Query 040291
Match_columns 160
No_of_seqs 159 out of 1125
Neff 9.5
Searched_HMMs 29240
Date Mon Mar 25 10:53:41 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/040291.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/040291hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hbf_A Flavonoid 3-O-glucosylt 99.9 2.6E-27 9E-32 187.5 13.5 149 3-154 13-164 (454)
2 2pq6_A UDP-glucuronosyl/UDP-gl 99.9 8E-27 2.7E-31 186.2 13.8 158 1-158 6-169 (482)
3 2vch_A Hydroquinone glucosyltr 99.9 5.9E-23 2E-27 163.9 16.4 147 3-154 6-157 (480)
4 2acv_A Triterpene UDP-glucosyl 99.9 7.9E-23 2.7E-27 162.5 14.4 143 3-152 9-159 (463)
5 2c1x_A UDP-glucose flavonoid 3 99.9 3.1E-22 1.1E-26 158.8 13.7 150 2-153 6-158 (456)
6 2iya_A OLEI, oleandomycin glyc 99.8 2.6E-20 9E-25 145.7 13.4 127 1-139 10-141 (424)
7 4amg_A Snogd; transferase, pol 99.8 3.1E-18 1E-22 132.6 12.3 124 3-139 22-160 (400)
8 3ia7_A CALG4; glycosysltransfe 99.7 1.7E-17 5.8E-22 128.2 11.7 124 1-136 2-132 (402)
9 1iir_A Glycosyltransferase GTF 99.7 1.8E-17 6E-22 129.6 9.6 122 4-138 1-127 (415)
10 2iyf_A OLED, oleandomycin glyc 99.7 7.5E-17 2.6E-21 126.1 12.8 126 1-138 5-135 (430)
11 3rsc_A CALG2; TDP, enediyne, s 99.7 1.7E-16 5.7E-21 123.5 10.4 123 3-137 20-149 (415)
12 1rrv_A Glycosyltransferase GTF 99.6 3.3E-16 1.1E-20 122.3 8.6 122 4-138 1-128 (416)
13 2yjn_A ERYCIII, glycosyltransf 99.6 1E-15 3.4E-20 120.5 11.0 125 2-138 19-175 (441)
14 3oti_A CALG3; calicheamicin, T 99.6 1.4E-14 4.8E-19 112.3 12.5 119 3-137 20-160 (398)
15 2p6p_A Glycosyl transferase; X 99.6 2E-14 6.7E-19 110.8 12.9 123 4-138 1-138 (384)
16 3h4t_A Glycosyltransferase GTF 99.5 5.7E-15 2E-19 115.1 6.7 122 4-139 1-127 (404)
17 4fzr_A SSFS6; structural genom 99.5 2.1E-14 7E-19 111.3 8.9 123 3-137 15-153 (398)
18 3tsa_A SPNG, NDP-rhamnosyltran 99.5 9.2E-14 3.2E-18 107.2 9.6 124 3-138 1-145 (391)
19 3otg_A CALG1; calicheamicin, T 99.4 9E-13 3.1E-17 102.1 9.4 120 3-137 20-160 (412)
20 3s2u_A UDP-N-acetylglucosamine 99.2 5.3E-11 1.8E-15 91.7 10.3 114 2-134 1-121 (365)
21 1f0k_A MURG, UDP-N-acetylgluco 98.7 1.9E-07 6.6E-12 70.8 11.0 117 1-136 2-127 (364)
22 3fro_A GLGA glycogen synthase; 97.4 0.0024 8.3E-08 48.9 11.8 133 2-136 1-153 (439)
23 3c48_A Predicted glycosyltrans 97.3 0.0017 5.9E-08 50.1 9.9 123 3-138 20-155 (438)
24 2iuy_A Avigt4, glycosyltransfe 97.2 0.00054 1.8E-08 51.3 6.1 42 1-42 1-58 (342)
25 2r60_A Glycosyl transferase, g 97.2 0.0025 8.6E-08 50.3 9.9 127 3-138 7-153 (499)
26 3okp_A GDP-mannose-dependent a 97.1 0.0032 1.1E-07 47.6 8.8 107 1-133 2-114 (394)
27 1v4v_A UDP-N-acetylglucosamine 96.4 0.048 1.6E-06 41.1 10.9 112 4-135 6-122 (376)
28 2jjm_A Glycosyl transferase, g 96.3 0.048 1.7E-06 41.3 10.3 113 3-137 15-134 (394)
29 2gek_A Phosphatidylinositol ma 96.2 0.033 1.1E-06 42.1 9.2 41 3-43 20-64 (406)
30 3dzc_A UDP-N-acetylglucosamine 96.2 0.024 8E-07 43.8 8.3 115 1-135 23-142 (396)
31 3ot5_A UDP-N-acetylglucosamine 96.1 0.018 6E-07 44.6 7.4 112 1-135 25-145 (403)
32 2iw1_A Lipopolysaccharide core 95.9 0.057 1.9E-06 40.4 9.0 38 4-41 1-41 (374)
33 3beo_A UDP-N-acetylglucosamine 95.8 0.15 5E-06 38.2 11.2 40 2-42 7-48 (375)
34 1vgv_A UDP-N-acetylglucosamine 95.7 0.051 1.8E-06 40.9 8.2 110 4-136 1-118 (384)
35 2x6q_A Trehalose-synthase TRET 95.2 0.035 1.2E-06 42.4 5.8 42 1-42 38-81 (416)
36 1ccw_A Protein (glutamate muta 94.8 0.07 2.4E-06 35.0 5.6 45 1-45 1-45 (137)
37 1psw_A ADP-heptose LPS heptosy 94.2 0.51 1.8E-05 35.1 9.9 102 4-133 1-106 (348)
38 2x0d_A WSAF; GT4 family, trans 93.9 0.046 1.6E-06 42.4 3.7 39 3-41 46-89 (413)
39 3vue_A GBSS-I, granule-bound s 93.3 0.047 1.6E-06 43.9 3.0 38 3-40 9-52 (536)
40 2hy7_A Glucuronosyltransferase 92.9 1.1 3.7E-05 34.3 10.0 36 3-40 14-52 (406)
41 3hbm_A UDP-sugar hydrolase; PS 92.7 0.15 5E-06 37.7 4.6 91 5-134 2-99 (282)
42 3s28_A Sucrose synthase 1; gly 92.6 0.2 6.8E-06 42.5 5.8 108 22-137 318-439 (816)
43 3tov_A Glycosyl transferase fa 92.3 1.1 3.9E-05 33.6 9.3 105 2-133 7-115 (349)
44 1rzu_A Glycogen synthase 1; gl 92.1 0.17 5.8E-06 39.4 4.6 38 4-41 1-44 (485)
45 2qzs_A Glycogen synthase; glyc 92.0 0.19 6.6E-06 39.1 4.8 38 4-41 1-44 (485)
46 4hwg_A UDP-N-acetylglucosamine 91.9 1.3 4.4E-05 33.9 9.2 106 11-136 16-125 (385)
47 2wqk_A 5'-nucleotidase SURE; S 91.3 0.29 1E-05 35.5 4.7 39 4-44 2-40 (251)
48 1g5t_A COB(I)alamin adenosyltr 91.2 2.7 9.2E-05 29.2 9.9 99 3-118 28-131 (196)
49 1id1_A Putative potassium chan 90.7 0.2 6.7E-06 33.0 3.1 35 1-40 1-35 (153)
50 3qjg_A Epidermin biosynthesis 90.2 0.55 1.9E-05 32.1 5.1 41 4-45 6-46 (175)
51 2phj_A 5'-nucleotidase SURE; S 89.4 1.3 4.4E-05 32.1 6.7 40 4-45 2-41 (251)
52 2yxb_A Coenzyme B12-dependent 89.3 0.67 2.3E-05 31.1 5.0 43 3-45 18-60 (161)
53 1y80_A Predicted cobalamin bin 89.3 0.93 3.2E-05 31.6 5.8 44 3-46 88-131 (210)
54 2i2x_B MTAC, methyltransferase 88.7 1.2 4E-05 32.3 6.2 42 3-44 123-164 (258)
55 3zqu_A Probable aromatic acid 88.4 0.79 2.7E-05 32.3 4.9 43 3-46 4-46 (209)
56 1mvl_A PPC decarboxylase athal 88.1 0.9 3.1E-05 32.0 5.1 42 3-46 19-60 (209)
57 3mcu_A Dipicolinate synthase, 87.9 0.8 2.7E-05 32.2 4.7 41 2-43 4-45 (207)
58 3lqk_A Dipicolinate synthase s 87.4 1 3.5E-05 31.5 5.0 42 2-44 6-48 (201)
59 3ezx_A MMCP 1, monomethylamine 87.0 1.5 5E-05 30.9 5.7 44 3-46 92-135 (215)
60 1p3y_1 MRSD protein; flavoprot 85.1 0.76 2.6E-05 32.0 3.3 42 2-44 7-48 (194)
61 2ejb_A Probable aromatic acid 85.0 1.9 6.3E-05 29.8 5.3 43 4-47 2-44 (189)
62 2q5c_A NTRC family transcripti 85.0 3.1 0.00011 28.7 6.4 49 91-145 129-177 (196)
63 1qzu_A Hypothetical protein MD 84.9 1.2 4.2E-05 31.2 4.3 44 2-46 18-62 (206)
64 3bfv_A CAPA1, CAPB2, membrane 84.8 9.1 0.00031 27.6 11.4 40 3-42 81-122 (271)
65 1sbz_A Probable aromatic acid 84.5 1.3 4.6E-05 30.8 4.4 43 4-47 1-44 (197)
66 1g63_A Epidermin modifying enz 83.8 1.2 4.1E-05 30.6 3.8 41 4-45 3-43 (181)
67 3cio_A ETK, tyrosine-protein k 83.5 11 0.00038 27.6 10.8 38 4-41 104-143 (299)
68 2lpm_A Two-component response 82.9 1.5 5.3E-05 27.9 3.9 40 94-136 43-87 (123)
69 3qxc_A Dethiobiotin synthetase 81.5 12 0.00042 26.6 8.7 28 11-38 30-57 (242)
70 1e2b_A Enzyme IIB-cellobiose; 81.2 3.7 0.00013 25.4 5.1 40 1-40 1-40 (106)
71 3to5_A CHEY homolog; alpha(5)b 80.7 2.5 8.7E-05 27.2 4.4 32 106-137 56-96 (134)
72 3lrx_A Putative hydrogenase; a 80.2 1.9 6.3E-05 28.6 3.7 36 4-42 24-59 (158)
73 3gl9_A Response regulator; bet 79.4 4.1 0.00014 24.9 5.0 41 94-137 36-85 (122)
74 2gt1_A Lipopolysaccharide hept 79.0 2.9 9.8E-05 30.7 4.8 44 4-47 1-46 (326)
75 3kkl_A Probable chaperone prot 78.8 5.9 0.0002 28.3 6.2 42 1-42 1-53 (244)
76 3gpi_A NAD-dependent epimerase 78.7 3.4 0.00012 29.6 5.0 35 1-40 1-35 (286)
77 2yvq_A Carbamoyl-phosphate syn 77.9 6 0.0002 25.8 5.5 90 15-134 34-131 (143)
78 1bg6_A N-(1-D-carboxylethyl)-L 77.2 2 6.8E-05 32.0 3.5 35 1-40 2-36 (359)
79 4g6h_A Rotenone-insensitive NA 77.0 1.4 4.7E-05 35.0 2.6 35 2-41 41-75 (502)
80 3dqz_A Alpha-hydroxynitrIle ly 76.9 2.3 7.7E-05 29.2 3.5 40 1-40 1-40 (258)
81 3ghy_A Ketopantoate reductase 75.5 2.2 7.4E-05 31.8 3.2 35 1-40 1-35 (335)
82 3oy2_A Glycosyltransferase B73 74.6 3.7 0.00013 30.9 4.4 37 4-41 1-40 (413)
83 3vot_A L-amino acid ligase, BL 74.2 16 0.00055 27.9 8.0 36 1-41 1-38 (425)
84 2pju_A Propionate catabolism o 74.0 11 0.00038 26.6 6.4 40 91-136 141-180 (225)
85 1mio_A Nitrogenase molybdenum 74.0 23 0.0008 28.4 9.0 26 106-134 455-480 (533)
86 3t6k_A Response regulator rece 73.7 7.6 0.00026 24.1 5.2 32 106-137 47-87 (136)
87 3bul_A Methionine synthase; tr 73.3 6.8 0.00023 31.9 5.7 43 3-45 98-140 (579)
88 2r85_A PURP protein PF1517; AT 73.2 4 0.00014 29.9 4.1 34 2-41 1-34 (334)
89 1lss_A TRK system potassium up 73.0 4.3 0.00015 25.4 3.8 34 2-40 3-36 (140)
90 2ew2_A 2-dehydropantoate 2-red 72.9 2.9 0.0001 30.4 3.3 35 1-40 1-35 (316)
91 4fu0_A D-alanine--D-alanine li 72.2 2.5 8.6E-05 31.8 2.9 37 1-38 1-42 (357)
92 2r8r_A Sensor protein; KDPD, P 72.1 7.3 0.00025 27.7 5.1 39 3-41 6-44 (228)
93 3la6_A Tyrosine-protein kinase 71.9 26 0.00088 25.5 11.1 39 4-42 92-132 (286)
94 3m6m_D Sensory/regulatory prot 71.9 6 0.0002 24.9 4.4 32 106-137 57-99 (143)
95 4dzz_A Plasmid partitioning pr 71.4 20 0.00068 23.9 9.6 32 11-42 10-41 (206)
96 4gi5_A Quinone reductase; prot 71.2 9.4 0.00032 28.0 5.7 38 1-38 20-60 (280)
97 3hn2_A 2-dehydropantoate 2-red 70.2 9.1 0.00031 28.1 5.5 39 3-47 2-40 (312)
98 3f6p_A Transcriptional regulat 69.9 11 0.00036 22.8 5.1 41 94-137 36-82 (120)
99 4b4o_A Epimerase family protei 69.8 3.4 0.00012 29.8 3.1 32 4-39 1-32 (298)
100 2gk4_A Conserved hypothetical 69.4 4.5 0.00015 28.9 3.5 21 21-41 33-53 (232)
101 2g1u_A Hypothetical protein TM 68.3 7.3 0.00025 25.2 4.2 33 3-40 19-51 (155)
102 3llv_A Exopolyphosphatase-rela 68.1 3.8 0.00013 26.0 2.7 32 4-40 7-38 (141)
103 4hb9_A Similarities with proba 68.1 4.4 0.00015 30.3 3.5 29 4-37 2-30 (412)
104 1rw7_A YDR533CP; alpha-beta sa 68.0 16 0.00056 25.7 6.3 41 1-41 1-52 (243)
105 3eag_A UDP-N-acetylmuramate:L- 67.9 7.1 0.00024 29.0 4.5 34 3-40 4-37 (326)
106 3mc3_A DSRE/DSRF-like family p 67.5 11 0.00038 24.0 4.9 40 4-43 16-58 (134)
107 1hdo_A Biliverdin IX beta redu 67.3 15 0.00052 24.4 5.9 36 1-40 1-36 (206)
108 2xj4_A MIPZ; replication, cell 67.2 8.1 0.00028 27.9 4.6 41 1-41 1-43 (286)
109 3lyu_A Putative hydrogenase; t 67.1 4.3 0.00015 26.3 2.8 35 4-41 19-53 (142)
110 3dhn_A NAD-dependent epimerase 66.6 5.8 0.0002 27.1 3.6 36 1-40 1-37 (227)
111 2vrn_A Protease I, DR1199; cys 66.1 23 0.00078 23.7 6.5 40 1-41 7-46 (190)
112 3pdi_B Nitrogenase MOFE cofact 65.8 6 0.00021 31.1 3.9 26 106-134 374-399 (458)
113 1ehi_A LMDDL2, D-alanine:D-lac 65.8 7.7 0.00026 29.4 4.4 39 1-39 1-44 (377)
114 4dll_A 2-hydroxy-3-oxopropiona 64.7 11 0.00037 27.8 5.0 33 3-40 31-63 (320)
115 1pno_A NAD(P) transhydrogenase 64.6 9.2 0.00031 25.9 4.0 39 3-41 23-64 (180)
116 4huj_A Uncharacterized protein 64.5 3.5 0.00012 28.7 2.1 35 1-40 21-55 (220)
117 3zzm_A Bifunctional purine bio 64.5 37 0.0013 27.2 8.0 49 4-66 10-58 (523)
118 2bi7_A UDP-galactopyranose mut 64.1 5.8 0.0002 30.1 3.5 36 1-41 1-36 (384)
119 3kkj_A Amine oxidase, flavin-c 64.0 4.4 0.00015 27.6 2.6 18 21-38 15-32 (336)
120 1d4o_A NADP(H) transhydrogenas 64.0 9.5 0.00032 25.9 4.0 39 3-41 22-63 (184)
121 3q0i_A Methionyl-tRNA formyltr 63.5 16 0.00056 27.2 5.7 35 1-40 5-39 (318)
122 1vi6_A 30S ribosomal protein S 63.5 6.7 0.00023 27.5 3.3 30 107-136 115-146 (208)
123 3fwz_A Inner membrane protein 63.3 5.1 0.00017 25.6 2.6 34 3-41 7-40 (140)
124 3gt7_A Sensor protein; structu 63.1 16 0.00053 23.2 5.1 40 94-136 41-89 (154)
125 2pn1_A Carbamoylphosphate synt 62.9 14 0.00047 27.0 5.3 35 1-41 2-38 (331)
126 2bw0_A 10-FTHFDH, 10-formyltet 62.7 14 0.00049 27.6 5.3 34 1-39 20-53 (329)
127 2fsv_C NAD(P) transhydrogenase 62.7 10 0.00034 26.3 4.0 39 3-41 46-87 (203)
128 4e12_A Diketoreductase; oxidor 62.6 7.6 0.00026 28.1 3.7 35 1-40 2-36 (283)
129 3i83_A 2-dehydropantoate 2-red 62.5 7.3 0.00025 28.7 3.7 39 3-47 2-40 (320)
130 1dbw_A Transcriptional regulat 62.4 19 0.00066 21.6 5.2 41 94-137 37-84 (126)
131 1jx7_A Hypothetical protein YC 62.2 9.6 0.00033 23.3 3.7 29 15-43 16-46 (117)
132 3c3m_A Response regulator rece 62.1 17 0.00058 22.4 5.0 32 106-137 46-86 (138)
133 1p9o_A Phosphopantothenoylcyst 62.1 6.2 0.00021 29.5 3.2 22 21-42 69-90 (313)
134 3grc_A Sensor protein, kinase; 62.0 21 0.00071 21.9 5.4 42 94-138 40-90 (140)
135 1iow_A DD-ligase, DDLB, D-ALA\ 62.0 21 0.00071 25.6 6.0 40 2-41 1-44 (306)
136 3bch_A 40S ribosomal protein S 61.8 7.3 0.00025 28.2 3.4 29 107-135 151-181 (253)
137 1dhr_A Dihydropteridine reduct 61.8 12 0.00042 26.0 4.7 35 3-40 6-40 (241)
138 1djl_A Transhydrogenase DIII; 61.7 11 0.00036 26.2 4.0 39 3-41 45-86 (207)
139 4e3z_A Putative oxidoreductase 61.3 18 0.00061 25.6 5.5 37 1-40 23-59 (272)
140 4gbj_A 6-phosphogluconate dehy 61.2 10 0.00035 27.8 4.2 30 4-38 6-35 (297)
141 2a5l_A Trp repressor binding p 61.1 17 0.00057 24.4 5.1 41 1-41 3-44 (200)
142 3oid_A Enoyl-[acyl-carrier-pro 61.1 13 0.00045 26.3 4.7 37 1-40 1-37 (258)
143 4e21_A 6-phosphogluconate dehy 60.9 7.3 0.00025 29.5 3.5 35 1-40 20-54 (358)
144 3sju_A Keto reductase; short-c 60.9 12 0.00042 26.8 4.6 37 1-40 21-57 (279)
145 3p9x_A Phosphoribosylglycinami 60.7 16 0.00054 25.6 4.9 46 92-137 15-61 (211)
146 3kjh_A CO dehydrogenase/acetyl 60.3 7.2 0.00025 27.0 3.2 38 4-41 1-38 (254)
147 3hh1_A Tetrapyrrole methylase 60.2 8.8 0.0003 23.9 3.3 17 22-38 70-86 (117)
148 3f67_A Putative dienelactone h 60.1 19 0.00064 24.2 5.3 35 5-39 33-67 (241)
149 1e4e_A Vancomycin/teicoplanin 59.9 7.7 0.00026 28.8 3.4 38 1-39 1-43 (343)
150 2z1m_A GDP-D-mannose dehydrata 59.6 10 0.00035 27.6 4.1 36 1-40 1-36 (345)
151 3enk_A UDP-glucose 4-epimerase 59.6 13 0.00046 27.0 4.7 36 1-39 2-37 (341)
152 2rjn_A Response regulator rece 59.6 20 0.00069 22.5 5.1 42 94-138 41-89 (154)
153 3hv2_A Response regulator/HD d 59.1 20 0.00069 22.5 5.0 42 93-137 47-95 (153)
154 3hyw_A Sulfide-quinone reducta 58.6 6.6 0.00023 30.2 2.9 36 1-42 1-38 (430)
155 2i87_A D-alanine-D-alanine lig 58.4 6.1 0.00021 29.7 2.6 38 1-39 1-43 (364)
156 3trh_A Phosphoribosylaminoimid 58.2 24 0.00083 23.8 5.2 44 1-45 4-49 (169)
157 2vo1_A CTP synthase 1; pyrimid 58.2 17 0.00059 26.7 4.8 43 1-43 20-65 (295)
158 3nhm_A Response regulator; pro 58.1 25 0.00085 21.2 5.2 32 106-137 46-86 (133)
159 2vqe_B 30S ribosomal protein S 58.1 2 6.7E-05 31.2 -0.2 32 106-137 157-190 (256)
160 3dkr_A Esterase D; alpha beta 58.1 14 0.00049 24.7 4.4 37 4-40 22-58 (251)
161 2qxy_A Response regulator; reg 58.1 20 0.0007 22.0 4.9 40 94-137 38-84 (142)
162 2bru_C NAD(P) transhydrogenase 58.1 10 0.00035 25.8 3.3 39 3-41 30-71 (186)
163 1gsa_A Glutathione synthetase; 57.7 14 0.00046 26.6 4.4 37 4-40 2-41 (316)
164 3obb_A Probable 3-hydroxyisobu 57.5 15 0.00052 26.9 4.6 31 4-39 4-34 (300)
165 1zi8_A Carboxymethylenebutenol 57.4 23 0.00077 23.7 5.3 34 6-39 30-63 (236)
166 1pq4_A Periplasmic binding pro 57.4 16 0.00056 26.6 4.8 50 91-143 224-275 (291)
167 3cu5_A Two component transcrip 57.3 25 0.00086 21.7 5.2 31 106-136 48-85 (141)
168 4ds3_A Phosphoribosylglycinami 57.2 18 0.00062 25.2 4.7 45 92-136 20-65 (209)
169 2ixd_A LMBE-related protein; h 57.2 13 0.00045 26.4 4.1 37 1-38 1-38 (242)
170 1kjn_A MTH0777; hypotethical p 57.2 8.8 0.0003 25.5 2.9 33 15-47 20-52 (157)
171 3sbx_A Putative uncharacterize 57.1 24 0.00082 24.2 5.3 33 3-36 13-49 (189)
172 3bbn_B Ribosomal protein S2; s 57.1 8 0.00028 27.6 2.9 30 107-136 157-188 (231)
173 2iz1_A 6-phosphogluconate dehy 57.1 7.2 0.00024 30.7 2.9 34 1-39 3-36 (474)
174 4e7p_A Response regulator; DNA 57.0 24 0.00082 22.0 5.1 42 93-137 55-103 (150)
175 3cg0_A Response regulator rece 56.8 18 0.0006 22.2 4.4 42 94-138 44-92 (140)
176 2qr3_A Two-component system re 56.8 23 0.00079 21.6 4.9 33 106-138 46-90 (140)
177 3tqr_A Phosphoribosylglycinami 56.7 19 0.00064 25.3 4.8 45 92-136 18-62 (215)
178 1u7z_A Coenzyme A biosynthesis 56.6 11 0.00039 26.6 3.6 20 21-40 38-57 (226)
179 2hmt_A YUAA protein; RCK, KTN, 56.0 8 0.00027 24.2 2.6 32 4-40 7-38 (144)
180 2zkq_b 40S ribosomal protein S 55.9 10 0.00034 28.1 3.3 30 107-136 118-149 (295)
181 3b2n_A Uncharacterized protein 55.9 19 0.00066 21.9 4.4 32 106-137 48-86 (133)
182 3o26_A Salutaridine reductase; 55.8 18 0.00062 25.8 4.8 35 3-40 11-45 (311)
183 3a10_A Response regulator; pho 55.7 29 0.00098 20.3 5.5 32 106-137 44-82 (116)
184 1tmy_A CHEY protein, TMY; chem 55.6 22 0.00074 21.0 4.5 32 106-137 46-84 (120)
185 4fbl_A LIPS lipolytic enzyme; 55.5 11 0.00038 26.7 3.5 32 7-38 54-85 (281)
186 2x5n_A SPRPN10, 26S proteasome 55.5 26 0.00091 23.8 5.3 34 6-39 110-143 (192)
187 2rdm_A Response regulator rece 55.5 29 0.00098 20.8 5.2 41 94-137 39-88 (132)
188 3alj_A 2-methyl-3-hydroxypyrid 55.4 10 0.00035 28.3 3.5 34 1-39 9-42 (379)
189 4g65_A TRK system potassium up 55.2 3.5 0.00012 32.4 0.8 35 2-41 2-36 (461)
190 1xhf_A DYE resistance, aerobic 55.2 29 0.001 20.5 5.2 32 106-137 46-83 (123)
191 3eod_A Protein HNR; response r 55.2 23 0.00079 21.3 4.7 42 93-137 40-88 (130)
192 3kht_A Response regulator; PSI 55.2 31 0.0011 21.2 5.4 42 93-137 40-90 (144)
193 4f0j_A Probable hydrolytic enz 55.1 19 0.00064 25.1 4.7 35 6-40 48-82 (315)
194 1p6q_A CHEY2; chemotaxis, sign 55.0 28 0.00096 20.8 5.0 41 94-137 41-90 (129)
195 1byr_A Protein (endonuclease); 54.7 33 0.0011 21.8 5.6 38 3-42 27-64 (155)
196 1b93_A Protein (methylglyoxal 54.6 36 0.0012 22.5 5.6 90 14-136 20-121 (152)
197 2qs7_A Uncharacterized protein 54.6 20 0.00068 23.2 4.4 40 5-44 9-49 (144)
198 3osu_A 3-oxoacyl-[acyl-carrier 54.3 30 0.001 24.0 5.7 37 1-40 1-37 (246)
199 3hwr_A 2-dehydropantoate 2-red 54.3 11 0.00036 27.8 3.3 30 3-37 19-48 (318)
200 1zgz_A Torcad operon transcrip 54.3 29 0.00098 20.5 5.0 32 106-137 45-82 (122)
201 2etv_A Iron(III) ABC transport 54.1 17 0.00057 27.1 4.4 38 92-136 88-126 (346)
202 2vsy_A XCC0866; transferase, g 54.1 20 0.00069 28.2 5.1 38 3-40 205-246 (568)
203 1ks9_A KPA reductase;, 2-dehyd 54.1 13 0.00043 26.5 3.7 31 5-40 2-32 (291)
204 4eg0_A D-alanine--D-alanine li 54.1 32 0.0011 25.0 5.9 39 3-42 13-56 (317)
205 3j20_B 30S ribosomal protein S 54.0 11 0.00036 26.4 3.0 29 107-135 111-141 (202)
206 4dim_A Phosphoribosylglycinami 53.9 18 0.00061 27.3 4.6 36 1-41 5-40 (403)
207 1srr_A SPO0F, sporulation resp 53.8 21 0.00071 21.3 4.3 32 106-137 46-84 (124)
208 3qha_A Putative oxidoreductase 53.8 11 0.00039 27.3 3.4 33 3-40 15-47 (296)
209 3lte_A Response regulator; str 53.7 30 0.001 20.8 5.0 41 94-137 40-88 (132)
210 3k96_A Glycerol-3-phosphate de 53.6 9.3 0.00032 28.9 2.9 33 3-40 29-61 (356)
211 1z82_A Glycerol-3-phosphate de 53.6 11 0.00038 27.9 3.3 33 3-40 14-46 (335)
212 2a9o_A Response regulator; ess 53.4 25 0.00086 20.7 4.6 33 106-138 44-82 (120)
213 1meo_A Phosophoribosylglycinam 53.1 26 0.0009 24.3 5.0 45 92-136 13-58 (209)
214 3icc_A Putative 3-oxoacyl-(acy 52.8 35 0.0012 23.6 5.8 36 3-41 6-41 (255)
215 1qyd_A Pinoresinol-lariciresin 52.8 15 0.00052 26.3 4.0 36 1-40 1-37 (313)
216 3ty2_A 5'-nucleotidase SURE; s 52.7 29 0.00099 25.2 5.3 41 3-45 11-51 (261)
217 3crn_A Response regulator rece 52.7 29 0.00099 21.1 4.9 32 106-137 46-84 (132)
218 3gi1_A LBP, laminin-binding pr 52.6 27 0.00093 25.4 5.3 42 92-136 216-259 (286)
219 3doj_A AT3G25530, dehydrogenas 52.6 14 0.00049 27.0 3.8 33 3-40 21-53 (310)
220 2qzj_A Two-component response 52.4 22 0.00074 21.9 4.2 32 106-137 47-84 (136)
221 3pfb_A Cinnamoyl esterase; alp 52.4 29 0.00099 23.6 5.3 35 6-40 48-84 (270)
222 1evy_A Glycerol-3-phosphate de 52.4 6.1 0.00021 29.6 1.8 31 5-40 17-47 (366)
223 1xrs_B D-lysine 5,6-aminomutas 52.3 13 0.00043 27.0 3.3 44 3-46 120-172 (262)
224 3gg2_A Sugar dehydrogenase, UD 52.3 12 0.00042 29.2 3.5 32 4-40 3-34 (450)
225 2xzm_B RPS0E; ribosome, transl 52.3 8.9 0.0003 27.5 2.5 31 106-136 113-145 (241)
226 4as2_A Phosphorylcholine phosp 52.3 14 0.00047 27.6 3.7 25 17-41 145-169 (327)
227 3qua_A Putative uncharacterize 52.2 34 0.0012 23.6 5.4 33 3-36 22-58 (199)
228 2pl1_A Transcriptional regulat 52.1 34 0.0012 20.1 5.2 32 106-137 43-81 (121)
229 1qyc_A Phenylcoumaran benzylic 52.1 16 0.00055 26.1 4.0 36 1-40 1-37 (308)
230 3ew7_A LMO0794 protein; Q8Y8U8 51.9 13 0.00043 25.1 3.3 32 5-40 2-33 (221)
231 2dpo_A L-gulonate 3-dehydrogen 51.9 10 0.00035 28.2 2.9 35 1-40 4-38 (319)
232 3c6x_A Hydroxynitrilase; atomi 51.8 18 0.00061 25.1 4.1 39 1-40 1-39 (257)
233 3iwa_A FAD-dependent pyridine 51.7 12 0.0004 29.1 3.3 36 1-41 1-38 (472)
234 4a9w_A Monooxygenase; baeyer-v 51.7 7.1 0.00024 28.4 2.0 35 1-40 1-35 (357)
235 1tvm_A PTS system, galactitol- 51.5 25 0.00087 21.7 4.3 36 3-38 21-57 (113)
236 2vou_A 2,6-dihydroxypyridine h 51.5 15 0.0005 27.7 3.8 33 2-39 4-36 (397)
237 3qit_A CURM TE, polyketide syn 51.5 24 0.00081 24.0 4.7 35 6-40 28-62 (286)
238 1mio_B Nitrogenase molybdenum 51.4 21 0.00073 27.8 4.8 26 106-134 384-409 (458)
239 3e8x_A Putative NAD-dependent 51.4 13 0.00044 25.6 3.3 35 3-41 21-55 (236)
240 3ego_A Probable 2-dehydropanto 51.2 9.6 0.00033 28.0 2.6 33 3-41 2-34 (307)
241 1imj_A CIB, CCG1-interacting f 51.1 41 0.0014 21.9 5.7 38 5-42 33-72 (210)
242 2raf_A Putative dinucleotide-b 51.1 16 0.00054 25.1 3.6 32 3-39 19-50 (209)
243 3rqi_A Response regulator prot 51.1 18 0.00061 23.8 3.8 42 93-137 40-88 (184)
244 3f5d_A Protein YDEA; unknow pr 51.0 21 0.00072 24.5 4.3 41 1-42 1-42 (206)
245 3pdi_A Nitrogenase MOFE cofact 51.0 16 0.00054 28.9 4.0 27 106-135 400-426 (483)
246 2wtm_A EST1E; hydrolase; 1.60A 51.0 32 0.0011 23.5 5.3 33 6-38 29-63 (251)
247 3c85_A Putative glutathione-re 50.9 11 0.00039 24.9 2.8 34 3-41 39-73 (183)
248 3dme_A Conserved exported prot 50.8 10 0.00035 27.7 2.8 33 3-40 4-36 (369)
249 2l2q_A PTS system, cellobiose- 50.8 20 0.00067 22.0 3.7 35 4-38 5-39 (109)
250 1mb3_A Cell division response 50.7 24 0.00081 21.0 4.1 32 106-137 44-84 (124)
251 3i6i_A Putative leucoanthocyan 50.5 24 0.00081 25.9 4.8 37 1-41 8-44 (346)
252 3dtt_A NADP oxidoreductase; st 50.4 16 0.00055 25.7 3.7 33 3-40 19-51 (245)
253 3l77_A Short-chain alcohol deh 50.4 27 0.00091 24.0 4.8 34 4-40 2-35 (235)
254 1f0y_A HCDH, L-3-hydroxyacyl-C 50.3 12 0.00042 27.1 3.1 32 4-40 16-47 (302)
255 2ehd_A Oxidoreductase, oxidore 50.3 18 0.00063 24.8 3.9 37 1-40 1-38 (234)
256 2rcy_A Pyrroline carboxylate r 50.2 6.5 0.00022 27.8 1.6 34 1-39 2-39 (262)
257 1jbe_A Chemotaxis protein CHEY 50.2 38 0.0013 20.2 5.1 41 94-137 39-88 (128)
258 3cz5_A Two-component response 50.1 41 0.0014 20.9 5.4 32 106-137 50-88 (153)
259 2ywr_A Phosphoribosylglycinami 50.1 33 0.0011 23.9 5.2 45 92-137 14-60 (216)
260 2jk1_A HUPR, hydrogenase trans 50.1 32 0.0011 21.0 4.8 32 106-137 43-81 (139)
261 4dgk_A Phytoene dehydrogenase; 50.1 7.8 0.00027 30.1 2.1 30 4-38 2-31 (501)
262 3dfu_A Uncharacterized protein 50.1 15 0.00051 26.1 3.4 34 2-40 5-38 (232)
263 3pe6_A Monoglyceride lipase; a 49.9 25 0.00087 24.1 4.7 36 5-40 43-78 (303)
264 1rcu_A Conserved hypothetical 49.8 34 0.0012 23.5 5.1 34 3-36 23-63 (195)
265 3r8n_B 30S ribosomal protein S 49.7 8.2 0.00028 27.2 1.9 31 107-137 149-181 (218)
266 3h2s_A Putative NADH-flavin re 49.6 14 0.0005 25.0 3.3 27 12-40 7-33 (224)
267 1yio_A Response regulatory pro 49.3 25 0.00086 23.4 4.4 32 106-137 47-85 (208)
268 1u0t_A Inorganic polyphosphate 49.0 22 0.00074 26.1 4.3 40 1-40 1-42 (307)
269 3ged_A Short-chain dehydrogena 49.0 25 0.00086 25.0 4.5 33 5-40 3-35 (247)
270 3lk7_A UDP-N-acetylmuramoylala 48.7 26 0.0009 27.2 4.9 32 3-39 9-40 (451)
271 3n7t_A Macrophage binding prot 48.6 63 0.0022 22.9 6.6 38 4-41 10-58 (247)
272 2zyd_A 6-phosphogluconate dehy 48.4 10 0.00034 30.0 2.5 35 1-40 13-47 (480)
273 2xci_A KDO-transferase, 3-deox 48.3 82 0.0028 23.4 7.9 35 4-40 41-75 (374)
274 3tfo_A Putative 3-oxoacyl-(acy 48.2 35 0.0012 24.2 5.2 37 1-40 1-37 (264)
275 3oz2_A Digeranylgeranylglycero 48.2 7.2 0.00024 28.9 1.6 33 1-38 2-34 (397)
276 3av3_A Phosphoribosylglycinami 48.1 33 0.0011 23.8 4.9 45 93-137 17-62 (212)
277 3q9s_A DNA-binding response re 48.1 33 0.0011 23.9 5.0 43 93-138 70-118 (249)
278 3cky_A 2-hydroxymethyl glutara 48.1 27 0.00093 25.1 4.7 32 3-39 4-35 (301)
279 4e5v_A Putative THUA-like prot 47.9 33 0.0011 25.0 5.0 38 2-40 3-43 (281)
280 3u5c_A 40S ribosomal protein S 47.9 15 0.0005 26.6 3.0 29 107-135 117-147 (252)
281 3cfy_A Putative LUXO repressor 47.8 29 0.00098 21.3 4.3 32 106-137 47-85 (137)
282 3g0o_A 3-hydroxyisobutyrate de 47.8 13 0.00043 27.1 2.8 33 3-40 7-39 (303)
283 3sty_A Methylketone synthase 1 47.7 29 0.001 23.5 4.7 36 4-40 13-48 (267)
284 1ff9_A Saccharopine reductase; 47.7 27 0.00093 27.2 4.8 35 1-40 1-35 (450)
285 2b69_A UDP-glucuronate decarbo 47.6 24 0.00081 25.8 4.3 34 2-39 26-59 (343)
286 3u7q_A Nitrogenase molybdenum- 47.6 16 0.00055 29.0 3.5 26 106-134 416-441 (492)
287 4ao6_A Esterase; hydrolase, th 47.6 26 0.00087 24.5 4.4 37 5-41 57-95 (259)
288 3kd9_A Coenzyme A disulfide re 47.6 13 0.00043 28.7 2.9 36 1-41 1-38 (449)
289 2hy5_A Putative sulfurtransfer 47.4 18 0.00061 22.8 3.2 27 16-42 16-43 (130)
290 2pzm_A Putative nucleotide sug 47.2 22 0.00076 25.9 4.1 33 3-39 20-52 (330)
291 3slg_A PBGP3 protein; structur 47.1 19 0.00065 26.6 3.8 37 1-41 22-59 (372)
292 3rm3_A MGLP, thermostable mono 47.1 26 0.00088 24.0 4.3 36 5-40 41-76 (270)
293 1y56_B Sarcosine oxidase; dehy 47.1 13 0.00046 27.5 2.9 33 3-40 5-37 (382)
294 1jkx_A GART;, phosphoribosylgl 47.0 41 0.0014 23.4 5.2 45 92-136 13-58 (212)
295 1y1p_A ARII, aldehyde reductas 46.9 28 0.00095 25.2 4.6 34 3-40 11-44 (342)
296 3c97_A Signal transduction his 46.8 47 0.0016 20.2 5.3 21 106-126 53-75 (140)
297 3md9_A Hemin-binding periplasm 46.8 25 0.00084 24.6 4.2 30 106-135 58-89 (255)
298 3kcq_A Phosphoribosylglycinami 46.6 26 0.00088 24.5 4.1 45 92-136 21-66 (215)
299 3eul_A Possible nitrate/nitrit 46.6 30 0.001 21.6 4.3 42 93-137 50-98 (152)
300 2ab0_A YAJL; DJ-1/THIJ superfa 46.6 62 0.0021 21.9 6.1 39 3-42 2-40 (205)
301 3hdg_A Uncharacterized protein 46.6 31 0.0011 20.9 4.3 32 106-137 50-88 (137)
302 1jzt_A Hypothetical 27.5 kDa p 46.3 15 0.0005 26.3 2.9 34 4-40 59-94 (246)
303 3i12_A D-alanine-D-alanine lig 46.3 16 0.00055 27.4 3.3 40 1-40 1-44 (364)
304 2xdo_A TETX2 protein; tetracyc 46.3 18 0.00062 27.2 3.6 32 3-39 26-57 (398)
305 2d1p_B TUSC, hypothetical UPF0 46.2 41 0.0014 20.8 4.7 35 8-42 7-43 (119)
306 2rk3_A Protein DJ-1; parkinson 46.2 64 0.0022 21.6 6.3 40 1-41 1-40 (197)
307 1kgs_A DRRD, DNA binding respo 46.2 39 0.0013 22.7 5.1 33 106-138 45-84 (225)
308 1byi_A Dethiobiotin synthase; 46.1 66 0.0022 21.7 6.3 32 6-37 4-36 (224)
309 3hzh_A Chemotaxis response reg 46.0 32 0.0011 21.7 4.4 44 93-137 70-120 (157)
310 3h1g_A Chemotaxis protein CHEY 46.0 47 0.0016 19.9 5.4 32 106-137 50-90 (129)
311 3auf_A Glycinamide ribonucleot 46.0 32 0.0011 24.2 4.6 31 107-137 51-81 (229)
312 4gwg_A 6-phosphogluconate dehy 45.9 13 0.00045 29.4 2.8 35 1-40 2-36 (484)
313 3d1c_A Flavin-containing putat 45.9 12 0.00043 27.5 2.6 36 1-41 2-38 (369)
314 4hn9_A Iron complex transport 45.8 17 0.0006 26.8 3.4 32 106-137 115-146 (335)
315 4ezb_A Uncharacterized conserv 45.8 18 0.00062 26.6 3.4 32 4-40 25-57 (317)
316 2nwq_A Probable short-chain de 45.8 31 0.001 24.6 4.6 33 5-40 22-54 (272)
317 3ppi_A 3-hydroxyacyl-COA dehyd 45.7 38 0.0013 24.0 5.1 33 4-39 30-62 (281)
318 1qkk_A DCTD, C4-dicarboxylate 45.6 29 0.00098 21.8 4.1 33 106-138 46-85 (155)
319 3kwp_A Predicted methyltransfe 45.4 34 0.0012 25.1 4.8 41 3-43 88-129 (296)
320 2gkg_A Response regulator homo 45.3 34 0.0012 20.2 4.3 29 106-134 48-86 (127)
321 3qsg_A NAD-binding phosphogluc 45.3 13 0.00046 27.2 2.6 33 3-40 24-57 (312)
322 2zki_A 199AA long hypothetical 45.2 32 0.0011 23.0 4.4 38 3-41 4-42 (199)
323 2q7x_A UPF0052 protein SP_1565 45.2 50 0.0017 24.7 5.7 36 1-41 2-37 (326)
324 1wek_A Hypothetical protein TT 45.2 29 0.00099 24.3 4.2 33 4-36 38-74 (217)
325 1ys7_A Transcriptional regulat 44.9 41 0.0014 22.7 5.0 31 106-136 50-87 (233)
326 2w36_A Endonuclease V; hypoxan 44.7 24 0.00084 24.9 3.8 31 106-136 102-139 (225)
327 2fx5_A Lipase; alpha-beta hydr 44.7 24 0.00083 24.4 3.9 36 5-40 50-85 (258)
328 3eq2_A Probable two-component 44.7 31 0.0011 25.9 4.7 41 94-137 39-86 (394)
329 3dm5_A SRP54, signal recogniti 44.6 35 0.0012 26.7 4.9 40 5-44 102-141 (443)
330 3iz6_A 40S ribosomal protein S 44.6 19 0.00065 26.7 3.2 30 107-136 122-153 (305)
331 2qjw_A Uncharacterized protein 44.5 43 0.0015 21.1 4.9 36 1-37 2-39 (176)
332 3d3k_A Enhancer of mRNA-decapp 44.5 17 0.00059 26.2 3.0 34 4-40 86-121 (259)
333 1ep3_B Dihydroorotate dehydrog 44.3 24 0.00081 25.0 3.8 36 4-41 111-146 (262)
334 2ts1_A Tyrosyl-tRNA synthetase 44.3 22 0.00076 27.6 3.8 33 7-40 36-71 (419)
335 2j48_A Two-component sensor ki 44.2 39 0.0013 19.4 4.4 32 106-137 44-84 (119)
336 1eg2_A Modification methylase 44.2 30 0.001 25.6 4.4 32 107-138 241-274 (319)
337 2o8n_A APOA-I binding protein; 44.1 20 0.00069 26.0 3.3 34 4-40 80-115 (265)
338 2h78_A Hibadh, 3-hydroxyisobut 44.1 25 0.00087 25.3 4.0 32 4-40 4-35 (302)
339 4h15_A Short chain alcohol deh 44.1 40 0.0014 24.1 5.0 34 3-39 10-43 (261)
340 2fuk_A XC6422 protein; A/B hyd 44.1 56 0.0019 21.4 5.6 27 13-39 51-77 (220)
341 3ucx_A Short chain dehydrogena 44.0 45 0.0016 23.4 5.3 33 4-39 11-43 (264)
342 3i42_A Response regulator rece 43.9 47 0.0016 19.7 4.8 36 1-40 1-36 (127)
343 3n0r_A Response regulator; sig 43.6 41 0.0014 24.2 5.0 41 94-137 195-242 (286)
344 3imf_A Short chain dehydrogena 43.6 41 0.0014 23.5 5.0 34 4-40 6-39 (257)
345 3pef_A 6-phosphogluconate dehy 43.6 23 0.00079 25.4 3.7 32 4-40 2-33 (287)
346 1y42_X Tyrosyl-tRNA synthetase 43.5 18 0.0006 27.9 3.1 33 7-40 70-105 (392)
347 2wm3_A NMRA-like family domain 43.4 26 0.00088 25.0 3.9 34 4-41 6-40 (299)
348 3g17_A Similar to 2-dehydropan 43.4 6.6 0.00023 28.6 0.7 33 3-40 2-34 (294)
349 1txg_A Glycerol-3-phosphate de 43.2 15 0.00053 26.8 2.7 30 5-39 2-31 (335)
350 3e5n_A D-alanine-D-alanine lig 43.2 19 0.00065 27.4 3.3 40 1-40 20-63 (386)
351 3h7a_A Short chain dehydrogena 43.2 41 0.0014 23.5 4.9 34 4-40 7-40 (252)
352 3ka7_A Oxidoreductase; structu 43.1 18 0.00062 27.3 3.1 30 5-39 2-31 (425)
353 2g36_A Tryptophanyl-tRNA synth 43.1 12 0.00042 28.2 2.1 33 8-40 19-53 (340)
354 3da8_A Probable 5'-phosphoribo 43.1 29 0.00098 24.3 3.9 28 107-135 40-67 (215)
355 3g79_A NDP-N-acetyl-D-galactos 43.0 35 0.0012 26.9 4.8 35 3-42 18-54 (478)
356 2o1e_A YCDH; alpha-beta protei 43.0 32 0.0011 25.4 4.4 43 92-137 227-271 (312)
357 1weh_A Conserved hypothetical 42.9 35 0.0012 22.8 4.3 32 5-36 3-38 (171)
358 1boo_A Protein (N-4 cytosine-s 42.9 66 0.0023 23.6 6.2 36 107-142 251-288 (323)
359 3cx3_A Lipoprotein; zinc-bindi 42.9 31 0.0011 25.0 4.3 43 91-136 213-257 (284)
360 3cgv_A Geranylgeranyl reductas 42.7 9.8 0.00033 28.3 1.6 35 1-40 2-36 (397)
361 1jay_A Coenzyme F420H2:NADP+ o 42.7 23 0.00077 24.0 3.4 32 5-40 2-33 (212)
362 1byi_A Dethiobiotin synthase; 42.7 33 0.0011 23.2 4.2 44 91-138 96-148 (224)
363 3r0j_A Possible two component 42.6 36 0.0012 23.5 4.5 42 94-138 57-105 (250)
364 4dlp_A Aminoacyl-tRNA syntheta 42.4 32 0.0011 27.4 4.6 27 15-41 43-72 (536)
365 3n53_A Response regulator rece 42.3 25 0.00084 21.6 3.3 32 106-137 45-85 (140)
366 1g60_A Adenine-specific methyl 42.3 36 0.0012 24.1 4.5 36 107-142 211-248 (260)
367 2zbw_A Thioredoxin reductase; 42.3 16 0.00053 26.5 2.6 33 3-40 5-37 (335)
368 3vis_A Esterase; alpha/beta-hy 42.3 40 0.0014 24.1 4.8 35 6-40 98-132 (306)
369 4gxt_A A conserved functionall 42.2 23 0.00079 27.0 3.6 25 17-41 223-247 (385)
370 2xdq_B Light-independent proto 42.1 23 0.00078 28.1 3.7 25 107-134 372-396 (511)
371 3d3j_A Enhancer of mRNA-decapp 42.0 20 0.00068 26.6 3.1 34 4-40 133-168 (306)
372 1xfi_A Unknown protein; struct 42.0 27 0.00091 26.6 3.9 37 4-40 213-250 (367)
373 3trd_A Alpha/beta hydrolase; c 42.0 68 0.0023 20.8 5.7 27 13-39 45-71 (208)
374 1mv8_A GMD, GDP-mannose 6-dehy 42.0 33 0.0011 26.4 4.5 29 4-37 1-29 (436)
375 1x1t_A D(-)-3-hydroxybutyrate 41.9 47 0.0016 23.2 5.0 34 3-39 3-36 (260)
376 3aek_B Light-independent proto 41.9 23 0.00079 28.3 3.7 26 106-134 348-373 (525)
377 3mm4_A Histidine kinase homolo 41.9 28 0.00095 23.5 3.7 32 107-138 119-161 (206)
378 2d1p_A TUSD, hypothetical UPF0 41.8 65 0.0022 20.7 5.3 38 4-41 13-54 (140)
379 3s55_A Putative short-chain de 41.8 42 0.0014 23.8 4.8 33 4-39 10-42 (281)
380 2r7a_A Bacterial heme binding 41.8 33 0.0011 24.0 4.2 30 106-135 58-89 (256)
381 3pnx_A Putative sulfurtransfer 41.7 63 0.0021 21.4 5.3 46 1-46 2-48 (160)
382 3u7q_B Nitrogenase molybdenum- 41.7 37 0.0013 27.1 4.8 26 106-134 437-469 (523)
383 2qcu_A Aerobic glycerol-3-phos 41.6 16 0.00054 28.7 2.6 35 1-40 1-35 (501)
384 3kto_A Response regulator rece 41.6 16 0.00056 22.4 2.3 31 106-136 49-88 (136)
385 1i3c_A Response regulator RCP1 41.5 40 0.0014 20.9 4.3 31 107-137 61-100 (149)
386 1a04_A Nitrate/nitrite respons 41.5 36 0.0012 22.7 4.3 32 106-137 50-88 (215)
387 2a33_A Hypothetical protein; s 41.4 52 0.0018 23.0 5.0 33 4-36 14-50 (215)
388 1js1_X Transcarbamylase; alpha 41.4 40 0.0014 25.3 4.6 39 5-43 170-208 (324)
389 3gk3_A Acetoacetyl-COA reducta 41.3 43 0.0015 23.6 4.8 35 3-40 24-58 (269)
390 4eso_A Putative oxidoreductase 41.3 44 0.0015 23.4 4.8 34 4-40 8-41 (255)
391 3axb_A Putative oxidoreductase 41.3 9.1 0.00031 29.3 1.2 34 1-39 21-55 (448)
392 1wma_A Carbonyl reductase [NAD 41.2 48 0.0017 23.0 5.0 35 3-40 3-38 (276)
393 3nrn_A Uncharacterized protein 41.2 22 0.00074 26.9 3.3 30 5-39 2-31 (421)
394 3lzw_A Ferredoxin--NADP reduct 41.2 11 0.00037 27.2 1.6 33 4-41 8-40 (332)
395 3v2h_A D-beta-hydroxybutyrate 41.2 40 0.0014 24.1 4.6 33 4-39 25-57 (281)
396 3pxx_A Carveol dehydrogenase; 41.2 40 0.0014 23.8 4.6 33 4-39 10-42 (287)
397 1vpd_A Tartronate semialdehyde 40.9 38 0.0013 24.2 4.5 31 4-39 6-36 (299)
398 3fgn_A Dethiobiotin synthetase 40.9 63 0.0022 23.0 5.6 44 93-137 113-166 (251)
399 3qvl_A Putative hydantoin race 40.9 93 0.0032 22.0 7.5 29 106-134 68-97 (245)
400 3f6c_A Positive transcription 40.8 27 0.00093 21.1 3.3 31 106-136 45-82 (134)
401 3hju_A Monoglyceride lipase; a 40.8 38 0.0013 24.1 4.5 35 6-40 62-96 (342)
402 1yb4_A Tartronic semialdehyde 40.8 26 0.00089 25.0 3.6 31 3-38 3-33 (295)
403 3dqp_A Oxidoreductase YLBE; al 40.8 19 0.00065 24.4 2.7 20 21-40 14-33 (219)
404 3e61_A Putative transcriptiona 40.7 30 0.001 24.1 3.8 32 106-137 63-95 (277)
405 3r5x_A D-alanine--D-alanine li 40.6 31 0.0011 24.8 4.0 45 2-46 2-50 (307)
406 2oqr_A Sensory transduction pr 40.5 40 0.0014 22.7 4.4 34 106-139 47-86 (230)
407 3d59_A Platelet-activating fac 40.5 31 0.001 25.7 4.0 37 5-41 99-135 (383)
408 2rir_A Dipicolinate synthase, 40.4 56 0.0019 23.6 5.3 33 1-38 5-37 (300)
409 3f8d_A Thioredoxin reductase ( 40.4 17 0.00059 25.9 2.6 31 4-39 16-46 (323)
410 3of5_A Dethiobiotin synthetase 40.3 46 0.0016 23.2 4.7 36 3-38 3-40 (228)
411 3f6r_A Flavodoxin; FMN binding 40.3 58 0.002 20.4 4.9 39 4-42 2-41 (148)
412 2dkn_A 3-alpha-hydroxysteroid 40.3 24 0.00083 24.3 3.3 20 21-40 15-34 (255)
413 2uyy_A N-PAC protein; long-cha 40.2 22 0.00075 25.9 3.1 33 3-40 30-62 (316)
414 3rot_A ABC sugar transporter, 40.2 70 0.0024 22.5 5.8 31 106-136 60-94 (297)
415 4iin_A 3-ketoacyl-acyl carrier 40.2 49 0.0017 23.3 5.0 34 4-40 29-62 (271)
416 1d7o_A Enoyl-[acyl-carrier pro 40.2 52 0.0018 23.5 5.1 32 4-38 8-41 (297)
417 3pdi_B Nitrogenase MOFE cofact 40.2 38 0.0013 26.5 4.6 37 106-142 237-274 (458)
418 1e6u_A GDP-fucose synthetase; 40.0 20 0.00068 25.8 2.9 35 1-39 1-35 (321)
419 3edm_A Short chain dehydrogena 40.0 44 0.0015 23.5 4.6 34 4-40 8-41 (259)
420 3end_A Light-independent proto 39.9 41 0.0014 24.2 4.5 37 5-41 43-79 (307)
421 1tqh_A Carboxylesterase precur 39.9 53 0.0018 22.3 5.0 33 6-38 18-50 (247)
422 3rkr_A Short chain oxidoreduct 39.8 50 0.0017 23.1 4.9 34 4-40 29-62 (262)
423 1mvo_A PHOP response regulator 39.8 50 0.0017 19.9 4.5 31 106-136 46-83 (136)
424 1jil_A Tyrrs, tyrosyl-tRNA syn 39.8 21 0.00073 27.7 3.1 33 7-40 38-73 (420)
425 3ijr_A Oxidoreductase, short c 39.7 47 0.0016 23.8 4.8 35 4-41 47-81 (291)
426 1e7w_A Pteridine reductase; di 39.7 49 0.0017 23.7 4.9 32 4-38 9-40 (291)
427 1ydh_A AT5G11950; structural g 39.7 62 0.0021 22.6 5.2 33 4-36 10-46 (216)
428 2zay_A Response regulator rece 39.6 33 0.0011 21.1 3.6 32 106-137 51-91 (147)
429 2cul_A Glucose-inhibited divis 39.3 22 0.00074 24.6 2.9 35 1-40 1-35 (232)
430 2prs_A High-affinity zinc upta 39.3 39 0.0013 24.4 4.3 44 92-138 211-256 (284)
431 3tqq_A Methionyl-tRNA formyltr 39.3 43 0.0015 24.8 4.6 33 3-40 2-34 (314)
432 1a8s_A Chloroperoxidase F; hal 39.2 43 0.0015 22.9 4.5 32 7-38 22-53 (273)
433 3l6d_A Putative oxidoreductase 39.2 17 0.00059 26.5 2.4 33 3-40 9-41 (306)
434 3dfz_A SIRC, precorrin-2 dehyd 39.1 55 0.0019 22.9 4.9 35 3-42 31-65 (223)
435 3nbm_A PTS system, lactose-spe 39.1 31 0.0011 21.2 3.2 37 2-38 5-41 (108)
436 3noh_A Putative peptide bindin 39.1 24 0.00082 22.5 2.6 17 21-37 78-94 (139)
437 4e08_A DJ-1 beta; flavodoxin-l 39.0 83 0.0028 20.8 6.3 37 4-41 6-42 (190)
438 1cp2_A CP2, nitrogenase iron p 39.0 38 0.0013 23.7 4.2 36 5-40 3-38 (269)
439 4dqx_A Probable oxidoreductase 38.9 50 0.0017 23.5 4.8 34 4-40 27-60 (277)
440 3sc4_A Short chain dehydrogena 38.9 46 0.0016 23.8 4.6 34 4-40 9-42 (285)
441 1cyd_A Carbonyl reductase; sho 38.9 26 0.0009 24.1 3.3 33 5-40 8-40 (244)
442 1zoi_A Esterase; alpha/beta hy 38.9 48 0.0016 22.8 4.7 32 6-38 25-56 (276)
443 3o74_A Fructose transport syst 38.8 80 0.0027 21.7 5.9 31 106-136 57-90 (272)
444 2pnf_A 3-oxoacyl-[acyl-carrier 38.8 26 0.0009 24.1 3.3 34 4-40 7-40 (248)
445 2afh_E Nitrogenase iron protei 38.7 43 0.0015 23.9 4.5 36 5-40 4-39 (289)
446 2vns_A Metalloreductase steap3 38.6 23 0.00079 24.3 2.9 32 4-40 29-60 (215)
447 1xgk_A Nitrogen metabolite rep 38.5 34 0.0012 25.4 4.0 35 3-41 5-39 (352)
448 1efv_B Electron transfer flavo 38.5 44 0.0015 24.0 4.4 30 107-136 116-151 (255)
449 2q8p_A Iron-regulated surface 38.5 27 0.00092 24.5 3.3 32 106-137 59-91 (260)
450 1o97_C Electron transferring f 38.5 43 0.0015 24.1 4.4 30 107-136 112-147 (264)
451 3k30_A Histamine dehydrogenase 38.4 20 0.00068 29.5 2.9 32 4-40 392-423 (690)
452 3u5t_A 3-oxoacyl-[acyl-carrier 38.4 47 0.0016 23.5 4.6 35 3-40 26-60 (267)
453 1zh2_A KDP operon transcriptio 38.4 35 0.0012 20.0 3.5 32 106-137 44-81 (121)
454 3grp_A 3-oxoacyl-(acyl carrier 38.4 54 0.0019 23.1 4.9 34 4-40 27-60 (266)
455 3lf2_A Short chain oxidoreduct 38.3 52 0.0018 23.1 4.8 34 4-40 8-41 (265)
456 1ooe_A Dihydropteridine reduct 38.3 24 0.00082 24.3 3.0 35 1-39 1-35 (236)
457 1sby_A Alcohol dehydrogenase; 38.1 97 0.0033 21.3 6.5 33 5-40 6-39 (254)
458 3gvc_A Oxidoreductase, probabl 38.1 67 0.0023 22.8 5.4 34 4-40 29-62 (277)
459 1efp_B ETF, protein (electron 38.0 43 0.0015 23.9 4.3 30 107-136 113-148 (252)
460 3ksu_A 3-oxoacyl-acyl carrier 38.0 39 0.0013 23.8 4.1 33 4-39 11-43 (262)
461 1tht_A Thioesterase; 2.10A {Vi 38.0 33 0.0011 24.7 3.8 33 5-37 36-68 (305)
462 1nff_A Putative oxidoreductase 38.0 27 0.00093 24.6 3.3 33 5-40 8-40 (260)
463 2bon_A Lipid kinase; DAG kinas 37.9 57 0.0019 24.1 5.1 38 4-41 30-67 (332)
464 2fb6_A Conserved hypothetical 37.8 39 0.0013 21.0 3.6 41 3-43 7-51 (117)
465 2zat_A Dehydrogenase/reductase 37.8 28 0.00094 24.4 3.3 33 5-40 15-47 (260)
466 1jfr_A Lipase; serine hydrolas 37.8 28 0.00095 24.0 3.3 35 6-40 56-90 (262)
467 3uve_A Carveol dehydrogenase ( 37.8 48 0.0016 23.5 4.6 33 4-39 11-43 (286)
468 1tjy_A Sugar transport protein 37.7 76 0.0026 22.7 5.8 31 106-136 59-93 (316)
469 3m3p_A Glutamine amido transfe 37.7 46 0.0016 23.7 4.4 37 1-40 1-37 (250)
470 1x0v_A GPD-C, GPDH-C, glycerol 37.6 11 0.00038 27.9 1.2 36 1-41 6-48 (354)
471 3awd_A GOX2181, putative polyo 37.5 28 0.00096 24.2 3.3 33 5-40 14-46 (260)
472 1u11_A PURE (N5-carboxyaminoim 37.5 71 0.0024 21.8 5.0 44 1-45 19-64 (182)
473 3ju3_A Probable 2-oxoacid ferr 37.4 44 0.0015 20.7 3.8 37 3-41 13-49 (118)
474 3pdu_A 3-hydroxyisobutyrate de 37.4 27 0.00094 25.0 3.2 32 4-40 2-33 (287)
475 4fgs_A Probable dehydrogenase 37.4 50 0.0017 23.9 4.6 33 4-39 29-61 (273)
476 2gwr_A DNA-binding response re 37.3 32 0.0011 23.6 3.5 31 106-136 48-84 (238)
477 3g9k_S Capsule biosynthesis pr 37.2 22 0.00075 24.1 2.5 17 21-37 124-140 (177)
478 3i3l_A Alkylhalidase CMLS; fla 37.1 31 0.0011 27.9 3.8 35 1-40 21-55 (591)
479 1xjc_A MOBB protein homolog; s 37.1 79 0.0027 21.0 5.3 37 5-41 6-42 (169)
480 1a8q_A Bromoperoxidase A1; hal 37.0 50 0.0017 22.6 4.5 32 6-38 22-53 (274)
481 3c3w_A Two component transcrip 37.0 29 0.001 23.6 3.2 32 106-137 46-84 (225)
482 3rht_A (gatase1)-like protein; 37.0 27 0.00091 25.2 3.0 37 3-43 4-42 (259)
483 3heb_A Response regulator rece 36.9 74 0.0025 19.6 5.1 32 106-137 58-98 (152)
484 1uls_A Putative 3-oxoacyl-acyl 36.9 29 0.001 24.1 3.3 32 5-39 6-37 (245)
485 1g3q_A MIND ATPase, cell divis 36.9 41 0.0014 23.0 4.0 36 6-41 5-41 (237)
486 3r6d_A NAD-dependent epimerase 36.8 31 0.0011 23.3 3.3 20 21-40 19-39 (221)
487 2wsb_A Galactitol dehydrogenas 36.8 29 0.001 24.0 3.3 33 5-40 12-44 (254)
488 3orf_A Dihydropteridine reduct 36.8 29 0.001 24.2 3.3 33 5-40 23-55 (251)
489 4fn4_A Short chain dehydrogena 36.7 53 0.0018 23.4 4.6 34 3-39 6-39 (254)
490 1n2z_A Vitamin B12 transport p 36.6 59 0.002 22.5 4.8 39 92-137 49-89 (245)
491 3bdi_A Uncharacterized protein 36.6 42 0.0014 21.7 3.9 36 5-40 28-65 (207)
492 3f9i_A 3-oxoacyl-[acyl-carrier 36.6 30 0.001 24.0 3.3 35 3-40 13-47 (249)
493 3afn_B Carbonyl reductase; alp 36.6 30 0.001 23.9 3.3 33 5-40 8-40 (258)
494 2y0c_A BCEC, UDP-glucose dehyd 36.6 65 0.0022 25.3 5.4 38 3-40 328-370 (478)
495 2q3e_A UDP-glucose 6-dehydroge 36.5 40 0.0014 26.3 4.2 32 1-37 2-36 (467)
496 1zk4_A R-specific alcohol dehy 36.4 30 0.001 23.8 3.3 33 5-40 7-39 (251)
497 2hy5_B Intracellular sulfur ox 36.3 49 0.0017 21.2 4.0 38 5-42 7-47 (136)
498 2ekp_A 2-deoxy-D-gluconate 3-d 36.3 31 0.001 23.8 3.3 33 5-40 3-35 (239)
499 2gf2_A Hibadh, 3-hydroxyisobut 36.2 33 0.0011 24.5 3.5 31 5-40 2-32 (296)
500 3cnb_A DNA-binding response re 36.2 55 0.0019 19.8 4.2 41 94-137 44-93 (143)
No 1
>3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A*
Probab=99.95 E-value=2.6e-27 Score=187.55 Aligned_cols=149 Identities=16% Similarity=0.333 Sum_probs=111.7
Q ss_pred CCeEEEEcCCCCCChHHHHHHHHHHHhCC--CEEEEEeCCCChhhHHhhhccCCCCCCCeeeeecCCCCCCCC-CcccHH
Q 040291 3 RPHVLVLPIPAQGHVIPLLEFSQCLAKQG--FRVTFVNTDYDHKRIMESLEGKNDLGEQIRLVSIPDGMEPWE-DRNDFG 79 (160)
Q Consensus 3 ~~~i~~~~~p~~GH~~P~l~la~~L~~rG--h~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~-~~~~~~ 79 (160)
+.||+++|+|++||++||++|||.|++|| +.|||++++.+..++.+.. ....++++|+.+|++++++. ...+..
T Consensus 13 ~~hvv~~P~p~~GHi~P~l~Lak~L~~~g~~~~vT~~~t~~~~~~~~~~~---~~~~~~i~~~~ipdglp~~~~~~~~~~ 89 (454)
T 3hbf_A 13 LLHVAVLAFPFGTHAAPLLSLVKKIATEAPKVTFSFFCTTTTNDTLFSRS---NEFLPNIKYYNVHDGLPKGYVSSGNPR 89 (454)
T ss_dssp CCEEEEECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECHHHHHHSCSSS---SCCCTTEEEEECCCCCCTTCCCCSCTT
T ss_pred CCEEEEEcCCcccHHHHHHHHHHHHHhCCCCEEEEEEeCHHHHHhhhccc---ccCCCCceEEecCCCCCCCccccCChH
Confidence 67999999999999999999999999999 9999999976554432211 01135799999998877652 222222
Q ss_pred HHHHHHHHhccHHHHHHHHHHhcCCCCCccEEEecCCCccHHHHHHHhCCccEEEccchHHHHHHHHchhhHHhc
Q 040291 80 KLFEKVLQVMPGKLEELIEDINSREDEKLDCFIADGYMAWSMEVAKKMNVRGALFWPSSAASVALLFHIPKLIDD 154 (160)
Q Consensus 80 ~~~~~~~~~~~~~~~~ll~~l~~~~~~~~d~vI~D~~~~~~~~~A~~lgiP~i~~~~~~~~~~~~~~~~~~l~~~ 154 (160)
..+..+.+.+.+.+++.++++.++.+.++||||+|.+++|+.++|+++|||++.||+++++.++.++|++.+.++
T Consensus 90 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iI~D~~~~w~~~vA~~lgIP~~~f~t~~a~~~~~~~~~~~~~~~ 164 (454)
T 3hbf_A 90 EPIFLFIKAMQENFKHVIDEAVAETGKNITCLVTDAFFWFGADLAEEMHAKWVPLWTAGPHSLLTHVYTDLIREK 164 (454)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEETTCTTHHHHHHHTTCEEEEEECSCHHHHHHHHTHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCCCcEEEECCcchHHHHHHHHhCCCEEEEeCccHHHHHHHHhhHHHHhh
Confidence 222333333344455555554221125799999999999999999999999999999999999999999988765
No 2
>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10
Probab=99.94 E-value=8e-27 Score=186.20 Aligned_cols=158 Identities=32% Similarity=0.612 Sum_probs=117.5
Q ss_pred CCCCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCCCChhhHHhhhccCC-CCCCCeeeeecCCCCCCCC----Cc
Q 040291 1 MNRPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKRIMESLEGKN-DLGEQIRLVSIPDGMEPWE----DR 75 (160)
Q Consensus 1 m~~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~-~~~~~i~~~~l~~~~~~~~----~~ 75 (160)
|+++||+++|+|++||++|+++||++|++|||+|||++++.+...+.+...... ...++++|+.++++++..+ ..
T Consensus 6 ~~~~~vl~~p~p~~GHi~P~l~La~~L~~rG~~VT~v~t~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~lp~~~~~~~~~ 85 (482)
T 2pq6_A 6 NRKPHVVMIPYPVQGHINPLFKLAKLLHLRGFHITFVNTEYNHKRLLKSRGPKAFDGFTDFNFESIPDGLTPMEGDGDVS 85 (482)
T ss_dssp --CCEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEEEHHHHHHHC------------CEEEEEECCCCC---------
T ss_pred CCCCEEEEecCccchhHHHHHHHHHHHHhCCCeEEEEeCCchhhhhccccccccccCCCceEEEECCCCCCCcccccCcc
Confidence 456899999999999999999999999999999999999876554432100000 0014799999987665421 12
Q ss_pred ccHHHHHHHHHHhccHHHHHHHHHHhcCC-CCCccEEEecCCCccHHHHHHHhCCccEEEccchHHHHHHHHchhhHHhc
Q 040291 76 NDFGKLFEKVLQVMPGKLEELIEDINSRE-DEKLDCFIADGYMAWSMEVAKKMNVRGALFWPSSAASVALLFHIPKLIDD 154 (160)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~ll~~l~~~~-~~~~d~vI~D~~~~~~~~~A~~lgiP~i~~~~~~~~~~~~~~~~~~l~~~ 154 (160)
.+...++..+.+.+.+.++++++.+.+.. +.++||||+|.++.|+..+|+++|||++.++++++...+.+++++.+...
T Consensus 86 ~~~~~~~~~~~~~~~~~l~~ll~~l~~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~ 165 (482)
T 2pq6_A 86 QDVPTLCQSVRKNFLKPYCELLTRLNHSTNVPPVTCLVSDCCMSFTIQAAEEFELPNVLYFSSSACSLLNVMHFRSFVER 165 (482)
T ss_dssp CCHHHHHHHHTTSSHHHHHHHHHHHHTCSSSCCCCEEEEETTCTHHHHHHHHTTCCEEEEECSCHHHHHHHTTHHHHHHT
T ss_pred hhHHHHHHHHHHHhhHHHHHHHHHHhhhccCCCceEEEECCcchhHHHHHHHcCCCEEEEecccHHHHHHHHHHHHHHhc
Confidence 23444555554667788999999886420 15899999999999999999999999999999999998888888887777
Q ss_pred CCCC
Q 040291 155 GIID 158 (160)
Q Consensus 155 ~~~~ 158 (160)
|++|
T Consensus 166 ~~~p 169 (482)
T 2pq6_A 166 GIIP 169 (482)
T ss_dssp TCSS
T ss_pred CCCC
Confidence 7765
No 3
>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*
Probab=99.90 E-value=5.9e-23 Score=163.87 Aligned_cols=147 Identities=25% Similarity=0.429 Sum_probs=109.7
Q ss_pred CCeEEEEcCCCCCChHHHHHHHHHHHhC-CCEEEEEeCCCC--hhhHHhhhccCCCCCCCeeeeecCCCCCCC-CCcccH
Q 040291 3 RPHVLVLPIPAQGHVIPLLEFSQCLAKQ-GFRVTFVNTDYD--HKRIMESLEGKNDLGEQIRLVSIPDGMEPW-EDRNDF 78 (160)
Q Consensus 3 ~~~i~~~~~p~~GH~~P~l~la~~L~~r-Gh~Vt~~~~~~~--~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~-~~~~~~ 78 (160)
++||+++|+|++||++|+++||++|++| ||+|||+++... ...+.+... ....+++|+.++++.... ....+.
T Consensus 6 ~~~vl~~p~p~~GHv~P~l~La~~L~~r~Gh~Vt~~t~~~~~~~~~~~~~~~---~~~~~i~~~~l~~~~~~~~~~~~~~ 82 (480)
T 2vch_A 6 TPHVAIIPSPGMGHLIPLVEFAKRLVHLHGLTVTFVIAGEGPPSKAQRTVLD---SLPSSISSVFLPPVDLTDLSSSTRI 82 (480)
T ss_dssp CCEEEEECCSCHHHHHHHHHHHHHHHHHHCCEEEEEECCSSSCC-CHHHHHC----CCTTEEEEECCCCCCTTSCTTCCH
T ss_pred CcEEEEecCcchhHHHHHHHHHHHHHhCCCCEEEEEECCCcchhhhhhhhcc---ccCCCceEEEcCCCCCCCCCCchhH
Confidence 4799999999999999999999999998 999999999873 333332100 002589999998642111 111233
Q ss_pred HHHHHHHHHhccHHHHHHHHHHhcCCCCCc-cEEEecCCCccHHHHHHHhCCccEEEccchHHHHHHHHchhhHHhc
Q 040291 79 GKLFEKVLQVMPGKLEELIEDINSREDEKL-DCFIADGYMAWSMEVAKKMNVRGALFWPSSAASVALLFHIPKLIDD 154 (160)
Q Consensus 79 ~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~-d~vI~D~~~~~~~~~A~~lgiP~i~~~~~~~~~~~~~~~~~~l~~~ 154 (160)
...+......+.+.++++++++.+ . .++ ||||+|.++.|+..+|+++|||++.++++++...+.++|+|.+.+.
T Consensus 83 ~~~~~~~~~~~~~~l~~ll~~~~~-~-~~~pd~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~ 157 (480)
T 2vch_A 83 ESRISLTVTRSNPELRKVFDSFVE-G-GRLPTALVVDLFGTDAFDVAVEFHVPPYIFYPTTANVLSFFLHLPKLDET 157 (480)
T ss_dssp HHHHHHHHHTTHHHHHHHHHHHHH-T-TCCCSEEEECTTCGGGHHHHHHTTCCEEEEECSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhhHHHHHHHHHhcc-C-CCCCeEEEECCcchhHHHHHHHcCCCEEEEECccHHHHHHHHHHHHHHhc
Confidence 332223344566778888887642 1 478 9999999999999999999999999999999999999998877653
No 4
>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A*
Probab=99.90 E-value=7.9e-23 Score=162.47 Aligned_cols=143 Identities=18% Similarity=0.301 Sum_probs=107.6
Q ss_pred CCeEEEEcCCCCCChHHHHHHHHHHHhC--CCEEEEEeCCCCh-----hhHHhhhccCCCCCCCeeeeecCCC-CCCCCC
Q 040291 3 RPHVLVLPIPAQGHVIPLLEFSQCLAKQ--GFRVTFVNTDYDH-----KRIMESLEGKNDLGEQIRLVSIPDG-MEPWED 74 (160)
Q Consensus 3 ~~~i~~~~~p~~GH~~P~l~la~~L~~r--Gh~Vt~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~~l~~~-~~~~~~ 74 (160)
++||+++|+|++||++|+++||++|++| ||+|||++++... +.+.+ .. ...++++|+.+|++ .+..+.
T Consensus 9 ~~~vv~~p~p~~GHi~P~l~La~~L~~r~pG~~Vt~v~t~~~~~~~~~~~~~~-~~---~~~~~i~~~~lp~~~~~~~~~ 84 (463)
T 2acv_A 9 NSELIFIPAPGIGHLASALEFAKLLTNHDKNLYITVFCIKFPGMPFADSYIKS-VL---ASQPQIQLIDLPEVEPPPQEL 84 (463)
T ss_dssp CEEEEEECCSSTTTHHHHHHHHHHHHHTCTTEEEEEEECCCTTCCCCHHHHHH-HH---CSCTTEEEEECCCCCCCCGGG
T ss_pred CCEEEEEcCcccchHHHHHHHHHHHHhcCCCcEEEEEEcCCcchhhhhhhhhh-cc---cCCCCceEEECCCCCCCcccc
Confidence 5799999999999999999999999999 9999999998753 11211 11 11258999999875 232111
Q ss_pred cccHHHHHHHHHHhccHHHHHHHHHHhcCCCCCccEEEecCCCccHHHHHHHhCCccEEEccchHHHHHHHHchhhHH
Q 040291 75 RNDFGKLFEKVLQVMPGKLEELIEDINSREDEKLDCFIADGYMAWSMEVAKKMNVRGALFWPSSAASVALLFHIPKLI 152 (160)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~d~vI~D~~~~~~~~~A~~lgiP~i~~~~~~~~~~~~~~~~~~l~ 152 (160)
.......+......+.+.++++++++. +.++||||+|.++.|+..+|+++|||++.++++++..++.++++|.+.
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~ll~~~~---~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~ 159 (463)
T 2acv_A 85 LKSPEFYILTFLESLIPHVKATIKTIL---SNKVVGLVLDFFCVSMIDVGNEFGIPSYLFLTSNVGFLSLMLSLKNRQ 159 (463)
T ss_dssp GGSHHHHHHHHHHHTHHHHHHHHHHHC---CTTEEEEEEEGGGGGGHHHHHHTTCCEEEEESSCHHHHHHHHHGGGSC
T ss_pred cCCccHHHHHHHHhhhHHHHHHHHhcc---CCCCeEEEECCcchhHHHHHHHcCCCEEEEeCchHHHHHHHHHHHhhc
Confidence 111111122233456667888888762 258999999999999999999999999999999999999988888653
No 5
>2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A*
Probab=99.88 E-value=3.1e-22 Score=158.80 Aligned_cols=150 Identities=21% Similarity=0.321 Sum_probs=102.3
Q ss_pred CCCeEEEEcCCCCCChHHHHHHHHHHHhCC--CEEEEEeCCCChhhHHhhhccCCCCCCCeeeeecCCCCCCCC-CcccH
Q 040291 2 NRPHVLVLPIPAQGHVIPLLEFSQCLAKQG--FRVTFVNTDYDHKRIMESLEGKNDLGEQIRLVSIPDGMEPWE-DRNDF 78 (160)
Q Consensus 2 ~~~~i~~~~~p~~GH~~P~l~la~~L~~rG--h~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~-~~~~~ 78 (160)
.++||+++|+|++||++|+++||++|++|| +.||+++++.....+.+... .....+++++.+++++++.. .....
T Consensus 6 ~~~hvv~~p~p~~GHi~P~l~la~~L~~rGh~v~vt~~~t~~~~~~~~~~~~--~~~~~~i~~~~i~~glp~~~~~~~~~ 83 (456)
T 2c1x_A 6 TNPHVAVLAFPFSTHAAPLLAVVRRLAAAAPHAVFSFFSTSQSNASIFHDSM--HTMQCNIKSYDISDGVPEGYVFAGRP 83 (456)
T ss_dssp -CCEEEEECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECHHHHHHHC---------CTTEEEEECCCCCCTTCCCCCCT
T ss_pred CCCEEEEEcCcccchHHHHHHHHHHHHhCCCCeEEEEEeCchhHHHhhcccc--ccCCCceEEEeCCCCCCCcccccCCh
Confidence 358999999999999999999999999996 55688888654333322100 00124799999988765431 11112
Q ss_pred HHHHHHHHHhccHHHHHHHHHHhcCCCCCccEEEecCCCccHHHHHHHhCCccEEEccchHHHHHHHHchhhHHh
Q 040291 79 GKLFEKVLQVMPGKLEELIEDINSREDEKLDCFIADGYMAWSMEVAKKMNVRGALFWPSSAASVALLFHIPKLID 153 (160)
Q Consensus 79 ~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~d~vI~D~~~~~~~~~A~~lgiP~i~~~~~~~~~~~~~~~~~~l~~ 153 (160)
......+.+.+.+.++++++++.+..+.++||||+|.++.|+..+|+++|||++.++++++..++.+.+.+.+.+
T Consensus 84 ~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~ 158 (456)
T 2c1x_A 84 QEDIELFTRAAPESFRQGMVMAVAETGRPVSCLVADAFIWFAADMAAEMGVAWLPFWTAGPNSLSTHVYIDEIRE 158 (456)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHTCCCCEEEEETTSTTHHHHHHHHTCEEEEEECSCHHHHHHHHTHHHHHH
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHhccCCCceEEEECCchHhHHHHHHHhCCCEEEEeCccHHHHHHHhhhHHHHh
Confidence 222222333333445555554432111589999999999999999999999999999999998888877776543
No 6
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=99.84 E-value=2.6e-20 Score=145.72 Aligned_cols=127 Identities=19% Similarity=0.178 Sum_probs=93.2
Q ss_pred CCCCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCCCChhhHHhhhccCCCCCCCeeeeecCCCCCCCC-C----c
Q 040291 1 MNRPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKRIMESLEGKNDLGEQIRLVSIPDGMEPWE-D----R 75 (160)
Q Consensus 1 m~~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~-~----~ 75 (160)
|.++||+++++|++||++|++.|+++|++|||+||+++++...+.+.+ .+++++.++++++... . .
T Consensus 10 m~~~~Il~~~~~~~GHv~p~l~la~~L~~~Gh~V~~~~~~~~~~~~~~---------~g~~~~~~~~~~~~~~~~~~~~~ 80 (424)
T 2iya_A 10 VTPRHISFFNIPGHGHVNPSLGIVQELVARGHRVSYAITDEFAAQVKA---------AGATPVVYDSILPKESNPEESWP 80 (424)
T ss_dssp -CCCEEEEECCSCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHH---------HTCEEEECCCCSCCTTCTTCCCC
T ss_pred cccceEEEEeCCCCcccchHHHHHHHHHHCCCeEEEEeCHHHHHHHHh---------CCCEEEecCccccccccchhhcc
Confidence 566899999999999999999999999999999999999887665554 3788888876543221 1 1
Q ss_pred ccHHHHHHHHHHhccHHHHHHHHHHhcCCCCCccEEEecCCCccHHHHHHHhCCccEEEccchH
Q 040291 76 NDFGKLFEKVLQVMPGKLEELIEDINSREDEKLDCFIADGYMAWSMEVAKKMNVRGALFWPSSA 139 (160)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~d~vI~D~~~~~~~~~A~~lgiP~i~~~~~~~ 139 (160)
.+....+..+.+......+++.+.+++ .+|||||+|.+..|+..+|+++|||++.+++.++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~l~~~l~~---~~pD~VI~d~~~~~~~~~A~~lgIP~v~~~~~~~ 141 (424)
T 2iya_A 81 EDQESAMGLFLDEAVRVLPQLEDAYAD---DRPDLIVYDIASWPAPVLGRKWDIPFVQLSPTFV 141 (424)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHHHHTTT---SCCSEEEEETTCTHHHHHHHHHTCCEEEEESSCC
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhc---cCCCEEEEcCcccHHHHHHHhcCCCEEEEecccc
Confidence 233232333333222334444444432 6899999999988999999999999999987653
No 7
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=99.77 E-value=3.1e-18 Score=132.56 Aligned_cols=124 Identities=15% Similarity=0.120 Sum_probs=84.7
Q ss_pred CCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCCCChhhHHhhhccCCCCCCCeeeeecCCCCCC-------CC--
Q 040291 3 RPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKRIMESLEGKNDLGEQIRLVSIPDGMEP-------WE-- 73 (160)
Q Consensus 3 ~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~-------~~-- 73 (160)
.|||+++++|+.||++|+++||++|++|||+|||++++.+..... .++.+..+..+... ..
T Consensus 22 ~MRIL~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~t~~~~~~~~~----------~g~~~~~~~~~~~~~~~~~~~~~~~ 91 (400)
T 4amg_A 22 SMRALFITSPGLSHILPTVPLAQALRALGHEVRYATGGDIRAVAE----------AGLCAVDVSPGVNYAKLFVPDDTDV 91 (400)
T ss_dssp CCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEECSSTHHHHT----------TTCEEEESSTTCCSHHHHSCCC---
T ss_pred CCeEEEECCCchhHHHHHHHHHHHHHHCCCEEEEEeCcchhhHHh----------cCCeeEecCCchhHhhhcccccccc
Confidence 689999999999999999999999999999999999987765332 35666665432211 00
Q ss_pred -Cc-----ccHHHHHHHHHHhccHHHHHHHHHHhcCCCCCccEEEecCCCccHHHHHHHhCCccEEEccchH
Q 040291 74 -DR-----NDFGKLFEKVLQVMPGKLEELIEDINSREDEKLDCFIADGYMAWSMEVAKKMNVRGALFWPSSA 139 (160)
Q Consensus 74 -~~-----~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~d~vI~D~~~~~~~~~A~~lgiP~i~~~~~~~ 139 (160)
.. .....+...+.......+.++++.+.+ .+||+||+|.+..|+..+|+++|||++.+...+.
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~---~~pD~Vv~d~~~~~~~~~A~~~gip~~~~~~~~~ 160 (400)
T 4amg_A 92 TDPMHSEGLGEGFFAEMFARVSAVAVDGALRTARS---WRPDLVVHTPTQGAGPLTAAALQLPCVELPLGPA 160 (400)
T ss_dssp ---------CHHHHHHHHHHHHHHHHHHHHHHHHH---HCCSEEEECTTCTHHHHHHHHTTCCEEECCSSTT
T ss_pred ccccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHh---cCCCEEEECcchHHHHHHHHHcCCCceeeccccc
Confidence 00 001111112222222233444444433 5899999999999999999999999999876543
No 8
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=99.74 E-value=1.7e-17 Score=128.24 Aligned_cols=124 Identities=18% Similarity=0.229 Sum_probs=89.4
Q ss_pred CCCCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCCCChhhHHhhhccCCCCCCCeeeeecCCCCCCCC-----Cc
Q 040291 1 MNRPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKRIMESLEGKNDLGEQIRLVSIPDGMEPWE-----DR 75 (160)
Q Consensus 1 m~~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~-----~~ 75 (160)
|.++||+++++++.||++|++.|+++|++|||+|+++++....+.+.. .++++..++...+... ..
T Consensus 2 m~M~~il~~~~~~~Ghv~~~~~La~~L~~~GheV~v~~~~~~~~~~~~---------~G~~~~~~~~~~~~~~~~~~~~~ 72 (402)
T 3ia7_A 2 MRQRHILFANVQGHGHVYPSLGLVSELARRGHRITYVTTPLFADEVKA---------AGAEVVLYKSEFDTFHVPEVVKQ 72 (402)
T ss_dssp CCCCEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECHHHHHHHHH---------TTCEEEECCCGGGTSSSSSSSCC
T ss_pred CCCCEEEEEeCCCCcccccHHHHHHHHHhCCCEEEEEcCHHHHHHHHH---------cCCEEEecccccccccccccccc
Confidence 666799999999999999999999999999999999998776665544 4788888875332110 11
Q ss_pred ccHHHHHHH-HHHhccHHHHHHHHHHhcCCCCCccEEEec-CCCccHHHHHHHhCCccEEEcc
Q 040291 76 NDFGKLFEK-VLQVMPGKLEELIEDINSREDEKLDCFIAD-GYMAWSMEVAKKMNVRGALFWP 136 (160)
Q Consensus 76 ~~~~~~~~~-~~~~~~~~~~~ll~~l~~~~~~~~d~vI~D-~~~~~~~~~A~~lgiP~i~~~~ 136 (160)
.+....+.. +.+.....+.++.+.+.+ .+||+||+| .+..++..+|+++|||++.+.+
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~---~~pD~Vi~d~~~~~~~~~aA~~~giP~v~~~~ 132 (402)
T 3ia7_A 73 EDAETQLHLVYVRENVAILRAAEEALGD---NPPDLVVYDVFPFIAGRLLAARWDRPAVRLTG 132 (402)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHHTT---CCCSEEEEESTTHHHHHHHHHHHTCCEEEEES
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHhc---cCCCEEEECchHHHHHHHHHHhhCCCEEEEec
Confidence 222222222 222222334455555543 689999999 7778888899999999999864
No 9
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=99.72 E-value=1.8e-17 Score=129.55 Aligned_cols=122 Identities=14% Similarity=0.161 Sum_probs=83.9
Q ss_pred CeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCCCChhhHHhhhccCCCCCCCeeeeecCCCCCCC-CC-cccHHHH
Q 040291 4 PHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKRIMESLEGKNDLGEQIRLVSIPDGMEPW-ED-RNDFGKL 81 (160)
Q Consensus 4 ~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~-~~-~~~~~~~ 81 (160)
+||+++++++.||++|++.|+++|++|||+|||+++....+.+.+ .+++++.++...... .. .......
T Consensus 1 M~Il~~~~~~~GHv~P~l~la~~L~~~Gh~V~~~~~~~~~~~v~~---------~g~~~~~i~~~~~~~~~~~~~~~~~~ 71 (415)
T 1iir_A 1 MRVLLATCGSRGDTEPLVALAVRVRDLGADVRMCAPPDCAERLAE---------VGVPHVPVGPSARAPIQRAKPLTAED 71 (415)
T ss_dssp CEEEEECCSCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHH---------TTCCEEECCC-------CCSCCCHHH
T ss_pred CeEEEEcCCCchhHHHHHHHHHHHHHCCCeEEEEcCHHHHHHHHH---------cCCeeeeCCCCHHHHhhcccccchHH
Confidence 489999999999999999999999999999999999886655543 478998887543211 01 1111111
Q ss_pred HHHHHHhccHHHHHHHHHHhcCCCCCccEEEecC-CCcc--HHHHHHHhCCccEEEccch
Q 040291 82 FEKVLQVMPGKLEELIEDINSREDEKLDCFIADG-YMAW--SMEVAKKMNVRGALFWPSS 138 (160)
Q Consensus 82 ~~~~~~~~~~~~~~ll~~l~~~~~~~~d~vI~D~-~~~~--~~~~A~~lgiP~i~~~~~~ 138 (160)
...+ +.....+.++++.+.. .+|||||+|. +..| +..+|+++|||++.+++++
T Consensus 72 ~~~~---~~~~~~~~~~~l~~~~-~~pD~vi~d~~~~~~~~~~~~A~~lgiP~v~~~~~~ 127 (415)
T 1iir_A 72 VRRF---TTEAIATQFDEIPAAA-EGCAAVVTTGLLAAAIGVRSVAEKLGIPYFYAFHCP 127 (415)
T ss_dssp HHHH---HHHHHHHHHHHHHHHT-TTCSEEEEESCHHHHHHHHHHHHHHTCCEEEEESSG
T ss_pred HHHH---HHHHHHHHHHHHHHHh-cCCCEEEECChhHhHhhHHHHHHHhCCCEEEEecCC
Confidence 1111 1112233344433111 5899999998 6678 8899999999999998766
No 10
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=99.72 E-value=7.5e-17 Score=126.13 Aligned_cols=126 Identities=21% Similarity=0.207 Sum_probs=88.2
Q ss_pred CCCCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCCCChhhHHhhhccCCCCCCCeeeeecCCCCCCCC-C----c
Q 040291 1 MNRPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKRIMESLEGKNDLGEQIRLVSIPDGMEPWE-D----R 75 (160)
Q Consensus 1 m~~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~-~----~ 75 (160)
|.++||++++.++.||++|++.|+++|++|||+|+++++....+.+.+ .+++++.++...+... . .
T Consensus 5 m~m~kIl~~~~~~~Gh~~p~~~la~~L~~~G~~V~~~~~~~~~~~~~~---------~g~~~~~~~~~~~~~~~~~~~~~ 75 (430)
T 2iyf_A 5 TTPAHIAMFSIAAHGHVNPSLEVIRELVARGHRVTYAIPPVFADKVAA---------TGPRPVLYHSTLPGPDADPEAWG 75 (430)
T ss_dssp ---CEEEEECCSCHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHT---------TSCEEEECCCCSCCTTSCGGGGC
T ss_pred cccceEEEEeCCCCccccchHHHHHHHHHCCCeEEEEeCHHHHHHHHh---------CCCEEEEcCCcCccccccccccc
Confidence 445799999999999999999999999999999999999876554433 4788888876433221 1 1
Q ss_pred ccHHHHHHHHHHhccHHHHHHHHHHhcCCCCCccEEEecCCCccHHHHHHHhCCccEEEccch
Q 040291 76 NDFGKLFEKVLQVMPGKLEELIEDINSREDEKLDCFIADGYMAWSMEVAKKMNVRGALFWPSS 138 (160)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~d~vI~D~~~~~~~~~A~~lgiP~i~~~~~~ 138 (160)
.+....+..+...+...+.++.+.+++ .+||+||+|.+..++..+|+++|||++.+++.+
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~l~~~l~~---~~pD~Vi~d~~~~~~~~~A~~~giP~v~~~~~~ 135 (430)
T 2iyf_A 76 STLLDNVEPFLNDAIQALPQLADAYAD---DIPDLVLHDITSYPARVLARRWGVPAVSLSPNL 135 (430)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHHHHHTT---SCCSEEEEETTCHHHHHHHHHHTCCEEEEESSC
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHhhc---cCCCEEEECCccHHHHHHHHHcCCCEEEEeccc
Confidence 222222222222222234444444433 689999999987788899999999999988654
No 11
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=99.68 E-value=1.7e-16 Score=123.53 Aligned_cols=123 Identities=15% Similarity=0.197 Sum_probs=87.7
Q ss_pred CCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCCCChhhHHhhhccCCCCCCCeeeeecCCCCCCCCC-----ccc
Q 040291 3 RPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKRIMESLEGKNDLGEQIRLVSIPDGMEPWED-----RND 77 (160)
Q Consensus 3 ~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~-----~~~ 77 (160)
++||+++++++.||++|++.|+++|++|||+|+++++....+.+.+ .++++..++...+.... ..+
T Consensus 20 m~rIl~~~~~~~GHv~p~l~La~~L~~~Gh~V~v~~~~~~~~~~~~---------~G~~~~~~~~~~~~~~~~~~~~~~~ 90 (415)
T 3rsc_A 20 MAHLLIVNVASHGLILPTLTVVTELVRRGHRVSYVTAGGFAEPVRA---------AGATVVPYQSEIIDADAAEVFGSDD 90 (415)
T ss_dssp CCEEEEECCSCHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHH---------TTCEEEECCCSTTTCCHHHHHHSSS
T ss_pred CCEEEEEeCCCccccccHHHHHHHHHHCCCEEEEEeCHHHHHHHHh---------cCCEEEeccccccccccchhhcccc
Confidence 4799999999999999999999999999999999998877766654 57999888754432210 001
Q ss_pred HHHHHHH-HHHhccHHHHHHHHHHhcCCCCCccEEEec-CCCccHHHHHHHhCCccEEEccc
Q 040291 78 FGKLFEK-VLQVMPGKLEELIEDINSREDEKLDCFIAD-GYMAWSMEVAKKMNVRGALFWPS 137 (160)
Q Consensus 78 ~~~~~~~-~~~~~~~~~~~ll~~l~~~~~~~~d~vI~D-~~~~~~~~~A~~lgiP~i~~~~~ 137 (160)
....+.. +.+.....+.++.+.+.+ .+||+||+| ....++..+|+++|||++.+.+.
T Consensus 91 ~~~~~~~~~~~~~~~~~~~l~~~l~~---~~PDlVi~d~~~~~~~~~aA~~~giP~v~~~~~ 149 (415)
T 3rsc_A 91 LGVRPHLMYLRENVSVLRATAEALDG---DVPDLVLYDDFPFIAGQLLAARWRRPAVRLSAA 149 (415)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHSS---SCCSEEEEESTTHHHHHHHHHHTTCCEEEEESS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhc---cCCCEEEECchhhhHHHHHHHHhCCCEEEEEec
Confidence 1111111 222222234444444443 689999999 77788888999999999998743
No 12
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=99.65 E-value=3.3e-16 Score=122.33 Aligned_cols=122 Identities=16% Similarity=0.098 Sum_probs=82.9
Q ss_pred CeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCCCChhhHHhhhccCCCCCCCeeeeecCCCCCCC-CC--cccHHH
Q 040291 4 PHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKRIMESLEGKNDLGEQIRLVSIPDGMEPW-ED--RNDFGK 80 (160)
Q Consensus 4 ~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~-~~--~~~~~~ 80 (160)
+||++++.++.||++|++.|+++|++|||+|||++++...+.+.. .+++++.++...... .. ......
T Consensus 1 MrIl~~~~~~~GH~~p~l~la~~L~~~Gh~V~~~~~~~~~~~v~~---------~g~~~~~~~~~~~~~~~~~~~~~~~~ 71 (416)
T 1rrv_A 1 MRVLLSVCGTRGDVEIGVALADRLKALGVQTRMCAPPAAEERLAE---------VGVPHVPVGLPQHMMLQEGMPPPPPE 71 (416)
T ss_dssp CEEEEEEESCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHH---------HTCCEEECSCCGGGCCCTTSCCCCHH
T ss_pred CeEEEEecCCCccHHHHHHHHHHHHHCCCeEEEEeCHHHHHHHHH---------cCCeeeecCCCHHHHHhhccccchhH
Confidence 489999999999999999999999999999999999876655544 478888887542111 00 011111
Q ss_pred HHHHHHHhccHHHHHHHHHHhcCCCCCccEEEecCC-Ccc--HHHHHHHhCCccEEEccch
Q 040291 81 LFEKVLQVMPGKLEELIEDINSREDEKLDCFIADGY-MAW--SMEVAKKMNVRGALFWPSS 138 (160)
Q Consensus 81 ~~~~~~~~~~~~~~~ll~~l~~~~~~~~d~vI~D~~-~~~--~~~~A~~lgiP~i~~~~~~ 138 (160)
....+. .....++++.+.+.. .+|||||+|.+ ..+ +..+|+++|||++.+++++
T Consensus 72 ~~~~~~---~~~~~~~~~~l~~~~-~~pD~vi~d~~~~~~~~~~~~A~~~giP~v~~~~~~ 128 (416)
T 1rrv_A 72 EEQRLA---AMTVEMQFDAVPGAA-EGCAAVVAVGDLAAATGVRSVAEKLGLPFFYSVPSP 128 (416)
T ss_dssp HHHHHH---HHHHHHHHHHHHHHT-TTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSG
T ss_pred HHHHHH---HHHHHHHHHHHHHHh-cCCCEEEEcCchHHHHHHHHHHHHcCCCEEEEeCCC
Confidence 111111 112233344433111 58999999974 456 7889999999999987665
No 13
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=99.64 E-value=1e-15 Score=120.45 Aligned_cols=125 Identities=13% Similarity=0.113 Sum_probs=88.4
Q ss_pred CCCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCCCChhhHHhhhccCCCCCCCeeeeecCCCCCC-C-C------
Q 040291 2 NRPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKRIMESLEGKNDLGEQIRLVSIPDGMEP-W-E------ 73 (160)
Q Consensus 2 ~~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~-~-~------ 73 (160)
..+||++++.++.||++|++.|+++|++|||+|+|++++...+.+.. .|++++.++..... . .
T Consensus 19 ~~mrIl~~~~~~~GHv~p~l~la~~L~~~GheV~~~~~~~~~~~v~~---------~G~~~~~i~~~~~~~~~~~~~~~~ 89 (441)
T 2yjn_A 19 SHMRVVFSSMASKSHLFGLVPLAWAFRAAGHEVRVVASPALTEDITA---------AGLTAVPVGTDVDLVDFMTHAGHD 89 (441)
T ss_dssp CCCEEEEECCSCHHHHTTTHHHHHHHHHTTCEEEEEECGGGHHHHHT---------TTCCEEECSCCCCHHHHHHHTTHH
T ss_pred CccEEEEEcCCCcchHhHHHHHHHHHHHCCCeEEEEeCchhHHHHHh---------CCCceeecCCccchHHHhhhhhcc
Confidence 35799999999999999999999999999999999999876655543 57899888754210 0 0
Q ss_pred --------C-----cc--cHH---HHHHHHHHh----c-cH-HHHHHHHHHhcCCCCCccEEEecCCCccHHHHHHHhCC
Q 040291 74 --------D-----RN--DFG---KLFEKVLQV----M-PG-KLEELIEDINSREDEKLDCFIADGYMAWSMEVAKKMNV 129 (160)
Q Consensus 74 --------~-----~~--~~~---~~~~~~~~~----~-~~-~~~~ll~~l~~~~~~~~d~vI~D~~~~~~~~~A~~lgi 129 (160)
+ .. ... .....+.+. + .. .+.++++.+++ .+||+||+|.+..++..+|+++||
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~---~~pDlVv~d~~~~~~~~aA~~lgi 166 (441)
T 2yjn_A 90 IIDYVRSLDFSERDPATLTWEHLLGMQTVLTPTFYALMSPDTLIEGMVSFCRK---WRPDLVIWEPLTFAAPIAAAVTGT 166 (441)
T ss_dssp HHHHHTTCCCTTCCGGGGSHHHHHHHHHHHHHHTTTTSSCHHHHHHHHHHHHH---HCCSEEEECTTCTHHHHHHHHHTC
T ss_pred cccccccccccccCcchhhhhhhhhHHHHHHHHHHhhcchHHHHHHHHHHHHh---cCCCEEEecCcchhHHHHHHHcCC
Confidence 0 10 111 111112111 1 12 56666655543 589999999988888999999999
Q ss_pred ccEEEccch
Q 040291 130 RGALFWPSS 138 (160)
Q Consensus 130 P~i~~~~~~ 138 (160)
|++.+...+
T Consensus 167 P~v~~~~~~ 175 (441)
T 2yjn_A 167 PHARLLWGP 175 (441)
T ss_dssp CEEEECSSC
T ss_pred CEEEEecCC
Confidence 999986654
No 14
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=99.59 E-value=1.4e-14 Score=112.29 Aligned_cols=119 Identities=16% Similarity=0.232 Sum_probs=83.5
Q ss_pred CCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCCCChhhHHhhhccCCCCCCCeeeeecCCCCC------------
Q 040291 3 RPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKRIMESLEGKNDLGEQIRLVSIPDGME------------ 70 (160)
Q Consensus 3 ~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~------------ 70 (160)
.+||++++.++.||++|++.|+++|.+|||+|+++++ ...+.+.. .++++..++.+..
T Consensus 20 ~MrIl~~~~~~~Ghv~~~~~La~~L~~~GheV~v~~~-~~~~~~~~---------~G~~~~~~~~~~~~~~~~~~~~~~~ 89 (398)
T 3oti_A 20 HMRVLFVSSPGIGHLFPLIQLAWGFRTAGHDVLIAVA-EHADRAAA---------AGLEVVDVAPDYSAVKVFEQVAKDN 89 (398)
T ss_dssp CCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEES-SCHHHHHT---------TTCEEEESSTTCCHHHHHHHHHHHC
T ss_pred cCEEEEEcCCCcchHhHHHHHHHHHHHCCCEEEEecc-chHHHHHh---------CCCeeEecCCccCHHHHhhhcccCC
Confidence 4799999999999999999999999999999999999 66655543 5888888874311
Q ss_pred ----------CCCCcccHHHHHHHHHHhccHHHHHHHHHHhcCCCCCccEEEecCCCccHHHHHHHhCCccEEEccc
Q 040291 71 ----------PWEDRNDFGKLFEKVLQVMPGKLEELIEDINSREDEKLDCFIADGYMAWSMEVAKKMNVRGALFWPS 137 (160)
Q Consensus 71 ----------~~~~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~d~vI~D~~~~~~~~~A~~lgiP~i~~~~~ 137 (160)
...........+...... .+.++.+.+++ .+||+||+|....++..+|+++|||++.....
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~l~~~l~~---~~pDlVv~d~~~~~~~~aA~~~giP~v~~~~~ 160 (398)
T 3oti_A 90 PRFAETVATRPAIDLEEWGVQIAAVNRP---LVDGTMALVDD---YRPDLVVYEQGATVGLLAADRAGVPAVQRNQS 160 (398)
T ss_dssp HHHHHTGGGSCCCSGGGGHHHHHHHHGG---GHHHHHHHHHH---HCCSEEEEETTCHHHHHHHHHHTCCEEEECCT
T ss_pred ccccccccCChhhhHHHHHHHHHHHHHH---HHHHHHHHHHH---cCCCEEEECchhhHHHHHHHHcCCCEEEEecc
Confidence 000011111222222222 23333333332 58999999988888888999999999987654
No 15
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=99.59 E-value=2e-14 Score=110.85 Aligned_cols=123 Identities=11% Similarity=0.035 Sum_probs=83.7
Q ss_pred CeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCCCChhhHHhhhccCCCCCCCeeeeecCCCCC-C-----------
Q 040291 4 PHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKRIMESLEGKNDLGEQIRLVSIPDGME-P----------- 71 (160)
Q Consensus 4 ~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~-~----------- 71 (160)
+||++++.++.||++|++.|+++|++|||+|+++++....+.+.. .++++..++.... .
T Consensus 1 MrIl~~~~~~~Gh~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~---------~g~~~~~~~~~~~~~~~~~~~~~~~~ 71 (384)
T 2p6p_A 1 MRILFVAAGSPATVFALAPLATAARNAGHQVVMAANQDMGPVVTG---------VGLPAVATTDLPIRHFITTDREGRPE 71 (384)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHH---------TTCCEEESCSSCHHHHHHBCTTSCBC
T ss_pred CEEEEEeCCccchHhHHHHHHHHHHHCCCEEEEEeCHHHHHHHHh---------CCCEEEEeCCcchHHHHhhhcccCcc
Confidence 489999999999999999999999999999999998876544433 4788877764320 0
Q ss_pred CCCcc-cHHHHH-HH-HHHhccHHHHHHHHHHhcCCCCCccEEEecCCCccHHHHHHHhCCccEEEccch
Q 040291 72 WEDRN-DFGKLF-EK-VLQVMPGKLEELIEDINSREDEKLDCFIADGYMAWSMEVAKKMNVRGALFWPSS 138 (160)
Q Consensus 72 ~~~~~-~~~~~~-~~-~~~~~~~~~~~ll~~l~~~~~~~~d~vI~D~~~~~~~~~A~~lgiP~i~~~~~~ 138 (160)
..... .....+ .. +.......+.++.+.+++ .+||+||+|.+..++..+|+++|||++.++..+
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~---~~pD~Vi~~~~~~~~~~~a~~~giP~v~~~~~~ 138 (384)
T 2p6p_A 72 AIPSDPVAQARFTGRWFARMAASSLPRMLDFSRA---WRPDLIVGGTMSYVAPLLALHLGVPHARQTWDA 138 (384)
T ss_dssp CCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HCCSEEEEETTCTHHHHHHHHHTCCEEEECCSS
T ss_pred ccCcchHHHHHHHHHHHHhhHHHHHHHHHHHHhc---cCCcEEEECcchhhHHHHHHhcCCCEEEeccCC
Confidence 00010 111111 11 111222234444444433 589999999988888889999999999987543
No 16
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=99.55 E-value=5.7e-15 Score=115.11 Aligned_cols=122 Identities=16% Similarity=0.149 Sum_probs=81.6
Q ss_pred CeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCCCChhhHHhhhccCCCCCCCeeeeecCCCCCCCC--CcccHHHH
Q 040291 4 PHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKRIMESLEGKNDLGEQIRLVSIPDGMEPWE--DRNDFGKL 81 (160)
Q Consensus 4 ~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~--~~~~~~~~ 81 (160)
+||++++.++.||++|++.|+++|.+|||+|+|+++....+.+++ .++++..++....... ........
T Consensus 1 MrIli~~~gt~Ghv~p~~~La~~L~~~Gh~V~v~~~~~~~~~v~~---------~g~~~~~l~~~~~~~~~~~~~~~~~~ 71 (404)
T 3h4t_A 1 MGVLITGCGSRGDTEPLVALAARLRELGADARMCLPPDYVERCAE---------VGVPMVPVGRAVRAGAREPGELPPGA 71 (404)
T ss_dssp -CEEEEEESSHHHHHHHHHHHHHHHHTTCCEEEEECGGGHHHHHH---------TTCCEEECSSCSSGGGSCTTCCCTTC
T ss_pred CeEEEEeCCCCccHHHHHHHHHHHHHCCCeEEEEeCHHHHHHHHH---------cCCceeecCCCHHHHhccccCCHHHH
Confidence 589999999999999999999999999999999999887766654 4788888864322110 00000000
Q ss_pred HHHHHHhccHHHHHHHHHHhcCCCCCccEEEecCCCccH---HHHHHHhCCccEEEccchH
Q 040291 82 FEKVLQVMPGKLEELIEDINSREDEKLDCFIADGYMAWS---MEVAKKMNVRGALFWPSSA 139 (160)
Q Consensus 82 ~~~~~~~~~~~~~~ll~~l~~~~~~~~d~vI~D~~~~~~---~~~A~~lgiP~i~~~~~~~ 139 (160)
...+.......++++.+.+ .++|+||+|....++ ..+|+++|||++.+..++.
T Consensus 72 ~~~~~~~~~~~~~~l~~~~-----~~pD~Vi~~~~~~~~~~a~~~A~~lgiP~v~~~~~p~ 127 (404)
T 3h4t_A 72 AEVVTEVVAEWFDKVPAAI-----EGCDAVVTTGLLPAAVAVRSMAEKLGIPYRYTVLSPD 127 (404)
T ss_dssp GGGHHHHHHHHHHHHHHHH-----TTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGG
T ss_pred HHHHHHHHHHHHHHHHHHh-----cCCCEEEECCchhhhhhhhhHHhhcCCCEEEEEcCCc
Confidence 1111112222233333322 368999998765544 6789999999998877654
No 17
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=99.54 E-value=2.1e-14 Score=111.30 Aligned_cols=123 Identities=13% Similarity=0.115 Sum_probs=83.7
Q ss_pred CCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCCCChhhHHhhhccCCCCCCCeeeeecCCCCC---------CCC
Q 040291 3 RPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKRIMESLEGKNDLGEQIRLVSIPDGME---------PWE 73 (160)
Q Consensus 3 ~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~---------~~~ 73 (160)
++||++++.++.||++|++.|+++|.+|||+|++++++...+.+.. .++++..++.... ...
T Consensus 15 ~MrIl~~~~~~~gh~~~~~~La~~L~~~GheV~v~~~~~~~~~~~~---------~G~~~~~~~~~~~~~~~~~~~~~~~ 85 (398)
T 4fzr_A 15 HMRILVIAGCSEGFVMPLVPLSWALRAAGHEVLVAASENMGPTVTG---------AGLPFAPTCPSLDMPEVLSWDREGN 85 (398)
T ss_dssp CCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEEEGGGHHHHHH---------TTCCEEEEESSCCHHHHHSBCTTSC
T ss_pred ceEEEEEcCCCcchHHHHHHHHHHHHHCCCEEEEEcCHHHHHHHHh---------CCCeeEecCCccchHhhhhhhccCc
Confidence 5899999999999999999999999999999999998776665544 4677777653110 000
Q ss_pred ------Cccc-HHHHHHHHHHhccHHHHHHHHHHhcCCCCCccEEEecCCCccHHHHHHHhCCccEEEccc
Q 040291 74 ------DRND-FGKLFEKVLQVMPGKLEELIEDINSREDEKLDCFIADGYMAWSMEVAKKMNVRGALFWPS 137 (160)
Q Consensus 74 ------~~~~-~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~d~vI~D~~~~~~~~~A~~lgiP~i~~~~~ 137 (160)
.... .......+.......+.++.+.+++ .+||+||+|....++..+|+++|||++.+...
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~---~~pDlVv~d~~~~~~~~~a~~~giP~v~~~~~ 153 (398)
T 4fzr_A 86 RTTMPREEKPLLEHIGRGYGRLVLRMRDEALALAER---WKPDLVLTETYSLTGPLVAATLGIPWIEQSIR 153 (398)
T ss_dssp BCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HCCSEEEEETTCTHHHHHHHHHTCCEEEECCS
T ss_pred ccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHh---CCCCEEEECccccHHHHHHHhhCCCEEEeccC
Confidence 0001 1111111112222223344433333 68999999987788888999999999987754
No 18
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=99.50 E-value=9.2e-14 Score=107.23 Aligned_cols=124 Identities=14% Similarity=0.152 Sum_probs=80.5
Q ss_pred CCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCCCChhhHHhhhccCCCCCCCeeeeec-CCCCC--C--------
Q 040291 3 RPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKRIMESLEGKNDLGEQIRLVSI-PDGME--P-------- 71 (160)
Q Consensus 3 ~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l-~~~~~--~-------- 71 (160)
++||++++.++.||++|++.|+++|.+|||+|+++++....+.+.. .++++..+ +.... .
T Consensus 1 ~MrIl~~~~~~~gh~~~~~~la~~L~~~GheV~v~~~~~~~~~~~~---------~g~~~~~~~~~~~~~~~~~~~~~~~ 71 (391)
T 3tsa_A 1 HMRVLVVPLPYPTHLMAMVPLCWALQASGHEVLIAAPPELQATAHG---------AGLTTAGIRGNDRTGDTGGTTQLRF 71 (391)
T ss_dssp CCEEEEECCSCHHHHHTTHHHHHHHHHTTCEEEEEECHHHHHHHHH---------BTCEEEEC--------------CCS
T ss_pred CcEEEEEcCCCcchhhhHHHHHHHHHHCCCEEEEecChhhHHHHHh---------CCCceeeecCCccchhhhhhhcccc
Confidence 4799999999999999999999999999999999998765555543 46777776 32110 0
Q ss_pred CCC----c--ccHHHHHHHHHHhc----cHHHHHHHHHHhcCCCCCccEEEecCCCccHHHHHHHhCCccEEEccch
Q 040291 72 WED----R--NDFGKLFEKVLQVM----PGKLEELIEDINSREDEKLDCFIADGYMAWSMEVAKKMNVRGALFWPSS 138 (160)
Q Consensus 72 ~~~----~--~~~~~~~~~~~~~~----~~~~~~ll~~l~~~~~~~~d~vI~D~~~~~~~~~A~~lgiP~i~~~~~~ 138 (160)
... . ......+......+ ...+.++.+.+.+ .+||+||+|....++..+|+++|||++.+....
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~---~~PD~Vv~~~~~~~~~~aa~~~giP~v~~~~~~ 145 (391)
T 3tsa_A 72 PNPAFGQRDTEAGRQLWEQTASNVAQSSLDQLPEYLRLAEA---WRPSVLLVDVCALIGRVLGGLLDLPVVLHRWGV 145 (391)
T ss_dssp CCGGGGCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HCCSEEEEETTCHHHHHHHHHTTCCEEEECCSC
T ss_pred cccccccccchhHHHHHHHHHHHHhhcchhhHHHHHHHHHh---cCCCEEEeCcchhHHHHHHHHhCCCEEEEecCC
Confidence 000 0 01111111111111 1113333333333 589999999877777889999999999985443
No 19
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=99.41 E-value=9e-13 Score=102.13 Aligned_cols=120 Identities=18% Similarity=0.121 Sum_probs=80.7
Q ss_pred CCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCCCChhhHHhhhccCCCCCCCeeeeecCCCC------------C
Q 040291 3 RPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKRIMESLEGKNDLGEQIRLVSIPDGM------------E 70 (160)
Q Consensus 3 ~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~------------~ 70 (160)
++||++++.++.||++|++.|+++|.++||+|+++++....+.+.. .++++..++.+. .
T Consensus 20 ~MrIl~~~~~~~Gh~~~~~~la~~L~~~GheV~v~~~~~~~~~~~~---------~g~~~~~~~~~~~~~~~~~~~~~~~ 90 (412)
T 3otg_A 20 HMRVLFASLGTHGHTYPLLPLATAARAAGHEVTFATGEGFAGTLRK---------LGFEPVATGMPVFDGFLAALRIRFD 90 (412)
T ss_dssp SCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHH---------TTCEEEECCCCHHHHHHHHHHHHHS
T ss_pred eeEEEEEcCCCcccHHHHHHHHHHHHHCCCEEEEEccHHHHHHHHh---------cCCceeecCcccccchhhhhhhhhc
Confidence 5799999999999999999999999999999999999866444433 478888776310 0
Q ss_pred C-CC---C----cccHHHHHHHH-HHhccHHHHHHHHHHhcCCCCCccEEEecCCCccHHHHHHHhCCccEEEccc
Q 040291 71 P-WE---D----RNDFGKLFEKV-LQVMPGKLEELIEDINSREDEKLDCFIADGYMAWSMEVAKKMNVRGALFWPS 137 (160)
Q Consensus 71 ~-~~---~----~~~~~~~~~~~-~~~~~~~~~~ll~~l~~~~~~~~d~vI~D~~~~~~~~~A~~lgiP~i~~~~~ 137 (160)
. .. . .......+... .......+.+++++ .+||+||.|....++..+|+++|||++.....
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~------~~pDvVv~~~~~~~~~~aa~~~giP~v~~~~~ 160 (412)
T 3otg_A 91 TDSPEGLTPEQLSELPQIVFGRVIPQRVFDELQPVIER------LRPDLVVQEISNYGAGLAALKAGIPTICHGVG 160 (412)
T ss_dssp CSCCTTCCHHHHTTSHHHHHHTHHHHHHHHHHHHHHHH------HCCSEEEEETTCHHHHHHHHHHTCCEEEECCS
T ss_pred ccCCccCChhHhhHHHHHHHhccchHHHHHHHHHHHHh------cCCCEEEECchhhHHHHHHHHcCCCEEEeccc
Confidence 0 00 0 00111111111 11111223334433 58999999987777788899999999987554
No 20
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=99.23 E-value=5.3e-11 Score=91.68 Aligned_cols=114 Identities=16% Similarity=0.200 Sum_probs=70.4
Q ss_pred CCCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCCCChh-hHHhhhccCCCCCCCeeeeecCCC-CCCCCCc---c
Q 040291 2 NRPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHK-RIMESLEGKNDLGEQIRLVSIPDG-MEPWEDR---N 76 (160)
Q Consensus 2 ~~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~~~~-~~~~~~~~~~~~~~~i~~~~l~~~-~~~~~~~---~ 76 (160)
=+.||++...+..||++|.+.||++|.+|||+|+|+++....+ .+.+. .++++..++.. ++..... .
T Consensus 1 M~~~i~i~~GGTgGHi~palala~~L~~~g~~V~~vg~~~g~e~~~v~~--------~g~~~~~i~~~~~~~~~~~~~~~ 72 (365)
T 3s2u_A 1 MKGNVLIMAGGTGGHVFPALACAREFQARGYAVHWLGTPRGIENDLVPK--------AGLPLHLIQVSGLRGKGLKSLVK 72 (365)
T ss_dssp --CEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECSSSTHHHHTGG--------GTCCEEECC--------------
T ss_pred CCCcEEEEcCCCHHHHHHHHHHHHHHHhCCCEEEEEECCchHhhchhhh--------cCCcEEEEECCCcCCCCHHHHHH
Confidence 0468998887777999999999999999999999998875432 22111 46777777632 2110000 1
Q ss_pred cHHHHHHHHHHhccHHHHHHHHHHhcCCCCCccEEEecCCCcc--HHHHHHHhCCccEEE
Q 040291 77 DFGKLFEKVLQVMPGKLEELIEDINSREDEKLDCFIADGYMAW--SMEVAKKMNVRGALF 134 (160)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~d~vI~D~~~~~--~~~~A~~lgiP~i~~ 134 (160)
....++..+. ....++++ .+||+||.+..... +...|..+|||++..
T Consensus 73 ~~~~~~~~~~-----~~~~~l~~------~~PDvVi~~g~~~s~p~~laA~~~~iP~vih 121 (365)
T 3s2u_A 73 APLELLKSLF-----QALRVIRQ------LRPVCVLGLGGYVTGPGGLAARLNGVPLVIH 121 (365)
T ss_dssp CHHHHHHHHH-----HHHHHHHH------HCCSEEEECSSSTHHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHH-----HHHHHHHh------cCCCEEEEcCCcchHHHHHHHHHcCCCEEEE
Confidence 1112221111 12344554 58999998875543 345688899999974
No 21
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=98.68 E-value=1.9e-07 Score=70.82 Aligned_cols=117 Identities=17% Similarity=0.181 Sum_probs=70.6
Q ss_pred CCC--CeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCCCChh--hHHhhhccCCCCCCCeeeeecCCCCCCCCCcc
Q 040291 1 MNR--PHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHK--RIMESLEGKNDLGEQIRLVSIPDGMEPWEDRN 76 (160)
Q Consensus 1 m~~--~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~~~~--~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~~ 76 (160)
|.+ +||++++.+..||..+...|+++|+++||+|++++...... .+.. .++++..++...... .
T Consensus 2 M~~m~mkIl~~~~~~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~---------~g~~~~~~~~~~~~~---~ 69 (364)
T 1f0k_A 2 MSGQGKRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTADRMEADLVPK---------HGIEIDFIRISGLRG---K 69 (364)
T ss_dssp -----CEEEEECCSSHHHHHHHHHHHHHHHTTTCEEEEEECTTSTHHHHGGG---------GTCEEEECCCCCCTT---C
T ss_pred CCCCCcEEEEEeCCCccchhHHHHHHHHHHHcCCEEEEEecCCcchhhhccc---------cCCceEEecCCccCc---C
Confidence 555 79999997777999999999999999999999999875422 1211 367776664321011 1
Q ss_pred cHHHHHH---HHHHhccHHHHHHHHHHhcCCCCCccEEEecCCCc--cHHHHHHHhCCccEEEcc
Q 040291 77 DFGKLFE---KVLQVMPGKLEELIEDINSREDEKLDCFIADGYMA--WSMEVAKKMNVRGALFWP 136 (160)
Q Consensus 77 ~~~~~~~---~~~~~~~~~~~~ll~~l~~~~~~~~d~vI~D~~~~--~~~~~A~~lgiP~i~~~~ 136 (160)
.....+. ...... ..+.+++++ .+||+|+++.... .+..++...|+|++....
T Consensus 70 ~~~~~~~~~~~~~~~~-~~l~~~l~~------~~pDvv~~~~~~~~~~~~~~~~~~~~p~v~~~~ 127 (364)
T 1f0k_A 70 GIKALIAAPLRIFNAW-RQARAIMKA------YKPDVVLGMGGYVSGPGGLAAWSLGIPVVLHEQ 127 (364)
T ss_dssp CHHHHHTCHHHHHHHH-HHHHHHHHH------HCCSEEEECSSTTHHHHHHHHHHTTCCEEEEEC
T ss_pred ccHHHHHHHHHHHHHH-HHHHHHHHh------cCCCEEEEeCCcCchHHHHHHHHcCCCEEEEec
Confidence 1111110 000111 123334443 5899999886442 245677888999987543
No 22
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=97.43 E-value=0.0024 Score=48.94 Aligned_cols=133 Identities=17% Similarity=0.133 Sum_probs=67.6
Q ss_pred CCCeEEEEcCC-----CCCChHHHHHHHHHHHhCCCEEEEEeCCCChhhHH---------hhhc--cCCCCCCCeeeeec
Q 040291 2 NRPHVLVLPIP-----AQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKRIM---------ESLE--GKNDLGEQIRLVSI 65 (160)
Q Consensus 2 ~~~~i~~~~~p-----~~GH~~P~l~la~~L~~rGh~Vt~~~~~~~~~~~~---------~~~~--~~~~~~~~i~~~~l 65 (160)
+++||++++.- ..|--.-+..|+++|+++||+|+++++......-. .... .......++++..+
T Consensus 1 r~MkIl~v~~~~~p~~~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~ 80 (439)
T 3fro_A 1 RHMKVLLLGFEFLPVKVGGLAEALTAISEALASLGHEVLVFTPSHGRFQGEEIGKIRVFGEEVQVKVSYEERGNLRIYRI 80 (439)
T ss_dssp CCCEEEEECSCCTTSCSSSHHHHHHHHHHHHHHTTCEEEEEEECTTCSCCEEEEEEEETTEEEEEEEEEEEETTEEEEEE
T ss_pred CceEEEEEecccCCcccCCHHHHHHHHHHHHHHCCCeEEEEecCCCCchhhhhccccccCcccceeeeeccCCCceEEEe
Confidence 36899998832 34555678999999999999999999654321100 0000 00001135666555
Q ss_pred CCCCCCCCC-cccHH-HHHHHHHHhccHHHHHHHHHHhcCCCCCccEEEecCCCcc--HHHHHHHhCCccEEEcc
Q 040291 66 PDGMEPWED-RNDFG-KLFEKVLQVMPGKLEELIEDINSREDEKLDCFIADGYMAW--SMEVAKKMNVRGALFWP 136 (160)
Q Consensus 66 ~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~ll~~l~~~~~~~~d~vI~D~~~~~--~~~~A~~lgiP~i~~~~ 136 (160)
+...-.... ..... .+...+.... ..+..+++.+.... .+||+|.+...... +..++...|+|+|....
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~Dii~~~~~~~~~~~~~~~~~~~~~~v~~~h 153 (439)
T 3fro_A 81 GGGLLDSEDVYGPGWDGLIRKAVTFG-RASVLLLNDLLREE-PLPDVVHFHDWHTVFAGALIKKYFKIPAVFTIH 153 (439)
T ss_dssp ESGGGGCSSTTCSHHHHHHHHHHHHH-HHHHHHHHHHTTTS-CCCSEEEEESGGGHHHHHHHHHHHCCCEEEEES
T ss_pred cchhccccccccCCcchhhhhhHHHH-HHHHHHHHHHhccC-CCCeEEEecchhhhhhHHHHhhccCCCEEEEec
Confidence 431100000 01011 1112221111 12334444441111 58999997654332 34566788999988654
No 23
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=97.33 E-value=0.0017 Score=50.07 Aligned_cols=123 Identities=13% Similarity=0.112 Sum_probs=66.3
Q ss_pred CCeEEEEcC---C--------CCCChHHHHHHHHHHHhCCCEEEEEeCCCChhhHHhhhccCCCCCCCeeeeecCCCCCC
Q 040291 3 RPHVLVLPI---P--------AQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKRIMESLEGKNDLGEQIRLVSIPDGMEP 71 (160)
Q Consensus 3 ~~~i~~~~~---p--------~~GH~~P~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~ 71 (160)
.+||+++.. | ..|+-.....++++|.++||+|++++........... ....++++..++.....
T Consensus 20 mmkIl~i~~~~~p~~~~~~~~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~-----~~~~~v~v~~~~~~~~~ 94 (438)
T 3c48_A 20 HMRVAMISMHTSPLQQPGTGDSGGMNVYILSTATELAKQGIEVDIYTRATRPSQGEIV-----RVAENLRVINIAAGPYE 94 (438)
T ss_dssp CCEEEEECTTSCTTCC-------CHHHHHHHHHHHHHHTTCEEEEEEECCCGGGCSEE-----EEETTEEEEEECCSCSS
T ss_pred hheeeeEEeeccccccCCCCCCCCHHHHHHHHHHHHHhcCCEEEEEecCCCCCCcccc-----cccCCeEEEEecCCCcc
Confidence 579999984 2 3578889999999999999999999876432110000 00146777666532111
Q ss_pred CCCcccHHHHHHHHHHhccHHHHHHHHHHhcCCCCCccEEEecCCCc--cHHHHHHHhCCccEEEccch
Q 040291 72 WEDRNDFGKLFEKVLQVMPGKLEELIEDINSREDEKLDCFIADGYMA--WSMEVAKKMNVRGALFWPSS 138 (160)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~d~vI~D~~~~--~~~~~A~~lgiP~i~~~~~~ 138 (160)
..........+..+... .++..++. . .+||+|++..... .+..++..+|+|+|......
T Consensus 95 ~~~~~~~~~~~~~~~~~---~~~~~~~~---~--~~~Div~~~~~~~~~~~~~~~~~~~~p~v~~~h~~ 155 (438)
T 3c48_A 95 GLSKEELPTQLAAFTGG---MLSFTRRE---K--VTYDLIHSHYWLSGQVGWLLRDLWRIPLIHTAHTL 155 (438)
T ss_dssp SCCGGGGGGGHHHHHHH---HHHHHHHH---T--CCCSEEEEEHHHHHHHHHHHHHHHTCCEEEECSSC
T ss_pred ccchhHHHHHHHHHHHH---HHHHHHhc---c--CCCCEEEeCCccHHHHHHHHHHHcCCCEEEEecCC
Confidence 10111111111111111 11111222 1 2499998764322 23446778899998865544
No 24
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=97.25 E-value=0.00054 Score=51.28 Aligned_cols=42 Identities=19% Similarity=0.214 Sum_probs=33.4
Q ss_pred CCCCeEEEEcCC----------------CCCChHHHHHHHHHHHhCCCEEEEEeCCCC
Q 040291 1 MNRPHVLVLPIP----------------AQGHVIPLLEFSQCLAKQGFRVTFVNTDYD 42 (160)
Q Consensus 1 m~~~~i~~~~~p----------------~~GH~~P~l~la~~L~~rGh~Vt~~~~~~~ 42 (160)
|+++||+++... ..|.-.-...++++|.++||+|++++....
T Consensus 1 M~~mkIl~v~~~~~~~~~~~~~p~~p~~~gG~~~~~~~l~~~L~~~G~~v~v~~~~~~ 58 (342)
T 2iuy_A 1 MRPLKVALVNIPLRVPGSDAWISVPPQGYGGIQWVVANLMDGLLELGHEVFLLGAPGS 58 (342)
T ss_dssp --CCEEEEECCCCBCTTSSSBCCSSCSSSCHHHHHHHHHHHHHHHTTCEEEEESCTTS
T ss_pred CCccEEEEEeccccccCcccccccCcccCChHHHHHHHHHHHHHHcCCeEEEEecCCC
Confidence 888999998855 256667889999999999999999987643
No 25
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=97.22 E-value=0.0025 Score=50.25 Aligned_cols=127 Identities=14% Similarity=0.150 Sum_probs=67.7
Q ss_pred CCeEEEEcCC---------------CCCChHHHHHHHHHHHhCCCEEEEEeCCCChhhHHhhhccC-CC--CCCCeeeee
Q 040291 3 RPHVLVLPIP---------------AQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKRIMESLEGK-ND--LGEQIRLVS 64 (160)
Q Consensus 3 ~~~i~~~~~p---------------~~GH~~P~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~-~~--~~~~i~~~~ 64 (160)
++||+++..- ..|.-.....++++|+++||+|++++......... .+... .. ...++++..
T Consensus 7 ~MkIl~i~~~~~P~~~~l~v~~~~~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~-~~~~~~~~~~~~~gv~v~~ 85 (499)
T 2r60_A 7 IKHVAFLNPQGNFDPADSYWTEHPDFGGQLVYVKEVSLALAEMGVQVDIITRRIKDENWP-EFSGEIDYYQETNKVRIVR 85 (499)
T ss_dssp CCEEEEECCSSCCCTTCTTTTSBTTBSHHHHHHHHHHHHHHHTTCEEEEEEECCCBTTBG-GGCCSEEECTTCSSEEEEE
T ss_pred cceEEEEecCCCccccccccCCCCCCCCeeehHHHHHHHHHhcCCeEEEEeCCCCccccc-chhhhHHhccCCCCeEEEE
Confidence 3799998842 35667889999999999999999998754321100 00000 00 024777777
Q ss_pred cCCCCCCCCCcccHHHHHHHHHHhccHHHHHHHHHHhcCCCCCccEEEecCCCc--cHHHHHHHhCCccEEEccch
Q 040291 65 IPDGMEPWEDRNDFGKLFEKVLQVMPGKLEELIEDINSREDEKLDCFIADGYMA--WSMEVAKKMNVRGALFWPSS 138 (160)
Q Consensus 65 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~d~vI~D~~~~--~~~~~A~~lgiP~i~~~~~~ 138 (160)
++..................+. ..+..++++. . .++|+|.+..... .+..++..+|+|+|......
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~----~~l~~~l~~~---~-~~~Divh~~~~~~~~~~~~~~~~~~~p~v~~~H~~ 153 (499)
T 2r60_A 86 IPFGGDKFLPKEELWPYLHEYV----NKIINFYREE---G-KFPQVVTTHYGDGGLAGVLLKNIKGLPFTFTGHSL 153 (499)
T ss_dssp ECCSCSSCCCGGGCGGGHHHHH----HHHHHHHHHH---T-CCCSEEEEEHHHHHHHHHHHHHHHCCCEEEECSSC
T ss_pred ecCCCcCCcCHHHHHHHHHHHH----HHHHHHHHhc---C-CCCCEEEEcCCcchHHHHHHHHhcCCcEEEEccCc
Confidence 6632111101111111111111 1223334331 0 3799998654322 13446778899998765543
No 26
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=97.07 E-value=0.0032 Score=47.63 Aligned_cols=107 Identities=11% Similarity=0.110 Sum_probs=64.2
Q ss_pred CCCCeEEEEcC--C--CCCChHHHHHHHHHHHhCCCEEEEEeCCCChhhHHhhhccCCCCCCCeeeeecCCCCCCCCCcc
Q 040291 1 MNRPHVLVLPI--P--AQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKRIMESLEGKNDLGEQIRLVSIPDGMEPWEDRN 76 (160)
Q Consensus 1 m~~~~i~~~~~--p--~~GH~~P~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~~ 76 (160)
|+++||++++. + ..|.-.-+..++++| +||+|++++.......... .. ...++.+..++..... .
T Consensus 2 ~~~mkIl~v~~~~~p~~gG~~~~~~~l~~~L--~g~~v~v~~~~~~~~~~~~-~~----~~~~~~~~~~~~~~~~----~ 70 (394)
T 3okp_A 2 SASRKTLVVTNDFPPRIGGIQSYLRDFIATQ--DPESIVVFASTQNAEEAHA-YD----KTLDYEVIRWPRSVML----P 70 (394)
T ss_dssp --CCCEEEEESCCTTSCSHHHHHHHHHHTTS--CGGGEEEEEECSSHHHHHH-HH----TTCSSEEEEESSSSCC----S
T ss_pred CCCceEEEEeCccCCccchHHHHHHHHHHHh--cCCeEEEEECCCCccchhh-hc----cccceEEEEccccccc----c
Confidence 56789999874 3 457778899999999 7999999998766431111 10 1246666665532110 0
Q ss_pred cHHHHHHHHHHhccHHHHHHHHHHhcCCCCCccEEEecCCCc--cHHHHHHHhCCccEE
Q 040291 77 DFGKLFEKVLQVMPGKLEELIEDINSREDEKLDCFIADGYMA--WSMEVAKKMNVRGAL 133 (160)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~d~vI~D~~~~--~~~~~A~~lgiP~i~ 133 (160)
.. .. ...+.+++++ .++|+|+...... +...++.++|+|.++
T Consensus 71 ~~-~~--------~~~l~~~~~~------~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~i 114 (394)
T 3okp_A 71 TP-TT--------AHAMAEIIRE------REIDNVWFGAAAPLALMAGTAKQAGASKVI 114 (394)
T ss_dssp CH-HH--------HHHHHHHHHH------TTCSEEEESSCTTGGGGHHHHHHTTCSEEE
T ss_pred ch-hh--------HHHHHHHHHh------cCCCEEEECCcchHHHHHHHHHhcCCCcEE
Confidence 11 00 0123445554 5899999755443 346678999998444
No 27
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=96.38 E-value=0.048 Score=41.06 Aligned_cols=112 Identities=10% Similarity=0.060 Sum_probs=58.5
Q ss_pred CeEEEEcCCCCCChHHHHHHHHHHHhC-CCEEEEEeCCCChhhHHhhhccCCCCCCCeee-eecCCCCCCCCCcccHHHH
Q 040291 4 PHVLVLPIPAQGHVIPLLEFSQCLAKQ-GFRVTFVNTDYDHKRIMESLEGKNDLGEQIRL-VSIPDGMEPWEDRNDFGKL 81 (160)
Q Consensus 4 ~~i~~~~~p~~GH~~P~l~la~~L~~r-Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~l~~~~~~~~~~~~~~~~ 81 (160)
+||+++... .+.......++++|.++ ||+|.++.+............ ..++.+ ..++.. . ........
T Consensus 6 mkIl~v~~~-~~~~~~~~~l~~~L~~~~g~~v~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~--~--~~~~~~~~ 75 (376)
T 1v4v_A 6 KRVVLAFGT-RPEATKMAPVYLALRGIPGLKPLVLLTGQHREQLRQALS-----LFGIQEDRNLDVM--Q--ERQALPDL 75 (376)
T ss_dssp EEEEEEECS-HHHHHHHHHHHHHHHTSTTEEEEEEECSSCHHHHHHHHH-----TTTCCCSEECCCC--S--SCCCHHHH
T ss_pred eEEEEEEec-cHHHHHHHHHHHHHHhCCCCceEEEEcCCcHHHHHHHHH-----HcCCCcccccccC--C--CCccHHHH
Confidence 689888743 33345567889999998 899888776543322111110 013322 122211 1 11112111
Q ss_pred HHHHHHhccHHHHHHHHHHhcCCCCCccEEEe--cCCCcc-HHHHHHHhCCccEEEc
Q 040291 82 FEKVLQVMPGKLEELIEDINSREDEKLDCFIA--DGYMAW-SMEVAKKMNVRGALFW 135 (160)
Q Consensus 82 ~~~~~~~~~~~~~~ll~~l~~~~~~~~d~vI~--D~~~~~-~~~~A~~lgiP~i~~~ 135 (160)
.... . ..+.+++++ .+||+|+. +....+ +..+|..+|||++...
T Consensus 76 ~~~~---~-~~l~~~l~~------~~pDvv~~~~~~~~~~~~~~~a~~~~ip~v~~~ 122 (376)
T 1v4v_A 76 AARI---L-PQAARALKE------MGADYVLVHGDTLTTFAVAWAAFLEGIPVGHVE 122 (376)
T ss_dssp HHHH---H-HHHHHHHHH------TTCSEEEEESSCHHHHHHHHHHHHTTCCEEEET
T ss_pred HHHH---H-HHHHHHHHH------cCCCEEEEeCChHHHHHHHHHHHHhCCCEEEEe
Confidence 1111 1 124445554 68999997 322333 3567888999988654
No 28
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=96.25 E-value=0.048 Score=41.31 Aligned_cols=113 Identities=15% Similarity=0.212 Sum_probs=60.8
Q ss_pred CCeEEEEcCCCC-CChHHHHHHHHHHHhCCCEEEEEeCCCChhhHHhhhccCCCCCCCeeeeecCCC-CCCCCCcccHHH
Q 040291 3 RPHVLVLPIPAQ-GHVIPLLEFSQCLAKQGFRVTFVNTDYDHKRIMESLEGKNDLGEQIRLVSIPDG-MEPWEDRNDFGK 80 (160)
Q Consensus 3 ~~~i~~~~~p~~-GH~~P~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~-~~~~~~~~~~~~ 80 (160)
++++....+|.. |.-.-...|+++|+++||+|++++...... ... ...++.+..++.. .+.. . .....
T Consensus 15 ~~~~~~~~~p~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~-~~~-------~~~~i~~~~~~~~~~~~~-~-~~~~~ 84 (394)
T 2jjm_A 15 KLKIGITCYPSVGGSGVVGTELGKQLAERGHEIHFITSGLPFR-LNK-------VYPNIYFHEVTVNQYSVF-Q-YPPYD 84 (394)
T ss_dssp CCEEEEECCC--CHHHHHHHHHHHHHHHTTCEEEEECSSCC-----C-------CCTTEEEECCCCC----C-C-SCCHH
T ss_pred eeeeehhcCCCCCCHHHHHHHHHHHHHhCCCEEEEEeCCCCCc-ccc-------cCCceEEEeccccccccc-c-ccccc
Confidence 456777777654 566788899999999999999998854321 111 1246666554321 0000 0 00111
Q ss_pred HHHHHHHhccHHHHHHHHHHhcCCCCCccEEEecCCCcc--HHHHHHHh---CCccEEEccc
Q 040291 81 LFEKVLQVMPGKLEELIEDINSREDEKLDCFIADGYMAW--SMEVAKKM---NVRGALFWPS 137 (160)
Q Consensus 81 ~~~~~~~~~~~~~~~ll~~l~~~~~~~~d~vI~D~~~~~--~~~~A~~l---giP~i~~~~~ 137 (160)
+ . . ...+.+++++ .+||+|+....... ...++.++ ++|++.....
T Consensus 85 ~-~-~----~~~l~~~l~~------~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~ 134 (394)
T 2jjm_A 85 L-A-L----ASKMAEVAQR------ENLDILHVHYAIPHAICAYLAKQMIGERIKIVTTLHG 134 (394)
T ss_dssp H-H-H----HHHHHHHHHH------HTCSEEEECSSTTHHHHHHHHHHHTTTCSEEEEECCH
T ss_pred H-H-H----HHHHHHHHHH------cCCCEEEEcchhHHHHHHHHHHHhhcCCCCEEEEEec
Confidence 0 0 0 1123344444 47999997654332 33445544 5998876554
No 29
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=96.22 E-value=0.033 Score=42.14 Aligned_cols=41 Identities=15% Similarity=0.216 Sum_probs=32.3
Q ss_pred CCeEEEEcC---CC-CCChHHHHHHHHHHHhCCCEEEEEeCCCCh
Q 040291 3 RPHVLVLPI---PA-QGHVIPLLEFSQCLAKQGFRVTFVNTDYDH 43 (160)
Q Consensus 3 ~~~i~~~~~---p~-~GH~~P~l~la~~L~~rGh~Vt~~~~~~~~ 43 (160)
++||+++.. +. .|.-.-...++++|.++||+|++++.....
T Consensus 20 ~MkIl~i~~~~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~ 64 (406)
T 2gek_A 20 HMRIGMVCPYSFDVPGGVQSHVLQLAEVLRDAGHEVSVLAPASPH 64 (406)
T ss_dssp -CEEEEECSSCTTSCCHHHHHHHHHHHHHHHTTCEEEEEESCCTT
T ss_pred cceEEEEeccCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCcc
Confidence 578998873 22 466688999999999999999999987543
No 30
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=96.18 E-value=0.024 Score=43.76 Aligned_cols=115 Identities=11% Similarity=0.095 Sum_probs=61.4
Q ss_pred CCCCeEEEEcCCCCCChHHHHHHHHHHHhC-CCEEEEEeCCCChhhHHhhhccCCCCCCCeee-eecCCCCCCCCCcccH
Q 040291 1 MNRPHVLVLPIPAQGHVIPLLEFSQCLAKQ-GFRVTFVNTDYDHKRIMESLEGKNDLGEQIRL-VSIPDGMEPWEDRNDF 78 (160)
Q Consensus 1 m~~~~i~~~~~p~~GH~~P~l~la~~L~~r-Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~l~~~~~~~~~~~~~ 78 (160)
|++++|+++. +......=+.+|.++|.++ |+++.++.+....+....... .-+++. ..+. .... ....
T Consensus 23 ~~m~ki~~v~-Gtr~~~~~~a~li~~l~~~~~~~~~~~~tG~h~~~~~~~~~-----~~~i~~~~~l~--~~~~--~~~~ 92 (396)
T 3dzc_A 23 NAMKKVLIVF-GTRPEAIKMAPLVQQLCQDNRFVAKVCVTGQHREMLDQVLE-----LFSITPDFDLN--IMEP--GQTL 92 (396)
T ss_dssp -CCEEEEEEE-CSHHHHHHHHHHHHHHHHCTTEEEEEEECCSSSHHHHHHHH-----HTTCCCSEECC--CCCT--TCCH
T ss_pred CCCCeEEEEE-eccHhHHHHHHHHHHHHhCCCCcEEEEEecccHHHHHHHHH-----hcCCCCceeee--cCCC--CCCH
Confidence 4556888777 6666778889999999987 799987666544321111000 012210 0111 1000 1122
Q ss_pred HHHHHHHHHhccHHHHHHHHHHhcCCCCCccEEEe-c-CCCccH-HHHHHHhCCccEEEc
Q 040291 79 GKLFEKVLQVMPGKLEELIEDINSREDEKLDCFIA-D-GYMAWS-MEVAKKMNVRGALFW 135 (160)
Q Consensus 79 ~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~d~vI~-D-~~~~~~-~~~A~~lgiP~i~~~ 135 (160)
... +...+ ..+.+++++ .+||+|+. + ....++ ...|.++|||.+.+.
T Consensus 93 ~~~---~~~~~-~~l~~~l~~------~kPDvVi~~g~~~~~~~~~~aa~~~~IPv~h~~ 142 (396)
T 3dzc_A 93 NGV---TSKIL-LGMQQVLSS------EQPDVVLVHGDTATTFAASLAAYYQQIPVGHVE 142 (396)
T ss_dssp HHH---HHHHH-HHHHHHHHH------HCCSEEEEETTSHHHHHHHHHHHTTTCCEEEET
T ss_pred HHH---HHHHH-HHHHHHHHh------cCCCEEEEECCchhHHHHHHHHHHhCCCEEEEE
Confidence 111 11111 235556655 58999884 3 333343 567889999988764
No 31
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=96.15 E-value=0.018 Score=44.64 Aligned_cols=112 Identities=15% Similarity=0.186 Sum_probs=59.7
Q ss_pred CCCCeEEEEcCCCCCChHHHHHHHHHHHhC--CCEEEEEeCCCCh---hhHHhhhccCCCCCCCeee-eecCCCCCCCCC
Q 040291 1 MNRPHVLVLPIPAQGHVIPLLEFSQCLAKQ--GFRVTFVNTDYDH---KRIMESLEGKNDLGEQIRL-VSIPDGMEPWED 74 (160)
Q Consensus 1 m~~~~i~~~~~p~~GH~~P~l~la~~L~~r--Gh~Vt~~~~~~~~---~~~~~~~~~~~~~~~~i~~-~~l~~~~~~~~~ 74 (160)
|++++|+++. +....+.=+.+|.++|.++ |+++.++.+.... +..... -+++. ..+. ... .
T Consensus 25 m~~~kI~~v~-Gtr~~~~~~a~li~~l~~~~~~~~~~~~~tG~h~~m~~~~~~~--------~~i~~~~~l~--v~~--~ 91 (403)
T 3ot5_A 25 MAKIKVMSIF-GTRPEAIKMAPLVLALEKEPETFESTVVITAQHREMLDQVLEI--------FDIKPDIDLD--IMK--K 91 (403)
T ss_dssp -CCEEEEEEE-CSHHHHHHHHHHHHHHHTCTTTEEEEEEECC-----CHHHHHH--------TTCCCSEECC--CCC---
T ss_pred cccceEEEEE-ecChhHHHHHHHHHHHHhCCCCCcEEEEEecCcHHHHHHHHHh--------cCCCCCcccc--cCC--C
Confidence 5556888887 5555677778999999988 6898876665331 111111 12210 1111 100 0
Q ss_pred cccHHHHHHHHHHhccHHHHHHHHHHhcCCCCCccEEEe-cC-CCcc-HHHHHHHhCCccEEEc
Q 040291 75 RNDFGKLFEKVLQVMPGKLEELIEDINSREDEKLDCFIA-DG-YMAW-SMEVAKKMNVRGALFW 135 (160)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~d~vI~-D~-~~~~-~~~~A~~lgiP~i~~~ 135 (160)
....... +...+ ..+.+++++ .+||+|+. +. ...+ +...|.++|||.+.+.
T Consensus 92 ~~~~~~~---~~~~~-~~l~~~l~~------~kPD~Vi~~gd~~~~l~~~laA~~~~IPv~h~~ 145 (403)
T 3ot5_A 92 GQTLAEI---TSRVM-NGINEVIAA------ENPDIVLVHGDTTTSFAAGLATFYQQKMLGHVE 145 (403)
T ss_dssp CCCHHHH---HHHHH-HHHHHHHHH------HCCSEEEEETTCHHHHHHHHHHHHTTCEEEEES
T ss_pred CCCHHHH---HHHHH-HHHHHHHHH------cCCCEEEEECCchhHHHHHHHHHHhCCCEEEEE
Confidence 1122211 11111 235556665 58999884 33 3334 4568899999988764
No 32
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=95.88 E-value=0.057 Score=40.36 Aligned_cols=38 Identities=16% Similarity=0.230 Sum_probs=30.3
Q ss_pred CeEEEEc---CCCCCChHHHHHHHHHHHhCCCEEEEEeCCC
Q 040291 4 PHVLVLP---IPAQGHVIPLLEFSQCLAKQGFRVTFVNTDY 41 (160)
Q Consensus 4 ~~i~~~~---~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~ 41 (160)
+||+++. .|..|.-.-...++++|+++||+|++++...
T Consensus 1 MkIl~i~~~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~ 41 (374)
T 2iw1_A 1 MIVAFCLYKYFPFGGLQRDFMRIASTVAARGHHVRVYTQSW 41 (374)
T ss_dssp -CEEEECSEECTTCHHHHHHHHHHHHHHHTTCCEEEEESEE
T ss_pred CeEEEEEeecCCCcchhhHHHHHHHHHHhCCCeEEEEecCC
Confidence 3677774 2456777889999999999999999998763
No 33
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=95.85 E-value=0.15 Score=38.19 Aligned_cols=40 Identities=15% Similarity=0.130 Sum_probs=30.8
Q ss_pred CCCeEEEEcCCCCCChHHHHHHHHHHHhC-C-CEEEEEeCCCC
Q 040291 2 NRPHVLVLPIPAQGHVIPLLEFSQCLAKQ-G-FRVTFVNTDYD 42 (160)
Q Consensus 2 ~~~~i~~~~~p~~GH~~P~l~la~~L~~r-G-h~Vt~~~~~~~ 42 (160)
+++||+++. ...++......++++|.++ | |+|.++++...
T Consensus 7 ~~mkIl~v~-~~~~~~~~~~~l~~~L~~~~~~~~v~~~~~~~~ 48 (375)
T 3beo_A 7 ERLKVMTIF-GTRPEAIKMAPLVLELQKHPEKIESIVTVTAQH 48 (375)
T ss_dssp SCEEEEEEE-CSHHHHHHHHHHHHHHTTCTTTEEEEEEECCSS
T ss_pred cCceEEEEe-cCcHHHHHHHHHHHHHHhCCCCCCeEEEEcCCC
Confidence 357999887 3467778888999999987 5 88887776543
No 34
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=95.70 E-value=0.051 Score=40.91 Aligned_cols=110 Identities=13% Similarity=0.102 Sum_probs=58.8
Q ss_pred CeEEEEcCCCCCChHHHHHHHHHHHhCCC-EEEEEeCCCChh---hHHhhhccCCCCCCCeee-eecCCCCCCCCCcccH
Q 040291 4 PHVLVLPIPAQGHVIPLLEFSQCLAKQGF-RVTFVNTDYDHK---RIMESLEGKNDLGEQIRL-VSIPDGMEPWEDRNDF 78 (160)
Q Consensus 4 ~~i~~~~~p~~GH~~P~l~la~~L~~rGh-~Vt~~~~~~~~~---~~~~~~~~~~~~~~~i~~-~~l~~~~~~~~~~~~~ 78 (160)
+||++++. ..++...+.+|+++|.++|+ ++.++.+..... ...+. .++.+ ..++.. . .....
T Consensus 1 mkIl~v~~-~~~~~~~~~~l~~~L~~~g~~~~~v~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~--~--~~~~~ 67 (384)
T 1vgv_A 1 MKVLTVFG-TRPEAIKMAPLVHALAKDPFFEAKVCVTAQHREMLDQVLKL--------FSIVPDYDLNIM--Q--PGQGL 67 (384)
T ss_dssp CEEEEEEC-SHHHHHHHHHHHHHHHHSTTCEEEEEECCSSGGGGHHHHHH--------HTCCCSEECCCC--S--TTSCH
T ss_pred CeEEEEec-ccHHHHHHHHHHHHHHhCCCCceEEEEcCCCHHHHHHHHHH--------cCCCCCcceecC--C--CCccH
Confidence 47888763 35677888999999999994 887765533221 11111 12322 222211 1 01122
Q ss_pred HHHHHHHHHhccHHHHHHHHHHhcCCCCCccEEEecC--CCcc-HHHHHHHhCCccEEEcc
Q 040291 79 GKLFEKVLQVMPGKLEELIEDINSREDEKLDCFIADG--YMAW-SMEVAKKMNVRGALFWP 136 (160)
Q Consensus 79 ~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~d~vI~D~--~~~~-~~~~A~~lgiP~i~~~~ 136 (160)
... .... ...+.+++++ .+||+|+.-. ...+ +..+|...|+|++....
T Consensus 68 ~~~---~~~~-~~~l~~~l~~------~~pDvv~~~~~~~~~~~~~~~a~~~~ip~v~~~~ 118 (384)
T 1vgv_A 68 TEI---TCRI-LEGLKPILAE------FKPDVVLVHGDTTTTLATSLAAFYQRIPVGHVEA 118 (384)
T ss_dssp HHH---HHHH-HHHHHHHHHH------HCCSEEEEETTCHHHHHHHHHHHTTTCCEEEESC
T ss_pred HHH---HHHH-HHHHHHHHHH------hCCCEEEEeCCchHHHHHHHHHHHHCCCEEEEec
Confidence 211 1111 1234455555 5899999632 2233 34567788999987654
No 35
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=95.22 E-value=0.035 Score=42.45 Aligned_cols=42 Identities=10% Similarity=0.078 Sum_probs=34.3
Q ss_pred CCCCeEEEEcCC--CCCChHHHHHHHHHHHhCCCEEEEEeCCCC
Q 040291 1 MNRPHVLVLPIP--AQGHVIPLLEFSQCLAKQGFRVTFVNTDYD 42 (160)
Q Consensus 1 m~~~~i~~~~~p--~~GH~~P~l~la~~L~~rGh~Vt~~~~~~~ 42 (160)
|.++||+++... ..|+-.....++++|.++||+|++++....
T Consensus 38 ~~~mkIl~v~~~~~~GG~~~~~~~l~~~L~~~G~~v~v~~~~~~ 81 (416)
T 2x6q_A 38 LKGRSFVHVNSTSFGGGVAEILHSLVPLLRSIGIEARWFVIEGP 81 (416)
T ss_dssp TTTCEEEEEESCSSSSTHHHHHHHHHHHHHHTTCEEEEEECCCC
T ss_pred hhccEEEEEeCCCCCCCHHHHHHHHHHHHHhCCCeEEEEEccCC
Confidence 667899877643 357788899999999999999999887654
No 36
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=94.77 E-value=0.07 Score=34.99 Aligned_cols=45 Identities=13% Similarity=0.212 Sum_probs=39.4
Q ss_pred CCCCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCCCChhh
Q 040291 1 MNRPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKR 45 (160)
Q Consensus 1 m~~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~~~~~ 45 (160)
|++++|++.+.++-+|-....-++..|..+|++|..+...-..+.
T Consensus 1 ~~~~~vvla~~~~d~HdiG~~~v~~~l~~~G~~Vi~lG~~~p~e~ 45 (137)
T 1ccw_A 1 MEKKTIVLGVIGSDCHAVGNKILDHAFTNAGFNVVNIGVLSPQEL 45 (137)
T ss_dssp CCCCEEEEEEETTCCCCHHHHHHHHHHHHTTCEEEEEEEEECHHH
T ss_pred CCCCEEEEEeCCCchhHHHHHHHHHHHHHCCCEEEECCCCCCHHH
Confidence 888999999999999999999999999999999998876544433
No 37
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=94.19 E-value=0.51 Score=35.06 Aligned_cols=102 Identities=10% Similarity=0.029 Sum_probs=64.7
Q ss_pred CeEEEEcCCCCCChHHHHHHHHHHHhC--CCEEEEEeCCCChhhHHhhhccCCCCCCCee-eeecCCCCCCCCCcccHHH
Q 040291 4 PHVLVLPIPAQGHVIPLLEFSQCLAKQ--GFRVTFVNTDYDHKRIMESLEGKNDLGEQIR-LVSIPDGMEPWEDRNDFGK 80 (160)
Q Consensus 4 ~~i~~~~~p~~GH~~P~l~la~~L~~r--Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~-~~~l~~~~~~~~~~~~~~~ 80 (160)
+||+++...+.|++.-..++.++|.++ |.+|++++.+...+.+.. .+.++ ++.++. ... ....
T Consensus 1 mkILii~~~~~GD~i~~~p~l~~Lk~~~P~~~i~~l~~~~~~~l~~~--------~p~i~~v~~~~~--~~~--~~~~-- 66 (348)
T 1psw_A 1 MKILVIGPSWVGDMMMSQSLYRTLQARYPQAIIDVMAPAWCRPLLSR--------MPEVNEAIPMPL--GHG--ALEI-- 66 (348)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHHSTTCEEEEEECGGGHHHHTT--------CTTEEEEEEC-----------CH--
T ss_pred CeEEEEeccccCHHHHHHHHHHHHHHHCCCCEEEEEECcchhHHHhc--------CCccCEEEEecC--Ccc--ccch--
Confidence 489999988889999999999999987 999999999866554322 24453 333321 000 0000
Q ss_pred HHHHHHHhccHHHHHHHHHHhcCCCCCccEEEecCCC-ccHHHHHHHhCCccEE
Q 040291 81 LFEKVLQVMPGKLEELIEDINSREDEKLDCFIADGYM-AWSMEVAKKMNVRGAL 133 (160)
Q Consensus 81 ~~~~~~~~~~~~~~~ll~~l~~~~~~~~d~vI~D~~~-~~~~~~A~~lgiP~i~ 133 (160)
..+.++.+.+.+ .+||++| |... .-...++...|+|...
T Consensus 67 ----------~~~~~l~~~l~~---~~~D~vi-d~~~~~~sa~~~~~~~~~~~i 106 (348)
T 1psw_A 67 ----------GERRKLGHSLRE---KRYDRAY-VLPNSFKSALVPLFAGIPHRT 106 (348)
T ss_dssp ----------HHHHHHHHHTTT---TTCSEEE-ECSCCSGGGHHHHHTTCSEEE
T ss_pred ----------HHHHHHHHHHHh---cCCCEEE-ECCCChHHHHHHHHhCCCEEe
Confidence 123345555543 5899988 4433 2345677778898743
No 38
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=93.89 E-value=0.046 Score=42.37 Aligned_cols=39 Identities=15% Similarity=0.219 Sum_probs=30.0
Q ss_pred CCeEEEEcCCCC-----CChHHHHHHHHHHHhCCCEEEEEeCCC
Q 040291 3 RPHVLVLPIPAQ-----GHVIPLLEFSQCLAKQGFRVTFVNTDY 41 (160)
Q Consensus 3 ~~~i~~~~~p~~-----GH~~P~l~la~~L~~rGh~Vt~~~~~~ 41 (160)
++||+++..... |=.....+++++|+++||+|++++...
T Consensus 46 ~mrI~~v~~~~~p~~~~GG~~~v~~la~~L~~~GheV~Vvt~~~ 89 (413)
T 2x0d_A 46 GKRLNLLVPSINQEHMFGGISTALKLFEQFDNKKFKKRIILTDA 89 (413)
T ss_dssp SCEEEEEESCCCGGGCSHHHHHHHHHHTTSCTTTCEEEEEESSC
T ss_pred CceEEEEeCCCCccccccHHHHHHHHHHHHHHcCCceEEEEecC
Confidence 578887773322 333568899999999999999999864
No 39
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=93.35 E-value=0.047 Score=43.91 Aligned_cols=38 Identities=21% Similarity=0.303 Sum_probs=28.3
Q ss_pred CCeEEEEcC---CC--CCCh-HHHHHHHHHHHhCCCEEEEEeCC
Q 040291 3 RPHVLVLPI---PA--QGHV-IPLLEFSQCLAKQGFRVTFVNTD 40 (160)
Q Consensus 3 ~~~i~~~~~---p~--~GH~-~P~l~la~~L~~rGh~Vt~~~~~ 40 (160)
++||+++++ |. .|=+ .-.-.|.++|+++||+|+++++.
T Consensus 9 ~MkIl~vs~E~~P~~K~GGLadvv~~L~~aL~~~G~~V~Vi~P~ 52 (536)
T 3vue_A 9 HMNVVFVGAEMAPWSKTGGLGDVLGGLPPAMAANGHRVMVISPR 52 (536)
T ss_dssp CCEEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTTCEEEEEEEC
T ss_pred CcEEEEEEEeccchhccCcHHHHHHHHHHHHHHcCCeEEEEecC
Confidence 689999962 32 1222 34678999999999999999864
No 40
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=92.91 E-value=1.1 Score=34.35 Aligned_cols=36 Identities=25% Similarity=0.312 Sum_probs=25.1
Q ss_pred CCeEEEEc---CCCCCChHHHHHHHHHHHhCCCEEEEEeCC
Q 040291 3 RPHVLVLP---IPAQGHVIPLLEFSQCLAKQGFRVTFVNTD 40 (160)
Q Consensus 3 ~~~i~~~~---~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~ 40 (160)
++||++++ +| .+.-.-...+++.|+++| +|++++..
T Consensus 14 ~MkIl~is~~~~p-~~~~~~~~~l~~~l~~~G-~V~vi~~~ 52 (406)
T 2hy7_A 14 RPCYLVLSSHDFR-TPRRANIHFITDQLALRG-TTRFFSLR 52 (406)
T ss_dssp CSCEEEEESSCTT-SSSCCHHHHHHHHHHHHS-CEEEEECS
T ss_pred CceEEEEecccCC-ChhhhhHhHHHHHHHhCC-ceEEEEec
Confidence 57899887 44 232223456788999999 99999543
No 41
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=92.69 E-value=0.15 Score=37.70 Aligned_cols=91 Identities=21% Similarity=0.220 Sum_probs=53.1
Q ss_pred eEEEEc----CCCCCChHHHHHHHHHHHhCCCEEEEEeCCCChhhHHhhhccCCCCCCCeeeeecCCCCCCCCCcccHHH
Q 040291 5 HVLVLP----IPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKRIMESLEGKNDLGEQIRLVSIPDGMEPWEDRNDFGK 80 (160)
Q Consensus 5 ~i~~~~----~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~ 80 (160)
+|+|.. .-|.||+.=.+.||++|. +|+|++.......+.. -++.+..++. .+..
T Consensus 2 ki~ir~Da~~~IG~GHvmRcl~LA~~l~----~v~F~~~~~~~~~~~~---------~g~~v~~l~~--------~d~~- 59 (282)
T 3hbm_A 2 KVLFRSDSSSQIGFGHIKRDLVLAKQYS----DVSFACLPLEGSLIDE---------IPYPVYELSS--------ESIY- 59 (282)
T ss_dssp CEEEEECCBTTTBSHHHHHHHHHHTTCS----SEEEEECCCTTCCGGG---------CCSCEEECSS--------SCHH-
T ss_pred EEEEEEecCCCccccHHHHHHHHHHHHH----hCEEEEecCcHhHHHH---------CCCeEEEcCc--------cCHH-
Confidence 455554 345799999999999999 7999886543322221 2444444431 1111
Q ss_pred HHHHHHHhccHHHHHHHHHHhcCCCCCccEEEecCCCccH---HHHHHHhCCccEEE
Q 040291 81 LFEKVLQVMPGKLEELIEDINSREDEKLDCFIADGYMAWS---MEVAKKMNVRGALF 134 (160)
Q Consensus 81 ~~~~~~~~~~~~~~~ll~~l~~~~~~~~d~vI~D~~~~~~---~~~A~~lgiP~i~~ 134 (160)
.+.+++++ .++|++|.|...... ..+.+..+++.+++
T Consensus 60 -----------~~~~~l~~------~~~d~lIvD~Y~~~~~~~~~lk~~~~~~i~~i 99 (282)
T 3hbm_A 60 -----------ELINLIKE------EKFELLIIDHYGISVDDEKLIKLETGVKILSF 99 (282)
T ss_dssp -----------HHHHHHHH------HTCSEEEEECTTCCHHHHHHHHHHHCCEEEEE
T ss_pred -----------HHHHHHHh------CCCCEEEEECCCCCHHHHHHHHHhcCcEEEEE
Confidence 12233333 367999999866433 23444457777665
No 42
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=92.60 E-value=0.2 Score=42.47 Aligned_cols=108 Identities=17% Similarity=0.178 Sum_probs=53.3
Q ss_pred HHHHHHHhCCCEEE----EEeCCCChhhHHhhhccC---CCCCCCeeeeecCCCCCC-----CCCcccHHHHHHHHHHhc
Q 040291 22 EFSQCLAKQGFRVT----FVNTDYDHKRIMESLEGK---NDLGEQIRLVSIPDGMEP-----WEDRNDFGKLFEKVLQVM 89 (160)
Q Consensus 22 ~la~~L~~rGh~Vt----~~~~~~~~~~~~~~~~~~---~~~~~~i~~~~l~~~~~~-----~~~~~~~~~~~~~~~~~~ 89 (160)
+|+++|+++||+|| ++|...... ....+... ....+++++..+|.+... .-....++..+..+.
T Consensus 318 ela~~L~~~G~~V~~~V~v~Tr~~~~~-~g~~y~~~~e~i~~~~gv~I~RvP~~~~~g~l~~~l~k~~L~~~L~~F~--- 393 (816)
T 3s28_A 318 EMLQRIKQQGLNIKPRILILTRLLPDA-VGTTCGERLERVYDSEYCDILRVPFRTEKGIVRKWISRFEVWPYLETYT--- 393 (816)
T ss_dssp HHHHHHHHTTCCCCCEEEEEEECCTTC-TTSSTTSSEEECTTCSSEEEEEECEEETTEEECSCCCTTTCGGGHHHHH---
T ss_pred HHHHHHHHCCCccceeeEEEeCCCCCC-CCCccCCcceeecCcCCeEEEEecCCCccccccccccHHHHHHHHHHHH---
Confidence 58888899999997 666543221 10001000 011146777766632111 001112222222222
Q ss_pred cHHHHHHHHHHhcCCCCCccEEEecCCC-c-cHHHHHHHhCCccEEEccc
Q 040291 90 PGKLEELIEDINSREDEKLDCFIADGYM-A-WSMEVAKKMNVRGALFWPS 137 (160)
Q Consensus 90 ~~~~~~ll~~l~~~~~~~~d~vI~D~~~-~-~~~~~A~~lgiP~i~~~~~ 137 (160)
...+..+++.. ..+||+|.+-... . .+..+++++|||.|...-+
T Consensus 394 ~~~l~~il~~~----~~~PDVIHsH~~~sglva~llar~~gvP~V~T~Hs 439 (816)
T 3s28_A 394 EDAAVELSKEL----NGKPDLIIGNYSDGNLVASLLAHKLGVTQCTIAHA 439 (816)
T ss_dssp HHHHHHHHHHC----SSCCSEEEEEHHHHHHHHHHHHHHHTCCEEEECSC
T ss_pred HHHHHHHHHhc----CCCCeEEEeCCchHHHHHHHHHHHcCCCEEEEEec
Confidence 11233334331 1479999865322 1 2456889999999886544
No 43
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=92.31 E-value=1.1 Score=33.65 Aligned_cols=105 Identities=18% Similarity=0.150 Sum_probs=68.5
Q ss_pred CCCeEEEEcCCCCCChHHHHHHHHHHHhC--CCEEEEEeCCCChhhHHhhhccCCCCCCCee-eeecCCCCCCCCCcccH
Q 040291 2 NRPHVLVLPIPAQGHVIPLLEFSQCLAKQ--GFRVTFVNTDYDHKRIMESLEGKNDLGEQIR-LVSIPDGMEPWEDRNDF 78 (160)
Q Consensus 2 ~~~~i~~~~~p~~GH~~P~l~la~~L~~r--Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~-~~~l~~~~~~~~~~~~~ 78 (160)
+.++|+++-..+.|++.-..++.++|.++ +.+|++++.+...+.++. .+.++ ++.++.. ..
T Consensus 7 ~~~~iLvi~~~~lGD~i~~~P~l~~L~~~~P~a~I~~l~~~~~~~l~~~--------~p~vd~vi~~~~~--------~~ 70 (349)
T 3tov_A 7 DYKRIVVTFLMHLGDVILTTPFLEVLRKAAPHSHITYVIDEKLQQVMEY--------NPNIDELIVVDKK--------GR 70 (349)
T ss_dssp TTCEEEEECCCCHHHHHTTHHHHHHHHHHCTTSEEEEEEEGGGGGGTSS--------CTTCSEEEEECCS--------SH
T ss_pred CCCEEEEEecCcccHHHHHHHHHHHHHHHCCCCEEEEEECcchhHHHhc--------CCCccEEEEeCcc--------cc
Confidence 46799999999999999999999999987 899999999877654432 25665 4444311 11
Q ss_pred HHHHHHHHHhccHHHHHHHHHHhcCCCCCc-cEEEecCCCccHHHHHHHhCCccEE
Q 040291 79 GKLFEKVLQVMPGKLEELIEDINSREDEKL-DCFIADGYMAWSMEVAKKMNVRGAL 133 (160)
Q Consensus 79 ~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~-d~vI~D~~~~~~~~~A~~lgiP~i~ 133 (160)
...+. .+.++++.+++ .+| |++|.=.-..-...++...|+|..+
T Consensus 71 ~~~~~--------~~~~l~~~Lr~---~~y~D~vidl~~~~rs~~l~~~~~a~~ri 115 (349)
T 3tov_A 71 HNSIS--------GLNEVAREINA---KGKTDIVINLHPNERTSYLAWKIHAPITT 115 (349)
T ss_dssp HHHHH--------HHHHHHHHHHH---HCCCCEEEECCCSHHHHHHHHHHCCSEEE
T ss_pred cccHH--------HHHHHHHHHhh---CCCCeEEEECCCChHHHHHHHHhCCCeEE
Confidence 11011 12234444443 579 9988432233355678888988644
No 44
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=92.13 E-value=0.17 Score=39.43 Aligned_cols=38 Identities=21% Similarity=0.275 Sum_probs=29.3
Q ss_pred CeEEEEcC---C---CCCChHHHHHHHHHHHhCCCEEEEEeCCC
Q 040291 4 PHVLVLPI---P---AQGHVIPLLEFSQCLAKQGFRVTFVNTDY 41 (160)
Q Consensus 4 ~~i~~~~~---p---~~GH~~P~l~la~~L~~rGh~Vt~~~~~~ 41 (160)
+||++++. | ..|=-.-...|+++|+++||+|+++++..
T Consensus 1 MkIl~v~~~~~P~~~~GG~~~~~~~la~~L~~~G~~V~vi~~~~ 44 (485)
T 1rzu_A 1 MNVLSVSSEIYPLIKTGGLADVVGALPIALEAHGVRTRTLIPGY 44 (485)
T ss_dssp CEEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTTCEEEEEEECC
T ss_pred CeEEEEeeeeccccccccHHHHHHHHHHHHHHcCCeEEEEeccc
Confidence 47888764 2 23445678899999999999999998754
No 45
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=92.00 E-value=0.19 Score=39.12 Aligned_cols=38 Identities=13% Similarity=0.149 Sum_probs=29.0
Q ss_pred CeEEEEcC---C---CCCChHHHHHHHHHHHhCCCEEEEEeCCC
Q 040291 4 PHVLVLPI---P---AQGHVIPLLEFSQCLAKQGFRVTFVNTDY 41 (160)
Q Consensus 4 ~~i~~~~~---p---~~GH~~P~l~la~~L~~rGh~Vt~~~~~~ 41 (160)
+||++++. | ..|=-.-...|+++|+++||+|+++++..
T Consensus 1 MkIl~v~~~~~P~~~~GG~~~~~~~la~~L~~~G~~V~vi~~~~ 44 (485)
T 2qzs_A 1 MQVLHVCSEMFPLLKTGGLADVIGALPAAQIADGVDARVLLPAF 44 (485)
T ss_dssp CEEEEECSCBTTTBCSSHHHHHHHHHHHHHHHTTCEEEEEEECC
T ss_pred CeEEEEeeeccccccCCcHHHHHHHHHHHHHHcCCEEEEEecCc
Confidence 47888864 2 23334667899999999999999998754
No 46
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=91.87 E-value=1.3 Score=33.92 Aligned_cols=106 Identities=18% Similarity=0.171 Sum_probs=58.9
Q ss_pred CCCCCChHHHHHHHHHHHhCCCEEEEEeCCCChh-hHHhhhccCCCCCCCeeeeecCC-CCCCCCCcccHHHHHHHHHHh
Q 040291 11 IPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHK-RIMESLEGKNDLGEQIRLVSIPD-GMEPWEDRNDFGKLFEKVLQV 88 (160)
Q Consensus 11 ~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~~~~-~~~~~~~~~~~~~~~i~~~~l~~-~~~~~~~~~~~~~~~~~~~~~ 88 (160)
++++--+.=+.++.++|.++ ++..++.|....+ .+..... .++.+. -|+ .+... ..+...... .
T Consensus 16 ~GtRpe~~k~~p~~~~l~~~-~~~~~~~tgqh~~~~~~~~~~------~~~~i~-~~~~~l~~~--~~~~~~~~~---~- 81 (385)
T 4hwg_A 16 VGTRPELIKLCCVISEFDKH-TKHILVHTGQNYAYELNQVFF------DDMGIR-KPDYFLEVA--ADNTAKSIG---L- 81 (385)
T ss_dssp ECSHHHHHHHHHHHHHHHHH-SEEEEEECSCHHHHHHTHHHH------C-CCCC-CCSEECCCC--CCCSHHHHH---H-
T ss_pred EEcCHhHHHHHHHHHHHHhc-CCEEEEEeCCCCChhHHHHHH------hhCCCC-CCceecCCC--CCCHHHHHH---H-
Confidence 47778888899999999887 9988887765433 2211100 122210 111 01111 111211111 1
Q ss_pred ccHHHHHHHHHHhcCCCCCccEEEe--cCCCccHHHHHHHhCCccEEEcc
Q 040291 89 MPGKLEELIEDINSREDEKLDCFIA--DGYMAWSMEVAKKMNVRGALFWP 136 (160)
Q Consensus 89 ~~~~~~~ll~~l~~~~~~~~d~vI~--D~~~~~~~~~A~~lgiP~i~~~~ 136 (160)
.-..+.+++++ .+||+||. |....++...|.++|||.+.+..
T Consensus 82 ~~~~l~~~l~~------~kPD~Vlv~gd~~~~~aalaA~~~~IPv~h~ea 125 (385)
T 4hwg_A 82 VIEKVDEVLEK------EKPDAVLFYGDTNSCLSAIAAKRRKIPIFHMEA 125 (385)
T ss_dssp HHHHHHHHHHH------HCCSEEEEESCSGGGGGHHHHHHTTCCEEEESC
T ss_pred HHHHHHHHHHh------cCCcEEEEECCchHHHHHHHHHHhCCCEEEEeC
Confidence 11235566665 58998774 44555666788999999887653
No 47
>2wqk_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus}
Probab=91.28 E-value=0.29 Score=35.50 Aligned_cols=39 Identities=21% Similarity=0.261 Sum_probs=25.1
Q ss_pred CeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCCCChh
Q 040291 4 PHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHK 44 (160)
Q Consensus 4 ~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~~~~ 44 (160)
+||++.-==|. +--=+..|+++|.+.| +|+++.+...+.
T Consensus 2 p~ILlTNDDGi-~apGi~~L~~~l~~~g-~V~VvAP~~~~S 40 (251)
T 2wqk_A 2 PTFLLVNDDGY-FSPGINALREALKSLG-RVVVVAPDRNLS 40 (251)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCCT
T ss_pred CEEEEEcCCCC-CcHHHHHHHHHHHhCC-CEEEEeeCCCCc
Confidence 45555542221 2233567888999998 699999877654
No 48
>1g5t_A COB(I)alamin adenosyltransferase; P-loop protein, cobalamin biosynthesis, RECA fold; HET: ATP; 1.80A {Salmonella typhimurium} SCOP: c.37.1.11 PDB: 1g5r_A* 1g64_A*
Probab=91.21 E-value=2.7 Score=29.21 Aligned_cols=99 Identities=11% Similarity=0.092 Sum_probs=61.1
Q ss_pred CCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCCCC----h-hhHHhhhccCCCCCCCeeeeecCCCCCCCCCccc
Q 040291 3 RPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYD----H-KRIMESLEGKNDLGEQIRLVSIPDGMEPWEDRND 77 (160)
Q Consensus 3 ~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~~----~-~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~~~ 77 (160)
+..|.+++.++.|=..-.+.+|.+.+.+|.+|-|+.--.. . ..+... -++++.....++.- ...+
T Consensus 28 ~g~i~v~tG~GkGKTTaA~GlalRA~g~G~rV~~vQF~Kg~~~~gE~~~l~~--------L~v~~~~~g~gf~~--~~~~ 97 (196)
T 1g5t_A 28 RGIIIVFTGNGKGKTTAAFGTAARAVGHGKNVGVVQFIKGTWPNGERNLLEP--------HGVEFQVMATGFTW--ETQN 97 (196)
T ss_dssp CCCEEEEESSSSCHHHHHHHHHHHHHHTTCCEEEEESSCCSSCCHHHHHHGG--------GTCEEEECCTTCCC--CGGG
T ss_pred CceEEEECCCCCCHHHHHHHHHHHHHHCCCeEEEEEeeCCCCCccHHHHHHh--------CCcEEEEccccccc--CCCC
Confidence 5679999999999999999999999999999999954332 1 112221 14777766554321 1111
Q ss_pred HHHHHHHHHHhccHHHHHHHHHHhcCCCCCccEEEecCCCc
Q 040291 78 FGKLFEKVLQVMPGKLEELIEDINSREDEKLDCFIADGYMA 118 (160)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~d~vI~D~~~~ 118 (160)
...-. ......++...+.+.+ .++|+||.|-+..
T Consensus 98 ~~~~~----~~a~~~l~~a~~~l~~---~~yDlvILDEi~~ 131 (196)
T 1g5t_A 98 READT----AACMAVWQHGKRMLAD---PLLDMVVLDELTY 131 (196)
T ss_dssp HHHHH----HHHHHHHHHHHHHTTC---TTCSEEEEETHHH
T ss_pred cHHHH----HHHHHHHHHHHHHHhc---CCCCEEEEeCCCc
Confidence 11111 1112234444444432 5899999998743
No 49
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=90.66 E-value=0.2 Score=33.00 Aligned_cols=35 Identities=17% Similarity=0.228 Sum_probs=28.7
Q ss_pred CCCCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCC
Q 040291 1 MNRPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTD 40 (160)
Q Consensus 1 m~~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~ 40 (160)
|.+.|++++- .|.+- ..+++.|.++|++|+++...
T Consensus 1 ~~~~~vlI~G---~G~vG--~~la~~L~~~g~~V~vid~~ 35 (153)
T 1id1_A 1 HRKDHFIVCG---HSILA--INTILQLNQRGQNVTVISNL 35 (153)
T ss_dssp CCCSCEEEEC---CSHHH--HHHHHHHHHTTCCEEEEECC
T ss_pred CCCCcEEEEC---CCHHH--HHHHHHHHHCCCCEEEEECC
Confidence 7788999884 35554 78899999999999999875
No 50
>3qjg_A Epidermin biosynthesis protein EPID; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: FMN; 2.04A {Staphylococcus aureus} SCOP: c.34.1.0
Probab=90.25 E-value=0.55 Score=32.12 Aligned_cols=41 Identities=12% Similarity=0.066 Sum_probs=33.5
Q ss_pred CeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCCCChhh
Q 040291 4 PHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKR 45 (160)
Q Consensus 4 ~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~~~~~ 45 (160)
+||++.-.++.|=+. ..++.+.|.++|++|.++.++.-.+.
T Consensus 6 k~IllgvTGs~aa~k-~~~ll~~L~~~g~~V~vv~T~~A~~f 46 (175)
T 3qjg_A 6 ENVLICLCGSVNSIN-ISHYIIELKSKFDEVNVIASTNGRKF 46 (175)
T ss_dssp CEEEEEECSSGGGGG-HHHHHHHHTTTCSEEEEEECTGGGGG
T ss_pred CEEEEEEeCHHHHHH-HHHHHHHHHHCCCEEEEEECcCHHHH
Confidence 678877777766665 88999999999999999999875543
No 51
>2phj_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus VF5} PDB: 2wqk_A
Probab=89.44 E-value=1.3 Score=32.13 Aligned_cols=40 Identities=20% Similarity=0.246 Sum_probs=27.8
Q ss_pred CeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCCCChhh
Q 040291 4 PHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKR 45 (160)
Q Consensus 4 ~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~~~~~ 45 (160)
+||++.-==|. +--=+..|.++|.+.| +|+++.+...+..
T Consensus 2 M~ILlTNDDGi-~apGi~aL~~~l~~~g-~V~VVAP~~~~Sg 41 (251)
T 2phj_A 2 PTFLLVNDDGY-FSPGINALREALKSLG-RVVVVAPDRNLSG 41 (251)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCCTT
T ss_pred CEEEEECCCCC-CCHHHHHHHHHHHhcC-CEEEEecCCCccC
Confidence 46666553222 3344678899999988 9999999876543
No 52
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=89.35 E-value=0.67 Score=31.08 Aligned_cols=43 Identities=23% Similarity=0.315 Sum_probs=37.2
Q ss_pred CCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCCCChhh
Q 040291 3 RPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKR 45 (160)
Q Consensus 3 ~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~~~~~ 45 (160)
+++|++.+.++.+|-.-..-++..|..+|++|..+......+.
T Consensus 18 ~~~vlla~~~gd~HdiG~~~va~~l~~~G~eVi~lG~~~p~e~ 60 (161)
T 2yxb_A 18 RYKVLVAKMGLDGHDRGAKVVARALRDAGFEVVYTGLRQTPEQ 60 (161)
T ss_dssp SCEEEEEEESSSSCCHHHHHHHHHHHHTTCEEECCCSBCCHHH
T ss_pred CCEEEEEeCCCCccHHHHHHHHHHHHHCCCEEEECCCCCCHHH
Confidence 5789999999999999999999999999999999876544433
No 53
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=89.27 E-value=0.93 Score=31.58 Aligned_cols=44 Identities=16% Similarity=0.162 Sum_probs=38.1
Q ss_pred CCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCCCChhhH
Q 040291 3 RPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKRI 46 (160)
Q Consensus 3 ~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~~~~~~ 46 (160)
+++|++.+.++..|-....-++..|.++|++|..+...-..+.+
T Consensus 88 ~~~vll~~~~gd~H~iG~~~va~~l~~~G~~v~~LG~~vp~~~l 131 (210)
T 1y80_A 88 VGKIVLGTVKGDLHDIGKNLVAMMLESGGFTVYNLGVDIEPGKF 131 (210)
T ss_dssp CCEEEEEEBTTCCCCHHHHHHHHHHHHTTCEEEECCSSBCHHHH
T ss_pred CCEEEEEeCCCcccHHHHHHHHHHHHHCCCEEEECCCCCCHHHH
Confidence 46899999999999999999999999999999998876544443
No 54
>2i2x_B MTAC, methyltransferase 1; TIM barrel and helix bundle (MTAB), rossman fold and helix B (MTAC); HET: B13; 2.50A {Methanosarcina barkeri}
Probab=88.72 E-value=1.2 Score=32.27 Aligned_cols=42 Identities=17% Similarity=0.134 Sum_probs=37.0
Q ss_pred CCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCCCChh
Q 040291 3 RPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHK 44 (160)
Q Consensus 3 ~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~~~~ 44 (160)
+++|++.+.++..|-....-++..|.++|++|..+...-..+
T Consensus 123 ~~~vlla~~~gd~HdiG~~iva~~L~~~G~~Vi~LG~~vp~e 164 (258)
T 2i2x_B 123 KGTVVCHVAEGDVHDIGKNIVTALLRANGYNVVDLGRDVPAE 164 (258)
T ss_dssp SCEEEEEECTTCCCCHHHHHHHHHHHHTTCEEEEEEEECCSH
T ss_pred CCeEEEEeCCCCccHHHHHHHHHHHHHCCCEEEECCCCCCHH
Confidence 578999999999999999999999999999999987654433
No 55
>3zqu_A Probable aromatic acid decarboxylase; lyase; HET: FNR; 1.50A {Pseudomonas aeruginosa} SCOP: c.34.1.0
Probab=88.37 E-value=0.79 Score=32.27 Aligned_cols=43 Identities=16% Similarity=0.214 Sum_probs=35.8
Q ss_pred CCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCCCChhhH
Q 040291 3 RPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKRI 46 (160)
Q Consensus 3 ~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~~~~~~ 46 (160)
+.||++.-.++.|-+. ..+|.++|.++|++|.++.|+.-.+.+
T Consensus 4 ~k~IllgvTGaiaa~k-~~~ll~~L~~~g~eV~vv~T~~A~~fi 46 (209)
T 3zqu_A 4 PERITLAMTGASGAQY-GLRLLDCLVQEEREVHFLISKAAQLVM 46 (209)
T ss_dssp CSEEEEEECSSSCHHH-HHHHHHHHHHTTCEEEEEECHHHHHHH
T ss_pred CCEEEEEEECHHHHHH-HHHHHHHHHHCCCEEEEEECccHHHHH
Confidence 4688888888888777 889999999999999999998765444
No 56
>1mvl_A PPC decarboxylase athal3A; flavoprotein, active site mutant C175S; HET: FMN; 2.00A {Arabidopsis thaliana} SCOP: c.34.1.1 PDB: 1mvn_A* 1e20_A*
Probab=88.08 E-value=0.9 Score=31.97 Aligned_cols=42 Identities=17% Similarity=0.267 Sum_probs=35.3
Q ss_pred CCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCCCChhhH
Q 040291 3 RPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKRI 46 (160)
Q Consensus 3 ~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~~~~~~ 46 (160)
+.||++.-.++.+-+. ..++.++|.++| +|.++.++.-.+.+
T Consensus 19 ~k~IllgvTGsiaa~k-~~~ll~~L~~~g-~V~vv~T~~A~~fv 60 (209)
T 1mvl_A 19 KPRVLLAASGSVAAIK-FGNLCHCFTEWA-EVRAVVTKSSLHFL 60 (209)
T ss_dssp CCEEEEEECSSGGGGG-HHHHHHHHHTTS-EEEEEECTGGGGTC
T ss_pred CCEEEEEEeCcHHHHH-HHHHHHHHhcCC-CEEEEEcchHHHhc
Confidence 5789988888888776 899999999999 99999998765443
No 57
>3mcu_A Dipicolinate synthase, B chain; NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Bacillus cereus}
Probab=87.94 E-value=0.8 Score=32.21 Aligned_cols=41 Identities=10% Similarity=-0.070 Sum_probs=30.9
Q ss_pred CCCeEEEEcCCCCCChHH-HHHHHHHHHhCCCEEEEEeCCCCh
Q 040291 2 NRPHVLVLPIPAQGHVIP-LLEFSQCLAKQGFRVTFVNTDYDH 43 (160)
Q Consensus 2 ~~~~i~~~~~p~~GH~~P-~l~la~~L~~rGh~Vt~~~~~~~~ 43 (160)
+..||++.-.++ +...- ..++.+.|.++|++|.++.|+.-.
T Consensus 4 ~~k~IllgiTGs-iaayk~~~~ll~~L~~~g~eV~vv~T~~A~ 45 (207)
T 3mcu_A 4 KGKRIGFGFTGS-HCTYEEVMPHLEKLIAEGAEVRPVVSYTVQ 45 (207)
T ss_dssp TTCEEEEEECSC-GGGGTTSHHHHHHHHHTTCEEEEEECC---
T ss_pred CCCEEEEEEECh-HHHHHHHHHHHHHHHhCCCEEEEEEehHHH
Confidence 457888777675 44554 789999999999999999988654
No 58
>3lqk_A Dipicolinate synthase subunit B; flavoprotein, PSI2, MCSG, structural protein structure initiative, midwest center for structural genomics; 2.10A {Bacillus halodurans}
Probab=87.42 E-value=1 Score=31.49 Aligned_cols=42 Identities=19% Similarity=0.021 Sum_probs=33.4
Q ss_pred CCCeEEEEcCCCCCChH-HHHHHHHHHHhCCCEEEEEeCCCChh
Q 040291 2 NRPHVLVLPIPAQGHVI-PLLEFSQCLAKQGFRVTFVNTDYDHK 44 (160)
Q Consensus 2 ~~~~i~~~~~p~~GH~~-P~l~la~~L~~rGh~Vt~~~~~~~~~ 44 (160)
+..||++.-.++ +... =..++.++|.++|++|.++.++.-.+
T Consensus 6 ~~k~I~lgiTGs-~aa~~k~~~ll~~L~~~g~eV~vv~T~~A~~ 48 (201)
T 3lqk_A 6 AGKHVGFGLTGS-HCTYHEVLPQMERLVELGAKVTPFVTHTVQT 48 (201)
T ss_dssp TTCEEEEECCSC-GGGGGGTHHHHHHHHHTTCEEEEECSSCSCC
T ss_pred CCCEEEEEEECh-HHHHHHHHHHHHHHhhCCCEEEEEEChhHHH
Confidence 456888777776 4444 78999999999999999999876543
No 59
>3ezx_A MMCP 1, monomethylamine corrinoid protein 1; N terminal all helical bundle C terminal rossmann fold, cobalt, metal-binding; HET: HCB; 2.56A {Methanosarcina barkeri}
Probab=87.03 E-value=1.5 Score=30.89 Aligned_cols=44 Identities=14% Similarity=0.153 Sum_probs=38.4
Q ss_pred CCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCCCChhhH
Q 040291 3 RPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKRI 46 (160)
Q Consensus 3 ~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~~~~~~ 46 (160)
+++|++.+.++..|-....-++..|..+|++|..+...-..+.+
T Consensus 92 ~~~vll~~v~gd~HdiG~~iv~~~l~~~G~~Vi~LG~~vp~e~i 135 (215)
T 3ezx_A 92 AGLAITFVAEGDIHDIGHRLVTTMLGANGFQIVDLGVDVLNENV 135 (215)
T ss_dssp CCEEEEEECTTCCCCHHHHHHHHHHHHTSCEEEECCSSCCHHHH
T ss_pred CCeEEEEeCCCChhHHHHHHHHHHHHHCCCeEEEcCCCCCHHHH
Confidence 47899999999999999999999999999999998776554443
No 60
>1p3y_1 MRSD protein; flavoprotein, FMN, rossmann fold, HFCD family, oxdidative decarboxylation, cystein, lantibiotics, mersacidin, oxidore; HET: FAD; 2.54A {Bacillus SP} SCOP: c.34.1.1
Probab=85.09 E-value=0.76 Score=31.95 Aligned_cols=42 Identities=10% Similarity=-0.024 Sum_probs=33.8
Q ss_pred CCCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCCCChh
Q 040291 2 NRPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHK 44 (160)
Q Consensus 2 ~~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~~~~ 44 (160)
++.||++.-.++.|=+. ..++.+.|.++|++|.++.++.-.+
T Consensus 7 ~~k~IllgvTGs~aa~k-~~~l~~~L~~~g~~V~vv~T~~A~~ 48 (194)
T 1p3y_1 7 KDKKLLIGICGSISSVG-ISSYLLYFKSFFKEIRVVMTKTAED 48 (194)
T ss_dssp GGCEEEEEECSCGGGGG-THHHHHHHTTTSSEEEEEECHHHHH
T ss_pred CCCEEEEEEECHHHHHH-HHHHHHHHHHCCCEEEEEEchhHHH
Confidence 34688888877777665 7899999999999999999876543
No 61
>2ejb_A Probable aromatic acid decarboxylase; phenylacrylic acid decarboxylase, X-RAY diffraction, structural genomics, NPPSFA; 2.15A {Aquifex aeolicus}
Probab=85.03 E-value=1.9 Score=29.82 Aligned_cols=43 Identities=16% Similarity=0.169 Sum_probs=35.2
Q ss_pred CeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCCCChhhHH
Q 040291 4 PHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKRIM 47 (160)
Q Consensus 4 ~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~~~~~~~ 47 (160)
.||++.-.++.|-+ =..++.++|.++|++|.++.|+.-.+.+.
T Consensus 2 k~IllgvTGs~aa~-k~~~l~~~L~~~g~~V~vv~T~~A~~~i~ 44 (189)
T 2ejb_A 2 QKIALCITGASGVI-YGIKLLQVLEELDFSVDLVISRNAKVVLK 44 (189)
T ss_dssp CEEEEEECSSTTHH-HHHHHHHHHHHTTCEEEEEECHHHHHHHH
T ss_pred CEEEEEEECHHHHH-HHHHHHHHHHHCCCEEEEEEChhHHHHhh
Confidence 57888888888855 57899999999999999999987655443
No 62
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=84.98 E-value=3.1 Score=28.75 Aligned_cols=49 Identities=12% Similarity=0.205 Sum_probs=37.5
Q ss_pred HHHHHHHHHHhcCCCCCccEEEecCCCccHHHHHHHhCCccEEEccchHHHHHHH
Q 040291 91 GKLEELIEDINSREDEKLDCFIADGYMAWSMEVAKKMNVRGALFWPSSAASVALL 145 (160)
Q Consensus 91 ~~~~~ll~~l~~~~~~~~d~vI~D~~~~~~~~~A~~lgiP~i~~~~~~~~~~~~~ 145 (160)
...++.++++.+ .++|+||.|.. ...+|+++|+|.+.+.++.-+....+
T Consensus 129 ~e~~~~i~~l~~---~G~~vvVG~~~---~~~~A~~~Gl~~vli~sg~eSI~~Ai 177 (196)
T 2q5c_A 129 DEITTLISKVKT---ENIKIVVSGKT---VTDEAIKQGLYGETINSGEESLRRAI 177 (196)
T ss_dssp GGHHHHHHHHHH---TTCCEEEECHH---HHHHHHHTTCEEEECCCCHHHHHHHH
T ss_pred HHHHHHHHHHHH---CCCeEEECCHH---HHHHHHHcCCcEEEEecCHHHHHHHH
Confidence 456777777776 68999998844 57899999999999988665554443
No 63
>1qzu_A Hypothetical protein MDS018; alpha-beta sandwich, lyase; HET: FMN; 2.91A {Homo sapiens} SCOP: c.34.1.1
Probab=84.92 E-value=1.2 Score=31.20 Aligned_cols=44 Identities=23% Similarity=0.187 Sum_probs=32.8
Q ss_pred CCCeEEEEcCCCCCChHHHHHHHHHHHh-CCCEEEEEeCCCChhhH
Q 040291 2 NRPHVLVLPIPAQGHVIPLLEFSQCLAK-QGFRVTFVNTDYDHKRI 46 (160)
Q Consensus 2 ~~~~i~~~~~p~~GH~~P~l~la~~L~~-rGh~Vt~~~~~~~~~~~ 46 (160)
++.||++.-.++.+=+. ..++.++|.+ +|++|.++.|+.-.+.+
T Consensus 18 ~~k~IllgvTGsiaa~k-~~~lv~~L~~~~g~~V~vv~T~~A~~fi 62 (206)
T 1qzu_A 18 RKFHVLVGVTGSVAALK-LPLLVSKLLDIPGLEVAVVTTERAKHFY 62 (206)
T ss_dssp SSEEEEEEECSSGGGGT-HHHHHHHHC---CEEEEEEECTGGGGSS
T ss_pred CCCEEEEEEeChHHHHH-HHHHHHHHhcccCCEEEEEECHhHHHHh
Confidence 45688888877777554 5899999999 89999999998765443
No 64
>3bfv_A CAPA1, CAPB2, membrane protein CAPA1, protein tyrosine kinase; chimerical protein, P-loop protein, capsule biogenesis/degradation; HET: ADP; 1.80A {Staphylococcus aureus} PDB: 2ved_A*
Probab=84.79 E-value=9.1 Score=27.60 Aligned_cols=40 Identities=18% Similarity=0.369 Sum_probs=31.6
Q ss_pred CCeEEEEc--CCCCCChHHHHHHHHHHHhCCCEEEEEeCCCC
Q 040291 3 RPHVLVLP--IPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYD 42 (160)
Q Consensus 3 ~~~i~~~~--~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~~ 42 (160)
++++++++ -++.|=..-...||..|+++|.+|.++-.+..
T Consensus 81 ~~kvI~vts~kgG~GKTt~a~nLA~~lA~~G~rVLLID~D~~ 122 (271)
T 3bfv_A 81 AVQSIVITSEAPGAGKSTIAANLAVAYAQAGYKTLIVDGDMR 122 (271)
T ss_dssp CCCEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCSS
T ss_pred CCeEEEEECCCCCCcHHHHHHHHHHHHHhCCCeEEEEeCCCC
Confidence 34555554 46789899999999999999999999876643
No 65
>1sbz_A Probable aromatic acid decarboxylase; FMN binding, PAD1, UBIX, montreal-kingston bacterial structu genomics initiative, BSGI; HET: FMN; 2.00A {Escherichia coli} SCOP: c.34.1.1
Probab=84.55 E-value=1.3 Score=30.78 Aligned_cols=43 Identities=16% Similarity=0.177 Sum_probs=34.5
Q ss_pred CeEEEEcCCCCCChHHHHHHHHHHHhC-CCEEEEEeCCCChhhHH
Q 040291 4 PHVLVLPIPAQGHVIPLLEFSQCLAKQ-GFRVTFVNTDYDHKRIM 47 (160)
Q Consensus 4 ~~i~~~~~p~~GH~~P~l~la~~L~~r-Gh~Vt~~~~~~~~~~~~ 47 (160)
+||++.-.++.|-+. ..++.+.|.++ |++|.++.|+.-.+.+.
T Consensus 1 ~~IllgvTGsiaa~k-~~~ll~~L~~~~g~~V~vv~T~~A~~fi~ 44 (197)
T 1sbz_A 1 MKLIVGMTGATGAPL-GVALLQALREMPNVETHLVMSKWAKTTIE 44 (197)
T ss_dssp CEEEEEECSSSCHHH-HHHHHHHHHTCTTCEEEEEECHHHHHHHH
T ss_pred CEEEEEEeChHHHHH-HHHHHHHHHhccCCEEEEEECchHHHHhH
Confidence 377777777777766 89999999999 99999999987655443
No 66
>1g63_A Epidermin modifying enzyme EPID; alpha, beta protein, rossmann like fold, oxidoreductase; HET: FMN; 2.50A {Staphylococcus epidermidis} SCOP: c.34.1.1 PDB: 1g5q_A*
Probab=83.80 E-value=1.2 Score=30.59 Aligned_cols=41 Identities=7% Similarity=0.030 Sum_probs=32.3
Q ss_pred CeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCCCChhh
Q 040291 4 PHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKR 45 (160)
Q Consensus 4 ~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~~~~~ 45 (160)
.||++.-.++.|=+ =..++.++|.++|++|.++.|+.-.+.
T Consensus 3 k~IllgvTGs~aa~-k~~~l~~~L~~~g~~V~vv~T~~A~~f 43 (181)
T 1g63_A 3 GKLLICATASINVI-NINHYIVELKQHFDEVNILFSPSSKNF 43 (181)
T ss_dssp CCEEEEECSCGGGG-GHHHHHHHHTTTSSCEEEEECGGGGGT
T ss_pred CEEEEEEECHHHHH-HHHHHHHHHHHCCCEEEEEEchhHHHH
Confidence 46777776776655 578999999999999999999875543
No 67
>3cio_A ETK, tyrosine-protein kinase ETK; WZC, escherichia coli tyrosine kinase domain, signaling protein, transferase, inner membrane, membrane; 2.50A {Escherichia coli}
Probab=83.55 E-value=11 Score=27.59 Aligned_cols=38 Identities=18% Similarity=0.445 Sum_probs=30.7
Q ss_pred CeEEEEc--CCCCCChHHHHHHHHHHHhCCCEEEEEeCCC
Q 040291 4 PHVLVLP--IPAQGHVIPLLEFSQCLAKQGFRVTFVNTDY 41 (160)
Q Consensus 4 ~~i~~~~--~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~ 41 (160)
.++++++ -++.|=..-...||..|+++|.+|.++-.+.
T Consensus 104 ~kvI~vts~kgG~GKTtva~nLA~~lA~~G~rVLLID~D~ 143 (299)
T 3cio_A 104 NNILMITGATPDSGKTFVSSTLAAVIAQSDQKVLFIDADL 143 (299)
T ss_dssp CCEEEEEESSSSSCHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred CeEEEEECCCCCCChHHHHHHHHHHHHhCCCcEEEEECCC
Confidence 4555554 3678889999999999999999999987654
No 68
>2lpm_A Two-component response regulator; transcription regulator; NMR {Sinorhizobium meliloti}
Probab=82.93 E-value=1.5 Score=27.87 Aligned_cols=40 Identities=23% Similarity=0.086 Sum_probs=26.3
Q ss_pred HHHHHHHhcCCCCCccEEEecCCCcc--HHHHHHH---hCCccEEEcc
Q 040291 94 EELIEDINSREDEKLDCFIADGYMAW--SMEVAKK---MNVRGALFWP 136 (160)
Q Consensus 94 ~~ll~~l~~~~~~~~d~vI~D~~~~~--~~~~A~~---lgiP~i~~~~ 136 (160)
++.++.+.+ .+||+||.|..++. +..++++ .++|.|.++.
T Consensus 43 ~eAl~~~~~---~~~DlvllDi~mP~~~G~el~~~lr~~~ipvI~lTa 87 (123)
T 2lpm_A 43 QEALDIARK---GQFDIAIIDVNLDGEPSYPVADILAERNVPFIFATG 87 (123)
T ss_dssp HHHHHHHHH---CCSSEEEECSSSSSCCSHHHHHHHHHTCCSSCCBCT
T ss_pred HHHHHHHHh---CCCCEEEEecCCCCCCHHHHHHHHHcCCCCEEEEec
Confidence 444444443 58999999998865 4555544 4799776543
No 69
>3qxc_A Dethiobiotin synthetase; DTBS, structural genomics, ATP BIND biology, protein structure initiative, midwest center for S genomics, MCSG; HET: ATP; 1.34A {Helicobacter pylori} PDB: 3mle_A* 3qxh_A* 3qxj_A* 3qxs_A* 3qxx_A* 3qy0_A* 2qmo_A
Probab=81.50 E-value=12 Score=26.64 Aligned_cols=28 Identities=11% Similarity=0.100 Sum_probs=24.4
Q ss_pred CCCCCChHHHHHHHHHHHhCCCEEEEEe
Q 040291 11 IPAQGHVIPLLEFSQCLAKQGFRVTFVN 38 (160)
Q Consensus 11 ~p~~GH~~P~l~la~~L~~rGh~Vt~~~ 38 (160)
-++.|=..-...|++.|+++|.+|.++=
T Consensus 30 ~t~vGKT~vs~gL~~~L~~~G~~V~~fK 57 (242)
T 3qxc_A 30 NTNAGKTTCARLLAQYCNACGVKTILLK 57 (242)
T ss_dssp STTSSHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred CCCCcHHHHHHHHHHHHHhCCCceEEEe
Confidence 3556888899999999999999999974
No 70
>1e2b_A Enzyme IIB-cellobiose; phosphotransferase system, transferas transport, phosphorylation; NMR {Escherichia coli} SCOP: c.44.2.1 PDB: 1iib_A 1h9c_A* 2wwv_D 2wy2_D
Probab=81.24 E-value=3.7 Score=25.40 Aligned_cols=40 Identities=10% Similarity=0.130 Sum_probs=32.9
Q ss_pred CCCCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCC
Q 040291 1 MNRPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTD 40 (160)
Q Consensus 1 m~~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~ 40 (160)
|+..+|++++..|.|--.-.-.+=+.+.++|.++.+-...
T Consensus 1 M~mkkIll~Cg~G~sTS~l~~k~~~~~~~~gi~~~i~a~~ 40 (106)
T 1e2b_A 1 MEKKHIYLFSSAGMSTSLLVSKMRAQAEKYEVPVIIEAFP 40 (106)
T ss_dssp CCCEEEEEECSSSTTTHHHHHHHHHHHHHSCCSEEEEEEC
T ss_pred CCCcEEEEECCCchhHHHHHHHHHHHHHHCCCCeEEEEec
Confidence 7788999999999887777778888888999988875443
No 71
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=80.68 E-value=2.5 Score=27.21 Aligned_cols=32 Identities=13% Similarity=0.214 Sum_probs=23.9
Q ss_pred CCccEEEecCCCcc--HHHHHHHh-------CCccEEEccc
Q 040291 106 EKLDCFIADGYMAW--SMEVAKKM-------NVRGALFWPS 137 (160)
Q Consensus 106 ~~~d~vI~D~~~~~--~~~~A~~l-------giP~i~~~~~ 137 (160)
.+||+||.|..++. |..+++++ ++|.+.+...
T Consensus 56 ~~~DlillD~~MP~mdG~el~~~ir~~~~~~~ipvI~lTa~ 96 (134)
T 3to5_A 56 GDFDFVVTDWNMPGMQGIDLLKNIRADEELKHLPVLMITAE 96 (134)
T ss_dssp HCCSEEEEESCCSSSCHHHHHHHHHHSTTTTTCCEEEEESS
T ss_pred CCCCEEEEcCCCCCCCHHHHHHHHHhCCCCCCCeEEEEECC
Confidence 57999999998875 56666654 4787777554
No 72
>3lrx_A Putative hydrogenase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.60A {Pyrococcus furiosus}
Probab=80.15 E-value=1.9 Score=28.62 Aligned_cols=36 Identities=14% Similarity=0.194 Sum_probs=27.6
Q ss_pred CeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCCCC
Q 040291 4 PHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYD 42 (160)
Q Consensus 4 ~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~~ 42 (160)
.+++++. +|.| +.|++.+++.|.++|.+|+++ ....
T Consensus 24 ~~~llIa-GG~G-ItPl~sm~~~l~~~~~~v~l~-g~r~ 59 (158)
T 3lrx_A 24 GKILAIG-AYTG-IVEVYPIAKAWQEIGNDVTTL-HVTF 59 (158)
T ss_dssp SEEEEEE-ETTH-HHHHHHHHHHHHHHTCEEEEE-EECB
T ss_pred CeEEEEE-ccCc-HHHHHHHHHHHHhcCCcEEEE-EeCC
Confidence 4566665 3444 899999999999999999999 5543
No 73
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=79.42 E-value=4.1 Score=24.87 Aligned_cols=41 Identities=15% Similarity=0.155 Sum_probs=26.7
Q ss_pred HHHHHHHhcCCCCCccEEEecCCCcc--HHHHHHHh-------CCccEEEccc
Q 040291 94 EELIEDINSREDEKLDCFIADGYMAW--SMEVAKKM-------NVRGALFWPS 137 (160)
Q Consensus 94 ~~ll~~l~~~~~~~~d~vI~D~~~~~--~~~~A~~l-------giP~i~~~~~ 137 (160)
++.++.+.+ .+||+||.|...+. +..+.+++ ++|.+.+...
T Consensus 36 ~~al~~l~~---~~~dlvllD~~~p~~~g~~~~~~l~~~~~~~~~pii~~s~~ 85 (122)
T 3gl9_A 36 QIALEKLSE---FTPDLIVLXIMMPVMDGFTVLKKLQEKEEWKRIPVIVLTAK 85 (122)
T ss_dssp HHHHHHHTT---BCCSEEEECSCCSSSCHHHHHHHHHTSTTTTTSCEEEEESC
T ss_pred HHHHHHHHh---cCCCEEEEeccCCCCcHHHHHHHHHhcccccCCCEEEEecC
Confidence 444555433 57999999987754 55565544 5788877654
No 74
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=78.98 E-value=2.9 Score=30.74 Aligned_cols=44 Identities=16% Similarity=0.153 Sum_probs=38.7
Q ss_pred CeEEEEcCCCCCChHHHHHHHHHHHhC--CCEEEEEeCCCChhhHH
Q 040291 4 PHVLVLPIPAQGHVIPLLEFSQCLAKQ--GFRVTFVNTDYDHKRIM 47 (160)
Q Consensus 4 ~~i~~~~~p~~GH~~P~l~la~~L~~r--Gh~Vt~~~~~~~~~~~~ 47 (160)
+||+++-..+.|++.-..++.++|.++ +.+|++++.+...+.+.
T Consensus 1 ~~ILii~~~~iGD~i~~~p~l~~Lk~~~P~a~I~~l~~~~~~~l~~ 46 (326)
T 2gt1_A 1 MRVLIVKTSSMGDVLHTLPALTDAQQAIPGIKFDWVVEEGFAQIPS 46 (326)
T ss_dssp CEEEEECCCCHHHHHHHHHHHHHHHHHSTTCEEEEEEEGGGTHHHH
T ss_pred CeEEEEeccccchHHhHHHHHHHHHHhCCCCEEEEEEehhhhHHHh
Confidence 489999999999999999999999987 89999999987765543
No 75
>3kkl_A Probable chaperone protein HSP33; peptidase, heat shock protein, hydrolase, protease, stress response; 2.03A {Saccharomyces cerevisiae} PDB: 3mii_A*
Probab=78.81 E-value=5.9 Score=28.32 Aligned_cols=42 Identities=26% Similarity=0.399 Sum_probs=28.7
Q ss_pred CCCCeEEEEcCCCCCC-----------hHHHHHHHHHHHhCCCEEEEEeCCCC
Q 040291 1 MNRPHVLVLPIPAQGH-----------VIPLLEFSQCLAKQGFRVTFVNTDYD 42 (160)
Q Consensus 1 m~~~~i~~~~~p~~GH-----------~~P~l~la~~L~~rGh~Vt~~~~~~~ 42 (160)
|..++|+++-....+. ..=+..-...|.+.|++|+++++...
T Consensus 1 m~m~kvlivlt~~~~~~~~~g~~tG~~~~E~~~p~~~l~~aG~~V~iaS~~g~ 53 (244)
T 3kkl_A 1 MTPKRALISLTSYHGPFYKDGAKTGVFVVEILRSFDTFEKHGFEVDFVSETGG 53 (244)
T ss_dssp --CCEEEEECCCCCCCCSTTSCCCCBCHHHHHHHHHHHHTTTCEEEEEESSSC
T ss_pred CCCCEEEEEECCCCcccCCCCCcCcccHHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 7778888887654221 14566667788889999999997643
No 76
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=78.75 E-value=3.4 Score=29.58 Aligned_cols=35 Identities=29% Similarity=0.412 Sum_probs=25.8
Q ss_pred CCCCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCC
Q 040291 1 MNRPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTD 40 (160)
Q Consensus 1 m~~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~ 40 (160)
|+.++|+++- + |-+ =..|+++|.++||+|+.+.-.
T Consensus 1 M~~~~ilVtG--a-G~i--G~~l~~~L~~~g~~V~~~~r~ 35 (286)
T 3gpi_A 1 MSLSKILIAG--C-GDL--GLELARRLTAQGHEVTGLRRS 35 (286)
T ss_dssp -CCCCEEEEC--C-SHH--HHHHHHHHHHTTCCEEEEECT
T ss_pred CCCCcEEEEC--C-CHH--HHHHHHHHHHCCCEEEEEeCC
Confidence 7777888773 3 633 457899999999999998654
No 77
>2yvq_A Carbamoyl-phosphate synthase; conserved hypothetical protein, structural genomics, NPPSFA; 1.98A {Homo sapiens}
Probab=77.85 E-value=6 Score=25.80 Aligned_cols=90 Identities=12% Similarity=0.074 Sum_probs=53.3
Q ss_pred CChHHHHHHHHHHHhCCCEEEEEeCCCChhhHHhhhccCCCCCCCeeeeecCCCCCCCCCcccHHHHHHHHHHhccHHHH
Q 040291 15 GHVIPLLEFSQCLAKQGFRVTFVNTDYDHKRIMESLEGKNDLGEQIRLVSIPDGMEPWEDRNDFGKLFEKVLQVMPGKLE 94 (160)
Q Consensus 15 GH~~P~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (160)
.+-.-++++++.|.+.|+++ ++|....+.+.. .|+....+... +++.+ +...+.+.
T Consensus 34 ~dK~~l~~~a~~l~~lGf~i--~AT~GTa~~L~~---------~Gi~v~~v~k~-~egg~------------~~~~~~i~ 89 (143)
T 2yvq_A 34 SFRPRFLGVAEQLHNEGFKL--FATEATSDWLNA---------NNVPATPVAWP-SQEGQ------------NPSLSSIR 89 (143)
T ss_dssp GGHHHHHHHHHHHHTTTCEE--EEEHHHHHHHHH---------TTCCCEEECCG-GGC-----------------CBCHH
T ss_pred cchHHHHHHHHHHHHCCCEE--EECchHHHHHHH---------cCCeEEEEEec-cCCCc------------ccccccHH
Confidence 34566889999999999964 455555555543 46666555321 11100 00002355
Q ss_pred HHHHHHhcCCCCCccEEEecCCC--------ccHHHHHHHhCCccEEE
Q 040291 95 ELIEDINSREDEKLDCFIADGYM--------AWSMEVAKKMNVRGALF 134 (160)
Q Consensus 95 ~ll~~l~~~~~~~~d~vI~D~~~--------~~~~~~A~~lgiP~i~~ 134 (160)
+++++ .+.|+||.-+-- ....-.|-.+|||+++-
T Consensus 90 d~i~~------g~i~lVInt~~~~~~~~~d~~~iRR~Av~~~IP~~T~ 131 (143)
T 2yvq_A 90 KLIRD------GSIDLVINLPNNNTKFVHDNYVIRRTAVDSGIPLLTN 131 (143)
T ss_dssp HHHHT------TSCCEEEECCCCCGGGHHHHHHHHHHHHHTTCCEECS
T ss_pred HHHHC------CCceEEEECCCCCCcCCccHHHHHHHHHHhCCCeEcC
Confidence 55554 689999964432 12355789999998864
No 78
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=77.24 E-value=2 Score=32.01 Aligned_cols=35 Identities=26% Similarity=0.296 Sum_probs=25.5
Q ss_pred CCCCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCC
Q 040291 1 MNRPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTD 40 (160)
Q Consensus 1 m~~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~ 40 (160)
|+.++|+++-.+..| ..+++.|+++||+|+++...
T Consensus 2 m~~mki~iiG~G~~G-----~~~a~~L~~~g~~V~~~~r~ 36 (359)
T 1bg6_A 2 IESKTYAVLGLGNGG-----HAFAAYLALKGQSVLAWDID 36 (359)
T ss_dssp --CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSC
T ss_pred CCcCeEEEECCCHHH-----HHHHHHHHhCCCEEEEEeCC
Confidence 667899999765555 34788899999999987543
No 79
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=76.97 E-value=1.4 Score=35.02 Aligned_cols=35 Identities=17% Similarity=0.414 Sum_probs=28.1
Q ss_pred CCCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCCC
Q 040291 2 NRPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDY 41 (160)
Q Consensus 2 ~~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~ 41 (160)
+|+||+|+-.+..| +.+|+.|.++|++||+|....
T Consensus 41 ~KprVVIIGgG~AG-----l~~A~~L~~~~~~VtLId~~~ 75 (502)
T 4g6h_A 41 DKPNVLILGSGWGA-----ISFLKHIDTKKYNVSIISPRS 75 (502)
T ss_dssp SSCEEEEECSSHHH-----HHHHHHSCTTTCEEEEEESSS
T ss_pred CCCCEEEECCcHHH-----HHHHHHhhhCCCcEEEECCCC
Confidence 37899999865555 577899999999999998764
No 80
>3dqz_A Alpha-hydroxynitrIle lyase-like protein; A/B-hydrloase fold, cyanogenesis; 2.50A {Arabidopsis thaliana} SCOP: c.69.1.0
Probab=76.91 E-value=2.3 Score=29.22 Aligned_cols=40 Identities=30% Similarity=0.282 Sum_probs=28.2
Q ss_pred CCCCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCC
Q 040291 1 MNRPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTD 40 (160)
Q Consensus 1 m~~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~ 40 (160)
|++...+++-.+..|...-+..+++.|+++|++|..+--.
T Consensus 1 me~g~~vv~lHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~ 40 (258)
T 3dqz_A 1 MERKHHFVLVHNAYHGAWIWYKLKPLLESAGHRVTAVELA 40 (258)
T ss_dssp --CCCEEEEECCTTCCGGGGTTHHHHHHHTTCEEEEECCT
T ss_pred CCCCCcEEEECCCCCccccHHHHHHHHHhCCCEEEEecCC
Confidence 6775545555566666677889999999999999887543
No 81
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=75.50 E-value=2.2 Score=31.85 Aligned_cols=35 Identities=17% Similarity=0.172 Sum_probs=27.7
Q ss_pred CCCCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCC
Q 040291 1 MNRPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTD 40 (160)
Q Consensus 1 m~~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~ 40 (160)
|..++|+++-.+..| ..+|..|++.||+|+++...
T Consensus 1 M~~mkI~IiGaG~~G-----~~~a~~L~~~g~~V~~~~r~ 35 (335)
T 3ghy_A 1 MSLTRICIVGAGAVG-----GYLGARLALAGEAINVLARG 35 (335)
T ss_dssp -CCCCEEEESCCHHH-----HHHHHHHHHTTCCEEEECCH
T ss_pred CCCCEEEEECcCHHH-----HHHHHHHHHCCCEEEEEECh
Confidence 777899999766666 35788999999999998764
No 82
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=74.63 E-value=3.7 Score=30.89 Aligned_cols=37 Identities=8% Similarity=0.077 Sum_probs=27.7
Q ss_pred CeEEEEc--CCC-CCChHHHHHHHHHHHhCCCEEEEEeCCC
Q 040291 4 PHVLVLP--IPA-QGHVIPLLEFSQCLAKQGFRVTFVNTDY 41 (160)
Q Consensus 4 ~~i~~~~--~p~-~GH~~P~l~la~~L~~rGh~Vt~~~~~~ 41 (160)
+||+++. +|. .|--.-...|+++|+++ |+|++++...
T Consensus 1 MkI~~v~~~~p~~gG~~~~~~~l~~~L~~~-~~V~v~~~~~ 40 (413)
T 3oy2_A 1 MKLIIVGAHSSVPSGYGRVMRAIVPRISKA-HEVIVFGIHA 40 (413)
T ss_dssp CEEEEEEECTTCCSHHHHHHHHHHHHHTTT-SEEEEEEESC
T ss_pred CeEEEecCCCCCCCCHHHHHHHHHHHHHhc-CCeEEEeecC
Confidence 4777774 333 35556788999999999 9999987644
No 83
>3vot_A L-amino acid ligase, BL00235; ATP-grAsp motif, ATP-binding; HET: ADP PG4; 1.80A {Bacillus licheniformis}
Probab=74.20 E-value=16 Score=27.89 Aligned_cols=36 Identities=17% Similarity=0.254 Sum_probs=22.9
Q ss_pred CC--CCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCCC
Q 040291 1 MN--RPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDY 41 (160)
Q Consensus 1 m~--~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~ 41 (160)
|+ +.||+++.. ++.+ | .+.++..+.|++|+++.+..
T Consensus 1 M~~~~k~l~Il~~-~~~~--~--~i~~aa~~lG~~vv~v~~~~ 38 (425)
T 3vot_A 1 MTKRNKNLAIICQ-NKHL--P--FIFEEAERLGLKVTFFYNSA 38 (425)
T ss_dssp -CCCCCEEEEECC-CTTC--C--HHHHHHHHTTCEEEEEEETT
T ss_pred CCCCCcEEEEECC-ChhH--H--HHHHHHHHCCCEEEEEECCC
Confidence 54 356777763 3332 2 24677788899999986654
No 84
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=73.98 E-value=11 Score=26.64 Aligned_cols=40 Identities=10% Similarity=0.350 Sum_probs=32.0
Q ss_pred HHHHHHHHHHhcCCCCCccEEEecCCCccHHHHHHHhCCccEEEcc
Q 040291 91 GKLEELIEDINSREDEKLDCFIADGYMAWSMEVAKKMNVRGALFWP 136 (160)
Q Consensus 91 ~~~~~ll~~l~~~~~~~~d~vI~D~~~~~~~~~A~~lgiP~i~~~~ 136 (160)
+..++.++++.+ .++++||.|.. ...+|+++|+|.+.+.+
T Consensus 141 ee~~~~i~~l~~---~G~~vVVG~~~---~~~~A~~~Gl~~vlI~s 180 (225)
T 2pju_A 141 EDARGQINELKA---NGTEAVVGAGL---ITDLAEEAGMTGIFIYS 180 (225)
T ss_dssp HHHHHHHHHHHH---TTCCEEEESHH---HHHHHHHTTSEEEESSC
T ss_pred HHHHHHHHHHHH---CCCCEEECCHH---HHHHHHHcCCcEEEECC
Confidence 456777777766 57999998844 57899999999999984
No 85
>1mio_A Nitrogenase molybdenum iron protein (alpha chain); HET: HCA CFM CLP; 3.00A {Clostridium pasteurianum} SCOP: c.92.2.3
Probab=73.96 E-value=23 Score=28.35 Aligned_cols=26 Identities=27% Similarity=0.115 Sum_probs=21.1
Q ss_pred CCccEEEecCCCccHHHHHHHhCCccEEE
Q 040291 106 EKLDCFIADGYMAWSMEVAKKMNVRGALF 134 (160)
Q Consensus 106 ~~~d~vI~D~~~~~~~~~A~~lgiP~i~~ 134 (160)
.+||++|.. .....+|+++|||.+.+
T Consensus 455 ~~pDl~ig~---~~~~~~a~k~gIP~~~~ 480 (533)
T 1mio_A 455 LKPDMFFAG---IKEKFVIQKGGVLSKQL 480 (533)
T ss_dssp HCCSEEEEC---HHHHHHHHHTTCEEEET
T ss_pred cCCCEEEcc---cchhHHHHhcCCCEEEe
Confidence 479999965 44678999999999853
No 86
>3t6k_A Response regulator receiver; flavodoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; HET: MSE; 1.86A {Chloroflexus aurantiacus} SCOP: c.23.1.0
Probab=73.73 E-value=7.6 Score=24.13 Aligned_cols=32 Identities=13% Similarity=0.170 Sum_probs=21.6
Q ss_pred CCccEEEecCCCcc--HHHHHHHh-------CCccEEEccc
Q 040291 106 EKLDCFIADGYMAW--SMEVAKKM-------NVRGALFWPS 137 (160)
Q Consensus 106 ~~~d~vI~D~~~~~--~~~~A~~l-------giP~i~~~~~ 137 (160)
.+||+||.|...+. +..+.+++ ++|.+.+...
T Consensus 47 ~~~dlvl~D~~lp~~~g~~~~~~lr~~~~~~~~pii~~t~~ 87 (136)
T 3t6k_A 47 NLPDALICDVLLPGIDGYTLCKRVRQHPLTKTLPILMLTAQ 87 (136)
T ss_dssp SCCSEEEEESCCSSSCHHHHHHHHHHSGGGTTCCEEEEECT
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHcCCCcCCccEEEEecC
Confidence 57999999987754 45554433 5787776654
No 87
>3bul_A Methionine synthase; transferase, reactivation conformation, cobalamin, intermodular interactions, amino-acid biosynthesis, cobalt; HET: B12; 2.30A {Escherichia coli} SCOP: a.46.1.1 c.23.6.1 d.173.1.1 PDB: 3iv9_A* 3iva_A* 1k7y_A* 1k98_A* 1bmt_A*
Probab=73.26 E-value=6.8 Score=31.89 Aligned_cols=43 Identities=7% Similarity=0.070 Sum_probs=37.8
Q ss_pred CCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCCCChhh
Q 040291 3 RPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKR 45 (160)
Q Consensus 3 ~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~~~~~ 45 (160)
+.+|++.+.++..|-....-++..|..+|++|..+...-..+.
T Consensus 98 ~~kVLlatv~GD~HdiG~~iva~~L~~~G~eVi~LG~~vP~e~ 140 (579)
T 3bul_A 98 NGKMVIATVKGDVHDIGKNIVGVVLQCNNYEIVDLGVMVPAEK 140 (579)
T ss_dssp SCEEEEEEBTTCCCCHHHHHHHHHHHTTTCEEEECCSSBCHHH
T ss_pred CCeEEEEECCCCCchHHHHHHHHHHHHCCCEEEECCCCCCHHH
Confidence 5789999999999999999999999999999999877654433
No 88
>2r85_A PURP protein PF1517; ATP-grAsp superfamily, unknown function; HET: AMP; 1.70A {Pyrococcus furiosus} SCOP: c.30.1.8 d.142.1.9 PDB: 2r84_A* 2r86_A* 2r87_A*
Probab=73.15 E-value=4 Score=29.94 Aligned_cols=34 Identities=9% Similarity=0.139 Sum_probs=27.2
Q ss_pred CCCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCCC
Q 040291 2 NRPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDY 41 (160)
Q Consensus 2 ~~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~ 41 (160)
=+++|+++... ....+++++.++|++|.++.+..
T Consensus 1 m~m~Ililg~g------~~~~l~~a~~~~G~~v~~~~~~~ 34 (334)
T 2r85_A 1 MKVRIATYASH------SALQILKGAKDEGFETIAFGSSK 34 (334)
T ss_dssp CCSEEEEESST------THHHHHHHHHHTTCCEEEESCGG
T ss_pred CceEEEEECCh------hHHHHHHHHHhCCCEEEEEECCC
Confidence 05788888765 56789999999999999887654
No 89
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=73.00 E-value=4.3 Score=25.41 Aligned_cols=34 Identities=15% Similarity=0.384 Sum_probs=24.2
Q ss_pred CCCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCC
Q 040291 2 NRPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTD 40 (160)
Q Consensus 2 ~~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~ 40 (160)
+.++|+++- .|.+- ..+++.|.++|++|+++...
T Consensus 3 ~~m~i~IiG---~G~iG--~~~a~~L~~~g~~v~~~d~~ 36 (140)
T 1lss_A 3 HGMYIIIAG---IGRVG--YTLAKSLSEKGHDIVLIDID 36 (140)
T ss_dssp --CEEEEEC---CSHHH--HHHHHHHHHTTCEEEEEESC
T ss_pred CCCEEEEEC---CCHHH--HHHHHHHHhCCCeEEEEECC
Confidence 346888873 36553 35789999999999998654
No 90
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=72.92 E-value=2.9 Score=30.35 Aligned_cols=35 Identities=20% Similarity=0.198 Sum_probs=25.0
Q ss_pred CCCCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCC
Q 040291 1 MNRPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTD 40 (160)
Q Consensus 1 m~~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~ 40 (160)
|++++|+++-.+..| ..+++.|+++||+|+++...
T Consensus 1 ~~~m~i~iiG~G~~G-----~~~a~~l~~~g~~V~~~~r~ 35 (316)
T 2ew2_A 1 SNAMKIAIAGAGAMG-----SRLGIMLHQGGNDVTLIDQW 35 (316)
T ss_dssp ---CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSC
T ss_pred CCCCeEEEECcCHHH-----HHHHHHHHhCCCcEEEEECC
Confidence 445789888665555 35789999999999998653
No 91
>4fu0_A D-alanine--D-alanine ligase 7; vancomycin resistance, peptidoglycan synthesis, D-Ala:D-Ser ATP-grAsp domain; HET: ADP; 2.35A {Enterococcus faecalis}
Probab=72.23 E-value=2.5 Score=31.83 Aligned_cols=37 Identities=8% Similarity=0.117 Sum_probs=27.2
Q ss_pred CCCCeEEEEcCCCCC--C---hHHHHHHHHHHHhCCCEEEEEe
Q 040291 1 MNRPHVLVLPIPAQG--H---VIPLLEFSQCLAKQGFRVTFVN 38 (160)
Q Consensus 1 m~~~~i~~~~~p~~G--H---~~P~l~la~~L~~rGh~Vt~~~ 38 (160)
|++.||+++. +|.| | +..-..++++|.+.||+|..+.
T Consensus 1 M~kkkv~vl~-GG~S~E~evSl~Sa~~v~~aL~~~gy~v~~i~ 42 (357)
T 4fu0_A 1 MQNKKIAVIF-GGNSTEYEVSLQSASAVFENINTNKFDIIPIG 42 (357)
T ss_dssp -CCEEEEEEE-ECSSTTHHHHHHHHHHHHHHSCTTTEEEEEEE
T ss_pred CCCCEEEEEE-CCCccchHHHHHHHHHHHHHHhHhCCEEEEEE
Confidence 8999998885 4444 3 3445678899999999999873
No 92
>2r8r_A Sensor protein; KDPD, PFAM02702, MCSG, structural genomics, protein structure initiative, midwest center for structural genomics, kinase; 2.30A {Pseudomonas syringae PV}
Probab=72.09 E-value=7.3 Score=27.68 Aligned_cols=39 Identities=23% Similarity=0.322 Sum_probs=34.4
Q ss_pred CCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCCC
Q 040291 3 RPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDY 41 (160)
Q Consensus 3 ~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~ 41 (160)
+.+|++.--||.|=..-++.+|.+|+++|++|.++..+.
T Consensus 6 ~l~I~~~~kgGvGKTt~a~~la~~l~~~G~~V~v~d~D~ 44 (228)
T 2r8r_A 6 RLKVFLGAAPGVGKTYAMLQAAHAQLRQGVRVMAGVVET 44 (228)
T ss_dssp CEEEEEESSTTSSHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred eEEEEEECCCCCcHHHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 456888889999999999999999999999998877754
No 93
>3la6_A Tyrosine-protein kinase WZC; P-loop protein, nucleotide binding domain, walker A motif, B protein kinase, oligomerization; HET: ADP; 3.20A {Escherichia coli}
Probab=71.92 E-value=26 Score=25.45 Aligned_cols=39 Identities=18% Similarity=0.370 Sum_probs=31.0
Q ss_pred CeEEEEc--CCCCCChHHHHHHHHHHHhCCCEEEEEeCCCC
Q 040291 4 PHVLVLP--IPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYD 42 (160)
Q Consensus 4 ~~i~~~~--~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~~ 42 (160)
.++++++ -++.|=..-...||..|+++|.+|.++-.+..
T Consensus 92 ~kvI~vts~kgG~GKTtva~nLA~~lA~~G~rVLLID~D~~ 132 (286)
T 3la6_A 92 NNVLMMTGVSPSIGMTFVCANLAAVISQTNKRVLLIDCDMR 132 (286)
T ss_dssp CCEEEEEESSSSSSHHHHHHHHHHHHHTTTCCEEEEECCTT
T ss_pred CeEEEEECCCCCCcHHHHHHHHHHHHHhCCCCEEEEeccCC
Confidence 4555554 46778899999999999999999999876643
No 94
>3m6m_D Sensory/regulatory protein RPFC; RPFF, REC, enoyl-COA hydratase, lyase-transferase COMP; 2.50A {Xanthomonas campestris PV}
Probab=71.92 E-value=6 Score=24.92 Aligned_cols=32 Identities=19% Similarity=0.229 Sum_probs=21.7
Q ss_pred CCccEEEecCCCcc--HHHHHHHh---------CCccEEEccc
Q 040291 106 EKLDCFIADGYMAW--SMEVAKKM---------NVRGALFWPS 137 (160)
Q Consensus 106 ~~~d~vI~D~~~~~--~~~~A~~l---------giP~i~~~~~ 137 (160)
.+||+||.|...+. +..+.+++ .+|.+.+...
T Consensus 57 ~~~dlvl~D~~mp~~~g~~~~~~lr~~~~~~~~~~pii~~s~~ 99 (143)
T 3m6m_D 57 EDYDAVIVDLHMPGMNGLDMLKQLRVMQASGMRYTPVVVLSAD 99 (143)
T ss_dssp SCCSEEEEESCCSSSCHHHHHHHHHHHHHTTCCCCCEEEEESC
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHhchhccCCCCeEEEEeCC
Confidence 57999999987754 55555544 2677776553
No 95
>4dzz_A Plasmid partitioning protein PARF; deviant walker BOX, DNA segregation, unknown function; HET: ADP; 1.80A {Escherichia coli} PDB: 4e03_A* 4e07_A* 4e09_A*
Probab=71.45 E-value=20 Score=23.92 Aligned_cols=32 Identities=19% Similarity=0.484 Sum_probs=27.5
Q ss_pred CCCCCChHHHHHHHHHHHhCCCEEEEEeCCCC
Q 040291 11 IPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYD 42 (160)
Q Consensus 11 ~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~~ 42 (160)
-+|.|=..-...||..|+++|.+|.++-.+..
T Consensus 10 kgG~GKTt~a~~la~~la~~g~~vlliD~D~~ 41 (206)
T 4dzz_A 10 KGGSGKTTAVINIATALSRSGYNIAVVDTDPQ 41 (206)
T ss_dssp STTSSHHHHHHHHHHHHHHTTCCEEEEECCTT
T ss_pred CCCccHHHHHHHHHHHHHHCCCeEEEEECCCC
Confidence 56778889999999999999999999877643
No 96
>4gi5_A Quinone reductase; protein structure initiative, FAD bound, structural genomics, PSI-biology; HET: FAD; 1.75A {Klebsiella pneumoniae subsp}
Probab=71.17 E-value=9.4 Score=27.96 Aligned_cols=38 Identities=16% Similarity=0.128 Sum_probs=24.2
Q ss_pred CCCCeEEEEc-CCCCCChHH--HHHHHHHHHhCCCEEEEEe
Q 040291 1 MNRPHVLVLP-IPAQGHVIP--LLEFSQCLAKQGFRVTFVN 38 (160)
Q Consensus 1 m~~~~i~~~~-~p~~GH~~P--~l~la~~L~~rGh~Vt~~~ 38 (160)
|..+||+++- .|-..-++- .-.+.+.|.+.||+|+++-
T Consensus 20 m~~MKiLII~aHP~~~S~n~aL~~~~~~~l~~~G~eV~v~D 60 (280)
T 4gi5_A 20 FQSMKVLLIYAHPEPRSLNGALKNFAIRHLQQAGHEVQVSD 60 (280)
T ss_dssp --CCEEEEEECCSCTTSHHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred hhCCeEEEEEeCCCCccHHHHHHHHHHHHHHHCCCeEEEEE
Confidence 5677877554 565544433 2346778888999999864
No 97
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=70.24 E-value=9.1 Score=28.06 Aligned_cols=39 Identities=18% Similarity=0.206 Sum_probs=28.2
Q ss_pred CCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCCCChhhHH
Q 040291 3 RPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKRIM 47 (160)
Q Consensus 3 ~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~~~~~~~ 47 (160)
.++|+++-.++.|- .+|..|++.||+|+++.... .+.+.
T Consensus 2 ~mkI~IiGaGaiG~-----~~a~~L~~~g~~V~~~~r~~-~~~i~ 40 (312)
T 3hn2_A 2 SLRIAIVGAGALGL-----YYGALLQRSGEDVHFLLRRD-YEAIA 40 (312)
T ss_dssp --CEEEECCSTTHH-----HHHHHHHHTSCCEEEECSTT-HHHHH
T ss_pred CCEEEEECcCHHHH-----HHHHHHHHCCCeEEEEEcCc-HHHHH
Confidence 36888887777774 46889999999999988755 34443
No 98
>3f6p_A Transcriptional regulatory protein YYCF; unphosphorelated, receiver domain, cytoplasm, DNA-binding, phosphoprotein, transcription regulation; 1.95A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 2zwm_A
Probab=69.85 E-value=11 Score=22.78 Aligned_cols=41 Identities=17% Similarity=0.225 Sum_probs=25.7
Q ss_pred HHHHHHHhcCCCCCccEEEecCCCcc--HHHHHH----HhCCccEEEccc
Q 040291 94 EELIEDINSREDEKLDCFIADGYMAW--SMEVAK----KMNVRGALFWPS 137 (160)
Q Consensus 94 ~~ll~~l~~~~~~~~d~vI~D~~~~~--~~~~A~----~lgiP~i~~~~~ 137 (160)
++.++.+.+ .+||+||.|...+. +..+.+ ..++|.+.+...
T Consensus 36 ~~al~~~~~---~~~dlii~D~~~p~~~g~~~~~~lr~~~~~~ii~~t~~ 82 (120)
T 3f6p_A 36 NEAVEMVEE---LQPDLILLDIMLPNKDGVEVCREVRKKYDMPIIMLTAK 82 (120)
T ss_dssp HHHHHHHHT---TCCSEEEEETTSTTTHHHHHHHHHHTTCCSCEEEEEES
T ss_pred HHHHHHHhh---CCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCEEEEECC
Confidence 444444443 57999999987754 344443 346887777654
No 99
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=69.83 E-value=3.4 Score=29.83 Aligned_cols=32 Identities=31% Similarity=0.373 Sum_probs=23.1
Q ss_pred CeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeC
Q 040291 4 PHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNT 39 (160)
Q Consensus 4 ~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~ 39 (160)
|||++. ++.|-+- ..|+++|.++||+|+.++-
T Consensus 1 MkILVT--GatGfIG--~~L~~~L~~~G~~V~~l~R 32 (298)
T 4b4o_A 1 MRVLVG--GGTGFIG--TALTQLLNARGHEVTLVSR 32 (298)
T ss_dssp CEEEEE--TTTSHHH--HHHHHHHHHTTCEEEEEES
T ss_pred CEEEEE--CCCCHHH--HHHHHHHHHCCCEEEEEEC
Confidence 355544 4555554 4689999999999999864
No 100
>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}
Probab=69.35 E-value=4.5 Score=28.87 Aligned_cols=21 Identities=19% Similarity=0.373 Sum_probs=18.0
Q ss_pred HHHHHHHHhCCCEEEEEeCCC
Q 040291 21 LEFSQCLAKQGFRVTFVNTDY 41 (160)
Q Consensus 21 l~la~~L~~rGh~Vt~~~~~~ 41 (160)
..+|+++++||++|+++..+.
T Consensus 33 ~aiA~~~~~~Ga~V~lv~~~~ 53 (232)
T 2gk4_A 33 KIITETLLSAGYEVCLITTKR 53 (232)
T ss_dssp HHHHHHHHHTTCEEEEEECTT
T ss_pred HHHHHHHHHCCCEEEEEeCCc
Confidence 468999999999999998653
No 101
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=68.25 E-value=7.3 Score=25.22 Aligned_cols=33 Identities=12% Similarity=0.235 Sum_probs=24.4
Q ss_pred CCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCC
Q 040291 3 RPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTD 40 (160)
Q Consensus 3 ~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~ 40 (160)
..+|+++-. |.+- ..+++.|.++|++|+++...
T Consensus 19 ~~~v~IiG~---G~iG--~~la~~L~~~g~~V~vid~~ 51 (155)
T 2g1u_A 19 SKYIVIFGC---GRLG--SLIANLASSSGHSVVVVDKN 51 (155)
T ss_dssp CCEEEEECC---SHHH--HHHHHHHHHTTCEEEEEESC
T ss_pred CCcEEEECC---CHHH--HHHHHHHHhCCCeEEEEECC
Confidence 467888743 4443 45789999999999998764
No 102
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=68.12 E-value=3.8 Score=26.05 Aligned_cols=32 Identities=16% Similarity=0.131 Sum_probs=24.2
Q ss_pred CeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCC
Q 040291 4 PHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTD 40 (160)
Q Consensus 4 ~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~ 40 (160)
.|++++-. |.+ =..+++.|.++|++|+++-..
T Consensus 7 ~~v~I~G~---G~i--G~~la~~L~~~g~~V~~id~~ 38 (141)
T 3llv_A 7 YEYIVIGS---EAA--GVGLVRELTAAGKKVLAVDKS 38 (141)
T ss_dssp CSEEEECC---SHH--HHHHHHHHHHTTCCEEEEESC
T ss_pred CEEEEECC---CHH--HHHHHHHHHHCCCeEEEEECC
Confidence 57777754 443 357899999999999988664
No 103
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=68.10 E-value=4.4 Score=30.34 Aligned_cols=29 Identities=28% Similarity=0.360 Sum_probs=23.1
Q ss_pred CeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEE
Q 040291 4 PHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFV 37 (160)
Q Consensus 4 ~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~ 37 (160)
+||+|+-.+-.| +.+|..|+++|++|+++
T Consensus 2 m~V~IVGaGpaG-----l~~A~~L~~~G~~v~v~ 30 (412)
T 4hb9_A 2 MHVGIIGAGIGG-----TCLAHGLRKHGIKVTIY 30 (412)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHHTTCEEEEE
T ss_pred CEEEEECcCHHH-----HHHHHHHHhCCCCEEEE
Confidence 578877654445 67888999999999998
No 104
>1rw7_A YDR533CP; alpha-beta sandwich, DJ-1/THIJ/PFPI superfamily, unknown function; 1.80A {Saccharomyces cerevisiae} SCOP: c.23.16.2 PDB: 1qvv_A* 1qvz_A 1qvw_A
Probab=67.99 E-value=16 Score=25.70 Aligned_cols=41 Identities=27% Similarity=0.333 Sum_probs=28.1
Q ss_pred CCCCeEEEEcCCCCC-----------ChHHHHHHHHHHHhCCCEEEEEeCCC
Q 040291 1 MNRPHVLVLPIPAQG-----------HVIPLLEFSQCLAKQGFRVTFVNTDY 41 (160)
Q Consensus 1 m~~~~i~~~~~p~~G-----------H~~P~l~la~~L~~rGh~Vt~~~~~~ 41 (160)
|..++|+++-....+ ...=+......|.+.|++|+++++..
T Consensus 1 m~m~kvLivls~~~~~~~~~~~~~G~~~~E~~~p~~vl~~ag~~v~~~s~~g 52 (243)
T 1rw7_A 1 MAPKKVLLALTSYNDVFYSDGAKTGVFVVEALHPFNTFRKEGFEVDFVSETG 52 (243)
T ss_dssp -CCCEEEEECCCCCCBCSTTSCBCCBCHHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CCCceEEEEECCCCcccCCCCCCCccCHHHHHHHHHHHHHCCCEEEEECCCC
Confidence 555688877754221 23556666778888999999998754
No 105
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=67.94 E-value=7.1 Score=28.99 Aligned_cols=34 Identities=15% Similarity=0.224 Sum_probs=27.6
Q ss_pred CCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCC
Q 040291 3 RPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTD 40 (160)
Q Consensus 3 ~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~ 40 (160)
.+||.++-.++.| |-.+|+.|.++|++|+..=..
T Consensus 4 ~~~i~~iGiGg~G----ms~~A~~L~~~G~~V~~~D~~ 37 (326)
T 3eag_A 4 MKHIHIIGIGGTF----MGGLAAIAKEAGFEVSGCDAK 37 (326)
T ss_dssp CCEEEEESCCSHH----HHHHHHHHHHTTCEEEEEESS
T ss_pred CcEEEEEEECHHH----HHHHHHHHHhCCCEEEEEcCC
Confidence 4678888888877 557999999999999986543
No 106
>3mc3_A DSRE/DSRF-like family protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.49A {Sulfolobus solfataricus}
Probab=67.54 E-value=11 Score=24.02 Aligned_cols=40 Identities=8% Similarity=0.044 Sum_probs=29.0
Q ss_pred CeEEEEcCCC---CCChHHHHHHHHHHHhCCCEEEEEeCCCCh
Q 040291 4 PHVLVLPIPA---QGHVIPLLEFSQCLAKQGFRVTFVNTDYDH 43 (160)
Q Consensus 4 ~~i~~~~~p~---~GH~~P~l~la~~L~~rGh~Vt~~~~~~~~ 43 (160)
.+++++-..+ ......-+.+|...++.||+|+++-+.+-.
T Consensus 16 ~kl~ii~~sgP~~~~~~~~al~lA~~A~a~g~eV~vFf~~dGV 58 (134)
T 3mc3_A 16 XXILIVVTHGPEDLDRTYAPLFMASISASMEYETSVFFMIXGP 58 (134)
T ss_dssp CEEEEEECCCGGGTHHHHHHHHHHHHHHHTTCEEEEEECTTGG
T ss_pred ceEEEEEccCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEeCcH
Confidence 4555544333 456678888999999999999998776543
No 107
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=67.31 E-value=15 Score=24.35 Aligned_cols=36 Identities=22% Similarity=0.303 Sum_probs=25.3
Q ss_pred CCCCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCC
Q 040291 1 MNRPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTD 40 (160)
Q Consensus 1 m~~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~ 40 (160)
|..++|+++ ++.|-+ =..++++|.++|++|+.+.-.
T Consensus 1 M~~~~ilVt--GatG~i--G~~l~~~l~~~g~~V~~~~r~ 36 (206)
T 1hdo_A 1 MAVKKIAIF--GATGQT--GLTTLAQAVQAGYEVTVLVRD 36 (206)
T ss_dssp CCCCEEEEE--STTSHH--HHHHHHHHHHTTCEEEEEESC
T ss_pred CCCCEEEEE--cCCcHH--HHHHHHHHHHCCCeEEEEEeC
Confidence 655666655 344433 357889999999999988654
No 108
>2xj4_A MIPZ; replication, cell division, ATPase, WACA; 1.60A {Caulobacter vibrioides} PDB: 2xj9_A* 2xit_A
Probab=67.22 E-value=8.1 Score=27.91 Aligned_cols=41 Identities=20% Similarity=0.298 Sum_probs=30.6
Q ss_pred CCCCeEEEEc--CCCCCChHHHHHHHHHHHhCCCEEEEEeCCC
Q 040291 1 MNRPHVLVLP--IPAQGHVIPLLEFSQCLAKQGFRVTFVNTDY 41 (160)
Q Consensus 1 m~~~~i~~~~--~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~ 41 (160)
|..+++..+. -+|.|=..-...||..|+++|.+|.++=.+.
T Consensus 1 M~M~kvI~v~s~KGGvGKTT~a~nLA~~La~~G~~VlliD~D~ 43 (286)
T 2xj4_A 1 MAETRVIVVGNEKGGAGKSTIAVHLVTALLYGGAKVAVIDLDL 43 (286)
T ss_dssp ---CEEEEECCSSSCTTHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred CCCCeEEEEEcCCCCCCHHHHHHHHHHHHHHCCCcEEEEECCC
Confidence 5556555554 4677888999999999999999999886655
No 109
>3lyu_A Putative hydrogenase; the C-terminal has AN alpha-beta fold, structural genomics, PSI-2, protein structure initiative; 2.30A {Pyrococcus furiosus}
Probab=67.10 E-value=4.3 Score=26.29 Aligned_cols=35 Identities=11% Similarity=0.166 Sum_probs=26.8
Q ss_pred CeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCCC
Q 040291 4 PHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDY 41 (160)
Q Consensus 4 ~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~ 41 (160)
.+++++. +|. =+.|++.+++.|.++|.+|+++ ...
T Consensus 19 ~~~llIa-GG~-GiaPl~sm~~~l~~~~~~v~l~-g~R 53 (142)
T 3lyu_A 19 GKILAIG-AYT-GIVEVYPIAKAWQEIGNDVTTL-HVT 53 (142)
T ss_dssp SEEEEEE-ETT-HHHHHHHHHHHHHHTTCEEEEE-EEE
T ss_pred CeEEEEE-CcC-cHHHHHHHHHHHHhcCCcEEEE-EeC
Confidence 4566665 222 4899999999999999999998 543
No 110
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=66.62 E-value=5.8 Score=27.14 Aligned_cols=36 Identities=25% Similarity=0.355 Sum_probs=23.6
Q ss_pred CCC-CeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCC
Q 040291 1 MNR-PHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTD 40 (160)
Q Consensus 1 m~~-~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~ 40 (160)
|.+ ++|+++ ++.|.+- ..++++|.++|++|+.+.-.
T Consensus 1 M~~m~~ilIt--GatG~iG--~~l~~~L~~~g~~V~~~~r~ 37 (227)
T 3dhn_A 1 MEKVKKIVLI--GASGFVG--SALLNEALNRGFEVTAVVRH 37 (227)
T ss_dssp --CCCEEEEE--TCCHHHH--HHHHHHHHTTTCEEEEECSC
T ss_pred CCCCCEEEEE--cCCchHH--HHHHHHHHHCCCEEEEEEcC
Confidence 654 455554 4445443 57899999999999987654
No 111
>2vrn_A Protease I, DR1199; cysteine sulfenic acid, DJ-1/THIJ/PFPI superfamily, protease hydrolase, stress response; 2.15A {Deinococcus radiodurans}
Probab=66.05 E-value=23 Score=23.65 Aligned_cols=40 Identities=10% Similarity=0.141 Sum_probs=30.1
Q ss_pred CCCCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCCC
Q 040291 1 MNRPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDY 41 (160)
Q Consensus 1 m~~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~ 41 (160)
|+..+|+++-+++.. ..-+......|.+.|++|++++...
T Consensus 7 ~~~~~v~il~~~g~~-~~e~~~~~~~l~~ag~~v~~vs~~~ 46 (190)
T 2vrn_A 7 LTGKKIAILAADGVE-EIELTSPRAAIEAAGGTTELISLEP 46 (190)
T ss_dssp CTTCEEEEECCTTCB-HHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CCCCEEEEEeCCCCC-HHHHHHHHHHHHHCCCEEEEEecCC
Confidence 456789998876654 3455666778888999999998765
No 112
>3pdi_B Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=65.82 E-value=6 Score=31.07 Aligned_cols=26 Identities=12% Similarity=0.160 Sum_probs=21.8
Q ss_pred CCccEEEecCCCccHHHHHHHhCCccEEE
Q 040291 106 EKLDCFIADGYMAWSMEVAKKMNVRGALF 134 (160)
Q Consensus 106 ~~~d~vI~D~~~~~~~~~A~~lgiP~i~~ 134 (160)
.++|++|.. +....+|+++|||++.+
T Consensus 374 ~~pDllig~---~~~~~~a~k~gip~~~~ 399 (458)
T 3pdi_B 374 GQAQLVIGN---SHALASARRLGVPLLRA 399 (458)
T ss_dssp HTCSEEEEC---TTHHHHHHHTTCCEEEC
T ss_pred cCCCEEEEC---hhHHHHHHHcCCCEEEe
Confidence 479999987 44778999999999965
No 113
>1ehi_A LMDDL2, D-alanine:D-lactate ligase; ATP-binding. grAsp motif for ATP.; HET: ADP PHY; 2.38A {Leuconostoc mesenteroides} SCOP: c.30.1.2 d.142.1.1
Probab=65.82 E-value=7.7 Score=29.36 Aligned_cols=39 Identities=13% Similarity=0.189 Sum_probs=28.1
Q ss_pred CCCCeEEEEcCCCCC-C---hHHHHHHHHHH-HhCCCEEEEEeC
Q 040291 1 MNRPHVLVLPIPAQG-H---VIPLLEFSQCL-AKQGFRVTFVNT 39 (160)
Q Consensus 1 m~~~~i~~~~~p~~G-H---~~P~l~la~~L-~~rGh~Vt~~~~ 39 (160)
|.++||+++..+..+ | +..-..++++| .++||+|+.+..
T Consensus 1 m~k~~v~vl~gG~s~E~~vSl~s~~~v~~al~~~~g~~v~~i~~ 44 (377)
T 1ehi_A 1 MTKKRVALIFGGNSSEHDVSKRSAQNFYNAIEATGKYEIIVFAI 44 (377)
T ss_dssp --CEEEEEEEECSSTTHHHHHHHHHHHHHHHHHHSSEEEEEEEE
T ss_pred CCCcEEEEEeCCCCCCcceeHHHHHHHHHHhCcccCcEEEEEEE
Confidence 778899988744333 2 34578899999 999999999854
No 114
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=64.67 E-value=11 Score=27.82 Aligned_cols=33 Identities=18% Similarity=0.334 Sum_probs=26.2
Q ss_pred CCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCC
Q 040291 3 RPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTD 40 (160)
Q Consensus 3 ~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~ 40 (160)
.++|.++-.+..| ..+++.|+++||+|+++...
T Consensus 31 ~~~I~iIG~G~mG-----~~~a~~l~~~G~~V~~~dr~ 63 (320)
T 4dll_A 31 ARKITFLGTGSMG-----LPMARRLCEAGYALQVWNRT 63 (320)
T ss_dssp CSEEEEECCTTTH-----HHHHHHHHHTTCEEEEECSC
T ss_pred CCEEEEECccHHH-----HHHHHHHHhCCCeEEEEcCC
Confidence 3589999776666 56889999999999987543
No 115
>1pno_A NAD(P) transhydrogenase subunit beta; nucleotide binding fold, oxidoreductase; HET: NAP; 2.10A {Rhodospirillum rubrum} SCOP: c.31.1.4 PDB: 1pnq_A* 1xlt_C* 2oor_C* 1ptj_C* 2oo5_C*
Probab=64.58 E-value=9.2 Score=25.90 Aligned_cols=39 Identities=21% Similarity=0.306 Sum_probs=29.6
Q ss_pred CCeEEEEcCCCC---CChHHHHHHHHHHHhCCCEEEEEeCCC
Q 040291 3 RPHVLVLPIPAQ---GHVIPLLEFSQCLAKQGFRVTFVNTDY 41 (160)
Q Consensus 3 ~~~i~~~~~p~~---GH~~P~l~la~~L~~rGh~Vt~~~~~~ 41 (160)
..+|+++|.=+. -=..+..+|++.|.++|.+|.|.+++-
T Consensus 23 A~~ViIvPGYGmAvAqAQ~~v~el~~~L~~~G~~V~faIHPV 64 (180)
T 1pno_A 23 ASKVIIVPGYGMAVAQAQHALREMADVLKKEGVEVSYAIHPV 64 (180)
T ss_dssp CSEEEEEECHHHHHHTCHHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred CCeEEEECChHHHHHHHHHHHHHHHHHHHHCCCeEEEEeccc
Confidence 456777763322 134789999999999999999998873
No 116
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=64.53 E-value=3.5 Score=28.69 Aligned_cols=35 Identities=9% Similarity=0.115 Sum_probs=25.6
Q ss_pred CCCCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCC
Q 040291 1 MNRPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTD 40 (160)
Q Consensus 1 m~~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~ 40 (160)
|+.++|.++-.+..| ..+++.|+++||+|+++...
T Consensus 21 m~mmkI~IIG~G~mG-----~~la~~l~~~g~~V~~v~~r 55 (220)
T 4huj_A 21 QSMTTYAIIGAGAIG-----SALAERFTAAQIPAIIANSR 55 (220)
T ss_dssp GGSCCEEEEECHHHH-----HHHHHHHHHTTCCEEEECTT
T ss_pred hcCCEEEEECCCHHH-----HHHHHHHHhCCCEEEEEECC
Confidence 445688888655444 46889999999999985544
No 117
>3zzm_A Bifunctional purine biosynthesis protein PURH; transferase, hydrolase; HET: JLN; 2.20A {Mycobacterium tuberculosis} PDB: 4a1o_A*
Probab=64.45 E-value=37 Score=27.17 Aligned_cols=49 Identities=16% Similarity=0.263 Sum_probs=33.6
Q ss_pred CeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCCCChhhHHhhhccCCCCCCCeeeeecC
Q 040291 4 PHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKRIMESLEGKNDLGEQIRLVSIP 66 (160)
Q Consensus 4 ~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~ 66 (160)
.+-++++. ++-.-+.++++.|.+.|+++. +|.+..+.+.. .|+....+.
T Consensus 10 i~~aLISV---sDK~glvelAk~L~~lGfeI~--ATgGTak~L~e---------~GI~v~~V~ 58 (523)
T 3zzm_A 10 IRRALISV---YDKTGLVDLAQGLSAAGVEII--STGSTAKTIAD---------TGIPVTPVE 58 (523)
T ss_dssp CCEEEEEE---SSCTTHHHHHHHHHHTTCEEE--ECHHHHHHHHT---------TTCCCEEHH
T ss_pred ccEEEEEE---eccccHHHHHHHHHHCCCEEE--EcchHHHHHHH---------cCCceeecc
Confidence 34455554 455668899999999998875 77766666654 467766554
No 118
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=64.10 E-value=5.8 Score=30.12 Aligned_cols=36 Identities=17% Similarity=0.253 Sum_probs=26.9
Q ss_pred CCCCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCCC
Q 040291 1 MNRPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDY 41 (160)
Q Consensus 1 m~~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~ 41 (160)
|++.+|+++-.+.. =+..|..|+++|++|+++-...
T Consensus 1 m~~~~v~iiG~G~~-----Gl~~A~~l~~~g~~v~v~E~~~ 36 (384)
T 2bi7_A 1 MKSKKILIVGAGFS-----GAVIGRQLAEKGHQVHIIDQRD 36 (384)
T ss_dssp -CCCEEEEECCSHH-----HHHHHHHHHTTTCEEEEEESSS
T ss_pred CCcCCEEEECcCHH-----HHHHHHHHHHCCCcEEEEEecC
Confidence 77788888865543 3567889999999999986543
No 119
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=64.02 E-value=4.4 Score=27.64 Aligned_cols=18 Identities=28% Similarity=0.475 Sum_probs=15.9
Q ss_pred HHHHHHHHhCCCEEEEEe
Q 040291 21 LEFSQCLAKQGFRVTFVN 38 (160)
Q Consensus 21 l~la~~L~~rGh~Vt~~~ 38 (160)
+.+|..|+++|++|+++=
T Consensus 15 L~aA~~La~~G~~V~v~E 32 (336)
T 3kkj_A 15 LSAAQALTAAGHQVHLFD 32 (336)
T ss_dssp HHHHHHHHHTTCCEEEEC
T ss_pred HHHHHHHHHCCCCEEEEE
Confidence 678899999999999973
No 120
>1d4o_A NADP(H) transhydrogenase; nucleotide-binding fold, protein-NADP(H) complex, inverted binding of NADP(H), oxidoreductase; HET: NAP; 1.21A {Bos taurus} SCOP: c.31.1.4
Probab=64.02 E-value=9.5 Score=25.92 Aligned_cols=39 Identities=18% Similarity=0.269 Sum_probs=29.5
Q ss_pred CCeEEEEcCCCC---CChHHHHHHHHHHHhCCCEEEEEeCCC
Q 040291 3 RPHVLVLPIPAQ---GHVIPLLEFSQCLAKQGFRVTFVNTDY 41 (160)
Q Consensus 3 ~~~i~~~~~p~~---GH~~P~l~la~~L~~rGh~Vt~~~~~~ 41 (160)
..+|+++|.=|. -=..+..+|++.|.++|.+|.|.+++-
T Consensus 22 A~~ViIvPGYGmAvAqAQ~~v~el~~~L~~~G~~V~faIHPV 63 (184)
T 1d4o_A 22 ANSIIITPGYGLCAAKAQYPIADLVKMLSEQGKKVRFGIHPV 63 (184)
T ss_dssp CSEEEEEECHHHHHTTTHHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred CCeEEEECChHHHHHHHHHHHHHHHHHHHHCCCeEEEEeccc
Confidence 456777763321 234799999999999999999998873
No 121
>3q0i_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; 1.89A {Vibrio cholerae}
Probab=63.50 E-value=16 Score=27.18 Aligned_cols=35 Identities=11% Similarity=0.067 Sum_probs=24.7
Q ss_pred CCCCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCC
Q 040291 1 MNRPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTD 40 (160)
Q Consensus 1 m~~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~ 40 (160)
|+++||+++-.|. ...+..++|.++||+|..+.+.
T Consensus 5 ~~~mrivf~Gt~~-----fa~~~L~~L~~~~~~v~~Vvt~ 39 (318)
T 3q0i_A 5 SQSLRIVFAGTPD-----FAARHLAALLSSEHEIIAVYTQ 39 (318)
T ss_dssp --CCEEEEECCSH-----HHHHHHHHHHTSSSEEEEEECC
T ss_pred ccCCEEEEEecCH-----HHHHHHHHHHHCCCcEEEEEcC
Confidence 5678999987663 2345567888899999887764
No 122
>1vi6_A 30S ribosomal protein S2P; structural genomics, ribosome; 1.95A {Archaeoglobus fulgidus} SCOP: c.23.15.1 PDB: 1vi5_A
Probab=63.46 E-value=6.7 Score=27.52 Aligned_cols=30 Identities=7% Similarity=0.069 Sum_probs=22.7
Q ss_pred CccEEE-ecCCCc-cHHHHHHHhCCccEEEcc
Q 040291 107 KLDCFI-ADGYMA-WSMEVAKKMNVRGALFWP 136 (160)
Q Consensus 107 ~~d~vI-~D~~~~-~~~~~A~~lgiP~i~~~~ 136 (160)
.||++| .|+-.- -+..-|.++|||.|.+.-
T Consensus 115 ~PdlliV~Dp~~e~~ai~EA~~l~IPvIalvD 146 (208)
T 1vi6_A 115 EPEVVFVNDPAIDKQAVSEATAVGIPVVALCD 146 (208)
T ss_dssp CCSEEEESCTTTTHHHHHHHHHTTCCEEEEEC
T ss_pred CCCEEEEECCCcchhHHHHHHHhCCCEEEEeC
Confidence 578655 888653 356679999999999853
No 123
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=63.35 E-value=5.1 Score=25.58 Aligned_cols=34 Identities=15% Similarity=0.173 Sum_probs=25.5
Q ss_pred CCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCCC
Q 040291 3 RPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDY 41 (160)
Q Consensus 3 ~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~ 41 (160)
+.|++++-++..| ..+++.|.++|++|+++....
T Consensus 7 ~~~viIiG~G~~G-----~~la~~L~~~g~~v~vid~~~ 40 (140)
T 3fwz_A 7 CNHALLVGYGRVG-----SLLGEKLLASDIPLVVIETSR 40 (140)
T ss_dssp CSCEEEECCSHHH-----HHHHHHHHHTTCCEEEEESCH
T ss_pred CCCEEEECcCHHH-----HHHHHHHHHCCCCEEEEECCH
Confidence 3577777654333 478999999999999988754
No 124
>3gt7_A Sensor protein; structural genomics, signal receiver domain, kinase, PSI-2, protein structure initiative; 2.30A {Syntrophus aciditrophicus SB}
Probab=63.14 E-value=16 Score=23.16 Aligned_cols=40 Identities=15% Similarity=0.112 Sum_probs=24.5
Q ss_pred HHHHHHHhcCCCCCccEEEecCCCcc--HHHHHHH-------hCCccEEEcc
Q 040291 94 EELIEDINSREDEKLDCFIADGYMAW--SMEVAKK-------MNVRGALFWP 136 (160)
Q Consensus 94 ~~ll~~l~~~~~~~~d~vI~D~~~~~--~~~~A~~-------lgiP~i~~~~ 136 (160)
++.++.+.+ .+||+||.|...+. +..+.++ -++|.+.+..
T Consensus 41 ~~al~~l~~---~~~dlii~D~~l~~~~g~~~~~~lr~~~~~~~~pii~~s~ 89 (154)
T 3gt7_A 41 REAVRFLSL---TRPDLIISDVLMPEMDGYALCRWLKGQPDLRTIPVILLTI 89 (154)
T ss_dssp HHHHHHHTT---CCCSEEEEESCCSSSCHHHHHHHHHHSTTTTTSCEEEEEC
T ss_pred HHHHHHHHh---CCCCEEEEeCCCCCCCHHHHHHHHHhCCCcCCCCEEEEEC
Confidence 444555443 57999999986643 4444433 3578777654
No 125
>2pn1_A Carbamoylphosphate synthase large subunit; ZP_00538348.1, ATP-grAsp domain, carbamoylphosphate synthase subunit (split gene in MJ); 2.00A {Exiguobacterium sibiricum}
Probab=62.93 E-value=14 Score=27.02 Aligned_cols=35 Identities=20% Similarity=0.357 Sum_probs=25.9
Q ss_pred CCCCeEEEEcCCCCCChHHHHHHHHHHHhC-C-CEEEEEeCCC
Q 040291 1 MNRPHVLVLPIPAQGHVIPLLEFSQCLAKQ-G-FRVTFVNTDY 41 (160)
Q Consensus 1 m~~~~i~~~~~p~~GH~~P~l~la~~L~~r-G-h~Vt~~~~~~ 41 (160)
|++++|+++..+.. .++++.|.+. | ++|..+....
T Consensus 2 m~~~~Ili~g~g~~------~~l~~~l~~~~~~~~v~~~d~~~ 38 (331)
T 2pn1_A 2 MQKPHLLITSAGRR------AKLVEYFVKEFKTGRVSTADCSP 38 (331)
T ss_dssp TTCCEEEEESCTTC------HHHHHHHHHHCCSSEEEEEESCT
T ss_pred CccceEEEecCCch------HHHHHHHHHhcCCCEEEEEeCCC
Confidence 78899999854443 4789999876 6 8887775543
No 126
>2bw0_A 10-FTHFDH, 10-formyltetrahydrofolate dehydrogenase; nucleotide biosynthesis, oxidoreductase; 1.7A {Homo sapiens} SCOP: b.46.1.1 c.65.1.1 PDB: 2cfi_A* 1s3i_A
Probab=62.74 E-value=14 Score=27.62 Aligned_cols=34 Identities=24% Similarity=0.142 Sum_probs=23.6
Q ss_pred CCCCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeC
Q 040291 1 MNRPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNT 39 (160)
Q Consensus 1 m~~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~ 39 (160)
|.++||+++- --+-...+.++|.++||+|..+.+
T Consensus 20 ~~~mrIvf~G-----~~~fa~~~L~~L~~~~~~i~~Vvt 53 (329)
T 2bw0_A 20 FQSMKIAVIG-----QSLFGQEVYCHLRKEGHEVVGVFT 53 (329)
T ss_dssp -CCCEEEEEC-----CHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred CCCCEEEEEc-----CcHHHHHHHHHHHHCCCeEEEEEe
Confidence 4568999982 223334567889999999987765
No 127
>2fsv_C NAD(P) transhydrogenase subunit beta; NAD(P) transhydrogenase subunits, oxidoreductas; HET: NAD NAP; 2.30A {Rhodospirillum rubrum} SCOP: c.31.1.4 PDB: 1e3t_A* 1hzz_C* 1nm5_C* 1u28_C* 1u2d_C* 1u2g_C* 2fr8_C* 2frd_C*
Probab=62.66 E-value=10 Score=26.27 Aligned_cols=39 Identities=21% Similarity=0.306 Sum_probs=29.1
Q ss_pred CCeEEEEcCCCC---CChHHHHHHHHHHHhCCCEEEEEeCCC
Q 040291 3 RPHVLVLPIPAQ---GHVIPLLEFSQCLAKQGFRVTFVNTDY 41 (160)
Q Consensus 3 ~~~i~~~~~p~~---GH~~P~l~la~~L~~rGh~Vt~~~~~~ 41 (160)
..+|+++|.-+. -=..+..+|++.|.++|.+|.|.+++-
T Consensus 46 A~~ViIVPGYGmAVAqAQ~~v~el~~~L~~~G~~V~faIHPV 87 (203)
T 2fsv_C 46 ASKVIIVPGYGMAVAQAQHALREMADVLKKEGVEVSYAIHPV 87 (203)
T ss_dssp CSEEEEEECHHHHHHTCHHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred CCcEEEEcCchHhHHHHHHHHHHHHHHHHHcCCeEEEEeccc
Confidence 356777763221 124788999999999999999998873
No 128
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=62.56 E-value=7.6 Score=28.10 Aligned_cols=35 Identities=26% Similarity=0.235 Sum_probs=26.2
Q ss_pred CCCCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCC
Q 040291 1 MNRPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTD 40 (160)
Q Consensus 1 m~~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~ 40 (160)
|+..+|+++-.+..| ..+|+.|+++|++|+++...
T Consensus 2 m~~~kV~VIGaG~mG-----~~iA~~la~~G~~V~l~d~~ 36 (283)
T 4e12_A 2 TGITNVTVLGTGVLG-----SQIAFQTAFHGFAVTAYDIN 36 (283)
T ss_dssp CSCCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSS
T ss_pred CCCCEEEEECCCHHH-----HHHHHHHHhCCCeEEEEeCC
Confidence 455788888554444 46889999999999997554
No 129
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=62.48 E-value=7.3 Score=28.70 Aligned_cols=39 Identities=26% Similarity=0.311 Sum_probs=28.3
Q ss_pred CCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCCCChhhHH
Q 040291 3 RPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKRIM 47 (160)
Q Consensus 3 ~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~~~~~~~ 47 (160)
+++|+++-.++.|- .+|..|++.||+|+++.... .+.+.
T Consensus 2 ~mkI~IiGaGaiG~-----~~a~~L~~~g~~V~~~~r~~-~~~i~ 40 (320)
T 3i83_A 2 SLNILVIGTGAIGS-----FYGALLAKTGHCVSVVSRSD-YETVK 40 (320)
T ss_dssp -CEEEEESCCHHHH-----HHHHHHHHTTCEEEEECSTT-HHHHH
T ss_pred CCEEEEECcCHHHH-----HHHHHHHhCCCeEEEEeCCh-HHHHH
Confidence 36888886666663 57889999999999988765 34443
No 130
>1dbw_A Transcriptional regulatory protein FIXJ; doubly wound five-stranded beta/alpha fold, nitrogen fixatio regulation; HET: 15P; 1.60A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1dck_A* 1dcm_A 1d5w_A*
Probab=62.39 E-value=19 Score=21.62 Aligned_cols=41 Identities=12% Similarity=0.163 Sum_probs=24.6
Q ss_pred HHHHHHHhcCCCCCccEEEecCCCcc--HHHHHHHh-----CCccEEEccc
Q 040291 94 EELIEDINSREDEKLDCFIADGYMAW--SMEVAKKM-----NVRGALFWPS 137 (160)
Q Consensus 94 ~~ll~~l~~~~~~~~d~vI~D~~~~~--~~~~A~~l-----giP~i~~~~~ 137 (160)
++.++.+.. .+||++|.|...+. +..+.+++ ++|.+.+...
T Consensus 37 ~~~~~~~~~---~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~ 84 (126)
T 1dbw_A 37 EAFLAFAPD---VRNGVLVTDLRMPDMSGVELLRNLGDLKINIPSIVITGH 84 (126)
T ss_dssp HHHHHHGGG---CCSEEEEEECCSTTSCHHHHHHHHHHTTCCCCEEEEECT
T ss_pred HHHHHHHhc---CCCCEEEEECCCCCCCHHHHHHHHHhcCCCCCEEEEECC
Confidence 344444433 47899999986643 44444433 5777776554
No 131
>1jx7_A Hypothetical protein YCHN; NEW fold, hexamer, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; 2.80A {Escherichia coli} SCOP: c.114.1.1
Probab=62.25 E-value=9.6 Score=23.26 Aligned_cols=29 Identities=10% Similarity=0.056 Sum_probs=23.1
Q ss_pred CChHHHHHHHHHHHhC-CC-EEEEEeCCCCh
Q 040291 15 GHVIPLLEFSQCLAKQ-GF-RVTFVNTDYDH 43 (160)
Q Consensus 15 GH~~P~l~la~~L~~r-Gh-~Vt~~~~~~~~ 43 (160)
......+.+|..+++. || +|+++-..+-.
T Consensus 16 ~~~~~al~~a~~~~~~~g~~~v~vff~~dgV 46 (117)
T 1jx7_A 16 ESLFNSLRLAIALREQESNLDLRLFLMSDAV 46 (117)
T ss_dssp SHHHHHHHHHHHHHHHCTTCEEEEEECGGGG
T ss_pred HHHHHHHHHHHHHHhcCCCccEEEEEEchHH
Confidence 4456779999999999 99 99998776543
No 132
>3c3m_A Response regulator receiver protein; structural genomics, unknown function, PSI-2, protein struct initiative; HET: MSE; 1.70A {Methanoculleus marisnigri JR1}
Probab=62.15 E-value=17 Score=22.39 Aligned_cols=32 Identities=13% Similarity=0.117 Sum_probs=20.5
Q ss_pred CCccEEEecCCCcc--HHHHHHHh-------CCccEEEccc
Q 040291 106 EKLDCFIADGYMAW--SMEVAKKM-------NVRGALFWPS 137 (160)
Q Consensus 106 ~~~d~vI~D~~~~~--~~~~A~~l-------giP~i~~~~~ 137 (160)
.+||+||.|...+. +..+.+++ ++|.+.+...
T Consensus 46 ~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~ls~~ 86 (138)
T 3c3m_A 46 TPPDLVLLDIMMEPMDGWETLERIKTDPATRDIPVLMLTAK 86 (138)
T ss_dssp SCCSEEEEESCCSSSCHHHHHHHHHHSTTTTTSCEEEEESS
T ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHcCcccCCCCEEEEECC
Confidence 46899999987643 44444433 4777776543
No 133
>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1
Probab=62.06 E-value=6.2 Score=29.46 Aligned_cols=22 Identities=14% Similarity=0.271 Sum_probs=18.7
Q ss_pred HHHHHHHHhCCCEEEEEeCCCC
Q 040291 21 LEFSQCLAKQGFRVTFVNTDYD 42 (160)
Q Consensus 21 l~la~~L~~rGh~Vt~~~~~~~ 42 (160)
..+|+++.+||++||+++.+..
T Consensus 69 ~aiAe~~~~~Ga~V~lv~g~~s 90 (313)
T 1p9o_A 69 ATSAEAFLAAGYGVLFLYRARS 90 (313)
T ss_dssp HHHHHHHHHTTCEEEEEEETTS
T ss_pred HHHHHHHHHCCCEEEEEecCCC
Confidence 4688999999999999987654
No 134
>3grc_A Sensor protein, kinase; protein structure initiative II(PSI II), NYSGXRC, 11025B, structural genomics; 2.21A {Polaromonas SP}
Probab=61.98 E-value=21 Score=21.89 Aligned_cols=42 Identities=5% Similarity=0.097 Sum_probs=25.5
Q ss_pred HHHHHHHhcCCCCCccEEEecCCCcc--HHHHHHH-------hCCccEEEccch
Q 040291 94 EELIEDINSREDEKLDCFIADGYMAW--SMEVAKK-------MNVRGALFWPSS 138 (160)
Q Consensus 94 ~~ll~~l~~~~~~~~d~vI~D~~~~~--~~~~A~~-------lgiP~i~~~~~~ 138 (160)
++.++.+.+ .+||+||.|...+. +..+.++ -++|.+.+....
T Consensus 40 ~~a~~~l~~---~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~~ 90 (140)
T 3grc_A 40 AQALEQVAR---RPYAAMTVDLNLPDQDGVSLIRALRRDSRTRDLAIVVVSANA 90 (140)
T ss_dssp HHHHHHHHH---SCCSEEEECSCCSSSCHHHHHHHHHTSGGGTTCEEEEECTTH
T ss_pred HHHHHHHHh---CCCCEEEEeCCCCCCCHHHHHHHHHhCcccCCCCEEEEecCC
Confidence 444444443 57999999987643 4444433 257777776544
No 135
>1iow_A DD-ligase, DDLB, D-ALA\:D-Ala ligase; glycogen phosphorylase, cell WALL, peptidoglycan synthesis, vancomycin, ADP binding; HET: ADP PHY; 1.90A {Escherichia coli} SCOP: c.30.1.2 d.142.1.1 PDB: 1iov_A* 2dln_A* 3v4z_A*
Probab=61.95 E-value=21 Score=25.57 Aligned_cols=40 Identities=13% Similarity=-0.001 Sum_probs=27.5
Q ss_pred CCCeEEEEcCCCC-CChH---HHHHHHHHHHhCCCEEEEEeCCC
Q 040291 2 NRPHVLVLPIPAQ-GHVI---PLLEFSQCLAKQGFRVTFVNTDY 41 (160)
Q Consensus 2 ~~~~i~~~~~p~~-GH~~---P~l~la~~L~~rGh~Vt~~~~~~ 41 (160)
=+++|+++..+.. -|-. ....++++|.++||+|.++....
T Consensus 1 m~~~i~il~gg~s~e~~~s~~~~~~l~~al~~~G~~v~~~~~~~ 44 (306)
T 1iow_A 1 MTDKIAVLLGGTSAEREVSLNSGAAVLAGLREGGIDAYPVDPKE 44 (306)
T ss_dssp CCCEEEEECCCSSTTHHHHHHHHHHHHHHHHHTTCEEEEECTTT
T ss_pred CCcEEEEEeCCCCccceEcHHhHHHHHHHHHHCCCeEEEEecCc
Confidence 0468888874322 2222 34689999999999999987764
No 136
>3bch_A 40S ribosomal protein SA; laminin receptor, P40 ribosomal protein, acetylation, cytoplasm, phosphorylation, polymorphism; 2.15A {Homo sapiens}
Probab=61.84 E-value=7.3 Score=28.19 Aligned_cols=29 Identities=10% Similarity=0.073 Sum_probs=22.5
Q ss_pred CccEEE-ecCCCc-cHHHHHHHhCCccEEEc
Q 040291 107 KLDCFI-ADGYMA-WSMEVAKKMNVRGALFW 135 (160)
Q Consensus 107 ~~d~vI-~D~~~~-~~~~~A~~lgiP~i~~~ 135 (160)
.||+|| .|+-.- -+..-|.++|||.|.+.
T Consensus 151 ~PdlliV~Dp~~e~~AI~EA~~lgIPvIalv 181 (253)
T 3bch_A 151 EPRLLVVTDPRADHQPLTEASYVNLPTIALC 181 (253)
T ss_dssp SCSEEEESCTTTTHHHHHHHHHTTCCEEEEE
T ss_pred CCCEEEEECCCccchHHHHHHHhCCCEEEEE
Confidence 588765 888664 35667999999999984
No 137
>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*
Probab=61.82 E-value=12 Score=25.96 Aligned_cols=35 Identities=6% Similarity=-0.010 Sum_probs=24.2
Q ss_pred CCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCC
Q 040291 3 RPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTD 40 (160)
Q Consensus 3 ~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~ 40 (160)
+.+.++++..+. -+ =..++++|+++|++|.++.-.
T Consensus 6 ~~k~vlVTGas~-gI--G~~ia~~l~~~G~~V~~~~r~ 40 (241)
T 1dhr_A 6 EARRVLVYGGRG-AL--GSRCVQAFRARNWWVASIDVV 40 (241)
T ss_dssp CCCEEEEETTTS-HH--HHHHHHHHHTTTCEEEEEESS
T ss_pred CCCEEEEECCCc-HH--HHHHHHHHHhCCCEEEEEeCC
Confidence 445667764443 22 357899999999999987543
No 138
>1djl_A Transhydrogenase DIII; rossmann fold dinucleotide binding fold reverse binding of N oxidoreductase; HET: NAP; 2.00A {Homo sapiens} SCOP: c.31.1.4 PDB: 1pt9_A* 1u31_A*
Probab=61.74 E-value=11 Score=26.24 Aligned_cols=39 Identities=18% Similarity=0.265 Sum_probs=29.2
Q ss_pred CCeEEEEcCCCC---CChHHHHHHHHHHHhCCCEEEEEeCCC
Q 040291 3 RPHVLVLPIPAQ---GHVIPLLEFSQCLAKQGFRVTFVNTDY 41 (160)
Q Consensus 3 ~~~i~~~~~p~~---GH~~P~l~la~~L~~rGh~Vt~~~~~~ 41 (160)
..+|+++|.-+. ==..+..+|++.|.++|.+|.|.+++-
T Consensus 45 A~~ViIVPGYGmAVAqAQ~~v~el~~~L~~~G~~V~faIHPV 86 (207)
T 1djl_A 45 ANSIIITPGYGLCAAKAQYPIADLVKMLTEQGKKVRFGIHPV 86 (207)
T ss_dssp CSEEEEEECHHHHHHTCHHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred CCeEEEECCchHHHHHHhHHHHHHHHHHHHCCCeEEEEeCcc
Confidence 356777763221 124788999999999999999998873
No 139
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}
Probab=61.30 E-value=18 Score=25.64 Aligned_cols=37 Identities=22% Similarity=0.310 Sum_probs=25.8
Q ss_pred CCCCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCC
Q 040291 1 MNRPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTD 40 (160)
Q Consensus 1 m~~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~ 40 (160)
|.+.++++++.++.| + =..++++|+++|++|.++...
T Consensus 23 m~~~k~vlITGas~g-I--G~a~a~~l~~~G~~V~~~~~~ 59 (272)
T 4e3z_A 23 MSDTPVVLVTGGSRG-I--GAAVCRLAARQGWRVGVNYAA 59 (272)
T ss_dssp -CCSCEEEETTTTSH-H--HHHHHHHHHHTTCEEEEEESS
T ss_pred ccCCCEEEEECCCch-H--HHHHHHHHHHCCCEEEEEcCC
Confidence 445677888755442 2 368899999999999876443
No 140
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=61.16 E-value=10 Score=27.81 Aligned_cols=30 Identities=17% Similarity=0.349 Sum_probs=24.8
Q ss_pred CeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEe
Q 040291 4 PHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVN 38 (160)
Q Consensus 4 ~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~ 38 (160)
.||.++-.+..|. .+|+.|+++||+|+++.
T Consensus 6 ~kIgfIGLG~MG~-----~mA~~L~~~G~~V~v~d 35 (297)
T 4gbj_A 6 EKIAFLGLGNLGT-----PIAEILLEAGYELVVWN 35 (297)
T ss_dssp CEEEEECCSTTHH-----HHHHHHHHTTCEEEEC-
T ss_pred CcEEEEecHHHHH-----HHHHHHHHCCCeEEEEe
Confidence 4799998887774 68999999999999864
No 141
>2a5l_A Trp repressor binding protein WRBA; APC5760, PA0949, protein structure initiative, PSI, structural genomics; 1.70A {Pseudomonas aeruginosa} SCOP: c.23.5.8 PDB: 1zwk_A 1zwl_A*
Probab=61.13 E-value=17 Score=24.36 Aligned_cols=41 Identities=20% Similarity=0.354 Sum_probs=26.6
Q ss_pred CCCCeEEEEcCCCCCChHHHH-HHHHHHHhCCCEEEEEeCCC
Q 040291 1 MNRPHVLVLPIPAQGHVIPLL-EFSQCLAKQGFRVTFVNTDY 41 (160)
Q Consensus 1 m~~~~i~~~~~p~~GH~~P~l-~la~~L~~rGh~Vt~~~~~~ 41 (160)
|..++|+++-..-.|+..-+. .+++.|.+.|++|+++.-..
T Consensus 3 M~M~kilii~~S~~g~T~~la~~i~~~l~~~g~~v~~~~l~~ 44 (200)
T 2a5l_A 3 MSSPYILVLYYSRHGATAEMARQIARGVEQGGFEARVRTVPA 44 (200)
T ss_dssp --CCEEEEEECCSSSHHHHHHHHHHHHHHHTTCEEEEEBCCC
T ss_pred CCcceEEEEEeCCCChHHHHHHHHHHHHhhCCCEEEEEEhhh
Confidence 555688777655577765444 35566677899999876544
No 142
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=61.07 E-value=13 Score=26.28 Aligned_cols=37 Identities=14% Similarity=0.170 Sum_probs=25.6
Q ss_pred CCCCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCC
Q 040291 1 MNRPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTD 40 (160)
Q Consensus 1 m~~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~ 40 (160)
|.+.++++++.++. -+ =..++++|+++|++|.+....
T Consensus 1 M~~~k~vlVTGas~-gI--G~aia~~l~~~G~~vv~~~~r 37 (258)
T 3oid_A 1 MEQNKCALVTGSSR-GV--GKAAAIRLAENGYNIVINYAR 37 (258)
T ss_dssp --CCCEEEESSCSS-HH--HHHHHHHHHHTTCEEEEEESS
T ss_pred CCCCCEEEEecCCc-hH--HHHHHHHHHHCCCEEEEEcCC
Confidence 66677888885543 22 357899999999999986443
No 143
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=60.90 E-value=7.3 Score=29.50 Aligned_cols=35 Identities=11% Similarity=0.236 Sum_probs=25.6
Q ss_pred CCCCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCC
Q 040291 1 MNRPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTD 40 (160)
Q Consensus 1 m~~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~ 40 (160)
|+.++|.++-.+..| ..+++.|+++||+|+++...
T Consensus 20 m~~mkIgiIGlG~mG-----~~~A~~L~~~G~~V~v~dr~ 54 (358)
T 4e21_A 20 FQSMQIGMIGLGRMG-----ADMVRRLRKGGHECVVYDLN 54 (358)
T ss_dssp --CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSC
T ss_pred hcCCEEEEECchHHH-----HHHHHHHHhCCCEEEEEeCC
Confidence 456788888655544 46789999999999987543
No 144
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=60.87 E-value=12 Score=26.79 Aligned_cols=37 Identities=27% Similarity=0.319 Sum_probs=24.2
Q ss_pred CCCCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCC
Q 040291 1 MNRPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTD 40 (160)
Q Consensus 1 m~~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~ 40 (160)
|-+.++++++.++.| -=..++++|+++|++|.++.-.
T Consensus 21 m~~~k~~lVTGas~G---IG~aia~~la~~G~~V~~~~r~ 57 (279)
T 3sju_A 21 MSRPQTAFVTGVSSG---IGLAVARTLAARGIAVYGCARD 57 (279)
T ss_dssp ----CEEEEESTTSH---HHHHHHHHHHHTTCEEEEEESC
T ss_pred ccCCCEEEEeCCCCH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 345567788855543 2357899999999999876543
No 145
>3p9x_A Phosphoribosylglycinamide formyltransferase; structural genomics, PSI-biology, protein STRU initiative; 1.90A {Bacillus halodurans}
Probab=60.68 E-value=16 Score=25.61 Aligned_cols=46 Identities=17% Similarity=0.140 Sum_probs=31.9
Q ss_pred HHHHHHHHHhcCC-CCCccEEEecCCCccHHHHHHHhCCccEEEccc
Q 040291 92 KLEELIEDINSRE-DEKLDCFIADGYMAWSMEVAKKMNVRGALFWPS 137 (160)
Q Consensus 92 ~~~~ll~~l~~~~-~~~~d~vI~D~~~~~~~~~A~~lgiP~i~~~~~ 137 (160)
.++++++...+.. ..+..+||+|---..+...|+++|||+..+.+.
T Consensus 15 nl~ali~~~~~~~l~~eI~~Visn~~~a~v~~~A~~~gIp~~~~~~~ 61 (211)
T 3p9x_A 15 NAEAIIQSQKAGQLPCEVALLITDKPGAKVVERVKVHEIPVCALDPK 61 (211)
T ss_dssp HHHHHHHHHHTTCCSSEEEEEEESCSSSHHHHHHHTTTCCEEECCGG
T ss_pred HHHHHHHHHHcCCCCcEEEEEEECCCCcHHHHHHHHcCCCEEEeChh
Confidence 4667776654311 124678889865555778999999999987654
No 146
>3kjh_A CO dehydrogenase/acetyl-COA synthase complex, accessory protein COOC; Zn-bound dimer, nickel binding protein, ATPase; 1.90A {Carboxydothermus hydrogenoformans} PDB: 3kjg_A* 3kje_A 3kji_A*
Probab=60.34 E-value=7.2 Score=27.02 Aligned_cols=38 Identities=13% Similarity=0.023 Sum_probs=31.5
Q ss_pred CeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCCC
Q 040291 4 PHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDY 41 (160)
Q Consensus 4 ~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~ 41 (160)
++|++..-+|.|=..-...||..|+++|.+|.++=.+.
T Consensus 1 mkI~vs~kGGvGKTt~a~~LA~~la~~g~~VlliD~D~ 38 (254)
T 3kjh_A 1 MKLAVAGKGGVGKTTVAAGLIKIMASDYDKIYAVDGDP 38 (254)
T ss_dssp CEEEEECSSSHHHHHHHHHHHHHHTTTCSCEEEEEECT
T ss_pred CEEEEecCCCCCHHHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 36788667777888999999999999999999986544
No 147
>3hh1_A Tetrapyrrole methylase family protein; chlorobium tepidum, structural genom 2, protein structure initiative; 1.85A {Chlorobaculum tepidum}
Probab=60.19 E-value=8.8 Score=23.87 Aligned_cols=17 Identities=24% Similarity=0.218 Sum_probs=11.9
Q ss_pred HHHHHHHhCCCEEEEEe
Q 040291 22 EFSQCLAKQGFRVTFVN 38 (160)
Q Consensus 22 ~la~~L~~rGh~Vt~~~ 38 (160)
+...+.++.|.+|.+++
T Consensus 70 ~~i~~~~~~G~~V~~l~ 86 (117)
T 3hh1_A 70 RQVIELLEEGSDVALVT 86 (117)
T ss_dssp HHHHHHHHTTCCEEEEE
T ss_pred HHHHHHHHCCCeEEEEe
Confidence 33444456799999998
No 148
>3f67_A Putative dienelactone hydrolase; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; 1.74A {Klebsiella pneumoniae subsp}
Probab=60.13 E-value=19 Score=24.20 Aligned_cols=35 Identities=11% Similarity=0.180 Sum_probs=28.4
Q ss_pred eEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeC
Q 040291 5 HVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNT 39 (160)
Q Consensus 5 ~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~ 39 (160)
.++++-.+..|+-.-+..+++.|+++|+.|..+-.
T Consensus 33 p~vv~~HG~~g~~~~~~~~~~~l~~~G~~v~~~d~ 67 (241)
T 3f67_A 33 PIVIVVQEIFGVHEHIRDLCRRLAQEGYLAIAPEL 67 (241)
T ss_dssp EEEEEECCTTCSCHHHHHHHHHHHHTTCEEEEECT
T ss_pred CEEEEEcCcCccCHHHHHHHHHHHHCCcEEEEecc
Confidence 35666667778888899999999999999887654
No 149
>1e4e_A Vancomycin/teicoplanin A-type resistance protein; ligase, cell WALL, antibiotic resistance, membrane, peptidog synthesis; HET: ADP PHY; 2.5A {Enterococcus faecium} SCOP: c.30.1.2 d.142.1.1 PDB: 1e4e_B*
Probab=59.90 E-value=7.7 Score=28.80 Aligned_cols=38 Identities=21% Similarity=0.329 Sum_probs=28.1
Q ss_pred CCCCeEEEEcCCCCCC-----hHHHHHHHHHHHhCCCEEEEEeC
Q 040291 1 MNRPHVLVLPIPAQGH-----VIPLLEFSQCLAKQGFRVTFVNT 39 (160)
Q Consensus 1 m~~~~i~~~~~p~~GH-----~~P~l~la~~L~~rGh~Vt~~~~ 39 (160)
|.++||+++. +++|. +..-..++++|.++||+|..+..
T Consensus 1 m~~~~v~vl~-gG~s~E~~vs~~s~~~v~~al~~~g~~v~~i~~ 43 (343)
T 1e4e_A 1 MNRIKVAILF-GGCSEEHDVSVKSAIEIAANINKEKYEPLYIGI 43 (343)
T ss_dssp -CCEEEEEEE-ECSSTTHHHHHHHHHHHHHHSCTTTEEEEEEEE
T ss_pred CCCcEEEEEe-CCCCCCcchhHHHHHHHHHHhhhcCCEEEEEEE
Confidence 7788988887 44552 22567789999999999999764
No 150
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=59.64 E-value=10 Score=27.59 Aligned_cols=36 Identities=17% Similarity=0.229 Sum_probs=23.7
Q ss_pred CCCCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCC
Q 040291 1 MNRPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTD 40 (160)
Q Consensus 1 m~~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~ 40 (160)
|+.++|++. ++.|-+- ..++++|+++||+|+.+.-.
T Consensus 1 m~~~~vlVt--GatG~iG--~~l~~~L~~~G~~V~~~~r~ 36 (345)
T 2z1m_A 1 MSGKRALIT--GIRGQDG--AYLAKLLLEKGYEVYGADRR 36 (345)
T ss_dssp --CCEEEEE--TTTSHHH--HHHHHHHHHTTCEEEEECSC
T ss_pred CCCCEEEEE--CCCChHH--HHHHHHHHHCCCEEEEEECC
Confidence 555666554 4445442 56899999999999987643
No 151
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=59.62 E-value=13 Score=27.03 Aligned_cols=36 Identities=14% Similarity=0.243 Sum_probs=23.3
Q ss_pred CCCCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeC
Q 040291 1 MNRPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNT 39 (160)
Q Consensus 1 m~~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~ 39 (160)
|...+.++++ ++.|-+- ..++++|+++|++|+.+.-
T Consensus 2 M~~~~~vlVT-GatG~iG--~~l~~~L~~~G~~V~~~~r 37 (341)
T 3enk_A 2 MSTKGTILVT-GGAGYIG--SHTAVELLAHGYDVVIADN 37 (341)
T ss_dssp CCSSCEEEEE-TTTSHHH--HHHHHHHHHTTCEEEEECC
T ss_pred CCCCcEEEEe-cCCcHHH--HHHHHHHHHCCCcEEEEec
Confidence 4433334444 3444433 5789999999999998754
No 152
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}
Probab=59.58 E-value=20 Score=22.49 Aligned_cols=42 Identities=10% Similarity=0.133 Sum_probs=25.4
Q ss_pred HHHHHHHhcCCCCCccEEEecCCCcc--HHHHHHHh-----CCccEEEccch
Q 040291 94 EELIEDINSREDEKLDCFIADGYMAW--SMEVAKKM-----NVRGALFWPSS 138 (160)
Q Consensus 94 ~~ll~~l~~~~~~~~d~vI~D~~~~~--~~~~A~~l-----giP~i~~~~~~ 138 (160)
.+.++.+.. .+||+||.|...+. +..+.+++ ++|++.+....
T Consensus 41 ~~a~~~l~~---~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~~ 89 (154)
T 2rjn_A 41 LDALEALKG---TSVQLVISDMRMPEMGGEVFLEQVAKSYPDIERVVISGYA 89 (154)
T ss_dssp HHHHHHHTT---SCCSEEEEESSCSSSCHHHHHHHHHHHCTTSEEEEEECGG
T ss_pred HHHHHHHhc---CCCCEEEEecCCCCCCHHHHHHHHHHhCCCCcEEEEecCC
Confidence 445555443 46999999986642 44444333 57888776543
No 153
>3hv2_A Response regulator/HD domain protein; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.50A {Pseudomonas fluorescens pf-5}
Probab=59.05 E-value=20 Score=22.49 Aligned_cols=42 Identities=10% Similarity=0.146 Sum_probs=25.9
Q ss_pred HHHHHHHHhcCCCCCccEEEecCCCcc--HHHHHHHh-----CCccEEEccc
Q 040291 93 LEELIEDINSREDEKLDCFIADGYMAW--SMEVAKKM-----NVRGALFWPS 137 (160)
Q Consensus 93 ~~~ll~~l~~~~~~~~d~vI~D~~~~~--~~~~A~~l-----giP~i~~~~~ 137 (160)
..+.++.+.+ .+||+||.|..... +..+.+++ ++|.|.+...
T Consensus 47 ~~~a~~~l~~---~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~ 95 (153)
T 3hv2_A 47 ATQALQLLAS---REVDLVISAAHLPQMDGPTLLARIHQQYPSTTRILLTGD 95 (153)
T ss_dssp HHHHHHHHHH---SCCSEEEEESCCSSSCHHHHHHHHHHHCTTSEEEEECCC
T ss_pred HHHHHHHHHc---CCCCEEEEeCCCCcCcHHHHHHHHHhHCCCCeEEEEECC
Confidence 3444544443 57999999987643 44444332 5788777654
No 154
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=58.56 E-value=6.6 Score=30.18 Aligned_cols=36 Identities=19% Similarity=0.292 Sum_probs=22.6
Q ss_pred CCCCeEEEEcCCCCCChHHHHHHHHHHHhC--CCEEEEEeCCCC
Q 040291 1 MNRPHVLVLPIPAQGHVIPLLEFSQCLAKQ--GFRVTFVNTDYD 42 (160)
Q Consensus 1 m~~~~i~~~~~p~~GH~~P~l~la~~L~~r--Gh~Vt~~~~~~~ 42 (160)
|+| ||+++-.+ .+.+ ..|+.|+++ +++||++....+
T Consensus 1 M~K-~VvIIGgG-~aGl----~aA~~L~~~~~~~~VtlI~~~~~ 38 (430)
T 3hyw_A 1 MAK-HVVVIGGG-VGGI----ATAYNLRNLMPDLKITLISDRPY 38 (430)
T ss_dssp -CC-EEEEECSS-HHHH----HHHHHHHHHCTTCEEEEECSSSE
T ss_pred CCC-cEEEECCC-HHHH----HHHHHHhccCcCCeEEEEcCCCC
Confidence 754 88888643 3333 445666654 499999987653
No 155
>2i87_A D-alanine-D-alanine ligase; APO; 2.00A {Staphylococcus aureus subsp} PDB: 2i8c_A* 3n8d_A* 2i80_A*
Probab=58.37 E-value=6.1 Score=29.69 Aligned_cols=38 Identities=11% Similarity=0.307 Sum_probs=26.8
Q ss_pred CCCCeEEEEcCCCCC--C---hHHHHHHHHHHHhCCCEEEEEeC
Q 040291 1 MNRPHVLVLPIPAQG--H---VIPLLEFSQCLAKQGFRVTFVNT 39 (160)
Q Consensus 1 m~~~~i~~~~~p~~G--H---~~P~l~la~~L~~rGh~Vt~~~~ 39 (160)
|.+++|+++.. +.| | +..-..++++|.++||+|..+..
T Consensus 1 m~~~~v~vl~g-g~s~E~~vs~~s~~~v~~al~~~g~~v~~i~~ 43 (364)
T 2i87_A 1 MTKENICIVFG-GKSAEHEVSILTAQNVLNAIDKDKYHVDIIYI 43 (364)
T ss_dssp --CEEEEEEEE-CSSSCHHHHHHHHHHHHHTSCTTTEEEEEEEE
T ss_pred CCCcEEEEEEC-CCCccchhHHHHHHHHHHHHhhcCCEEEEEEE
Confidence 77889988874 443 2 23457789999999999998864
No 156
>3trh_A Phosphoribosylaminoimidazole carboxylase carboxyltransferase subunit; purines, pyrimidines, nucleosides, nucleotides, lyase; 2.20A {Coxiella burnetii}
Probab=58.24 E-value=24 Score=23.81 Aligned_cols=44 Identities=18% Similarity=0.224 Sum_probs=32.5
Q ss_pred CCCCeEEEEcCCCCCChHHHHHHHHHHHhCC--CEEEEEeCCCChhh
Q 040291 1 MNRPHVLVLPIPAQGHVIPLLEFSQCLAKQG--FRVTFVNTDYDHKR 45 (160)
Q Consensus 1 m~~~~i~~~~~p~~GH~~P~l~la~~L~~rG--h~Vt~~~~~~~~~~ 45 (160)
|.+++|+++. ++.+++--+.+.++.|.+-| ++|.+++.....++
T Consensus 4 m~~~~V~Iim-gS~SD~~v~~~a~~~l~~~gi~~ev~V~SaHR~p~~ 49 (169)
T 3trh_A 4 MNKIFVAILM-GSDSDLSTMETAFTELKSLGIPFEAHILSAHRTPKE 49 (169)
T ss_dssp --CCEEEEEE-SCGGGHHHHHHHHHHHHHTTCCEEEEECCTTTSHHH
T ss_pred CCCCcEEEEE-CcHHhHHHHHHHHHHHHHcCCCEEEEEEcccCCHHH
Confidence 6778888887 88899999999999998877 67777766554333
No 157
>2vo1_A CTP synthase 1; pyrimidine biosynthesis, glutamine amidotransferase, phosphorylation, amidotransferase, cytidine 5-prime triphos synthetase, UTP; 2.8A {Homo sapiens} SCOP: c.37.1.10 PDB: 3ihl_A*
Probab=58.15 E-value=17 Score=26.68 Aligned_cols=43 Identities=16% Similarity=0.102 Sum_probs=33.1
Q ss_pred CCCCeEEEEcCCCC---CChHHHHHHHHHHHhCCCEEEEEeCCCCh
Q 040291 1 MNRPHVLVLPIPAQ---GHVIPLLEFSQCLAKQGFRVTFVNTDYDH 43 (160)
Q Consensus 1 m~~~~i~~~~~p~~---GH~~P~l~la~~L~~rGh~Vt~~~~~~~~ 43 (160)
|..++..+++.+-. |-=.-...+++.|.+||++||.+--+.+.
T Consensus 20 ~~~~KyIfVTGGVvS~lGKGi~aaSlg~lLk~~G~~Vt~~K~DPYl 65 (295)
T 2vo1_A 20 FQSMKYILVTGGVISGIGKGIIASSVGTILKSCGLHVTSIKIDPYI 65 (295)
T ss_dssp -CCCEEEEEEECSSSSSSHHHHHHHHHHHHHHTTCCEEEEEEECSS
T ss_pred cccceEEEEcCCcccccccHHHHHHHHHHHHHCCCcceeeecccce
Confidence 45678888885543 44477889999999999999998776654
No 158
>3nhm_A Response regulator; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.19A {Myxococcus xanthus}
Probab=58.12 E-value=25 Score=21.22 Aligned_cols=32 Identities=13% Similarity=0.049 Sum_probs=20.4
Q ss_pred CCccEEEecCCCcc--HHHHHHH-------hCCccEEEccc
Q 040291 106 EKLDCFIADGYMAW--SMEVAKK-------MNVRGALFWPS 137 (160)
Q Consensus 106 ~~~d~vI~D~~~~~--~~~~A~~-------lgiP~i~~~~~ 137 (160)
.+||+||.|...+. +..+.++ -++|.+.+...
T Consensus 46 ~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~~pii~~s~~ 86 (133)
T 3nhm_A 46 HPPDVLISDVNMDGMDGYALCGHFRSEPTLKHIPVIFVSGY 86 (133)
T ss_dssp SCCSEEEECSSCSSSCHHHHHHHHHHSTTTTTCCEEEEESC
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHhCCccCCCCEEEEeCC
Confidence 57999999986643 4433322 25787777653
No 159
>2vqe_B 30S ribosomal protein S2; tRNA-binding, rRNA-binding, metal-binding, zinc-finger, translation; HET: TM2 PAR; 2.5A {Thermus thermophilus} SCOP: c.23.15.1 PDB: 1gix_E* 1hnw_B* 1hnx_B* 1hnz_B* 1hr0_B 1ibk_B* 1ibl_B* 1ibm_B 1j5e_B 1jgo_E* 1jgp_E* 1jgq_E* 1ml5_E* 1n32_B* 1n33_B* 1n34_B 1n36_B 1xmo_B* 1xmq_B* 1xnq_B* ...
Probab=58.10 E-value=2 Score=31.24 Aligned_cols=32 Identities=13% Similarity=0.071 Sum_probs=23.9
Q ss_pred CCccEEE-ecCCCc-cHHHHHHHhCCccEEEccc
Q 040291 106 EKLDCFI-ADGYMA-WSMEVAKKMNVRGALFWPS 137 (160)
Q Consensus 106 ~~~d~vI-~D~~~~-~~~~~A~~lgiP~i~~~~~ 137 (160)
..||+|| .|+--- -+..-|.++|||.|.+.-+
T Consensus 157 ~~Pdll~V~Dp~~e~~Ai~EA~~l~IPvIaivDT 190 (256)
T 2vqe_B 157 RLPDAIFVVDPTKEAIAVREARKLFIPVIALADT 190 (256)
T ss_dssp SCCSEEEESCTTTTHHHHHHHHHTTCCCEECCCT
T ss_pred cCCCEEEEeCCccchHHHHHHHHcCCCEEEEecC
Confidence 4688766 888653 4567799999999997543
No 160
>3dkr_A Esterase D; alpha beta hydrolase, mechanism, catalytic triad, rotation; 1.60A {Lactobacillus rhamnosus} SCOP: c.69.1.0 PDB: 3dlt_A 3dyi_A 3dyv_A 3e1g_A
Probab=58.09 E-value=14 Score=24.68 Aligned_cols=37 Identities=16% Similarity=0.117 Sum_probs=28.9
Q ss_pred CeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCC
Q 040291 4 PHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTD 40 (160)
Q Consensus 4 ~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~ 40 (160)
...+++-.+..|+..-+..+++.|+++|+.|..+--.
T Consensus 22 ~~~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~d~~ 58 (251)
T 3dkr_A 22 DTGVVLLHAYTGSPNDMNFMARALQRSGYGVYVPLFS 58 (251)
T ss_dssp SEEEEEECCTTCCGGGGHHHHHHHHHTTCEEEECCCT
T ss_pred CceEEEeCCCCCCHHHHHHHHHHHHHCCCEEEecCCC
Confidence 3455666677788888899999999999998876543
No 161
>2qxy_A Response regulator; regulation of transcription, NYSGXRC, protein structure initiative II (PSI II), structural genomics; 1.95A {Thermotoga maritima}
Probab=58.07 E-value=20 Score=21.99 Aligned_cols=40 Identities=18% Similarity=0.286 Sum_probs=23.7
Q ss_pred HHHHHHHhcCCCCCccEEEecCCCcc--HHHHHHHh-----CCccEEEccc
Q 040291 94 EELIEDINSREDEKLDCFIADGYMAW--SMEVAKKM-----NVRGALFWPS 137 (160)
Q Consensus 94 ~~ll~~l~~~~~~~~d~vI~D~~~~~--~~~~A~~l-----giP~i~~~~~ 137 (160)
.+.++.+.. .+||+||.|. ... +..+.+++ ++|++.+...
T Consensus 38 ~~a~~~l~~---~~~dlvi~d~-~~~~~g~~~~~~l~~~~~~~pii~ls~~ 84 (142)
T 2qxy_A 38 QEAFTFLRR---EKIDLVFVDV-FEGEESLNLIRRIREEFPDTKVAVLSAY 84 (142)
T ss_dssp HHHHHHHTT---SCCSEEEEEC-TTTHHHHHHHHHHHHHCTTCEEEEEESC
T ss_pred HHHHHHHhc---cCCCEEEEeC-CCCCcHHHHHHHHHHHCCCCCEEEEECC
Confidence 444444433 5789999998 643 33333332 5888877554
No 162
>2bru_C NAD(P) transhydrogenase subunit beta; paramagnetic transhydrogenase, inner membrane, membrane, oxidoreductase, transmembrane; HET: NAD NAP; NMR {Escherichia coli}
Probab=58.06 E-value=10 Score=25.77 Aligned_cols=39 Identities=21% Similarity=0.255 Sum_probs=29.5
Q ss_pred CCeEEEEcCCCC---CChHHHHHHHHHHHhCCCEEEEEeCCC
Q 040291 3 RPHVLVLPIPAQ---GHVIPLLEFSQCLAKQGFRVTFVNTDY 41 (160)
Q Consensus 3 ~~~i~~~~~p~~---GH~~P~l~la~~L~~rGh~Vt~~~~~~ 41 (160)
..+|+++|.=|. -=..+..+|++.|.++|.+|.|.+.+-
T Consensus 30 A~~ViIVPGYGmAVAqAQ~~v~el~~~L~~~G~~V~faIHPV 71 (186)
T 2bru_C 30 SHSVIITPGYGMAVAQAQYPVAEITEKLRARGINVRFGIHPV 71 (186)
T ss_dssp CSEEEEECSBHHHHTTTHHHHHHHHHHHHHHCCEEEEEECSS
T ss_pred CCeEEEECChHHHHHHHHHHHHHHHHHHHHCCCeEEEEeccc
Confidence 456777763331 124799999999999999999988863
No 163
>1gsa_A Glutathione synthetase; ligase; HET: ADP GSH; 2.00A {Escherichia coli} SCOP: c.30.1.3 d.142.1.1 PDB: 1gsh_A 2glt_A 1glv_A
Probab=57.68 E-value=14 Score=26.61 Aligned_cols=37 Identities=5% Similarity=0.111 Sum_probs=27.4
Q ss_pred CeEEEEcCCCCCC---hHHHHHHHHHHHhCCCEEEEEeCC
Q 040291 4 PHVLVLPIPAQGH---VIPLLEFSQCLAKQGFRVTFVNTD 40 (160)
Q Consensus 4 ~~i~~~~~p~~GH---~~P~l~la~~L~~rGh~Vt~~~~~ 40 (160)
++|+++..+.... ......+++++.++||+|.++.+.
T Consensus 2 m~i~il~~~~~~~~~~~~s~~~l~~a~~~~G~~v~~~d~~ 41 (316)
T 1gsa_A 2 IKLGIVMDPIANINIKKDSSFAMLLEAQRRGYELHYMEMG 41 (316)
T ss_dssp CEEEEECSCGGGCCTTTCHHHHHHHHHHHTTCEEEEECGG
T ss_pred ceEEEEeCcHHhCCcCCChHHHHHHHHHHCCCEEEEEchh
Confidence 4788888664321 234567999999999999998764
No 164
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=57.52 E-value=15 Score=26.95 Aligned_cols=31 Identities=13% Similarity=0.304 Sum_probs=26.1
Q ss_pred CeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeC
Q 040291 4 PHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNT 39 (160)
Q Consensus 4 ~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~ 39 (160)
.+|.++-.+..|. .+|+.|.++||+|+++.-
T Consensus 4 ~kIgfIGlG~MG~-----~mA~~L~~~G~~v~v~dr 34 (300)
T 3obb_A 4 KQIAFIGLGHMGA-----PMATNLLKAGYLLNVFDL 34 (300)
T ss_dssp CEEEEECCSTTHH-----HHHHHHHHTTCEEEEECS
T ss_pred CEEEEeeehHHHH-----HHHHHHHhCCCeEEEEcC
Confidence 4788988888884 679999999999999754
No 165
>1zi8_A Carboxymethylenebutenolidase; alpha and beta proteins, 3-D structure, serine esterase, HYD aromatic hydrocarbons, catabolism; 1.40A {Pseudomonas putida} PDB: 1zj5_A* 1zi9_A 1zi6_A 1zj4_A* 1din_A 1ziy_A* 1zic_A 1zix_A 1ggv_A*
Probab=57.43 E-value=23 Score=23.68 Aligned_cols=34 Identities=21% Similarity=0.213 Sum_probs=27.0
Q ss_pred EEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeC
Q 040291 6 VLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNT 39 (160)
Q Consensus 6 i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~ 39 (160)
++++-.+..|...-+..+++.|+++|+.|..+-.
T Consensus 30 ~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~ 63 (236)
T 1zi8_A 30 VIVIAQDIFGVNAFMRETVSWLVDQGYAAVCPDL 63 (236)
T ss_dssp EEEEECCTTBSCHHHHHHHHHHHHTTCEEEEECG
T ss_pred EEEEEcCCCCCCHHHHHHHHHHHhCCcEEEeccc
Confidence 5555567778888899999999999998877653
No 166
>1pq4_A Periplasmic binding protein component of AN ABC T uptake transporter; ZNUA, loop, metal-binding, metal binding protein; 1.90A {Synechocystis SP} SCOP: c.92.2.2 PDB: 2ov3_A 2ov1_A
Probab=57.39 E-value=16 Score=26.65 Aligned_cols=50 Identities=18% Similarity=0.235 Sum_probs=36.5
Q ss_pred HHHHHHHHHHhcCCCCCccEEEecCCCcc--HHHHHHHhCCccEEEccchHHHHH
Q 040291 91 GKLEELIEDINSREDEKLDCFIADGYMAW--SMEVAKKMNVRGALFWPSSAASVA 143 (160)
Q Consensus 91 ~~~~~ll~~l~~~~~~~~d~vI~D~~~~~--~~~~A~~lgiP~i~~~~~~~~~~~ 143 (160)
..+.++.+.+++ .+..||+++..... +..+|++.|++.+.+.+.+...+.
T Consensus 224 ~~l~~l~~~ik~---~~v~~If~e~~~~~~~~~~ia~~~g~~v~~ld~l~~~Y~~ 275 (291)
T 1pq4_A 224 QELKQLIDTAKE---NNLTMVFGETQFSTKSSEAIAAEIGAGVELLDPLAADWSS 275 (291)
T ss_dssp HHHHHHHHHHHT---TTCCEEEEETTSCCHHHHHHHHHHTCEEEEECTTCSSHHH
T ss_pred HHHHHHHHHHHH---cCCCEEEEeCCCChHHHHHHHHHcCCeEEEEcCchhhHHH
Confidence 345666666654 68999999998765 466999999999988776553333
No 167
>3cu5_A Two component transcriptional regulator, ARAC FAM; structural genomics, protein structure initiative; 2.60A {Clostridium phytofermentans isdg}
Probab=57.32 E-value=25 Score=21.75 Aligned_cols=31 Identities=10% Similarity=0.179 Sum_probs=20.0
Q ss_pred CCccEEEecCCCcc--HHHHHHHh-----CCccEEEcc
Q 040291 106 EKLDCFIADGYMAW--SMEVAKKM-----NVRGALFWP 136 (160)
Q Consensus 106 ~~~d~vI~D~~~~~--~~~~A~~l-----giP~i~~~~ 136 (160)
.+||+||.|.-.+. +..+.+++ ++|.+.+..
T Consensus 48 ~~~dlvllD~~lp~~~g~~l~~~l~~~~~~~~ii~ls~ 85 (141)
T 3cu5_A 48 HPPNVLLTDVRMPRMDGIELVDNILKLYPDCSVIFMSG 85 (141)
T ss_dssp SCCSEEEEESCCSSSCHHHHHHHHHHHCTTCEEEEECC
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHhhCCCCcEEEEeC
Confidence 46899999986643 44444433 477777654
No 168
>4ds3_A Phosphoribosylglycinamide formyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.85A {Brucella melitensis BV}
Probab=57.24 E-value=18 Score=25.20 Aligned_cols=45 Identities=16% Similarity=0.191 Sum_probs=30.3
Q ss_pred HHHHHHHHHhcCC-CCCccEEEecCCCccHHHHHHHhCCccEEEcc
Q 040291 92 KLEELIEDINSRE-DEKLDCFIADGYMAWSMEVAKKMNVRGALFWP 136 (160)
Q Consensus 92 ~~~~ll~~l~~~~-~~~~d~vI~D~~~~~~~~~A~~lgiP~i~~~~ 136 (160)
.++++++.+.+.. .....+||+|.--..+...|+++|||+..+..
T Consensus 20 nl~all~~~~~~~l~~~I~~Visn~~~a~~l~~A~~~gIp~~~~~~ 65 (209)
T 4ds3_A 20 NMEALIRAAQAPGFPAEIVAVFSDKAEAGGLAKAEAAGIATQVFKR 65 (209)
T ss_dssp HHHHHHHHHTSTTCSEEEEEEEESCTTCTHHHHHHHTTCCEEECCG
T ss_pred HHHHHHHHHHcCCCCcEEEEEEECCcccHHHHHHHHcCCCEEEeCc
Confidence 4566666654311 02467788886444567899999999998764
No 169
>2ixd_A LMBE-related protein; hexamer, deacetylase, rossman fold, zinc-dependent metalloenzyme, hydrolase; 1.8A {Bacillus cereus}
Probab=57.23 E-value=13 Score=26.42 Aligned_cols=37 Identities=22% Similarity=0.283 Sum_probs=21.2
Q ss_pred CCCCeEEEE-cCCCCCChHHHHHHHHHHHhCCCEEEEEe
Q 040291 1 MNRPHVLVL-PIPAQGHVIPLLEFSQCLAKQGFRVTFVN 38 (160)
Q Consensus 1 m~~~~i~~~-~~p~~GH~~P~l~la~~L~~rGh~Vt~~~ 38 (160)
|++.+++++ |.|--= ..-+-.....++++|++|++++
T Consensus 1 ~~~~~vL~v~aHPDDe-~l~~Ggtia~~~~~G~~V~vv~ 38 (242)
T 2ixd_A 1 MSGLHILAFGAHADDV-EIGMAGTIAKYTKQGYEVGICD 38 (242)
T ss_dssp -CCCSEEEEESSTTHH-HHHHHHHHHHHHHTTCCEEEEE
T ss_pred CCCccEEEEEeCCChH-HHhHHHHHHHHHHCCCeEEEEE
Confidence 566665544 444321 2334455567778999999864
No 170
>1kjn_A MTH0777; hypotethical protein, structural genomics, PSI, protein structure initiative; 2.20A {Methanothermobacterthermautotrophicus} SCOP: c.115.1.1
Probab=57.17 E-value=8.8 Score=25.47 Aligned_cols=33 Identities=24% Similarity=0.241 Sum_probs=25.8
Q ss_pred CChHHHHHHHHHHHhCCCEEEEEeCCCChhhHH
Q 040291 15 GHVIPLLEFSQCLAKQGFRVTFVNTDYDHKRIM 47 (160)
Q Consensus 15 GH~~P~l~la~~L~~rGh~Vt~~~~~~~~~~~~ 47 (160)
--+--.+=++..|.++||+|++..++.-.+.++
T Consensus 20 vq~p~~lYl~~~Lk~~G~~v~VA~npAAlkLle 52 (157)
T 1kjn_A 20 VQIPLAIYTSHKLKKKGFRVTVTANPAALRLVQ 52 (157)
T ss_dssp THHHHHHHHHHHHHHTTCEEEEEECHHHHHHHH
T ss_pred chhhHHHHHHHHHHhcCCeeEEecCHHHHhhee
Confidence 445566788899999999999999987655443
No 171
>3sbx_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: AMP; 2.50A {Mycobacterium marinum M}
Probab=57.15 E-value=24 Score=24.20 Aligned_cols=33 Identities=18% Similarity=0.121 Sum_probs=23.5
Q ss_pred CCeEEEEcCCCCCCh----HHHHHHHHHHHhCCCEEEE
Q 040291 3 RPHVLVLPIPAQGHV----IPLLEFSQCLAKQGFRVTF 36 (160)
Q Consensus 3 ~~~i~~~~~p~~GH~----~P~l~la~~L~~rGh~Vt~ 36 (160)
+++|.++.... +.- .-..+|++.|+++|+.|..
T Consensus 13 ~~~I~Vfg~s~-~~~~~~~~~A~~lg~~la~~g~~lv~ 49 (189)
T 3sbx_A 13 RWTVAVYCAAA-PTHPELLELAGAVGAAIAARGWTLVW 49 (189)
T ss_dssp CCEEEEECCSS-CCCHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred CeEEEEEEeCC-CCChHHHHHHHHHHHHHHHCCCEEEE
Confidence 46788888665 443 4457788889999987654
No 172
>3bbn_B Ribosomal protein S2; small ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea} SCOP: i.1.1.1
Probab=57.11 E-value=8 Score=27.55 Aligned_cols=30 Identities=10% Similarity=0.028 Sum_probs=22.9
Q ss_pred CccEEE-ecCCCc-cHHHHHHHhCCccEEEcc
Q 040291 107 KLDCFI-ADGYMA-WSMEVAKKMNVRGALFWP 136 (160)
Q Consensus 107 ~~d~vI-~D~~~~-~~~~~A~~lgiP~i~~~~ 136 (160)
.||+|| .|+--- -+..-|.++|||.|.+.-
T Consensus 157 ~Pdll~v~Dp~~e~~ai~EA~~l~IPvIaivD 188 (231)
T 3bbn_B 157 LPDIVIIVDQQEEYTALRECITLGIPTICLID 188 (231)
T ss_dssp CCSEEEESCTTTTHHHHHHHHTTTCCEEECCC
T ss_pred CCCEEEEeCCccccHHHHHHHHhCCCEEEEec
Confidence 588766 887653 356679999999999853
No 173
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=57.08 E-value=7.2 Score=30.69 Aligned_cols=34 Identities=18% Similarity=0.351 Sum_probs=26.8
Q ss_pred CCCCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeC
Q 040291 1 MNRPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNT 39 (160)
Q Consensus 1 m~~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~ 39 (160)
|.+++|.++-.+..| ..+++.|+++||+|+++..
T Consensus 3 m~~~~IgvIG~G~mG-----~~lA~~L~~~G~~V~v~dr 36 (474)
T 2iz1_A 3 MAQANFGVVGMAVMG-----KNLALNVESRGYTVAIYNR 36 (474)
T ss_dssp CTTBSEEEECCSHHH-----HHHHHHHHHTTCCEEEECS
T ss_pred CCCCcEEEEeeHHHH-----HHHHHHHHhCCCEEEEEcC
Confidence 666789988766665 4578999999999988754
No 174
>4e7p_A Response regulator; DNA binding, cytosol, transcription regulator; 1.89A {Streptococcus pneumoniae} PDB: 4e7o_A
Probab=57.01 E-value=24 Score=22.03 Aligned_cols=42 Identities=21% Similarity=0.167 Sum_probs=26.9
Q ss_pred HHHHHHHHhcCCCCCccEEEecCCCcc--HHHHHHHh-----CCccEEEccc
Q 040291 93 LEELIEDINSREDEKLDCFIADGYMAW--SMEVAKKM-----NVRGALFWPS 137 (160)
Q Consensus 93 ~~~ll~~l~~~~~~~~d~vI~D~~~~~--~~~~A~~l-----giP~i~~~~~ 137 (160)
.++.++.+.+ .+||+||.|.-... +..+.+++ ++|.+.+...
T Consensus 55 ~~~al~~l~~---~~~dlii~D~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~ 103 (150)
T 4e7p_A 55 GQEAIQLLEK---ESVDIAILDVEMPVKTGLEVLEWIRSEKLETKVVVVTTF 103 (150)
T ss_dssp HHHHHHHHTT---SCCSEEEECSSCSSSCHHHHHHHHHHTTCSCEEEEEESC
T ss_pred HHHHHHHhhc---cCCCEEEEeCCCCCCcHHHHHHHHHHhCCCCeEEEEeCC
Confidence 4566666544 57999999986643 44444432 5787777654
No 175
>3cg0_A Response regulator receiver modulated diguanylate with PAS/PAC sensor; signal receiver domain, diguanylate cyclase; 2.15A {Desulfovibrio desulfuricans subsp}
Probab=56.82 E-value=18 Score=22.16 Aligned_cols=42 Identities=19% Similarity=0.130 Sum_probs=25.5
Q ss_pred HHHHHHHhcCCCCCccEEEecCCCc---cHHHHHHH----hCCccEEEccch
Q 040291 94 EELIEDINSREDEKLDCFIADGYMA---WSMEVAKK----MNVRGALFWPSS 138 (160)
Q Consensus 94 ~~ll~~l~~~~~~~~d~vI~D~~~~---~~~~~A~~----lgiP~i~~~~~~ 138 (160)
.+.++.+.+ .+||+||.|.... .+..+.++ .++|++.+....
T Consensus 44 ~~a~~~~~~---~~~dlii~d~~~~~~~~g~~~~~~l~~~~~~~ii~ls~~~ 92 (140)
T 3cg0_A 44 EEAVRCAPD---LRPDIALVDIMLCGALDGVETAARLAAGCNLPIIFITSSQ 92 (140)
T ss_dssp HHHHHHHHH---HCCSEEEEESSCCSSSCHHHHHHHHHHHSCCCEEEEECCC
T ss_pred HHHHHHHHh---CCCCEEEEecCCCCCCCHHHHHHHHHhCCCCCEEEEecCC
Confidence 444444433 4699999997653 24444433 478888876543
No 176
>2qr3_A Two-component system response regulator; structural genomics, signal receiver, PSI-2, protein structu initiative; 1.80A {Bacteroides fragilis}
Probab=56.79 E-value=23 Score=21.57 Aligned_cols=33 Identities=12% Similarity=0.112 Sum_probs=20.3
Q ss_pred CCccEEEecCCCc-------cHHHHHHHh-----CCccEEEccch
Q 040291 106 EKLDCFIADGYMA-------WSMEVAKKM-----NVRGALFWPSS 138 (160)
Q Consensus 106 ~~~d~vI~D~~~~-------~~~~~A~~l-----giP~i~~~~~~ 138 (160)
.++|+||.|.-.. .+..+.+++ ++|.+.+....
T Consensus 46 ~~~dlvi~d~~~~~~~~~~~~g~~~~~~l~~~~~~~~ii~ls~~~ 90 (140)
T 2qr3_A 46 ENPEVVLLDMNFTSGINNGNEGLFWLHEIKRQYRDLPVVLFTAYA 90 (140)
T ss_dssp SCEEEEEEETTTTC-----CCHHHHHHHHHHHCTTCCEEEEEEGG
T ss_pred CCCCEEEEeCCcCCCCCCCccHHHHHHHHHhhCcCCCEEEEECCC
Confidence 4689999997654 233333332 57887775543
No 177
>3tqr_A Phosphoribosylglycinamide formyltransferase; purines, pyrimidines, nucleosides, nucleotides; HET: NHE; 1.97A {Coxiella burnetii} SCOP: c.65.1.0
Probab=56.73 E-value=19 Score=25.26 Aligned_cols=45 Identities=13% Similarity=0.220 Sum_probs=30.1
Q ss_pred HHHHHHHHHhcCCCCCccEEEecCCCccHHHHHHHhCCccEEEcc
Q 040291 92 KLEELIEDINSREDEKLDCFIADGYMAWSMEVAKKMNVRGALFWP 136 (160)
Q Consensus 92 ~~~~ll~~l~~~~~~~~d~vI~D~~~~~~~~~A~~lgiP~i~~~~ 136 (160)
.++++++...+.......+||+|.--..+...|+++|||+..+.+
T Consensus 18 nl~all~~~~~~~~~eI~~Vis~~~~a~~~~~A~~~gIp~~~~~~ 62 (215)
T 3tqr_A 18 NLQAIIGAIQKGLAIEIRAVISNRADAYGLKRAQQADIPTHIIPH 62 (215)
T ss_dssp HHHHHHHHHHTTCSEEEEEEEESCTTCHHHHHHHHTTCCEEECCG
T ss_pred HHHHHHHHHHcCCCCEEEEEEeCCcchHHHHHHHHcCCCEEEeCc
Confidence 455666655431012467788886555567899999999998754
No 178
>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*
Probab=56.61 E-value=11 Score=26.63 Aligned_cols=20 Identities=25% Similarity=0.414 Sum_probs=17.0
Q ss_pred HHHHHHHHhCCCEEEEEeCC
Q 040291 21 LEFSQCLAKQGFRVTFVNTD 40 (160)
Q Consensus 21 l~la~~L~~rGh~Vt~~~~~ 40 (160)
..+|++|+++|++|+++..+
T Consensus 38 ~aiA~~~~~~Ga~V~l~~~~ 57 (226)
T 1u7z_A 38 FAIAAAAARRGANVTLVSGP 57 (226)
T ss_dssp HHHHHHHHHTTCEEEEEECS
T ss_pred HHHHHHHHHCCCEEEEEECC
Confidence 57889999999999998653
No 179
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=55.98 E-value=8 Score=24.15 Aligned_cols=32 Identities=19% Similarity=0.239 Sum_probs=23.0
Q ss_pred CeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCC
Q 040291 4 PHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTD 40 (160)
Q Consensus 4 ~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~ 40 (160)
.+|+++-. |.+- ..+++.|.++|++|+++...
T Consensus 7 ~~v~I~G~---G~iG--~~~a~~l~~~g~~v~~~d~~ 38 (144)
T 2hmt_A 7 KQFAVIGL---GRFG--GSIVKELHRMGHEVLAVDIN 38 (144)
T ss_dssp CSEEEECC---SHHH--HHHHHHHHHTTCCCEEEESC
T ss_pred CcEEEECC---CHHH--HHHHHHHHHCCCEEEEEeCC
Confidence 46777754 4333 46789999999999987653
No 180
>2zkq_b 40S ribosomal protein SA; protein-RNA complex, 40S ribosomal subunit, ribosomal protein/RNA complex; 8.70A {Canis familiaris}
Probab=55.94 E-value=10 Score=28.13 Aligned_cols=30 Identities=10% Similarity=0.061 Sum_probs=22.7
Q ss_pred CccEEE-ecCCCc-cHHHHHHHhCCccEEEcc
Q 040291 107 KLDCFI-ADGYMA-WSMEVAKKMNVRGALFWP 136 (160)
Q Consensus 107 ~~d~vI-~D~~~~-~~~~~A~~lgiP~i~~~~ 136 (160)
.||+|| .|+..- -+..=|.++|||.|.+.-
T Consensus 118 ~PdlliV~Dp~~e~~AI~EA~~lgIPvIalvD 149 (295)
T 2zkq_b 118 EPRLLVVTDPRADHQPLTEASYVNLPTIALCN 149 (295)
T ss_dssp CCSEEEESCTTTTHHHHHHHHHHTCCEEEEEC
T ss_pred CCCeEEEeCCCcchhHHHHHHHhCCCEEEEec
Confidence 578765 888664 356679999999999843
No 181
>3b2n_A Uncharacterized protein Q99UF4; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics; 2.04A {Staphylococcus aureus}
Probab=55.91 E-value=19 Score=21.94 Aligned_cols=32 Identities=19% Similarity=0.143 Sum_probs=20.7
Q ss_pred CCccEEEecCCCcc--HHHHHHHh-----CCccEEEccc
Q 040291 106 EKLDCFIADGYMAW--SMEVAKKM-----NVRGALFWPS 137 (160)
Q Consensus 106 ~~~d~vI~D~~~~~--~~~~A~~l-----giP~i~~~~~ 137 (160)
.+||+||.|...+. +..+.+++ ++|.+.+...
T Consensus 48 ~~~dlvilD~~lp~~~g~~~~~~l~~~~~~~~ii~ls~~ 86 (133)
T 3b2n_A 48 YNPNVVILDIEMPGMTGLEVLAEIRKKHLNIKVIIVTTF 86 (133)
T ss_dssp HCCSEEEECSSCSSSCHHHHHHHHHHTTCSCEEEEEESC
T ss_pred cCCCEEEEecCCCCCCHHHHHHHHHHHCCCCcEEEEecC
Confidence 46899999987643 44444333 4787777553
No 182
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=55.76 E-value=18 Score=25.84 Aligned_cols=35 Identities=20% Similarity=0.258 Sum_probs=24.9
Q ss_pred CCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCC
Q 040291 3 RPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTD 40 (160)
Q Consensus 3 ~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~ 40 (160)
+.++++++.++.| -=..++++|+++|++|.++.-.
T Consensus 11 ~~k~vlITGas~G---IG~~~a~~L~~~G~~V~~~~r~ 45 (311)
T 3o26_A 11 KRRCAVVTGGNKG---IGFEICKQLSSNGIMVVLTCRD 45 (311)
T ss_dssp -CCEEEESSCSSH---HHHHHHHHHHHTTCEEEEEESC
T ss_pred CCcEEEEecCCch---HHHHHHHHHHHCCCEEEEEeCC
Confidence 4567788855543 2357899999999999887643
No 183
>3a10_A Response regulator; phosphoacceptor, signaling protein; HET: MSE PG4; 1.63A {Thermotoga maritima} PDB: 3a0r_B* 3a0u_A*
Probab=55.65 E-value=29 Score=20.32 Aligned_cols=32 Identities=25% Similarity=0.210 Sum_probs=20.7
Q ss_pred CCccEEEecCCCcc--HHHHHHHh-----CCccEEEccc
Q 040291 106 EKLDCFIADGYMAW--SMEVAKKM-----NVRGALFWPS 137 (160)
Q Consensus 106 ~~~d~vI~D~~~~~--~~~~A~~l-----giP~i~~~~~ 137 (160)
.+||++|.|...+. +..+.+++ ++|.+.+...
T Consensus 44 ~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~ 82 (116)
T 3a10_A 44 GNYDLVILDIEMPGISGLEVAGEIRKKKKDAKIILLTAY 82 (116)
T ss_dssp SCCSEEEECSCCSSSCHHHHHHHHHHHCTTCCEEEEESC
T ss_pred CCCCEEEEECCCCCCCHHHHHHHHHccCCCCeEEEEECC
Confidence 47999999987643 44444333 4777776543
No 184
>1tmy_A CHEY protein, TMY; chemotaxis, phosphoryl transfer, signal transduction; 1.90A {Thermotoga maritima} SCOP: c.23.1.1 PDB: 2tmy_A 3tmy_A 4tmy_A 1u0s_Y
Probab=55.60 E-value=22 Score=21.04 Aligned_cols=32 Identities=19% Similarity=0.094 Sum_probs=20.6
Q ss_pred CCccEEEecCCCcc--HHHHHHHh-----CCccEEEccc
Q 040291 106 EKLDCFIADGYMAW--SMEVAKKM-----NVRGALFWPS 137 (160)
Q Consensus 106 ~~~d~vI~D~~~~~--~~~~A~~l-----giP~i~~~~~ 137 (160)
.+||+||.|...+. +..+.+++ ++|.+.+...
T Consensus 46 ~~~dlil~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~ 84 (120)
T 1tmy_A 46 LKPDIVTMDITMPEMNGIDAIKEIMKIDPNAKIIVCSAM 84 (120)
T ss_dssp HCCSEEEEECSCGGGCHHHHHHHHHHHCTTCCEEEEECT
T ss_pred cCCCEEEEeCCCCCCcHHHHHHHHHhhCCCCeEEEEeCC
Confidence 36899999987653 44444433 5777776554
No 185
>4fbl_A LIPS lipolytic enzyme; thermostable, structural genomics, enzyme function initiativ structural proteomics in europe, spine; HET: SPD; 1.99A {Unidentified} PDB: 4fbm_A
Probab=55.50 E-value=11 Score=26.70 Aligned_cols=32 Identities=13% Similarity=0.221 Sum_probs=25.7
Q ss_pred EEEcCCCCCChHHHHHHHHHHHhCCCEEEEEe
Q 040291 7 LVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVN 38 (160)
Q Consensus 7 ~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~ 38 (160)
+++-.+..|+-.-+..+++.|+++|++|..+-
T Consensus 54 VlllHG~~~s~~~~~~la~~La~~Gy~Via~D 85 (281)
T 4fbl_A 54 VLVSHGFTGSPQSMRFLAEGFARAGYTVATPR 85 (281)
T ss_dssp EEEECCTTCCGGGGHHHHHHHHHTTCEEEECC
T ss_pred EEEECCCCCCHHHHHHHHHHHHHCCCEEEEEC
Confidence 34456777888888999999999999988754
No 186
>2x5n_A SPRPN10, 26S proteasome regulatory subunit RPN10; nuclear protein, nucleus, ubiquitin; 1.30A {Schizosaccharomyces pombe}
Probab=55.46 E-value=26 Score=23.78 Aligned_cols=34 Identities=12% Similarity=0.240 Sum_probs=22.3
Q ss_pred EEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeC
Q 040291 6 VLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNT 39 (160)
Q Consensus 6 i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~ 39 (160)
|+++..+...+-.....+++.+.++|++|.++.-
T Consensus 110 iil~~~~~~~~~~~~~~~a~~lk~~gi~v~~Ig~ 143 (192)
T 2x5n_A 110 VAFVGSPIVEDEKNLIRLAKRMKKNNVAIDIIHI 143 (192)
T ss_dssp EEEECSCCSSCHHHHHHHHHHHHHTTEEEEEEEE
T ss_pred EEEEECCCCCCchhHHHHHHHHHHCCCEEEEEEe
Confidence 3444444545566677778888888888877653
No 187
>2rdm_A Response regulator receiver protein; structural genomics, unknown function, PSI-2, protein struct initiative; HET: MSE; 1.76A {Sinorhizobium medicae}
Probab=55.46 E-value=29 Score=20.85 Aligned_cols=41 Identities=20% Similarity=0.161 Sum_probs=24.6
Q ss_pred HHHHHHHhcCCCC-CccEEEecCCCcc---HHHHHHHh-----CCccEEEccc
Q 040291 94 EELIEDINSREDE-KLDCFIADGYMAW---SMEVAKKM-----NVRGALFWPS 137 (160)
Q Consensus 94 ~~ll~~l~~~~~~-~~d~vI~D~~~~~---~~~~A~~l-----giP~i~~~~~ 137 (160)
++.++.+.+ . +||+||.|..... +..+.+++ ++|.+.+...
T Consensus 39 ~~a~~~l~~---~~~~dlvi~d~~l~~~~~g~~~~~~l~~~~~~~~ii~~s~~ 88 (132)
T 2rdm_A 39 AKAIEMLKS---GAAIDGVVTDIRFCQPPDGWQVARVAREIDPNMPIVYISGH 88 (132)
T ss_dssp HHHHHHHHT---TCCCCEEEEESCCSSSSCHHHHHHHHHHHCTTCCEEEEESS
T ss_pred HHHHHHHHc---CCCCCEEEEeeeCCCCCCHHHHHHHHHhcCCCCCEEEEeCC
Confidence 444444443 3 7999999986542 44444333 5788877554
No 188
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=55.39 E-value=10 Score=28.33 Aligned_cols=34 Identities=18% Similarity=0.138 Sum_probs=24.5
Q ss_pred CCCCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeC
Q 040291 1 MNRPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNT 39 (160)
Q Consensus 1 m~~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~ 39 (160)
|+..+|+|+-.+..| +.+|..|+++|++|+++--
T Consensus 9 m~~~dVvIVGaG~aG-----l~~A~~L~~~G~~v~viE~ 42 (379)
T 3alj_A 9 GKTRRAEVAGGGFAG-----LTAAIALKQNGWDVRLHEK 42 (379)
T ss_dssp --CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred CCCCeEEEECCCHHH-----HHHHHHHHHCCCCEEEEec
Confidence 344578777655444 6788899999999999853
No 189
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=55.24 E-value=3.5 Score=32.40 Aligned_cols=35 Identities=20% Similarity=0.273 Sum_probs=26.8
Q ss_pred CCCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCCC
Q 040291 2 NRPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDY 41 (160)
Q Consensus 2 ~~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~ 41 (160)
+.|||+++-.+-.| ..||+.|.+.||+||++=...
T Consensus 2 ~~M~iiI~G~G~vG-----~~la~~L~~~~~~v~vId~d~ 36 (461)
T 4g65_A 2 NAMKIIILGAGQVG-----GTLAENLVGENNDITIVDKDG 36 (461)
T ss_dssp CCEEEEEECCSHHH-----HHHHHHTCSTTEEEEEEESCH
T ss_pred CcCEEEEECCCHHH-----HHHHHHHHHCCCCEEEEECCH
Confidence 45788887665555 468999999999999986653
No 190
>1xhf_A DYE resistance, aerobic respiration control protein ARCA; two-component system, gene regulation, transcription factor, anoxic redox control; 2.15A {Escherichia coli} SCOP: c.23.1.1 PDB: 1xhe_A
Probab=55.23 E-value=29 Score=20.52 Aligned_cols=32 Identities=16% Similarity=0.113 Sum_probs=20.9
Q ss_pred CCccEEEecCCCcc--HHHHHHH----hCCccEEEccc
Q 040291 106 EKLDCFIADGYMAW--SMEVAKK----MNVRGALFWPS 137 (160)
Q Consensus 106 ~~~d~vI~D~~~~~--~~~~A~~----lgiP~i~~~~~ 137 (160)
.+||++|.|...+. +..+.++ -++|.+.+...
T Consensus 46 ~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~ii~~s~~ 83 (123)
T 1xhf_A 46 YDINLVIMDINLPGKNGLLLARELREQANVALMFLTGR 83 (123)
T ss_dssp SCCSEEEECSSCSSSCHHHHHHHHHHHCCCEEEEEESC
T ss_pred CCCCEEEEcCCCCCCCHHHHHHHHHhCCCCcEEEEECC
Confidence 47899999986643 4444433 36787776554
No 191
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=55.16 E-value=23 Score=21.34 Aligned_cols=42 Identities=12% Similarity=0.092 Sum_probs=23.7
Q ss_pred HHHHHHHHhcCCCCCccEEEecCCCcc--HHHHHHHh-----CCccEEEccc
Q 040291 93 LEELIEDINSREDEKLDCFIADGYMAW--SMEVAKKM-----NVRGALFWPS 137 (160)
Q Consensus 93 ~~~ll~~l~~~~~~~~d~vI~D~~~~~--~~~~A~~l-----giP~i~~~~~ 137 (160)
.++.++.+.+ .+||+||.|...+. +..+.+++ ++|.+.+...
T Consensus 40 ~~~a~~~l~~---~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~~t~~ 88 (130)
T 3eod_A 40 GVDALELLGG---FTPDLMICDIAMPRMNGLKLLEHIRNRGDQTPVLVISAT 88 (130)
T ss_dssp HHHHHHHHTT---CCCSEEEECCC-----CHHHHHHHHHTTCCCCEEEEECC
T ss_pred HHHHHHHHhc---CCCCEEEEecCCCCCCHHHHHHHHHhcCCCCCEEEEEcC
Confidence 3445555543 57999999986643 33333332 5787777554
No 192
>3kht_A Response regulator; PSI-II, 11023K, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.10A {Hahella chejuensis} SCOP: c.23.1.0
Probab=55.15 E-value=31 Score=21.19 Aligned_cols=42 Identities=14% Similarity=0.103 Sum_probs=25.4
Q ss_pred HHHHHHHHhcCCCCCccEEEecCCCcc--HHHHHHH-------hCCccEEEccc
Q 040291 93 LEELIEDINSREDEKLDCFIADGYMAW--SMEVAKK-------MNVRGALFWPS 137 (160)
Q Consensus 93 ~~~ll~~l~~~~~~~~d~vI~D~~~~~--~~~~A~~-------lgiP~i~~~~~ 137 (160)
.++.++.+.. .+||+||.|...+. +..+.++ -++|.+.+...
T Consensus 40 ~~~a~~~l~~---~~~dlii~D~~l~~~~g~~~~~~lr~~~~~~~~pii~~s~~ 90 (144)
T 3kht_A 40 GAKALYQVQQ---AKYDLIILDIGLPIANGFEVMSAVRKPGANQHTPIVILTDN 90 (144)
T ss_dssp HHHHHHHHTT---CCCSEEEECTTCGGGCHHHHHHHHHSSSTTTTCCEEEEETT
T ss_pred HHHHHHHhhc---CCCCEEEEeCCCCCCCHHHHHHHHHhcccccCCCEEEEeCC
Confidence 3455555543 57899999987654 3444432 24777776653
No 193
>4f0j_A Probable hydrolytic enzyme; alpha/beta hydrolase fold, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.50A {Pseudomonas aeruginosa}
Probab=55.08 E-value=19 Score=25.10 Aligned_cols=35 Identities=20% Similarity=0.116 Sum_probs=27.1
Q ss_pred EEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCC
Q 040291 6 VLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTD 40 (160)
Q Consensus 6 i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~ 40 (160)
.+++-.+..|+..-+..+++.|+++|++|..+--.
T Consensus 48 ~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 82 (315)
T 4f0j_A 48 TILLMHGKNFCAGTWERTIDVLADAGYRVIAVDQV 82 (315)
T ss_dssp EEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCT
T ss_pred eEEEEcCCCCcchHHHHHHHHHHHCCCeEEEeecC
Confidence 44444566677777899999999999999887644
No 194
>1p6q_A CHEY2; chemotaxis, signal transduction, response regulator, structural proteomics in europe, spine, structural genomics; NMR {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1p6u_A
Probab=54.96 E-value=28 Score=20.85 Aligned_cols=41 Identities=10% Similarity=0.057 Sum_probs=24.4
Q ss_pred HHHHHHHhcCCCCCccEEEecCCCcc--HHHHHHHh-------CCccEEEccc
Q 040291 94 EELIEDINSREDEKLDCFIADGYMAW--SMEVAKKM-------NVRGALFWPS 137 (160)
Q Consensus 94 ~~ll~~l~~~~~~~~d~vI~D~~~~~--~~~~A~~l-------giP~i~~~~~ 137 (160)
++.++.+.. .+||+||.|.-.+. +..+.+++ ++|.+.+...
T Consensus 41 ~~a~~~~~~---~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~ 90 (129)
T 1p6q_A 41 EQGMKIMAQ---NPHHLVISDFNMPKMDGLGLLQAVRANPATKKAAFIILTAQ 90 (129)
T ss_dssp HHHHHHHHT---SCCSEEEECSSSCSSCHHHHHHHHTTCTTSTTCEEEECCSC
T ss_pred HHHHHHHHc---CCCCEEEEeCCCCCCCHHHHHHHHhcCccccCCCEEEEeCC
Confidence 444444433 47899999987643 55555544 3566665443
No 195
>1byr_A Protein (endonuclease); phosphodiesterase,; 2.00A {Salmonella typhimurium} SCOP: d.136.1.1 PDB: 1bys_A
Probab=54.66 E-value=33 Score=21.78 Aligned_cols=38 Identities=11% Similarity=0.155 Sum_probs=21.1
Q ss_pred CCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCCCC
Q 040291 3 RPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYD 42 (160)
Q Consensus 3 ~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~~ 42 (160)
+.+|.+..+-. .. ..+..--.+.++||.+|.+++....
T Consensus 27 ~~~I~i~~~~~-~~-~~i~~aL~~a~~rGV~Vril~~~~~ 64 (155)
T 1byr_A 27 KTSIRMMAYSF-TA-PDIMKALVAAKKRGVDVKIVIDERG 64 (155)
T ss_dssp SSEEEEEESSB-CC-HHHHHHHHHHHHTTCEEEEEEESTT
T ss_pred hhEEEEEEEEe-CC-HHHHHHHHHHHHCCCEEEEEEeCcc
Confidence 44566655333 22 2333333444568888888876543
No 196
>1b93_A Protein (methylglyoxal synthase); glycolytic bypass, lyase; 1.90A {Escherichia coli} SCOP: c.24.1.2 PDB: 1egh_A 1ik4_A* 1s8a_A 1s89_A
Probab=54.63 E-value=36 Score=22.47 Aligned_cols=90 Identities=16% Similarity=0.082 Sum_probs=54.3
Q ss_pred CCChHHHHHHHHHHHhC--CCEEEEEeCCCChhhHHhhhccCCCCCCCeeeeecCCCCCCCCCcccHHHHHHHHHHhccH
Q 040291 14 QGHVIPLLEFSQCLAKQ--GFRVTFVNTDYDHKRIMESLEGKNDLGEQIRLVSIPDGMEPWEDRNDFGKLFEKVLQVMPG 91 (160)
Q Consensus 14 ~GH~~P~l~la~~L~~r--Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (160)
-..-.-++++|+++.+. ||++ +.|....+.+... .|+....+-.+ +++ .++
T Consensus 20 D~dK~~~v~~ak~~~~ll~Gf~l--~AT~gTa~~L~e~--------~Gl~v~~v~k~-~eG----------------G~p 72 (152)
T 1b93_A 20 DHCKQMLMSWVERHQPLLEQHVL--YATGTTGNLISRA--------TGMNVNAMLSG-PMG----------------GDQ 72 (152)
T ss_dssp GGGHHHHHHHHHHTHHHHTTSEE--EEETTHHHHHHHH--------HCCCCEEECCG-GGT----------------HHH
T ss_pred hhhHHHHHHHHHHHHHHhCCCEE--EEccHHHHHHHHH--------hCceeEEEEec-CCC----------------CCc
Confidence 44556789999999998 9965 4666666556441 25655544211 110 122
Q ss_pred HHHHHHHHHhcCCCCCccEEE--ecCCCcc--------HHHHHHHhCCccEEEcc
Q 040291 92 KLEELIEDINSREDEKLDCFI--ADGYMAW--------SMEVAKKMNVRGALFWP 136 (160)
Q Consensus 92 ~~~~ll~~l~~~~~~~~d~vI--~D~~~~~--------~~~~A~~lgiP~i~~~~ 136 (160)
++.+++++ .+.|+|| .|++..- ..-+|-.+|||+++-..
T Consensus 73 ~I~d~I~~------geIdlVInt~~pl~~~~h~~D~~~IrR~A~~~~IP~~T~la 121 (152)
T 1b93_A 73 QVGALISE------GKIDVLIFFWDPLNAVPHDPDVKALLRLATVWNIPVATNVA 121 (152)
T ss_dssp HHHHHHHT------TCCCEEEEECCTTSCCTTHHHHHHHHHHHHHTTCCEESSHH
T ss_pred hHHHHHHC------CCccEEEEcCCcccCCcccccHHHHHHHHHHcCCCEEeCHH
Confidence 34455544 6899999 4532321 24578999999987543
No 197
>2qs7_A Uncharacterized protein; putative oxidoreductase of the DSRE/DSRF-like family, struct genomics, joint center for structural genomics; HET: MSE EPE; 2.09A {Sulfolobus solfataricus P2}
Probab=54.63 E-value=20 Score=23.20 Aligned_cols=40 Identities=13% Similarity=0.223 Sum_probs=29.9
Q ss_pred eEEEEc-CCCCCChHHHHHHHHHHHhCCCEEEEEeCCCChh
Q 040291 5 HVLVLP-IPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHK 44 (160)
Q Consensus 5 ~i~~~~-~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~~~~ 44 (160)
+++++- .+..-...+.+.+|...++.|++|+++-+..-..
T Consensus 9 kl~II~~sg~~d~~~~a~~lA~~Aaa~g~eV~iF~t~~gv~ 49 (144)
T 2qs7_A 9 KLSIIVFSGTIDKLMPVGILTSGAAASGYEVNLFFTFWGLQ 49 (144)
T ss_dssp EEEEEECCCSHHHHHHHHHHHHHHHHTTCEEEEEECHHHHH
T ss_pred CEEEEEEcCCHHHHHHHHHHHHHHHHcCCcEEEEEehHHHH
Confidence 455444 4445667888999999999999999998875443
No 198
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*
Probab=54.35 E-value=30 Score=24.02 Aligned_cols=37 Identities=16% Similarity=0.253 Sum_probs=25.9
Q ss_pred CCCCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCC
Q 040291 1 MNRPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTD 40 (160)
Q Consensus 1 m~~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~ 40 (160)
|-+.+.++++.++.| + =..++++|+++|++|.++...
T Consensus 1 Ml~~k~~lVTGas~g-I--G~~ia~~l~~~G~~V~~~~~~ 37 (246)
T 3osu_A 1 MKMTKSALVTGASRG-I--GRSIALQLAEEGYNVAVNYAG 37 (246)
T ss_dssp CCCSCEEEETTCSSH-H--HHHHHHHHHHTTCEEEEEESS
T ss_pred CCCCCEEEEECCCCh-H--HHHHHHHHHHCCCEEEEEeCC
Confidence 445567777754432 2 357899999999999887553
No 199
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=54.30 E-value=11 Score=27.83 Aligned_cols=30 Identities=23% Similarity=0.356 Sum_probs=23.9
Q ss_pred CCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEE
Q 040291 3 RPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFV 37 (160)
Q Consensus 3 ~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~ 37 (160)
.++|+++-.++.| ..+|..|++.||+|+++
T Consensus 19 ~~kI~IiGaGa~G-----~~~a~~L~~~G~~V~l~ 48 (318)
T 3hwr_A 19 GMKVAIMGAGAVG-----CYYGGMLARAGHEVILI 48 (318)
T ss_dssp -CEEEEESCSHHH-----HHHHHHHHHTTCEEEEE
T ss_pred CCcEEEECcCHHH-----HHHHHHHHHCCCeEEEE
Confidence 5678888766666 45788999999999999
No 200
>1zgz_A Torcad operon transcriptional regulatory protein; two-component system, gene regulation, transcription factor, respiratory system; 1.80A {Escherichia coli} SCOP: c.23.1.1
Probab=54.27 E-value=29 Score=20.54 Aligned_cols=32 Identities=13% Similarity=0.119 Sum_probs=20.8
Q ss_pred CCccEEEecCCCcc--HHHHHHHh----CCccEEEccc
Q 040291 106 EKLDCFIADGYMAW--SMEVAKKM----NVRGALFWPS 137 (160)
Q Consensus 106 ~~~d~vI~D~~~~~--~~~~A~~l----giP~i~~~~~ 137 (160)
.+||++|.|.-.+. +..+.+++ ++|.+.+...
T Consensus 45 ~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~ii~~s~~ 82 (122)
T 1zgz_A 45 QSVDLILLDINLPDENGLMLTRALRERSTVGIILVTGR 82 (122)
T ss_dssp SCCSEEEEESCCSSSCHHHHHHHHHTTCCCEEEEEESS
T ss_pred CCCCEEEEeCCCCCCChHHHHHHHHhcCCCCEEEEECC
Confidence 47899999986643 44555443 5777776543
No 201
>2etv_A Iron(III) ABC transporter, periplasmic iron-bindi protein, putative; periplasmic iron-binding protein, structural genomics; HET: MLY; 1.70A {Thermotoga maritima} SCOP: c.92.2.4
Probab=54.14 E-value=17 Score=27.06 Aligned_cols=38 Identities=13% Similarity=0.060 Sum_probs=25.5
Q ss_pred HHHHHHHHHhcCCCCCccEEEecCCCcc-HHHHHHHhCCccEEEcc
Q 040291 92 KLEELIEDINSREDEKLDCFIADGYMAW-SMEVAKKMNVRGALFWP 136 (160)
Q Consensus 92 ~~~~ll~~l~~~~~~~~d~vI~D~~~~~-~~~~A~~lgiP~i~~~~ 136 (160)
.++.+++. +||+||....... ...+.+++|||++.+..
T Consensus 88 n~E~Ilal-------~PDLIi~~~~~~~~~~~~~~~~GiPvv~~~~ 126 (346)
T 2etv_A 88 DLESLITL-------QPDVVFITYVDRXTAXDIQEXTGIPVVVLSY 126 (346)
T ss_dssp CHHHHHHH-------CCSEEEEESCCHHHHHHHHHHHTSCEEEECC
T ss_pred CHHHHhcC-------CCCEEEEeCCccchHHHHHHhcCCcEEEEec
Confidence 45666653 7999997654221 23456788999999854
No 202
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=54.13 E-value=20 Score=28.20 Aligned_cols=38 Identities=8% Similarity=0.044 Sum_probs=29.0
Q ss_pred CCeEEEEcCCCCCC--hHHHHHHHHH--HHhCCCEEEEEeCC
Q 040291 3 RPHVLVLPIPAQGH--VIPLLEFSQC--LAKQGFRVTFVNTD 40 (160)
Q Consensus 3 ~~~i~~~~~p~~GH--~~P~l~la~~--L~~rGh~Vt~~~~~ 40 (160)
++||+++.....+| -.-+..+++. |.++||+|++++..
T Consensus 205 ~~rI~~~~~~~~~~g~~~~~~~l~~~L~~~~~~~~v~~~~~~ 246 (568)
T 2vsy_A 205 PLRVGFVSNGFGAHPTGLLTVALFEALQRRQPDLQMHLFATS 246 (568)
T ss_dssp CEEEEEEESCSSSSHHHHHHHHHHHHHHHHCTTEEEEEEESS
T ss_pred CeEEEEECcccccChHHHHHHHHHhhccCCcccEEEEEEECC
Confidence 46899888665544 3557789999 67789999999874
No 203
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=54.09 E-value=13 Score=26.54 Aligned_cols=31 Identities=29% Similarity=0.188 Sum_probs=23.1
Q ss_pred eEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCC
Q 040291 5 HVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTD 40 (160)
Q Consensus 5 ~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~ 40 (160)
+|+++-.+..| ..+++.|+++||+|+++...
T Consensus 2 ~i~iiG~G~~G-----~~~a~~l~~~g~~V~~~~r~ 32 (291)
T 1ks9_A 2 KITVLGCGALG-----QLWLTALCKQGHEVQGWLRV 32 (291)
T ss_dssp EEEEECCSHHH-----HHHHHHHHHTTCEEEEECSS
T ss_pred eEEEECcCHHH-----HHHHHHHHhCCCCEEEEEcC
Confidence 57776554444 36789999999999998654
No 204
>4eg0_A D-alanine--D-alanine ligase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.65A {Burkholderia ambifaria} PDB: 4egq_A 4egj_A
Probab=54.09 E-value=32 Score=25.00 Aligned_cols=39 Identities=15% Similarity=-0.032 Sum_probs=29.3
Q ss_pred CCeEEEEcCCCCCC-----hHHHHHHHHHHHhCCCEEEEEeCCCC
Q 040291 3 RPHVLVLPIPAQGH-----VIPLLEFSQCLAKQGFRVTFVNTDYD 42 (160)
Q Consensus 3 ~~~i~~~~~p~~GH-----~~P~l~la~~L~~rGh~Vt~~~~~~~ 42 (160)
+.||+++.. +.+. +..-..++++|.++||+|..+.+...
T Consensus 13 ~~~v~vl~g-g~s~E~~vsl~s~~~v~~al~~~g~~v~~i~~~~~ 56 (317)
T 4eg0_A 13 FGKVAVLFG-GESAEREVSLTSGRLVLQGLRDAGIDAHPFDPAER 56 (317)
T ss_dssp GCEEEEECC-CSSTTHHHHHHHHHHHHHHHHHTTCEEEEECTTTS
T ss_pred cceEEEEEC-CCCCcceeeHHHHHHHHHHHHHCCCEEEEEeCCCc
Confidence 467887774 4443 35678999999999999999986543
No 205
>3j20_B 30S ribosomal protein S2P; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=53.95 E-value=11 Score=26.36 Aligned_cols=29 Identities=17% Similarity=0.146 Sum_probs=22.0
Q ss_pred CccEEE-ecCCCc-cHHHHHHHhCCccEEEc
Q 040291 107 KLDCFI-ADGYMA-WSMEVAKKMNVRGALFW 135 (160)
Q Consensus 107 ~~d~vI-~D~~~~-~~~~~A~~lgiP~i~~~ 135 (160)
.||++| .|+-.- -+..-|.++|||.|.+.
T Consensus 111 ~Pdllvv~Dp~~d~~ai~EA~~l~IP~Ial~ 141 (202)
T 3j20_B 111 EPDVLIVTDPRADHQAMREAVEIGIPIVALV 141 (202)
T ss_dssp CCSEEEESCTTTSHHHHHHHHHHTCCEEEEE
T ss_pred CCCeEEEeCCccchHHHHHHHHcCCCEEEEE
Confidence 578655 888664 35667999999999875
No 206
>4dim_A Phosphoribosylglycinamide synthetase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ligase; 2.61A {Anaerococcus prevotii}
Probab=53.89 E-value=18 Score=27.29 Aligned_cols=36 Identities=11% Similarity=0.105 Sum_probs=26.8
Q ss_pred CCCCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCCC
Q 040291 1 MNRPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDY 41 (160)
Q Consensus 1 m~~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~ 41 (160)
|...+|+++-.+.. -+.+++++.+.|++|.++..+.
T Consensus 5 ~~~~~ilI~g~g~~-----~~~~~~a~~~~G~~~v~v~~~~ 40 (403)
T 4dim_A 5 YDNKRLLILGAGRG-----QLGLYKAAKELGIHTIAGTMPN 40 (403)
T ss_dssp -CCCEEEEECCCGG-----GHHHHHHHHHHTCEEEEEECSS
T ss_pred cCCCEEEEECCcHh-----HHHHHHHHHHCCCEEEEEcCCC
Confidence 45678888865543 3669999999999999997643
No 207
>1srr_A SPO0F, sporulation response regulatory protein; aspartate pocket, two component system; 1.90A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 1pey_A 3q15_C 2ftk_E* 1fsp_A 1nat_A 1pux_A 2fsp_A 2jvj_A 2jvk_A 2jvi_A 1f51_E
Probab=53.81 E-value=21 Score=21.32 Aligned_cols=32 Identities=25% Similarity=0.337 Sum_probs=20.6
Q ss_pred CCccEEEecCCCcc--HHHHHHHh-----CCccEEEccc
Q 040291 106 EKLDCFIADGYMAW--SMEVAKKM-----NVRGALFWPS 137 (160)
Q Consensus 106 ~~~d~vI~D~~~~~--~~~~A~~l-----giP~i~~~~~ 137 (160)
.+||++|.|.-.+. +..+++++ ++|.+.+...
T Consensus 46 ~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~ 84 (124)
T 1srr_A 46 ERPDLVLLDMKIPGMDGIEILKRMKVIDENIRVIIMTAY 84 (124)
T ss_dssp HCCSEEEEESCCTTCCHHHHHHHHHHHCTTCEEEEEESS
T ss_pred cCCCEEEEecCCCCCCHHHHHHHHHHhCCCCCEEEEEcc
Confidence 36899999986643 44444333 5787777554
No 208
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=53.79 E-value=11 Score=27.31 Aligned_cols=33 Identities=9% Similarity=0.036 Sum_probs=26.2
Q ss_pred CCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCC
Q 040291 3 RPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTD 40 (160)
Q Consensus 3 ~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~ 40 (160)
+++|.++-.+..|. .+++.|+++||+|+++...
T Consensus 15 ~~~I~vIG~G~mG~-----~~A~~l~~~G~~V~~~dr~ 47 (296)
T 3qha_A 15 QLKLGYIGLGNMGA-----PMATRMTEWPGGVTVYDIR 47 (296)
T ss_dssp CCCEEEECCSTTHH-----HHHHHHTTSTTCEEEECSS
T ss_pred CCeEEEECcCHHHH-----HHHHHHHHCCCeEEEEeCC
Confidence 46899987766663 6799999999999988654
No 209
>3lte_A Response regulator; structural genomics, PSI, protein structure initiative, NYSG YORK structural genomix research consortium, nysgxrc; 2.00A {Bermanella marisrubri}
Probab=53.74 E-value=30 Score=20.82 Aligned_cols=41 Identities=12% Similarity=0.042 Sum_probs=23.0
Q ss_pred HHHHHHHhcCCCCCccEEEecCCCcc--HHHHHHHh------CCccEEEccc
Q 040291 94 EELIEDINSREDEKLDCFIADGYMAW--SMEVAKKM------NVRGALFWPS 137 (160)
Q Consensus 94 ~~ll~~l~~~~~~~~d~vI~D~~~~~--~~~~A~~l------giP~i~~~~~ 137 (160)
++.++.+.+ .+||+||.|...+. +..+.+++ ..|.+.+.+.
T Consensus 40 ~~a~~~l~~---~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~~~ii~~~~ 88 (132)
T 3lte_A 40 FDAGIKLST---FEPAIMTLDLSMPKLDGLDVIRSLRQNKVANQPKILVVSG 88 (132)
T ss_dssp HHHHHHHHH---TCCSEEEEESCBTTBCHHHHHHHHHTTTCSSCCEEEEECC
T ss_pred HHHHHHHHh---cCCCEEEEecCCCCCCHHHHHHHHHhcCccCCCeEEEEeC
Confidence 344444433 57899999987643 44444433 3455555443
No 210
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=53.64 E-value=9.3 Score=28.88 Aligned_cols=33 Identities=18% Similarity=0.328 Sum_probs=26.3
Q ss_pred CCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCC
Q 040291 3 RPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTD 40 (160)
Q Consensus 3 ~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~ 40 (160)
.++|.++-.+..| ..+|+.|++.||+|+++...
T Consensus 29 ~mkI~VIGaG~mG-----~alA~~La~~G~~V~l~~r~ 61 (356)
T 3k96_A 29 KHPIAILGAGSWG-----TALALVLARKGQKVRLWSYE 61 (356)
T ss_dssp CSCEEEECCSHHH-----HHHHHHHHTTTCCEEEECSC
T ss_pred CCeEEEECccHHH-----HHHHHHHHHCCCeEEEEeCC
Confidence 5688888766665 35889999999999998764
No 211
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=53.56 E-value=11 Score=27.86 Aligned_cols=33 Identities=24% Similarity=0.258 Sum_probs=25.6
Q ss_pred CCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCC
Q 040291 3 RPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTD 40 (160)
Q Consensus 3 ~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~ 40 (160)
.++|.++-.+..| ..+++.|++.||+|+++...
T Consensus 14 ~~kI~iIG~G~mG-----~ala~~L~~~G~~V~~~~r~ 46 (335)
T 1z82_A 14 EMRFFVLGAGSWG-----TVFAQMLHENGEEVILWARR 46 (335)
T ss_dssp CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSS
T ss_pred CCcEEEECcCHHH-----HHHHHHHHhCCCeEEEEeCC
Confidence 3578887666656 46889999999999998654
No 212
>2a9o_A Response regulator; essential protein, YYCF/YYCG homolog, signaling protein; 1.65A {Streptococcus pneumoniae} SCOP: c.23.1.1 PDB: 1nxo_A 1nxs_A 1nxv_A 1nxw_A 1nxx_A 1nxp_A 2a9p_A 2a9q_A 1nxt_A* 2a9r_A*
Probab=53.44 E-value=25 Score=20.65 Aligned_cols=33 Identities=27% Similarity=0.241 Sum_probs=21.3
Q ss_pred CCccEEEecCCCcc--HHHHHHH----hCCccEEEccch
Q 040291 106 EKLDCFIADGYMAW--SMEVAKK----MNVRGALFWPSS 138 (160)
Q Consensus 106 ~~~d~vI~D~~~~~--~~~~A~~----lgiP~i~~~~~~ 138 (160)
.+||++|.|...+. +..+.++ -++|.+.+....
T Consensus 44 ~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~ii~~s~~~ 82 (120)
T 2a9o_A 44 EQPDIIILDLMLPEIDGLEVAKTIRKTSSVPILMLSAKD 82 (120)
T ss_dssp HCCSEEEECSSCSSSCHHHHHHHHHHHCCCCEEEEESCC
T ss_pred CCCCEEEEeccCCCCCHHHHHHHHHhCCCCCEEEEecCC
Confidence 46899999986643 4444433 468888776543
No 213
>1meo_A Phosophoribosylglycinamide formyltransferase; purine biosynthesis; 1.72A {Homo sapiens} SCOP: c.65.1.1 PDB: 1njs_A* 1rbm_A* 1rbq_A* 1rby_A* 1rbz_A* 1rc0_A* 1rc1_A* 1zly_A* 1zlx_A* 1mej_B 1men_A*
Probab=53.10 E-value=26 Score=24.32 Aligned_cols=45 Identities=13% Similarity=0.259 Sum_probs=31.0
Q ss_pred HHHHHHHHHhcCC-CCCccEEEecCCCccHHHHHHHhCCccEEEcc
Q 040291 92 KLEELIEDINSRE-DEKLDCFIADGYMAWSMEVAKKMNVRGALFWP 136 (160)
Q Consensus 92 ~~~~ll~~l~~~~-~~~~d~vI~D~~~~~~~~~A~~lgiP~i~~~~ 136 (160)
.++.+++...+.. +....+||++.--..+...|+++|||+..+.+
T Consensus 13 ~L~aLi~~~~~~~~~~~I~~Vvs~~~~~~~~~~A~~~gIp~~~~~~ 58 (209)
T 1meo_A 13 NLQALIDSTREPNSSAQIDIVISNKAAVAGLDKAERAGIPTRVINH 58 (209)
T ss_dssp THHHHHHHHHSTTCSCEEEEEEESSTTCHHHHHHHHTTCCEEECCG
T ss_pred HHHHHHHHHhcCCCCcEEEEEEeCCCChHHHHHHHHcCCCEEEECc
Confidence 3566666654321 12456788887666677889999999998765
No 214
>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}
Probab=52.84 E-value=35 Score=23.61 Aligned_cols=36 Identities=17% Similarity=0.149 Sum_probs=26.0
Q ss_pred CCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCCC
Q 040291 3 RPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDY 41 (160)
Q Consensus 3 ~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~ 41 (160)
+.+.++++..+.| -=..++++|+++|++|.++....
T Consensus 6 ~~k~vlITGas~g---IG~~~a~~l~~~G~~v~~~~~~~ 41 (255)
T 3icc_A 6 KGKVALVTGASRG---IGRAIAKRLANDGALVAIHYGNR 41 (255)
T ss_dssp TTCEEEETTCSSH---HHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCCEEEEECCCCh---HHHHHHHHHHHCCCeEEEEeCCc
Confidence 4567778766554 23678999999999998865443
No 215
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=52.80 E-value=15 Score=26.33 Aligned_cols=36 Identities=14% Similarity=0.197 Sum_probs=24.3
Q ss_pred CC-CCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCC
Q 040291 1 MN-RPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTD 40 (160)
Q Consensus 1 m~-~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~ 40 (160)
|. +++|+++ ++.|.+- ..++++|.++|++|+.++-.
T Consensus 1 M~~~~~ilVt--GatG~iG--~~l~~~L~~~g~~V~~~~R~ 37 (313)
T 1qyd_A 1 MDKKSRVLIV--GGTGYIG--KRIVNASISLGHPTYVLFRP 37 (313)
T ss_dssp -CCCCCEEEE--STTSTTH--HHHHHHHHHTTCCEEEECCS
T ss_pred CCCCCEEEEE--cCCcHHH--HHHHHHHHhCCCcEEEEECC
Confidence 54 4566655 3445442 46789999999999987654
No 216
>3ty2_A 5'-nucleotidase SURE; surviVal protein, phosphatase, hydrolase; HET: MSE; 1.89A {Coxiella burnetii} SCOP: c.106.1.0
Probab=52.72 E-value=29 Score=25.18 Aligned_cols=41 Identities=17% Similarity=0.065 Sum_probs=29.0
Q ss_pred CCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCCCChhh
Q 040291 3 RPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKR 45 (160)
Q Consensus 3 ~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~~~~~ 45 (160)
++||++.-==|. +--=+..|.++|.+ +|+|+++.+...+..
T Consensus 11 ~m~ILlTNDDGi-~apGi~aL~~~l~~-~~~V~VVAP~~~~Sg 51 (261)
T 3ty2_A 11 KLRLLLSNDDGV-YAKGLAILAKTLAD-LGEVDVVAPDRNRSG 51 (261)
T ss_dssp CCEEEEECSSCT-TCHHHHHHHHHHTT-TSEEEEEEESSCCTT
T ss_pred CCeEEEEcCCCC-CCHHHHHHHHHHHh-cCCEEEEecCCCCcC
Confidence 477887763333 33446778888877 899999999876643
No 217
>3crn_A Response regulator receiver domain protein, CHEY-; structural genomics, signal regulator receiver domain; HET: PHD; 1.58A {Methanospirillum hungatei jf-1}
Probab=52.71 E-value=29 Score=21.05 Aligned_cols=32 Identities=9% Similarity=-0.004 Sum_probs=20.4
Q ss_pred CCccEEEecCCCcc--HHHHHHHh-----CCccEEEccc
Q 040291 106 EKLDCFIADGYMAW--SMEVAKKM-----NVRGALFWPS 137 (160)
Q Consensus 106 ~~~d~vI~D~~~~~--~~~~A~~l-----giP~i~~~~~ 137 (160)
.+||+||.|...+. +..+.+++ ++|.+.+...
T Consensus 46 ~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~ 84 (132)
T 3crn_A 46 EFFNLALFXIKLPDMEGTELLEKAHKLRPGMKKIMVTGY 84 (132)
T ss_dssp SCCSEEEECSBCSSSBHHHHHHHHHHHCTTSEEEEEESC
T ss_pred CCCCEEEEecCCCCCchHHHHHHHHhhCCCCcEEEEecc
Confidence 47899999986642 44444332 5777776554
No 218
>3gi1_A LBP, laminin-binding protein of group A streptococci; zinc-binding receptor, metal-binding, helical backbone, alpha/beta domains; 2.45A {Streptococcus pyogenes} PDB: 3hjt_A
Probab=52.60 E-value=27 Score=25.40 Aligned_cols=42 Identities=14% Similarity=0.224 Sum_probs=32.4
Q ss_pred HHHHHHHHHhcCCCCCccEEEecCCCcc--HHHHHHHhCCccEEEcc
Q 040291 92 KLEELIEDINSREDEKLDCFIADGYMAW--SMEVAKKMNVRGALFWP 136 (160)
Q Consensus 92 ~~~~ll~~l~~~~~~~~d~vI~D~~~~~--~~~~A~~lgiP~i~~~~ 136 (160)
.+.++.+.+++ .+..||+++..... +..+|++.|++.+.+.+
T Consensus 216 ~l~~l~~~ik~---~~v~~if~e~~~~~~~~~~la~~~g~~v~~l~p 259 (286)
T 3gi1_A 216 QLKEIQDFVKE---YNVKTIFAEDNVNPKIAHAIAKSTGAKVKTLSP 259 (286)
T ss_dssp HHHHHHHHHHH---TTCCEEEECTTSCTHHHHHHHHTTTCEEEECCC
T ss_pred HHHHHHHHHHH---cCCCEEEEeCCCChHHHHHHHHHhCCeEEEecc
Confidence 46666666665 68999999997754 45689999999988754
No 219
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=52.58 E-value=14 Score=26.99 Aligned_cols=33 Identities=33% Similarity=0.332 Sum_probs=24.9
Q ss_pred CCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCC
Q 040291 3 RPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTD 40 (160)
Q Consensus 3 ~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~ 40 (160)
.++|.++-.+..| ..+++.|+++||+|+++...
T Consensus 21 m~~I~iIG~G~mG-----~~~A~~l~~~G~~V~~~dr~ 53 (310)
T 3doj_A 21 MMEVGFLGLGIMG-----KAMSMNLLKNGFKVTVWNRT 53 (310)
T ss_dssp SCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSS
T ss_pred CCEEEEECccHHH-----HHHHHHHHHCCCeEEEEeCC
Confidence 4678888655444 56899999999999987554
No 220
>2qzj_A Two-component response regulator; 11017X, PSI-II, structural genomics; 2.89A {Clostridium difficile}
Probab=52.41 E-value=22 Score=21.90 Aligned_cols=32 Identities=13% Similarity=0.036 Sum_probs=20.6
Q ss_pred CCccEEEecCCCcc--HHHHHHHh----CCccEEEccc
Q 040291 106 EKLDCFIADGYMAW--SMEVAKKM----NVRGALFWPS 137 (160)
Q Consensus 106 ~~~d~vI~D~~~~~--~~~~A~~l----giP~i~~~~~ 137 (160)
.+||+||.|...+. +..+.+++ .+|.+.+...
T Consensus 47 ~~~dlvllD~~l~~~~g~~l~~~l~~~~~~~ii~ls~~ 84 (136)
T 2qzj_A 47 NKYDLIFLEIILSDGDGWTLCKKIRNVTTCPIVYMTYI 84 (136)
T ss_dssp CCCSEEEEESEETTEEHHHHHHHHHTTCCCCEEEEESC
T ss_pred cCCCEEEEeCCCCCCCHHHHHHHHccCCCCCEEEEEcC
Confidence 47899999986542 44444443 5787776543
No 221
>3pfb_A Cinnamoyl esterase; alpha/beta hydrolase fold, hydrolase, cinnamoyl/Fe esterase, hydroxycinammates, extracellular; HET: ZYC; 1.58A {Lactobacillus johnsonii} PDB: 3pf9_A* 3pfc_A* 3s2z_A* 3pf8_A 3qm1_A*
Probab=52.41 E-value=29 Score=23.64 Aligned_cols=35 Identities=9% Similarity=0.067 Sum_probs=26.2
Q ss_pred EEEEcCCCCCC--hHHHHHHHHHHHhCCCEEEEEeCC
Q 040291 6 VLVLPIPAQGH--VIPLLEFSQCLAKQGFRVTFVNTD 40 (160)
Q Consensus 6 i~~~~~p~~GH--~~P~l~la~~L~~rGh~Vt~~~~~ 40 (160)
++++-.+..|+ ..-+..+++.|+++|+.|..+--.
T Consensus 48 ~vv~~HG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~ 84 (270)
T 3pfb_A 48 MAIIFHGFTANRNTSLLREIANSLRDENIASVRFDFN 84 (270)
T ss_dssp EEEEECCTTCCTTCHHHHHHHHHHHHTTCEEEEECCT
T ss_pred EEEEEcCCCCCccccHHHHHHHHHHhCCcEEEEEccc
Confidence 45555556655 667889999999999999887544
No 222
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=52.35 E-value=6.1 Score=29.63 Aligned_cols=31 Identities=19% Similarity=0.199 Sum_probs=24.5
Q ss_pred eEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCC
Q 040291 5 HVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTD 40 (160)
Q Consensus 5 ~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~ 40 (160)
+|+++-.+..| ..+|+.|+++||+|+++...
T Consensus 17 kI~iIG~G~mG-----~~la~~L~~~G~~V~~~~r~ 47 (366)
T 1evy_A 17 KAVVFGSGAFG-----TALAMVLSKKCREVCVWHMN 47 (366)
T ss_dssp EEEEECCSHHH-----HHHHHHHTTTEEEEEEECSC
T ss_pred eEEEECCCHHH-----HHHHHHHHhCCCEEEEEECC
Confidence 78888766666 45789999999999998654
No 223
>1xrs_B D-lysine 5,6-aminomutase beta subunit; TIM barrel, rossmann domain, PLP, cobalamin, 5'-deoxyad radical, adenosylcobalamin; HET: B12 PLP 5AD; 2.80A {Clostridium sticklandii} SCOP: c.23.6.1 d.230.4.1
Probab=52.34 E-value=13 Score=27.04 Aligned_cols=44 Identities=7% Similarity=0.065 Sum_probs=36.4
Q ss_pred CCeEEEEcCCCCCChHHHHHHHHH--------HHhC-CCEEEEEeCCCChhhH
Q 040291 3 RPHVLVLPIPAQGHVIPLLEFSQC--------LAKQ-GFRVTFVNTDYDHKRI 46 (160)
Q Consensus 3 ~~~i~~~~~p~~GH~~P~l~la~~--------L~~r-Gh~Vt~~~~~~~~~~~ 46 (160)
+.+|++.+.++-.|-....-++.. |.++ |++|..+...-..+.+
T Consensus 120 ~~~Vvlatv~gD~HdiG~~iv~~~k~~~~~~~L~~~~G~eVi~LG~~vp~e~i 172 (262)
T 1xrs_B 120 KIVVVGASTGTDAHTVGIDAIMNMKGYAGHYGLERYEMIDAYNLGSQVANEDF 172 (262)
T ss_dssp CEEEEEEEBTTCCCCHHHHHHHSTTCBTTBCCGGGCTTEEEEECCSSBCHHHH
T ss_pred CCEEEEEeCCCCCchHHHHHHhhhhcccchHHHHhcCCcEEEECCCCCCHHHH
Confidence 468999999999999999888877 9999 9999998876554443
No 224
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=52.31 E-value=12 Score=29.23 Aligned_cols=32 Identities=31% Similarity=0.462 Sum_probs=24.7
Q ss_pred CeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCC
Q 040291 4 PHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTD 40 (160)
Q Consensus 4 ~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~ 40 (160)
++|.++-.+..| ..+|..|+++||+|+++...
T Consensus 3 mkI~VIG~G~vG-----~~lA~~La~~G~~V~~~D~~ 34 (450)
T 3gg2_A 3 LDIAVVGIGYVG-----LVSATCFAELGANVRCIDTD 34 (450)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSC
T ss_pred CEEEEECcCHHH-----HHHHHHHHhcCCEEEEEECC
Confidence 688888554444 46899999999999987654
No 225
>2xzm_B RPS0E; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_B
Probab=52.31 E-value=8.9 Score=27.52 Aligned_cols=31 Identities=16% Similarity=0.127 Sum_probs=23.0
Q ss_pred CCccEEE-ecCCCc-cHHHHHHHhCCccEEEcc
Q 040291 106 EKLDCFI-ADGYMA-WSMEVAKKMNVRGALFWP 136 (160)
Q Consensus 106 ~~~d~vI-~D~~~~-~~~~~A~~lgiP~i~~~~ 136 (160)
..||+|| .|+-.- -+..=|.++|||.|.+.-
T Consensus 113 ~~PdlliV~Dp~~e~~ai~EA~~l~IPvIalvD 145 (241)
T 2xzm_B 113 EEPRVLIVTDPRSDFQAIKEASYVNIPVIALCD 145 (241)
T ss_dssp CCCSEEEESCTTTTHHHHHHHTTTTCCEEECCC
T ss_pred CCCCEEEEECCCcchHHHHHHHHhCCCEEEEec
Confidence 3578765 887653 356679999999999753
No 226
>4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A*
Probab=52.28 E-value=14 Score=27.63 Aligned_cols=25 Identities=16% Similarity=0.154 Sum_probs=22.1
Q ss_pred hHHHHHHHHHHHhCCCEEEEEeCCC
Q 040291 17 VIPLLEFSQCLAKQGFRVTFVNTDY 41 (160)
Q Consensus 17 ~~P~l~la~~L~~rGh~Vt~~~~~~ 41 (160)
+-++.+|.+.|.++|++|.+|+...
T Consensus 145 ~~~~~~l~~~l~~~G~~v~ivSas~ 169 (327)
T 4as2_A 145 FSGQRELYNKLMENGIEVYVISAAH 169 (327)
T ss_dssp CHHHHHHHHHHHHTTCEEEEEEEEE
T ss_pred CHHHHHHHHHHHHCCCEEEEEeCCc
Confidence 4679999999999999999988754
No 227
>3qua_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.10A {Mycobacterium smegmatis str}
Probab=52.21 E-value=34 Score=23.64 Aligned_cols=33 Identities=15% Similarity=0.105 Sum_probs=23.7
Q ss_pred CCeEEEEcCCCCCC----hHHHHHHHHHHHhCCCEEEE
Q 040291 3 RPHVLVLPIPAQGH----VIPLLEFSQCLAKQGFRVTF 36 (160)
Q Consensus 3 ~~~i~~~~~p~~GH----~~P~l~la~~L~~rGh~Vt~ 36 (160)
+++|.++.... +. ..-..+|++.|+++|+.|..
T Consensus 22 ~~~v~Vfggs~-~~~~~~~~~A~~lg~~La~~g~~lV~ 58 (199)
T 3qua_A 22 QWAVCVYCASG-PTHPELLELAAEVGSSIAARGWTLVS 58 (199)
T ss_dssp CCEEEEECCSS-CCCHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred CCEEEEEECCC-CCCHHHHHHHHHHHHHHHHCCCEEEE
Confidence 36788887555 43 34557888999999987644
No 228
>2pl1_A Transcriptional regulatory protein PHOP; CHEY-like fold, response regulator, beryllium fluoride, transcription factor, activated, virulence; 1.90A {Escherichia coli} SCOP: c.23.1.1 PDB: 2pkx_A
Probab=52.14 E-value=34 Score=20.11 Aligned_cols=32 Identities=9% Similarity=0.012 Sum_probs=20.7
Q ss_pred CCccEEEecCCCcc--HHHHHHHh-----CCccEEEccc
Q 040291 106 EKLDCFIADGYMAW--SMEVAKKM-----NVRGALFWPS 137 (160)
Q Consensus 106 ~~~d~vI~D~~~~~--~~~~A~~l-----giP~i~~~~~ 137 (160)
.+||++|.|...+. +..+.+++ ++|++.+...
T Consensus 43 ~~~dlil~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~ 81 (121)
T 2pl1_A 43 HIPDIAIVDLGLPDEDGLSLIRRWRSNDVSLPILVLTAR 81 (121)
T ss_dssp SCCSEEEECSCCSSSCHHHHHHHHHHTTCCSCEEEEESC
T ss_pred cCCCEEEEecCCCCCCHHHHHHHHHhcCCCCCEEEEecC
Confidence 47899999986643 44444332 5788777554
No 229
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=52.07 E-value=16 Score=26.14 Aligned_cols=36 Identities=17% Similarity=0.283 Sum_probs=23.7
Q ss_pred CC-CCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCC
Q 040291 1 MN-RPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTD 40 (160)
Q Consensus 1 m~-~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~ 40 (160)
|. +++|+++- +.|.+- ..++++|.++||+|+.++-.
T Consensus 1 M~~~~~ilVtG--atG~iG--~~l~~~L~~~g~~V~~l~R~ 37 (308)
T 1qyc_A 1 MGSRSRILLIG--ATGYIG--RHVAKASLDLGHPTFLLVRE 37 (308)
T ss_dssp -CCCCCEEEES--TTSTTH--HHHHHHHHHTTCCEEEECCC
T ss_pred CCCCCEEEEEc--CCcHHH--HHHHHHHHhCCCCEEEEECC
Confidence 65 45665553 444442 46789999999999987654
No 230
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=51.93 E-value=13 Score=25.12 Aligned_cols=32 Identities=16% Similarity=0.198 Sum_probs=22.4
Q ss_pred eEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCC
Q 040291 5 HVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTD 40 (160)
Q Consensus 5 ~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~ 40 (160)
+|+++ ++.|.+- ..++++|+++|++|+.+.-.
T Consensus 2 kvlVt--GatG~iG--~~l~~~L~~~g~~V~~~~R~ 33 (221)
T 3ew7_A 2 KIGII--GATGRAG--SRILEEAKNRGHEVTAIVRN 33 (221)
T ss_dssp EEEEE--TTTSHHH--HHHHHHHHHTTCEEEEEESC
T ss_pred eEEEE--cCCchhH--HHHHHHHHhCCCEEEEEEcC
Confidence 44444 3444443 57899999999999988754
No 231
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=51.86 E-value=10 Score=28.17 Aligned_cols=35 Identities=23% Similarity=0.357 Sum_probs=25.1
Q ss_pred CCCCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCC
Q 040291 1 MNRPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTD 40 (160)
Q Consensus 1 m~~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~ 40 (160)
|+..+|.++-.+..| ..+|..|+++||+|+++...
T Consensus 4 ~~~~kI~vIGaG~MG-----~~iA~~la~~G~~V~l~d~~ 38 (319)
T 2dpo_A 4 PAAGDVLIVGSGLVG-----RSWAMLFASGGFRVKLYDIE 38 (319)
T ss_dssp ---CEEEEECCSHHH-----HHHHHHHHHTTCCEEEECSC
T ss_pred CCCceEEEEeeCHHH-----HHHHHHHHHCCCEEEEEeCC
Confidence 344678888666555 46788999999999998654
No 232
>3c6x_A Hydroxynitrilase; atomic resolution, hydroxynitril lyase, catalysis, protonation state, AB initio calculations, substrate bindin; 1.05A {Hevea brasiliensis} SCOP: c.69.1.20 PDB: 1sc9_A 1yas_A* 2g4l_A* 2yas_A 1qj4_A 3c6y_A 3c6z_A 3c70_A 3yas_A 4yas_A 5yas_A* 6yas_A 7yas_A* 1yb6_A* 1yb7_A 1sck_A 1sci_A 1scq_A 1dwo_A 1dwp_A ...
Probab=51.80 E-value=18 Score=25.12 Aligned_cols=39 Identities=18% Similarity=0.239 Sum_probs=27.1
Q ss_pred CCCCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCC
Q 040291 1 MNRPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTD 40 (160)
Q Consensus 1 m~~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~ 40 (160)
|.+..|+++-..+.+.. -+..++..|+++||+|..+--.
T Consensus 1 ~~~~~vvllHG~~~~~~-~w~~~~~~L~~~g~~via~Dl~ 39 (257)
T 3c6x_A 1 MAFAHFVLIHTICHGAW-IWHKLKPLLEALGHKVTALDLA 39 (257)
T ss_dssp -CCCEEEEECCTTCCGG-GGTTHHHHHHHTTCEEEEECCT
T ss_pred CCCCcEEEEcCCccCcC-CHHHHHHHHHhCCCEEEEeCCC
Confidence 67777888875544433 3567889999999999876443
No 233
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=51.70 E-value=12 Score=29.08 Aligned_cols=36 Identities=22% Similarity=0.251 Sum_probs=24.0
Q ss_pred CCCCeEEEEcCCCCCChHHHHHHHHHHHhC--CCEEEEEeCCC
Q 040291 1 MNRPHVLVLPIPAQGHVIPLLEFSQCLAKQ--GFRVTFVNTDY 41 (160)
Q Consensus 1 m~~~~i~~~~~p~~GH~~P~l~la~~L~~r--Gh~Vt~~~~~~ 41 (160)
|++++|+++-.+..| +..|..|+++ |++||++-...
T Consensus 1 M~~~~VvIIGaG~aG-----l~aA~~L~~~~~g~~Vtvie~~~ 38 (472)
T 3iwa_A 1 MSLKHVVVIGAVALG-----PKAACRFKRLDPEAHVTMIDQAS 38 (472)
T ss_dssp ---CEEEEECCSSHH-----HHHHHHHHHHCTTSEEEEECCC-
T ss_pred CCCCcEEEECCCHHH-----HHHHHHHHhhCcCCCEEEEECCC
Confidence 777888888755555 4566777777 99999986554
No 234
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=51.67 E-value=7.1 Score=28.44 Aligned_cols=35 Identities=20% Similarity=0.353 Sum_probs=26.1
Q ss_pred CCCCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCC
Q 040291 1 MNRPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTD 40 (160)
Q Consensus 1 m~~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~ 40 (160)
|++.+|+++-.+..| +..|..|+++|++|+++-..
T Consensus 1 m~~~~vvIIG~G~aG-----l~~A~~l~~~g~~v~vie~~ 35 (357)
T 4a9w_A 1 MDSVDVVVIGGGQSG-----LSAGYFLRRSGLSYVILDAE 35 (357)
T ss_dssp CEEEEEEEECCSHHH-----HHHHHHHHHSSCCEEEECCS
T ss_pred CCcCCEEEECcCHHH-----HHHHHHHHHCCCCEEEEECC
Confidence 556677777655444 56788899999999998654
No 235
>1tvm_A PTS system, galactitol-specific IIB component; phosphotransferase system (PTS), P-loop; NMR {Escherichia coli}
Probab=51.52 E-value=25 Score=21.67 Aligned_cols=36 Identities=11% Similarity=0.106 Sum_probs=29.3
Q ss_pred CCeEEEEcCCCCCChH-HHHHHHHHHHhCCCEEEEEe
Q 040291 3 RPHVLVLPIPAQGHVI-PLLEFSQCLAKQGFRVTFVN 38 (160)
Q Consensus 3 ~~~i~~~~~p~~GH~~-P~l~la~~L~~rGh~Vt~~~ 38 (160)
+.+|++++..|.|.-. -...+-+.+.++|.++.+-.
T Consensus 21 ~kkIlvvC~sG~gTS~ll~~kl~~~~~~~gi~~~V~~ 57 (113)
T 1tvm_A 21 KRKIIVACGGAVATSTMAAEEIKELCQSHNIPVELIQ 57 (113)
T ss_dssp SEEEEEESCSCSSHHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred ccEEEEECCCCHHHHHHHHHHHHHHHHHcCCeEEEEE
Confidence 3579999999999987 46788888889999876544
No 236
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=51.48 E-value=15 Score=27.69 Aligned_cols=33 Identities=18% Similarity=0.214 Sum_probs=24.9
Q ss_pred CCCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeC
Q 040291 2 NRPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNT 39 (160)
Q Consensus 2 ~~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~ 39 (160)
...+|+|+-.+-.| +.+|..|+++|++|+++--
T Consensus 4 ~~~~V~IVGaG~aG-----l~~A~~L~~~G~~v~v~E~ 36 (397)
T 2vou_A 4 TTDRIAVVGGSISG-----LTAALMLRDAGVDVDVYER 36 (397)
T ss_dssp CCSEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred CCCcEEEECCCHHH-----HHHHHHHHhCCCCEEEEec
Confidence 45678887655444 6788899999999999853
No 237
>3qit_A CURM TE, polyketide synthase; thioesterase, alpha/beta hydrolase, decarboxylase, sulfate elimination, terminal alkene production; 1.68A {Lyngbya majuscula 19L}
Probab=51.46 E-value=24 Score=23.96 Aligned_cols=35 Identities=23% Similarity=0.150 Sum_probs=26.5
Q ss_pred EEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCC
Q 040291 6 VLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTD 40 (160)
Q Consensus 6 i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~ 40 (160)
.+++-.+..|+..-+..+++.|+++|++|..+--.
T Consensus 28 ~vv~~hG~~~~~~~~~~~~~~l~~~G~~v~~~d~~ 62 (286)
T 3qit_A 28 VVLCIHGILEQGLAWQEVALPLAAQGYRVVAPDLF 62 (286)
T ss_dssp EEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCT
T ss_pred EEEEECCCCcccchHHHHHHHhhhcCeEEEEECCC
Confidence 44444566677777889999999999999887543
No 238
>1mio_B Nitrogenase molybdenum iron protein (beta chain); HET: HCA CFM CLP; 3.00A {Clostridium pasteurianum} SCOP: c.92.2.3
Probab=51.41 E-value=21 Score=27.85 Aligned_cols=26 Identities=23% Similarity=0.360 Sum_probs=21.5
Q ss_pred CCccEEEecCCCccHHHHHHHhCCccEEE
Q 040291 106 EKLDCFIADGYMAWSMEVAKKMNVRGALF 134 (160)
Q Consensus 106 ~~~d~vI~D~~~~~~~~~A~~lgiP~i~~ 134 (160)
.++|++|.+. ....+|+++|||++.+
T Consensus 384 ~~pDl~ig~~---~~~~~a~k~gip~~~~ 409 (458)
T 1mio_B 384 EGVDLLISNT---YGKFIAREENIPFVRF 409 (458)
T ss_dssp SCCSEEEESG---GGHHHHHHHTCCEEEC
T ss_pred cCCCEEEeCc---chHHHHHHcCCCEEEe
Confidence 4799999775 4678999999999965
No 239
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=51.36 E-value=13 Score=25.63 Aligned_cols=35 Identities=23% Similarity=0.199 Sum_probs=23.7
Q ss_pred CCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCCC
Q 040291 3 RPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDY 41 (160)
Q Consensus 3 ~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~ 41 (160)
.++|+++ ++.|-+- ..++++|+++||+|+.+.-..
T Consensus 21 ~~~ilVt--GatG~iG--~~l~~~L~~~G~~V~~~~R~~ 55 (236)
T 3e8x_A 21 GMRVLVV--GANGKVA--RYLLSELKNKGHEPVAMVRNE 55 (236)
T ss_dssp CCEEEEE--TTTSHHH--HHHHHHHHHTTCEEEEEESSG
T ss_pred CCeEEEE--CCCChHH--HHHHHHHHhCCCeEEEEECCh
Confidence 4555544 3444332 478899999999999987543
No 240
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=51.20 E-value=9.6 Score=27.95 Aligned_cols=33 Identities=15% Similarity=0.017 Sum_probs=25.8
Q ss_pred CCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCCC
Q 040291 3 RPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDY 41 (160)
Q Consensus 3 ~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~ 41 (160)
+++|+++-.++.|- .++..|+ +||+|+++....
T Consensus 2 ~mkI~IiGaGa~G~-----~~a~~L~-~g~~V~~~~r~~ 34 (307)
T 3ego_A 2 SLKIGIIGGGSVGL-----LCAYYLS-LYHDVTVVTRRQ 34 (307)
T ss_dssp CCEEEEECCSHHHH-----HHHHHHH-TTSEEEEECSCH
T ss_pred CCEEEEECCCHHHH-----HHHHHHh-cCCceEEEECCH
Confidence 47899987666664 5688899 999999987654
No 241
>1imj_A CIB, CCG1-interacting factor B; alpha/beta hydrolase, CCG1 interactor; 2.20A {Homo sapiens} SCOP: c.69.1.23
Probab=51.14 E-value=41 Score=21.89 Aligned_cols=38 Identities=13% Similarity=0.025 Sum_probs=28.2
Q ss_pred eEEEEcCCCCCChHHHHH--HHHHHHhCCCEEEEEeCCCC
Q 040291 5 HVLVLPIPAQGHVIPLLE--FSQCLAKQGFRVTFVNTDYD 42 (160)
Q Consensus 5 ~i~~~~~p~~GH~~P~l~--la~~L~~rGh~Vt~~~~~~~ 42 (160)
..+++-.+..|+...+.. +++.|+++|+.|..+-....
T Consensus 33 ~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~ 72 (210)
T 1imj_A 33 FSVLLLHGIRFSSETWQNLGTLHRLAQAGYRAVAIDLPGL 72 (210)
T ss_dssp CEEEECCCTTCCHHHHHHHTHHHHHHHTTCEEEEECCTTS
T ss_pred ceEEEECCCCCccceeecchhHHHHHHCCCeEEEecCCCC
Confidence 355556677788888888 59999999999887655433
No 242
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=51.11 E-value=16 Score=25.10 Aligned_cols=32 Identities=13% Similarity=0.226 Sum_probs=23.1
Q ss_pred CCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeC
Q 040291 3 RPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNT 39 (160)
Q Consensus 3 ~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~ 39 (160)
.++|.++-.+..| ..+++.|+++||+|+++..
T Consensus 19 ~~~I~iiG~G~mG-----~~la~~l~~~g~~V~~~~~ 50 (209)
T 2raf_A 19 GMEITIFGKGNMG-----QAIGHNFEIAGHEVTYYGS 50 (209)
T ss_dssp -CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECT
T ss_pred CCEEEEECCCHHH-----HHHHHHHHHCCCEEEEEcC
Confidence 3567777644444 5678999999999998754
No 243
>3rqi_A Response regulator protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PHD CIT; 1.70A {Burkholderia pseudomallei}
Probab=51.09 E-value=18 Score=23.82 Aligned_cols=42 Identities=10% Similarity=0.104 Sum_probs=25.8
Q ss_pred HHHHHHHHhcCCCCCccEEEecCCCcc--HHHHHHHh-----CCccEEEccc
Q 040291 93 LEELIEDINSREDEKLDCFIADGYMAW--SMEVAKKM-----NVRGALFWPS 137 (160)
Q Consensus 93 ~~~ll~~l~~~~~~~~d~vI~D~~~~~--~~~~A~~l-----giP~i~~~~~ 137 (160)
.++.++.+.. .+||+||.|...+. +..+++++ ++|.+.+...
T Consensus 40 ~~~al~~~~~---~~~dlvl~D~~lp~~~g~~~~~~l~~~~~~~~ii~lt~~ 88 (184)
T 3rqi_A 40 KDEALKLAGA---EKFEFITVXLHLGNDSGLSLIAPLCDLQPDARILVLTGY 88 (184)
T ss_dssp HHHHHHHHTT---SCCSEEEECSEETTEESHHHHHHHHHHCTTCEEEEEESS
T ss_pred HHHHHHHHhh---CCCCEEEEeccCCCccHHHHHHHHHhcCCCCCEEEEeCC
Confidence 3445555543 57999999987653 44444332 5787776554
No 244
>3f5d_A Protein YDEA; unknow protein, PSI-II, nysgrc, structural genomics, protein structure initiative; 2.06A {Bacillus subtilis}
Probab=51.01 E-value=21 Score=24.54 Aligned_cols=41 Identities=17% Similarity=0.122 Sum_probs=29.9
Q ss_pred CCCCeEEEEcCCCCCChHHHHHHHHHHHhC-CCEEEEEeCCCC
Q 040291 1 MNRPHVLVLPIPAQGHVIPLLEFSQCLAKQ-GFRVTFVNTDYD 42 (160)
Q Consensus 1 m~~~~i~~~~~p~~GH~~P~l~la~~L~~r-Gh~Vt~~~~~~~ 42 (160)
|...+|+++-+++..-+- +...+..|.++ |++|++++....
T Consensus 1 M~m~kV~ill~~g~~~~E-~~~~~~~l~~~~~~~v~~vs~~~~ 42 (206)
T 3f5d_A 1 MSLKKALFLILDQYADWE-GVYLASALNQREDWSVHTVSLDPI 42 (206)
T ss_dssp --CEEEEEECCSSBCTTT-SHHHHHHHHTSTTEEEEEEESSSE
T ss_pred CCccEEEEEEcCCCcHHH-HHHHHHHHhccCCeEEEEEECCCC
Confidence 666789999988887654 33556677777 999999998753
No 245
>3pdi_A Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=51.00 E-value=16 Score=28.88 Aligned_cols=27 Identities=26% Similarity=0.014 Sum_probs=22.0
Q ss_pred CCccEEEecCCCccHHHHHHHhCCccEEEc
Q 040291 106 EKLDCFIADGYMAWSMEVAKKMNVRGALFW 135 (160)
Q Consensus 106 ~~~d~vI~D~~~~~~~~~A~~lgiP~i~~~ 135 (160)
.+||++|.. .....+|+++|||++.+.
T Consensus 400 ~~pDL~ig~---~~~~~~a~k~gIP~~~~~ 426 (483)
T 3pdi_A 400 YQADILIAG---GRNMYTALKGRVPFLDIN 426 (483)
T ss_dssp TTCSEEECC---GGGHHHHHHTTCCBCCCC
T ss_pred cCCCEEEEC---CchhHHHHHcCCCEEEec
Confidence 589999975 456789999999998653
No 246
>2wtm_A EST1E; hydrolase; 1.60A {Clostridium proteoclasticum} PDB: 2wtn_A*
Probab=50.96 E-value=32 Score=23.45 Aligned_cols=33 Identities=12% Similarity=0.181 Sum_probs=25.8
Q ss_pred EEEEcCCCCCC--hHHHHHHHHHHHhCCCEEEEEe
Q 040291 6 VLVLPIPAQGH--VIPLLEFSQCLAKQGFRVTFVN 38 (160)
Q Consensus 6 i~~~~~p~~GH--~~P~l~la~~L~~rGh~Vt~~~ 38 (160)
.+++-.+..|+ ..-+..+++.|+++|++|..+-
T Consensus 29 ~vvl~HG~~~~~~~~~~~~~~~~l~~~g~~vi~~D 63 (251)
T 2wtm_A 29 LCIIIHGFTGHSEERHIVAVQETLNEIGVATLRAD 63 (251)
T ss_dssp EEEEECCTTCCTTSHHHHHHHHHHHHTTCEEEEEC
T ss_pred EEEEEcCCCcccccccHHHHHHHHHHCCCEEEEec
Confidence 45555677777 6778899999999999987754
No 247
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=50.88 E-value=11 Score=24.94 Aligned_cols=34 Identities=18% Similarity=0.132 Sum_probs=23.9
Q ss_pred CCeEEEEcCCCCCChHHHHHHHHHHHhC-CCEEEEEeCCC
Q 040291 3 RPHVLVLPIPAQGHVIPLLEFSQCLAKQ-GFRVTFVNTDY 41 (160)
Q Consensus 3 ~~~i~~~~~p~~GH~~P~l~la~~L~~r-Gh~Vt~~~~~~ 41 (160)
+.||+++-. |.+ =..+++.|.++ |++|+++....
T Consensus 39 ~~~v~IiG~---G~~--G~~~a~~L~~~~g~~V~vid~~~ 73 (183)
T 3c85_A 39 HAQVLILGM---GRI--GTGAYDELRARYGKISLGIEIRE 73 (183)
T ss_dssp TCSEEEECC---SHH--HHHHHHHHHHHHCSCEEEEESCH
T ss_pred CCcEEEECC---CHH--HHHHHHHHHhccCCeEEEEECCH
Confidence 457887743 332 24678899999 99999987643
No 248
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=50.84 E-value=10 Score=27.74 Aligned_cols=33 Identities=21% Similarity=0.317 Sum_probs=25.0
Q ss_pred CCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCC
Q 040291 3 RPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTD 40 (160)
Q Consensus 3 ~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~ 40 (160)
..+|+|+-.+..| +..|.+|+++|++|+++--.
T Consensus 4 ~~dvvIIG~G~~G-----l~~A~~La~~G~~V~vlE~~ 36 (369)
T 3dme_A 4 DIDCIVIGAGVVG-----LAIARALAAGGHEVLVAEAA 36 (369)
T ss_dssp CEEEEEECCSHHH-----HHHHHHHHHTTCCEEEECSS
T ss_pred cCCEEEECCCHHH-----HHHHHHHHhCCCeEEEEeCC
Confidence 3567777665555 67888999999999998544
No 249
>2l2q_A PTS system, cellobiose-specific IIB component (CE; cellobiose-specific phosphotransferase IIB component, struct genomics; NMR {Borrelia burgdorferi}
Probab=50.82 E-value=20 Score=21.95 Aligned_cols=35 Identities=6% Similarity=0.068 Sum_probs=28.5
Q ss_pred CeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEe
Q 040291 4 PHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVN 38 (160)
Q Consensus 4 ~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~ 38 (160)
++|++++..|.|+-.-.-.+-+.+.++|.++.+-.
T Consensus 5 mkIlvvC~~G~~TSll~~kl~~~~~~~gi~~~i~~ 39 (109)
T 2l2q_A 5 MNILLVCGAGMSTSMLVQRIEKYAKSKNINATIEA 39 (109)
T ss_dssp EEEEEESSSSCSSCHHHHHHHHHHHHHTCSEEEEE
T ss_pred eEEEEECCChHhHHHHHHHHHHHHHHCCCCeEEEE
Confidence 57999999999999777777788888998776533
No 250
>1mb3_A Cell division response regulator DIVK; signal transduction protein, structural proteomics in europe, spine, structural genomics; 1.41A {Caulobacter vibrioides} SCOP: c.23.1.1 PDB: 1m5u_A 1mav_A 1mb0_A 1m5t_A
Probab=50.69 E-value=24 Score=20.98 Aligned_cols=32 Identities=19% Similarity=0.125 Sum_probs=19.3
Q ss_pred CCccEEEecCCCcc--HHHHHHHh-------CCccEEEccc
Q 040291 106 EKLDCFIADGYMAW--SMEVAKKM-------NVRGALFWPS 137 (160)
Q Consensus 106 ~~~d~vI~D~~~~~--~~~~A~~l-------giP~i~~~~~ 137 (160)
.+||+||.|...+. +..+.+++ ++|.+.+...
T Consensus 44 ~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~ 84 (124)
T 1mb3_A 44 NKPDLILMDIQLPEISGLEVTKWLKEDDDLAHIPVVAVTAF 84 (124)
T ss_dssp HCCSEEEEESBCSSSBHHHHHHHHHHSTTTTTSCEEEEC--
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHcCccccCCcEEEEECC
Confidence 36899999986643 44444332 4677776543
No 251
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=50.52 E-value=24 Score=25.90 Aligned_cols=37 Identities=11% Similarity=-0.015 Sum_probs=24.3
Q ss_pred CCCCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCCC
Q 040291 1 MNRPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDY 41 (160)
Q Consensus 1 m~~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~ 41 (160)
|.+++|+++ ++.|.+- ..++++|.++||+|+.++-..
T Consensus 8 M~~~~IlVt--GatG~iG--~~l~~~L~~~g~~V~~l~R~~ 44 (346)
T 3i6i_A 8 SPKGRVLIA--GATGFIG--QFVATASLDAHRPTYILARPG 44 (346)
T ss_dssp ---CCEEEE--CTTSHHH--HHHHHHHHHTTCCEEEEECSS
T ss_pred CCCCeEEEE--CCCcHHH--HHHHHHHHHCCCCEEEEECCC
Confidence 445566665 4445433 568899999999999987654
No 252
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=50.38 E-value=16 Score=25.67 Aligned_cols=33 Identities=27% Similarity=0.295 Sum_probs=24.4
Q ss_pred CCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCC
Q 040291 3 RPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTD 40 (160)
Q Consensus 3 ~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~ 40 (160)
.++|.++-.+..| ..+|+.|+++||+|+++...
T Consensus 19 ~~kIgiIG~G~mG-----~alA~~L~~~G~~V~~~~r~ 51 (245)
T 3dtt_A 19 GMKIAVLGTGTVG-----RTMAGALADLGHEVTIGTRD 51 (245)
T ss_dssp CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEEESC
T ss_pred CCeEEEECCCHHH-----HHHHHHHHHCCCEEEEEeCC
Confidence 5678888544444 45789999999999987654
No 253
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=50.36 E-value=27 Score=23.97 Aligned_cols=34 Identities=18% Similarity=0.334 Sum_probs=23.5
Q ss_pred CeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCC
Q 040291 4 PHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTD 40 (160)
Q Consensus 4 ~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~ 40 (160)
++.++++.++.| + =..++++|+++|++|.++.-.
T Consensus 2 ~k~vlITGas~g-I--G~~ia~~l~~~G~~V~~~~r~ 35 (235)
T 3l77_A 2 MKVAVITGASRG-I--GEAIARALARDGYALALGARS 35 (235)
T ss_dssp CCEEEEESCSSH-H--HHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCcH-H--HHHHHHHHHHCCCEEEEEeCC
Confidence 456666644432 2 357899999999998876543
No 254
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=50.34 E-value=12 Score=27.13 Aligned_cols=32 Identities=28% Similarity=0.332 Sum_probs=25.0
Q ss_pred CeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCC
Q 040291 4 PHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTD 40 (160)
Q Consensus 4 ~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~ 40 (160)
.+|.++-.+..|+ .+|..|+++||+|+++...
T Consensus 16 ~~I~VIG~G~mG~-----~iA~~la~~G~~V~~~d~~ 47 (302)
T 1f0y_A 16 KHVTVIGGGLMGA-----GIAQVAAATGHTVVLVDQT 47 (302)
T ss_dssp CEEEEECCSHHHH-----HHHHHHHHTTCEEEEECSC
T ss_pred CEEEEECCCHHHH-----HHHHHHHhCCCeEEEEECC
Confidence 4688887666665 5788999999999987654
No 255
>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}
Probab=50.25 E-value=18 Score=24.77 Aligned_cols=37 Identities=19% Similarity=0.299 Sum_probs=23.2
Q ss_pred CCC-CeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCC
Q 040291 1 MNR-PHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTD 40 (160)
Q Consensus 1 m~~-~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~ 40 (160)
|+. .+.++++ ++.|-+ =..++++|+++|++|+++.-.
T Consensus 1 M~~~~k~vlVt-Gasggi--G~~~a~~l~~~G~~V~~~~r~ 38 (234)
T 2ehd_A 1 MEGMKGAVLIT-GASRGI--GEATARLLHAKGYRVGLMARD 38 (234)
T ss_dssp ---CCCEEEES-STTSHH--HHHHHHHHHHTTCEEEEEESC
T ss_pred CCCCCCEEEEE-CCCcHH--HHHHHHHHHHCCCEEEEEECC
Confidence 543 3455565 344433 367899999999999887653
No 256
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=50.23 E-value=6.5 Score=27.79 Aligned_cols=34 Identities=9% Similarity=0.174 Sum_probs=25.9
Q ss_pred CCCCeEEEEcCCCCCChHHHHHHHHHHHhCC----CEEEEEeC
Q 040291 1 MNRPHVLVLPIPAQGHVIPLLEFSQCLAKQG----FRVTFVNT 39 (160)
Q Consensus 1 m~~~~i~~~~~p~~GH~~P~l~la~~L~~rG----h~Vt~~~~ 39 (160)
|++++|.++-.+..|. .+++.|+++| |+|+++..
T Consensus 2 m~~m~i~iiG~G~mG~-----~~a~~l~~~g~~~~~~v~~~~~ 39 (262)
T 2rcy_A 2 MENIKLGFMGLGQMGS-----ALAHGIANANIIKKENLFYYGP 39 (262)
T ss_dssp CSSSCEEEECCSHHHH-----HHHHHHHHHTSSCGGGEEEECS
T ss_pred CCCCEEEEECcCHHHH-----HHHHHHHHCCCCCCCeEEEEeC
Confidence 7778899887655554 3678899999 89998754
No 257
>1jbe_A Chemotaxis protein CHEY; signaling protein; 1.08A {Escherichia coli} SCOP: c.23.1.1 PDB: 3chy_A 1a0o_A 1cey_A 1bdj_A 1eay_A 1f4v_A 1ffg_A 1ffs_A 1ffw_A 1fqw_A 2b1j_A 1chn_A 1djm_A 1kmi_Y* 1d4z_A 3olx_A 3olw_A 1cye_A 2che_A 2chf_A ...
Probab=50.18 E-value=38 Score=20.17 Aligned_cols=41 Identities=12% Similarity=0.169 Sum_probs=24.5
Q ss_pred HHHHHHHhcCCCCCccEEEecCCCcc--HHHHHHHh-------CCccEEEccc
Q 040291 94 EELIEDINSREDEKLDCFIADGYMAW--SMEVAKKM-------NVRGALFWPS 137 (160)
Q Consensus 94 ~~ll~~l~~~~~~~~d~vI~D~~~~~--~~~~A~~l-------giP~i~~~~~ 137 (160)
.+.++.+.. .+||++|.|...+. +..+.+++ ++|.+.+...
T Consensus 39 ~~a~~~~~~---~~~dlvi~D~~l~~~~g~~l~~~l~~~~~~~~~~ii~~s~~ 88 (128)
T 1jbe_A 39 VDALNKLQA---GGYGFVISDWNMPNMDGLELLKTIRAXXAMSALPVLMVTAE 88 (128)
T ss_dssp HHHHHHHTT---CCCCEEEEESCCSSSCHHHHHHHHHC--CCTTCCEEEEESS
T ss_pred HHHHHHHHh---cCCCEEEEeCCCCCCCHHHHHHHHHhhcccCCCcEEEEecC
Confidence 444554433 57899999987643 45555443 3676666543
No 258
>3cz5_A Two-component response regulator, LUXR family; structural genomics, protein structure initiative; 2.70A {Aurantimonas SP}
Probab=50.14 E-value=41 Score=20.91 Aligned_cols=32 Identities=16% Similarity=0.177 Sum_probs=20.1
Q ss_pred CCccEEEecCCCcc--HHHHHHHh-----CCccEEEccc
Q 040291 106 EKLDCFIADGYMAW--SMEVAKKM-----NVRGALFWPS 137 (160)
Q Consensus 106 ~~~d~vI~D~~~~~--~~~~A~~l-----giP~i~~~~~ 137 (160)
.+||+||.|.-... +..+.+++ ++|++.+...
T Consensus 50 ~~~dlii~D~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~ 88 (153)
T 3cz5_A 50 TTPDIVVMDLTLPGPGGIEATRHIRQWDGAARILIFTMH 88 (153)
T ss_dssp TCCSEEEECSCCSSSCHHHHHHHHHHHCTTCCEEEEESC
T ss_pred CCCCEEEEecCCCCCCHHHHHHHHHHhCCCCeEEEEECC
Confidence 46899999986542 44443332 5787776554
No 259
>2ywr_A Phosphoribosylglycinamide formyltransferase; rossmann fold, structural genomics, NPPSFA; 1.77A {Aquifex aeolicus}
Probab=50.11 E-value=33 Score=23.86 Aligned_cols=45 Identities=27% Similarity=0.392 Sum_probs=30.1
Q ss_pred HHHHHHHHHhcCCCC--CccEEEecCCCccHHHHHHHhCCccEEEccc
Q 040291 92 KLEELIEDINSREDE--KLDCFIADGYMAWSMEVAKKMNVRGALFWPS 137 (160)
Q Consensus 92 ~~~~ll~~l~~~~~~--~~d~vI~D~~~~~~~~~A~~lgiP~i~~~~~ 137 (160)
.++.+++.+.+.. . ...+||++.--..+...|+++|||+..+.+.
T Consensus 14 ~~~~~l~~l~~~~-~~~~i~~Vvs~~~~~~~~~~A~~~gIp~~~~~~~ 60 (216)
T 2ywr_A 14 NLQAIIDAIESGK-VNASIELVISDNPKAYAIERCKKHNVECKVIQRK 60 (216)
T ss_dssp HHHHHHHHHHTTS-SCEEEEEEEESCTTCHHHHHHHHHTCCEEECCGG
T ss_pred HHHHHHHHHHhCC-CCCeEEEEEeCCCChHHHHHHHHcCCCEEEeCcc
Confidence 3455666655421 2 3467888865555678899999999987654
No 260
>2jk1_A HUPR, hydrogenase transcriptional regulatory protein HU; nucleotide-binding, transcription regulation; 2.10A {Rhodobacter capsulatus} PDB: 2vui_B 2vuh_B
Probab=50.11 E-value=32 Score=21.02 Aligned_cols=32 Identities=13% Similarity=0.119 Sum_probs=20.0
Q ss_pred CCccEEEecCCCcc--HHHHHHHh-----CCccEEEccc
Q 040291 106 EKLDCFIADGYMAW--SMEVAKKM-----NVRGALFWPS 137 (160)
Q Consensus 106 ~~~d~vI~D~~~~~--~~~~A~~l-----giP~i~~~~~ 137 (160)
.+||+||.|...+. +..+.+++ ++|.+.+...
T Consensus 43 ~~~dlvl~D~~lp~~~g~~~~~~l~~~~~~~~ii~~s~~ 81 (139)
T 2jk1_A 43 EWVQVIICDQRMPGRTGVDFLTEVRERWPETVRIIITGY 81 (139)
T ss_dssp SCEEEEEEESCCSSSCHHHHHHHHHHHCTTSEEEEEESC
T ss_pred CCCCEEEEeCCCCCCcHHHHHHHHHHhCCCCcEEEEeCC
Confidence 46899999987643 44444333 4677766543
No 261
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=50.09 E-value=7.8 Score=30.12 Aligned_cols=30 Identities=20% Similarity=0.248 Sum_probs=21.2
Q ss_pred CeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEe
Q 040291 4 PHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVN 38 (160)
Q Consensus 4 ~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~ 38 (160)
+||+|+-.+-.| +.-|..|+++|++||++=
T Consensus 2 k~VvVIGaG~~G-----L~aA~~La~~G~~V~VlE 31 (501)
T 4dgk_A 2 KPTTVIGAGFGG-----LALAIRLQAAGIPVLLLE 31 (501)
T ss_dssp CCEEEECCHHHH-----HHHHHHHHHTTCCEEEEC
T ss_pred CCEEEECCcHHH-----HHHHHHHHHCCCcEEEEc
Confidence 456666544333 556778999999999974
No 262
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=50.07 E-value=15 Score=26.11 Aligned_cols=34 Identities=18% Similarity=0.166 Sum_probs=27.6
Q ss_pred CCCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCC
Q 040291 2 NRPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTD 40 (160)
Q Consensus 2 ~~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~ 40 (160)
.+++|.++-.+..|- .|++.|.++||+|+.+...
T Consensus 5 ~~mkI~IIG~G~~G~-----sLA~~L~~~G~~V~~~~~~ 38 (232)
T 3dfu_A 5 PRLRVGIFDDGSSTV-----NMAEKLDSVGHYVTVLHAP 38 (232)
T ss_dssp CCCEEEEECCSCCCS-----CHHHHHHHTTCEEEECSSG
T ss_pred CCcEEEEEeeCHHHH-----HHHHHHHHCCCEEEEecCH
Confidence 357899998888874 5899999999999987653
No 263
>3pe6_A Monoglyceride lipase; alpha-beta hydrolase fold, 2-arachidonyl-glycerol, M associated, hydrolase, hydrolase-hydrolase inhibitor comple; HET: ZYH; 1.35A {Homo sapiens} PDB: 3jw8_A 3jwe_A*
Probab=49.88 E-value=25 Score=24.11 Aligned_cols=36 Identities=14% Similarity=0.034 Sum_probs=27.4
Q ss_pred eEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCC
Q 040291 5 HVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTD 40 (160)
Q Consensus 5 ~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~ 40 (160)
.++++-.+..|+..-+..+++.|+++|++|..+--.
T Consensus 43 ~~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 78 (303)
T 3pe6_A 43 ALIFVSHGAGEHSGRYEELARMLMGLDLLVFAHDHV 78 (303)
T ss_dssp EEEEEECCTTCCGGGGHHHHHHHHHTTEEEEEECCT
T ss_pred eEEEEECCCCchhhHHHHHHHHHHhCCCcEEEeCCC
Confidence 345555566677778889999999999999887543
No 264
>1rcu_A Conserved hypothetical protein VT76; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.50A {Thermotoga maritima} SCOP: c.129.1.1
Probab=49.84 E-value=34 Score=23.53 Aligned_cols=34 Identities=26% Similarity=0.256 Sum_probs=25.2
Q ss_pred CCeEEEEcCCC---C----CChHHHHHHHHHHHhCCCEEEE
Q 040291 3 RPHVLVLPIPA---Q----GHVIPLLEFSQCLAKQGFRVTF 36 (160)
Q Consensus 3 ~~~i~~~~~p~---~----GH~~P~l~la~~L~~rGh~Vt~ 36 (160)
...|.++.... . -...-..+|++.|+++|+.|..
T Consensus 23 m~~IaV~Gss~~~~~~~~~~~~~~A~~lg~~LA~~G~~vVs 63 (195)
T 1rcu_A 23 MKKVVVVGYSGPVNKSPVSELRDICLELGRTLAKKGYLVFN 63 (195)
T ss_dssp CCEEEEEECCSCTTSTTTGGGHHHHHHHHHHHHHTTCEEEE
T ss_pred CCeEEEEecCCCCCccccHHHHHHHHHHHHHHHHCCCEEEe
Confidence 34688888542 2 4567889999999999987665
No 265
>3r8n_B 30S ribosomal protein S2; protein biosynthesis, RNA, tRNA, transfer RNA, 16S ribosomal subunit, RRF; 3.00A {Escherichia coli} PDB: 2ykr_B 3fih_B* 3j18_B* 2wwl_B 3oar_B 3oaq_B 3ofb_B 3ofa_B 3ofp_B 3ofx_B 3ofy_B 3ofo_B 3r8o_B 4a2i_B 4gd1_B 4gd2_B 3i1m_B 1vs7_B* 3e1a_B 3e1c_B ...
Probab=49.68 E-value=8.2 Score=27.25 Aligned_cols=31 Identities=13% Similarity=0.154 Sum_probs=23.1
Q ss_pred CccE-EEecCCCc-cHHHHHHHhCCccEEEccc
Q 040291 107 KLDC-FIADGYMA-WSMEVAKKMNVRGALFWPS 137 (160)
Q Consensus 107 ~~d~-vI~D~~~~-~~~~~A~~lgiP~i~~~~~ 137 (160)
.||+ +|.|+-.- -+..-|.++|||.|.+.-+
T Consensus 149 ~Pdllvv~Dp~~e~~ai~Ea~~l~IP~IalvDT 181 (218)
T 3r8n_B 149 LPDALFVIDADHEHIAIKEANNLGIPVFAIVDT 181 (218)
T ss_dssp CCCSCEEEETGGGHHHHHHHHHHTCCCEEECCS
T ss_pred CCCeEEecCcccccHHHHHHHHhCCCEEEEEeC
Confidence 5886 45898653 3566799999999997643
No 266
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=49.57 E-value=14 Score=24.96 Aligned_cols=27 Identities=22% Similarity=0.164 Sum_probs=20.1
Q ss_pred CCCCChHHHHHHHHHHHhCCCEEEEEeCC
Q 040291 12 PAQGHVIPLLEFSQCLAKQGFRVTFVNTD 40 (160)
Q Consensus 12 p~~GH~~P~l~la~~L~~rGh~Vt~~~~~ 40 (160)
++.|.+- ..++++|+++|++|+.+.-.
T Consensus 7 GatG~iG--~~l~~~L~~~g~~V~~~~R~ 33 (224)
T 3h2s_A 7 GATGRAG--SAIVAEARRRGHEVLAVVRD 33 (224)
T ss_dssp TTTSHHH--HHHHHHHHHTTCEEEEEESC
T ss_pred cCCCHHH--HHHHHHHHHCCCEEEEEEec
Confidence 3444443 57899999999999998654
No 267
>1yio_A Response regulatory protein; transcription regulation, DNA binding protein; 2.20A {Pseudomonas fluorescens} SCOP: a.4.6.2 c.23.1.1 PDB: 1zn2_A
Probab=49.28 E-value=25 Score=23.38 Aligned_cols=32 Identities=16% Similarity=0.315 Sum_probs=20.9
Q ss_pred CCccEEEecCCCcc--HHHHHHHh-----CCccEEEccc
Q 040291 106 EKLDCFIADGYMAW--SMEVAKKM-----NVRGALFWPS 137 (160)
Q Consensus 106 ~~~d~vI~D~~~~~--~~~~A~~l-----giP~i~~~~~ 137 (160)
.+||+||.|...+. +..+++++ ++|++.+...
T Consensus 47 ~~~dlvl~D~~lp~~~g~~~~~~l~~~~~~~~ii~ls~~ 85 (208)
T 1yio_A 47 EQHGCLVLDMRMPGMSGIELQEQLTAISDGIPIVFITAH 85 (208)
T ss_dssp TSCEEEEEESCCSSSCHHHHHHHHHHTTCCCCEEEEESC
T ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCCEEEEeCC
Confidence 57899999987643 44444433 5788777543
No 268
>1u0t_A Inorganic polyphosphate/ATP-NAD kinase; alpha-beta, beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Mycobacterium tuberculosis} SCOP: e.52.1.1 PDB: 1u0r_A 1y3i_A* 1y3h_A
Probab=49.02 E-value=22 Score=26.15 Aligned_cols=40 Identities=10% Similarity=0.183 Sum_probs=28.9
Q ss_pred CCC-CeEEEEcCCCCCCh-HHHHHHHHHHHhCCCEEEEEeCC
Q 040291 1 MNR-PHVLVLPIPAQGHV-IPLLEFSQCLAKQGFRVTFVNTD 40 (160)
Q Consensus 1 m~~-~~i~~~~~p~~GH~-~P~l~la~~L~~rGh~Vt~~~~~ 40 (160)
|.. .+++++.-|..+.. .-..++.+.|.++|++|.+..+.
T Consensus 1 m~~m~ki~iI~n~~~~~~~~~~~~l~~~L~~~g~~v~~~~~~ 42 (307)
T 1u0t_A 1 MTAHRSVLLVVHTGRDEATETARRVEKVLGDNKIALRVLSAE 42 (307)
T ss_dssp ----CEEEEEESSSGGGGSHHHHHHHHHHHTTTCEEEEEC--
T ss_pred CCCCCEEEEEEeCCCHHHHHHHHHHHHHHHHCCCEEEEecch
Confidence 544 47999999988876 44778889999999999876543
No 269
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=48.98 E-value=25 Score=25.02 Aligned_cols=33 Identities=15% Similarity=0.215 Sum_probs=24.5
Q ss_pred eEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCC
Q 040291 5 HVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTD 40 (160)
Q Consensus 5 ~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~ 40 (160)
|.++++.++.| ==..+|++|++.|.+|.++.-.
T Consensus 3 K~vlVTGas~G---IG~aia~~la~~Ga~V~~~~~~ 35 (247)
T 3ged_A 3 RGVIVTGGGHG---IGKQICLDFLEAGDKVCFIDID 35 (247)
T ss_dssp CEEEEESTTSH---HHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEecCCCH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 56777766664 2357899999999999887543
No 270
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=48.75 E-value=26 Score=27.16 Aligned_cols=32 Identities=34% Similarity=0.351 Sum_probs=25.0
Q ss_pred CCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeC
Q 040291 3 RPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNT 39 (160)
Q Consensus 3 ~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~ 39 (160)
..||.++-.+..| +..|+.|+++|++|+..=.
T Consensus 9 ~k~v~viG~G~sG-----~s~A~~l~~~G~~V~~~D~ 40 (451)
T 3lk7_A 9 NKKVLVLGLARSG-----EAAARLLAKLGAIVTVNDG 40 (451)
T ss_dssp TCEEEEECCTTTH-----HHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEEeeCHHH-----HHHHHHHHhCCCEEEEEeC
Confidence 4688888876655 3469999999999998654
No 271
>3n7t_A Macrophage binding protein; seattle structural genomics center for infectious disease, S macrophage, pathogenic fungus, coccidioidomycosis; 2.10A {Coccidioides immitis} SCOP: c.23.16.0
Probab=48.58 E-value=63 Score=22.92 Aligned_cols=38 Identities=21% Similarity=0.181 Sum_probs=27.2
Q ss_pred CeEEEEcCCCC----------CC-hHHHHHHHHHHHhCCCEEEEEeCCC
Q 040291 4 PHVLVLPIPAQ----------GH-VIPLLEFSQCLAKQGFRVTFVNTDY 41 (160)
Q Consensus 4 ~~i~~~~~p~~----------GH-~~P~l~la~~L~~rGh~Vt~~~~~~ 41 (160)
++|+++-.... |- ..=+..-...|.+.|++|+++++..
T Consensus 10 kkvlvvlt~~~~~~~~~g~~tG~~~~E~~~p~~~l~~aG~~V~~aSp~g 58 (247)
T 3n7t_A 10 RKALLAITSAHPPFWPDGKRTGLFFSEALHPFNELTAAGFEVDVASETG 58 (247)
T ss_dssp SEEEEECCCCCCBCSTTSCBCCBCHHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CeEEEEECCCCcccCCCCCCCcccHHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 57887766532 21 3456666778899999999999764
No 272
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=48.36 E-value=10 Score=29.97 Aligned_cols=35 Identities=17% Similarity=0.421 Sum_probs=26.4
Q ss_pred CCCCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCC
Q 040291 1 MNRPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTD 40 (160)
Q Consensus 1 m~~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~ 40 (160)
|.+++|.++-.+..| ..+|+.|+++||+|+++...
T Consensus 13 ~~~~~IgvIGlG~MG-----~~lA~~La~~G~~V~v~~r~ 47 (480)
T 2zyd_A 13 MSKQQIGVVGMAVMG-----RNLALNIESRGYTVSIFNRS 47 (480)
T ss_dssp --CBSEEEECCSHHH-----HHHHHHHHTTTCCEEEECSS
T ss_pred cCCCeEEEEccHHHH-----HHHHHHHHhCCCeEEEEeCC
Confidence 567788888776666 45899999999999987543
No 273
>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*
Probab=48.29 E-value=82 Score=23.44 Aligned_cols=35 Identities=14% Similarity=0.184 Sum_probs=25.9
Q ss_pred CeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCC
Q 040291 4 PHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTD 40 (160)
Q Consensus 4 ~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~ 40 (160)
.+|.+-. .+.|-..-...|+++|.++| +|.+.++.
T Consensus 41 ~~iwih~-~s~G~~~~~~~L~~~L~~~~-~v~v~~~~ 75 (374)
T 2xci_A 41 GALWVHT-ASIGEFNTFLPILKELKREH-RILLTYFS 75 (374)
T ss_dssp TCEEEEC-SSHHHHHHHHHHHHHHHHHS-CEEEEESC
T ss_pred CCEEEEc-CCHHHHHHHHHHHHHHHhcC-CEEEEEcC
Confidence 3455444 45677889999999999999 88766553
No 274
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=48.22 E-value=35 Score=24.21 Aligned_cols=37 Identities=14% Similarity=0.170 Sum_probs=25.9
Q ss_pred CCCCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCC
Q 040291 1 MNRPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTD 40 (160)
Q Consensus 1 m~~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~ 40 (160)
|-+.++++++.++.| + =..++++|+++|++|.++.-.
T Consensus 1 Ml~~k~~lVTGas~G-I--G~aia~~la~~G~~V~~~~r~ 37 (264)
T 3tfo_A 1 MVMDKVILITGASGG-I--GEGIARELGVAGAKILLGARR 37 (264)
T ss_dssp CCTTCEEEESSTTSH-H--HHHHHHHHHHTTCEEEEEESS
T ss_pred CCCCCEEEEeCCccH-H--HHHHHHHHHHCCCEEEEEECC
Confidence 445567777755542 2 257899999999999887543
No 275
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=48.21 E-value=7.2 Score=28.88 Aligned_cols=33 Identities=24% Similarity=0.294 Sum_probs=22.6
Q ss_pred CCCCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEe
Q 040291 1 MNRPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVN 38 (160)
Q Consensus 1 m~~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~ 38 (160)
|++-.|+|+-.+-.| +.+|..|+++|++|+++=
T Consensus 2 Me~yDViIVGaGpaG-----l~~A~~La~~G~~V~v~E 34 (397)
T 3oz2_A 2 METYDVLVVGGGPGG-----STAARYAAKYGLKTLMIE 34 (397)
T ss_dssp EEEEEEEEECCSHHH-----HHHHHHHHHTTCCEEEEC
T ss_pred CCCCCEEEECcCHHH-----HHHHHHHHHCCCcEEEEe
Confidence 444456666433333 567889999999999983
No 276
>3av3_A Phosphoribosylglycinamide formyltransferase; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; HET: MSE; 1.70A {Geobacillus kaustophilus}
Probab=48.13 E-value=33 Score=23.80 Aligned_cols=45 Identities=18% Similarity=0.302 Sum_probs=29.1
Q ss_pred HHHHHHHHhcCC-CCCccEEEecCCCccHHHHHHHhCCccEEEccc
Q 040291 93 LEELIEDINSRE-DEKLDCFIADGYMAWSMEVAKKMNVRGALFWPS 137 (160)
Q Consensus 93 ~~~ll~~l~~~~-~~~~d~vI~D~~~~~~~~~A~~lgiP~i~~~~~ 137 (160)
++.+++.+.+.. +....+||++.--..+...|+++|||+..+.+.
T Consensus 17 ~~~~l~~l~~~~l~~~I~~Vit~~~~~~v~~~A~~~gIp~~~~~~~ 62 (212)
T 3av3_A 17 FQAIVDAAKRGDLPARVALLVCDRPGAKVIERAARENVPAFVFSPK 62 (212)
T ss_dssp HHHHHHHHHTTCCCEEEEEEEESSTTCHHHHHHHHTTCCEEECCGG
T ss_pred HHHHHHHHHhCCCCCeEEEEEeCCCCcHHHHHHHHcCCCEEEeCcc
Confidence 455566654321 124556888854445677899999999987653
No 277
>3q9s_A DNA-binding response regulator; DNA binding protein; 2.40A {Deinococcus radiodurans}
Probab=48.10 E-value=33 Score=23.91 Aligned_cols=43 Identities=7% Similarity=0.010 Sum_probs=27.1
Q ss_pred HHHHHHHHhcCCCCCccEEEecCCCcc--HHHHHHHh----CCccEEEccch
Q 040291 93 LEELIEDINSREDEKLDCFIADGYMAW--SMEVAKKM----NVRGALFWPSS 138 (160)
Q Consensus 93 ~~~ll~~l~~~~~~~~d~vI~D~~~~~--~~~~A~~l----giP~i~~~~~~ 138 (160)
..+.++.+.. .+||+||.|...+. +..+.+++ ++|.+.+....
T Consensus 70 ~~~al~~~~~---~~~DlvllD~~lp~~~G~~l~~~lr~~~~~~iI~lt~~~ 118 (249)
T 3q9s_A 70 AMNGLIKARE---DHPDLILLDLGLPDFDGGDVVQRLRKNSALPIIVLTARD 118 (249)
T ss_dssp HHHHHHHHHH---SCCSEEEEECCSCHHHHHHHHHHHHTTCCCCEEEEESCC
T ss_pred HHHHHHHHhc---CCCCEEEEcCCCCCCCHHHHHHHHHcCCCCCEEEEECCC
Confidence 3444555443 57999999998764 34444443 58887776543
No 278
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=48.08 E-value=27 Score=25.06 Aligned_cols=32 Identities=19% Similarity=0.215 Sum_probs=24.4
Q ss_pred CCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeC
Q 040291 3 RPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNT 39 (160)
Q Consensus 3 ~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~ 39 (160)
+++|+++-.+..|. .+++.|++.||+|+++..
T Consensus 4 ~~~i~iiG~G~~G~-----~~a~~l~~~g~~V~~~~~ 35 (301)
T 3cky_A 4 SIKIGFIGLGAMGK-----PMAINLLKEGVTVYAFDL 35 (301)
T ss_dssp CCEEEEECCCTTHH-----HHHHHHHHTTCEEEEECS
T ss_pred CCEEEEECccHHHH-----HHHHHHHHCCCeEEEEeC
Confidence 57899997666664 468889999999987654
No 279
>4e5v_A Putative THUA-like protein; THUA-like proteins, trehalose utilisation, structural genomi center for structural genomics, JCSG; 1.75A {Parabacteroides merdae}
Probab=47.93 E-value=33 Score=24.98 Aligned_cols=38 Identities=24% Similarity=0.380 Sum_probs=27.9
Q ss_pred CCCeEEEEcCCCCCChHHH--HHHHHHHHhCC-CEEEEEeCC
Q 040291 2 NRPHVLVLPIPAQGHVIPL--LEFSQCLAKQG-FRVTFVNTD 40 (160)
Q Consensus 2 ~~~~i~~~~~p~~GH~~P~--l~la~~L~~rG-h~Vt~~~~~ 40 (160)
++.+++++. +..+|-.+- ..|.+.|.++| ++|++....
T Consensus 3 ~~~kvLiv~-G~~~H~~~~~~~~l~~~l~~~g~f~V~~~~d~ 43 (281)
T 4e5v_A 3 KPIKTLLIT-GQNNHNWQVSHVVLKQILENSGRFDVDFVISP 43 (281)
T ss_dssp CCEEEEEEE-SCCSSCHHHHHHHHHHHHHHTTSEEEEEEECC
T ss_pred CceEEEEEc-CCCCCChHHHHHHHHHHHHhcCCEEEEEEeCC
Confidence 356889884 555886444 46777778888 999998764
No 280
>3u5c_A 40S ribosomal protein S0-A; translation, ribosome, ribosomal, ribosomal R ribosomal protein, eukaryotic ribosome, RNA-protein C; 3.00A {Saccharomyces cerevisiae} PDB: 3izb_A 3o30_A 3o2z_A 3u5g_A 3jyv_B* 1s1h_B
Probab=47.87 E-value=15 Score=26.60 Aligned_cols=29 Identities=14% Similarity=0.035 Sum_probs=21.9
Q ss_pred CccEEE-ecCCCc-cHHHHHHHhCCccEEEc
Q 040291 107 KLDCFI-ADGYMA-WSMEVAKKMNVRGALFW 135 (160)
Q Consensus 107 ~~d~vI-~D~~~~-~~~~~A~~lgiP~i~~~ 135 (160)
.||+|| .|+-.- -+..-|.++|||.|.+.
T Consensus 117 ~PdllvV~Dp~~d~~ai~EA~~l~IP~Ial~ 147 (252)
T 3u5c_A 117 EPRLVIVTDPRSDAQAIKEASYVNIPVIALT 147 (252)
T ss_dssp CCSEEEESCTTTTHHHHHHHHTTTCCEEEEE
T ss_pred CCceEEEeCCccchHHHHHHHHcCCCEEEEE
Confidence 578655 888664 35567999999999875
No 281
>3cfy_A Putative LUXO repressor protein; structural genomics, unknown function, uncharacterized protein, signal receiver domain; 2.50A {Vibrio parahaemolyticus rimd 2210633}
Probab=47.80 E-value=29 Score=21.33 Aligned_cols=32 Identities=13% Similarity=-0.048 Sum_probs=19.0
Q ss_pred CCccEEEecCCCcc--HHHHHHHh-----CCccEEEccc
Q 040291 106 EKLDCFIADGYMAW--SMEVAKKM-----NVRGALFWPS 137 (160)
Q Consensus 106 ~~~d~vI~D~~~~~--~~~~A~~l-----giP~i~~~~~ 137 (160)
.+||+||.|...+. +..+.+++ ++|.+.+...
T Consensus 47 ~~~dlvllD~~l~~~~g~~l~~~l~~~~~~~~ii~ls~~ 85 (137)
T 3cfy_A 47 SKPQLIILDLKLPDMSGEDVLDWINQNDIPTSVIIATAH 85 (137)
T ss_dssp HCCSEEEECSBCSSSBHHHHHHHHHHTTCCCEEEEEESS
T ss_pred cCCCEEEEecCCCCCCHHHHHHHHHhcCCCCCEEEEEec
Confidence 36899998876542 44444333 4666666543
No 282
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=47.75 E-value=13 Score=27.12 Aligned_cols=33 Identities=12% Similarity=0.176 Sum_probs=25.2
Q ss_pred CCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCC
Q 040291 3 RPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTD 40 (160)
Q Consensus 3 ~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~ 40 (160)
+++|.++-.+..| ..+++.|+++||+|+++...
T Consensus 7 ~~~I~iIG~G~mG-----~~~a~~l~~~G~~V~~~dr~ 39 (303)
T 3g0o_A 7 DFHVGIVGLGSMG-----MGAARSCLRAGLSTWGADLN 39 (303)
T ss_dssp CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSC
T ss_pred CCeEEEECCCHHH-----HHHHHHHHHCCCeEEEEECC
Confidence 4678888655555 36789999999999988543
No 283
>3sty_A Methylketone synthase 1; alpha/beta hydrolase, decarboxylase, hydrolase; HET: DKA; 1.70A {Lycopersicon hirsutum F} PDB: 3stu_A* 3stt_A* 3stv_A* 3stw_A* 3stx_A*
Probab=47.67 E-value=29 Score=23.46 Aligned_cols=36 Identities=14% Similarity=0.147 Sum_probs=26.6
Q ss_pred CeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCC
Q 040291 4 PHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTD 40 (160)
Q Consensus 4 ~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~ 40 (160)
+-|+++ .+..|...-+..+++.|+++|++|..+--.
T Consensus 13 ~~vvll-HG~~~~~~~~~~~~~~l~~~g~~v~~~D~~ 48 (267)
T 3sty_A 13 KHFVLV-HAAFHGAWCWYKIVALMRSSGHNVTALDLG 48 (267)
T ss_dssp CEEEEE-CCTTCCGGGGHHHHHHHHHTTCEEEEECCT
T ss_pred CeEEEE-CCCCCCcchHHHHHHHHHhcCCeEEEeccc
Confidence 335554 456677777889999999999999887543
No 284
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=47.67 E-value=27 Score=27.22 Aligned_cols=35 Identities=29% Similarity=0.358 Sum_probs=24.5
Q ss_pred CCCCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCC
Q 040291 1 MNRPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTD 40 (160)
Q Consensus 1 m~~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~ 40 (160)
|+..+|+++- .|-+- ..+++.|+++|++|+++.-.
T Consensus 1 M~~k~VlViG---aG~iG--~~ia~~L~~~G~~V~v~~R~ 35 (450)
T 1ff9_A 1 MATKSVLMLG---SGFVT--RPTLDVLTDSGIKVTVACRT 35 (450)
T ss_dssp -CCCEEEEEC---CSTTH--HHHHHHHHTTTCEEEEEESS
T ss_pred CCCCEEEEEC---CCHHH--HHHHHHHHhCcCEEEEEECC
Confidence 7777888884 34443 35788899999998887543
No 285
>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*
Probab=47.63 E-value=24 Score=25.80 Aligned_cols=34 Identities=26% Similarity=0.409 Sum_probs=23.0
Q ss_pred CCCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeC
Q 040291 2 NRPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNT 39 (160)
Q Consensus 2 ~~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~ 39 (160)
+.++|+++ ++.|-+- ..++++|.++|++|+.+.-
T Consensus 26 ~~~~vlVt--GatG~iG--~~l~~~L~~~g~~V~~~~r 59 (343)
T 2b69_A 26 DRKRILIT--GGAGFVG--SHLTDKLMMDGHEVTVVDN 59 (343)
T ss_dssp -CCEEEEE--TTTSHHH--HHHHHHHHHTTCEEEEEEC
T ss_pred CCCEEEEE--cCccHHH--HHHHHHHHHCCCEEEEEeC
Confidence 34555554 4444432 5788999999999998864
No 286
>3u7q_A Nitrogenase molybdenum-iron protein alpha chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1g21_A* 1g20_A* 1fp4_A* 1m1n_A* 1l5h_A* 1m1y_A* 1m34_A* 1n2c_A* 2afh_A* 2afi_A* 2afk_A* 2min_A* 3min_A* 3k1a_A* 1h1l_A* 1qgu_A* 1qh1_A* 1qh8_A*
Probab=47.59 E-value=16 Score=28.97 Aligned_cols=26 Identities=15% Similarity=-0.060 Sum_probs=21.5
Q ss_pred CCccEEEecCCCccHHHHHHHhCCccEEE
Q 040291 106 EKLDCFIADGYMAWSMEVAKKMNVRGALF 134 (160)
Q Consensus 106 ~~~d~vI~D~~~~~~~~~A~~lgiP~i~~ 134 (160)
.+||++|.. .....+|+++|||++.+
T Consensus 416 ~~pDL~ig~---~~~~~ia~k~gIP~~~~ 441 (492)
T 3u7q_A 416 IKPDLIGSG---IKEKFIFQKMGIPFREM 441 (492)
T ss_dssp HCCSEEEEC---HHHHHHHHHTTCCEEES
T ss_pred cCCcEEEeC---cchhHHHHHcCCCEEec
Confidence 479999986 45678999999999974
No 287
>4ao6_A Esterase; hydrolase, thermo label; 1.60A {Unidentified} PDB: 4ao7_A 4ao8_A
Probab=47.58 E-value=26 Score=24.53 Aligned_cols=37 Identities=11% Similarity=0.128 Sum_probs=23.9
Q ss_pred eEEEEcCCCCCCh--HHHHHHHHHHHhCCCEEEEEeCCC
Q 040291 5 HVLVLPIPAQGHV--IPLLEFSQCLAKQGFRVTFVNTDY 41 (160)
Q Consensus 5 ~i~~~~~p~~GH~--~P~l~la~~L~~rGh~Vt~~~~~~ 41 (160)
-++++..++.+|- .-+..+++.|+++|+.|-.+-...
T Consensus 57 p~Vl~~HG~g~~~~~~~~~~~a~~la~~Gy~Vl~~D~rG 95 (259)
T 4ao6_A 57 RLVLLGHGGTTHKKVEYIEQVAKLLVGRGISAMAIDGPG 95 (259)
T ss_dssp EEEEEEC--------CHHHHHHHHHHHTTEEEEEECCCC
T ss_pred CEEEEeCCCcccccchHHHHHHHHHHHCCCeEEeeccCC
Confidence 4677777777774 347889999999999888765543
No 288
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=47.56 E-value=13 Score=28.67 Aligned_cols=36 Identities=14% Similarity=0.210 Sum_probs=26.5
Q ss_pred CCCCeEEEEcCCCCCChHHHHHHHHHHHhC--CCEEEEEeCCC
Q 040291 1 MNRPHVLVLPIPAQGHVIPLLEFSQCLAKQ--GFRVTFVNTDY 41 (160)
Q Consensus 1 m~~~~i~~~~~p~~GH~~P~l~la~~L~~r--Gh~Vt~~~~~~ 41 (160)
|++.+|+++-.+..| +..|..|+++ |++||++-...
T Consensus 1 M~~~~VvIIGgG~aG-----l~aA~~L~~~~~~~~V~vie~~~ 38 (449)
T 3kd9_A 1 MSLKKVVIIGGGAAG-----MSAASRVKRLKPEWDVKVFEATE 38 (449)
T ss_dssp -CCCEEEEECCSHHH-----HHHHHHHHHHCTTSEEEEECSSS
T ss_pred CCcCcEEEECCcHHH-----HHHHHHHHHhCcCCCEEEEECCC
Confidence 777889988755555 5667788876 89999986544
No 289
>2hy5_A Putative sulfurtransferase DSRE; DSRE, DSRF, sulfur, structural genomics, PSI, protein initiative, berkeley structural genomics center, BSGC, TRAN; 1.72A {Allochromatium vinosum} SCOP: c.114.1.1 PDB: 2hyb_A
Probab=47.37 E-value=18 Score=22.83 Aligned_cols=27 Identities=7% Similarity=0.106 Sum_probs=21.7
Q ss_pred ChHHHHHHHHHHHhCCCEE-EEEeCCCC
Q 040291 16 HVIPLLEFSQCLAKQGFRV-TFVNTDYD 42 (160)
Q Consensus 16 H~~P~l~la~~L~~rGh~V-t~~~~~~~ 42 (160)
.....+.++.++.+.||+| +++-..+-
T Consensus 16 ~~~~al~~a~a~~~~g~~v~~vff~~dG 43 (130)
T 2hy5_A 16 ASDSAYQFAKAALEKGHEIFRVFFYHDG 43 (130)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEEECGGG
T ss_pred HHHHHHHHHHHHHhcCCeeCEEEEechH
Confidence 3467799999999999999 88766543
No 290
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=47.23 E-value=22 Score=25.86 Aligned_cols=33 Identities=12% Similarity=0.236 Sum_probs=22.9
Q ss_pred CCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeC
Q 040291 3 RPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNT 39 (160)
Q Consensus 3 ~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~ 39 (160)
.++|++. ++.|-+- ..++++|+++||+|+.+.-
T Consensus 20 ~~~vlVT--GasG~iG--~~l~~~L~~~g~~V~~~~r 52 (330)
T 2pzm_A 20 HMRILIT--GGAGCLG--SNLIEHWLPQGHEILVIDN 52 (330)
T ss_dssp CCEEEEE--TTTSHHH--HHHHHHHGGGTCEEEEEEC
T ss_pred CCEEEEE--CCCCHHH--HHHHHHHHHCCCEEEEEEC
Confidence 4555544 4444442 5789999999999998765
No 291
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=47.11 E-value=19 Score=26.65 Aligned_cols=37 Identities=19% Similarity=0.275 Sum_probs=24.9
Q ss_pred CCCCeEEEEcCCCCCChHHHHHHHHHHHhC-CCEEEEEeCCC
Q 040291 1 MNRPHVLVLPIPAQGHVIPLLEFSQCLAKQ-GFRVTFVNTDY 41 (160)
Q Consensus 1 m~~~~i~~~~~p~~GH~~P~l~la~~L~~r-Gh~Vt~~~~~~ 41 (160)
|..++|+++ ++.|-+- ..|+++|.++ ||+|+.+.-..
T Consensus 22 m~~~~vlVt--GatG~iG--~~l~~~L~~~~g~~V~~~~r~~ 59 (372)
T 3slg_A 22 MKAKKVLIL--GVNGFIG--HHLSKRILETTDWEVFGMDMQT 59 (372)
T ss_dssp -CCCEEEEE--SCSSHHH--HHHHHHHHHHSSCEEEEEESCC
T ss_pred cCCCEEEEE--CCCChHH--HHHHHHHHhCCCCEEEEEeCCh
Confidence 344566654 4455443 5788999998 99999987543
No 292
>3rm3_A MGLP, thermostable monoacylglycerol lipase; alpha/beta hydrolase fold, hydrolase; 1.20A {Bacillus SP} PDB: 3rli_A
Probab=47.07 E-value=26 Score=23.98 Aligned_cols=36 Identities=17% Similarity=0.206 Sum_probs=27.9
Q ss_pred eEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCC
Q 040291 5 HVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTD 40 (160)
Q Consensus 5 ~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~ 40 (160)
..+++-.+..|+..-+..+++.|+++|+.|..+--.
T Consensus 41 ~~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~d~~ 76 (270)
T 3rm3_A 41 VGVLLVHGFTGTPHSMRPLAEAYAKAGYTVCLPRLK 76 (270)
T ss_dssp EEEEEECCTTCCGGGTHHHHHHHHHTTCEEEECCCT
T ss_pred eEEEEECCCCCChhHHHHHHHHHHHCCCEEEEeCCC
Confidence 455555677777777899999999999998876544
No 293
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=47.05 E-value=13 Score=27.51 Aligned_cols=33 Identities=24% Similarity=0.377 Sum_probs=25.4
Q ss_pred CCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCC
Q 040291 3 RPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTD 40 (160)
Q Consensus 3 ~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~ 40 (160)
..+|+|+-.+..| +..|.+|+++|++|+++--.
T Consensus 5 ~~dVvIIGgGi~G-----l~~A~~La~~G~~V~lle~~ 37 (382)
T 1y56_B 5 KSEIVVIGGGIVG-----VTIAHELAKRGEEVTVIEKR 37 (382)
T ss_dssp BCSEEEECCSHHH-----HHHHHHHHHTTCCEEEECSS
T ss_pred cCCEEEECCCHHH-----HHHHHHHHHCCCeEEEEeCC
Confidence 3568887666555 67889999999999998654
No 294
>1jkx_A GART;, phosphoribosylglycinamide formyltransferase; purine biosynthesis, anti-cancer agent; HET: 138; 1.60A {Escherichia coli} SCOP: c.65.1.1 PDB: 1cdd_A 1cde_A* 1c2t_A* 1grc_A 1gar_A* 2gar_A 3gar_A 1c3e_A*
Probab=46.98 E-value=41 Score=23.36 Aligned_cols=45 Identities=11% Similarity=0.262 Sum_probs=30.8
Q ss_pred HHHHHHHHHhcCC-CCCccEEEecCCCccHHHHHHHhCCccEEEcc
Q 040291 92 KLEELIEDINSRE-DEKLDCFIADGYMAWSMEVAKKMNVRGALFWP 136 (160)
Q Consensus 92 ~~~~ll~~l~~~~-~~~~d~vI~D~~~~~~~~~A~~lgiP~i~~~~ 136 (160)
.++.+++.+.+.. .....+||++.--..+...|+++|||+..+.+
T Consensus 13 nl~ali~~~~~~~~~~~i~~Vis~~~~~~~~~~A~~~gIp~~~~~~ 58 (212)
T 1jkx_A 13 NLQAIIDACKTNKIKGTVRAVFSNKADAFGLERARQAGIATHTLIA 58 (212)
T ss_dssp HHHHHHHHHHTTSSSSEEEEEEESCTTCHHHHHHHHTTCEEEECCG
T ss_pred HHHHHHHHHHcCCCCceEEEEEeCCCchHHHHHHHHcCCcEEEeCc
Confidence 4566776655421 12356788886555577889999999998754
No 295
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=46.94 E-value=28 Score=25.16 Aligned_cols=34 Identities=26% Similarity=0.314 Sum_probs=22.9
Q ss_pred CCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCC
Q 040291 3 RPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTD 40 (160)
Q Consensus 3 ~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~ 40 (160)
.++|++. ++.|-+- ..++++|+++||+|+.+.-.
T Consensus 11 ~~~vlVT--GatG~iG--~~l~~~L~~~g~~V~~~~r~ 44 (342)
T 1y1p_A 11 GSLVLVT--GANGFVA--SHVVEQLLEHGYKVRGTARS 44 (342)
T ss_dssp TCEEEEE--TTTSHHH--HHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEE--CCccHHH--HHHHHHHHHCCCEEEEEeCC
Confidence 3455444 4445443 56889999999999987653
No 296
>3c97_A Signal transduction histidine kinase; structural genomics, signaling, PSI-2, protein structure initiative; 1.70A {Aspergillus oryzae RIB40}
Probab=46.84 E-value=47 Score=20.23 Aligned_cols=21 Identities=24% Similarity=0.346 Sum_probs=14.1
Q ss_pred CCccEEEecCCCcc--HHHHHHH
Q 040291 106 EKLDCFIADGYMAW--SMEVAKK 126 (160)
Q Consensus 106 ~~~d~vI~D~~~~~--~~~~A~~ 126 (160)
.+||+||.|...+. +..+.++
T Consensus 53 ~~~dlvllD~~lp~~~g~~~~~~ 75 (140)
T 3c97_A 53 RQFDVIIMDIQMPVMDGLEAVSE 75 (140)
T ss_dssp SCCSEEEECTTCCSSCHHHHHHH
T ss_pred CCCCEEEEeCCCCCCcHHHHHHH
Confidence 47999999987643 4444443
No 297
>3md9_A Hemin-binding periplasmic protein HMUT; transport protein, alpha beta protein, rigid helical backbon substrate-free, heme transport; 1.50A {Yersinia pestis} PDB: 3nu1_A*
Probab=46.78 E-value=25 Score=24.62 Aligned_cols=30 Identities=7% Similarity=-0.118 Sum_probs=21.0
Q ss_pred CCccEEEecCCCcc--HHHHHHHhCCccEEEc
Q 040291 106 EKLDCFIADGYMAW--SMEVAKKMNVRGALFW 135 (160)
Q Consensus 106 ~~~d~vI~D~~~~~--~~~~A~~lgiP~i~~~ 135 (160)
-+||+||....... ...--++.|||++.+.
T Consensus 58 l~PDlIi~~~~~~~~~~~~~L~~~gipvv~~~ 89 (255)
T 3md9_A 58 MKPTMLLVSELAQPSLVLTQIASSGVNVVTVP 89 (255)
T ss_dssp TCCSEEEEETTCSCHHHHHHHHHTTCEEEEEC
T ss_pred cCCCEEEEcCCcCchhHHHHHHHcCCcEEEeC
Confidence 48999998765432 2333467899999885
No 298
>3kcq_A Phosphoribosylglycinamide formyltransferase; structural genomics, niaid, seattle structural center for infectious disease, ssgcid; 2.20A {Anaplasma phagocytophilum} SCOP: c.65.1.0
Probab=46.64 E-value=26 Score=24.53 Aligned_cols=45 Identities=18% Similarity=0.298 Sum_probs=29.4
Q ss_pred HHHHHHHHHhcCC-CCCccEEEecCCCccHHHHHHHhCCccEEEcc
Q 040291 92 KLEELIEDINSRE-DEKLDCFIADGYMAWSMEVAKKMNVRGALFWP 136 (160)
Q Consensus 92 ~~~~ll~~l~~~~-~~~~d~vI~D~~~~~~~~~A~~lgiP~i~~~~ 136 (160)
.++++++.+.+.. .....+||+|.--..+...|+++|||+..+.+
T Consensus 21 nl~all~~~~~~~~~~~I~~Vis~~~~a~~l~~A~~~gIp~~~~~~ 66 (215)
T 3kcq_A 21 NLEALAKAFSTEESSVVISCVISNNAEARGLLIAQSYGIPTFVVKR 66 (215)
T ss_dssp HHHHHHHHTCCC-CSEEEEEEEESCTTCTHHHHHHHTTCCEEECCB
T ss_pred HHHHHHHHHHcCCCCcEEEEEEeCCcchHHHHHHHHcCCCEEEeCc
Confidence 3556666653311 02467788876444567899999999998754
No 299
>3eul_A Possible nitrate/nitrite response transcriptional regulatory protein NARL (DNA-binding...; central beta strand flanked by alpha helices; 1.90A {Mycobacterium tuberculosis}
Probab=46.64 E-value=30 Score=21.58 Aligned_cols=42 Identities=21% Similarity=0.092 Sum_probs=25.3
Q ss_pred HHHHHHHHhcCCCCCccEEEecCCCcc--HHHHHHHh-----CCccEEEccc
Q 040291 93 LEELIEDINSREDEKLDCFIADGYMAW--SMEVAKKM-----NVRGALFWPS 137 (160)
Q Consensus 93 ~~~ll~~l~~~~~~~~d~vI~D~~~~~--~~~~A~~l-----giP~i~~~~~ 137 (160)
.++.++.+.+ .+||+||.|...+. +..+.+++ ++|.+.+...
T Consensus 50 ~~~a~~~l~~---~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~ 98 (152)
T 3eul_A 50 GAAALELIKA---HLPDVALLDYRMPGMDGAQVAAAVRSYELPTRVLLISAH 98 (152)
T ss_dssp HHHHHHHHHH---HCCSEEEEETTCSSSCHHHHHHHHHHTTCSCEEEEEESC
T ss_pred HHHHHHHHHh---cCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCeEEEEEcc
Confidence 4455555543 47999999986643 44444333 4777776553
No 300
>2ab0_A YAJL; DJ-1/THIJ superfamily, alpha-beta hydrolase fold, unknown function; 1.10A {Escherichia coli} SCOP: c.23.16.2
Probab=46.62 E-value=62 Score=21.89 Aligned_cols=39 Identities=21% Similarity=0.228 Sum_probs=28.7
Q ss_pred CCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCCCC
Q 040291 3 RPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYD 42 (160)
Q Consensus 3 ~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~~ 42 (160)
.++|+++-+++.. ..-+......|.+.|++|++++....
T Consensus 2 ~~kV~ill~~g~~-~~e~~~~~~~l~~ag~~v~~vs~~~~ 40 (205)
T 2ab0_A 2 SASALVCLAPGSE-ETEAVTTIDLLVRGGIKVTTASVASD 40 (205)
T ss_dssp CCEEEEEECTTCC-HHHHHHHHHHHHHTTCEEEEEECSST
T ss_pred CcEEEEEEcCCCc-HHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 3578888877663 44555666788889999999988653
No 301
>3hdg_A Uncharacterized protein; two-component sensor activity, response regulator, PSI-II, 11227F, NYSGXRC, structural genomics; 2.27A {Wolinella succinogenes} SCOP: c.23.1.0
Probab=46.59 E-value=31 Score=20.94 Aligned_cols=32 Identities=16% Similarity=0.112 Sum_probs=19.7
Q ss_pred CCccEEEecCCCcc--HHHHHHHh-----CCccEEEccc
Q 040291 106 EKLDCFIADGYMAW--SMEVAKKM-----NVRGALFWPS 137 (160)
Q Consensus 106 ~~~d~vI~D~~~~~--~~~~A~~l-----giP~i~~~~~ 137 (160)
.+||+||.|...+. +..+.+++ ++|.+.+...
T Consensus 50 ~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~ 88 (137)
T 3hdg_A 50 HAPDVIITDIRMPKLGGLEMLDRIKAGGAKPYVIVISAF 88 (137)
T ss_dssp HCCSEEEECSSCSSSCHHHHHHHHHHTTCCCEEEECCCC
T ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCcEEEEecC
Confidence 47899999986643 44444332 4676665443
No 302
>1jzt_A Hypothetical 27.5 kDa protein in SPX19-GCR2 inter region; yeast hypothetical protein, structural genomics, selenomethi PSI; 1.94A {Saccharomyces cerevisiae} SCOP: c.104.1.1
Probab=46.30 E-value=15 Score=26.32 Aligned_cols=34 Identities=24% Similarity=0.347 Sum_probs=26.2
Q ss_pred CeEEEEcCCCC--CChHHHHHHHHHHHhCCCEEEEEeCC
Q 040291 4 PHVLVLPIPAQ--GHVIPLLEFSQCLAKQGFRVTFVNTD 40 (160)
Q Consensus 4 ~~i~~~~~p~~--GH~~P~l~la~~L~~rGh~Vt~~~~~ 40 (160)
.+|++++.++- |+ -+.+||.|+++|++|+++...
T Consensus 59 ~~v~VlcG~GNNGGD---Glv~AR~L~~~G~~V~v~~~~ 94 (246)
T 1jzt_A 59 KHVFVIAGPGNNGGD---GLVCARHLKLFGYNPVVFYPK 94 (246)
T ss_dssp CEEEEEECSSHHHHH---HHHHHHHHHHTTCCEEEECCC
T ss_pred CeEEEEECCCCCHHH---HHHHHHHHHHCCCeEEEEEcC
Confidence 57888886653 33 378999999999999998653
No 303
>3i12_A D-alanine-D-alanine ligase A; D-alanyl-alanine synthetase A, ADP binding protein, csgid, A binding, cell shape; HET: ADP; 2.20A {Salmonella typhimurium} PDB: 3q1k_A*
Probab=46.29 E-value=16 Score=27.43 Aligned_cols=40 Identities=15% Similarity=0.186 Sum_probs=28.3
Q ss_pred CCCCeEEEEcCCCCCC----hHHHHHHHHHHHhCCCEEEEEeCC
Q 040291 1 MNRPHVLVLPIPAQGH----VIPLLEFSQCLAKQGFRVTFVNTD 40 (160)
Q Consensus 1 m~~~~i~~~~~p~~GH----~~P~l~la~~L~~rGh~Vt~~~~~ 40 (160)
|+++||+++..+..+= +..-..++++|.+.||+|+.+-..
T Consensus 1 m~~~~v~vl~GG~S~E~evSl~S~~~v~~al~~~~~~v~~i~i~ 44 (364)
T 3i12_A 1 MAKLRVGIVFGGKSAEHEVSLQSAKNIVDAIDKTRFDVVLLGID 44 (364)
T ss_dssp -CCEEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEEEEEEC
T ss_pred CCccEEEEEeccCCCCccchHHHHHHHHHHHhhcCCeEEEEEEC
Confidence 8888999887443332 244457888888899999997643
No 304
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=46.26 E-value=18 Score=27.18 Aligned_cols=32 Identities=19% Similarity=0.320 Sum_probs=24.2
Q ss_pred CCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeC
Q 040291 3 RPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNT 39 (160)
Q Consensus 3 ~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~ 39 (160)
..+|+|+-.+-.| +.+|..|+++|++|+++=-
T Consensus 26 ~~dV~IVGaG~aG-----l~~A~~L~~~G~~v~v~E~ 57 (398)
T 2xdo_A 26 DKNVAIIGGGPVG-----LTMAKLLQQNGIDVSVYER 57 (398)
T ss_dssp TCEEEEECCSHHH-----HHHHHHHHTTTCEEEEEEC
T ss_pred CCCEEEECCCHHH-----HHHHHHHHHCCCCEEEEeC
Confidence 4577777655444 6678899999999999854
No 305
>2d1p_B TUSC, hypothetical UPF0116 protein YHEM; tRNA modification, sulfur transfer, structural genomics, translation; 2.15A {Escherichia coli} SCOP: c.114.1.1
Probab=46.23 E-value=41 Score=20.79 Aligned_cols=35 Identities=9% Similarity=-0.044 Sum_probs=24.8
Q ss_pred EEcCCCCCCh--HHHHHHHHHHHhCCCEEEEEeCCCC
Q 040291 8 VLPIPAQGHV--IPLLEFSQCLAKQGFRVTFVNTDYD 42 (160)
Q Consensus 8 ~~~~p~~GH~--~P~l~la~~L~~rGh~Vt~~~~~~~ 42 (160)
++..+-.|+. .--++++.++.+.||+|+++-..+-
T Consensus 7 vv~~~P~g~~~~~~al~~a~a~~a~~~~v~vff~~DG 43 (119)
T 2d1p_B 7 VFSTAPHGTAAGREGLDALLATSALTDDLAVFFIADG 43 (119)
T ss_dssp EECSCTTTSTHHHHHHHHHHHHHTTCSCEEEEECGGG
T ss_pred EEcCCCCCcHHHHHHHHHHHHHHhCCCCEEEEEehHH
Confidence 3444444665 6667899999999999999766543
No 306
>2rk3_A Protein DJ-1; parkinson'S disease, THIJ, PFPI, chaperone, cytoplasm, disease mutation, nucleus, oncogene, oxidation, parkinson disease; 1.05A {Homo sapiens} PDB: 1pdv_A 1pdw_A 3cy6_A 1pe0_A 3cza_A 3cyf_A 2rk4_A 3cz9_A* 3ezg_A 3f71_A 3sf8_A 1p5f_A 1ps4_A 1q2u_A 1soa_A 1ucf_A 2or3_A 3bwe_A 3b38_A 3b36_A ...
Probab=46.19 E-value=64 Score=21.58 Aligned_cols=40 Identities=15% Similarity=0.186 Sum_probs=28.5
Q ss_pred CCCCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCCC
Q 040291 1 MNRPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDY 41 (160)
Q Consensus 1 m~~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~ 41 (160)
|...+|+++-+++... .-+......|.+.|++|++++...
T Consensus 1 mm~~~v~ill~~g~~~-~e~~~~~~~l~~ag~~v~~vs~~~ 40 (197)
T 2rk3_A 1 MASKRALVILAKGAEE-METVIPVDVMRRAGIKVTVAGLAG 40 (197)
T ss_dssp -CCCEEEEEECTTCCH-HHHHHHHHHHHHTTCEEEEEETTC
T ss_pred CCCCEEEEEECCCCcH-HHHHHHHHHHHHCCCEEEEEEcCC
Confidence 4467888888776543 344556677888899999998764
No 307
>1kgs_A DRRD, DNA binding response regulator D; DNA-binding protein, ALPH-beta sandwich, winged-helix, helix helix, DNA binding protein; HET: DNA MSE; 1.50A {Thermotoga maritima} SCOP: a.4.6.1 c.23.1.1 PDB: 3nnn_A*
Probab=46.18 E-value=39 Score=22.68 Aligned_cols=33 Identities=27% Similarity=0.261 Sum_probs=21.9
Q ss_pred CCccEEEecCCCcc--HHHHHHHh-----CCccEEEccch
Q 040291 106 EKLDCFIADGYMAW--SMEVAKKM-----NVRGALFWPSS 138 (160)
Q Consensus 106 ~~~d~vI~D~~~~~--~~~~A~~l-----giP~i~~~~~~ 138 (160)
.+||+||.|...+. +..+.+++ ++|.+.+....
T Consensus 45 ~~~dlvllD~~l~~~~g~~~~~~lr~~~~~~~ii~ls~~~ 84 (225)
T 1kgs_A 45 EPFDVVILDIMLPVHDGWEILKSMRESGVNTPVLMLTALS 84 (225)
T ss_dssp SCCSEEEEESCCSSSCHHHHHHHHHHTTCCCCEEEEESSC
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCCEEEEeCCC
Confidence 57999999987643 44444333 68888776544
No 308
>1byi_A Dethiobiotin synthase; biotin synthesis, cyclo-ligase, ligase; 0.97A {Escherichia coli} SCOP: c.37.1.10 PDB: 1bs1_A* 1a82_A 1dad_A* 1dae_A* 1daf_A* 1dag_A* 1dah_A* 1dai_A* 1dak_A* 1dam_A* 1dbs_A 1dts_A
Probab=46.06 E-value=66 Score=21.67 Aligned_cols=32 Identities=16% Similarity=0.156 Sum_probs=26.9
Q ss_pred EEEEc-CCCCCChHHHHHHHHHHHhCCCEEEEE
Q 040291 6 VLVLP-IPAQGHVIPLLEFSQCLAKQGFRVTFV 37 (160)
Q Consensus 6 i~~~~-~p~~GH~~P~l~la~~L~~rGh~Vt~~ 37 (160)
|++.. -++.|=..-...||..|+++|++|-++
T Consensus 4 I~v~s~kgGvGKTt~a~nLa~~la~~G~rVll~ 36 (224)
T 1byi_A 4 YFVTGTDTEVGKTVASCALLQAAKAAGYRTAGY 36 (224)
T ss_dssp EEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEE
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEE
Confidence 44444 367899999999999999999999986
No 309
>3hzh_A Chemotaxis response regulator (CHEY-3); phosphatase, complex, response regulator, receiver domain, two-component signal transduction; HET: BFD; 1.96A {Borrelia burgdorferi}
Probab=46.02 E-value=32 Score=21.68 Aligned_cols=44 Identities=14% Similarity=0.077 Sum_probs=26.1
Q ss_pred HHHHHHHHhcCCCCCccEEEecCCCcc--HHHHHHHh-----CCccEEEccc
Q 040291 93 LEELIEDINSREDEKLDCFIADGYMAW--SMEVAKKM-----NVRGALFWPS 137 (160)
Q Consensus 93 ~~~ll~~l~~~~~~~~d~vI~D~~~~~--~~~~A~~l-----giP~i~~~~~ 137 (160)
.++.++.+.+.. .+||+||.|..... +..+.+++ ++|.+.+...
T Consensus 70 ~~~al~~l~~~~-~~~dliilD~~l~~~~g~~~~~~lr~~~~~~~ii~ls~~ 120 (157)
T 3hzh_A 70 GEEAVIKYKNHY-PNIDIVTLXITMPKMDGITCLSNIMEFDKNARVIMISAL 120 (157)
T ss_dssp HHHHHHHHHHHG-GGCCEEEECSSCSSSCHHHHHHHHHHHCTTCCEEEEESC
T ss_pred HHHHHHHHHhcC-CCCCEEEEeccCCCccHHHHHHHHHhhCCCCcEEEEecc
Confidence 455555554311 27899999987643 44444433 5787776554
No 310
>3h1g_A Chemotaxis protein CHEY homolog; sulfate-bound CHEY, cytoplasm, flagellar rotatio magnesium, metal-binding, phosphoprotein; 1.70A {Helicobacter pylori} SCOP: c.23.1.1 PDB: 3gwg_A 3h1e_A 3h1f_A
Probab=45.99 E-value=47 Score=19.94 Aligned_cols=32 Identities=16% Similarity=0.213 Sum_probs=21.4
Q ss_pred CCccEEEecCCCcc--HHHHHHHh-------CCccEEEccc
Q 040291 106 EKLDCFIADGYMAW--SMEVAKKM-------NVRGALFWPS 137 (160)
Q Consensus 106 ~~~d~vI~D~~~~~--~~~~A~~l-------giP~i~~~~~ 137 (160)
.++|+||.|...+. +..+++++ ++|.+.+...
T Consensus 50 ~~~dlvi~D~~~p~~~g~~~~~~lr~~~~~~~~pii~~s~~ 90 (129)
T 3h1g_A 50 ADTKVLITDWNMPEMNGLDLVKKVRSDSRFKEIPIIMITAE 90 (129)
T ss_dssp TTCCEEEECSCCSSSCHHHHHHHHHTSTTCTTCCEEEEESC
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCCCeEEEEeCC
Confidence 36899999987754 45555433 4677776654
No 311
>3auf_A Glycinamide ribonucleotide transformylase 1; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; 2.07A {Symbiobacterium toebii}
Probab=45.96 E-value=32 Score=24.23 Aligned_cols=31 Identities=23% Similarity=0.349 Sum_probs=23.1
Q ss_pred CccEEEecCCCccHHHHHHHhCCccEEEccc
Q 040291 107 KLDCFIADGYMAWSMEVAKKMNVRGALFWPS 137 (160)
Q Consensus 107 ~~d~vI~D~~~~~~~~~A~~lgiP~i~~~~~ 137 (160)
...+||++.--..+...|+++|||+..+.+.
T Consensus 51 ~I~~Vvt~~~~~~~~~~A~~~gIp~~~~~~~ 81 (229)
T 3auf_A 51 RVAVVISDRADAYGLERARRAGVDALHMDPA 81 (229)
T ss_dssp EEEEEEESSTTCHHHHHHHHTTCEEEECCGG
T ss_pred eEEEEEcCCCchHHHHHHHHcCCCEEEECcc
Confidence 3567888854445678899999999987653
No 312
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=45.92 E-value=13 Score=29.44 Aligned_cols=35 Identities=14% Similarity=0.284 Sum_probs=26.5
Q ss_pred CCCCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCC
Q 040291 1 MNRPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTD 40 (160)
Q Consensus 1 m~~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~ 40 (160)
|.+++|.++-.+..| ..+|+.|+++||+|+++...
T Consensus 2 ~~~~kIgiIGlG~MG-----~~lA~~L~~~G~~V~v~dr~ 36 (484)
T 4gwg_A 2 NAQADIALIGLAVMG-----QNLILNMNDHGFVVCAFNRT 36 (484)
T ss_dssp -CCBSEEEECCSHHH-----HHHHHHHHHTTCCEEEECSS
T ss_pred CCCCEEEEEChhHHH-----HHHHHHHHHCCCEEEEEeCC
Confidence 556788888766655 46799999999999987543
No 313
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=45.92 E-value=12 Score=27.46 Aligned_cols=36 Identities=19% Similarity=0.315 Sum_probs=26.0
Q ss_pred CCCCeEEEEcCCCCCChHHHHHHHHHHHhCCC-EEEEEeCCC
Q 040291 1 MNRPHVLVLPIPAQGHVIPLLEFSQCLAKQGF-RVTFVNTDY 41 (160)
Q Consensus 1 m~~~~i~~~~~p~~GH~~P~l~la~~L~~rGh-~Vt~~~~~~ 41 (160)
|++.+|+++-.+..| +..|..|+++|+ +|+++-...
T Consensus 2 m~~~~vvIIGaG~aG-----l~aA~~l~~~g~~~v~lie~~~ 38 (369)
T 3d1c_A 2 MQHHKVAIIGAGAAG-----IGMAITLKDFGITDVIILEKGT 38 (369)
T ss_dssp CCEEEEEEECCSHHH-----HHHHHHHHHTTCCCEEEECSSS
T ss_pred CccCcEEEECcCHHH-----HHHHHHHHHcCCCcEEEEecCC
Confidence 555677777654333 567888899999 999986543
No 314
>4hn9_A Iron complex transport system substrate-binding P; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.85A {Eubacterium eligens}
Probab=45.81 E-value=17 Score=26.76 Aligned_cols=32 Identities=6% Similarity=0.151 Sum_probs=21.0
Q ss_pred CCccEEEecCCCccHHHHHHHhCCccEEEccc
Q 040291 106 EKLDCFIADGYMAWSMEVAKKMNVRGALFWPS 137 (160)
Q Consensus 106 ~~~d~vI~D~~~~~~~~~A~~lgiP~i~~~~~ 137 (160)
-+||+||..........--++.|||++.+...
T Consensus 115 l~PDLIi~~~~~~~~~~~L~~~gipvv~~~~~ 146 (335)
T 4hn9_A 115 ATPDVVFLPMKLKKTADTLESLGIKAVVVNPE 146 (335)
T ss_dssp TCCSEEEEEGGGHHHHHHHHHTTCCEEEECCC
T ss_pred cCCCEEEEeCcchhHHHHHHHcCCCEEEEcCC
Confidence 48999997643222233336779999998654
No 315
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=45.79 E-value=18 Score=26.63 Aligned_cols=32 Identities=6% Similarity=0.082 Sum_probs=25.4
Q ss_pred CeEEEEcCCCCCChHHHHHHHHHHHhCC-CEEEEEeCC
Q 040291 4 PHVLVLPIPAQGHVIPLLEFSQCLAKQG-FRVTFVNTD 40 (160)
Q Consensus 4 ~~i~~~~~p~~GH~~P~l~la~~L~~rG-h~Vt~~~~~ 40 (160)
++|.++-.+..| ..+++.|+++| |+|+++...
T Consensus 25 m~IgvIG~G~mG-----~~lA~~L~~~G~~~V~~~dr~ 57 (317)
T 4ezb_A 25 TTIAFIGFGEAA-----QSIAGGLGGRNAARLAAYDLR 57 (317)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHTTTCSEEEEECGG
T ss_pred CeEEEECccHHH-----HHHHHHHHHcCCCeEEEEeCC
Confidence 578888766555 67899999999 999987654
No 316
>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}
Probab=45.77 E-value=31 Score=24.61 Aligned_cols=33 Identities=9% Similarity=0.139 Sum_probs=23.2
Q ss_pred eEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCC
Q 040291 5 HVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTD 40 (160)
Q Consensus 5 ~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~ 40 (160)
+.++++..+. -+ =..++++|+++|++|+++.-.
T Consensus 22 k~vlVTGas~-gI--G~aia~~La~~G~~V~~~~r~ 54 (272)
T 2nwq_A 22 STLFITGATS-GF--GEACARRFAEAGWSLVLTGRR 54 (272)
T ss_dssp CEEEESSTTT-SS--HHHHHHHHHHTTCEEEEEESC
T ss_pred cEEEEeCCCC-HH--HHHHHHHHHHCCCEEEEEECC
Confidence 5666764443 33 257899999999999987543
No 317
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=45.68 E-value=38 Score=24.00 Aligned_cols=33 Identities=15% Similarity=0.062 Sum_probs=24.1
Q ss_pred CeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeC
Q 040291 4 PHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNT 39 (160)
Q Consensus 4 ~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~ 39 (160)
.+.++++.++.| -=..++++|+++|++|.++.-
T Consensus 30 ~k~vlVTGas~G---IG~aia~~l~~~G~~Vi~~~r 62 (281)
T 3ppi_A 30 GASAIVSGGAGG---LGEATVRRLHADGLGVVIADL 62 (281)
T ss_dssp TEEEEEETTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCCh---HHHHHHHHHHHCCCEEEEEeC
Confidence 467777755544 235789999999999987654
No 318
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=45.59 E-value=29 Score=21.76 Aligned_cols=33 Identities=15% Similarity=0.108 Sum_probs=20.7
Q ss_pred CCccEEEecCCCcc--HHHHHHHh-----CCccEEEccch
Q 040291 106 EKLDCFIADGYMAW--SMEVAKKM-----NVRGALFWPSS 138 (160)
Q Consensus 106 ~~~d~vI~D~~~~~--~~~~A~~l-----giP~i~~~~~~ 138 (160)
.+||+||.|..... +..+.+++ ++|++.+....
T Consensus 46 ~~~dliild~~l~~~~g~~~~~~l~~~~~~~pii~ls~~~ 85 (155)
T 1qkk_A 46 DFAGIVISDIRMPGMDGLALFRKILALDPDLPMILVTGHG 85 (155)
T ss_dssp TCCSEEEEESCCSSSCHHHHHHHHHHHCTTSCEEEEECGG
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHhhCCCCCEEEEECCC
Confidence 46899999976542 44443332 57888775543
No 319
>3kwp_A Predicted methyltransferase; putative methyltransferase, MCSG, STRU genomics, PSI-2, protein structure initiative; 2.29A {Lactobacillus brevis atcc 367}
Probab=45.43 E-value=34 Score=25.11 Aligned_cols=41 Identities=7% Similarity=-0.076 Sum_probs=33.3
Q ss_pred CCeEEEEc-CCCCCChHHHHHHHHHHHhCCCEEEEEeCCCCh
Q 040291 3 RPHVLVLP-IPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDH 43 (160)
Q Consensus 3 ~~~i~~~~-~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~~~ 43 (160)
..+|++++ .+-++=..|...+.+++.++|.+|+++-..+..
T Consensus 88 G~~Va~lsdaGdP~i~~~g~~lv~~~~~~gi~v~viPGiSA~ 129 (296)
T 3kwp_A 88 GMQIAQVSDAGMPSISDPGHELVNACIDAHIPVVPLPGANAG 129 (296)
T ss_dssp TCEEEEECSSBCTTSSHHHHHHHHHHHHTTCCEEECCCCCHH
T ss_pred CceEEEeccCCCCCCCCCchHHHHHHHHcCCCeeeCCCcccc
Confidence 35788887 788888899999999999999999887766543
No 320
>2gkg_A Response regulator homolog; social motility, receiver domain, signalling, high resolutio signaling protein; 1.00A {Myxococcus xanthus} PDB: 2i6f_A 2nt4_A 2nt3_A
Probab=45.34 E-value=34 Score=20.17 Aligned_cols=29 Identities=14% Similarity=0.113 Sum_probs=18.7
Q ss_pred CCccEEEecCCCc---cHHHHHHH-------hCCccEEE
Q 040291 106 EKLDCFIADGYMA---WSMEVAKK-------MNVRGALF 134 (160)
Q Consensus 106 ~~~d~vI~D~~~~---~~~~~A~~-------lgiP~i~~ 134 (160)
.+||+||.|.-.. .+..+.++ -++|++.+
T Consensus 48 ~~~dlvi~d~~~~~~~~g~~~~~~l~~~~~~~~~~ii~~ 86 (127)
T 2gkg_A 48 DRPDLVVLAVDLSAGQNGYLICGKLKKDDDLKNVPIVII 86 (127)
T ss_dssp HCCSEEEEESBCGGGCBHHHHHHHHHHSTTTTTSCEEEE
T ss_pred cCCCEEEEeCCCCCCCCHHHHHHHHhcCccccCCCEEEE
Confidence 4689999998655 23333322 36788877
No 321
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=45.29 E-value=13 Score=27.25 Aligned_cols=33 Identities=6% Similarity=0.045 Sum_probs=25.0
Q ss_pred CCeEEEEcCCCCCChHHHHHHHHHHHhCCC-EEEEEeCC
Q 040291 3 RPHVLVLPIPAQGHVIPLLEFSQCLAKQGF-RVTFVNTD 40 (160)
Q Consensus 3 ~~~i~~~~~p~~GH~~P~l~la~~L~~rGh-~Vt~~~~~ 40 (160)
.++|.++-.+..| ..+++.|+++|| +|+++...
T Consensus 24 ~~~I~iIG~G~mG-----~~~A~~L~~~G~~~V~~~dr~ 57 (312)
T 3qsg_A 24 AMKLGFIGFGEAA-----SAIASGLRQAGAIDMAAYDAA 57 (312)
T ss_dssp -CEEEEECCSHHH-----HHHHHHHHHHSCCEEEEECSS
T ss_pred CCEEEEECccHHH-----HHHHHHHHHCCCCeEEEEcCC
Confidence 4678888665555 478999999999 99987663
No 322
>2zki_A 199AA long hypothetical Trp repressor binding protein; alpha/beta structure, transcription; 2.90A {Sulfolobus tokodaii}
Probab=45.25 E-value=32 Score=22.95 Aligned_cols=38 Identities=21% Similarity=0.348 Sum_probs=26.4
Q ss_pred CCeEEEEcCCCCCChHHHHH-HHHHHHhCCCEEEEEeCCC
Q 040291 3 RPHVLVLPIPAQGHVIPLLE-FSQCLAKQGFRVTFVNTDY 41 (160)
Q Consensus 3 ~~~i~~~~~p~~GH~~P~l~-la~~L~~rGh~Vt~~~~~~ 41 (160)
.++|+++-.. .|+..-+.+ +++.|.+.|++|.++.-..
T Consensus 4 mmkilii~~S-~g~T~~la~~i~~~l~~~g~~v~~~~l~~ 42 (199)
T 2zki_A 4 KPNILVLFYG-YGSIVELAKEIGKGAEEAGAEVKIRRVRE 42 (199)
T ss_dssp CCEEEEEECC-SSHHHHHHHHHHHHHHHHSCEEEEEECCC
T ss_pred CcEEEEEEeC-ccHHHHHHHHHHHHHHhCCCEEEEEehhH
Confidence 4688888777 887654443 4555666799999886544
No 323
>2q7x_A UPF0052 protein SP_1565; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, transferase; HET: MLY MSE; 2.00A {Streptococcus pneumoniae}
Probab=45.22 E-value=50 Score=24.69 Aligned_cols=36 Identities=17% Similarity=0.193 Sum_probs=27.3
Q ss_pred CCCCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCCC
Q 040291 1 MNRPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDY 41 (160)
Q Consensus 1 m~~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~ 41 (160)
|.++||+++. +|.| .-.+.+.|.+.++++|.+.+..
T Consensus 2 ~~~~~IV~ig-GGtG----l~~ll~gLk~~~~~iTaIVtva 37 (326)
T 2q7x_A 2 MRXPXITVIG-GGTG----SPVILXSLREXDVEIAAIVTVA 37 (326)
T ss_dssp CCCCEEEEEC-CCTT----HHHHHHHHHHSSCEEEEEECCB
T ss_pred CCCCeEEEEc-Cccc----HHHHHHHhccCCCCeEEEEECc
Confidence 6778998887 4444 3467788888899999987754
No 324
>1wek_A Hypothetical protein TT1465; rossman fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 2.20A {Thermus thermophilus} SCOP: c.129.1.1
Probab=45.21 E-value=29 Score=24.29 Aligned_cols=33 Identities=27% Similarity=0.304 Sum_probs=25.2
Q ss_pred CeEEEEcCCCCC----ChHHHHHHHHHHHhCCCEEEE
Q 040291 4 PHVLVLPIPAQG----HVIPLLEFSQCLAKQGFRVTF 36 (160)
Q Consensus 4 ~~i~~~~~p~~G----H~~P~l~la~~L~~rGh~Vt~ 36 (160)
+.|.++.....| +..-..+|++.|+++|+.|..
T Consensus 38 ~~VaV~Gss~~~~~~~~~~~A~~lg~~La~~g~~lVs 74 (217)
T 1wek_A 38 PLVSVFGSARFGEGHPAYEAGYRLGRALAEAGFGVVT 74 (217)
T ss_dssp CEEEEECCSSCCTTSHHHHHHHHHHHHHHHHTCEEEE
T ss_pred CEEEEEeCCCCCCCcHHHHHHHHHHHHHHHCCCEEEe
Confidence 568888876665 456788889999999977665
No 325
>1ys7_A Transcriptional regulatory protein PRRA; response regulator, DNA binding domain, phosphorylation; 1.58A {Mycobacterium tuberculosis} SCOP: a.4.6.1 c.23.1.1 PDB: 1ys6_A
Probab=44.88 E-value=41 Score=22.71 Aligned_cols=31 Identities=16% Similarity=0.229 Sum_probs=20.6
Q ss_pred CCccEEEecCCCcc--HHHHHHHh-----CCccEEEcc
Q 040291 106 EKLDCFIADGYMAW--SMEVAKKM-----NVRGALFWP 136 (160)
Q Consensus 106 ~~~d~vI~D~~~~~--~~~~A~~l-----giP~i~~~~ 136 (160)
.+||+||.|...+. +..+.+++ ++|++.+..
T Consensus 50 ~~~dlvllD~~l~~~~g~~~~~~l~~~~~~~~ii~lt~ 87 (233)
T 1ys7_A 50 NRPDAIVLDINMPVLDGVSVVTALRAMDNDVPVCVLSA 87 (233)
T ss_dssp SCCSEEEEESSCSSSCHHHHHHHHHHTTCCCCEEEEEC
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCCEEEEEc
Confidence 57899999987643 44444333 678887654
No 326
>2w36_A Endonuclease V; hypoxanthine, endonuclease, endonucleasev, hydrolase, inosine, DNA damage, DNA repair; HET: BRU; 2.10A {Thermotoga maritima} PDB: 2w35_A 3hd0_A
Probab=44.74 E-value=24 Score=24.95 Aligned_cols=31 Identities=16% Similarity=0.057 Sum_probs=21.5
Q ss_pred CCccEEEecCCCcc---HHHHH----HHhCCccEEEcc
Q 040291 106 EKLDCFIADGYMAW---SMEVA----KKMNVRGALFWP 136 (160)
Q Consensus 106 ~~~d~vI~D~~~~~---~~~~A----~~lgiP~i~~~~ 136 (160)
.+||+++.|-.... ...+| -.+|+|.|.+.=
T Consensus 102 ~~PdlllvDG~Gi~HpR~~GlA~HlGv~l~~PtIGVAK 139 (225)
T 2w36_A 102 TKPDVVVFDGQGLAHPRKLGIASHMGLFIEIPTIGVAK 139 (225)
T ss_dssp SCCSEEEEESCSSSSTTSCCHHHHHHHHHTSCEEEEES
T ss_pred CCCCEEEEeCeEEEcCCCCCchhhhhhhhCCCEEEEEe
Confidence 47999999986543 33444 445899998653
No 327
>2fx5_A Lipase; alpha-beta hydrolase; HET: TLA; 1.80A {Pseudomonas mendocina}
Probab=44.73 E-value=24 Score=24.37 Aligned_cols=36 Identities=17% Similarity=0.118 Sum_probs=28.9
Q ss_pred eEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCC
Q 040291 5 HVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTD 40 (160)
Q Consensus 5 ~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~ 40 (160)
.++++-.++.|+..-+..+++.|+++|+.|..+-..
T Consensus 50 p~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~d~~ 85 (258)
T 2fx5_A 50 PVILWGNGTGAGPSTYAGLLSHWASHGFVVAAAETS 85 (258)
T ss_dssp EEEEEECCTTCCGGGGHHHHHHHHHHTCEEEEECCS
T ss_pred eEEEEECCCCCCchhHHHHHHHHHhCCeEEEEecCC
Confidence 456666677788888899999999999998877553
No 328
>3eq2_A Probable two-component response regulator; adaptor sigmas, signaling protein; 3.40A {Pseudomonas aeruginosa} PDB: 3f7a_A
Probab=44.68 E-value=31 Score=25.86 Aligned_cols=41 Identities=17% Similarity=0.170 Sum_probs=24.7
Q ss_pred HHHHHHHhcCCCCCccEEEecCCCcc--HHHHHHHh-----CCccEEEccc
Q 040291 94 EELIEDINSREDEKLDCFIADGYMAW--SMEVAKKM-----NVRGALFWPS 137 (160)
Q Consensus 94 ~~ll~~l~~~~~~~~d~vI~D~~~~~--~~~~A~~l-----giP~i~~~~~ 137 (160)
++.++.+.+ .+||+||.|..++. +..+++++ ++|.|.+...
T Consensus 39 ~~al~~~~~---~~~dlvllD~~mp~~~G~~~~~~lr~~~~~~pii~lt~~ 86 (394)
T 3eq2_A 39 LQGLQIFES---EQPDLVICDLRMPQIDGLELIRRIRQTASETPIIVLSGA 86 (394)
T ss_dssp HHHHHHHHH---SCCSEEEECCCSSSSCTHHHHHHHHHTTCCCCEEEC---
T ss_pred HHHHHHHhh---CCCCEEEEcCCCCCCCHHHHHHHHHhhCCCCcEEEEEcC
Confidence 334444433 57999999998764 45555544 5788776654
No 329
>3dm5_A SRP54, signal recognition 54 kDa protein; protein-RNA, signal recognition particle, SRP-GTPase, protein targeting, cytoplasm, GTP-binding; HET: GDP; 2.51A {Pyrococcus furiosus}
Probab=44.63 E-value=35 Score=26.74 Aligned_cols=40 Identities=20% Similarity=0.389 Sum_probs=34.5
Q ss_pred eEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCCCChh
Q 040291 5 HVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHK 44 (160)
Q Consensus 5 ~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~~~~ 44 (160)
.|+++-.++.|=..-...||..|+++|++|.++..+.+..
T Consensus 102 vIlivG~~G~GKTTt~~kLA~~l~~~G~kVllv~~D~~R~ 141 (443)
T 3dm5_A 102 ILLMVGIQGSGKTTTVAKLARYFQKRGYKVGVVCSDTWRP 141 (443)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHHHTTTCCEEEEECCCSST
T ss_pred EEEEECcCCCCHHHHHHHHHHHHHHCCCeEEEEeCCCcch
Confidence 4666778889999999999999999999999999876643
No 330
>3iz6_A 40S ribosomal protein SA (S2P); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=44.62 E-value=19 Score=26.72 Aligned_cols=30 Identities=13% Similarity=0.079 Sum_probs=22.4
Q ss_pred CccEEE-ecCCCc-cHHHHHHHhCCccEEEcc
Q 040291 107 KLDCFI-ADGYMA-WSMEVAKKMNVRGALFWP 136 (160)
Q Consensus 107 ~~d~vI-~D~~~~-~~~~~A~~lgiP~i~~~~ 136 (160)
.||+|| .|+-.- -+..-|.++|||.|.+.-
T Consensus 122 ePdllvV~Dp~~d~qAI~EA~~lnIPtIALvD 153 (305)
T 3iz6_A 122 EPRLLILTDPRTDHQPIKESALGNIPTIAFCD 153 (305)
T ss_dssp CCSEEEESCTTTTHHHHHHHHHHTCCEEEEEC
T ss_pred CCceeEEeCcccchHHHHHHHHcCCCEEEEEc
Confidence 578655 888664 356679999999998753
No 331
>2qjw_A Uncharacterized protein XCC1541; putative hydrolase of the alpha/beta superfamily, structural genomics; HET: MSE TLA P6G; 1.35A {Xanthomonas campestris PV}
Probab=44.52 E-value=43 Score=21.11 Aligned_cols=36 Identities=11% Similarity=0.087 Sum_probs=23.2
Q ss_pred CCCCeEEEEcCCCCCChH--HHHHHHHHHHhCCCEEEEE
Q 040291 1 MNRPHVLVLPIPAQGHVI--PLLEFSQCLAKQGFRVTFV 37 (160)
Q Consensus 1 m~~~~i~~~~~p~~GH~~--P~l~la~~L~~rGh~Vt~~ 37 (160)
|.++.|+++...+ |... -+..+++.|+++|+.|..+
T Consensus 2 ~~~~~vv~~HG~~-~~~~~~~~~~~~~~l~~~g~~v~~~ 39 (176)
T 2qjw_A 2 MSRGHCILAHGFE-SGPDALKVTALAEVAERLGWTHERP 39 (176)
T ss_dssp CSSCEEEEECCTT-CCTTSHHHHHHHHHHHHTTCEEECC
T ss_pred CCCcEEEEEeCCC-CCccHHHHHHHHHHHHHCCCEEEEe
Confidence 3455566666333 4333 4568999999999877543
No 332
>3d3k_A Enhancer of mRNA-decapping protein 3; HEDC3, phosphoprotein, protein binding; 2.20A {Homo sapiens}
Probab=44.48 E-value=17 Score=26.16 Aligned_cols=34 Identities=21% Similarity=0.270 Sum_probs=26.1
Q ss_pred CeEEEEcCCCC--CChHHHHHHHHHHHhCCCEEEEEeCC
Q 040291 4 PHVLVLPIPAQ--GHVIPLLEFSQCLAKQGFRVTFVNTD 40 (160)
Q Consensus 4 ~~i~~~~~p~~--GH~~P~l~la~~L~~rGh~Vt~~~~~ 40 (160)
.+|++++.++- |+ -+.+||.|+++|++|+++...
T Consensus 86 ~~vlVlcG~GNNGGD---Glv~AR~L~~~G~~V~v~~~~ 121 (259)
T 3d3k_A 86 PTVALLCGPHVKGAQ---GISCGRHLANHDVQVILFLPN 121 (259)
T ss_dssp CEEEEEECSSHHHHH---HHHHHHHHHHTTCEEEEECCB
T ss_pred CeEEEEECCCCCHHH---HHHHHHHHHHCCCeEEEEEec
Confidence 47888886553 33 378999999999999998653
No 333
>1ep3_B Dihydroorotate dehydrogenase B (PYRK subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: b.43.4.2 c.25.1.3 PDB: 1ep1_B* 1ep2_B*
Probab=44.33 E-value=24 Score=24.99 Aligned_cols=36 Identities=28% Similarity=0.406 Sum_probs=26.9
Q ss_pred CeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCCC
Q 040291 4 PHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDY 41 (160)
Q Consensus 4 ~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~ 41 (160)
.+++++. ++.| +.|++.+.++|.++|.+|+++-...
T Consensus 111 ~~~llia-gGtG-itP~~s~l~~l~~~~~~v~l~~~~r 146 (262)
T 1ep3_B 111 DKILIIG-GGIG-VPPLYELAKQLEKTGCQMTILLGFA 146 (262)
T ss_dssp SEEEEEE-EGGG-SHHHHHHHHHHHHHTCEEEEEEEES
T ss_pred CeEEEEE-CcCc-HHHHHHHHHHHHHcCCeEEEEEEcC
Confidence 4566655 3444 8999999999998888898876543
No 334
>2ts1_A Tyrosyl-tRNA synthetase; ligase (synthetase); 2.30A {Geobacillus stearothermophilus} SCOP: c.26.1.1 PDB: 3ts1_A* 1tyd_E* 1tya_E* 1tyc_A 1tyb_E* 4ts1_A* 1jh3_A
Probab=44.28 E-value=22 Score=27.60 Aligned_cols=33 Identities=18% Similarity=0.267 Sum_probs=24.4
Q ss_pred EEEcCCC---CCChHHHHHHHHHHHhCCCEEEEEeCC
Q 040291 7 LVLPIPA---QGHVIPLLEFSQCLAKQGFRVTFVNTD 40 (160)
Q Consensus 7 ~~~~~p~---~GH~~P~l~la~~L~~rGh~Vt~~~~~ 40 (160)
.+=|++- -||+.|++.+ +.|.+.||++.++...
T Consensus 36 G~dPTg~sLHlGh~v~l~~l-~~lQ~~G~~~i~lIgd 71 (419)
T 2ts1_A 36 GFDPTADSLHIGHLATILTM-RRFQQAGHRPIALVGG 71 (419)
T ss_dssp EECCSSSSCBGGGHHHHHHH-HHHHHTTCEEEEEECT
T ss_pred eeCCCCCCccHHHHHHHHHH-HHHHHCCCcEEEEEcC
Confidence 3445543 3999986655 6899999999998754
No 335
>2j48_A Two-component sensor kinase; pseudo-receiver, circadian clock, transferase, response regulator, histidine protein kinase; NMR {Synechococcus elongatus}
Probab=44.19 E-value=39 Score=19.44 Aligned_cols=32 Identities=6% Similarity=-0.158 Sum_probs=19.8
Q ss_pred CCccEEEecCCCcc--HHHHHHH-------hCCccEEEccc
Q 040291 106 EKLDCFIADGYMAW--SMEVAKK-------MNVRGALFWPS 137 (160)
Q Consensus 106 ~~~d~vI~D~~~~~--~~~~A~~-------lgiP~i~~~~~ 137 (160)
.+||++|.|..... +..+.++ -++|.+.+...
T Consensus 44 ~~~dlii~d~~~~~~~~~~~~~~l~~~~~~~~~~ii~~~~~ 84 (119)
T 2j48_A 44 LQPIVILMAWPPPDQSCLLLLQHLREHQADPHPPLVLFLGE 84 (119)
T ss_dssp HCCSEEEEECSTTCCTHHHHHHHHHHTCCCSSCCCEEEESS
T ss_pred cCCCEEEEecCCCCCCHHHHHHHHHhccccCCCCEEEEeCC
Confidence 46899999976542 3333322 35788877543
No 336
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=44.18 E-value=30 Score=25.60 Aligned_cols=32 Identities=9% Similarity=-0.062 Sum_probs=26.4
Q ss_pred CccEEEecCCCccH--HHHHHHhCCccEEEccch
Q 040291 107 KLDCFIADGYMAWS--MEVAKKMNVRGALFWPSS 138 (160)
Q Consensus 107 ~~d~vI~D~~~~~~--~~~A~~lgiP~i~~~~~~ 138 (160)
+++-+|.|+|+..+ ..+|.++|..+|.+-..+
T Consensus 241 ~~~~~vlDpF~GsGtt~~aa~~~~r~~ig~e~~~ 274 (319)
T 1eg2_A 241 HPGSTVLDFFAGSGVTARVAIQEGRNSICTDAAP 274 (319)
T ss_dssp CTTCEEEETTCTTCHHHHHHHHHTCEEEEEESST
T ss_pred CCCCEEEecCCCCCHHHHHHHHcCCcEEEEECCc
Confidence 45778999999654 678899999999988776
No 337
>2o8n_A APOA-I binding protein; rossmann fold, protein binding; 2.00A {Mus musculus} PDB: 2dg2_A
Probab=44.11 E-value=20 Score=25.99 Aligned_cols=34 Identities=29% Similarity=0.385 Sum_probs=26.3
Q ss_pred CeEEEEcCCCC--CChHHHHHHHHHHHhCCCEEEEEeCC
Q 040291 4 PHVLVLPIPAQ--GHVIPLLEFSQCLAKQGFRVTFVNTD 40 (160)
Q Consensus 4 ~~i~~~~~p~~--GH~~P~l~la~~L~~rGh~Vt~~~~~ 40 (160)
.+|++++.++- |+ -+.+||.|+++|++|+++...
T Consensus 80 ~~VlVlcG~GNNGGD---Glv~AR~L~~~G~~V~V~~~~ 115 (265)
T 2o8n_A 80 PTVLVICGPGNNGGD---GLVCARHLKLFGYQPTIYYPK 115 (265)
T ss_dssp CEEEEEECSSHHHHH---HHHHHHHHHHTTCEEEEECCS
T ss_pred CeEEEEECCCCCHHH---HHHHHHHHHHCCCcEEEEEeC
Confidence 47888886653 33 378999999999999998654
No 338
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=44.09 E-value=25 Score=25.32 Aligned_cols=32 Identities=13% Similarity=0.264 Sum_probs=25.1
Q ss_pred CeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCC
Q 040291 4 PHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTD 40 (160)
Q Consensus 4 ~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~ 40 (160)
++|.++-.+..|. .+++.|+++||+|+++...
T Consensus 4 ~~I~iiG~G~mG~-----~~a~~l~~~G~~V~~~d~~ 35 (302)
T 2h78_A 4 KQIAFIGLGHMGA-----PMATNLLKAGYLLNVFDLV 35 (302)
T ss_dssp CEEEEECCSTTHH-----HHHHHHHHTTCEEEEECSS
T ss_pred CEEEEEeecHHHH-----HHHHHHHhCCCeEEEEcCC
Confidence 5788887666663 6789999999999988543
No 339
>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*
Probab=44.07 E-value=40 Score=24.05 Aligned_cols=34 Identities=12% Similarity=0.074 Sum_probs=26.3
Q ss_pred CCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeC
Q 040291 3 RPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNT 39 (160)
Q Consensus 3 ~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~ 39 (160)
+.|+++++-.+.| ==..+|++|+++|++|.+..-
T Consensus 10 ~GK~alVTGas~G---IG~aia~~la~~Ga~V~~~~r 43 (261)
T 4h15_A 10 RGKRALITAGTKG---AGAATVSLFLELGAQVLTTAR 43 (261)
T ss_dssp TTCEEEESCCSSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEeccCcH---HHHHHHHHHHHcCCEEEEEEC
Confidence 4588999977664 236789999999999988654
No 340
>2fuk_A XC6422 protein; A/B hydrolase, structural genomics, X-RAY diffraction; 1.60A {Xanthomonas campestris} SCOP: c.69.1.36
Probab=44.06 E-value=56 Score=21.42 Aligned_cols=27 Identities=19% Similarity=0.110 Sum_probs=20.0
Q ss_pred CCCChHHHHHHHHHHHhCCCEEEEEeC
Q 040291 13 AQGHVIPLLEFSQCLAKQGFRVTFVNT 39 (160)
Q Consensus 13 ~~GH~~P~l~la~~L~~rGh~Vt~~~~ 39 (160)
+.+.-..+..+++.|+++|+.|..+--
T Consensus 51 ~~~~~~~~~~~~~~l~~~g~~v~~~d~ 77 (220)
T 2fuk_A 51 GSMHNKVVTMAARALRELGITVVRFNF 77 (220)
T ss_dssp CSTTCHHHHHHHHHHHTTTCEEEEECC
T ss_pred CcccchHHHHHHHHHHHCCCeEEEEec
Confidence 333445578999999999998877554
No 341
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=44.03 E-value=45 Score=23.40 Aligned_cols=33 Identities=15% Similarity=0.172 Sum_probs=24.2
Q ss_pred CeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeC
Q 040291 4 PHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNT 39 (160)
Q Consensus 4 ~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~ 39 (160)
.++++++..+.| + =..++++|+++|++|.++.-
T Consensus 11 ~k~vlVTGas~g-I--G~aia~~l~~~G~~V~~~~r 43 (264)
T 3ucx_A 11 DKVVVISGVGPA-L--GTTLARRCAEQGADLVLAAR 43 (264)
T ss_dssp TCEEEEESCCTT-H--HHHHHHHHHHTTCEEEEEES
T ss_pred CcEEEEECCCcH-H--HHHHHHHHHHCcCEEEEEeC
Confidence 467777755543 2 36789999999999988654
No 342
>3i42_A Response regulator receiver domain protein (CHEY- like); structural genomics, PSI-2, protein structure initiative; 2.15A {Methylobacillus flagellatus KT} SCOP: c.23.1.0
Probab=43.86 E-value=47 Score=19.75 Aligned_cols=36 Identities=19% Similarity=0.332 Sum_probs=25.0
Q ss_pred CCCCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCC
Q 040291 1 MNRPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTD 40 (160)
Q Consensus 1 m~~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~ 40 (160)
|.+.+|+++- .+-.-...+.+.|.+.|++|+.+.+.
T Consensus 1 M~~~~ilivd----d~~~~~~~l~~~L~~~g~~v~~~~~~ 36 (127)
T 3i42_A 1 MSLQQALIVE----DYQAAAETFKELLEMLGFQADYVMSG 36 (127)
T ss_dssp -CCEEEEEEC----SCHHHHHHHHHHHHHTTEEEEEESSH
T ss_pred CCcceEEEEc----CCHHHHHHHHHHHHHcCCCEEEECCH
Confidence 6677888774 45555667777888889988876543
No 343
>3n0r_A Response regulator; sigma factor, receiver, two-component SI transduction, signaling protein; HET: MSE GOL; 1.25A {Caulobacter vibrioides} PDB: 3t0y_A
Probab=43.61 E-value=41 Score=24.22 Aligned_cols=41 Identities=17% Similarity=0.165 Sum_probs=26.4
Q ss_pred HHHHHHHhcCCCCCccEEEecCCCc-c--H----HHHHHHhCCccEEEccc
Q 040291 94 EELIEDINSREDEKLDCFIADGYMA-W--S----MEVAKKMNVRGALFWPS 137 (160)
Q Consensus 94 ~~ll~~l~~~~~~~~d~vI~D~~~~-~--~----~~~A~~lgiP~i~~~~~ 137 (160)
++.++.+.. .+||+||.|..++ . + ..+-+..++|.|.+...
T Consensus 195 ~eAl~~~~~---~~~dlvl~D~~MPd~mdG~e~~~~ir~~~~~piI~lT~~ 242 (286)
T 3n0r_A 195 GEALEAVTR---RTPGLVLADIQLADGSSGIDAVKDILGRMDVPVIFITAF 242 (286)
T ss_dssp HHHHHHHHH---CCCSEEEEESCCTTSCCTTTTTHHHHHHTTCCEEEEESC
T ss_pred HHHHHHHHh---CCCCEEEEcCCCCCCCCHHHHHHHHHhcCCCCEEEEeCC
Confidence 344444443 5799999999877 3 2 23333338998887664
No 344
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=43.59 E-value=41 Score=23.53 Aligned_cols=34 Identities=21% Similarity=0.264 Sum_probs=23.9
Q ss_pred CeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCC
Q 040291 4 PHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTD 40 (160)
Q Consensus 4 ~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~ 40 (160)
.++++++..+.| -=..++++|+++|++|.++.-.
T Consensus 6 ~k~vlVTGas~g---IG~aia~~l~~~G~~V~~~~r~ 39 (257)
T 3imf_A 6 EKVVIITGGSSG---MGKGMATRFAKEGARVVITGRT 39 (257)
T ss_dssp TCEEEETTTTSH---HHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCCH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 456677755443 2367899999999999886543
No 345
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=43.57 E-value=23 Score=25.40 Aligned_cols=32 Identities=22% Similarity=0.260 Sum_probs=23.2
Q ss_pred CeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCC
Q 040291 4 PHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTD 40 (160)
Q Consensus 4 ~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~ 40 (160)
++|.++-.+..| ..+++.|+++||+|+++...
T Consensus 2 ~~i~iIG~G~mG-----~~~a~~l~~~G~~V~~~dr~ 33 (287)
T 3pef_A 2 QKFGFIGLGIMG-----SAMAKNLVKAGCSVTIWNRS 33 (287)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSS
T ss_pred CEEEEEeecHHH-----HHHHHHHHHCCCeEEEEcCC
Confidence 467777554444 45789999999999987554
No 346
>1y42_X Tyrosyl-tRNA synthetase, mitochondrial; CYT-18, tRNA ligase, group I intron; HET: TYR; 1.95A {Neurospora crassa} PDB: 2rkj_A
Probab=43.46 E-value=18 Score=27.89 Aligned_cols=33 Identities=18% Similarity=0.391 Sum_probs=24.2
Q ss_pred EEEcCCC---CCChHHHHHHHHHHHhCCCEEEEEeCC
Q 040291 7 LVLPIPA---QGHVIPLLEFSQCLAKQGFRVTFVNTD 40 (160)
Q Consensus 7 ~~~~~p~---~GH~~P~l~la~~L~~rGh~Vt~~~~~ 40 (160)
++=|++- -||+.|++.+ +.|.+.||++.++...
T Consensus 70 G~dPTg~sLHlGhlv~l~~l-~~lQ~~G~~~~~lIgD 105 (392)
T 1y42_X 70 GIDPTAPSLHVGHLLPLMPL-FWMYLEGYKAFTLIGG 105 (392)
T ss_dssp EECCCSSSCBGGGHHHHHHH-HHHHHHTCEEEEEECT
T ss_pred eecCCCCCccHHHHHHHHHH-HHHHHcCCcEEEEEcC
Confidence 3445544 3999987665 5888889999998754
No 347
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=43.42 E-value=26 Score=25.01 Aligned_cols=34 Identities=24% Similarity=0.317 Sum_probs=22.9
Q ss_pred CeEEEEcCCCCCChHHHHHHHHHHHhCC-CEEEEEeCCC
Q 040291 4 PHVLVLPIPAQGHVIPLLEFSQCLAKQG-FRVTFVNTDY 41 (160)
Q Consensus 4 ~~i~~~~~p~~GH~~P~l~la~~L~~rG-h~Vt~~~~~~ 41 (160)
++|+++ ++.|.+ =..++++|.++| |+|+.++-..
T Consensus 6 ~~ilVt--GatG~i--G~~l~~~L~~~g~~~V~~~~R~~ 40 (299)
T 2wm3_A 6 KLVVVF--GGTGAQ--GGSVARTLLEDGTFKVRVVTRNP 40 (299)
T ss_dssp CEEEEE--TTTSHH--HHHHHHHHHHHCSSEEEEEESCT
T ss_pred CEEEEE--CCCchH--HHHHHHHHHhcCCceEEEEEcCC
Confidence 444443 455544 356788999999 9999987543
No 348
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=43.38 E-value=6.6 Score=28.57 Aligned_cols=33 Identities=15% Similarity=0.105 Sum_probs=25.1
Q ss_pred CCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCC
Q 040291 3 RPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTD 40 (160)
Q Consensus 3 ~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~ 40 (160)
+++|+++-.++.|- .++..|++.||+|+++...
T Consensus 2 ~mkI~iiGaGa~G~-----~~a~~L~~~g~~V~~~~r~ 34 (294)
T 3g17_A 2 SLSVAIIGPGAVGT-----TIAYELQQSLPHTTLIGRH 34 (294)
T ss_dssp -CCEEEECCSHHHH-----HHHHHHHHHCTTCEEEESS
T ss_pred CcEEEEECCCHHHH-----HHHHHHHHCCCeEEEEEec
Confidence 46788886666663 5788899999999998765
No 349
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=43.23 E-value=15 Score=26.78 Aligned_cols=30 Identities=30% Similarity=0.240 Sum_probs=22.6
Q ss_pred eEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeC
Q 040291 5 HVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNT 39 (160)
Q Consensus 5 ~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~ 39 (160)
+|+++-.+..| ..+++.|+++||+|+++..
T Consensus 2 ~I~iiG~G~mG-----~~~a~~L~~~g~~V~~~~r 31 (335)
T 1txg_A 2 IVSILGAGAMG-----SALSVPLVDNGNEVRIWGT 31 (335)
T ss_dssp EEEEESCCHHH-----HHHHHHHHHHCCEEEEECC
T ss_pred EEEEECcCHHH-----HHHHHHHHhCCCeEEEEEc
Confidence 67777555445 3568899999999999865
No 350
>3e5n_A D-alanine-D-alanine ligase A; bacterial blight; 2.00A {Xanthomonas oryzae PV} PDB: 3r5f_A* 3rfc_A*
Probab=43.18 E-value=19 Score=27.38 Aligned_cols=40 Identities=15% Similarity=0.119 Sum_probs=27.9
Q ss_pred CCCCeEEEEcCCCCCCh----HHHHHHHHHHHhCCCEEEEEeCC
Q 040291 1 MNRPHVLVLPIPAQGHV----IPLLEFSQCLAKQGFRVTFVNTD 40 (160)
Q Consensus 1 m~~~~i~~~~~p~~GH~----~P~l~la~~L~~rGh~Vt~~~~~ 40 (160)
|+++||+++..+..+=- ..-..++++|.+.|++|+.+-..
T Consensus 20 m~~~~v~vl~GG~S~E~evSl~Sa~~v~~al~~~~~~v~~i~i~ 63 (386)
T 3e5n_A 20 MRKIRVGLIFGGKSAEHEVSLQSARNILDALDPQRFEPVLIGID 63 (386)
T ss_dssp -CCEEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEEEEEEC
T ss_pred cCCceEEEEeccCCCCchhHHHHHHHHHHHhCccCCEEEEEEEC
Confidence 77888988874433322 44457888888899999997644
No 351
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=43.18 E-value=41 Score=23.53 Aligned_cols=34 Identities=15% Similarity=0.059 Sum_probs=24.5
Q ss_pred CeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCC
Q 040291 4 PHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTD 40 (160)
Q Consensus 4 ~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~ 40 (160)
.++++++.++.| -=..++++|+++|++|.++.-.
T Consensus 7 ~k~vlVTGas~G---IG~aia~~l~~~G~~V~~~~r~ 40 (252)
T 3h7a_A 7 NATVAVIGAGDY---IGAEIAKKFAAEGFTVFAGRRN 40 (252)
T ss_dssp SCEEEEECCSSH---HHHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEECCCch---HHHHHHHHHHHCCCEEEEEeCC
Confidence 467777755542 2368899999999999887653
No 352
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=43.14 E-value=18 Score=27.26 Aligned_cols=30 Identities=23% Similarity=0.283 Sum_probs=21.7
Q ss_pred eEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeC
Q 040291 5 HVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNT 39 (160)
Q Consensus 5 ~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~ 39 (160)
+|+|+-.+..| +..|..|+++|++|+++=-
T Consensus 2 dVvVIGaGiaG-----LsaA~~La~~G~~V~vlE~ 31 (425)
T 3ka7_A 2 KTVVIGAGLGG-----LLSAARLSKAGHEVEVFER 31 (425)
T ss_dssp EEEEECCBHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred cEEEECCCHHH-----HHHHHHHHhCCCceEEEeC
Confidence 45555544444 6678899999999999843
No 353
>2g36_A Tryptophanyl-tRNA synthetase; TM0492, structural genomics, joint center for struc genomics, JCSG, protein structure initiative, PSI, ligase; HET: TRP; 2.50A {Thermotoga maritima}
Probab=43.11 E-value=12 Score=28.15 Aligned_cols=33 Identities=24% Similarity=0.316 Sum_probs=26.0
Q ss_pred EEcCCCC--CChHHHHHHHHHHHhCCCEEEEEeCC
Q 040291 8 VLPIPAQ--GHVIPLLEFSQCLAKQGFRVTFVNTD 40 (160)
Q Consensus 8 ~~~~p~~--GH~~P~l~la~~L~~rGh~Vt~~~~~ 40 (160)
+-|++.. ||+.|.+.-...|++.||++.++..+
T Consensus 19 ~~PTG~lHLGn~~g~l~~~~~lQ~~G~~~~~~IaD 53 (340)
T 2g36_A 19 MRPTGKLHIGHLVGALENWVKLQEEGNECFYFVAD 53 (340)
T ss_dssp ECCCSSCBHHHHHTHHHHHHHHHHTTCEEEEEECH
T ss_pred eCCCCcccHHhHHHHHHHHHHHHHCCCCEEEEEec
Confidence 4444432 88888888888999999999998865
No 354
>3da8_A Probable 5'-phosphoribosylglycinamide formyltransferase PURN; glycinamide ribonucleotide transformylase, structure; 1.30A {Mycobacterium tuberculosis} PDB: 3dcj_A*
Probab=43.09 E-value=29 Score=24.31 Aligned_cols=28 Identities=14% Similarity=0.030 Sum_probs=21.9
Q ss_pred CccEEEecCCCccHHHHHHHhCCccEEEc
Q 040291 107 KLDCFIADGYMAWSMEVAKKMNVRGALFW 135 (160)
Q Consensus 107 ~~d~vI~D~~~~~~~~~A~~lgiP~i~~~ 135 (160)
...+||++.- ..+...|+++|||+..+.
T Consensus 40 eI~~Vis~~~-a~~~~~A~~~gIp~~~~~ 67 (215)
T 3da8_A 40 RVVAVGVDRE-CRAAEIAAEASVPVFTVR 67 (215)
T ss_dssp EEEEEEESSC-CHHHHHHHHTTCCEEECC
T ss_pred eEEEEEeCCc-hHHHHHHHHcCCCEEEeC
Confidence 4667888875 335678999999999984
No 355
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=43.04 E-value=35 Score=26.92 Aligned_cols=35 Identities=17% Similarity=0.142 Sum_probs=27.8
Q ss_pred CCeEEEEcCCCCCChHHHHHHHHHHHhC-CC-EEEEEeCCCC
Q 040291 3 RPHVLVLPIPAQGHVIPLLEFSQCLAKQ-GF-RVTFVNTDYD 42 (160)
Q Consensus 3 ~~~i~~~~~p~~GH~~P~l~la~~L~~r-Gh-~Vt~~~~~~~ 42 (160)
.++|.++-.+..| ..+|..|+++ || +|+.+-....
T Consensus 18 ~mkIaVIGlG~mG-----~~lA~~la~~~G~~~V~~~D~~~~ 54 (478)
T 3g79_A 18 IKKIGVLGMGYVG-----IPAAVLFADAPCFEKVLGFQRNSK 54 (478)
T ss_dssp CCEEEEECCSTTH-----HHHHHHHHHSTTCCEEEEECCCCT
T ss_pred CCEEEEECcCHHH-----HHHHHHHHHhCCCCeEEEEECChh
Confidence 4688888777777 5789999999 99 9999865543
No 356
>2o1e_A YCDH; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.60A {Bacillus subtilis}
Probab=43.00 E-value=32 Score=25.35 Aligned_cols=43 Identities=7% Similarity=0.084 Sum_probs=32.4
Q ss_pred HHHHHHHHHhcCCCCCccEEEecCCCcc--HHHHHHHhCCccEEEccc
Q 040291 92 KLEELIEDINSREDEKLDCFIADGYMAW--SMEVAKKMNVRGALFWPS 137 (160)
Q Consensus 92 ~~~~ll~~l~~~~~~~~d~vI~D~~~~~--~~~~A~~lgiP~i~~~~~ 137 (160)
.+.++.+.+++ .+..||+++..... +..+|++.|++.+.+.+.
T Consensus 227 ~l~~l~~~ik~---~~v~~If~e~~~~~~~~~~ia~e~g~~v~~l~~l 271 (312)
T 2o1e_A 227 SLAKLKTYAKE---HNVKVIYFEEIASSKVADTLASEIGAKTEVLNTL 271 (312)
T ss_dssp HHHHHHHHTTS---SCCCEEECSSCCCHHHHHHHHHHTCCEEECCCCT
T ss_pred HHHHHHHHHHH---cCCCEEEEeCCCChHHHHHHHHHhCCcEEEeccc
Confidence 45666666554 57899999998764 467999999999887543
No 357
>1weh_A Conserved hypothetical protein TT1887; rossman fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.129.1.1
Probab=42.94 E-value=35 Score=22.78 Aligned_cols=32 Identities=16% Similarity=0.279 Sum_probs=23.7
Q ss_pred eEEEEcCCCCC----ChHHHHHHHHHHHhCCCEEEE
Q 040291 5 HVLVLPIPAQG----HVIPLLEFSQCLAKQGFRVTF 36 (160)
Q Consensus 5 ~i~~~~~p~~G----H~~P~l~la~~L~~rGh~Vt~ 36 (160)
.|.++.....| +..-..+|++.|+++|+.|..
T Consensus 3 ~V~V~gs~~~~~~~~~~~~A~~lg~~La~~g~~lV~ 38 (171)
T 1weh_A 3 LLAVFVSSRLSPEDPLYARWVRYGEVLAEEGFGLAC 38 (171)
T ss_dssp EEEEECCSSCCTTSHHHHHHHHHHHHHHHTTEEEEE
T ss_pred EEEEEeCCCCCCCcHHHHHHHHHHHHHHHCCCEEEe
Confidence 57777766554 457788899999999866654
No 358
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=42.88 E-value=66 Score=23.64 Aligned_cols=36 Identities=14% Similarity=-0.004 Sum_probs=28.2
Q ss_pred CccEEEecCCCccH--HHHHHHhCCccEEEccchHHHH
Q 040291 107 KLDCFIADGYMAWS--MEVAKKMNVRGALFWPSSAASV 142 (160)
Q Consensus 107 ~~d~vI~D~~~~~~--~~~A~~lgiP~i~~~~~~~~~~ 142 (160)
+++-+|.|+|+..+ ..+|.++|..+|.+-..+....
T Consensus 251 ~~~~~VlDpF~GsGtt~~aa~~~gr~~ig~e~~~~~~~ 288 (323)
T 1boo_A 251 EPDDLVVDIFGGSNTTGLVAERESRKWISFEMKPEYVA 288 (323)
T ss_dssp CTTCEEEETTCTTCHHHHHHHHTTCEEEEEESCHHHHH
T ss_pred CCCCEEEECCCCCCHHHHHHHHcCCCEEEEeCCHHHHH
Confidence 55778999999654 6789999999999877665543
No 359
>3cx3_A Lipoprotein; zinc-binding, transport, lipid binding protein, metal binding protein; 2.40A {Streptococcus pneumoniae}
Probab=42.88 E-value=31 Score=24.96 Aligned_cols=43 Identities=16% Similarity=0.183 Sum_probs=33.0
Q ss_pred HHHHHHHHHHhcCCCCCccEEEecCCCcc--HHHHHHHhCCccEEEcc
Q 040291 91 GKLEELIEDINSREDEKLDCFIADGYMAW--SMEVAKKMNVRGALFWP 136 (160)
Q Consensus 91 ~~~~~ll~~l~~~~~~~~d~vI~D~~~~~--~~~~A~~lgiP~i~~~~ 136 (160)
..+.++.+.+++ .+..||+++..... +..+|++.|++.+.+.+
T Consensus 213 ~~l~~l~~~ik~---~~v~~if~e~~~~~~~~~~ia~~~g~~v~~l~~ 257 (284)
T 3cx3_A 213 RQLTEIQEFVKT---YKVKTIFTESNASSKVAETLVKSTGVGLKTLNP 257 (284)
T ss_dssp HHHHHHHHHHHH---TTCCCEEECSSSCCHHHHHHHSSSSCCEEECCC
T ss_pred HHHHHHHHHHHH---cCCCEEEEeCCCCcHHHHHHHHHcCCeEEEecC
Confidence 346666666665 58899999997764 46799999999988754
No 360
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=42.71 E-value=9.8 Score=28.34 Aligned_cols=35 Identities=23% Similarity=0.276 Sum_probs=24.3
Q ss_pred CCCCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCC
Q 040291 1 MNRPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTD 40 (160)
Q Consensus 1 m~~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~ 40 (160)
|+...|+|+-.+..| +.+|..|+++|++|+++--.
T Consensus 2 m~~~dVvIvG~G~aG-----l~~A~~La~~G~~V~l~E~~ 36 (397)
T 3cgv_A 2 METYDVLVVGGGPGG-----STAARYAAKYGLKTLMIEKR 36 (397)
T ss_dssp EEEEEEEEECCSHHH-----HHHHHHHHHTTCCEEEECSS
T ss_pred CccCCEEEECcCHHH-----HHHHHHHHHCCCCEEEEeCC
Confidence 444566666544434 56788999999999998544
No 361
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=42.70 E-value=23 Score=23.97 Aligned_cols=32 Identities=19% Similarity=0.222 Sum_probs=22.0
Q ss_pred eEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCC
Q 040291 5 HVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTD 40 (160)
Q Consensus 5 ~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~ 40 (160)
+|+++- +.|.+- ..+++.|+++||+|+++...
T Consensus 2 ~i~iiG--a~G~~G--~~ia~~l~~~g~~V~~~~r~ 33 (212)
T 1jay_A 2 RVALLG--GTGNLG--KGLALRLATLGHEIVVGSRR 33 (212)
T ss_dssp EEEEET--TTSHHH--HHHHHHHHTTTCEEEEEESS
T ss_pred eEEEEc--CCCHHH--HHHHHHHHHCCCEEEEEeCC
Confidence 566663 234332 46789999999999987653
No 362
>1byi_A Dethiobiotin synthase; biotin synthesis, cyclo-ligase, ligase; 0.97A {Escherichia coli} SCOP: c.37.1.10 PDB: 1bs1_A* 1a82_A 1dad_A* 1dae_A* 1daf_A* 1dag_A* 1dah_A* 1dai_A* 1dak_A* 1dam_A* 1dbs_A 1dts_A
Probab=42.67 E-value=33 Score=23.24 Aligned_cols=44 Identities=7% Similarity=0.012 Sum_probs=30.1
Q ss_pred HHHHHHHHHHhcCCCCCccEEEecCCCc---------cHHHHHHHhCCccEEEccch
Q 040291 91 GKLEELIEDINSREDEKLDCFIADGYMA---------WSMEVAKKMNVRGALFWPSS 138 (160)
Q Consensus 91 ~~~~~ll~~l~~~~~~~~d~vI~D~~~~---------~~~~~A~~lgiP~i~~~~~~ 138 (160)
..+++.++.+. .++|.||.|.--. ....++..++.|.+......
T Consensus 96 ~~l~~~l~~l~----~~yD~viID~p~~l~~p~~~~~~~~~l~~~~~~~vi~v~~~~ 148 (224)
T 1byi_A 96 LVMSAGLRALE----QQADWVLVEGAGGWFTPLSDTFTFADWVTQEQLPVILVVGVK 148 (224)
T ss_dssp HHHHHHHHHHH----TTCSEEEEECSSSTTCEEETTEEHHHHHHHHTCCEEEEEECS
T ss_pred HHHHHHHHHHH----HhCCEEEEEcCCccccCCCcchhHHHHHHHhCCCEEEEecCC
Confidence 34556666654 4799999998621 24678888888877766543
No 363
>3r0j_A Possible two component system response transcript positive regulator PHOP; beta-alpha fold, winged helix-turn-helix; 2.50A {Mycobacterium tuberculosis}
Probab=42.62 E-value=36 Score=23.52 Aligned_cols=42 Identities=12% Similarity=0.234 Sum_probs=26.2
Q ss_pred HHHHHHHhcCCCCCccEEEecCCCcc--HHHHHHHh-----CCccEEEccch
Q 040291 94 EELIEDINSREDEKLDCFIADGYMAW--SMEVAKKM-----NVRGALFWPSS 138 (160)
Q Consensus 94 ~~ll~~l~~~~~~~~d~vI~D~~~~~--~~~~A~~l-----giP~i~~~~~~ 138 (160)
++.++.+.. .+||+||.|...+. +..+++++ ++|.+.+....
T Consensus 57 ~~al~~~~~---~~~dlvllD~~lp~~~g~~~~~~lr~~~~~~~ii~lt~~~ 105 (250)
T 3r0j_A 57 AQALDRARE---TRPDAVILDVXMPGMDGFGVLRRLRADGIDAPALFLTARD 105 (250)
T ss_dssp HHHHHHHHH---HCCSEEEEESCCSSSCHHHHHHHHHHTTCCCCEEEEECST
T ss_pred HHHHHHHHh---CCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCCEEEEECCC
Confidence 444444433 47999999987654 45554433 57888776543
No 364
>4dlp_A Aminoacyl-tRNA synthetase, class I:aminoacyl-tRNA synthetase, class IA:methionyl-tRNA...; structural genomics; 2.65A {Brucella melitensis biovar abortus 230ORGANISM_TAXID}
Probab=42.44 E-value=32 Score=27.36 Aligned_cols=27 Identities=22% Similarity=0.407 Sum_probs=21.0
Q ss_pred CChHHHHH---HHHHHHhCCCEEEEEeCCC
Q 040291 15 GHVIPLLE---FSQCLAKQGFRVTFVNTDY 41 (160)
Q Consensus 15 GH~~P~l~---la~~L~~rGh~Vt~~~~~~ 41 (160)
||...++. ++|.|..+|++|.++..-+
T Consensus 43 GH~r~~v~~D~laR~lr~~G~~V~~~~g~d 72 (536)
T 4dlp_A 43 GHAYELIATDAMARFQRLNGMDVYFLTGTD 72 (536)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCEEEEEEEEC
T ss_pred chhHHHHHHHHHHHHHHhcCCcEEEecCcC
Confidence 78766554 7888889999999986543
No 365
>3n53_A Response regulator receiver modulated diguanylate; diguanylate cyclase, protein structure I II(PSI II), NYSGXRC, structural genomics; 2.20A {Pelobacter carbinolicus} SCOP: c.23.1.0
Probab=42.33 E-value=25 Score=21.58 Aligned_cols=32 Identities=25% Similarity=0.195 Sum_probs=18.3
Q ss_pred CCccEEEecCCCcc--HHHHH----HH---hCCccEEEccc
Q 040291 106 EKLDCFIADGYMAW--SMEVA----KK---MNVRGALFWPS 137 (160)
Q Consensus 106 ~~~d~vI~D~~~~~--~~~~A----~~---lgiP~i~~~~~ 137 (160)
.+||+||.|...+. +..+. +. -++|.+.+...
T Consensus 45 ~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~ 85 (140)
T 3n53_A 45 HHPDLVILDMDIIGENSPNLCLKLKRSKGLKNVPLILLFSS 85 (140)
T ss_dssp HCCSEEEEETTC------CHHHHHHTSTTCTTCCEEEEECC
T ss_pred CCCCEEEEeCCCCCCcHHHHHHHHHcCcccCCCCEEEEecC
Confidence 47899999986643 22222 22 35777776554
No 366
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=42.31 E-value=36 Score=24.14 Aligned_cols=36 Identities=17% Similarity=-0.005 Sum_probs=27.4
Q ss_pred CccEEEecCCCccH--HHHHHHhCCccEEEccchHHHH
Q 040291 107 KLDCFIADGYMAWS--MEVAKKMNVRGALFWPSSAASV 142 (160)
Q Consensus 107 ~~d~vI~D~~~~~~--~~~A~~lgiP~i~~~~~~~~~~ 142 (160)
+++-+|.|+|+..+ ..+|.++|..++.+-..+...-
T Consensus 211 ~~~~~vlD~f~GsGtt~~~a~~~gr~~ig~e~~~~~~~ 248 (260)
T 1g60_A 211 NPNDLVLDCFMGSGTTAIVAKKLGRNFIGCDMNAEYVN 248 (260)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHTTCEEEEEESCHHHHH
T ss_pred CCCCEEEECCCCCCHHHHHHHHcCCeEEEEeCCHHHHH
Confidence 45668999999654 6688999999999877665443
No 367
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=42.28 E-value=16 Score=26.54 Aligned_cols=33 Identities=21% Similarity=0.313 Sum_probs=23.4
Q ss_pred CCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCC
Q 040291 3 RPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTD 40 (160)
Q Consensus 3 ~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~ 40 (160)
+.+|+++-.+..| +..|..|+++|++|+++-..
T Consensus 5 ~~~vvIIG~G~aG-----l~aA~~l~~~g~~v~lie~~ 37 (335)
T 2zbw_A 5 HTDVLIVGAGPTG-----LFAGFYVGMRGLSFRFVDPL 37 (335)
T ss_dssp EEEEEEECCSHHH-----HHHHHHHHHTTCCEEEEESS
T ss_pred cCcEEEECCCHHH-----HHHHHHHHhCCCCEEEEeCC
Confidence 3567777544333 45777888999999998754
No 368
>3vis_A Esterase; alpha/beta-hydrolase fold, polyethylene terephthal hydrolase; HET: PE4; 1.76A {Thermobifida alba}
Probab=42.26 E-value=40 Score=24.08 Aligned_cols=35 Identities=17% Similarity=0.297 Sum_probs=28.4
Q ss_pred EEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCC
Q 040291 6 VLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTD 40 (160)
Q Consensus 6 i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~ 40 (160)
++++-.+..|...-+..+++.|+++|+.|..+-..
T Consensus 98 ~vv~~HG~~~~~~~~~~~~~~la~~G~~vv~~d~~ 132 (306)
T 3vis_A 98 AIAISPGYTGTQSSIAWLGERIASHGFVVIAIDTN 132 (306)
T ss_dssp EEEEECCTTCCHHHHHHHHHHHHTTTEEEEEECCS
T ss_pred EEEEeCCCcCCHHHHHHHHHHHHhCCCEEEEecCC
Confidence 55666677788888999999999999988876544
No 369
>4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii}
Probab=42.22 E-value=23 Score=27.03 Aligned_cols=25 Identities=12% Similarity=0.392 Sum_probs=22.5
Q ss_pred hHHHHHHHHHHHhCCCEEEEEeCCC
Q 040291 17 VIPLLEFSQCLAKQGFRVTFVNTDY 41 (160)
Q Consensus 17 ~~P~l~la~~L~~rGh~Vt~~~~~~ 41 (160)
.-++.+|.+.|.++|++|.+|+...
T Consensus 223 ~p~~~eLi~~L~~~G~~v~IVSgg~ 247 (385)
T 4gxt_A 223 LDEMVDLYRSLEENGIDCYIVSASF 247 (385)
T ss_dssp CHHHHHHHHHHHHTTCEEEEEEEEE
T ss_pred CHHHHHHHHHHHHCCCeEEEEcCCc
Confidence 5789999999999999999988764
No 370
>2xdq_B Light-independent protochlorophyllide reductase S; oxidoreductase, DPOR, (bacterio)chlorophyll biosynthesis, photosynthesis; 2.40A {Thermosynechococcus elongatus}
Probab=42.14 E-value=23 Score=28.13 Aligned_cols=25 Identities=12% Similarity=0.258 Sum_probs=19.9
Q ss_pred CccEEEecCCCccHHHHHHHhCCccEEE
Q 040291 107 KLDCFIADGYMAWSMEVAKKMNVRGALF 134 (160)
Q Consensus 107 ~~d~vI~D~~~~~~~~~A~~lgiP~i~~ 134 (160)
+||++|.+ .....+|+++|||.+.+
T Consensus 372 ~pDl~ig~---~~~r~~a~k~gip~~~i 396 (511)
T 2xdq_B 372 EPAAIFGT---QMERHVGKRLNIPCGVI 396 (511)
T ss_dssp CCSEEEEC---HHHHHHHHHHTCCEEEC
T ss_pred CCCEEEec---cchHHHHHhcCCCeEec
Confidence 67888866 44678899999999875
No 371
>3d3j_A Enhancer of mRNA-decapping protein 3; HEDC3, phosphoprotein, protein binding; 2.80A {Homo sapiens}
Probab=42.04 E-value=20 Score=26.58 Aligned_cols=34 Identities=21% Similarity=0.270 Sum_probs=26.4
Q ss_pred CeEEEEcCCCC--CChHHHHHHHHHHHhCCCEEEEEeCC
Q 040291 4 PHVLVLPIPAQ--GHVIPLLEFSQCLAKQGFRVTFVNTD 40 (160)
Q Consensus 4 ~~i~~~~~p~~--GH~~P~l~la~~L~~rGh~Vt~~~~~ 40 (160)
.+|++++.++- |+ -+.+||.|+++|++|+++...
T Consensus 133 ~~vlVlcG~GNNGGD---Glv~AR~L~~~G~~V~V~~~~ 168 (306)
T 3d3j_A 133 PTVALLCGPHVKGAQ---GISCGRHLANHDVQVILFLPN 168 (306)
T ss_dssp CEEEEEECSSHHHHH---HHHHHHHHHHTTCEEEEECCC
T ss_pred CeEEEEECCCCCHHH---HHHHHHHHHHCCCcEEEEEec
Confidence 47888886653 33 378999999999999998653
No 372
>1xfi_A Unknown protein; structural genomics, protein structure initiative, CESG, AT2G17340, center for eukaryotic structural genomics; 1.70A {Arabidopsis thaliana} SCOP: e.50.1.1 PDB: 2q40_A
Probab=42.00 E-value=27 Score=26.64 Aligned_cols=37 Identities=14% Similarity=0.356 Sum_probs=28.1
Q ss_pred CeEEEEc-CCCCCChHHHHHHHHHHHhCCCEEEEEeCC
Q 040291 4 PHVLVLP-IPAQGHVIPLLEFSQCLAKQGFRVTFVNTD 40 (160)
Q Consensus 4 ~~i~~~~-~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~ 40 (160)
.+|+++. ..|..-+.=++.|++.|.++|++|++..-.
T Consensus 213 k~Vl~v~DNAG~Eiv~D~L~La~~Ll~~g~kVvl~vK~ 250 (367)
T 1xfi_A 213 KKAVIFVDNSGADIILGILPFARELLRRGAQVVLAANE 250 (367)
T ss_dssp CEEEEECCBTTHHHHHTHHHHHHHHHHTTCEEEEEEBS
T ss_pred CEEEEEecCCCchhhccHHHHHHHHHHcCCEEEEEECC
Confidence 4677777 333356667789999999999999997643
No 373
>3trd_A Alpha/beta hydrolase; cellular processes; 1.50A {Coxiella burnetii}
Probab=41.98 E-value=68 Score=20.84 Aligned_cols=27 Identities=11% Similarity=0.134 Sum_probs=20.2
Q ss_pred CCCChHHHHHHHHHHHhCCCEEEEEeC
Q 040291 13 AQGHVIPLLEFSQCLAKQGFRVTFVNT 39 (160)
Q Consensus 13 ~~GH~~P~l~la~~L~~rGh~Vt~~~~ 39 (160)
+...-.-+..+++.|+++|+.|..+--
T Consensus 45 ~~~~~~~~~~~~~~l~~~g~~v~~~d~ 71 (208)
T 3trd_A 45 GTMNNKVVTTLAKALDELGLKTVRFNF 71 (208)
T ss_dssp CCTTCHHHHHHHHHHHHTTCEEEEECC
T ss_pred CccCCchHHHHHHHHHHCCCEEEEEec
Confidence 444455568899999999999877544
No 374
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=41.96 E-value=33 Score=26.44 Aligned_cols=29 Identities=21% Similarity=0.330 Sum_probs=0.0
Q ss_pred CeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEE
Q 040291 4 PHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFV 37 (160)
Q Consensus 4 ~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~ 37 (160)
++|.++-.+..| ..+|..|+++||+|+++
T Consensus 1 mkI~VIG~G~vG-----~~~A~~la~~G~~V~~~ 29 (436)
T 1mv8_A 1 MRISIFGLGYVG-----AVCAGCLSARGHEVIGV 29 (436)
T ss_dssp CEEEEECCSTTH-----HHHHHHHHHTTCEEEEE
T ss_pred CEEEEECCCHHH-----HHHHHHHHHCCCEEEEE
No 375
>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*
Probab=41.92 E-value=47 Score=23.20 Aligned_cols=34 Identities=24% Similarity=0.303 Sum_probs=23.8
Q ss_pred CCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeC
Q 040291 3 RPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNT 39 (160)
Q Consensus 3 ~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~ 39 (160)
+.+.++++..+.| + =..++++|+++|++|.++.-
T Consensus 3 ~~k~vlVTGas~g-I--G~~ia~~l~~~G~~V~~~~r 36 (260)
T 1x1t_A 3 KGKVAVVTGSTSG-I--GLGIATALAAQGADIVLNGF 36 (260)
T ss_dssp TTCEEEETTCSSH-H--HHHHHHHHHHTTCEEEEECC
T ss_pred CCCEEEEeCCCcH-H--HHHHHHHHHHcCCEEEEEeC
Confidence 3456677744432 2 36789999999999988654
No 376
>3aek_B Light-independent protochlorophyllide reductase S; iron/sulfur cluster, oxidoreductase, bacteriochlorophyll biosynthesis; HET: PMR; 2.30A {Rhodobacter capsulatus} PDB: 3aeq_B* 3aer_B 3aes_B* 3aeu_B 3aet_B
Probab=41.90 E-value=23 Score=28.27 Aligned_cols=26 Identities=15% Similarity=0.261 Sum_probs=20.9
Q ss_pred CCccEEEecCCCccHHHHHHHhCCccEEE
Q 040291 106 EKLDCFIADGYMAWSMEVAKKMNVRGALF 134 (160)
Q Consensus 106 ~~~d~vI~D~~~~~~~~~A~~lgiP~i~~ 134 (160)
.+||++|.+ .....+|+++|||.+.+
T Consensus 348 ~~pDL~ig~---~~~~~~a~~~giP~~~i 373 (525)
T 3aek_B 348 AAPELILGT---QMERNIAKKLGLPCAVI 373 (525)
T ss_dssp HCCSEEEEC---HHHHHHHHHHTCCEEEC
T ss_pred cCCCEEEec---chhHHHHHHcCCCEEEe
Confidence 378999976 35678999999999863
No 377
>3mm4_A Histidine kinase homolog; receiver domain, CKI1, cytokinin signaling, ROS fold, CHEY-like, transferase; 2.00A {Arabidopsis thaliana} PDB: 3mmn_A
Probab=41.87 E-value=28 Score=23.45 Aligned_cols=32 Identities=13% Similarity=0.071 Sum_probs=21.9
Q ss_pred CccEEEecCCCcc--HHHHHHH---------hCCccEEEccch
Q 040291 107 KLDCFIADGYMAW--SMEVAKK---------MNVRGALFWPSS 138 (160)
Q Consensus 107 ~~d~vI~D~~~~~--~~~~A~~---------lgiP~i~~~~~~ 138 (160)
+||+||.|..++. +..++++ .++|.|.+....
T Consensus 119 ~~dlillD~~lp~~~G~el~~~lr~~~~~~~~~~piI~ls~~~ 161 (206)
T 3mm4_A 119 PFDYIFMDCQMPEMDGYEATREIRKVEKSYGVRTPIIAVSGHD 161 (206)
T ss_dssp SCSEEEEESCCSSSCHHHHHHHHHHHHHTTTCCCCEEEEESSC
T ss_pred CCCEEEEcCCCCCCCHHHHHHHHHhhhhhcCCCCcEEEEECCC
Confidence 7999999987753 4444432 458888877643
No 378
>2d1p_A TUSD, hypothetical UPF0163 protein YHEN; tRNA modification, sulfur transfer, structural genomics, translation; 2.15A {Escherichia coli} SCOP: c.114.1.1
Probab=41.82 E-value=65 Score=20.70 Aligned_cols=38 Identities=21% Similarity=0.259 Sum_probs=25.5
Q ss_pred CeEE-EEcCCCCCChH--HHHHHHHHHHhCCCEE-EEEeCCC
Q 040291 4 PHVL-VLPIPAQGHVI--PLLEFSQCLAKQGFRV-TFVNTDY 41 (160)
Q Consensus 4 ~~i~-~~~~p~~GH~~--P~l~la~~L~~rGh~V-t~~~~~~ 41 (160)
++++ ++..|-.|+-. --+.+|+++.+.||+| +++-..+
T Consensus 13 ~~~~ivv~~~Pyg~~~a~~Al~~A~aala~g~eV~~VFf~~D 54 (140)
T 2d1p_A 13 MRFAIVVTGPAYGTQQASSAFQFAQALIADGHELSSVFFYRE 54 (140)
T ss_dssp CEEEEEECSCSSSSSHHHHHHHHHHHHHHTTCEEEEEEECGG
T ss_pred eEEEEEEcCCCCCcHHHHHHHHHHHHHHHCCCccCEEEEech
Confidence 4544 44455556554 4478899999999999 7765543
No 379
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=41.79 E-value=42 Score=23.76 Aligned_cols=33 Identities=15% Similarity=0.166 Sum_probs=24.4
Q ss_pred CeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeC
Q 040291 4 PHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNT 39 (160)
Q Consensus 4 ~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~ 39 (160)
.++++++..+.| -=..++++|+++|++|.++.-
T Consensus 10 ~k~~lVTGas~g---IG~a~a~~l~~~G~~V~~~~r 42 (281)
T 3s55_A 10 GKTALITGGARG---MGRSHAVALAEAGADIAICDR 42 (281)
T ss_dssp TCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEEC
T ss_pred CCEEEEeCCCch---HHHHHHHHHHHCCCeEEEEeC
Confidence 467777755543 235789999999999988765
No 380
>2r7a_A Bacterial heme binding protein; periplasmic binding protein, heme transport, transport protein; HET: HEM; 2.05A {Shigella dysenteriae} PDB: 2rg7_A
Probab=41.78 E-value=33 Score=23.97 Aligned_cols=30 Identities=10% Similarity=-0.039 Sum_probs=20.0
Q ss_pred CCccEEEecCCCc--cHHHHHHHhCCccEEEc
Q 040291 106 EKLDCFIADGYMA--WSMEVAKKMNVRGALFW 135 (160)
Q Consensus 106 ~~~d~vI~D~~~~--~~~~~A~~lgiP~i~~~ 135 (160)
-+||+||...... ....--++.|||++.+.
T Consensus 58 l~PDLIi~~~~~~~~~~~~~L~~~gipvv~~~ 89 (256)
T 2r7a_A 58 LRPDSVITWQDAGPQIVLDQLRAQKVNVVTLP 89 (256)
T ss_dssp TCCSEEEEETTCSCHHHHHHHHHTTCEEEEEC
T ss_pred cCCCEEEEcCCCCCHHHHHHHHHcCCcEEEec
Confidence 4899999765422 22333467899998874
No 381
>3pnx_A Putative sulfurtransferase DSRE; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; HET: MSE GOL; 1.92A {Syntrophomonas wolfei}
Probab=41.71 E-value=63 Score=21.42 Aligned_cols=46 Identities=11% Similarity=0.132 Sum_probs=34.4
Q ss_pred CCCCeEEEEcCCCC-CChHHHHHHHHHHHhCCCEEEEEeCCCChhhH
Q 040291 1 MNRPHVLVLPIPAQ-GHVIPLLEFSQCLAKQGFRVTFVNTDYDHKRI 46 (160)
Q Consensus 1 m~~~~i~~~~~p~~-GH~~P~l~la~~L~~rGh~Vt~~~~~~~~~~~ 46 (160)
|++.++.++-+-+. =-..|-+-+|..-++.|++|+++-|..-...+
T Consensus 2 m~~~kl~II~~sG~~dka~~a~ilA~~AaA~G~eV~iFfTf~Gl~~l 48 (160)
T 3pnx_A 2 MENKKMNLLLFSGDYDKALASLIIANAAREMEIEVTIFCAFWGLLLL 48 (160)
T ss_dssp CTTCEEEEEECCCCHHHHHHHHHHHHHHHHTTCEEEEEECGGGGGGG
T ss_pred CCCCcEEEEEecCCHHHHHHHHHHHHHHHHcCCCEEEEEeehhHHHh
Confidence 66677776664443 44588888999999999999999887655444
No 382
>3u7q_B Nitrogenase molybdenum-iron protein beta chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1fp4_B* 1g21_B* 1g20_B* 1m1n_B* 1l5h_B* 1m1y_B* 1m34_B* 1n2c_B* 2afh_B* 2afi_B* 2afk_B* 2min_B* 3k1a_B* 3min_B*
Probab=41.70 E-value=37 Score=27.12 Aligned_cols=26 Identities=15% Similarity=0.231 Sum_probs=19.8
Q ss_pred CCccEEEecCCCccHHHHHHHh-------CCccEEE
Q 040291 106 EKLDCFIADGYMAWSMEVAKKM-------NVRGALF 134 (160)
Q Consensus 106 ~~~d~vI~D~~~~~~~~~A~~l-------giP~i~~ 134 (160)
.+||++|... +...+|+++ |||++.+
T Consensus 437 ~~pDLlig~s---~~k~~a~~~~~~~~~~giP~iri 469 (523)
T 3u7q_B 437 DKPDFMIGNS---YGKFIQRDTLHKGKEFEVPLIRI 469 (523)
T ss_dssp TCCSEEEECT---THHHHHHHHHHHCGGGCCCEEEC
T ss_pred cCCCEEEECc---cHHHHHHHhhcccccCCCceEEe
Confidence 4799999874 455677777 9999864
No 383
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=41.61 E-value=16 Score=28.72 Aligned_cols=35 Identities=17% Similarity=0.278 Sum_probs=25.1
Q ss_pred CCCCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCC
Q 040291 1 MNRPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTD 40 (160)
Q Consensus 1 m~~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~ 40 (160)
|+...|+|+-.+..| +..|..|++||++|+++--.
T Consensus 1 M~~~DVvIIGgGi~G-----~~~A~~La~~G~~V~llE~~ 35 (501)
T 2qcu_A 1 METKDLIVIGGGING-----AGIAADAAGRGLSVLMLEAQ 35 (501)
T ss_dssp --CBSEEEECCSHHH-----HHHHHHHHHTTCCEEEECSS
T ss_pred CCcCCEEEECcCHHH-----HHHHHHHHhCCCCEEEEECC
Confidence 556677777655444 66888999999999998543
No 384
>3kto_A Response regulator receiver protein; PSI-II,structural genomics, protein structure initiative; 1.98A {Pseudoalteromonas atlantica T6C} SCOP: c.23.1.0
Probab=41.61 E-value=16 Score=22.38 Aligned_cols=31 Identities=6% Similarity=0.123 Sum_probs=16.7
Q ss_pred CCccEEEecCCCcc----HHHHHHHh-----CCccEEEcc
Q 040291 106 EKLDCFIADGYMAW----SMEVAKKM-----NVRGALFWP 136 (160)
Q Consensus 106 ~~~d~vI~D~~~~~----~~~~A~~l-----giP~i~~~~ 136 (160)
.+||+||.|...+. +..+.+++ ++|.+.+..
T Consensus 49 ~~~dlvi~D~~l~~~~~~g~~~~~~l~~~~~~~~ii~~s~ 88 (136)
T 3kto_A 49 DDAIGMIIEAHLEDKKDSGIELLETLVKRGFHLPTIVMAS 88 (136)
T ss_dssp TTEEEEEEETTGGGBTTHHHHHHHHHHHTTCCCCEEEEES
T ss_pred cCCCEEEEeCcCCCCCccHHHHHHHHHhCCCCCCEEEEEc
Confidence 45777777766543 23333322 466666544
No 385
>1i3c_A Response regulator RCP1; phytochrome, signaling protein; 1.90A {Synechocystis SP} SCOP: c.23.1.1 PDB: 1jlk_A
Probab=41.50 E-value=40 Score=20.94 Aligned_cols=31 Identities=13% Similarity=0.130 Sum_probs=19.4
Q ss_pred CccEEEecCCCcc--HHHHHHHh-------CCccEEEccc
Q 040291 107 KLDCFIADGYMAW--SMEVAKKM-------NVRGALFWPS 137 (160)
Q Consensus 107 ~~d~vI~D~~~~~--~~~~A~~l-------giP~i~~~~~ 137 (160)
+||+||.|...+. +..+.+++ ++|.+.+...
T Consensus 61 ~~dlillD~~lp~~~g~~l~~~l~~~~~~~~~piiils~~ 100 (149)
T 1i3c_A 61 RPNLILLDLNLPKKDGREVLAEIKQNPDLKRIPVVVLTTS 100 (149)
T ss_dssp CCSEEEECSCCSSSCHHHHHHHHHHCTTTTTSCEEEEESC
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHhCcCcCCCeEEEEECC
Confidence 6899999986643 44444332 4677776554
No 386
>1a04_A Nitrate/nitrite response regulator protein NARL; signal transduction protein, response regulators, two- component systems; 2.20A {Escherichia coli} SCOP: a.4.6.2 c.23.1.1 PDB: 1rnl_A
Probab=41.48 E-value=36 Score=22.73 Aligned_cols=32 Identities=25% Similarity=0.175 Sum_probs=19.9
Q ss_pred CCccEEEecCCCcc--HHHHHHHh-----CCccEEEccc
Q 040291 106 EKLDCFIADGYMAW--SMEVAKKM-----NVRGALFWPS 137 (160)
Q Consensus 106 ~~~d~vI~D~~~~~--~~~~A~~l-----giP~i~~~~~ 137 (160)
.+||+||.|...+. +..+++++ ++|.+.+...
T Consensus 50 ~~~dlvllD~~lp~~~g~~~~~~lr~~~~~~~ii~ls~~ 88 (215)
T 1a04_A 50 LDPDLILLDLNMPGMNGLETLDKLREKSLSGRIVVFSVS 88 (215)
T ss_dssp HCCSEEEEETTSTTSCHHHHHHHHHHSCCCSEEEEEECC
T ss_pred cCCCEEEEeCCCCCCcHHHHHHHHHHhCCCCcEEEEECC
Confidence 36899999987643 44444433 4676666543
No 387
>2a33_A Hypothetical protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT2G37210; 1.95A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4o_A
Probab=41.41 E-value=52 Score=22.96 Aligned_cols=33 Identities=12% Similarity=0.230 Sum_probs=23.2
Q ss_pred CeEEEEcCCCCCC----hHHHHHHHHHHHhCCCEEEE
Q 040291 4 PHVLVLPIPAQGH----VIPLLEFSQCLAKQGFRVTF 36 (160)
Q Consensus 4 ~~i~~~~~p~~GH----~~P~l~la~~L~~rGh~Vt~ 36 (160)
.+|.+++....+- ..-..+|++.|+++|+.|..
T Consensus 14 ~~IaV~cGS~~~~~~~y~~~A~~lg~~LA~~G~~vVs 50 (215)
T 2a33_A 14 RRICVFCGSSQGKKSSYQDAAVDLGNELVSRNIDLVY 50 (215)
T ss_dssp SEEEEECCSSCCSSHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred CeEEEEECCCCCCchHHHHHHHHHHHHHHHCCCEEEE
Confidence 3588886555543 23467888999999987754
No 388
>1js1_X Transcarbamylase; alpha/beta topology, two domains, transferase; 2.00A {Bacteroides fragilis} SCOP: c.78.1.1 c.78.1.1 PDB: 2fg6_X* 2fg7_X* 2g7m_X*
Probab=41.36 E-value=40 Score=25.26 Aligned_cols=39 Identities=8% Similarity=0.064 Sum_probs=30.8
Q ss_pred eEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCCCCh
Q 040291 5 HVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDH 43 (160)
Q Consensus 5 ~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~~~ 43 (160)
+|++.|.|-.|.-+-...++..++.-|.+|++++++.+.
T Consensus 170 ~ia~a~~~~vGD~rva~Sl~~~~~~~G~~v~~~~P~~~~ 208 (324)
T 1js1_X 170 VMTWAPHPRPLPQAVPNSFAEWMNATDYEFVITHPEGYE 208 (324)
T ss_dssp EEECCCCSSCCCSHHHHHHHHHHHTSSSEEEEECCTTCC
T ss_pred EEEEEcccccCCcchHHHHHHHHHHCCCEEEEeCCcccC
Confidence 455556666777777788888888889999999998774
No 389
>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}
Probab=41.32 E-value=43 Score=23.57 Aligned_cols=35 Identities=17% Similarity=0.199 Sum_probs=24.9
Q ss_pred CCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCC
Q 040291 3 RPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTD 40 (160)
Q Consensus 3 ~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~ 40 (160)
+.++++++.++.| + =..++++|+++|++|.++...
T Consensus 24 ~~k~vlITGas~g-I--G~~~a~~l~~~G~~v~~~~~~ 58 (269)
T 3gk3_A 24 AKRVAFVTGGMGG-L--GAAISRRLHDAGMAVAVSHSE 58 (269)
T ss_dssp CCCEEEETTTTSH-H--HHHHHHHHHTTTCEEEEEECS
T ss_pred cCCEEEEECCCch-H--HHHHHHHHHHCCCEEEEEcCC
Confidence 4567777754432 2 257899999999999887643
No 390
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=41.31 E-value=44 Score=23.38 Aligned_cols=34 Identities=15% Similarity=0.095 Sum_probs=24.4
Q ss_pred CeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCC
Q 040291 4 PHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTD 40 (160)
Q Consensus 4 ~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~ 40 (160)
.+.++++..+.| -=..++++|+++|++|.++.-.
T Consensus 8 gk~~lVTGas~g---IG~a~a~~l~~~G~~V~~~~r~ 41 (255)
T 4eso_A 8 GKKAIVIGGTHG---MGLATVRRLVEGGAEVLLTGRN 41 (255)
T ss_dssp TCEEEEETCSSH---HHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCCH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 467777755543 2357899999999999887543
No 391
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=41.28 E-value=9.1 Score=29.32 Aligned_cols=34 Identities=24% Similarity=0.149 Sum_probs=25.9
Q ss_pred CCCCeEEEEcCCCCCChHHHHHHHHHHHhCC-CEEEEEeC
Q 040291 1 MNRPHVLVLPIPAQGHVIPLLEFSQCLAKQG-FRVTFVNT 39 (160)
Q Consensus 1 m~~~~i~~~~~p~~GH~~P~l~la~~L~~rG-h~Vt~~~~ 39 (160)
|+..+|+|+-.+..| +..|.+|+++| ++|+++--
T Consensus 21 m~~~dVvIIGgGiaG-----ls~A~~La~~G~~~V~vlE~ 55 (448)
T 3axb_A 21 MPRFDYVVVGAGVVG-----LAAAYYLKVWSGGSVLVVDA 55 (448)
T ss_dssp CCEEEEEEECCSHHH-----HHHHHHHHHHHCSCEEEEES
T ss_pred CCcCCEEEECcCHHH-----HHHHHHHHhCCCCcEEEEcc
Confidence 445567777655555 67788999999 99999865
No 392
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=41.24 E-value=48 Score=22.95 Aligned_cols=35 Identities=17% Similarity=0.122 Sum_probs=24.0
Q ss_pred CCeEEEEcCCCCCChHHHHHHHHHHHh-CCCEEEEEeCC
Q 040291 3 RPHVLVLPIPAQGHVIPLLEFSQCLAK-QGFRVTFVNTD 40 (160)
Q Consensus 3 ~~~i~~~~~p~~GH~~P~l~la~~L~~-rGh~Vt~~~~~ 40 (160)
+.+.++++. +.|-+ =..++++|++ +|++|+++.-.
T Consensus 3 ~~k~vlITG-asggI--G~~~a~~L~~~~g~~V~~~~r~ 38 (276)
T 1wma_A 3 GIHVALVTG-GNKGI--GLAIVRDLCRLFSGDVVLTARD 38 (276)
T ss_dssp CCCEEEESS-CSSHH--HHHHHHHHHHHSSSEEEEEESS
T ss_pred CCCEEEEeC-CCcHH--HHHHHHHHHHhcCCeEEEEeCC
Confidence 445666663 33433 3578999999 99999987653
No 393
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=41.24 E-value=22 Score=26.89 Aligned_cols=30 Identities=20% Similarity=0.318 Sum_probs=21.9
Q ss_pred eEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeC
Q 040291 5 HVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNT 39 (160)
Q Consensus 5 ~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~ 39 (160)
+|+|+-.+..| +..|..|+++|++|+++=-
T Consensus 2 dVvVIGaGiaG-----LsaA~~La~~G~~V~vlE~ 31 (421)
T 3nrn_A 2 RAVVVGAGLGG-----LLAGAFLARNGHEIIVLEK 31 (421)
T ss_dssp EEEEESCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred cEEEECCCHHH-----HHHHHHHHHCCCeEEEEeC
Confidence 55666554444 6678899999999999843
No 394
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=41.22 E-value=11 Score=27.21 Aligned_cols=33 Identities=9% Similarity=-0.056 Sum_probs=24.9
Q ss_pred CeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCCC
Q 040291 4 PHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDY 41 (160)
Q Consensus 4 ~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~ 41 (160)
.+|+++-.+..| +..|..|+++|++|+++-...
T Consensus 8 ~~vvIIG~G~aG-----l~aA~~l~~~g~~v~lie~~~ 40 (332)
T 3lzw_A 8 YDITIIGGGPVG-----LFTAFYGGMRQASVKIIESLP 40 (332)
T ss_dssp EEEEEECCSHHH-----HHHHHHHHHTTCCEEEECSSS
T ss_pred ceEEEECCCHHH-----HHHHHHHHHCCCCEEEEEcCC
Confidence 467777655445 578888999999999987643
No 395
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=41.18 E-value=40 Score=24.06 Aligned_cols=33 Identities=21% Similarity=0.247 Sum_probs=23.6
Q ss_pred CeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeC
Q 040291 4 PHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNT 39 (160)
Q Consensus 4 ~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~ 39 (160)
.++++++.++.| -=..++++|+++|++|.++.-
T Consensus 25 ~k~~lVTGas~G---IG~~ia~~la~~G~~V~~~~r 57 (281)
T 3v2h_A 25 TKTAVITGSTSG---IGLAIARTLAKAGANIVLNGF 57 (281)
T ss_dssp TCEEEEETCSSH---HHHHHHHHHHHTTCEEEEECC
T ss_pred CCEEEEeCCCcH---HHHHHHHHHHHCCCEEEEEeC
Confidence 356777755443 235789999999999987654
No 396
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=41.17 E-value=40 Score=23.84 Aligned_cols=33 Identities=18% Similarity=0.232 Sum_probs=24.3
Q ss_pred CeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeC
Q 040291 4 PHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNT 39 (160)
Q Consensus 4 ~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~ 39 (160)
.++++++.++.| -=..++++|+++|++|.++.-
T Consensus 10 gk~vlVTGas~g---IG~~ia~~l~~~G~~V~~~~~ 42 (287)
T 3pxx_A 10 DKVVLVTGGARG---QGRSHAVKLAEEGADIILFDI 42 (287)
T ss_dssp TCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEEC
T ss_pred CCEEEEeCCCCh---HHHHHHHHHHHCCCeEEEEcc
Confidence 467777755543 236789999999999998754
No 397
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=40.93 E-value=38 Score=24.22 Aligned_cols=31 Identities=19% Similarity=0.306 Sum_probs=23.5
Q ss_pred CeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeC
Q 040291 4 PHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNT 39 (160)
Q Consensus 4 ~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~ 39 (160)
++|+++-.+..|. .+++.|++.||+|+++..
T Consensus 6 m~i~iiG~G~~G~-----~~a~~l~~~g~~V~~~~~ 36 (299)
T 1vpd_A 6 MKVGFIGLGIMGK-----PMSKNLLKAGYSLVVSDR 36 (299)
T ss_dssp CEEEEECCSTTHH-----HHHHHHHHTTCEEEEECS
T ss_pred ceEEEECchHHHH-----HHHHHHHhCCCEEEEEeC
Confidence 5788887665553 468889999999987654
No 398
>3fgn_A Dethiobiotin synthetase; biotin biosynthesis, BIOD, ATP-BIND ligase, magnesium, nucleotide-binding; 1.85A {Mycobacterium tuberculosis} PDB: 3fmf_A* 3fmi_A* 3fpa_A*
Probab=40.89 E-value=63 Score=22.99 Aligned_cols=44 Identities=9% Similarity=0.066 Sum_probs=0.0
Q ss_pred HHHHHHHHhcCCCCCccEEEecC---------CC-ccHHHHHHHhCCccEEEccc
Q 040291 93 LEELIEDINSREDEKLDCFIADG---------YM-AWSMEVAKKMNVRGALFWPS 137 (160)
Q Consensus 93 ~~~ll~~l~~~~~~~~d~vI~D~---------~~-~~~~~~A~~lgiP~i~~~~~ 137 (160)
.+++.+.+.+.. .++|++|.|. -. ....++|+.++.|++.+...
T Consensus 113 ~~~i~~~~~~l~-~~~D~vlIEGagGl~~pl~~~~~~~adla~~l~~pVILV~~~ 166 (251)
T 3fgn_A 113 RDQIVRLIADLD-RPGRLTLVEGAGGLLVELAEPGVTLRDVAVDVAAAALVVVTA 166 (251)
T ss_dssp HHHHHHHHHTTC-CTTCEEEEECSSSTTCEEETTTEEHHHHHHHTTCEEEEEECS
T ss_pred HHHHHHHHHHHH-hcCCEEEEECCCCCcCCcCcccchHHHHHHHcCCCEEEEEcC
No 399
>3qvl_A Putative hydantoin racemase; isomerase; HET: 5HY; 1.82A {Klebsiella pneumoniae subsp} PDB: 3qvk_A* 3qvj_A
Probab=40.87 E-value=93 Score=21.96 Aligned_cols=29 Identities=3% Similarity=-0.068 Sum_probs=20.8
Q ss_pred CCccEEEecCCCccH-HHHHHHhCCccEEE
Q 040291 106 EKLDCFIADGYMAWS-MEVAKKMNVRGALF 134 (160)
Q Consensus 106 ~~~d~vI~D~~~~~~-~~~A~~lgiP~i~~ 134 (160)
.++|+||.-.+...+ ..+.+.+++|++..
T Consensus 68 ~g~d~iviaCnt~~~l~~lr~~~~iPvigi 97 (245)
T 3qvl_A 68 QGVDGHVIASFGDPGLLAARELAQGPVIGI 97 (245)
T ss_dssp HTCSEEEEC-CCCTTHHHHHHHCSSCEEEH
T ss_pred CCCCEEEEeCCChhHHHHHHHHcCCCEECc
Confidence 478999988776444 45667789998875
No 400
>3f6c_A Positive transcription regulator EVGA; structural genomics, PSI-2, protein structure initiative, PO transcription regulator EVGA; 1.45A {Escherichia coli k-12}
Probab=40.81 E-value=27 Score=21.07 Aligned_cols=31 Identities=16% Similarity=0.036 Sum_probs=17.6
Q ss_pred CCccEEEecCCCcc--HHHHHHHh-----CCccEEEcc
Q 040291 106 EKLDCFIADGYMAW--SMEVAKKM-----NVRGALFWP 136 (160)
Q Consensus 106 ~~~d~vI~D~~~~~--~~~~A~~l-----giP~i~~~~ 136 (160)
.+||+||.|...+. +..+.+++ ++|.+.+..
T Consensus 45 ~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~ii~~s~ 82 (134)
T 3f6c_A 45 LKPDIVIIDVDIPGVNGIQVLETLRKRQYSGIIIIVSA 82 (134)
T ss_dssp HCCSEEEEETTCSSSCHHHHHHHHHHTTCCSEEEEEEC
T ss_pred cCCCEEEEecCCCCCChHHHHHHHHhcCCCCeEEEEeC
Confidence 36788888876543 34444332 466665544
No 401
>3hju_A Monoglyceride lipase; alpha/beta hydrolase, hydrolase, serine esterase; 2.20A {Homo sapiens}
Probab=40.80 E-value=38 Score=24.11 Aligned_cols=35 Identities=14% Similarity=0.042 Sum_probs=27.3
Q ss_pred EEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCC
Q 040291 6 VLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTD 40 (160)
Q Consensus 6 i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~ 40 (160)
++++-.+..|...-+..+++.|+++|++|..+--.
T Consensus 62 ~vv~~HG~~~~~~~~~~~~~~l~~~g~~vi~~D~~ 96 (342)
T 3hju_A 62 LIFVSHGAGEHSGRYEELARMLMGLDLLVFAHDHV 96 (342)
T ss_dssp EEEEECCTTCCGGGGHHHHHHHHTTTEEEEEECCT
T ss_pred EEEEECCCCcccchHHHHHHHHHhCCCeEEEEcCC
Confidence 45555566777778889999999999999887543
No 402
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=40.79 E-value=26 Score=25.03 Aligned_cols=31 Identities=13% Similarity=0.212 Sum_probs=23.1
Q ss_pred CCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEe
Q 040291 3 RPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVN 38 (160)
Q Consensus 3 ~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~ 38 (160)
+++|+++-.+..|. .+++.|++.||+|+++.
T Consensus 3 ~m~i~iiG~G~~G~-----~~a~~l~~~g~~V~~~~ 33 (295)
T 1yb4_A 3 AMKLGFIGLGIMGS-----PMAINLARAGHQLHVTT 33 (295)
T ss_dssp -CEEEECCCSTTHH-----HHHHHHHHTTCEEEECC
T ss_pred CCEEEEEccCHHHH-----HHHHHHHhCCCEEEEEc
Confidence 35788886555553 46888999999998775
No 403
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=40.76 E-value=19 Score=24.40 Aligned_cols=20 Identities=5% Similarity=0.120 Sum_probs=17.2
Q ss_pred HHHHHHHHhCCCEEEEEeCC
Q 040291 21 LEFSQCLAKQGFRVTFVNTD 40 (160)
Q Consensus 21 l~la~~L~~rGh~Vt~~~~~ 40 (160)
..++++|+++|++|+.+.-.
T Consensus 14 ~~l~~~L~~~g~~V~~~~R~ 33 (219)
T 3dqp_A 14 KSLLKSLSTTDYQIYAGARK 33 (219)
T ss_dssp HHHHHHHTTSSCEEEEEESS
T ss_pred HHHHHHHHHCCCEEEEEECC
Confidence 57899999999999988754
No 404
>3e61_A Putative transcriptional repressor of ribose OPER; structural genomics, DNA-binding, transcripti regulation, PSI-2; 2.00A {Staphylococcus saprophyticus subsp}
Probab=40.74 E-value=30 Score=24.14 Aligned_cols=32 Identities=6% Similarity=0.003 Sum_probs=19.9
Q ss_pred CCccEEEecCCCccHHH-HHHHhCCccEEEccc
Q 040291 106 EKLDCFIADGYMAWSME-VAKKMNVRGALFWPS 137 (160)
Q Consensus 106 ~~~d~vI~D~~~~~~~~-~A~~lgiP~i~~~~~ 137 (160)
.++|.||.......... .+.+.|+|+|.+...
T Consensus 63 ~~~dgiIi~~~~~~~~~~~l~~~~iPvV~~~~~ 95 (277)
T 3e61_A 63 HNCTGMISTAFNENIIENTLTDHHIPFVFIDRI 95 (277)
T ss_dssp TTCSEEEECGGGHHHHHHHHHHC-CCEEEGGGC
T ss_pred CCCCEEEEecCChHHHHHHHHcCCCCEEEEecc
Confidence 47888887653333344 566678998887554
No 405
>3r5x_A D-alanine--D-alanine ligase; alpha-beta structure, cytosol, structural genomics, for structural genomics of infectious diseases, csgid; HET: MSE ATP; 2.00A {Bacillus anthracis} PDB: 3r23_A*
Probab=40.60 E-value=31 Score=24.76 Aligned_cols=45 Identities=13% Similarity=0.095 Sum_probs=30.6
Q ss_pred CCCeEEEEcCCCCC----ChHHHHHHHHHHHhCCCEEEEEeCCCChhhH
Q 040291 2 NRPHVLVLPIPAQG----HVIPLLEFSQCLAKQGFRVTFVNTDYDHKRI 46 (160)
Q Consensus 2 ~~~~i~~~~~p~~G----H~~P~l~la~~L~~rGh~Vt~~~~~~~~~~~ 46 (160)
++++|+++..+-.+ -...-..++++|.++||+|..+........+
T Consensus 2 ~~m~v~vl~gg~s~e~~vs~~s~~~v~~al~~~g~~v~~i~~~~~~~~~ 50 (307)
T 3r5x_A 2 NAMRIGVIMGGVSSEKQVSIMTGNEMIANLDKNKYEIVPITLNEKMDLI 50 (307)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHHHHHHSCTTTEEEEEEECSSGGGHH
T ss_pred CCcEEEEEeCCCCcchHhHHHHHHHHHHHHHHCCCEEEEEcccCchhHH
Confidence 35788887733211 1355678889999999999998877544333
No 406
>2oqr_A Sensory transduction protein REGX3; response regulator, winged-helix-turn-helix, DNA-binding, 3D swapping, two component system; 2.03A {Mycobacterium tuberculosis H37RV}
Probab=40.52 E-value=40 Score=22.74 Aligned_cols=34 Identities=15% Similarity=0.123 Sum_probs=22.2
Q ss_pred CCccEEEecCCCcc--HHHHHHH----hCCccEEEccchH
Q 040291 106 EKLDCFIADGYMAW--SMEVAKK----MNVRGALFWPSSA 139 (160)
Q Consensus 106 ~~~d~vI~D~~~~~--~~~~A~~----lgiP~i~~~~~~~ 139 (160)
.+||+||.|...+. +..++++ -++|.+.+....-
T Consensus 47 ~~~dlvllD~~l~~~~g~~~~~~l~~~~~~~ii~lt~~~~ 86 (230)
T 2oqr_A 47 AGADIVLLDLMLPGMSGTDVCKQLRARSSVPVIMVTARDS 86 (230)
T ss_dssp HCCSEEEEESSCSSSCHHHHHHHHHHHCSCSEEEEECCHH
T ss_pred cCCCEEEEECCCCCCCHHHHHHHHHcCCCCCEEEEeCCCc
Confidence 46899999987643 4444433 3688887766543
No 407
>3d59_A Platelet-activating factor acetylhydrolase; secreted protein, alpha/beta-hydrolase-fold, LDL-bound, lipoprotein associated phospholipase A2, LP-PLA2; 1.50A {Homo sapiens} PDB: 3d5e_A 3f97_A* 3f98_A 3f9c_A* 3f96_A*
Probab=40.47 E-value=31 Score=25.70 Aligned_cols=37 Identities=19% Similarity=0.124 Sum_probs=28.8
Q ss_pred eEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCCC
Q 040291 5 HVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDY 41 (160)
Q Consensus 5 ~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~ 41 (160)
-++++..++.|.-.-+..+++.|+++|+.|..+-...
T Consensus 99 P~Vv~~HG~~~~~~~~~~~a~~La~~Gy~V~~~d~~g 135 (383)
T 3d59_A 99 PLVVFSHGLGAFRTLYSAIGIDLASHGFIVAAVEHRD 135 (383)
T ss_dssp EEEEEECCTTCCTTTTHHHHHHHHHTTCEEEEECCCS
T ss_pred CEEEEcCCCCCCchHHHHHHHHHHhCceEEEEeccCC
Confidence 3566666777777778899999999999988776553
No 408
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=40.43 E-value=56 Score=23.65 Aligned_cols=33 Identities=18% Similarity=0.141 Sum_probs=24.8
Q ss_pred CCCCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEe
Q 040291 1 MNRPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVN 38 (160)
Q Consensus 1 m~~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~ 38 (160)
|+.++|+++.. -.......+.|.+.||+|.+..
T Consensus 5 ~~~mki~v~~~-----~~~~~~~~~~L~~~g~~v~~~~ 37 (300)
T 2rir_A 5 LTGLKIAVIGG-----DARQLEIIRKLTEQQADIYLVG 37 (300)
T ss_dssp CCSCEEEEESB-----CHHHHHHHHHHHHTTCEEEEES
T ss_pred ccCCEEEEECC-----CHHHHHHHHHHHhCCCEEEEEe
Confidence 56778888743 2456677899999999998763
No 409
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=40.38 E-value=17 Score=25.92 Aligned_cols=31 Identities=6% Similarity=0.094 Sum_probs=24.2
Q ss_pred CeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeC
Q 040291 4 PHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNT 39 (160)
Q Consensus 4 ~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~ 39 (160)
.+|+++-.+..| +..|..|+++|++|+++-.
T Consensus 16 ~~vvIIG~G~aG-----l~aA~~l~~~g~~v~lie~ 46 (323)
T 3f8d_A 16 FDVIIVGLGPAA-----YGAALYSARYMLKTLVIGE 46 (323)
T ss_dssp EEEEEECCSHHH-----HHHHHHHHHTTCCEEEEES
T ss_pred cCEEEECccHHH-----HHHHHHHHHCCCcEEEEec
Confidence 367777655555 6778899999999999875
No 410
>3of5_A Dethiobiotin synthetase; structural genomics, center for structural genomics of infec diseases, csgid, ligase; 1.52A {Francisella tularensis subsp}
Probab=40.32 E-value=46 Score=23.19 Aligned_cols=36 Identities=6% Similarity=0.021 Sum_probs=28.0
Q ss_pred CCeEEEEc--CCCCCChHHHHHHHHHHHhCCCEEEEEe
Q 040291 3 RPHVLVLP--IPAQGHVIPLLEFSQCLAKQGFRVTFVN 38 (160)
Q Consensus 3 ~~~i~~~~--~p~~GH~~P~l~la~~L~~rGh~Vt~~~ 38 (160)
+++.++++ -++.|=..-...|++.|+++|.+|.++-
T Consensus 3 ~mk~i~Itgt~t~vGKT~vt~~L~~~l~~~G~~V~~~K 40 (228)
T 3of5_A 3 AMKKFFIIGTDTEVGKTYISTKLIEVCEHQNIKSLCLK 40 (228)
T ss_dssp TCEEEEEEESSSSSCHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred CCcEEEEEeCCCCCCHHHHHHHHHHHHHHCCCeeEEec
Confidence 44444444 3567888999999999999999999964
No 411
>3f6r_A Flavodoxin; FMN binding, oxidized, electron transport, flavoprotein, FMN, transport; HET: FMN; 2.00A {Desulfovibrio desulfuricans} SCOP: c.23.5.0 PDB: 3f6s_A* 3f90_A* 3kap_A* 3kaq_A*
Probab=40.29 E-value=58 Score=20.45 Aligned_cols=39 Identities=21% Similarity=0.294 Sum_probs=26.2
Q ss_pred CeEEEEcCCCCCChHH-HHHHHHHHHhCCCEEEEEeCCCC
Q 040291 4 PHVLVLPIPAQGHVIP-LLEFSQCLAKQGFRVTFVNTDYD 42 (160)
Q Consensus 4 ~~i~~~~~p~~GH~~P-~l~la~~L~~rGh~Vt~~~~~~~ 42 (160)
++++++-+...|+..- ...+++.|.++|++|+++.....
T Consensus 2 ~ki~I~y~S~tGnT~~~A~~ia~~l~~~g~~v~~~~~~~~ 41 (148)
T 3f6r_A 2 SKVLIVFGSSTGNTESIAQKLEELIAAGGHEVTLLNAADA 41 (148)
T ss_dssp CEEEEEEECSSSHHHHHHHHHHHHHHTTTCEEEEEETTTB
T ss_pred CeEEEEEECCCchHHHHHHHHHHHHHhCCCeEEEEehhhC
Confidence 3566665556787643 34466677788999999876543
No 412
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=40.25 E-value=24 Score=24.28 Aligned_cols=20 Identities=20% Similarity=0.320 Sum_probs=16.5
Q ss_pred HHHHHHHHhCCCEEEEEeCC
Q 040291 21 LEFSQCLAKQGFRVTFVNTD 40 (160)
Q Consensus 21 l~la~~L~~rGh~Vt~~~~~ 40 (160)
..++++|+++|++|+.+.-.
T Consensus 15 ~~l~~~L~~~g~~V~~~~r~ 34 (255)
T 2dkn_A 15 AALKELLARAGHTVIGIDRG 34 (255)
T ss_dssp HHHHHHHHHTTCEEEEEESS
T ss_pred HHHHHHHHhCCCEEEEEeCC
Confidence 56789999999999987643
No 413
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=40.24 E-value=22 Score=25.86 Aligned_cols=33 Identities=24% Similarity=0.207 Sum_probs=24.4
Q ss_pred CCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCC
Q 040291 3 RPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTD 40 (160)
Q Consensus 3 ~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~ 40 (160)
.++|+++-.+..| ..+++.|++.|++|+++...
T Consensus 30 ~~~I~iIG~G~mG-----~~~a~~l~~~g~~V~~~~~~ 62 (316)
T 2uyy_A 30 DKKIGFLGLGLMG-----SGIVSNLLKMGHTVTVWNRT 62 (316)
T ss_dssp SSCEEEECCSHHH-----HHHHHHHHHTTCCEEEECSS
T ss_pred CCeEEEEcccHHH-----HHHHHHHHhCCCEEEEEeCC
Confidence 4678888665555 35788899999999887543
No 414
>3rot_A ABC sugar transporter, periplasmic sugar binding; nysgrc, PSI-biology, structural genomics; 1.91A {Legionella pneumophila subsp}
Probab=40.22 E-value=70 Score=22.54 Aligned_cols=31 Identities=13% Similarity=-0.087 Sum_probs=21.3
Q ss_pred CCccEEEecCCCcc----HHHHHHHhCCccEEEcc
Q 040291 106 EKLDCFIADGYMAW----SMEVAKKMNVRGALFWP 136 (160)
Q Consensus 106 ~~~d~vI~D~~~~~----~~~~A~~lgiP~i~~~~ 136 (160)
.++|.||.-..... ....+.+.|||+|.+..
T Consensus 60 ~~vdgiii~~~~~~~~~~~~~~~~~~giPvV~~~~ 94 (297)
T 3rot_A 60 TYPSGIATTIPSDTAFSKSLQRANKLNIPVIAVDT 94 (297)
T ss_dssp TCCSEEEECCCCSSTTHHHHHHHHHHTCCEEEESC
T ss_pred cCCCEEEEeCCCHHHHHHHHHHHHHCCCCEEEEcC
Confidence 47899887665433 23446677999999864
No 415
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=40.22 E-value=49 Score=23.27 Aligned_cols=34 Identities=18% Similarity=0.210 Sum_probs=24.5
Q ss_pred CeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCC
Q 040291 4 PHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTD 40 (160)
Q Consensus 4 ~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~ 40 (160)
.+.++++.++.| -=..++++|+++|++|.++.-.
T Consensus 29 ~k~vlITGas~g---IG~~la~~l~~~G~~V~~~~r~ 62 (271)
T 4iin_A 29 GKNVLITGASKG---IGAEIAKTLASMGLKVWINYRS 62 (271)
T ss_dssp CCEEEETTCSSH---HHHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEECCCcH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 456777755443 2358899999999999887653
No 416
>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*
Probab=40.20 E-value=52 Score=23.51 Aligned_cols=32 Identities=16% Similarity=0.084 Sum_probs=23.1
Q ss_pred CeEEEEcCCC--CCChHHHHHHHHHHHhCCCEEEEEe
Q 040291 4 PHVLVLPIPA--QGHVIPLLEFSQCLAKQGFRVTFVN 38 (160)
Q Consensus 4 ~~i~~~~~p~--~GH~~P~l~la~~L~~rGh~Vt~~~ 38 (160)
.++++++..+ .| + =..++++|+++|++|.++.
T Consensus 8 ~k~~lVTGas~~~G-I--G~aia~~la~~G~~V~~~~ 41 (297)
T 1d7o_A 8 GKRAFIAGIADDNG-Y--GWAVAKSLAAAGAEILVGT 41 (297)
T ss_dssp TCEEEEECCSSSSS-H--HHHHHHHHHHTTCEEEEEE
T ss_pred CCEEEEECCCCCCC-h--HHHHHHHHHHCCCeEEEee
Confidence 3567777554 33 2 3578999999999998864
No 417
>3pdi_B Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=40.18 E-value=38 Score=26.49 Aligned_cols=37 Identities=11% Similarity=0.074 Sum_probs=24.3
Q ss_pred CCccEEEecCCCccHHHHHHHhCCccEEE-ccchHHHH
Q 040291 106 EKLDCFIADGYMAWSMEVAKKMNVRGALF-WPSSAASV 142 (160)
Q Consensus 106 ~~~d~vI~D~~~~~~~~~A~~lgiP~i~~-~~~~~~~~ 142 (160)
.+..+++.......+..+.+++|+|++.+ .+.+....
T Consensus 237 A~~ni~~~~~~~~~A~~Le~~~GiP~~~~~~p~G~~~T 274 (458)
T 3pdi_B 237 SVATLVVGQSLAGAADALAERTGVPDRRFGMLYGLDAV 274 (458)
T ss_dssp CSCEEEESGGGHHHHHHHHHHSCCCEEEECCSCHHHHH
T ss_pred CcEEEEecHHHHHHHHHHHHHHCCCEEecCCCcCHHHH
Confidence 35566655544344667889999999997 46555433
No 418
>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*
Probab=40.02 E-value=20 Score=25.80 Aligned_cols=35 Identities=20% Similarity=0.231 Sum_probs=23.6
Q ss_pred CCCCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeC
Q 040291 1 MNRPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNT 39 (160)
Q Consensus 1 m~~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~ 39 (160)
|..++|+++ ++.|.+- ..++++|.++||+|+.+..
T Consensus 1 M~~~~ilVt--GatG~iG--~~l~~~L~~~g~~v~~~~r 35 (321)
T 1e6u_A 1 MAKQRVFIA--GHRGMVG--SAIRRQLEQRGDVELVLRT 35 (321)
T ss_dssp -CCEEEEEE--TTTSHHH--HHHHHHHTTCTTEEEECCC
T ss_pred CCCCEEEEE--CCCcHHH--HHHHHHHHhCCCeEEEEec
Confidence 656666655 4455443 4678999999999988653
No 419
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=40.01 E-value=44 Score=23.45 Aligned_cols=34 Identities=12% Similarity=0.153 Sum_probs=24.4
Q ss_pred CeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCC
Q 040291 4 PHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTD 40 (160)
Q Consensus 4 ~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~ 40 (160)
.++++++..+.| + =..++++|+++|++|.++...
T Consensus 8 ~k~vlVTGas~G-I--G~aia~~la~~G~~V~~~~~~ 41 (259)
T 3edm_A 8 NRTIVVAGAGRD-I--GRACAIRFAQEGANVVLTYNG 41 (259)
T ss_dssp TCEEEEETTTSH-H--HHHHHHHHHHTTCEEEEEECS
T ss_pred CCEEEEECCCch-H--HHHHHHHHHHCCCEEEEEcCC
Confidence 467777755543 2 357899999999999887443
No 420
>3end_A Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein; BCHL, electron donor, DPOR, Fe protein, nitrogenase; HET: ADP; 1.63A {Rhodobacter sphaeroides 2} PDB: 3fwy_A*
Probab=39.92 E-value=41 Score=24.24 Aligned_cols=37 Identities=19% Similarity=0.110 Sum_probs=30.0
Q ss_pred eEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCCC
Q 040291 5 HVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDY 41 (160)
Q Consensus 5 ~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~ 41 (160)
.|++..-+|.|=..-...||..|+++|.+|.++=.+.
T Consensus 43 vI~v~~KGGvGKTT~a~nLA~~La~~G~~VlliD~D~ 79 (307)
T 3end_A 43 VFAVYGKGGIGKSTTSSNLSAAFSILGKRVLQIGCDP 79 (307)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEEESS
T ss_pred EEEEECCCCccHHHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 3555566777888999999999999999999986553
No 421
>1tqh_A Carboxylesterase precursor; tetrahedral intermediate, alpha/beta hydrolase; 1.63A {Geobacillus stearothermophilus} SCOP: c.69.1.29 PDB: 1r1d_A* 4diu_A
Probab=39.92 E-value=53 Score=22.34 Aligned_cols=33 Identities=12% Similarity=0.155 Sum_probs=25.9
Q ss_pred EEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEe
Q 040291 6 VLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVN 38 (160)
Q Consensus 6 i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~ 38 (160)
.+++-.+..|+..-+..+++.|+++|++|..+-
T Consensus 18 ~vvllHG~~~~~~~~~~~~~~L~~~g~~vi~~D 50 (247)
T 1tqh_A 18 AVLLLHGFTGNSADVRMLGRFLESKGYTCHAPI 50 (247)
T ss_dssp EEEEECCTTCCTHHHHHHHHHHHHTTCEEEECC
T ss_pred EEEEECCCCCChHHHHHHHHHHHHCCCEEEecc
Confidence 345555777787788899999999999988763
No 422
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=39.84 E-value=50 Score=23.10 Aligned_cols=34 Identities=24% Similarity=0.260 Sum_probs=23.7
Q ss_pred CeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCC
Q 040291 4 PHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTD 40 (160)
Q Consensus 4 ~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~ 40 (160)
.+.++++.++.| -=..++++|+++|++|.++.-.
T Consensus 29 ~k~vlITGas~g---IG~~la~~l~~~G~~V~~~~r~ 62 (262)
T 3rkr_A 29 GQVAVVTGASRG---IGAAIARKLGSLGARVVLTARD 62 (262)
T ss_dssp TCEEEESSTTSH---HHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCCh---HHHHHHHHHHHCCCEEEEEECC
Confidence 356777754432 2367899999999998876543
No 423
>1mvo_A PHOP response regulator; phosphate regulon, transcriptional regulatory protein, alpha/beta doubly wound fold, phosphorylation; 1.60A {Bacillus subtilis} SCOP: c.23.1.1
Probab=39.78 E-value=50 Score=19.85 Aligned_cols=31 Identities=23% Similarity=0.241 Sum_probs=17.5
Q ss_pred CCccEEEecCCCcc--HHHHHHHh-----CCccEEEcc
Q 040291 106 EKLDCFIADGYMAW--SMEVAKKM-----NVRGALFWP 136 (160)
Q Consensus 106 ~~~d~vI~D~~~~~--~~~~A~~l-----giP~i~~~~ 136 (160)
.+||+||.|...+. +..+.+++ .+|.+.+..
T Consensus 46 ~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~ 83 (136)
T 1mvo_A 46 EKPDLIVLDVMLPKLDGIEVCKQLRQQKLMFPILMLTA 83 (136)
T ss_dssp HCCSEEEEESSCSSSCHHHHHHHHHHTTCCCCEEEEEC
T ss_pred cCCCEEEEecCCCCCCHHHHHHHHHcCCCCCCEEEEEC
Confidence 36788888876542 33333332 466666544
No 424
>1jil_A Tyrrs, tyrosyl-tRNA synthetase; truncation, based inhibitor design, ligase; HET: 485; 2.20A {Staphylococcus aureus} SCOP: c.26.1.1 PDB: 1jij_A* 1jii_A* 1jik_A*
Probab=39.78 E-value=21 Score=27.71 Aligned_cols=33 Identities=21% Similarity=0.404 Sum_probs=24.2
Q ss_pred EEEcCCC---CCChHHHHHHHHHHHhCCCEEEEEeCC
Q 040291 7 LVLPIPA---QGHVIPLLEFSQCLAKQGFRVTFVNTD 40 (160)
Q Consensus 7 ~~~~~p~---~GH~~P~l~la~~L~~rGh~Vt~~~~~ 40 (160)
.+=|++- -||+.|++.+ +.|.+.||++.++...
T Consensus 38 G~dPTg~sLHlGh~v~l~~~-~~lQ~~G~~~~~lIgd 73 (420)
T 1jil_A 38 GADPTADSLHIGHLLPFLTL-RRFQEHGHRPIVLIGG 73 (420)
T ss_dssp EECCSSSSCBHHHHHHHHHH-HHHHHTTCEEEEEECT
T ss_pred eeCCCCCCccHHHHHHHHHH-HHHHHCCCcEEEEEcC
Confidence 3455543 2999976554 6899999999998754
No 425
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=39.69 E-value=47 Score=23.81 Aligned_cols=35 Identities=17% Similarity=0.184 Sum_probs=24.9
Q ss_pred CeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCCC
Q 040291 4 PHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDY 41 (160)
Q Consensus 4 ~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~ 41 (160)
.++++++.++.| + =..++++|+++|++|.++.-..
T Consensus 47 gk~vlVTGas~G-I--G~aia~~la~~G~~V~~~~r~~ 81 (291)
T 3ijr_A 47 GKNVLITGGDSG-I--GRAVSIAFAKEGANIAIAYLDE 81 (291)
T ss_dssp TCEEEEETTTSH-H--HHHHHHHHHHTTCEEEEEESSC
T ss_pred CCEEEEeCCCcH-H--HHHHHHHHHHCCCEEEEEeCCc
Confidence 357777755543 2 3578999999999998876543
No 426
>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*
Probab=39.68 E-value=49 Score=23.66 Aligned_cols=32 Identities=16% Similarity=0.126 Sum_probs=23.6
Q ss_pred CeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEe
Q 040291 4 PHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVN 38 (160)
Q Consensus 4 ~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~ 38 (160)
.++++++..+.| -=..++++|+++|++|+++.
T Consensus 9 ~k~~lVTGas~G---IG~aia~~la~~G~~V~~~~ 40 (291)
T 1e7w_A 9 VPVALVTGAAKR---LGRSIAEGLHAEGYAVCLHY 40 (291)
T ss_dssp CCEEEETTCSSH---HHHHHHHHHHHTTCEEEEEE
T ss_pred CCEEEEECCCch---HHHHHHHHHHHCCCeEEEEc
Confidence 356777755443 23578999999999999876
No 427
>1ydh_A AT5G11950; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; 2.15A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4d_A
Probab=39.66 E-value=62 Score=22.56 Aligned_cols=33 Identities=15% Similarity=0.219 Sum_probs=23.4
Q ss_pred CeEEEEcCCCCC----ChHHHHHHHHHHHhCCCEEEE
Q 040291 4 PHVLVLPIPAQG----HVIPLLEFSQCLAKQGFRVTF 36 (160)
Q Consensus 4 ~~i~~~~~p~~G----H~~P~l~la~~L~~rGh~Vt~ 36 (160)
.+|.++.....+ +..-..+|++.|+++|+.|..
T Consensus 10 ~~V~V~ggsr~~~~~~~~~~A~~lg~~LA~~g~~lV~ 46 (216)
T 1ydh_A 10 RKICVFCGSHSGHREVFSDAAIELGNELVKRKIDLVY 46 (216)
T ss_dssp SEEEEECCSCCCSSHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred CeEEEEeCCCCCCCcHHHHHHHHHHHHHHHCCCEEEE
Confidence 368888755544 335678888899999987643
No 428
>2zay_A Response regulator receiver protein; structural genomics, NYSGXRC, target 11006U, protein structure initiative; 2.00A {Desulfuromonas acetoxidans}
Probab=39.58 E-value=33 Score=21.09 Aligned_cols=32 Identities=9% Similarity=0.079 Sum_probs=19.7
Q ss_pred CCccEEEecCCCcc--HHHHHHH-------hCCccEEEccc
Q 040291 106 EKLDCFIADGYMAW--SMEVAKK-------MNVRGALFWPS 137 (160)
Q Consensus 106 ~~~d~vI~D~~~~~--~~~~A~~-------lgiP~i~~~~~ 137 (160)
.+||+||.|.-... +..+.++ -++|++.+...
T Consensus 51 ~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~~pii~ls~~ 91 (147)
T 2zay_A 51 THPHLIITEANMPKISGMDLFNSLKKNPQTASIPVIALSGR 91 (147)
T ss_dssp HCCSEEEEESCCSSSCHHHHHHHHHTSTTTTTSCEEEEESS
T ss_pred CCCCEEEEcCCCCCCCHHHHHHHHHcCcccCCCCEEEEeCC
Confidence 46899999976542 3444332 35777776553
No 429
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=39.34 E-value=22 Score=24.60 Aligned_cols=35 Identities=29% Similarity=0.381 Sum_probs=25.1
Q ss_pred CCCCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCC
Q 040291 1 MNRPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTD 40 (160)
Q Consensus 1 m~~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~ 40 (160)
|+..+|+++-.+..| +..|..|+++|.+|+++...
T Consensus 1 M~~~dVvVVGgG~aG-----l~aA~~la~~g~~v~lie~~ 35 (232)
T 2cul_A 1 MAAYQVLIVGAGFSG-----AETAFWLAQKGVRVGLLTQS 35 (232)
T ss_dssp -CCCSEEEECCSHHH-----HHHHHHHHHTTCCEEEEESC
T ss_pred CCCCCEEEECcCHHH-----HHHHHHHHHCCCCEEEEecC
Confidence 555667776544333 67888999999999998764
No 430
>2prs_A High-affinity zinc uptake system protein ZNUA; protein consists of two (beta/ALFA)4 domains, metal transport; 1.70A {Escherichia coli} PDB: 2osv_A 2ps0_A 2ps3_A 2ps9_A 2ogw_A 2xy4_A* 2xqv_A* 2xh8_A
Probab=39.33 E-value=39 Score=24.40 Aligned_cols=44 Identities=23% Similarity=0.291 Sum_probs=32.8
Q ss_pred HHHHHHHHHhcCCCCCccEEEecCCCcc--HHHHHHHhCCccEEEccch
Q 040291 92 KLEELIEDINSREDEKLDCFIADGYMAW--SMEVAKKMNVRGALFWPSS 138 (160)
Q Consensus 92 ~~~~ll~~l~~~~~~~~d~vI~D~~~~~--~~~~A~~lgiP~i~~~~~~ 138 (160)
.+.++.+.+++ .+..||+++..... +..+|++.|++.+.+.+.+
T Consensus 211 ~l~~l~~~ik~---~~v~~if~e~~~~~~~~~~ia~~~g~~v~~ld~l~ 256 (284)
T 2prs_A 211 RLHEIRTQLVE---QKATCVFAEPQFRPAVVESVARGTSVRMGTLDPLG 256 (284)
T ss_dssp HHHHHHHHHHH---TTCCEEEECTTSCSHHHHHHTTTSCCEEEECCTTC
T ss_pred HHHHHHHHHHH---cCCCEEEEeCCCChHHHHHHHHHcCCeEEEeccCc
Confidence 45666666655 68999999987754 4678999999998875543
No 431
>3tqq_A Methionyl-tRNA formyltransferase; protein synthesis; 2.00A {Coxiella burnetii}
Probab=39.28 E-value=43 Score=24.83 Aligned_cols=33 Identities=18% Similarity=0.185 Sum_probs=24.8
Q ss_pred CCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCC
Q 040291 3 RPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTD 40 (160)
Q Consensus 3 ~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~ 40 (160)
++||+++-.|..+ .+..++|.++||+|..+.+.
T Consensus 2 ~mrivf~Gtp~fa-----~~~L~~L~~~~~~v~~Vvt~ 34 (314)
T 3tqq_A 2 SLKIVFAGTPQFA-----VPTLRALIDSSHRVLAVYTQ 34 (314)
T ss_dssp CCEEEEEECSGGG-----HHHHHHHHHSSSEEEEEECC
T ss_pred CcEEEEECCCHHH-----HHHHHHHHHCCCeEEEEEeC
Confidence 5789988877554 34567888899999887774
No 432
>1a8s_A Chloroperoxidase F; haloperoxidase, oxidoreductase, propionate complex; 1.80A {Pseudomonas fluorescens} SCOP: c.69.1.12
Probab=39.24 E-value=43 Score=22.91 Aligned_cols=32 Identities=22% Similarity=0.110 Sum_probs=23.7
Q ss_pred EEEcCCCCCChHHHHHHHHHHHhCCCEEEEEe
Q 040291 7 LVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVN 38 (160)
Q Consensus 7 ~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~ 38 (160)
+++-.+..++..-+..+++.|+++|++|..+-
T Consensus 22 vvllHG~~~~~~~~~~~~~~L~~~g~~vi~~D 53 (273)
T 1a8s_A 22 IVFSHGWPLNADSWESQMIFLAAQGYRVIAHD 53 (273)
T ss_dssp EEEECCTTCCGGGGHHHHHHHHHTTCEEEEEC
T ss_pred EEEECCCCCcHHHHhhHHhhHhhCCcEEEEEC
Confidence 34444556666667888999999999998864
No 433
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=39.20 E-value=17 Score=26.52 Aligned_cols=33 Identities=36% Similarity=0.372 Sum_probs=24.7
Q ss_pred CCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCC
Q 040291 3 RPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTD 40 (160)
Q Consensus 3 ~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~ 40 (160)
.++|.++-.+..| ..+++.|+++||+|+++...
T Consensus 9 ~~~IgiIG~G~mG-----~~~A~~l~~~G~~V~~~dr~ 41 (306)
T 3l6d_A 9 EFDVSVIGLGAMG-----TIMAQVLLKQGKRVAIWNRS 41 (306)
T ss_dssp SCSEEEECCSHHH-----HHHHHHHHHTTCCEEEECSS
T ss_pred CCeEEEECCCHHH-----HHHHHHHHHCCCEEEEEeCC
Confidence 3578888655555 36899999999999987543
No 434
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=39.09 E-value=55 Score=22.94 Aligned_cols=35 Identities=20% Similarity=0.156 Sum_probs=25.6
Q ss_pred CCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCCCC
Q 040291 3 RPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYD 42 (160)
Q Consensus 3 ~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~~ 42 (160)
..+++++-. | .--..-++.|.+.|.+||++.+...
T Consensus 31 gk~VLVVGg---G--~va~~ka~~Ll~~GA~VtVvap~~~ 65 (223)
T 3dfz_A 31 GRSVLVVGG---G--TIATRRIKGFLQEGAAITVVAPTVS 65 (223)
T ss_dssp TCCEEEECC---S--HHHHHHHHHHGGGCCCEEEECSSCC
T ss_pred CCEEEEECC---C--HHHHHHHHHHHHCCCEEEEECCCCC
Confidence 456666643 3 4456778899999999999987654
No 435
>3nbm_A PTS system, lactose-specific IIBC components; PTS_IIB_LACTOSE, phosphoenolpyruvate:carbohydrate system, P- phosphorylation; HET: MSE; 1.30A {Streptococcus pneumoniae}
Probab=39.08 E-value=31 Score=21.24 Aligned_cols=37 Identities=16% Similarity=0.007 Sum_probs=27.1
Q ss_pred CCCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEe
Q 040291 2 NRPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVN 38 (160)
Q Consensus 2 ~~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~ 38 (160)
++++|++++..|.|--.-.-.+=++..++|.+|.+..
T Consensus 5 ~~mkIlL~C~aGmSTsllv~km~~~a~~~gi~v~i~a 41 (108)
T 3nbm_A 5 KELKVLVLCAGSGTSAQLANAINEGANLTEVRVIANS 41 (108)
T ss_dssp CCEEEEEEESSSSHHHHHHHHHHHHHHHHTCSEEEEE
T ss_pred cCceEEEECCCCCCHHHHHHHHHHHHHHCCCceEEEE
Confidence 3578999998887666655555566667899988855
No 436
>3noh_A Putative peptide binding protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.60A {Ruminococcus gnavus}
Probab=39.07 E-value=24 Score=22.49 Aligned_cols=17 Identities=18% Similarity=0.169 Sum_probs=13.1
Q ss_pred HHHHHHHHhCCCEEEEE
Q 040291 21 LEFSQCLAKQGFRVTFV 37 (160)
Q Consensus 21 l~la~~L~~rGh~Vt~~ 37 (160)
..||++|...|.+|++=
T Consensus 78 ~~Lc~RL~~AG~~V~lk 94 (139)
T 3noh_A 78 DSLCERLNDAGADVQIK 94 (139)
T ss_dssp HHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHhcCCCceec
Confidence 35677777789999983
No 437
>4e08_A DJ-1 beta; flavodoxin-like fold, stress response, motor protein; 2.00A {Drosophila melanogaster}
Probab=39.03 E-value=83 Score=20.84 Aligned_cols=37 Identities=19% Similarity=0.317 Sum_probs=27.1
Q ss_pred CeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCCC
Q 040291 4 PHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDY 41 (160)
Q Consensus 4 ~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~ 41 (160)
.||+++-+++.. ..-+......|.+.|++|++++...
T Consensus 6 kkv~ill~~g~~-~~e~~~~~~~l~~ag~~v~~~s~~~ 42 (190)
T 4e08_A 6 KSALVILAPGAE-EMEFIIAADVLRRAGIKVTVAGLNG 42 (190)
T ss_dssp CEEEEEECTTCC-HHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred cEEEEEECCCch-HHHHHHHHHHHHHCCCEEEEEECCC
Confidence 577777776653 3444556678888999999999875
No 438
>1cp2_A CP2, nitrogenase iron protein; oxidoreductase; 1.93A {Clostridium pasteurianum} SCOP: c.37.1.10
Probab=39.00 E-value=38 Score=23.75 Aligned_cols=36 Identities=17% Similarity=0.194 Sum_probs=29.5
Q ss_pred eEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCC
Q 040291 5 HVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTD 40 (160)
Q Consensus 5 ~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~ 40 (160)
.|++..-+|.|=..-...||..|+++|++|.++=.+
T Consensus 3 vI~vs~KGGvGKTT~a~nLA~~la~~G~~VlliD~D 38 (269)
T 1cp2_A 3 QVAIYGKGGIGKSTTTQNLTSGLHAMGKTIMVVGCD 38 (269)
T ss_dssp EEEEEECTTSSHHHHHHHHHHHHHTTTCCEEEEEEC
T ss_pred EEEEecCCCCcHHHHHHHHHHHHHHCCCcEEEEcCC
Confidence 355555777888899999999999999999987544
No 439
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=38.91 E-value=50 Score=23.50 Aligned_cols=34 Identities=18% Similarity=0.171 Sum_probs=24.2
Q ss_pred CeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCC
Q 040291 4 PHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTD 40 (160)
Q Consensus 4 ~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~ 40 (160)
.++++++.++.| -=..++++|+++|++|.++.-.
T Consensus 27 ~k~vlVTGas~G---IG~aia~~l~~~G~~V~~~~r~ 60 (277)
T 4dqx_A 27 QRVCIVTGGGSG---IGRATAELFAKNGAYVVVADVN 60 (277)
T ss_dssp TCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEECCCcH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 466777755543 2357899999999999887643
No 440
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=38.91 E-value=46 Score=23.76 Aligned_cols=34 Identities=18% Similarity=0.308 Sum_probs=24.7
Q ss_pred CeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCC
Q 040291 4 PHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTD 40 (160)
Q Consensus 4 ~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~ 40 (160)
.++++++..+.| + =..++++|+++|++|.++.-.
T Consensus 9 ~k~vlVTGas~G-I--G~aia~~l~~~G~~V~~~~r~ 42 (285)
T 3sc4_A 9 GKTMFISGGSRG-I--GLAIAKRVAADGANVALVAKS 42 (285)
T ss_dssp TCEEEEESCSSH-H--HHHHHHHHHTTTCEEEEEESC
T ss_pred CCEEEEECCCCH-H--HHHHHHHHHHCCCEEEEEECC
Confidence 467777755543 2 357899999999999887654
No 441
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Probab=38.88 E-value=26 Score=24.05 Aligned_cols=33 Identities=15% Similarity=0.090 Sum_probs=22.1
Q ss_pred eEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCC
Q 040291 5 HVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTD 40 (160)
Q Consensus 5 ~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~ 40 (160)
+.++++ ++.|-+ =..++++|+++|++|+++.-.
T Consensus 8 ~~vlVT-Gasggi--G~~~a~~l~~~G~~V~~~~r~ 40 (244)
T 1cyd_A 8 LRALVT-GAGKGI--GRDTVKALHASGAKVVAVTRT 40 (244)
T ss_dssp CEEEEE-STTSHH--HHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEe-CCCchH--HHHHHHHHHHCCCEEEEEeCC
Confidence 344555 344433 357899999999999887643
No 442
>1zoi_A Esterase; alpha/beta hydrolase fold; 1.60A {Pseudomonas putida} PDB: 4dgq_A
Probab=38.86 E-value=48 Score=22.81 Aligned_cols=32 Identities=9% Similarity=-0.087 Sum_probs=23.7
Q ss_pred EEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEe
Q 040291 6 VLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVN 38 (160)
Q Consensus 6 i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~ 38 (160)
|+++. +..++..-+..++..|+++|++|..+-
T Consensus 25 vvllH-G~~~~~~~w~~~~~~L~~~g~~vi~~D 56 (276)
T 1zoi_A 25 IHFHH-GWPLSADDWDAQLLFFLAHGYRVVAHD 56 (276)
T ss_dssp EEEEC-CTTCCGGGGHHHHHHHHHTTCEEEEEC
T ss_pred EEEEC-CCCcchhHHHHHHHHHHhCCCEEEEec
Confidence 44444 555666667888999999999998864
No 443
>3o74_A Fructose transport system repressor FRUR; dual transcriptional regulator, DNA, transcription; 2.00A {Pseudomonas putida} PDB: 3o75_A*
Probab=38.84 E-value=80 Score=21.67 Aligned_cols=31 Identities=6% Similarity=-0.023 Sum_probs=19.0
Q ss_pred CCccEEEecCCC---ccHHHHHHHhCCccEEEcc
Q 040291 106 EKLDCFIADGYM---AWSMEVAKKMNVRGALFWP 136 (160)
Q Consensus 106 ~~~d~vI~D~~~---~~~~~~A~~lgiP~i~~~~ 136 (160)
.++|.||.-... ......+.+.|+|+|.+..
T Consensus 57 ~~vdgiIi~~~~~~~~~~~~~~~~~~iPvV~~~~ 90 (272)
T 3o74_A 57 RRCDALFVASCLPPEDDSYRELQDKGLPVIAIDR 90 (272)
T ss_dssp TTCSEEEECCCCCSSCCHHHHHHHTTCCEEEESS
T ss_pred cCCCEEEEecCccccHHHHHHHHHcCCCEEEEcc
Confidence 467877765433 2234455667888887654
No 444
>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*
Probab=38.83 E-value=26 Score=24.08 Aligned_cols=34 Identities=18% Similarity=0.156 Sum_probs=23.3
Q ss_pred CeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCC
Q 040291 4 PHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTD 40 (160)
Q Consensus 4 ~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~ 40 (160)
.+.++++ ++.|-+ =..++++|+++|++|+++.-.
T Consensus 7 ~~~vlVt-Gasggi--G~~la~~l~~~G~~V~~~~r~ 40 (248)
T 2pnf_A 7 GKVSLVT-GSTRGI--GRAIAEKLASAGSTVIITGTS 40 (248)
T ss_dssp TCEEEET-TCSSHH--HHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEE-CCCchH--HHHHHHHHHHCCCEEEEEeCC
Confidence 3556666 334433 356889999999999987653
No 445
>2afh_E Nitrogenase iron protein 1; nitrogen fixation, iron-sulfur, metal-binding, molybdenum, oxidoreductase; HET: HCA CFN CLF PGE PG4 P6G 1PE; 2.10A {Azotobacter vinelandii} SCOP: c.37.1.10 PDB: 1g1m_A 1g5p_A 1m1y_E* 1m34_E* 1n2c_E* 1nip_A* 1fp6_A* 2afi_E* 2afk_E* 2nip_A 1de0_A 1xcp_A* 1xdb_A 1xd8_A 1xd9_A* 1g20_E* 1g21_E* 2c8v_A* 1rw4_A
Probab=38.67 E-value=43 Score=23.87 Aligned_cols=36 Identities=19% Similarity=0.241 Sum_probs=29.6
Q ss_pred eEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCC
Q 040291 5 HVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTD 40 (160)
Q Consensus 5 ~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~ 40 (160)
.|++..-+|.|=..-...||..|+++|++|.++=.+
T Consensus 4 vIavs~KGGvGKTT~a~nLA~~La~~G~rVlliD~D 39 (289)
T 2afh_E 4 QCAIYGKGGIGKSTTTQNLVAALAEMGKKVMIVGCD 39 (289)
T ss_dssp EEEEEECTTSSHHHHHHHHHHHHHHTTCCEEEEEEC
T ss_pred EEEEeCCCcCcHHHHHHHHHHHHHHCCCeEEEEecC
Confidence 355555677888899999999999999999987544
No 446
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=38.62 E-value=23 Score=24.33 Aligned_cols=32 Identities=25% Similarity=0.404 Sum_probs=22.5
Q ss_pred CeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCC
Q 040291 4 PHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTD 40 (160)
Q Consensus 4 ~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~ 40 (160)
++|+++-. |.+- ..+++.|+++||+|+++...
T Consensus 29 ~~I~iiG~---G~~G--~~la~~l~~~g~~V~~~~r~ 60 (215)
T 2vns_A 29 PKVGILGS---GDFA--RSLATRLVGSGFKVVVGSRN 60 (215)
T ss_dssp CCEEEECC---SHHH--HHHHHHHHHTTCCEEEEESS
T ss_pred CEEEEEcc---CHHH--HHHHHHHHHCCCEEEEEeCC
Confidence 56777743 4332 35788999999999987653
No 447
>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*
Probab=38.54 E-value=34 Score=25.41 Aligned_cols=35 Identities=17% Similarity=0.149 Sum_probs=23.7
Q ss_pred CCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCCC
Q 040291 3 RPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDY 41 (160)
Q Consensus 3 ~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~ 41 (160)
+++|+++ ++.|.+- ..++++|.++||+|+.+.-..
T Consensus 5 ~~~ilVt--GatG~iG--~~l~~~L~~~g~~V~~~~R~~ 39 (352)
T 1xgk_A 5 KKTIAVV--GATGRQG--ASLIRVAAAVGHHVRAQVHSL 39 (352)
T ss_dssp CCCEEEE--STTSHHH--HHHHHHHHHTTCCEEEEESCS
T ss_pred CCEEEEE--CCCCHHH--HHHHHHHHhCCCEEEEEECCC
Confidence 4556554 4445442 467899999999999887543
No 448
>1efv_B Electron transfer flavoprotein; electron transport, glutaric acidemia type II; HET: FAD AMP; 2.10A {Homo sapiens} SCOP: c.26.2.3 PDB: 1t9g_S* 2a1u_B* 2a1t_S*
Probab=38.54 E-value=44 Score=23.97 Aligned_cols=30 Identities=13% Similarity=0.015 Sum_probs=23.0
Q ss_pred CccEEEecCCCc------cHHHHHHHhCCccEEEcc
Q 040291 107 KLDCFIADGYMA------WSMEVAKKMNVRGALFWP 136 (160)
Q Consensus 107 ~~d~vI~D~~~~------~~~~~A~~lgiP~i~~~~ 136 (160)
+||+|+...-.. .+..+|++||+|.+...+
T Consensus 116 ~~dlVl~G~~s~d~d~~~v~p~lA~~L~~~~vt~v~ 151 (255)
T 1efv_B 116 KVDLVLLGKQAIDDDCNQTGQMTAGFLDWPQGTFAS 151 (255)
T ss_dssp TCSEEEEESCCTTTCCCCHHHHHHHHHTCCEEEEEE
T ss_pred CCCEEEEeCcccCCchhhHHHHHHHHhCCCcccceE
Confidence 689999665442 367899999999998654
No 449
>2q8p_A Iron-regulated surface determinant E; helical backbone metal receptor superfamily, metal transport; HET: HEM; 1.95A {Staphylococcus aureus subsp} PDB: 2q8q_A*
Probab=38.52 E-value=27 Score=24.47 Aligned_cols=32 Identities=13% Similarity=0.084 Sum_probs=20.7
Q ss_pred CCccEEEecCCCc-cHHHHHHHhCCccEEEccc
Q 040291 106 EKLDCFIADGYMA-WSMEVAKKMNVRGALFWPS 137 (160)
Q Consensus 106 ~~~d~vI~D~~~~-~~~~~A~~lgiP~i~~~~~ 137 (160)
-+||+||...... .....-++.|||++.+...
T Consensus 59 l~PDLIi~~~~~~~~~~~~L~~~gipvv~~~~~ 91 (260)
T 2q8p_A 59 LKPTHVLSVSTIKDEMQPFYKQLNMKGYFYDFD 91 (260)
T ss_dssp TCCSEEEEEGGGHHHHHHHHHHHTSCCEEECCS
T ss_pred cCCCEEEecCccCHHHHHHHHHcCCcEEEecCC
Confidence 3799999754321 1234456789999987543
No 450
>1o97_C Electron transferring flavoprotein beta-subunit; FAD binding; HET: AMP FAD; 1.6A {Methylophilus methylotrophus} SCOP: c.26.2.3 PDB: 1o95_C* 1o96_A* 1o94_C* 3clr_C* 3cls_C* 3clt_C* 3clu_C*
Probab=38.51 E-value=43 Score=24.10 Aligned_cols=30 Identities=20% Similarity=0.041 Sum_probs=23.2
Q ss_pred CccEEEecCCCc------cHHHHHHHhCCccEEEcc
Q 040291 107 KLDCFIADGYMA------WSMEVAKKMNVRGALFWP 136 (160)
Q Consensus 107 ~~d~vI~D~~~~------~~~~~A~~lgiP~i~~~~ 136 (160)
+||+|+...-.. .+..+|++||+|.+...+
T Consensus 112 ~~dlVl~G~~s~d~~~~~v~p~lA~~L~~~~vt~v~ 147 (264)
T 1o97_C 112 APDMVFAGVQSSDQAYASTGISVASYLNWPHAAVVA 147 (264)
T ss_dssp CCSEEEEESCCTTTCCCCHHHHHHHHHTCCEEEEEE
T ss_pred CCCEEEEcCCccCCchhhHHHHHHHHhCCCcccceE
Confidence 689999665442 467899999999998654
No 451
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=38.44 E-value=20 Score=29.49 Aligned_cols=32 Identities=28% Similarity=0.499 Sum_probs=24.0
Q ss_pred CeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCC
Q 040291 4 PHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTD 40 (160)
Q Consensus 4 ~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~ 40 (160)
.+|+++-.+..| +..|+.|+++||+||++-..
T Consensus 392 ~~VvIIGgG~AG-----l~aA~~La~~G~~V~liE~~ 423 (690)
T 3k30_A 392 ARVLVVGAGPSG-----LEAARALGVRGYDVVLAEAG 423 (690)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHHHTCEEEEECSS
T ss_pred ceEEEECCCHHH-----HHHHHHHHHCCCeEEEEecC
Confidence 467777655444 66788899999999998653
No 452
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=38.43 E-value=47 Score=23.51 Aligned_cols=35 Identities=20% Similarity=0.245 Sum_probs=24.3
Q ss_pred CCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCC
Q 040291 3 RPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTD 40 (160)
Q Consensus 3 ~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~ 40 (160)
+.++++++.++.| -=..++++|+++|++|.+....
T Consensus 26 ~~k~~lVTGas~G---IG~aia~~la~~G~~Vv~~~~~ 60 (267)
T 3u5t_A 26 TNKVAIVTGASRG---IGAAIAARLASDGFTVVINYAG 60 (267)
T ss_dssp -CCEEEEESCSSH---HHHHHHHHHHHHTCEEEEEESS
T ss_pred CCCEEEEeCCCCH---HHHHHHHHHHHCCCEEEEEcCC
Confidence 4567777755442 2357899999999999886443
No 453
>1zh2_A KDP operon transcriptional regulatory protein KDPE; two-component system, gene regulation, transcription factor, KDP potassium transport system; 2.00A {Escherichia coli} SCOP: c.23.1.1 PDB: 1zh4_A
Probab=38.43 E-value=35 Score=19.97 Aligned_cols=32 Identities=19% Similarity=0.137 Sum_probs=19.9
Q ss_pred CCccEEEecCCCcc--HHHHHHHh----CCccEEEccc
Q 040291 106 EKLDCFIADGYMAW--SMEVAKKM----NVRGALFWPS 137 (160)
Q Consensus 106 ~~~d~vI~D~~~~~--~~~~A~~l----giP~i~~~~~ 137 (160)
.+||++|.|...+. +..+.+++ .+|.+.+...
T Consensus 44 ~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~ii~~s~~ 81 (121)
T 1zh2_A 44 RKPDLIILDLGLPDGDGIEFIRDLRQWSAVPVIVLSAR 81 (121)
T ss_dssp HCCSEEEEESEETTEEHHHHHHHHHTTCCCCEEEEESC
T ss_pred CCCCEEEEeCCCCCCcHHHHHHHHHhCCCCcEEEEECC
Confidence 36899999976542 44444443 4677776543
No 454
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A
Probab=38.35 E-value=54 Score=23.14 Aligned_cols=34 Identities=18% Similarity=0.173 Sum_probs=24.3
Q ss_pred CeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCC
Q 040291 4 PHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTD 40 (160)
Q Consensus 4 ~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~ 40 (160)
.+.++++.++.| -=..++++|+++|++|.++...
T Consensus 27 gk~vlVTGas~g---IG~aia~~la~~G~~V~~~~r~ 60 (266)
T 3grp_A 27 GRKALVTGATGG---IGEAIARCFHAQGAIVGLHGTR 60 (266)
T ss_dssp TCEEEESSTTSH---HHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEeCCCcH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 467777755443 2357899999999999887543
No 455
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=38.32 E-value=52 Score=23.09 Aligned_cols=34 Identities=26% Similarity=0.244 Sum_probs=24.5
Q ss_pred CeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCC
Q 040291 4 PHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTD 40 (160)
Q Consensus 4 ~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~ 40 (160)
.++++++..+.| -=..++++|+++|++|.++.-.
T Consensus 8 ~k~~lVTGas~G---IG~aia~~l~~~G~~V~~~~r~ 41 (265)
T 3lf2_A 8 EAVAVVTGGSSG---IGLATVELLLEAGAAVAFCARD 41 (265)
T ss_dssp TCEEEEETCSSH---HHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEeCCCCh---HHHHHHHHHHHCCCEEEEEeCC
Confidence 467777755543 2367899999999999887543
No 456
>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=38.31 E-value=24 Score=24.30 Aligned_cols=35 Identities=14% Similarity=0.152 Sum_probs=22.7
Q ss_pred CCCCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeC
Q 040291 1 MNRPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNT 39 (160)
Q Consensus 1 m~~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~ 39 (160)
|+. +.++++..+ |- -=..++++|+++|++|+++.-
T Consensus 1 m~~-k~vlITGas-~g--IG~~~a~~l~~~G~~V~~~~r 35 (236)
T 1ooe_A 1 MSS-GKVIVYGGK-GA--LGSAILEFFKKNGYTVLNIDL 35 (236)
T ss_dssp -CC-EEEEEETTT-SH--HHHHHHHHHHHTTEEEEEEES
T ss_pred CCC-CEEEEECCC-cH--HHHHHHHHHHHCCCEEEEEec
Confidence 533 455555333 32 236789999999999998754
No 457
>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*
Probab=38.15 E-value=97 Score=21.34 Aligned_cols=33 Identities=18% Similarity=0.243 Sum_probs=21.6
Q ss_pred eEEEEcCCCCCChHHHHHHHHHHHhCCCE-EEEEeCC
Q 040291 5 HVLVLPIPAQGHVIPLLEFSQCLAKQGFR-VTFVNTD 40 (160)
Q Consensus 5 ~i~~~~~p~~GH~~P~l~la~~L~~rGh~-Vt~~~~~ 40 (160)
+.++++ ++.|- -=..++++|+++|++ |.++.-.
T Consensus 6 k~vlVt-Gas~g--IG~~~a~~l~~~G~~~v~~~~r~ 39 (254)
T 1sby_A 6 KNVIFV-AALGG--IGLDTSRELVKRNLKNFVILDRV 39 (254)
T ss_dssp CEEEEE-TTTSH--HHHHHHHHHHHTCCSEEEEEESS
T ss_pred cEEEEE-CCCCh--HHHHHHHHHHHCCCcEEEEEecC
Confidence 445555 33342 346789999999997 7776544
No 458
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=38.13 E-value=67 Score=22.85 Aligned_cols=34 Identities=21% Similarity=0.264 Sum_probs=24.1
Q ss_pred CeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCC
Q 040291 4 PHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTD 40 (160)
Q Consensus 4 ~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~ 40 (160)
.++++++.++. -+ =..++++|+++|++|.++.-.
T Consensus 29 gk~vlVTGas~-gI--G~aia~~la~~G~~V~~~~r~ 62 (277)
T 3gvc_A 29 GKVAIVTGAGA-GI--GLAVARRLADEGCHVLCADID 62 (277)
T ss_dssp TCEEEETTTTS-TH--HHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEECCCc-HH--HHHHHHHHHHCCCEEEEEeCC
Confidence 46777775443 33 257899999999999887543
No 459
>1efp_B ETF, protein (electron transfer flavoprotein); electron transport, glutaric acidemia type II; HET: FAD AMP; 2.60A {Paracoccus denitrificans} SCOP: c.26.2.3
Probab=38.03 E-value=43 Score=23.92 Aligned_cols=30 Identities=17% Similarity=0.019 Sum_probs=23.0
Q ss_pred CccEEEecCCCc------cHHHHHHHhCCccEEEcc
Q 040291 107 KLDCFIADGYMA------WSMEVAKKMNVRGALFWP 136 (160)
Q Consensus 107 ~~d~vI~D~~~~------~~~~~A~~lgiP~i~~~~ 136 (160)
+||+|+...-.. .+..+|++||+|.+...+
T Consensus 113 ~~dlVl~G~~s~d~~~~~v~p~lA~~L~~~~vt~v~ 148 (252)
T 1efp_B 113 GTELIIAGKQAIDNDMNATGQMLAAILGWAQATFAS 148 (252)
T ss_dssp TCSEEEEESCCTTTCCCCHHHHHHHHHTCEEEEEEE
T ss_pred CCCEEEEcCCccCCchhhHHHHHHHHhCCCccccEE
Confidence 689999665432 467899999999998654
No 460
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=37.97 E-value=39 Score=23.80 Aligned_cols=33 Identities=9% Similarity=0.059 Sum_probs=24.5
Q ss_pred CeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeC
Q 040291 4 PHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNT 39 (160)
Q Consensus 4 ~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~ 39 (160)
.++++++.++.| + =..++++|+++|++|.++.-
T Consensus 11 ~k~vlVTGas~G-I--G~aia~~la~~G~~V~~~~r 43 (262)
T 3ksu_A 11 NKVIVIAGGIKN-L--GALTAKTFALESVNLVLHYH 43 (262)
T ss_dssp TCEEEEETCSSH-H--HHHHHHHHTTSSCEEEEEES
T ss_pred CCEEEEECCCch-H--HHHHHHHHHHCCCEEEEEec
Confidence 467777765554 2 36789999999999998753
No 461
>1tht_A Thioesterase; 2.10A {Vibrio harveyi} SCOP: c.69.1.13
Probab=37.96 E-value=33 Score=24.72 Aligned_cols=33 Identities=12% Similarity=0.210 Sum_probs=25.9
Q ss_pred eEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEE
Q 040291 5 HVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFV 37 (160)
Q Consensus 5 ~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~ 37 (160)
..+++-.+..++..-+..+++.|+++|++|..+
T Consensus 36 ~~VvllHG~g~~~~~~~~~~~~L~~~G~~Vi~~ 68 (305)
T 1tht_A 36 NTILIASGFARRMDHFAGLAEYLSTNGFHVFRY 68 (305)
T ss_dssp CEEEEECTTCGGGGGGHHHHHHHHTTTCCEEEE
T ss_pred CEEEEecCCccCchHHHHHHHHHHHCCCEEEEe
Confidence 355566677777777889999999999988775
No 462
>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*
Probab=37.96 E-value=27 Score=24.56 Aligned_cols=33 Identities=15% Similarity=0.140 Sum_probs=22.5
Q ss_pred eEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCC
Q 040291 5 HVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTD 40 (160)
Q Consensus 5 ~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~ 40 (160)
+.++++..+ |-+ =..++++|+++|++|+++.-.
T Consensus 8 k~vlVTGas-~gI--G~~ia~~l~~~G~~V~~~~r~ 40 (260)
T 1nff_A 8 KVALVSGGA-RGM--GASHVRAMVAEGAKVVFGDIL 40 (260)
T ss_dssp CEEEEETTT-SHH--HHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEeCCC-CHH--HHHHHHHHHHCCCEEEEEeCC
Confidence 556666333 322 257899999999999887543
No 463
>2bon_A Lipid kinase; DAG kinase, transferase; 1.90A {Escherichia coli} SCOP: e.52.1.2 PDB: 2jgr_A 2p1r_A
Probab=37.86 E-value=57 Score=24.07 Aligned_cols=38 Identities=21% Similarity=0.190 Sum_probs=29.1
Q ss_pred CeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCCC
Q 040291 4 PHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDY 41 (160)
Q Consensus 4 ~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~ 41 (160)
.+++++-.|..|.-.-..++.+.|.++|+++.+..+..
T Consensus 30 ~~~~vi~Np~sg~~~~~~~i~~~l~~~g~~~~~~~t~~ 67 (332)
T 2bon_A 30 PASLLILNGKSTDNLPLREAIMLLREEGMTIHVRVTWE 67 (332)
T ss_dssp CCEEEEECSSSTTCHHHHHHHHHHHTTTCCEEEEECCS
T ss_pred ceEEEEECCCCCCCchHHHHHHHHHHcCCcEEEEEecC
Confidence 46777777777665556678889999999999887653
No 464
>2fb6_A Conserved hypothetical protein; structural genomics, PSI, protein STRU initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.46A {Bacteroides thetaiotaomicron}
Probab=37.82 E-value=39 Score=21.01 Aligned_cols=41 Identities=10% Similarity=0.048 Sum_probs=27.0
Q ss_pred CCeEEEEcCCCC-CCh-HHHHHHHHHHHhCC--CEEEEEeCCCCh
Q 040291 3 RPHVLVLPIPAQ-GHV-IPLLEFSQCLAKQG--FRVTFVNTDYDH 43 (160)
Q Consensus 3 ~~~i~~~~~p~~-GH~-~P~l~la~~L~~rG--h~Vt~~~~~~~~ 43 (160)
.++++++-+.+. -.. +-.+.+|....++| |+|+++-.....
T Consensus 7 ~~K~~ivi~s~d~~~~~~~al~~A~~a~~~G~~~eV~i~~~G~~v 51 (117)
T 2fb6_A 7 NDKLTILWTTDNKDTVFNMLAMYALNSKNRGWWKHINIILWGASV 51 (117)
T ss_dssp TSEEEEEECCCCHHHHHHTHHHHHHHHHHHTSCSEEEEEECSHHH
T ss_pred CCeEEEEEEcCChHHHHHHHHHHHHHHHHcCCCCcEEEEEECCee
Confidence 356666665543 222 34677888888888 899998765443
No 465
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=37.81 E-value=28 Score=24.40 Aligned_cols=33 Identities=18% Similarity=0.267 Sum_probs=23.0
Q ss_pred eEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCC
Q 040291 5 HVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTD 40 (160)
Q Consensus 5 ~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~ 40 (160)
+.++++.. .|-+ =..++++|+++|++|+++.-.
T Consensus 15 k~vlVTGa-s~gI--G~~ia~~l~~~G~~V~~~~r~ 47 (260)
T 2zat_A 15 KVALVTAS-TDGI--GLAIARRLAQDGAHVVVSSRK 47 (260)
T ss_dssp CEEEESSC-SSHH--HHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECC-CcHH--HHHHHHHHHHCCCEEEEEeCC
Confidence 56666643 3322 357899999999999987643
No 466
>1jfr_A Lipase; serine hydrolase; 1.90A {Streptomyces exfoliatus} SCOP: c.69.1.16
Probab=37.80 E-value=28 Score=23.98 Aligned_cols=35 Identities=23% Similarity=0.235 Sum_probs=27.3
Q ss_pred EEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCC
Q 040291 6 VLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTD 40 (160)
Q Consensus 6 i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~ 40 (160)
++++-.+..|+..-+..+++.|+++|+.|..+-..
T Consensus 56 ~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~d~~ 90 (262)
T 1jfr_A 56 AVVISPGFTAYQSSIAWLGPRLASQGFVVFTIDTN 90 (262)
T ss_dssp EEEEECCTTCCGGGTTTHHHHHHTTTCEEEEECCS
T ss_pred EEEEeCCcCCCchhHHHHHHHHHhCCCEEEEeCCC
Confidence 55555667777777888999999999998887654
No 467
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=37.77 E-value=48 Score=23.53 Aligned_cols=33 Identities=21% Similarity=0.194 Sum_probs=24.5
Q ss_pred CeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeC
Q 040291 4 PHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNT 39 (160)
Q Consensus 4 ~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~ 39 (160)
.++++++..+.| -=..++++|+++|++|.++.-
T Consensus 11 ~k~~lVTGas~g---IG~aia~~la~~G~~V~~~~~ 43 (286)
T 3uve_A 11 GKVAFVTGAARG---QGRSHAVRLAQEGADIIAVDI 43 (286)
T ss_dssp TCEEEEESTTSH---HHHHHHHHHHHTTCEEEEEEC
T ss_pred CCEEEEeCCCch---HHHHHHHHHHHCCCeEEEEec
Confidence 467777755543 236789999999999988743
No 468
>1tjy_A Sugar transport protein; protein-ligand complex, signaling protein; HET: PAV; 1.30A {Salmonella typhimurium} SCOP: c.93.1.1 PDB: 1tm2_A 3t95_A* 3ejw_A*
Probab=37.71 E-value=76 Score=22.71 Aligned_cols=31 Identities=13% Similarity=0.075 Sum_probs=21.4
Q ss_pred CCccEEEecCCCcc----HHHHHHHhCCccEEEcc
Q 040291 106 EKLDCFIADGYMAW----SMEVAKKMNVRGALFWP 136 (160)
Q Consensus 106 ~~~d~vI~D~~~~~----~~~~A~~lgiP~i~~~~ 136 (160)
.++|.||....... ....+.+.|||+|.+..
T Consensus 59 ~~vdgiii~~~~~~~~~~~~~~a~~~gipvV~~d~ 93 (316)
T 1tjy_A 59 QGYDAIIVSAVSPDGLCPALKRAMQRGVKILTWDS 93 (316)
T ss_dssp TTCSEEEECCSSSSTTHHHHHHHHHTTCEEEEESS
T ss_pred cCCCEEEEeCCCHHHHHHHHHHHHHCcCEEEEecC
Confidence 47899887665432 23456778999998754
No 469
>3m3p_A Glutamine amido transferase; structural genomics, nysgrc, PSI-2; HET: MSE; 1.30A {Methylobacillus flagellatus} PDB: 3l83_A*
Probab=37.66 E-value=46 Score=23.69 Aligned_cols=37 Identities=16% Similarity=0.159 Sum_probs=26.2
Q ss_pred CCCCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCC
Q 040291 1 MNRPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTD 40 (160)
Q Consensus 1 m~~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~ 40 (160)
|.+++|+++-.....+...+. +.|.++|++++++...
T Consensus 1 m~~~~vliiqh~~~e~~~~i~---~~l~~~G~~v~v~~~~ 37 (250)
T 3m3p_A 1 MSLKPVMIIQFSASEGPGHFG---DFLAGEHIPFQVLRMD 37 (250)
T ss_dssp -CCCCEEEEESSSSCCCHHHH---HHHHHTTCCEEEEEGG
T ss_pred CCCCeEEEEECCCCCCHHHHH---HHHHHCCCeEEEEecc
Confidence 677888888666656655544 4477899999998754
No 470
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=37.65 E-value=11 Score=27.91 Aligned_cols=36 Identities=17% Similarity=0.144 Sum_probs=26.2
Q ss_pred CCCCeEEEEcCCCCCChHHHHHHHHHHHhCC-------CEEEEEeCCC
Q 040291 1 MNRPHVLVLPIPAQGHVIPLLEFSQCLAKQG-------FRVTFVNTDY 41 (160)
Q Consensus 1 m~~~~i~~~~~p~~GH~~P~l~la~~L~~rG-------h~Vt~~~~~~ 41 (160)
|.+++|+++-.+..|. .+|+.|+++| |+|+++....
T Consensus 6 m~~mkI~iIG~G~mG~-----~~a~~l~~~g~~~~~~~~~V~~~~r~~ 48 (354)
T 1x0v_A 6 MASKKVCIVGSGNWGS-----AIAKIVGGNAAQLAQFDPRVTMWVFEE 48 (354)
T ss_dssp -CCEEEEEECCSHHHH-----HHHHHHHHHHHHCTTEEEEEEEECCCC
T ss_pred cCCCeEEEECCCHHHH-----HHHHHHHhcCCcccCCCCeEEEEEcCh
Confidence 5567888887655554 5688888888 9999986543
No 471
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=37.53 E-value=28 Score=24.17 Aligned_cols=33 Identities=27% Similarity=0.321 Sum_probs=22.4
Q ss_pred eEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCC
Q 040291 5 HVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTD 40 (160)
Q Consensus 5 ~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~ 40 (160)
+.++++.++ |-+ =..++++|+++|++|.++.-.
T Consensus 14 k~vlItGas-ggi--G~~la~~l~~~G~~V~~~~r~ 46 (260)
T 3awd_A 14 RVAIVTGGA-QNI--GLACVTALAEAGARVIIADLD 46 (260)
T ss_dssp CEEEEETTT-SHH--HHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEeCCC-chH--HHHHHHHHHHCCCEEEEEeCC
Confidence 455555333 322 357899999999999987653
No 472
>1u11_A PURE (N5-carboxyaminoimidazole ribonucleotide MUT; acidophIle, protein stability, lyase; HET: CIT; 1.55A {Acetobacter aceti} SCOP: c.23.8.1 PDB: 2fwj_A* 2fw1_A* 2fwb_A 2fwa_A 2fw9_A 2fw7_A 2fw6_A 2fwp_A* 2fwi_A* 2fw8_A
Probab=37.51 E-value=71 Score=21.80 Aligned_cols=44 Identities=14% Similarity=0.108 Sum_probs=31.4
Q ss_pred CCCCeEEEEcCCCCCChHHHHHHHHHHHhCC--CEEEEEeCCCChhh
Q 040291 1 MNRPHVLVLPIPAQGHVIPLLEFSQCLAKQG--FRVTFVNTDYDHKR 45 (160)
Q Consensus 1 m~~~~i~~~~~p~~GH~~P~l~la~~L~~rG--h~Vt~~~~~~~~~~ 45 (160)
|..++|+++. ++.+++--+.+.++.|.+-| ++|.+++.....++
T Consensus 19 ~~~~~V~Iim-GS~SD~~v~~~a~~~L~~~Gi~~dv~V~SaHR~p~~ 64 (182)
T 1u11_A 19 ASAPVVGIIM-GSQSDWETMRHADALLTELEIPHETLIVSAHRTPDR 64 (182)
T ss_dssp -CCCSEEEEE-SSGGGHHHHHHHHHHHHHTTCCEEEEECCTTTCHHH
T ss_pred cCCCEEEEEE-CcHHHHHHHHHHHHHHHHcCCCeEEEEEcccCCHHH
Confidence 3456677666 88899988888888888876 67777766554443
No 473
>3ju3_A Probable 2-oxoacid ferredoxin oxidoreductase, ALP; structural genomics, PSI-2, protein structu initiative; 1.90A {Thermoplasma acidophilum}
Probab=37.45 E-value=44 Score=20.70 Aligned_cols=37 Identities=14% Similarity=0.262 Sum_probs=27.9
Q ss_pred CCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCCC
Q 040291 3 RPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDY 41 (160)
Q Consensus 3 ~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~ 41 (160)
...+++++++.. ....++.++.|.+.|.+|+++....
T Consensus 13 g~dv~iv~~Gs~--~~~a~eA~~~L~~~Gi~v~vi~~r~ 49 (118)
T 3ju3_A 13 EADITFVTWGSQ--KGPILDVIEDLKEEGISANLLYLKM 49 (118)
T ss_dssp SCSEEEEEEGGG--HHHHHHHHHHHHHTTCCEEEEEECS
T ss_pred CCCEEEEEECcc--HHHHHHHHHHHHHCCCceEEEEECe
Confidence 456778876644 4667888889999999999987543
No 474
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=37.44 E-value=27 Score=25.00 Aligned_cols=32 Identities=25% Similarity=0.290 Sum_probs=24.3
Q ss_pred CeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCC
Q 040291 4 PHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTD 40 (160)
Q Consensus 4 ~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~ 40 (160)
++|.++-.+..| ..+++.|+++||+|+++...
T Consensus 2 ~~I~iiG~G~mG-----~~~a~~l~~~G~~V~~~dr~ 33 (287)
T 3pdu_A 2 TTYGFLGLGIMG-----GPMAANLVRAGFDVTVWNRN 33 (287)
T ss_dssp CCEEEECCSTTH-----HHHHHHHHHHTCCEEEECSS
T ss_pred CeEEEEccCHHH-----HHHHHHHHHCCCeEEEEcCC
Confidence 468888666666 35789999999999988654
No 475
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=37.39 E-value=50 Score=23.86 Aligned_cols=33 Identities=18% Similarity=0.226 Sum_probs=26.3
Q ss_pred CeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeC
Q 040291 4 PHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNT 39 (160)
Q Consensus 4 ~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~ 39 (160)
.|+++++..+.| ==..+|++|++.|.+|.++.-
T Consensus 29 gKvalVTGas~G---IG~aiA~~la~~Ga~V~i~~r 61 (273)
T 4fgs_A 29 AKIAVITGATSG---IGLAAAKRFVAEGARVFITGR 61 (273)
T ss_dssp TCEEEEESCSSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEeCcCCH---HHHHHHHHHHHCCCEEEEEEC
Confidence 479999977765 236789999999999987654
No 476
>2gwr_A DNA-binding response regulator MTRA; two-component regulatory system, transcription regulation, phosphorylation, OMPR family; 2.10A {Mycobacterium tuberculosis} PDB: 3nhz_A
Probab=37.30 E-value=32 Score=23.57 Aligned_cols=31 Identities=13% Similarity=0.164 Sum_probs=19.5
Q ss_pred CCccEEEecCCCcc--HHHHHHHh----CCccEEEcc
Q 040291 106 EKLDCFIADGYMAW--SMEVAKKM----NVRGALFWP 136 (160)
Q Consensus 106 ~~~d~vI~D~~~~~--~~~~A~~l----giP~i~~~~ 136 (160)
.+||+||.|...+. +..+++++ ++|++.+..
T Consensus 48 ~~~dlvilD~~l~~~~g~~~~~~lr~~~~~~ii~lt~ 84 (238)
T 2gwr_A 48 LRPDLVLLDLMLPGMNGIDVCRVLRADSGVPIVMLTA 84 (238)
T ss_dssp HCCSEEEEESSCSSSCHHHHHHHHHTTCCCCEEEEEE
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHhCCCCcEEEEeC
Confidence 36899999986643 44444333 678777654
No 477
>3g9k_S Capsule biosynthesis protein CAPD; CAPD protein, the great lakes regional C excellence, GLRCE, capsule biogenesis/degradation; HET: GLU; 1.79A {Bacillus anthracis} PDB: 3ga9_S*
Probab=37.18 E-value=22 Score=24.10 Aligned_cols=17 Identities=24% Similarity=0.317 Sum_probs=14.3
Q ss_pred HHHHHHHHhCCCEEEEE
Q 040291 21 LEFSQCLAKQGFRVTFV 37 (160)
Q Consensus 21 l~la~~L~~rGh~Vt~~ 37 (160)
-.+.++|.+|||+|...
T Consensus 124 ~~~~~~L~~~Gh~v~~~ 140 (177)
T 3g9k_S 124 SEVKNELSRKGLNVKKK 140 (177)
T ss_dssp HHHHHHHHTTTCEEEEC
T ss_pred HHHHHHHHHcCCeeEEC
Confidence 36789999999999764
No 478
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=37.12 E-value=31 Score=27.90 Aligned_cols=35 Identities=26% Similarity=0.264 Sum_probs=25.8
Q ss_pred CCCCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCC
Q 040291 1 MNRPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTD 40 (160)
Q Consensus 1 m~~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~ 40 (160)
|...+|+|+-.+..| +.+|..|+++|++|+++-..
T Consensus 21 M~~~DVvIVGgG~AG-----l~aA~~Lar~G~~V~LiEr~ 55 (591)
T 3i3l_A 21 MTRSKVAIIGGGPAG-----SVAGLTLHKLGHDVTIYERS 55 (591)
T ss_dssp CCCCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSS
T ss_pred CCCCCEEEECcCHHH-----HHHHHHHHcCCCCEEEEcCC
Confidence 455678888755444 56678899999999998544
No 479
>1xjc_A MOBB protein homolog; structural genomics, midwest center for structural GEN PSI, protein structure initiative, MCSG; 2.10A {Geobacillus stearothermophilus} SCOP: c.37.1.10
Probab=37.11 E-value=79 Score=21.02 Aligned_cols=37 Identities=16% Similarity=0.205 Sum_probs=31.1
Q ss_pred eEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCCC
Q 040291 5 HVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDY 41 (160)
Q Consensus 5 ~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~ 41 (160)
.+.++-+.+.|=..-...|+++|.++|.+|.++....
T Consensus 6 ~i~i~G~sGsGKTTl~~~L~~~l~~~g~~v~~ik~~~ 42 (169)
T 1xjc_A 6 VWQVVGYKHSGKTTLMEKWVAAAVREGWRVGTVKHHG 42 (169)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred EEEEECCCCCCHHHHHHHHHHhhHhcCCeeeEEEeCC
Confidence 4667777788998999999999999999999887654
No 480
>1a8q_A Bromoperoxidase A1; haloperoxidase, oxidoreductase; 1.75A {Streptomyces aureofaciens} SCOP: c.69.1.12
Probab=37.05 E-value=50 Score=22.60 Aligned_cols=32 Identities=9% Similarity=0.011 Sum_probs=23.5
Q ss_pred EEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEe
Q 040291 6 VLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVN 38 (160)
Q Consensus 6 i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~ 38 (160)
|+++ .+..++..-+..+++.|+++|++|..+-
T Consensus 22 vvll-HG~~~~~~~w~~~~~~l~~~g~~vi~~D 53 (274)
T 1a8q_A 22 VVFI-HGWPLNGDAWQDQLKAVVDAGYRGIAHD 53 (274)
T ss_dssp EEEE-CCTTCCGGGGHHHHHHHHHTTCEEEEEC
T ss_pred EEEE-CCCcchHHHHHHHHHHHHhCCCeEEEEc
Confidence 4444 4555666667888899999999988764
No 481
>3c3w_A Two component transcriptional regulatory protein; response regulator, two-component regulatory system, DNA-BIN protein; 2.20A {Mycobacterium tuberculosis}
Probab=37.01 E-value=29 Score=23.59 Aligned_cols=32 Identities=13% Similarity=0.234 Sum_probs=20.7
Q ss_pred CCccEEEecCCCcc--HHHHHHHh-----CCccEEEccc
Q 040291 106 EKLDCFIADGYMAW--SMEVAKKM-----NVRGALFWPS 137 (160)
Q Consensus 106 ~~~d~vI~D~~~~~--~~~~A~~l-----giP~i~~~~~ 137 (160)
.+||+||.|...+. +..+++++ ++|.+.+...
T Consensus 46 ~~~dlvllD~~lp~~~g~~~~~~lr~~~~~~~ii~lt~~ 84 (225)
T 3c3w_A 46 ARPDVAVLDVRLPDGNGIELCRDLLSRMPDLRCLILTSY 84 (225)
T ss_dssp HCCSEEEECSEETTEEHHHHHHHHHHHCTTCEEEEGGGS
T ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHhCCCCcEEEEECC
Confidence 46899999986643 44444433 5777776543
No 482
>3rht_A (gatase1)-like protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.83A {Planctomyces limnophilus}
Probab=36.96 E-value=27 Score=25.23 Aligned_cols=37 Identities=5% Similarity=0.067 Sum_probs=26.9
Q ss_pred CCeEEEEcCCCCCChH--HHHHHHHHHHhCCCEEEEEeCCCCh
Q 040291 3 RPHVLVLPIPAQGHVI--PLLEFSQCLAKQGFRVTFVNTDYDH 43 (160)
Q Consensus 3 ~~~i~~~~~p~~GH~~--P~l~la~~L~~rGh~Vt~~~~~~~~ 43 (160)
..+++++ .||-. -...|.+.|.+.|++|+++.+....
T Consensus 4 m~~vLiV----~g~~~~~~a~~l~~aL~~~g~~V~~i~~~~~~ 42 (259)
T 3rht_A 4 MTRVLYC----GDTSLETAAGYLAGLMTSWQWEFDYIPSHVGL 42 (259)
T ss_dssp --CEEEE----ESSCTTTTHHHHHHHHHHTTCCCEEECTTSCB
T ss_pred CceEEEE----CCCCchhHHHHHHHHHHhCCceEEEecccccc
Confidence 3578888 37743 4566888899999999999887653
No 483
>3heb_A Response regulator receiver domain protein (CHEY); NYSGXRC, PSI-II, respose regulator, structure initiative, structural genomics; 2.40A {Rhodospirillum rubrum} SCOP: c.23.1.0
Probab=36.91 E-value=74 Score=19.62 Aligned_cols=32 Identities=6% Similarity=0.040 Sum_probs=20.7
Q ss_pred CCccEEEecCCCcc--HHHHHHH-------hCCccEEEccc
Q 040291 106 EKLDCFIADGYMAW--SMEVAKK-------MNVRGALFWPS 137 (160)
Q Consensus 106 ~~~d~vI~D~~~~~--~~~~A~~-------lgiP~i~~~~~ 137 (160)
.+||+||.|...+. +..++++ -++|.+.+...
T Consensus 58 ~~~dliilD~~l~~~~g~~~~~~lr~~~~~~~~pii~~t~~ 98 (152)
T 3heb_A 58 GRAQLVLLDLNLPDMTGIDILKLVKENPHTRRSPVVILTTT 98 (152)
T ss_dssp TCBEEEEECSBCSSSBHHHHHHHHHHSTTTTTSCEEEEESC
T ss_pred CCCCEEEEeCCCCCCcHHHHHHHHHhcccccCCCEEEEecC
Confidence 57999999986643 4444432 35777777654
No 484
>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=36.90 E-value=29 Score=24.10 Aligned_cols=32 Identities=16% Similarity=0.152 Sum_probs=22.1
Q ss_pred eEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeC
Q 040291 5 HVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNT 39 (160)
Q Consensus 5 ~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~ 39 (160)
+.++++.++ |-+ =..++++|+++|++|+++.-
T Consensus 6 k~vlVTGas-~gi--G~~ia~~l~~~G~~V~~~~r 37 (245)
T 1uls_A 6 KAVLITGAA-HGI--GRATLELFAKEGARLVACDI 37 (245)
T ss_dssp CEEEEESTT-SHH--HHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCC-CHH--HHHHHHHHHHCCCEEEEEeC
Confidence 556666443 322 35688999999999998754
No 485
>1g3q_A MIND ATPase, cell division inhibitor; alpha-beta-alpha layered, protein-ADP complex, cell cycle, hydrolase; HET: ADP; 2.00A {Pyrococcus furiosus} SCOP: c.37.1.10 PDB: 1g3r_A* 1ion_A*
Probab=36.86 E-value=41 Score=22.97 Aligned_cols=36 Identities=19% Similarity=0.290 Sum_probs=28.9
Q ss_pred EEEEc-CCCCCChHHHHHHHHHHHhCCCEEEEEeCCC
Q 040291 6 VLVLP-IPAQGHVIPLLEFSQCLAKQGFRVTFVNTDY 41 (160)
Q Consensus 6 i~~~~-~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~ 41 (160)
|.++. -++.|=..-...||..|+++|.+|.++-.+.
T Consensus 5 i~v~s~kgGvGKTt~a~~LA~~la~~g~~VlliD~D~ 41 (237)
T 1g3q_A 5 ISIVSGKGGTGKTTVTANLSVALGDRGRKVLAVDGDL 41 (237)
T ss_dssp EEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred EEEecCCCCCCHHHHHHHHHHHHHhcCCeEEEEeCCC
Confidence 44433 5677888999999999999999999987654
No 486
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=36.85 E-value=31 Score=23.34 Aligned_cols=20 Identities=10% Similarity=0.207 Sum_probs=16.8
Q ss_pred HHHHHHHH-hCCCEEEEEeCC
Q 040291 21 LEFSQCLA-KQGFRVTFVNTD 40 (160)
Q Consensus 21 l~la~~L~-~rGh~Vt~~~~~ 40 (160)
..++++|+ ++|++|+.+.-.
T Consensus 19 ~~~~~~l~~~~g~~V~~~~r~ 39 (221)
T 3r6d_A 19 QXLTATLLTYTDMHITLYGRQ 39 (221)
T ss_dssp HHHHHHHHHHCCCEEEEEESS
T ss_pred HHHHHHHHhcCCceEEEEecC
Confidence 67899999 899999987654
No 487
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*
Probab=36.84 E-value=29 Score=23.97 Aligned_cols=33 Identities=18% Similarity=0.299 Sum_probs=22.8
Q ss_pred eEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCC
Q 040291 5 HVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTD 40 (160)
Q Consensus 5 ~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~ 40 (160)
+.++++. +.|-+ =..++++|+++|++|+++.-.
T Consensus 12 k~vlITG-asggi--G~~la~~l~~~G~~V~~~~r~ 44 (254)
T 2wsb_A 12 ACAAVTG-AGSGI--GLEICRAFAASGARLILIDRE 44 (254)
T ss_dssp CEEEEET-TTSHH--HHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEEC-CCcHH--HHHHHHHHHHCCCEEEEEeCC
Confidence 4556663 33322 357899999999999987643
No 488
>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}
Probab=36.79 E-value=29 Score=24.20 Aligned_cols=33 Identities=3% Similarity=0.025 Sum_probs=23.1
Q ss_pred eEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCC
Q 040291 5 HVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTD 40 (160)
Q Consensus 5 ~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~ 40 (160)
+.++++.++. -+ =..++++|+++|++|.++.-.
T Consensus 23 k~vlITGas~-gI--G~~la~~l~~~G~~V~~~~r~ 55 (251)
T 3orf_A 23 KNILVLGGSG-AL--GAEVVKFFKSKSWNTISIDFR 55 (251)
T ss_dssp CEEEEETTTS-HH--HHHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEECCCC-HH--HHHHHHHHHHCCCEEEEEeCC
Confidence 4566664443 22 368899999999999887644
No 489
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=36.72 E-value=53 Score=23.40 Aligned_cols=34 Identities=15% Similarity=0.093 Sum_probs=25.8
Q ss_pred CCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeC
Q 040291 3 RPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNT 39 (160)
Q Consensus 3 ~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~ 39 (160)
+.|+++++-++.| ==..+|++|+++|.+|.++.-
T Consensus 6 ~gKvalVTGas~G---IG~aiA~~la~~Ga~Vv~~~~ 39 (254)
T 4fn4_A 6 KNKVVIVTGAGSG---IGRAIAKKFALNDSIVVAVEL 39 (254)
T ss_dssp TTCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEeCCCCH---HHHHHHHHHHHcCCEEEEEEC
Confidence 4578888876665 246788999999999987654
No 490
>1n2z_A Vitamin B12 transport protein BTUF; HET: CNC PG4; 2.00A {Escherichia coli} SCOP: c.92.2.2 PDB: 2qi9_F* 4dbl_E 1n4a_A* 1n4d_A
Probab=36.61 E-value=59 Score=22.45 Aligned_cols=39 Identities=18% Similarity=0.117 Sum_probs=24.2
Q ss_pred HHHHHHHHHhcCCCCCccEEEecCC-Cc-cHHHHHHHhCCccEEEccc
Q 040291 92 KLEELIEDINSREDEKLDCFIADGY-MA-WSMEVAKKMNVRGALFWPS 137 (160)
Q Consensus 92 ~~~~ll~~l~~~~~~~~d~vI~D~~-~~-~~~~~A~~lgiP~i~~~~~ 137 (160)
.++.+++ -+||+||.... .. ....--++.|||++.+...
T Consensus 49 n~E~i~~-------l~PDLIi~~~~~~~~~~~~~L~~~gipvv~~~~~ 89 (245)
T 1n2z_A 49 NLERIVA-------LKPDLVIAWRGGNAERQVDQLASLGIKVMWVDAT 89 (245)
T ss_dssp CHHHHHH-------TCCSEEEECTTTSCHHHHHHHHHHTCCEEECCCC
T ss_pred CHHHHhc-------cCCCEEEEeCCCCcHHHHHHHHHCCCcEEEeCCC
Confidence 4566554 37999998532 11 2233445789999987643
No 491
>3bdi_A Uncharacterized protein TA0194; NP_393672.1, predicted CIB-like hydrolase, structural genomi center for structural genomics; HET: MSE; 1.45A {Thermoplasma acidophilum dsm 1728}
Probab=36.60 E-value=42 Score=21.67 Aligned_cols=36 Identities=11% Similarity=-0.014 Sum_probs=26.9
Q ss_pred eEEEEcCCCCCChHHHHH--HHHHHHhCCCEEEEEeCC
Q 040291 5 HVLVLPIPAQGHVIPLLE--FSQCLAKQGFRVTFVNTD 40 (160)
Q Consensus 5 ~i~~~~~p~~GH~~P~l~--la~~L~~rGh~Vt~~~~~ 40 (160)
..+++-.+..|+..-+.. +++.|+++|+.|..+...
T Consensus 28 ~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~ 65 (207)
T 3bdi_A 28 RSIALFHGYSFTSMDWDKADLFNNYSKIGYNVYAPDYP 65 (207)
T ss_dssp EEEEEECCTTCCGGGGGGGTHHHHHHTTTEEEEEECCT
T ss_pred CeEEEECCCCCCccccchHHHHHHHHhCCCeEEEEcCC
Confidence 355555566777777888 999999999988776544
No 492
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=36.60 E-value=30 Score=23.96 Aligned_cols=35 Identities=14% Similarity=0.211 Sum_probs=24.3
Q ss_pred CCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCC
Q 040291 3 RPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTD 40 (160)
Q Consensus 3 ~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~ 40 (160)
+.+.++++.++.| + =..++++|+++|++|.++.-.
T Consensus 13 ~~k~vlVTGas~g-I--G~~~a~~l~~~G~~V~~~~r~ 47 (249)
T 3f9i_A 13 TGKTSLITGASSG-I--GSAIARLLHKLGSKVIISGSN 47 (249)
T ss_dssp TTCEEEETTTTSH-H--HHHHHHHHHHTTCEEEEEESC
T ss_pred CCCEEEEECCCCh-H--HHHHHHHHHHCCCEEEEEcCC
Confidence 3456667644432 2 357899999999999987653
No 493
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*
Probab=36.58 E-value=30 Score=23.92 Aligned_cols=33 Identities=12% Similarity=0.213 Sum_probs=23.0
Q ss_pred eEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCC
Q 040291 5 HVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTD 40 (160)
Q Consensus 5 ~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~ 40 (160)
+.++++ ++.|-+ =..++++|+++|++|.++.-.
T Consensus 8 k~vlVT-Gasggi--G~~~a~~l~~~G~~V~~~~r~ 40 (258)
T 3afn_B 8 KRVLIT-GSSQGI--GLATARLFARAGAKVGLHGRK 40 (258)
T ss_dssp CEEEET-TCSSHH--HHHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEe-CCCChH--HHHHHHHHHHCCCEEEEECCC
Confidence 455565 344443 357899999999999987654
No 494
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=36.57 E-value=65 Score=25.30 Aligned_cols=38 Identities=13% Similarity=0.139 Sum_probs=31.1
Q ss_pred CCeEEEEcCCCCCCh-----HHHHHHHHHHHhCCCEEEEEeCC
Q 040291 3 RPHVLVLPIPAQGHV-----IPLLEFSQCLAKQGFRVTFVNTD 40 (160)
Q Consensus 3 ~~~i~~~~~p~~GH~-----~P~l~la~~L~~rGh~Vt~~~~~ 40 (160)
..+|++.-....... .|.+.++++|.++|.+|.++=+.
T Consensus 328 ~~~v~vlGlafK~~~dD~R~Sp~~~i~~~L~~~g~~v~~~DP~ 370 (478)
T 2y0c_A 328 GRTFAIWGLAFKPNTDDMREAPSRELIAELLSRGARIAAYDPV 370 (478)
T ss_dssp TCEEEEECCSSSSSCCCCTTCHHHHHHHHHHHTTCEEEEECTT
T ss_pred CCEEEEEecccCCCCCccccChHHHHHHHHHHCCCEEEEECCC
Confidence 567888887777665 49999999999999999886554
No 495
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=36.51 E-value=40 Score=26.27 Aligned_cols=32 Identities=22% Similarity=0.181 Sum_probs=0.0
Q ss_pred CCC-CeEEEEcCCCCCChHHHHHHHHHHHhC--CCEEEEE
Q 040291 1 MNR-PHVLVLPIPAQGHVIPLLEFSQCLAKQ--GFRVTFV 37 (160)
Q Consensus 1 m~~-~~i~~~~~p~~GH~~P~l~la~~L~~r--Gh~Vt~~ 37 (160)
|.+ ++|.++-.+..| ..+|..|+++ ||+|+++
T Consensus 2 M~~~mkI~VIG~G~mG-----~~lA~~La~~g~G~~V~~~ 36 (467)
T 2q3e_A 2 MFEIKKICCIGAGYVG-----GPTCSVIAHMCPEIRVTVV 36 (467)
T ss_dssp CCCCCEEEEECCSTTH-----HHHHHHHHHHCTTSEEEEE
T ss_pred CCCccEEEEECCCHHH-----HHHHHHHHhcCCCCEEEEE
No 496
>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A
Probab=36.37 E-value=30 Score=23.85 Aligned_cols=33 Identities=12% Similarity=0.157 Sum_probs=22.6
Q ss_pred eEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCC
Q 040291 5 HVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTD 40 (160)
Q Consensus 5 ~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~ 40 (160)
+.++++.+ .|-+ =..++++|+++|++|+++.-.
T Consensus 7 k~vlVtGa-sggi--G~~~a~~l~~~G~~V~~~~r~ 39 (251)
T 1zk4_A 7 KVAIITGG-TLGI--GLAIATKFVEEGAKVMITGRH 39 (251)
T ss_dssp CEEEETTT-TSHH--HHHHHHHHHHTTCEEEEEESC
T ss_pred cEEEEeCC-CChH--HHHHHHHHHHCCCEEEEEeCC
Confidence 45566633 3322 357899999999999887643
No 497
>2hy5_B Intracellular sulfur oxidation protein DSRF; DSRE, DSRF, sulfur, structural genomics, PSI, protein initiative, berkeley structural genomics center, BSGC, TRAN; 1.72A {Allochromatium vinosum} SCOP: c.114.1.1 PDB: 2hyb_B
Probab=36.26 E-value=49 Score=21.16 Aligned_cols=38 Identities=16% Similarity=0.043 Sum_probs=25.7
Q ss_pred eEE-EEcCCCCCChHH--HHHHHHHHHhCCCEEEEEeCCCC
Q 040291 5 HVL-VLPIPAQGHVIP--LLEFSQCLAKQGFRVTFVNTDYD 42 (160)
Q Consensus 5 ~i~-~~~~p~~GH~~P--~l~la~~L~~rGh~Vt~~~~~~~ 42 (160)
+++ ++..+-.|+... -++++.++++.||+|+++-..+-
T Consensus 7 k~~ivv~~~P~g~~~~~~al~~a~a~~a~~~~v~Vff~~DG 47 (136)
T 2hy5_B 7 KFMYLNRKAPYGTIYAWEALEVVLIGAAFDQDVCVLFLDDG 47 (136)
T ss_dssp EEEEEECSCTTTSSHHHHHHHHHHHHGGGCCEEEEEECGGG
T ss_pred EEEEEEeCCCCCcHHHHHHHHHHHHHHhCCCCEEEEEEhHH
Confidence 344 344444566544 47779999999999999766543
No 498
>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A
Probab=36.26 E-value=31 Score=23.83 Aligned_cols=33 Identities=12% Similarity=0.248 Sum_probs=22.0
Q ss_pred eEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCC
Q 040291 5 HVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTD 40 (160)
Q Consensus 5 ~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~ 40 (160)
+.++++..+ |-+ =..++++|+++|++|.++.-.
T Consensus 3 k~vlVTGas-~gi--G~~~a~~l~~~G~~V~~~~r~ 35 (239)
T 2ekp_A 3 RKALVTGGS-RGI--GRAIAEALVARGYRVAIASRN 35 (239)
T ss_dssp CEEEEETTT-SHH--HHHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEeCCC-cHH--HHHHHHHHHHCCCEEEEEeCC
Confidence 345555333 322 357899999999999887543
No 499
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=36.24 E-value=33 Score=24.55 Aligned_cols=31 Identities=16% Similarity=0.282 Sum_probs=23.1
Q ss_pred eEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCC
Q 040291 5 HVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTD 40 (160)
Q Consensus 5 ~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~ 40 (160)
+|.++-.+..|. .+++.|++.||+|+++...
T Consensus 2 ~i~iiG~G~mG~-----~~a~~l~~~g~~V~~~~~~ 32 (296)
T 2gf2_A 2 PVGFIGLGNMGN-----PMAKNLMKHGYPLIIYDVF 32 (296)
T ss_dssp CEEEECCSTTHH-----HHHHHHHHTTCCEEEECSS
T ss_pred eEEEEeccHHHH-----HHHHHHHHCCCEEEEEeCC
Confidence 577776655553 5788999999999987543
No 500
>3cnb_A DNA-binding response regulator, MERR family; signal receiver domain, DNA binding protein, protein structu initiative, PSI-2; 2.00A {Colwellia psychrerythraea}
Probab=36.23 E-value=55 Score=19.78 Aligned_cols=41 Identities=12% Similarity=0.068 Sum_probs=23.4
Q ss_pred HHHHHHHhcCCCCCccEEEecCCCcc--HHHHHHH-------hCCccEEEccc
Q 040291 94 EELIEDINSREDEKLDCFIADGYMAW--SMEVAKK-------MNVRGALFWPS 137 (160)
Q Consensus 94 ~~ll~~l~~~~~~~~d~vI~D~~~~~--~~~~A~~-------lgiP~i~~~~~ 137 (160)
.+.++.+.+ .+||+||.|..... +..+.++ -++|++.+...
T Consensus 44 ~~a~~~l~~---~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~ 93 (143)
T 3cnb_A 44 FDAGDLLHT---VKPDVVMLDLMMVGMDGFSICHRIKSTPATANIIVIAMTGA 93 (143)
T ss_dssp HHHHHHHHH---TCCSEEEEETTCTTSCHHHHHHHHHTSTTTTTSEEEEEESS
T ss_pred HHHHHHHHh---cCCCEEEEecccCCCcHHHHHHHHHhCccccCCcEEEEeCC
Confidence 344444433 46899999986542 3444333 24677776544
Done!