Query 040285
Match_columns 298
No_of_seqs 109 out of 1102
Neff 9.5
Searched_HMMs 46136
Date Fri Mar 29 06:52:58 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/040285.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/040285hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0156 Cytochrome P450 CYP2 s 100.0 2.1E-47 4.5E-52 351.5 28.8 282 12-297 5-291 (489)
2 PLN02971 tryptophan N-hydroxyl 100.0 4.6E-37 9.9E-42 290.5 29.9 268 30-297 54-332 (543)
3 PLN02687 flavonoid 3'-monooxyg 100.0 7.6E-37 1.7E-41 287.7 29.6 288 8-297 6-302 (517)
4 PLN00110 flavonoid 3',5'-hydro 100.0 2.4E-35 5.2E-40 276.5 29.8 282 14-297 11-294 (504)
5 PLN03234 cytochrome P450 83B1; 100.0 6.7E-35 1.5E-39 273.6 29.3 268 27-297 22-293 (499)
6 PLN03112 cytochrome P450 famil 100.0 1E-34 2.2E-39 273.3 30.2 293 4-297 2-301 (514)
7 PLN02183 ferulate 5-hydroxylas 100.0 4.9E-34 1.1E-38 268.6 28.2 262 28-297 31-309 (516)
8 PLN02655 ent-kaurene oxidase 100.0 2E-33 4.4E-38 261.3 24.7 257 35-297 1-267 (466)
9 PLN00168 Cytochrome P450; Prov 100.0 1E-32 2.2E-37 259.9 29.5 265 30-297 32-311 (519)
10 PLN02966 cytochrome P450 83A1 100.0 1.7E-32 3.7E-37 257.4 28.1 262 32-296 28-293 (502)
11 PLN03018 homomethionine N-hydr 100.0 1.9E-31 4.2E-36 251.1 29.5 265 32-297 39-319 (534)
12 KOG0158 Cytochrome P450 CYP3/C 100.0 6.7E-32 1.4E-36 246.3 22.3 279 7-297 5-299 (499)
13 PLN02290 cytokinin trans-hydro 100.0 8.1E-32 1.8E-36 253.7 23.1 256 31-297 40-321 (516)
14 PTZ00404 cytochrome P450; Prov 100.0 2.3E-31 5E-36 248.7 25.3 246 29-281 25-273 (482)
15 PLN02394 trans-cinnamate 4-mon 100.0 1.4E-30 3E-35 244.6 28.8 282 11-296 8-297 (503)
16 PLN02500 cytochrome P450 90B1 100.0 6.6E-30 1.4E-34 239.3 23.5 244 29-297 34-284 (490)
17 PF00067 p450: Cytochrome P450 100.0 7E-30 1.5E-34 235.3 14.8 258 35-297 1-267 (463)
18 PLN02987 Cytochrome P450, fami 100.0 2.2E-28 4.9E-33 227.3 22.1 263 8-297 5-272 (472)
19 PLN02196 abscisic acid 8'-hydr 100.0 9.3E-28 2E-32 223.2 23.1 238 28-297 30-269 (463)
20 KOG0157 Cytochrome P450 CYP4/C 100.0 4.1E-28 8.9E-33 226.6 20.4 256 31-297 33-296 (497)
21 PLN02302 ent-kaurenoic acid ox 100.0 4.9E-27 1.1E-31 220.0 25.9 248 28-297 37-292 (490)
22 PLN02774 brassinosteroid-6-oxi 100.0 1.4E-27 3E-32 222.1 21.2 242 29-297 27-269 (463)
23 PLN02169 fatty acid (omega-1)- 100.0 3.4E-27 7.4E-32 221.1 22.4 256 33-297 31-306 (500)
24 PLN03195 fatty acid omega-hydr 100.0 7.5E-27 1.6E-31 220.0 22.8 254 34-297 31-297 (516)
25 PLN03141 3-epi-6-deoxocathaste 99.9 8.7E-27 1.9E-31 216.1 19.7 245 29-297 3-256 (452)
26 PLN02936 epsilon-ring hydroxyl 99.9 1.7E-25 3.8E-30 209.3 21.3 255 32-297 11-283 (489)
27 PLN02738 carotene beta-ring hy 99.9 7.5E-24 1.6E-28 202.6 22.8 242 43-297 141-396 (633)
28 KOG0159 Cytochrome P450 CYP11/ 99.9 5.3E-21 1.1E-25 172.2 21.2 226 34-265 51-292 (519)
29 PLN02426 cytochrome P450, fami 99.8 2E-19 4.4E-24 168.7 20.7 230 40-281 48-288 (502)
30 PLN02648 allene oxide synthase 99.8 2.4E-19 5.2E-24 166.5 9.4 162 31-196 15-194 (480)
31 KOG0684 Cytochrome P450 [Secon 99.8 4.1E-17 8.9E-22 144.3 17.9 244 33-296 31-277 (486)
32 COG2124 CypX Cytochrome P450 [ 99.6 1.6E-13 3.5E-18 125.7 17.9 231 35-297 4-241 (411)
33 KOG0114 Predicted RNA-binding 85.2 3.8 8.3E-05 29.6 5.8 62 30-93 9-76 (124)
34 PHA03049 IMV membrane protein; 81.3 3.5 7.5E-05 26.9 3.9 45 3-47 1-45 (68)
35 PF05961 Chordopox_A13L: Chord 77.9 5 0.00011 26.3 3.9 35 3-37 1-35 (68)
36 KOG3653 Transforming growth fa 73.9 8 0.00017 35.9 5.5 38 63-100 221-258 (534)
37 PF00076 RRM_1: RNA recognitio 64.6 25 0.00055 22.4 5.3 55 43-99 2-65 (70)
38 PLN03120 nucleic acid binding 63.3 35 0.00076 29.2 6.9 59 43-103 8-72 (260)
39 smart00362 RRM_2 RNA recogniti 59.1 41 0.0009 21.0 5.9 39 55-93 13-58 (72)
40 PF15102 TMEM154: TMEM154 prot 55.0 10 0.00022 29.2 2.2 10 56-65 128-137 (146)
41 PF13625 Helicase_C_3: Helicas 54.6 29 0.00063 26.1 4.7 38 55-94 77-114 (129)
42 PRK00994 F420-dependent methyl 51.8 66 0.0014 27.2 6.5 117 43-162 36-165 (277)
43 TIGR01661 ELAV_HUD_SF ELAV/HuD 49.7 51 0.0011 29.3 6.3 59 42-102 272-340 (352)
44 PLN03134 glycine-rich RNA-bind 49.1 66 0.0014 24.8 6.0 59 42-102 37-105 (144)
45 PF13893 RRM_5: RNA recognitio 48.1 38 0.00082 20.9 3.8 43 59-101 2-49 (56)
46 PF15050 SCIMP: SCIMP protein 46.3 49 0.0011 24.5 4.4 15 33-47 68-83 (133)
47 COG4459 NapE Periplasmic nitra 45.0 22 0.00048 22.5 2.1 32 6-40 29-61 (62)
48 COG1927 Mtd Coenzyme F420-depe 40.1 1.1E+02 0.0024 25.3 6.0 118 42-162 35-165 (277)
49 PF09061 Stirrup: Stirrup; In 38.8 74 0.0016 20.8 3.9 28 55-83 9-36 (79)
50 PF15048 OSTbeta: Organic solu 38.3 40 0.00086 25.3 3.0 22 5-26 31-55 (125)
51 PF01102 Glycophorin_A: Glycop 37.7 31 0.00067 25.9 2.4 11 21-31 84-94 (122)
52 PF15183 MRAP: Melanocortin-2 36.9 85 0.0018 21.7 4.1 17 6-22 38-54 (90)
53 PF14259 RRM_6: RNA recognitio 36.2 49 0.0011 21.3 3.1 51 43-95 2-60 (70)
54 PF06667 PspB: Phage shock pro 33.2 74 0.0016 21.6 3.4 9 4-12 5-13 (75)
55 PF07095 IgaA: Intracellular g 30.7 69 0.0015 31.3 4.0 43 5-47 226-274 (705)
56 PF08693 SKG6: Transmembrane a 30.1 34 0.00075 20.1 1.3 6 7-12 19-24 (40)
57 COG3763 Uncharacterized protei 28.3 79 0.0017 21.1 2.8 26 1-26 1-26 (71)
58 PF15206 FAM209: FAM209 family 28.1 63 0.0014 24.7 2.6 31 14-44 43-77 (150)
59 smart00360 RRM RNA recognition 27.8 1.5E+02 0.0032 18.1 4.8 39 55-93 10-57 (71)
60 PF07912 ERp29_N: ERp29, N-ter 27.6 2.3E+02 0.005 21.4 5.5 44 59-102 71-126 (126)
61 cd00590 RRM RRM (RNA recogniti 27.2 1.6E+02 0.0034 18.2 5.3 41 55-95 13-61 (74)
62 PF14605 Nup35_RRM_2: Nup53/35 26.3 1.7E+02 0.0036 18.1 4.2 34 57-90 16-52 (53)
63 PF08780 NTase_sub_bind: Nucle 25.2 2E+02 0.0043 21.5 5.0 26 119-144 74-101 (124)
64 PF15269 zf-C2H2_7: Zinc-finge 24.0 66 0.0014 19.3 1.7 16 29-44 5-20 (54)
65 PF09802 Sec66: Preprotein tra 23.2 64 0.0014 26.3 2.1 25 6-30 7-31 (190)
66 PRK02302 hypothetical protein; 22.0 1.9E+02 0.0042 20.3 4.0 32 62-93 23-54 (89)
67 TIGR01659 sex-lethal sex-letha 21.7 2.5E+02 0.0054 25.3 5.8 52 41-94 195-255 (346)
68 TIGR01622 SF-CC1 splicing fact 21.6 3E+02 0.0065 25.5 6.6 60 41-102 91-159 (457)
69 cd00418 GlxRS_core catalytic c 21.6 89 0.0019 26.3 2.7 55 32-92 4-58 (230)
70 PF08114 PMP1_2: ATPase proteo 21.3 66 0.0014 18.9 1.3 19 9-27 13-31 (43)
71 PF10883 DUF2681: Protein of u 21.2 1.3E+02 0.0028 21.1 3.0 11 12-22 10-20 (87)
72 PF03967 PRCH: Photosynthetic 20.9 1.2E+02 0.0025 23.2 2.9 24 1-26 10-33 (136)
73 PRK02886 hypothetical protein; 20.2 2.3E+02 0.0049 19.9 4.0 32 62-93 21-52 (87)
74 TIGR01659 sex-lethal sex-letha 20.1 4E+02 0.0088 23.9 6.8 48 55-102 121-178 (346)
No 1
>KOG0156 consensus Cytochrome P450 CYP2 subfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=2.1e-47 Score=351.52 Aligned_cols=282 Identities=28% Similarity=0.494 Sum_probs=236.8
Q ss_pred HHHHHHHHHHHHHhhccCCCCCCCCCCCCCceecccCCCCCC-chHHHHHHHHHhCCceEEecCCeeEEEecCHHHHHHH
Q 040285 12 FSWILVVALNYFSRGFKSGSRRLPPGPTPYPVIGNLLELGDK-PHKSLAKLAKIHGPIMSLKFGQVTTVVFSSAAMAKEI 90 (298)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~pPgP~~~PilGnl~~l~~~-~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~~~~~~ev 90 (298)
+++++++++.+.+..+.+++.++||||+|||+|||++++... +|+.|.+|+++|||+|++|+|+.|+||++|+++|+|+
T Consensus 5 l~~l~~~~l~~~~~~~~~~~~~lPPGP~~lPiIGnl~~l~~~~~h~~~~~ls~~yGpi~tl~lG~~~~Vviss~~~akE~ 84 (489)
T KOG0156|consen 5 LILLLLLLLLSLFFKKYRKRRNLPPGPPPLPIIGNLHQLGSLPPHRSFRKLSKKYGPVFTLRLGSVPVVVISSYEAAKEV 84 (489)
T ss_pred HHHHHHHHHHHHHHHhccCCCCCCcCCCCCCccccHHHcCCCchhHHHHHHHHHhCCeEEEEecCceEEEECCHHHHHHH
Confidence 333444444444444444447899999999999999999765 9999999999999999999999999999999999999
Q ss_pred HHhCCccccccCcc-ccccccccCCCCcccCCCChhHHHHHHHHHhhcCChhHHhHhHHHHHHHHHHHHHHHHHHhhCCc
Q 040285 91 LQNQDTSFCNRTIP-DAIYAHGHHEFGMPWLPVATLWRNLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGT 169 (298)
Q Consensus 91 L~~~~~~f~~Rp~~-~~~~~~~~~~~~~~~~~~g~~Wk~~Rr~l~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~ 169 (298)
|++++..|++||.. ...+.+.+++.|++++++|+.||.+||++.+.+|+.+.++++.....+|++.+++.+.+ .+.++
T Consensus 85 l~~~d~~fa~Rp~~~~~~~~~~~~~~~i~~a~yG~~Wr~~Rr~~~~~L~~~~~~~~~~~~R~~E~~~l~~~l~~-~~~~~ 163 (489)
T KOG0156|consen 85 LVKQDLEFADRPDPTATLKYLSYGGKGIVFAPYGDYWREMRRFALTELRSFGRGKSFMEIREEEVDELVKKLSK-SKKGE 163 (489)
T ss_pred HHhCCccccCCCCchhhHHHhcCCCCceEeCCCcHHHHHHHHHHHHHhcChhhhhhhHHHHHHHHHHHHHHHHh-cCCCc
Confidence 99999999999972 24466666778999999999999999999999999999999999999999999999987 32337
Q ss_pred ceehHHHHHHHHHHHHHHHHhccCCCCCCchhHHHHHHHHHHHHHHhCCCCcccccc-ccccCC-cccHHHHHHHHHHHH
Q 040285 170 AIHIGQAAFDTTLNLISNTIFSIDLADPTSKTAREFKQTNWGMMEEAGKPNLSDFFP-VLENLD-LQGIRRRMTVYFGKM 247 (298)
Q Consensus 170 ~vd~~~~~~~~t~~ii~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P-~l~~l~-~~~~~~~~~~~~~~~ 247 (298)
++|+...+..+++||||+++||.+++.++++...++.+.+.+.+...+...+.|++| ++.+++ ..+..++......++
T Consensus 164 ~vdl~~~l~~~~~nvI~~~~fG~rf~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~p~~l~~~~~~~g~~~~~~~~~~~~ 243 (489)
T KOG0156|consen 164 PVDLSELLDLLVGNVICRMLFGRRFEEEDEEEFLELKELVEESLELLGSFNLSDYFPFLLRWLDGISGLEKRLKKVSKRL 243 (489)
T ss_pred eeeHHHHHHHHHHHHHHHHHhCCccccCCchHHHHHHHHHHHHHHHhCCccHHHHhhHHHHhcccccHHHHHHHHHHHHH
Confidence 999999999999999999999999987644466779999999999999888899999 677776 335666777777779
Q ss_pred HHHHHHHHHHHHHhhhcCCCCCCCCHHHHHhhccccCCCC-CCHHhhhhhc
Q 040285 248 LDVFDRLIDQRLKQRQERDFTESKDMLDALLKICEDKSVE-IDINDIKHLF 297 (298)
Q Consensus 248 ~~~~~~~i~~~~~~~~~~~~~~~~d~l~~lL~~~~~~~~~-lt~~~i~~~~ 297 (298)
.++++++|++|+++.++ + .++||+|.||+..++++.. +|+++|.+++
T Consensus 244 ~~~~~~~i~eh~~~~~~-~--~~~D~vD~lL~~~~~~~~~~~t~~~i~~~~ 291 (489)
T KOG0156|consen 244 DEFLERIIDEHREKIGD-E--EGRDFVDALLKLMKEEKAEGLTDDHLKALI 291 (489)
T ss_pred HHHHHHHHHHHHhhhcc-C--CCCcHHHHHHHhhcccccCCCCHHHHHHHH
Confidence 99999999999987622 2 2379999999987653333 9999999876
No 2
>PLN02971 tryptophan N-hydroxylase
Probab=100.00 E-value=4.6e-37 Score=290.53 Aligned_cols=268 Identities=21% Similarity=0.309 Sum_probs=198.9
Q ss_pred CCCCCCCCCCCCceecccCCCC-CC-chHHHHHHHHHhC-CceEEecCCeeEEEecCHHHHHHHHHhCCccccccCcccc
Q 040285 30 GSRRLPPGPTPYPVIGNLLELG-DK-PHKSLAKLAKIHG-PIMSLKFGQVTTVVFSSAAMAKEILQNQDTSFCNRTIPDA 106 (298)
Q Consensus 30 ~~~~~pPgP~~~PilGnl~~l~-~~-~~~~~~~~~~~yG-~i~~~~~g~~~~vvv~~~~~~~evL~~~~~~f~~Rp~~~~ 106 (298)
++.++||||+|+|++||++++. +. .+..+.+|+++|| ++|++++|+.++||++||++++|+|++++..|++||....
T Consensus 54 r~~~lPPGP~~lPiiGnl~~l~~~~~~~~~l~~~~~~yg~~i~~~~~G~~~~vvv~dpe~ikevl~~~~~~f~~rp~~~~ 133 (543)
T PLN02971 54 KLHPLPPGPTGFPIVGMIPAMLKNRPVFRWLHSLMKELNTEIACVRLGNTHVIPVTCPKIAREIFKQQDALFASRPLTYA 133 (543)
T ss_pred CCCCCCcCCCCCCcccchHHhccCCcHhHHHHHHHHHhCCceEEEEcCCcceEEECCHHHHHHHHHhcchhhcCCCcccc
Confidence 3457899999999999998874 33 3678999999999 8999999999999999999999999999999999986444
Q ss_pred ccccccCCCCcccCCCChhHHHHHHHHHhhcCChhHHhHhHHHHHHHHHHHHHHHHHHhhCCcceehHHHHHHHHHHHHH
Q 040285 107 IYAHGHHEFGMPWLPVATLWRNLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGTAIHIGQAAFDTTLNLIS 186 (298)
Q Consensus 107 ~~~~~~~~~~~~~~~~g~~Wk~~Rr~l~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~t~~ii~ 186 (298)
...++.+..++++..+|+.||++||+++++++++..++.+.+.++++++.+++.+.+.+.+|+++|+.+++.++|+|+|+
T Consensus 134 ~~~l~~~~~~~l~~~~G~~Wk~~Rk~l~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~t~~vi~ 213 (543)
T PLN02971 134 QKILSNGYKTCVITPFGEQFKKMRKVIMTEIVCPARHRWLHDNRAEETDHLTAWLYNMVKNSEPVDLRFVTRHYCGNAIK 213 (543)
T ss_pred hhhccCCCCceEecCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceehHHHHHHHHHHHHH
Confidence 34343322345677889999999999976778877777889999999999999887654446689999999999999999
Q ss_pred HHHhccCCCCCC----chhHHHHHHHHHHHHHHhC---CCCccccccccccCCcccHHHHHHHHHHHHHHHHHHHHHHHH
Q 040285 187 NTIFSIDLADPT----SKTAREFKQTNWGMMEEAG---KPNLSDFFPVLENLDLQGIRRRMTVYFGKMLDVFDRLIDQRL 259 (298)
Q Consensus 187 ~~~fG~~~~~~~----~~~~~~~~~~~~~~~~~~~---~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 259 (298)
+++||.++.... +....++.+.+++.+.... ...+.+++|+++++++.+.+++..+..+.+.+++.++|++++
T Consensus 214 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 293 (543)
T PLN02971 214 RLMFGTRTFSEKTEPDGGPTLEDIEHMDAMFEGLGFTFAFCISDYLPMLTGLDLNGHEKIMRESSAIMDKYHDPIIDERI 293 (543)
T ss_pred HHHhCCcccccccccccchhHHHHHHHHHHHHHHHhccCCcHHHhCCchhhhcccchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999874321 1111223333444433221 123456788777664434455566667788999999999887
Q ss_pred HhhhcCCCCCCCCHHHHHhhccccCCC-CCCHHhhhhhc
Q 040285 260 KQRQERDFTESKDMLDALLKICEDKSV-EIDINDIKHLF 297 (298)
Q Consensus 260 ~~~~~~~~~~~~d~l~~lL~~~~~~~~-~lt~~~i~~~~ 297 (298)
+..+++....+.||++.||+..++++. .+++++|.+.+
T Consensus 294 ~~~~~~~~~~~~d~l~~ll~~~~~~~~~~ls~~~i~~~~ 332 (543)
T PLN02971 294 KMWREGKRTQIEDFLDIFISIKDEAGQPLLTADEIKPTI 332 (543)
T ss_pred HHHhccCCCCCcCHHHHHHhhhcccCCCCCCHHHHHHhH
Confidence 654332210236999999986543332 49999998765
No 3
>PLN02687 flavonoid 3'-monooxygenase
Probab=100.00 E-value=7.6e-37 Score=287.69 Aligned_cols=288 Identities=32% Similarity=0.493 Sum_probs=217.2
Q ss_pred HHHHHHHHHHHHHHHHHhh---ccCCCCCCCCCCCCCceecccCCCCCCchHHHHHHHHHhCCceEEecCCeeEEEecCH
Q 040285 8 PWLLFSWILVVALNYFSRG---FKSGSRRLPPGPTPYPVIGNLLELGDKPHKSLAKLAKIHGPIMSLKFGQVTTVVFSSA 84 (298)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~pPgP~~~PilGnl~~l~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~~ 84 (298)
|.++.+++++++..|+++. .+.+..+.||||+++|++||++++..+++..+.+|+++||++|++++|+.++|+++||
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pPgp~~~P~iG~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~p 85 (517)
T PLN02687 6 PLLLGTVAVSVLVWCLLLRRGGSGKHKRPLPPGPRGWPVLGNLPQLGPKPHHTMAALAKTYGPLFRLRFGFVDVVVAASA 85 (517)
T ss_pred hHHHHHHHHHHHHHHHHhccccCCCCCCCCCccCCCCCccccHHhcCCchhHHHHHHHHHhCCeeEEecCCceEEEeCCH
Confidence 4444444444444443333 2233446799999999999998887778999999999999999999999999999999
Q ss_pred HHHHHHHHhCCccccccCccccccccccCCCCcccCCCChhHHHHHHHHHhhcCChhHHhHhHHHHHHHHHHHHHHHHHH
Q 040285 85 AMAKEILQNQDTSFCNRTIPDAIYAHGHHEFGMPWLPVATLWRNLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQEN 164 (298)
Q Consensus 85 ~~~~evL~~~~~~f~~Rp~~~~~~~~~~~~~~~~~~~~g~~Wk~~Rr~l~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~ 164 (298)
++++++|+++...|++||.......+.+.+.++++..+|+.||++||++.+++|+.++++.+.+.++++++.+++.|++.
T Consensus 86 ~~~~~il~~~~~~f~~r~~~~~~~~~~~~~~~~l~~~~g~~Wk~~Rr~l~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~ 165 (517)
T PLN02687 86 SVAAQFLRTHDANFSNRPPNSGAEHMAYNYQDLVFAPYGPRWRALRKICAVHLFSAKALDDFRHVREEEVALLVRELARQ 165 (517)
T ss_pred HHHHHHHHhcchhhhcCCCccchhhhccCCceeEeCCCCHHHHHHHHHHHHHhCCHHHHHHhHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999865544444332335567778999999999995488999999999999999999999999864
Q ss_pred hhCCcceehHHHHHHHHHHHHHHHHhccCCCCCC-chhHHHHHHHHHHHHHHhCCCCccccccccccCCcccHHHHHHHH
Q 040285 165 CRAGTAIHIGQAAFDTTLNLISNTIFSIDLADPT-SKTAREFKQTNWGMMEEAGKPNLSDFFPVLENLDLQGIRRRMTVY 243 (298)
Q Consensus 165 ~~~~~~vd~~~~~~~~t~~ii~~~~fG~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~ 243 (298)
. +++++|+.+.+..+|+|+|+.++||.++...+ +.....+.+.+...+...+...+.+++|++.|++..+..++..+.
T Consensus 166 ~-~~~~vd~~~~~~~~t~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~ 244 (517)
T PLN02687 166 H-GTAPVNLGQLVNVCTTNALGRAMVGRRVFAGDGDEKAREFKEMVVELMQLAGVFNVGDFVPALRWLDLQGVVGKMKRL 244 (517)
T ss_pred c-CCCceeHHHHHHHHHHHHHHHHHhCccccccCCcchHHHHHHHHHHHHHHhccCcHHHHhhhHHHhCcccHHHHHHHH
Confidence 3 46789999999999999999999999875321 224456777777776654433344577876666433334566667
Q ss_pred HHHHHHHHHHHHHHHHHhhhcCCCCCCCCHHHHHhhcccc-----CCCCCCHHhhhhhc
Q 040285 244 FGKMLDVFDRLIDQRLKQRQERDFTESKDMLDALLKICED-----KSVEIDINDIKHLF 297 (298)
Q Consensus 244 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~l~~lL~~~~~-----~~~~lt~~~i~~~~ 297 (298)
.+.+++++.++|+++++..+.++. ...|+++.|++..++ ++..+|+++|.+.+
T Consensus 245 ~~~~~~~~~~~i~~r~~~~~~~~~-~~~d~l~~ll~~~~~~~~~~~~~~l~~~~i~~~~ 302 (517)
T PLN02687 245 HRRFDAMMNGIIEEHKAAGQTGSE-EHKDLLSTLLALKREQQADGEGGRITDTEIKALL 302 (517)
T ss_pred HHHHHHHHHHHHHHHHHhccccCc-ccccHHHHHHHhhccccccccccCCCHHHHHHHH
Confidence 788889999999988865432211 246999999987543 12359999888754
No 4
>PLN00110 flavonoid 3',5'-hydroxylase (F3'5'H); Provisional
Probab=100.00 E-value=2.4e-35 Score=276.48 Aligned_cols=282 Identities=29% Similarity=0.475 Sum_probs=214.8
Q ss_pred HHHHHHHHHHHhh-ccCCCCCCCCCCCCCceecccCCCCCCchHHHHHHHHHhCCceEEecCCeeEEEecCHHHHHHHHH
Q 040285 14 WILVVALNYFSRG-FKSGSRRLPPGPTPYPVIGNLLELGDKPHKSLAKLAKIHGPIMSLKFGQVTTVVFSSAAMAKEILQ 92 (298)
Q Consensus 14 ~~~~~~~~~~~~~-~~~~~~~~pPgP~~~PilGnl~~l~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~~~~~~evL~ 92 (298)
.++.++..|+++. ...++.+.||||+++|++||++++...++..+.+|+++||++|++++|+.++|+++||++++++|+
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~pPgp~~~Pl~G~l~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dpe~~~~vl~ 90 (504)
T PLN00110 11 TLLFFITRFFIRSLLPKPSRKLPPGPRGWPLLGALPLLGNMPHVALAKMAKRYGPVMFLKMGTNSMVVASTPEAARAFLK 90 (504)
T ss_pred HHHHHHHHHHHHHHhhcccCCCcccCCCCCeeechhhcCCchHHHHHHHHHHhCCeEEEEcCCccEEEECCHHHHHHHHH
Confidence 3445555666665 344556789999999999999888666889999999999999999999999999999999999999
Q ss_pred hCCccccccCccccccccccCCCCcccCCCChhHHHHHHHHHhhcCChhHHhHhHHHHHHHHHHHHHHHHHHhhCCccee
Q 040285 93 NQDTSFCNRTIPDAIYAHGHHEFGMPWLPVATLWRNLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGTAIH 172 (298)
Q Consensus 93 ~~~~~f~~Rp~~~~~~~~~~~~~~~~~~~~g~~Wk~~Rr~l~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vd 172 (298)
++...|++||..........+..+.++..+|+.||++||++..+.|+.+.++.+.+.+.++++.+++.+.+...+|+++|
T Consensus 91 ~~~~~f~~r~~~~~~~~~~~~~~~~l~~~~g~~w~~~Rr~~~~~~f~~~~l~~~~~~i~~~~~~~~~~l~~~~~~g~~~~ 170 (504)
T PLN00110 91 TLDINFSNRPPNAGATHLAYGAQDMVFADYGPRWKLLRKLSNLHMLGGKALEDWSQVRTVELGHMLRAMLELSQRGEPVV 170 (504)
T ss_pred hcchhhcCCCCccchhhhccCCCceeeCCCCHHHHHHHHHHHHHhCCHHHHHHhhHHHHHHHHHHHHHHHHhccCCCcEe
Confidence 99999999986443322212223445677899999999999546799999999999999999999999977544577999
Q ss_pred hHHHHHHHHHHHHHHHHhccCCCCCCchhHHHHHHHHHHHHHHhCCCCccccccccccCCcccHHHHHHHHHHHHHHHHH
Q 040285 173 IGQAAFDTTLNLISNTIFSIDLADPTSKTAREFKQTNWGMMEEAGKPNLSDFFPVLENLDLQGIRRRMTVYFGKMLDVFD 252 (298)
Q Consensus 173 ~~~~~~~~t~~ii~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~ 252 (298)
+.+.+..+++|+|+.++||.++....+.+.+++.+.+.+.+...+...+.+++|++.|++..+..++..+..+.+.+++.
T Consensus 171 ~~~~~~~~~~~vi~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~ 250 (504)
T PLN00110 171 VPEMLTFSMANMIGQVILSRRVFETKGSESNEFKDMVVELMTTAGYFNIGDFIPSIAWMDIQGIERGMKHLHKKFDKLLT 250 (504)
T ss_pred HHHHHHHHHHHHHHHHHhCCcccccCchhHHHHHHHHHHHHHHhccccHHHHcchHhhhCcchHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999873221223456777777776654443444677876665443444556667778888888
Q ss_pred HHHHHHHHhhhcCCCCCCCCHHHHHhhcccc-CCCCCCHHhhhhhc
Q 040285 253 RLIDQRLKQRQERDFTESKDMLDALLKICED-KSVEIDINDIKHLF 297 (298)
Q Consensus 253 ~~i~~~~~~~~~~~~~~~~d~l~~lL~~~~~-~~~~lt~~~i~~~~ 297 (298)
++++++++.....+ .+.|+++.|+++.++ ++..+++++|.+.+
T Consensus 251 ~~i~~~~~~~~~~~--~~~d~l~~ll~~~~~~~~~~l~~~~i~~~~ 294 (504)
T PLN00110 251 RMIEEHTASAHERK--GNPDFLDVVMANQENSTGEKLTLTNIKALL 294 (504)
T ss_pred HHHHHHHhhccccc--cCCChhhHHhhcccccCCCCCCHHHHHHHH
Confidence 99988876443222 236999999976533 23469999988764
No 5
>PLN03234 cytochrome P450 83B1; Provisional
Probab=100.00 E-value=6.7e-35 Score=273.59 Aligned_cols=268 Identities=24% Similarity=0.442 Sum_probs=207.3
Q ss_pred ccCCCCCCCCCCCCCceecccCCCC-CCchHHHHHHHHHhCCceEEecCCeeEEEecCHHHHHHHHHhCCccccccCccc
Q 040285 27 FKSGSRRLPPGPTPYPVIGNLLELG-DKPHKSLAKLAKIHGPIMSLKFGQVTTVVFSSAAMAKEILQNQDTSFCNRTIPD 105 (298)
Q Consensus 27 ~~~~~~~~pPgP~~~PilGnl~~l~-~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~~~~~~evL~~~~~~f~~Rp~~~ 105 (298)
...++.+.||||+++|++||++++. .+++..+.+|+++||++|++++|+.++|+++||++++++|.+++..|.+||...
T Consensus 22 ~~~~~~~~pPgp~~~P~iG~~~~~~~~~~~~~~~~~~~~yG~~~~~~lg~~~~vvv~dpe~~~~il~~~~~~f~~r~~~~ 101 (499)
T PLN03234 22 TTKKSLRLPPGPKGLPIIGNLHQMEKFNPQHFLFRLSKLYGPIFTMKIGGRRLAVISSAELAKELLKTQDLNFTARPLLK 101 (499)
T ss_pred hcCCCCCCCcCCCCCCeeccHHhcCCCCccHHHHHHHHHcCCeEEEEecCcCEEEECCHHHHHHHHHhCCccccCCCCch
Confidence 4445567899999999999999885 468889999999999999999999999999999999999999998999998543
Q ss_pred cccccccCCCCcccCCCChhHHHHHHHHHhhcCChhHHhHhHHHHHHHHHHHHHHHHHHhhCCcceehHHHHHHHHHHHH
Q 040285 106 AIYAHGHHEFGMPWLPVATLWRNLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGTAIHIGQAAFDTTLNLI 185 (298)
Q Consensus 106 ~~~~~~~~~~~~~~~~~g~~Wk~~Rr~l~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~t~~ii 185 (298)
....+.+.+.++++..+|+.|+++||.+.+++|++++++.+.+.++++++.+++.|.+.++.++++|+.+.+..+|+|++
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~w~~~Rr~l~~~~f~~~~l~~~~~~i~~~~~~ll~~l~~~~~~~~~vd~~~~~~~~t~dvi 181 (499)
T PLN03234 102 GQQTMSYQGRELGFGQYTAYYREMRKMCMVNLFSPNRVASFRPVREEECQRMMDKIYKAADQSGTVDLSELLLSFTNCVV 181 (499)
T ss_pred hhhhhccCCCccccCCCcHHHHHHHHHHHHHhcCHHHHHHhHHHHHHHHHHHHHHHHHhccCCCeEEHHHHHHHHHHHHH
Confidence 33322222233445667899999999865789999999999999999999999999866545678999999999999999
Q ss_pred HHHHhccCCCCCCchhHHHHHHHHHHHHHHhCCCCccccccccccCC-cccHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 040285 186 SNTIFSIDLADPTSKTAREFKQTNWGMMEEAGKPNLSDFFPVLENLD-LQGIRRRMTVYFGKMLDVFDRLIDQRLKQRQE 264 (298)
Q Consensus 186 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 264 (298)
+.++||.+++... .+..++.+.+.+.+...+...+.+.+|++.+++ +.+..++..+..+.+++++.++|+++++...+
T Consensus 182 ~~~~fG~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 260 (499)
T PLN03234 182 CRQAFGKRYNEYG-TEMKRFIDILYETQALLGTLFFSDLFPYFGFLDNLTGLSARLKKAFKELDTYLQELLDETLDPNRP 260 (499)
T ss_pred HHHHhCCcccccc-hhHHHHHHHHHHHHHHcCCCcHHHHhhHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 9999999987542 245667776666655444333444667654443 33445677788889999999999987654322
Q ss_pred CCCCCCCCHHHHHhhccccCC--CCCCHHhhhhhc
Q 040285 265 RDFTESKDMLDALLKICEDKS--VEIDINDIKHLF 297 (298)
Q Consensus 265 ~~~~~~~d~l~~lL~~~~~~~--~~lt~~~i~~~~ 297 (298)
+. +++|+++.|++..++++ ..+++++|.+.+
T Consensus 261 ~~--~~~d~l~~l~~~~~~~~~~~~~~~~~i~~~~ 293 (499)
T PLN03234 261 KQ--ETESFIDLLMQIYKDQPFSIKFTHENVKAMI 293 (499)
T ss_pred CC--CcccHHHHHHHHhhccCcCCCCCHHHHHHHH
Confidence 22 24799999997654322 359999998754
No 6
>PLN03112 cytochrome P450 family protein; Provisional
Probab=100.00 E-value=1e-34 Score=273.26 Aligned_cols=293 Identities=26% Similarity=0.448 Sum_probs=216.6
Q ss_pred ccchHHHHHHHHHHHHHHH-HHhhccCCCCCCCCCCCCCceecccCCCCCCchHHHHHHHHHhCCceEEecCCeeEEEec
Q 040285 4 VSCVPWLLFSWILVVALNY-FSRGFKSGSRRLPPGPTPYPVIGNLLELGDKPHKSLAKLAKIHGPIMSLKFGQVTTVVFS 82 (298)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~pPgP~~~PilGnl~~l~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~ 82 (298)
++....+++++++.+.+++ +++.+..+..+.||||+++|++||++++..+++..+.+|+++||++|++++|+.++|+++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ppgp~~~pl~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~g~~~~v~v~ 81 (514)
T PLN03112 2 DSFLLSLLFSVLIFNVLIWRWLNASMRKSLRLPPGPPRWPIVGNLLQLGPLPHRDLASLCKKYGPLVYLRLGSVDAITTD 81 (514)
T ss_pred chhHHHHHHHHHHHHHHHHHHccccccCCCCCccCCCCCCeeeeHHhcCCchHHHHHHHHHHhCCeEEEEecCccEEEEC
Confidence 3444444554444444444 333355566688999999999999988877789999999999999999999999999999
Q ss_pred CHHHHHHHHHhCCccccccCccccccccccCCCCcccCCCChhHHHHHHHHHhhcCChhHHhHhHHHHHHHHHHHHHHHH
Q 040285 83 SAAMAKEILQNQDTSFCNRTIPDAIYAHGHHEFGMPWLPVATLWRNLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQ 162 (298)
Q Consensus 83 ~~~~~~evL~~~~~~f~~Rp~~~~~~~~~~~~~~~~~~~~g~~Wk~~Rr~l~~~~f~~~~l~~~~~~~~~~~~~l~~~l~ 162 (298)
||++++++|++++..|++||.........++..+.++..+|+.|+++||++.+++|+.++++.+.+.+.++++.+++.+.
T Consensus 82 dpe~~~~vl~~~~~~f~~~~~~~~~~~~~~g~~~~~~~~~g~~wk~~Rr~~~~~~f~~~~l~~~~~~~~~~~~~lv~~l~ 161 (514)
T PLN03112 82 DPELIREILLRQDDVFASRPRTLAAVHLAYGCGDVALAPLGPHWKRMRRICMEHLLTTKRLESFAKHRAEEARHLIQDVW 161 (514)
T ss_pred CHHHHHHHHHhCCcccccCCCcccceeeccCCCceEeCCCCHHHHHHHHHHHHHhcCHHHHHHhhHHHHHHHHHHHHHHH
Confidence 99999999999999999987543322221222233566789999999999767789999999999999999999999877
Q ss_pred HHhhCCcceehHHHHHHHHHHHHHHHHhccCCCCCCc---hhHHHHHHHHHHHHHHhCCCCccccccccccCCcccHHHH
Q 040285 163 ENCRAGTAIHIGQAAFDTTLNLISNTIFSIDLADPTS---KTAREFKQTNWGMMEEAGKPNLSDFFPVLENLDLQGIRRR 239 (298)
Q Consensus 163 ~~~~~~~~vd~~~~~~~~t~~ii~~~~fG~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~ 239 (298)
+...+|+++|+.+.+.++++++++.++||.++....+ .+..++.+++...+...+.....+++|++.+++..+..++
T Consensus 162 ~~~~~~~~vd~~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 241 (514)
T PLN03112 162 EAAQTGKPVNLREVLGAFSMNNVTRMLLGKQYFGAESAGPKEAMEFMHITHELFRLLGVIYLGDYLPAWRWLDPYGCEKK 241 (514)
T ss_pred HhhccCCeeeHHHHHHHHHHHHHHHHHcCCccccccccchHHHHHHHHHHHHHHHHcCCCcHHHhChHHHhcCcccHHHH
Confidence 5443467899999999999999999999998743211 2345677777666654433234456777666532233456
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcC--CCCCCCCHHHHHhhccccCCC-CCCHHhhhhhc
Q 040285 240 MTVYFGKMLDVFDRLIDQRLKQRQER--DFTESKDMLDALLKICEDKSV-EIDINDIKHLF 297 (298)
Q Consensus 240 ~~~~~~~~~~~~~~~i~~~~~~~~~~--~~~~~~d~l~~lL~~~~~~~~-~lt~~~i~~~~ 297 (298)
..+..+.+.+++.+++++++++.+.. +. ...|+++.|+++.++++. .+++++|.+.+
T Consensus 242 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~-~~~d~l~~ll~~~~~~~~~~l~~~~i~~~~ 301 (514)
T PLN03112 242 MREVEKRVDEFHDKIIDEHRRARSGKLPGG-KDMDFVDVLLSLPGENGKEHMDDVEIKALM 301 (514)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcccccCC-ccchHHHHHHHhhccccccCCCHHHHHHHH
Confidence 67778888999999999887654321 11 236999999986544332 59999988754
No 7
>PLN02183 ferulate 5-hydroxylase
Probab=100.00 E-value=4.9e-34 Score=268.63 Aligned_cols=262 Identities=27% Similarity=0.481 Sum_probs=198.1
Q ss_pred cCCCCCCCCCCCCCceecccCCCCCCchHHHHHHHHHhCCceEEecCCeeEEEecCHHHHHHHHHhCCccccccCccccc
Q 040285 28 KSGSRRLPPGPTPYPVIGNLLELGDKPHKSLAKLAKIHGPIMSLKFGQVTTVVFSSAAMAKEILQNQDTSFCNRTIPDAI 107 (298)
Q Consensus 28 ~~~~~~~pPgP~~~PilGnl~~l~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~~~~~~evL~~~~~~f~~Rp~~~~~ 107 (298)
..++.+.||||+++|++||++++...++..+.+|+++||++|++++|+.++|+++||++++|+|++++..|++||.....
T Consensus 31 ~~~~~~~ppgp~~~Pl~G~l~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~f~~r~~~~~~ 110 (516)
T PLN02183 31 LRRRLPYPPGPKGLPIIGNMLMMDQLTHRGLANLAKQYGGLFHMRMGYLHMVAVSSPEVARQVLQVQDSVFSNRPANIAI 110 (516)
T ss_pred ccCCCCCCcCCCCCCeeccHHhcCCcchHHHHHHHHHhCCeeEEEeCCcceEEeCCHHHHHHHHHhhhhhhcCCCcccch
Confidence 33345689999999999999887655778899999999999999999999999999999999999999999999764433
Q ss_pred cccccCCCCcccCCCChhHHHHHHHHHhhcCChhHHhHhHHHHHHHHHHHHHHHHHHhhCCcceehHHHHHHHHHHHHHH
Q 040285 108 YAHGHHEFGMPWLPVATLWRNLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGTAIHIGQAAFDTTLNLISN 187 (298)
Q Consensus 108 ~~~~~~~~~~~~~~~g~~Wk~~Rr~l~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~t~~ii~~ 187 (298)
..+..+..+.++..+|+.|+++||++.+++|+.+.++.+.+++ ++++.+++.|.+. .|+++|+.+.+.++++|++++
T Consensus 111 ~~~~~~~~~~l~~~~g~~w~~~Rr~~~~~~f~~~~l~~~~~~~-~~~~~~~~~l~~~--~~~~v~~~~~~~~~~~~vi~~ 187 (516)
T PLN02183 111 SYLTYDRADMAFAHYGPFWRQMRKLCVMKLFSRKRAESWASVR-DEVDSMVRSVSSN--IGKPVNIGELIFTLTRNITYR 187 (516)
T ss_pred hccccCCCceEeCCCChHHHHHHHHHHHHhcCHHHHHHHHHHH-HHHHHHHHHHHhc--CCCcEeHHHHHHHHHHHHHHh
Confidence 3332222344577889999999999657899999998888864 6889999998642 467899999999999999999
Q ss_pred HHhccCCCCCCchhHHHHHHHHHHHHHHhCCCCccccccccccCCcccHHHHHHHHHHHHHHHHHHHHHHHHHhhhcC--
Q 040285 188 TIFSIDLADPTSKTAREFKQTNWGMMEEAGKPNLSDFFPVLENLDLQGIRRRMTVYFGKMLDVFDRLIDQRLKQRQER-- 265 (298)
Q Consensus 188 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-- 265 (298)
++||.+++.. .+++.+.+..+..........+++|++.+++..+..++..+..+.+++++.++|++++++...+
T Consensus 188 ~~fG~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 263 (516)
T PLN02183 188 AAFGSSSNEG----QDEFIKILQEFSKLFGAFNVADFIPWLGWIDPQGLNKRLVKARKSLDGFIDDIIDDHIQKRKNQNA 263 (516)
T ss_pred HhhcCcccch----HHHHHHHHHHHHHHhCCccHHHhcchhHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHhhccccc
Confidence 9999877542 2456666666655444333445777766653223355677778889999999998886543221
Q ss_pred ----CCCCCCCHHHHHhhccccC-----------CCCCCHHhhhhhc
Q 040285 266 ----DFTESKDMLDALLKICEDK-----------SVEIDINDIKHLF 297 (298)
Q Consensus 266 ----~~~~~~d~l~~lL~~~~~~-----------~~~lt~~~i~~~~ 297 (298)
+. .++|+++.||++.+++ +..+++++|.+.+
T Consensus 264 ~~~~~~-~~~d~l~~ll~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~ 309 (516)
T PLN02183 264 DNDSEE-AETDMVDDLLAFYSEEAKVNESDDLQNSIKLTRDNIKAII 309 (516)
T ss_pred cccccc-ccccHHHHHHHhhhccccccccccccccCCCCHHHHHHHH
Confidence 11 2369999999854321 1248999987653
No 8
>PLN02655 ent-kaurene oxidase
Probab=100.00 E-value=2e-33 Score=261.32 Aligned_cols=257 Identities=21% Similarity=0.280 Sum_probs=195.1
Q ss_pred CCCCCCCceecccCCCC-CCchHHHHHHHHHhCCceEEecCCeeEEEecCHHHHHHHHHhCCccccccCccccccccccC
Q 040285 35 PPGPTPYPVIGNLLELG-DKPHKSLAKLAKIHGPIMSLKFGQVTTVVFSSAAMAKEILQNQDTSFCNRTIPDAIYAHGHH 113 (298)
Q Consensus 35 pPgP~~~PilGnl~~l~-~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~~~~~~evL~~~~~~f~~Rp~~~~~~~~~~~ 113 (298)
||||+|+|++||++++. ++++..+.+|+++||++|++++|+.++|+|+||++++|+|+++...|++|+.......+.++
T Consensus 1 ppgp~~lP~iG~l~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~pe~~k~il~~~~~~f~~r~~~~~~~~~~~~ 80 (466)
T PLN02655 1 VPAVPGLPVIGNLLQLKEKKPHRTFTKWSEIYGPIYTIRTGASSVVVLNSTEVAKEAMVTKFSSISTRKLSKALTVLTRD 80 (466)
T ss_pred CcCCCCCCccccHHHcCCCchhHHHHHHHHHhCCeEEEEECCEeEEEeCCHHHHHHHHHhcCchhcCCChhhHHHHHhcC
Confidence 79999999999999985 56899999999999999999999999999999999999999999999999754444434332
Q ss_pred CCCcccCCCChhHHHHHHHHHhhcCChhHHhHhHHHHHHHHHHHHHHHHHHhh--CCcceehHHHHHHHHHHHHHHHHhc
Q 040285 114 EFGMPWLPVATLWRNLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCR--AGTAIHIGQAAFDTTLNLISNTIFS 191 (298)
Q Consensus 114 ~~~~~~~~~g~~Wk~~Rr~l~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~--~~~~vd~~~~~~~~t~~ii~~~~fG 191 (298)
+..+++.++|+.||++||.+.+++|+.+.++.+.+.++++++.+++.+.+.++ +++++|+.+.+.++|+|+++.++||
T Consensus 81 ~~~~~~~~~g~~wr~~Rr~~~~~~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~vd~~~~~~~~t~dvi~~~~fG 160 (466)
T PLN02655 81 KSMVATSDYGDFHKMVKRYVMNNLLGANAQKRFRDTRDMLIENMLSGLHALVKDDPHSPVNFRDVFENELFGLSLIQALG 160 (466)
T ss_pred CCceeeCCCcHHHHHHHHHHHHHhcCchHHHHhHHHHHHHHHHHHHHHHhhccccCCCceeHHHHHHHHHHHHHHHHHhc
Confidence 23344446799999999988677888888889999999999999999876543 3678999999999999999999999
Q ss_pred cCCCCCCchh-------HHHHHHHHHHHHHHhCCCCccccccccccCCcccHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 040285 192 IDLADPTSKT-------AREFKQTNWGMMEEAGKPNLSDFFPVLENLDLQGIRRRMTVYFGKMLDVFDRLIDQRLKQRQE 264 (298)
Q Consensus 192 ~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 264 (298)
.+++.....+ ...+...+.+++.......+.+++|+++|+|.....+...+....+.+++.+++++++++...
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 240 (466)
T PLN02655 161 EDVESVYVEELGTEISKEEIFDVLVHDMMMCAIEVDWRDFFPYLSWIPNKSFETRVQTTEFRRTAVMKALIKQQKKRIAR 240 (466)
T ss_pred cccccccccccccchhhHHHHHHHHHHHHHHhCCcchhhhhhhhhhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence 9876532111 123444445555544333344678887777643333444444555678888888888766443
Q ss_pred CCCCCCCCHHHHHhhccccCCCCCCHHhhhhhc
Q 040285 265 RDFTESKDMLDALLKICEDKSVEIDINDIKHLF 297 (298)
Q Consensus 265 ~~~~~~~d~l~~lL~~~~~~~~~lt~~~i~~~~ 297 (298)
+. .+.|+++.|++..+ .+|+++|.+.+
T Consensus 241 ~~--~~~d~l~~ll~~~~----~ls~~~i~~~~ 267 (466)
T PLN02655 241 GE--ERDCYLDFLLSEAT----HLTDEQLMMLV 267 (466)
T ss_pred CC--CcccHHHHHHhccC----CCCHHHHHHHH
Confidence 33 23699999997642 48999887654
No 9
>PLN00168 Cytochrome P450; Provisional
Probab=100.00 E-value=1e-32 Score=259.85 Aligned_cols=265 Identities=20% Similarity=0.287 Sum_probs=193.3
Q ss_pred CCCCCCCCCCCCceecccCCCC---CCchHHHHHHHHHhCCceEEecCCeeEEEecCHHHHHHHHHhCCccccccCcccc
Q 040285 30 GSRRLPPGPTPYPVIGNLLELG---DKPHKSLAKLAKIHGPIMSLKFGQVTTVVFSSAAMAKEILQNQDTSFCNRTIPDA 106 (298)
Q Consensus 30 ~~~~~pPgP~~~PilGnl~~l~---~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~~~~~~evL~~~~~~f~~Rp~~~~ 106 (298)
++.++||||+++|++||++.+. ..++..+.+|+++||++|++++|+.|+|+++||++++|+|++++..|++||....
T Consensus 32 ~~~~lpPgp~~~pl~G~l~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dpe~~~~il~~~~~~f~~rp~~~~ 111 (519)
T PLN00168 32 KGRRLPPGPPAVPLLGSLVWLTNSSADVEPLLRRLIARYGPVVSLRVGSRLSVFVADRRLAHAALVERGAALADRPAVAS 111 (519)
T ss_pred CCCCCCcCCCCCcccccHHhhccccccHHHHHHHHHHHhCCeEEEEcCCccEEEECCHHHHHHHHHhcCCccccCCcccc
Confidence 4457899999999999998663 3578899999999999999999999999999999999999999999999986444
Q ss_pred ccccccCCCCcccCCCChhHHHHHHHHHhhcCChhHHhHhHHHHHHHHHHHHHHHHHHhhCCcceehHHHHHHHHHHHHH
Q 040285 107 IYAHGHHEFGMPWLPVATLWRNLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGTAIHIGQAAFDTTLNLIS 186 (298)
Q Consensus 107 ~~~~~~~~~~~~~~~~g~~Wk~~Rr~l~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~t~~ii~ 186 (298)
...++.+...+++..+|+.||++||.+.+++|+.++++.+.+.+.++++.+++.|.+....++++|+.+.+..++.++|+
T Consensus 112 ~~~~~~~~~~~~~~~~G~~Wk~~Rr~~~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~v~~~~~~~~~~~~ii~ 191 (519)
T PLN00168 112 SRLLGESDNTITRSSYGPVWRLLRRNLVAETLHPSRVRLFAPARAWVRRVLVDKLRREAEDAAAPRVVETFQYAMFCLLV 191 (519)
T ss_pred hhhhccCCCceeCCCCCHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcCHHHHHHHHHHHHHH
Confidence 34332221222334789999999986558999999999999999999999999998754334578999999999999999
Q ss_pred HHHhccCCCCCCchhHHHHHHHHHHHHHHh-CCCCccccccccccCCcccHHHHHHHHHHHHHHHHHHHHHHHHHhhhc-
Q 040285 187 NTIFSIDLADPTSKTAREFKQTNWGMMEEA-GKPNLSDFFPVLENLDLQGIRRRMTVYFGKMLDVFDRLIDQRLKQRQE- 264 (298)
Q Consensus 187 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~- 264 (298)
.++||.+++.. ....+.......+... ....+.+++|.+.+....+..++..+..+++.+++..+|+++++....
T Consensus 192 ~~~fG~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 268 (519)
T PLN00168 192 LMCFGERLDEP---AVRAIAAAQRDWLLYVSKKMSVFAFFPAVTKHLFRGRLQKALALRRRQKELFVPLIDARREYKNHL 268 (519)
T ss_pred HHHcCCCcChh---hHHHHHHHHHHHHHHhcCCCCHHHhCcchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Confidence 99999988632 2233333333332222 222344566754322112223455667888999999999988764311
Q ss_pred ---C--CC---CCCCCHHHHHhhcccc--CCCCCCHHhhhhhc
Q 040285 265 ---R--DF---TESKDMLDALLKICED--KSVEIDINDIKHLF 297 (298)
Q Consensus 265 ---~--~~---~~~~d~l~~lL~~~~~--~~~~lt~~~i~~~~ 297 (298)
+ .. ..+.|+++.|++...+ ++..+|+++|++.+
T Consensus 269 ~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~lt~~~i~~~~ 311 (519)
T PLN00168 269 GQGGEPPKKETTFEHSYVDTLLDIRLPEDGDRALTDDEIVNLC 311 (519)
T ss_pred cccCccccccccccccHHHHHHhhhccccccCCCCHHHHHHHH
Confidence 1 00 0135999999976532 22359999998764
No 10
>PLN02966 cytochrome P450 83A1
Probab=100.00 E-value=1.7e-32 Score=257.38 Aligned_cols=262 Identities=27% Similarity=0.484 Sum_probs=196.0
Q ss_pred CCCCCCCCCCceecccCCC-CCCchHHHHHHHHHhCCceEEecCCeeEEEecCHHHHHHHHHhCCccccccCcccccccc
Q 040285 32 RRLPPGPTPYPVIGNLLEL-GDKPHKSLAKLAKIHGPIMSLKFGQVTTVVFSSAAMAKEILQNQDTSFCNRTIPDAIYAH 110 (298)
Q Consensus 32 ~~~pPgP~~~PilGnl~~l-~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~~~~~~evL~~~~~~f~~Rp~~~~~~~~ 110 (298)
.+.||||+++|++||++++ ..+++..+.+|+++||++|++++|+.++|+++||+++++++.+++..|.+|+........
T Consensus 28 ~~~ppgp~~~p~~G~l~~l~~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvi~~p~~i~~vl~~~~~~~~~~~~~~~~~~~ 107 (502)
T PLN02966 28 YKLPPGPSPLPVIGNLLQLQKLNPQRFFAGWAKKYGPILSYRIGSRTMVVISSAELAKELLKTQDVNFADRPPHRGHEFI 107 (502)
T ss_pred CCCCcCCCCCCeeccHHhcCCCChhHHHHHHHHHhCCeEEEecCCCcEEEECCHHHHHHHHHhCcccccCCCCCccceee
Confidence 4579999999999999988 457889999999999999999999999999999999999999988889888753333332
Q ss_pred ccCCCCcccCCCChhHHHHHHHHHhhcCChhHHhHhHHHHHHHHHHHHHHHHHHhhCCcceehHHHHHHHHHHHHHHHHh
Q 040285 111 GHHEFGMPWLPVATLWRNLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGTAIHIGQAAFDTTLNLISNTIF 190 (298)
Q Consensus 111 ~~~~~~~~~~~~g~~Wk~~Rr~l~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~t~~ii~~~~f 190 (298)
..+..++++..+|+.|+++||++.+++|+++.++.+.+.+.++++.+++.|.+.+..|+++|+.+.+..+|+++|+.++|
T Consensus 108 ~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~t~dvi~~~~f 187 (502)
T PLN02966 108 SYGRRDMALNHYTPYYREIRKMGMNHLFSPTRVATFKHVREEEARRMMDKINKAADKSEVVDISELMLTFTNSVVCRQAF 187 (502)
T ss_pred ccCcceeeeCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceeHHHHHHHHHHHHHHHHHh
Confidence 22223344556799999999995578999999999999999999999999987554567899999999999999999999
Q ss_pred ccCCCCCCchhHHHHHHHHHHHHHHhCCCCccccccccccCC-cccHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCC
Q 040285 191 SIDLADPTSKTAREFKQTNWGMMEEAGKPNLSDFFPVLENLD-LQGIRRRMTVYFGKMLDVFDRLIDQRLKQRQERDFTE 269 (298)
Q Consensus 191 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 269 (298)
|.+++... ++..++.+.+.......+...+.+++|++.+++ +.+..+......+...+++.+.++++.+...+.. +
T Consensus 188 G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~--~ 264 (502)
T PLN02966 188 GKKYNEDG-EEMKRFIKILYGTQSVLGKIFFSDFFPYCGFLDDLSGLTAYMKECFERQDTYIQEVVNETLDPKRVKP--E 264 (502)
T ss_pred CCccCccc-hHHHHHHHHHHHHHHHhCcccHHHhhchhhhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHhcccccc--c
Confidence 99987542 245566666666655555433445666543332 2222333344556677777777776654322122 2
Q ss_pred CCCHHHHHhhccccC--CCCCCHHhhhhh
Q 040285 270 SKDMLDALLKICEDK--SVEIDINDIKHL 296 (298)
Q Consensus 270 ~~d~l~~lL~~~~~~--~~~lt~~~i~~~ 296 (298)
..|+++.|+++.+++ +..+++++|.+.
T Consensus 265 ~~~~l~~l~~~~~~~~~~~~l~~~~i~~~ 293 (502)
T PLN02966 265 TESMIDLLMEIYKEQPFASEFTVDNVKAV 293 (502)
T ss_pred cccHHHHHHHHHhccCcCCCCCHHHHHHH
Confidence 369999999765442 235899988765
No 11
>PLN03018 homomethionine N-hydroxylase
Probab=100.00 E-value=1.9e-31 Score=251.15 Aligned_cols=265 Identities=18% Similarity=0.318 Sum_probs=184.3
Q ss_pred CCCCCCCCCCceecccCCCC-CCch-HHHHHHHHHh-CCceEEecCCeeEEEecCHHHHHHHHHhCCccccccCcccccc
Q 040285 32 RRLPPGPTPYPVIGNLLELG-DKPH-KSLAKLAKIH-GPIMSLKFGQVTTVVFSSAAMAKEILQNQDTSFCNRTIPDAIY 108 (298)
Q Consensus 32 ~~~pPgP~~~PilGnl~~l~-~~~~-~~~~~~~~~y-G~i~~~~~g~~~~vvv~~~~~~~evL~~~~~~f~~Rp~~~~~~ 108 (298)
.+.||||+++|++||++++. +.++ ..+.++.++| |++|++++|+.++|+++||++++|+|++++..|++||......
T Consensus 39 ~~~PPgp~~~P~iGnl~~l~~~~~~~~~~~~~~~~~~g~i~~~~lg~~~~vvvsdpe~ikevl~~~~~~f~~rp~~~~~~ 118 (534)
T PLN03018 39 RQLPPGPPGWPILGNLPELIMTRPRSKYFHLAMKELKTDIACFNFAGTHTITINSDEIAREAFRERDADLADRPQLSIME 118 (534)
T ss_pred CCCCcCCCCCCeeccHHHhccCCCcchhHHHHHHHhCCCeEEEEeCCccEEEECCHHHHHHHHHhCcHhhcCCCCchhhh
Confidence 45799999999999999874 3343 3456667776 7999999999999999999999999999999999998655554
Q ss_pred ccccCCCCcccCCCChhHHHHHHHHHhhcC-ChhHHhHhHHHHHHHHHHHHHHHHHHhhCCcceehHHHHHHHHHHHHHH
Q 040285 109 AHGHHEFGMPWLPVATLWRNLRKICNSHAF-SSRQLDANQHLRRKKIQDLLAYVQENCRAGTAIHIGQAAFDTTLNLISN 187 (298)
Q Consensus 109 ~~~~~~~~~~~~~~g~~Wk~~Rr~l~~~~f-~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~t~~ii~~ 187 (298)
.++.++.++++..+|+.||++||++ ++.| +....+.+.++++.+++.+++.|.+....++++|+.+++.++++|+|++
T Consensus 119 ~l~~~~~~i~~~~~G~~Wk~~Rk~l-~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~t~~vi~~ 197 (534)
T PLN03018 119 TIGDNYKSMGTSPYGEQFMKMKKVI-TTEIMSVKTLNMLEAARTIEADNLIAYIHSMYQRSETVDVRELSRVYGYAVTMR 197 (534)
T ss_pred hhccCCCceEecCCCHHHHHHHHHH-HHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCceeHHHHHHHHHHHHHHH
Confidence 4433334566767799999999999 4554 5545555666777789999999986543456899999999999999999
Q ss_pred HHhccCCCCCC------chhHHHHH---HHHHHHHHHhCCCCcccccc-ccccCCcccHHHHHHHHHHHHHHHHHHHHHH
Q 040285 188 TIFSIDLADPT------SKTAREFK---QTNWGMMEEAGKPNLSDFFP-VLENLDLQGIRRRMTVYFGKMLDVFDRLIDQ 257 (298)
Q Consensus 188 ~~fG~~~~~~~------~~~~~~~~---~~~~~~~~~~~~~~~~~~~P-~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~ 257 (298)
++||.++.... .+....+. ..+...........+.+++| ++++.++.+..++.......+++++.++|++
T Consensus 198 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 277 (534)
T PLN03018 198 MLFGRRHVTKENVFSDDGRLGKAEKHHLEVIFNTLNCLPGFSPVDYVERWLRGWNIDGQEERAKVNVNLVRSYNNPIIDE 277 (534)
T ss_pred HHhCCccccccccccccccchhHHHHHHHHHHHHHHHhCCCcHHHHhhhhhhhhcccchHHHHHHHHHHHHHHHHHHHHH
Confidence 99999875321 11111122 22222222222222334555 4443222334445556677889999999999
Q ss_pred HHHhhhcC-CCCCCCCHHHHHhhccccCCC-CCCHHhhhhhc
Q 040285 258 RLKQRQER-DFTESKDMLDALLKICEDKSV-EIDINDIKHLF 297 (298)
Q Consensus 258 ~~~~~~~~-~~~~~~d~l~~lL~~~~~~~~-~lt~~~i~~~~ 297 (298)
+++...+. +...+.|+++.|++..++++. .+|+++|.+.+
T Consensus 278 ~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~ls~~~i~~~~ 319 (534)
T PLN03018 278 RVELWREKGGKAAVEDWLDTFITLKDQNGKYLVTPDEIKAQC 319 (534)
T ss_pred HHHHhhhccCCCCcccHHHHHHHhhcccCCCCCCHHHHHHHH
Confidence 87654221 110236999999986544332 49999987654
No 12
>KOG0158 consensus Cytochrome P450 CYP3/CYP5/CYP6/CYP9 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=6.7e-32 Score=246.35 Aligned_cols=279 Identities=23% Similarity=0.332 Sum_probs=192.0
Q ss_pred hHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCCceecccCCCC--CCchHHHHHHHHHhCCceEEecCCeeEEEecCH
Q 040285 7 VPWLLFSWILVVALNYFSRGFKSGSRRLPPGPTPYPVIGNLLELG--DKPHKSLAKLAKIHGPIMSLKFGQVTTVVFSSA 84 (298)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~pPgP~~~PilGnl~~l~--~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~~ 84 (298)
+.+++++.+.++++.++.+....++++..|||+|+|++||+..+. +.+.....+...+||++++++.|.+|.++|+||
T Consensus 5 ~~~~l~~~l~~l~y~~~~~~~~yw~rrGi~~~~p~p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~~G~y~~~~p~l~v~D~ 84 (499)
T KOG0158|consen 5 LLLLLLILLLVLLYLWLRWTYSYWRRRGIPGPKPLPFLGNLPGMLKRERPGDLLLDIYTKYRPVVGIYEGRQPALLVSDP 84 (499)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhhccCCCCCCCCCCcEecHHHHHhccCcHHHHHHHHhcCCCEEEEEecCCcceEecCH
Confidence 333344333344445555554566677999999999999998873 334444444334449999999999999999999
Q ss_pred HHHHHHHHhCCccccccC--cccccc-ccccCCCCcccCCCChhHHHHHHHHHhhcCChhHHhHhHHHHHHHHHHHHHHH
Q 040285 85 AMAKEILQNQDTSFCNRT--IPDAIY-AHGHHEFGMPWLPVATLWRNLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYV 161 (298)
Q Consensus 85 ~~~~evL~~~~~~f~~Rp--~~~~~~-~~~~~~~~~~~~~~g~~Wk~~Rr~l~~~~f~~~~l~~~~~~~~~~~~~l~~~l 161 (298)
|+|||||+++.++|++|. ...... .+. ...+|..+|++||++|..+ +|+|++++++.+.+.+++.++.+++++
T Consensus 85 elik~I~ik~F~~F~~r~~~~~~d~~~~l~---~~~Lf~~~g~~WK~lR~~l-sP~Fts~kmk~m~~t~~~~~~~l~~~l 160 (499)
T KOG0158|consen 85 ELIKEILIKDFDNFYNRKRPIYGDPEDPLS---ALNLFFLRGERWKRLRTKL-SPTFTSGKLKKMFPTMEEVGDELVRHL 160 (499)
T ss_pred HHHHHHHHHhCccCcCCCCCCcCCCCCccc---ccCchhccCchHHHHHHhh-ccccchhhHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999953 222222 221 1336778999999999998 899999999999999999999999999
Q ss_pred HHHhhCCcceehHHHHHHHHHHHHHHHHhccCCCCCCchhHHHHHHHHHHHHHHh-CCCCc----cccccccccCCcccH
Q 040285 162 QENCRAGTAIHIGQAAFDTTLNLISNTIFSIDLADPTSKTAREFKQTNWGMMEEA-GKPNL----SDFFPVLENLDLQGI 236 (298)
Q Consensus 162 ~~~~~~~~~vd~~~~~~~~t~~ii~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~----~~~~P~l~~l~~~~~ 236 (298)
++....++.+++.+.+.++|+|||++++||.+.++..+ ...+|...-...+... ....+ ...+|.+... +
T Consensus 161 ~~~~~~~~~~~~~dl~~~yT~DVI~~~AfG~~~~s~~d-~~~~F~~~~~~~~~~~~~~~~l~~~~~~~~p~l~~~-l--- 235 (499)
T KOG0158|consen 161 RRKSEGGQEGEIKDLCARYTTDVIGSCAFGLDANSLRD-PKAEFRRMGRRAFFLSRGLFPLKFMLIFLFPKLALP-L--- 235 (499)
T ss_pred HHhhcccCCccHHHHHHHHHHHHHhHhhcccchhhhcC-chHHHHHhhHHHHHHhhccchHhHhHHHHhHHHHHh-h---
Confidence 98654335788999999999999999999999998754 4456665555544432 11111 1122222110 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCHHHHHhhcccc---CC--C-CCCHHhhhhhc
Q 040285 237 RRRMTVYFGKMLDVFDRLIDQRLKQRQERDFTESKDMLDALLKICED---KS--V-EIDINDIKHLF 297 (298)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~l~~lL~~~~~---~~--~-~lt~~~i~~~~ 297 (298)
+.........+++.+++.++.+.++..+. .+.||+|.|++++++ +. . .+|.++|++..
T Consensus 236 --~~~~~~~~~~~~~~~~v~~~v~~R~~~~~-~r~Dfi~lll~~~~~~~~~~~~~~~lt~dei~aQa 299 (499)
T KOG0158|consen 236 --RVKLFPEDVTDFFRKLVNSRVEQREKENI-ERNDFIDLLLDARASDFAKSKSHKALTDDEIAAQA 299 (499)
T ss_pred --hcccChHHHHHHHHHHHHHHHHHHHhcCC-CCchHHHHHHHhhcccccccccccccCHHHHHHHH
Confidence 11122334444555555555444433332 467999999998853 11 1 49999998865
No 13
>PLN02290 cytokinin trans-hydroxylase
Probab=100.00 E-value=8.1e-32 Score=253.70 Aligned_cols=256 Identities=18% Similarity=0.226 Sum_probs=183.4
Q ss_pred CCCCCCCCCCCceecccCCCCC-------------------CchHHHHHHHHHhCCceEEecCCeeEEEecCHHHHHHHH
Q 040285 31 SRRLPPGPTPYPVIGNLLELGD-------------------KPHKSLAKLAKIHGPIMSLKFGQVTTVVFSSAAMAKEIL 91 (298)
Q Consensus 31 ~~~~pPgP~~~PilGnl~~l~~-------------------~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~~~~~~evL 91 (298)
+.+.||||+++|++||++++.. .....+.+|+++||++|++|+|+.++|+++||++++|+|
T Consensus 40 ~~~~~PGP~~~P~iGnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~v~~il 119 (516)
T PLN02290 40 ERQGVRGPKPRPLTGNILDVSALVSQSTSKDMDSIHHDIVGRLLPHYVAWSKQYGKRFIYWNGTEPRLCLTETELIKELL 119 (516)
T ss_pred HHcCCCCCCCCcCCCCHHHHHHHHHHhhcCCCCCCCcccccccchHHHHHHHHhCCeEEEccCCccEEEECCHHHHHHHH
Confidence 4567999999999999987631 122357899999999999999999999999999999999
Q ss_pred HhCCccccccCccccc--cccccCCCCcccCCCChhHHHHHHHHHhhcCChhHHhHhHHHHHHHHHHHHHHHHHHhhCC-
Q 040285 92 QNQDTSFCNRTIPDAI--YAHGHHEFGMPWLPVATLWRNLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAG- 168 (298)
Q Consensus 92 ~~~~~~f~~Rp~~~~~--~~~~~~~~~~~~~~~g~~Wk~~Rr~l~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~- 168 (298)
+++ ..+.+|+..... ... .+ .++ +..+|+.||++||++ +++|+.++++.+.+.+.++++.+++.|.+....+
T Consensus 120 ~~~-~~~~~r~~~~~~~~~~~-~g-~~l-~~~~g~~Wk~~Rk~~-~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~ 194 (516)
T PLN02290 120 TKY-NTVTGKSWLQQQGTKHF-IG-RGL-LMANGADWYHQRHIA-APAFMGDRLKGYAGHMVECTKQMLQSLQKAVESGQ 194 (516)
T ss_pred hcC-CCCCCCcchhhhHHHHH-hc-CCc-cccCchHHHHHHhhc-ccccCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 987 557777632211 112 12 354 556899999999998 7899999999999999999999999998754333
Q ss_pred cceehHHHHHHHHHHHHHHHHhccCCCCCCchhHHHHHHHHHHHHHHhCCCCccccccccccCCcccHHHHHHHHHHHHH
Q 040285 169 TAIHIGQAAFDTTLNLISNTIFSIDLADPTSKTAREFKQTNWGMMEEAGKPNLSDFFPVLENLDLQGIRRRMTVYFGKML 248 (298)
Q Consensus 169 ~~vd~~~~~~~~t~~ii~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~ 248 (298)
+++|+.+.+..+++|+|+.++||.+++.. + ++.+.+.+.............+|++.++|. +..++..+..+.+.
T Consensus 195 ~~vd~~~~~~~~~~~vi~~~~fG~~~~~~-~----~~~~~~~~~~~~~~~~~~~~~~p~~~~~p~-~~~~~~~~~~~~~~ 268 (516)
T PLN02290 195 TEVEIGEYMTRLTADIISRTEFDSSYEKG-K----QIFHLLTVLQRLCAQATRHLCFPGSRFFPS-KYNREIKSLKGEVE 268 (516)
T ss_pred ceEEhHHHHHHHHHHHHHHHHcCCccccc-h----HHHHHHHHHHHHHHHhhhhhcCchhhhCCC-hhHHHHHHHHHHHH
Confidence 58999999999999999999999987643 2 222222222221111011123555555542 23455666778899
Q ss_pred HHHHHHHHHHHHhhhcCC-CCCCCCHHHHHhhccccC---CCCCCHHhhhhhc
Q 040285 249 DVFDRLIDQRLKQRQERD-FTESKDMLDALLKICEDK---SVEIDINDIKHLF 297 (298)
Q Consensus 249 ~~~~~~i~~~~~~~~~~~-~~~~~d~l~~lL~~~~~~---~~~lt~~~i~~~~ 297 (298)
+++.++|+++++..+.+. ....+|+++.|+++.+++ +..+++++|.+.+
T Consensus 269 ~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~l~~~~i~~~~ 321 (516)
T PLN02290 269 RLLMEIIQSRRDCVEIGRSSSYGDDLLGMLLNEMEKKRSNGFNLNLQLIMDEC 321 (516)
T ss_pred HHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHhccccCCCCCCCCHHHHHHHH
Confidence 999999999876543321 002469999999865421 2248888887643
No 14
>PTZ00404 cytochrome P450; Provisional
Probab=100.00 E-value=2.3e-31 Score=248.66 Aligned_cols=246 Identities=21% Similarity=0.316 Sum_probs=185.5
Q ss_pred CCCCCCCCCCCCCceecccCCCCCCchHHHHHHHHHhCCceEEecCCeeEEEecCHHHHHHHHHhCCccccccCcccccc
Q 040285 29 SGSRRLPPGPTPYPVIGNLLELGDKPHKSLAKLAKIHGPIMSLKFGQVTTVVFSSAAMAKEILQNQDTSFCNRTIPDAIY 108 (298)
Q Consensus 29 ~~~~~~pPgP~~~PilGnl~~l~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~~~~~~evL~~~~~~f~~Rp~~~~~~ 108 (298)
.++...+|||+++|++||++++.++++..+.+|+++||++|++++|+.++|+++||++++|++.++...|.+||..+...
T Consensus 25 ~~~~~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~r~~~~~~~ 104 (482)
T PTZ00404 25 KIHKNELKGPIPIPILGNLHQLGNLPHRDLTKMSKKYGGIFRIWFADLYTVVLSDPILIREMFVDNFDNFSDRPKIPSIK 104 (482)
T ss_pred hccCCCCCCCCCCCeeccHhhhcccHHHHHHHHHHHhCCeeEEEecCCCEEEECCHHHHHHHHHhcchhhcCCCCcceee
Confidence 34456789999999999998887788999999999999999999999999999999999999998888898887544332
Q ss_pred ccccCCCCcccCCCChhHHHHHHHHHhhcCChhHHhHhHHHHHHHHHHHHHHHHHHhhCCcceehHHHHHHHHHHHHHHH
Q 040285 109 AHGHHEFGMPWLPVATLWRNLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGTAIHIGQAAFDTTLNLISNT 188 (298)
Q Consensus 109 ~~~~~~~~~~~~~~g~~Wk~~Rr~l~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~t~~ii~~~ 188 (298)
.... +.|+ +..+|+.|+++||++ ++.|+++.++.+.+.+.++++.+++.|.+.+..|+++|+.+.+.++++++|+++
T Consensus 105 ~~~~-~~~l-~~~~g~~w~~~Rk~~-~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~dvi~~~ 181 (482)
T PTZ00404 105 HGTF-YHGI-VTSSGEYWKRNREIV-GKAMRKTNLKHIYDLLDDQVDVLIESMKKIESSGETFEPRYYLTKFTMSAMFKY 181 (482)
T ss_pred eecc-CCce-eccChHHHHHHHHHH-HHHHhhhccccHHHHHHHHHHHHHHHHHHHHhcCCccCHHHHHHHHHHHHHHHH
Confidence 2112 2454 456899999999998 789999999999999999999999999865445678999999999999999999
Q ss_pred HhccCCCCCCc---hhHHHHHHHHHHHHHHhCCCCccccccccccCCcccHHHHHHHHHHHHHHHHHHHHHHHHHhhhcC
Q 040285 189 IFSIDLADPTS---KTAREFKQTNWGMMEEAGKPNLSDFFPVLENLDLQGIRRRMTVYFGKMLDVFDRLIDQRLKQRQER 265 (298)
Q Consensus 189 ~fG~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 265 (298)
+||.++...++ .....+.+.+.+++...+...+.+++|++... +..+.....+..+.+.+++.+.+++++++.+..
T Consensus 182 ~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 260 (482)
T PTZ00404 182 IFNEDISFDEDIHNGKLAELMGPMEQVFKDLGSGSLFDVIEITQPL-YYQYLEHTDKNFKKIKKFIKEKYHEHLKTIDPE 260 (482)
T ss_pred HhccccccccccchhHHHHHHHHHHHHHHHhCCCchhhhhhHhhhh-hHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCC
Confidence 99998764321 13356777777777655433333333332221 111112234456677778888877766543222
Q ss_pred CCCCCCCHHHHHhhcc
Q 040285 266 DFTESKDMLDALLKIC 281 (298)
Q Consensus 266 ~~~~~~d~l~~lL~~~ 281 (298)
.++|+++.|+++.
T Consensus 261 ---~~~dll~~ll~~~ 273 (482)
T PTZ00404 261 ---VPRDLLDLLIKEY 273 (482)
T ss_pred ---CcccHHHHHHHHh
Confidence 2469999999865
No 15
>PLN02394 trans-cinnamate 4-monooxygenase
Probab=100.00 E-value=1.4e-30 Score=244.62 Aligned_cols=282 Identities=23% Similarity=0.338 Sum_probs=193.1
Q ss_pred HHHHHHHHHHHHHHhhccCCCCCCCCCCCCCceecccCCCCCC-chHHHHHHHHHhCCceEEecCCeeEEEecCHHHHHH
Q 040285 11 LFSWILVVALNYFSRGFKSGSRRLPPGPTPYPVIGNLLELGDK-PHKSLAKLAKIHGPIMSLKFGQVTTVVFSSAAMAKE 89 (298)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~pPgP~~~PilGnl~~l~~~-~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~~~~~~e 89 (298)
|+++.+++++.+.+.....++.+.||||+++|++||++++.++ .+..+.+|+++||++|++++|+.++|+++||+.+++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~pPgp~~~p~~g~l~~~~~~~~~~~~~~~~~~yG~v~~i~~g~~~~v~v~dpe~i~~ 87 (503)
T PLN02394 8 LLGLFVAIVLALLVSKLRGKKLKLPPGPAAVPIFGNWLQVGDDLNHRNLAEMAKKYGDVFLLRMGQRNLVVVSSPELAKE 87 (503)
T ss_pred HHHHHHHHHHHHHHHHHhcCcCCCCcCCCCCCeeeeHHhcCCCchhHHHHHHHHHhCCeEEEEcCCeeEEEeCCHHHHHH
Confidence 3333444444444444445556789999999999999888543 578999999999999999999999999999999999
Q ss_pred HHHhCCccccccCccccccccccCCCCcccCCCChhHHHHHHHHHhhcCChhHHhHhHHHHHHHHHHHHHHHHHHhh-CC
Q 040285 90 ILQNQDTSFCNRTIPDAIYAHGHHEFGMPWLPVATLWRNLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCR-AG 168 (298)
Q Consensus 90 vL~~~~~~f~~Rp~~~~~~~~~~~~~~~~~~~~g~~Wk~~Rr~l~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~-~~ 168 (298)
++.+++..|.+|+.......+...+.++++..+|+.|+++||++..+.|+++.++.+.+.++++++.+++.|.+..+ ++
T Consensus 88 il~~~~~~~~~r~~~~~~~~~~g~~~~~l~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~i~~~v~~lv~~l~~~~~~~~ 167 (503)
T PLN02394 88 VLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGDHWRKMRRIMTVPFFTNKVVQQYRYGWEEEADLVVEDVRANPEAAT 167 (503)
T ss_pred HHHhCCccccCCCCcchHhHhccCCCceeecCCCHHHHHHHHHHHHHhcChHHHHHhhHHHHHHHHHHHHHHHHhhhccC
Confidence 99999889999875444443322233456778899999999998558899989999999999999999999976542 24
Q ss_pred cceehHHHHHHHHHHHHHHHHhccCCCCCCchhHHHHHHHHHHHHHHhCC--CCccccccccccCCcccHHHHHHHHHHH
Q 040285 169 TAIHIGQAAFDTTLNLISNTIFSIDLADPTSKTAREFKQTNWGMMEEAGK--PNLSDFFPVLENLDLQGIRRRMTVYFGK 246 (298)
Q Consensus 169 ~~vd~~~~~~~~t~~ii~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~P~l~~l~~~~~~~~~~~~~~~ 246 (298)
+.+|+.+.+..+++|++++++||.+++...++....+.....+....... ..+.+++|++... +....+........
T Consensus 168 ~~v~~~~~~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 246 (503)
T PLN02394 168 EGVVIRRRLQLMMYNIMYRMMFDRRFESEDDPLFLKLKALNGERSRLAQSFEYNYGDFIPILRPF-LRGYLKICQDVKER 246 (503)
T ss_pred CcEecHHHHHHHHHHHHHHHHhCCCcccccchhHHHHHHHHHHHHHHhcccccchhhhchHHHHH-hhHHHHHHHHHHHH
Confidence 57999999999999999999999998754332233333333333222221 1223345543321 11111222222222
Q ss_pred HHH-HHHHHHHHHHHhhhc---CCCCCCCCHHHHHhhccccCCCCCCHHhhhhh
Q 040285 247 MLD-VFDRLIDQRLKQRQE---RDFTESKDMLDALLKICEDKSVEIDINDIKHL 296 (298)
Q Consensus 247 ~~~-~~~~~i~~~~~~~~~---~~~~~~~d~l~~lL~~~~~~~~~lt~~~i~~~ 296 (298)
... +...+++++++..+. .+. ..+|+++.|+++.++ +.+++++|.+.
T Consensus 247 ~~~~~~~~~i~~~~~~~~~~~~~~~-~~~d~l~~ll~~~~~--~~l~~~~i~~~ 297 (503)
T PLN02394 247 RLALFKDYFVDERKKLMSAKGMDKE-GLKCAIDHILEAQKK--GEINEDNVLYI 297 (503)
T ss_pred HHHHHHHHHHHHHHHHhhhccCCcc-hhhhHHHHHHhcccc--CCCCHHHHHHH
Confidence 222 334467777654321 111 236999999987643 34899888654
No 16
>PLN02500 cytochrome P450 90B1
Probab=99.97 E-value=6.6e-30 Score=239.27 Aligned_cols=244 Identities=20% Similarity=0.249 Sum_probs=173.0
Q ss_pred CCCCCCCCCCCCCceecccCCC-C----CCchHHHHHHHHHhCCceEEecCCeeEEEecCHHHHHHHHHhCCccccccCc
Q 040285 29 SGSRRLPPGPTPYPVIGNLLEL-G----DKPHKSLAKLAKIHGPIMSLKFGQVTTVVFSSAAMAKEILQNQDTSFCNRTI 103 (298)
Q Consensus 29 ~~~~~~pPgP~~~PilGnl~~l-~----~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~~~~~~evL~~~~~~f~~Rp~ 103 (298)
.++.+.||||+++|++||++.+ . +.++..+.+|+++||++|++++|+.++||++||++++|+|++++..|++|..
T Consensus 34 ~~~~~~PPgp~~~PiiGn~~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvv~~p~~~~~vl~~~~~~f~~~~~ 113 (490)
T PLN02500 34 QKRFNLPPGNMGWPFLGETIGYLKPYSATSIGEFMEQHISRYGKIYRSNLFGEPTIVSADAGLNRFILQNEGRLFECSYP 113 (490)
T ss_pred cCCCCCCCCCcCCCchhhHHHHHhhcccCChHHHHHHHHHHhcccccccccCCCeEEecCHHHHHHHHhCCCCeEEeeCc
Confidence 4445689999999999998653 2 3467888999999999999999999999999999999999999988976532
Q ss_pred cccccccccCCCCcccCCCChhHHHHHHHHHhhcCChhHHhH-hHHHHHHHHHHHHHHHHHHhhCCcceehHHHHHHHHH
Q 040285 104 PDAIYAHGHHEFGMPWLPVATLWRNLRKICNSHAFSSRQLDA-NQHLRRKKIQDLLAYVQENCRAGTAIHIGQAAFDTTL 182 (298)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~g~~Wk~~Rr~l~~~~f~~~~l~~-~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~t~ 182 (298)
......+ . ..++ +..+|+.||++||++ ++.|++.+++. +.+.+.+.+..+++.|. +++++|+.+.+.++++
T Consensus 114 ~~~~~~~-g-~~~~-~~~~g~~wr~~Rk~~-~~~f~~~~l~~~~~~~~~~~~~~~~~~~~----~~~~vd~~~~~~~~~~ 185 (490)
T PLN02500 114 RSIGGIL-G-KWSM-LVLVGDMHRDMRSIS-LNFLSHARLRTHLLKEVERHTLLVLDSWK----ENSTFSAQDEAKKFTF 185 (490)
T ss_pred hHHHHHh-C-cccc-cccCCHHHHHHHHHH-HHhcChHHHHHHHHHHHHHHHHHHHHHhC----CCCCEEehHHHHHHHH
Confidence 2222222 2 2244 345899999999998 68899988876 45677777777776663 2457999999999999
Q ss_pred HHHHHHHhccCCCCCCchhHHHHHHHHHHHHHHhCCCCccccccccccCCcccHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 040285 183 NLISNTIFSIDLADPTSKTAREFKQTNWGMMEEAGKPNLSDFFPVLENLDLQGIRRRMTVYFGKMLDVFDRLIDQRLKQR 262 (298)
Q Consensus 183 ~ii~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 262 (298)
|+|++++||.+.+.. +...+...+.+....... ... .+|. .. .++..+..+.+.+++.++|++++++.
T Consensus 186 ~vi~~~~fg~~~~~~---~~~~~~~~~~~~~~~~~~-~~~-~~p~------~~-~~~~~~~~~~~~~~~~~~i~~~~~~~ 253 (490)
T PLN02500 186 NLMAKHIMSMDPGEE---ETEQLKKEYVTFMKGVVS-APL-NFPG------TA-YRKALKSRATILKFIERKMEERIEKL 253 (490)
T ss_pred HHHHHHHhCCCCCch---HHHHHHHHHHHHHhhhhc-chh-cCCC------cc-cHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 999999999876432 233444334443332111 000 1221 11 24555677889999999999887654
Q ss_pred hcCCC-CCCCCHHHHHhhccccCCCCCCHHhhhhhc
Q 040285 263 QERDF-TESKDMLDALLKICEDKSVEIDINDIKHLF 297 (298)
Q Consensus 263 ~~~~~-~~~~d~l~~lL~~~~~~~~~lt~~~i~~~~ 297 (298)
.+++. ..+.|+++.|++.. .+|+++|++.+
T Consensus 254 ~~~~~~~~~~d~l~~ll~~~-----~ls~~~i~~~~ 284 (490)
T PLN02500 254 KEEDESVEEDDLLGWVLKHS-----NLSTEQILDLI 284 (490)
T ss_pred hcccCCCCcchHHHHHHhcc-----CCCHHHHHHHH
Confidence 32210 02369999999742 38999887754
No 17
>PF00067 p450: Cytochrome P450 p450 superfamily signature b-class p450 signature mitochondrial p450 signature E-class p450 group I signature E-class p450 group II signature E-class p450 group IV signature; InterPro: IPR001128 Cytochrome P450 enzymes are a superfamily of haem-containing mono-oxygenases that are found in all kingdoms of life, and which show extraordinary diversity in their reaction chemistry. In mammals, these proteins are found primarily in microsomes of hepatocytes and other cell types, where they oxidise steroids, fatty acids and xenobiotics, and are important for the detoxification and clearance of various compounds, as well as for hormone synthesis and breakdown, cholesterol synthesis and vitamin D metabolism. In plants, these proteins are important for the biosynthesis of several compounds such as hormones, defensive compounds and fatty acids. In bacteria, they are important for several metabolic processes, such as the biosynthesis of antibiotic erythromycin in Saccharopolyspora erythraea (Streptomyces erythraeus). Cytochrome P450 enzymes use haem to oxidise their substrates, using protons derived from NADH or NADPH to split the oxygen so a single atom can be added to a substrate. They also require electrons, which they receive from a variety of redox partners. In certain cases, cytochrome P450 can be fused to its redox partner to produce a bi-functional protein, such as with P450BM-3 from Bacillus megaterium [], which has haem and flavin domains. Organisms produce many different cytochrome P450 enzymes (at least 58 in humans), which together with alternative splicing can provide a wide array of enzymes with different substrate and tissue specificities. Individual cytochrome P450 proteins follow the nomenclature: CYP, followed by a number (family), then a letter (subfamily), and another number (protein); e.g. CYP3A4 is the fourth protein in family 3, subfamily A. In general, family members should share >40% identity, while subfamily members should share >55% identity. Cytochrome P450 proteins can also be grouped by two different schemes. One scheme was based on a taxonomic split: class I (prokaryotic/mitochondrial) and class II (eukaryotic microsomes). The other scheme was based on the number of components in the system: class B (3-components) and class E (2-components). These classes merge to a certain degree. Most prokaryotes and mitochondria (and fungal CYP55) have 3-component systems (class I/class B) - a FAD-containing flavoprotein (NAD(P)H-dependent reductase), an iron-sulphur protein and P450. Most eukaryotic microsomes have 2-component systems (class II/class E) - NADPH:P450 reductase (FAD and FMN-containing flavoprotein) and P450. There are exceptions to this scheme, such as 1-component systems that resemble class E enzymes [, , ]. The class E enzymes can be further subdivided into five sequence clusters, groups I-V, each of which may contain more than one cytochrome P450 family (eg, CYP1 and CYP2 are both found in group I). The divergence of the cytochrome P450 superfamily into B- and E-classes, and further divergence into stable clusters within the E-class, appears to be very ancient, occurring before the appearance of eukaryotes. More information about these proteins can be found at Protein of the Month: Cytochrome P450 [].; GO: 0005506 iron ion binding, 0009055 electron carrier activity, 0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 0020037 heme binding, 0055114 oxidation-reduction process; PDB: 2RFC_B 2RFB_A 3EJB_H 3EJE_H 3EJD_H 1N6B_A 1NR6_A 1DT6_A 3EL3_A 3DBG_B ....
Probab=99.97 E-value=7e-30 Score=235.34 Aligned_cols=258 Identities=25% Similarity=0.411 Sum_probs=201.1
Q ss_pred CCCCCCCceecccCCCC--CCchHHHHHHHHHhCCceEEecCCeeEEEecCHHHHHHHHHhCCccccccCccccccc--c
Q 040285 35 PPGPTPYPVIGNLLELG--DKPHKSLAKLAKIHGPIMSLKFGQVTTVVFSSAAMAKEILQNQDTSFCNRTIPDAIYA--H 110 (298)
Q Consensus 35 pPgP~~~PilGnl~~l~--~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~~~~~~evL~~~~~~f~~Rp~~~~~~~--~ 110 (298)
||||+++|++||++++. +++++.+.+|+++||++|++++|+.++|+|+||+++++++.++...|+.++....... .
T Consensus 1 Ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~~~~vvv~~pe~~~~il~~~~~~~~~~~~~~~~~~~~~ 80 (463)
T PF00067_consen 1 PPGPPPLPILGNLLQFRRKGNPHEFFRELHKKYGPIFRIWPGGQPIVVVSDPELIKEILRSRSKYFSFRPRPPWFEIFRG 80 (463)
T ss_dssp SSCSSSBTTTBTHHHHHTTHHHHHHHHHHHHHHTSEEEEEETTEEEEEEESHHHHHHHHTTTTTTEEEEHCHHHHHHHHH
T ss_pred CcCCCCcCceeEHHHhcCCCcHHHHHHHHHHHhCCEEEEeEecccccccccchhhccccccccccccccccccccccccc
Confidence 89999999999999985 5688999999999999999999999999999999999999999888988764333322 1
Q ss_pred ccCCCCcccCCCChhHHHHHHHHHhhcCChh-HHhHhHHHHHHHHHHHHHHHHHHhhCCcceehHHHHHHHHHHHHHHHH
Q 040285 111 GHHEFGMPWLPVATLWRNLRKICNSHAFSSR-QLDANQHLRRKKIQDLLAYVQENCRAGTAIHIGQAAFDTTLNLISNTI 189 (298)
Q Consensus 111 ~~~~~~~~~~~~g~~Wk~~Rr~l~~~~f~~~-~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~t~~ii~~~~ 189 (298)
...+.++ +..+|+.|+++|+++ ++.|+.. .+ .+.+.++++++.+++.|.+....++++|+.+.+..+++++++.++
T Consensus 81 ~~~~~~l-~~~~~~~~~~~R~~~-~~~~~~~~~~-~~~~~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~d~i~~~~ 157 (463)
T PF00067_consen 81 PFGGKGL-FFSDGERWRRQRRLL-APAFSSKKIL-KLEPLIDEEAEELIDQLRKKAGSSGPVDLFDWLRRFALDVIGRVL 157 (463)
T ss_dssp HHTTTSS-TTSSHHHHHHHHHHH-HHHHSHHHHH-HHHHHHHHHHHHHHHHHHHTTTSESEEEHHHHHHHHHHHHHHHHH
T ss_pred ccccccc-ccccccccccccccc-cccccccccc-ccccccccccccccccccccccccceeeeeccccccccccccccc
Confidence 1223454 446789999999998 6778877 55 899999999999999999875434479999999999999999999
Q ss_pred hccCCCCCCchhHHHHHHHHHHHHHHhCCC--CccccccccccCCcccHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCC
Q 040285 190 FSIDLADPTSKTAREFKQTNWGMMEEAGKP--NLSDFFPVLENLDLQGIRRRMTVYFGKMLDVFDRLIDQRLKQRQERDF 267 (298)
Q Consensus 190 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 267 (298)
||.+++..+++...++.+.+.++....+.. .+...+|++.+++ ....++..+..+.+.+++.++++++++..+.+..
T Consensus 158 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 236 (463)
T PF00067_consen 158 FGKDFGSLDDEDFEEFLEAFDELFELLSNFFWNLPFFFPWLKYLP-TPLFRRFKRARDRLRKYIKEIIEERREELDDGDE 236 (463)
T ss_dssp HSSHHHGTTHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHCTSS-HHHHHHHHHHHHHHHHHHHHHHHHHHHSHHSSSS
T ss_pred ccceeeecccccccccccccccccccccccccccccccccccccc-cccccccccccccccccccccccccccccccccc
Confidence 999887443434556777777766544221 1334677666664 2344566777789999999999999987776522
Q ss_pred CCCCCHHHHHhhcc-ccCCC-CCCHHhhhhhc
Q 040285 268 TESKDMLDALLKIC-EDKSV-EIDINDIKHLF 297 (298)
Q Consensus 268 ~~~~d~l~~lL~~~-~~~~~-~lt~~~i~~~~ 297 (298)
.+.|+++.+|.+. +++++ .+|+++|.+.+
T Consensus 237 -~~~d~l~~ll~~~~~~~~~~~ls~~~i~~~~ 267 (463)
T PF00067_consen 237 -SRRDLLDSLLQASSDSDGPSGLSDEEIAAEL 267 (463)
T ss_dssp -SCSSHHHHHHHHHHTTTTTSSSSHHHHHHHH
T ss_pred -ccccccccccccccccccccccccccccccc
Confidence 3479999999986 33333 69999998754
No 18
>PLN02987 Cytochrome P450, family 90, subfamily A
Probab=99.96 E-value=2.2e-28 Score=227.34 Aligned_cols=263 Identities=18% Similarity=0.220 Sum_probs=181.5
Q ss_pred HHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCCceecccCCCC-----CCchHHHHHHHHHhCCceEEecCCeeEEEec
Q 040285 8 PWLLFSWILVVALNYFSRGFKSGSRRLPPGPTPYPVIGNLLELG-----DKPHKSLAKLAKIHGPIMSLKFGQVTTVVFS 82 (298)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~pPgP~~~PilGnl~~l~-----~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~ 82 (298)
..++++.+|+.++.|+..+-+..+.++||||.++|++||++++. ++++..+.+|+++||++|++++|+.++|+++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~lppgp~~~P~iG~~~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~l~~~~~vvv~ 84 (472)
T PLN02987 5 AFLLLLSSLAAIFFLLLRRTRYRRMRLPPGSLGLPLVGETLQLISAYKTENPEPFIDERVARYGSLFMTHLFGEPTVFSA 84 (472)
T ss_pred HHHHHHHHHHHHHHHHHHhhccCCCCCcCCCcCCCchhhHHHHHhhcccCChHHHHHHHHHHhchhhhhhhcCCCeEEEe
Confidence 34455556677777777765566667899999999999998862 4588889999999999999999999999999
Q ss_pred CHHHHHHHHHhCCccccccCccccccccccCCCCcccCCCChhHHHHHHHHHhhcCChhHHhHhHHHHHHHHHHHHHHHH
Q 040285 83 SAAMAKEILQNQDTSFCNRTIPDAIYAHGHHEFGMPWLPVATLWRNLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQ 162 (298)
Q Consensus 83 ~~~~~~evL~~~~~~f~~Rp~~~~~~~~~~~~~~~~~~~~g~~Wk~~Rr~l~~~~f~~~~l~~~~~~~~~~~~~l~~~l~ 162 (298)
||++++++|+++...|++++.......+ |..++.+ .+|+.||++||++ ++.++.+.++.+ ..+++.++++...
T Consensus 85 ~pe~~~~il~~~~~~f~~~~~~~~~~~l--g~~~l~~-~~g~~wr~~R~~~-~~f~~~~~~~~~---~~~~~~~~~~~~~ 157 (472)
T PLN02987 85 DPETNRFILQNEGKLFECSYPGSISNLL--GKHSLLL-MKGNLHKKMHSLT-MSFANSSIIKDH---LLLDIDRLIRFNL 157 (472)
T ss_pred CHHHHHHHHhCCCceEEecCcHHHHHHh--Ccccccc-cCcHHHHHHHHHH-HHhcChHHHHHH---HHHHHHHHHHHHH
Confidence 9999999999999999876532223333 2245544 5899999999997 444444444333 2234445544322
Q ss_pred HHhhCCcceehHHHHHHHHHHHHHHHHhccCCCCCCchhHHHHHHHHHHHHHHhCCCCccccccccccCCcccHHHHHHH
Q 040285 163 ENCRAGTAIHIGQAAFDTTLNLISNTIFSIDLADPTSKTAREFKQTNWGMMEEAGKPNLSDFFPVLENLDLQGIRRRMTV 242 (298)
Q Consensus 163 ~~~~~~~~vd~~~~~~~~t~~ii~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~ 242 (298)
+.. ++++++.+.+.+++++++++++||.+.+.. .+.+...+....... ..+++|++ .+.+++..+
T Consensus 158 ~~~--~~~v~~~~~~~~~t~~vi~~~~fg~~~~~~----~~~~~~~~~~~~~~~----~~~~~p~l-----~~~~~~~~~ 222 (472)
T PLN02987 158 DSW--SSRVLLMEEAKKITFELTVKQLMSFDPGEW----TESLRKEYVLVIEGF----FSVPLPLF-----STTYRRAIQ 222 (472)
T ss_pred Hhh--ccceehHHHHHHHHHHHHHHHHcCCCChHH----HHHHHHHHHHHHhhh----hcCCCcCC-----CchHHHHHH
Confidence 211 247999999999999999999999865322 122222222222111 11234542 123466778
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcCCCCCCCCHHHHHhhccccCCCCCCHHhhhhhc
Q 040285 243 YFGKMLDVFDRLIDQRLKQRQERDFTESKDMLDALLKICEDKSVEIDINDIKHLF 297 (298)
Q Consensus 243 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~l~~lL~~~~~~~~~lt~~~i~~~~ 297 (298)
..+++.+++.++|+++++....+.. .++|+++.|++..+ .+++++|.+.+
T Consensus 223 ~~~~~~~~~~~~i~~r~~~~~~~~~-~~~d~l~~ll~~~~----~~~~~ei~~~~ 272 (472)
T PLN02987 223 ARTKVAEALTLVVMKRRKEEEEGAE-KKKDMLAALLASDD----GFSDEEIVDFL 272 (472)
T ss_pred HHHHHHHHHHHHHHHHHhhhhccCc-ccccHHHHHHhcCC----CCCHHHHHHHH
Confidence 8899999999999998765443321 24699999997542 38999888754
No 19
>PLN02196 abscisic acid 8'-hydroxylase
Probab=99.96 E-value=9.3e-28 Score=223.18 Aligned_cols=238 Identities=19% Similarity=0.211 Sum_probs=173.3
Q ss_pred cCCCCCCCCCCCCCceecccCCC-CCCchHHHHHHHHHhCCceEEecCCeeEEEecCHHHHHHHHHhCCccccccCcccc
Q 040285 28 KSGSRRLPPGPTPYPVIGNLLEL-GDKPHKSLAKLAKIHGPIMSLKFGQVTTVVFSSAAMAKEILQNQDTSFCNRTIPDA 106 (298)
Q Consensus 28 ~~~~~~~pPgP~~~PilGnl~~l-~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~~~~~~evL~~~~~~f~~Rp~~~~ 106 (298)
..++.+.||||+++|++||++++ .++++..+.+++++||++|++++|+.++|+++||+++++++.+++..|. +....
T Consensus 30 ~~~~~~~Ppgp~~~P~iG~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~v~~p~~~~~vl~~~~~~~~--~~~~~ 107 (463)
T PLN02196 30 SSTKLPLPPGTMGWPYVGETFQLYSQDPNVFFASKQKRYGSVFKTHVLGCPCVMISSPEAAKFVLVTKSHLFK--PTFPA 107 (463)
T ss_pred CCCCCCCCCCCCCCCccchHHHHHhcCHHHHHHHHHHHhhhhheeeecCCceEEEcCHHHHHHHHhCCCCccc--ccCch
Confidence 33445678999999999999876 5789999999999999999999999999999999999999998887773 33222
Q ss_pred c-cccccCCCCcccCCCChhHHHHHHHHHhhcCChhHHhHhHHHHHHHHHHHHHHHHHHhhCCcceehHHHHHHHHHHHH
Q 040285 107 I-YAHGHHEFGMPWLPVATLWRNLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGTAIHIGQAAFDTTLNLI 185 (298)
Q Consensus 107 ~-~~~~~~~~~~~~~~~g~~Wk~~Rr~l~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~t~~ii 185 (298)
. ... .+..++ +..+|+.|+++||++ ++.|++++++.+.+.++++++.+++.|. ++++|+.+.+..++++++
T Consensus 108 ~~~~~-~g~~~l-~~~~g~~w~~~Rk~l-~~~f~~~~l~~~~~~i~~~~~~~~~~~~-----~~~v~~~~~~~~~~~~v~ 179 (463)
T PLN02196 108 SKERM-LGKQAI-FFHQGDYHAKLRKLV-LRAFMPDAIRNMVPDIESIAQESLNSWE-----GTQINTYQEMKTYTFNVA 179 (463)
T ss_pred HHHHH-cCcccc-cccCcHHHHHHHHHH-HHhcChHHHHHHHHHHHHHHHHHHHcCC-----CCeEEeHHHHHHHHHHHH
Confidence 2 222 222344 556899999999999 6789999999999999999999988773 457999999999999999
Q ss_pred HHHHhccCCCCCCchhHHHHHHHHHHHHHHhCCCCccccccccccCCcccHHHHHHHHHHHHHHHHHHHHHHHHHhhhcC
Q 040285 186 SNTIFSIDLADPTSKTAREFKQTNWGMMEEAGKPNLSDFFPVLENLDLQGIRRRMTVYFGKMLDVFDRLIDQRLKQRQER 265 (298)
Q Consensus 186 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 265 (298)
+.++||.+.... ...+.+... .... ..+.+|+ .+|. ...++..+..+++.+++.++|+++++..
T Consensus 180 ~~~~fG~~~~~~----~~~~~~~~~----~~~~--~~~~~~~--~~p~-~~~~~~~~a~~~~~~~~~~~i~~~~~~~--- 243 (463)
T PLN02196 180 LLSIFGKDEVLY----REDLKRCYY----ILEK--GYNSMPI--NLPG-TLFHKSMKARKELAQILAKILSKRRQNG--- 243 (463)
T ss_pred HHHHcCCCCchH----HHHHHHHHH----HHhc--chhcccc--cCCC-ccchHHHHHHHHHHHHHHHHHHHHhhcC---
Confidence 999999875321 112222111 1111 0112342 2221 1124566777888889999888876532
Q ss_pred CCCCCCCHHHHHhhccccCCCCCCHHhhhhhc
Q 040285 266 DFTESKDMLDALLKICEDKSVEIDINDIKHLF 297 (298)
Q Consensus 266 ~~~~~~d~l~~lL~~~~~~~~~lt~~~i~~~~ 297 (298)
. .+.|+++.+++.. ..+++++|.+.+
T Consensus 244 ~--~~~d~l~~ll~~~----~~l~~~ei~~~~ 269 (463)
T PLN02196 244 S--SHNDLLGSFMGDK----EGLTDEQIADNI 269 (463)
T ss_pred C--CcccHHHHHHhcC----CCCCHHHHHHHH
Confidence 1 2369999998632 248888887654
No 20
>KOG0157 consensus Cytochrome P450 CYP4/CYP19/CYP26 subfamilies [Secondary metabolites biosynthesis, transport and catabolism; Lipid transport and metabolism]
Probab=99.96 E-value=4.1e-28 Score=226.61 Aligned_cols=256 Identities=21% Similarity=0.273 Sum_probs=188.8
Q ss_pred CCCCCCCCCCCceecccCCCC-C--CchHHHHHHHHHhCCceEEecCCeeEEEecCHHHHHHHHHhCCccccccCccc-c
Q 040285 31 SRRLPPGPTPYPVIGNLLELG-D--KPHKSLAKLAKIHGPIMSLKFGQVTTVVFSSAAMAKEILQNQDTSFCNRTIPD-A 106 (298)
Q Consensus 31 ~~~~pPgP~~~PilGnl~~l~-~--~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~~~~~~evL~~~~~~f~~Rp~~~-~ 106 (298)
+...||||++||++||++++. . .+...+.++..+||++|+.|+|+.++|+++||+.++++|.+....+..-+..+ .
T Consensus 33 ~~~~~~gp~~~P~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~dp~~~~~Il~~~~~~~~k~~~~~~~ 112 (497)
T KOG0157|consen 33 KKKLPPGPPGWPLIGNLLEFLKPLEEILDFVTELLSRYGPIFKTWLGGKPTVVTTDPELIEEILKSSNENYPKGPDYPES 112 (497)
T ss_pred HhccCCCCCCCCcccchHHhhcchhHHHHHHHHHHHHcCchhhhhhcCeeEEEEcCHHHHHHHHhcCcccCCCchhHHHH
Confidence 456799999999999999884 2 46678889999999999999999999999999999999976555554444333 3
Q ss_pred ccccccCCCCcccCCCChhHHHHHHHHHhhcCChhHHhHhHHHHHHHHHHHHHHHHHHhhCCcceehHHHHHHHHHHHHH
Q 040285 107 IYAHGHHEFGMPWLPVATLWRNLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGTAIHIGQAAFDTTLNLIS 186 (298)
Q Consensus 107 ~~~~~~~~~~~~~~~~g~~Wk~~Rr~l~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~t~~ii~ 186 (298)
...+.+ .|++++. |+.|+++||++ +++|+...++.+...+.+++..++..+.... .|+.+|+.+++.++|+|+||
T Consensus 113 ~~~~lG--~gll~~~-g~~W~~~Rk~~-~~~f~~~~L~~~~~~~~~~~~~~~~~~~~~~-~~~~vd~~~~~~~~tld~i~ 187 (497)
T KOG0157|consen 113 LKPWLG--DGLLFSD-GEKWHKHRKLL-TPAFHFEILKSFVPVFIESSLILLLLLELAA-SGEEVDLQDLLKRLTLDIIC 187 (497)
T ss_pred HHHHhc--CccccCC-chHHHHHHhhc-cHhhhHHHHHHHHHHHHHHHHHHHHHHHHhh-cCCeEcHHHHHHHHHHHHHH
Confidence 434422 3665654 99999999998 7999999999999999999999888877642 34449999999999999999
Q ss_pred HHHhccCCCCCCchhHHHHHHHHHHHHHHhCCCCcccccc-ccccCCcccHHHHHHHHHHHHHHHHHHHHHHHHHhhhcC
Q 040285 187 NTIFSIDLADPTSKTAREFKQTNWGMMEEAGKPNLSDFFP-VLENLDLQGIRRRMTVYFGKMLDVFDRLIDQRLKQRQER 265 (298)
Q Consensus 187 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P-~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 265 (298)
.++||......+.+...++.+++++....... ....| ...+++--+..++..++.+.+++++.++|++++++..++
T Consensus 188 ~~~~G~~~~~~~~~~~~~~~~a~~~~~~~~~~---~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~iI~~rr~~~~~~ 264 (497)
T KOG0157|consen 188 KTAMGPESLDAEGPELFEYVQAFDDLTELISK---RINLPLGTKFLYGLKSERKLKKARKILHDFLEKIIRERREELEKE 264 (497)
T ss_pred HHhcCCccccccCCcccHHHHHHHHHHHHHHH---HHcCchhhhHHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999333221223455777777765554432 11344 333333112567888999999999999999999766433
Q ss_pred CC---CCCCCHHHHHhhccccCCCCCCHHhhhhhc
Q 040285 266 DF---TESKDMLDALLKICEDKSVEIDINDIKHLF 297 (298)
Q Consensus 266 ~~---~~~~d~l~~lL~~~~~~~~~lt~~~i~~~~ 297 (298)
+. ....|+++.+....+ ..+|+++|++.+
T Consensus 265 ~~~~~~~~~d~L~~~~~~~~---~~l~~~~i~d~v 296 (497)
T KOG0157|consen 265 GSGEEKKRLDFLDTLLLEED---KPLTDEDIRDEV 296 (497)
T ss_pred CCcccchhhhHHHHHHHhcc---CCCCHHHHHHHH
Confidence 21 034688886333221 459999998875
No 21
>PLN02302 ent-kaurenoic acid oxidase
Probab=99.96 E-value=4.9e-27 Score=219.95 Aligned_cols=248 Identities=18% Similarity=0.209 Sum_probs=174.4
Q ss_pred cCCCCCCCCCCCCCceecccCCCC-----CCchHHHHHHHHHhCC--ceEEecCCeeEEEecCHHHHHHHHHhCCccccc
Q 040285 28 KSGSRRLPPGPTPYPVIGNLLELG-----DKPHKSLAKLAKIHGP--IMSLKFGQVTTVVFSSAAMAKEILQNQDTSFCN 100 (298)
Q Consensus 28 ~~~~~~~pPgP~~~PilGnl~~l~-----~~~~~~~~~~~~~yG~--i~~~~~g~~~~vvv~~~~~~~evL~~~~~~f~~ 100 (298)
..++.++||||+++|++||++++. ++++..+.+++++||+ +|++++|+.++|+++||+++++++.++ +.|.+
T Consensus 37 ~~~~~~lpPgp~~~PilG~l~~~~~~~~~~~~~~~~~~~~~kyG~~~i~~~~~~~~~~vvv~~pe~~~~vl~~~-~~f~~ 115 (490)
T PLN02302 37 GEGQPPLPPGDLGWPVIGNMWSFLRAFKSSNPDSFIASFISRYGRTGIYKAFMFGQPTVLVTTPEACKRVLTDD-DAFEP 115 (490)
T ss_pred ccCCCCCcCCCCCCCccccHHHHHHhcccCCcHHHHHHHHHHhCCCcceeeecCCCCeEEEcCHHHHHHHHcCC-Ccccc
Confidence 334457899999999999998762 4688899999999997 799999999999999999999999876 55665
Q ss_pred cCccccccccccCCCCcccCCCChhHHHHHHHHHhhcC-ChhHHhHhHHHHHHHHHHHHHHHHHHhhCCcceehHHHHHH
Q 040285 101 RTIPDAIYAHGHHEFGMPWLPVATLWRNLRKICNSHAF-SSRQLDANQHLRRKKIQDLLAYVQENCRAGTAIHIGQAAFD 179 (298)
Q Consensus 101 Rp~~~~~~~~~~~~~~~~~~~~g~~Wk~~Rr~l~~~~f-~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~ 179 (298)
+........+ +..+ .+..+|+.|+++||++ ++.| +++.++.+.+.+.++++.+++.+.+ ++.+|+.+.+..
T Consensus 116 ~~~~~~~~~~--g~~~-~~~~~g~~w~~~R~~~-~~~f~~~~~l~~~~~~i~~~v~~~~~~~~~----~~~v~~~~~~~~ 187 (490)
T PLN02302 116 GWPESTVELI--GRKS-FVGITGEEHKRLRRLT-AAPVNGPEALSTYIPYIEENVKSCLEKWSK----MGEIEFLTELRK 187 (490)
T ss_pred CCchhHHHHh--cccc-ccccCcHHHHHHHHHH-HhccCCHHHHHHHHHHHHHHHHHHHHHhcC----CCCEehHHHHHH
Confidence 4322222222 2222 3345799999999998 5677 5778899999999999999988743 346999999999
Q ss_pred HHHHHHHHHHhccCCCCCCchhHHHHHHHHHHHHHHhCCCCccccccccccCCcccHHHHHHHHHHHHHHHHHHHHHHHH
Q 040285 180 TTLNLISNTIFSIDLADPTSKTAREFKQTNWGMMEEAGKPNLSDFFPVLENLDLQGIRRRMTVYFGKMLDVFDRLIDQRL 259 (298)
Q Consensus 180 ~t~~ii~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 259 (298)
++++++++++||.+.+.. ...+...+........ .++. .+|.. ..++..+..+.+.+++.+.|++++
T Consensus 188 ~~~~vi~~~~~G~~~~~~----~~~~~~~~~~~~~~~~------~~~~--~~p~~-~~~~~~~~~~~l~~~~~~~i~~~~ 254 (490)
T PLN02302 188 LTFKIIMYIFLSSESELV----MEALEREYTTLNYGVR------AMAI--NLPGF-AYHRALKARKKLVALFQSIVDERR 254 (490)
T ss_pred HHHHHHHHHHcCCCChHH----HHHHHHHHHHHHHHhh------hCCc--CCCch-hhHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999865422 2233222222211110 1111 11211 123445567788889999999887
Q ss_pred HhhhcCCCCCCCCHHHHHhhccccCCCCCCHHhhhhhc
Q 040285 260 KQRQERDFTESKDMLDALLKICEDKSVEIDINDIKHLF 297 (298)
Q Consensus 260 ~~~~~~~~~~~~d~l~~lL~~~~~~~~~lt~~~i~~~~ 297 (298)
+...++.....+|+++.|+++.++++..+++++|.+.+
T Consensus 255 ~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~i~~~~ 292 (490)
T PLN02302 255 NSRKQNISPRKKDMLDLLLDAEDENGRKLDDEEIIDLL 292 (490)
T ss_pred HhhhccCCCCcCCHHHHHHhhhccCCCCCCHHHHHHHH
Confidence 65433211034799999998765444468999887754
No 22
>PLN02774 brassinosteroid-6-oxidase
Probab=99.96 E-value=1.4e-27 Score=222.09 Aligned_cols=242 Identities=15% Similarity=0.148 Sum_probs=174.3
Q ss_pred CCCCCCCCCCCCCceecccCCCCCCchHHHHHHHHHhCCceEEecCCeeEEEecCHHHHHHHHHhCCccccccCcccccc
Q 040285 29 SGSRRLPPGPTPYPVIGNLLELGDKPHKSLAKLAKIHGPIMSLKFGQVTTVVFSSAAMAKEILQNQDTSFCNRTIPDAIY 108 (298)
Q Consensus 29 ~~~~~~pPgP~~~PilGnl~~l~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~~~~~~evL~~~~~~f~~Rp~~~~~~ 108 (298)
+++++.||||+++|++||++.+.++++..+.+|+++||++|++++|+.++|+++||++++++|.+++..|..+.......
T Consensus 27 ~~r~~~ppgp~~~P~~G~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~~~~~~~~~ 106 (463)
T PLN02774 27 YSKKGLPPGTMGWPLFGETTEFLKQGPDFMKNQRLRYGSFFKSHILGCPTIVSMDPELNRYILMNEGKGLVPGYPQSMLD 106 (463)
T ss_pred cCCCCCCCCCCCCCchhhHHHHHHhhHHHHHHHHHHhccCccceecCCCeEEEeCHHHHHHHHcCCCCeEEecCCHHHHH
Confidence 34456799999999999998776667788999999999999999999999999999999999998888775442222222
Q ss_pred ccccCCCCcccCCCChhHHHHHHHHHhhcCChhHHhH-hHHHHHHHHHHHHHHHHHHhhCCcceehHHHHHHHHHHHHHH
Q 040285 109 AHGHHEFGMPWLPVATLWRNLRKICNSHAFSSRQLDA-NQHLRRKKIQDLLAYVQENCRAGTAIHIGQAAFDTTLNLISN 187 (298)
Q Consensus 109 ~~~~~~~~~~~~~~g~~Wk~~Rr~l~~~~f~~~~l~~-~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~t~~ii~~ 187 (298)
.+ + ..++ +..+|+.|+++||++ +++|+++.++. +.+.+.+.++.+++.|. .++++|+.+.+..++++++++
T Consensus 107 ~l-g-~~~~-~~~~g~~w~~~R~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~v~~~~~~~~~~~~~~~~ 178 (463)
T PLN02774 107 IL-G-TCNI-AAVHGSTHRYMRGSL-LSLISPTMIRDHLLPKIDEFMRSHLSGWD----GLKTIDIQEKTKEMALLSALK 178 (463)
T ss_pred Hh-C-ccch-hhcCCHHHHHHHHHH-HHhcCHHHHHHHHHHHHHHHHHHHHHhhC----CCCCEEeeHHHHHHHHHHHHH
Confidence 23 2 2244 456899999999998 68899988875 68888888888877663 245799999999999999999
Q ss_pred HHhccCCCCCCchhHHHHHHHHHHHHHHhCCCCccccccccccCCcccHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCC
Q 040285 188 TIFSIDLADPTSKTAREFKQTNWGMMEEAGKPNLSDFFPVLENLDLQGIRRRMTVYFGKMLDVFDRLIDQRLKQRQERDF 267 (298)
Q Consensus 188 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 267 (298)
++||.+.+.. ...+...+..... +. . .+|. ++|.. ..++..+..+.+.+++.+.|+++++.. .
T Consensus 179 ~~~g~~~~~~----~~~~~~~~~~~~~--~~--~--~~~~--~lp~~-~~~~~~~~~~~~~~~~~~~i~~r~~~~---~- 241 (463)
T PLN02774 179 QIAGTLSKPI----SEEFKTEFFKLVL--GT--L--SLPI--DLPGT-NYRSGVQARKNIVRMLRQLIQERRASG---E- 241 (463)
T ss_pred HHcCCCChHH----HHHHHHHHHHHhc--cc--c--cCCc--CCCCh-hhhHHHHHHHHHHHHHHHHHHHHHhcC---C-
Confidence 9999764321 2233322222211 11 1 2221 33321 234566678888899999998876431 2
Q ss_pred CCCCCHHHHHhhccccCCCCCCHHhhhhhc
Q 040285 268 TESKDMLDALLKICEDKSVEIDINDIKHLF 297 (298)
Q Consensus 268 ~~~~d~l~~lL~~~~~~~~~lt~~~i~~~~ 297 (298)
.++|+++.|+.... ++..+|+++|.+.+
T Consensus 242 -~~~d~l~~ll~~~~-~~~~~s~~ei~~~~ 269 (463)
T PLN02774 242 -THTDMLGYLMRKEG-NRYKLTDEEIIDQI 269 (463)
T ss_pred -CcccHHHHHHhCcc-CCCCCCHHHHHHHH
Confidence 24799999997432 23358999988764
No 23
>PLN02169 fatty acid (omega-1)-hydroxylase/midchain alkane hydroxylase
Probab=99.96 E-value=3.4e-27 Score=221.11 Aligned_cols=256 Identities=15% Similarity=0.161 Sum_probs=175.4
Q ss_pred CCCCCCCCCceecccCCCCCCchHHHHHHHH----HhCCceE---EecCCeeEEEecCHHHHHHHHHhCCccccccCccc
Q 040285 33 RLPPGPTPYPVIGNLLELGDKPHKSLAKLAK----IHGPIMS---LKFGQVTTVVFSSAAMAKEILQNQDTSFCNRTIPD 105 (298)
Q Consensus 33 ~~pPgP~~~PilGnl~~l~~~~~~~~~~~~~----~yG~i~~---~~~g~~~~vvv~~~~~~~evL~~~~~~f~~Rp~~~ 105 (298)
+..|||++||++||++++..+... +.+|.. +||..++ .|+|+.|+|+++||+++++||+++...|.+++...
T Consensus 31 ~~~p~p~~~pl~G~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~g~~~~vvv~dpe~i~~il~~~~~~~~k~~~~~ 109 (500)
T PLN02169 31 HGQPILKNWPFLGMLPGMLHQIPR-IYDWTVEVLEASNLTFYFKGPWLSGTDMLFTADPKNIHHILSSNFGNYPKGPEFK 109 (500)
T ss_pred CCCCCCCCCCcccchHHHHHccCc-HHHHHHHHHHhCCCcEEEEeeccCCCCeEEEcCHHHHHHHHhhCcccCCCcHHHH
Confidence 358999999999999776322222 444444 4886555 78899999999999999999999888888775322
Q ss_pred cccccccCCCCcccCCCChhHHHHHHHHHhhcCChhHHhH--hHHHHHHHHHHHHHHHHHHhhCCcceehHHHHHHHHHH
Q 040285 106 AIYAHGHHEFGMPWLPVATLWRNLRKICNSHAFSSRQLDA--NQHLRRKKIQDLLAYVQENCRAGTAIHIGQAAFDTTLN 183 (298)
Q Consensus 106 ~~~~~~~~~~~~~~~~~g~~Wk~~Rr~l~~~~f~~~~l~~--~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~t~~ 183 (298)
....+ . +.|+ +.++|+.||++||++ +|+|+.++++. +.+.+.++++.+++.+++.+.+|+++|+.+.+.++|+|
T Consensus 110 ~~~~~-~-g~gl-~~~~g~~Wr~~Rk~l-~p~F~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~t~d 185 (500)
T PLN02169 110 KIFDV-L-GEGI-LTVDFELWEDLRKSN-HALFHNQDFIELSLSSNKSKLKEGLVPFLDNAAHENIIIDLQDVFMRFMFD 185 (500)
T ss_pred HHHHh-h-cCcc-cccCcHHHHHHHHHH-HHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEeHHHHHHHHHHH
Confidence 22222 1 2465 446799999999998 79999887653 34777788899999998755456789999999999999
Q ss_pred HHHHHHhccCCCCCCch-hHHHHHHHHHHHHHHhCCCCcccccccc-----ccCCcccHHHHHHHHHHHHHHHHHHHHHH
Q 040285 184 LISNTIFSIDLADPTSK-TAREFKQTNWGMMEEAGKPNLSDFFPVL-----ENLDLQGIRRRMTVYFGKMLDVFDRLIDQ 257 (298)
Q Consensus 184 ii~~~~fG~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~P~l-----~~l~~~~~~~~~~~~~~~~~~~~~~~i~~ 257 (298)
+||+++||.+.+..+.. ...++..++......... .++.|++ .+++ .+..++..+..+.+++++.++|++
T Consensus 186 vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~I~~ 261 (500)
T PLN02169 186 TSSILMTGYDPMSLSIEMLEVEFGEAADIGEEAIYY---RHFKPVILWRLQNWIG-IGLERKMRTALATVNRMFAKIISS 261 (500)
T ss_pred HHHhheeCCCccccCCCCCCCHHHHHHHHHHHHHHh---HHhccHHHHHHHHHhC-CchhhHHHHHHHHHHHHHHHHHHH
Confidence 99999999987543211 123454444443322211 1123321 1222 234566778889999999999999
Q ss_pred HHHhhhcC-C-CCCCCCHHHHHhhccccC---CCCCCHHhhhhhc
Q 040285 258 RLKQRQER-D-FTESKDMLDALLKICEDK---SVEIDINDIKHLF 297 (298)
Q Consensus 258 ~~~~~~~~-~-~~~~~d~l~~lL~~~~~~---~~~lt~~~i~~~~ 297 (298)
++++..+. + ....+|+++.|+++.+++ +..+++++|++.+
T Consensus 262 r~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~i~~~~ 306 (500)
T PLN02169 262 RRKEEISRAETEPYSKDALTYYMNVDTSKYKLLKPKKDKFIRDVI 306 (500)
T ss_pred HHHHhhccccccCCCcCHHHHHHhccccccccccCCChHHHHHHH
Confidence 87653211 1 002369999999865321 1247888887754
No 24
>PLN03195 fatty acid omega-hydroxylase; Provisional
Probab=99.95 E-value=7.5e-27 Score=219.98 Aligned_cols=254 Identities=16% Similarity=0.201 Sum_probs=175.5
Q ss_pred CCCCCCCCceecccCCCCCCchHHHHHHHHHh---CCceEEecCCeeEEEecCHHHHHHHHHhCCccccccCccc-cccc
Q 040285 34 LPPGPTPYPVIGNLLELGDKPHKSLAKLAKIH---GPIMSLKFGQVTTVVFSSAAMAKEILQNQDTSFCNRTIPD-AIYA 109 (298)
Q Consensus 34 ~pPgP~~~PilGnl~~l~~~~~~~~~~~~~~y---G~i~~~~~g~~~~vvv~~~~~~~evL~~~~~~f~~Rp~~~-~~~~ 109 (298)
.+|||+++|++||++++.+ ++..+.+|.++| |++|++++|+.++|+++||+++++++.++...|..++... ....
T Consensus 31 ~~pgp~~~p~~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~~~~~~~~~~~ 109 (516)
T PLN03195 31 NRKGPKSWPIIGAALEQLK-NYDRMHDWLVEYLSKDRTVVVKMPFTTYTYIADPVNVEHVLKTNFANYPKGEVYHSYMEV 109 (516)
T ss_pred ccCCCCCCCeecchHHHHh-ccchHHHHHHHHhccCCcEEEeeCCCCceEecCHHHHHHHHhhCccccCCcHhHHHHHHH
Confidence 4899999999999876533 245678888888 8999999999999999999999999998766676553211 1112
Q ss_pred cccCCCCcccCCCChhHHHHHHHHHhhcCChhHHhHhHHHH-HHHHHHHHHHHHHHhhCCcceehHHHHHHHHHHHHHHH
Q 040285 110 HGHHEFGMPWLPVATLWRNLRKICNSHAFSSRQLDANQHLR-RKKIQDLLAYVQENCRAGTAIHIGQAAFDTTLNLISNT 188 (298)
Q Consensus 110 ~~~~~~~~~~~~~g~~Wk~~Rr~l~~~~f~~~~l~~~~~~~-~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~t~~ii~~~ 188 (298)
+ . +.++ +..+|+.|+++||++ ++.|+.+.++.+.+.+ .+.++.+++.+++...+|+++|+.+.+..+++|+|+.+
T Consensus 110 ~-~-g~~l-~~~~g~~w~~~Rr~l-~~~fs~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~dvi~~~ 185 (516)
T PLN03195 110 L-L-GDGI-FNVDGELWRKQRKTA-SFEFASKNLRDFSTVVFREYSLKLSSILSQASFANQVVDMQDLFMRMTLDSICKV 185 (516)
T ss_pred H-h-cCee-eccCcHHHHHHHHhc-chhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEcHHHHHHHHHHHHHHHH
Confidence 2 1 2344 556899999999998 7889999999999876 55567777777654334678999999999999999999
Q ss_pred HhccCCCCCCch-hHHHHHHHHHHHHHHhCCCCcccccccc--c-cCCcccHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 040285 189 IFSIDLADPTSK-TAREFKQTNWGMMEEAGKPNLSDFFPVL--E-NLDLQGIRRRMTVYFGKMLDVFDRLIDQRLKQRQE 264 (298)
Q Consensus 189 ~fG~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~P~l--~-~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 264 (298)
+||.+++..++. ....+.+.++........ .. +.|++ . +++ .+..++..+....+.+++.+++++++++..+
T Consensus 186 ~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 261 (516)
T PLN03195 186 GFGVEIGTLSPSLPENPFAQAFDTANIIVTL-RF--IDPLWKLKKFLN-IGSEALLSKSIKVVDDFTYSVIRRRKAEMDE 261 (516)
T ss_pred HhCCCccccccCCCccHHHHHHHHHHHHHHH-HH--hcchhhHHHhcc-cchHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 999988653211 112344444433322110 00 11211 1 111 1223445566778888999999988765432
Q ss_pred C----CCCCCCCHHHHHhhccccCCCCCCHHhhhhhc
Q 040285 265 R----DFTESKDMLDALLKICEDKSVEIDINDIKHLF 297 (298)
Q Consensus 265 ~----~~~~~~d~l~~lL~~~~~~~~~lt~~~i~~~~ 297 (298)
+ +. ..+|+++.|+++.++++..+++++|.+.+
T Consensus 262 ~~~~~~~-~~~d~l~~ll~~~~~~~~~l~~~~i~~~~ 297 (516)
T PLN03195 262 ARKSGKK-VKHDILSRFIELGEDPDSNFTDKSLRDIV 297 (516)
T ss_pred ccccccc-ccccHHHHHHhccCCCCCCCCHHHHHHHH
Confidence 1 11 24699999998654333459999988764
No 25
>PLN03141 3-epi-6-deoxocathasterone 23-monooxygenase; Provisional
Probab=99.95 E-value=8.7e-27 Score=216.10 Aligned_cols=245 Identities=17% Similarity=0.248 Sum_probs=171.1
Q ss_pred CCCCCCCCCCCCCceecccCCCC-----CCchHHHHHHHHHhCCceEEecCCeeEEEecCHHHHHHHHHhCCccccccCc
Q 040285 29 SGSRRLPPGPTPYPVIGNLLELG-----DKPHKSLAKLAKIHGPIMSLKFGQVTTVVFSSAAMAKEILQNQDTSFCNRTI 103 (298)
Q Consensus 29 ~~~~~~pPgP~~~PilGnl~~l~-----~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~~~~~~evL~~~~~~f~~Rp~ 103 (298)
.++.++||||+++|++||++++. ++++..+.+|+++||++|++++|+.++||++||++++|+|.+++..|++|..
T Consensus 3 ~~~~~~Ppg~~~~P~iG~~~~l~~~~~~~~~~~~~~~~~~~yG~i~~~~lg~~~~vvv~~p~~~~~vl~~~~~~~~~~~~ 82 (452)
T PLN03141 3 KKKSRLPKGSLGWPVIGETLDFISCAYSSRPESFMDKRRSLYGKVFKSHIFGTPTIVSTDAEVNKVVLQSDGNAFVPAYP 82 (452)
T ss_pred CCCCCCCCCCCCCCchhhHHHHHhhcccCChHHHHHHHHHHhhheeeeccCCCCEEEEeCHHHhhHHHhCCCCeeeccCc
Confidence 34567899999999999998872 3588899999999999999999999999999999999999999999987742
Q ss_pred cccccccccCCCCcccCCCChhHHHHHHHHHhhcCChhHHhHh-HHHHHHHHHHHHHHHHHHhhCCcceehHHHHHHHHH
Q 040285 104 PDAIYAHGHHEFGMPWLPVATLWRNLRKICNSHAFSSRQLDAN-QHLRRKKIQDLLAYVQENCRAGTAIHIGQAAFDTTL 182 (298)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~g~~Wk~~Rr~l~~~~f~~~~l~~~-~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~t~ 182 (298)
. ....+ .|..++ +..+|+.||++|+++ ++.|++..+..+ .+.+.+.++.+++.+ ..++++|+.+.+..+++
T Consensus 83 ~-~~~~l-~g~~~~-~~~~g~~wr~~r~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~ 154 (452)
T PLN03141 83 K-SLTEL-MGKSSI-LLINGSLQRRVHGLI-GAFLKSPHLKAQITRDMERYVSESLDSW----RDDPPVLVQDETKKIAF 154 (452)
T ss_pred h-hHHHH-hCcccc-cccCcHHHHHHHHHH-HHhcCcHHHHHHHHHHHHHHHHHHHHhc----cCCCCEEhHHHHHHHHH
Confidence 2 22223 222344 446899999999998 677877666543 344444444444443 23568999999999999
Q ss_pred HHHHHHHhccCCCCCCchhHHHHHHHHHHHHHHhCCCCccccccccccCCcccHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 040285 183 NLISNTIFSIDLADPTSKTAREFKQTNWGMMEEAGKPNLSDFFPVLENLDLQGIRRRMTVYFGKMLDVFDRLIDQRLKQR 262 (298)
Q Consensus 183 ~ii~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 262 (298)
++|++++||.+... +..++...+........ .+|+ ++|... .++..+..+++.+++.++|+++++..
T Consensus 155 ~vi~~~~~G~~~~~----~~~~~~~~~~~~~~~~~------~~~~--~~p~~~-~~~~~~~~~~l~~~~~~~i~~~~~~~ 221 (452)
T PLN03141 155 EVLVKALISLEPGE----EMEFLKKEFQEFIKGLM------SLPI--KLPGTR-LYRSLQAKKRMVKLVKKIIEEKRRAM 221 (452)
T ss_pred HHHHHHHcCCCchH----HHHHHHHHHHHHhhhHH------hCcc--CCCchH-hHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999976532 23344333333332211 2232 222111 23455678899999999999887654
Q ss_pred hcCCC---CCCCCHHHHHhhccccCCCCCCHHhhhhhc
Q 040285 263 QERDF---TESKDMLDALLKICEDKSVEIDINDIKHLF 297 (298)
Q Consensus 263 ~~~~~---~~~~d~l~~lL~~~~~~~~~lt~~~i~~~~ 297 (298)
+.+.. ..++|+++.++++. +..+++++|.+.+
T Consensus 222 ~~~~~~~~~~~~d~l~~ll~~~---~~~l~~~~i~~~~ 256 (452)
T PLN03141 222 KNKEEDETGIPKDVVDVLLRDG---SDELTDDLISDNM 256 (452)
T ss_pred hccCccccCChhhHHHHHHhcC---CCCCCHHHHHHHH
Confidence 33210 01369999999754 2358999887754
No 26
>PLN02936 epsilon-ring hydroxylase
Probab=99.94 E-value=1.7e-25 Score=209.28 Aligned_cols=255 Identities=19% Similarity=0.244 Sum_probs=183.7
Q ss_pred CCCCCCCCCCceecccCCC-----CCCchHHHHHHHHHhCCceEEecCCeeEEEecCHHHHHHHHHhCCccccccCcccc
Q 040285 32 RRLPPGPTPYPVIGNLLEL-----GDKPHKSLAKLAKIHGPIMSLKFGQVTTVVFSSAAMAKEILQNQDTSFCNRTIPDA 106 (298)
Q Consensus 32 ~~~pPgP~~~PilGnl~~l-----~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~~~~~~evL~~~~~~f~~Rp~~~~ 106 (298)
.++--|-.|||++|+.++. ++.++..+.+|+++||++|++++|+.++|+++||+++++++.+.+..|.+++....
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~pe~~~~il~~~~~~f~~~~~~~~ 90 (489)
T PLN02936 11 NRLWGDDSGIPVADAKLEDVTDLLGGALFLPLFKWMNEYGPVYRLAAGPRNFVVVSDPAIAKHVLRNYGSKYAKGLVAEV 90 (489)
T ss_pred hccCCCCCCCccHHhHHhhHHHHhccHHHHHHHHHHHHcCCEEEEccCCccEEEEcCHHHHHHHHHhccccccCcchhhh
Confidence 3456788999999988765 25688999999999999999999999999999999999999988888988754322
Q ss_pred ccccccCCCCcccCCCChhHHHHHHHHHhhcCChhHHhHhHH-HHHHHHHHHHHHHHHHhhCCcceehHHHHHHHHHHHH
Q 040285 107 IYAHGHHEFGMPWLPVATLWRNLRKICNSHAFSSRQLDANQH-LRRKKIQDLLAYVQENCRAGTAIHIGQAAFDTTLNLI 185 (298)
Q Consensus 107 ~~~~~~~~~~~~~~~~g~~Wk~~Rr~l~~~~f~~~~l~~~~~-~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~t~~ii 185 (298)
...+ .+ .++ +..+|+.||++||++ ++.|+.+.++++.+ ++.++++.+++.|.+...+|+++|+.+.+..+++|+|
T Consensus 91 ~~~~-~~-~~i-~~~~g~~wk~~Rk~l-~~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~g~~vd~~~~~~~~~~dvi 166 (489)
T PLN02936 91 SEFL-FG-SGF-AIAEGELWTARRRAV-VPSLHRRYLSVMVDRVFCKCAERLVEKLEPVALSGEAVNMEAKFSQLTLDVI 166 (489)
T ss_pred hHHH-hc-Ccc-ccCCchHHHHHHHhh-cCccCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceeHHHHHHHHHHHHH
Confidence 2222 22 344 446799999999998 78999888887754 7889999999999876545679999999999999999
Q ss_pred HHHHhccCCCCCCchhHHHHHHHHHHHHHHhCCCCcccccccccc--CC-cccHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 040285 186 SNTIFSIDLADPTSKTAREFKQTNWGMMEEAGKPNLSDFFPVLEN--LD-LQGIRRRMTVYFGKMLDVFDRLIDQRLKQR 262 (298)
Q Consensus 186 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~--l~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 262 (298)
+.++||.+++..+. + .++...+...+..... ...+++|++.+ +. +.+..++..+..+.+++++.++++++++..
T Consensus 167 ~~~~fG~~~~~~~~-~-~~~~~~~~~~~~~~~~-~~~~~~p~~~~~~l~~~~p~~~~~~~~~~~i~~~~~~~i~~~~~~~ 243 (489)
T PLN02936 167 GLSVFNYNFDSLTT-D-SPVIQAVYTALKEAET-RSTDLLPYWKVDFLCKISPRQIKAEKAVTVIRETVEDLVDKCKEIV 243 (489)
T ss_pred HHHHcCCCcccccc-C-cHHHHHHHHHHHHHHH-hhhccchHHhhHHHhccChhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999876422 1 2344444433332211 11224443321 11 123345667778888899999998877543
Q ss_pred hcCC---------CCCCCCHHHHHhhccccCCCCCCHHhhhhhc
Q 040285 263 QERD---------FTESKDMLDALLKICEDKSVEIDINDIKHLF 297 (298)
Q Consensus 263 ~~~~---------~~~~~d~l~~lL~~~~~~~~~lt~~~i~~~~ 297 (298)
+... .....|+++.|++..+ .+++++|.+.+
T Consensus 244 ~~~~~~~~~~~~~~~~~~d~l~~ll~~~~----~~~~~~i~~~~ 283 (489)
T PLN02936 244 EAEGEVIEGEEYVNDSDPSVLRFLLASRE----EVSSVQLRDDL 283 (489)
T ss_pred hhcccccccccccccCchHHHHHHHhccc----cCCHHHHHHHH
Confidence 2110 0023589999997543 38888887654
No 27
>PLN02738 carotene beta-ring hydroxylase
Probab=99.92 E-value=7.5e-24 Score=202.57 Aligned_cols=242 Identities=17% Similarity=0.262 Sum_probs=169.2
Q ss_pred eecccCCC-CCCchHHHHHHHHHhCCceEEecCCeeEEEecCHHHHHHHHHhCCccccccCccccccccccCCCCcccCC
Q 040285 43 VIGNLLEL-GDKPHKSLAKLAKIHGPIMSLKFGQVTTVVFSSAAMAKEILQNQDTSFCNRTIPDAIYAHGHHEFGMPWLP 121 (298)
Q Consensus 43 ilGnl~~l-~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~~~~~~evL~~~~~~f~~Rp~~~~~~~~~~~~~~~~~~~ 121 (298)
.+||+..+ ++..+..+.+|+++|||||++++|+.++|+++||+.+++++.+++..|.+++.......+ . +.++ +..
T Consensus 141 ~~G~l~~i~~g~~~~~l~~lh~kYGpI~ri~lGp~~~vvIsDpe~i~eIl~~~~~~f~k~~~~~~~~~~-~-g~~l-~~~ 217 (633)
T PLN02738 141 AKGSISAVRGEAFFIPLYELFLTYGGIFRLTFGPKSFLIVSDPSIAKHILRDNSKAYSKGILAEILEFV-M-GKGL-IPA 217 (633)
T ss_pred ccCcHHHhcCchHHHHHHHHHHHhCCEEEEEeCCCCEEEECCHHHHHHHHhhCcccCCCcchHHHHhhc-c-CCce-ecC
Confidence 36777666 466789999999999999999999999999999999999999888788877532222222 1 2354 446
Q ss_pred CChhHHHHHHHHHhhcCChhHHhHhHHHHHHHHHHHHHHHHHHhhCCcceehHHHHHHHHHHHHHHHHhccCCCCCCchh
Q 040285 122 VATLWRNLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGTAIHIGQAAFDTTLNLISNTIFSIDLADPTSKT 201 (298)
Q Consensus 122 ~g~~Wk~~Rr~l~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~t~~ii~~~~fG~~~~~~~~~~ 201 (298)
+|+.||++||++ ++.|+.+.++.+.+.+.++++.++++|++..+.|+++|+.+.+..+|+|+|+.++||.+++...++
T Consensus 218 dge~wr~rRr~l-~p~Fs~~~v~~l~~~i~~~v~~L~~~L~~~~~~g~~vdl~~~~~~lt~DVI~~~~FG~~~~~~~~~- 295 (633)
T PLN02738 218 DGEIWRVRRRAI-VPALHQKYVAAMISLFGQASDRLCQKLDAAASDGEDVEMESLFSRLTLDIIGKAVFNYDFDSLSND- 295 (633)
T ss_pred CcHHHHHHHHhc-cHhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEeHHHHHHHHHHHHHHHHHhCCCccccccc-
Confidence 899999999998 789999999999999999999999999876555789999999999999999999999998753221
Q ss_pred HHHHHHHHHHHHHHh----CCCCccccccccccCCcccHHHHHHHHHHHHHHHHHHHHHHHHHhhhc---------CCCC
Q 040285 202 AREFKQTNWGMMEEA----GKPNLSDFFPVLENLDLQGIRRRMTVYFGKMLDVFDRLIDQRLKQRQE---------RDFT 268 (298)
Q Consensus 202 ~~~~~~~~~~~~~~~----~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~---------~~~~ 268 (298)
..+.+.+...+... ....+...+|.+..+ +++.++..+..+.+.+++.++++.+++..+. ...
T Consensus 296 -~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l--~~~~~~~~~~~~~l~~~~~~li~~~~~~~~~~~~~~~~~~~~~- 371 (633)
T PLN02738 296 -TGIVEAVYTVLREAEDRSVSPIPVWEIPIWKDI--SPRQRKVAEALKLINDTLDDLIAICKRMVEEEELQFHEEYMNE- 371 (633)
T ss_pred -hHHHHHHHHHHHHHHHHhhcchhhhhhhHHhhh--chHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhccccc-
Confidence 12333333332211 111111123333222 2333455555666677777777655432111 011
Q ss_pred CCCCHHHHHhhccccCCCCCCHHhhhhhc
Q 040285 269 ESKDMLDALLKICEDKSVEIDINDIKHLF 297 (298)
Q Consensus 269 ~~~d~l~~lL~~~~~~~~~lt~~~i~~~~ 297 (298)
...|+++.|+++. .++|+++|.+.+
T Consensus 372 ~~~dil~~Ll~~~----~~ls~~~L~~e~ 396 (633)
T PLN02738 372 RDPSILHFLLASG----DDVSSKQLRDDL 396 (633)
T ss_pred ccchHHHHHHHcC----CCCCHHHHHHHH
Confidence 2358999999753 248888887654
No 28
>KOG0159 consensus Cytochrome P450 CYP11/CYP12/CYP24/CYP27 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.88 E-value=5.3e-21 Score=172.24 Aligned_cols=226 Identities=18% Similarity=0.285 Sum_probs=181.2
Q ss_pred CCCCCCCCceecccCCCC----CCchHHHHHHHHHhCCceEEe-cCCeeEEEecCHHHHHHHHHhCCccccccC-ccccc
Q 040285 34 LPPGPTPYPVIGNLLELG----DKPHKSLAKLAKIHGPIMSLK-FGQVTTVVFSSAAMAKEILQNQDTSFCNRT-IPDAI 107 (298)
Q Consensus 34 ~pPgP~~~PilGnl~~l~----~~~~~~~~~~~~~yG~i~~~~-~g~~~~vvv~~~~~~~evL~~~~~~f~~Rp-~~~~~ 107 (298)
-.|||+++|++|.+..+. .+.|+.....+++||+||+.. +|+.+.|.+.+|+.++.++...+. +.-|| ....+
T Consensus 51 ~IP~p~~~~~l~~l~~~~~~~~~~lh~~~~~~~~~YG~I~~~~~~G~~~~V~v~~p~d~E~v~r~EG~-~P~Rp~~~~~w 129 (519)
T KOG0159|consen 51 EIPGPKGLPFLGLLWIWRAGGATKLHQHIVQLHQKYGPIFREGMLGRVDLVHVYNPDDVEKVFRNEGK-YPFRPLLIEPW 129 (519)
T ss_pred hcCCCCCccHHHHHHHHHhhhhhHHHHHHHHHHHHcCceeeeccCCCCCeEEeeCHHHHHHHHhcCCC-CCCcccccchh
Confidence 469999999999998542 568899999999999999999 999999999999999999987664 46675 22222
Q ss_pred ---cccccCCCCcccCCCChhHHHHHHHHHhhcCChhHHhHhHHHHHHHHHHHHHHHHHHhhC--C-cceehHHHHHHHH
Q 040285 108 ---YAHGHHEFGMPWLPVATLWRNLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRA--G-TAIHIGQAAFDTT 181 (298)
Q Consensus 108 ---~~~~~~~~~~~~~~~g~~Wk~~Rr~l~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~--~-~~vd~~~~~~~~t 181 (298)
+...++..|+ +..+|+.|++.|+.++..+++++.++.|.+.+++.++.++..+++..+. + -+-|+.+.+.+++
T Consensus 130 ~~~rd~~~~~~Gl-~~~~G~~W~~~Rs~ln~~ll~P~~v~~yl~~l~~V~~DF~~~l~~~r~~~~~~~~~D~~~~l~~ws 208 (519)
T KOG0159|consen 130 VAYRDFRGGVCGL-FLLEGPEWQRLRSALNPLLLQPQAVRRYLPQLNAVSDDFVERLRAQRDPERGELVPDFAQELYRWS 208 (519)
T ss_pred hhhHHhhccCCCc-ccCCCHHHHHHHHHhchhhcCHHHHHHHhhHHHHHHHHHHHHHHHHhcccccccchhHHHHHHHHH
Confidence 2222233454 5578999999999997777999999999999999999999999987642 2 3889999999999
Q ss_pred HHHHHHHHhccCCCCCC---chhHHHHHHHHHHHHHHhCCCCcccccc-ccccCCcccHHHHHHHHHHHHHHHHHHHHHH
Q 040285 182 LNLISNTIFSIDLADPT---SKTAREFKQTNWGMMEEAGKPNLSDFFP-VLENLDLQGIRRRMTVYFGKMLDVFDRLIDQ 257 (298)
Q Consensus 182 ~~ii~~~~fG~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~P-~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~ 257 (298)
+..||.++||++..... +++...|.+++..++..... .++.| ++++++ ++.++++.+..+.+.++.+++|++
T Consensus 209 lEsi~~V~l~~rlG~L~~~~~~~a~~fi~ai~~~F~~s~~---l~~~p~l~r~~~-t~~wk~~~~~~D~i~~~~~~~Id~ 284 (519)
T KOG0159|consen 209 LESICLVLLGTRLGLLGESPPSEAQQFIDAIKKMFESSAQ---LMLMPSLWRYFP-TKVWKDFVRAWDQIFDVGDKYIDN 284 (519)
T ss_pred HHHHHHHHHhcccccccCCCCHHHHHHHHHHHHHHHhHHH---HHhcchHHHhCC-ChHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999987533 35788999999999887654 22444 556664 345678888999999999999998
Q ss_pred HHHhhhcC
Q 040285 258 RLKQRQER 265 (298)
Q Consensus 258 ~~~~~~~~ 265 (298)
..+..+..
T Consensus 285 ~l~~l~~~ 292 (519)
T KOG0159|consen 285 ALEELEKQ 292 (519)
T ss_pred HHHHHHhc
Confidence 88766543
No 29
>PLN02426 cytochrome P450, family 94, subfamily C protein
Probab=99.84 E-value=2e-19 Score=168.68 Aligned_cols=230 Identities=14% Similarity=0.112 Sum_probs=158.1
Q ss_pred CCceecccCCCCCCchHHHHHHHHHhC-CceEEecCCeeEEEecCHHHHHHHHHhCCccccccCcc-ccccccccCCCCc
Q 040285 40 PYPVIGNLLELGDKPHKSLAKLAKIHG-PIMSLKFGQVTTVVFSSAAMAKEILQNQDTSFCNRTIP-DAIYAHGHHEFGM 117 (298)
Q Consensus 40 ~~PilGnl~~l~~~~~~~~~~~~~~yG-~i~~~~~g~~~~vvv~~~~~~~evL~~~~~~f~~Rp~~-~~~~~~~~~~~~~ 117 (298)
+.++.|+......+.+..+..+.++++ ..++++.++. |+++||++++++|.++...|.+.+.. .....+ .| .|+
T Consensus 48 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--iv~~dpe~i~~vl~~~~~~~~k~~~~~~~~~~~-~g-~gi 123 (502)
T PLN02426 48 RAYLTASWAKDFDNLCDWYAHLLRRSPTGTIHVHVLGN--TITANPENVEYMLKTRFDNYPKGKPFSAILGDL-LG-RGI 123 (502)
T ss_pred CCCccHHHHHhcccHHHHHHHHHHhCCCcEEEEecCCc--EEecCHHHHHHHHhhChhcCCCcHhHHHHHHHh-cC-Cce
Confidence 466888886643456777777888887 5777776543 89999999999999887778754322 222223 22 455
Q ss_pred ccCCCChhHHHHHHHHHhhcCChhHHhHhH--HHHHHHHHHHHHHHHHHhhC--CcceehHHHHHHHHHHHHHHHHhccC
Q 040285 118 PWLPVATLWRNLRKICNSHAFSSRQLDANQ--HLRRKKIQDLLAYVQENCRA--GTAIHIGQAAFDTTLNLISNTIFSID 193 (298)
Q Consensus 118 ~~~~~g~~Wk~~Rr~l~~~~f~~~~l~~~~--~~~~~~~~~l~~~l~~~~~~--~~~vd~~~~~~~~t~~ii~~~~fG~~ 193 (298)
+..+|+.||++||++ ++.|+.+.++.+. +++.+..+.+++.|.+..+. |+++|+.+.+.++|+|+|+.++||.+
T Consensus 124 -~~~~g~~wk~~Rk~l-~~~fs~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vd~~~~~~~~t~dvi~~~~fG~~ 201 (502)
T PLN02426 124 -FNVDGDSWRFQRKMA-SLELGSVSIRSYAFEIVASEIESRLLPLLSSAADDGEGAVLDLQDVFRRFSFDNICKFSFGLD 201 (502)
T ss_pred -eecCcHHHHHHHHHh-HhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCceEcHHHHHHHHHHHHHHHHHhCCC
Confidence 557899999999998 7899998888764 67777788888888765422 46899999999999999999999998
Q ss_pred CCCCCc-hhHHHHHHHHHHHHHHhCCCCcccccccc----ccCCcccHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCC
Q 040285 194 LADPTS-KTAREFKQTNWGMMEEAGKPNLSDFFPVL----ENLDLQGIRRRMTVYFGKMLDVFDRLIDQRLKQRQERDFT 268 (298)
Q Consensus 194 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~P~l----~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 268 (298)
++..+. ....++.++++........ .....+|++ ++++. +..++..+..+.+++++.++|+++++... +
T Consensus 202 ~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~I~~r~~~~~--~-- 275 (502)
T PLN02426 202 PGCLELSLPISEFADAFDTASKLSAE-RAMAASPLLWKIKRLLNI-GSERKLKEAIKLVDELAAEVIRQRRKLGF--S-- 275 (502)
T ss_pred CcccCCCCCccHHHHHHHHHHHHHHH-HHhcchhHHHHHHHhccc-chhHHHHHHHHHHHHHHHHHHHHHHhccc--C--
Confidence 865321 1234565555554332111 001112221 22322 33456777888899999999998876422 1
Q ss_pred CCCCHHHHHhhcc
Q 040285 269 ESKDMLDALLKIC 281 (298)
Q Consensus 269 ~~~d~l~~lL~~~ 281 (298)
...|+++.|+++.
T Consensus 276 ~~~dll~~ll~~~ 288 (502)
T PLN02426 276 ASKDLLSRFMASI 288 (502)
T ss_pred CcchHHHHHHhcC
Confidence 2369999999754
No 30
>PLN02648 allene oxide synthase
Probab=99.79 E-value=2.4e-19 Score=166.54 Aligned_cols=162 Identities=8% Similarity=0.029 Sum_probs=128.0
Q ss_pred CCCCCCCCCCCceecccCCCC-----CCchHHHHHHHHHhCC-ceEEecCCeeE-------EEecCHHHHHHHHHh----
Q 040285 31 SRRLPPGPTPYPVIGNLLELG-----DKPHKSLAKLAKIHGP-IMSLKFGQVTT-------VVFSSAAMAKEILQN---- 93 (298)
Q Consensus 31 ~~~~pPgP~~~PilGnl~~l~-----~~~~~~~~~~~~~yG~-i~~~~~g~~~~-------vvv~~~~~~~evL~~---- 93 (298)
+.+.|||+.|||++|++.++. .++..++.+..+|||+ ||++++++.|+ |+++||++++.+|..
T Consensus 15 ~~~~PPg~~g~P~iG~~~~~~~~~~~~~~~~F~~~~~~kyG~~vfk~~l~g~p~~~~~~~~v~~~~~e~~~~v~~~~~~~ 94 (480)
T PLN02648 15 PLREIPGSYGLPFLGAIKDRLDYFYFQGEDEFFRSRVEKYKSTVFRVNMPPGPFIAPDPRVIALLDQKSFPVLFDVSKVD 94 (480)
T ss_pred CCCCCCCCCCCcCcchhhhhhhHHHhcChHHHHHHHHHHhCCceEEecCCCCCCCCCCCCEEEEEcCCceeeeecchhcc
Confidence 446799999999999998642 4567889999999999 99999988666 999999999999975
Q ss_pred CCccccccCccccccccccCCC-CcccCCCChhHHHHHHHHHhhcCChhHHhHhHHHHHHHHHHHHHHHHHHhhCCccee
Q 040285 94 QDTSFCNRTIPDAIYAHGHHEF-GMPWLPVATLWRNLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGTAIH 172 (298)
Q Consensus 94 ~~~~f~~Rp~~~~~~~~~~~~~-~~~~~~~g~~Wk~~Rr~l~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vd 172 (298)
++..|.+.. +.... +.++.. ...+..+|+.|+++||++ .++|+. .++.+.+.|.++++.+++.|.+....|+++|
T Consensus 95 ~~~~~~~~~-~~~~~-l~G~~~~~s~~~~~g~~H~r~Rrll-~~~f~~-~~~~~~~~m~~~~~~~~~~w~~~~~~~~~vd 170 (480)
T PLN02648 95 KRDVFTGTY-MPSTA-FTGGYRVLSYLDPSEPKHAKLKSFL-FELLKS-RHRRFIPEFRAAFAELFDTWEAELAKKGKAE 170 (480)
T ss_pred ccccceeee-ccCcc-ccCCceeeeecCCCCchHHHHHHHH-HHHHHH-hhhhhhhHHHHHHHHHHHHHHHHHhhCCCcc
Confidence 555555432 23334 322210 023446799999999999 688994 6788999999999999999975433455799
Q ss_pred hHHHHHHHHHHHHHHHHhccCCCC
Q 040285 173 IGQAAFDTTLNLISNTIFSIDLAD 196 (298)
Q Consensus 173 ~~~~~~~~t~~ii~~~~fG~~~~~ 196 (298)
+.+.+.++|++++++++||.+.+.
T Consensus 171 v~~~~~~lt~~vi~~~lfG~~~~~ 194 (480)
T PLN02648 171 FNDPLDQMAFNFLCKALTGKDPSE 194 (480)
T ss_pred ccchHHHHHHHHHHHHHcCCCcch
Confidence 999999999999999999986654
No 31
>KOG0684 consensus Cytochrome P450 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.76 E-value=4.1e-17 Score=144.26 Aligned_cols=244 Identities=14% Similarity=0.117 Sum_probs=166.5
Q ss_pred CCCCCCCC-CceecccCCCCCCchHHHHHHHHHhCCceEEecCCeeEEEecCHHHHHHHHHhCCccccccCcc-cccccc
Q 040285 33 RLPPGPTP-YPVIGNLLELGDKPHKSLAKLAKIHGPIMSLKFGQVTTVVFSSAAMAKEILQNQDTSFCNRTIP-DAIYAH 110 (298)
Q Consensus 33 ~~pPgP~~-~PilGnl~~l~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~~~~~~evL~~~~~~f~~Rp~~-~~~~~~ 110 (298)
+.||--+| .|++|++..++++|.+++.+.++||||||++.+|++.+-++.+|+....++..+.+..+-+--. ......
T Consensus 31 ~~PPli~gwiP~lG~a~~fgk~P~eFl~~~~~K~GdVFTv~l~Gk~~Tfll~p~~~~~v~~~~~~~ld~~~~~~~l~~~v 110 (486)
T KOG0684|consen 31 KEPPLIKGWIPWLGSALAFGKDPLEFLRECRKKYGDVFTVLLMGKYMTFLLGPEGYDFVFKAKLADLDFEEAYSKLTTPV 110 (486)
T ss_pred CCCcccccCcchhhHHHHhccCHHHHHHHHHHhcCCeEEEEEcCcEEEEEeCchhhHHHHcCcccccCHHHHHHHhhhhh
Confidence 46887777 5999999999999999999999999999999999999999999999999997664444322100 111112
Q ss_pred ccCCCCcccCCCChhHHHHHHHHHhhcCChhHHhHhHHHHHHHHHHHHHH-HHHHhhCCcceehHHHHHHHHHHHHHHHH
Q 040285 111 GHHEFGMPWLPVATLWRNLRKICNSHAFSSRQLDANQHLRRKKIQDLLAY-VQENCRAGTAIHIGQAAFDTTLNLISNTI 189 (298)
Q Consensus 111 ~~~~~~~~~~~~g~~Wk~~Rr~l~~~~f~~~~l~~~~~~~~~~~~~l~~~-l~~~~~~~~~vd~~~~~~~~t~~ii~~~~ 189 (298)
+ +.|++.-..+....++.+++ ...++...++++.+.|.++....... +.+ .|..-.+........+.....+.
T Consensus 111 -F-g~~v~~d~~~~~~~e~~~~~-k~~L~~~~lk~~~e~m~~el~~~f~~~~~~---s~~~d~l~~~~~~ii~tAs~~ll 184 (486)
T KOG0684|consen 111 -F-GKGVVYDVPNHVMMEQKKFF-KSALGGVALKSLVELMLEELHAYFETSLGE---SGETDGLYTFCRLIIFTASRLLL 184 (486)
T ss_pred -c-CCCccccCCCchHHHHHHHH-HHHhchhhHHHHHHHHHHHHHHHHhccccc---ccchhHhhhhhHHHhhhhHHHhh
Confidence 2 24565556688888999998 56778889999999999998888776 433 24344455555555555555566
Q ss_pred hccCCCCCCchhHHHHHHHHHHHHHHhCCCCccccccccccCCcccHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCC
Q 040285 190 FSIDLADPTSKTAREFKQTNWGMMEEAGKPNLSDFFPVLENLDLQGIRRRMTVYFGKMLDVFDRLIDQRLKQRQERDFTE 269 (298)
Q Consensus 190 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 269 (298)
+|....+.++ +...+ ..+....+.. +...||. ++|+.. .++..++++++.+.+.+.|.++++..++..
T Consensus 185 ~~e~r~~~d~-~~a~l---~~dLd~~F~~--~d~~FP~--~LP~~~-~r~~~ra~~~i~k~f~~~i~~rr~s~s~~~--- 252 (486)
T KOG0684|consen 185 GGEVRDQLDA-DVAKL---YHDLDQGFQP--FDFLFPY--NLPIPL-LRRRDRARKKISKIFSKIILDRRASISKWD--- 252 (486)
T ss_pred hhhhhhhhcc-hHHHH---HHHHhccccc--hHhhccc--CCCcch-hhhHHHHHHHHHHHHHHHHHHHHhcccccc---
Confidence 6655444211 22222 2232222222 2236775 666443 345568899999999999998887654322
Q ss_pred CCCHHHHHhhccccCCCCCCHHhhhhh
Q 040285 270 SKDMLDALLKICEDKSVEIDINDIKHL 296 (298)
Q Consensus 270 ~~d~l~~lL~~~~~~~~~lt~~~i~~~ 296 (298)
.|+++.+++ ..+++...||+|+.+.
T Consensus 253 -~dmlq~l~~-~y~dg~~~te~e~a~~ 277 (486)
T KOG0684|consen 253 -NDMLQSLME-KYKDGRPTTEEEIAGL 277 (486)
T ss_pred -HHHHHHHHH-HhhcCCcCcHHHHHHH
Confidence 589999988 3334567899988764
No 32
>COG2124 CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.57 E-value=1.6e-13 Score=125.72 Aligned_cols=231 Identities=20% Similarity=0.172 Sum_probs=157.6
Q ss_pred CCCCCCCceecccCCCCCC-chHHHHHHHHHhCCceEEecCCee--EEEecCHHHHHHHHHhCCccccccCccccc----
Q 040285 35 PPGPTPYPVIGNLLELGDK-PHKSLAKLAKIHGPIMSLKFGQVT--TVVFSSAAMAKEILQNQDTSFCNRTIPDAI---- 107 (298)
Q Consensus 35 pPgP~~~PilGnl~~l~~~-~~~~~~~~~~~yG~i~~~~~g~~~--~vvv~~~~~~~evL~~~~~~f~~Rp~~~~~---- 107 (298)
++.|........+..+... +......+.+.||.++.++..+.. .+++++++.+++++.++. .++++......
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~s~~~~v~~v~~~~~-~~~~~~~~~~~~~~~ 82 (411)
T COG2124 4 PPAPKLLGSPFALPRLLEFAPRFFLERAEDPYGDYFTLRLPGPGDGFWVVSRPADVREVLRDPR-FFSSALGAGLRPRLL 82 (411)
T ss_pred CCCCcccccchhhHHHhhcchhhhHHHHhCCCchhhhhhccCccceEEEEcCHHHHHHHHcCcc-cccccccccccccch
Confidence 3444444443333333221 334455678889999998875543 899999999999998865 23333222221
Q ss_pred cccccCCCCcccCCCChhHHHHHHHHHhhcCChhHHhHhHHHHHHHHHHHHHHHHHHhhCCcceehHHHHHHHHHHHHHH
Q 040285 108 YAHGHHEFGMPWLPVATLWRNLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGTAIHIGQAAFDTTLNLISN 187 (298)
Q Consensus 108 ~~~~~~~~~~~~~~~g~~Wk~~Rr~l~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~t~~ii~~ 187 (298)
..+ .+ .+..+..+|+.|+++||++ +++|+++.++++.+.+.+.++.+++.+ +. ++.+++.+.+..+++.+||
T Consensus 83 ~~~-~~-~~~ll~~dg~~H~r~Rkl~-~~~F~~~~~~~~~~~i~~~~~~~~~~~-~~---~~~~~v~~~a~~l~~~vi~- 154 (411)
T COG2124 83 RPV-LG-DGSLLTLDGPEHTRLRKLL-APAFTPRALRGYRPLIREIADRLLDDL-WQ---GGADLVLDFAAELTLRVIA- 154 (411)
T ss_pred hhh-cc-ccceeecCCHHHHHHHHHh-ccccCHHHHHHHHHHHHHHHHHHHHhc-cc---CCchhHHHHhhhhhHHHHH-
Confidence 112 12 2213457899999999998 799999999999999999999999988 32 3678899999999999999
Q ss_pred HHhccCCCCCCchhHHHHHHHHHHHHHHhCCCCccccccccccCCcccHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCC
Q 040285 188 TIFSIDLADPTSKTAREFKQTNWGMMEEAGKPNLSDFFPVLENLDLQGIRRRMTVYFGKMLDVFDRLIDQRLKQRQERDF 267 (298)
Q Consensus 188 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 267 (298)
.+||.+.+. ...+........... .|. .. ......+..+...++.+++.++|++++. .
T Consensus 155 ~l~Gv~~~~-----~~~~~~~~~~~~~~~--------~~~--~~-~~~~~~~~~~a~~~~~~~~~~li~~rR~-----~- 212 (411)
T COG2124 155 ELLGVPLED-----RPQLLRWSDALLLRL--------DPD--LG-PEEPWRRARAARRELDAYLRALIAERRA-----A- 212 (411)
T ss_pred HHhCCCHHH-----HHHHHHHHHHHHhcc--------Ccc--cC-CcccHHHHHHHHHHHHHHHHHHHHHhcc-----C-
Confidence 999986643 223333332222210 011 11 1112356778889999999999999982 1
Q ss_pred CCCCCHHHHHhhccccCCCCCCHHhhhhhc
Q 040285 268 TESKDMLDALLKICEDKSVEIDINDIKHLF 297 (298)
Q Consensus 268 ~~~~d~l~~lL~~~~~~~~~lt~~~i~~~~ 297 (298)
..+|+++.|+.+.+++++.+|++||++.+
T Consensus 213 -~~~dlls~l~~a~~~~~~~lsd~Ei~~~~ 241 (411)
T COG2124 213 -PRDDLLSLLLSAEDDGGGRLSDDEIRDEL 241 (411)
T ss_pred -CcccHHHHHHHHhhCCCCcCCHHHHHHHH
Confidence 23799999998876644479999998865
No 33
>KOG0114 consensus Predicted RNA-binding protein (RRM superfamily) [General function prediction only]
Probab=85.24 E-value=3.8 Score=29.64 Aligned_cols=62 Identities=24% Similarity=0.273 Sum_probs=46.9
Q ss_pred CCCCCCCCCCCCceecccCCCCCCchHHHHHHHHHhCCceEEecCC------eeEEEecCHHHHHHHHHh
Q 040285 30 GSRRLPPGPTPYPVIGNLLELGDKPHKSLAKLAKIHGPIMSLKFGQ------VTTVVFSSAAMAKEILQN 93 (298)
Q Consensus 30 ~~~~~pPgP~~~PilGnl~~l~~~~~~~~~~~~~~yG~i~~~~~g~------~~~vvv~~~~~~~evL~~ 93 (298)
.+.++||-...+-++.|++. +-.-+...++..+||.|-.+++|. +-.||-.|...|+.+...
T Consensus 9 ~~~rlppevnriLyirNLp~--~ITseemydlFGkyg~IrQIRiG~~k~TrGTAFVVYedi~dAk~A~dh 76 (124)
T KOG0114|consen 9 QNIRLPPEVNRILYIRNLPF--KITSEEMYDLFGKYGTIRQIRIGNTKETRGTAFVVYEDIFDAKKACDH 76 (124)
T ss_pred CCCCCChhhheeEEEecCCc--cccHHHHHHHhhcccceEEEEecCccCcCceEEEEehHhhhHHHHHHH
Confidence 44567777777888888754 222356778889999999999995 457888999999988865
No 34
>PHA03049 IMV membrane protein; Provisional
Probab=81.27 E-value=3.5 Score=26.90 Aligned_cols=45 Identities=16% Similarity=0.300 Sum_probs=31.2
Q ss_pred cccchHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCCceeccc
Q 040285 3 MVSCVPWLLFSWILVVALNYFSRGFKSGSRRLPPGPTPYPVIGNL 47 (298)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pPgP~~~PilGnl 47 (298)
||.-..+.++|+++..++.|.+..++.....-||.|-..+-.-++
T Consensus 1 MI~d~~l~iICVaIi~lIvYgiYnkk~~~q~~~p~~e~ye~~e~~ 45 (68)
T PHA03049 1 MIGDIILVIICVVIIGLIVYGIYNKKTTTSQNPPSQEKYEKMEDL 45 (68)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCChhhccCchhh
Confidence 566677888888888888998887665555555555556555544
No 35
>PF05961 Chordopox_A13L: Chordopoxvirus A13L protein; InterPro: IPR009236 This family consists of A13L proteins from the Chordopoxviruses. A13L or p8 is one of the three most abundant membrane proteins of the intracellular mature Vaccinia virus [].
Probab=77.91 E-value=5 Score=26.33 Aligned_cols=35 Identities=11% Similarity=0.130 Sum_probs=24.7
Q ss_pred cccchHHHHHHHHHHHHHHHHHhhccCCCCCCCCC
Q 040285 3 MVSCVPWLLFSWILVVALNYFSRGFKSGSRRLPPG 37 (298)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pPg 37 (298)
||.-..++++|+++..++.|.+..++......+|.
T Consensus 1 MI~d~iLi~ICVaii~lIlY~iYnr~~~~q~~~~~ 35 (68)
T PF05961_consen 1 MIGDFILIIICVAIIGLILYGIYNRKKTTQNTNPS 35 (68)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCc
Confidence 56667788888888888899888665554333444
No 36
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=73.89 E-value=8 Score=35.90 Aligned_cols=38 Identities=13% Similarity=0.103 Sum_probs=29.3
Q ss_pred HHhCCceEEecCCeeEEEecCHHHHHHHHHhCCccccc
Q 040285 63 KIHGPIMSLKFGQVTTVVFSSAAMAKEILQNQDTSFCN 100 (298)
Q Consensus 63 ~~yG~i~~~~~g~~~~vvv~~~~~~~evL~~~~~~f~~ 100 (298)
-+||.|+.-.+-++.+-|=.=|..=++-+.+..++|+.
T Consensus 221 Grfg~V~KaqL~~~~VAVKifp~~~kqs~~~Ek~Iy~l 258 (534)
T KOG3653|consen 221 GRFGCVWKAQLDNRLVAVKIFPEQEKQSFQNEKNIYSL 258 (534)
T ss_pred CccceeehhhccCceeEEEecCHHHHHHHHhHHHHHhc
Confidence 38899999888777777777777777777777777765
No 37
>PF00076 RRM_1: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain); InterPro: IPR000504 Many eukaryotic proteins containing one or more copies of a putative RNA-binding domain of about 90 amino acids are known to bind single-stranded RNAs [, , ]. The largest group of single strand RNA-binding proteins is the eukaryotic RNA recognition motif (RRM) family that contains an eight amino acid RNP-1 consensus sequence [, ]. RRM proteins have a variety of RNA binding preferences and functions, and include heterogeneous nuclear ribonucleoproteins (hnRNPs), proteins implicated in regulation of alternative splicing (SR, U2AF, Sxl), protein components of small nuclear ribonucleoproteins (U1 and U2 snRNPs), and proteins that regulate RNA stability and translation (PABP, La, Hu) [, , ]. The RRM in heterodimeric splicing factor U2 snRNP auxiliary factor (U2AF) appears to have two RRM-like domains with specialised features for protein recognition []. The motif also appears in a few single stranded DNA binding proteins. The typical RRM consists of four anti-parallel beta-strands and two alpha-helices arranged in a beta-alpha-beta-beta-alpha-beta fold with side chains that stack with RNA bases. Specificity of RNA binding is determined by multiple contacts with surrounding amino acids. A third helix is present during RNA binding in some cases []. The RRM is reviewed in a number of publications [, , ].; GO: 0003676 nucleic acid binding; PDB: 2RNE_A 2DGO_A 2DO4_A 1YTY_B 2VOO_B 2VOP_A 2VON_B 1ZH5_B 2VOD_A 1S79_A ....
Probab=64.59 E-value=25 Score=22.38 Aligned_cols=55 Identities=24% Similarity=0.231 Sum_probs=37.4
Q ss_pred eecccCCCCCCchHHHHHHHHHhCCceEEecCC--------eeEEEecCHHHHHHHHH-hCCcccc
Q 040285 43 VIGNLLELGDKPHKSLAKLAKIHGPIMSLKFGQ--------VTTVVFSSAAMAKEILQ-NQDTSFC 99 (298)
Q Consensus 43 ilGnl~~l~~~~~~~~~~~~~~yG~i~~~~~g~--------~~~vvv~~~~~~~evL~-~~~~~f~ 99 (298)
+|||++.- -....+.++.++||++..+++.. .-.|...+.+.++.++. -++..+.
T Consensus 2 ~v~nlp~~--~t~~~l~~~f~~~g~i~~~~~~~~~~~~~~~~a~V~F~~~~~a~~a~~~l~g~~~~ 65 (70)
T PF00076_consen 2 YVGNLPPD--VTEEELRDFFSQFGKIESIKVMRNSSGKSKGYAFVEFESEEDAEKALEELNGKKIN 65 (70)
T ss_dssp EEESETTT--SSHHHHHHHHHTTSTEEEEEEEEETTSSEEEEEEEEESSHHHHHHHHHHHTTEEET
T ss_pred EEcCCCCc--CCHHHHHHHHHHhhhcccccccccccccccceEEEEEcCHHHHHHHHHHcCCCEEC
Confidence 46777542 22467888999999987766544 24667889999999987 3343333
No 38
>PLN03120 nucleic acid binding protein; Provisional
Probab=63.34 E-value=35 Score=29.24 Aligned_cols=59 Identities=14% Similarity=0.255 Sum_probs=46.8
Q ss_pred eecccCCCCCCchHHHHHHHHHhCCceEEec------CCeeEEEecCHHHHHHHHHhCCccccccCc
Q 040285 43 VIGNLLELGDKPHKSLAKLAKIHGPIMSLKF------GQVTTVVFSSAAMAKEILQNQDTSFCNRTI 103 (298)
Q Consensus 43 ilGnl~~l~~~~~~~~~~~~~~yG~i~~~~~------g~~~~vvv~~~~~~~evL~~~~~~f~~Rp~ 103 (298)
++||+..- --...+.+....||+|-.+.+ ++.-.|...+++.++.++.-++..+.+|+.
T Consensus 8 fVgNLs~~--tTE~dLrefFS~~G~I~~V~I~~d~~~~GfAFVtF~d~eaAe~AllLnG~~l~gr~V 72 (260)
T PLN03120 8 KVSNVSLK--ATERDIKEFFSFSGDIEYVEMQSENERSQIAYVTFKDPQGAETALLLSGATIVDQSV 72 (260)
T ss_pred EEeCCCCC--CCHHHHHHHHHhcCCeEEEEEeecCCCCCEEEEEeCcHHHHHHHHHhcCCeeCCceE
Confidence 57787532 234567888899999999988 356788899999999999888888888863
No 39
>smart00362 RRM_2 RNA recognition motif.
Probab=59.12 E-value=41 Score=20.96 Aligned_cols=39 Identities=28% Similarity=0.389 Sum_probs=28.9
Q ss_pred hHHHHHHHHHhCCceEEecCC-------eeEEEecCHHHHHHHHHh
Q 040285 55 HKSLAKLAKIHGPIMSLKFGQ-------VTTVVFSSAAMAKEILQN 93 (298)
Q Consensus 55 ~~~~~~~~~~yG~i~~~~~g~-------~~~vvv~~~~~~~evL~~ 93 (298)
...+.++.++||++..+.+-. .-.|-..+++.+++++..
T Consensus 13 ~~~l~~~~~~~g~v~~~~~~~~~~~~~~~~~v~f~~~~~a~~a~~~ 58 (72)
T smart00362 13 EEDLKELFSKFGPIESVKIPKDTGKSKGFAFVEFESEEDAEKAIEA 58 (72)
T ss_pred HHHHHHHHHhcCCEEEEEEecCCCCCCceEEEEeCCHHHHHHHHHH
Confidence 456778888999887766543 335677899999988864
No 40
>PF15102 TMEM154: TMEM154 protein family
Probab=54.99 E-value=10 Score=29.23 Aligned_cols=10 Identities=20% Similarity=0.155 Sum_probs=6.1
Q ss_pred HHHHHHHHHh
Q 040285 56 KSLAKLAKIH 65 (298)
Q Consensus 56 ~~~~~~~~~y 65 (298)
+.+.+|..+-
T Consensus 128 eeldkwm~s~ 137 (146)
T PF15102_consen 128 EELDKWMNSM 137 (146)
T ss_pred HHHHhHHHhh
Confidence 4666776654
No 41
>PF13625 Helicase_C_3: Helicase conserved C-terminal domain
Probab=54.57 E-value=29 Score=26.09 Aligned_cols=38 Identities=13% Similarity=0.192 Sum_probs=30.4
Q ss_pred hHHHHHHHHHhCCceEEecCCeeEEEecCHHHHHHHHHhC
Q 040285 55 HKSLAKLAKIHGPIMSLKFGQVTTVVFSSAAMAKEILQNQ 94 (298)
Q Consensus 55 ~~~~~~~~~~yG~i~~~~~g~~~~vvv~~~~~~~evL~~~ 94 (298)
-..+.+|.++||.+--. .+...+...|++.++|++...
T Consensus 77 ~~~i~~w~~~~g~v~l~--~~~~~l~~~d~~~l~~l~~~~ 114 (129)
T PF13625_consen 77 EQSIEDWARRYGRVRLY--KGAYLLECDDPELLDELLADP 114 (129)
T ss_pred HHHHHHHHHhcCCEEEe--cCeEEEEECCHHHHHHHHhCh
Confidence 45788999999976552 257888999999999998653
No 42
>PRK00994 F420-dependent methylenetetrahydromethanopterin dehydrogenase; Provisional
Probab=51.77 E-value=66 Score=27.17 Aligned_cols=117 Identities=14% Similarity=0.203 Sum_probs=68.9
Q ss_pred eecccCCCC-CCchHHHHHHHHHhCCceEEecCCeeEEEecCHHHHHHHHHhCCc---cccccCccccccccccCCCCcc
Q 040285 43 VIGNLLELG-DKPHKSLAKLAKIHGPIMSLKFGQVTTVVFSSAAMAKEILQNQDT---SFCNRTIPDAIYAHGHHEFGMP 118 (298)
Q Consensus 43 ilGnl~~l~-~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~~~~~~evL~~~~~---~f~~Rp~~~~~~~~~~~~~~~~ 118 (298)
.+|+-..++ ...-....+..+.++|=|.+.+++.+.. -+|..+||.|...+- ..++.|.......+-..+.|-.
T Consensus 36 v~gsGaKm~pe~~~~~~~~~~~~~~pDf~i~isPN~a~--PGP~~ARE~l~~~~iP~IvI~D~p~~K~~d~l~~~g~GYI 113 (277)
T PRK00994 36 VVGSGAKMGPEEVEEVVKKMLEEWKPDFVIVISPNPAA--PGPKKAREILKAAGIPCIVIGDAPGKKVKDAMEEQGLGYI 113 (277)
T ss_pred EeccCCCCCHHHHHHHHHHHHHhhCCCEEEEECCCCCC--CCchHHHHHHHhcCCCEEEEcCCCccchHHHHHhcCCcEE
Confidence 344444443 2233455666788899999999876654 799999999975422 3444553322222211123334
Q ss_pred cCCCChhHHHHHHHHHhhc----CChhHHhHh-----HHHHHHHHHHHHHHHH
Q 040285 119 WLPVATLWRNLRKICNSHA----FSSRQLDAN-----QHLRRKKIQDLLAYVQ 162 (298)
Q Consensus 119 ~~~~g~~Wk~~Rr~l~~~~----f~~~~l~~~-----~~~~~~~~~~l~~~l~ 162 (298)
...-++.--..|.++ .|. |+...++.+ .-+++++.+.+++.+.
T Consensus 114 ivk~DpMIGArREFL-DP~EMa~fNaD~~kVLa~tG~~RlvQ~elD~vi~~v~ 165 (277)
T PRK00994 114 IVKADPMIGARREFL-DPVEMALFNADVLKVLAGTGAVRLVQEELDKVIDQVK 165 (277)
T ss_pred EEecCccccchhhcc-CHHHHHHhhhhHHHHHHhhhHHHHHHHHHHHHHHHHh
Confidence 445567777778887 443 766544432 3466777777777764
No 43
>TIGR01661 ELAV_HUD_SF ELAV/HuD family splicing factor. These proteins contain 3 RNA-recognition motifs (rrm: pfam00076).
Probab=49.74 E-value=51 Score=29.30 Aligned_cols=59 Identities=17% Similarity=0.088 Sum_probs=43.8
Q ss_pred ceecccCCCCCCchHHHHHHHHHhCCceEEecCCee---------EEEecCHHHHHHHHHh-CCccccccC
Q 040285 42 PVIGNLLELGDKPHKSLAKLAKIHGPIMSLKFGQVT---------TVVFSSAAMAKEILQN-QDTSFCNRT 102 (298)
Q Consensus 42 PilGnl~~l~~~~~~~~~~~~~~yG~i~~~~~g~~~---------~vvv~~~~~~~evL~~-~~~~f~~Rp 102 (298)
-++|||+.- .-...+.+...+||+|..+++-..+ .|...+++.|..++.. ++..+.+|+
T Consensus 272 lfV~NL~~~--~~e~~L~~~F~~fG~v~~v~i~~d~~t~~skG~aFV~F~~~~~A~~Ai~~lnG~~~~gr~ 340 (352)
T TIGR01661 272 IFVYNLSPD--TDETVLWQLFGPFGAVQNVKIIRDLTTNQCKGYGFVSMTNYDEAAMAILSLNGYTLGNRV 340 (352)
T ss_pred EEEeCCCCC--CCHHHHHHHHHhCCCeEEEEEeEcCCCCCccceEEEEECCHHHHHHHHHHhCCCEECCeE
Confidence 578888643 2345678888999999998875444 7888899988888764 566677765
No 44
>PLN03134 glycine-rich RNA-binding protein 4; Provisional
Probab=49.08 E-value=66 Score=24.77 Aligned_cols=59 Identities=19% Similarity=0.155 Sum_probs=42.6
Q ss_pred ceecccCCCCCCchHHHHHHHHHhCCceEEecC---------CeeEEEecCHHHHHHHHHh-CCccccccC
Q 040285 42 PVIGNLLELGDKPHKSLAKLAKIHGPIMSLKFG---------QVTTVVFSSAAMAKEILQN-QDTSFCNRT 102 (298)
Q Consensus 42 PilGnl~~l~~~~~~~~~~~~~~yG~i~~~~~g---------~~~~vvv~~~~~~~evL~~-~~~~f~~Rp 102 (298)
-+|||++.- -....+.++.++||+|..+.+- +.-+|-..+++.|+.++.. ++..+.+|+
T Consensus 37 lfVgnL~~~--~te~~L~~~F~~~G~I~~v~i~~d~~tg~~kGfaFV~F~~~e~A~~Al~~lng~~i~Gr~ 105 (144)
T PLN03134 37 LFIGGLSWG--TDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISEMDGKELNGRH 105 (144)
T ss_pred EEEeCCCCC--CCHHHHHHHHhcCCCeEEEEEEecCCCCCcceEEEEEECCHHHHHHHHHHcCCCEECCEE
Confidence 567777543 2345788888999999887763 3567888999999999974 455566664
No 45
>PF13893 RRM_5: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain); PDB: 2PE8_A 2PEH_A 2D9O_A 1A9N_D 2DIT_A 3S6E_A 2LQ5_A 1SJQ_A 2AD9_A 1X4D_A ....
Probab=48.09 E-value=38 Score=20.86 Aligned_cols=43 Identities=23% Similarity=0.310 Sum_probs=28.5
Q ss_pred HHHHHHhCCceEEecCC----eeEEEecCHHHHHHHHHh-CCcccccc
Q 040285 59 AKLAKIHGPIMSLKFGQ----VTTVVFSSAAMAKEILQN-QDTSFCNR 101 (298)
Q Consensus 59 ~~~~~~yG~i~~~~~g~----~~~vvv~~~~~~~evL~~-~~~~f~~R 101 (298)
.+...+||+|-.+.+-. .-.|-..+++.|+.+... ++..|.+|
T Consensus 2 ~~~f~~fG~V~~i~~~~~~~~~a~V~f~~~~~A~~a~~~l~~~~~~g~ 49 (56)
T PF13893_consen 2 YKLFSKFGEVKKIKIFKKKRGFAFVEFASVEDAQKAIEQLNGRQFNGR 49 (56)
T ss_dssp HHHHTTTS-EEEEEEETTSTTEEEEEESSHHHHHHHHHHHTTSEETTE
T ss_pred hHHhCCcccEEEEEEEeCCCCEEEEEECCHHHHHHHHHHhCCCEECCc
Confidence 45678999999888754 345666789998888763 34444444
No 46
>PF15050 SCIMP: SCIMP protein
Probab=46.28 E-value=49 Score=24.53 Aligned_cols=15 Identities=33% Similarity=0.523 Sum_probs=10.3
Q ss_pred CCCCC-CCCCceeccc
Q 040285 33 RLPPG-PTPYPVIGNL 47 (298)
Q Consensus 33 ~~pPg-P~~~PilGnl 47 (298)
.+||- |++.|..|..
T Consensus 68 ~LPpLPPRg~~s~~~~ 83 (133)
T PF15050_consen 68 QLPPLPPRGSPSPEDS 83 (133)
T ss_pred CCCCCCCCCCCCcccc
Confidence 56674 4578888866
No 47
>COG4459 NapE Periplasmic nitrate reductase system, NapE component [Energy production and conversion]
Probab=45.03 E-value=22 Score=22.51 Aligned_cols=32 Identities=19% Similarity=0.155 Sum_probs=14.5
Q ss_pred chHHHHHHHHHHHHHHHHHhh-ccCCCCCCCCCCCC
Q 040285 6 CVPWLLFSWILVVALNYFSRG-FKSGSRRLPPGPTP 40 (298)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~pPgP~~ 40 (298)
+.+|.++++.+.=++-|.++- .. --.||||++
T Consensus 29 ~~l~PilsV~~VG~yGFiVWM~Qi---ifGPPGpp~ 61 (62)
T COG4459 29 FGLFPILSVAFVGGYGFIVWMFQI---IFGPPGPPG 61 (62)
T ss_pred HHHHHHHHHHHhcchhHHHHHHHH---HhCCCCCCC
Confidence 345555544443333333331 11 234788765
No 48
>COG1927 Mtd Coenzyme F420-dependent N(5),N(10)-methenyltetrahydromethanopterin dehydrogenase [Energy production and conversion]
Probab=40.11 E-value=1.1e+02 Score=25.29 Aligned_cols=118 Identities=12% Similarity=0.165 Sum_probs=69.8
Q ss_pred ceecccCCCC-CCchHHHHHHHHHhCCceEEecCCeeEEEecCHHHHHHHHHhCC---ccccccCccccccccccCCCCc
Q 040285 42 PVIGNLLELG-DKPHKSLAKLAKIHGPIMSLKFGQVTTVVFSSAAMAKEILQNQD---TSFCNRTIPDAIYAHGHHEFGM 117 (298)
Q Consensus 42 PilGnl~~l~-~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~~~~~~evL~~~~---~~f~~Rp~~~~~~~~~~~~~~~ 117 (298)
-++|+--.+. ........+..+++.+=|-+++++.|.. -+|..+||+|...+ -..++-|-......+-..+.|-
T Consensus 35 rVvgsgaKM~Pe~veaav~~~~e~~~pDfvi~isPNpaa--PGP~kARE~l~~s~~PaiiigDaPg~~vkdeleeqGlGY 112 (277)
T COG1927 35 RVVGSGAKMDPECVEAAVTEMLEEFNPDFVIYISPNPAA--PGPKKAREILSDSDVPAIIIGDAPGLKVKDELEEQGLGY 112 (277)
T ss_pred EEeccccccChHHHHHHHHHHHHhcCCCEEEEeCCCCCC--CCchHHHHHHhhcCCCEEEecCCccchhHHHHHhcCCeE
Confidence 4455554442 2122355677888888899999987765 79999999997432 2333444322322232223344
Q ss_pred ccCCCChhHHHHHHHHHhhc----CChhHHhHh-----HHHHHHHHHHHHHHHH
Q 040285 118 PWLPVATLWRNLRKICNSHA----FSSRQLDAN-----QHLRRKKIQDLLAYVQ 162 (298)
Q Consensus 118 ~~~~~g~~Wk~~Rr~l~~~~----f~~~~l~~~-----~~~~~~~~~~l~~~l~ 162 (298)
.....++.--..|.++ .|. |+...++.+ ..+++++.+.+++...
T Consensus 113 Iivk~DpmiGArREFL-DPvEMA~fNaDv~kVLa~tGa~R~vQeaiD~~ie~vk 165 (277)
T COG1927 113 IIVKADPMIGARREFL-DPVEMASFNADVMKVLAATGAFRLVQEAIDKVIEDVK 165 (277)
T ss_pred EEecCCcccchhhhhc-CHHHHHhhhhHHHHHHHhccHHHHHHHHHHHHHHHHh
Confidence 4556677777888887 443 665444422 3456666777766654
No 49
>PF09061 Stirrup: Stirrup; InterPro: IPR015146 The Stirrup domain, found in the prokaryotic protein ribonucleotide reductase, has a molecular mass of 9 kDa and is folded into an alpha/beta structure. It allows for binding of the reductase to DNA via electrostatic interactions, since it has a predominance of positive charges distributed on its surface []. ; GO: 0016788 hydrolase activity, acting on ester bonds; PDB: 1DQ3_A.
Probab=38.84 E-value=74 Score=20.76 Aligned_cols=28 Identities=14% Similarity=0.159 Sum_probs=18.9
Q ss_pred hHHHHHHHHHhCCceEEecCCeeEEEecC
Q 040285 55 HKSLAKLAKIHGPIMSLKFGQVTTVVFSS 83 (298)
Q Consensus 55 ~~~~~~~~~~yG~i~~~~~g~~~~vvv~~ 83 (298)
.+.|.+|+.+||-=|.. -|++...++.+
T Consensus 9 f~afk~was~ygvefkt-ngsqtlaii~~ 36 (79)
T PF09061_consen 9 FNAFKEWASKYGVEFKT-NGSQTLAIIKN 36 (79)
T ss_dssp HHHHHHHHHTTT-EEEE-ETTEEEEEETT
T ss_pred HHHHHHHHHHhCeEEec-CCceEEEeecC
Confidence 46799999999955554 46666555543
No 50
>PF15048 OSTbeta: Organic solute transporter subunit beta protein
Probab=38.28 E-value=40 Score=25.26 Aligned_cols=22 Identities=27% Similarity=0.623 Sum_probs=11.2
Q ss_pred cchHHHHHHHHH---HHHHHHHHhh
Q 040285 5 SCVPWLLFSWIL---VVALNYFSRG 26 (298)
Q Consensus 5 ~~~~~~~~~~~~---~~~~~~~~~~ 26 (298)
+++||.+..+++ .+++.++++.
T Consensus 31 D~tpWNysiL~Ls~vvlvi~~~LLg 55 (125)
T PF15048_consen 31 DATPWNYSILALSFVVLVISFFLLG 55 (125)
T ss_pred CCCCcchHHHHHHHHHHHHHHHHHH
Confidence 578888433333 3333444444
No 51
>PF01102 Glycophorin_A: Glycophorin A; InterPro: IPR001195 Proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins [Reid M.E., Lomas-Francis C. The Blood Group Antigen FactsBook Academic Press, London / San Diego, (1997)]. Glycophorin A (PAS-2) and glycophorin B (PAS-3) belong to the MNS blood group system and are associated with antigens that include M/N, S/s, U, He, Mi(a), M(c), Vw, Mur, M(g), Vr, M(e), Mt(a), St(a), Ri(a), Cl(a), Ny(a), Hut, Hil, M(v), Far, Mit, Dantu, Hop, Nob, En(a), ENKT, amongst others. Glycophorin A is the major sialoglycoprotein of the erythrocyte membrane []. Structurally, glycophorin A consists of an N-terminal extracellular domain, heavily glycosylated on serine and threonine residues, followed by a transmembrane region and a C-terminal cytoplasmic domain. Other glycophorins in this entry such as Glycophorin B and Glycophorin E represent minor sialoglycoproteins in the erythrocyte membrane.; GO: 0016021 integral to membrane; PDB: 2KPF_B 1AFO_B 2KPE_A.
Probab=37.73 E-value=31 Score=25.88 Aligned_cols=11 Identities=0% Similarity=-0.281 Sum_probs=3.6
Q ss_pred HHHHhhccCCC
Q 040285 21 NYFSRGFKSGS 31 (298)
Q Consensus 21 ~~~~~~~~~~~ 31 (298)
++|+.+|+.|+
T Consensus 84 i~y~irR~~Kk 94 (122)
T PF01102_consen 84 ISYCIRRLRKK 94 (122)
T ss_dssp HHHHHHHHS--
T ss_pred HHHHHHHHhcc
Confidence 33444344443
No 52
>PF15183 MRAP: Melanocortin-2 receptor accessory protein family
Probab=36.92 E-value=85 Score=21.69 Aligned_cols=17 Identities=18% Similarity=0.094 Sum_probs=7.1
Q ss_pred chHHHHHHHHHHHHHHH
Q 040285 6 CVPWLLFSWILVVALNY 22 (298)
Q Consensus 6 ~~~~~~~~~~~~~~~~~ 22 (298)
+|+-+-++++++.++.|
T Consensus 38 IVI~FWv~LA~FV~~lF 54 (90)
T PF15183_consen 38 IVIAFWVSLAAFVVFLF 54 (90)
T ss_pred eehhHHHHHHHHHHHHH
Confidence 44444444444444444
No 53
>PF14259 RRM_6: RNA recognition motif (a.k.a. RRM, RBD, or RNP domain); PDB: 2DNN_A 1WI6_A 2EVZ_A 2ADC_A 1QM9_A 2KG1_A 2HGN_A 1U2F_A 2G4B_A 2HZC_A ....
Probab=36.20 E-value=49 Score=21.27 Aligned_cols=51 Identities=25% Similarity=0.318 Sum_probs=34.4
Q ss_pred eecccCCCCCCchHHHHHHHHHhCCceEEecCC--------eeEEEecCHHHHHHHHHhCC
Q 040285 43 VIGNLLELGDKPHKSLAKLAKIHGPIMSLKFGQ--------VTTVVFSSAAMAKEILQNQD 95 (298)
Q Consensus 43 ilGnl~~l~~~~~~~~~~~~~~yG~i~~~~~g~--------~~~vvv~~~~~~~evL~~~~ 95 (298)
+|||++. .-....+.++...||+|-.+.+.. .=.|-..+++.+++++....
T Consensus 2 ~i~nlp~--~~~~~~l~~~f~~~g~v~~v~~~~~~~~~~~~~a~v~f~~~~~a~~al~~~~ 60 (70)
T PF14259_consen 2 YISNLPP--STTEEDLRNFFSRFGPVEKVRLIKNKDGQSRGFAFVEFSSEEDAKRALELLN 60 (70)
T ss_dssp EEESSTT--T--HHHHHHHCTTSSBEEEEEEEESTTSSEEEEEEEEESSHHHHHHHHHHHT
T ss_pred EEeCCCC--CCCHHHHHHHHHhcCCcceEEEEeeeccccCCEEEEEeCCHHHHHHHHHHCC
Confidence 3566653 223356777888899887766543 23677889999999997654
No 54
>PF06667 PspB: Phage shock protein B; InterPro: IPR009554 This family consists of several bacterial phage shock protein B (PspB) sequences. The phage shock protein (psp) operon is induced in response to heat, ethanol, osmotic shock and infection by filamentous bacteriophages []. Expression of the operon requires the alternative sigma factor sigma54 and the transcriptional activator PspF. In addition, PspA plays a negative regulatory role, and the integral-membrane proteins PspB and PspC play a positive one [].; GO: 0006355 regulation of transcription, DNA-dependent, 0009271 phage shock
Probab=33.17 E-value=74 Score=21.61 Aligned_cols=9 Identities=33% Similarity=0.707 Sum_probs=4.0
Q ss_pred ccchHHHHH
Q 040285 4 VSCVPWLLF 12 (298)
Q Consensus 4 ~~~~~~~~~ 12 (298)
+.++|+.++
T Consensus 5 fl~~plivf 13 (75)
T PF06667_consen 5 FLFVPLIVF 13 (75)
T ss_pred HHHHHHHHH
Confidence 344444444
No 55
>PF07095 IgaA: Intracellular growth attenuator protein IgaA; InterPro: IPR010771 This family consists of several bacterial intracellular growth attenuator (IgaA) proteins. IgaA is involved in negative control of bacterial proliferation within fibroblasts. IgaA is homologous to the Escherichia coli YrfF and Proteus mirabilis UmoB proteins. Whereas the biological function of YrfF is currently unknown, UmoB has been shown elsewhere to act as a positive regulator of FlhDC, the master regulator of flagella and swarming. FlhDC has been shown to repress cell division during P. mirabilis swarming, suggesting that UmoB could repress cell division via FlhDC. This biological function, if maintained in Salmonella enterica, could sustain a putative negative control of cell division and growth exerted by IgaA in intracellular bacteria [].; GO: 0009276 Gram-negative-bacterium-type cell wall, 0016021 integral to membrane
Probab=30.70 E-value=69 Score=31.33 Aligned_cols=43 Identities=26% Similarity=0.443 Sum_probs=24.9
Q ss_pred cchHHHHHHHHHHHHHHHHHhhccCCCCCC-----CCC-CCCCceeccc
Q 040285 5 SCVPWLLFSWILVVALNYFSRGFKSGSRRL-----PPG-PTPYPVIGNL 47 (298)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----pPg-P~~~PilGnl 47 (298)
.+.||++..+++.++.-+|.++++..+.++ .-| |+.|.++|..
T Consensus 226 ~~~pWL~~~a~l~~~~~~w~lfr~p~~~~lqeVhClrG~PkrwgLfgE~ 274 (705)
T PF07095_consen 226 VLLPWLLAAAALLLAWGLWLLFRPPSPRKLQEVHCLRGTPKRWGLFGES 274 (705)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCccccchhhhcccCccceeeeeccc
Confidence 356777666666656656666543322211 234 8889888854
No 56
>PF08693 SKG6: Transmembrane alpha-helix domain; InterPro: IPR014805 SKG6 and AXL2 are membrane proteins that show polarised intracellular localisation [, ]. This entry represents the highly conserved transmembrane alpha-helical domain found in these proteins [, ]. The full-length AXL2 protein has a negative regulatory function in cytokinesis [].
Probab=30.14 E-value=34 Score=20.08 Aligned_cols=6 Identities=33% Similarity=0.379 Sum_probs=2.4
Q ss_pred hHHHHH
Q 040285 7 VPWLLF 12 (298)
Q Consensus 7 ~~~~~~ 12 (298)
+|+..+
T Consensus 19 VPV~vI 24 (40)
T PF08693_consen 19 VPVGVI 24 (40)
T ss_pred echHHH
Confidence 344433
No 57
>COG3763 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=28.26 E-value=79 Score=21.07 Aligned_cols=26 Identities=8% Similarity=0.188 Sum_probs=15.7
Q ss_pred CCcccchHHHHHHHHHHHHHHHHHhh
Q 040285 1 MDMVSCVPWLLFSWILVVALNYFSRG 26 (298)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 26 (298)
||...+.++..+++++.++.-||+.+
T Consensus 1 m~l~lail~ivl~ll~G~~~G~fiar 26 (71)
T COG3763 1 MSLWLAILLIVLALLAGLIGGFFIAR 26 (71)
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45556666666666666666665554
No 58
>PF15206 FAM209: FAM209 family
Probab=28.09 E-value=63 Score=24.70 Aligned_cols=31 Identities=23% Similarity=0.430 Sum_probs=17.3
Q ss_pred HHHHHHHHHHHhh-c---cCCCCCCCCCCCCCcee
Q 040285 14 WILVVALNYFSRG-F---KSGSRRLPPGPTPYPVI 44 (298)
Q Consensus 14 ~~~~~~~~~~~~~-~---~~~~~~~pPgP~~~Pil 44 (298)
+++++++.|-++. + ...+.+.|||..|.|+-
T Consensus 43 WL~Fvv~lyvilKf~g~~~K~keq~p~glrg~~fr 77 (150)
T PF15206_consen 43 WLLFVVVLYVILKFRGDSEKNKEQSPPGLRGCSFR 77 (150)
T ss_pred HHHHHHHHHheeEeccCcccccccCCCccCcccCC
Confidence 3444555664443 2 22345668888887763
No 59
>smart00360 RRM RNA recognition motif.
Probab=27.82 E-value=1.5e+02 Score=18.05 Aligned_cols=39 Identities=26% Similarity=0.315 Sum_probs=28.6
Q ss_pred hHHHHHHHHHhCCceEEecCC---------eeEEEecCHHHHHHHHHh
Q 040285 55 HKSLAKLAKIHGPIMSLKFGQ---------VTTVVFSSAAMAKEILQN 93 (298)
Q Consensus 55 ~~~~~~~~~~yG~i~~~~~g~---------~~~vvv~~~~~~~evL~~ 93 (298)
...+.++.++||++..+++-. .-.|-..+++.+..++..
T Consensus 10 ~~~l~~~f~~~g~v~~~~i~~~~~~~~~~~~a~v~f~~~~~a~~a~~~ 57 (71)
T smart00360 10 EEELRELFSKFGKIESVRLVRDKDTGKSKGFAFVEFESEEDAEKALEA 57 (71)
T ss_pred HHHHHHHHHhhCCEeEEEEEeCCCCCCCCceEEEEeCCHHHHHHHHHH
Confidence 356777888999988777643 335667889999888754
No 60
>PF07912 ERp29_N: ERp29, N-terminal domain; InterPro: IPR012883 ERp29 (P52555 from SWISSPROT) is a ubiquitously expressed endoplasmic reticulum protein, and is involved in the processes of protein maturation and protein secretion in this organelle [, ]. The protein exists as a homodimer, with each monomer being composed of two domains. The N-terminal domain featured in this family is organised into a thioredoxin-like fold that resembles the a domain of human protein disulphide isomerase (PDI) []. However, this domain lacks the C-X-X-C motif required for the redox function of PDI; it is therefore thought that the function of ERp29 is similar to the chaperone function of PDI []. The N-terminal domain is exclusively responsible for the homodimerisation of the protein, without covalent linkages or additional contacts with other domains []. ; GO: 0009306 protein secretion, 0005788 endoplasmic reticulum lumen; PDB: 2QC7_B 1G7E_A 2C0G_B 1OVN_A 2C0F_A 2C0E_A 2C1Y_B.
Probab=27.59 E-value=2.3e+02 Score=21.36 Aligned_cols=44 Identities=16% Similarity=0.249 Sum_probs=28.2
Q ss_pred HHHHHHhC------CceEEecCC-eeEEEe-----cCHHHHHHHHHhCCccccccC
Q 040285 59 AKLAKIHG------PIMSLKFGQ-VTTVVF-----SSAAMAKEILQNQDTSFCNRT 102 (298)
Q Consensus 59 ~~~~~~yG------~i~~~~~g~-~~~vvv-----~~~~~~~evL~~~~~~f~~Rp 102 (298)
.+++++|| |++.+..|+ .+.|-. -..+.++..+..+...|-++|
T Consensus 71 ~~Laery~i~ke~fPv~~LF~~~~~~pv~~p~~~~~t~~~l~~fvk~~t~~yiglp 126 (126)
T PF07912_consen 71 MELAERYKIDKEDFPVIYLFVGDKEEPVRYPFDGDVTADNLQRFVKSNTGLYIGLP 126 (126)
T ss_dssp HHHHHHTT-SCCC-SEEEEEESSTTSEEEE-TCS-S-HHHHHHHHHHTSS--TTST
T ss_pred HHHHHHhCCCcccCCEEEEecCCCCCCccCCccCCccHHHHHHHHHhCCCeeecCC
Confidence 47888997 788877754 555544 345777887777766766654
No 61
>cd00590 RRM RRM (RNA recognition motif), also known as RBD (RNA binding domain) or RNP (ribonucleoprotein domain), is a highly abundant domain in eukaryotes found in proteins involved in post-transcriptional gene expression processes including mRNA and rRNA processing, RNA export, and RNA stability. This domain is 90 amino acids in length and consists of a four-stranded beta-sheet packed against two alpha-helices. RRM usually interacts with ssRNA, but is also known to interact with ssDNA as well as proteins. RRM binds a variable number of nucleotides, ranging from two to eight. The active site includes three aromatic side-chains located within the conserved RNP1 and RNP2 motifs of the domain. The RRM domain is found in a variety heterogeneous nuclear ribonucleoproteins (hnRNPs), proteins implicated in regulation of alternative splicing, and protein components of small nuclear ribonucleoproteins (snRNPs).
Probab=27.23 E-value=1.6e+02 Score=18.17 Aligned_cols=41 Identities=20% Similarity=0.254 Sum_probs=30.6
Q ss_pred hHHHHHHHHHhCCceEEecCCe--------eEEEecCHHHHHHHHHhCC
Q 040285 55 HKSLAKLAKIHGPIMSLKFGQV--------TTVVFSSAAMAKEILQNQD 95 (298)
Q Consensus 55 ~~~~~~~~~~yG~i~~~~~g~~--------~~vvv~~~~~~~evL~~~~ 95 (298)
...+.++.++||++..+++-.. -.|-..+++.++.++..-.
T Consensus 13 ~~~i~~~~~~~g~i~~~~~~~~~~~~~~~~~~v~f~s~~~a~~a~~~~~ 61 (74)
T cd00590 13 EEDLRELFSKFGKVESVRIVRDKDTKSKGFAFVEFEDEEDAEKALEALN 61 (74)
T ss_pred HHHHHHHHHhcCCEEEEEEeeCCCCCcceEEEEEECCHHHHHHHHHHhC
Confidence 4678888899999888776542 3566789999999886543
No 62
>PF14605 Nup35_RRM_2: Nup53/35/40-type RNA recognition motif
Probab=26.28 E-value=1.7e+02 Score=18.13 Aligned_cols=34 Identities=12% Similarity=0.089 Sum_probs=23.8
Q ss_pred HHHHHHHHhCCceEEecC-CeeEEEec--CHHHHHHH
Q 040285 57 SLAKLAKIHGPIMSLKFG-QVTTVVFS--SAAMAKEI 90 (298)
Q Consensus 57 ~~~~~~~~yG~i~~~~~g-~~~~vvv~--~~~~~~ev 90 (298)
...+..+.+|.|...+++ ..+.+.+. +...++.+
T Consensus 16 ~vl~~F~~fGeI~~~~~~~~~~~~~l~y~~~~~ae~A 52 (53)
T PF14605_consen 16 EVLEHFASFGEIVDIYVPESTNWMYLKYKSRKDAEKA 52 (53)
T ss_pred HHHHHHHhcCCEEEEEcCCCCcEEEEEECCHHHHHhh
Confidence 344455679999999998 46777666 66666554
No 63
>PF08780 NTase_sub_bind: Nucleotidyltransferase substrate binding protein like; InterPro: IPR010235 The member of this family from Haemophilus influenzae, HI0074, has been shown by crystal structure to resemble nucleotidyltransferase substrate binding proteins []. It forms a complex with HI0073 (P43933 from SWISSPROT), encoded by the adjacent gene, which contains a nucleotidyltransferase nucleotide binding domain (IPR002934 from INTERPRO). Double- and single-stranded DNA binding assays showed no evidence of DNA binding to HI0074 or to HI0073/HI0074 complex despite the suggestive shape of the putative binding cleft formed by the HI0074 dimer []. ; PDB: 1WWP_A 1JOG_A 1WTY_C 2YWA_B.
Probab=25.20 E-value=2e+02 Score=21.48 Aligned_cols=26 Identities=12% Similarity=0.378 Sum_probs=17.3
Q ss_pred cCCCChhHHHHHHH--HHhhcCChhHHh
Q 040285 119 WLPVATLWRNLRKI--CNSHAFSSRQLD 144 (298)
Q Consensus 119 ~~~~g~~Wk~~Rr~--l~~~~f~~~~l~ 144 (298)
++.+++.|..+++. ..+|.++.....
T Consensus 74 lI~d~e~Wl~m~~~RN~tsHtYde~~a~ 101 (124)
T PF08780_consen 74 LIDDGEIWLDMLEDRNLTSHTYDEETAE 101 (124)
T ss_dssp SSSHHHHHHHHHHHHHHGGGTTSHHHHH
T ss_pred CCCCHHHHHHHHHHhccccCCCCHHHHH
Confidence 34789999998855 335666665443
No 64
>PF15269 zf-C2H2_7: Zinc-finger
Probab=24.03 E-value=66 Score=19.29 Aligned_cols=16 Identities=19% Similarity=0.266 Sum_probs=10.7
Q ss_pred CCCCCCCCCCCCCcee
Q 040285 29 SGSRRLPPGPTPYPVI 44 (298)
Q Consensus 29 ~~~~~~pPgP~~~Pil 44 (298)
.++.-..|.|+|-|+-
T Consensus 5 pkkphyiprp~gkp~~ 20 (54)
T PF15269_consen 5 PKKPHYIPRPPGKPFK 20 (54)
T ss_pred CCCCCcCCCCCCCCcc
Confidence 3444567888888763
No 65
>PF09802 Sec66: Preprotein translocase subunit Sec66; InterPro: IPR018624 Members of this family of proteins are a component of the heterotetrameric Sec62/63 complex composed of SEC62, SEC63, SEC66 and SEC72. The Sec62/63 complex associates with the Sec61 complex to form the Sec complex. Sec 66 is involved in SRP-independent post-translational translocation across the endoplasmic reticulum and functions together with the Sec61 complex and KAR2 in a channel-forming translocon complex. Furthermore, Sec66 is also required for growth at elevated temperatures [, , , ].
Probab=23.17 E-value=64 Score=26.27 Aligned_cols=25 Identities=12% Similarity=-0.011 Sum_probs=16.0
Q ss_pred chHHHHHHHHHHHHHHHHHhhccCC
Q 040285 6 CVPWLLFSWILVVALNYFSRGFKSG 30 (298)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~ 30 (298)
+||++-++.++..+.+|-+.+|+++
T Consensus 7 ~~P~~Y~~vl~~sl~~Fs~~YRkr~ 31 (190)
T PF09802_consen 7 YTPLAYVAVLVGSLATFSSIYRKRK 31 (190)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5788877776766666655554433
No 66
>PRK02302 hypothetical protein; Provisional
Probab=22.01 E-value=1.9e+02 Score=20.32 Aligned_cols=32 Identities=13% Similarity=0.079 Sum_probs=25.2
Q ss_pred HHHhCCceEEecCCeeEEEecCHHHHHHHHHh
Q 040285 62 AKIHGPIMSLKFGQVTTVVFSSAAMAKEILQN 93 (298)
Q Consensus 62 ~~~yG~i~~~~~g~~~~vvv~~~~~~~evL~~ 93 (298)
-++||+|.-..=-..-+|+-.|-+.+.++..+
T Consensus 23 LrkfG~I~Y~Skk~kYvvlYvn~~~~e~~~~k 54 (89)
T PRK02302 23 LSKYGDIVYHSKRSRYLVLYVNKEDVEQKLEE 54 (89)
T ss_pred HhhcCcEEEEeccccEEEEEECHHHHHHHHHH
Confidence 46899998876666777788888888888865
No 67
>TIGR01659 sex-lethal sex-lethal family splicing factor. This model describes the sex-lethal family of splicing factors found in Dipteran insects. The sex-lethal phenotype, however, may be limited to the Melanogasters and closely related species. In Drosophila the protein acts as an inhibitor of splicing. This subfamily is most closely related to the ELAV/HUD subfamily of splicing factors (TIGR01661).
Probab=21.67 E-value=2.5e+02 Score=25.29 Aligned_cols=52 Identities=19% Similarity=0.163 Sum_probs=37.8
Q ss_pred CceecccCCCCCCchHHHHHHHHHhCCceEEecCC---------eeEEEecCHHHHHHHHHhC
Q 040285 41 YPVIGNLLELGDKPHKSLAKLAKIHGPIMSLKFGQ---------VTTVVFSSAAMAKEILQNQ 94 (298)
Q Consensus 41 ~PilGnl~~l~~~~~~~~~~~~~~yG~i~~~~~g~---------~~~vvv~~~~~~~evL~~~ 94 (298)
--+||||..- -..+.+.++..+||.|..+.+-. .=.|-..+.+.|.+++..-
T Consensus 195 ~lfV~nLp~~--vtee~L~~~F~~fG~V~~v~i~~d~~tg~~kG~aFV~F~~~e~A~~Ai~~l 255 (346)
T TIGR01659 195 NLYVTNLPRT--ITDDQLDTIFGKYGQIVQKNILRDKLTGTPRGVAFVRFNKREEAQEAISAL 255 (346)
T ss_pred eeEEeCCCCc--ccHHHHHHHHHhcCCEEEEEEeecCCCCccceEEEEEECCHHHHHHHHHHh
Confidence 3567887542 22467888999999998877643 2378888999999988753
No 68
>TIGR01622 SF-CC1 splicing factor, CC1-like family. A homologous gene from Plasmodium falciparum was identified in the course of the analysis of that genome at TIGR and was included in the model.
Probab=21.64 E-value=3e+02 Score=25.47 Aligned_cols=60 Identities=13% Similarity=0.064 Sum_probs=44.9
Q ss_pred CceecccCCCCCCchHHHHHHHHHhCCceEEecC---------CeeEEEecCHHHHHHHHHhCCccccccC
Q 040285 41 YPVIGNLLELGDKPHKSLAKLAKIHGPIMSLKFG---------QVTTVVFSSAAMAKEILQNQDTSFCNRT 102 (298)
Q Consensus 41 ~PilGnl~~l~~~~~~~~~~~~~~yG~i~~~~~g---------~~~~vvv~~~~~~~evL~~~~~~f~~Rp 102 (298)
--++||+..= --...+.++..+||+|..+++- +.-.|-..+.+.|..++.-.+..+.+++
T Consensus 91 ~l~V~nlp~~--~~~~~l~~~F~~~G~v~~v~i~~d~~~~~skg~afVeF~~~e~A~~Al~l~g~~~~g~~ 159 (457)
T TIGR01622 91 TVFVLQLALK--ARERDLYEFFSKVGKVRDVQCIKDRNSRRSKGVAYVEFYDVESVIKALALTGQMLLGRP 159 (457)
T ss_pred EEEEeCCCCC--CCHHHHHHHHHhcCCeeEEEEeecCCCCCcceEEEEEECCHHHHHHHHHhCCCEECCee
Confidence 3568888542 2245678888999999887773 3458889999999999987777777765
No 69
>cd00418 GlxRS_core catalytic core domain of glutamyl-tRNA and glutaminyl-tRNA synthetase. Glutamyl-tRNA synthetase(GluRS)/Glutaminyl-tRNA synthetase (GlnRS) cataytic core domain. These enzymes attach Glu or Gln, respectively, to the appropriate tRNA. Like other class I tRNA synthetases, they aminoacylate the 2'-OH of the nucleotide at the 3' end of the tRNA. The core domain is based on the Rossman fold and is responsible for the ATP-dependent formation of the enzyme bound aminoacyl-adenylate. It contains the characteristic class I HIGH and KMSKS motifs, which are involved in ATP binding. These enzymes function as monomers. Archaea, cellular organelles, and some bacteria lack GlnRS. In these cases, the "non-discriminating" form of GluRS aminoacylates both tRNA(Glu) and tRNA(Gln) with Glu, which is converted to Gln when appropriate by a transamidation enzyme. The discriminating form of GluRS differs from GlnRS and the non-discriminating form of GluRS in their C-terminal anti-codon bind
Probab=21.60 E-value=89 Score=26.33 Aligned_cols=55 Identities=24% Similarity=0.260 Sum_probs=36.3
Q ss_pred CCCCCCCCCCceecccCCCCCCchHHHHHHHHHhCCceEEecCCeeEEEecCHHHHHHHHH
Q 040285 32 RRLPPGPTPYPVIGNLLELGDKPHKSLAKLAKIHGPIMSLKFGQVTTVVFSSAAMAKEILQ 92 (298)
Q Consensus 32 ~~~pPgP~~~PilGnl~~l~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~~~~~~evL~ 92 (298)
-|.+|.|.|..-+||+.... .=...+++||.-|-+++=.++. -=+.++.+++++.
T Consensus 4 ~RFAPsPtG~lHlG~~r~al-----~n~l~Ar~~~G~~iLRieDtD~-~R~~~~~~~~I~~ 58 (230)
T cd00418 4 TRFAPSPTGYLHIGHARTAL-----FNFAFARKYGGKFILRIEDTDP-ERSRPEYVESILE 58 (230)
T ss_pred EEeCCCCCCcccHHHHHHHH-----HHHHHHHHcCCeEEEEeCcCCC-CCCChHHHHHHHH
Confidence 36899999999999985421 1123578898877777765443 2255566666654
No 70
>PF08114 PMP1_2: ATPase proteolipid family; InterPro: IPR012589 This family consists of small proteolipids associated with the plasma membrane H+ ATPase. Two proteolipids (PMP1 and PMP2) are associated with the ATPase and both genes are similarly expressed in the wild-type strain of yeast. No modification of the level of transcription of one PMP gene is detected in a strain deleted of the other. Though both proteolipids show similarity with other small proteolipids associated with other cation -transporting ATPases, their functions remain unclear [].
Probab=21.30 E-value=66 Score=18.91 Aligned_cols=19 Identities=0% Similarity=-0.211 Sum_probs=9.9
Q ss_pred HHHHHHHHHHHHHHHHhhc
Q 040285 9 WLLFSWILVVALNYFSRGF 27 (298)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~ 27 (298)
++++..++.+++...+.++
T Consensus 13 VF~lVglv~i~iva~~iYR 31 (43)
T PF08114_consen 13 VFCLVGLVGIGIVALFIYR 31 (43)
T ss_pred ehHHHHHHHHHHHHHHHHH
Confidence 3455555555555544443
No 71
>PF10883 DUF2681: Protein of unknown function (DUF2681); InterPro: IPR020274 This entry contains membrane proteins with no known function.
Probab=21.16 E-value=1.3e+02 Score=21.09 Aligned_cols=11 Identities=18% Similarity=0.437 Sum_probs=4.0
Q ss_pred HHHHHHHHHHH
Q 040285 12 FSWILVVALNY 22 (298)
Q Consensus 12 ~~~~~~~~~~~ 22 (298)
+++++++++.|
T Consensus 10 ~~~v~~~i~~y 20 (87)
T PF10883_consen 10 VGAVVALILAY 20 (87)
T ss_pred HHHHHHHHHHH
Confidence 33333333333
No 72
>PF03967 PRCH: Photosynthetic reaction centre, H-chain N-terminal region; InterPro: IPR015810 The photosynthetic apparatus in non-oxygenic bacteria consists of light-harvesting (LH) protein-pigment complexes LH1 and LH2, which use carotenoid and bacteriochlorophyll as primary donors []. LH1 acts as the energy collection hub, temporarily storing it before its transfer to the photosynthetic reaction centre (RC) []. Electrons are transferred from the primary donor via an intermediate acceptor (bacteriopheophytin) to the primary acceptor (quinine Qa), and finally to the secondary acceptor (quinone Qb), resulting in the formation of ubiquinol QbH2. RC uses the excitation energy to shuffle electrons across the membrane, transferring them via ubiquinol to the cytochrome bc1 complex in order to establish a proton gradient across the membrane, which is used by ATP synthetase to form ATP [, , ]. The core complex is anchored in the cell membrane, consisting of one unit of RC surrounded by LH1; in some species there may be additional subunits []. RC consists of three subunits: L (light), M (medium), and H (heavy). Subunits L and M provide the scaffolding for the chromophore, while subunit H contains a cytoplasmic domain []. In Rhodopseudomonas viridis, there is also a non-membranous tetrahaem cytochrome (4Hcyt) subunit on the periplasmic surface. This entry represents the N-terminal domain of the photosynthetic reaction centre H subunit, which includes the transmembrane domain and part of the cytoplasmic domain [].; GO: 0045156 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity, 0019684 photosynthesis, light reaction, 0030077 plasma membrane light-harvesting complex; PDB: 1RZZ_H 1PST_H 2J8D_H 3DUQ_H 1FNP_H 1KBY_H 1E14_H 2HG3_H 1UMX_H 1YST_H ....
Probab=20.92 E-value=1.2e+02 Score=23.17 Aligned_cols=24 Identities=25% Similarity=0.538 Sum_probs=14.5
Q ss_pred CCcccchHHHHHHHHHHHHHHHHHhh
Q 040285 1 MDMVSCVPWLLFSWILVVALNYFSRG 26 (298)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 26 (298)
+|.-..|+|++- +.++.++|++++
T Consensus 10 ~DvAql~lyaFw--iFFagLi~YLrr 33 (136)
T PF03967_consen 10 FDVAQLVLYAFW--IFFAGLIYYLRR 33 (136)
T ss_dssp CCHHHHHHHHHH--HHHHHHHHHHHH
T ss_pred ccHHHHHHHHHH--HHHHHHHHHHhc
Confidence 355555565544 566666777775
No 73
>PRK02886 hypothetical protein; Provisional
Probab=20.20 E-value=2.3e+02 Score=19.89 Aligned_cols=32 Identities=9% Similarity=0.204 Sum_probs=25.2
Q ss_pred HHHhCCceEEecCCeeEEEecCHHHHHHHHHh
Q 040285 62 AKIHGPIMSLKFGQVTTVVFSSAAMAKEILQN 93 (298)
Q Consensus 62 ~~~yG~i~~~~~g~~~~vvv~~~~~~~evL~~ 93 (298)
-++||+|.-+.=-..-+|+-.|-+.+.++..+
T Consensus 21 LrkyG~I~Y~Skr~kYvvlYvn~~~~e~~~~k 52 (87)
T PRK02886 21 LRKFGNVHYVSKRLKYAVLYCDMEQVEDIMNK 52 (87)
T ss_pred HhhcCcEEEEeccccEEEEEECHHHHHHHHHH
Confidence 36899998876666777788888888888865
No 74
>TIGR01659 sex-lethal sex-lethal family splicing factor. This model describes the sex-lethal family of splicing factors found in Dipteran insects. The sex-lethal phenotype, however, may be limited to the Melanogasters and closely related species. In Drosophila the protein acts as an inhibitor of splicing. This subfamily is most closely related to the ELAV/HUD subfamily of splicing factors (TIGR01661).
Probab=20.06 E-value=4e+02 Score=23.93 Aligned_cols=48 Identities=23% Similarity=0.328 Sum_probs=34.2
Q ss_pred hHHHHHHHHHhCCceEEecCC---------eeEEEecCHHHHHHHHHh-CCccccccC
Q 040285 55 HKSLAKLAKIHGPIMSLKFGQ---------VTTVVFSSAAMAKEILQN-QDTSFCNRT 102 (298)
Q Consensus 55 ~~~~~~~~~~yG~i~~~~~g~---------~~~vvv~~~~~~~evL~~-~~~~f~~Rp 102 (298)
.+.+.++.++||+|..+++-. .=.|-..+++.|++++.. ++..+.+++
T Consensus 121 e~~L~~lF~~~G~V~~v~i~~d~~tg~srGyaFVeF~~~e~A~~Ai~~LnG~~l~gr~ 178 (346)
T TIGR01659 121 DRELYALFRTIGPINTCRIMRDYKTGYSFGYAFVDFGSEADSQRAIKNLNGITVRNKR 178 (346)
T ss_pred HHHHHHHHHhcCCEEEEEEEecCCCCccCcEEEEEEccHHHHHHHHHHcCCCccCCce
Confidence 357888889999998887632 356777899999998864 444555554
Done!