+IN YC+ + A S+ + G IT++TL++G G+ A L D M
Sbjct: 110 IMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEM 169
Query: 398 NVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNA 457
PDL T + LI+GLC V EA+ L + F+ + +++ LCK+G A
Sbjct: 170 KQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALA 229
Query: 458 WELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHG 517
+LF K+ ++ + +VV YSI+I LC+ G + A ME G +VVT+++L+ G
Sbjct: 230 LDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGG 289
Query: 518 FLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
+ K ++L +M RN++PD TFS ++D+ K+ K E
Sbjct: 290 LCNDGKWDDGAKMLREMI--GRNIIPDVVTFSALIDVFVKEGKLLE 333
Score = 34.7 bits (78), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/76 (25%), Positives = 34/76 (44%), Gaps = 2/76 (2%)
Query: 42 NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
N +H C + +++A F ++ P + ++N++ G + K +RK+
Sbjct: 494 NIIIHGMCNAS--KVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKM 551
Query: 102 VSIGLLPDFLTLNILI 117
G PD T NILI
Sbjct: 552 KEDGCTPDDFTYNILI 567
>sp|Q0WKV3|PPR36_ARATH Pentatricopeptide repeat-containing protein At1g12300,
mitochondrial OS=Arabidopsis thaliana GN=At1g12300 PE=2
SV=1
Length = 637
Score = 360 bits (925), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 201/570 (35%), Positives = 310/570 (54%), Gaps = 61/570 (10%)
Query: 46 HENCKSGIINL--NEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVS 103
E +SG++++ ++A F M H +P P + F+ LF A+AK + YD V++ +++
Sbjct: 57 RERLRSGLVDIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMEL 116
Query: 104 IGLLPDFLTLNILINCFGNKER----------------------------GLCVENRIKE 135
G+ + TL+I+INCF + GLC+E R+ E
Sbjct: 117 KGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSE 176
Query: 136 ATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLIS------ 189
A L M+ G +PD+IT TL+NG C +G + A+ L KMV + ++
Sbjct: 177 ALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLN 236
Query: 190 -----------------------KTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINP 226
K + YSIIID LCK G +D A LF EM+ +GI
Sbjct: 237 VMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITT 296
Query: 227 AVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLL 286
++ LI GFC AG W++ L +M+ PN++TF+V+ID K GK+ EA L
Sbjct: 297 NIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELH 356
Query: 287 ELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKI 346
+ MI RG+ PD TY SL+DG+C +D A ++ M SKGC + ++NILINGYCK
Sbjct: 357 KEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKA 416
Query: 347 LNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTY 406
+++ + L+R++ GV +TYNTL+ G + G+ A++LF EM V P++ TY
Sbjct: 417 NRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTY 476
Query: 407 NILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQ 466
IL+DGLC N ++A+++F +E +K E I I+N +I G+C A ++D+AW+LF LP
Sbjct: 477 KILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPL 536
Query: 467 KGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSK 526
KG+ P V TY+IMI GLC+KG L +A ME++G AP+ T+N L+ L + +K
Sbjct: 537 KGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATK 596
Query: 527 VVELLHKMAEPERNLVPDDTTFSIVVDLLA 556
V+L+ ++ D +T +V+D+L+
Sbjct: 597 SVKLIEELKRC--GFSVDASTIKMVIDMLS 624
Score = 74.7 bits (182), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 106/251 (42%), Gaps = 36/251 (14%)
Query: 55 NLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLN 114
+L++A M P I +FN+L K D + +RK+ G++ D +T N
Sbjct: 383 HLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYN 442
Query: 115 ILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRL 174
LI +G C ++ A LF+ M++ V P+++TY L++G C G AL +
Sbjct: 443 TLI-------QGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEI 495
Query: 175 HKKMVSGDYE----------NGLIS-------------------KTNIFSYSIIIDSLCK 205
+K+ E +G+ + K + +Y+I+I LCK
Sbjct: 496 FEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCK 555
Query: 206 EGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLT 265
+G + +A+ LF +M+ G P LI G+ + L E+ G + T
Sbjct: 556 KGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDAST 615
Query: 266 FNVMIDCLCKG 276
++ID L G
Sbjct: 616 IKMVIDMLSDG 626
>sp|Q9LPX2|PPR39_ARATH Pentatricopeptide repeat-containing protein At1g12775,
mitochondrial OS=Arabidopsis thaliana GN=At1g12775 PE=2
SV=1
Length = 644
Score = 356 bits (913), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 197/573 (34%), Positives = 310/573 (54%), Gaps = 61/573 (10%)
Query: 46 HENCKSGIINL--NEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVS 103
+ SG++ + ++A F M +P P + FN LF A+AK + Y+ V++ +++ S
Sbjct: 57 RDKLSSGLVGIKADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMES 116
Query: 104 IGLLPDFLTLNILINCFGNKER----------------------------GLCVENRIKE 135
G+ TL+I+INCF + GLC+E R+ E
Sbjct: 117 KGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSE 176
Query: 136 ATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLIS------ 189
A L M+ G +P +IT TL+NG C G +S A+ L +MV ++ ++
Sbjct: 177 ALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLN 236
Query: 190 -----------------------KTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINP 226
K + YSIIID LCK+G +D A LF EM+ +G
Sbjct: 237 VMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKA 296
Query: 227 AVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLL 286
++ TLI GFC AG W++ L +M+ PN++TF+V+ID K GK+ EA+ LL
Sbjct: 297 DIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLL 356
Query: 287 ELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKI 346
+ M+QRG+ P+ TYNSL+DG+C R++ A ++ M SKGC ++++NILINGYCK
Sbjct: 357 KEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKA 416
Query: 347 LNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTY 406
+++ + L+R++ GV +TYNTL+ G Q+G+ A+KLF EM V PD+ +Y
Sbjct: 417 NRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSY 476
Query: 407 NILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQ 466
IL+DGLC N +++A+++F +E +K E I I+ +I G+C A ++D+AW+LF LP
Sbjct: 477 KILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPL 536
Query: 467 KGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSK 526
KG+ Y+IMI LCRK L KA+ M + G AP+ +T+N L+ L ++ +
Sbjct: 537 KGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATT 596
Query: 527 VVELLHKMAEPERNLVPDDTTFSIVVDLLAKDE 559
EL+ +M D +T +V+++L+ E
Sbjct: 597 AAELIEEMKSS--GFPADVSTVKMVINMLSSGE 627
Score = 136 bits (342), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 87/294 (29%), Positives = 144/294 (48%), Gaps = 2/294 (0%)
Query: 276 GGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVS 335
G K ++A L MIQ P +N L + + + M SKG H++ +
Sbjct: 66 GIKADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYT 125
Query: 336 YNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMK 395
+I+IN +C+ + A S +I+ G + +NTLL+GL + A +L D M
Sbjct: 126 LSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMV 185
Query: 396 LYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLD 455
+P L T N L++GLC N V +AV L + F+ + +++ +CK+G+
Sbjct: 186 EMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTA 245
Query: 456 NAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLM 515
A EL K+ ++ + V YSI+I GLC+ G L+ A + ME G +++T+NTL+
Sbjct: 246 LAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLI 305
Query: 516 HGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSK 569
GF + +LL M +R + P+ TFS+++D K+ K E + K
Sbjct: 306 GGFCNAGRWDDGAKLLRDMI--KRKISPNVVTFSVLIDSFVKEGKLREADQLLK 357
Score = 69.3 bits (168), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 89/189 (47%), Gaps = 2/189 (1%)
Query: 369 ITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHM 428
++Y LS +A A LF +M P + +N L + K + + L
Sbjct: 54 LSYRDKLSSGLVGIKADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQ 113
Query: 429 LEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGK 488
+E I + +I+ C+ +L A+ K+ + G P V ++ +++GLC + +
Sbjct: 114 MESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECR 173
Query: 489 LEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTF 548
+ +A + + M + G P ++T NTL++G N K S V L+ +M E P++ T+
Sbjct: 174 VSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVET--GFQPNEVTY 231
Query: 549 SIVVDLLAK 557
V++++ K
Sbjct: 232 GPVLNVMCK 240
>sp|Q9LQ16|PPR94_ARATH Pentatricopeptide repeat-containing protein At1g62910
OS=Arabidopsis thaliana GN=At1g62910 PE=2 SV=1
Length = 632
Score = 353 bits (906), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 198/568 (34%), Positives = 298/568 (52%), Gaps = 71/568 (12%)
Query: 51 SGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDF 110
S II +++A FG M +P P I FN L AVAK ++ VIS ++ ++G+ D
Sbjct: 59 SDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDL 118
Query: 111 LTLNILINCFGNKER----------------------------GLCVENRIKEATWLFKN 142
T +I INCF + + G C RI +A L
Sbjct: 119 YTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQ 178
Query: 143 MIAFGVR-----------------------------------PDVITYGTLINGFCRTGN 167
M+ G + PD++TYGT++NG C+ G+
Sbjct: 179 MVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGD 238
Query: 168 LSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPA 227
+ +AL L KKM G E ++ Y+ IID LCK +D A LF EM +GI P
Sbjct: 239 IDLALSLLKKMEKGKIE------ADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPD 292
Query: 228 VVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLE 287
V ++LI C G W + + L +M++ PN++TF+ +ID K GK+ EA L +
Sbjct: 293 VFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYD 352
Query: 288 LMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKIL 347
MI+R ++PD FTY+SL++G+C+ R+D A+ +F M SK C VV+Y+ LI G+CK
Sbjct: 353 EMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAK 412
Query: 348 NVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYN 407
VEE M L+R++ G+ +TY TL+ G FQA AQ +F +M V P++ TYN
Sbjct: 413 RVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYN 472
Query: 408 ILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQK 467
IL+DGLCKN + +A+ +F L+ + E I +N +I+G+CKAG++++ WELF L K
Sbjct: 473 ILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLK 532
Query: 468 GLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKV 527
G+ P V+ Y+ MI G CRKG E+A+ L M+++G PN T+NTL+ L++
Sbjct: 533 GVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREAS 592
Query: 528 VELLHKMAEPERNLVPDDTTFSIVVDLL 555
EL+ +M D +T +V ++L
Sbjct: 593 AELIKEMRSC--GFAGDASTIGLVTNML 618
Score = 217 bits (552), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 139/529 (26%), Positives = 256/529 (48%), Gaps = 30/529 (5%)
Query: 54 INLNEARYFFGYMTHMQPSPP-ISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLT 112
I+L R F + +PP + SF L G+ R + + YR+++ L D +
Sbjct: 5 ISLTAKRLFVHWNLQGIGNPPTVPSFFNLCGSGCWERSFASASGDYREILR-NRLSDII- 62
Query: 113 LNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVAL 172
++ +A LF +M+ P ++ + L++ + + +
Sbjct: 63 -------------------KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVI 103
Query: 173 RLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCT 232
L ++M + L ++++YSI I+ C+ + A + +M G P +V +
Sbjct: 104 SLGEQMQT------LGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLS 157
Query: 233 TLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQR 292
+L++G+C + + L +M+++G +P+ TF +I L K +EA L++ M+QR
Sbjct: 158 SLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQR 217
Query: 293 GLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEA 352
G PD TY ++++G C G ID A + M + VV YN +I+G CK ++++A
Sbjct: 218 GCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDA 277
Query: 353 MSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDG 412
++L+ ++ + G+R V TY++L+S L G+ A +L +M + P++ T++ LID
Sbjct: 278 LNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDA 337
Query: 413 LCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPT 472
K + EA KL+ + + I ++ LI+G C RLD A +F + K P
Sbjct: 338 FVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPN 397
Query: 473 VVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLH 532
VVTYS +I G C+ ++E+ + M + G N VT+ TL+HGF Q +
Sbjct: 398 VVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFK 457
Query: 533 KMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKSSYRACLYVTIF 581
+M + P+ T++I++D L K+ K + V + R+ + I+
Sbjct: 458 QMVSV--GVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIY 504
Score = 126 bits (316), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 97/380 (25%), Positives = 172/380 (45%), Gaps = 24/380 (6%)
Query: 212 AKELFLEMKGRGI-NPAVVVCTTLIHGFCCAGNWEE----VNGLFIEMLDLGPRPNLLTF 266
AK LF+ +GI NP V C +G WE +G + E+L
Sbjct: 9 AKRLFVHWNLQGIGNPPTVPS---FFNLCGSGCWERSFASASGDYREILR---------- 55
Query: 267 NVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHS 326
N + D + K+++A L M++ P +N L+ + + + + M +
Sbjct: 56 NRLSDII----KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQT 111
Query: 327 KGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGY 386
G H + +Y+I IN +C+ + A+++ +++ G ++T ++LL+G + +
Sbjct: 112 LGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISD 171
Query: 387 AQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLID 446
A L D+M +PD T+ LI GL +N EAV L + + + + +++
Sbjct: 172 AVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVN 231
Query: 447 GLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAP 506
GLCK G +D A L K+ + + VV Y+ +I GLC+ ++ A + M+ G P
Sbjct: 232 GLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRP 291
Query: 507 NVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSA 566
+V T+++L+ + S LL M E R + P+ TFS ++D K+ K E
Sbjct: 292 DVFTYSSLISCLCNYGRWSDASRLLSDMIE--RKINPNVVTFSALIDAFVKEGKLVEAEK 349
Query: 567 VSKSSYRACLYVTIFQPSSL 586
+ + + IF SSL
Sbjct: 350 LYDEMIKRSIDPDIFTYSSL 369
Score = 68.9 bits (167), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 103/250 (41%), Gaps = 36/250 (14%)
Query: 56 LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNI 115
L+EA++ F M P + +++ L K + + + +R++ GL+ + +T
Sbjct: 379 LDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTT 438
Query: 116 LINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRL- 174
LI+ G A +FK M++ GV P+++TY L++G C+ G L+ A+ +
Sbjct: 439 LIH-------GFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVF 491
Query: 175 --------------HKKMVSGDYENGLIS--------------KTNIFSYSIIIDSLCKE 206
+ M+ G + G + N+ +Y+ +I C++
Sbjct: 492 EYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRK 551
Query: 207 GLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTF 266
G ++A L +MK G P TLI G+ E L EM G + T
Sbjct: 552 GSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTI 611
Query: 267 NVMIDCLCKG 276
++ + L G
Sbjct: 612 GLVTNMLHDG 621
>sp|Q9CAN5|PPR98_ARATH Pentatricopeptide repeat-containing protein At1g63080,
mitochondrial OS=Arabidopsis thaliana GN=At1g63080 PE=2
SV=1
Length = 614
Score = 353 bits (905), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 199/565 (35%), Positives = 295/565 (52%), Gaps = 71/565 (12%)
Query: 54 INLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTL 113
+ L+EA FG M +P P I F+ L A+AK + +D VISF K+ +G+ + T
Sbjct: 44 LKLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTY 103
Query: 114 NILINCFGNKER----------------------------GLCVENRIKEATWLFKNMIA 145
NI+INC + + G C NRI EA L M+
Sbjct: 104 NIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVE 163
Query: 146 FGV-----------------------------------RPDVITYGTLINGFCRTGNLSV 170
G +PD++TYG +ING C+ G +
Sbjct: 164 MGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDL 223
Query: 171 ALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVV 230
AL L KM G E ++ YS +IDSLCK VD A LF EM +GI P V
Sbjct: 224 ALNLLNKMEKGKIE------ADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFT 277
Query: 231 CTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMI 290
++LI C G W + + L +ML+ PN++TFN +ID K GK+ EA L + MI
Sbjct: 278 YSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMI 337
Query: 291 QRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVE 350
QR ++P+ TYNSL++G+C+ R+D A++IF M SK C VV+YN LING+CK V
Sbjct: 338 QRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVV 397
Query: 351 EAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILI 410
+ M L+R + G+ +TY TL+ G FQA AQ +F +M V P++ TYN L+
Sbjct: 398 DGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLL 457
Query: 411 DGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLV 470
DGLCKN +++A+ +F L+ +K E I +N + +G+CKAG++++ W+LF L KG+
Sbjct: 458 DGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVK 517
Query: 471 PTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVEL 530
P V+ Y+ MI G C+KG E+A + M+++G P+ T+NTL+ L++ + EL
Sbjct: 518 PDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAEL 577
Query: 531 LHKMAEPERNLVPDDTTFSIVVDLL 555
+ +M D +T+ +V D+L
Sbjct: 578 IKEMRSCR--FAGDASTYGLVTDML 600
Score = 212 bits (540), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 123/436 (28%), Positives = 222/436 (50%), Gaps = 8/436 (1%)
Query: 132 RIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKT 191
++ EA LF M+ P ++ + L++ + + + +KM L
Sbjct: 45 KLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKM------EILGVSH 98
Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
N+++Y+I+I+ LC+ + A + +M G P++V +L++GFC E L
Sbjct: 99 NLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALV 158
Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
+M+++G +P+ +TF ++ L + K +EA L+E M+ +G PD TY ++++G C
Sbjct: 159 DQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKR 218
Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
G D A + M + VV Y+ +I+ CK +V++A++L+ ++ + G+R V TY
Sbjct: 219 GEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTY 278
Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
++L+S L G+ A +L +M + P++ T+N LID K + EA KLF +
Sbjct: 279 SSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQ 338
Query: 432 NKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEK 491
+ I +N LI+G C RLD A ++F + K +P VVTY+ +I+G C+ K+
Sbjct: 339 RSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVD 398
Query: 492 ANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIV 551
+ M + G N VT+ TL+HGF Q + + +M + P+ T++ +
Sbjct: 399 GMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSD--GVHPNIMTYNTL 456
Query: 552 VDLLAKDEKYHECSAV 567
+D L K+ K + V
Sbjct: 457 LDGLCKNGKLEKAMVV 472
Score = 73.9 bits (180), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 77/307 (25%), Positives = 121/307 (39%), Gaps = 64/307 (20%)
Query: 41 LNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRK 100
N + K G L EA F M P I ++N L + D +
Sbjct: 313 FNSLIDAFAKEG--KLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTL 370
Query: 101 LVSIGLLPDFLTLNILINCFGNKE--------------RGLCVENRI------------- 133
+VS LPD +T N LIN F + RGL V N +
Sbjct: 371 MVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGL-VGNTVTYTTLIHGFFQAS 429
Query: 134 --KEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHK-----KMVSGDYENG 186
A +FK M++ GV P+++TY TL++G C+ G L A+ + + KM Y
Sbjct: 430 DCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYN 489
Query: 187 LIS------------------------KTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGR 222
++S K ++ +Y+ +I CK+GL ++A LF++MK
Sbjct: 490 IMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKED 549
Query: 223 GINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEA 282
G P TLI G+ L EM + T+ ++ D L G++++
Sbjct: 550 GPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDML-HDGRLDK- 607
Query: 283 NGLLELM 289
G LE++
Sbjct: 608 -GFLEVL 613
>sp|Q3ECK2|PPR92_ARATH Pentatricopeptide repeat-containing protein At1g62680,
mitochondrial OS=Arabidopsis thaliana GN=At1g62680 PE=2
SV=2
Length = 548
Score = 350 bits (897), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 185/481 (38%), Positives = 271/481 (56%), Gaps = 21/481 (4%)
Query: 54 INLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTL 113
I LN+A F M +P P I FN L A+ K + YD VIS +K+ +G+ D T
Sbjct: 64 IKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTF 123
Query: 114 NILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALR 173
NI+INCF C ++ A + M+ G PD +T G+L+NGFCR +S A+
Sbjct: 124 NIVINCF-------CCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVS 176
Query: 174 LHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTT 233
L KMV Y K +I +Y+ IIDSLCK V+ A + F E++ +GI P VV T
Sbjct: 177 LVDKMVEIGY------KPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTA 230
Query: 234 LIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRG 293
L++G C + W + L +M+ PN++T++ ++D K GK+ EA L E M++
Sbjct: 231 LVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMS 290
Query: 294 LNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAM 353
++PD TY+SL++G CL RID A ++F M SKGC VVSYN LING+CK VE+ M
Sbjct: 291 IDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGM 350
Query: 354 SLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGL 413
L+R++ G+ +TYNTL+ G FQAG AQ+ F +M + + PD+ TYNIL+ GL
Sbjct: 351 KLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGL 410
Query: 414 CKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTV 473
C N +++A+ +F ++ + + I + +I G+CK G+++ AW LF L KGL P +
Sbjct: 411 CDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDI 470
Query: 474 VTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHK 533
VTY+ M+ GLC KG L + M++ G N T L + + EL+ K
Sbjct: 471 VTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCT--------LSDGDITLSAELIKK 522
Query: 534 M 534
M
Sbjct: 523 M 523
Score = 199 bits (506), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 128/441 (29%), Positives = 218/441 (49%), Gaps = 25/441 (5%)
Query: 48 NCKSGIINLNEARYFFGYMTHMQPSPP-ISSFNLLFGAVAKNRHYDAVISFYRKLVSIGL 106
NC ++ A G M + P ++ +L+ G +NR DAV S K+V IG
Sbjct: 128 NCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAV-SLVDKMVEIGY 186
Query: 107 LPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTG 166
PD + N +I+ LC R+ +A FK + G+RP+V+TY L+NG C +
Sbjct: 187 KPDIVAYNAIID-------SLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSS 239
Query: 167 NLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINP 226
S A RL M+ N+ +YS ++D+ K G V +AKELF EM I+P
Sbjct: 240 RWSDAARLLSDMIKKKIT------PNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDP 293
Query: 227 AVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLL 286
+V ++LI+G C +E N +F M+ G +++++N +I+ CK ++ + L
Sbjct: 294 DIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLF 353
Query: 287 ELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKI 346
M QRGL + TYN+L+ G+ G +D A+E F M G + +YNIL+ G C
Sbjct: 354 REMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDN 413
Query: 347 LNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTY 406
+E+A+ ++ + + ++TY T++ G+ + G+ A LF + L ++PD+ TY
Sbjct: 414 GELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTY 473
Query: 407 NILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQ 466
++ GLC + E L+ ++ G+ +C + G + + EL K+
Sbjct: 474 TTMMSGLCTKGLLHEVEALYTKMKQE----GLMKNDCTLSD----GDITLSAELIKKMLS 525
Query: 467 KGLVPTVVTYSIMIHGLCRKG 487
G P+++ + G+C+K
Sbjct: 526 CGYAPSLL--KDIKSGVCKKA 544
Score = 197 bits (502), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 108/372 (29%), Positives = 199/372 (53%), Gaps = 2/372 (0%)
Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
+I ++ ++ ++ K D L +M+ GI + +I+ FCC +
Sbjct: 84 SIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSIL 143
Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
+ML LG P+ +T +++ C+ ++++A L++ M++ G PD YN+++D C
Sbjct: 144 GKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKT 203
Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
R++ A + F + KG + VV+Y L+NG C +A L +I + VITY
Sbjct: 204 KRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITY 263
Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
+ LL + G+ A++LF+EM +++PD+ TY+ LI+GLC ++ + EA ++F ++
Sbjct: 264 SALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVS 323
Query: 432 NKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEK 491
+ +N LI+G CKA R+++ +LF ++ Q+GLV VTY+ +I G + G ++K
Sbjct: 324 KGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDK 383
Query: 492 ANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIV 551
A +F M+ G +P++ T+N L+ G N + K + + M + E +L D T++ V
Sbjct: 384 AQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDL--DIVTYTTV 441
Query: 552 VDLLAKDEKYHE 563
+ + K K E
Sbjct: 442 IRGMCKTGKVEE 453
Score = 192 bits (489), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 116/436 (26%), Positives = 220/436 (50%), Gaps = 8/436 (1%)
Query: 132 RIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKT 191
++ +A LF +M+ P ++ + L++ + V + L KKM L +
Sbjct: 65 KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKM------EVLGIRN 118
Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
++++++I+I+ C V A + +M G P V +L++GFC + L
Sbjct: 119 DLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLV 178
Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
+M+++G +P+++ +N +ID LCK ++N+A + + ++G+ P+ TY +L++G C
Sbjct: 179 DKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNS 238
Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
R A + M K V++Y+ L++ + K V EA L+ +++ + ++TY
Sbjct: 239 SRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTY 298
Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
++L++GL + A ++FD M D+ +YN LI+G CK V++ +KLF +
Sbjct: 299 SSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQ 358
Query: 432 NKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEK 491
+N LI G +AG +D A E F ++ G+ P + TY+I++ GLC G+LEK
Sbjct: 359 RGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEK 418
Query: 492 ANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIV 551
A M+K ++VT+ T++ G + K + L ++ + L PD T++ +
Sbjct: 419 ALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLS--LKGLKPDIVTYTTM 476
Query: 552 VDLLAKDEKYHECSAV 567
+ L HE A+
Sbjct: 477 MSGLCTKGLLHEVEAL 492
Score = 99.4 bits (246), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 122/242 (50%), Gaps = 6/242 (2%)
Query: 347 LNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTY 406
+ + +A+ L+ ++ + +++ +N LLS + + + L +M++ + DL T+
Sbjct: 64 IKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTF 123
Query: 407 NILIDGLCKNNCVQEAVKLFHMLEMNK--FEFGIEIFNCLIDGLCKAGRLDNAWELFHKL 464
NI+I+ C C Q ++ L + +M K +E L++G C+ R+ +A L K+
Sbjct: 124 NIVINCFC--CCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 181
Query: 465 PQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKT 524
+ G P +V Y+ +I LC+ ++ A DF +E+ G PNVVT+ L++G +++
Sbjct: 182 VEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRW 241
Query: 525 SKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKSSYRACLYVTIFQPS 584
S LL M + + + P+ T+S ++D K+ K E + + R + I S
Sbjct: 242 SDAARLLSDMIK--KKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYS 299
Query: 585 SL 586
SL
Sbjct: 300 SL 301
>sp|Q9CAN0|PPR99_ARATH Pentatricopeptide repeat-containing protein At1g63130,
mitochondrial OS=Arabidopsis thaliana GN=At1g63130 PE=2
SV=1
Length = 630
Score = 349 bits (896), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 202/565 (35%), Positives = 302/565 (53%), Gaps = 71/565 (12%)
Query: 54 INLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVIS----------------- 96
+ L++A FG M +P P I F+ L A+AK +D VIS
Sbjct: 60 LKLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTY 119
Query: 97 ------FYR------------KLVSIGLLPDFLTLNILIN--CFGNKE------------ 124
F R K++ +G PD +TLN L+N C GN+
Sbjct: 120 SILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVE 179
Query: 125 --------------RGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSV 170
GL NR EA L M+ G +PD++TYG ++NG C+ G++ +
Sbjct: 180 MGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDL 239
Query: 171 ALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVV 230
AL L KKM G E G++ Y+ IID+LC V+ A LF EM +GI P VV
Sbjct: 240 ALSLLKKMEQGKIEPGVVI------YNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVT 293
Query: 231 CTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMI 290
+LI C G W + + L +M++ PN++TF+ +ID K GK+ EA L + MI
Sbjct: 294 YNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMI 353
Query: 291 QRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVE 350
+R ++PD FTY+SL++G+C+ R+D A+ +F M SK C VV+YN LI G+CK V+
Sbjct: 354 KRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVD 413
Query: 351 EAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILI 410
E M L+R++ G+ +TY TL+ G FQA + AQ +F +M V PD+ TY+IL+
Sbjct: 414 EGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILL 473
Query: 411 DGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLV 470
DGLC N V+ A+ +F L+ +K E I +N +I+G+CKAG++++ W+LF L KG+
Sbjct: 474 DGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVK 533
Query: 471 PTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVEL 530
P VVTY+ M+ G CRKG E+A+ M++ G P+ T+NTL+ L++ + EL
Sbjct: 534 PNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAEL 593
Query: 531 LHKMAEPERNLVPDDTTFSIVVDLL 555
+ +M V D +T +V ++L
Sbjct: 594 IREMRSCR--FVGDASTIGLVTNML 616
Score = 214 bits (544), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 122/429 (28%), Positives = 221/429 (51%), Gaps = 8/429 (1%)
Query: 132 RIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKT 191
++ +A LF +M+ P ++ + L++ + + + L ++M +N IS
Sbjct: 61 KLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQM-----QNLGISH- 114
Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
N+++YSI+I+ C+ + A + +M G P +V +L++GFC + L
Sbjct: 115 NLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLV 174
Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
+M+++G +P+ TFN +I L + + +EA L++ M+ +G PD TY +++G C
Sbjct: 175 GQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKR 234
Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
G ID A + M + VV YN +I+ C NV +A++L+ ++ + G+R V+TY
Sbjct: 235 GDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTY 294
Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
N+L+ L G+ A +L +M + P++ T++ LID K + EA KL+ +
Sbjct: 295 NSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIK 354
Query: 432 NKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEK 491
+ I ++ LI+G C RLD A +F + K P VVTY+ +I G C+ ++++
Sbjct: 355 RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDE 414
Query: 492 ANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIV 551
+ M + G N VT+ TL+HGF Q + + +M ++PD T+SI+
Sbjct: 415 GMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSD--GVLPDIMTYSIL 472
Query: 552 VDLLAKDEK 560
+D L + K
Sbjct: 473 LDGLCNNGK 481
Score = 132 bits (331), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 85/309 (27%), Positives = 147/309 (47%), Gaps = 2/309 (0%)
Query: 278 KINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYN 337
K+++A L M++ P ++ L+ + + D + M + G H + +Y+
Sbjct: 61 KLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 120
Query: 338 ILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLY 397
ILIN +C+ + A+++ +++ G ++T N+LL+G + A L +M
Sbjct: 121 ILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEM 180
Query: 398 NVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNA 457
+PD T+N LI GL ++N EAV L + + + + + +++GLCK G +D A
Sbjct: 181 GYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLA 240
Query: 458 WELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHG 517
L K+ Q + P VV Y+ +I LC + A + M+ G PNVVT+N+L+
Sbjct: 241 LSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 300
Query: 518 FLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKSSYRACLY 577
+ S LL M E R + P+ TFS ++D K+ K E + + +
Sbjct: 301 LCNYGRWSDASRLLSDMIE--RKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID 358
Query: 578 VTIFQPSSL 586
IF SSL
Sbjct: 359 PDIFTYSSL 367
>sp|Q9SXD8|PPR90_ARATH Pentatricopeptide repeat-containing protein At1g62590
OS=Arabidopsis thaliana GN=At1g62590 PE=2 SV=1
Length = 634
Score = 347 bits (891), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 186/507 (36%), Positives = 290/507 (57%), Gaps = 17/507 (3%)
Query: 49 CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
C+ I+L A G M + P I + + L + ++ ++V +G P
Sbjct: 131 CRRSQISL--ALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRP 188
Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
D +T LI+ GL + N+ EA L M+ G +P+++TYG ++NG C+ G+
Sbjct: 189 DTITFTTLIH-------GLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDT 241
Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
+AL L KM + E ++ ++ IIDSLCK VD A LF EM+ +GI P V
Sbjct: 242 DLALNLLNKMEAAKIE------ADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNV 295
Query: 229 VVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLEL 288
V ++LI C G W + + L +M++ PNL+TFN +ID K GK EA L +
Sbjct: 296 VTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDD 355
Query: 289 MIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILN 348
MI+R ++PD FTYNSL++G+C+ R+D A+++F M SK C VV+YN LI G+CK
Sbjct: 356 MIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKR 415
Query: 349 VEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNI 408
VE+ L+R++ G+ +TY TL+ GLF G AQK+F +M V PD+ TY+I
Sbjct: 416 VEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSI 475
Query: 409 LIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKG 468
L+DGLC N +++A+++F ++ ++ + I I+ +I+G+CKAG++D+ W+LF L KG
Sbjct: 476 LLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKG 535
Query: 469 LVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVV 528
+ P VVTY+ MI GLC K L++A L M+++G PN T+NTL+ L++ +
Sbjct: 536 VKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASA 595
Query: 529 ELLHKMAEPERNLVPDDTTFSIVVDLL 555
EL+ +M V D +T +V ++L
Sbjct: 596 ELIREMRSCR--FVGDASTIGLVANML 620
Score = 214 bits (545), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 124/451 (27%), Positives = 227/451 (50%), Gaps = 12/451 (2%)
Query: 132 RIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKT 191
++ +A LF M+ P ++ + L++ + V + L +KM + +GL
Sbjct: 65 KLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGL---- 120
Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
++Y+I+I+ C+ + A L +M G P++V ++L++G+C + L
Sbjct: 121 --YTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALV 178
Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
+M+++G RP+ +TF +I L K +EA L++ M+QRG P+ TY +++G C
Sbjct: 179 DQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKR 238
Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
G D A + M + + VV +N +I+ CK +V++A++L++++ + G+R V+TY
Sbjct: 239 GDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTY 298
Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
++L+S L G+ A +L +M + P+L T+N LID K EA KL+ +
Sbjct: 299 SSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIK 358
Query: 432 NKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEK 491
+ I +N L++G C RLD A ++F + K P VVTY+ +I G C+ ++E
Sbjct: 359 RSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVED 418
Query: 492 ANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIV 551
+ M G + VT+ TL+ G + ++ +M + PD T+SI+
Sbjct: 419 GTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSD--GVPPDIMTYSIL 476
Query: 552 VDLLAKDEKYHECSAV----SKSSYRACLYV 578
+D L + K + V KS + +Y+
Sbjct: 477 LDGLCNNGKLEKALEVFDYMQKSEIKLDIYI 507
Score = 91.3 bits (225), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 112/220 (50%), Gaps = 3/220 (1%)
Query: 338 ILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLY 397
IL NG + +++A+ L+ ++ + +++ +N LLS + + + L ++M+
Sbjct: 56 ILRNGLHD-MKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRL 114
Query: 398 NVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNA 457
+ L TYNILI+ C+ + + A+ L + +E I + L++G C R+ +A
Sbjct: 115 EIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDA 174
Query: 458 WELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHG 517
L ++ + G P +T++ +IHGL K +A + M + GC PN+VT+ +++G
Sbjct: 175 VALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNG 234
Query: 518 FLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAK 557
+ T + LL+KM + + D F+ ++D L K
Sbjct: 235 LCKRGDTDLALNLLNKMEAAK--IEADVVIFNTIIDSLCK 272
>sp|Q9SXD1|PPR91_ARATH Pentatricopeptide repeat-containing protein At1g62670,
mitochondrial OS=Arabidopsis thaliana GN=At1g62670 PE=2
SV=2
Length = 630
Score = 344 bits (883), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 193/565 (34%), Positives = 296/565 (52%), Gaps = 71/565 (12%)
Query: 54 INLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTL 113
+ L++A FG M +P P I F+ L A+AK +D VIS ++ ++G+ + T
Sbjct: 60 LKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTY 119
Query: 114 NILINCFGNKER----------------------------GLCVENRIKEAT-------- 137
+ILINCF + + G C RI EA
Sbjct: 120 SILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFV 179
Query: 138 ---------------------------WLFKNMIAFGVRPDVITYGTLINGFCRTGNLSV 170
L M+A G +PD++TYG ++NG C+ G+ +
Sbjct: 180 TGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDL 239
Query: 171 ALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVV 230
A L KM G E G + Y+ IID LCK +D A LF EM+ +GI P VV
Sbjct: 240 AFNLLNKMEQGKLEPG------VLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVT 293
Query: 231 CTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMI 290
++LI C G W + + L +M++ P++ TF+ +ID K GK+ EA L + M+
Sbjct: 294 YSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMV 353
Query: 291 QRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVE 350
+R ++P TY+SL++G+C+ R+D A+++F M SK C VV+YN LI G+CK VE
Sbjct: 354 KRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVE 413
Query: 351 EAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILI 410
E M ++R++ G+ +TYN L+ GLFQAG AQ++F EM V P++ TYN L+
Sbjct: 414 EGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLL 473
Query: 411 DGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLV 470
DGLCKN +++A+ +F L+ +K E I +N +I+G+CKAG++++ W+LF L KG+
Sbjct: 474 DGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVK 533
Query: 471 PTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVEL 530
P VV Y+ MI G CRKG E+A+ M+++G PN +NTL+ L++ EL
Sbjct: 534 PDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAEL 593
Query: 531 LHKMAEPERNLVPDDTTFSIVVDLL 555
+ +M D +T +V ++L
Sbjct: 594 IKEMRSC--GFAGDASTIGLVTNML 616
Score = 211 bits (536), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 126/452 (27%), Positives = 227/452 (50%), Gaps = 8/452 (1%)
Query: 130 ENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLIS 189
E ++ +A LF M+ P +I + L++ + V + L ++M L
Sbjct: 59 ELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQM------QNLGI 112
Query: 190 KTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNG 249
N ++YSI+I+ C+ + A + +M G P +V ++L++G+C + E
Sbjct: 113 PHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVA 172
Query: 250 LFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYC 309
L +M G +PN +TFN +I L K +EA L++ M+ +G PD TY +++G C
Sbjct: 173 LVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLC 232
Query: 310 LVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVI 369
G D A + M + V+ YN +I+G CK ++++A++L++++ + G+R V+
Sbjct: 233 KRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVV 292
Query: 370 TYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHML 429
TY++L+S L G+ A +L +M + PD+ T++ LID K + EA KL+ +
Sbjct: 293 TYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEM 352
Query: 430 EMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKL 489
+ I ++ LI+G C RLD A ++F + K P VVTY+ +I G C+ ++
Sbjct: 353 VKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRV 412
Query: 490 EKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFS 549
E+ + M + G N VT+N L+ G Q E+ +M + P+ T++
Sbjct: 413 EEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSD--GVPPNIMTYN 470
Query: 550 IVVDLLAKDEKYHECSAVSKSSYRACLYVTIF 581
++D L K+ K + V + R+ + TI+
Sbjct: 471 TLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIY 502
Score = 142 bits (357), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 95/342 (27%), Positives = 158/342 (46%), Gaps = 37/342 (10%)
Query: 245 EEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSL 304
++ LF EM+ P P+++ F+ ++ + K K + L E M G+ + +TY+ L
Sbjct: 63 DDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSIL 122
Query: 305 MDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGV 364
++ +C ++ A + M G + +V+ + L+NGYC + EA++L Q+ G
Sbjct: 123 INCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGY 182
Query: 365 RQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVK 424
+ +T+NTL+ GLF +A A L D M +PDL TY ++++G
Sbjct: 183 QPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNG------------ 230
Query: 425 LFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLC 484
LCK G D A+ L +K+ Q L P V+ Y+ +I GLC
Sbjct: 231 -----------------------LCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLC 267
Query: 485 RKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPD 544
+ ++ A + ME G PNVVT+++L+ + S LL M E R + PD
Sbjct: 268 KYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIE--RKINPD 325
Query: 545 DTTFSIVVDLLAKDEKYHECSAVSKSSYRACLYVTIFQPSSL 586
TFS ++D K+ K E + + + +I SSL
Sbjct: 326 VFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSL 367
Score = 80.1 bits (196), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 108/250 (43%), Gaps = 36/250 (14%)
Query: 56 LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNI 115
L+EA+ F +M P + ++N L K + + + +R++ GL+ + +T NI
Sbjct: 377 LDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNI 436
Query: 116 LINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRL- 174
LI +GL A +FK M++ GV P+++TY TL++G C+ G L A+ +
Sbjct: 437 LI-------QGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVF 489
Query: 175 --------------HKKMVSGDYENGLIS--------------KTNIFSYSIIIDSLCKE 206
+ M+ G + G + K ++ +Y+ +I C++
Sbjct: 490 EYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRK 549
Query: 207 GLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTF 266
G ++A LF EMK G P TLI G+ E L EM G + T
Sbjct: 550 GSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTI 609
Query: 267 NVMIDCLCKG 276
++ + L G
Sbjct: 610 GLVTNMLHDG 619
>sp|Q9CAM8|PP100_ARATH Pentatricopeptide repeat-containing protein At1g63150
OS=Arabidopsis thaliana GN=At1g63150 PE=2 SV=1
Length = 629
Score = 342 bits (876), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 198/568 (34%), Positives = 298/568 (52%), Gaps = 74/568 (13%)
Query: 51 SGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDF 110
S II +++A FG M +P P I FN L AVAK ++ VIS ++ ++G+ D
Sbjct: 59 SDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDL 118
Query: 111 LTLNILINCFGNKER----------------------------GLCVENRIKEATWLFKN 142
T +I INCF + + G C RI +A L
Sbjct: 119 YTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQ 178
Query: 143 MIAFGVR-----------------------------------PDVITYGTLINGFCRTGN 167
M+ G + PD++TYGT++NG C+ G+
Sbjct: 179 MVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGD 238
Query: 168 LSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPA 227
+ +AL L KM + K N+ ++ IIDSLCK V+ A +LF EM+ +GI P
Sbjct: 239 IDLALNLLNKMEAARI------KANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPN 292
Query: 228 VVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLE 287
VV +LI+ C G W + + L ML+ PN++TFN +ID K GK+ EA L E
Sbjct: 293 VVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHE 352
Query: 288 LMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKIL 347
MIQR ++PD TYN L++G+C+ R+D A+++F M SK C + +YN LING+CK
Sbjct: 353 EMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCK 412
Query: 348 NVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYN 407
VE+ + L+R++ G+ +TY T++ G FQAG AQ +F +M V D+ TY+
Sbjct: 413 RVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYS 472
Query: 408 ILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQK 467
IL+ GLC + A+ +F L+ ++ E I I+N +I+G+CKAG++ AW+LF L K
Sbjct: 473 ILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIK 532
Query: 468 GLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKV 527
P VVTY+ MI GLC K L++A+D M+++G PN T+NTL+ L++ +
Sbjct: 533 ---PDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAAS 589
Query: 528 VELLHKMAEPERNLVPDDTTFSIVVDLL 555
EL+ +M V D +T S+V ++L
Sbjct: 590 AELIKEMRSS--GFVGDASTISLVTNML 615
Score = 206 bits (524), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 138/530 (26%), Positives = 250/530 (47%), Gaps = 32/530 (6%)
Query: 54 INLNEARYFFGYMTHMQPSPP-ISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLT 112
I+L R F + +PP + SF L G+ R + + YR+++ L D +
Sbjct: 5 ISLTAKRLFVHWNLQGIGNPPTVPSFFNLCGSGCWERSFASASGDYREILR-NRLSDII- 62
Query: 113 LNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVAL 172
++ +A LF +M+ P ++ + L++ + + +
Sbjct: 63 -------------------KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVI 103
Query: 173 RLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCT 232
L ++M + L ++++YSI I+ C+ + A + +M G P +V +
Sbjct: 104 SLGEQMQT------LGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLS 157
Query: 233 TLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQR 292
+L++G+C + + L +M+++G +P+ TF +I L K +EA L++ M+QR
Sbjct: 158 SLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQR 217
Query: 293 GLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEA 352
G PD TY ++++G C G ID A + M + K VV +N +I+ CK +VE A
Sbjct: 218 GCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVA 277
Query: 353 MSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDG 412
+ L+ ++ + G+R V+TYN+L++ L G+ A +L M + P++ T+N LID
Sbjct: 278 VDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDA 337
Query: 413 LCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPT 472
K + EA KL + + +N LI+G C RLD A ++F + K +P
Sbjct: 338 FFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPN 397
Query: 473 VVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLH 532
+ TY+ +I+G C+ ++E + M + G N VT+ T++ GF Q +
Sbjct: 398 IQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFK 457
Query: 533 KMAEPERNLVPDDT-TFSIVVDLLAKDEKYHECSAVSKSSYRACLYVTIF 581
+M N VP D T+SI++ L K + K ++ + + IF
Sbjct: 458 QMVS---NRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIF 504
>sp|Q9C8T7|PP101_ARATH Pentatricopeptide repeat-containing protein At1g63330
OS=Arabidopsis thaliana GN=At1g63330 PE=2 SV=2
Length = 559
Score = 342 bits (876), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 182/507 (35%), Positives = 289/507 (57%), Gaps = 17/507 (3%)
Query: 49 CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
C+ I+L A G M + P I + + L + ++ ++V +G P
Sbjct: 56 CRRSQISL--ALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRP 113
Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
D +T LI+ GL + N+ EA L M+ G +P+++TYG ++NG C+ G++
Sbjct: 114 DTITFTTLIH-------GLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDI 166
Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
+A L KM + E ++ ++ IIDSLCK VD A LF EM+ +GI P V
Sbjct: 167 DLAFNLLNKMEAAKIE------ADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNV 220
Query: 229 VVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLEL 288
V ++LI C G W + + L +M++ PNL+TFN +ID K GK EA L +
Sbjct: 221 VTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDD 280
Query: 289 MIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILN 348
MI+R ++PD FTYNSL++G+C+ R+D A+++F M SK C + +YN LI G+CK
Sbjct: 281 MIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKR 340
Query: 349 VEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNI 408
VE+ L+R++ G+ +TY TL+ GLF G AQK+F +M V PD+ TY+I
Sbjct: 341 VEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSI 400
Query: 409 LIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKG 468
L+DGLC N +++A+++F ++ ++ + I I+ +I+G+CKAG++D+ W+LF L KG
Sbjct: 401 LLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKG 460
Query: 469 LVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVV 528
+ P VVTY+ MI GLC K L++A L M+++G P+ T+NTL+ L++ +
Sbjct: 461 VKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASA 520
Query: 529 ELLHKMAEPERNLVPDDTTFSIVVDLL 555
EL+ +M V D +T +V ++L
Sbjct: 521 ELIREMRSCR--FVGDASTIGLVANML 545
Score = 203 bits (516), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 119/433 (27%), Positives = 216/433 (49%), Gaps = 12/433 (2%)
Query: 150 PDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLV 209
P + + L++ + + + L +KM L N+++Y+I+I+ C+ +
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISLGEKM------QRLGISHNLYTYNILINCFCRRSQI 61
Query: 210 DKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVM 269
A L +M G P++V ++L++G+C + L +M+++G RP+ +TF +
Sbjct: 62 SLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTL 121
Query: 270 IDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGC 329
I L K +EA L++ M+QRG P+ TY +++G C G ID A + M +
Sbjct: 122 IHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKI 181
Query: 330 KHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQK 389
+ VV +N +I+ CK +V++A++L++++ + G+R V+TY++L+S L G+ A +
Sbjct: 182 EADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQ 241
Query: 390 LFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLC 449
L +M + P+L T+N LID K EA KL + + I +N LI+G C
Sbjct: 242 LLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFC 301
Query: 450 KAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVV 509
RLD A ++F + K P + TY+ +I G C+ ++E + M G + V
Sbjct: 302 MHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTV 361
Query: 510 TFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAV-- 567
T+ TL+ G + ++ +M + PD T+SI++D L + K + V
Sbjct: 362 TYTTLIQGLFHDGDCDNAQKVFKQMVSD--GVPPDIMTYSILLDGLCNNGKLEKALEVFD 419
Query: 568 --SKSSYRACLYV 578
KS + +Y+
Sbjct: 420 YMQKSEIKLDIYI 432
Score = 170 bits (431), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 98/300 (32%), Positives = 164/300 (54%), Gaps = 2/300 (0%)
Query: 254 MLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGR 313
M+ P P++ FN ++ + K K + L E M + G++ + +TYN L++ +C +
Sbjct: 1 MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60
Query: 314 IDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNT 373
I A + M G + ++V+ + L+NGYC + +A++L Q++ G R IT+ T
Sbjct: 61 ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 120
Query: 374 LLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNK 433
L+ GLF +A A L D M +P+L TY ++++GLCK + A L + +E K
Sbjct: 121 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAK 180
Query: 434 FEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKAN 493
E + IFN +ID LCK +D+A LF ++ KG+ P VVTYS +I LC G+ A+
Sbjct: 181 IEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDAS 240
Query: 494 DFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
L M + PN+VTFN L+ F++ K + +L M +R++ PD T++ +++
Sbjct: 241 QLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMI--KRSIDPDIFTYNSLIN 298
>sp|Q9SH26|PP102_ARATH Pentatricopeptide repeat-containing protein At1g63400
OS=Arabidopsis thaliana GN=At1g63400 PE=2 SV=1
Length = 577
Score = 330 bits (846), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 188/541 (34%), Positives = 279/541 (51%), Gaps = 71/541 (13%)
Query: 33 AVSSPETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYD 92
A SS E L S + L++A FG M +P P I FN L A+AK + +D
Sbjct: 45 AFSSGSGDYREILRNGLHS--MKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFD 102
Query: 93 AVISFYRKLVSIGLLPDFLTLNILINCFGNKER--------------------------- 125
VIS K+ +G+ + T NILINCF + +
Sbjct: 103 LVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLL 162
Query: 126 -GLCVENRIKEATWLFKNMIAFGVRPDVI------------------------------- 153
G C RI +A L M+ G RPD I
Sbjct: 163 NGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQ 222
Query: 154 ----TYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLV 209
TYG ++NG C+ G++ +A L KM + E N+ YS +IDSLCK
Sbjct: 223 PNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIE------ANVVIYSTVIDSLCKYRHE 276
Query: 210 DKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVM 269
D A LF EM+ +G+ P V+ ++LI C W + + L +M++ PN++TFN +
Sbjct: 277 DDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNAL 336
Query: 270 IDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGC 329
ID K GK+ EA L + MI+R ++PD FTY+SL++G+C+ R+D A+ +F M SK C
Sbjct: 337 IDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDC 396
Query: 330 KHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQK 389
VV+YN LING+CK ++E + L+R++ G+ +TY TL+ G FQA AQ
Sbjct: 397 FPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQM 456
Query: 390 LFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLC 449
+F +M V P++ TYN L+DGLCKN +++A+ +F L+ +K E I +N +I+G+C
Sbjct: 457 VFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMC 516
Query: 450 KAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVV 509
KAG++++ W+LF L KG+ P V+ Y+ MI G CRKG E+A+ M ++G P+
Sbjct: 517 KAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDSG 576
Query: 510 T 510
T
Sbjct: 577 T 577
Score = 176 bits (445), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 102/361 (28%), Positives = 191/361 (52%), Gaps = 2/361 (0%)
Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
+IF ++ ++ ++ K D L +M+ GI+ + LI+ FC L
Sbjct: 84 SIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALL 143
Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
+M+ LG P+++T + +++ C G +I++A L++ M++ G PD T+ +L+ G L
Sbjct: 144 GKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLH 203
Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
+ A + M +GC+ +V+Y +++NG CK +++ A +L ++ + + V+ Y
Sbjct: 204 NKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIY 263
Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
+T++ L + A LF EM+ V P++ TY+ LI LC +A +L +
Sbjct: 264 STVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIE 323
Query: 432 NKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEK 491
K + FN LID K G+L A +L+ ++ ++ + P + TYS +I+G C +L++
Sbjct: 324 RKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDE 383
Query: 492 ANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIV 551
A M C PNVVT+NTL++GF + + + VEL +M+ +R LV + T++ +
Sbjct: 384 AKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMS--QRGLVGNTVTYTTL 441
Query: 552 V 552
+
Sbjct: 442 I 442
Score = 169 bits (428), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 100/319 (31%), Positives = 171/319 (53%), Gaps = 2/319 (0%)
Query: 245 EEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSL 304
++ GLF M+ P P++ FN ++ + K K + L E M + G++ + +TYN L
Sbjct: 67 DDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNIL 126
Query: 305 MDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGV 364
++ +C +I A + M G + ++V+ + L+NGYC + +A++L Q++ G
Sbjct: 127 INCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGY 186
Query: 365 RQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVK 424
R IT+ TL+ GLF +A A L D M +P+L TY ++++GLCK + A
Sbjct: 187 RPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFN 246
Query: 425 LFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLC 484
L + +E K E + I++ +ID LCK D+A LF ++ KG+ P V+TYS +I LC
Sbjct: 247 LLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLC 306
Query: 485 RKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPD 544
+ A+ L M + PNVVTFN L+ F++ K + +L +M +R++ PD
Sbjct: 307 NYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMI--KRSIDPD 364
Query: 545 DTTFSIVVDLLAKDEKYHE 563
T+S +++ ++ E
Sbjct: 365 IFTYSSLINGFCMHDRLDE 383
Score = 90.9 bits (224), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 113/222 (50%), Gaps = 7/222 (3%)
Query: 338 ILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLY 397
IL NG + +++A+ L+ ++ + ++ +N LLS + + + L ++M+
Sbjct: 56 ILRNGL-HSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRL 114
Query: 398 NVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNA 457
+ +L TYNILI+ C+ + + A+ L + +E I + L++G C R+ +A
Sbjct: 115 GISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDA 174
Query: 458 WELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHG 517
L ++ + G P +T++ +IHGL K +A + M + GC PN+VT+ +++G
Sbjct: 175 VALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNG 234
Query: 518 FLQNNKTSKVVELLHKM--AEPERNLVPDDTTFSIVVDLLAK 557
+ LL+KM A+ E N+V +S V+D L K
Sbjct: 235 LCKRGDIDLAFNLLNKMEAAKIEANVV----IYSTVIDSLCK 272
>sp|Q9SI78|PPR93_ARATH Pentatricopeptide repeat-containing protein At1g62720
OS=Arabidopsis thaliana GN=At1g62720 PE=2 SV=1
Length = 485
Score = 326 bits (835), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 176/457 (38%), Positives = 265/457 (57%), Gaps = 16/457 (3%)
Query: 50 KSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPD 109
K +NL E F M +P P I F+ + +AK+++YD VIS + + G+ D
Sbjct: 44 KRSSMNLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHD 103
Query: 110 FLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLS 169
+ NI+INC LC +R A + M+ FG PDV+T +LINGFC+ +
Sbjct: 104 LYSYNIVINC-------LCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVF 156
Query: 170 VALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVV 229
A+ L KM E G + ++ Y+ IID CK GLV+ A ELF M+ G+ V
Sbjct: 157 DAIDLVSKM----EEMGF--RPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAV 210
Query: 230 VCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELM 289
+L+ G CC+G W + L +M+ PN++TF +ID K GK +EA L E M
Sbjct: 211 TYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEM 270
Query: 290 IQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNV 349
+R ++PD FTYNSL++G C+ GR+D A+++ M +KGC VV+YN LING+CK V
Sbjct: 271 TRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRV 330
Query: 350 EEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNIL 409
+E L+R++ G+ ITYNT++ G FQAG+ AQ++F M + P++ TY+IL
Sbjct: 331 DEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRM---DSRPNIRTYSIL 387
Query: 410 IDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGL 469
+ GLC N V++A+ LF ++ ++ E I +N +I G+CK G +++AW+LF L KGL
Sbjct: 388 LYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGL 447
Query: 470 VPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAP 506
P VV+Y+ MI G CRK + +K++ M+++G P
Sbjct: 448 KPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484
Score = 192 bits (487), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 128/450 (28%), Positives = 210/450 (46%), Gaps = 44/450 (9%)
Query: 120 FGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRL-HKKM 178
F K + +E I LF MI P ++ + +++ ++ N + + L H
Sbjct: 41 FSTKRSSMNLEEEID----LFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHME 96
Query: 179 VSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGF 238
V G +++SY+I+I+ LC+ A + +M G P VV ++LI+GF
Sbjct: 97 VCG-------IGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGF 149
Query: 239 CCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDR 298
C + L +M ++G RP+++ +N +ID CK G +N+A L + M + G+ D
Sbjct: 150 CQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADA 209
Query: 299 FTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQ 358
TYNSL+ G C GR A + M + V+++ +I+ + K EAM LY +
Sbjct: 210 VTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEE 269
Query: 359 IISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNC 418
+ V V TYN+L++GL G+ A+++ D M PD+ TYN LI+G CK+
Sbjct: 270 MTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKR 329
Query: 419 VQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPT------ 472
V E KLF + +N +I G +AGR D A E+F ++ + + T
Sbjct: 330 VDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRPNIRTYSILLY 389
Query: 473 --------------------------VVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAP 506
+ TY+I+IHG+C+ G +E A D + G P
Sbjct: 390 GLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKP 449
Query: 507 NVVTFNTLMHGFLQNNKTSKVVELLHKMAE 536
+VV++ T++ GF + + K L KM E
Sbjct: 450 DVVSYTTMISGFCRKRQWDKSDLLYRKMQE 479
Score = 177 bits (449), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 98/339 (28%), Positives = 185/339 (54%), Gaps = 5/339 (1%)
Query: 214 ELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCL 273
+LF +M P++V + ++ + N++ V LF M G +L ++N++I+CL
Sbjct: 55 DLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCL 114
Query: 274 CKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTV 333
C+ + A ++ M++ G PD T +SL++G+C R+ A ++ M G + V
Sbjct: 115 CRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDV 174
Query: 334 VSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDE 393
V YN +I+G CKI V +A+ L+ ++ +GVR +TYN+L++GL +G+ A +L +
Sbjct: 175 VIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRD 234
Query: 394 MKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGR 453
M + ++ P++ T+ +ID K EA+KL+ + + + +N LI+GLC GR
Sbjct: 235 MVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGR 294
Query: 454 LDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNT 513
+D A ++ + KG +P VVTY+ +I+G C+ ++++ M + G + +T+NT
Sbjct: 295 VDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNT 354
Query: 514 LMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVV 552
++ G+ Q + E+ +M P+ T+SI++
Sbjct: 355 IIQGYFQAGRPDAAQEIFSRMDSR-----PNIRTYSILL 388
Score = 158 bits (400), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 94/310 (30%), Positives = 163/310 (52%), Gaps = 2/310 (0%)
Query: 243 NWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYN 302
N EE LF +M+ P P+++ F+ ++ + K + L M G+ D ++YN
Sbjct: 49 NLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYN 108
Query: 303 SLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISN 362
+++ C R A + M G + VV+ + LING+C+ V +A+ L ++
Sbjct: 109 IVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEM 168
Query: 363 GVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEA 422
G R V+ YNT++ G + G A +LFD M+ V D TYN L+ GLC + +A
Sbjct: 169 GFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDA 228
Query: 423 VKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHG 482
+L + M + F +ID K G+ A +L+ ++ ++ + P V TY+ +I+G
Sbjct: 229 ARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLING 288
Query: 483 LCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLV 542
LC G++++A L M GC P+VVT+NTL++GF ++ + + +L +MA +R LV
Sbjct: 289 LCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMA--QRGLV 346
Query: 543 PDDTTFSIVV 552
D T++ ++
Sbjct: 347 GDTITYNTII 356
Score = 114 bits (284), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 132/242 (54%), Gaps = 6/242 (2%)
Query: 347 LNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTY 406
+N+EE + L+ ++I + +++ ++ +LS + ++ LF M++ + DL +Y
Sbjct: 48 MNLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSY 107
Query: 407 NILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEI--FNCLIDGLCKAGRLDNAWELFHKL 464
NI+I+ LC+ C + + L + +M KF + ++ + LI+G C+ R+ +A +L K+
Sbjct: 108 NIVINCLCR--CSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKM 165
Query: 465 PQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKT 524
+ G P VV Y+ +I G C+ G + A + ME++G + VT+N+L+ G + +
Sbjct: 166 EEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRW 225
Query: 525 SKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKSSYRACLYVTIFQPS 584
S L+ M R++VP+ TF+ V+D+ K+ K+ E + + R C+ +F +
Sbjct: 226 SDAARLMRDMV--MRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYN 283
Query: 585 SL 586
SL
Sbjct: 284 SL 285
>sp|Q9SH60|PP103_ARATH Pentatricopeptide repeat-containing protein At1g64100
OS=Arabidopsis thaliana GN=At1g64100 PE=2 SV=2
Length = 666
Score = 320 bits (819), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 187/509 (36%), Positives = 275/509 (54%), Gaps = 34/509 (6%)
Query: 63 FGYMTHMQPSPPISSFN-LLFGAVAKNRHYDAV--------------ISFYRKLVSIGLL 107
FG +T + P + +FN LL G ++R +A+ ++ + ++V IGL
Sbjct: 164 FGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLT 223
Query: 108 PDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGN 167
P +T N LIN GLC+E R+ EA L M+ G+ DV+TYGT++NG C+ G+
Sbjct: 224 PVVITFNTLIN-------GLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGD 276
Query: 168 LSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPA 227
AL L KM E I K ++ YS IID LCK+G A+ LF EM +GI P
Sbjct: 277 TKSALNLLSKM-----EETHI-KPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPN 330
Query: 228 VVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLE 287
V +I GFC G W + L +M++ P++LTFN +I K GK+ EA L +
Sbjct: 331 VFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCD 390
Query: 288 LMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKIL 347
M+ R + PD TYNS++ G+C R D A+ +F M S VV++N +I+ YC+
Sbjct: 391 EMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPD----VVTFNTIIDVYCRAK 446
Query: 348 NVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYN 407
V+E M L R+I G+ TYNTL+ G + AQ LF EM + V PD T N
Sbjct: 447 RVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCN 506
Query: 408 ILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQK 467
IL+ G C+N ++EA++LF +++M+K + +N +I G+CK ++D AW+LF LP
Sbjct: 507 ILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIH 566
Query: 468 GLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKV 527
G+ P V TY++MI G C K + AN M+ NG P+ T+NTL+ G L+ + K
Sbjct: 567 GVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKS 626
Query: 528 VELLHKMAEPERNLVPDDTTFSIVVDLLA 556
+EL+ +M D T +V DL+
Sbjct: 627 IELISEMR--SNGFSGDAFTIKMVADLIT 653
Score = 190 bits (483), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 129/456 (28%), Positives = 212/456 (46%), Gaps = 62/456 (13%)
Query: 158 LINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFL 217
+I F R VA+ L++KM E I NI+S++I+I C + + F
Sbjct: 112 VIGVFVRMNRPDVAISLYRKM-----EIRRIP-LNIYSFNILIKCFCDCHKLSFSLSTFG 165
Query: 218 EMKGRGINPAVVVCTTLIHGFCCAGN---------------WEEVNGLFIEMLDLGPRPN 262
++ G P VV TL+HG C + E LF +M+++G P
Sbjct: 166 KLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPV 225
Query: 263 LLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDT------ 316
++TFN +I+ LC G++ EA L+ M+ +GL+ D TY ++++G C +G +
Sbjct: 226 VITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLS 285
Query: 317 -----------------------------AREIFLSMHSKGCKHTVVSYNILINGYCKIL 347
A+ +F M KG V +YN +I+G+C
Sbjct: 286 KMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFG 345
Query: 348 NVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYN 407
+A L R +I + V+T+N L+S + G+ A+KL DEM + PD TYN
Sbjct: 346 RWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYN 405
Query: 408 ILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQK 467
+I G CK+N +A +F ++ + FN +ID C+A R+D +L ++ ++
Sbjct: 406 SMIYGFCKHNRFDDAKHMFDLMASPD----VVTFNTIIDVYCRAKRVDEGMQLLREISRR 461
Query: 468 GLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKV 527
GLV TY+ +IHG C L A D M +G P+ +T N L++GF +N K +
Sbjct: 462 GLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEA 521
Query: 528 VELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
+EL + + +L D ++I++ + K K E
Sbjct: 522 LELFEVIQMSKIDL--DTVAYNIIIHGMCKGSKVDE 555
Score = 119 bits (299), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 133/291 (45%), Gaps = 17/291 (5%)
Query: 302 NSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIIS 361
N ++ + + R D A ++ M + + S+NILI +C + ++S + ++
Sbjct: 110 NKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTK 169
Query: 362 NGVRQTVITYNTLLSGLFQAGQA-------GY--------AQKLFDEMKLYNVEPDLSTY 406
G + V+T+NTLL GL + GY A LFD+M + P + T+
Sbjct: 170 LGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITF 229
Query: 407 NILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQ 466
N LI+GLC V EA L + + + + +++G+CK G +A L K+ +
Sbjct: 230 NTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEE 289
Query: 467 KGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSK 526
+ P VV YS +I LC+ G A M + G APNV T+N ++ GF + S
Sbjct: 290 THIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSD 349
Query: 527 VVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKSSYRACLY 577
LL M E E N PD TF+ ++ K+ K E + C++
Sbjct: 350 AQRLLRDMIEREIN--PDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIF 398
Score = 84.3 bits (207), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 113/231 (48%), Gaps = 17/231 (7%)
Query: 348 NVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYN 407
++++A+ + ++ + T + N ++ + + A L+ +M++ + ++ ++N
Sbjct: 86 SLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFN 145
Query: 408 ILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAW--------- 458
ILI C + + ++ F L F+ + FN L+ GLC R+ A
Sbjct: 146 ILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVET 205
Query: 459 ------ELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFN 512
LF ++ + GL P V+T++ +I+GLC +G++ +A + M G +VVT+
Sbjct: 206 GFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYG 265
Query: 513 TLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
T+++G + T + LL KM E ++ PD +S ++D L KD + +
Sbjct: 266 TIVNGMCKMGDTKSALNLLSKMEET--HIKPDVVIYSAIIDRLCKDGHHSD 314
Score = 72.8 bits (177), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 111/270 (41%), Gaps = 43/270 (15%)
Query: 37 PET-QLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVI 95
P+T N ++ CK ++A++ F M SP + +FN + + + D +
Sbjct: 399 PDTVTYNSMIYGFCKHN--RFDDAKHMFDLMA----SPDVVTFNTIIDVYCRAKRVDEGM 452
Query: 96 SFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITY 155
R++ GL+ + T N LI+ G C + + A LF+ MI+ GV PD IT
Sbjct: 453 QLLREISRRGLVANTTTYNTLIH-------GFCEVDNLNAAQDLFQEMISHGVCPDTITC 505
Query: 156 GTLINGFCRTGNLSVALRLHK--KMVSGDYE--------NGLIS---------------- 189
L+ GFC L AL L + +M D + +G+
Sbjct: 506 NILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPI 565
Query: 190 ---KTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEE 246
+ ++ +Y+++I C + + A LF +MK G P TLI G AG ++
Sbjct: 566 HGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDK 625
Query: 247 VNGLFIEMLDLGPRPNLLTFNVMIDCLCKG 276
L EM G + T ++ D + G
Sbjct: 626 SIELISEMRSNGFSGDAFTIKMVADLITDG 655
>sp|Q9CAN6|PPR97_ARATH Pentatricopeptide repeat-containing protein At1g63070,
mitochondrial OS=Arabidopsis thaliana GN=At1g63070 PE=1
SV=1
Length = 590
Score = 309 bits (792), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 185/580 (31%), Positives = 299/580 (51%), Gaps = 46/580 (7%)
Query: 8 RCLFSSETVSKVKLSSLFKSPRQIAAVSSPETQLNEFLHENCKSGIIN---LNEARYFFG 64
+CL + K + R A SS + + EN ++ L++A FG
Sbjct: 11 KCLHRHTVLLKGNPRTTLCWERSFAGASSDDCR------ENLSRKVLQDLKLDDAIGLFG 64
Query: 65 YMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKE 124
M +P P I F+ L A+AK +D VIS ++ ++G+ + T +I IN F +
Sbjct: 65 DMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRS 124
Query: 125 R----------------------------GLCVENRIKEATWLFKNMIAFGVRPDVITYG 156
+ G C NRI EA L M+ G +PD +T+
Sbjct: 125 QLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFT 184
Query: 157 TLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELF 216
TL++G + S A+ L ++MV + L++ Y +I+ LCK G D A L
Sbjct: 185 TLVHGLFQHNKASEAVALVERMVVKGCQPDLVT------YGAVINGLCKRGEPDLALNLL 238
Query: 217 LEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKG 276
+M+ I VV+ T+I G C + ++ LF +M G +P++ T+N +I CLC
Sbjct: 239 NKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNY 298
Query: 277 GKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSM-HSKGCKHTVVS 335
G+ ++A+ LL M+++ +NPD +N+L+D + G++ A +++ M SK C VV+
Sbjct: 299 GRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVA 358
Query: 336 YNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMK 395
YN LI G+CK VEE M ++R++ G+ +TY TL+ G FQA AQ +F +M
Sbjct: 359 YNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMV 418
Query: 396 LYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLD 455
V PD+ TYNIL+DGLC N V+ A+ +F ++ + I + +I+ LCKAG+++
Sbjct: 419 SDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVE 478
Query: 456 NAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLM 515
+ W+LF L KG+ P VVTY+ M+ G CRKG E+A+ + M+++G PN T+NTL+
Sbjct: 479 DGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLI 538
Query: 516 HGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLL 555
L++ + EL+ +M D +TF +V ++L
Sbjct: 539 RARLRDGDEAASAELIKEMRSC--GFAGDASTFGLVTNML 576
Score = 214 bits (545), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 126/447 (28%), Positives = 229/447 (51%), Gaps = 9/447 (2%)
Query: 118 NCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKK 177
+C N R + + ++ +A LF +M+ P ++ + L++ + + + L ++
Sbjct: 41 DCRENLSRKVLQDLKLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQ 100
Query: 178 MVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHG 237
M +N IS N+++YSI I+ C+ + A + +M G P++V +L++G
Sbjct: 101 M-----QNLGISH-NLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNG 154
Query: 238 FCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPD 297
FC E L +M+++G +P+ +TF ++ L + K +EA L+E M+ +G PD
Sbjct: 155 FCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPD 214
Query: 298 RFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYR 357
TY ++++G C G D A + M + VV YN +I+G CK ++++A L+
Sbjct: 215 LVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFN 274
Query: 358 QIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNN 417
++ + G++ V TYN L+S L G+ A +L +M N+ PDL +N LID K
Sbjct: 275 KMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEG 334
Query: 418 CVQEAVKLFHMLEMNKFEF-GIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTY 476
+ EA KL+ + +K F + +N LI G CK R++ E+F ++ Q+GLV VTY
Sbjct: 335 KLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTY 394
Query: 477 SIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAE 536
+ +IHG + + A M +G P+++T+N L+ G N + + M
Sbjct: 395 TTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQ- 453
Query: 537 PERNLVPDDTTFSIVVDLLAKDEKYHE 563
+R++ D T++ +++ L K K +
Sbjct: 454 -KRDMKLDIVTYTTMIEALCKAGKVED 479
Score = 75.9 bits (185), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 98/233 (42%), Gaps = 36/233 (15%)
Query: 73 PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
P + ++N L K + + + +R++ GL+ + +T LI+ G
Sbjct: 354 PDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIH-------GFFQARD 406
Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLIS--- 189
A +FK M++ GV PD++TY L++G C GN+ AL + + M D + +++
Sbjct: 407 CDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTT 466
Query: 190 --------------------------KTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRG 223
K N+ +Y+ ++ C++GL ++A LF+EMK G
Sbjct: 467 MIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDG 526
Query: 224 INPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKG 276
P TLI G+ L EM G + TF ++ + L G
Sbjct: 527 PLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTFGLVTNMLHDG 579
>sp|Q9FMD3|PP389_ARATH Pentatricopeptide repeat-containing protein At5g16640,
mitochondrial OS=Arabidopsis thaliana GN=At5g16640 PE=2
SV=1
Length = 504
Score = 307 bits (786), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 166/464 (35%), Positives = 263/464 (56%), Gaps = 15/464 (3%)
Query: 46 HENCKSGI--INLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVS 103
E ++GI + L+++ F +M +P P I+ F+ L A++K + YD VI + ++
Sbjct: 50 REMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQM 109
Query: 104 IGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFC 163
+G+ + T NIL+NCF C +++ A MI G P ++T+G+L+NGFC
Sbjct: 110 LGIPHNLCTCNILLNCF-------CRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFC 162
Query: 164 RTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRG 223
R + AL + +MV G+ K N+ Y+ IID LCK VD A +L M+ G
Sbjct: 163 RGDRVYDALYMFDQMV------GMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDG 216
Query: 224 INPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEAN 283
I P VV +LI G C +G W + + M P++ TFN +ID K G+++EA
Sbjct: 217 IGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAE 276
Query: 284 GLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGY 343
E MI+R L+PD TY+ L+ G C+ R+D A E+F M SKGC VV+Y+ILINGY
Sbjct: 277 EFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGY 336
Query: 344 CKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDL 403
CK VE M L+ ++ GV + +TY L+ G +AG+ A+++F M V P++
Sbjct: 337 CKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNI 396
Query: 404 STYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHK 463
TYN+L+ GLC N +++A+ + ++ N + I +N +I G+CKAG + +AW+++
Sbjct: 397 ITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCS 456
Query: 464 LPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPN 507
L +GL+P + TY+ M+ GL +KG +A+ M+++G PN
Sbjct: 457 LNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILPN 500
Score = 196 bits (497), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 122/438 (27%), Positives = 224/438 (51%), Gaps = 8/438 (1%)
Query: 132 RIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKT 191
++ ++ LF +M+ P + + L++ + V + L ++M L
Sbjct: 61 KLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQM------QMLGIPH 114
Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
N+ + +I+++ C+ + A +M G P++V +L++GFC + +F
Sbjct: 115 NLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMF 174
Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
+M+ +G +PN++ +N +ID LCK +++ A LL M + G+ PD TYNSL+ G C
Sbjct: 175 DQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSS 234
Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
GR A + M + V ++N LI+ K V EA Y ++I + ++TY
Sbjct: 235 GRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTY 294
Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
+ L+ GL + A+++F M PD+ TY+ILI+G CK+ V+ +KLF +
Sbjct: 295 SLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQ 354
Query: 432 NKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEK 491
+ LI G C+AG+L+ A E+F ++ G+ P ++TY++++HGLC GK+EK
Sbjct: 355 RGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEK 414
Query: 492 ANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIV 551
A L M+KNG ++VT+N ++ G + + + ++ + + L+PD T++ +
Sbjct: 415 ALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLN--CQGLMPDIWTYTTM 472
Query: 552 VDLLAKDEKYHECSAVSK 569
+ L K E A+ +
Sbjct: 473 MLGLYKKGLRREADALFR 490
Score = 103 bits (257), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 120/221 (54%), Gaps = 6/221 (2%)
Query: 345 KILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLS 404
+ + +++++ L+ ++ ++ ++ LLS + + + L+++M++ + +L
Sbjct: 58 RFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLC 117
Query: 405 TYNILIDGLCKNNCVQEAVKLFHMLEMNKF--EFGIEIFNCLIDGLCKAGRLDNAWELFH 462
T NIL++ C+ C Q ++ L + +M K E I F L++G C+ R+ +A +F
Sbjct: 118 TCNILLNCFCR--CSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFD 175
Query: 463 KLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNN 522
++ G P VV Y+ +I GLC+ +++ A D L MEK+G P+VVT+N+L+ G +
Sbjct: 176 QMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSG 235
Query: 523 KTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
+ S ++ M +R + PD TF+ ++D K+ + E
Sbjct: 236 RWSDATRMVSCMT--KREIYPDVFTFNALIDACVKEGRVSE 274
>sp|Q9LUR2|PP238_ARATH Putative pentatricopeptide repeat-containing protein At3g16710,
mitochondrial OS=Arabidopsis thaliana GN=At3g16710 PE=3
SV=1
Length = 507
Score = 303 bits (775), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 162/477 (33%), Positives = 257/477 (53%), Gaps = 19/477 (3%)
Query: 31 IAAVSSPETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRH 90
I A SS L LH + N+A F M H +P P I F L +AK
Sbjct: 45 IRAFSSYRKILRNGLHN------LQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNR 98
Query: 91 YDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRP 150
YD VIS + ++ +G+ P T NI+++C +C+ ++ A+ M+ G P
Sbjct: 99 YDVVISLFEQMQILGIPPLLCTCNIVMHC-------VCLSSQPCRASCFLGKMMKLGFEP 151
Query: 151 DVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVD 210
D++T+ +L+NG+C + A+ L +++ G+ K N+ +Y+ +I LCK ++
Sbjct: 152 DLVTFTSLLNGYCHWNRIEDAIALFDQIL------GMGFKPNVVTYTTLIRCLCKNRHLN 205
Query: 211 KAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMI 270
A ELF +M G P VV L+ G C G W + L +M+ PN++TF +I
Sbjct: 206 HAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALI 265
Query: 271 DCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCK 330
D K GK+ EA L +MIQ + PD FTY SL++G C+ G +D AR++F M GC
Sbjct: 266 DAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCY 325
Query: 331 HTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKL 390
V Y LI+G+CK VE+ M ++ ++ GV ITY L+ G G+ AQ++
Sbjct: 326 PNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEV 385
Query: 391 FDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCK 450
F++M PD+ TYN+L+DGLC N V++A+ +F + + + I + +I G+CK
Sbjct: 386 FNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCK 445
Query: 451 AGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPN 507
G++++A++LF L KG+ P V+TY+ MI G CR+G + +A+ M+++G PN
Sbjct: 446 LGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPN 502
Score = 186 bits (473), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 106/383 (27%), Positives = 197/383 (51%), Gaps = 7/383 (1%)
Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
+I ++ ++ + K D LF +M+ GI P + C ++H C + +
Sbjct: 82 SIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFL 141
Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
+M+ LG P+L+TF +++ C +I +A L + ++ G P+ TY +L+ C
Sbjct: 142 GKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKN 201
Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
++ A E+F M + G + VV+YN L+ G C+I +A L R ++ + VIT+
Sbjct: 202 RHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITF 261
Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
L+ + G+ A++L++ M +V PD+ TY LI+GLC + EA ++F+++E
Sbjct: 262 TALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMER 321
Query: 432 NKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEK 491
N I+ LI G CK+ R+++ ++F+++ QKG+V +TY+++I G C G+ +
Sbjct: 322 NGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDV 381
Query: 492 ANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIV 551
A + M P++ T+N L+ G N K K + + M + E ++ + T++I+
Sbjct: 382 AQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDI--NIVTYTII 439
Query: 552 VDLLAKDEKYHE-----CSAVSK 569
+ + K K + CS SK
Sbjct: 440 IQGMCKLGKVEDAFDLFCSLFSK 462
>sp|Q9FLL3|PP412_ARATH Pentatricopeptide repeat-containing protein At5g41170,
mitochondrial OS=Arabidopsis thaliana GN=At5g41170 PE=2
SV=1
Length = 527
Score = 300 bits (769), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 170/486 (34%), Positives = 271/486 (55%), Gaps = 16/486 (3%)
Query: 54 INLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTL 113
+ NEA F +M +P P I F L +AK + +D VI+ L +G+ D T
Sbjct: 51 LQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTC 110
Query: 114 NILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALR 173
N+L+NCF C ++ A+ M+ G PD++T+ +LINGFC + A+
Sbjct: 111 NLLMNCF-------CQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMS 163
Query: 174 LHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTT 233
+ +MV E G+ K ++ Y+ IIDSLCK G V+ A LF +M+ GI P VV+ T+
Sbjct: 164 MVNQMV----EMGI--KPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTS 217
Query: 234 LIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRG 293
L++G C +G W + + L M +P+++TFN +ID K GK +A L MI+
Sbjct: 218 LVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMS 277
Query: 294 LNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAM 353
+ P+ FTY SL++G+C+ G +D AR++F M +KGC VV+Y LING+CK V++AM
Sbjct: 278 IAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAM 337
Query: 354 SLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGL 413
++ ++ G+ ITY TL+ G Q G+ AQ++F M V P++ TYN+L+ L
Sbjct: 338 KIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCL 397
Query: 414 CKNNCVQEAVKLFHML---EMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLV 470
C N V++A+ +F + EM+ I +N L+ GLC G+L+ A +F + ++ +
Sbjct: 398 CYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMD 457
Query: 471 PTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVEL 530
++TY+I+I G+C+ GK++ A + + G PNVVT+ T++ G + + L
Sbjct: 458 IGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVL 517
Query: 531 LHKMAE 536
KM E
Sbjct: 518 FRKMKE 523
Score = 197 bits (502), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 115/410 (28%), Positives = 204/410 (49%), Gaps = 9/410 (2%)
Query: 132 RIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKT 191
+ EA LF +M+ P +I + L+N + V + L D+ +
Sbjct: 52 QFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINL------CDHLQIMGVSH 105
Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
++++ +++++ C+ A +M G P +V T+LI+GFC EE +
Sbjct: 106 DLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMV 165
Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
+M+++G +P+++ + +ID LCK G +N A L + M G+ PD Y SL++G C
Sbjct: 166 NQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNS 225
Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
GR A + M + K V+++N LI+ + K +A LY ++I + + TY
Sbjct: 226 GRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTY 285
Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
+L++G G A+++F M+ PD+ Y LI+G CK V +A+K+F+ +
Sbjct: 286 TSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQ 345
Query: 432 NKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEK 491
+ LI G + G+ + A E+F + +G+ P + TY++++H LC GK++K
Sbjct: 346 KGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKK 405
Query: 492 ANDFLLYMEK---NGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPE 538
A M+K +G APN+ T+N L+HG N K K + + M + E
Sbjct: 406 ALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKRE 455
Score = 190 bits (483), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 102/370 (27%), Positives = 195/370 (52%), Gaps = 1/370 (0%)
Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
+I ++ +++ + K D L ++ G++ + C L++ FC + +
Sbjct: 71 SIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFL 130
Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
+M+ LG P+++TF +I+ C G ++ EA ++ M++ G+ PD Y +++D C
Sbjct: 131 GKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKN 190
Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
G ++ A +F M + G + VV Y L+NG C +A SL R + ++ VIT+
Sbjct: 191 GHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITF 250
Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
N L+ + G+ A++L++EM ++ P++ TY LI+G C CV EA ++F+++E
Sbjct: 251 NALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMET 310
Query: 432 NKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEK 491
+ + LI+G CK ++D+A ++F+++ QKGL +TY+ +I G + GK
Sbjct: 311 KGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNV 370
Query: 492 ANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERN-LVPDDTTFSI 550
A + +M G PN+ T+N L+H N K K + + M + E + + P+ T+++
Sbjct: 371 AQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNV 430
Query: 551 VVDLLAKDEK 560
++ L + K
Sbjct: 431 LLHGLCYNGK 440
Score = 135 bits (340), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 95/320 (29%), Positives = 157/320 (49%), Gaps = 20/320 (6%)
Query: 49 CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
C SG +A MT + P + +FN L A K + Y +++ + + P
Sbjct: 223 CNSG--RWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAP 280
Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
+ T LIN G C+E + EA +F M G PDV+ Y +LINGFC+ +
Sbjct: 281 NIFTYTSLIN-------GFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKV 333
Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
A+++ +M + GL N +Y+ +I + G + A+E+F M RG+ P +
Sbjct: 334 DDAMKIFYEMS----QKGLTG--NTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNI 387
Query: 229 VVCTTLIHGFCCAGNWEEVNGLFIEM----LDLGPRPNLLTFNVMIDCLCKGGKINEANG 284
L+H C G ++ +F +M +D G PN+ T+NV++ LC GK+ +A
Sbjct: 388 RTYNVLLHCLCYNGKVKKALMIFEDMQKREMD-GVAPNIWTYNVLLHGLCYNGKLEKALM 446
Query: 285 LLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYC 344
+ E M +R ++ TY ++ G C G++ A +F S+ SKG K VV+Y +I+G
Sbjct: 447 VFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLF 506
Query: 345 KILNVEEAMSLYRQIISNGV 364
+ EA L+R++ +GV
Sbjct: 507 REGLKHEAHVLFRKMKEDGV 526
Score = 97.4 bits (241), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 118/249 (47%), Gaps = 3/249 (1%)
Query: 338 ILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLY 397
IL NG L EA+ L+ ++ + ++I + LL+ + + + L D +++
Sbjct: 43 ILRNGL-HSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIM 101
Query: 398 NVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNA 457
V DL T N+L++ C+++ A + FE I F LI+G C R++ A
Sbjct: 102 GVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEA 161
Query: 458 WELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHG 517
+ +++ + G+ P VV Y+ +I LC+ G + A ME G P+VV + +L++G
Sbjct: 162 MSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNG 221
Query: 518 FLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKSSYRACLY 577
+ + LL M +R + PD TF+ ++D K+ K+ + + R +
Sbjct: 222 LCNSGRWRDADSLLRGMT--KRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIA 279
Query: 578 VTIFQPSSL 586
IF +SL
Sbjct: 280 PNIFTYTSL 288
Score = 90.5 bits (223), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 121/255 (47%), Gaps = 16/255 (6%)
Query: 41 LNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRK 100
+N F E C ++EAR F M P + ++ L K + D + + +
Sbjct: 289 INGFCMEGC------VDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYE 342
Query: 101 LVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLIN 160
+ GL + +T LI FG + A +F +M++ GV P++ TY L++
Sbjct: 343 MSQKGLTGNTITYTTLIQGFGQ-------VGKPNVAQEVFSHMVSRGVPPNIRTYNVLLH 395
Query: 161 GFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMK 220
C G + AL + + M + + NI++Y++++ LC G ++KA +F +M+
Sbjct: 396 CLCYNGKVKKALMIFEDMQKREMDG---VAPNIWTYNVLLHGLCYNGKLEKALMVFEDMR 452
Query: 221 GRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKIN 280
R ++ ++ T +I G C AG + LF + G +PN++T+ MI L + G +
Sbjct: 453 KREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKH 512
Query: 281 EANGLLELMIQRGLN 295
EA+ L M + G++
Sbjct: 513 EAHVLFRKMKEDGVS 527
>sp|P0C7R3|PP106_ARATH Pentatricopeptide repeat-containing protein At1g64583,
mitochondrial OS=Arabidopsis thaliana GN=At1g64583 PE=2
SV=1
Length = 512
Score = 300 bits (767), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 170/461 (36%), Positives = 253/461 (54%), Gaps = 21/461 (4%)
Query: 44 FLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVS 103
FLH I +A F M H QP P I F L A A R Y+ VI F +K+
Sbjct: 46 FLHS------IRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMEL 99
Query: 104 IGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFC 163
G+ D + ILI+CF C +R+ A + M+ G P ++T+G+L++GFC
Sbjct: 100 YGISHDLYSFTILIHCF-------CRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFC 152
Query: 164 RTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRG 223
+ A L MV YE N+ Y+ +ID LCK G ++ A EL EM+ +G
Sbjct: 153 LVNRIGDAFSLVILMVKSGYE------PNVVVYNTLIDGLCKNGELNIALELLNEMEKKG 206
Query: 224 INPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEAN 283
+ VV TL+ G C +G W + + +M+ P+++TF +ID K G ++EA
Sbjct: 207 LGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQ 266
Query: 284 GLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGY 343
L + MIQ ++P+ TYNS+++G C+ GR+ A++ F M SKGC VV+YN LI+G+
Sbjct: 267 ELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGF 326
Query: 344 CKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDL 403
CK V+E M L++++ G + TYNTL+ G Q G+ A +F M V PD+
Sbjct: 327 CKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDI 386
Query: 404 STYNILIDGLCKNNCVQEA-VKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFH 462
T+ IL+ GLC N ++ A VK M E K+ GI +N +I GLCKA +++ AWELF
Sbjct: 387 ITHCILLHGLCVNGEIESALVKFDDMRESEKY-IGIVAYNIMIHGLCKADKVEKAWELFC 445
Query: 463 KLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNG 503
+LP +G+ P TY+IMI GLC+ G +A++ + M++ G
Sbjct: 446 RLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEEG 486
Score = 202 bits (515), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 134/473 (28%), Positives = 221/473 (46%), Gaps = 52/473 (10%)
Query: 132 RIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKT 191
R ++A LF M+ P ++ + L+ + +KM E IS
Sbjct: 51 RFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKM-----ELYGISH- 104
Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
+++S++I+I C+ + A + +M G P++V +L+HGFC + L
Sbjct: 105 DLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLV 164
Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
I M+ G PN++ +N +ID LCK G++N A LL M ++GL D TYN+L+ G C
Sbjct: 165 ILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYS 224
Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
GR A + M + VV++ LI+ + K N++EA LY+++I + V +TY
Sbjct: 225 GRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTY 284
Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
N++++GL G+ A+K FD M P++ TYN LI G CK V E +KLF +
Sbjct: 285 NSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSC 344
Query: 432 NKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVT---------------- 475
F I +N LI G C+ G+L A ++F + + + P ++T
Sbjct: 345 EGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIES 404
Query: 476 -------------------YSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMH 516
Y+IMIHGLC+ K+EKA + + G P+ T+ ++
Sbjct: 405 ALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMIL 464
Query: 517 GFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSK 569
G +N + EL+ +M E I+ + A+D+ E S+ +K
Sbjct: 465 GLCKNGPRREADELIRRMKEE-----------GIICQMNAEDDHLEEHSSSNK 506
Score = 158 bits (399), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 101/351 (28%), Positives = 168/351 (47%), Gaps = 37/351 (10%)
Query: 237 GFCCAGNWEEVNGLFIEMLDLGPRP----------------------------------- 261
GF + +E+ LF EM+ P P
Sbjct: 45 GFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISH 104
Query: 262 NLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIF 321
+L +F ++I C C+ +++ A +L M++ G P T+ SL+ G+CLV RI A +
Sbjct: 105 DLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLV 164
Query: 322 LSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQA 381
+ M G + VV YN LI+G CK + A+ L ++ G+ V+TYNTLL+GL +
Sbjct: 165 ILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYS 224
Query: 382 GQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIF 441
G+ A ++ +M ++ PD+ T+ LID K + EA +L+ + + + +
Sbjct: 225 GRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTY 284
Query: 442 NCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEK 501
N +I+GLC GRL +A + F + KG P VVTY+ +I G C+ +++ M
Sbjct: 285 NSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSC 344
Query: 502 NGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVV 552
G ++ T+NTL+HG+ Q K +++ M R + PD T I++
Sbjct: 345 EGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMV--SRRVTPDIITHCILL 393
Score = 103 bits (257), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 121/250 (48%), Gaps = 2/250 (0%)
Query: 304 LMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNG 363
L G+ R + A +F M ++V + L+ + E + +++ G
Sbjct: 42 LRTGFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYG 101
Query: 364 VRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAV 423
+ + ++ L+ + + +A + +M EP + T+ L+ G C N + +A
Sbjct: 102 ISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAF 161
Query: 424 KLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGL 483
L ++ + +E + ++N LIDGLCK G L+ A EL +++ +KGL VVTY+ ++ GL
Sbjct: 162 SLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGL 221
Query: 484 CRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVP 543
C G+ A L M K P+VVTF L+ F++ + EL +M + + P
Sbjct: 222 CYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVD--P 279
Query: 544 DDTTFSIVVD 553
++ T++ +++
Sbjct: 280 NNVTYNSIIN 289
>sp|Q76C99|RF1_ORYSI Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica GN=Rf1
PE=2 SV=1
Length = 791
Score = 290 bits (742), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 173/520 (33%), Positives = 269/520 (51%), Gaps = 39/520 (7%)
Query: 73 PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
P ++N + + I F +K+ S G+ PD +T ++L++ LC R
Sbjct: 264 PDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDY-------LCKNGR 316
Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL----------------------SV 170
EA +F +M G++P++ TYGTL+ G+ G L S+
Sbjct: 317 CMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSI 376
Query: 171 ALRLHKKMVSGDYENGLISKT-------NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRG 223
+ + K D + SK N +Y +I LCK G V+ A F +M G
Sbjct: 377 LICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEG 436
Query: 224 INPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEAN 283
++P +V +LIHG C WE L +EMLD G N + FN +ID CK G++ E+
Sbjct: 437 LSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESE 496
Query: 284 GLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGY 343
L ELM++ G+ P+ TYN+L++GYCL G++D A ++ M S G K V+Y+ LINGY
Sbjct: 497 KLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGY 556
Query: 344 CKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDL 403
CKI +E+A+ L++++ S+GV +ITYN +L GLFQ + A++L+ + + +L
Sbjct: 557 CKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIEL 616
Query: 404 STYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHK 463
STYNI++ GLCKN +A+++F L + + FN +ID L K GR D A +LF
Sbjct: 617 STYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVA 676
Query: 464 LPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNK 523
GLVP TY +M + +G LE+ + L ME NGC + N ++ LQ +
Sbjct: 677 FSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGE 736
Query: 524 TSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
++ L + E +L + +T S+ +DLL+ KY E
Sbjct: 737 ITRAGTYLSMIDEKHFSL--EASTASLFIDLLSGG-KYQE 773
Score = 216 bits (549), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 154/537 (28%), Positives = 247/537 (45%), Gaps = 56/537 (10%)
Query: 58 EARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIG---LLPDFLTLN 114
+AR+ F + I N VA++ A +S Y ++ G + PD T
Sbjct: 33 DARHVFDELLRRGRGASIYGLNRALADVARDSPA-AAVSRYNRMARAGADEVTPDLCTYG 91
Query: 115 ILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRL 174
ILI C C R+ N+I G R D I + L+ G C S A+ +
Sbjct: 92 ILIGC-------CCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDI 144
Query: 175 HKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEM---KGRGINPAVVVC 231
+ ++ E G I N+FSY+I++ LC E +A EL M +G G P VV
Sbjct: 145 VLRRMT---ELGCIP--NVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSY 199
Query: 232 TTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQ 291
TT+I+GF G+ ++ + EMLD G P+++T+N +I LCK +++A +L M++
Sbjct: 200 TTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVK 259
Query: 292 RGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEE 351
G+ PD TYNS++ GYC G+ A M S G + VV+Y++L++ CK E
Sbjct: 260 NGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCME 319
Query: 352 AMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILID 411
A ++ + G++ + TY TLL G G L D M + PD ++ILI
Sbjct: 320 ARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILIC 379
Query: 412 GLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVP 471
K V +A+ +F + + +I LCK+GR+++A F ++ +GL P
Sbjct: 380 AYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSP 439
Query: 472 TVVTYSIMIHGLCRKGKLEKANDFLL---------------------------------- 497
+ Y+ +IHGLC K E+A + +L
Sbjct: 440 GNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLF 499
Query: 498 -YMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
M + G PNV+T+NTL++G+ K + ++LL M L P+ T+S +++
Sbjct: 500 ELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSV--GLKPNTVTYSTLIN 554
Score = 45.8 bits (107), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 63/154 (40%), Gaps = 47/154 (30%)
Query: 457 AWELFHKLPQKG---LVPTVVTYSIMIHGLCRKGKLE----------------------- 490
A ++++ + G + P + TY I+I CR G+L+
Sbjct: 68 AVSRYNRMARAGADEVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTP 127
Query: 491 ------------KANDFLL-YMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEP 537
A D +L M + GC PNV ++N L+ G N++ + +ELLH MA+
Sbjct: 128 LLKGLCADKRTSDAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADD 187
Query: 538 ERNLVPDD-TTFSIVVDLLAKD-------EKYHE 563
P D +++ V++ K+ YHE
Sbjct: 188 RGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHE 221
>sp|Q9SHK2|PPR17_ARATH Pentatricopeptide repeat-containing protein At1g06580
OS=Arabidopsis thaliana GN=At1g06580 PE=2 SV=1
Length = 500
Score = 287 bits (735), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 169/464 (36%), Positives = 252/464 (54%), Gaps = 16/464 (3%)
Query: 46 HENCKSGI--INLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVS 103
E +SG+ I N+A F M P P I F+ L A+AK Y+AVIS +R L
Sbjct: 48 RERLRSGLHSIKFNDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEM 107
Query: 104 IGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFC 163
+G+ D + LI+CF C R+ A M+ G P ++T+G+L+NGFC
Sbjct: 108 LGISHDLYSFTTLIDCF-------CRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFC 160
Query: 164 RTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRG 223
A+ L ++V YE N+ Y+ IIDSLC++G V+ A ++ MK G
Sbjct: 161 HVNRFYEAMSLVDQIVGLGYE------PNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMG 214
Query: 224 INPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEAN 283
I P VV +LI +G W + +M+ +G P+++TF+ +ID K G++ EA
Sbjct: 215 IRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAK 274
Query: 284 GLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGY 343
MIQR +NP+ TYNSL++G C+ G +D A+++ + SKG V+YN LINGY
Sbjct: 275 KQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGY 334
Query: 344 CKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDL 403
CK V++ M + + +GV TYNTL G QAG+ A+K+ M V PD+
Sbjct: 335 CKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDM 394
Query: 404 STYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHK 463
T+NIL+DGLC + + +A+ L+ +K GI +N +I GLCKA ++++AW LF
Sbjct: 395 YTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCS 454
Query: 464 LPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEK-NGCAP 506
L KG+ P V+TY M+ GL RK +A++ M+K +G P
Sbjct: 455 LALKGVSPDVITYITMMIGLRRKRLWREAHELYRKMQKEDGLMP 498
Score = 171 bits (433), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 111/434 (25%), Positives = 212/434 (48%), Gaps = 12/434 (2%)
Query: 132 RIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRL--HKKMVSGDYENGLIS 189
+ +A LF +M P ++ + L+ + + L H +M+ ++
Sbjct: 59 KFNDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHD----- 113
Query: 190 KTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNG 249
++S++ +ID C+ + A +M G P++V +L++GFC + E
Sbjct: 114 ---LYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMS 170
Query: 250 LFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYC 309
L +++ LG PN++ +N +ID LC+ G++N A +L+ M + G+ PD TYNSL+
Sbjct: 171 LVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLF 230
Query: 310 LVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVI 369
G + I M G V++++ LI+ Y K + EA Y ++I V ++
Sbjct: 231 HSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIV 290
Query: 370 TYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHML 429
TYN+L++GL G A+K+ + + P+ TYN LI+G CK V + +K+ ++
Sbjct: 291 TYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVM 350
Query: 430 EMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKL 489
+ + +N L G C+AG+ A ++ ++ G+ P + T++I++ GLC GK+
Sbjct: 351 SRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKI 410
Query: 490 EKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFS 549
KA L ++K+ ++T+N ++ G + +K L +A + + PD T+
Sbjct: 411 GKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLA--LKGVSPDVITYI 468
Query: 550 IVVDLLAKDEKYHE 563
++ L + + E
Sbjct: 469 TMMIGLRRKRLWRE 482
>sp|Q0WKZ3|PP105_ARATH Pentatricopeptide repeat-containing protein At1g64580
OS=Arabidopsis thaliana GN=At1g64580 PE=2 SV=1
Length = 523
Score = 285 bits (729), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 168/483 (34%), Positives = 259/483 (53%), Gaps = 17/483 (3%)
Query: 54 INLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTL 113
I ++A F M +P P I F + +AK +D VI Y K+ ++G+ D +
Sbjct: 58 IKFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSF 117
Query: 114 NILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALR 173
ILI+CF C +R+ A L M+ G RP ++T G+L+NGFC+ A+
Sbjct: 118 TILIHCF-------CRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVS 170
Query: 174 LHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTT 233
L M +G N+ Y+ +I+ LCK ++ A E+F M+ +GI V T
Sbjct: 171 LVDSM------DGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNT 224
Query: 234 LIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRG 293
LI G +G W + L +M+ PN++ F +ID K G + EA L + MI+R
Sbjct: 225 LISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRS 284
Query: 294 LNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAM 353
+ P+ FTYNSL++G+C+ G + A+ +F M SKGC VV+YN LI G+CK VE+ M
Sbjct: 285 VVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGM 344
Query: 354 SLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGL 413
L+ ++ G+ TYNTL+ G QAG+ AQK+F+ M V PD+ TYNIL+D L
Sbjct: 345 KLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCL 404
Query: 414 CKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTV 473
C N +++A+ + L+ ++ + I +N +I GLC+ +L AW LF L +KG+ P
Sbjct: 405 CNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDA 464
Query: 474 VTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHK 533
+ Y MI GLCRKG +A+ M+++G P+ ++ L+++ TS EL+
Sbjct: 465 IAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYDET----LRDHYTSLSAELIKA 520
Query: 534 MAE 536
E
Sbjct: 521 AHE 523
Score = 177 bits (450), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 108/382 (28%), Positives = 194/382 (50%), Gaps = 2/382 (0%)
Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
+I ++ ++ + K D L+ +M+ GI+ + T LIH FC L
Sbjct: 78 SIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALL 137
Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
+M+ LG RP+++T +++ C+G + EA L++ M G P+ YN++++G C
Sbjct: 138 GKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKN 197
Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
++ A E+F M KG + V+YN LI+G +A L R ++ + VI +
Sbjct: 198 RDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFF 257
Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
L+ + G A+ L+ EM +V P++ TYN LI+G C + C+ +A +F ++
Sbjct: 258 TALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVS 317
Query: 432 NKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEK 491
+ +N LI G CK+ R+++ +LF ++ +GLV TY+ +IHG C+ GKL
Sbjct: 318 KGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNV 377
Query: 492 ANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIV 551
A M G +P++VT+N L+ N K K + ++ + + E ++ D T++I+
Sbjct: 378 AQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDV--DIITYNII 435
Query: 552 VDLLAKDEKYHECSAVSKSSYR 573
+ L + +K E + +S R
Sbjct: 436 IQGLCRTDKLKEAWCLFRSLTR 457
Score = 129 bits (324), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 88/309 (28%), Positives = 155/309 (50%), Gaps = 2/309 (0%)
Query: 244 WEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNS 303
+++ LF EML P P+++ F ++ + K K + L M G++ D +++
Sbjct: 60 FDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTI 119
Query: 304 LMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNG 363
L+ +C R+ A + M G + ++V+ L+NG+C+ +EA+SL + G
Sbjct: 120 LIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFG 179
Query: 364 VRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAV 423
V+ YNT+++GL + A ++F M+ + D TYN LI GL + +A
Sbjct: 180 FVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAA 239
Query: 424 KLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGL 483
+L + K + + F LID K G L A L+ ++ ++ +VP V TY+ +I+G
Sbjct: 240 RLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGF 299
Query: 484 CRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVP 543
C G L A M GC P+VVT+NTL+ GF ++ + ++L +M + LV
Sbjct: 300 CIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMT--YQGLVG 357
Query: 544 DDTTFSIVV 552
D T++ ++
Sbjct: 358 DAFTYNTLI 366
Score = 89.7 bits (221), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 129/280 (46%), Gaps = 18/280 (6%)
Query: 288 LMIQRGLNPDRFTYNSLMDG--------------YCLVGRIDTAREIFLSMHSKGCKHTV 333
L+++RG NP+ S +C+ + D A +F M ++
Sbjct: 22 LLLERGNNPETSLSRSFSGASHHHHYRERLRNELHCI--KFDDAFSLFCEMLQSRPIPSI 79
Query: 334 VSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDE 393
V + ++ K+ + + LY ++ + G+ + ++ L+ + + A L +
Sbjct: 80 VDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGK 139
Query: 394 MKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGR 453
M P + T L++G C+ N QEAV L ++ F + I+N +I+GLCK
Sbjct: 140 MMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRD 199
Query: 454 LDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNT 513
L+NA E+F+ + +KG+ VTY+ +I GL G+ A L M K PNV+ F
Sbjct: 200 LNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTA 259
Query: 514 LMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
L+ F++ + L +M R++VP+ T++ +++
Sbjct: 260 LIDTFVKEGNLLEARNLYKEMI--RRSVVPNVFTYNSLIN 297
>sp|Q9LQ15|PPR95_ARATH Pentatricopeptide repeat-containing protein At1g62914,
mitochondrial OS=Arabidopsis thaliana GN=At1g62914 PE=2
SV=1
Length = 528
Score = 281 bits (719), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 172/524 (32%), Positives = 264/524 (50%), Gaps = 81/524 (15%)
Query: 2 ASRTQFRCLFSSETVSKVKLSSLFKSPRQIAAVSSPETQLNEFLHENCKSGI--INLNEA 59
A R R L + LS F R + +S + + E ++G+ I L++A
Sbjct: 9 AKRFVHRSLVVRGNAATFPLSFSFCRRRAFSGKTSYDYR------EVLRTGLSDIELDDA 62
Query: 60 RYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL------------------ 101
FG M +P P I F+ L A+AK +D VISF K+
Sbjct: 63 IGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINC 122
Query: 102 -----------------VSIGLLPDFLTLNILIN--CFGNKE------------------ 124
+ +G PD +TLN L+N C GN+
Sbjct: 123 FCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPD 182
Query: 125 --------RGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHK 176
GL + N+ EA L M+ G +PD++TYG ++NG C+ G+ +AL L
Sbjct: 183 TVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLN 242
Query: 177 KMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIH 236
KM + E N+ YS +IDSLCK D A LF EM+ +G+ P V+ ++LI
Sbjct: 243 KMEAAKIE------ANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLIS 296
Query: 237 GFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNP 296
C G W + + L +M++ PNL+TF+ +ID K GK+ +A L E MI+R ++P
Sbjct: 297 CLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDP 356
Query: 297 DRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLY 356
+ FTY+SL++G+C++ R+ A+++ M K C VV+YN LING+CK V++ M L+
Sbjct: 357 NIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELF 416
Query: 357 RQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKN 416
R++ G+ +TY TL+ G FQA AQ +F +M V P++ TYNIL+DGLCKN
Sbjct: 417 REMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKN 476
Query: 417 NCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWEL 460
+ +A+ +F L+ + E I +N +I+G+CKAG+ W++
Sbjct: 477 GKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGK----WKM 516
Score = 197 bits (502), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 123/449 (27%), Positives = 226/449 (50%), Gaps = 8/449 (1%)
Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
+ +A LF M P +I + L++ + + + +KM L N
Sbjct: 59 LDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKM------EILGISHN 112
Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
+++Y+I+I+ C+ + A L +M G P +V +L++GFC + L
Sbjct: 113 LYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVD 172
Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
+M+++G +P+ +TF +I L K +EA L++ M+QRG PD TY ++++G C G
Sbjct: 173 QMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRG 232
Query: 313 RIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYN 372
D A + M + + VV Y+ +I+ CK + ++A++L+ ++ + GVR VITY+
Sbjct: 233 DTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYS 292
Query: 373 TLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMN 432
+L+S L G+ A +L +M + P+L T++ LID K + +A KL+ +
Sbjct: 293 SLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKR 352
Query: 433 KFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKA 492
+ I ++ LI+G C RL A ++ + +K +P VVTY+ +I+G C+ +++K
Sbjct: 353 SIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKG 412
Query: 493 NDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVV 552
+ M + G N VT+ TL+HGF Q + +M + P+ T++I++
Sbjct: 413 MELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSV--GVHPNILTYNILL 470
Query: 553 DLLAKDEKYHECSAVSKSSYRACLYVTIF 581
D L K+ K + V + R+ + I+
Sbjct: 471 DGLCKNGKLAKAMVVFEYLQRSTMEPDIY 499
Score = 135 bits (341), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 88/311 (28%), Positives = 149/311 (47%), Gaps = 37/311 (11%)
Query: 278 KINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYN 337
++++A GL +M Q P ++ L+ + + D M G H + +YN
Sbjct: 58 ELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYN 117
Query: 338 ILINGYCK----------------------------ILN-------VEEAMSLYRQIISN 362
ILIN +C+ +LN + +A++L Q++
Sbjct: 118 ILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEM 177
Query: 363 GVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEA 422
G + +T+ TL+ GLF +A A L D M +PDL TY +++GLCK A
Sbjct: 178 GYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLA 237
Query: 423 VKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHG 482
+ L + +E K E + I++ +ID LCK D+A LF ++ KG+ P V+TYS +I
Sbjct: 238 LNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISC 297
Query: 483 LCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLV 542
LC G+ A+ L M + PN+VTF+ L+ F++ K K +L +M +R++
Sbjct: 298 LCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMI--KRSID 355
Query: 543 PDDTTFSIVVD 553
P+ T+S +++
Sbjct: 356 PNIFTYSSLIN 366
Score = 86.7 bits (213), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 114/215 (53%), Gaps = 10/215 (4%)
Query: 347 LNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTY 406
+ +++A+ L+ + + ++I ++ LLS + + + ++M++ + +L TY
Sbjct: 57 IELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTY 116
Query: 407 NILIDGLCKNNCVQEAVKLFHMLEMNK--FEFGIEIFNCLIDGLCKAGRLDNAWELFHKL 464
NILI+ C+ C + ++ L + +M K +E I N L++G C R+ +A L ++
Sbjct: 117 NILINCFCR--CSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQM 174
Query: 465 PQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKT 524
+ G P VT++ +IHGL K +A + M + GC P++VT+ +++G + T
Sbjct: 175 VEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDT 234
Query: 525 SKVVELLHKM--AEPERNLVPDDTTFSIVVDLLAK 557
+ LL+KM A+ E N+V +S V+D L K
Sbjct: 235 DLALNLLNKMEAAKIEANVV----IYSTVIDSLCK 265
>sp|Q9SZ20|PP339_ARATH Pentatricopeptide repeat-containing protein At4g26800
OS=Arabidopsis thaliana GN=At4g26800 PE=2 SV=2
Length = 514
Score = 259 bits (663), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 158/474 (33%), Positives = 257/474 (54%), Gaps = 22/474 (4%)
Query: 46 HENCKSGI--INLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVS 103
E +SG+ I ++A + F M + P P I FN + A+AK + YD VI+ ++++ +
Sbjct: 54 REVLRSGLHNIKFDDAFHLFVLMAYSYPLPSIVEFNKVLTAIAKMQMYDVVINLWKRIEN 113
Query: 104 ---IGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLIN 160
I + PD T NIL+NCF C + A M+ G+ PD++T +L+N
Sbjct: 114 AEGIEISPDLYTCNILVNCF-------CRCFQPSSALSYLGKMMKLGIEPDIVTASSLVN 166
Query: 161 GFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMK 220
GFC + ++ A+ V+G E I K ++ +I+ID+LCK LV A E+ MK
Sbjct: 167 GFCLSNSIKDAV-----YVAGQMEKMGI-KRDVVVDTILIDTLCKNRLVVPALEVLKRMK 220
Query: 221 GRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKIN 280
RGI+P VV ++LI G C +G + EM PN++TF+ +ID K GK++
Sbjct: 221 DRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLS 280
Query: 281 EANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILI 340
+ + + ++MIQ ++P+ FTY+SL+ G C+ R+D A ++ M SKGC VV+Y+ L
Sbjct: 281 KVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLA 340
Query: 341 NGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVE 400
NG+ K V++ + L + GV ++ NTL+ G FQAG+ A +F M +
Sbjct: 341 NGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLI 400
Query: 401 PDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWEL 460
P++ +YNI++ GL N V++A+ F ++ + + I + +I G+CKA + A++L
Sbjct: 401 PNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIHGMCKACMVKEAYDL 460
Query: 461 FHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEK----NGCAPNVVT 510
F+KL K + P Y+IMI L R G +A+ + +K N AP V+
Sbjct: 461 FYKLKFKRVEPDFKAYTIMIAELNRAGMRTEADALNRFYQKHVRQNESAPAEVS 514
Score = 165 bits (417), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 102/420 (24%), Positives = 212/420 (50%), Gaps = 5/420 (1%)
Query: 150 PDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLV 209
P ++ + ++ + V + L K++ + + G+ ++++ +I+++ C+
Sbjct: 83 PSIVEFNKVLTAIAKMQMYDVVINLWKRIENAE---GIEISPDLYTCNILVNCFCRCFQP 139
Query: 210 DKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVM 269
A +M GI P +V ++L++GFC + + ++ + +M +G + +++ ++
Sbjct: 140 SSALSYLGKMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTIL 199
Query: 270 IDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGC 329
ID LCK + A +L+ M RG++P+ TY+SL+ G C GR+ A M SK
Sbjct: 200 IDTLCKNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKI 259
Query: 330 KHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQK 389
V++++ LI+ Y K + + S+Y+ +I + V TY++L+ GL + A K
Sbjct: 260 NPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIK 319
Query: 390 LFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLC 449
+ D M P++ TY+ L +G K++ V + +KL + N LI G
Sbjct: 320 MLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYF 379
Query: 450 KAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVV 509
+AG++D A +F + GL+P + +Y+I++ GL G++EKA +M+K +++
Sbjct: 380 QAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDII 439
Query: 510 TFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSK 569
T+ ++HG + + +L +K+ + + PD ++I++ L + E A+++
Sbjct: 440 TYTIMIHGMCKACMVKEAYDLFYKL--KFKRVEPDFKAYTIMIAELNRAGMRTEADALNR 497
Score = 79.7 bits (195), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 126/260 (48%), Gaps = 9/260 (3%)
Query: 332 TVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLF 391
T + Y ++ + ++A L+ + + +++ +N +L+ + + L+
Sbjct: 49 TTIDYREVLRSGLHNIKFDDAFHLFVLMAYSYPLPSIVEFNKVLTAIAKMQMYDVVINLW 108
Query: 392 DEMKL---YNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKF--EFGIEIFNCLID 446
++ + PDL T NIL++ C+ C Q + L ++ +M K E I + L++
Sbjct: 109 KRIENAEGIEISPDLYTCNILVNCFCR--CFQPSSALSYLGKMMKLGIEPDIVTASSLVN 166
Query: 447 GLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAP 506
G C + + +A + ++ + G+ VV +I+I LC+ + A + L M+ G +P
Sbjct: 167 GFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPALEVLKRMKDRGISP 226
Query: 507 NVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSA 566
NVVT+++L+ G ++ + + LH+M + N P+ TFS ++D AK K + +
Sbjct: 227 NVVTYSSLITGLCKSGRLADAERRLHEMDSKKIN--PNVITFSALIDAYAKRGKLSKVDS 284
Query: 567 VSKSSYRACLYVTIFQPSSL 586
V K + + +F SSL
Sbjct: 285 VYKMMIQMSIDPNVFTYSSL 304
>sp|Q9LFF1|PP281_ARATH Pentatricopeptide repeat-containing protein At3g53700,
chloroplastic OS=Arabidopsis thaliana GN=MEE40 PE=2 SV=1
Length = 754
Score = 254 bits (649), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 142/479 (29%), Positives = 250/479 (52%), Gaps = 13/479 (2%)
Query: 73 PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
P +S+FN+L A+ + I + S GL+PD T ++ +G E
Sbjct: 187 PDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVM-------QGYIEEGD 239
Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
+ A + + M+ FG ++ +++GFC+ G + AL ++M + D G +
Sbjct: 240 LDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQD---GFFP--D 294
Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
++++ +++ LCK G V A E+ M G +P V ++I G C G +E +
Sbjct: 295 QYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLD 354
Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
+M+ PN +T+N +I LCK ++ EA L ++ +G+ PD T+NSL+ G CL
Sbjct: 355 QMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTR 414
Query: 313 RIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYN 372
A E+F M SKGC+ +YN+LI+ C ++EA+++ +Q+ +G ++VITYN
Sbjct: 415 NHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYN 474
Query: 373 TLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMN 432
TL+ G +A + A+++FDEM+++ V + TYN LIDGLCK+ V++A +L + M
Sbjct: 475 TLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIME 534
Query: 433 KFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKA 492
+ +N L+ C+ G + A ++ + G P +VTY +I GLC+ G++E A
Sbjct: 535 GQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVA 594
Query: 493 NDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIV 551
+ L ++ G +N ++ G + KT++ + L +M E + PD ++ IV
Sbjct: 595 SKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLE-QNEAPPDAVSYRIV 652
Score = 240 bits (613), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 150/466 (32%), Positives = 227/466 (48%), Gaps = 16/466 (3%)
Query: 77 SFNLLFGAVAKNRHYDAVISFYRKLVSI-GLLPDFLTLNILINCFGNKERGLCVENRIKE 135
S N++ K + ++F +++ + G PD T N L+N GLC +K
Sbjct: 261 SVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVN-------GLCKAGHVKH 313
Query: 136 ATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFS 195
A + M+ G PDV TY ++I+G C+ G + A+ + +M++ D N +
Sbjct: 314 AIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRD------CSPNTVT 367
Query: 196 YSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEML 255
Y+ +I +LCKE V++A EL + +GI P V +LI G C N LF EM
Sbjct: 368 YNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMR 427
Query: 256 DLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRID 315
G P+ T+N++ID LC GK++EA +L+ M G TYN+L+DG+C +
Sbjct: 428 SKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTR 487
Query: 316 TAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLL 375
A EIF M G V+YN LI+G CK VE+A L Q+I G + TYN+LL
Sbjct: 488 EAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLL 547
Query: 376 SGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFE 435
+ + G A + M EPD+ TY LI GLCK V+ A KL ++M
Sbjct: 548 THFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGIN 607
Query: 436 FGIEIFNCLIDGLCKAGRLDNAWELFHK-LPQKGLVPTVVTYSIMIHGLCR-KGKLEKAN 493
+N +I GL + + A LF + L Q P V+Y I+ GLC G + +A
Sbjct: 608 LTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAV 667
Query: 494 DFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPER 539
DFL+ + + G P + L G L + +V+L++ + + R
Sbjct: 668 DFLVELLEKGFVPEFSSLYMLAEGLLTLSMEETLVKLVNMVMQKAR 713
Score = 237 bits (605), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 165/564 (29%), Positives = 267/564 (47%), Gaps = 31/564 (5%)
Query: 21 LSSLFKSPRQIAAVS-----------SPETQL-NEFLHENCKSGIINLNEARYFFGYMTH 68
L SL P AA+ SPE L E L +SG + ++ + M
Sbjct: 54 LDSLRSQPDDSAALRLFNLASKKPNFSPEPALYEEILLRLGRSG--SFDDMKKILEDMKS 111
Query: 69 MQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVS-IGLLPDFLTLNILINCFGNKERGL 127
+ S+F +L + A+ D ++S ++ GL PD N ++N L
Sbjct: 112 SRCEMGTSTFLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNL-------L 164
Query: 128 CVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGL 187
N +K M +G++PDV T+ LI CR L A+ + + M S GL
Sbjct: 165 VDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPS----YGL 220
Query: 188 ISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEV 247
+ F + ++ +EG +D A + +M G + + V ++HGFC G E+
Sbjct: 221 VPDEKTF--TTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDA 278
Query: 248 NGLFIEMLDL-GPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMD 306
EM + G P+ TFN +++ LCK G + A ++++M+Q G +PD +TYNS++
Sbjct: 279 LNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVIS 338
Query: 307 GYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQ 366
G C +G + A E+ M ++ C V+YN LI+ CK VEEA L R + S G+
Sbjct: 339 GLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILP 398
Query: 367 TVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLF 426
V T+N+L+ GL A +LF+EM+ EPD TYN+LID LC + EA+ +
Sbjct: 399 DVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNML 458
Query: 427 HMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRK 486
+E++ + +N LIDG CKA + A E+F ++ G+ VTY+ +I GLC+
Sbjct: 459 KQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKS 518
Query: 487 GKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDT 546
++E A + M G P+ T+N+L+ F + K +++ M PD
Sbjct: 519 RRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMT--SNGCEPDIV 576
Query: 547 TFSIVVDLLAKDEKYHECSAVSKS 570
T+ ++ L K + S + +S
Sbjct: 577 TYGTLISGLCKAGRVEVASKLLRS 600
Score = 175 bits (444), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 123/414 (29%), Positives = 198/414 (47%), Gaps = 25/414 (6%)
Query: 49 CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
CK G + EA M SP ++N L + K + R L S G+LP
Sbjct: 341 CKLG--EVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILP 398
Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
D T N LI +GLC+ + A LF+ M + G PD TY LI+ C G L
Sbjct: 399 DVCTFNSLI-------QGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKL 451
Query: 169 SVALRLHKKM-VSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPA 227
AL + K+M +SG ++ +Y+ +ID CK +A+E+F EM+ G++
Sbjct: 452 DEALNMLKQMELSG-------CARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRN 504
Query: 228 VVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLE 287
V TLI G C + E+ L +M+ G +P+ T+N ++ C+GG I +A +++
Sbjct: 505 SVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQ 564
Query: 288 LMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKIL 347
M G PD TY +L+ G C GR++ A ++ S+ KG T +YN +I G +
Sbjct: 565 AMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKR 624
Query: 348 NVEEAMSLYRQII-SNGVRQTVITYNTLLSGLFQAGQAGYAQKLFD---EMKLYNVEPDL 403
EA++L+R+++ N ++Y + GL G G ++ D E+ P+
Sbjct: 625 KTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGG--GPIREAVDFLVELLEKGFVPEF 682
Query: 404 STYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNA 457
S+ +L +GL + + VKL +M+ M K F E + ++ GL K + +A
Sbjct: 683 SSLYMLAEGLLTLSMEETLVKLVNMV-MQKARFSEEEVS-MVKGLLKIRKFQDA 734
>sp|Q9CA58|PP120_ARATH Putative pentatricopeptide repeat-containing protein At1g74580
OS=Arabidopsis thaliana GN=At1g74580 PE=3 SV=1
Length = 763
Score = 248 bits (633), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 161/514 (31%), Positives = 254/514 (49%), Gaps = 18/514 (3%)
Query: 32 AAVSSPETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHY 91
+ VS + N+ L CK G ++ E + P + ++NL + +
Sbjct: 210 SGVSLCLSTFNKLLRVLCKKG--DVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGEL 267
Query: 92 DAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPD 151
D + L+ G PD +T N LI GLC ++ +EA M+ G+ PD
Sbjct: 268 DGAVRMVGCLIEQGPKPDVITYNNLI-------YGLCKNSKFQEAEVYLGKMVNEGLEPD 320
Query: 152 VITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDK 211
TY TLI G+C+ G + +A R+ V NG + + F+Y +ID LC EG ++
Sbjct: 321 SYTYNTLIAGYCKGGMVQLAERI----VGDAVFNGFVP--DQFTYRSLIDGLCHEGETNR 374
Query: 212 AKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMID 271
A LF E G+GI P V++ TLI G G E L EM + G P + TFN++++
Sbjct: 375 ALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVN 434
Query: 272 CLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKH 331
LCK G +++A+GL+++MI +G PD FT+N L+ GY +++ A EI M G
Sbjct: 435 GLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDP 494
Query: 332 TVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLF 391
V +YN L+NG CK E+ M Y+ ++ G + T+N LL L + + A L
Sbjct: 495 DVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLL 554
Query: 392 DEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFH-MLEMNKFEFGIEIFNCLIDGLCK 450
+EMK +V PD T+ LIDG CKN + A LF M E K +N +I +
Sbjct: 555 EEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTE 614
Query: 451 AGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVT 510
+ A +LF ++ + L P TY +M+ G C+ G + FLL M +NG P++ T
Sbjct: 615 KLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTT 674
Query: 511 FNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPD 544
+++ ++ + ++H+M ++ LVP+
Sbjct: 675 LGRVINCLCVEDRVYEAAGIIHRMV--QKGLVPE 706
Score = 231 bits (588), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 146/503 (29%), Positives = 241/503 (47%), Gaps = 15/503 (2%)
Query: 56 LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNI 115
+ EA F M P + S+N + + + ++D Y ++ G+ PD + I
Sbjct: 92 VQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTI 151
Query: 116 LINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLH 175
+ F C +R A L NM + G +V+ Y T++ GF + L
Sbjct: 152 RMKSF-------CKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELF 204
Query: 176 KKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLI 235
KM++ L + ++ ++ LCK+G V + ++L ++ RG+ P + I
Sbjct: 205 GKMLASGVSLCLST------FNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFI 258
Query: 236 HGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLN 295
G C G + + +++ GP+P+++T+N +I LCK K EA L M+ GL
Sbjct: 259 QGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLE 318
Query: 296 PDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSL 355
PD +TYN+L+ GYC G + A I G +Y LI+G C A++L
Sbjct: 319 PDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALAL 378
Query: 356 YRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCK 415
+ + + G++ VI YNTL+ GL G A +L +EM + P++ T+NIL++GLCK
Sbjct: 379 FNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCK 438
Query: 416 NNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVT 475
CV +A L ++ + I FN LI G +++NA E+ + G+ P V T
Sbjct: 439 MGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYT 498
Query: 476 YSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMA 535
Y+ +++GLC+ K E + M + GCAPN+ TFN L+ + K + + LL +M
Sbjct: 499 YNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMK 558
Query: 536 EPERNLVPDDTTFSIVVDLLAKD 558
N PD TF ++D K+
Sbjct: 559 NKSVN--PDAVTFGTLIDGFCKN 579
Score = 135 bits (340), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 104/406 (25%), Positives = 186/406 (45%), Gaps = 42/406 (10%)
Query: 190 KTNIFSYSIIIDSLCKEGLVDKAKELFLEMK---GRGINPAVVVCTTLIHGFCCAGNWEE 246
K + +Y +I+ L G + +E+ ++M+ G + V V +G G +E
Sbjct: 37 KHTLSTYRSVIEKLGYYGKFEAMEEVLVDMRENVGNHMLEGVYVGAMKNYGR--KGKVQE 94
Query: 247 VNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMD 306
+F M P + ++N ++ L G ++A+ + M RG+ PD +++ M
Sbjct: 95 AVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMK 154
Query: 307 GYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQ 366
+C R A + +M S+GC+ VV+Y ++ G+ + E L+ +++++GV
Sbjct: 155 SFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSL 214
Query: 367 TVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKL- 425
+ T+N LL L + G +KL D++ V P+L TYN+ I GLC+ + AV++
Sbjct: 215 CLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMV 274
Query: 426 -------------------FHMLEMNKFE-----------FGIE----IFNCLIDGLCKA 451
+ + + +KF+ G+E +N LI G CK
Sbjct: 275 GCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKG 334
Query: 452 GRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTF 511
G + A + G VP TY +I GLC +G+ +A G PNV+ +
Sbjct: 335 GMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILY 394
Query: 512 NTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAK 557
NTL+ G + +L ++M+ E+ L+P+ TF+I+V+ L K
Sbjct: 395 NTLIKGLSNQGMILEAAQLANEMS--EKGLIPEVQTFNILVNGLCK 438
Score = 125 bits (313), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 136/273 (49%), Gaps = 21/273 (7%)
Query: 72 SPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVEN 131
P + ++N L + K ++ V+ Y+ +V G P+ T NIL+ LC
Sbjct: 493 DPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILL-------ESLCRYR 545
Query: 132 RIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKT 191
++ EA L + M V PD +T+GTLI+GFC+ G+L A L +KM E +
Sbjct: 546 KLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKM-----EEAYKVSS 600
Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
+ +Y+III + ++ V A++LF EM R + P ++ GFC GN
Sbjct: 601 STPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFL 660
Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
+EM++ G P+L T +I+CLC ++ EA G++ M+Q+GL P+ ++ C V
Sbjct: 661 LEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEA------VNTICDV 714
Query: 312 GRIDTA--REIFLSMHSKGCKHTVVSYNILING 342
+ + A + + + K C T +Y +L +G
Sbjct: 715 DKKEVAAPKLVLEDLLKKSC-ITYYAYELLFDG 746
>sp|P0C894|PP143_ARATH Putative pentatricopeptide repeat-containing protein At2g02150
OS=Arabidopsis thaliana GN=At2g02150 PE=3 SV=1
Length = 761
Score = 245 bits (626), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 152/503 (30%), Positives = 257/503 (51%), Gaps = 23/503 (4%)
Query: 37 PETQ-LNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVI 95
P+T+ N LH K G ++ + FF M P + ++N++ + K +A
Sbjct: 225 PKTRSCNGLLHRFAKLG--KTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAAR 282
Query: 96 SFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITY 155
+ ++ GL+PD +T N +I+ FG R+ + F+ M PDVITY
Sbjct: 283 GLFEEMKFRGLVPDTVTYNSMIDGFGKV-------GRLDDTVCFFEEMKDMCCEPDVITY 335
Query: 156 GTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKEL 215
LIN FC+ G L + L +++M NGL K N+ SYS ++D+ CKEG++ +A +
Sbjct: 336 NALINCFCKFGKLPIGLEFYREMKG----NGL--KPNVVSYSTLVDAFCKEGMMQQAIKF 389
Query: 216 FLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCK 275
+++M+ G+ P T+LI C GN + L EML +G N++T+ +ID LC
Sbjct: 390 YVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCD 449
Query: 276 GGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVS 335
++ EA L M G+ P+ +YN+L+ G+ +D A E+ + +G K ++
Sbjct: 450 AERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLL 509
Query: 336 YNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMK 395
Y I G C + +E A + ++ G++ + Y TL+ F++G L DEMK
Sbjct: 510 YGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMK 569
Query: 396 LYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIE----IFNCLIDGLCKA 451
++E + T+ +LIDGLCKN V +AV F+ + +FG++ IF +IDGLCK
Sbjct: 570 ELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISN---DFGLQANAAIFTAMIDGLCKD 626
Query: 452 GRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTF 511
+++ A LF ++ QKGLVP Y+ ++ G ++G + +A M + G +++ +
Sbjct: 627 NQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAY 686
Query: 512 NTLMHGFLQNNKTSKVVELLHKM 534
+L+ G N+ K L +M
Sbjct: 687 TSLVWGLSHCNQLQKARSFLEEM 709
Score = 212 bits (540), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 111/341 (32%), Positives = 187/341 (54%), Gaps = 4/341 (1%)
Query: 196 YSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEML 255
+S++ID G++++A + F +MK + P C L+H F G ++V F +M+
Sbjct: 199 FSVLIDL----GMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMI 254
Query: 256 DLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRID 315
G RP + T+N+MIDC+CK G + A GL E M RGL PD TYNS++DG+ VGR+D
Sbjct: 255 GAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLD 314
Query: 316 TAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLL 375
F M C+ V++YN LIN +CK + + YR++ NG++ V++Y+TL+
Sbjct: 315 DTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLV 374
Query: 376 SGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFE 435
+ G A K + +M+ + P+ TY LID CK + +A +L + + E
Sbjct: 375 DAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVE 434
Query: 436 FGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDF 495
+ + + LIDGLC A R+ A ELF K+ G++P + +Y+ +IHG + +++A +
Sbjct: 435 WNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALEL 494
Query: 496 LLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAE 536
L ++ G P+++ + T + G K ++++M E
Sbjct: 495 LNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKE 535
Score = 200 bits (509), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 132/457 (28%), Positives = 221/457 (48%), Gaps = 44/457 (9%)
Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
++EA F M F V P + L++ F + G R K M+ G ++
Sbjct: 208 LEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMI------GAGARPT 261
Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
+F+Y+I+ID +CKEG V+ A+ LF EMK RG+ P V ++I GF G ++ F
Sbjct: 262 VFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFE 321
Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
EM D+ P+++T+N +I+C CK GK+ M GL P+ +Y++L+D +C G
Sbjct: 322 EMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEG 381
Query: 313 RIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYN 372
+ A + ++ M G +Y LI+ CKI N+ +A L +++ GV V+TY
Sbjct: 382 MMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYT 441
Query: 373 TLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLE-- 430
L+ GL A + A++LF +M V P+L++YN LI G K + A++L + L+
Sbjct: 442 ALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGR 501
Query: 431 ----------------------------MNKF-EFGIE----IFNCLIDGLCKAGRLDNA 457
MN+ E GI+ I+ L+D K+G
Sbjct: 502 GIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEG 561
Query: 458 WELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKN-GCAPNVVTFNTLMH 516
L ++ + + TVVT+ ++I GLC+ + KA D+ + + G N F ++
Sbjct: 562 LHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMID 621
Query: 517 GFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
G ++N+ L +M ++ LVPD T ++ ++D
Sbjct: 622 GLCKDNQVEAATTLFEQMV--QKGLVPDRTAYTSLMD 656
Score = 134 bits (336), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 92/350 (26%), Positives = 157/350 (44%), Gaps = 38/350 (10%)
Query: 261 PNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREI 320
P F+ + L G + EA M + + P + N L+ + +G+ D +
Sbjct: 190 PGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRF 249
Query: 321 FLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQ 380
F M G + TV +YNI+I+ CK +VE A L+ ++ G+ +TYN+++ G +
Sbjct: 250 FKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGK 309
Query: 381 AGQAGYAQKLFDEMKLYNVEPDLSTYNILI------------------------------ 410
G+ F+EMK EPD+ TYN LI
Sbjct: 310 VGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVS 369
Query: 411 -----DGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLP 465
D CK +Q+A+K + + + LID CK G L +A+ L +++
Sbjct: 370 YSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEML 429
Query: 466 QKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTS 525
Q G+ VVTY+ +I GLC ++++A + M+ G PN+ ++N L+HGF++
Sbjct: 430 QVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMD 489
Query: 526 KVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKSSYRAC 575
+ +ELL+++ R + PD + + L EK E + V + + C
Sbjct: 490 RALELLNEL--KGRGIKPDLLLYGTFIWGLCSLEKI-EAAKVVMNEMKEC 536
Score = 129 bits (323), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 109/435 (25%), Positives = 186/435 (42%), Gaps = 72/435 (16%)
Query: 56 LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNI 115
L++ FF M M P + ++N L K + FYR++ GL P+ ++ +
Sbjct: 313 LDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYST 372
Query: 116 LINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLH 175
L++ F C E +++A + +M G+ P+ TY +LI+ C+ GNLS A RL
Sbjct: 373 LVDAF-------CKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLG 425
Query: 176 KKMVSGDYENGLISKT-----------------------------NIFSYSIIIDSLCKE 206
+M+ E +++ T N+ SY+ +I K
Sbjct: 426 NEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKA 485
Query: 207 GLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCC-------------------------- 240
+D+A EL E+KGRGI P +++ T I G C
Sbjct: 486 KNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIY 545
Query: 241 ---------AGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQ 291
+GN E L EM +L ++TF V+ID LCK +++A +
Sbjct: 546 TTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISN 605
Query: 292 R-GLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVE 350
GL + + +++DG C +++ A +F M KG +Y L++G K NV
Sbjct: 606 DFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVL 665
Query: 351 EAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILI 410
EA++L ++ G++ ++ Y +L+ GL Q A+ +EM + PD ++
Sbjct: 666 EALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVL 725
Query: 411 DGLCKNNCVQEAVKL 425
+ C+ EAV+L
Sbjct: 726 KKHYELGCIDEAVEL 740
>sp|Q3EDF8|PPR28_ARATH Pentatricopeptide repeat-containing protein At1g09900
OS=Arabidopsis thaliana GN=At1g09900 PE=2 SV=1
Length = 598
Score = 243 bits (621), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 132/424 (31%), Positives = 224/424 (52%), Gaps = 16/424 (3%)
Query: 73 PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENR 132
P + ++N++ K + +S ++ + PD +T N ++ R LC +
Sbjct: 170 PDVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTIL-------RSLCDSGK 219
Query: 133 IKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
+K+A + M+ PDVITY LI CR + A++L +M + G +
Sbjct: 220 LKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEM----RDRGCTP--D 273
Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
+ +Y+++++ +CKEG +D+A + +M G P V+ ++ C G W + L
Sbjct: 274 VVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLA 333
Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
+ML G P+++TFN++I+ LC+ G + A +LE M Q G P+ +YN L+ G+C
Sbjct: 334 DMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEK 393
Query: 313 RIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYN 372
++D A E M S+GC +V+YN ++ CK VE+A+ + Q+ S G +ITYN
Sbjct: 394 KMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYN 453
Query: 373 TLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMN 432
T++ GL +AG+ G A KL DEM+ +++PD TY+ L+ GL + V EA+K FH E
Sbjct: 454 TVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERM 513
Query: 433 KFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKA 492
FN ++ GLCK+ + D A + + +G P +Y+I+I GL +G ++A
Sbjct: 514 GIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEA 573
Query: 493 NDFL 496
+ L
Sbjct: 574 LELL 577
Score = 242 bits (618), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 140/500 (28%), Positives = 253/500 (50%), Gaps = 24/500 (4%)
Query: 38 ETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSP---PISSFNLLFGAVAKNRHYDAV 94
+ + N L + ++G L E F M + P P ++ F + K R +
Sbjct: 102 DVESNNHLRQMVRTG--ELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKI 159
Query: 95 ISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVIT 154
+ L G +PD +T N++I+ G C I A + M V PDV+T
Sbjct: 160 LEI---LEGSGAVPDVITYNVMIS-------GYCKAGEINNALSVLDRM---SVSPDVVT 206
Query: 155 YGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKE 214
Y T++ C +G L A+ + +M+ D ++ +Y+I+I++ C++ V A +
Sbjct: 207 YNTILRSLCDSGKLKQAMEVLDRMLQRD------CYPDVITYTILIEATCRDSGVGHAMK 260
Query: 215 LFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLC 274
L EM+ RG P VV L++G C G +E +M G +PN++T N+++ +C
Sbjct: 261 LLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMC 320
Query: 275 KGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVV 334
G+ +A LL M+++G +P T+N L++ C G + A +I M GC+ +
Sbjct: 321 STGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSL 380
Query: 335 SYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEM 394
SYN L++G+CK ++ A+ +++S G ++TYNT+L+ L + G+ A ++ +++
Sbjct: 381 SYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQL 440
Query: 395 KLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRL 454
P L TYN +IDGL K +A+KL + + ++ L+ GL + G++
Sbjct: 441 SSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKV 500
Query: 455 DNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTL 514
D A + FH+ + G+ P VT++ ++ GLC+ + ++A DFL++M GC PN ++ L
Sbjct: 501 DEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTIL 560
Query: 515 MHGFLQNNKTSKVVELLHKM 534
+ G + +ELL+++
Sbjct: 561 IEGLAYEGMAKEALELLNEL 580
Score = 216 bits (549), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 121/400 (30%), Positives = 211/400 (52%), Gaps = 11/400 (2%)
Query: 164 RTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRG 223
RTG L + + MV Y + +I + +I C+ G KA ++ ++G G
Sbjct: 114 RTGELEEGFKFLENMV---YHGNV---PDIIPCTTLIRGFCRLGKTRKAAKILEILEGSG 167
Query: 224 INPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEAN 283
P V+ +I G+C AG E+N + + P+++T+N ++ LC GK+ +A
Sbjct: 168 AVPDVITYNVMISGYCKAG---EINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAM 224
Query: 284 GLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGY 343
+L+ M+QR PD TY L++ C + A ++ M +GC VV+YN+L+NG
Sbjct: 225 EVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGI 284
Query: 344 CKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDL 403
CK ++EA+ + S+G + VIT+N +L + G+ A+KL +M P +
Sbjct: 285 CKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSV 344
Query: 404 STYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHK 463
T+NILI+ LC+ + A+ + + + + +N L+ G CK ++D A E +
Sbjct: 345 VTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLER 404
Query: 464 LPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNK 523
+ +G P +VTY+ M+ LC+ GK+E A + L + GC+P ++T+NT++ G + K
Sbjct: 405 MVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGK 464
Query: 524 TSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
T K ++LL +M ++L PD T+S +V L+++ K E
Sbjct: 465 TGKAIKLLDEMRA--KDLKPDTITYSSLVGGLSREGKVDE 502
Score = 132 bits (332), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 85/322 (26%), Positives = 152/322 (47%), Gaps = 36/322 (11%)
Query: 72 SPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVEN 131
+P + ++N+L + K D I F + S G P+ +T NI++ R +C
Sbjct: 271 TPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIIL-------RSMCSTG 323
Query: 132 RIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSG---------- 181
R +A L +M+ G P V+T+ LIN CR G L A+ + +KM
Sbjct: 324 RWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYN 383
Query: 182 ----------------DYENGLISK---TNIFSYSIIIDSLCKEGLVDKAKELFLEMKGR 222
+Y ++S+ +I +Y+ ++ +LCK+G V+ A E+ ++ +
Sbjct: 384 PLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSK 443
Query: 223 GINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEA 282
G +P ++ T+I G AG + L EM +P+ +T++ ++ L + GK++EA
Sbjct: 444 GCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEA 503
Query: 283 NGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILING 342
+ G+ P+ T+NS+M G C + D A + + M ++GCK SY ILI G
Sbjct: 504 IKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEG 563
Query: 343 YCKILNVEEAMSLYRQIISNGV 364
+EA+ L ++ + G+
Sbjct: 564 LAYEGMAKEALELLNELCNKGL 585
>sp|Q9SUD8|PP340_ARATH Pentatricopeptide repeat-containing protein At4g28010
OS=Arabidopsis thaliana GN=At4g28010 PE=2 SV=1
Length = 704
Score = 243 bits (620), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 179/589 (30%), Positives = 274/589 (46%), Gaps = 49/589 (8%)
Query: 31 IAAVSSPETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRH 90
+ A S ET+L C+ L A F S + NL+ + ++R+
Sbjct: 33 VNAFSETETKLRSL----CEDSNPQLKNAVSVFQQAVDSGSSLAFAGNNLM-AKLVRSRN 87
Query: 91 YDAVISFYRKLVSIGLLPDFLTLNILINCFGNKER------------------------- 125
++ SFYRK++ +F++L+ L+ C+ +
Sbjct: 88 HELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNI 147
Query: 126 ---GLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGD 182
GLC +A L + M + PDV +Y T+I GFC L AL L +M
Sbjct: 148 LLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEM---- 203
Query: 183 YENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAG 242
G ++ ++ I+ID+ CK G +D+A EMK G+ +VV T+LI GFC G
Sbjct: 204 --KGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCG 261
Query: 243 NWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYN 302
+ LF E+L+ G P +T+N +I CK G++ EA+ + E MI+RG+ P+ +TY
Sbjct: 262 ELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYT 321
Query: 303 SLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISN 362
L+DG C VG+ A ++ M K + V+YNI+IN CK V +A+ + +
Sbjct: 322 GLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKR 381
Query: 363 GVRQTVITYNTLLSGLFQAGQAGYAQKLFDEM--KLYNVEPDLSTYNILIDGLCKNNCVQ 420
R ITYN LL GL G A KL M +PD+ +YN LI GLCK N +
Sbjct: 382 RTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLH 441
Query: 421 EAVKLFHMLEMNKFEFGIEI-FNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIM 479
+A+ ++ +L + K G + N L++ KAG ++ A EL+ ++ +V TY+ M
Sbjct: 442 QALDIYDLL-VEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAM 500
Query: 480 IHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPER 539
I G C+ G L A L M + P+V +N L+ + + L +M
Sbjct: 501 IDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRD-- 558
Query: 540 NLVPDDTTFSIVVD--LLAKDEKYHECSAVSKSSYRACLYVTIFQPSSL 586
N PD +F+I++D L A D K E V S RA L +F S L
Sbjct: 559 NNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMS--RAGLSPDLFTYSKL 605
Score = 227 bits (579), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 142/518 (27%), Positives = 246/518 (47%), Gaps = 41/518 (7%)
Query: 54 INLNEARYFFGYMTHMQP---SPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDF 110
+ + + + FG + M + + + N+L + +N +S R++ L+PD
Sbjct: 118 VQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDV 177
Query: 111 LTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSV 170
+ N +I RG C +++A L M G ++T+G LI+ FC+ G +
Sbjct: 178 FSYNTVI-------RGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDE 230
Query: 171 ALRLHKKMVSGDYENGLISKTNIF-----------------------------SYSIIID 201
A+ K+M E L+ T++ +Y+ +I
Sbjct: 231 AMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIR 290
Query: 202 SLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRP 261
CK G + +A E+F M RG+ P V T LI G C G +E L M++ P
Sbjct: 291 GFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEP 350
Query: 262 NLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIF 321
N +T+N++I+ LCK G + +A ++ELM +R PD TYN L+ G C G +D A ++
Sbjct: 351 NAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLL 410
Query: 322 LSM--HSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLF 379
M S V+SYN LI+G CK + +A+ +Y ++ +T N LL+
Sbjct: 411 YLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTL 470
Query: 380 QAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIE 439
+AG A +L+ ++ + + TY +IDG CK + A L + +++ + +
Sbjct: 471 KAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVF 530
Query: 440 IFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYM 499
+NCL+ LCK G LD AW LF ++ + P VV+++IMI G + G ++ A L+ M
Sbjct: 531 DYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGM 590
Query: 500 EKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEP 537
+ G +P++ T++ L++ FL+ + + KM +
Sbjct: 591 SRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDS 628
Score = 119 bits (297), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 88/375 (23%), Positives = 167/375 (44%), Gaps = 15/375 (4%)
Query: 52 GIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFL 111
G+ EA M P ++N++ + K+ + + PD +
Sbjct: 329 GVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNI 388
Query: 112 TLNILINCFGNKERGLCVENRIKEATWLFKNMIAFG--VRPDVITYGTLINGFCRTGNLS 169
T NIL+ GLC + + EA+ L M+ PDVI+Y LI+G C+ L
Sbjct: 389 TYNILLG-------GLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLH 441
Query: 170 VALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVV 229
AL ++ +V + + + +I+++S K G V+KA EL+ ++ I
Sbjct: 442 QALDIYDLLVEK------LGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSD 495
Query: 230 VCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELM 289
T +I GFC G GL +M +P++ +N ++ LCK G +++A L E M
Sbjct: 496 TYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEM 555
Query: 290 IQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNV 349
+ PD ++N ++DG G I +A + + M G + +Y+ LIN + K+ +
Sbjct: 556 QRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYL 615
Query: 350 EEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNIL 409
+EA+S + +++ +G +++L G+ +L ++ ++ D +
Sbjct: 616 DEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVDKDIVLDKELTCTV 675
Query: 410 IDGLCKNNCVQEAVK 424
+D +C ++ + K
Sbjct: 676 MDYMCNSSANMDLAK 690
>sp|Q9SZ52|PP344_ARATH Pentatricopeptide repeat-containing protein At4g31850,
chloroplastic OS=Arabidopsis thaliana GN=PGR3 PE=1 SV=1
Length = 1112
Score = 236 bits (602), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 149/487 (30%), Positives = 255/487 (52%), Gaps = 15/487 (3%)
Query: 77 SFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEA 136
S+N L + K+R + YR+++ G P T + L+ G + I
Sbjct: 190 SYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRD-------IDSV 242
Query: 137 TWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSY 196
L K M G++P+V T+ I R G ++ A + K+M D E ++ +Y
Sbjct: 243 MGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRM---DDEG---CGPDVVTY 296
Query: 197 SIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLD 256
+++ID+LC +D AKE+F +MK P V TL+ F + + V + EM
Sbjct: 297 TVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEK 356
Query: 257 LGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDT 316
G P+++TF +++D LCK G EA L++M +G+ P+ TYN+L+ G V R+D
Sbjct: 357 DGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDD 416
Query: 317 AREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLS 376
A E+F +M S G K T +Y + I+ Y K + A+ + ++ + G+ ++ N L
Sbjct: 417 ALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLY 476
Query: 377 GLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEF 436
L +AG+ A+++F +K + PD TYN+++ K + EA+KL + N E
Sbjct: 477 SLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEP 536
Query: 437 GIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFL 496
+ + N LI+ L KA R+D AW++F ++ + L PTVVTY+ ++ GL + GK+++A +
Sbjct: 537 DVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELF 596
Query: 497 LYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLA 556
M + GC PN +TFNTL +N++ + +++L KM + VPD T++ ++ L
Sbjct: 597 EGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMM--DMGCVPDVFTYNTIIFGLV 654
Query: 557 KDEKYHE 563
K+ + E
Sbjct: 655 KNGQVKE 661
Score = 197 bits (500), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 164/601 (27%), Positives = 261/601 (43%), Gaps = 94/601 (15%)
Query: 56 LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNI 115
L+ A+ F M + P ++ L + NR D+V F+ ++ G +PD +T I
Sbjct: 309 LDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTI 368
Query: 116 LINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLH 175
L++ LC EA M G+ P++ TY TLI G R L AL L
Sbjct: 369 LVD-------ALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELF 421
Query: 176 KKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLI 235
M S L K ++Y + ID K G A E F +MK +GI P +V C +
Sbjct: 422 GNMES------LGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASL 475
Query: 236 HGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLN 295
+ AG E +F + D+G P+ +T+N+M+ C K G+I+EA LL M++ G
Sbjct: 476 YSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCE 535
Query: 296 PDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSL 355
PD NSL++ R+D A ++F+ M K TVV+YN L+ G K ++EA+ L
Sbjct: 536 PDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIEL 595
Query: 356 YRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCK 415
+ ++ G IT+NTL L + + A K+ +M PD+ TYN +I GL K
Sbjct: 596 FEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVK 655
Query: 416 NNCVQEAVKLFHMLEMNKFEFGIEIFNC-LIDGLCKAGRLDNA----------------- 457
N V+EA+ FH +M K + + C L+ G+ KA +++A
Sbjct: 656 NGQVKEAMCFFH--QMKKLVYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPAN 713
Query: 458 --WE-LFHKLPQKGLVPTVVTYS--IMIHGLCRKGK------------------------ 488
WE L + + + V++S ++ +G+CR G
Sbjct: 714 LFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFE 773
Query: 489 ---------------------------LEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQN 521
+E A D L ++ GC P+V T+N L+ + ++
Sbjct: 774 KFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKS 833
Query: 522 NKTSKVVELLHKMA--EPERNLVPDDTTFSIVVDLLAKDEK---YHECSAVSKSSYRACL 576
K ++ EL +M+ E E N + + S +V D+ Y++ + S AC
Sbjct: 834 GKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACT 893
Query: 577 Y 577
Y
Sbjct: 894 Y 894
Score = 189 bits (479), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 153/580 (26%), Positives = 270/580 (46%), Gaps = 60/580 (10%)
Query: 49 CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
C S + ++EA M P + N L + K D + ++ + L P
Sbjct: 512 CYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKP 571
Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
+T N L+ GL +I+EA LF+ M+ G P+ IT+ TL + C+ +
Sbjct: 572 TVVTYNTLL-------AGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEV 624
Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
++AL++ KM+ + G + ++F+Y+ II L K G V +A F +MK + + P
Sbjct: 625 TLALKMLFKMM----DMGCVP--DVFTYNTIIFGLVKNGQVKEAMCFFHQMK-KLVYPDF 677
Query: 229 VVCTTLIHG------------------FCCAGN-----WEEVNGLFIEMLDLGPRPNLLT 265
V TL+ G + CA WE++ G +L N ++
Sbjct: 678 VTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIG---SILAEAGIDNAVS 734
Query: 266 FN-----------------VMIDCLCKGGKINEANGLLELMIQR-GLNPDRFTYNSLMDG 307
F+ +I CK ++ A L E + G+ P TYN L+ G
Sbjct: 735 FSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGG 794
Query: 308 YCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQT 367
I+ A+++FL + S GC V +YN L++ Y K ++E LY+++ ++
Sbjct: 795 LLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEAN 854
Query: 368 VITYNTLLSGLFQAGQAGYAQKLF-DEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLF 426
IT+N ++SGL +AG A L+ D M + P TY LIDGL K+ + EA +LF
Sbjct: 855 TITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLF 914
Query: 427 HMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRK 486
+ I+N LI+G KAG D A LF ++ ++G+ P + TYS+++ LC
Sbjct: 915 EGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMV 974
Query: 487 GKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDT 546
G++++ + ++++G P+VV +N +++G ++++ + + L ++M + R + PD
Sbjct: 975 GRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEM-KTSRGITPDLY 1033
Query: 547 TFSIVVDLLAKDEKYHECSAVSKSSYRACLYVTIFQPSSL 586
T++ ++ L E + RA L +F ++L
Sbjct: 1034 TYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNAL 1073
Score = 172 bits (435), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 133/484 (27%), Positives = 233/484 (48%), Gaps = 44/484 (9%)
Query: 66 MTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTL------------ 113
M M P + ++N + + KN + F+ ++ + + PDF+TL
Sbjct: 634 MMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKL-VYPDFVTLCTLLPGVVKASL 692
Query: 114 ---------NILINCFGNKERGLCVENRIKE--ATWLFKNMIAFGVRPDVITYGTLINGF 162
N L NC ++ L E+ I A N ++F R + NG
Sbjct: 693 IEDAYKIITNFLYNC-ADQPANLFWEDLIGSILAEAGIDNAVSFSER-------LVANGI 744
Query: 163 CRTGN--LSVALRLHKKM--VSG------DYENGLISKTNIFSYSIIIDSLCKEGLVDKA 212
CR G+ L +R K VSG + L + + +Y+++I L + +++ A
Sbjct: 745 CRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIA 804
Query: 213 KELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDC 272
+++FL++K G P V L+ + +G +E+ L+ EM N +T N++I
Sbjct: 805 QDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISG 864
Query: 273 LCKGGKINEANGLL-ELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKH 331
L K G +++A L +LM R +P TY L+DG GR+ A+++F M GC+
Sbjct: 865 LVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRP 924
Query: 332 TVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLF 391
YNILING+ K + A +L+++++ GVR + TY+ L+ L G+ F
Sbjct: 925 NCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYF 984
Query: 392 DEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNK-FEFGIEIFNCLIDGLCK 450
E+K + PD+ YN++I+GL K++ ++EA+ LF+ ++ ++ + +N LI L
Sbjct: 985 KELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGI 1044
Query: 451 AGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVT 510
AG ++ A ++++++ + GL P V T++ +I G GK E A M G +PN T
Sbjct: 1045 AGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGT 1104
Query: 511 FNTL 514
+ L
Sbjct: 1105 YEQL 1108
Score = 139 bits (350), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 119/497 (23%), Positives = 213/497 (42%), Gaps = 51/497 (10%)
Query: 62 FFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLV-SIGLLPDFLTLNILINCF 120
F G M P +SS + + D+ S+++ + ++ L+ T N ++
Sbjct: 69 FSGSMIRKSSKPDLSSSEEVTRGLKSFPDTDSSFSYFKSVAGNLNLVHTTETCNYML--- 125
Query: 121 GNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVS 180
L V+ +++E ++F M ++ D TY T+ G L A +KM
Sbjct: 126 ----EALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKM-- 179
Query: 181 GDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCC 240
E G + N +SY+ +I L K +A E++ M ++ GF
Sbjct: 180 --REFGFV--LNAYSYNGLIHLLLKSRFCTEAMEVYRRM--------------ILEGF-- 219
Query: 241 AGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFT 300
RP+L T++ ++ L K I+ GLL+ M GL P+ +T
Sbjct: 220 -------------------RPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYT 260
Query: 301 YNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQII 360
+ + G+I+ A EI M +GC VV+Y +LI+ C ++ A ++ ++
Sbjct: 261 FTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMK 320
Query: 361 SNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQ 420
+ + +TY TLL ++ + EM+ PD+ T+ IL+D LCK
Sbjct: 321 TGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFG 380
Query: 421 EAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMI 480
EA ++ + +N LI GL + RLD+A ELF + G+ PT TY + I
Sbjct: 381 EAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFI 440
Query: 481 HGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERN 540
+ G A + M+ G APN+V N ++ + + + ++ + + +
Sbjct: 441 DYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDI--G 498
Query: 541 LVPDDTTFSIVVDLLAK 557
LVPD T+++++ +K
Sbjct: 499 LVPDSVTYNMMMKCYSK 515
Score = 124 bits (310), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 87/299 (29%), Positives = 142/299 (47%), Gaps = 36/299 (12%)
Query: 73 PPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILIN-------------- 118
P ++++N L A K+ D + Y+++ + + +T NI+I+
Sbjct: 818 PDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDL 877
Query: 119 ---------------CFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFC 163
+G GL R+ EA LF+ M+ +G RP+ Y LINGF
Sbjct: 878 YYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFG 937
Query: 164 RTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRG 223
+ G A L K+MV + G+ + ++ +YS+++D LC G VD+ F E+K G
Sbjct: 938 KAGEADAACALFKRMV----KEGV--RPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESG 991
Query: 224 INPAVVVCTTLIHGFCCAGNWEEVNGLFIEM-LDLGPRPNLLTFNVMIDCLCKGGKINEA 282
+NP VV +I+G + EE LF EM G P+L T+N +I L G + EA
Sbjct: 992 LNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEA 1051
Query: 283 NGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILIN 341
+ + + GL P+ FT+N+L+ GY L G+ + A ++ +M + G +Y L N
Sbjct: 1052 GKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQLPN 1110
>sp|Q9FMF6|PP444_ARATH Pentatricopeptide repeat-containing protein At5g64320,
mitochondrial OS=Arabidopsis thaliana GN=At5g64320 PE=2
SV=1
Length = 730
Score = 235 bits (600), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 146/500 (29%), Positives = 253/500 (50%), Gaps = 21/500 (4%)
Query: 59 ARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILIN 118
A F+ ++ P P + +F ++ A D+ +S R + G +P+ + LI+
Sbjct: 202 ANVFYDMLSRKIP-PTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIH 260
Query: 119 CFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKM 178
C NR+ EA L + M G PD T+ +I G C+ ++ A ++ +M
Sbjct: 261 SLSK-----C--NRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRM 313
Query: 179 VSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGF 238
+ + I+ Y +++ LCK G VD AK+LF + P +V+ TLIHGF
Sbjct: 314 LIRGFAPDDIT------YGYLMNGLCKIGRVDAAKDLFYRIP----KPEIVIFNTLIHGF 363
Query: 239 CCAGNWEEVNGLFIEML-DLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPD 297
G ++ + +M+ G P++ T+N +I K G + A +L M +G P+
Sbjct: 364 VTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPN 423
Query: 298 RFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYR 357
++Y L+DG+C +G+ID A + M + G K V +N LI+ +CK + EA+ ++R
Sbjct: 424 VYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFR 483
Query: 358 QIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNN 417
++ G + V T+N+L+SGL + + +A L +M V + TYN LI+ +
Sbjct: 484 EMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRG 543
Query: 418 CVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYS 477
++EA KL + + +N LI GLC+AG +D A LF K+ + G P+ ++ +
Sbjct: 544 EIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCN 603
Query: 478 IMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEP 537
I+I+GLCR G +E+A +F M G P++VTFN+L++G + + + + K+
Sbjct: 604 ILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQ-- 661
Query: 538 ERNLVPDDTTFSIVVDLLAK 557
+ PD TF+ ++ L K
Sbjct: 662 AEGIPPDTVTFNTLMSWLCK 681
Score = 224 bits (572), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 149/480 (31%), Positives = 235/480 (48%), Gaps = 33/480 (6%)
Query: 66 MTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKER 125
MT P + L +++K + + ++ +G +PD T N +I
Sbjct: 243 MTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVI-------L 295
Query: 126 GLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKK-------- 177
GLC +RI EA + M+ G PD ITYG L+NG C+ G + A L +
Sbjct: 296 GLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVI 355
Query: 178 ---MVSGDYENGLISKTN------IFSYSIIID---------SLCKEGLVDKAKELFLEM 219
++ G +G + + SY I+ D KEGLV A E+ +M
Sbjct: 356 FNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDM 415
Query: 220 KGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKI 279
+ +G P V T L+ GFC G +E + EM G +PN + FN +I CK +I
Sbjct: 416 RNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRI 475
Query: 280 NEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNIL 339
EA + M ++G PD +T+NSL+ G C V I A + M S+G V+YN L
Sbjct: 476 PEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTL 535
Query: 340 INGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNV 399
IN + + ++EA L +++ G ITYN+L+ GL +AG+ A+ LF++M
Sbjct: 536 INAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGH 595
Query: 400 EPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWE 459
P + NILI+GLC++ V+EAV+ + + I FN LI+GLC+AGR+++
Sbjct: 596 APSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLT 655
Query: 460 LFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFL 519
+F KL +G+ P VT++ ++ LC+ G + A L ++G PN T++ L+ +
Sbjct: 656 MFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSII 715
Score = 196 bits (498), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 129/438 (29%), Positives = 217/438 (49%), Gaps = 20/438 (4%)
Query: 56 LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNI 115
+NEA M +P ++ L + K DA + ++ P+ + N
Sbjct: 303 INEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPK----PEIVIFNT 358
Query: 116 LINCFGNKERGLCVENRIKEATWLFKNMI-AFGVRPDVITYGTLINGFCRTGNLSVALR- 173
LI+ G R+ +A + +M+ ++G+ PDV TY +LI G+ + G + +AL
Sbjct: 359 LIH-------GFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEV 411
Query: 174 LHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTT 233
LH G K N++SY+I++D CK G +D+A + EM G+ P V
Sbjct: 412 LHDMRNKG-------CKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNC 464
Query: 234 LIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRG 293
LI FC E +F EM G +P++ TFN +I LC+ +I A LL MI G
Sbjct: 465 LISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEG 524
Query: 294 LNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAM 353
+ + TYN+L++ + G I AR++ M +G ++YN LI G C+ V++A
Sbjct: 525 VVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKAR 584
Query: 354 SLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGL 413
SL+ +++ +G + I+ N L++GL ++G A + EM L PD+ T+N LI+GL
Sbjct: 585 SLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGL 644
Query: 414 CKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTV 473
C+ +++ + +F L+ FN L+ LCK G + +A L + + G VP
Sbjct: 645 CRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNH 704
Query: 474 VTYSIMIHGLCRKGKLEK 491
T+SI++ + + L++
Sbjct: 705 RTWSILLQSIIPQETLDR 722
Score = 169 bits (429), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 106/372 (28%), Positives = 177/372 (47%), Gaps = 32/372 (8%)
Query: 195 SYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEM 254
SY+++++ L A +F +M R I P + ++ FC + L +M
Sbjct: 184 SYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDM 243
Query: 255 LDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRI 314
G PN + + +I L K ++NEA LLE M G PD T+N ++ G C RI
Sbjct: 244 TKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRI 303
Query: 315 DTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQI--------------- 359
+ A ++ M +G ++Y L+NG CKI V+ A L+ +I
Sbjct: 304 NEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGF 363
Query: 360 -----------------ISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPD 402
S G+ V TYN+L+ G ++ G G A ++ +M+ +P+
Sbjct: 364 VTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPN 423
Query: 403 LSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFH 462
+ +Y IL+DG CK + EA + + + + + FNCLI CK R+ A E+F
Sbjct: 424 VYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFR 483
Query: 463 KLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNN 522
++P+KG P V T++ +I GLC +++ A L M G N VT+NTL++ FL+
Sbjct: 484 EMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRG 543
Query: 523 KTSKVVELLHKM 534
+ + +L+++M
Sbjct: 544 EIKEARKLVNEM 555
Score = 153 bits (387), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 113/405 (27%), Positives = 179/405 (44%), Gaps = 44/405 (10%)
Query: 196 YSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEML 255
Y ++I L G L ++MK GI + +++ + AG + L +EM
Sbjct: 114 YQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEMR 173
Query: 256 DL-GPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRI 314
++ P ++NV+++ L G A + M+ R + P FT+ +M +C V I
Sbjct: 174 NVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEI 233
Query: 315 DTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTL 374
D+A + M GC V Y LI+ K V EA+ L ++ G T+N +
Sbjct: 234 DSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDV 293
Query: 375 LSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKF 434
+ GL + + A K+ + M + PD TY L++GLCK V A LF+ + +
Sbjct: 294 ILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPE- 352
Query: 435 EFGIEIFNCLIDGLCKAGRLDNA---------------------------W--------- 458
I IFN LI G GRLD+A W
Sbjct: 353 ---IVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLAL 409
Query: 459 ELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGF 518
E+ H + KG P V +Y+I++ G C+ GK+++A + L M +G PN V FN L+ F
Sbjct: 410 EVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAF 469
Query: 519 LQNNKTSKVVELLHKMAEPERNLVPDDTTF-SIVVDLLAKDEKYH 562
+ ++ + VE+ +M P + PD TF S++ L DE H
Sbjct: 470 CKEHRIPEAVEIFREM--PRKGCKPDVYTFNSLISGLCEVDEIKH 512
Score = 124 bits (311), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 94/300 (31%), Positives = 138/300 (46%), Gaps = 40/300 (13%)
Query: 49 CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
CK G I+ EA M+ P FN L A K + +R++ G P
Sbjct: 435 CKLGKID--EAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKP 492
Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
D T N LI+ GLC + IK A WL ++MI+ GV + +TY TLIN F R G +
Sbjct: 493 DVYTFNSLIS-------GLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEI 545
Query: 169 SVALRLHKKMV----------------------SGDYENGLISK--------TNIFSYSI 198
A +L +MV D L K +NI S +I
Sbjct: 546 KEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNI-SCNI 604
Query: 199 IIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLG 258
+I+ LC+ G+V++A E EM RG P +V +LI+G C AG E+ +F ++ G
Sbjct: 605 LINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEG 664
Query: 259 PRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAR 318
P+ +TFN ++ LCKGG + +A LL+ I+ G P+ T++ L+ +D R
Sbjct: 665 IPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSIIPQETLDRRR 724
>sp|Q9M9X9|PPR18_ARATH Pentatricopeptide repeat-containing protein At1g06710,
mitochondrial OS=Arabidopsis thaliana GN=At1g06710 PE=2
SV=1
Length = 987
Score = 235 bits (599), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 147/540 (27%), Positives = 262/540 (48%), Gaps = 62/540 (11%)
Query: 71 PSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCF-GNKE----- 124
PSP I FN L A + + +K+V G +P ++ NILI G+K+
Sbjct: 370 PSPKI--FNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCD 427
Query: 125 ----------------------------RGLCVENRIKEATWLFKNMIAFGVRPDVITYG 156
R LC + ++A + + MI G PD TY
Sbjct: 428 LLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYS 487
Query: 157 TLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELF 216
++N C + +A L ++M G GL++ ++++Y+I++DS CK GL+++A++ F
Sbjct: 488 KVLNYLCNASKMELAFLLFEEMKRG----GLVA--DVYTYTIMVDSFCKAGLIEQARKWF 541
Query: 217 LEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKG 276
EM+ G P VV T LIH + A N LF ML G PN++T++ +ID CK
Sbjct: 542 NEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKA 601
Query: 277 GKINEANGLLELMI----------------QRGLNPDRFTYNSLMDGYCLVGRIDTAREI 320
G++ +A + E M P+ TY +L+DG+C R++ AR++
Sbjct: 602 GQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKL 661
Query: 321 FLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQ 380
+M +GC+ + Y+ LI+G CK+ ++EA + ++ +G T+ TY++L+ F+
Sbjct: 662 LDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFK 721
Query: 381 AGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEI 440
+ A K+ +M + P++ Y +IDGLCK EA KL M+E + +
Sbjct: 722 VKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVT 781
Query: 441 FNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYME 500
+ +IDG G+++ EL ++ KG+ P VTY ++I C+ G L+ A++ L M+
Sbjct: 782 YTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMK 841
Query: 501 KNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEK 560
+ + + ++ GF N + + + LL ++ + + P + + +++D L K ++
Sbjct: 842 QTHWPTHTAGYRKVIEGF--NKEFIESLGLLDEIGQD--DTAPFLSVYRLLIDNLIKAQR 897
Score = 227 bits (579), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 166/619 (26%), Positives = 280/619 (45%), Gaps = 88/619 (14%)
Query: 3 SRTQFRCLFSS-ETVSKVKLSSLFKSPRQIAAVSSPETQLNEFLHENCKSG----IINLN 57
SR+ + CL + ++ +SL +A + L F + CK G + L
Sbjct: 234 SRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREALTLV 293
Query: 58 EARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILI 117
E F P + L + + ++ + F ++ + LP+ +T + L+
Sbjct: 294 ETENFV---------PDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLL 344
Query: 118 -NCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHK 176
C K+ G C + M+ G P + +L++ +C +G+ S A +L K
Sbjct: 345 CGCLNKKQLGRC--------KRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLK 396
Query: 177 KMVSGDYENGLISKTNIFSYSIIIDSLCKE------GLVDKAKELFLEMKGRGINPAVVV 230
KMV + G + Y+I+I S+C + L+D A++ + EM G+ +
Sbjct: 397 KMVKCGHMPGYV------VYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKIN 450
Query: 231 CTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMI 290
++ C AG +E+ + EM+ G P+ T++ +++ LC K+ A L E M
Sbjct: 451 VSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMK 510
Query: 291 QRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVE 350
+ GL D +TY ++D +C G I+ AR+ F M GC VV+Y LI+ Y K V
Sbjct: 511 RGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVS 570
Query: 351 EAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEM-------------KLY 397
A L+ ++S G ++TY+ L+ G +AGQ A ++F+ M K Y
Sbjct: 571 YANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQY 630
Query: 398 N---VEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRL 454
+ P++ TY L+DG CK++ V+EA KL + M E +++ LIDGLCK G+L
Sbjct: 631 DDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKL 690
Query: 455 DNAWELFHKLPQKGL-----------------------------------VPTVVTYSIM 479
D A E+ ++ + G P VV Y+ M
Sbjct: 691 DEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEM 750
Query: 480 IHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPER 539
I GLC+ GK ++A + ME+ GC PNVVT+ ++ GF K +ELL +M +
Sbjct: 751 IDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMG--SK 808
Query: 540 NLVPDDTTFSIVVDLLAKD 558
+ P+ T+ +++D K+
Sbjct: 809 GVAPNYVTYRVLIDHCCKN 827
Score = 195 bits (495), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 131/467 (28%), Positives = 233/467 (49%), Gaps = 28/467 (5%)
Query: 49 CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
CK+G+I +AR +F M + +P + ++ L A K + + ++S G LP
Sbjct: 529 CKAGLIE--QARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLP 586
Query: 109 DFLTLNILINCF---GNKERG------LCVENRIKEATWLFKNMIAFGVRPDVITYGTLI 159
+ +T + LI+ G E+ +C + + FK RP+V+TYG L+
Sbjct: 587 NIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALL 646
Query: 160 NGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEM 219
+GFC++ + A +L M E N Y +ID LCK G +D+A+E+ EM
Sbjct: 647 DGFCKSHRVEEARKLLDAMSMEGCE------PNQIVYDALIDGLCKVGKLDEAQEVKTEM 700
Query: 220 KGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKI 279
G + ++LI + + + + +ML+ PN++ + MID LCK GK
Sbjct: 701 SEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKT 760
Query: 280 NEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNIL 339
+EA L+++M ++G P+ TY +++DG+ ++G+I+T E+ M SKG V+Y +L
Sbjct: 761 DEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVL 820
Query: 340 INGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNV 399
I+ CK ++ A +L ++ Y ++ G + L DE+ +
Sbjct: 821 IDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFIESLG--LLDEIGQDDT 878
Query: 400 EPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGI----EIFNCLIDGLCKAGRLD 455
P LS Y +LID L K ++ A++L E+ F + +N LI+ LC A +++
Sbjct: 879 APFLSVYRLLIDNLIKAQRLEMALRLLE--EVATFSATLVDYSSTYNSLIESLCLANKVE 936
Query: 456 NAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKA---NDFLLYM 499
A++LF ++ +KG++P + ++ +I GL R K+ +A DF+ +M
Sbjct: 937 TAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLLDFISHM 983
Score = 150 bits (379), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 132/499 (26%), Positives = 207/499 (41%), Gaps = 70/499 (14%)
Query: 146 FGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCK 205
F RP TY LI F + L A +H++M + + + F+ SLCK
Sbjct: 229 FRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANL------RMDGFTLRCFAYSLCK 282
Query: 206 EGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLT 265
G K +E ++ P V T LI G C A +EE M PN++T
Sbjct: 283 VG---KWREALTLVETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVT 339
Query: 266 FNVMIDCLCKGGK-INEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSM 324
++ ++ C C K + +L +M+ G P +NSL+ YC G A ++ M
Sbjct: 340 YSTLL-CGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKM 398
Query: 325 HSKGCKHTVVSYNILINGYCK-------------------------ILN----------- 348
G V YNILI C +LN
Sbjct: 399 VKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCL 458
Query: 349 -----VEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDL 403
E+A S+ R++I G TY+ +L+ L A + A LF+EMK + D+
Sbjct: 459 CSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADV 518
Query: 404 STYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHK 463
TY I++D CK +++A K F+ + + + LI KA ++ A ELF
Sbjct: 519 YTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFET 578
Query: 464 LPQKGLVPTVVTYSIMIHGLCRKGKLEKA-------------NDFLLYMEK---NGCAPN 507
+ +G +P +VTYS +I G C+ G++EKA D +Y ++ N PN
Sbjct: 579 MLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPN 638
Query: 508 VVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAV 567
VVT+ L+ GF ++++ + +LL M+ P+ + ++D L K K E V
Sbjct: 639 VVTYGALLDGFCKSHRVEEARKLLDAMS--MEGCEPNQIVYDALIDGLCKVGKLDEAQEV 696
Query: 568 SKSSYRACLYVTIFQPSSL 586
T++ SSL
Sbjct: 697 KTEMSEHGFPATLYTYSSL 715
Score = 100 bits (250), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 85/374 (22%), Positives = 139/374 (37%), Gaps = 81/374 (21%)
Query: 256 DLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRID 315
D RP+ T+N +I K +++ A+ + M L D FT C VG+
Sbjct: 228 DFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKW- 286
Query: 316 TAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLL 375
RE + ++ V Y LI+G C+ EEAM ++ + V+TY+TLL
Sbjct: 287 --REALTLVETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLL 344
Query: 376 SGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFE 435
G Q G +++ + M + P +N L+ C + A KL +
Sbjct: 345 CGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHM 404
Query: 436 FGIEIFNCLIDG-----------------------------------------LCKAGRL 454
G ++N LI LC AG+
Sbjct: 405 PGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKY 464
Query: 455 DNAWELFHKLPQKGLVP-----------------------------------TVVTYSIM 479
+ A+ + ++ +G +P V TY+IM
Sbjct: 465 EKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIM 524
Query: 480 IHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPER 539
+ C+ G +E+A + M + GC PNVVT+ L+H +L+ K S EL M
Sbjct: 525 VDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETML--SE 582
Query: 540 NLVPDDTTFSIVVD 553
+P+ T+S ++D
Sbjct: 583 GCLPNIVTYSALID 596
Score = 82.4 bits (202), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 107/239 (44%), Gaps = 9/239 (3%)
Query: 301 YNSLMDGYCLVGRIDTAR--EIFLSMHSKGCKHTVVSY-NILINGYCKILNVEEAMSLYR 357
YN+L+D L+ R D + E FL K + N+L+ +C+ + A+
Sbjct: 168 YNALVD---LIVRDDDEKVPEEFLQQIRDDDKEVFGEFLNVLVRKHCRNGSFSIALEELG 224
Query: 358 QIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNN 417
++ R + TYN L+ +A + A + EM L N+ D T LCK
Sbjct: 225 RLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVG 284
Query: 418 CVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYS 477
+EA+ L +E F + LI GLC+A + A + +++ +P VVTYS
Sbjct: 285 KWREALTL---VETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYS 341
Query: 478 IMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAE 536
++ G K +L + L M GC P+ FN+L+H + + S +LL KM +
Sbjct: 342 TLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVK 400
Score = 82.4 bits (202), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 127/303 (41%), Gaps = 15/303 (4%)
Query: 266 FNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMH 325
NV++ C+ G + A L + P R TYN L+ + R+D+A I M
Sbjct: 203 LNVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMS 262
Query: 326 SKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAG 385
+ + CK+ EA++L N V TV Y L+SGL +A
Sbjct: 263 LANLRMDGFTLRCFAYSLCKVGKWREALTLVE--TENFVPDTVF-YTKLISGLCEASLFE 319
Query: 386 YAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLI 445
A + M+ + P++ TY+ L+ G + ++ +M+ M +IFN L+
Sbjct: 320 EAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLV 379
Query: 446 DGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKAN-DFLLYMEK--- 501
C +G A++L K+ + G +P V Y+I+I +C G + N D L EK
Sbjct: 380 HAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSIC--GDKDSLNCDLLDLAEKAYS 437
Query: 502 ----NGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAK 557
G N + ++ K K ++ +M + +PD +T+S V++ L
Sbjct: 438 EMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMI--GQGFIPDTSTYSKVLNYLCN 495
Query: 558 DEK 560
K
Sbjct: 496 ASK 498
>sp|Q9LSL9|PP445_ARATH Pentatricopeptide repeat-containing protein At5g65560
OS=Arabidopsis thaliana GN=At5g65560 PE=2 SV=1
Length = 915
Score = 231 bits (590), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 145/448 (32%), Positives = 229/448 (51%), Gaps = 9/448 (2%)
Query: 111 LTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSV 170
L ++I C+ L + E ++ M+ V P++ TY ++NG+C+ GN+
Sbjct: 177 LKYKLIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEE 236
Query: 171 ALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVV 230
A + K+V E GL + F+Y+ +I C+ +D A ++F EM +G V
Sbjct: 237 ANQYVSKIV----EAGL--DPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVA 290
Query: 231 CTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMI 290
T LIHG C A +E LF++M D P + T+ V+I LC + +EA L++ M
Sbjct: 291 YTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEME 350
Query: 291 QRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVE 350
+ G+ P+ TY L+D C + + ARE+ M KG V++YN LINGYCK +E
Sbjct: 351 ETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIE 410
Query: 351 EAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILI 410
+A+ + + S + TYN L+ G + A + ++M V PD+ TYN LI
Sbjct: 411 DAVDVVELMESRKLSPNTRTYNELIKG-YCKSNVHKAMGVLNKMLERKVLPDVVTYNSLI 469
Query: 411 DGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLV 470
DG C++ A +L ++ + +ID LCK+ R++ A +LF L QKG+
Sbjct: 470 DGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVN 529
Query: 471 PTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVEL 530
P VV Y+ +I G C+ GK+++A+ L M C PN +TFN L+HG + K + L
Sbjct: 530 PNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLL 589
Query: 531 LHKMAEPERNLVPDDTTFSIVVDLLAKD 558
KM + L P +T +I++ L KD
Sbjct: 590 EEKMVKI--GLQPTVSTDTILIHRLLKD 615
Score = 230 bits (586), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 156/523 (29%), Positives = 249/523 (47%), Gaps = 37/523 (7%)
Query: 42 NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
N L+ + G+++ E + + M + P I ++N + K + + + K+
Sbjct: 187 NTLLNSLARFGLVD--EMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKI 244
Query: 102 VSIGLLPDFLTLNILINCFGNKE----------------------------RGLCVENRI 133
V GL PDF T LI + ++ GLCV RI
Sbjct: 245 VEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRI 304
Query: 134 KEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNI 193
EA LF M P V TY LI C + S AL L K+M E G+ K NI
Sbjct: 305 DEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEM----EETGI--KPNI 358
Query: 194 FSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIE 253
+Y+++IDSLC + +KA+EL +M +G+ P V+ LI+G+C G E+ +
Sbjct: 359 HTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVEL 418
Query: 254 MLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGR 313
M PN T+N +I CK +++A G+L M++R + PD TYNSL+DG C G
Sbjct: 419 MESRKLSPNTRTYNELIKGYCKSN-VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGN 477
Query: 314 IDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNT 373
D+A + M+ +G +Y +I+ CK VEEA L+ + GV V+ Y
Sbjct: 478 FDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTA 537
Query: 374 LLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNK 433
L+ G +AG+ A + ++M N P+ T+N LI GLC + ++EA L +
Sbjct: 538 LIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIG 597
Query: 434 FEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKAN 493
+ + LI L K G D+A+ F ++ G P TY+ I CR+G+L A
Sbjct: 598 LQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAE 657
Query: 494 DFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAE 536
D + M +NG +P++ T+++L+ G+ +T+ ++L +M +
Sbjct: 658 DMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRD 700
Score = 182 bits (463), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 136/502 (27%), Positives = 239/502 (47%), Gaps = 36/502 (7%)
Query: 36 SPETQ-LNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAV 94
SP T+ NE + CKS N+++A M + P + ++N L ++ ++D+
Sbjct: 425 SPNTRTYNELIKGYCKS---NVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSA 481
Query: 95 ISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVIT 154
+ GL+PD T +I+ LC R++EA LF ++ GV P+V+
Sbjct: 482 YRLLSLMNDRGLVPDQWTYTSMID-------SLCKSKRVEEACDLFDSLEQKGVNPNVVM 534
Query: 155 YGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKE 214
Y LI+G+C+ G + A + +KM+S +N L N +++ +I LC +G + +A
Sbjct: 535 YTALIDGYCKAGKVDEAHLMLEKMLS---KNCL---PNSLTFNALIHGLCADGKLKEATL 588
Query: 215 LFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLC 274
L +M G+ P V T LIH G+++ F +ML G +P+ T+ I C
Sbjct: 589 LEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYC 648
Query: 275 KGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGC---KH 331
+ G++ +A ++ M + G++PD FTY+SL+ GY +G+ + A ++ M GC +H
Sbjct: 649 REGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQH 708
Query: 332 TVVSY--NILINGYCK-------------ILNVEEAMSLYRQIISNGVRQTVITYNTLLS 376
T +S ++L Y K ++ + + L +++ + V +Y L+
Sbjct: 709 TFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLIL 768
Query: 377 GLFQAGQAGYAQKLFDEMKL-YNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFE 435
G+ + G A+K+FD M+ + P +N L+ CK EA K+ +
Sbjct: 769 GICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHL 828
Query: 436 FGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDF 495
+E LI GL K G + +F L Q G + + I+I G+ ++G +E +
Sbjct: 829 PQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYEL 888
Query: 496 LLYMEKNGCAPNVVTFNTLMHG 517
MEKNGC + T++ L+ G
Sbjct: 889 FNVMEKNGCKFSSQTYSLLIEG 910
Score = 182 bits (462), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 107/331 (32%), Positives = 179/331 (54%), Gaps = 3/331 (0%)
Query: 233 TLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQR 292
TL++ G +E+ +++EML+ PN+ T+N M++ CK G + EAN + +++
Sbjct: 188 TLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEA 247
Query: 293 GLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEA 352
GL+PD FTY SL+ GYC +D+A ++F M KGC+ V+Y LI+G C ++EA
Sbjct: 248 GLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEA 307
Query: 353 MSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDG 412
M L+ ++ + TV TY L+ L + + A L EM+ ++P++ TY +LID
Sbjct: 308 MDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDS 367
Query: 413 LCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPT 472
LC ++A +L + + +N LI+G CK G +++A ++ + + L P
Sbjct: 368 LCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPN 427
Query: 473 VVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLH 532
TY+ +I G C K + KA L M + P+VVT+N+L+ G ++ LL
Sbjct: 428 TRTYNELIKGYC-KSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLS 486
Query: 533 KMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
M +R LVPD T++ ++D L K ++ E
Sbjct: 487 LMN--DRGLVPDQWTYTSMIDSLCKSKRVEE 515
>sp|Q9SS81|PP221_ARATH Pentatricopeptide repeat-containing protein At3g09060
OS=Arabidopsis thaliana GN=At3g09060 PE=2 SV=1
Length = 687
Score = 231 bits (590), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 158/543 (29%), Positives = 271/543 (49%), Gaps = 26/543 (4%)
Query: 14 ETVSKVKLSSLFKSPRQIAAVSSPETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSP 73
E VK+ SLF + + A V+ N + +CK +AR F +M P
Sbjct: 126 EAKQWVKVESLF-AYFETAGVAPNLQTYNVLIKMSCKKK--EFEKARGFLDWMWKEGFKP 182
Query: 74 PISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRI 133
+ S++ + +AK D + + ++ G+ PD NILI+ G E
Sbjct: 183 DVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILID-------GFLKEKDH 235
Query: 134 KEATWLFKNMIA-FGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTN 192
K A L+ ++ V P+V T+ +I+G + G + L++ ++M + E +
Sbjct: 236 KTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREK------D 289
Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
+++YS +I LC G VDKA+ +F E+ R + VV T++ GFC G +E L+
Sbjct: 290 LYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELW- 348
Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
+++ N++++N++I L + GKI+EA + LM +G D+ TY + G C+ G
Sbjct: 349 RIMEHKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNG 408
Query: 313 RIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYN 372
++ A + + S G V +Y +I+ CK +EEA +L +++ +GV N
Sbjct: 409 YVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCN 468
Query: 373 TLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMN 432
L+ GL + + G A EM P + +YNILI GLCK EA + N
Sbjct: 469 ALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLEN 528
Query: 433 KFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKA 492
++ ++ ++ L+ GLC+ ++D A EL+H+ Q GL V+ ++I+IHGLC GKL+ A
Sbjct: 529 GWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDA 588
Query: 493 NDFLLYMEKNGCAPNVVTFNTLMHGFLQ---NNKTSKVVELLHKMAEPERNLVPDDTTFS 549
+ ME C N+VT+NTLM GF + +N+ + + ++KM L PD +++
Sbjct: 589 MTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMG-----LQPDIISYN 643
Query: 550 IVV 552
++
Sbjct: 644 TIM 646
Score = 198 bits (504), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 136/455 (29%), Positives = 221/455 (48%), Gaps = 38/455 (8%)
Query: 139 LFKNMIA-FGVRPDVITYGTLINGFC------------------------RTGNLSVALR 173
+FK M FG P + +Y TL+N F +T N+ + +
Sbjct: 100 VFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMS 159
Query: 174 LHKK-------MVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINP 226
KK + ++ G K ++FSYS +I+ L K G +D A ELF EM RG+ P
Sbjct: 160 CKKKEFEKARGFLDWMWKEGF--KPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAP 217
Query: 227 AVVVCTTLIHGFCCAGNWEEVNGLFIEML-DLGPRPNLLTFNVMIDCLCKGGKINEANGL 285
V LI GF + + L+ +L D PN+ T N+MI L K G++++ +
Sbjct: 218 DVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKI 277
Query: 286 LELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCK 345
E M Q D +TY+SL+ G C G +D A +F + + VV+YN ++ G+C+
Sbjct: 278 WERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCR 337
Query: 346 ILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLST 405
++E++ L+R I+ + +++YN L+ GL + G+ A ++ M D +T
Sbjct: 338 CGKIKESLELWR-IMEHKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTT 396
Query: 406 YNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLP 465
Y I I GLC N V +A+ + +E + + + +ID LCK RL+ A L ++
Sbjct: 397 YGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMS 456
Query: 466 QKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTS 525
+ G+ + +I GL R +L +A+ FL M KNGC P VV++N L+ G + K
Sbjct: 457 KHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFG 516
Query: 526 KVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEK 560
+ + +M E PD T+SI++ L +D K
Sbjct: 517 EASAFVKEML--ENGWKPDLKTYSILLCGLCRDRK 549
Score = 193 bits (490), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 124/429 (28%), Positives = 216/429 (50%), Gaps = 8/429 (1%)
Query: 199 IIDSLCKEGLVDKAKELFLEMKG-RGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDL 257
+I + K + D+A ++F M+ G PA+ TL++ F A W +V LF
Sbjct: 84 VIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETA 143
Query: 258 GPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTA 317
G PNL T+NV+I CK + +A G L+ M + G PD F+Y+++++ G++D A
Sbjct: 144 GVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDA 203
Query: 318 REIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISN-GVRQTVITYNTLLS 376
E+F M +G V YNILI+G+ K + + AM L+ +++ + V V T+N ++S
Sbjct: 204 LELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMIS 263
Query: 377 GLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEF 436
GL + G+ K+++ MK E DL TY+ LI GLC V +A +F+ L+ K
Sbjct: 264 GLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASI 323
Query: 437 GIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFL 496
+ +N ++ G C+ G++ + EL+ + K V +V+Y+I+I GL GK+++A
Sbjct: 324 DVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSV-NIVSYNILIKGLLENGKIDEATMIW 382
Query: 497 LYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLA 556
M G A + T+ +HG N +K + ++ ++ +L D ++ ++D L
Sbjct: 383 RLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHL--DVYAYASIIDCLC 440
Query: 557 KDEKYHECSAVSKSSYRACLYVTIFQPSSLGSMIGCTVRLMPQPEMSDTLGDDGDGNAGP 616
K ++ E S + K + + ++IG +R E S L + G P
Sbjct: 441 KKKRLEEASNLVKEMSK---HGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRP 497
Query: 617 IILSAVLLI 625
++S +LI
Sbjct: 498 TVVSYNILI 506
Score = 192 bits (487), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 131/493 (26%), Positives = 232/493 (47%), Gaps = 36/493 (7%)
Query: 56 LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLV-SIGLLPDFLTLN 114
L++A F M+ +P ++ +N+L K + + + + +L+ + P+ T N
Sbjct: 200 LDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHN 259
Query: 115 ILI----------NCFGNKER------------------GLCVENRIKEATWLFKNMIAF 146
I+I +C ER GLC + +A +F +
Sbjct: 260 IMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDER 319
Query: 147 GVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKE 206
DV+TY T++ GFCR G + +L L + M +++N + NI SY+I+I L +
Sbjct: 320 KASIDVVTYNTMLGGFCRCGKIKESLELWRIM---EHKNSV----NIVSYNILIKGLLEN 372
Query: 207 GLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTF 266
G +D+A ++ M +G IHG C G + G+ E+ G ++ +
Sbjct: 373 GKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAY 432
Query: 267 NVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHS 326
+IDCLCK ++ EA+ L++ M + G+ + N+L+ G R+ A M
Sbjct: 433 ASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGK 492
Query: 327 KGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGY 386
GC+ TVVSYNILI G CK EA + ++++ NG + + TY+ LL GL + +
Sbjct: 493 NGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDL 552
Query: 387 AQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLID 446
A +L+ + +E D+ +NILI GLC + +A+ + +E + +N L++
Sbjct: 553 ALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLME 612
Query: 447 GLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAP 506
G K G + A ++ + + GL P +++Y+ ++ GLC + A +F +G P
Sbjct: 613 GFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFP 672
Query: 507 NVVTFNTLMHGFL 519
V T+N L+ +
Sbjct: 673 TVYTWNILVRAVV 685
>sp|Q9SR00|PP213_ARATH Pentatricopeptide repeat-containing protein At3g04760,
chloroplastic OS=Arabidopsis thaliana GN=At3g04760 PE=2
SV=1
Length = 602
Score = 229 bits (583), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 141/492 (28%), Positives = 236/492 (47%), Gaps = 43/492 (8%)
Query: 38 ETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISF 97
+TQ+ + H +C+SG N E+ + M +P + L R+ +
Sbjct: 89 DTQMLKIFHRSCRSG--NYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRV 146
Query: 98 YRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGT 157
L G PD N LIN G C NRI +AT + M + PD +TY
Sbjct: 147 MEILEKFGQ-PDVFAYNALIN-------GFCKMNRIDDATRVLDRMRSKDFSPDTVTYNI 198
Query: 158 LINGFCRTGNLSVALRLHKKMVSGDYENGLIS---------------------------- 189
+I C G L +AL++ +++S + + +I+
Sbjct: 199 MIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRG 258
Query: 190 -KTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVN 248
K ++F+Y+ II +CKEG+VD+A E+ ++ +G P V+ L+ G WEE
Sbjct: 259 LKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGE 318
Query: 249 GLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGY 308
L +M PN++T++++I LC+ GKI EA LL+LM ++GL PD ++Y+ L+ +
Sbjct: 319 KLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAF 378
Query: 309 CLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTV 368
C GR+D A E +M S GC +V+YN ++ CK ++A+ ++ ++ G
Sbjct: 379 CREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNS 438
Query: 369 ITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHM 428
+YNT+ S L+ +G A + EM ++PD TYN +I LC+ V EA +L
Sbjct: 439 SSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVD 498
Query: 429 LEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGL----C 484
+ +F + +N ++ G CKA R+++A + + G P TY+++I G+
Sbjct: 499 MRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGY 558
Query: 485 RKGKLEKANDFL 496
R +E AND +
Sbjct: 559 RAEAMELANDLV 570
Score = 191 bits (486), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 101/333 (30%), Positives = 183/333 (54%), Gaps = 1/333 (0%)
Query: 204 CKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNL 263
C+ G ++ L M +G NP V++CT LI GF N + + +E+L+ +P++
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRV-MEILEKFGQPDV 158
Query: 264 LTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLS 323
+N +I+ CK +I++A +L+ M + +PD TYN ++ C G++D A ++
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQ 218
Query: 324 MHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQ 383
+ S C+ TV++Y ILI V+EA+ L +++S G++ + TYNT++ G+ + G
Sbjct: 219 LLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGM 278
Query: 384 AGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNC 443
A ++ ++L EPD+ +YNIL+ L +E KL + K + + ++
Sbjct: 279 VDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSI 338
Query: 444 LIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNG 503
LI LC+ G+++ A L + +KGL P +Y +I CR+G+L+ A +FL M +G
Sbjct: 339 LITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDG 398
Query: 504 CAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAE 536
C P++V +NT++ +N K + +E+ K+ E
Sbjct: 399 CLPDIVNYNTVLATLCKNGKADQALEIFGKLGE 431
Score = 189 bits (479), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 118/425 (27%), Positives = 203/425 (47%), Gaps = 9/425 (2%)
Query: 128 CVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGL 187
C E+ L + M+ G PDVI LI GF N+ A+R+ + +
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEK------- 152
Query: 188 ISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEV 247
+ ++F+Y+ +I+ CK +D A + M+ + +P V +I C G +
Sbjct: 153 FGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLA 212
Query: 248 NGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDG 307
+ ++L +P ++T+ ++I+ G ++EA L++ M+ RGL PD FTYN+++ G
Sbjct: 213 LKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRG 272
Query: 308 YCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQT 367
C G +D A E+ ++ KGC+ V+SYNIL+ EE L ++ S
Sbjct: 273 MCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPN 332
Query: 368 VITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFH 427
V+TY+ L++ L + G+ A L MK + PD +Y+ LI C+ + A++
Sbjct: 333 VVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLE 392
Query: 428 MLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKG 487
+ + I +N ++ LCK G+ D A E+F KL + G P +Y+ M L G
Sbjct: 393 TMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSG 452
Query: 488 KLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTT 547
+A +L M NG P+ +T+N+++ + + ELL M E P T
Sbjct: 453 DKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCE--FHPSVVT 510
Query: 548 FSIVV 552
++IV+
Sbjct: 511 YNIVL 515
Score = 171 bits (432), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 107/396 (27%), Positives = 191/396 (48%), Gaps = 9/396 (2%)
Query: 163 CRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGR 222
CR+GN +L L + MV Y +I T + + ++ K V + E F +
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFGQ---- 155
Query: 223 GINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEA 282
P V LI+GFC ++ + M P+ +T+N+MI LC GK++ A
Sbjct: 156 ---PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLA 212
Query: 283 NGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILING 342
+L ++ P TY L++ L G +D A ++ M S+G K + +YN +I G
Sbjct: 213 LKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRG 272
Query: 343 YCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPD 402
CK V+ A + R + G VI+YN LL L G+ +KL +M +P+
Sbjct: 273 MCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPN 332
Query: 403 LSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFH 462
+ TY+ILI LC++ ++EA+ L +++ ++ LI C+ GRLD A E
Sbjct: 333 VVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLE 392
Query: 463 KLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNN 522
+ G +P +V Y+ ++ LC+ GK ++A + + + GC+PN ++NT+ +
Sbjct: 393 TMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSG 452
Query: 523 KTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKD 558
+ + ++ +M + PD+ T++ ++ L ++
Sbjct: 453 DKIRALHMILEMM--SNGIDPDEITYNSMISCLCRE 486
Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 71/169 (42%), Gaps = 30/169 (17%)
Query: 42 NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
N L CK+G ++A FG + + SP SS+N +F A+ + + ++
Sbjct: 407 NTVLATLCKNG--KADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEM 464
Query: 102 VSIGLLPDFLTLNILINCFGNKER----------------------------GLCVENRI 133
+S G+ PD +T N +I+C + G C +RI
Sbjct: 465 MSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRI 524
Query: 134 KEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGD 182
++A + ++M+ G RP+ TY LI G G + A+ L +V D
Sbjct: 525 EDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRID 573
>sp|Q9T0D6|PP306_ARATH Pentatricopeptide repeat-containing protein At4g11690
OS=Arabidopsis thaliana GN=At4g11690 PE=2 SV=1
Length = 566
Score = 227 bits (579), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 123/372 (33%), Positives = 205/372 (55%), Gaps = 2/372 (0%)
Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
+++S+ I+I C+ G ++K+ +L +E+ G +P VV+ TTLI G C G E+ LF
Sbjct: 162 DVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLF 221
Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
EM LG N T+ V+I+ L K G + + E M + G+ P+ +TYN +M+ C
Sbjct: 222 FEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKD 281
Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
GR A ++F M +G +V+YN LI G C+ + + EA + Q+ S+G+ +ITY
Sbjct: 282 GRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITY 341
Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
NTL+ G G+ G A L ++K + P L TYNIL+ G C+ A K+ +E
Sbjct: 342 NTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEE 401
Query: 432 NKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEK 491
+ + LID ++ ++ A +L + + GLVP V TYS++IHG C KG++ +
Sbjct: 402 RGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNE 461
Query: 492 ANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIV 551
A+ M + C PN V +NT++ G+ + + + ++LL +M E E L P+ ++ +
Sbjct: 462 ASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKE--LAPNVASYRYM 519
Query: 552 VDLLAKDEKYHE 563
+++L K+ K E
Sbjct: 520 IEVLCKERKSKE 531
Score = 211 bits (536), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 135/488 (27%), Positives = 247/488 (50%), Gaps = 17/488 (3%)
Query: 65 YMTHMQPSP-PISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNK 123
Y+T + S + ++ + +++ + IS++ ++V G +P NCF N
Sbjct: 83 YLTESETSKTKFRLYEVIINSYVQSQSLNLSISYFNEMVDNGFVPG-------SNCF-NY 134
Query: 124 ERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDY 183
V + W F N V DV ++G LI G C G + + L ++ +
Sbjct: 135 LLTFVVGSSSFNQWWSFFNENKSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGF 194
Query: 184 ENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGN 243
N+ Y+ +ID CK+G ++KAK+LF EM G+ T LI+G G
Sbjct: 195 S------PNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGV 248
Query: 244 WEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNS 303
++ ++ +M + G PNL T+N +++ LCK G+ +A + + M +RG++ + TYN+
Sbjct: 249 KKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNT 308
Query: 304 LMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNG 363
L+ G C +++ A ++ M S G +++YN LI+G+C + + +A+SL R + S G
Sbjct: 309 LIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRG 368
Query: 364 VRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAV 423
+ +++TYN L+SG + G A K+ EM+ ++P TY ILID +++ +++A+
Sbjct: 369 LSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAI 428
Query: 424 KLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGL 483
+L +E + ++ LI G C G+++ A LF + +K P V Y+ MI G
Sbjct: 429 QLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGY 488
Query: 484 CRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVP 543
C++G +A L ME+ APNV ++ ++ + K+ + L+ KM + + P
Sbjct: 489 CKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDS--GIDP 546
Query: 544 DDTTFSIV 551
+ S++
Sbjct: 547 STSILSLI 554
Score = 207 bits (526), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 140/491 (28%), Positives = 251/491 (51%), Gaps = 18/491 (3%)
Query: 22 SSLFKSPRQIAAVSSPETQLNEF-LHE---NCKSGIINLNEARYFFGYMTHMQPSPPISS 77
S F S + ++ ET +F L+E N +LN + +F M P +
Sbjct: 72 SQFFTSSSLLHYLTESETSKTKFRLYEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNC 131
Query: 78 FNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEAT 137
FN L V + ++ SF+ + S +L D + ILI +G C I+++
Sbjct: 132 FNYLLTFVVGSSSFNQWWSFFNENKSKVVL-DVYSFGILI-------KGCCEAGEIEKSF 183
Query: 138 WLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYS 197
L + FG P+V+ Y TLI+G C+ G + A L +M + GL++ N +Y+
Sbjct: 184 DLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMG----KLGLVA--NERTYT 237
Query: 198 IIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDL 257
++I+ L K G+ + E++ +M+ G+ P + +++ C G ++ +F EM +
Sbjct: 238 VLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRER 297
Query: 258 GPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTA 317
G N++T+N +I LC+ K+NEAN +++ M G+NP+ TYN+L+DG+C VG++ A
Sbjct: 298 GVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKA 357
Query: 318 REIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSG 377
+ + S+G ++V+YNIL++G+C+ + A + +++ G++ + +TY L+
Sbjct: 358 LSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDT 417
Query: 378 LFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFG 437
++ A +L M+ + PD+ TY++LI G C + EA +LF + E
Sbjct: 418 FARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPN 477
Query: 438 IEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLL 497
I+N +I G CK G A +L ++ +K L P V +Y MI LC++ K ++A +
Sbjct: 478 EVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVE 537
Query: 498 YMEKNGCAPNV 508
M +G P+
Sbjct: 538 KMIDSGIDPST 548
Score = 174 bits (441), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 113/387 (29%), Positives = 197/387 (50%), Gaps = 13/387 (3%)
Query: 189 SKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVN 248
SKT Y +II+S + ++ + F EM G P L+ + ++ +
Sbjct: 90 SKTKFRLYEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWW 149
Query: 249 GLFIE-----MLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNS 303
F E +LD+ +F ++I C+ G+I ++ LL + + G +P+ Y +
Sbjct: 150 SFFNENKSKVVLDV------YSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTT 203
Query: 304 LMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNG 363
L+DG C G I+ A+++F M G +Y +LING K ++ +Y ++ +G
Sbjct: 204 LIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDG 263
Query: 364 VRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAV 423
V + TYN +++ L + G+ A ++FDEM+ V ++ TYN LI GLC+ + EA
Sbjct: 264 VFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEAN 323
Query: 424 KLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGL 483
K+ ++ + + +N LIDG C G+L A L L +GL P++VTY+I++ G
Sbjct: 324 KVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGF 383
Query: 484 CRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVP 543
CRKG A + ME+ G P+ VT+ L+ F +++ K ++L +++ E LVP
Sbjct: 384 CRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQL--RLSMEELGLVP 441
Query: 544 DDTTFSIVVDLLAKDEKYHECSAVSKS 570
D T+S+++ + +E S + KS
Sbjct: 442 DVHTYSVLIHGFCIKGQMNEASRLFKS 468
>sp|Q9FIX3|PP407_ARATH Pentatricopeptide repeat-containing protein At5g39710
OS=Arabidopsis thaliana GN=EMB2745 PE=2 SV=1
Length = 747
Score = 227 bits (578), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 155/522 (29%), Positives = 259/522 (49%), Gaps = 54/522 (10%)
Query: 76 SSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKE 135
S F+L+ + ++ D +S + G +P L+ N +++ +R I
Sbjct: 135 SVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRN------ISF 188
Query: 136 ATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGD------YENGLIS 189
A +FK M+ V P+V TY LI GFC GN+ VAL L KM + N LI
Sbjct: 189 AENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLID 248
Query: 190 -----------------------KTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINP 226
+ N+ SY+++I+ LC+EG + + + EM RG +
Sbjct: 249 GYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSL 308
Query: 227 AVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLL 286
V TLI G+C GN+ + + EML G P+++T+ +I +CK G +N A L
Sbjct: 309 DEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFL 368
Query: 287 ELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKI 346
+ M RGL P+ TY +L+DG+ G ++ A + M+ G +VV+YN LING+C
Sbjct: 369 DQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVT 428
Query: 347 LNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTY 406
+E+A+++ + G+ V++Y+T+LSG ++ A ++ EM ++PD TY
Sbjct: 429 GKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITY 488
Query: 407 NILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIF--NCLIDGLCKAGRLDNAWELFHKL 464
+ LI G C+ +EA L+ EM + + F LI+ C G L+ A +L +++
Sbjct: 489 SSLIQGFCEQRRTKEACDLYE--EMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEM 546
Query: 465 PQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKT 524
+KG++P VVTYS++I+GL ++ + +A LL + P+ VT++TL+ N +
Sbjct: 547 VEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIEN-CSNIEF 605
Query: 525 SKVVELLH------KMAEPE--------RNLVPDDTTFSIVV 552
VV L+ M E + +N PD T ++I++
Sbjct: 606 KSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMI 647
Score = 226 bits (576), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 147/536 (27%), Positives = 256/536 (47%), Gaps = 30/536 (5%)
Query: 55 NLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLN 114
N++ A F M Q SP + ++N+L + D ++ + K+ + G LP+ +T N
Sbjct: 185 NISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYN 244
Query: 115 ILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRL 174
LI+ G C +I + L ++M G+ P++I+Y +ING CR G + +
Sbjct: 245 TLID-------GYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFV 297
Query: 175 HKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTL 234
+M Y + +Y+ +I CKEG +A + EM G+ P+V+ T+L
Sbjct: 298 LTEMNRRGYS------LDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSL 351
Query: 235 IHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGL 294
IH C AGN +M G PN T+ ++D + G +NEA +L M G
Sbjct: 352 IHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGF 411
Query: 295 NPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMS 354
+P TYN+L++G+C+ G+++ A + M KG VVSY+ +++G+C+ +V+EA+
Sbjct: 412 SPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALR 471
Query: 355 LYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLC 414
+ R+++ G++ ITY++L+ G + + A L++EM + PD TY LI+ C
Sbjct: 472 VKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYC 531
Query: 415 KNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVV 474
+++A++L + + + ++ LI+GL K R A L KL + VP+ V
Sbjct: 532 MEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDV 591
Query: 475 TYSIMIH---------------GLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFL 519
TY +I G C KG + +A+ M P+ +N ++HG
Sbjct: 592 TYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHC 651
Query: 520 QNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKSSYRAC 575
+ K L +M + + T +V L K+ K +E ++V R+C
Sbjct: 652 RAGDIRKAYTLYKEMVKS--GFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSC 705
Score = 210 bits (534), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 110/362 (30%), Positives = 200/362 (55%), Gaps = 3/362 (0%)
Query: 193 IFSYSIIIDSLCKEGL-VDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
+ SY+ ++D+ + + A+ +F EM ++P V LI GFC AGN + LF
Sbjct: 169 VLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLF 228
Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
+M G PN++T+N +ID CK KI++ LL M +GL P+ +YN +++G C
Sbjct: 229 DKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCRE 288
Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
GR+ + M+ +G V+YN LI GYCK N +A+ ++ +++ +G+ +VITY
Sbjct: 289 GRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITY 348
Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
+L+ + +AG A + D+M++ + P+ TY L+DG + + EA ++ +
Sbjct: 349 TSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMND 408
Query: 432 NKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEK 491
N F + +N LI+G C G++++A + + +KGL P VV+YS ++ G CR +++
Sbjct: 409 NGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDE 468
Query: 492 ANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIV 551
A M + G P+ +T+++L+ GF + +T + +L +M L PD+ T++ +
Sbjct: 469 ALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRV--GLPPDEFTYTAL 526
Query: 552 VD 553
++
Sbjct: 527 IN 528
Score = 205 bits (522), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 147/541 (27%), Positives = 245/541 (45%), Gaps = 98/541 (18%)
Query: 55 NLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLN 114
N++ A F M P + ++N L K R D R + GL P+ ++ N
Sbjct: 220 NIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYN 279
Query: 115 ILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRL 174
++IN GLC E R+KE +++ M G D +TY TLI G+C+ GN AL +
Sbjct: 280 VVIN-------GLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVM 332
Query: 175 HKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTL 234
H +M+ +GL ++ +Y+ +I S+CK G +++A E +M+ RG+ P TTL
Sbjct: 333 HAEML----RHGLTP--SVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTL 386
Query: 235 IHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGL 294
+ GF G E + EM D G P+++T+N +I+ C GK+ +A +LE M ++GL
Sbjct: 387 VDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGL 446
Query: 295 NPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMS 354
+PD +Y++++ G+C +D A + M KG K ++Y+ LI G+C+ +EA
Sbjct: 447 SPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACD 506
Query: 355 LYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLC 414
LY +++ G+ TY L++ G A +L +EM V PD+ TY++LI+GL
Sbjct: 507 LYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLN 566
Query: 415 KNNCVQEAVKL---------------FHMLEMN--KFEFGIEI----------------- 440
K + +EA +L +H L N EF +
Sbjct: 567 KQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQ 626
Query: 441 ----------------FNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLC 484
+N +I G C+AG + A+ L+ ++ + G + VT ++ L
Sbjct: 627 VFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALH 686
Query: 485 RKGKLEKAN-----------------------------------DFLLYMEKNGCAPNVV 509
++GK+ + N D L M K+G PN +
Sbjct: 687 KEGKVNELNSVIVHVLRSCELSEAEQAKVLVEINHREGNMDVVLDVLAEMAKDGFLPNGI 746
Query: 510 T 510
+
Sbjct: 747 S 747
Score = 204 bits (520), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 122/421 (28%), Positives = 215/421 (51%), Gaps = 9/421 (2%)
Query: 145 AFGVRPDVITYGTLINGFCRTG-NLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSL 203
A G P V++Y +++ R+ N+S A + K+M+ N+F+Y+I+I
Sbjct: 162 AHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVS------PNVFTYNILIRGF 215
Query: 204 CKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNL 263
C G +D A LF +M+ +G P VV TLI G+C ++ L M G PNL
Sbjct: 216 CFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNL 275
Query: 264 LTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLS 323
+++NV+I+ LC+ G++ E + +L M +RG + D TYN+L+ GYC G A +
Sbjct: 276 ISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAE 335
Query: 324 MHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQ 383
M G +V++Y LI+ CK N+ AM Q+ G+ TY TL+ G Q G
Sbjct: 336 MLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGY 395
Query: 384 AGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNC 443
A ++ EM P + TYN LI+G C +++A+ + ++ + ++
Sbjct: 396 MNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYST 455
Query: 444 LIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNG 503
++ G C++ +D A + ++ +KG+ P +TYS +I G C + + ++A D M + G
Sbjct: 456 VLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVG 515
Query: 504 CAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHE 563
P+ T+ L++ + K ++L ++M E+ ++PD T+S++++ L K + E
Sbjct: 516 LPPDEFTYTALINAYCMEGDLEKALQLHNEMV--EKGVLPDVVTYSVLINGLNKQSRTRE 573
Query: 564 C 564
Sbjct: 574 A 574
>sp|Q9FLJ4|PP440_ARATH Pentatricopeptide repeat-containing protein At5g61400
OS=Arabidopsis thaliana GN=At5g61400 PE=2 SV=1
Length = 654
Score = 227 bits (578), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 144/472 (30%), Positives = 237/472 (50%), Gaps = 33/472 (6%)
Query: 69 MQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINC------FGN 122
M+ SP + + + + R +D+V Y+ ++S GL+PD +L C +
Sbjct: 158 MKCSPDSKACLSILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSK 217
Query: 123 KERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGD 182
KE+ L M + G++P+V Y I CR + A +KM
Sbjct: 218 KEK-------------LLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEA----EKMFELM 260
Query: 183 YENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAG 242
++G++ N+++YS +ID CK G V +A L+ E+ + P VVV TL+ GFC A
Sbjct: 261 KKHGVLP--NLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKAR 318
Query: 243 NWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYN 302
LF+ M+ G PNL +N +I CK G + EA GLL M L+PD FTY
Sbjct: 319 ELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYT 378
Query: 303 SLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISN 362
L++G C+ ++ A +F M ++ + +YN LI+GYCK N+E+A+ L ++ ++
Sbjct: 379 ILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTAS 438
Query: 363 GVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEA 422
GV +IT++TL+ G A L+ EM + + PD+ TY LID K ++EA
Sbjct: 439 GVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEA 498
Query: 423 VKLFHMLEMNKFEFGIE----IFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSI 478
++L+ + E GI F CL+DG K GRL A + + + Q+ V ++
Sbjct: 499 LRLYS----DMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTC 554
Query: 479 MIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVEL 530
+I GLC+ G + +A+ F M G P++ ++ +++ G LQ + + + L
Sbjct: 555 LIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQEKRITDTMML 606
Score = 189 bits (479), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 124/400 (31%), Positives = 197/400 (49%), Gaps = 9/400 (2%)
Query: 134 KEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNI 193
+EA W+ + M PD +++NG R ++ M+S GL+ +I
Sbjct: 149 EEALWVSREM---KCSPDSKACLSILNGLVRRRRFDSVWVDYQLMIS----RGLVPDVHI 201
Query: 194 FSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIE 253
Y ++ K+GL K ++L EM GI P V + T I C EE +F
Sbjct: 202 --YFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFEL 259
Query: 254 MLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGR 313
M G PNL T++ MID CK G + +A GL + ++ L P+ + +L+DG+C
Sbjct: 260 MKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARE 319
Query: 314 IDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNT 373
+ TAR +F+ M G + YN LI+G+CK N+ EA+ L ++ S + V TY
Sbjct: 320 LVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTI 379
Query: 374 LLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNK 433
L++GL Q A +LF +MK + P +TYN LI G CK +++A+ L + +
Sbjct: 380 LINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASG 439
Query: 434 FEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKAN 493
E I F+ LIDG C + A L+ ++ KG+VP VVTY+ +I ++ +++A
Sbjct: 440 VEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEAL 499
Query: 494 DFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHK 533
M + G PN TF L+ GF + + S ++ +
Sbjct: 500 RLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQE 539
Score = 176 bits (446), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 115/407 (28%), Positives = 192/407 (47%), Gaps = 15/407 (3%)
Query: 154 TYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAK 213
+ LI F G AL + ++M +S I++ L + D
Sbjct: 134 VFSLLIMEFLEMGLFEEALWVSREMKCSPDSKACLS---------ILNGLVRRRRFDSVW 184
Query: 214 ELFLEMKGRGINPAVVVCTTLIHGFCC--AGNWEEVNGLFIEMLDLGPRPNLLTFNVMID 271
+ M RG+ P V + L CC G + + L EM LG +PN+ + + I
Sbjct: 185 VDYQLMISRGLVPDVHIYFVLFQ--CCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYIL 242
Query: 272 CLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKH 331
LC+ K+ EA + ELM + G+ P+ +TY++++DGYC G + A ++ +
Sbjct: 243 DLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLP 302
Query: 332 TVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLF 391
VV + L++G+CK + A SL+ ++ GV + YN L+ G ++G A L
Sbjct: 303 NVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLL 362
Query: 392 DEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKA 451
EM+ N+ PD+ TY ILI+GLC + V EA +LF ++ + +N LI G CK
Sbjct: 363 SEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKE 422
Query: 452 GRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTF 511
++ A +L ++ G+ P ++T+S +I G C ++ A M G P+VVT+
Sbjct: 423 YNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTY 482
Query: 512 NTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKD 558
L+ + + + L M E + P+D TF+ +VD K+
Sbjct: 483 TALIDAHFKEANMKEALRLYSDMLEA--GIHPNDHTFACLVDGFWKE 527
Score = 131 bits (329), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 99/374 (26%), Positives = 170/374 (45%), Gaps = 15/374 (4%)
Query: 49 CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
CK+G N+ +A + + + P + F L K R S + +V G+ P
Sbjct: 280 CKTG--NVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDP 337
Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
+ N LI+ G C + EA L M + + PDV TY LING C +
Sbjct: 338 NLYVYNCLIH-------GHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQV 390
Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
+ A RL +KM +N I ++ +Y+ +I CKE +++A +L EM G+ P +
Sbjct: 391 AEANRLFQKM-----KNERIFPSSA-TYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNI 444
Query: 229 VVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLEL 288
+ +TLI G+C + + GL+ EM G P+++T+ +ID K + EA L
Sbjct: 445 ITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSD 504
Query: 289 MIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILN 348
M++ G++P+ T+ L+DG+ GR+ A + + + + V + LI G C+
Sbjct: 505 MLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGY 564
Query: 349 VEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNI 408
+ A + + S G+ + +Y ++L G Q + L +M + P+L +
Sbjct: 565 ILRASRFFSDMRSCGITPDICSYVSMLKGHLQEKRITDTMMLQCDMIKTGILPNLLVNQL 624
Query: 409 LIDGLCKNNCVQEA 422
L N V+ A
Sbjct: 625 LARFYQANGYVKSA 638
>sp|Q9LFC5|PP360_ARATH Pentatricopeptide repeat-containing protein At5g01110
OS=Arabidopsis thaliana GN=At5g01110 PE=2 SV=1
Length = 729
Score = 227 bits (578), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 141/535 (26%), Positives = 257/535 (48%), Gaps = 52/535 (9%)
Query: 56 LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNI 115
L EA F + + I + N L G++ + + Y+++ G+ + TLNI
Sbjct: 181 LREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNI 240
Query: 116 LINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLH 175
++N LC + ++++ + GV PD++TY TLI+ + G + A L
Sbjct: 241 MVN-------ALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELM 293
Query: 176 KKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLI 235
M + G +++Y+ +I+ LCK G ++AKE+F EM G++P +L+
Sbjct: 294 NAMPGKGFSPG------VYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLL 347
Query: 236 HGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLN 295
C G+ E +F +M P+L+ F+ M+ + G +++A + + GL
Sbjct: 348 MEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLI 407
Query: 296 PDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYN------------------ 337
PD Y L+ GYC G I A + M +GC VV+YN
Sbjct: 408 PDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKL 467
Query: 338 -----------------ILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQ 380
ILI+G+CK+ N++ AM L++++ +R V+TYNTLL G +
Sbjct: 468 FNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGK 527
Query: 381 AGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEI 440
G A++++ +M + P +Y+IL++ LC + EA +++ + + + I
Sbjct: 528 VGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMI 587
Query: 441 FNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYM- 499
N +I G C++G + K+ +G VP ++Y+ +I+G R+ + KA + M
Sbjct: 588 CNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKME 647
Query: 500 -EKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
E+ G P+V T+N+++HGF + N+ + +L KM ER + PD +T++ +++
Sbjct: 648 EEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMI--ERGVNPDRSTYTCMIN 700
Score = 222 bits (565), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 140/470 (29%), Positives = 226/470 (48%), Gaps = 44/470 (9%)
Query: 135 EATW-LFKNMIAFGVRPDVITYGTLINGFCRTGNLS-VALRLHKKMVSGDYENGLISKTN 192
E W +++ + GV +V T ++N C+ G + V L + G Y +
Sbjct: 217 ELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVY-------PD 269
Query: 193 IFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFI 252
I +Y+ +I + +GL+++A EL M G+G +P V T+I+G C G +E +F
Sbjct: 270 IVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFA 329
Query: 253 EMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVG 312
EML G P+ T+ ++ CK G + E + M R + PD ++S+M + G
Sbjct: 330 EMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSG 389
Query: 313 RIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYN 372
+D A F S+ G V Y ILI GYC+ + AM+L +++ G V+TYN
Sbjct: 390 NLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYN 449
Query: 373 TLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMN 432
T+L GL + G A KLF+EM + PD T ILIDG CK +Q A++LF ++
Sbjct: 450 TILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEK 509
Query: 433 KFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKA 492
+ + +N L+DG K G +D A E++ + K ++PT ++YSI+++ LC KG L +A
Sbjct: 510 RIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEA 569
Query: 493 -----------------------------------NDFLLYMEKNGCAPNVVTFNTLMHG 517
FL M G P+ +++NTL++G
Sbjct: 570 FRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYG 629
Query: 518 FLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAV 567
F++ SK L+ KM E + LVPD T++ ++ + + E V
Sbjct: 630 FVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVV 679
Score = 211 bits (538), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 138/507 (27%), Positives = 241/507 (47%), Gaps = 19/507 (3%)
Query: 41 LNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRK 100
LN ++ CK G + + F + P I ++N L A + +
Sbjct: 238 LNIMVNALCKDG--KMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNA 295
Query: 101 LVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLIN 160
+ G P T N +IN GLC + + A +F M+ G+ PD TY +L+
Sbjct: 296 MPGKGFSPGVYTYNTVIN-------GLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLM 348
Query: 161 GFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMK 220
C+ G++ ++ M S D L+ +S ++ + G +DKA F +K
Sbjct: 349 EACKKGDVVETEKVFSDMRSRDVVPDLVC------FSSMMSLFTRSGNLDKALMYFNSVK 402
Query: 221 GRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKIN 280
G+ P V+ T LI G+C G L EML G +++T+N ++ LCK +
Sbjct: 403 EAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLG 462
Query: 281 EANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILI 340
EA+ L M +R L PD +T L+DG+C +G + A E+F M K + VV+YN L+
Sbjct: 463 EADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLL 522
Query: 341 NGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVE 400
+G+ K+ +++ A ++ ++S + T I+Y+ L++ L G A +++DEM N++
Sbjct: 523 DGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIK 582
Query: 401 PDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWEL 460
P + N +I G C++ + + F +N LI G + + A+ L
Sbjct: 583 PTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGL 642
Query: 461 FHKLP--QKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGF 518
K+ Q GLVP V TY+ ++HG CR+ ++++A L M + G P+ T+ +++GF
Sbjct: 643 VKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGF 702
Query: 519 LQNNKTSKVVELLHKMAEPERNLVPDD 545
+ + ++ + +M +R PDD
Sbjct: 703 VSQDNLTEAFRIHDEML--QRGFSPDD 727
Score = 160 bits (406), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 117/449 (26%), Positives = 206/449 (45%), Gaps = 48/449 (10%)
Query: 153 ITYGTLINGFCRTGNLSVA----LRLHKKMVSGDYE--NGLISK-----TNIFSYSIIID 201
++ +I+ R+G LS A LR+ ++ E N L S +N + ++I
Sbjct: 114 LSLSAMIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCGSNDSVFDLLIR 173
Query: 202 SLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRP 261
+ + + +A E F ++ +G ++ C LI G E G++ E+ G
Sbjct: 174 TYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGI 233
Query: 262 NLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIF 321
N+ T N+M++ LCK GK+ + L + ++G+ PD TYN+L+ Y G ++ A E+
Sbjct: 234 NVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELM 293
Query: 322 LSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQA 381
+M KG V +YN +ING CK E A ++ +++ +G+ TY +LL +
Sbjct: 294 NAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKK 353
Query: 382 GQAGYAQKLFDEMKLYNVEPDLS-----------------------------------TY 406
G +K+F +M+ +V PDL Y
Sbjct: 354 GDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIY 413
Query: 407 NILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQ 466
ILI G C+ + A+ L + + + +N ++ GLCK L A +LF+++ +
Sbjct: 414 TILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTE 473
Query: 467 KGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSK 526
+ L P T +I+I G C+ G L+ A + M++ +VVT+NTL+ GF +
Sbjct: 474 RALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDT 533
Query: 527 VVELLHKMAEPERNLVPDDTTFSIVVDLL 555
E+ M E ++P ++SI+V+ L
Sbjct: 534 AKEIWADMVSKE--ILPTPISYSILVNAL 560
Score = 149 bits (377), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 106/381 (27%), Positives = 181/381 (47%), Gaps = 19/381 (4%)
Query: 190 KTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGR-GINPAVVV---------CTT------ 233
K S S +I L + G + A+ L M R G++ +V C +
Sbjct: 110 KHTSLSLSAMIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCGSNDSVFD 169
Query: 234 -LIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQR 292
LI + A E + F + G ++ N +I L + G + A G+ + + +
Sbjct: 170 LLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRS 229
Query: 293 GLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEA 352
G+ + +T N +++ C G+++ + KG +V+YN LI+ Y +EEA
Sbjct: 230 GVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEA 289
Query: 353 MSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDG 412
L + G V TYNT+++GL + G+ A+++F EM + PD +TY L+
Sbjct: 290 FELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLME 349
Query: 413 LCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPT 472
CK V E K+F + + F+ ++ ++G LD A F+ + + GL+P
Sbjct: 350 ACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPD 409
Query: 473 VVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLH 532
V Y+I+I G CRKG + A + M + GCA +VVT+NT++HG + + +L +
Sbjct: 410 NVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFN 469
Query: 533 KMAEPERNLVPDDTTFSIVVD 553
+M ER L PD T +I++D
Sbjct: 470 EMT--ERALFPDSYTLTILID 488
>sp|Q0WVK7|PPR12_ARATH Pentatricopeptide repeat-containing protein At1g05670,
mitochondrial OS=Arabidopsis thaliana GN=At1g05670 PE=2
SV=1
Length = 741
Score = 226 bits (577), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 153/535 (28%), Positives = 250/535 (46%), Gaps = 39/535 (7%)
Query: 56 LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDA-VISFYRKLVSIGLLPDFLTLN 114
L EAR F M + + S N+ ++K+ + A I +R+ +G+ + + N
Sbjct: 191 LREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYN 250
Query: 115 ILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRL 174
I+I+ +C RIKEA L M G PDVI+Y T++NG+CR G L +L
Sbjct: 251 IVIHF-------VCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKL 303
Query: 175 -----HKKMVSGDYENG-----------LISKTNIFS-------------YSIIIDSLCK 205
K + Y G L FS Y+ +ID CK
Sbjct: 304 IEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCK 363
Query: 206 EGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLT 265
G + A + F EM R I P V+ T +I GFC G+ E LF EM G P+ +T
Sbjct: 364 RGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVT 423
Query: 266 FNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMH 325
F +I+ CK G + +A + MIQ G +P+ TY +L+DG C G +D+A E+ M
Sbjct: 424 FTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMW 483
Query: 326 SKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAG 385
G + + +YN ++NG CK N+EEA+ L + + G+ +TY TL+ ++G+
Sbjct: 484 KIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMD 543
Query: 386 YAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLI 445
AQ++ EM ++P + T+N+L++G C + +++ KL + + FN L+
Sbjct: 544 KAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLV 603
Query: 446 DGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCA 505
C L A ++ + +G+ P TY ++ G C+ +++A M+ G +
Sbjct: 604 KQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFS 663
Query: 506 PNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEK 560
+V T++ L+ GFL+ K + E+ +M L D F D K ++
Sbjct: 664 VSVSTYSVLIKGFLKRKKFLEAREVFDQMR--REGLAADKEIFDFFSDTKYKGKR 716
Score = 224 bits (571), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 136/495 (27%), Positives = 244/495 (49%), Gaps = 15/495 (3%)
Query: 42 NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
N +H C+ G + EA + M +P + S++ + + D V +
Sbjct: 250 NIVIHFVCQLG--RIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVM 307
Query: 102 VSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLING 161
GL P+ +I LC ++ EA F MI G+ PD + Y TLI+G
Sbjct: 308 KRKGLKPNSYIYGSIIGL-------LCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDG 360
Query: 162 FCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKG 221
FC+ G++ A + +M S D ++ +Y+ II C+ G + +A +LF EM
Sbjct: 361 FCKRGDIRAASKFFYEMHSRDI------TPDVLTYTAIISGFCQIGDMVEAGKLFHEMFC 414
Query: 222 RGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINE 281
+G+ P V T LI+G+C AG+ ++ + M+ G PN++T+ +ID LCK G ++
Sbjct: 415 KGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDS 474
Query: 282 ANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILIN 341
AN LL M + GL P+ FTYNS+++G C G I+ A ++ + G V+Y L++
Sbjct: 475 ANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMD 534
Query: 342 GYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEP 401
YCK +++A + ++++ G++ T++T+N L++G G +KL + M + P
Sbjct: 535 AYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAP 594
Query: 402 DLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELF 461
+ +T+N L+ C N ++ A ++ + + + L+ G CKA + AW LF
Sbjct: 595 NATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLF 654
Query: 462 HKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQN 521
++ KG +V TYS++I G ++ K +A + M + G A + F+ +
Sbjct: 655 QEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKG 714
Query: 522 NKTSKVVELLHKMAE 536
+ +V+ + ++ E
Sbjct: 715 KRPDTIVDPIDEIIE 729
Score = 103 bits (258), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 82/336 (24%), Positives = 147/336 (43%), Gaps = 55/336 (16%)
Query: 230 VCTTLIHGFCCAGNWEE----VNGLFIEMLDL--------GPRPNLLTFNVMIDCLCKGG 277
V +LI F WE V F++ DL G P + F+V L G
Sbjct: 137 VAQSLISSF-----WERPKLNVTDSFVQFFDLLVYTYKDWGSDPRV--FDVFFQVLVDFG 189
Query: 278 KINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYN 337
+ EA + E M+ GL V +D+ ++L+ SK C T
Sbjct: 190 LLREARRVFEKMLNYGL----------------VLSVDSC-NVYLTRLSKDCYKTAT--- 229
Query: 338 ILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLY 397
A+ ++R+ GV V +YN ++ + Q G+ A L M+L
Sbjct: 230 --------------AIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELK 275
Query: 398 NVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNA 457
PD+ +Y+ +++G C+ + + KL +++ + I+ +I LC+ +L A
Sbjct: 276 GYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEA 335
Query: 458 WELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHG 517
E F ++ ++G++P V Y+ +I G C++G + A+ F M P+V+T+ ++ G
Sbjct: 336 EEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISG 395
Query: 518 FLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
F Q + +L H+M + L PD TF+ +++
Sbjct: 396 FCQIGDMVEAGKLFHEMF--CKGLEPDSVTFTELIN 429
>sp|Q9SSR4|PPR77_ARATH Pentatricopeptide repeat-containing protein At1g52620
OS=Arabidopsis thaliana GN=At1g52620 PE=2 SV=1
Length = 819
Score = 224 bits (570), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 157/545 (28%), Positives = 268/545 (49%), Gaps = 33/545 (6%)
Query: 41 LNEFLHENCKSGIINLNEARYFFGYMTHMQPS-PPISSFNLLFGAVAKNRHYDAVISFYR 99
L+ LH +SG +L++A + Y+ + S P + + N L + K+R Y
Sbjct: 137 LSHVLHAYAESG--SLSKAVEIYDYVVELYDSVPDVIACNSLLSLLVKSRRLGDARKVYD 194
Query: 100 KLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLI 159
++ G D + IL+ +G+C E +++ L + G P+++ Y T+I
Sbjct: 195 EMCDRGDSVDNYSTCILV-------KGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYNTII 247
Query: 160 NGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEM 219
G+C+ G++ A + K++ + + ++ +I+ CKEG + L E+
Sbjct: 248 GGYCKLGDIENAYLVFKELKLKGF------MPTLETFGTMINGFCKEGDFVASDRLLSEV 301
Query: 220 KGRGINPAVVVCTTLI-----HGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLC 274
K RG+ +V +I HG+ + E G I +P++ T+N++I+ LC
Sbjct: 302 KERGLRVSVWFLNNIIDAKYRHGY--KVDPAESIGWIIAN---DCKPDVATYNILINRLC 356
Query: 275 KGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVV 334
K GK A G L+ ++GL P+ +Y L+ YC D A ++ L M +GCK +V
Sbjct: 357 KEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIV 416
Query: 335 SYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEM 394
+Y ILI+G ++++A+++ ++I GV YN L+SGL + G+ A+ LF EM
Sbjct: 417 TYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEM 476
Query: 395 KLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRL 454
N+ PD Y LIDG ++ EA K+F + + + N +I G C++G L
Sbjct: 477 LDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGML 536
Query: 455 DNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTL 514
D A +++ ++ LVP TYS +I G ++ + A YMEKN C PNVVT+ +L
Sbjct: 537 DEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSL 596
Query: 515 MHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKSSYRA 574
++GF E +M R+LVP+ T++ ++ LAK E S + K+ Y
Sbjct: 597 INGFCCQGDFKMAEETFKEMQ--LRDLVPNVVTYTTLIRSLAK-----ESSTLEKAVYYW 649
Query: 575 CLYVT 579
L +T
Sbjct: 650 ELMMT 654
Score = 182 bits (461), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 134/516 (25%), Positives = 238/516 (46%), Gaps = 54/516 (10%)
Query: 55 NLNEARYFFGYMTHMQPS----------PPISSFNLLFGAVAKNRHYDAVISFYRKLVSI 104
N+ +A+Y GY S P ++++N+L + K + + F +
Sbjct: 315 NIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKK 374
Query: 105 GLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCR 164
GL+P+ L+ LI + C A+ L M G +PD++TYG LI+G
Sbjct: 375 GLIPNNLSYAPLIQAY-------CKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVV 427
Query: 165 TGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGI 224
+G++ A+ + K++ + G+ I Y++++ LCK G AK LF EM R I
Sbjct: 428 SGHMDDAVNMKVKLI----DRGVSPDAAI--YNMLMSGLCKTGRFLPAKLLFSEMLDRNI 481
Query: 225 NPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANG 284
P V TLI GF +G+++E +F ++ G + +++ N MI C+ G ++EA
Sbjct: 482 LPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALA 541
Query: 285 LLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYC 344
+ M + L PD+FTY++++DGY + TA +IF M CK VV+Y LING+C
Sbjct: 542 CMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFC 601
Query: 345 KILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYN-VEPDL 403
+ + A ++++ + V+TY TL+ L + + E+ + N P+
Sbjct: 602 CQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNE 661
Query: 404 STYNILIDGLCK------------NNCVQEAV--KLFHMLEMNKFEFGIEIFNCLIDGLC 449
T+N L+ G K +N Q ++ + FH ++ + + +N + LC
Sbjct: 662 VTFNCLLQGFVKKTSGKVLAEPDGSNHGQSSLFSEFFHRMKSDGWSDHAAAYNSALVCLC 721
Query: 450 KAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGK----------------LEKAN 493
G + A K+ +KG P V+++ ++HG C G LE A
Sbjct: 722 VHGMVKTACMFQDKMVKKGFSPDPVSFAAILHGFCVVGNSKQWRNMDFCNLGEKGLEVAV 781
Query: 494 DFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVE 529
+ +E++ P + +T++H ++ T + VE
Sbjct: 782 RYSQVLEQHLPQPVICEASTILHAMVEKADTKEPVE 817
Score = 136 bits (343), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 87/361 (24%), Positives = 168/361 (46%), Gaps = 2/361 (0%)
Query: 226 PAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGL 285
P V+ C +L+ + + ++ EM D G + + +++ +C GK+ L
Sbjct: 168 PDVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKGMCNEGKVEVGRKL 227
Query: 286 LELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCK 345
+E +G P+ YN+++ GYC +G I+ A +F + KG T+ ++ +ING+CK
Sbjct: 228 IEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCK 287
Query: 346 ILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLST 405
+ + L ++ G+R +V N ++ ++ G + + + +PD++T
Sbjct: 288 EGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVAT 347
Query: 406 YNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLP 465
YNILI+ LCK + AV + LI CK+ D A +L ++
Sbjct: 348 YNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMA 407
Query: 466 QKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTS 525
++G P +VTY I+IHGL G ++ A + + + G +P+ +N LM G + +
Sbjct: 408 ERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFL 467
Query: 526 KVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECSAVSKSSYRACLYVTIFQPSS 585
L +M + RN++PD ++ ++D + + E V S + V + ++
Sbjct: 468 PAKLLFSEMLD--RNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNA 525
Query: 586 L 586
+
Sbjct: 526 M 526
>sp|Q940A6|PP325_ARATH Pentatricopeptide repeat-containing protein At4g19440,
chloroplastic OS=Arabidopsis thaliana GN=At4g19440 PE=2
SV=2
Length = 838
Score = 223 bits (569), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 167/572 (29%), Positives = 267/572 (46%), Gaps = 39/572 (6%)
Query: 10 LFSSETVSKVKLSSLFKSPR---------QIAAVSSPE-----TQLNEFLHENCKSGIIN 55
+F S+T + L+SL ++ + SP+ T +N F CK G
Sbjct: 235 MFPSKTTCNILLTSLVRANEFQKCCEAFDVVCKGVSPDVYLFTTAINAF----CKGG--K 288
Query: 56 LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNI 115
+ EA F M +P + +FN + + YD F K+V G+ P +T +I
Sbjct: 289 VEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSI 348
Query: 116 LINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLH 175
L+ +GL RI +A ++ K M G P+VI Y LI+ F G+L+ A+ +
Sbjct: 349 LV-------KGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIK 401
Query: 176 KKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLI 235
MVS L S T Y+ +I CK G D A+ L EM G N T++I
Sbjct: 402 DLMVSKGL--SLTSST----YNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVI 455
Query: 236 HGFCCAGNWEEVNGLFIEML--DLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRG 293
C ++ EML ++ P LLT +I LCK GK ++A L + +G
Sbjct: 456 CLLCSHLMFDSALRFVGEMLLRNMSPGGGLLT--TLISGLCKHGKHSKALELWFQFLNKG 513
Query: 294 LNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAM 353
D T N+L+ G C G++D A I + +GC VSYN LI+G C ++EA
Sbjct: 514 FVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAF 573
Query: 354 SLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGL 413
+++ G++ TY+ L+ GLF + A + +D+ K + PD+ TY+++IDG
Sbjct: 574 MFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGC 633
Query: 414 CKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTV 473
CK +E + F + + ++N LI C++GRL A EL + KG+ P
Sbjct: 634 CKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNS 693
Query: 474 VTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHK 533
TY+ +I G+ ++E+A M G PNV + L+ G+ + + KV LL +
Sbjct: 694 ATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLRE 753
Query: 534 MAEPERNLVPDDTTFSIVVDLLAKDEKYHECS 565
M +N+ P+ T+++++ A+D E S
Sbjct: 754 MH--SKNVHPNKITYTVMIGGYARDGNVTEAS 783
Score = 154 bits (389), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 107/369 (28%), Positives = 176/369 (47%), Gaps = 13/369 (3%)
Query: 56 LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNI 115
+ A F G M SP L + K+ + + + + ++ G + D T N
Sbjct: 464 FDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNA 523
Query: 116 LINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLH 175
L++ GLC ++ EA + K ++ G D ++Y TLI+G C L A
Sbjct: 524 LLH-------GLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFL 576
Query: 176 KKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLI 235
+MV + GL K + ++YSI+I L V++A + + + K G+ P V + +I
Sbjct: 577 DEMV----KRGL--KPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMI 630
Query: 236 HGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLN 295
G C A EE F EM+ +PN + +N +I C+ G+++ A L E M +G++
Sbjct: 631 DGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGIS 690
Query: 296 PDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSL 355
P+ TY SL+ G ++ R++ A+ +F M +G + V Y LI+GY K+ + + L
Sbjct: 691 PNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECL 750
Query: 356 YRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCK 415
R++ S V ITY ++ G + G A +L +EM+ + PD TY I G K
Sbjct: 751 LREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLK 810
Query: 416 NNCVQEAVK 424
V EA K
Sbjct: 811 QGGVLEAFK 819
Score = 130 bits (326), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 86/315 (27%), Positives = 143/315 (45%), Gaps = 13/315 (4%)
Query: 79 NLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATW 138
N L + + D ++++ G + D ++ N LI+ G C + ++ EA
Sbjct: 522 NALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLIS-------GCCGKKKLDEAFM 574
Query: 139 LFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSI 198
M+ G++PD TY LI G + A++ NG++ ++++YS+
Sbjct: 575 FLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDC----KRNGMLP--DVYTYSV 628
Query: 199 IIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLG 258
+ID CK ++ +E F EM + + P VV LI +C +G L +M G
Sbjct: 629 MIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKG 688
Query: 259 PRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAR 318
PN T+ +I + ++ EA L E M GL P+ F Y +L+DGY +G++
Sbjct: 689 ISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVE 748
Query: 319 EIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGL 378
+ MHSK ++Y ++I GY + NV EA L ++ G+ ITY + G
Sbjct: 749 CLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGY 808
Query: 379 FQAGQAGYAQKLFDE 393
+ G A K DE
Sbjct: 809 LKQGGVLEAFKGSDE 823
>sp|Q9FMQ1|PP376_ARATH Pentatricopeptide repeat-containing protein At5g12100,
mitochondrial OS=Arabidopsis thaliana GN=At5g12100 PE=2
SV=1
Length = 816
Score = 223 bits (567), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 133/464 (28%), Positives = 238/464 (51%), Gaps = 15/464 (3%)
Query: 95 ISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVIT 154
+ + ++ + P N+LI+ GLC R+ +A LF M+A + P +IT
Sbjct: 199 LELFNRMKHDRIYPSVFIYNVLID-------GLCKGKRMNDAEQLFDEMLARRLLPSLIT 251
Query: 155 YGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKE 214
Y TLI+G+C+ GN + ++ ++M + E LI+ ++ ++ L K G+V+ A+
Sbjct: 252 YNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLIT------FNTLLKGLFKAGMVEDAEN 305
Query: 215 LFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLC 274
+ EMK G P + L G+ E G++ +D G + N T +++++ LC
Sbjct: 306 VLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALC 365
Query: 275 KGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVV 334
K GKI +A +L + +GL P+ YN+++DGYC G + AR +M +G K +
Sbjct: 366 KEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHL 425
Query: 335 SYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEM 394
+YN LI +C++ +E A ++ GV +V TYN L+ G + + + EM
Sbjct: 426 AYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEM 485
Query: 395 KLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRL 454
+ P++ +Y LI+ LCK + + EA + +E + I+N LIDG C G++
Sbjct: 486 EDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKI 545
Query: 455 DNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTL 514
++A+ ++ +KG+ +VTY+ +I GL GKL +A D LL + + G P+V T+N+L
Sbjct: 546 EDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSL 605
Query: 515 MHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKD 558
+ G+ + + L +M + P T+ +++ L K+
Sbjct: 606 ISGYGFAGNVQRCIALYEEMKRS--GIKPTLKTYHLLISLCTKE 647
Score = 189 bits (481), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 142/514 (27%), Positives = 246/514 (47%), Gaps = 49/514 (9%)
Query: 50 KSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPD 109
K+G++ +A M + P +F++LF + N +A + Y V G+ +
Sbjct: 296 KAGMVE--DAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMN 353
Query: 110 FLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLS 169
T +IL+N LC E +I++A + +A G+ P+ + Y T+I+G+CR G+L
Sbjct: 354 AYTCSILLN-------ALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDL- 405
Query: 170 VALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVV 229
V R+ + + G+ K + +Y+ +I C+ G ++ A++ +MK +G++P+V
Sbjct: 406 VGARMK---IEAMEKQGM--KPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVE 460
Query: 230 VCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELM 289
LI G+ +++ + EM D G PN++++ +I+CLCKG K+ EA + M
Sbjct: 461 TYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDM 520
Query: 290 IQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNV 349
RG++P YN L+DG C G+I+ A M KG + +V+YN LI+G +
Sbjct: 521 EDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKL 580
Query: 350 EEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNIL 409
EA L +I G++ V TYN+L+SG AG L++EMK ++P L TY++L
Sbjct: 581 SEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLL 640
Query: 410 IDGLCKNNCVQEAVKLFHML------------------------------EMNKFEFGIE 439
I LC ++ +LF + +M + G++
Sbjct: 641 I-SLCTKEGIELTERLFGEMSLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLD 699
Query: 440 --IFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLL 497
+N LI G K G+L L ++ + + P TY+I++ G C A +
Sbjct: 700 KTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYR 759
Query: 498 YMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELL 531
M++ G +V N L+ G L+ SK E++
Sbjct: 760 EMQEKGFLLDVCIGNELVSG-LKEEWRSKEAEIV 792
Score = 188 bits (478), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 142/521 (27%), Positives = 230/521 (44%), Gaps = 44/521 (8%)
Query: 62 FFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCF- 120
F M H + P + +N+L + K + + + ++++ LLP +T N LI+ +
Sbjct: 201 LFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYC 260
Query: 121 --GNKERGLCVENRIK-------------------------EATWLFKNMIAFGVRPDVI 153
GN E+ V R+K +A + K M G PD
Sbjct: 261 KAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAF 320
Query: 154 TYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLIS--KTNIFSYSIIIDSLCKEGLVDK 211
T+ L +G+ AL G YE + S K N ++ SI++++LCKEG ++K
Sbjct: 321 TFSILFDGYSSNEKAEAAL--------GVYETAVDSGVKMNAYTCSILLNALCKEGKIEK 372
Query: 212 AKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMID 271
A+E+ +G+ P V+ T+I G+C G+ M G +P+ L +N +I
Sbjct: 373 AEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIR 432
Query: 272 CLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKH 331
C+ G++ A + M +G++P TYN L+ GY D +I M G
Sbjct: 433 RFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMP 492
Query: 332 TVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLF 391
VVSY LIN CK + EA + R + GV V YN L+ G G+ A +
Sbjct: 493 NVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFS 552
Query: 392 DEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKA 451
EM +E +L TYN LIDGL + EA L + + + +N LI G A
Sbjct: 553 KEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFA 612
Query: 452 GRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTF 511
G + L+ ++ + G+ PT+ TY ++I LC K +E M P+++ +
Sbjct: 613 GNVQRCIALYEEMKRSGIKPTLKTYHLLI-SLCTKEGIELTERLFGEM---SLKPDLLVY 668
Query: 512 NTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVV 552
N ++H + + K L +M E L D TT++ ++
Sbjct: 669 NGVLHCYAVHGDMEKAFNLQKQMIEKSIGL--DKTTYNSLI 707
Score = 171 bits (434), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 103/371 (27%), Positives = 187/371 (50%), Gaps = 2/371 (0%)
Query: 194 FSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIE 253
FSY ++ L + ++ +A +LF ++ GI P+ T L+ + +F+
Sbjct: 110 FSYLLLSVLLNESKMISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLN 169
Query: 254 MLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGR 313
+L+ RP+ + I K + + L M + P F YN L+DG C R
Sbjct: 170 ILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKR 229
Query: 314 IDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNT 373
++ A ++F M ++ ++++YN LI+GYCK N E++ + ++ ++ + ++IT+NT
Sbjct: 230 MNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNT 289
Query: 374 LLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNK 433
LL GLF+AG A+ + EMK PD T++IL DG N + A+ ++ +
Sbjct: 290 LLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSG 349
Query: 434 FEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKAN 493
+ + L++ LCK G+++ A E+ + KGLVP V Y+ MI G CRKG L A
Sbjct: 350 VKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGAR 409
Query: 494 DFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
+ MEK G P+ + +N L+ F + + + ++KM + + P T++I++
Sbjct: 410 MKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMK--LKGVSPSVETYNILIG 467
Query: 554 LLAKDEKYHEC 564
+ ++ +C
Sbjct: 468 GYGRKYEFDKC 478
Score = 147 bits (370), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 93/354 (26%), Positives = 168/354 (47%), Gaps = 44/354 (12%)
Query: 72 SPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVEN 131
SP + ++N+L G + +D +++ G +P+ ++ LINC LC +
Sbjct: 456 SPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINC-------LCKGS 508
Query: 132 RIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKT 191
++ EA + ++M GV P V Y LI+G C G + A R K+M+ E
Sbjct: 509 KLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIE------L 562
Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
N+ +Y+ +ID L G + +A++L LE+ +G+ P V +LI G+ AGN + L+
Sbjct: 563 NLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALY 622
Query: 252 IEML-------------------------------DLGPRPNLLTFNVMIDCLCKGGKIN 280
EM ++ +P+LL +N ++ C G +
Sbjct: 623 EEMKRSGIKPTLKTYHLLISLCTKEGIELTERLFGEMSLKPDLLVYNGVLHCYAVHGDME 682
Query: 281 EANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILI 340
+A L + MI++ + D+ TYNSL+ G VG++ R + M+++ + +YNI++
Sbjct: 683 KAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIV 742
Query: 341 NGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEM 394
G+C++ + A YR++ G V N L+SGL + ++ A+ + EM
Sbjct: 743 KGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVSGLKEEWRSKEAEIVISEM 796
Score = 94.0 bits (232), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 83/306 (27%), Positives = 149/306 (48%), Gaps = 19/306 (6%)
Query: 48 NCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLF-GAVAKNRHYDAVISFYRKLVSIGL 106
NC L EA+ M SP + +N+L G +K + DA F ++++ G+
Sbjct: 502 NCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDA-FRFSKEMLKKGI 560
Query: 107 LPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTG 166
+ +T N LI+ GL + ++ EA L + G++PDV TY +LI+G+ G
Sbjct: 561 ELNLVTYNTLID-------GLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAG 613
Query: 167 NLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINP 226
N+ + L+++M +G+ K + +Y ++I SLC + ++ + LF EM + P
Sbjct: 614 NVQRCIALYEEM----KRSGI--KPTLKTYHLLI-SLCTKEGIELTERLFGEM---SLKP 663
Query: 227 AVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLL 286
++V ++H + G+ E+ L +M++ + T+N +I K GK+ E L+
Sbjct: 664 DLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLI 723
Query: 287 ELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKI 346
+ M R + P+ TYN ++ G+C V +A + M KG V N L++G +
Sbjct: 724 DEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVSGLKEE 783
Query: 347 LNVEEA 352
+EA
Sbjct: 784 WRSKEA 789
>sp|Q9LVQ5|PP432_ARATH Pentatricopeptide repeat-containing protein At5g55840
OS=Arabidopsis thaliana GN=At5g55840 PE=2 SV=2
Length = 1096
Score = 222 bits (566), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 140/524 (26%), Positives = 251/524 (47%), Gaps = 50/524 (9%)
Query: 72 SPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVEN 131
+P + + N + G+V K+ +V SF ++++ + PD T NILIN LC E
Sbjct: 155 NPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINV-------LCAEG 207
Query: 132 RIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKT 191
+++++L + M G P ++TY T+++ +C+ G A+ L M S +
Sbjct: 208 SFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVD------A 261
Query: 192 NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLF 251
++ +Y+++I LC+ + K L +M+ R I+P V TLI+GF G + L
Sbjct: 262 DVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLL 321
Query: 252 IEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLV 311
EML G PN +TFN +ID G EA + +M +GL P +Y L+DG C
Sbjct: 322 NEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKN 381
Query: 312 GRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITY 371
D AR ++ M G ++Y +I+G CK ++EA+ L ++ +G+ ++TY
Sbjct: 382 AEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTY 441
Query: 372 NTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEM 431
+ L++G + G+ A+++ + + P+ Y+ LI C+ C++EA++++ + +
Sbjct: 442 SALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMIL 501
Query: 432 NKFEFGIEIFNCLIDGLCKAGRLDNAWE-------------------------------- 459
FN L+ LCKAG++ A E
Sbjct: 502 EGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLK 561
Query: 460 ---LFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMH 516
+F ++ + G PT TY ++ GLC+ G L +A FL + A + V +NTL+
Sbjct: 562 AFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLT 621
Query: 517 GFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEK 560
++ +K V L +M +R+++PD T++ ++ L + K
Sbjct: 622 AMCKSGNLAKAVSLFGEMV--QRSILPDSYTYTSLISGLCRKGK 663
Score = 212 bits (540), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 160/575 (27%), Positives = 262/575 (45%), Gaps = 88/575 (15%)
Query: 49 CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
C G + ++ Y M +P I ++N + K + A I + S G+
Sbjct: 204 CAEG--SFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDA 261
Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
D T N+LI+ LC NRI + L ++M + P+ +TY TLINGF G +
Sbjct: 262 DVCTYNMLIH-------DLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKV 314
Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
+A +L +M+S GL N +++ +ID EG +A ++F M+ +G+ P+
Sbjct: 315 LIASQLLNEMLS----FGL--SPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSE 368
Query: 229 VVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLEL 288
V L+ G C ++ G ++ M G +T+ MID LCK G ++EA LL
Sbjct: 369 VSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNE 428
Query: 289 MIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKG---------------CK--- 330
M + G++PD TY++L++G+C VGR TA+EI ++ G C+
Sbjct: 429 MSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGC 488
Query: 331 ---------------HTV--VSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNT 373
HT ++N+L+ CK V EA R + S+G+ ++++
Sbjct: 489 LKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDC 548
Query: 374 LLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNK 433
L++G +G+ A +FDEM P TY L+ GLCK ++EA K L
Sbjct: 549 LINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVP 608
Query: 434 FEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGK----- 488
++N L+ +CK+G L A LF ++ Q+ ++P TY+ +I GLCRKGK
Sbjct: 609 AAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAI 668
Query: 489 -------------------------LEKAND------FLLYMEKNGCAPNVVTFNTLMHG 517
+ KA F M+ G P++VT N ++ G
Sbjct: 669 LFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDG 728
Query: 518 FLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVV 552
+ + K K +LL +M +N P+ TT++I++
Sbjct: 729 YSRMGKIEKTNDLLPEMG--NQNGGPNLTTYNILL 761
Score = 187 bits (475), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 108/357 (30%), Positives = 185/357 (51%), Gaps = 2/357 (0%)
Query: 196 YSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEML 255
Y I+I +EG++ + E+F M G NP+V C ++ +G V EML
Sbjct: 126 YDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEML 185
Query: 256 DLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRID 315
P++ TFN++I+ LC G +++ L++ M + G P TYN+++ YC GR
Sbjct: 186 KRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFK 245
Query: 316 TAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLL 375
A E+ M SKG V +YN+LI+ C+ + + L R + + +TYNTL+
Sbjct: 246 AAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLI 305
Query: 376 SGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFE 435
+G G+ A +L +EM + + P+ T+N LIDG +EA+K+F+M+E
Sbjct: 306 NGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLT 365
Query: 436 FGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDF 495
+ L+DGLCK D A + ++ + G+ +TY+ MI GLC+ G L++A
Sbjct: 366 PSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVL 425
Query: 496 LLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVV 552
L M K+G P++VT++ L++GF + + E++ ++ L P+ +S ++
Sbjct: 426 LNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRV--GLSPNGIIYSTLI 480
Score = 178 bits (452), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 114/424 (26%), Positives = 212/424 (50%), Gaps = 8/424 (1%)
Query: 130 ENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLIS 189
E I+++ +F+ M +G P V T ++ ++G K+M+
Sbjct: 136 EGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKI------ 189
Query: 190 KTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNG 249
++ +++I+I+ LC EG +K+ L +M+ G P +V T++H +C G ++
Sbjct: 190 CPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIE 249
Query: 250 LFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYC 309
L M G ++ T+N++I LC+ +I + LL M +R ++P+ TYN+L++G+
Sbjct: 250 LLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFS 309
Query: 310 LVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVI 369
G++ A ++ M S G V++N LI+G+ N +EA+ ++ + + G+ + +
Sbjct: 310 NEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEV 369
Query: 370 TYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHML 429
+Y LL GL + + A+ + MK V TY +IDGLCKN + EAV L + +
Sbjct: 370 SYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEM 429
Query: 430 EMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKL 489
+ + I ++ LI+G CK GR A E+ ++ + GL P + YS +I+ CR G L
Sbjct: 430 SKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCL 489
Query: 490 EKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFS 549
++A M G + TFN L+ + K ++ E + M ++P+ +F
Sbjct: 490 KEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSD--GILPNTVSFD 547
Query: 550 IVVD 553
+++
Sbjct: 548 CLIN 551
Score = 171 bits (434), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 130/487 (26%), Positives = 228/487 (46%), Gaps = 24/487 (4%)
Query: 77 SFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEA 136
+FN+L ++ K F R + S G+LP+ ++ + LIN +GN GL +A
Sbjct: 510 TFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGL-------KA 562
Query: 137 TWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSY 196
+F M G P TYG+L+ G C+ G+L A + K + + + + + Y
Sbjct: 563 FSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSL------HAVPAAVDTVMY 616
Query: 197 SIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLD 256
+ ++ ++CK G + KA LF EM R I P T+LI G C G + LF + +
Sbjct: 617 NTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGK-TVIAILFAKEAE 675
Query: 257 LGPR--PNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRI 314
PN + + +D + K G+ E M G PD T N+++DGY +G+I
Sbjct: 676 ARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKI 735
Query: 315 DTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTL 374
+ ++ M ++ + +YNIL++GY K +V + LYR II NG+ +T ++L
Sbjct: 736 EKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSL 795
Query: 375 LSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKF 434
+ G+ ++ K+ VE D T+N+LI C N + A L ++
Sbjct: 796 VLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGI 855
Query: 435 EFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKAND 494
+ + ++ L + R + + H++ ++G+ P Y +I+GLCR G ++ A
Sbjct: 856 SLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTA-- 913
Query: 495 FLLYMEKNG---CAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIV 551
F++ E C PNV + ++ + K + LL M + + LVP +F+ +
Sbjct: 914 FVVKEEMIAHKICPPNVAE-SAMVRALAKCGKADEATLLLRFMLKMK--LVPTIASFTTL 970
Query: 552 VDLLAKD 558
+ L K+
Sbjct: 971 MHLCCKN 977
Score = 138 bits (348), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 132/542 (24%), Positives = 220/542 (40%), Gaps = 86/542 (15%)
Query: 49 CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
CK+G + EA F MT P SF+ L + S + ++ +G P
Sbjct: 519 CKAG--KVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHP 576
Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
F T +G+ +GLC ++EA K++ A D + Y TL+ C++GNL
Sbjct: 577 TFFT-------YGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNL 629
Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRG-INPA 227
+ A+ L +MV + ++ + ++Y+ +I LC++G A E + RG + P
Sbjct: 630 AKAVSLFGEMV----QRSILPDS--YTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPN 683
Query: 228 VVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLE 287
V+ T + G AG W+ +M +LG P+++T N MID + GKI + N LL
Sbjct: 684 KVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLP 743
Query: 288 LMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKIL 347
M + P+ TYN L+ GY + T+ ++ S+ G ++ + L+ G C+
Sbjct: 744 EMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESN 803
Query: 348 NVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYA-------------------- 387
+E + + + I GV T+N L+S G+ +A
Sbjct: 804 MLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCD 863
Query: 388 ---------------QKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQ------------ 420
+ + EM + P+ Y LI+GLC+ ++
Sbjct: 864 AMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAH 923
Query: 421 -----------------------EAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNA 457
EA L + K I F L+ CK G + A
Sbjct: 924 KICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEA 983
Query: 458 WELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHG 517
EL + GL +V+Y+++I GLC KG + A + M+ +G N T+ L+ G
Sbjct: 984 LELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRG 1043
Query: 518 FL 519
L
Sbjct: 1044 LL 1045
Score = 133 bits (334), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 115/478 (24%), Positives = 211/478 (44%), Gaps = 21/478 (4%)
Query: 21 LSSLFKSPRQIAAVSSPETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNL 80
L SL P + V N L CKSG NL +A FG M P ++
Sbjct: 601 LKSLHAVPAAVDTV-----MYNTLLTAMCKSG--NLAKAVSLFGEMVQRSILPDSYTYTS 653
Query: 81 LFGAVAKNRHYDAVISFYRKLVSIG-LLPDFLTLNILINCFGNKERGLCVENRIKEATWL 139
L + + I F ++ + G +LP+ ++ CF + G+ + K +
Sbjct: 654 LISGLCRKGKTVIAILFAKEAEARGNVLPN----KVMYTCFVD---GMFKAGQWKAGIYF 706
Query: 140 FKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSII 199
+ M G PD++T +I+G+ R G + L +M G+ G N+ +Y+I+
Sbjct: 707 REQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEM--GNQNGG----PNLTTYNIL 760
Query: 200 IDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGP 259
+ K V + L+ + GI P + C +L+ G C + E + + G
Sbjct: 761 LHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGV 820
Query: 260 RPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTARE 319
+ TFN++I C G+IN A L+++M G++ D+ T ++++ R +R
Sbjct: 821 EVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRM 880
Query: 320 IFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLF 379
+ M +G Y LING C++ +++ A + ++I++ + + + ++ L
Sbjct: 881 VLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALA 940
Query: 380 QAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIE 439
+ G+A A L M + P ++++ L+ CKN V EA++L ++ + +
Sbjct: 941 KCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLV 1000
Query: 440 IFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLL 497
+N LI GLC G + A+EL+ ++ G + TY +I GL + D +L
Sbjct: 1001 SYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADIIL 1058
Score = 112 bits (281), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 114/225 (50%), Gaps = 2/225 (0%)
Query: 329 CKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQ 388
C Y+ILI Y + +++++ ++R + G +V T N +L + ++G+
Sbjct: 119 CNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVW 178
Query: 389 KLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGL 448
EM + PD++T+NILI+ LC +++ L +E + + I +N ++
Sbjct: 179 SFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWY 238
Query: 449 CKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNV 508
CK GR A EL + KG+ V TY+++IH LCR ++ K L M K PN
Sbjct: 239 CKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNE 298
Query: 509 VTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVD 553
VT+NTL++GF K +LL++M L P+ TF+ ++D
Sbjct: 299 VTYNTLINGFSNEGKVLIASQLLNEML--SFGLSPNHVTFNALID 341
Score = 38.1 bits (87), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 53/106 (50%), Gaps = 8/106 (7%)
Query: 471 PTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVEL 530
P+V Y I+I R+G ++ + + M G P+V T N ++ +++ + V
Sbjct: 123 PSV--YDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSF 180
Query: 531 LHKMAEPERNLVPDDTTFSIVVDLLAKDEKYHECS----AVSKSSY 572
L +M + R + PD TF+I++++L + + + S + KS Y
Sbjct: 181 LKEMLK--RKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGY 224
>sp|Q9FJE6|PP437_ARATH Putative pentatricopeptide repeat-containing protein At5g59900
OS=Arabidopsis thaliana GN=At5g59900 PE=3 SV=1
Length = 907
Score = 219 bits (559), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 139/460 (30%), Positives = 240/460 (52%), Gaps = 17/460 (3%)
Query: 78 FNLLFGAVAKNRHY-DAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEA 136
F+LL ++R D V+ F + + LLP+ TL+ L++ GL A
Sbjct: 159 FDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLH-------GLVKFRHFGLA 211
Query: 137 TWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSY 196
LF +M++ G+RPDV Y +I C +LS A K+M++ G NI Y
Sbjct: 212 MELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRA----KEMIAHMEATG--CDVNIVPY 265
Query: 197 SIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLD 256
+++ID LCK+ V +A + ++ G+ + P VV TL++G C +E + EML
Sbjct: 266 NVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLC 325
Query: 257 LGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDT 316
L P+ + +++ L K GKI EA L++ ++ G++P+ F YN+L+D C +
Sbjct: 326 LRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHE 385
Query: 317 AREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLS 376
A +F M G + V+Y+ILI+ +C+ ++ A+S +++ G++ +V YN+L++
Sbjct: 386 AELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLIN 445
Query: 377 GLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEF 436
G + G A+ EM +EP + TY L+ G C + +A++L+H +
Sbjct: 446 GHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAP 505
Query: 437 GIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFL 496
I F L+ GL +AG + +A +LF+++ + + P VTY++MI G C +G + KA +FL
Sbjct: 506 SIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFL 565
Query: 497 LYMEKNGCAPNVVTFNTLMHGFLQNNKTSKV---VELLHK 533
M + G P+ ++ L+HG + S+ V+ LHK
Sbjct: 566 KEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHK 605
Score = 207 bits (528), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 158/592 (26%), Positives = 271/592 (45%), Gaps = 97/592 (16%)
Query: 27 SPRQIAAVSSPETQLNEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVA 86
SP + AAVSS L E L + K + EA + SP + +N L ++
Sbjct: 329 SPSE-AAVSS----LVEGLRKRGK-----IEEALNLVKRVVDFGVSPNLFVYNALIDSLC 378
Query: 87 KNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAF 146
K R + + ++ IGL P+ +T +ILI+ F C ++ A M+
Sbjct: 379 KGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMF-------CRRGKLDTALSFLGEMVDT 431
Query: 147 GVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKE 206
G++ V Y +LING C+ G++S A +M++ E + +Y+ ++ C +
Sbjct: 432 GLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLE------PTVVTYTSLMGGYCSK 485
Query: 207 GLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTF 266
G ++KA L+ EM G+GI P++ TTL+ G AG + LF EM + +PN +T+
Sbjct: 486 GKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTY 545
Query: 267 NVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTY------------------------- 301
NVMI+ C+ G +++A L+ M ++G+ PD ++Y
Sbjct: 546 NVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHK 605
Query: 302 ----------NSLMDGYCLVGRIDTA-------------------------------REI 320
L+ G+C G+++ A R++
Sbjct: 606 GNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKL 665
Query: 321 FL----SMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLS 376
F MH +G K V Y +I+ K + +EA ++ +I+ G +TY +++
Sbjct: 666 FFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVIN 725
Query: 377 GLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNC-VQEAVKLFHMLEMNKFE 435
GL +AG A+ L +M+ + P+ TY +D L K +Q+AV+L H +
Sbjct: 726 GLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVEL-HNAILKGLL 784
Query: 436 FGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDF 495
+N LI G C+ GR++ A EL ++ G+ P +TY+ MI+ LCR+ ++KA +
Sbjct: 785 ANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIEL 844
Query: 496 LLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTT 547
M + G P+ V +NTL+HG + K EL ++M + L+P++ T
Sbjct: 845 WNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEML--RQGLIPNNKT 894
Score = 197 bits (500), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 153/626 (24%), Positives = 268/626 (42%), Gaps = 131/626 (20%)
Query: 55 NLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLN 114
+L+ A+ +M I +N+L + K + + + L L PD +T
Sbjct: 242 DLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYC 301
Query: 115 ILIN--C-------------------FGNKE-------RGLCVENRIKEATWLFKNMIAF 146
L+ C F E GL +I+EA L K ++ F
Sbjct: 302 TLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDF 361
Query: 147 GV-----------------------------------RPDVITYGTLINGFCRTGNLSVA 171
GV RP+ +TY LI+ FCR G L A
Sbjct: 362 GVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTA 421
Query: 172 LRLHKKMV---------------SGDYENGLISKTNIF--------------SYSIIIDS 202
L +MV +G + G IS F +Y+ ++
Sbjct: 422 LSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGG 481
Query: 203 LCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPN 262
C +G ++KA L+ EM G+GI P++ TTL+ G AG + LF EM + +PN
Sbjct: 482 YCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPN 541
Query: 263 LLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFL 322
+T+NVMI+ C+ G +++A L+ M ++G+ PD ++Y L+ G CL G+ A+
Sbjct: 542 RVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVD 601
Query: 323 SMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAG 382
+H C+ + Y L++G+C+ +EEA+S+ ++++ GV ++ Y L+ G +
Sbjct: 602 GLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHK 661
Query: 383 QAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEI-F 441
L EM ++PD Y +ID K +EA ++ ++ +N+ E+ +
Sbjct: 662 DRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLM-INEGCVPNEVTY 720
Query: 442 NCLIDGLCKAGRLDNAWEL-----------------------------------FHKLPQ 466
+I+GLCKAG ++ A L H
Sbjct: 721 TAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAIL 780
Query: 467 KGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSK 526
KGL+ TY+++I G CR+G++E+A++ + M +G +P+ +T+ T+++ + N K
Sbjct: 781 KGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKK 840
Query: 527 VVELLHKMAEPERNLVPDDTTFSIVV 552
+EL + M E+ + PD ++ ++
Sbjct: 841 AIELWNSMT--EKGIRPDRVAYNTLI 864
Score = 193 bits (490), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 146/593 (24%), Positives = 248/593 (41%), Gaps = 108/593 (18%)
Query: 66 MTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPD---------------- 109
+T + P + + + L + K RH+ + + +VS+G+ PD
Sbjct: 183 ITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKD 242
Query: 110 -------------------FLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRP 150
+ N+LI+ GLC + ++ EA + K++ ++P
Sbjct: 243 LSRAKEMIAHMEATGCDVNIVPYNVLID-------GLCKKQKVWEAVGIKKDLAGKDLKP 295
Query: 151 DVITYGTLINGFCRTGNLSVALRLHKKM---------------VSGDYENGLISKT---- 191
DV+TY TL+ G C+ + L + +M V G + G I +
Sbjct: 296 DVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLV 355
Query: 192 ----------NIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCA 241
N+F Y+ +IDSLCK +A+ LF M G+ P V + LI FC
Sbjct: 356 KRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRR 415
Query: 242 GNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTY 301
G + EM+D G + ++ +N +I+ CK G I+ A G + MI + L P TY
Sbjct: 416 GKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTY 475
Query: 302 NSLMDGYCLVGRIDTAREIFLSMHSKGCKHTV---------------------------- 333
SLM GYC G+I+ A ++ M KG ++
Sbjct: 476 TSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAE 535
Query: 334 -------VSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGY 386
V+YN++I GYC+ ++ +A +++ G+ +Y L+ GL GQA
Sbjct: 536 WNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASE 595
Query: 387 AQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLID 446
A+ D + N E + Y L+ G C+ ++EA+ + + + + + LID
Sbjct: 596 AKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLID 655
Query: 447 GLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAP 506
G K + L ++ +GL P V Y+ MI + G ++A M GC P
Sbjct: 656 GSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVP 715
Query: 507 NVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDE 559
N VT+ +++G + ++ L KM +P + VP+ T+ +D+L K E
Sbjct: 716 NEVTYTAVINGLCKAGFVNEAEVLCSKM-QPVSS-VPNQVTYGCFLDILTKGE 766
Score = 183 bits (465), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 134/474 (28%), Positives = 219/474 (46%), Gaps = 19/474 (4%)
Query: 42 NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKL 101
N ++ +CK G I+ E F M + + P + ++ L G + + Y ++
Sbjct: 441 NSLINGHCKFGDISAAEG--FMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEM 498
Query: 102 VSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLING 161
G+ P T L++ GL I++A LF M + V+P+ +TY +I G
Sbjct: 499 TGKGIAPSIYTFTTLLS-------GLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEG 551
Query: 162 FCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKG 221
+C G++S A K+M E G++ T +SY +I LC G +AK +F++
Sbjct: 552 YCEEGDMSKAFEFLKEMT----EKGIVPDT--YSYRPLIHGLCLTGQASEAK-VFVDGLH 604
Query: 222 RGINPAVVVC-TTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKIN 280
+G +C T L+HGFC G EE + EM+ G +L+ + V+ID K
Sbjct: 605 KGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRK 664
Query: 281 EANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILI 340
GLL+ M RGL PD Y S++D G A I+ M ++GC V+Y +I
Sbjct: 665 LFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVI 724
Query: 341 NGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKL-FDEMKLYNV 399
NG CK V EA L ++ +TY L + G+ + + L +
Sbjct: 725 NGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLD-ILTKGEVDMQKAVELHNAILKGL 783
Query: 400 EPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWE 459
+ +TYN+LI G C+ ++EA +L + + + +I+ LC+ + A E
Sbjct: 784 LANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIE 843
Query: 460 LFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNT 513
L++ + +KG+ P V Y+ +IHG C G++ KA + M + G PN T T
Sbjct: 844 LWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKTSRT 897
Score = 96.3 bits (238), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 112/228 (49%), Gaps = 2/228 (0%)
Query: 333 VVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFD 392
V + + L++G K + AM L+ ++S G+R V Y ++ L + A+++
Sbjct: 192 VRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIA 251
Query: 393 EMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAG 452
M+ + ++ YN+LIDGLCK V EAV + L + + + L+ GLCK
Sbjct: 252 HMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQ 311
Query: 453 RLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFN 512
+ E+ ++ P+ S ++ GL ++GK+E+A + + + G +PN+ +N
Sbjct: 312 EFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYN 371
Query: 513 TLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKDEK 560
L+ + K + L +M + L P+D T+SI++D+ + K
Sbjct: 372 ALIDSLCKGRKFHEAELLFDRMGKI--GLRPNDVTYSILIDMFCRRGK 417
>sp|Q9FIT7|PP442_ARATH Pentatricopeptide repeat-containing protein At5g61990,
mitochondrial OS=Arabidopsis thaliana GN=At5g61990 PE=2
SV=1
Length = 974
Score = 218 bits (556), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 162/576 (28%), Positives = 262/576 (45%), Gaps = 55/576 (9%)
Query: 49 CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
CK I L +A+ M + S +++LL + K R+ DA ++VS G+
Sbjct: 288 CK--IKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINI 345
Query: 109 DFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNL 168
+ I C +KE +++A LF MIA G+ P Y +LI G+CR N+
Sbjct: 346 KPYMYDCCI-CVMSKE------GVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNV 398
Query: 169 SVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
L +V N +IS ++Y ++ +C G +D A + EM G P V
Sbjct: 399 RQGYEL---LVEMKKRNIVISP---YTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNV 452
Query: 229 VVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLEL 288
V+ TTLI F + + + EM + G P++ +N +I L K +++EA L
Sbjct: 453 VIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVE 512
Query: 289 MIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILN 348
M++ GL P+ FTY + + GY +A + M G V LIN YCK
Sbjct: 513 MVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGK 572
Query: 349 VEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNI 408
V EA S YR ++ G+ TY L++GLF+ + A+++F EM+ + PD+ +Y +
Sbjct: 573 VIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGV 632
Query: 409 LIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKG 468
LI+G K +Q+A +F + + I+N L+ G C++G ++ A EL ++ KG
Sbjct: 633 LINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKG 692
Query: 469 LVPTVVTYSIMIHGLCRKGKLEKANDFLLYME---------------------------- 500
L P VTY +I G C+ G L +A F L+ E
Sbjct: 693 LHPNAVTYCTIIDGYCKSGDLAEA--FRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVER 750
Query: 501 --------KNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEP--ERNLVPDDTTFSI 550
K GCA + FN L++ + KT E+L+++ + +R P+D T++I
Sbjct: 751 AITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNI 810
Query: 551 VVDLLAKDEKYHECSAVSKSSYRACLYVTIFQPSSL 586
++D L K+ + A L T+ +SL
Sbjct: 811 MIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSL 846
Score = 214 bits (546), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 149/521 (28%), Positives = 247/521 (47%), Gaps = 54/521 (10%)
Query: 83 GAVAKNRHYDAVISFY--RKLVSIG--LLPDFLTLNILIN--CFGNKERGLCVENRIKEA 136
G + + + Y ++I Y K V G LL + NI+I+ +G +G+C + A
Sbjct: 377 GLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGA 436
Query: 137 TWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSY 196
+ K MIA G RP+V+ Y TLI F + A+R+ K+M E G+ +IF Y
Sbjct: 437 YNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEM----KEQGI--APDIFCY 490
Query: 197 SIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLD 256
+ +I L K +D+A+ +EM G+ P I G+ A + + EM +
Sbjct: 491 NSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRE 550
Query: 257 LGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDT 316
G PN + +I+ CK GK+ EA M+ +G+ D TY LM+G ++D
Sbjct: 551 CGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDD 610
Query: 317 AREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLS 376
A EIF M KG V SY +LING+ K+ N+++A S++ +++ G+ VI YN LL
Sbjct: 611 AEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLG 670
Query: 377 GLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFEF 436
G ++G+ A++L DEM + + P+ TY +IDG CK+ + EA +LF +++
Sbjct: 671 GFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVP 730
Query: 437 GIEIFNCLIDGLCKAGRLDNAWELF---------HKLPQKGLV----------------- 470
++ L+DG C+ ++ A +F P L+
Sbjct: 731 DSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLN 790
Query: 471 ------------PTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGF 518
P VTY+IMI LC++G LE A + M+ P V+T+ +L++G+
Sbjct: 791 RLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGY 850
Query: 519 LQNNKTSKVVELLHKMAEP-ERNLVPDDTTFSIVVDLLAKD 558
+K + E+ E + PD +S++++ K+
Sbjct: 851 ---DKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKE 888
Score = 200 bits (509), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 132/491 (26%), Positives = 241/491 (49%), Gaps = 25/491 (5%)
Query: 66 MTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKER 125
M +P I +N L ++K + D SF ++V GL P+ T I+
Sbjct: 478 MKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFIS------- 530
Query: 126 GLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYEN 185
G + A K M GV P+ + LIN +C+ G + A ++ MV +
Sbjct: 531 GYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMV----DQ 586
Query: 186 GLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWE 245
G++ +Y+++++ L K VD A+E+F EM+G+GI P V LI+GF GN +
Sbjct: 587 GILGDAK--TYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQ 644
Query: 246 EVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLM 305
+ + +F EM++ G PN++ +N+++ C+ G+I +A LL+ M +GL+P+ TY +++
Sbjct: 645 KASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTII 704
Query: 306 DGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVR 365
DGYC G + A +F M KG Y L++G C++ +VE A++++ G
Sbjct: 705 DGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIF-GTNKKGCA 763
Query: 366 QTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVE----PDLSTYNILIDGLCKNNCVQE 421
+ +N L++ +F+ G+ ++ + + + + P+ TYNI+ID LCK ++
Sbjct: 764 SSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEA 823
Query: 422 AVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIH 481
A +LFH ++ + + L++G K GR + +F + G+ P + YS++I+
Sbjct: 824 AKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIIN 883
Query: 482 GLCRKGKLEKA-----NDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAE 536
++G KA F +GC ++ T L+ GF + + +++ M
Sbjct: 884 AFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVR 943
Query: 537 PERNLVPDDTT 547
+ +PD T
Sbjct: 944 LQ--YIPDSAT 952
Score = 196 bits (499), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 132/493 (26%), Positives = 229/493 (46%), Gaps = 42/493 (8%)
Query: 92 DAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPD 151
D + ++ GL+P T ++LI+ GLC R+++A L M + GV D
Sbjct: 259 DGALKLKESMICKGLVPLKYTYDVLID-------GLCKIKRLEDAKSLLVEMDSLGVSLD 311
Query: 152 VITYGTLINGFCRTGNLSVALRLHKKMVS------------------------------- 180
TY LI+G + N A L +MVS
Sbjct: 312 NHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFD 371
Query: 181 GDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCC 240
G +GLI + +Y+ +I+ C+E V + EL +EMK R I + T++ G C
Sbjct: 372 GMIASGLIPQAQ--AYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCS 429
Query: 241 AGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFT 300
+G+ + + EM+ G RPN++ + +I + + +A +L+ M ++G+ PD F
Sbjct: 430 SGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFC 489
Query: 301 YNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQII 360
YNSL+ G R+D AR + M G K +Y I+GY + A +++
Sbjct: 490 YNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMR 549
Query: 361 SNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQ 420
GV + L++ + G+ A + M + D TY +L++GL KN+ V
Sbjct: 550 ECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVD 609
Query: 421 EAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMI 480
+A ++F + + + LI+G K G + A +F ++ ++GL P V+ Y++++
Sbjct: 610 DAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLL 669
Query: 481 HGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERN 540
G CR G++EKA + L M G PN VT+ T++ G+ ++ ++ L +M +
Sbjct: 670 GGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEM--KLKG 727
Query: 541 LVPDDTTFSIVVD 553
LVPD ++ +VD
Sbjct: 728 LVPDSFVYTTLVD 740
Score = 172 bits (437), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 146/568 (25%), Positives = 244/568 (42%), Gaps = 108/568 (19%)
Query: 78 FNLLF-GAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEA 136
F +LF G +AK +AV F + + L+P +L++ L NR+
Sbjct: 154 FGILFDGYIAKGYIEEAVFVFSSSM-GLELVPRLSRCKVLLD-------ALLRWNRLDLF 205
Query: 137 TWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSV---------------------ALRLH 175
++K M+ V DV TY LI CR GN+ + AL+L
Sbjct: 206 WDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLK 265
Query: 176 KKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLI 235
+ M+ GL+ ++Y ++ID LCK ++ AK L +EM G++ + LI
Sbjct: 266 ESMIC----KGLVPLK--YTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLI 319
Query: 236 HGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLN 295
G N + GL EM+ G ++ I + K G + +A L + MI GL
Sbjct: 320 DGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLI 379
Query: 296 PDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSL 355
P Y SL++GYC + E+ + M + + +Y ++ G C +++ A ++
Sbjct: 380 PQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNI 439
Query: 356 YRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCK 415
+++I++G R V+ Y TL+ Q + G A ++ EMK + PD+ YN LI GL K
Sbjct: 440 VKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSK 499
Query: 416 NNCVQEAVK-LFHMLE----MNKFEFGI-------------------EIFNC-------- 443
+ EA L M+E N F +G E+ C
Sbjct: 500 AKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVL 559
Query: 444 ---LIDGLCKAG-----------------------------------RLDNAWELFHKLP 465
LI+ CK G ++D+A E+F ++
Sbjct: 560 CTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMR 619
Query: 466 QKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTS 525
KG+ P V +Y ++I+G + G ++KA+ M + G PNV+ +N L+ GF ++ +
Sbjct: 620 GKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIE 679
Query: 526 KVVELLHKMAEPERNLVPDDTTFSIVVD 553
K ELL +M+ + L P+ T+ ++D
Sbjct: 680 KAKELLDEMS--VKGLHPNAVTYCTIID 705
Score = 151 bits (382), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 116/432 (26%), Positives = 191/432 (44%), Gaps = 59/432 (13%)
Query: 42 NEFLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVI---SFY 98
N F + SG I +E Y+ M+ + + L G + + VI S Y
Sbjct: 521 NAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAY 580
Query: 99 RKLVSIGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTL 158
R +V G+L D T +L+N GL +++ +A +F+ M G+ PDV +YG L
Sbjct: 581 RSMVDQGILGDAKTYTVLMN-------GLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVL 633
Query: 159 INGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLE 218
INGF + GN+ A + +MV E GL N+ Y++++ C+ G ++KAKEL E
Sbjct: 634 INGFSKLGNMQKASSIFDEMV----EEGLTP--NVIIYNMLLGGFCRSGEIEKAKELLDE 687
Query: 219 MKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGK 278
M +G++P V T+I G+C +G+ E LF EM G P+ + ++D C+
Sbjct: 688 MSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLND 747
Query: 279 INEA--------------------------------------NGLLELMIQRGLNPDRFT 300
+ A N L++ R P+ T
Sbjct: 748 VERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVT 807
Query: 301 YNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQII 360
YN ++D C G ++ A+E+F M + TV++Y L+NGY K+ E ++ + I
Sbjct: 808 YNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAI 867
Query: 361 SNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPD-----LSTYNILIDGLCK 415
+ G+ I Y+ +++ + G A L D+M N D +ST L+ G K
Sbjct: 868 AAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAK 927
Query: 416 NNCVQEAVKLFH 427
++ A K+
Sbjct: 928 VGEMEVAEKVME 939
Score = 146 bits (368), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 117/415 (28%), Positives = 183/415 (44%), Gaps = 60/415 (14%)
Query: 44 FLHENCKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVS 103
++E CK G + EA + M ++ +L + KN D +R++
Sbjct: 563 LINEYCKKG--KVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRG 620
Query: 104 IGLLPDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFC 163
G+ PD + +LIN F +++A+ +F M+ G+ P+VI Y L+ GFC
Sbjct: 621 KGIAPDVFSYGVLINGFSKL-------GNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFC 673
Query: 164 RTGNLSVALRLHKKM-VSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGR 222
R+G + A L +M V G + N + +Y IID CK G + +A LF EMK +
Sbjct: 674 RSGEIEKAKELLDEMSVKGLHPNAV-------TYCTIIDGYCKSGDLAEAFRLFDEMKLK 726
Query: 223 GINPAVVVCTTLIHGFC------------------CAG---------NW----------- 244
G+ P V TTL+ G C CA NW
Sbjct: 727 GLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKT 786
Query: 245 EEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSL 304
E +N L D +PN +T+N+MID LCK G + A L M L P TY SL
Sbjct: 787 EVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSL 846
Query: 305 MDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQI----- 359
++GY +GR +F + G + + Y+++IN + K +A+ L Q+
Sbjct: 847 LNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNA 906
Query: 360 ISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLC 414
+ +G + ++ T LLSG + G+ A+K+ + M PD +T LI+ C
Sbjct: 907 VDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESC 961
Score = 70.1 bits (170), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 124/302 (41%), Gaps = 40/302 (13%)
Query: 243 NWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYN 302
NW + + + LD +F+ + LC G +A ++E MI+R P ++
Sbjct: 85 NWVDSQKVTEQKLD--------SFSFLALDLCNFGSFEKALSVVERMIERNW-PVAEVWS 135
Query: 303 SLMD-GYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIIS 361
S++ VG+ D V + IL +GY +EEA+ ++ +
Sbjct: 136 SIVRCSQEFVGKSDDG----------------VLFGILFDGYIAKGYIEEAVFVFSSSMG 179
Query: 362 NGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQE 421
+ + LL L + + ++ M NV D+ TY++LI C+ VQ
Sbjct: 180 LELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQL 239
Query: 422 AVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIH 481
+ E EF N +D A +L + KGLVP TY ++I
Sbjct: 240 GKDVLFKTEK---EFRTATLN-----------VDGALKLKESMICKGLVPLKYTYDVLID 285
Query: 482 GLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNL 541
GLC+ +LE A L+ M+ G + + T++ L+ G L+ L+H+M N+
Sbjct: 286 GLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINI 345
Query: 542 VP 543
P
Sbjct: 346 KP 347
>sp|Q9SFV9|PP218_ARATH Pentatricopeptide repeat-containing protein At3g07290,
mitochondrial OS=Arabidopsis thaliana GN=At3g07290 PE=2
SV=1
Length = 880
Score = 218 bits (554), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 147/532 (27%), Positives = 248/532 (46%), Gaps = 55/532 (10%)
Query: 56 LNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLTLNI 115
+E R FG+ + P SS LL + + A ++ YR++ + G + +
Sbjct: 147 FDELREVFGFRLNY---PCYSS--LLMSLAKLDLGFLAYVT-YRRMEADGFVVGMIDYRT 200
Query: 116 LINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLH 175
++N LC + A ++ G D +L+ GFCR NL AL++
Sbjct: 201 IVN-------ALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVF 253
Query: 176 KKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLI 235
M + N SYSI+I LC+ G +++A L +M +G P+ T LI
Sbjct: 254 DVM-----SKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLI 308
Query: 236 HGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLN 295
C G ++ LF EM+ G +PN+ T+ V+ID LC+ GKI EANG+ M++ +
Sbjct: 309 KALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIF 368
Query: 296 PDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSL 355
P TYN+L++GYC GR+ A E+ M + CK V ++N L+ G C++ +A+ L
Sbjct: 369 PSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHL 428
Query: 356 YRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCK 415
++++ NG+ +++YN L+ GL + G A KL M +++EPD T+ +I+ CK
Sbjct: 429 LKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCK 488
Query: 416 NNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNA------------------ 457
A ++ LIDG+CK G+ +A
Sbjct: 489 QGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHS 548
Query: 458 -----------------WELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKANDFLLYME 500
+ K+ + GLVP+VVTY+ ++ GL R G + + L M+
Sbjct: 549 LNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMK 608
Query: 501 KNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVV 552
+GC PNV + +++G Q + + +LL M + + P+ T++++V
Sbjct: 609 LSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDS--GVSPNHVTYTVMV 658
Score = 197 bits (501), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 119/429 (27%), Positives = 220/429 (51%), Gaps = 13/429 (3%)
Query: 108 PDFLTLNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGN 167
P+ ++ +ILI+ GLC R++EA L M G +P TY LI C G
Sbjct: 264 PNSVSYSILIH-------GLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGL 316
Query: 168 LSVALRLHKKMVSGDYENGLISKTNIFSYSIIIDSLCKEGLVDKAKELFLEMKGRGINPA 227
+ A L +M+ K N+ +Y+++ID LC++G +++A + +M I P+
Sbjct: 317 IDKAFNLFDEMIPRG------CKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPS 370
Query: 228 VVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLE 287
V+ LI+G+C G L M +PN+ TFN +++ LC+ GK +A LL+
Sbjct: 371 VITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLK 430
Query: 288 LMIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKIL 347
M+ GL+PD +YN L+DG C G ++TA ++ SM+ + +++ +IN +CK
Sbjct: 431 RMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQG 490
Query: 348 NVEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYN 407
+ A + ++ G+ +T TL+ G+ + G+ A + + + + + N
Sbjct: 491 KADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLN 550
Query: 408 ILIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQK 467
+++D L K V+E + + + + + L+DGL ++G + ++ + +
Sbjct: 551 VILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLS 610
Query: 468 GLVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKV 527
G +P V Y+I+I+GLC+ G++E+A L M+ +G +PN VT+ ++ G++ N K +
Sbjct: 611 GCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRA 670
Query: 528 VELLHKMAE 536
+E + M E
Sbjct: 671 LETVRAMVE 679
Score = 194 bits (492), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 133/496 (26%), Positives = 236/496 (47%), Gaps = 28/496 (5%)
Query: 54 INLNEARYFFGYMTHMQPSPPIS-SFNLLFGAVAKNRHYDAVISFYRKLVSIGLLPDFLT 112
+NL +A F M+ P S S+++L + + + ++ G P T
Sbjct: 244 LNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRT 303
Query: 113 LNILINCFGNKERGLCVENRIKEATWLFKNMIAFGVRPDVITYGTLINGFCRTGNLSVAL 172
+LI + LC I +A LF MI G +P+V TY LI+G CR G + A
Sbjct: 304 YTVLI-------KALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEAN 356
Query: 173 RLHKKMVSGDYENGLISKTNIF----SYSIIIDSLCKEGLVDKAKELFLEMKGRGINPAV 228
+ +KMV K IF +Y+ +I+ CK+G V A EL M+ R P V
Sbjct: 357 GVCRKMV----------KDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNV 406
Query: 229 VVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLEL 288
L+ G C G + L MLD G P+++++NV+ID LC+ G +N A LL
Sbjct: 407 RTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSS 466
Query: 289 MIQRGLNPDRFTYNSLMDGYCLVGRIDTAREIFLSMHSKGCKHTVVSYNILINGYCKILN 348
M + PD T+ ++++ +C G+ D A M KG V+ LI+G CK+
Sbjct: 467 MNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGK 526
Query: 349 VEEAMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNI 408
+A+ + ++ + T + N +L L + + + ++ + P + TY
Sbjct: 527 TRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTT 586
Query: 409 LIDGLCKNNCVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKG 468
L+DGL ++ + + ++ +++++ + + +I+GLC+ GR++ A +L + G
Sbjct: 587 LVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSG 646
Query: 469 LVPTVVTYSIMIHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGF------LQNN 522
+ P VTY++M+ G GKL++A + + M + G N +++L+ GF + N+
Sbjct: 647 VSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGFVLSQKGIDNS 706
Query: 523 KTSKVVELLHKMAEPE 538
+ S V ++ + +PE
Sbjct: 707 EESTVSDIALRETDPE 722
Score = 152 bits (383), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 97/322 (30%), Positives = 162/322 (50%), Gaps = 12/322 (3%)
Query: 246 EVNGLFIEMLDLGPRPNLLTFNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLM 305
E +G + M+D + +++ LCK G A + +++ G D SL+
Sbjct: 187 EADGFVVGMID---------YRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLL 237
Query: 306 DGYCLVGRIDTAREIFLSMHSK-GCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGV 364
G+C + A ++F M + C VSY+ILI+G C++ +EEA L Q+ G
Sbjct: 238 LGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGC 297
Query: 365 RQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEAVK 424
+ + TY L+ L G A LFDEM +P++ TY +LIDGLC++ ++EA
Sbjct: 298 QPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANG 357
Query: 425 LFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLC 484
+ + ++ + +N LI+G CK GR+ A+EL + ++ P V T++ ++ GLC
Sbjct: 358 VCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLC 417
Query: 485 RKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPD 544
R GK KA L M NG +P++V++N L+ G + + +LL M ++ PD
Sbjct: 418 RVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMN--CFDIEPD 475
Query: 545 DTTFSIVVDLLAKDEKYHECSA 566
TF+ +++ K K SA
Sbjct: 476 CLTFTAIINAFCKQGKADVASA 497
Score = 149 bits (376), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 145/583 (24%), Positives = 241/583 (41%), Gaps = 109/583 (18%)
Query: 49 CKSGIINLNEARYFFGYMTHMQPSPPISSFNLLFGAVAKNRHYDAVISFYRKLVSIGLLP 108
C G+I+ +A F M P + ++ +L + ++ + RK+V + P
Sbjct: 312 CDRGLID--KAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFP 369
Query: 109 DFLTLNILINCFGNKER----------------------------GLCVENRIKEATWLF 140
+T N LIN + R GLC + +A L
Sbjct: 370 SVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLL 429
Query: 141 KNMIAFGVRPDVITYGTLINGFCRTGNLSVALRLHKKMVSGDYENGLISKTNIFSYSIII 200
K M+ G+ PD+++Y LI+G CR G+++ A +L M D E + +++ II
Sbjct: 430 KRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIE------PDCLTFTAII 483
Query: 201 DSLCKEGLVDKAKELFLEMKGRGINPAVVVCTTLIHGFCCAGNWEEVNGLFIEMLDLGPR 260
++ CK+G D A M +GI+ V TTLI G C G + LFI L+ +
Sbjct: 484 NAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTR--DALFI--LETLVK 539
Query: 261 PNLLT----FNVMIDCLCKGGKINEANGLLELMIQRGLNPDRFTYNSLMDGYCLVGRIDT 316
+LT NV++D L KG K+ E +L + + GL P TY +L+DG G I
Sbjct: 540 MRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITG 599
Query: 317 AREIFLSMHSKGCKHTVVSYNILINGYCKILNVEEAMSLYRQIISNGVRQTVITYNTLLS 376
+ I M GC V Y I+ING C+ VEEA L + +GV +TY ++
Sbjct: 600 SFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVK 659
Query: 377 GLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNN------------------- 417
G G+ A + M E + Y+ L+ G +
Sbjct: 660 GYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGFVLSQKGIDNSEESTVSDIALRET 719
Query: 418 ---CVQEAVKLFHMLEMNKFEFGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGL----- 469
C+ E + + ++ G+ IF L+ LCK GR D + +L + ++G+
Sbjct: 720 DPECINELISVVE--QLGGCISGLCIF--LVTRLCKEGRTDESNDLVQNVLERGVFLEKA 775
Query: 470 -----------------------------VPTVVTYSIMIHGLCRKGKLEKANDFLL-YM 499
VP+ ++ ++I GL ++G E+A + ++ +
Sbjct: 776 MDIIMESYCSKKKHTKCMELITLVLKSGFVPSFKSFCLVIQGLKKEGDAERARELVMELL 835
Query: 500 EKNGCAPN--VVTF-NTLMHGFLQNNKTSKVVELLHKMAEPER 539
NG V+T+ LM G + S+V++L+ ++ ER
Sbjct: 836 TSNGVVEKSGVLTYVECLMEGD-ETGDCSEVIDLVDQLHCRER 877
Score = 99.4 bits (246), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 119/278 (42%), Gaps = 73/278 (26%)
Query: 352 AMSLYRQIISNGVRQTVITYNTLLSGLFQAGQAGYAQ----------------------- 388
A YR++ ++G +I Y T+++ L + G A+
Sbjct: 179 AYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLL 238
Query: 389 ------KLFDEMKLYNV-------EPDLSTYNILIDGLCKNNCVQEAVKLFHMLEMNKFE 435
L D +K+++V P+ +Y+ILI GLC+ ++EA L + +
Sbjct: 239 GFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQ 298
Query: 436 FGIEIFNCLIDGLCKAGRLDNAWELFHKLPQKGLVPTVVTYSIMIHGLCRKGKLEKAN-- 493
+ LI LC G +D A+ LF ++ +G P V TY+++I GLCR GK+E+AN
Sbjct: 299 PSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGV 358
Query: 494 ---------------------------------DFLLYMEKNGCAPNVVTFNTLMHGFLQ 520
+ L MEK C PNV TFN LM G +
Sbjct: 359 CRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCR 418
Query: 521 NNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLLAKD 558
K K V LL +M + L PD ++++++D L ++
Sbjct: 419 VGKPYKAVHLLKRML--DNGLSPDIVSYNVLIDGLCRE 454
Score = 79.0 bits (193), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 107/227 (47%), Gaps = 7/227 (3%)
Query: 363 GVRQTVITYNTLLSGLFQAGQAGYAQKLFDEMKLYNVEPDLSTYNILIDGLCKNNCVQEA 422
G R Y++LL L + A + M+ + Y +++ LCKN EA
Sbjct: 155 GFRLNYPCYSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNG-YTEA 213
Query: 423 VKLFHMLEMNKFEFGIE--IFNCLIDGLCKAGRLDNAWELFHKLPQK-GLVPTVVTYSIM 479
++F M ++ K F ++ I L+ G C+ L +A ++F + ++ P V+YSI+
Sbjct: 214 AEMF-MSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSIL 272
Query: 480 IHGLCRKGKLEKANDFLLYMEKNGCAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPER 539
IHGLC G+LE+A M + GC P+ T+ L+ K L +M R
Sbjct: 273 IHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMI--PR 330
Query: 540 NLVPDDTTFSIVVDLLAKDEKYHECSAVSKSSYRACLYVTIFQPSSL 586
P+ T+++++D L +D K E + V + + ++ ++ ++L
Sbjct: 331 GCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNAL 377
Score = 41.6 bits (96), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 36/180 (20%), Positives = 71/180 (39%), Gaps = 42/180 (23%)
Query: 416 NNCVQEAVKLFHMLEMNKFEFGIEI-FNCLIDGLCKAGRLDN---AWELFHKLPQKGLVP 471
+ C +E +KL + + + FG + + C L +LD A+ + ++ G V
Sbjct: 134 SRCEKEMLKLMYCFDELREVFGFRLNYPCYSSLLMSLAKLDLGFLAYVTYRRMEADGFVV 193
Query: 472 TVVTYSIMIHGLCRKGKLEKANDFLLYMEKNG---------------------------- 503
++ Y +++ LC+ G E A F+ + K G
Sbjct: 194 GMIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVF 253
Query: 504 --------CAPNVVTFNTLMHGFLQNNKTSKVVELLHKMAEPERNLVPDDTTFSIVVDLL 555
CAPN V+++ L+HG + + + L +M E+ P T+++++ L
Sbjct: 254 DVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMG--EKGCQPSTRTYTVLIKAL 311
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.140 0.420
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 231,289,102
Number of Sequences: 539616
Number of extensions: 9822324
Number of successful extensions: 34593
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 419
Number of HSP's successfully gapped in prelim test: 64
Number of HSP's that attempted gapping in prelim test: 20554
Number of HSP's gapped (non-prelim): 2877
length of query: 626
length of database: 191,569,459
effective HSP length: 124
effective length of query: 502
effective length of database: 124,657,075
effective search space: 62577851650
effective search space used: 62577851650
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 64 (29.3 bits)