BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 040281
(258 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224081064|ref|XP_002306281.1| predicted protein [Populus trichocarpa]
gi|222855730|gb|EEE93277.1| predicted protein [Populus trichocarpa]
Length = 304
Score = 290 bits (742), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 179/304 (58%), Positives = 209/304 (68%), Gaps = 46/304 (15%)
Query: 1 MLPLKLIRSLVLGDTINNNHLL------------KQSQTSSQNNQLTSSEKT-------- 40
MLPLKL+RSLVLG+TINN L + TSS NN T+ +
Sbjct: 1 MLPLKLVRSLVLGETINNPPPLLSHHHHHKDINTSYTHTSSDNNTDTTKTRAKTKTKTKT 60
Query: 41 ----PFLLFLPTKELVTDTYRLATIARDMGMDLYPTPSLSHIIFSYPSPSSSSSSSSSTS 96
P LLFLP KELVTDTYRL IARDMGMDLYPTPSLSHIIFSYPS +S S+S+ST
Sbjct: 61 KTKTPLLLFLPNKELVTDTYRLTKIARDMGMDLYPTPSLSHIIFSYPSSCTSPSTSTSTP 120
Query: 97 PSWHSSMSLSSSLI---LPHDAVPLTFPSLSTSSLSHLRSFVSLSKGLFKLVFVTGNSES 153
+ S+S +S+ LP++A+PL FPSL +SSL+HLRSFVSLSKGLFKL F+
Sbjct: 121 CTSSVSLSWTSTSSLLHLPNNAIPLPFPSLYSSSLTHLRSFVSLSKGLFKLAFINSKHTK 180
Query: 154 KV------DNSSSSHWDCCSFSLFSRLNGDRIDSMEAFSRALAGIGWTLFKTKKNS---- 203
KV D+ S+WDCCSFSLF RL GDRIDSM+ FSRALAG+GWTLFKTK+N+
Sbjct: 181 KVMGGYESDSLYDSNWDCCSFSLFWRLTGDRIDSMDKFSRALAGVGWTLFKTKENNTPSD 240
Query: 204 ---NSRSVYLFRKVDSGRV----RANG--CRIRELRLPALDFKNAPLRILQYVVLMTDDV 254
S+ VYLFRKVDS V R NG CRIRELRLPALDF+N PLRIL Y++LMTDD+
Sbjct: 241 GIGGSKMVYLFRKVDSKPVYVVSRGNGGECRIRELRLPALDFRNTPLRILHYILLMTDDI 300
Query: 255 FYLA 258
FYL+
Sbjct: 301 FYLS 304
>gi|359480762|ref|XP_002273892.2| PREDICTED: uncharacterized protein LOC100257607 [Vitis vinifera]
Length = 313
Score = 267 bits (683), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 171/313 (54%), Positives = 202/313 (64%), Gaps = 55/313 (17%)
Query: 1 MLPLKLIRSLVLGDTINNN------------------------HLLKQSQTSSQN---NQ 33
MLPL+L+RSLVLGDTINN+ H + SS++ N+
Sbjct: 1 MLPLRLLRSLVLGDTINNHPLHLHHHHHHHDVVDDDEEEEEETHRSVEEFESSRHKPRNR 60
Query: 34 LTSSEKTPFLLFLPTKELVTDTYRLATIARDMGMDLYPTPSLSHIIF------SYPSPSS 87
KTP L F+PTKE+V DTYRLAT+ARDMGMDL+PTPSLSHIIF S S S
Sbjct: 61 RNCKPKTPVLFFIPTKEVVQDTYRLATLARDMGMDLHPTPSLSHIIFSCPSFSSSSSSPS 120
Query: 88 SSSSSSSTSPSWHSSMSLSSSLILPHDAVPLTFPSLSTSSLSHLRSFVSLSKGLFKLVFV 147
SS S S S S SSS LP+ AVPL FPSLS + L+HL SFV+LS+GLFK+VFV
Sbjct: 121 PLSSKSLPSSWSWSWSSSSSSWPLPNYAVPLPFPSLSQAPLTHLHSFVTLSRGLFKVVFV 180
Query: 148 TGNSESKVDNSS-SSHWDCCSFSLFSRLNGDRIDSMEAFSRALAGIGWTLFKTKKN---- 202
T +S N +S+WDC S SLFSR++GDRI +ME F RAL G+GW+LFKTKKN
Sbjct: 181 THRGDSNEGNDGRASNWDCSSLSLFSRISGDRIQTMEGFCRALTGVGWSLFKTKKNPSLD 240
Query: 203 SNSR------SVYLFRKVDSGRVRA---NG--------CRIRELRLPALDFKNAPLRILQ 245
S R S YLFRKV+S RVRA NG CR+RELRLP LDF+NAPLRILQ
Sbjct: 241 SGGRRIRGCNSAYLFRKVESNRVRARLGNGDGGEASGECRVRELRLPPLDFRNAPLRILQ 300
Query: 246 YVVLMTDDVFYLA 258
Y++LMTDD+FYLA
Sbjct: 301 YILLMTDDIFYLA 313
>gi|147815904|emb|CAN68197.1| hypothetical protein VITISV_039761 [Vitis vinifera]
Length = 313
Score = 267 bits (683), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 171/313 (54%), Positives = 202/313 (64%), Gaps = 55/313 (17%)
Query: 1 MLPLKLIRSLVLGDTINNN------------------------HLLKQSQTSSQN---NQ 33
MLPL+L+RSLVLGDTINN+ H + SS++ N+
Sbjct: 1 MLPLRLLRSLVLGDTINNHPLHLHHHHHHHDVVDDXEEEEEETHRSVEEFESSRHKPRNR 60
Query: 34 LTSSEKTPFLLFLPTKELVTDTYRLATIARDMGMDLYPTPSLSHIIF------SYPSPSS 87
KTP L F+PTKE+V DTYRLAT+ARDMGMDL+PTPSLSHIIF S S S
Sbjct: 61 RNCKPKTPVLFFIPTKEVVQDTYRLATLARDMGMDLHPTPSLSHIIFSCPSFSSXSSSPS 120
Query: 88 SSSSSSSTSPSWHSSMSLSSSLILPHDAVPLTFPSLSTSSLSHLRSFVSLSKGLFKLVFV 147
SS S S S S SSS LP+ AVPL FPSLS + L+HL SFV+LS+GLFK+VFV
Sbjct: 121 PLSSKSLPSSWSWSWSSSSSSWPLPNYAVPLPFPSLSQAPLTHLHSFVTLSRGLFKVVFV 180
Query: 148 TGNSESKVDNSS-SSHWDCCSFSLFSRLNGDRIDSMEAFSRALAGIGWTLFKTKKN---- 202
T +S N +S+WDC S SLFSR++GDRI +ME F RAL G+GW+LFKTKKN
Sbjct: 181 THRGDSNEGNDGRASNWDCSSLSLFSRISGDRIQTMEGFCRALTGVGWSLFKTKKNPSLD 240
Query: 203 SNSR------SVYLFRKVDSGRVRA---NG--------CRIRELRLPALDFKNAPLRILQ 245
S R S YLFRKV+S RVRA NG CR+RELRLP LDF+NAPLRILQ
Sbjct: 241 SGGRRIRGCNSAYLFRKVESNRVRARLGNGDGGEASGECRVRELRLPPLDFRNAPLRILQ 300
Query: 246 YVVLMTDDVFYLA 258
Y++LMTDD+FYLA
Sbjct: 301 YILLMTDDIFYLA 313
>gi|357464809|ref|XP_003602686.1| hypothetical protein MTR_3g096940 [Medicago truncatula]
gi|355491734|gb|AES72937.1| hypothetical protein MTR_3g096940 [Medicago truncatula]
Length = 273
Score = 259 bits (663), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 154/275 (56%), Positives = 188/275 (68%), Gaps = 19/275 (6%)
Query: 1 MLPLKLIRSLVLGDTINNN-HLLKQSQTSSQNNQLTSSE----KTPFLLFLPTKELVTDT 55
MLPLKL+RSL+LG+TIN N H L + Q E K P LLFLPT+E++T+T
Sbjct: 1 MLPLKLVRSLILGETINQNPHFLNHVNDDDDDKQEQPKETRFKKRPGLLFLPTQEIITNT 60
Query: 56 YRLATIARDMGMDLYPTPSLSHIIFSYPSPSSSSSSSSSTSPSWHSSMSLSSSLILPHDA 115
Y+LATIARD+GM+L+PTPSLSHIIFS PS + S+SSSS ++PS S S+S L + A
Sbjct: 61 YKLATIARDLGMNLHPTPSLSHIIFSNPSSTPSTSSSSPSTPSTSSFSVSSASSSLLNHA 120
Query: 116 VPLTFPSLSTSSLSHLRSFVSLSKGLFKLVFVTGNSESKVDNSSSSHWDCCSFSLFSRLN 175
VP+ FPS ST+ L+HLR FV+L FKLV T + +S D S+WDCCS SL SR+
Sbjct: 121 VPIPFPSFSTTPLTHLRFFVTLFPRAFKLVLFTSDGDS--DAVGVSNWDCCSVSLCSRVT 178
Query: 176 GDRIDSMEAFSRALAGIGWTLFKTKKN-----SNSRSVYLFRKVDSGRVRA-------NG 223
G R+D+ME F R LAG GWT FKTK+N VYLFRKVD RVR
Sbjct: 179 GIRVDTMEGFCRILAGKGWTFFKTKENPSVDHCGGGVVYLFRKVDVNRVRVGRVGAPDGA 238
Query: 224 CRIRELRLPALDFKNAPLRILQYVVLMTDDVFYLA 258
CR+RELRLP LDF+NAPL+ILQY++LMTDDVF LA
Sbjct: 239 CRVRELRLPHLDFENAPLKILQYILLMTDDVFCLA 273
>gi|356518804|ref|XP_003528067.1| PREDICTED: uncharacterized protein LOC100820243 [Glycine max]
Length = 278
Score = 238 bits (606), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 149/288 (51%), Positives = 190/288 (65%), Gaps = 40/288 (13%)
Query: 1 MLPLKLIRSLVLGDTINNN--HLLKQSQ---TSSQNNQLTSSE--------------KTP 41
MLPLKL+RSLVLG+TIN+N H+L Q+ + +N +S+ KTP
Sbjct: 1 MLPLKLVRSLVLGETINHNPHHILTQNHHHNSDDENKTYGTSKPHHHTRRRRRRRKYKTP 60
Query: 42 FLLFLPTKELVTDTYRLATIARDMGMDLYPTPSLSHIIFSYPSPSSSSSSSSSTSPSWHS 101
L+FLPTKE++ DTYRLATIARD+G+DLYPTPSLSHIIFS PS S SS S S+S S
Sbjct: 61 GLIFLPTKEIIRDTYRLATIARDLGLDLYPTPSLSHIIFSNPSSSKPSSLSISSSSSSSC 120
Query: 102 SMSLSSSLILPHDAVPLTFPSLSTSSLSHLRSFVSLSKGLFKLVFVTGNSESKVDNS-SS 160
S+ DAVP+ FPSLS + L+HLR F++LS FK+V NS+ D + ++
Sbjct: 121 SLPS--------DAVPIPFPSLSATPLAHLRCFLTLSPRAFKIVLF--NSDHHPDAAGTA 170
Query: 161 SHWDCCSFSLFSRLNGDRIDSMEAFSRALAGIGWTLFKTKKNSNSR-----SVYLF---- 211
+WDC SFSL+SR+ G R+D+ME F R LAG GW+ +KTKKN +S + YLF
Sbjct: 171 GNWDCGSFSLYSRVVGVRVDTMEEFCRILAGKGWSFYKTKKNPSSDQRRGGAFYLFRRVD 230
Query: 212 -RKVDSGRVRANGCRIRELRLPALDFKNAPLRILQYVVLMTDDVFYLA 258
+V G + CR+RELRLP LDF NAPLRILQY++LMTDD+F LA
Sbjct: 231 VNRVRVGALVDGACRVRELRLPHLDFGNAPLRILQYILLMTDDIFCLA 278
>gi|297810997|ref|XP_002873382.1| hypothetical protein ARALYDRAFT_908857 [Arabidopsis lyrata subsp.
lyrata]
gi|297319219|gb|EFH49641.1| hypothetical protein ARALYDRAFT_908857 [Arabidopsis lyrata subsp.
lyrata]
Length = 296
Score = 236 bits (602), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 167/297 (56%), Positives = 204/297 (68%), Gaps = 40/297 (13%)
Query: 1 MLPLKLIRSLVLGDTINNNH---------------------LLKQSQTSSQNNQLTSSEK 39
MLPLKL RSL+L +T++ H KQS+T S+++ +S K
Sbjct: 1 MLPLKLARSLLLHETLDLTHNPGDTDDGDEDGETSIRQILSSYKQSKTRSRSDNKRNS-K 59
Query: 40 TPFLLFLPTKELVTDTYRLATIARDMGMDLYPTPSLSHIIFSYPSPS-----SSSSSSSS 94
P L F+PT+EL++DTYRLATIARD+GMDLYPTPSLSHIIFS+PS SSSS
Sbjct: 60 IPLLYFVPTRELISDTYRLATIARDLGMDLYPTPSLSHIIFSFPSRESKSPSPFSSSSHP 119
Query: 95 TSPSWHSSMSLSSSLILPHDAVPLTFPSLSTSSLSHLRSFVSLSKGLFKLVF--VTGNSE 152
++ S +S+S S S LP+DAV L+FPSLS SSLSHLRSFVSLS GLFKLVF T +
Sbjct: 120 STWSSSASLSSSLSWSLPNDAVMLSFPSLSASSLSHLRSFVSLSNGLFKLVFSATTVETS 179
Query: 153 SKVDNSSSSHWDCCSFSLFSRLNGDRIDSMEAFSRALAGIGWTLFKTKKN-------SNS 205
S S S+WDCCS SLFSR+ RI SME+FS ALA GWT++KTK+N +
Sbjct: 180 SSSSPGSVSNWDCCSVSLFSRIANKRIGSMESFSNALASKGWTIYKTKENPSPESTSNGG 239
Query: 206 RSVYLFRKVDSGRVRA---NG-CRIRELRLPALDFKNAPLRILQYVVLMTDDVFYLA 258
SVYLFRKV +GR+ A NG CR+RELRLP LDF+NAPLRILQY++LMTDD+F+LA
Sbjct: 240 SSVYLFRKVYTGRIMAREGNGSCRVRELRLPQLDFRNAPLRILQYLMLMTDDIFFLA 296
>gi|22326681|ref|NP_680159.1| uncharacterized protein [Arabidopsis thaliana]
gi|332003965|gb|AED91348.1| uncharacterized protein [Arabidopsis thaliana]
Length = 297
Score = 231 bits (588), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 165/297 (55%), Positives = 202/297 (68%), Gaps = 39/297 (13%)
Query: 1 MLPLKLIRSLVLGDTINNNH---------------------LLKQSQTSSQ-NNQLTSSE 38
MLPLKL RSL+L +T+N H KQS+T S+ +N T +
Sbjct: 1 MLPLKLARSLLLHETLNLTHNSGDTDDVDEDGETSIRQILSSYKQSKTRSRSDNNKTRNS 60
Query: 39 KTPFLLFLPTKELVTDTYRLATIARDMGMDLYPTPSLSHIIF-----SYPSPSSSSSSSS 93
KTP L F+PT+EL++DTYRLATI RD+GMD+YPTPSLSHIIF SPS SSSS
Sbjct: 61 KTPLLYFVPTRELISDTYRLATIGRDLGMDMYPTPSLSHIIFSFPSPESKSPSPFSSSSH 120
Query: 94 STSPSWHSSMSLSSSLILPHDAVPLTFPSLSTSSLSHLRSFVSLSKGLFKLVFVTGNSES 153
++ S +S+S S S LP+DAV L+FPSLS SSLSHLRSFVSLS GLFKLVF E+
Sbjct: 121 PSTWSSSASLSSSLSWSLPNDAVMLSFPSLSASSLSHLRSFVSLSNGLFKLVFSATTVET 180
Query: 154 -KVDNSSSSHWDCCSFSLFSRLNGDRIDSMEAFSRALAGIGWTLFKTKKN-------SNS 205
+ S S+WDCCS SLFS++ RI SME+FS ALA GWT++KTK+N +
Sbjct: 181 SPSSSGSVSNWDCCSVSLFSKIANKRIGSMESFSNALASKGWTIYKTKENPTPESTTNGV 240
Query: 206 RSVYLFRKVDSGRV---RANG-CRIRELRLPALDFKNAPLRILQYVVLMTDDVFYLA 258
SVYLFRKV +GR+ NG CR+RELRLP LDF+NAPLRILQY++LMTDD+F+LA
Sbjct: 241 SSVYLFRKVYTGRIMTREGNGSCRVRELRLPQLDFRNAPLRILQYLMLMTDDIFFLA 297
>gi|356507435|ref|XP_003522472.1| PREDICTED: uncharacterized protein LOC100811971 [Glycine max]
Length = 279
Score = 230 bits (586), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 150/293 (51%), Positives = 188/293 (64%), Gaps = 49/293 (16%)
Query: 1 MLPLKLIRSLVLGDTINNN--HLLKQSQ---------------TSSQNNQLTSSEKTPFL 43
MLPLKL+RSLVLG+TIN+N H+L Q+ + Q+++ K P L
Sbjct: 1 MLPLKLVRSLVLGETINHNPHHILTQNHHHNSDDDDDDEAHGTSQPQHHRRRRKYKRPGL 60
Query: 44 LFLPTKELVTDTYRLATIARDMGMDLYPTPSLSHIIFSYPSPSSSSSSSSSTSPSWHSSM 103
+FLPTKE++ DTYRLATIARD+G+DLYPTPSLSHIIFS PS S SS S S S S S
Sbjct: 61 IFLPTKEIIRDTYRLATIARDLGLDLYPTPSLSHIIFSNPSSSKPSSLSISFSCSLQS-- 118
Query: 104 SLSSSLILPHDAVPLTFPSLSTSSLSHLRSFVSLSKGLFKLVFVTGNSESKVDNSS---- 159
DAVP+ FPSLS + L+HLR F++LS FK+V NS+ D++S
Sbjct: 119 ----------DAVPIPFPSLSATPLAHLRCFLTLSPRAFKIVLF--NSDHHPDDASGTSG 166
Query: 160 -SSHWDCCSFSLFSRLNGDRIDSMEAFSRALAGIGWTLFKTKK--NSNSR---SVYLFRK 213
+++WDC SFSL SR G R+D+ME F R LAG GW+ +KTKK +S+ R + YLFR+
Sbjct: 167 NANNWDCGSFSLHSRAVGVRVDTMEEFCRILAGKGWSFYKTKKAPSSDQRHGGAFYLFRR 226
Query: 214 VDS--------GRVRANGCRIRELRLPALDFKNAPLRILQYVVLMTDDVFYLA 258
VD G CR+RELRLP LDF NAPLRILQY++LMTDD+F LA
Sbjct: 227 VDVNRVRVGGVGAPEDGACRVRELRLPHLDFGNAPLRILQYILLMTDDIFCLA 279
>gi|224286952|gb|ACN41178.1| unknown [Picea sitchensis]
Length = 270
Score = 140 bits (353), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 95/281 (33%), Positives = 144/281 (51%), Gaps = 57/281 (20%)
Query: 1 MLPLKLIRSLVLGDTINNN-----------HLLKQ--SQTSSQNNQLTSSEKTPFLLFLP 47
ML L ++RSLVL D HL KQ N++T + P+L+F+P
Sbjct: 1 MLSLSVVRSLVLRDEAAEQVSSIAHSSSLLHLSKQLPKWRRIHGNKVTRNNSFPYLVFVP 60
Query: 48 TKELVTDTYRLATIARDMGMDLYPTPSLSHIIFSYPSPSSSSSSSSSTSPSWHSSMSLSS 107
T+E++ D RLA IARD+GM+ +I+S+P+ + +
Sbjct: 61 TEEVMKDQLRLAAIARDLGMEFCGDLINFRLIYSWPAIAMAG------------------ 102
Query: 108 SLILPHDAVPLTFPSLSTSSLSHLRSFVSLSKGLFKLVFVTGNSESKVDNSSSSHWDCC- 166
H++V L FP L+ + L L F LS+GLF++ ES S +S D C
Sbjct: 103 -----HESVSLPFPHLTDARLQQLHDFAKLSRGLFRV-------ESLPLRSGNSKRDPCP 150
Query: 167 -SFSLFSRLNGDRIDSMEAFSRALAGIGWTLFKTKKNSNSRSVYLFRKVDSG-RVRANGC 224
SL R++ + ++ M+ F+R +AG GW++FK K +Y++RKVD R++ +G
Sbjct: 151 RRGSLGVRVSKESVEGMDKFTRVMAGAGWSVFKIK---TMEEMYVYRKVDFKLRLQWDGS 207
Query: 225 --------RIRELRLPALDFKNAPLRILQYVVLMTDDVFYL 257
R RELRLP LD +AP+ L+Y++LMTDD+FYL
Sbjct: 208 NPGPSPAFRARELRLPELDLTSAPIETLEYILLMTDDLFYL 248
>gi|116785061|gb|ABK23575.1| unknown [Picea sitchensis]
Length = 288
Score = 129 bits (325), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 98/289 (33%), Positives = 147/289 (50%), Gaps = 57/289 (19%)
Query: 1 MLPLKLIRSLVLGDTINNN-----------HLLKQ-------SQTSSQNNQLTSSEKTPF 42
ML L ++RSLVL D + +L KQ + T++ NN + P+
Sbjct: 1 MLSLSVVRSLVLRDETVEHVNSIAKASSLLYLSKQLPRWRRINGTNACNNTRVDNGGFPY 60
Query: 43 LLFLPTKELVTDTYRLATIARDMGMDLYPTPSLSHIIFSYPSPSSSSSSSSSTSPSWHSS 102
L+F+PT+E++ D R+A IARD+GM+ +I+S+P+ ++
Sbjct: 61 LVFVPTEEVMRDALRVAAIARDIGMEFCGDLINDRLIYSWPALGMAA------------- 107
Query: 103 MSLSSSLILPHDAVPLTFPSLSTSSLSHLRSFVSLSKGLFK-----LVFVTGNSESKVDN 157
H+++ L FP L + L L F +LS+G F+ L NS S +
Sbjct: 108 ----------HESISLPFPRLGDAHLQELNEFANLSRGFFRVENLSLPLPPCNSYSNSHS 157
Query: 158 SSSSHWDCCSFSLFSRLNGDRIDSMEAFSRALAGIGWTLFKTKKNSNSRSVYLFRKVDSG 217
+S + S SL LN + IDSM+ F+R +AG GW++FK K S Y++RKVD
Sbjct: 158 NSRRGRERGSGSLGVTLNKELIDSMDKFTRVMAGAGWSMFKLK--STEEMYYVYRKVDFK 215
Query: 218 -RVRANGC--------RIRELRLPALDFKNAPLRILQYVVLMTDDVFYL 257
R++ +G R RELRLP L+ +AP IL+YV+LMTDD+FYL
Sbjct: 216 LRLQWDGLNPSPAPAFRARELRLPDLNLTSAPTEILEYVLLMTDDLFYL 264
>gi|361066203|gb|AEW07413.1| Pinus taeda anonymous locus 0_775_01 genomic sequence
gi|383136185|gb|AFG49152.1| Pinus taeda anonymous locus 0_775_01 genomic sequence
gi|383136187|gb|AFG49153.1| Pinus taeda anonymous locus 0_775_01 genomic sequence
gi|383136189|gb|AFG49154.1| Pinus taeda anonymous locus 0_775_01 genomic sequence
gi|383136191|gb|AFG49155.1| Pinus taeda anonymous locus 0_775_01 genomic sequence
gi|383136193|gb|AFG49156.1| Pinus taeda anonymous locus 0_775_01 genomic sequence
gi|383136195|gb|AFG49157.1| Pinus taeda anonymous locus 0_775_01 genomic sequence
gi|383136197|gb|AFG49158.1| Pinus taeda anonymous locus 0_775_01 genomic sequence
gi|383136199|gb|AFG49159.1| Pinus taeda anonymous locus 0_775_01 genomic sequence
gi|383136201|gb|AFG49160.1| Pinus taeda anonymous locus 0_775_01 genomic sequence
gi|383136203|gb|AFG49161.1| Pinus taeda anonymous locus 0_775_01 genomic sequence
gi|383136205|gb|AFG49162.1| Pinus taeda anonymous locus 0_775_01 genomic sequence
gi|383136207|gb|AFG49163.1| Pinus taeda anonymous locus 0_775_01 genomic sequence
gi|383136209|gb|AFG49164.1| Pinus taeda anonymous locus 0_775_01 genomic sequence
gi|383136211|gb|AFG49165.1| Pinus taeda anonymous locus 0_775_01 genomic sequence
gi|383136213|gb|AFG49166.1| Pinus taeda anonymous locus 0_775_01 genomic sequence
gi|383136215|gb|AFG49167.1| Pinus taeda anonymous locus 0_775_01 genomic sequence
Length = 153
Score = 97.1 bits (240), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 57/149 (38%), Positives = 87/149 (58%), Gaps = 21/149 (14%)
Query: 120 FPSLSTSSLSHLRSFVSLSKGLFKLVFVTGNSESKVDNSSSSHWDCCS--FSLFSRLNGD 177
FP L+ + + L FV LS+GLF++ ES +S D C SL R++ +
Sbjct: 2 FPHLTDARIQTLHDFVKLSRGLFRV-------ESLPLRPGNSKRDPCPRRGSLGVRVSRE 54
Query: 178 RIDSMEAFSRALAGIGWTLFKTKKNSNSRSVYLFRKVDSG-RVRANGC--------RIRE 228
++ M+ F+R +AG GW++FK K +Y++RK+D R++ +G R RE
Sbjct: 55 PVEGMDKFTRVMAGAGWSVFKIKAMEE---MYVYRKIDFKLRLQWDGSNPGPSPAFRARE 111
Query: 229 LRLPALDFKNAPLRILQYVVLMTDDVFYL 257
LRLP LD +AP+ IL+Y++LMTDD+FYL
Sbjct: 112 LRLPVLDLTSAPIEILEYILLMTDDLFYL 140
>gi|260836455|ref|XP_002613221.1| hypothetical protein BRAFLDRAFT_73157 [Branchiostoma floridae]
gi|229298606|gb|EEN69230.1| hypothetical protein BRAFLDRAFT_73157 [Branchiostoma floridae]
Length = 8372
Score = 37.0 bits (84), Expect = 7.5, Method: Composition-based stats.
Identities = 27/108 (25%), Positives = 50/108 (46%), Gaps = 2/108 (1%)
Query: 102 SMSLSSSLILPHDAVPLTFPSLSTSSLSHLRSFVSLSKGLFKLV--FVTGNSESKVDNSS 159
++S +S+++ H A ++ S TS SH +S +SK L K + VT + + V S
Sbjct: 3258 ALSKQASVVMGHQAANVSLGSQVTSITSHFQSLAIISKDLVKKLDQTVTDHEQLDVSVKS 3317
Query: 160 SSHWDCCSFSLFSRLNGDRIDSMEAFSRALAGIGWTLFKTKKNSNSRS 207
++HW R + + +E + L +G T+ + K + S
Sbjct: 3318 TTHWISQLSQEIQRCKSNTMQPLETRIKTLKDLGTTVKEGKSKLKAAS 3365
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.318 0.130 0.371
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,627,423,345
Number of Sequences: 23463169
Number of extensions: 138870055
Number of successful extensions: 1101562
Number of sequences better than 100.0: 904
Number of HSP's better than 100.0 without gapping: 279
Number of HSP's successfully gapped in prelim test: 625
Number of HSP's that attempted gapping in prelim test: 1050832
Number of HSP's gapped (non-prelim): 31092
length of query: 258
length of database: 8,064,228,071
effective HSP length: 139
effective length of query: 119
effective length of database: 9,097,814,876
effective search space: 1082639970244
effective search space used: 1082639970244
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 75 (33.5 bits)