BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 040291
         (160 letters)

Database: pdbaa 
           62,578 sequences; 14,973,337 total letters

Searching..................................................done



>pdb|2PQ6|A Chain A, Crystal Structure Of Medicago Truncatula Ugt85h2- Insights
           Into The Structural Basis Of A Multifunctional (Iso)
           Flavonoid Glycosyltransferase
          Length = 482

 Score = 94.7 bits (234), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 52/161 (32%), Positives = 90/161 (55%), Gaps = 6/161 (3%)

Query: 3   RPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKRIMESLEGKN-DLGEQIR 61
           +PHV+++P P QGH+ PL + ++ L  +GF +TFVNT+Y+HKR+++S   K  D      
Sbjct: 8   KPHVVMIPYPVQGHINPLFKLAKLLHLRGFHITFVNTEYNHKRLLKSRGPKAFDGFTDFN 67

Query: 62  LVSIPDGMEPWEDRNDFGK----LFEKVLQVMPGKLEELIEDIN-SREDEKLDCFIADGY 116
             SIPDG+ P E   D  +    L + V +       EL+  +N S     + C ++D  
Sbjct: 68  FESIPDGLTPMEGDGDVSQDVPTLCQSVRKNFLKPYCELLTRLNHSTNVPPVTCLVSDCC 127

Query: 117 MAWSMEVAKKMNVRGALFWPSSAASVALLFHIPKLIDDGII 157
           M+++++ A++  +   L++ SSA S+  + H    ++ GII
Sbjct: 128 MSFTIQAAEEFELPNVLYFSSSACSLLNVMHFRSFVERGII 168


>pdb|2VCE|A Chain A, Characterization And Engineering Of The Bifunctional N-
           And O-glucosyltransferase Involved In Xenobiotic
           Metabolism In Plants
 pdb|2VCH|A Chain A, Characterization And Engineering Of The Bifunctional N-
           And O-Glucosyltransferase Involved In Xenobiotic
           Metabolism In Plants
 pdb|2VG8|A Chain A, Characterization And Engineering Of The Bifunctional N-
           And O-Glucosyltransferase Involved In Xenobiotic
           Metabolism In Plants
          Length = 480

 Score = 50.8 bits (120), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 43/167 (25%), Positives = 72/167 (43%), Gaps = 38/167 (22%)

Query: 4   PHVLVLPIPAQGHVIPLLEFSQCLAK-QGFRVTFVNTDYDHKRIMESLEGKNDLGEQIRL 62
           PHV ++P P  GH+IPL+EF++ L    G  VTFV             EG     ++  L
Sbjct: 7   PHVAIIPSPGMGHLIPLVEFAKRLVHLHGLTVTFVIAG----------EGPPSKAQRTVL 56

Query: 63  VSIPDGME----PWEDRNDFGKLFEKVLQVMPGKLEELIEDINSREDEKL----DCFIAD 114
            S+P  +     P  D  D              ++E  I    +R + +L    D F+  
Sbjct: 57  DSLPSSISSVFLPPVDLTDLSS---------STRIESRISLTVTRSNPELRKVFDSFVEG 107

Query: 115 GYMAWSM----------EVAKKMNVRGALFWPSSAASVALLFHIPKL 151
           G +  ++          +VA + +V   +F+P++A  ++   H+PKL
Sbjct: 108 GRLPTALVVDLFGTDAFDVAVEFHVPPYIFYPTTANVLSFFLHLPKL 154


>pdb|3HBF|A Chain A, Structure Of Ugt78g1 Complexed With Myricetin And Udp
 pdb|3HBJ|A Chain A, Structure Of Ugt78g1 Complexed With Udp
          Length = 454

 Score = 33.5 bits (75), Expect = 0.055,   Method: Compositional matrix adjust.
 Identities = 30/149 (20%), Positives = 67/149 (44%), Gaps = 6/149 (4%)

Query: 2   NRPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKRIMESLEGK-NDLGEQI 60
           N  HV VL  P   H  PLL   + +A +  +VTF           ++L  + N+    I
Sbjct: 12  NLLHVAVLAFPFGTHAAPLLSLVKKIATEAPKVTFSFFCTTTTN--DTLFSRSNEFLPNI 69

Query: 61  RLVSIPDGM-EPWEDRNDFGKLFEKVLQVMPGKLEELIEDINSREDEKLDCFIADGYMAW 119
           +  ++ DG+ + +    +  +     ++ M    + +I++  +   + + C + D +  +
Sbjct: 70  KYYNVHDGLPKGYVSSGNPREPIFLFIKAMQENFKHVIDEAVAETGKNITCLVTDAFFWF 129

Query: 120 SMEVAKKMNVRGALFWPSSAASVALLFHI 148
             ++A++M+ +    W  +A   +LL H+
Sbjct: 130 GADLAEEMHAKWVPLW--TAGPHSLLTHV 156


>pdb|2IYA|A Chain A, The Crystal Structure Of Macrolide Glycosyltransferases: A
           Blueprint For Antibiotic Engineering
 pdb|2IYA|B Chain B, The Crystal Structure Of Macrolide Glycosyltransferases: A
           Blueprint For Antibiotic Engineering
          Length = 424

 Score = 33.1 bits (74), Expect = 0.067,   Method: Compositional matrix adjust.
 Identities = 24/95 (25%), Positives = 42/95 (44%), Gaps = 1/95 (1%)

Query: 5   HVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKRIMESLEGKNDLGEQIRLVS 64
           H+    IP  GHV P L   Q L  +G RV++  TD    ++  +          +   S
Sbjct: 14  HISFFNIPGHGHVNPSLGIVQELVARGHRVSYAITDEFAAQVKAAGATPVVYDSILPKES 73

Query: 65  IPDGMEPWEDRNDFGKLFEKVLQVMPGKLEELIED 99
            P+   P +  +  G   ++ ++V+P +LE+   D
Sbjct: 74  NPEESWPEDQESAMGLFLDEAVRVLP-QLEDAYAD 107


>pdb|3IA7|A Chain A, Crystal Structure Of Calg4, The Calicheamicin
          Glycosyltransferase
 pdb|3IA7|B Chain B, Crystal Structure Of Calg4, The Calicheamicin
          Glycosyltransferase
          Length = 402

 Score = 32.7 bits (73), Expect = 0.085,   Method: Compositional matrix adjust.
 Identities = 14/35 (40%), Positives = 20/35 (57%)

Query: 5  HVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNT 39
          H+L   +   GHV P L     LA++G R+T+V T
Sbjct: 6  HILFANVQGHGHVYPSLGLVSELARRGHRITYVTT 40


>pdb|2IYF|A Chain A, The Crystal Structure Of Macrolide Glycosyltransferases:
          A Blueprint For Antibiotic Engineering
 pdb|2IYF|B Chain B, The Crystal Structure Of Macrolide Glycosyltransferases:
          A Blueprint For Antibiotic Engineering
          Length = 430

 Score = 30.8 bits (68), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 14/33 (42%), Positives = 19/33 (57%)

Query: 5  HVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFV 37
          H+ +  I A GHV P LE  + L  +G RVT+ 
Sbjct: 9  HIAMFSIAAHGHVNPSLEVIRELVARGHRVTYA 41


>pdb|4GKL|A Chain A, Crystal Structure Of A Noncanonic Maltogenic Alpha-amylase
           Amyb From Thermotoga Neapolitana
 pdb|4GKL|B Chain B, Crystal Structure Of A Noncanonic Maltogenic Alpha-amylase
           Amyb From Thermotoga Neapolitana
          Length = 422

 Score = 30.0 bits (66), Expect = 0.64,   Method: Compositional matrix adjust.
 Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 4/43 (9%)

Query: 30  QGFRVTFVNTDYD-HKRIMESLEGKNDLGEQIRLVSIPDGMEP 71
           Q F +T+   DYD + R  + +EGKN L E I  + + D M P
Sbjct: 205 QAFDITY---DYDGYYRFRDFIEGKNSLREYIDFLRMQDHMYP 244


>pdb|2C1X|A Chain A, Structure And Activity Of A Flavonoid 3-O
           Glucosyltransferase Reveals The Basis For Plant Natural
           Product Modification
 pdb|2C1Z|A Chain A, Structure And Activity Of A Flavonoid 3-O
           Glucosyltransferase Reveals The Basis For Plant Natural
           Product Modification
 pdb|2C9Z|A Chain A, Structure And Activity Of A Flavonoid 3-0
           Glucosyltransferase Reveals The Basis For Plant Natural
           Product Modification
          Length = 456

 Score = 28.9 bits (63), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 34/157 (21%), Positives = 60/157 (38%), Gaps = 19/157 (12%)

Query: 2   NRPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRV--TFVNTDYDHKRIMESLEGKNDLGEQ 59
             PHV VL  P   H  PLL   + LA        +F +T   +  I    +  + +   
Sbjct: 6   TNPHVAVLAFPFSTHAAPLLAVVRRLAAAAPHAVFSFFSTSQSNASIFH--DSMHTMQCN 63

Query: 60  IRLVSIPDGM--------EPWEDRNDFGKLFEKVLQVMPGKLEELIEDINSREDEKLDCF 111
           I+   I DG+         P ED        E   +  P    + +    +     + C 
Sbjct: 64  IKSYDISDGVPEGYVFAGRPQED-------IELFTRAAPESFRQGMVMAVAETGRPVSCL 116

Query: 112 IADGYMAWSMEVAKKMNVRGALFWPSSAASVALLFHI 148
           +AD ++ ++ ++A +M V    FW +   S++   +I
Sbjct: 117 VADAFIWFAADMAAEMGVAWLPFWTAGPNSLSTHVYI 153


>pdb|1OAH|A Chain A, Cytochrome C Nitrite Reductase From Desulfovibrio
           Desulfuricans Atcc 27774:  The Relevance Of The Two
           Calcium Sites In The Structure Of The Catalytic Subunit
           (Nrfa).
 pdb|1OAH|B Chain B, Cytochrome C Nitrite Reductase From Desulfovibrio
           Desulfuricans Atcc 27774:  The Relevance Of The Two
           Calcium Sites In The Structure Of The Catalytic Subunit
           (Nrfa)
          Length = 519

 Score = 28.1 bits (61), Expect = 2.0,   Method: Composition-based stats.
 Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 8/82 (9%)

Query: 80  KLFEKVL--QVMPGKLEELIEDINSREDEKLDCFIADGYMAWSMEVAKKMNVRGALFWPS 137
           K F+++L  Q M  K  E +   N+ E  +     A  Y A   E A++M  +G LFW  
Sbjct: 371 KTFDQLLKAQEMSVKAHEAVRLANAYEGHR-----AANYEALMAE-AREMVRKGQLFWDY 424

Query: 138 SAASVALLFHIPKLIDDGIIDS 159
            +A  ++ FH P    D ++ S
Sbjct: 425 VSAENSVGFHNPAKALDTLMTS 446


>pdb|1SQI|A Chain A, Structural Basis For Inhibitor Selectivity Revealed By
           Crystal Structures Of Plant And Mammalian 4-
           Hydroxyphenylpyruvate Dioxygenases
 pdb|1SQI|B Chain B, Structural Basis For Inhibitor Selectivity Revealed By
           Crystal Structures Of Plant And Mammalian 4-
           Hydroxyphenylpyruvate Dioxygenases
          Length = 393

 Score = 28.1 bits (61), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 13/32 (40%), Positives = 17/32 (53%)

Query: 70  EPWEDRNDFGKLFEKVLQVMPGKLEELIEDIN 101
           EPW + + FGK+   VLQ        L+E IN
Sbjct: 120 EPWVEEDKFGKVKFAVLQTYGDTTHTLVEKIN 151


>pdb|3P56|C Chain C, The Structure Of The Human Rnase H2 Complex Defines Key
           Interaction Interfaces Relevant To Enzyme Function And
           Human Disease
 pdb|3P56|F Chain F, The Structure Of The Human Rnase H2 Complex Defines Key
           Interaction Interfaces Relevant To Enzyme Function And
           Human Disease
          Length = 164

 Score = 27.3 bits (59), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 12/29 (41%), Positives = 16/29 (55%), Gaps = 2/29 (6%)

Query: 116 YMAWSMEV--AKKMNVRGALFWPSSAASV 142
           +  W +E        VRGAL WPS AA++
Sbjct: 129 FTLWGLETIPGPDAKVRGALTWPSLAAAI 157


>pdb|2ACW|A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 Complexed
           With Udp-Glucose
 pdb|2ACW|B Chain B, Crystal Structure Of Medicago Truncatula Ugt71g1 Complexed
           With Udp-Glucose
          Length = 465

 Score = 27.3 bits (59), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 26/150 (17%), Positives = 60/150 (40%), Gaps = 13/150 (8%)

Query: 6   VLVLPIPAQGHVIPLLEFSQCLAKQG-------FRVTFVNTDYDHKRIMESLEGKNDLGE 58
           ++ +P P  GH+   LEF++ L           F + F    +    I   L  +     
Sbjct: 12  LIFIPAPGIGHLASALEFAKLLTNHDKNLYITVFCIKFPGMPFADSYIKSVLASQ----P 67

Query: 59  QIRLVSIPDGMEPWEDRNDFGKLFEKVLQVMPGKLEELIEDINSREDEKLDCFIADGYMA 118
           QI+L+ +P+   P ++     + +  +L  +   +  +   I +    K+   + D +  
Sbjct: 68  QIQLIDLPEVEPPPQELLKSPEFY--ILTFLESLIPHVKATIKTILSNKVVGLVLDFFCV 125

Query: 119 WSMEVAKKMNVRGALFWPSSAASVALLFHI 148
             ++V  +  +   LF  S+   ++L+  +
Sbjct: 126 SMIDVGNEFGIPSYLFLTSNVGFLSLMLSL 155


>pdb|3IAA|A Chain A, Crystal Structure Of Calg2, Calicheamicin
          Glycosyltransferase, Tdp Bound Form
 pdb|3IAA|B Chain B, Crystal Structure Of Calg2, Calicheamicin
          Glycosyltransferase, Tdp Bound Form
          Length = 416

 Score = 27.3 bits (59), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 10/35 (28%), Positives = 21/35 (60%)

Query: 5  HVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNT 39
          H+L++ + + G ++P L     L ++G RV++V  
Sbjct: 22 HLLIVNVASHGLILPTLTVVTELVRRGHRVSYVTA 56


>pdb|3RSC|A Chain A, Crystal Structure Of Calg2, Calicheamicin
          Glycosyltransferase, Tdp And Calicheamicin T0 Bound
          Form
 pdb|3RSC|B Chain B, Crystal Structure Of Calg2, Calicheamicin
          Glycosyltransferase, Tdp And Calicheamicin T0 Bound
          Form
          Length = 415

 Score = 27.3 bits (59), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 10/35 (28%), Positives = 21/35 (60%)

Query: 5  HVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNT 39
          H+L++ + + G ++P L     L ++G RV++V  
Sbjct: 22 HLLIVNVASHGLILPTLTVVTELVRRGHRVSYVTA 56


>pdb|3ISQ|A Chain A, Crystal Structure Of Human 4-Hydroxyphenylpyruvate
           Dioxygenase
          Length = 393

 Score = 27.3 bits (59), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 12/32 (37%), Positives = 18/32 (56%)

Query: 70  EPWEDRNDFGKLFEKVLQVMPGKLEELIEDIN 101
           EPW +++ FGK+   VLQ        L+E +N
Sbjct: 113 EPWVEQDKFGKVKFAVLQTYGDTTHTLVEKMN 144


>pdb|2ACV|A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1
 pdb|2ACV|B Chain B, Crystal Structure Of Medicago Truncatula Ugt71g1
          Length = 463

 Score = 27.3 bits (59), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 26/150 (17%), Positives = 60/150 (40%), Gaps = 13/150 (8%)

Query: 6   VLVLPIPAQGHVIPLLEFSQCLAKQG-------FRVTFVNTDYDHKRIMESLEGKNDLGE 58
           ++ +P P  GH+   LEF++ L           F + F    +    I   L  +     
Sbjct: 12  LIFIPAPGIGHLASALEFAKLLTNHDKNLYITVFCIKFPGMPFADSYIKSVLASQ----P 67

Query: 59  QIRLVSIPDGMEPWEDRNDFGKLFEKVLQVMPGKLEELIEDINSREDEKLDCFIADGYMA 118
           QI+L+ +P+   P ++     + +  +L  +   +  +   I +    K+   + D +  
Sbjct: 68  QIQLIDLPEVEPPPQELLKSPEFY--ILTFLESLIPHVKATIKTILSNKVVGLVLDFFCV 125

Query: 119 WSMEVAKKMNVRGALFWPSSAASVALLFHI 148
             ++V  +  +   LF  S+   ++L+  +
Sbjct: 126 SMIDVGNEFGIPSYLFLTSNVGFLSLMLSL 155


>pdb|3PUF|C Chain C, Crystal Structure Of Human Rnase H2 Complex
 pdb|3PUF|F Chain F, Crystal Structure Of Human Rnase H2 Complex
 pdb|3PUF|I Chain I, Crystal Structure Of Human Rnase H2 Complex
 pdb|3PUF|L Chain L, Crystal Structure Of Human Rnase H2 Complex
 pdb|3PUF|O Chain O, Crystal Structure Of Human Rnase H2 Complex
 pdb|3PUF|R Chain R, Crystal Structure Of Human Rnase H2 Complex
          Length = 167

 Score = 27.3 bits (59), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 12/29 (41%), Positives = 16/29 (55%), Gaps = 2/29 (6%)

Query: 116 YMAWSMEV--AKKMNVRGALFWPSSAASV 142
           +  W +E        VRGAL WPS AA++
Sbjct: 132 FTLWGLETIPGPDAKVRGALTWPSLAAAI 160


>pdb|3SHF|A Chain A, Crystal Structure Of The R265s Mutant Of Full-Length
           Murine Apaf-1
          Length = 1256

 Score = 26.9 bits (58), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 2/38 (5%)

Query: 83  EKVLQVMPGKLEELIEDINSREDEKLDCFIA--DGYMA 118
           +K LQV   +  E + DI + EDE L C  +  D Y+A
Sbjct: 643 DKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIA 680


>pdb|3SFZ|A Chain A, Crystal Structure Of Full-Length Murine Apaf-1
          Length = 1249

 Score = 26.9 bits (58), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 2/38 (5%)

Query: 83  EKVLQVMPGKLEELIEDINSREDEKLDCFIA--DGYMA 118
           +K LQV   +  E + DI + EDE L C  +  D Y+A
Sbjct: 636 DKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIA 673


>pdb|4EPQ|A Chain A, Canonical Poly(Adp-Ribose) Glycohydrolase Rbpi Inhibitor
           Complex From Tetrahymena Thermophila
          Length = 477

 Score = 26.2 bits (56), Expect = 8.6,   Method: Compositional matrix adjust.
 Identities = 12/42 (28%), Positives = 25/42 (59%), Gaps = 2/42 (4%)

Query: 93  LEELIEDINSREDEKLDCFIADGYMAWSMEVAKKMNVRGALF 134
           L++L++ IN R  EK+ CF    Y+  +++ ++K +    +F
Sbjct: 174 LKDLVQQINIRRQEKIKCFYE--YLKQALDFSEKESKEVVIF 213


>pdb|4EPP|A Chain A, Canonical Poly(Adp-Ribose) Glycohydrolase From Tetrahymena
           Thermophila.
 pdb|4EPP|B Chain B, Canonical Poly(Adp-Ribose) Glycohydrolase From Tetrahymena
           Thermophila
          Length = 477

 Score = 26.2 bits (56), Expect = 8.8,   Method: Compositional matrix adjust.
 Identities = 12/42 (28%), Positives = 25/42 (59%), Gaps = 2/42 (4%)

Query: 93  LEELIEDINSREDEKLDCFIADGYMAWSMEVAKKMNVRGALF 134
           L++L++ IN R  EK+ CF    Y+  +++ ++K +    +F
Sbjct: 174 LKDLVQQINIRRQEKIKCFYE--YLKQALDFSEKESKEVVIF 213


>pdb|2DEP|A Chain A, Crystal Structure Of Xylanase B From Clostridium
           Stercorarium F9
 pdb|2DEP|B Chain B, Crystal Structure Of Xylanase B From Clostridium
           Stercorarium F9
          Length = 356

 Score = 26.2 bits (56), Expect = 8.9,   Method: Compositional matrix adjust.
 Identities = 15/63 (23%), Positives = 33/63 (52%), Gaps = 1/63 (1%)

Query: 44  KRIMESLEGKNDLGEQIRLVSIPDGMEPWEDRNDFG-KLFEKVLQVMPGKLEELIEDINS 102
           +RI+ES++    LG    +  +   +  W DR+D+G  + + +L +   + +EL + +  
Sbjct: 234 ERIIESIKKFAGLGLDNIITELDMSIYSWNDRSDYGDSIPDYILTLQAKRYQELFDALKE 293

Query: 103 RED 105
            +D
Sbjct: 294 NKD 296


>pdb|3IZA|A Chain A, Structure Of An Apoptosome-Procaspase-9 Card Complex
 pdb|3IZA|B Chain B, Structure Of An Apoptosome-Procaspase-9 Card Complex
 pdb|3IZA|C Chain C, Structure Of An Apoptosome-Procaspase-9 Card Complex
 pdb|3IZA|D Chain D, Structure Of An Apoptosome-Procaspase-9 Card Complex
 pdb|3IZA|E Chain E, Structure Of An Apoptosome-Procaspase-9 Card Complex
 pdb|3IZA|F Chain F, Structure Of An Apoptosome-Procaspase-9 Card Complex
 pdb|3IZA|G Chain G, Structure Of An Apoptosome-Procaspase-9 Card Complex
          Length = 1263

 Score = 25.8 bits (55), Expect = 9.8,   Method: Compositional matrix adjust.
 Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 1/52 (1%)

Query: 83  EKVLQVMPGKLEELIEDINSREDEKLDC-FIADGYMAWSMEVAKKMNVRGAL 133
           +K LQV   +  E + +I + EDE L C F  D     +  V KK+ +  ++
Sbjct: 642 DKTLQVFKAETGEKLLEIKAHEDEVLCCAFSTDDRFIATCSVDKKVKIWNSM 693


  Database: pdbaa
    Posted date:  Mar 3, 2013 10:34 PM
  Number of letters in database: 14,973,337
  Number of sequences in database:  62,578
  
Lambda     K      H
   0.321    0.140    0.423 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,978,915
Number of Sequences: 62578
Number of extensions: 199945
Number of successful extensions: 428
Number of sequences better than 100.0: 32
Number of HSP's better than 100.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 408
Number of HSP's gapped (non-prelim): 32
length of query: 160
length of database: 14,973,337
effective HSP length: 91
effective length of query: 69
effective length of database: 9,278,739
effective search space: 640232991
effective search space used: 640232991
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 47 (22.7 bits)